locus_tag old_locus_tag gene Name start end strand product note type ID NCBI M479_1 M479_1 M479_1 715 960 + winged helix-turn-helix DNA-binding family protein [K] COG3423 Predicted transcriptional regulator gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1 M479_10 M479_10 M479_10 16261 16764 + oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=M479_10 M479_100 M479_100 gltA gltA 103137 104417 - citrate (Si)-synthase cit_synth_I: citrate (Si)-synthase~[C] COG0372 Citrate synthase gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=M479_100 M479_1000 M479_1000 pheS pheS 1122887 1123870 + phenylalanine--tRNA ligase%2C alpha subunit pheS: phenylalanine--tRNA ligase%2C alpha subunit~[J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1000 M479_1001 M479_1001 pheT pheT 1123884 1126271 + phenylalanine--tRNA ligase%2C beta subunit pheT_bact: phenylalanine--tRNA ligase%2C beta subunit~[J] COG0072 Phenylalanyl-tRNA synthetase beta subunit gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1001 M479_1002 M479_1002 ihfA ihfA 1126276 1126572 + integration host factor%2C alpha subunit himA: integration host factor%2C alpha subunit~[L] COG0776 Bacterial nucleoid DNA-binding protein gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1002 M479_1003 M479_1003 M479_1003 1126906 1127364 + hypothetical protein conserved hypothetical protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1003 M479_1004 M479_1004 M479_1004 1127591 1128598 + fecCD transport family protein [H] COG4139 ABC-type cobalamin transport system%2C permease component gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1004 M479_1005 M479_1005 M479_1005 1128668 1129222 + glutathione peroxidase family protein [O] COG0386 Glutathione peroxidase gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1005 M479_1006 M479_1006 M479_1006 1129247 1130005 + ABC transporter family protein [H] COG4138 ABC-type cobalamin transport system%2C ATPase component gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1006 M479_1007 M479_1007 M479_1007 1130355 1131509 + beta-eliminating lyase family protein [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1007 M479_1008 M479_1008 arnC arnC 1131496 1132479 + undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1008 M479_1009 M479_1009 M479_1009 1132476 1134479 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1009 M479_101 M479_101 sdhC sdhC 105301 105516 + succinate dehydrogenase%2C cytochrome b556 subunit succ_dehyd_cytB: succinate dehydrogenase%2C cytochrome b556 subunit~[C] COG2009 Succinate dehydrogenase/fumarate reductase%2C cytochrome b subunit gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=M479_101 M479_1010 M479_1010 M479_1010 1134476 1135381 + polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1010 M479_1011 M479_1011 M479_1011 1135378 1137042 + dolichyl-phosphate-mannose-mannosyltransferase family protein [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1011 M479_1012 M479_1012 M479_1012 1137039 1137383 + small Multidrug Resistance family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1012 M479_1013 M479_1013 M479_1013 1137380 1137766 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1013 M479_1014 M479_1014 M479_1014 1138079 1138510 + nlpC/P60 family protein [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1014 M479_1015 M479_1015 lplA lplA 1138635 1139651 + lipoate-protein ligase A [H] COG0095 Lipoate-protein ligase A gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1015 M479_1016 M479_1016 M479_1016 1139715 1141166 + hypothetical protein conserved hypothetical protein~[S] COG0397 Uncharacterized conserved protein gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1016 M479_1017 M479_1017 M479_1017 1141335 1142381 - 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1017 M479_1018 M479_1018 M479_1018 1142538 1143359 - putative phosphotransferase ydiA [S] COG1806 Uncharacterized protein conserved in bacteria gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1018 M479_1019 M479_1019 ppsA ppsA 1143658 1146042 + phosphoenolpyruvate synthase PEP_synth: phosphoenolpyruvate synthase~[G] COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1019 M479_102 M479_102 sdhD sdhD 105510 105857 + succinate dehydrogenase%2C hydrophobic membrane anchor protein succ_dehyd_anc: succinate dehydrogenase%2C hydrophobic membrane anchor protein~[C] COG2142 Succinate dehydrogenase%2C hydrophobic anchor subunit gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=M479_102 M479_1020 M479_1020 M479_1020 1146642 1147745 - hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1020 M479_1021 M479_1021 M479_1021 1148366 1151422 + hypothetical protein FAD linked oxidase%2C C-terminal domain protein~[C] COG0277 FAD/FMN-containing dehydrogenases gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1021 M479_1022 M479_1022 M479_1022 1151544 1151960 + hypothetical protein conserved hypothetical protein~[Q] COG2050 Uncharacterized protein%2C possibly involved in aromatic compounds catabolism gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1022 M479_1023 M479_1023 M479_1023 1152576 1152947 + iron-sulfur cluster assembly accessory family protein [S] COG0316 Uncharacterized conserved protein gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1023 M479_1024 M479_1024 sufB sufB 1152962 1154473 + FeS assembly protein SufB sufB: FeS assembly protein SufB~[O] COG0719 ABC-type transport system involved in Fe-S cluster assembly%2C permease component gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1024 M479_1025 M479_1025 sufC sufC 1154659 1155405 + FeS assembly ATPase SufC sufC: FeS assembly ATPase SufC~[O] COG0396 ABC-type transport system involved in Fe-S cluster assembly%2C ATPase component gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1025 M479_1026 M479_1026 sufD sufD 1155380 1156705 + FeS assembly protein SufD sufD: FeS assembly protein SufD~[O] COG0719 ABC-type transport system involved in Fe-S cluster assembly%2C permease component gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1026 M479_1027 M479_1027 sufS sufS 1156702 1157922 + cysteine desulfurase%2C SufS family protein sufS: cysteine desulfurase%2C SufS family protein~[E] COG0520 Selenocysteine lyase gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1027 M479_1028 M479_1028 sufE sufE 1158011 1158433 + cysteine desulfuration protein sufE [R] COG2166 SufE protein probably involved in Fe-S center assembly gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1028 M479_1029 M479_1029 M479_1029 1158704 1159723 + L%2CD-transpeptidase catalytic domain protein [S] COG1376 Uncharacterized protein conserved in bacteria gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1029 M479_103 M479_103 sdhA sdhA 105858 107624 + succinate dehydrogenase%2C flavoprotein subunit sdhA_forward: succinate dehydrogenase%2C flavoprotein subunit~[C] COG1053 Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=M479_103 M479_1030 M479_1030 M479_1030 1159767 1160429 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1030 M479_1031 M479_1031 M479_1031 1160401 1161567 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1031 M479_1032 M479_1032 M479_1032 1162149 1162607 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1032 M479_1033 M479_1033 lpp lpp 1162798 1163034 - major outer membrane lipoprotein Lpp [M] COG4238 Murein lipoprotein gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1033 M479_1034 M479_1034 pyk pyk 1163355 1164767 - pyruvate kinase pyruv_kin: pyruvate kinase~[G] COG0469 Pyruvate kinase gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1034 M479_1035 M479_1035 M479_1035 1165343 1165419 - tRNA-Val tRNA gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1035 M479_1036 M479_1036 M479_1036 1165479 1165555 - tRNA-Val tRNA gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1036 M479_1037 M479_1037 M479_1037 1165798 1167171 - MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1037 M479_1038 M479_1038 ribE ribE 1167420 1168076 + riboflavin synthase%2C alpha subunit ribE: riboflavin synthase%2C alpha subunit~[H] COG0307 Riboflavin synthase alpha chain gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1038 M479_1039 M479_1039 cfa cfa 1168127 1169278 - cyclopropane-fatty-acyl-phospholipid synthase [M] COG2230 Cyclopropane fatty acid synthase and related methyltransferases gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1039 M479_104 M479_104 M479_104 107674 108390 + succinate dehydrogenase and fumarate reductase iron-sulfur family protein dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein~[C] COG0479 Succinate dehydrogenase/fumarate reductase%2C Fe-S protein subunit gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=M479_104 M479_1040 M479_1040 M479_1040 1169758 1170960 - drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1040 M479_1041 M479_1041 M479_1041 1171250 1172182 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1041 M479_1042 M479_1042 M479_1042 1172271 1173296 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1042 M479_1043 M479_1043 M479_1043 1173630 1173719 + putative membrane protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1043 M479_1044 M479_1044 sodB sodB 1173823 1174401 - superoxide dismutase [Fe] [P] COG0605 Superoxide dismutase gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1044 M479_1045 M479_1045 M479_1045 1174779 1175630 - nlpC/P60 family protein [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1045 M479_1046 M479_1046 M479_1046 1175749 1175970 + hypothetical protein conserved hypothetical protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1046 M479_1047 M479_1047 grxD grxD 1176070 1176420 + monothiol glutaredoxin%2C Grx4 family [O] COG0278 Glutaredoxin-related protein gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1047 M479_1048 M479_1048 rnt rnt 1176729 1177376 - ribonuclease T RNaseT: ribonuclease T~[L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1048 M479_1049 M479_1049 gloA gloA 1177488 1177895 - lactoylglutathione lyase glyox_I: lactoylglutathione lyase~[E] COG0346 Lactoylglutathione lyase and related lyases gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1049 M479_105 M479_105 sucA sucA 108746 111553 + oxoglutarate dehydrogenase (succinyl-transferring)%2C E1 component 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring)%2C E1 component~[C] COG0567 2-oxoglutarate dehydrogenase complex%2C dehydrogenase (E1) component%2C and related enzymes gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=M479_105 M479_1050 M479_1050 M479_1050 1178168 1181122 + RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1050 M479_1051 M479_1051 M479_1051 1181343 1182440 - flavin oxidoreductase / NADH oxidase family protein NADH:flavin oxidoreductase / NADH oxidase family protein~[C] COG1902 NADH:flavin oxidoreductases%2C Old Yellow Enzyme family gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1051 M479_1052 M479_1052 nemR nemR 1182528 1183127 - HTH-type transcriptional repressor nemR [K] COG1309 Transcriptional regulator gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1052 M479_1053 M479_1053 M479_1053 1183350 1184987 - hypothetical protein conserved hypothetical protein~[R] COG2194 Predicted membrane-associated%2C metal-dependent hydrolase gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1053 M479_1054 M479_1054 M479_1054 1185161 1185400 + hypothetical protein conserved hypothetical protein~[R] COG3313 Predicted Fe-S protein gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1054 M479_1055 M479_1055 M479_1055 1185532 1186428 + aldo/keto reductase family protein [R] COG4989 Predicted oxidoreductase gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1055 M479_1056 M479_1056 slyB slyB 1187397 1187864 - outer membrane lipoprotein slyB [M] COG3133 Outer membrane lipoprotein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1056 M479_1057 M479_1057 M479_1057 1188420 1189532 + hypothetical protein conserved hypothetical protein~[O] COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1057 M479_1058 M479_1058 M479_1058 1189590 1189904 + membrane-bound lysozyme-inhibitor of c-type lysozyme family protein [R] COG3895 Predicted periplasmic protein gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1058 M479_1059 M479_1059 pdxH pdxH 1189995 1190648 + pyridoxamine 5'-phosphate oxidase pdxH: pyridoxamine 5'-phosphate oxidase~[H] COG0259 Pyridoxamine-phosphate oxidase gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1059 M479_106 M479_106 sucB sucB 111583 112806 + dihydrolipoyllysine-residue succinyltransferase%2C E2 component of oxoglutarate dehydrogenase complex sucB: dihydrolipoyllysine-residue succinyltransferase%2C E2 component of oxoglutarate dehydrogenase complex~[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase (E2) component%2C and related enzymes gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=M479_106 M479_1060 M479_1060 tyrS tyrS 1190830 1192104 + tyrosine--tRNA ligase tyrS: tyrosine--tRNA ligase~[J] COG0162 Tyrosyl-tRNA synthetase gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1060 M479_1061 M479_1061 M479_1061 1192259 1193119 + pyridoxal kinase pyridox_kin: pyridoxal kinase~[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1061 M479_1062 M479_1062 gstB gstB 1193179 1193784 - glutathione S-transferase GST-6.0 [O] COG0625 Glutathione S-transferase gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1062 M479_1063 M479_1063 M479_1063 1194029 1194292 - hypothetical protein conserved hypothetical protein gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1063 M479_1064 M479_1064 M479_1064 1194538 1195128 - yip1 domain protein gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1064 M479_1065 M479_1065 M479_1065 1195383 1196882 - amino acid/peptide transporter family protein yjdL_sub1_fam: amino acid/peptide transporter family protein~[E] COG3104 Dipeptide/tripeptide permease gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1065 M479_1066 M479_1066 M479_1066 1197065 1197154 + putative membrane protein gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1066 M479_1067 M479_1067 M479_1067 1197525 1198805 - hypothetical protein conserved hypothetical protein~[S] COG4950 Uncharacterized protein conserved in bacteria gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1067 M479_1068 M479_1068 sapF sapF 1199195 1200010 - peptide transport system ATP-binding protein SapF [V] COG4167 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1068 M479_1069 M479_1069 M479_1069 1200010 1201002 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[V] COG4170 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1069 M479_107 M479_107 sucC sucC 112919 114085 + succinyl-CoA ligase [ADP-forming] subunit beta [C] COG0045 Succinyl-CoA synthetase%2C beta subunit gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=M479_107 M479_1070 M479_1070 sapC sapC 1201002 1201892 - peptide transport system permease protein sapC [V] COG4171 ABC-type antimicrobial peptide transport system%2C permease component gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1070 M479_1071 M479_1071 sapB sapB 1201879 1202844 - peptide transport system permease protein sapB [V] COG4168 ABC-type antimicrobial peptide transport system%2C permease component gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1071 M479_1072 M479_1072 M479_1072 1202841 1204487 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1072 M479_1073 M479_1073 M479_1073 1205186 1205644 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1073 M479_1074 M479_1074 pspF pspF 1205809 1206837 - psp operon transcriptional activator phageshock_pspF: psp operon transcriptional activator~[KT] COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1074 M479_1075 M479_1075 pspA pspA 1207082 1207747 + phage shock protein A phageshock_pspA: phage shock protein A~[KT] COG1842 Phage shock protein A (IM30)%2C suppresses sigma54-dependent transcription gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1075 M479_1076 M479_1076 pspB pspB 1207909 1208136 + phage shock protein B phageshock_pspB: phage shock protein B gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1076 M479_1077 M479_1077 pspC pspC 1208136 1208495 + phage shock protein C phageshock_pspC: phage shock protein C~[KT] COG1983 Putative stress-responsive transcriptional regulator gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1077 M479_1078 M479_1078 M479_1078 1208580 1208822 + phage shock PspD family protein gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1078 M479_1079 M479_1079 M479_1079 1208803 1210200 + hypothetical protein conserved hypothetical protein~[R] COG3106 Predicted ATPase gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1079 M479_108 M479_108 sucD sucD 114085 114957 + succinate-CoA ligase%2C alpha subunit sucCoAalpha: succinate-CoA ligase%2C alpha subunit~[C] COG0074 Succinyl-CoA synthetase%2C alpha subunit gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=M479_108 M479_1080 M479_1080 M479_1080 1210197 1211258 + hypothetical protein conserved hypothetical protein~[S] COG3768 Predicted membrane protein gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1080 M479_1081 M479_1081 M479_1081 1211268 1211726 - RES domain protein [S] COG5654 Uncharacterized conserved protein gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1081 M479_1082 M479_1082 M479_1082 1211822 1212268 - hypothetical protein conserved hypothetical protein~[S] COG5642 Uncharacterized conserved protein gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1082 M479_1083 M479_1083 tyrR tyrR 1212604 1214181 + transcriptional regulatory protein tyrR [KE] COG3283 Transcriptional regulator of aromatic amino acids metabolism gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1083 M479_1084 M479_1084 M479_1084 1214328 1214786 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1084 M479_1085 M479_1085 M479_1085 1214935 1215120 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1085 M479_1086 M479_1086 M479_1086 1215117 1215227 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1086 M479_1087 M479_1087 M479_1087 1215227 1215712 - phoH-like family protein [L] COG1484 DNA replication protein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1087 M479_1088 M479_1088 M479_1088 1215780 1216733 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1088 M479_1089 M479_1089 tpx tpx 1216995 1217498 - thiol peroxidase [O] COG2077 Peroxiredoxin gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1089 M479_109 M479_109 M479_109 115171 115629 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=M479_109 M479_1090 M479_1090 M479_1090 1217661 1218635 + hypothetical protein mandelate racemase / muconate lactonizing enzyme%2C N-terminal domain protein~[MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1090 M479_1091 M479_1091 M479_1091 1218677 1219384 - zinc carboxypeptidase family protein [E] COG2866 Predicted carboxypeptidase gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1091 M479_1092 M479_1092 M479_1092 1219825 1221441 + bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1092 M479_1093 M479_1093 M479_1093 1221684 1222667 + corA-like Mg2+ transporter family protein [P] COG0598 Mg2+ and Co2+ transporters gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1093 M479_1094 M479_1094 M479_1094 1223041 1223880 - merR regulatory family protein [K] COG0789 Predicted transcriptional regulators gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1094 M479_1095 M479_1095 M479_1095 1224192 1225196 - alpha/beta hydrolase fold family protein [I] COG0657 Esterase/lipase gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1095 M479_1096 M479_1096 M479_1096 1224084 1224293 + hypothetical protein conserved hypothetical protein gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1096 M479_1097 M479_1097 M479_1097 1225467 1226408 - PP-loop family protein [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1097 M479_1098 M479_1098 nifJ nifJ 1226683 1230216 - ferredoxin (flavodoxin) oxidoreductase pyruvate:ferredoxin (flavodoxin) oxidoreductase~pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase~[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C gamma subunit gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1098 M479_1099 M479_1099 M479_1099 1230695 1231027 + small Multidrug Resistance family protein [P] COG2076 Membrane transporters of cations and cationic drugs gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1099 M479_11 M479_11 M479_11 16727 17245 + hypothetical protein oxidoreductase family%2C C-terminal alpha/beta domain protein~[R] COG0673 Predicted dehydrogenases and related proteins gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=M479_11 M479_110 M479_110 cydA cydA 116435 118003 + cytochrome d ubiquinol oxidase subunit 1 [C] COG1271 Cytochrome bd-type quinol oxidase%2C subunit 1 gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=M479_110 M479_1100 M479_1100 M479_1100 1231087 1231746 - mgtC family protein [S] COG1285 Uncharacterized membrane protein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1100 M479_1101 M479_1101 M479_1101 1232031 1232372 + hypothetical protein conserved hypothetical protein~[R] COG3042 Putative hemolysin gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1101 M479_1102 M479_1102 hslJ hslJ 1232430 1232882 - heat shock protein hslJ [O] COG3187 Heat shock protein gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1102 M479_1103 M479_1103 M479_1103 1232952 1233944 - D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1103 M479_1104 M479_1104 M479_1104 1234210 1236906 + dicarboxylate transport family protein gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1104 M479_1105 M479_1105 M479_1105 1236903 1237097 + ynbE-like lipofamily protein gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1105 M479_1106 M479_1106 M479_1106 1237173 1237478 + hypothetical protein conserved hypothetical protein~[S] COG3784 Uncharacterized protein conserved in bacteria gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1106 M479_1107 M479_1107 M479_1107 1237679 1239040 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1107 M479_1108 M479_1108 M479_1108 1239280 1240236 + putative sugar-binding domain protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1108 M479_1109 M479_1109 M479_1109 1240357 1240962 - NADPH-dependent FMN reductase family protein [I] COG1182 Acyl carrier protein phosphodiesterase gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1109 M479_111 M479_111 cydB cydB 118018 119157 + cytochrome d ubiquinol oxidase%2C subunit II cydB: cytochrome d ubiquinol oxidase%2C subunit II~[C] COG1294 Cytochrome bd-type quinol oxidase%2C subunit 2 gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=M479_111 M479_1110 M479_1110 hrpA hrpA 1241385 1245272 + RNA helicase HrpA DEAH_box_HrpA: RNA helicase HrpA~[L] COG1643 HrpA-like helicases gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1110 M479_1111 M479_1111 M479_1111 1245611 1245940 + hypothetical protein conserved hypothetical protein~[S] COG4679 Phage-related protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1111 M479_1112 M479_1112 M479_1112 1245937 1246260 + helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1112 M479_1113 M479_1113 M479_1113 1246316 1247152 - trypsin family protein [E] COG3591 V8-like Glu-specific endopeptidase gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1113 M479_1114 M479_1114 M479_1114 1247486 1247782 - putative acid shock protein 1 gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1114 M479_1115 M479_1115 M479_1115 1248386 1248940 + prokaryotic cytochrome b561 family protein [C] COG3038 Cytochrome B561 gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1115 M479_1116 M479_1116 M479_1116 1248966 1249544 + yceI-like domain protein [S] COG2353 Uncharacterized conserved protein gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1116 M479_1117 M479_1117 M479_1117 1250371 1250661 - hypothetical protein conserved hypothetical protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1117 M479_1118 M479_1118 M479_1118 1250730 1253354 - RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1118 M479_1119 M479_1119 M479_1119 1254324 1254782 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1119 M479_112 M479_112 M479_112 119170 119304 + cyd operon protein YbgT cyd_oper_ybgT: cyd operon protein YbgT~[S] COG4890 Predicted outer membrane lipoprotein gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=M479_112 M479_1120 M479_1120 M479_1120 1254904 1256403 - carboxypeptidase Taq (M32) metallopeptidase family protein [E] COG2317 Zn-dependent carboxypeptidase gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1120 M479_1121 M479_1121 M479_1121 1256497 1257753 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1121 M479_1122 M479_1122 M479_1122 1257802 1258548 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1122 M479_1123 M479_1123 M479_1123 1258845 1259261 + hypothetical protein conserved hypothetical protein gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1123 M479_1124 M479_1124 M479_1124 1259285 1260676 - putative arginine/ornithine antiporter [E] COG0531 Amino acid transporters gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1124 M479_1125 M479_1125 ydgH ydgH 1260946 1261899 - protein ydgH gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1125 M479_1126 M479_1126 pntA pntA 1262429 1263955 + NAD(P)(+) transhydrogenase (AB-specific)%2C alpha subunit pntA: NAD(P)(+) transhydrogenase (AB-specific)%2C alpha subunit~[C] COG3288 NAD/NADP transhydrogenase alpha subunit gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1126 M479_1127 M479_1127 pntB pntB 1264028 1265422 + NAD(P) transhydrogenase subunit beta [C] COG1282 NAD/NADP transhydrogenase beta subunit gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1127 M479_1128 M479_1128 M479_1128 1265697 1266653 - universal stress family protein [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1128 M479_1129 M479_1129 fnr fnr 1266788 1267540 - fumarate and nitrate reduction regulatory protein [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1129 M479_113 M479_113 M479_113 119294 119581 + cyd operon protein YbgE cyd_oper_ybgE: cyd operon protein YbgE~[S] COG3790 Predicted membrane protein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=M479_113 M479_1130 M479_1130 M479_1130 1267613 1268131 - methylated-DNA--[]-cysteine S-methyltransferase family protein ogt: methylated-DNA--[]-cysteine S-methyltransferase family protein~[L] COG0350 Methylated DNA-protein cysteine methyltransferase gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1130 M479_1131 M479_1131 M479_1131 1268372 1269817 + alkaline phosphatase family protein [P] COG1785 Alkaline phosphatase gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1131 M479_1132 M479_1132 M479_1132 1270363 1272759 + terB-N family protein gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1132 M479_1133 M479_1133 M479_1133 1272890 1273564 + noncanonical pyrimidine nucleotidase%2C YjjG family yjjG/YfnB: noncanonical pyrimidine nucleotidase%2C YjjG family~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1133 M479_1134 M479_1134 ilvN ilvN 1273631 1273978 - acetolactate synthase isozyme 1 small subunit [E] COG0440 Acetolactate synthase%2C small (regulatory) subunit gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1134 M479_1135 M479_1135 ilvB ilvB 1273980 1275647 - acetolactate synthase%2C large subunit%2C biosynthetic type acolac_lg: acetolactate synthase%2C large subunit%2C biosynthetic type~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1135 M479_1136 M479_1136 M479_1136 1276291 1277085 + hypothetical protein conserved hypothetical protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1136 M479_1137 M479_1137 M479_1137 1277254 1278897 - bacterial virulence factor family protein [S] COG4458 Uncharacterized protein conserved in bacteria%2C putative virulence factor gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1137 M479_1138 M479_1138 M479_1138 1278948 1279793 - bacterial virulence factor family protein [S] COG4458 Uncharacterized protein conserved in bacteria%2C putative virulence factor gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1138 M479_1139 M479_1139 M479_1139 1279790 1282861 - virulence factor SrfB family protein [S] COG4457 Uncharacterized protein conserved in bacteria%2C putative virulence factor gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1139 M479_114 M479_114 ybgC ybgC 119713 120114 + tol-pal system-associated acyl-CoA thioesterase thio_ybgC: tol-pal system-associated acyl-CoA thioesterase~[R] COG0824 Predicted thioesterase gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=M479_114 M479_1140 M479_1140 M479_1140 1282866 1284299 - putative virulence effector protein SrfA gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1140 M479_1141 M479_1141 amn amn 1284505 1285995 + AMP nucleosidase AMP-nucleosdse: AMP nucleosidase~[F] COG0775 Nucleoside phosphorylase gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1141 M479_1142 M479_1142 M479_1142 1286420 1287238 - ABC transporter family protein [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system%2C ATPase component gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1142 M479_1143 M479_1143 M479_1143 1287248 1288027 - binding--dependent transport system inner membrane component family protein [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1143 M479_1144 M479_1144 M479_1144 1288073 1289104 - bacterial extracellular solute-binding s%2C 3 family protein [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems%2C periplasmic components gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1144 M479_1145 M479_1145 M479_1145 1289543 1289893 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1145 M479_1146 M479_1146 M479_1146 1290037 1290507 + hypothetical protein conserved hypothetical protein gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1146 M479_1147 M479_1147 M479_1147 1290571 1291587 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1147 M479_1148 M479_1148 M479_1148 1292443 1292688 + hypothetical protein conserved hypothetical protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1148 M479_1149 M479_1149 M479_1149 1292834 1294114 + voltage gated chloride channel family protein [P] COG0038 Chloride channel protein EriC gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1149 M479_115 M479_115 tolQ tolQ 120114 120800 + protein TolQ tolQ: protein TolQ~[U] COG0811 Biopolymer transport proteins gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=M479_115 M479_1150 M479_1150 bioD bioD 1294276 1294944 - dethiobiotin synthase bioD: dethiobiotin synthase~[H] COG0132 Dethiobiotin synthetase gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1150 M479_1151 M479_1151 M479_1151 1295011 1295106 + hypothetical protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1151 M479_1152 M479_1152 M479_1152 1295168 1296337 - ROK family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1152 M479_1153 M479_1153 M479_1153 1296551 1297429 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1153 M479_1154 M479_1154 M479_1154 1297626 1298744 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1154 M479_1155 M479_1155 tus tus 1299129 1300064 + DNA replication terminus site-binding protein rep_term_tus: DNA replication terminus site-binding protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1155 M479_1156 M479_1156 fumC fumC 1300144 1301541 - fumarate hydratase%2C class II fumC_II: fumarate hydratase%2C class II~[C] COG0114 Fumarase gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1156 M479_1157 M479_1157 manA manA 1301921 1303000 + mannose-6-phosphate isomerase%2C class I manA: mannose-6-phosphate isomerase%2C class I~[G] COG1482 Phosphomannose isomerase gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1157 M479_1158 M479_1158 M479_1158 1303240 1304784 + hypothetical protein conserved hypothetical protein~[S] COG5339 Uncharacterized protein conserved in bacteria gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1158 M479_1159 M479_1159 M479_1159 1304833 1305432 - hypothetical protein conserved hypothetical protein gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1159 M479_116 M479_116 tolR tolR 120813 121241 + protein TolR tolR: protein TolR~[U] COG0848 Biopolymer transport protein gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=M479_116 M479_1160 M479_1160 M479_1160 1305638 1306666 - hypothetical protein conserved hypothetical protein~[R] COG0385 Predicted Na+-dependent transporter gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1160 M479_1161 M479_1161 M479_1161 1306860 1307909 - putative oxidoreductase [R] COG0673 Predicted dehydrogenases and related proteins gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1161 M479_1162 M479_1162 M479_1162 1308037 1308969 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1162 M479_1163 M479_1163 M479_1163 1309190 1310062 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1163 M479_1164 M479_1164 araH araH 1310059 1310235 - ABC L-arabinose transporter%2C permease subunit araH domain protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1164 M479_1165 M479_1165 M479_1165 1310253 1311824 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1165 M479_1166 M479_1166 M479_1166 1311922 1312905 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1166 M479_1167 M479_1167 araB araB 1313313 1315016 + ribulokinase L-ribulokinase: ribulokinase~[C] COG1069 Ribulose kinase gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1167 M479_1168 M479_1168 M479_1168 1315100 1316602 + L-arabinose isomerase family protein [G] COG2160 L-arabinose isomerase gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1168 M479_1169 M479_1169 M479_1169 1316602 1316736 + hypothetical protein conserved hypothetical protein gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1169 M479_117 M479_117 tolA tolA 121353 122519 + protein TolA tolA_full: protein TolA~[M] COG3064 Membrane protein involved in colicin uptake gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=M479_117 M479_1170 M479_1170 M479_1170 1316792 1318930 - type I secretion system ATPase family protein type_I_sec_HlyB: type I secretion system ATPase family protein~[V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1170 M479_1171 M479_1171 M479_1171 1318932 1319300 - hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1171 M479_1172 M479_1172 M479_1172 1319300 1320301 - hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1172 M479_1173 M479_1173 M479_1173 1320326 1320547 - putative rTX toxin transporter [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1173 M479_1174 M479_1174 M479_1174 1320600 1322384 - ABC transporter family protein [V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1174 M479_1175 M479_1175 M479_1175 1322859 1323302 + hypothetical protein conserved hypothetical protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1175 M479_1176 M479_1176 M479_1176 1323430 1324011 + electron transport complex%2C RnfABCDGE type%2C A subunit rnfA: electron transport complex%2C RnfABCDGE type%2C A subunit~[C] COG4657 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfA gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1176 M479_1177 M479_1177 M479_1177 1324011 1324634 + electron transport complex%2C RnfABCDGE type%2C B subunit rnfB: electron transport complex%2C RnfABCDGE type%2C B subunit~[C] COG2878 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfB gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1177 M479_1178 M479_1178 M479_1178 1324627 1326372 + electron transport complex%2C RnfABCDGE type%2C C subunit rnfC: electron transport complex%2C RnfABCDGE type%2C C subunit~[C] COG4656 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfC gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1178 M479_1179 M479_1179 M479_1179 1326477 1327370 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1179 M479_118 M479_118 tolB tolB 122639 123931 + Tol-Pal system beta propeller repeat protein TolB propeller_TolB: Tol-Pal system beta propeller repeat protein TolB~[U] COG0823 Periplasmic component of the Tol biopolymer transport system gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=M479_118 M479_1180 M479_1180 M479_1180 1327859 1328953 + electron transport complex%2C RnfABCDGE type%2C D subunit rnfD: electron transport complex%2C RnfABCDGE type%2C D subunit~[C] COG4658 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfD gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1180 M479_1181 M479_1181 M479_1181 1328963 1329592 + electron transport complex%2C RnfABCDGE type%2C G subunit rnfG: electron transport complex%2C RnfABCDGE type%2C G subunit~[C] COG4659 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfG gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1181 M479_1182 M479_1182 M479_1182 1329589 1330290 + electron transport complex%2C RnfABCDGE type%2C E subunit rnfE: electron transport complex%2C RnfABCDGE type%2C E subunit~[C] COG4660 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfE gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1182 M479_1183 M479_1183 nth nth 1330287 1330928 + endonuclease III nth: endonuclease III~[L] COG0177 Predicted EndoIII-related endonuclease gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1183 M479_1184 M479_1184 M479_1184 1331111 1332109 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1184 M479_1185 M479_1185 M479_1185 1332147 1333457 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1185 M479_1186 M479_1186 rnb rnb 1334116 1336050 + exoribonuclease II RNase_B: exoribonuclease II~[K] COG4776 Exoribonuclease II gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1186 M479_1187 M479_1187 M479_1187 1336400 1338466 + carbon starvation CstA family protein [T] COG1966 Carbon starvation protein%2C predicted membrane protein gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1187 M479_1188 M479_1188 M479_1188 1338459 1338764 + hypothetical protein conserved hypothetical protein~[S] COG2879 Uncharacterized small protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1188 M479_1189 M479_1189 fsa fsa 1338881 1339546 - fructose-6-phosphate aldolase fsa_talC_mipB: fructose-6-phosphate aldolase~[G] COG0176 Transaldolase gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1189 M479_119 M479_119 pal pal 123982 124488 + peptidoglycan-associated lipoprotein pal_lipo: peptidoglycan-associated lipoprotein~[M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=M479_119 M479_1190 M479_1190 M479_1190 1339880 1340128 + hypothetical protein conserved hypothetical protein~[S] COG5460 Uncharacterized conserved protein gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1190 M479_1191 M479_1191 araD araD 1340157 1340852 - L-ribulose-5-phosphate 4-epimerase araD: L-ribulose-5-phosphate 4-epimerase~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1191 M479_1192 M479_1192 M479_1192 1341332 1341550 + putative osmotically inducible lipoprotein B gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1192 M479_1193 M479_1193 M479_1193 1341765 1342091 - translation initiation factor SUI1 family protein [J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1193 M479_1194 M479_1194 pyrF pyrF 1342091 1342828 - orotidine 5'-phosphate decarboxylase pyrF: orotidine 5'-phosphate decarboxylase~[F] COG0284 Orotidine-5'-phosphate decarboxylase gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1194 M479_1195 M479_1195 M479_1195 1343298 1343597 + hypothetical protein conserved hypothetical protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1195 M479_1196 M479_1196 M479_1196 1343738 1344907 - tetratricopeptide repeat family protein [G] COG2956 Predicted N-acetylglucosaminyl transferase gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1196 M479_1197 M479_1197 yciS yciS 1344914 1345225 - inner membrane protein yciS [S] COG3771 Predicted membrane protein gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1197 M479_1198 M479_1198 M479_1198 1345394 1346155 - PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1198 M479_1199 M479_1199 ribA ribA 1346661 1347251 + GTP cyclohydrolase-2 [H] COG0807 GTP cyclohydrolase II gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1199 M479_12 M479_12 M479_12 17371 18300 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=M479_12 M479_120 M479_120 ygbF ygbF 124498 125307 + tol-pal system protein YbgF tol_pal_ybgF: tol-pal system protein YbgF~[S] COG1729 Uncharacterized protein conserved in bacteria gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=M479_120 M479_1200 M479_1200 acnA acnA 1347415 1350087 - aconitate hydratase 1 aconitase_1: aconitate hydratase 1~[C] COG1048 Aconitase A gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1200 M479_1201 M479_1201 M479_1201 1350451 1351308 - hypothetical protein conserved hypothetical protein gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1201 M479_1202 M479_1202 M479_1202 1351644 1352618 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1202 M479_1203 M479_1203 M479_1203 1353038 1353496 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1203 M479_1204 M479_1204 topA topA 1353726 1356341 - DNA topoisomerase I topA_bact: DNA topoisomerase I~[L] COG0551 Zn-finger domain associated with topoisomerase type I gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1204 M479_1205 M479_1205 M479_1205 1356368 1356667 - hypothetical protein conserved hypothetical protein gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1205 M479_1206 M479_1206 yciN yciN 1356760 1357011 + protein yciN gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1206 M479_1207 M479_1207 M479_1207 1357130 1358176 - peptidase S49 family protein [OU] COG0616 Periplasmic serine proteases (ClpP class) gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1207 M479_1208 M479_1208 M479_1208 1358348 1359109 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1208 M479_1209 M479_1209 cobO cobO 1359126 1359716 + cob(I)yrinic acid a%2Cc-diamide adenosyltransferase cobA: cob(I)yrinic acid a%2Cc-diamide adenosyltransferase~[H] COG2109 ATP:corrinoid adenosyltransferase gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1209 M479_121 M479_121 M479_121 125498 125573 + tRNA-Lys tRNA gene120 http://www.ncbi.nlm.nih.gov/gene/?term=M479_121 M479_1210 M479_1210 M479_1210 1359839 1360795 - pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1210 M479_1211 M479_1211 M479_1211 1361220 1361840 - tRNA threonylcarbamoyl adenosine modification protein%2C Sua5/YciO/YrdC/YwlC family [J] COG0009 Putative translation factor (SUA5) gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1211 M479_1212 M479_1212 M479_1212 1361857 1362792 - PHP domain protein [R] COG0613 Predicted metal-dependent phosphoesterases (PHP family) gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1212 M479_1213 M479_1213 trpE trpE 1363211 1364773 + anthranilate synthase component I trpE_proteo: anthranilate synthase component I~[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1213 M479_1214 M479_1214 trpG trpG 1364773 1365351 + anthranilate synthase component II [EH] COG0512 Anthranilate/para-aminobenzoate synthases component II gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1214 M479_1215 M479_1215 trpD trpD 1365366 1366364 + anthranilate phosphoribosyltransferase [E] COG0547 Anthranilate phosphoribosyltransferase gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1215 M479_1216 M479_1216 M479_1216 1366368 1367795 + indole-3-glycerol phosphate synthase family protein [E] COG0134 Indole-3-glycerol phosphate synthase gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1216 M479_1217 M479_1217 trpB trpB 1367952 1369142 + tryptophan synthase%2C beta subunit trpB: tryptophan synthase%2C beta subunit~[E] COG0133 Tryptophan synthase beta chain gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1217 M479_1218 M479_1218 trpA trpA 1369142 1369948 + tryptophan synthase%2C alpha subunit trpA: tryptophan synthase%2C alpha subunit~[E] COG0159 Tryptophan synthase alpha chain gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1218 M479_1219 M479_1219 M479_1219 1370291 1370605 + BON domain protein [R] COG2823 Predicted periplasmic or secreted lipoprotein gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1219 M479_122 M479_122 M479_122 125601 125676 + tRNA-Lys tRNA gene121 http://www.ncbi.nlm.nih.gov/gene/?term=M479_122 M479_1220 M479_1220 M479_1220 1370752 1371387 - oprF membrane domain protein [M] COG3047 Outer membrane protein W gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1220 M479_1221 M479_1221 M479_1221 1371873 1372643 + hypothetical protein conserved hypothetical protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1221 M479_1222 M479_1222 M479_1222 1372764 1373378 - STAS domain protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1222 M479_1223 M479_1223 M479_1223 1373410 1374492 - sulfate transporter family protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1223 M479_1224 M479_1224 ispZ ispZ 1374723 1375265 + intracellular septation protein A ispZ: intracellular septation protein A~[D] COG2917 Intracellular septation protein A gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1224 M479_1225 M479_1225 M479_1225 1375345 1375794 + thioesterase superfamily protein [I] COG1607 Acyl-CoA hydrolase gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1225 M479_1226 M479_1226 M479_1226 1375942 1377150 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1226 M479_1227 M479_1227 M479_1227 1377186 1377833 - hypothetical protein tonB_Cterm: TonB family C-terminal domain protein~[M] COG0810 Periplasmic protein TonB%2C links inner and outer membranes gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1227 M479_1228 M479_1228 M479_1228 1378302 1378541 + YCII-related domain protein [S] COG2350 Uncharacterized protein conserved in bacteria gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1228 M479_1229 M479_1229 M479_1229 1378764 1379009 + transcription factor zinc-finger family protein [S] COG3809 Uncharacterized protein conserved in bacteria gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1229 M479_123 M479_123 M479_123 125705 125774 + tRNA-OTHER tRNA-Pseudo tRNA gene122 http://www.ncbi.nlm.nih.gov/gene/?term=M479_123 M479_1230 M479_1230 M479_1230 1379125 1379388 - hypothetical protein conserved hypothetical protein gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1230 M479_1231 M479_1231 ail ail 1379609 1380148 - attachment invasion locus protein [M] COG3637 Opacity protein and related surface antigens gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1231 M479_1232 M479_1232 cls cls 1381195 1382655 + cardiolipin synthase bac_cardiolipin: cardiolipin synthase~[I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1232 M479_1233 M479_1233 M479_1233 1382820 1383143 + hypothetical protein conserved hypothetical protein~[S] COG3099 Uncharacterized protein conserved in bacteria gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1233 M479_1234 M479_1234 M479_1234 1383442 1383657 - hypothetical protein conserved hypothetical protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1234 M479_1235 M479_1235 M479_1235 1384218 1385219 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[E] COG4608 ABC-type oligopeptide transport system%2C ATPase component gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1235 M479_1236 M479_1236 M479_1236 1385216 1386217 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1236 M479_1237 M479_1237 oppC oppC 1386229 1387134 - oligopeptide transport system permease protein oppC [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1237 M479_1238 M479_1238 oppB oppB 1387153 1388073 - oligopeptide transport system permease protein oppB [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1238 M479_1239 M479_1239 oppA3 oppA3 1388160 1389797 - periplasmic oligopeptide-binding protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1239 M479_124 M479_124 M479_124 125872 125941 + tRNA-Lys tRNA gene123 http://www.ncbi.nlm.nih.gov/gene/?term=M479_124 M479_1240 M479_1240 M479_1240 1390634 1391278 - marC integral membrane family protein [U] COG2095 Multiple antibiotic transporter gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1240 M479_1241 M479_1241 M479_1241 1392085 1394760 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1241 M479_1242 M479_1242 M479_1242 1395511 1396101 - thymidine kinase family protein [F] COG1435 Thymidine kinase gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1242 M479_1243 M479_1243 hns hns 1396851 1397279 + DNA-binding protein H-NS [R] COG2916 DNA-binding protein H-NS gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1243 M479_1244 M479_1244 M479_1244 1397291 1398499 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1244 M479_1245 M479_1245 M479_1245 1399016 1400362 - nucleotide sugar dehydrogenase family protein NDP-sugDHase: nucleotide sugar dehydrogenase family protein~[M] COG1004 Predicted UDP-glucose 6-dehydrogenase gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1245 M479_1246 M479_1246 M479_1246 1400669 1401685 - response regulator [T] COG0784 FOG: CheY-like receiver gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1246 M479_1247 M479_1247 M479_1247 1403019 1403483 + SEC-C motif family protein [S] COG3012 Uncharacterized protein conserved in bacteria gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1247 M479_1248 M479_1248 purU purU 1403567 1404415 + formyltetrahydrofolate deformylase purU: formyltetrahydrofolate deformylase~[F] COG0788 Formyltetrahydrofolate hydrolase gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1248 M479_125 M479_125 nadA nadA 126310 127371 + quinolinate synthetase complex%2C A subunit nadA: quinolinate synthetase complex%2C A subunit~[H] COG0379 Quinolinate synthase gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=M479_125 M479_1250 M479_1250 M479_1250 1404564 1404648 + tRNA-Tyr tRNA gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1250 M479_1251 M479_1251 M479_1251 1405052 1406260 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1251 M479_1252 M479_1252 M479_1252 1406479 1407339 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1252 M479_1253 M479_1253 xth xth 1408149 1408955 + exodeoxyribonuclease III exoDNase_III: exodeoxyribonuclease III~[L] COG0708 Exonuclease III gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1253 M479_1254 M479_1254 nudG nudG 1409053 1409439 + CTP pyrophosphohydrolase [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1254 M479_1255 M479_1255 M479_1255 1409452 1409742 - hypothetical protein conserved hypothetical protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1255 M479_1256 M479_1256 topB topB 1409739 1411664 - DNA topoisomerase 3 [L] COG0550 Topoisomerase IA gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1256 M479_1257 M479_1257 selD selD 1411757 1412671 - selenide%2C water dikinase selD: selenide%2C water dikinase~[E] COG0709 Selenophosphate synthase gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1257 M479_1258 M479_1258 M479_1258 1412896 1413447 - nitroreductase family protein [C] COG0778 Nitroreductase gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1258 M479_1259 M479_1259 sppA sppA 1413610 1415460 + signal peptide peptidase SppA%2C 67K type sppA_67K: signal peptide peptidase SppA%2C 67K type~[OU] COG0616 Periplasmic serine proteases (ClpP class) gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1259 M479_126 M479_126 pnuC pnuC 127493 128218 + nicotinamide mononucleotide transporter PnuC family protein NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC family protein~[H] COG3201 Nicotinamide mononucleotide transporter gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=M479_126 M479_1260 M479_1260 ansA ansA 1415577 1416593 + cytoplasmic L-asparaginase I [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1260 M479_1261 M479_1261 M479_1261 1416608 1417255 + isochorismatase family protein [Q] COG1335 Amidases related to nicotinamidase gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1261 M479_1262 M479_1262 M479_1262 1417389 1417661 - hypothetical protein conserved hypothetical protein~[S] COG3139 Uncharacterized protein conserved in bacteria gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1262 M479_1263 M479_1263 msrB msrB 1417732 1418145 - methionine-R-sulfoxide reductase [O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1263 M479_1264 M479_1264 gap gap 1418493 1419488 + glyceraldehyde-3-phosphate dehydrogenase%2C type I GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase%2C type I~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1264 M479_1265 M479_1265 M479_1265 1419802 1420677 + aldose 1-epimerase family protein [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1265 M479_1266 M479_1266 M479_1266 1420750 1421520 - mltA-interacting MipA family protein [M] COG3713 Outer membrane protein V gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1266 M479_1267 M479_1267 M479_1267 1421943 1423877 + hypothetical protein prkA serine kinase C-terminal domain protein~[T] COG2766 Putative Ser protein kinase gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1267 M479_1268 M479_1268 M479_1268 1424027 1425301 + hypothetical protein conserved hypothetical protein~[S] COG2718 Uncharacterized conserved protein gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1268 M479_1269 M479_1269 M479_1269 1425409 1426527 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1269 M479_127 M479_127 M479_127 128333 129271 - cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG1230 Co/Zn/Cd efflux system component gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=M479_127 M479_1270 M479_1270 M479_1270 1426562 1427467 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1270 M479_1271 M479_1271 M479_1271 1427665 1428534 + pirin family protein [R] COG1741 Pirin-related protein gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1271 M479_1272 M479_1272 M479_1272 1428799 1430001 + drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1272 M479_1273 M479_1273 M479_1273 1430017 1431321 - ketopantoate reductase PanE/ApbA family protein [E] COG0665 Glycine/D-amino acid oxidases (deaminating) gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1273 M479_1274 M479_1274 M479_1274 1431787 1433322 + spoVR like family protein [S] COG2719 Uncharacterized conserved protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1274 M479_1275 M479_1275 fadR fadR 1433540 1434259 - fatty acid metabolism transcriptional regulator FadR fadR_gamma: fatty acid metabolism transcriptional regulator FadR~[K] COG2186 Transcriptional regulators gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1275 M479_1276 M479_1276 nhaB nhaB 1434503 1436077 + Na+/H+ antiporter NhaB nhaB: Na+/H+ antiporter NhaB~[P] COG3067 Na+/H+ antiporter gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1276 M479_1277 M479_1277 M479_1277 1436313 1436843 + disulfide bond formation DsbB family protein [O] COG1495 Disulfide bond formation protein DsbB gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1277 M479_1278 M479_1278 M479_1278 1437260 1437616 - hypothetical protein conserved hypothetical protein gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1278 M479_1279 M479_1279 M479_1279 1438708 1439448 + hypothetical protein conserved hypothetical protein gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1279 M479_128 M479_128 M479_128 129684 130571 + 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=M479_128 M479_1280 M479_1280 M479_1280 1439465 1440664 + beta-eliminating lyase family protein [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1280 M479_1281 M479_1281 M479_1281 1440668 1441840 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1281 M479_1282 M479_1282 M479_1282 1442251 1442670 - caudovirales tail fiber assembly family protein gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1282 M479_1283 M479_1283 M479_1283 1442681 1443598 - hypothetical protein conserved hypothetical protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1283 M479_1284 M479_1284 M479_1284 1443615 1444613 - hypothetical protein conserved hypothetical protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1284 M479_1285 M479_1285 M479_1285 1444613 1447816 - fibronectin type III domain protein [S] COG4733 Phage-related protein%2C tail component gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1285 M479_1286 M479_1286 M479_1286 1448182 1448346 - hypothetical protein conserved hypothetical protein gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1286 M479_1287 M479_1287 M479_1287 1447992 1448213 + hypothetical protein gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1287 M479_1288 M479_1288 M479_1288 1448388 1448984 - bacteriophage lambda tail assembly I family protein [S] COG4723 Phage-related protein%2C tail component gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1288 M479_1289 M479_1289 M479_1289 1449064 1449414 - putative lipoprotein gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1289 M479_129 M479_129 M479_129 130528 130746 + DAHP synthetase I family protein [E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=M479_129 M479_1290 M479_1290 M479_1290 1449422 1449958 - hypothetical protein conserved hypothetical protein gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1290 M479_1291 M479_1291 M479_1291 1450072 1451079 - hypothetical protein BRO family%2C N-terminal domain protein~[K] COG3617 Prophage antirepressor gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1291 M479_1292 M479_1292 M479_1292 1451153 1451320 - hypothetical protein gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1292 M479_1293 M479_1293 M479_1293 1451444 1451875 + arc-like DNA binding domain protein gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1293 M479_1294 M479_1294 M479_1294 1451954 1452145 - hypothetical protein conserved hypothetical protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1294 M479_1295 M479_1295 M479_1295 1452142 1452597 - hypothetical protein conserved hypothetical protein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1295 M479_1296 M479_1296 M479_1296 1452858 1453568 - hypothetical protein conserved hypothetical protein~[R] COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1296 M479_1297 M479_1297 M479_1297 1453571 1454323 - phage minor tail protein L phage_tail_L: phage minor tail protein L~[S] COG4672 Phage-related protein gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1297 M479_1298 M479_1298 M479_1298 1454443 1454901 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1298 M479_1299 M479_1299 M479_1299 1455153 1455611 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1299 M479_13 M479_13 M479_13 18349 19896 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=M479_13 M479_130 M479_130 M479_130 130928 131680 - phosphoglycerate mutase 1 family protein pgm_1: phosphoglycerate mutase 1 family protein~[G] COG0588 Phosphoglycerate mutase 1 gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=M479_130 M479_1300 M479_1300 M479_1300 1455917 1456258 - phage minor tail family protein [S] COG4718 Phage-related protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1300 M479_1301 M479_1301 M479_1301 1456261 1459776 - phage tail tape measure protein%2C lambda family tape_meas_lam_C: phage tail tape measure protein%2C lambda family~[S] COG5281 Phage-related minor tail protein gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1301 M479_1302 M479_1302 M479_1302 1459777 1459944 - hypothetical protein conserved hypothetical protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1302 M479_1303 M479_1303 M479_1303 1460085 1460396 - hypothetical protein conserved hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1303 M479_1304 M479_1304 M479_1304 1460409 1461329 - bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1304 M479_1305 M479_1305 M479_1305 1461395 1461802 - hypothetical protein bacteriophage related domain of unknown function family protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1305 M479_1306 M479_1306 M479_1306 1461799 1462383 - hypothetical protein conserved hypothetical protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1306 M479_1307 M479_1307 M479_1307 1462385 1462735 - putative phage structural protein gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1307 M479_1308 M479_1308 M479_1308 1462737 1462991 - hypothetical protein conserved hypothetical protein gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1308 M479_1309 M479_1309 M479_1309 1462988 1463470 - hypothetical protein conserved hypothetical protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1309 M479_131 M479_131 M479_131 132027 132362 - psiF repeat family protein gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=M479_131 M479_1310 M479_1310 M479_1310 1463518 1464723 - bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1310 M479_1311 M479_1311 M479_1311 1464737 1465510 - putative phage protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1311 M479_1312 M479_1312 M479_1312 1465632 1466744 - hypothetical protein conserved hypothetical protein gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1312 M479_1313 M479_1313 M479_1313 1466745 1467155 - hypothetical protein conserved hypothetical protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1313 M479_1314 M479_1314 M479_1314 1467405 1468133 - putative phage domain protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1314 M479_1315 M479_1315 M479_1315 1468133 1469623 - hypothetical protein conserved hypothetical protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1315 M479_1316 M479_1316 M479_1316 1469633 1470082 - hypothetical protein conserved hypothetical protein~[S] COG5556 Uncharacterized conserved protein gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1316 M479_1317 M479_1317 M479_1317 1470113 1470727 - hypothetical protein conserved hypothetical protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1317 M479_1318 M479_1318 M479_1318 1471205 1471918 - phage antirepressor KilAC domain protein [S] COG3645 Uncharacterized phage-encoded protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1318 M479_1319 M479_1319 M479_1319 1472190 1472348 - hypothetical protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1319 M479_132 M479_132 galM galM 132655 133551 - galactose mutarotase galM_Leloir: galactose mutarotase~[G] COG2017 Galactose mutarotase and related enzymes gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=M479_132 M479_1320 M479_1320 M479_1320 1472464 1472922 - bacteriophage Rz lysis family protein gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1320 M479_1321 M479_1321 a17 a17 1472907 1473419 - lysozyme [R] COG3772 Phage-related lysozyme (muraminidase) gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1321 M479_1322 M479_1322 M479_1322 1473450 1473647 - putative phage 21-like group II holin gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1322 M479_1323 M479_1323 M479_1323 1473893 1474168 + hypothetical protein conserved hypothetical protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1323 M479_1324 M479_1324 M479_1324 1474537 1474713 + hypothetical protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1324 M479_1325 M479_1325 M479_1325 1474798 1475361 - hypothetical protein BRO family%2C N-terminal domain protein~[K] COG3617 Prophage antirepressor gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1325 M479_1326 M479_1326 M479_1326 1475632 1476021 - phage antitermination Q family protein gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1326 M479_1327 M479_1327 M479_1327 1476022 1476627 - bacteriophage Lambda NinG family protein gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1327 M479_1328 M479_1328 ninB ninB 1476701 1477147 - protein ninB gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1328 M479_1329 M479_1329 M479_1329 1477174 1477872 + D12 class N6 adenine-specific DNA methyltransferase family protein [L] COG0338 Site-specific DNA methylase gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1329 M479_133 M479_133 galM galM 133572 133724 - galactose mutarotase gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=M479_133 M479_1330 M479_1330 M479_1330 1478172 1478432 + hypothetical protein conserved hypothetical protein gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1330 M479_1331 M479_1331 M479_1331 1478600 1479379 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1331 M479_1332 M479_1332 M479_1332 1479379 1480401 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1332 M479_1333 M479_1333 M479_1333 1480471 1481709 + phage integrase family protein [L] COG0582 Integrase gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1333 M479_1334 M479_1334 M479_1334 1481736 1482182 - putative zinc-/iron-chelating domain protein [S] COG2983 Uncharacterized conserved protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1334 M479_1335 M479_1335 M479_1335 1482285 1482941 - fumarylacetoacetate (FAA) hydrolase family protein [Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1335 M479_1336 M479_1336 M479_1336 1483012 1484097 - lytic murein transglycosylase family protein mltB_2: lytic murein transglycosylase family protein~[M] COG2951 Membrane-bound lytic murein transglycosylase B gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1336 M479_1337 M479_1337 M479_1337 1484238 1484510 - hypothetical protein conserved hypothetical protein~[S] COG3100 Uncharacterized protein conserved in bacteria gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1337 M479_1338 M479_1338 minC minC 1485231 1485917 + septum site-determining protein MinC minC: septum site-determining protein MinC~[D] COG0850 Septum formation inhibitor gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1338 M479_1339 M479_1339 minD minD 1485942 1486754 + septum site-determining protein MinD minD_bact: septum site-determining protein MinD~[D] COG2894 Septum formation inhibitor-activating ATPase gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1339 M479_134 M479_134 galK galK 133718 134869 - galactokinase gal_kin: galactokinase~[G] COG0153 Galactokinase gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=M479_134 M479_1340 M479_1340 minE minE 1486758 1487027 + cell division topological specificity factor MinE minE: cell division topological specificity factor MinE~[D] COG0851 Septum formation topological specificity factor gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1340 M479_1341 M479_1341 rnd rnd 1487264 1488385 - ribonuclease D rnd: ribonuclease D~[J] COG0349 Ribonuclease D gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1341 M479_1342 M479_1342 M479_1342 1488545 1490233 - AMP-binding enzyme family protein [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1342 M479_1343 M479_1343 M479_1343 1491255 1491476 - putative outer membrane protein [M] COG3065 Starvation-inducible outer membrane lipoprotein gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1343 M479_1344 M479_1344 yeaZ yeaZ 1491613 1492311 - tRNA threonylcarbamoyl adenosine modification protein YeaZ T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ~[O] COG1214 Inactive homolog of metal-dependent proteases%2C putative molecular chaperone gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1344 M479_1345 M479_1345 M479_1345 1492383 1494287 - DEAD_2 family protein [KL] COG1199 Rad3-related DNA helicases gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1345 M479_1346 M479_1346 M479_1346 1494418 1494762 + endoribonuclease L-PSP family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1346 M479_1347 M479_1347 M479_1347 1494894 1495223 - small Multidrug Resistance family protein [P] COG2076 Membrane transporters of cations and cationic drugs gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1347 M479_1348 M479_1348 M479_1348 1495210 1495653 - small Multidrug Resistance family protein [P] COG2076 Membrane transporters of cations and cationic drugs gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1348 M479_1349 M479_1349 eda eda 1496368 1497009 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein~[G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1349 M479_135 M479_135 galT galT 134866 135918 - galactose-1-phosphate uridylyltransferase galT_1: galactose-1-phosphate uridylyltransferase~[C] COG1085 Galactose-1-phosphate uridylyltransferase gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=M479_135 M479_1350 M479_1350 M479_1350 1497016 1497207 - hypothetical protein conserved hypothetical protein gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1350 M479_1351 M479_1351 zwf zwf 1497251 1498726 - glucose-6-phosphate dehydrogenase zwf: glucose-6-phosphate dehydrogenase~[G] COG0364 Glucose-6-phosphate 1-dehydrogenase gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1351 M479_1352 M479_1352 M479_1352 1499088 1499957 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1352 M479_1353 M479_1353 pyk pyk 1500287 1501729 + pyruvate kinase pyruv_kin: pyruvate kinase~[G] COG0469 Pyruvate kinase gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1353 M479_1354 M479_1354 msbB msbB 1502069 1503031 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase~[M] COG1560 Lauroyl/myristoyl acyltransferase gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1354 M479_1355 M479_1355 M479_1355 1503298 1504614 - lysM domain protein [M] COG0739 Membrane proteins related to metalloendopeptidases gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1355 M479_1356 M479_1356 M479_1356 1504635 1505591 - periplasmic solute binding family protein [P] COG4531 ABC-type Zn2+ transport system%2C periplasmic component/surface adhesin gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1356 M479_1357 M479_1357 M479_1357 1505667 1506425 + ABC transporter family protein [P] COG1121 ABC-type Mn/Zn transport systems%2C ATPase component gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1357 M479_1358 M479_1358 M479_1358 1506422 1507207 + ABC 3 transport family protein [P] COG1108 ABC-type Mn2+/Zn2+ transport systems%2C permease components gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1358 M479_1359 M479_1359 ruvB ruvB 1507262 1508266 - Holliday junction DNA helicase RuvB ruvB: Holliday junction DNA helicase RuvB~[L] COG2255 Holliday junction resolvasome%2C helicase subunit gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1359 M479_136 M479_136 galE galE 135928 136944 - UDP-glucose 4-epimerase GalE galE: UDP-glucose 4-epimerase GalE~[M] COG1087 UDP-glucose 4-epimerase gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=M479_136 M479_1360 M479_1360 ruvA ruvA 1508428 1509042 - Holliday junction DNA helicase RuvA ruvA: Holliday junction DNA helicase RuvA~[L] COG0632 Holliday junction resolvasome%2C DNA-binding subunit gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1360 M479_1361 M479_1361 ruvC ruvC 1509325 1509846 - crossover junction endodeoxyribonuclease RuvC ruvC: crossover junction endodeoxyribonuclease RuvC~[L] COG0817 Holliday junction resolvasome%2C endonuclease subunit gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1361 M479_1362 M479_1362 M479_1362 1510055 1510798 - DNA-binding regulatory%2C YebC/PmpR family protein [S] COG0217 Uncharacterized conserved protein gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1362 M479_1363 M479_1363 M479_1363 1510856 1511299 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1363 M479_1364 M479_1364 aspS aspS 1511299 1513095 - aspartate--tRNA ligase aspS_bact: aspartate--tRNA ligase~[J] COG0173 Aspartyl-tRNA synthetase gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1364 M479_1365 M479_1365 M479_1365 1514029 1514844 + hypothetical protein conserved hypothetical protein~[S] COG1801 Uncharacterized conserved protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1365 M479_1366 M479_1366 yecN yecN 1515024 1515419 + inner membrane protein yecN [R] COG3788 Uncharacterized relative of glutathione S-transferase%2C MAPEG superfamily gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1366 M479_1367 M479_1367 cmoA cmoA 1515610 1516413 + tRNA (cmo5U34)-methyltransferase [QR] COG0500 SAM-dependent methyltransferases gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1367 M479_1368 M479_1368 cmoB cmoB 1516410 1517381 + tRNA (mo5U34)-methyltransferase [QR] COG0500 SAM-dependent methyltransferases gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1368 M479_1369 M479_1369 M479_1369 1517574 1518338 - cutC family protein [P] COG3142 Uncharacterized protein involved in copper resistance gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1369 M479_137 M479_137 M479_137 137304 137660 - CAAX protease self-immunity family protein [R] COG1266 Predicted metal-dependent membrane protease gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=M479_137 M479_1370 M479_1370 M479_1370 1518570 1519145 - yecM family protein [S] COG3102 Uncharacterized protein conserved in bacteria gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1370 M479_1371 M479_1371 argS argS 1519763 1521493 + arginine--tRNA ligase argS: arginine--tRNA ligase~[J] COG0018 Arginyl-tRNA synthetase gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1371 M479_1372 M479_1372 M479_1372 1521724 1526454 - hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1372 M479_1373 M479_1373 shlB shlB 1526484 1528145 - hemolysin transporter protein shlB [U] COG2831 Hemolysin activation/secretion protein gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1373 M479_1374 M479_1374 mviN mviN 1528633 1530168 - murein biosynthesis integral membrane protein MurJ murJ_mviN: murein biosynthesis integral membrane protein MurJ~[R] COG0728 Uncharacterized membrane protein%2C putative virulence factor gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1374 M479_1375 M479_1375 M479_1375 1530435 1531346 - oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1375 M479_1376 M479_1376 M479_1376 1532053 1532637 - acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1376 M479_1377 M479_1377 M479_1377 1532931 1534136 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1377 M479_1378 M479_1378 M479_1378 1534531 1535094 + hypothetical protein conserved hypothetical protein gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1378 M479_1379 M479_1379 M479_1379 1535548 1536108 - nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1379 M479_138 M479_138 M479_138 137635 138117 - putative membrane protein [R] COG1266 Predicted metal-dependent membrane protease gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=M479_138 M479_1380 M479_1380 M479_1380 1536145 1536882 - PHP domain protein [ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1380 M479_1381 M479_1381 M479_1381 1537171 1537260 + tRNA-Ser tRNA gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1381 M479_1382 M479_1382 M479_1382 1537517 1538629 - ROK family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1382 M479_1383 M479_1383 M479_1383 1538643 1539473 - glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1383 M479_1384 M479_1384 M479_1384 1539688 1540014 + ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1384 M479_1385 M479_1385 M479_1385 1540102 1540560 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1385 M479_1386 M479_1386 M479_1386 1540581 1541465 + ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1386 M479_1387 M479_1387 M479_1387 1541462 1542328 + binding--dependent transport system inner membrane component family protein [E] COG1176 ABC-type spermidine/putrescine transport system%2C permease component I gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1387 M479_1388 M479_1388 M479_1388 1542325 1543161 + binding--dependent transport system inner membrane component family protein [E] COG1177 ABC-type spermidine/putrescine transport system%2C permease component II gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1388 M479_1389 M479_1389 M479_1389 1543181 1544263 + bacterial extracellular solute-binding family protein [R] COG4134 ABC-type uncharacterized transport system%2C periplasmic component gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1389 M479_139 M479_139 M479_139 138172 138300 - hypothetical protein conserved hypothetical protein gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=M479_139 M479_1390 M479_1390 M479_1390 1544564 1545439 + glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1390 M479_1391 M479_1391 M479_1391 1545581 1545670 + tRNA-Ser tRNA gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1391 M479_1392 M479_1392 sulP sulP 1546506 1548203 + sulfate permease family protein sulP: sulfate permease family protein~[P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1392 M479_1393 M479_1393 kdsA kdsA 1548680 1549534 - 3-deoxy-8-phosphooctulonate synthase KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase~[M] COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1393 M479_1394 M479_1394 M479_1394 1549630 1550439 - tetratricopeptide repeat family protein [S] COG2912 Uncharacterized conserved protein gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1394 M479_1395 M479_1395 M479_1395 1550436 1550837 - invasion expression up-regulator%2C SirB family protein [S] COG3094 Uncharacterized protein conserved in bacteria gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1395 M479_1396 M479_1396 prmC prmC 1550901 1551731 - protein-(glutamine-N5) methyltransferase%2C release factor-specific RF_mod_PrmC: protein-(glutamine-N5) methyltransferase%2C release factor-specific~[J] COG2890 Methylase of polypeptide chain release factors gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1396 M479_1397 M479_1397 prfA prfA 1551731 1552813 - peptide chain release factor 1 prfA: peptide chain release factor 1~[J] COG0216 Protein chain release factor A gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1397 M479_1398 M479_1398 hemA hemA 1552846 1554108 - glutamyl-tRNA reductase hemA: glutamyl-tRNA reductase~[H] COG0373 Glutamyl-tRNA reductase gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1398 M479_1399 M479_1399 lolB lolB 1554414 1555037 + outer membrane lipoprotein LolB lolB: outer membrane lipoprotein LolB~[M] COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1399 M479_14 M479_14 M479_14 19908 20936 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=M479_14 M479_140 M479_140 M479_140 138334 139824 - ABC transporter family protein [P] COG1119 ABC-type molybdenum transport system%2C ATPase component/photorepair protein PhrA gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=M479_140 M479_1400 M479_1400 ispE ispE 1555099 1555938 + 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase~[I] COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1400 M479_1401 M479_1401 prs prs 1556279 1557226 + ribose-phosphate pyrophosphokinase [FE] COG0462 Phosphoribosylpyrophosphate synthetase gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1401 M479_1402 M479_1402 M479_1402 1557428 1557700 - hypothetical protein conserved hypothetical protein gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1402 M479_1403 M479_1403 pth pth 1558062 1558652 + aminoacyl-tRNA hydrolase pth: aminoacyl-tRNA hydrolase~[J] COG0193 Peptidyl-tRNA hydrolase gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1403 M479_1404 M479_1404 engD engD 1558816 1559907 + GTP-dependent nucleic acid-binding protein engD [J] COG0012 Predicted GTPase%2C probable translation factor gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1404 M479_1405 M479_1405 M479_1405 1560120 1560518 + helix-turn-helix domain protein gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1405 M479_1406 M479_1406 M479_1406 1560536 1561045 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1406 M479_1407 M479_1407 M479_1407 1561093 1561491 - rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1407 M479_1408 M479_1408 M479_1408 1561499 1562329 - alpha/beta hydrolase fold family protein [I] COG0657 Esterase/lipase gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1408 M479_1409 M479_1409 M479_1409 1562326 1562982 - hypothetical protein conserved hypothetical protein gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1409 M479_141 M479_141 M479_141 139934 140725 - ModE molybdate transport repressor domain protein modE_repress: ModE molybdate transport repressor domain protein~[R] COG2005 N-terminal domain of molybdenum-binding protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=M479_141 M479_1410 M479_1410 M479_1410 1563613 1564455 + hypothetical protein conserved hypothetical protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1410 M479_1411 M479_1411 M479_1411 1564663 1565358 - hypothetical protein conserved hypothetical protein gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1411 M479_1412 M479_1412 M479_1412 1565373 1566038 - NADPH-dependent FMN reductase family protein [C] COG0716 Flavodoxins gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1412 M479_1413 M479_1413 M479_1413 1566229 1567320 - X-Pro dipeptidyl-peptidase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1413 M479_1414 M479_1414 M479_1414 1567585 1567908 + response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1414 M479_1415 M479_1415 M479_1415 1567935 1568957 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1415 M479_1416 M479_1416 M479_1416 1568957 1569736 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1416 M479_1417 M479_1417 M479_1417 1569775 1570236 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1417 M479_1418 M479_1418 M479_1418 1570248 1571633 + heavy metal sensor kinase family protein cztS_silS_copS: heavy metal sensor kinase family protein~[T] COG0642 Signal transduction histidine kinase gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1418 M479_1419 M479_1419 M479_1419 1571913 1572332 + carboxymuconolactone decarboxylase family protein [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1419 M479_142 M479_142 M479_142 140991 141143 + hypothetical protein conserved hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=M479_142 M479_1420 M479_1420 M479_1420 1572387 1572857 + araC-like ligand binding domain protein [S] COG1917 Uncharacterized conserved protein%2C contains double-stranded beta-helix domain gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1420 M479_1421 M479_1421 M479_1421 1573070 1574143 + alpha/beta hydrolase family protein gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1421 M479_1422 M479_1422 M479_1422 1574934 1575839 + HEAT repeats family protein gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1422 M479_1423 M479_1423 M479_1423 1575845 1576777 + hypothetical protein conserved hypothetical protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1423 M479_1424 M479_1424 M479_1424 1576764 1577714 + hypothetical protein conserved hypothetical protein gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1424 M479_1425 M479_1425 M479_1425 1577760 1577903 + hypothetical protein conserved hypothetical protein gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1425 M479_1426 M479_1426 M479_1426 1578055 1578735 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1426 M479_1427 M479_1427 M479_1427 1578840 1579499 + methyltransferase small domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1427 M479_1428 M479_1428 M479_1428 1579634 1580272 - ribose/Galactose Isomerase family protein [G] COG0698 Ribose 5-phosphate isomerase RpiB gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1428 M479_1429 M479_1429 M479_1429 1580519 1582630 - hypothetical protein conserved hypothetical protein gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1429 M479_143 M479_143 modA modA 141378 142157 + molybdate ABC transporter%2C periplasmic molybdate-binding protein modA: molybdate ABC transporter%2C periplasmic molybdate-binding protein~[P] COG0725 ABC-type molybdate transport system%2C periplasmic component gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=M479_143 M479_1430 M479_1430 M479_1430 1582835 1582993 - hypothetical protein conserved hypothetical protein gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1430 M479_1431 M479_1431 M479_1431 1583208 1585370 + sel1 repeat family protein [S] COG2849 Uncharacterized protein conserved in bacteria gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1431 M479_1432 M479_1432 M479_1432 1585416 1586624 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1432 M479_1433 M479_1433 M479_1433 1586757 1588475 + hypothetical protein conserved hypothetical protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1433 M479_1434 M479_1434 M479_1434 1588645 1589109 + putative exported protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1434 M479_1435 M479_1435 M479_1435 1589270 1590457 - UDP-glucoronosyl and UDP-glucosyl transferase family protein [GC] COG1819 Glycosyl transferases%2C related to UDP-glucuronosyltransferase gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1435 M479_1436 M479_1436 M479_1436 1590454 1591038 - hypothetical protein conserved hypothetical protein gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1436 M479_1437 M479_1437 M479_1437 1591035 1592189 - glycosyl transferase 21 family protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1437 M479_1438 M479_1438 M479_1438 1592189 1593151 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1438 M479_1439 M479_1439 M479_1439 1593285 1594571 - putative adenylate-forming enzyme [H] COG1541 Coenzyme F390 synthetase gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1439 M479_144 M479_144 modB modB 142157 142852 + molybdate ABC transporter%2C permease protein modB_ABC: molybdate ABC transporter%2C permease protein~[P] COG4149 ABC-type molybdate transport system%2C permease component gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=M479_144 M479_1440 M479_1440 M479_1440 1594568 1595374 - metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1440 M479_1441 M479_1441 M479_1441 1595367 1596383 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1441 M479_1442 M479_1442 M479_1442 1596397 1596927 - 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1442 M479_1443 M479_1443 M479_1443 1596896 1597405 - hypothetical protein thiolase%2C N-terminal domain protein~[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1443 M479_1444 M479_1444 M479_1444 1598042 1600078 + chorismate binding enzyme family protein [EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1444 M479_1445 M479_1445 M479_1445 1600256 1600828 - hutD family protein [S] COG3758 Uncharacterized protein conserved in bacteria gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1445 M479_1446 M479_1446 hutF hutF 1600828 1602198 - formiminoglutamate deiminase hutF: formiminoglutamate deiminase~[FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1446 M479_1447 M479_1447 hutC hutC 1602346 1603113 + histidine utilization repressor his_ut_repres: histidine utilization repressor~[K] COG2188 Transcriptional regulators gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1447 M479_1448 M479_1448 hutI hutI 1603317 1604537 + imidazolonepropionase hutI: imidazolonepropionase~[Q] COG1228 Imidazolonepropionase and related amidohydrolases gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1448 M479_1449 M479_1449 M479_1449 1604628 1605650 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1449 M479_145 M479_145 modC modC 142846 143925 + molybdate ABC transporter%2C ATP-binding protein modC_ABC: molybdate ABC transporter%2C ATP-binding protein~[P] COG4148 ABC-type molybdate transport system%2C ATPase component gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=M479_145 M479_1450 M479_1450 M479_1450 1605650 1606429 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1450 M479_1451 M479_1451 hutG hutG 1606538 1607299 + N-formylglutamate deformylase hutG_amidohyd: N-formylglutamate deformylase~[E] COG3741 N-formylglutamate amidohydrolase gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1451 M479_1452 M479_1452 M479_1452 1607360 1608568 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1452 M479_1453 M479_1453 M479_1453 1609007 1610089 - gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1453 M479_1454 M479_1454 astE astE 1610833 1611825 - succinylglutamate desuccinylase arg_catab_astE: succinylglutamate desuccinylase~[E] COG2988 Succinylglutamate desuccinylase gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1454 M479_1455 M479_1455 astB astB 1611886 1613229 - succinylarginine dihydrolase arg_catab_astB: succinylarginine dihydrolase~[E] COG3724 Succinylarginine dihydrolase gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1455 M479_1456 M479_1456 astD astD 1613253 1614740 - succinylglutamate-semialdehyde dehydrogenase arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1456 M479_1457 M479_1457 astA astA 1614767 1615819 - arginine N-succinyltransferase arg_catab_AstA: arginine N-succinyltransferase~[E] COG3138 Arginine/ornithine N-succinyltransferase beta subunit gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1457 M479_1458 M479_1458 astC astC 1615849 1617093 - succinylornithine transaminase family protein arg_catab_astC: succinylornithine transaminase family protein~[E] COG4992 Ornithine/acetylornithine aminotransferase gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1458 M479_1459 M479_1459 M479_1459 1617347 1617436 + hypothetical protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1459 M479_146 M479_146 M479_146 143981 144802 - Cof-like hydrolase family protein cof-sub: Cof-like hydrolase family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=M479_146 M479_1460 M479_1460 M479_1460 1617571 1617714 - hypothetical protein conserved hypothetical protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1460 M479_1461 M479_1461 M479_1461 1617730 1619031 - aminotransferase class I and II family protein [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1461 M479_1462 M479_1462 M479_1462 1619461 1621242 + histidine kinase family protein [T] COG3850 Signal transduction histidine kinase%2C nitrate/nitrite-specific gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1462 M479_1463 M479_1463 chaA chaA 1621791 1621925 + calcium/proton antiporter domain protein [P] COG0387 Ca2+/H+ antiporter gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1463 M479_1464 M479_1464 M479_1464 1621927 1622868 + sodium/calcium exchanger family protein [P] COG0387 Ca2+/H+ antiporter gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1464 M479_1465 M479_1465 M479_1465 1622971 1623759 - phoH-like family protein [T] COG1702 Phosphate starvation-inducible protein PhoH%2C predicted ATPase gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1465 M479_1466 M479_1466 M479_1466 1623819 1624097 - hypothetical protein conserved hypothetical protein gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1466 M479_1467 M479_1467 M479_1467 1624536 1625246 - acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1467 M479_1468 M479_1468 pgaD pgaD 1625768 1626235 - poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD PGA_PgaD: poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1468 M479_1469 M479_1469 pgaC pgaC 1626232 1627566 - poly-beta-1%2C6 N-acetyl-D-glucosamine synthase pgaC_IcaA: poly-beta-1%2C6 N-acetyl-D-glucosamine synthase~[M] COG1215 Glycosyltransferases%2C probably involved in cell wall biogenesis gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1469 M479_147 M479_147 M479_147 145093 146097 + lactonase%2C 7-bladed beta-propeller family protein [G] COG2706 3-carboxymuconate cyclase gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=M479_147 M479_1470 M479_1470 pgaB pgaB 1627556 1629577 - poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB deacetyl_PgaB: poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB~[G] COG0726 Predicted xylanase/chitin deacetylase gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1470 M479_1471 M479_1471 pgaA pgaA 1629590 1632058 - poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA PGA_TPR_OMP: poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1471 M479_1472 M479_1472 M479_1472 1632727 1633944 - hypothetical protein creatinase/Prolidase N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1472 M479_1473 M479_1473 tehB tehB 1634085 1634972 - tellurite resistance protein TehB tehB: tellurite resistance protein TehB~[QR] COG0500 SAM-dependent methyltransferases gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1473 M479_1474 M479_1474 M479_1474 1635145 1635456 - cytochrome c family protein [C] COG2863 Cytochrome c553 gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1474 M479_1475 M479_1475 M479_1475 1635456 1635926 - ahpC/TSA family protein [OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1475 M479_1476 M479_1476 M479_1476 1635943 1636656 - ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1476 M479_1477 M479_1477 M479_1477 1636660 1637790 - ftsX-like permease family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1477 M479_1478 M479_1478 M479_1478 1637813 1639105 - ftsX-like permease family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1478 M479_1479 M479_1479 M479_1479 1639108 1640517 - YHS domain protein [S] COG4393 Predicted membrane protein gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1479 M479_148 M479_148 bioA bioA 146282 147562 - adenosylmethionine-8-amino-7-oxononanoate transaminase bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase~[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=M479_148 M479_1480 M479_1480 M479_1480 1640802 1641329 - fe2+ transport family protein [P] COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1480 M479_1481 M479_1481 M479_1481 1641533 1642558 - iron permease FTR1 family protein [P] COG0672 High-affinity Fe2+/Pb2+ permease gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1481 M479_1482 M479_1482 M479_1482 1642567 1643442 - putative membrane domain protein [P] COG0672 High-affinity Fe2+/Pb2+ permease gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1482 M479_1483 M479_1483 M479_1483 1644023 1645663 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1483 M479_1484 M479_1484 glsA glsA 1645774 1646781 - glutaminase A gln_ase: glutaminase A~[E] COG2066 Glutaminase gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1484 M479_1485 M479_1485 M479_1485 1647992 1648762 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1485 M479_1486 M479_1486 M479_1486 1649466 1650995 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1486 M479_1487 M479_1487 M479_1487 1651191 1652351 - aminotransferase class I and II family protein [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1487 M479_1488 M479_1488 nqrE nqrE 1652703 1653302 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~nqrE: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~[C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrE gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1488 M479_1489 M479_1489 M479_1489 1653607 1654569 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1489 M479_149 M479_149 bioB bioB 147661 148698 + biotin synthase bioB: biotin synthase~[H] COG0502 Biotin synthase and related enzymes gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=M479_149 M479_1490 M479_1490 M479_1490 1654681 1655550 + amidohydrolase family protein [R] COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1490 M479_1491 M479_1491 M479_1491 1655616 1656845 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1491 M479_1492 M479_1492 M479_1492 1657065 1657625 + hypothetical protein conserved hypothetical protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1492 M479_1493 M479_1493 M479_1493 1657650 1658123 + carboxypeptidase regulatory-like domain protein gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1493 M479_1494 M479_1494 M479_1494 1658198 1659076 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1494 M479_1495 M479_1495 M479_1495 1659171 1660013 + hpcH/HpaI aldolase/citrate lyase family protein [G] COG2301 Citrate lyase beta subunit gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1495 M479_1496 M479_1496 M479_1496 1660078 1660605 + maoC like domain protein [I] COG2030 Acyl dehydratase gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1496 M479_1497 M479_1497 M479_1497 1660628 1661950 + hypothetical protein acetyl-CoA hydrolase/transferase N-terminal domain protein~[C] COG0427 Acetyl-CoA hydrolase gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1497 M479_1498 M479_1498 M479_1498 1662140 1662271 - hypothetical protein conserved hypothetical protein gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1498 M479_1499 M479_1499 M479_1499 1662776 1663408 + bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1499 M479_15 M479_15 M479_15 20960 22093 + hypothetical protein oxidoreductase family%2C C-terminal alpha/beta domain protein~[R] COG0673 Predicted dehydrogenases and related proteins gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=M479_15 M479_150 M479_150 bioF bioF 148698 149849 + 8-amino-7-oxononanoate synthase bioF: 8-amino-7-oxononanoate synthase~[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=M479_150 M479_1500 M479_1500 M479_1500 1663383 1667384 + hpt domain protein [T] COG0642 Signal transduction histidine kinase gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1500 M479_1501 M479_1501 M479_1501 1667765 1668295 + putative f17a-A [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1501 M479_1502 M479_1502 M479_1502 1668388 1669032 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1502 M479_1503 M479_1503 M479_1503 1669081 1671672 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1503 M479_1504 M479_1504 M479_1504 1671760 1673037 + fimbrial family protein gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1504 M479_1505 M479_1505 M479_1505 1673034 1673546 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1505 M479_1506 M479_1506 M479_1506 1673608 1674816 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1506 M479_1507 M479_1507 M479_1507 1674840 1675097 + hypothetical protein pili assembly chaperone PapD%2C C-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1507 M479_1508 M479_1508 M479_1508 1675400 1675475 + tRNA-Asn tRNA gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1508 M479_1509 M479_1509 int int 1675637 1676899 + CP4-like integrase [L] COG0582 Integrase gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1509 M479_151 M479_151 bioC bioC 149833 150636 + malonyl-acyl carrier protein O-methyltransferase BioC bioC: malonyl-acyl carrier protein O-methyltransferase BioC~[QR] COG0500 SAM-dependent methyltransferases gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=M479_151 M479_1510 M479_1510 M479_1510 1677093 1678397 - salicylate synthase salicyl_syn: salicylate synthase~[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1510 M479_1511 M479_1511 M479_1511 1678425 1679705 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1511 M479_1512 M479_1512 M479_1512 1679698 1681500 - ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1512 M479_1513 M479_1513 M479_1513 1681487 1683289 - ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1513 M479_1514 M479_1514 M479_1514 1683456 1684415 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1514 M479_1515 M479_1515 M479_1515 1684606 1690713 + amino acid adenylation domain protein AA-adenyl-dom: amino acid adenylation domain protein~[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1515 M479_1516 M479_1516 M479_1516 1690801 1700292 + methyltransferase domain protein [Q] COG3321 Polyketide synthase modules and related proteins gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1516 M479_1517 M479_1517 M479_1517 1700289 1701389 + thiazolinyl imide reductase family protein thiaz-red: thiazolinyl imide reductase family protein~[Q] COG4693 Oxidoreductase (NAD-binding)%2C involved in siderophore biosynthesis gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1517 M479_1518 M479_1518 M479_1518 1701386 1702189 + thioesterase domain protein [Q] COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1518 M479_1519 M479_1519 M479_1519 1702193 1703770 + AMP-binding enzyme family protein [Q] COG1021 Peptide arylation enzymes gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1519 M479_152 M479_152 bioD bioD 150629 151351 + dethiobiotin synthase bioD: dethiobiotin synthase~[H] COG0132 Dethiobiotin synthetase gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=M479_152 M479_1520 M479_1520 M479_1520 1703901 1705922 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1520 M479_1521 M479_1521 M479_1521 1706795 1707160 + hypothetical protein conserved hypothetical protein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1521 M479_1522 M479_1522 M479_1522 1707168 1707722 + hypothetical protein conserved hypothetical protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1522 M479_1523 M479_1523 M479_1523 1707862 1708047 + prophage CP4-57 regulatory family protein [K] COG3311 Predicted transcriptional regulator gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1523 M479_1524 M479_1524 M479_1524 1708069 1708230 + hypothetical protein conserved hypothetical protein gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1524 M479_1525 M479_1525 M479_1525 1708236 1708817 + hypothetical protein conserved hypothetical protein gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1525 M479_1526 M479_1526 M479_1526 1708807 1709016 + phage/conjugal plasmid C-4 type zinc finger%2C TraR family protein C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger%2C TraR family protein~[T] COG1734 DnaK suppressor protein gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1526 M479_1527 M479_1527 M479_1527 1709259 1709372 + hemolysin expression modulating family protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1527 M479_1528 M479_1528 M479_1528 1709416 1710195 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1528 M479_1529 M479_1529 M479_1529 1710195 1711217 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1529 M479_153 M479_153 M479_153 151503 152213 - ABC transporter family protein [E] COG0410 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=M479_153 M479_1530 M479_1530 M479_1530 1711695 1711880 + hypothetical protein conserved hypothetical protein gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1530 M479_1531 M479_1531 M479_1531 1712130 1712411 - TOBE domain protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1531 M479_1532 M479_1532 M479_1532 1712357 1713247 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1532 M479_1533 M479_1533 M479_1533 1713272 1714099 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1533 M479_1534 M479_1534 M479_1534 1714092 1714952 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1534 M479_1535 M479_1535 M479_1535 1715019 1716287 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1535 M479_1536 M479_1536 M479_1536 1716317 1717330 - oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1536 M479_1537 M479_1537 M479_1537 1717998 1718795 - UTRA domain protein [K] COG2188 Transcriptional regulators gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1537 M479_1538 M479_1538 M479_1538 1718812 1718973 + hypothetical protein conserved hypothetical protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1538 M479_1539 M479_1539 M479_1539 1718982 1719086 - putative transposase A putative iS1400 transposase A~[L] COG2801 Transposase and inactivated derivatives gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1539 M479_154 M479_154 uvrB uvrB 153304 155319 + excinuclease ABC subunit B uvrb: excinuclease ABC subunit B~[L] COG0556 Helicase subunit of the DNA excision repair complex gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=M479_154 M479_1540 M479_1540 M479_1540 1719764 1720198 + hypothetical protein conserved hypothetical protein gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1540 M479_1541 M479_1541 M479_1541 1720210 1720779 + putative exported protein gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1541 M479_1542 M479_1542 M479_1542 1720967 1721140 + putative membrane protein gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1542 M479_1543 M479_1543 M479_1543 1721197 1721535 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1543 M479_1544 M479_1544 M479_1544 1721535 1722395 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1544 M479_1545 M479_1545 M479_1545 1722443 1723519 - TIR domain protein gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1545 M479_1546 M479_1546 M479_1546 1723585 1723875 - hypothetical protein conserved hypothetical protein~[S] COG3514 Uncharacterized protein conserved in bacteria gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1546 M479_1547 M479_1547 M479_1547 1723856 1724128 - hypothetical protein conserved hypothetical protein~[S] COG2929 Uncharacterized protein conserved in bacteria gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1547 M479_1548 M479_1548 M479_1548 1724259 1724513 + phage baseplate assembly V family protein phage_P2_V: phage baseplate assembly V family protein~[R] COG4540 Phage P2 baseplate assembly protein gpV gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1548 M479_1549 M479_1549 M479_1549 1724510 1724809 + lysozyme family protein [R] COG3628 Phage baseplate assembly protein W gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1549 M479_155 M479_155 M479_155 155611 155856 + hypothetical protein conserved hypothetical protein~[S] COG4628 Uncharacterized conserved protein gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=M479_155 M479_1550 M479_1550 M479_1550 1725548 1725763 + hypothetical protein conserved hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1550 M479_1551 M479_1551 M479_1551 1725760 1726065 + hypothetical protein conserved hypothetical protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1551 M479_1552 M479_1552 M479_1552 1726046 1726324 + hypothetical protein conserved hypothetical protein gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1552 M479_1553 M479_1553 M479_1553 1726489 1726629 + putative gpF1 [R] COG3497 Phage tail sheath protein FI gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1553 M479_1554 M479_1554 M479_1554 1726740 1727159 + transposase family protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1554 M479_1555 M479_1555 M479_1555 1727231 1728190 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1555 M479_1556 M479_1556 M479_1556 1728410 1728754 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1556 M479_1557 M479_1557 M479_1557 1728962 1729144 - putative membrane protein gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1557 M479_1558 M479_1558 M479_1558 1729336 1729509 - hypothetical protein conserved hypothetical protein gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1558 M479_1559 M479_1559 M479_1559 1729754 1729876 - hypothetical protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1559 M479_156 M479_156 M479_156 155987 156910 - hypothetical protein cofD_related: conserved hypothetical family protein~[S] COG0391 Uncharacterized conserved protein gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=M479_156 M479_1560 M479_1560 M479_1560 1730269 1730496 - hypothetical protein dnaB-like helicase C terminal domain protein~[L] COG0305 Replicative DNA helicase gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1560 M479_1561 M479_1561 M479_1561 1730607 1731122 + phage integrase family protein [L] COG0582 Integrase gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1561 M479_1562 M479_1562 M479_1562 1731420 1731505 - tRNA-Leu tRNA gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1562 M479_1563 M479_1563 M479_1563 1731516 1731589 - tRNA-Cys tRNA gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1563 M479_1564 M479_1564 M479_1564 1731642 1731717 - tRNA-Gly tRNA gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1564 M479_1565 M479_1565 pgsA pgsA 1731862 1732410 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~[I] COG0558 Phosphatidylglycerophosphate synthase gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1565 M479_1566 M479_1566 uvrC uvrC 1732469 1734301 - excinuclease ABC subunit C uvrC: excinuclease ABC subunit C~[L] COG0322 Nuclease subunit of the excinuclease complex gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1566 M479_1567 M479_1567 M479_1567 1734294 1734950 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1567 M479_1568 M479_1568 M479_1568 1735613 1735837 + hypothetical protein conserved hypothetical protein gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1568 M479_1569 M479_1569 M479_1569 1735965 1736306 + glpM family protein [R] COG3136 Uncharacterized membrane protein required for alginate biosynthesis gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1569 M479_157 M479_157 M479_157 157044 157190 - hypothetical protein conserved hypothetical protein gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=M479_157 M479_1570 M479_1570 M479_1570 1736334 1736588 - putative membrane protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1570 M479_1571 M479_1571 ail ail 1736928 1737479 - attachment invasion locus protein [M] COG3637 Opacity protein and related surface antigens gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1571 M479_1572 M479_1572 M479_1572 1738166 1738241 - tRNA-Lys tRNA gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1572 M479_1573 M479_1573 cycA cycA 1738603 1740018 + D-serine/D-alanine/glycine transporter [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1573 M479_1574 M479_1574 nanM nanM 1740144 1741322 - N-acetylneuraminate epimerase [S] COG3055 Uncharacterized protein conserved in bacteria gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1574 M479_1575 M479_1575 wrbA wrbA 1741716 1742315 + quinone oxidoreductase%2C type IV NAD(P)H:quinone oxidoreductase%2C type IV~flav_wrbA: NAD(P)H:quinone oxidoreductase%2C type IV~[R] COG0655 Multimeric flavodoxin WrbA gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1575 M479_1576 M479_1576 M479_1576 1742401 1743705 - Dyp-type peroxidase family protein dyp_perox_fam: Dyp-type peroxidase family protein~[P] COG2837 Predicted iron-dependent peroxidase gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1576 M479_1577 M479_1577 M479_1577 1743716 1744846 - imelysin family protein [P] COG2822 Predicted periplasmic lipoprotein involved in iron transport gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1577 M479_1578 M479_1578 M479_1578 1744876 1745724 - iron permease FTR1 family protein [P] COG0672 High-affinity Fe2+/Pb2+ permease gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1578 M479_1579 M479_1579 putP putP 1746057 1747541 - sodium/proline symporter na_Pro_sym: sodium/proline symporter~[ER] COG0591 Na+/proline symporter gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1579 M479_158 M479_158 moaA moaA 157442 158422 + molybdenum cofactor biosynthesis protein A moaA: molybdenum cofactor biosynthesis protein A~[H] COG2896 Molybdenum cofactor biosynthesis enzyme gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=M479_158 M479_1580 M479_1580 M479_1580 1747571 1747741 - putative membrane protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1580 M479_1581 M479_1581 M479_1581 1748113 1752084 + delta-1-pyrroline-5-carboxylate dehydrogenase D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase~[E] COG0506 Proline dehydrogenase gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1581 M479_1582 M479_1582 M479_1582 1752590 1752883 + hypothetical protein conserved hypothetical protein gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1582 M479_1583 M479_1583 M479_1583 1752883 1753254 + HTH domain protein [K] COG0640 Predicted transcriptional regulators gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1583 M479_1584 M479_1584 M479_1584 1753546 1754307 - ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1584 M479_1585 M479_1585 M479_1585 1754310 1754972 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1585 M479_1586 M479_1586 M479_1586 1754972 1755499 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1586 M479_1587 M479_1587 M479_1587 1755477 1755767 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1587 M479_1588 M479_1588 dcyD dcyD 1755891 1756883 - D-cysteine desulfhydrase [E] COG2515 1-aminocyclopropane-1-carboxylate deaminase gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1588 M479_1589 M479_1589 fliZ fliZ 1757172 1757681 - flagellar regulatory protein FliZ fliZ: flagellar regulatory protein FliZ gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1589 M479_159 M479_159 moaC moaC 158523 159002 + molybdenum cofactor biosynthesis protein C moaC: molybdenum cofactor biosynthesis protein C~[H] COG0315 Molybdenum cofactor biosynthesis enzyme gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=M479_159 M479_1590 M479_1590 fliA fliA 1757903 1758625 - RNA polymerase sigma factor for flagellar operon [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1590 M479_1591 M479_1591 M479_1591 1758972 1760081 - hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1591 M479_1592 M479_1592 fliD fliD 1760378 1761778 + flagellar hook-associated protein 2 [N] COG1345 Flagellar capping protein gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1592 M479_1593 M479_1593 fliS fliS 1761789 1762187 + flagellar protein FliS fliS: flagellar protein FliS~[NUO] COG1516 Flagellin-specific chaperone FliS gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1593 M479_1594 M479_1594 fliT fliT 1762198 1762560 + flagellar protein FliT gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1594 M479_1595 M479_1595 M479_1595 1762861 1763736 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1595 M479_1596 M479_1596 M479_1596 1764090 1767044 + HAMP domain protein [T] COG2206 HD-GYP domain gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1596 M479_1597 M479_1597 M479_1597 1767205 1767816 + hhH-GPD superbase excision DNA repair family protein [L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1597 M479_1598 M479_1598 M479_1598 1768002 1768478 - death-on-curing family protein DOC_P1: death-on-curing family protein~[R] COG3654 Prophage maintenance system killer protein gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1598 M479_1599 M479_1599 M479_1599 1768489 1768668 - putative phage protein gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1599 M479_16 M479_16 iolC iolC 22125 24095 + 5-dehydro-2-deoxygluconokinase myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase~[G] COG0524 Sugar kinases%2C ribokinase family gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=M479_16 M479_160 M479_160 moaD moaD 158999 159244 + molybdopterin converting factor%2C subunit 1 moaD: molybdopterin converting factor%2C subunit 1~[H] COG1977 Molybdopterin converting factor%2C small subunit gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=M479_160 M479_1600 M479_1600 fliE fliE 1769088 1769399 - flagellar hook-basal body complex protein FliE fliE: flagellar hook-basal body complex protein FliE~[NU] COG1677 Flagellar hook-basal body protein gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1600 M479_1601 M479_1601 fliF fliF 1769752 1771464 + flagellar M-ring protein FliF fliF: flagellar M-ring protein FliF~[NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1601 M479_1602 M479_1602 fliG fliG 1771461 1772453 + flagellar motor switch protein FliG fliG: flagellar motor switch protein FliG~[N] COG1536 Flagellar motor switch protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1602 M479_1603 M479_1603 M479_1603 1772528 1773157 + flagellar assembly FliH family protein [NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1603 M479_1604 M479_1604 fliI fliI 1773096 1774556 + flagellar protein export ATPase FliI fliI_clade1: flagellar protein export ATPase FliI~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1604 M479_1605 M479_1605 fliJ fliJ 1774656 1775102 + flagellar export protein FliJ flagell_FliJ: flagellar export protein FliJ~[NUO] COG2882 Flagellar biosynthesis chaperone gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1605 M479_1606 M479_1606 M479_1606 1775099 1776451 + flagellar hook-length control FliK family protein [N] COG3144 Flagellar hook-length control protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1606 M479_1607 M479_1607 M479_1607 1776718 1777188 + flagellar basal body-associated FliL family protein [N] COG1580 Flagellar basal body-associated protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1607 M479_1608 M479_1608 fliM fliM 1777194 1778195 + flagellar motor switch protein FliM fliM_switch: flagellar motor switch protein FliM~[N] COG1868 Flagellar motor switch protein gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1608 M479_1609 M479_1609 fliN fliN 1778192 1778608 + flagellar motor switch protein FliN fliN: flagellar motor switch protein FliN~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1609 M479_161 M479_161 M479_161 159247 159699 + moaE family protein [H] COG0314 Molybdopterin converting factor%2C large subunit gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=M479_161 M479_1610 M479_1610 fliO fliO 1778608 1779144 + flagellar biosynthetic protein FliO fliO_TIGR: flagellar biosynthetic protein FliO~[N] COG3190 Flagellar biogenesis protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1610 M479_1611 M479_1611 fliP fliP 1779141 1779965 + flagellar biosynthetic protein FliP fliP: flagellar biosynthetic protein FliP~[NU] COG1338 Flagellar biosynthesis pathway%2C component FliP gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1611 M479_1612 M479_1612 fliQ fliQ 1780071 1780340 + flagellar biosynthetic protein FliQ fliQ: flagellar biosynthetic protein FliQ~[NU] COG1987 Flagellar biosynthesis pathway%2C component FliQ gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1612 M479_1613 M479_1613 fliR fliR 1780343 1781125 + flagellar biosynthetic protein FliR fliR: flagellar biosynthetic protein FliR~[NU] COG1684 Flagellar biosynthesis pathway%2C component FliR gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1613 M479_1614 M479_1614 M479_1614 1781332 1781514 + ycfA-like family protein [N] COG1724 Predicted periplasmic or secreted lipoprotein gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1614 M479_1615 M479_1615 M479_1615 1781559 1781978 + hypothetical protein conserved hypothetical protein~[S] COG1598 Uncharacterized conserved protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1615 M479_1616 M479_1616 M479_1616 1782236 1783195 - pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1616 M479_1617 M479_1617 M479_1617 1783244 1784266 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1617 M479_1618 M479_1618 M479_1618 1784269 1785846 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1618 M479_1619 M479_1619 M479_1619 1785912 1786907 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1619 M479_162 M479_162 M479_162 159842 160552 + inhibitor of apoptosis-promoting Bax1 family protein [R] COG0670 Integral membrane protein%2C interacts with FtsH gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=M479_162 M479_1620 M479_1620 M479_1620 1786950 1788029 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1620 M479_1621 M479_1621 M479_1621 1788159 1790225 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [S] COG3347 Uncharacterized conserved protein gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1621 M479_1622 M479_1622 M479_1622 1790443 1791444 + putative sugar-binding domain protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1622 M479_1623 M479_1623 flgL flgL 1791473 1792453 - flagellar hook-associated protein 3 flagell_flgL: flagellar hook-associated protein 3~[N] COG1344 Flagellin and related hook-associated proteins gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1623 M479_1624 M479_1624 flgK flgK 1792592 1794256 - flagellar hook-associated protein FlgK flgK_ends: flagellar hook-associated protein FlgK~[N] COG1256 Flagellar hook-associated protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1624 M479_1625 M479_1625 flgJ flgJ 1794555 1795499 - flagellar rod assembly protein/muramidase FlgJ flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ~[MNO] COG3951 Rod binding protein gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1625 M479_1626 M479_1626 M479_1626 1795499 1796608 - flagellar P-ring family protein [N] COG1706 Flagellar basal-body P-ring protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1626 M479_1627 M479_1627 M479_1627 1796623 1797282 - flagellar L-ring family protein [N] COG2063 Flagellar basal body L-ring protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1627 M479_1628 M479_1628 flgG flgG 1797456 1798154 - flagellar basal-body rod protein FlgG flgG_G_neg: flagellar basal-body rod protein FlgG~[N] COG4786 Flagellar basal body rod protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1628 M479_1629 M479_1629 M479_1629 1798135 1798764 - flagellar hook-basal body family protein flgEFG_subfam: flagellar hook-basal body family protein~[N] COG4787 Flagellar basal body rod protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1629 M479_163 M479_163 M479_163 160787 161245 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=M479_163 M479_1630 M479_1630 M479_1630 1798786 1800072 - flagellar hook-basal body family protein flgEFG_subfam: flagellar hook-basal body family protein~[N] COG1749 Flagellar hook protein FlgE gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1630 M479_1631 M479_1631 flgD flgD 1800274 1800951 - basal-body rod modification protein flgD [N] COG1843 Flagellar hook capping protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1631 M479_1632 M479_1632 flgC flgC 1800966 1801370 - flagellar basal-body rod protein FlgC flgC: flagellar basal-body rod protein FlgC~[N] COG1558 Flagellar basal body rod protein gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1632 M479_1633 M479_1633 flgB flgB 1801376 1801789 - flagellar basal-body rod protein FlgB flgB: flagellar basal-body rod protein FlgB~[N] COG1815 Flagellar basal body protein gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1633 M479_1634 M479_1634 flgA flgA 1802028 1802726 + flagella basal body P-ring formation protein FlgA flgA_cterm: flagella basal body P-ring formation protein FlgA~[NO] COG1261 Flagellar basal body P-ring biosynthesis protein gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1634 M479_1635 M479_1635 flgM flgM 1802877 1803179 + flagellar biosynthesis anti-sigma factor FlgM flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM~[KNU] COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1635 M479_1636 M479_1636 M479_1636 1803201 1803638 + flgN family protein [NUO] COG3418 Flagellar biosynthesis/type III secretory pathway chaperone gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1636 M479_1637 M479_1637 M479_1637 1803828 1805900 - bacterial Ig-like domain family protein gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1637 M479_1638 M479_1638 M479_1638 1805990 1806448 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1638 M479_1639 M479_1639 M479_1639 1806438 1807448 - hypothetical protein conserved hypothetical protein gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1639 M479_164 M479_164 betA betA 161474 163177 - choline dehydrogenase betA: choline dehydrogenase~[E] COG2303 Choline dehydrogenase and related flavoproteins gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=M479_164 M479_1640 M479_1640 flhE flhE 1808106 1808528 - flagellar protein flhE gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1640 M479_1641 M479_1641 flhA flhA 1808528 1810606 - flagellar biosynthesis protein FlhA flhA: flagellar biosynthesis protein FlhA~[NU] COG1298 Flagellar biosynthesis pathway%2C component FlhA gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1641 M479_1642 M479_1642 flhB flhB 1810606 1811766 - flagellar biosynthetic protein FlhB flhB: flagellar biosynthetic protein FlhB~[NU] COG1377 Flagellar biosynthesis pathway%2C component FlhB gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1642 M479_1643 M479_1643 M479_1643 1812298 1812756 + putative membrane protein gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1643 M479_1644 M479_1644 M479_1644 1812750 1813076 + hypothetical protein conserved hypothetical protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1644 M479_1645 M479_1645 M479_1645 1813599 1813940 - hypothetical protein conserved hypothetical protein gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1645 M479_1646 M479_1646 M479_1646 1814037 1814921 - copper resistance D family protein [P] COG1276 Putative copper export protein gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1646 M479_1647 M479_1647 M479_1647 1814924 1815310 - copC domain protein [R] COG2372 Uncharacterized protein%2C homolog of Cu resistance protein CopC gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1647 M479_1648 M479_1648 M479_1648 1815716 1816225 - ferritin-like domain protein [P] COG1528 Ferritin-like protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1648 M479_1649 M479_1649 M479_1649 1816626 1816856 + DNA polymerase III%2C theta subunit gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1649 M479_165 M479_165 betB betB 163200 164672 - betaine-aldehyde dehydrogenase BADH: betaine-aldehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=M479_165 M479_1650 M479_1650 pip pip 1816916 1817866 - prolyl aminopeptidase pro_imino_pep_1: prolyl aminopeptidase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1650 M479_1651 M479_1651 M479_1651 1818588 1820639 - prolyl oligopeptidase family protein [E] COG1770 Protease II gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1651 M479_1652 M479_1652 M479_1652 1820968 1821378 - yebF-like family protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1652 M479_1653 M479_1653 M479_1653 1821485 1821793 - ASCH domain protein [S] COG3097 Uncharacterized protein conserved in bacteria gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1653 M479_1654 M479_1654 M479_1654 1821833 1822153 - yebG family protein [S] COG3141 Uncharacterized protein conserved in bacteria gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1654 M479_1655 M479_1655 dbpA dbpA 1822247 1823629 - ATP-independent RNA helicase dbpA [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1655 M479_1656 M479_1656 purT purT 1823942 1825123 + phosphoribosylglycinamide formyltransferase 2 purT: phosphoribosylglycinamide formyltransferase 2~[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1656 M479_1657 M479_1657 M479_1657 1825249 1825506 - hypothetical protein conserved hypothetical protein~[S] COG3140 Uncharacterized protein conserved in bacteria gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1657 M479_1658 M479_1658 pabB pabB 1825671 1827047 + aminodeoxychorismate synthase%2C component I pabB: aminodeoxychorismate synthase%2C component I~[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1658 M479_1659 M479_1659 M479_1659 1827071 1827643 + NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1659 M479_166 M479_166 betI betI 164730 165326 - transcriptional repressor BetI betaine_BetI: transcriptional repressor BetI~[K] COG1309 Transcriptional regulator gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=M479_166 M479_1660 M479_1660 M479_1660 1828351 1829715 + L-serine ammonia-lyase sda_mono: L-serine ammonia-lyase~[E] COG1760 L-serine deaminase gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1660 M479_1661 M479_1661 hpaC hpaC 1829995 1830492 - 4-hydroxyphenylacetate 3-monooxygenase%2C reductase component hpaC: 4-hydroxyphenylacetate 3-monooxygenase%2C reductase component~[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases%2C DIM6/NTAB family gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1661 M479_1662 M479_1662 hpaB hpaB 1830513 1832075 - 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component hpaB-2: 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component~[Q] COG2368 Aromatic ring hydroxylase gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1662 M479_1663 M479_1663 hpaX hpaX 1832143 1833510 - 4-hydroxyphenylacetate permease hpaX: 4-hydroxyphenylacetate permease~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1663 M479_1664 M479_1664 hpaI hpaI 1833536 1834342 - 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase hpaI: 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase~[G] COG3836 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1664 M479_1665 M479_1665 hpaH hpaH 1834353 1835156 - 2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase hpaH: 2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase~[Q] COG3971 2-keto-4-pentenoate hydratase gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1665 M479_1666 M479_1666 M479_1666 1835150 1835548 - 5-carboxymethyl-2-hydroxymuconate isomerase family protein [E] COG3232 5-carboxymethyl-2-hydroxymuconate isomerase gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1666 M479_1667 M479_1667 hpaD hpaD 1835573 1836430 - 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase hpaD_Fe: 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase~[S] COG3384 Uncharacterized conserved protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1667 M479_1668 M479_1668 hpaE hpaE 1836549 1837946 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase hpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1668 M479_1669 M479_1669 hpaG hpaG 1837943 1838707 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase hpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C C-terminal subunit~[Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1669 M479_167 M479_167 M479_167 165691 167739 + transporter%2C betaine/carnitine/choline transporter family protein bcct: transporter%2C betaine/carnitine/choline transporter family protein~[M] COG1292 Choline-glycine betaine transporter gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=M479_167 M479_1670 M479_1670 hpaG hpaG 1838704 1839336 - 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase hpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C N-terminal subunit~[Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1670 M479_1671 M479_1671 hpaR hpaR 1839720 1840187 + homoprotocatechuate degradation operon regulator%2C HpaR hpaR: homoprotocatechuate degradation operon regulator%2C HpaR~[K] COG1846 Transcriptional regulators gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1671 M479_1672 M479_1672 M479_1672 1840438 1841832 - integral membrane TerC family protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1672 M479_1673 M479_1673 manX manX 1842543 1843517 + PTS system mannose-specific EIIAB component [G] COG2893 Phosphotransferase system%2C mannose/fructose-specific component IIA gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1673 M479_1674 M479_1674 M479_1674 1843609 1844406 + PTS system%2C mannose/fructose/sorbose%2C IIC component family protein EII-Sor: PTS system%2C mannose/fructose/sorbose%2C IIC component family protein~[G] COG3715 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IIC gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1674 M479_1675 M479_1675 M479_1675 1844422 1845300 + PTS system%2C mannose/fructose/sorbose%2C IID component family protein EIID-AGA: PTS system%2C mannose/fructose/sorbose%2C IID component family protein~[G] COG3716 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IID gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1675 M479_1676 M479_1676 M479_1676 1845500 1845961 + hypothetical protein conserved hypothetical protein~[S] COG4811 Predicted membrane protein gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1676 M479_1677 M479_1677 M479_1677 1846390 1846959 + hypothetical protein conserved hypothetical protein~[S] COG1971 Predicted membrane protein gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1677 M479_1678 M479_1678 fcuA fcuA 1847120 1849396 - ferrichrome receptor fcuA [P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1678 M479_1679 M479_1679 M479_1679 1849755 1851836 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2202 FOG: PAS/PAC domain gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1679 M479_168 M479_168 M479_168 167971 168864 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=M479_168 M479_1680 M479_1680 M479_1680 1852058 1852336 + hypothetical protein conserved hypothetical protein gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1680 M479_1681 M479_1681 M479_1681 1852558 1853397 - ubiE/COQ5 methyltransferase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1681 M479_1682 M479_1682 M479_1682 1853813 1854568 + multi-copper polyphenol oxidoreductase laccase family protein [S] COG1496 Uncharacterized conserved protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1682 M479_1683 M479_1683 cspC cspC 1854659 1854868 - cold shock-like protein CspC [K] COG1278 Cold shock proteins gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1683 M479_1684 M479_1684 M479_1684 1855464 1855628 + hypothetical protein conserved hypothetical protein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1684 M479_1685 M479_1685 M479_1685 1856029 1856628 + antimicrobial peptide resistance and lipid A acylation PagP family protein gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1685 M479_1686 M479_1686 M479_1686 1856933 1858306 - amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1686 M479_1687 M479_1687 M479_1687 1858618 1858788 - hypothetical protein conserved hypothetical protein gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1687 M479_1688 M479_1688 M479_1688 1858897 1859196 - hypothetical protein conserved hypothetical protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1688 M479_1689 M479_1689 M479_1689 1859459 1859734 - yebO-like family protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1689 M479_169 M479_169 M479_169 168902 169783 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=M479_169 M479_1690 M479_1690 M479_1690 1860345 1860578 + yobH-like family protein gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1690 M479_1691 M479_1691 M479_1691 1860669 1860908 - hypothetical protein conserved hypothetical protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1691 M479_1692 M479_1692 M479_1692 1861120 1861233 - putative membrane protein gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1692 M479_1693 M479_1693 M479_1693 1861464 1861850 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1693 M479_1694 M479_1694 M479_1694 1861932 1862096 - putative membrane protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1694 M479_1695 M479_1695 M479_1695 1862752 1864470 + ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1695 M479_1696 M479_1696 M479_1696 1864587 1865045 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1696 M479_1697 M479_1697 M479_1697 1865283 1866134 + RIO1 family protein [TD] COG1718 Serine/threonine protein kinase involved in cell cycle control gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1697 M479_1698 M479_1698 M479_1698 1866371 1866655 + YCII-related domain protein [S] COG2350 Uncharacterized protein conserved in bacteria gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1698 M479_1699 M479_1699 mtfA mtfA 1867045 1867857 + protein mtfA [S] COG3228 Uncharacterized protein conserved in bacteria gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1699 M479_17 M479_17 iolE iolE 24116 25168 + myo-inosose-2 dehydratase myo_inos_iolE: myo-inosose-2 dehydratase~[G] COG1082 Sugar phosphate isomerases/epimerases gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=M479_17 M479_170 M479_170 xapA xapA 170096 170959 + xanthosine phosphorylase XAPA: xanthosine phosphorylase~[F] COG0005 Purine nucleoside phosphorylase gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=M479_170 M479_1700 M479_1700 M479_1700 1868035 1868110 + tRNA-Asn tRNA gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1700 M479_1701 M479_1701 M479_1701 1868258 1869274 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1701 M479_1702 M479_1702 lacY lacY 1869629 1870936 + lactose permease [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1702 M479_1703 M479_1703 M479_1703 1871014 1873140 + melibiase family protein [G] COG3345 Alpha-galactosidase gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1703 M479_1704 M479_1704 M479_1704 1873157 1873321 + hypothetical protein conserved hypothetical protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1704 M479_1705 M479_1705 M479_1705 1873388 1873489 - hypothetical protein conserved hypothetical protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1705 M479_1706 M479_1706 M479_1706 1873527 1874267 - 4'-phosphopantetheinyl transferase superfamily protein [Q] COG2977 Phosphopantetheinyl transferase component of siderophore synthetase gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1706 M479_1707 M479_1707 M479_1707 1874790 1875782 + TRAP transporter solute receptor%2C DctP family protein dctP: TRAP transporter solute receptor%2C DctP family protein~[G] COG1638 TRAP-type C4-dicarboxylate transport system%2C periplasmic component gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1707 M479_1708 M479_1708 M479_1708 1875906 1876412 + tripartite ATP-independent periplasmic transporter%2C DctQ component family protein [G] COG3090 TRAP-type C4-dicarboxylate transport system%2C small permease component gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1708 M479_1709 M479_1709 M479_1709 1876432 1877724 + TRAP transporter%2C DctM subunit dctM: TRAP transporter%2C DctM subunit~[G] COG1593 TRAP-type C4-dicarboxylate transport system%2C large permease component gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1709 M479_171 M479_171 M479_171 171098 171688 + lacY proton/sugar symporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=M479_171 M479_1710 M479_1710 M479_1710 1877982 1878611 + bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1710 M479_1711 M479_1711 M479_1711 1879057 1879132 + tRNA-Asn tRNA gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1711 M479_1712 M479_1712 M479_1712 1879478 1880017 - hypothetical protein conserved hypothetical protein~[S] COG3122 Uncharacterized protein conserved in bacteria gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1712 M479_1713 M479_1713 M479_1713 1880107 1880802 - putative exported protein gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1713 M479_1714 M479_1714 M479_1714 1881379 1882260 + polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1714 M479_1715 M479_1715 M479_1715 1882296 1883636 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1715 M479_1716 M479_1716 M479_1716 1883664 1885061 - MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1716 M479_1717 M479_1717 argG argG 1885388 1886755 + argininosuccinate synthase argG: argininosuccinate synthase~[E] COG0137 Argininosuccinate synthase gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1717 M479_1718 M479_1718 lldD lldD 1886960 1888105 - L-lactate dehydrogenase [cytochrome] [C] COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1718 M479_1719 M479_1719 M479_1719 1888150 1888323 - hypothetical protein gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1719 M479_172 M479_172 M479_172 171887 172345 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=M479_172 M479_1720 M479_1720 M479_1720 1888402 1889679 - methylaspartate ammonia-lyase family protein [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1720 M479_1721 M479_1721 M479_1721 1889711 1890553 - fumarylacetoacetate (FAA) hydrolase family protein [Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1721 M479_1722 M479_1722 M479_1722 1890601 1891341 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1722 M479_1723 M479_1723 M479_1723 1891769 1892191 + hypothetical protein conserved hypothetical protein~[S] COG3011 Uncharacterized protein conserved in bacteria gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1723 M479_1724 M479_1724 M479_1724 1892200 1893504 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1724 M479_1725 M479_1725 M479_1725 1897644 1898852 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1725 M479_1726 M479_1726 M479_1726 1894529 1897681 + bacterial Ig-like domain family protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1726 M479_1727 M479_1727 M479_1727 1899223 1899540 - hypothetical protein conserved hypothetical protein~[S] COG2926 Uncharacterized protein conserved in bacteria gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1727 M479_1728 M479_1728 M479_1728 1899974 1901083 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1728 M479_1729 M479_1729 M479_1729 1901376 1902806 + hypothetical protein exonuclease C-terminal family protein~[L] COG2925 Exonuclease I gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1729 M479_173 M479_173 M479_173 172760 173689 + hypothetical protein conserved hypothetical protein~[S] COG3595 Uncharacterized conserved protein gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=M479_173 M479_1730 M479_1730 M479_1730 1903664 1905055 - amino acid permease family protein [E] COG0531 Amino acid transporters gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1730 M479_1731 M479_1731 M479_1731 1905045 1905260 - hypothetical protein conserved hypothetical protein gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1731 M479_1732 M479_1732 M479_1732 1905514 1906605 - iron-containing alcohol dehydrogenase family protein [C] COG0371 Glycerol dehydrogenase and related enzymes gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1732 M479_1733 M479_1733 M479_1733 1906891 1907784 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1733 M479_1734 M479_1734 M479_1734 1907742 1908464 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1734 M479_1735 M479_1735 M479_1735 1908461 1909456 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1735 M479_1736 M479_1736 M479_1736 1909725 1910135 + putative exported protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1736 M479_1737 M479_1737 M479_1737 1910290 1911117 - rmlD substrate binding domain protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1737 M479_1738 M479_1738 hisG hisG 1911823 1912722 + ATP phosphoribosyltransferase hisG: ATP phosphoribosyltransferase~[E] COG0040 ATP phosphoribosyltransferase gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1738 M479_1739 M479_1739 hisD hisD 1912726 1914057 + histidinol dehydrogenase hisD: histidinol dehydrogenase~[E] COG0141 Histidinol dehydrogenase gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1739 M479_174 M479_174 M479_174 173989 174927 + dihydrouridine synthase family protein [J] COG0042 tRNA-dihydrouridine synthase gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=M479_174 M479_1740 M479_1740 hisC hisC 1914060 1915208 + histidinol-phosphate transaminase hisC: histidinol-phosphate transaminase~[E] COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1740 M479_1741 M479_1741 hisB hisB 1915205 1916272 + histidinol-phosphatase hisB_Nterm: histidinol-phosphatase~[E] COG0131 Imidazoleglycerol-phosphate dehydratase gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1741 M479_1742 M479_1742 hisH hisH 1916272 1916862 + imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit IMP_synth_hisH: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~[E] COG0118 Glutamine amidotransferase gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1742 M479_1743 M479_1743 hisA hisA 1916868 1917605 + 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase [E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1743 M479_1744 M479_1744 hisF hisF 1917587 1918363 + imidazole glycerol phosphate synthase subunit hisF [E] COG0107 Imidazoleglycerol-phosphate synthase gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1744 M479_1745 M479_1745 hisE hisE 1918357 1918971 + phosphoribosyl-ATP diphosphatase histidine_hisI: phosphoribosyl-ATP diphosphatase~[E] COG0139 Phosphoribosyl-AMP cyclohydrolase gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1745 M479_1746 M479_1746 gnd gnd 1919171 1920580 - 6-phosphogluconate dehydrogenase gnd: 6-phosphogluconate dehydrogenase~[G] COG0362 6-phosphogluconate dehydrogenase gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1746 M479_1747 M479_1747 galU galU 1920966 1921859 - UTP--glucose-1-phosphate uridylyltransferase galU: UTP--glucose-1-phosphate uridylyltransferase~[M] COG1210 UDP-glucose pyrophosphorylase gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1747 M479_1748 M479_1748 galU galU 1921943 1922833 - UTP--glucose-1-phosphate uridylyltransferase galU: UTP--glucose-1-phosphate uridylyltransferase~[M] COG1210 UDP-glucose pyrophosphorylase gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1748 M479_1749 M479_1749 M479_1749 1923779 1925593 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1749 M479_175 M479_175 M479_175 175001 175180 - putative membrane protein gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=M479_175 M479_1750 M479_1750 M479_1750 1925806 1928067 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1750 M479_1751 M479_1751 M479_1751 1928157 1929236 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1751 M479_1752 M479_1752 M479_1752 1929233 1930273 + fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1752 M479_1753 M479_1753 M479_1753 1930260 1931300 + fecCD transport family protein [P] COG4779 ABC-type enterobactin transport system%2C permease component gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1753 M479_1754 M479_1754 M479_1754 1931327 1932145 + ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1754 M479_1755 M479_1755 M479_1755 1932254 1934098 - iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1755 M479_1756 M479_1756 M479_1756 1934095 1934673 - acetyltransferase domain protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1756 M479_1757 M479_1757 M479_1757 1934673 1935971 - pyridine nucleotide-disulfide oxidoreductase family protein [Q] COG3486 Lysine/ornithine N-monooxygenase gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1757 M479_1758 M479_1758 M479_1758 1936006 1937553 - beta-eliminating lyase family protein [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1758 M479_1759 M479_1759 fhuF fhuF 1937705 1938484 - siderophore-iron reductase FhuF fe_III_red_FhuF: siderophore-iron reductase FhuF~[R] COG4114 Uncharacterized Fe-S protein gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1759 M479_176 M479_176 M479_176 175519 176454 + D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=M479_176 M479_1760 M479_1760 M479_1760 1938926 1940512 + integral membrane TerC family protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1760 M479_1761 M479_1761 M479_1761 1940657 1942513 - asmA family protein [M] COG2982 Uncharacterized protein involved in outer membrane biogenesis gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1761 M479_1762 M479_1762 dcd dcd 1942700 1943281 - deoxycytidine triphosphate deaminase dCTP_deam: deoxycytidine triphosphate deaminase~[F] COG0717 Deoxycytidine deaminase gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1762 M479_1763 M479_1763 udk udk 1943386 1944027 - uridine kinase udk: uridine kinase~[F] COG0572 Uridine kinase gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1763 M479_1764 M479_1764 M479_1764 1944272 1945384 - 4Fe-4S iron sulfur cluster binding s%2C NifH/frxC family protein [D] COG0489 ATPases involved in chromosome partitioning gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1764 M479_1765 M479_1765 metG metG 1945649 1947676 + methionine--tRNA ligase metG: methionine--tRNA ligase~[J] COG0143 Methionyl-tRNA synthetase gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1765 M479_1766 M479_1766 M479_1766 1947840 1948298 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1766 M479_1767 M479_1767 M479_1767 1948516 1949178 - putative membrane protein gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1767 M479_1768 M479_1768 M479_1768 1949876 1950952 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1768 M479_1769 M479_1769 M479_1769 1950988 1952223 + LVIVD repeat family protein [S] COG5276 Uncharacterized conserved protein gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1769 M479_177 M479_177 M479_177 176575 178287 - FAD binding domain protein [C] COG0277 FAD/FMN-containing dehydrogenases gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=M479_177 M479_1770 M479_1770 M479_1770 1952556 1953737 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1770 M479_1771 M479_1771 M479_1771 1953979 1954386 + lrgA family protein [R] COG1380 Putative effector of murein hydrolase LrgA gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1771 M479_1772 M479_1772 yohK yohK 1954383 1955078 + inner membrane protein yohK [M] COG1346 Putative effector of murein hydrolase gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1772 M479_1773 M479_1773 cdd cdd 1955414 1956298 + cytidine deaminase cyt_deam_dimer: cytidine deaminase~[F] COG0295 Cytidine deaminase gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1773 M479_1774 M479_1774 M479_1774 1956654 1958351 + malic enzyme%2C NAD binding domain protein [C] COG0281 Malic enzyme gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1774 M479_1775 M479_1775 M479_1775 1958632 1959369 + hypothetical protein conserved hypothetical protein~[S] COG2949 Uncharacterized membrane protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1775 M479_1776 M479_1776 M479_1776 1959814 1960029 - branched-chain amino acid transport system / permease component family protein [G] COG4211 ABC-type glucose/galactose transport system%2C permease component gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1776 M479_1777 M479_1777 M479_1777 1960088 1961890 + helix-turn-helix family protein [L] COG1484 DNA replication protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1777 M479_1778 M479_1778 M479_1778 1961900 1962784 - branched-chain amino acid transport system / permease component family protein [G] COG4211 ABC-type glucose/galactose transport system%2C permease component gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1778 M479_1779 M479_1779 M479_1779 1962805 1964319 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1779 M479_178 M479_178 cyaB cyaB 178497 179036 + adenylate cyclase 2 [F] COG1437 Adenylate cyclase%2C class 2 (thermophilic) gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=M479_178 M479_1780 M479_1780 mglB mglB 1964549 1965541 - D-galactose-binding periplasmic protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1780 M479_1781 M479_1781 M479_1781 1966289 1967455 - hypothetical protein conserved hypothetical protein~[S] COG2311 Predicted membrane protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1781 M479_1782 M479_1782 folE folE 1967510 1968172 - GTP cyclohydrolase I folE: GTP cyclohydrolase I~[H] COG0302 GTP cyclohydrolase I gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1782 M479_1783 M479_1783 M479_1783 1968356 1969507 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1783 M479_1784 M479_1784 M479_1784 1969643 1970512 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1784 M479_1785 M479_1785 M479_1785 1970787 1971926 + S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase~[C] COG1062 Zn-dependent alcohol dehydrogenases%2C class III gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1785 M479_1786 M479_1786 fghA fghA 1971947 1972789 + S-formylglutathione hydrolase fghA_ester_D: S-formylglutathione hydrolase~[R] COG0627 Predicted esterase gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1786 M479_1787 M479_1787 M479_1787 1973058 1973258 + hypothetical protein conserved hypothetical protein gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1787 M479_1788 M479_1788 M479_1788 1973342 1975702 + macB-like periplasmic core domain protein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1788 M479_1789 M479_1789 M479_1789 1975704 1976966 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1789 M479_179 M479_179 M479_179 179062 179403 - HNH endonuclease family protein gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=M479_179 M479_1790 M479_1790 M479_1790 1976968 1977636 + ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1790 M479_1791 M479_1791 M479_1791 1977646 1978956 + radical SAM additional 4Fe4S-binding SPASM domain protein rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain protein~[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1791 M479_1792 M479_1792 M479_1792 1979491 1980765 + molybdenum cofactor synthesis domain protein molyb_syn: molybdenum cofactor synthesis domain protein~[H] COG0303 Molybdopterin biosynthesis enzyme gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1792 M479_1793 M479_1793 moeB moeB 1980767 1981537 + molybdopterin synthase sulfurylase MoeB moeB: molybdopterin synthase sulfurylase MoeB~[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1793 M479_1794 M479_1794 M479_1794 1981602 1982255 - hypothetical protein conserved hypothetical protein gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1794 M479_1795 M479_1795 ccmA ccmA 1982483 1984078 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1795 M479_1796 M479_1796 M479_1796 1984761 1985384 + hypothetical protein conserved hypothetical protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1796 M479_1797 M479_1797 M479_1797 1985596 1986963 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1797 M479_1798 M479_1798 M479_1798 1986988 1987440 - lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1798 M479_1799 M479_1799 M479_1799 1987440 1987928 - type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1799 M479_18 M479_18 iolB iolB 25178 25993 + 5-deoxy-glucuronate isomerase myo_inos_iolB: 5-deoxy-glucuronate isomerase~[G] COG3718 Uncharacterized enzyme involved in inositol metabolism gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=M479_18 M479_180 M479_180 M479_180 179716 180819 + suppressor of fused family protein gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=M479_180 M479_1800 M479_1800 M479_1800 1987996 1989081 - hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1800 M479_1801 M479_1801 M479_1801 1989045 1990808 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1801 M479_1802 M479_1802 M479_1802 1991029 1991499 - hypothetical protein gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1802 M479_1803 M479_1803 M479_1803 1991499 1992557 - PAAR motif family protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1803 M479_1804 M479_1804 M479_1804 1992575 1994176 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1804 M479_1805 M479_1805 M479_1805 1994220 1997642 - intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1805 M479_1806 M479_1806 M479_1806 1997639 1998871 - hypothetical protein conserved hypothetical protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1806 M479_1807 M479_1807 M479_1807 2000817 2000984 - hypothetical protein gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1807 M479_1808 M479_1808 M479_1808 2001679 2003862 - peptidase M23 family protein gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1808 M479_1809 M479_1809 M479_1809 2001583 2001684 + hypothetical protein gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1809 M479_181 M479_181 M479_181 181004 181252 + transglycosylase associated family protein [S] COG2261 Predicted membrane protein gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=M479_181 M479_1810 M479_1810 M479_1810 2003878 2004138 - hypothetical protein conserved hypothetical protein~[S] COG4253 Uncharacterized protein conserved in bacteria gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1810 M479_1811 M479_1811 M479_1811 2004292 2005065 - putative exported protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1811 M479_1812 M479_1812 M479_1812 2005062 2007362 - peptidase M23 family protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1812 M479_1813 M479_1813 M479_1813 2007378 2009726 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1813 M479_1814 M479_1814 clpV clpV 2009729 2012371 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1814 M479_1815 M479_1815 M479_1815 2012759 2013250 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1815 M479_1816 M479_1816 M479_1816 2013254 2014990 - ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1816 M479_1817 M479_1817 M479_1817 2014990 2015676 - type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1817 M479_1818 M479_1818 M479_1818 2015673 2017025 - hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1818 M479_1819 M479_1819 M479_1819 2017037 2018581 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1819 M479_182 M479_182 phnC phnC 181460 182296 + phosphonate ABC transporter%2C ATP-binding protein ABC_phnC: phosphonate ABC transporter%2C ATP-binding protein~[P] COG3638 ABC-type phosphate/phosphonate transport system%2C ATPase component gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=M479_182 M479_1820 M479_1820 M479_1820 2018630 2019130 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1820 M479_1821 M479_1821 M479_1821 2019950 2020063 - hypothetical protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1821 M479_1822 M479_1822 pksC pksC 2020119 2020967 - polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksC [I] COG0331 (acyl-carrier-protein) S-malonyltransferase gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1822 M479_1823 M479_1823 M479_1823 2021066 2021314 - phosphopantetheine attachment site family protein [IQ] COG0236 Acyl carrier protein gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1823 M479_1824 M479_1824 M479_1824 2021352 2021684 - lipocalin-like domain protein gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1824 M479_1825 M479_1825 M479_1825 2021879 2022667 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1825 M479_1826 M479_1826 M479_1826 2022670 2023422 - enoyl-CoA hydratase/isomerase family protein [I] COG1024 Enoyl-CoA hydratase/carnithine racemase gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1826 M479_1827 M479_1827 M479_1827 2023424 2024143 - enoyl-CoA hydratase/isomerase family protein [I] COG1024 Enoyl-CoA hydratase/carnithine racemase gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1827 M479_1828 M479_1828 M479_1828 2024136 2025374 - 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein [I] COG3425 3-hydroxy-3-methylglutaryl CoA synthase gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1828 M479_1829 M479_1829 M479_1829 2025390 2026136 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1829 M479_183 M479_183 phnD phnD 182333 183262 + phosphonate ABC transporter%2C periplasmic phosphonate binding protein phnD: phosphonate ABC transporter%2C periplasmic phosphonate binding protein~[P] COG3221 ABC-type phosphate/phosphonate transport system%2C periplasmic component gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=M479_183 M479_1830 M479_1830 M479_1830 2026129 2027412 - hypothetical protein beta-ketoacyl synthase%2C C-terminal domain protein~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1830 M479_1831 M479_1831 M479_1831 2027402 2027926 - fabA-like domain protein [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1831 M479_1832 M479_1832 M479_1832 2028190 2028510 - hypothetical protein conserved hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1832 M479_1833 M479_1833 M479_1833 2029139 2029885 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1833 M479_1834 M479_1834 M479_1834 2030039 2032456 + berberine and berberine like family protein [C] COG0277 FAD/FMN-containing dehydrogenases gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1834 M479_1835 M479_1835 cnf1 cnf1 2032890 2034059 - cytotoxic necrotizing factor 1 domain protein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1835 M479_1836 M479_1836 cnf1 cnf1 2034056 2034334 - cytotoxic necrotizing factor 1 domain protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1836 M479_1837 M479_1837 cnf1 cnf1 2034341 2034697 - cytotoxic necrotizing factor 1 domain protein gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1837 M479_1838 M479_1838 M479_1838 2035067 2035354 - DDE domain protein [L] COG3316 Transposase and inactivated derivatives gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1838 M479_1839 M479_1839 M479_1839 2035774 2035861 - tRNA-Ser tRNA gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1839 M479_184 M479_184 phnE phnE 183365 184225 + phosphonate ABC transporter%2C permease protein PhnE phnE: phosphonate ABC transporter%2C permease protein PhnE~[P] COG3639 ABC-type phosphate/phosphonate transport system%2C permease component gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=M479_184 M479_1840 M479_1840 tusE tusE 2036102 2036431 + sulfur relay%2C TusE/DsrC/DsvC family protein dsrC_tusE_dsvC: sulfur relay%2C TusE/DsrC/DsvC family protein~[P] COG2920 Dissimilatory sulfite reductase (desulfoviridin)%2C gamma subunit gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1840 M479_1841 M479_1841 M479_1841 2036483 2036761 - acylphosphatase family protein [C] COG1254 Acylphosphatases gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1841 M479_1842 M479_1842 M479_1842 2036855 2038045 + met-10+ like-family protein [R] COG1092 Predicted SAM-dependent methyltransferases gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1842 M479_1843 M479_1843 M479_1843 2038106 2038423 + hemimethylated DNA binding domain protein yccV: hemimethylated DNA binding domain protein~[S] COG3785 Uncharacterized conserved protein gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1843 M479_1844 M479_1844 M479_1844 2038532 2038948 - coA binding domain protein [R] COG1832 Predicted CoA-binding protein gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1844 M479_1845 M479_1845 M479_1845 2039264 2039944 + hypothetical protein conserved hypothetical protein~[S] COG3110 Uncharacterized protein conserved in bacteria gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1845 M479_1846 M479_1846 mgsA mgsA 2040123 2040587 + methylglyoxal synthase MGSA: methylglyoxal synthase~[G] COG1803 Methylglyoxal synthase gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1846 M479_1847 M479_1847 M479_1847 2040648 2042702 - hypothetical protein uvrD/REP helicase N-terminal domain protein~[L] COG0210 Superfamily I DNA and RNA helicases gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1847 M479_1848 M479_1848 M479_1848 2042896 2043342 + hypothetical protein conserved hypothetical protein~[S] COG3304 Predicted membrane protein gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1848 M479_1849 M479_1849 M479_1849 2043372 2045510 + integral membrane%2C YccS/YhfK family protein YCCS_YHJK: integral membrane%2C YccS/YhfK family protein~[S] COG1289 Predicted membrane protein gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1849 M479_185 M479_185 phnE phnE 184228 185109 + phosphonate ABC transporter%2C permease protein PhnE phnE: phosphonate ABC transporter%2C permease protein PhnE~[P] COG3639 ABC-type phosphate/phosphonate transport system%2C permease component gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=M479_185 M479_1850 M479_1850 M479_1850 2045612 2046247 - hypothetical protein tfoX N-terminal domain protein~[K] COG3070 Regulator of competence-specific genes gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1850 M479_1851 M479_1851 M479_1851 2046476 2046982 + cell division inhibitor SulA family protein [D] COG5404 SOS-response cell division inhibitor%2C blocks FtsZ ring formation gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1851 M479_1852 M479_1852 ompA ompA 2047340 2048401 + outer membrane protein A [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1852 M479_1853 M479_1853 M479_1853 2048592 2049050 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1853 M479_1854 M479_1854 M479_1854 2049219 2049674 - organizer of macrodomain of Terminus of chromosome family protein [S] COG3120 Uncharacterized protein conserved in bacteria gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1854 M479_1855 M479_1855 M479_1855 2050053 2051636 + hypothetical protein lon protease (S16) C-terminal proteolytic domain protein~[O] COG1067 Predicted ATP-dependent protease gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1855 M479_1856 M479_1856 fabA fabA 2051705 2052223 + beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA~[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1856 M479_1857 M479_1857 M479_1857 2052489 2052677 - putative membrane protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1857 M479_1858 M479_1858 M479_1858 2052923 2053297 + hypothetical protein beta-ketoacyl synthase%2C N-terminal domain protein~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1858 M479_1859 M479_1859 M479_1859 2053311 2055110 + helix-turn-helix family protein [L] COG1484 DNA replication protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1859 M479_186 M479_186 M479_186 185355 185828 + hypothetical protein conserved hypothetical protein~[S] COG4807 Uncharacterized protein conserved in bacteria gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=M479_186 M479_1860 M479_1860 M479_1860 2055126 2056154 + hypothetical protein thiolase%2C N-terminal domain protein~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1860 M479_1861 M479_1861 M479_1861 2056271 2056729 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1861 M479_1862 M479_1862 acpS acpS 2056931 2057311 - holo-[acyl-carrier-protein] synthase acpS: holo-[acyl-carrier-protein] synthase~[I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1862 M479_1863 M479_1863 pdxJ pdxJ 2057311 2058042 - pyridoxine 5'-phosphate synthase pdxJ: pyridoxine 5'-phosphate synthase~[H] COG0854 Pyridoxal phosphate biosynthesis protein gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1863 M479_1864 M479_1864 recO recO 2058201 2058926 - DNA repair protein RecO reco: DNA repair protein RecO~[L] COG1381 Recombinational DNA repair protein (RecF pathway) gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1864 M479_1865 M479_1865 era era 2058936 2059847 - GTP-binding protein Era era: GTP-binding protein Era~[R] COG1159 GTPase gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1865 M479_1866 M479_1866 rnc rnc 2059844 2060524 - ribonuclease III RNaseIII: ribonuclease III~[K] COG0571 dsRNA-specific ribonuclease gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1866 M479_1867 M479_1867 lepB lepB 2060876 2061874 - signal peptidase I sigpep_I_bact: signal peptidase I~[U] COG0681 Signal peptidase I gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1867 M479_1868 M479_1868 lepA lepA 2061884 2063683 - elongation factor 4 lepA: elongation factor 4~[M] COG0481 Membrane GTPase LepA gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1868 M479_1869 M479_1869 M479_1869 2064183 2065037 + putative membrane protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1869 M479_187 M479_187 M479_187 186256 187524 + periplasmic binding domain protein [E] COG0683 ABC-type branched-chain amino acid transport systems%2C periplasmic component gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=M479_187 M479_1870 M479_1870 M479_1870 2065058 2065513 - positive regulator of sigma(E)%2C RseC/MucC family protein [T] COG3086 Positive regulator of sigma E activity gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1870 M479_1871 M479_1871 M479_1871 2065510 2066466 - mucB/RseB family protein [T] COG3026 Negative regulator of sigma E activity gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1871 M479_1872 M479_1872 M479_1872 2066466 2067122 - hypothetical protein anti sigma-E RseA%2C N-terminal domain protein~[T] COG3073 Negative regulator of sigma E activity gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1872 M479_1873 M479_1873 rpoE rpoE 2067148 2067723 - RNA polymerase sigma factor RpoE rpoE_Sigma70: RNA polymerase sigma factor RpoE~[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1873 M479_1874 M479_1874 nadB nadB 2067947 2069548 + L-aspartate oxidase nadB: L-aspartate oxidase~[H] COG0029 Aspartate oxidase gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1874 M479_1875 M479_1875 M479_1875 2069831 2070586 - methyltransferase small domain protein [R] COG4123 Predicted O-methyltransferase gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1875 M479_1876 M479_1876 M479_1876 2070829 2072145 + DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1876 M479_1877 M479_1877 M479_1877 2072173 2072322 - hypothetical protein conserved hypothetical protein gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1877 M479_1878 M479_1878 M479_1878 2072276 2072932 - ankyrin repeat family protein [R] COG0666 FOG: Ankyrin repeat gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1878 M479_1879 M479_1879 M479_1879 2072919 2073017 - hypothetical protein conserved hypothetical protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1879 M479_188 M479_188 urtB urtB 187702 189249 + urea ABC transporter%2C permease protein UrtB urea_trans_UrtB: urea ABC transporter%2C permease protein UrtB~[E] COG0559 Branched-chain amino acid ABC-type transport system%2C permease components gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=M479_188 M479_1880 M479_1880 phlA phlA 2073010 2073972 - extracellular phospholipase A1 gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1880 M479_1881 M479_1881 grcA grcA 2074151 2074534 - autonomous glycyl radical cofactor GrcA spare_glycyl: autonomous glycyl radical cofactor GrcA~[R] COG3445 Acid-induced glycyl radical enzyme gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1881 M479_1882 M479_1882 ung ung 2074887 2075573 + uracil-DNA glycosylase ung: uracil-DNA glycosylase~[L] COG0692 Uracil DNA glycosylase gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1882 M479_1883 M479_1883 pcp pcp 2075664 2076311 - pyroglutamyl-peptidase I pyro_pdase: pyroglutamyl-peptidase I~[O] COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1883 M479_1884 M479_1884 M479_1884 2076321 2077340 - hypothetical protein conserved hypothetical protein~[S] COG3817 Predicted membrane protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1884 M479_1885 M479_1885 M479_1885 2077337 2078068 - hypothetical protein conserved hypothetical protein~[S] COG3819 Predicted membrane protein gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1885 M479_1886 M479_1886 M479_1886 2078153 2078890 - lamB/YcsF family protein [R] COG1540 Uncharacterized proteins%2C homologs of lactam utilization protein B gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1886 M479_1887 M479_1887 M479_1887 2078887 2079837 - hypothetical protein conserved hypothetical protein~[E] COG1984 Allophanate hydrolase subunit 2 gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1887 M479_1888 M479_1888 M479_1888 2079942 2080448 - allophanate hydrolase subunit 1 family protein [E] COG2049 Allophanate hydrolase subunit 1 gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1888 M479_1889 M479_1889 M479_1889 2080866 2081021 + hypothetical protein conserved hypothetical protein gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1889 M479_189 M479_189 urtC urtC 189249 190325 + urea ABC transporter%2C permease protein UrtC urea_trans_UrtC: urea ABC transporter%2C permease protein UrtC~[E] COG4177 ABC-type branched-chain amino acid transport system%2C permease component gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=M479_189 M479_1890 M479_1890 M479_1890 2081106 2081849 - NIF3 family protein [S] COG0327 Uncharacterized conserved protein gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1890 M479_1891 M479_1891 M479_1891 2081992 2083029 - cAMP phosphodiesterases class-II family protein [T] COG5212 Low-affinity cAMP phosphodiesterase gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1891 M479_1892 M479_1892 M479_1892 2083020 2084483 - FAD binding domain of DNA photolyase family protein [L] COG0415 Deoxyribodipyrimidine photolyase gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1892 M479_1893 M479_1893 M479_1893 2084613 2085095 - hypothetical protein conserved hypothetical protein~[S] COG3272 Uncharacterized conserved protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1893 M479_1894 M479_1894 M479_1894 2085434 2085640 - hypothetical protein conserved hypothetical protein gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1894 M479_1895 M479_1895 kdpA kdpA 2086135 2087823 + K+-transporting ATPase%2C A subunit kdpA: K+-transporting ATPase%2C A subunit~[P] COG2060 K+-transporting ATPase%2C A chain gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1895 M479_1896 M479_1896 kdpB kdpB 2087917 2089983 + K+-transporting ATPase%2C B subunit kdpB: K+-transporting ATPase%2C B subunit~[P] COG2216 High-affinity K+ transport system%2C ATPase chain B gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1896 M479_1897 M479_1897 kdpC kdpC 2090195 2090797 + K+-transporting ATPase%2C C subunit kdpC: K+-transporting ATPase%2C C subunit~[P] COG2156 K+-transporting ATPase%2C c chain gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1897 M479_1898 M479_1898 M479_1898 2090807 2091703 + osmosensitive K+ channel His kinase sensor domain protein [T] COG2205 Osmosensitive K+ channel histidine kinase gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1898 M479_1899 M479_1899 M479_1899 2091654 2093534 + GAF domain protein [T] COG2205 Osmosensitive K+ channel histidine kinase gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1899 M479_19 M479_19 M479_19 26152 26355 + putative membrane protein gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=M479_19 M479_190 M479_190 urtD urtD 190322 191158 + urea ABC transporter%2C ATP-binding protein UrtD urea_trans_UrtD: urea ABC transporter%2C ATP-binding protein UrtD~[R] COG4674 Uncharacterized ABC-type transport system%2C ATPase component gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=M479_190 M479_1900 M479_1900 M479_1900 2093694 2094323 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1900 M479_1901 M479_1901 M479_1901 2094418 2094846 + eamA-like transporter family protein [S] COG2510 Predicted membrane protein gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1901 M479_1902 M479_1902 M479_1902 2094974 2095216 - hypothetical protein conserved hypothetical protein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1902 M479_1903 M479_1903 M479_1903 2095259 2095372 - hypothetical protein conserved hypothetical protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1903 M479_1904 M479_1904 pgm pgm 2095590 2097233 - phosphoglucomutase%2C alpha-D-glucose phosphate-specific pgm: phosphoglucomutase%2C alpha-D-glucose phosphate-specific~[G] COG0033 Phosphoglucomutase gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1904 M479_1905 M479_1905 seqA seqA 2097306 2097833 - protein seqA [L] COG3057 Negative regulator of replication initiationR gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1905 M479_1906 M479_1906 M479_1906 2098328 2098696 + hypothetical protein conserved hypothetical protein~[S] COG4461 Uncharacterized protein conserved in bacteria%2C putative lipoprotein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1906 M479_1907 M479_1907 M479_1907 2098808 2098984 + putative membrane protein gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1907 M479_1908 M479_1908 M479_1908 2098991 2099752 - ydjC-like family protein [S] COG3394 Uncharacterized protein conserved in bacteria gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1908 M479_1909 M479_1909 chbR chbR 2099804 2100634 - HTH-type transcriptional regulator ChbR [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1909 M479_191 M479_191 urtE urtE 191252 191950 + urea ABC transporter%2C ATP-binding protein UrtE urea_trans_UrtE: urea ABC transporter%2C ATP-binding protein UrtE~[E] COG0410 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=M479_191 M479_1910 M479_1910 chbA chbA 2100683 2101030 - N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIA component [G] COG1447 Phosphotransferase system cellobiose-specific component IIA gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1910 M479_1911 M479_1911 celB celB 2101197 2102429 - PTS system%2C cellobiose-specific IIC component cello_pts_IIC: PTS system%2C cellobiose-specific IIC component~[G] COG1455 Phosphotransferase system cellobiose-specific component IIC gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1911 M479_1912 M479_1912 chbB chbB 2102568 2102885 - N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIB component [G] COG1440 Phosphotransferase system cellobiose-specific component IIB gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1912 M479_1913 M479_1913 M479_1913 2103926 2104306 + crcB-like family protein [D] COG0239 Integral membrane protein possibly involved in chromosome condensation gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1913 M479_1914 M479_1914 M479_1914 2104322 2104726 + crcB-like family protein [D] COG0239 Integral membrane protein possibly involved in chromosome condensation gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1914 M479_1915 M479_1915 M479_1915 2104824 2105999 - trkA-N domain protein [P] COG1226 Kef-type K+ transport systems%2C predicted NAD-binding component gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1915 M479_1916 M479_1916 hdeB hdeB 2106617 2106946 + protein hdeB gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1916 M479_1917 M479_1917 M479_1917 2107115 2108173 - transition metal uptake transporter%2C Ni2+-Co2+ transporter family protein nico: transition metal uptake transporter%2C Ni2+-Co2+ transporter family protein~[P] COG3376 High-affinity nickel permease gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1917 M479_1918 M479_1918 yut yut 2108322 2109314 - urea transporter urea_trans_yut: urea transporter~[E] COG4413 Urea transporter gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1918 M479_1919 M479_1919 M479_1919 2109639 2110472 - ureD urease accessory family protein [O] COG0829 Urease accessory protein UreH gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1919 M479_192 M479_192 M479_192 192065 192922 + hypothetical protein conserved hypothetical protein gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=M479_192 M479_1920 M479_1920 ureG ureG 2110469 2111131 - urease accessory protein UreG ureG: urease accessory protein UreG~[OK] COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1920 M479_1921 M479_1921 M479_1921 2111258 2111944 - ureF family protein [O] COG0830 Urease accessory protein UreF gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1921 M479_1922 M479_1922 M479_1922 2111966 2112661 - hypothetical protein ureE urease accessory%2C C-terminal domain protein~[O] COG2371 Urease accessory protein UreE gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1922 M479_1923 M479_1923 ureC ureC 2112957 2114675 - urease%2C alpha subunit urease_alph: urease%2C alpha subunit~[E] COG0804 Urea amidohydrolase (urease) alpha subunit gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1923 M479_1924 M479_1924 ureB ureB 2114765 2115199 - urease subunit beta [E] COG0832 Urea amidohydrolase (urease) beta subunit gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1924 M479_1925 M479_1925 ureA ureA 2115252 2115554 - urease subunit gamma [E] COG0831 Urea amidohydrolase (urease) gamma subunit gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1925 M479_1926 M479_1926 M479_1926 2116509 2116634 - hypothetical protein conserved hypothetical protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1926 M479_1927 M479_1927 M479_1927 2116753 2117418 - ABC transporter family protein [EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1927 M479_1928 M479_1928 M479_1928 2117411 2118217 - ABC transporter family protein [R] COG1123 ATPase components of various ABC-type transport systems%2C contain duplicated ATPase gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1928 M479_1929 M479_1929 M479_1929 2118217 2119023 - binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1929 M479_193 M479_193 M479_193 192946 194361 + beta-eliminating lyase family protein [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=M479_193 M479_1930 M479_1930 M479_1930 2119020 2119988 - binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1930 M479_1931 M479_1931 M479_1931 2119988 2121565 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1931 M479_1932 M479_1932 cspG cspG 2122393 2122605 - cold shock-like protein CspG [K] COG1278 Cold shock proteins gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1932 M479_1933 M479_1933 M479_1933 2123113 2123451 + mbeD/MobD like family protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1933 M479_1934 M479_1934 M479_1934 2123634 2124083 + hypothetical protein conserved hypothetical protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1934 M479_1935 M479_1935 M479_1935 2124181 2124516 - hypothetical protein conserved hypothetical protein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1935 M479_1936 M479_1936 M479_1936 2124994 2125359 - acid shock repeat family protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1936 M479_1937 M479_1937 nrdH nrdH 2125880 2126116 + glutaredoxin-like NrdH family protein glrX_NrdH: glutaredoxin-like NrdH family protein~[O] COG0695 Glutaredoxin and related proteins gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1937 M479_1938 M479_1938 nrdI nrdI 2126130 2126534 + nrdI protein nrdI: nrdI protein~[F] COG1780 Protein involved in ribonucleotide reduction gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1938 M479_1939 M479_1939 M479_1939 2126585 2128666 + ribonucleoside-diphosphate reductase%2C alpha subunit nrdE_NrdA: ribonucleoside-diphosphate reductase%2C alpha subunit~[F] COG0209 Ribonucleotide reductase%2C alpha subunit gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1939 M479_194 M479_194 M479_194 194579 195433 - rhodanese-like domain protein [P] COG2897 Rhodanese-related sulfurtransferase gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=M479_194 M479_1940 M479_1940 M479_1940 2128791 2129762 + ribonucleotide reductase%2C small chain family protein [F] COG0208 Ribonucleotide reductase%2C beta subunit gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1940 M479_1941 M479_1941 proV proV 2130438 2131637 + glycine betaine/L-proline transport ATP binding subunit proV: glycine betaine/L-proline transport ATP binding subunit~[E] COG4175 ABC-type proline/glycine betaine transport system%2C ATPase component gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1941 M479_1942 M479_1942 M479_1942 2131630 2132784 + binding--dependent transport system inner membrane component family protein [E] COG4176 ABC-type proline/glycine betaine transport system%2C permease component gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1942 M479_1943 M479_1943 M479_1943 2132832 2133836 + substrate binding domain of ABC-type glycine betaine transport system family protein [E] COG2113 ABC-type proline/glycine betaine transport systems%2C periplasmic components gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1943 M479_1944 M479_1944 M479_1944 2134066 2135016 - polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1944 M479_1945 M479_1945 M479_1945 2135355 2136839 + permease for cytosine/purine%2C uracil%2C thiamine%2C allantoin family protein [FH] COG1953 Cytosine/uracil/thiamine/allantoin permeases gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1945 M479_1946 M479_1946 M479_1946 2136896 2136972 - tRNA-Asp tRNA gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1946 M479_1947 M479_1947 dnaQ dnaQ 2137085 2137849 - DNA polymerase III%2C epsilon subunit dnaQ_proteo: DNA polymerase III%2C epsilon subunit~[L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1947 M479_1948 M479_1948 M479_1948 2137919 2138383 + RNase H family protein [L] COG0328 Ribonuclease HI gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1948 M479_1949 M479_1949 M479_1949 2138438 2139157 - methyltransferase domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1949 M479_195 M479_195 M479_195 196169 197101 + substrate binding domain of ABC-type glycine betaine transport system family protein [M] COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=M479_195 M479_1950 M479_1950 gloB gloB 2139202 2139957 + hydroxyacylglutathione hydrolase GSH_gloB: hydroxyacylglutathione hydrolase~[R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1950 M479_1951 M479_1951 M479_1951 2140029 2141417 + lysM domain protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1951 M479_1952 M479_1952 M479_1952 2141460 2142242 - endonuclease/Exonuclease/phosphatase family protein [S] COG3021 Uncharacterized protein conserved in bacteria gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1952 M479_1953 M479_1953 M479_1953 2142603 2143049 - hypothetical protein conserved hypothetical protein gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1953 M479_1954 M479_1954 M479_1954 2143102 2143905 - aldo/keto reductase family protein [R] COG0656 Aldo/keto reductases%2C related to diketogulonate reductase gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1954 M479_1955 M479_1955 M479_1955 2144306 2144382 - tRNA-Asp tRNA gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1955 M479_1956 M479_1956 M479_1956 2144508 2144620 - 5S ribosomal RNA rRNA gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1956 M479_1957 M479_1957 M479_1957 2144734 2147636 - 23S ribosomal RNA rRNA gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1957 M479_1958 M479_1958 M479_1958 2147892 2147967 - tRNA-Glu tRNA gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1958 M479_1959 M479_1959 M479_1959 2148110 2149638 - 16S ribosomal RNA rRNA gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1959 M479_196 M479_196 M479_196 197362 198516 + binding--dependent transport system inner membrane component family protein [E] COG1174 ABC-type proline/glycine betaine transport systems%2C permease component gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=M479_196 M479_1960 M479_1960 gmhB gmhB 2150088 2150654 - D%2CD-heptose 1%2C7-bisphosphate phosphatase [E] COG0241 Histidinol phosphatase and related phosphatases gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1960 M479_1961 M479_1961 metN metN 2150841 2151872 + D-methionine ABC transporter%2C ATP-binding protein ABC_MetN: D-methionine ABC transporter%2C ATP-binding protein~[P] COG1135 ABC-type metal ion transport system%2C ATPase component gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1961 M479_1962 M479_1962 metI metI 2151865 2152518 + D-methionine transport system permease protein metI [P] COG2011 ABC-type metal ion transport system%2C permease component gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1962 M479_1963 M479_1963 metQ metQ 2152582 2153397 + D-methionine-binding lipoprotein metQ [P] COG1464 ABC-type metal ion transport system%2C periplasmic component/surface antigen gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1963 M479_1964 M479_1964 M479_1964 2153515 2153922 + putative protein rcsF gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1964 M479_1965 M479_1965 tsaA tsaA 2153919 2154626 + tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA~[S] COG1720 Uncharacterized conserved protein gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1965 M479_1966 M479_1966 proS proS 2154730 2156448 + proline--tRNA ligase proS_fam_II: proline--tRNA ligase~[J] COG0442 Prolyl-tRNA synthetase gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1966 M479_1967 M479_1967 M479_1967 2156582 2157265 - hypothetical protein nlpE N-terminal domain protein~[MP] COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1967 M479_1968 M479_1968 M479_1968 2157350 2157766 - RF-1 domain protein [J] COG1186 Protein chain release factor B gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1968 M479_1969 M479_1969 M479_1969 2157769 2158317 - yaeQ family protein [S] COG4681 Uncharacterized protein conserved in bacteria gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1969 M479_197 M479_197 M479_197 198513 199451 + ABC transporter family protein [E] COG1125 ABC-type proline/glycine betaine transport systems%2C ATPase components gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=M479_197 M479_1970 M479_1970 M479_1970 2158559 2158759 + hypothetical protein conserved hypothetical protein gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1970 M479_1971 M479_1971 rof rof 2158746 2159006 + protein rof [K] COG4568 Transcriptional antiterminator gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1971 M479_1972 M479_1972 M479_1972 2159271 2159588 - cytochrome c family protein [C] COG2863 Cytochrome c553 gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1972 M479_1973 M479_1973 tilS tilS 2159825 2161207 - tRNA(Ile)-lysidine synthetase lysidine_TilS_N: tRNA(Ile)-lysidine synthetase~[D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1973 M479_1974 M479_1974 M479_1974 2161209 2161607 - glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein [E] COG0346 Lactoylglutathione lyase and related lyases gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1974 M479_1975 M479_1975 accA accA 2161791 2162750 - acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit accA: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~[I] COG0825 Acetyl-CoA carboxylase alpha subunit gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1975 M479_1976 M479_1976 dnaE dnaE 2162763 2166245 - DNA polymerase III%2C alpha subunit polc: DNA polymerase III%2C alpha subunit~[L] COG0587 DNA polymerase III%2C alpha subunit gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1976 M479_1977 M479_1977 rnhB rnhB 2166408 2167004 - ribonuclease HII [L] COG0164 Ribonuclease HII gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1977 M479_1978 M479_1978 lpxB lpxB 2167001 2168185 - lipid-A-disaccharide synthase lpxB: lipid-A-disaccharide synthase~[M] COG0763 Lipid A disaccharide synthetase gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1978 M479_1979 M479_1979 lpxA lpxA 2168189 2168977 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase~[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1979 M479_198 M479_198 M479_198 199448 200284 + binding--dependent transport system inner membrane component family protein [E] COG1174 ABC-type proline/glycine betaine transport systems%2C permease component gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=M479_198 M479_1980 M479_1980 fabZ fabZ 2168981 2169511 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1980 M479_1981 M479_1981 lpxD lpxD 2169669 2170691 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD~[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1981 M479_1982 M479_1982 M479_1982 2170695 2171192 - outer membrane family protein [M] COG2825 Outer membrane protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1982 M479_1983 M479_1983 yaeT yaeT 2171350 2173737 - outer membrane assembly complex%2C YaeT protein OM_YaeT: outer membrane assembly complex%2C YaeT protein~[M] COG4775 Outer membrane protein/protective antigen OMA87 gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1983 M479_1984 M479_1984 rseP rseP 2173774 2175129 - RIP metalloprotease RseP [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1 gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1984 M479_1985 M479_1985 M479_1985 2175158 2176006 - cytidylyltransferase family protein [I] COG0575 CDP-diglyceride synthetase gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1985 M479_1986 M479_1986 uppS uppS 2176016 2176774 - di-trans%2Cpoly-cis-decaprenylcistransferase uppS: di-trans%2Cpoly-cis-decaprenylcistransferase~[I] COG0020 Undecaprenyl pyrophosphate synthase gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1986 M479_1987 M479_1987 dxr dxr 2176998 2178194 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~[I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1987 M479_1988 M479_1988 frr frr 2178408 2178965 - ribosome recycling factor frr: ribosome recycling factor~[J] COG0233 Ribosome recycling factor gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1988 M479_1989 M479_1989 pyrH pyrH 2179101 2179826 - UMP kinase pyrH_bact: UMP kinase~[F] COG0528 Uridylate kinase gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1989 M479_199 M479_199 adiC adiC 200780 202114 + arginine/agmatine antiporter [E] COG0531 Amino acid transporters gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=M479_199 M479_1990 M479_1990 tsf tsf 2180035 2180892 - translation elongation factor Ts tsf: translation elongation factor Ts~[J] COG0264 Translation elongation factor Ts gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1990 M479_1991 M479_1991 rpsB rpsB 2181020 2181745 - ribosomal protein S2 rpsB_bact: ribosomal protein S2~[J] COG0052 Ribosomal protein S2 gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1991 M479_1992 M479_1992 map map 2182180 2182971 + methionine aminopeptidase%2C type I met_pdase_I: methionine aminopeptidase%2C type I~[J] COG0024 Methionine aminopeptidase gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1992 M479_1993 M479_1993 glnD glnD 2183031 2185712 + protein-P-II uridylyltransferase UTase_glnD: protein-P-II uridylyltransferase~[O] COG2844 UTP:GlnB (protein PII) uridylyltransferase gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1993 M479_1994 M479_1994 dapD dapD 2185887 2186711 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase dapD: 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase~[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1994 M479_1995 M479_1995 M479_1995 2186835 2187224 + hypothetical protein conserved hypothetical protein gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1995 M479_1996 M479_1996 M479_1996 2187314 2187763 - flavodoxin family protein [C] COG0716 Flavodoxins gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1996 M479_1997 M479_1997 M479_1997 2187791 2188564 - RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1997 M479_1998 M479_1998 M479_1998 2188564 2188896 - tRNA pseudouridine synthase C family protein [S] COG3098 Uncharacterized protein conserved in bacteria gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1998 M479_1999 M479_1999 M479_1999 2189150 2189608 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=M479_1999 M479_2 M479_2 pbpC pbpC 1173 3518 - penicillin-binding protein 1C PBP_1c: penicillin-binding protein 1C~[M] COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2 M479_20 M479_20 M479_20 26563 28353 + ABC transporter family protein [O] COG5265 ABC-type transport system involved in Fe-S cluster assembly%2C permease and ATPase components gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=M479_20 M479_200 M479_200 M479_200 202184 203464 + orn/Lys/Arg decarboxylase%2C major domain protein [E] COG1982 Arginine/lysine/ornithine decarboxylases gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=M479_200 M479_2000 M479_2000 M479_2000 2190298 2190849 - syd family protein gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2000 M479_2001 M479_2001 queF queF 2190981 2191826 + queuine synthase queF: queuine synthase~[R] COG0780 Enzyme related to GTP cyclohydrolase I gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2001 M479_2002 M479_2002 M479_2002 2191979 2193343 + hypothetical protein conserved hypothetical protein~[R] COG1611 Predicted Rossmann fold nucleotide-binding protein gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2002 M479_2003 M479_2003 M479_2003 2193603 2194358 + hypothetical protein 5'-3' exonuclease%2C C-terminal SAM fold family protein~[L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI) gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2003 M479_2004 M479_2004 M479_2004 2194609 2195715 - ftsJ-like methyltransferase family protein [R] COG2933 Predicted SAM-dependent methyltransferase gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2004 M479_2005 M479_2005 M479_2005 2195708 2196103 - hypothetical protein conserved hypothetical protein~[S] COG2363 Uncharacterized small membrane protein gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2005 M479_2006 M479_2006 gcvA gcvA 2196269 2197186 - glycine cleavage system transcriptional activator [K] COG0583 Transcriptional regulator gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2006 M479_2007 M479_2007 M479_2007 2197650 2197769 - hypothetical protein conserved hypothetical protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2007 M479_2008 M479_2008 csdA csdA 2197846 2199051 + cysteine desulfurase%2C catalytic subunit CsdA feS_syn_CsdA: cysteine desulfurase%2C catalytic subunit CsdA~[E] COG0520 Selenocysteine lyase gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2008 M479_2009 M479_2009 csdE csdE 2199189 2199629 + cysteine desulfurase%2C sulfur acceptor subunit CsdE feS_syn_CsdE: cysteine desulfurase%2C sulfur acceptor subunit CsdE~[R] COG2166 SufE protein probably involved in Fe-S center assembly gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2009 M479_201 M479_201 M479_201 203498 204706 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=M479_201 M479_2010 M479_2010 M479_2010 2199665 2200492 - thiF family protein [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2010 M479_2011 M479_2011 M479_2011 2200635 2201807 - mltA specific insert domain protein [M] COG2821 Membrane-bound lytic murein transglycosylase gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2011 M479_2012 M479_2012 M479_2012 2202023 2202099 + tRNA-Met tRNA gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2012 M479_2013 M479_2013 M479_2013 2202223 2202299 + tRNA-Met tRNA gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2013 M479_2014 M479_2014 M479_2014 2202529 2203779 - N-acetylmuramoyl-L-alanine amidase family protein [M] COG0860 N-acetylmuramoyl-L-alanine amidase gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2014 M479_2015 M479_2015 M479_2015 2204015 2204215 + amino acid kinase family protein [E] COG0548 Acetylglutamate kinase gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2015 M479_2016 M479_2016 M479_2016 2204297 2205319 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2016 M479_2017 M479_2017 M479_2017 2205319 2206098 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2017 M479_2018 M479_2018 argA argA 2206137 2207300 + amino-acid N-acetyltransferase N-Ac-Glu-synth: amino-acid N-acetyltransferase~[E] COG0548 Acetylglutamate kinase gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2018 M479_2019 M479_2019 recD recD 2207455 2209413 - exodeoxyribonuclease V%2C alpha subunit recD: exodeoxyribonuclease V%2C alpha subunit~[L] COG0507 ATP-dependent exoDNAse (exonuclease V)%2C alpha subunit - helicase superfamily I member gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2019 M479_202 M479_202 M479_202 204791 205813 + hypothetical protein orn/Lys/Arg decarboxylase%2C C-terminal domain protein~[E] COG1982 Arginine/lysine/ornithine decarboxylases gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=M479_202 M479_2020 M479_2020 recB recB 2209410 2213072 - exodeoxyribonuclease V%2C beta subunit recB: exodeoxyribonuclease V%2C beta subunit~[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2020 M479_2021 M479_2021 M479_2021 2213069 2215957 - insulinase family protein [O] COG1025 Secreted/periplasmic Zn-dependent peptidases%2C insulinase-like gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2021 M479_2022 M479_2022 recC recC 2216039 2219410 - exodeoxyribonuclease V%2C gamma subunit recC: exodeoxyribonuclease V%2C gamma subunit~[L] COG1330 Exonuclease V gamma subunit gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2022 M479_2023 M479_2023 M479_2023 2219545 2219955 - hypothetical protein conserved hypothetical protein~[NU] COG4967 Tfp pilus assembly protein PilV gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2023 M479_2024 M479_2024 M479_2024 2219943 2220413 - hypothetical protein conserved hypothetical protein gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2024 M479_2025 M479_2025 M479_2025 2220410 2221018 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[U] COG4795 Type II secretory pathway%2C component PulJ gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2025 M479_2026 M479_2026 M479_2026 2221009 2221578 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2026 M479_2027 M479_2027 M479_2027 2221654 2221794 - putative membrane protein gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2027 M479_2028 M479_2028 thyA thyA 2221814 2222608 - thymidylate synthase thym_sym: thymidylate synthase~[F] COG0207 Thymidylate synthase gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2028 M479_2029 M479_2029 lgt lgt 2222615 2223487 - prolipoprotein diacylglyceryl transferase lgt: prolipoprotein diacylglyceryl transferase~[M] COG0682 Prolipoprotein diacylglyceryltransferase gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2029 M479_203 M479_203 M479_203 205931 206134 - hypothetical protein conserved hypothetical protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=M479_203 M479_2030 M479_2030 ptsP ptsP 2223738 2225978 - phosphoenolpyruvate-protein phosphotransferase PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase~[T] COG3605 Signal transduction protein containing GAF and PtsI domains gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2030 M479_2031 M479_2031 rppH rppH 2225997 2226524 - RNA pyrophosphohydrolase [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2031 M479_2032 M479_2032 mutH mutH 2227221 2227907 + DNA mismatch repair endonuclease MutH mutH_TIGR: DNA mismatch repair endonuclease MutH~[L] COG3066 DNA mismatch repair protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2032 M479_2033 M479_2033 M479_2033 2228278 2229318 + aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2033 M479_2034 M479_2034 M479_2034 2229510 2229761 - hypothetical protein conserved hypothetical protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2034 M479_2035 M479_2035 M479_2035 2229909 2230073 + hypothetical protein conserved hypothetical protein~[S] COG3122 Uncharacterized protein conserved in bacteria gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2035 M479_2036 M479_2036 M479_2036 2230102 2231322 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2036 M479_2037 M479_2037 M479_2037 2231319 2233475 - acyltransferase family protein [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2037 M479_2038 M479_2038 M479_2038 2233924 2236185 - molybdopterin oxidoreductase family protein [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2038 M479_2039 M479_2039 lysA lysA 2237514 2238776 - diaminopimelate decarboxylase lysA: diaminopimelate decarboxylase~[E] COG0019 Diaminopimelate decarboxylase gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2039 M479_204 M479_204 M479_204 206259 207149 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=M479_204 M479_2040 M479_2040 M479_2040 2236495 2237517 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2040 M479_2041 M479_2041 M479_2041 2239929 2241089 - sugar (and other) transporter family protein [G] COG2814 Arabinose efflux permease gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2041 M479_2042 M479_2042 M479_2042 2238991 2239932 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2042 M479_2043 M479_2043 M479_2043 2241458 2242366 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2043 M479_2044 M479_2044 M479_2044 2242473 2243360 + metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2044 M479_2045 M479_2045 M479_2045 2244094 2245773 - hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2045 M479_2046 M479_2046 M479_2046 2243473 2244108 + DSBA-like thioredoxin domain protein [O] COG3531 Predicted protein-disulfide isomerase gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2046 M479_2047 M479_2047 M479_2047 2245949 2246350 - hypothetical protein conserved hypothetical protein gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2047 M479_2048 M479_2048 M479_2048 2246347 2246664 - hypothetical protein conserved hypothetical protein~[K] COG3710 DNA-binding winged-HTH domains gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2048 M479_2049 M479_2049 M479_2049 2246707 2247915 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2049 M479_205 M479_205 M479_205 207561 208676 - gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=M479_205 M479_2050 M479_2050 M479_2050 2248077 2248385 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2050 M479_2051 M479_2051 M479_2051 2249018 2249860 - type IV leader peptidase family protein [NOU] COG1989 Type II secretory pathway%2C prepilin signal peptidase PulO and related peptidases gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2051 M479_2052 M479_2052 M479_2052 2248669 2249034 + bacterial chaperone lipo family protein gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2052 M479_2053 M479_2053 M479_2053 2249886 2250335 - putative membrane protein gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2053 M479_2054 M479_2054 gspL gspL 2250344 2251534 - type II secretion system protein L typeII_sec_gspL: type II secretion system protein L~[U] COG3297 Type II secretory pathway%2C component PulL gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2054 M479_2055 M479_2055 M479_2055 2251518 2252474 - type II secretion system (T2SS)%2C K family protein [U] COG3156 Type II secretory pathway%2C component PulK gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2055 M479_2056 M479_2056 gspJ gspJ 2252483 2253079 - type II secretion system protein J gspJ: type II secretion system protein J~[U] COG4795 Type II secretory pathway%2C component PulJ gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2056 M479_2057 M479_2057 M479_2057 2253072 2253362 - type II secretion system (T2SS)%2C I family protein [NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2057 M479_2058 M479_2058 M479_2058 2253454 2253996 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2058 M479_2059 M479_2059 gspG gspG 2254001 2254438 - type II secretion system protein G typeII_sec_gspG: type II secretion system protein G~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2059 M479_206 M479_206 M479_206 208946 211126 + DEAD_2 family protein [KL] COG1199 Rad3-related DNA helicases gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=M479_206 M479_2060 M479_2060 M479_2060 2254458 2255429 - type II secretion system (T2SS)%2C F family protein [NU] COG1459 Type II secretory pathway%2C component PulF gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2060 M479_2061 M479_2061 gspF gspF 2255465 2255659 - general secretion pathway F domain protein gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2061 M479_2062 M479_2062 gspE gspE 2255646 2257157 - type II secretion system protein E type_II_gspE: type II secretion system protein E~[NU] COG2804 Type II secretory pathway%2C ATPase PulE/Tfp pilus assembly pathway%2C ATPase PilB gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2062 M479_2063 M479_2063 gspD gspD 2257154 2259076 - type II secretion system protein D type_II_gspD: type II secretion system protein D~[NU] COG1450 Type II secretory pathway%2C component PulD gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2063 M479_2064 M479_2064 M479_2064 2259157 2259660 - type IV pilus biogenesis family protein gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2064 M479_2065 M479_2065 M479_2065 2259728 2260144 - hypothetical protein conserved hypothetical protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2065 M479_2066 M479_2066 M479_2066 2260887 2261642 - Tat (twin-arginine translocation) pathway signal sequence domain protein TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence domain protein~[P] COG0288 Carbonic anhydrase gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2066 M479_2067 M479_2067 M479_2067 2262138 2262326 + putative hyaluronate lyase gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2067 M479_2068 M479_2068 M479_2068 2262929 2263879 + hypothetical protein conserved hypothetical protein gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2068 M479_2069 M479_2069 M479_2069 2263994 2266180 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[S] COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2069 M479_207 M479_207 katA katA 211194 212633 - catalase [P] COG0753 Catalase gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=M479_207 M479_2070 M479_2070 M479_2070 2266250 2269363 + chondroitin ABC endolyase 1 gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2070 M479_2071 M479_2071 M479_2071 2269708 2270487 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2071 M479_2072 M479_2072 M479_2072 2270487 2271509 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2072 M479_2073 M479_2073 M479_2073 2271755 2272000 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2073 M479_2074 M479_2074 M479_2074 2272452 2274005 - type I phosphodiesterase / nucleotide pyrophosphatase family protein [P] COG3119 Arylsulfatase A and related enzymes gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2074 M479_2075 M479_2075 M479_2075 2274845 2275621 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2075 M479_2076 M479_2076 M479_2076 2275671 2276969 + D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit agaZ_gatZ: D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit~[G] COG4573 Predicted tagatose 6-phosphate kinase gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2076 M479_2077 M479_2077 M479_2077 2276966 2278132 + sugar isomerase%2C AgaS family protein agaS_fam: sugar isomerase%2C AgaS family protein~[M] COG2222 Predicted phosphosugar isomerases gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2077 M479_2078 M479_2078 M479_2078 2278150 2278647 + PTS system%2C mannose/fructose/sorbose%2C IIB component family protein pts-sorbose: PTS system%2C mannose/fructose/sorbose%2C IIB component family protein~[G] COG3444 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IIB gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2078 M479_2079 M479_2079 M479_2079 2278694 2279482 + PTS system sorbose-specific iic component family protein [G] COG3715 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IIC gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2079 M479_208 M479_208 M479_208 212994 213536 + yfaZ family protein gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=M479_208 M479_2080 M479_2080 M479_2080 2279472 2280362 + PTS system mannose/fructose/sorbose IID component family protein [G] COG3716 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IID gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2080 M479_2081 M479_2081 M479_2081 2280448 2280888 + PTS system fructose IIA component family protein [G] COG2893 Phosphotransferase system%2C mannose/fructose-specific component IIA gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2081 M479_2082 M479_2082 nagA nagA 2280891 2282057 + N-acetylglucosamine-6-phosphate deacetylase nagA: N-acetylglucosamine-6-phosphate deacetylase~[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2082 M479_2083 M479_2083 kduD kduD 2282253 2283008 + 2-deoxy-D-gluconate 3-dehydrogenase kduD: 2-deoxy-D-gluconate 3-dehydrogenase~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2083 M479_2084 M479_2084 M479_2084 2283024 2284082 + glycosyl Hydrolase Family 88 family protein [R] COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties%2C and related proteins gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2084 M479_2085 M479_2085 M479_2085 2284326 2285552 + anaerobic sulfatase maturase sulfatase_rSAM: anaerobic sulfatase maturase~[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2085 M479_2086 M479_2086 M479_2086 2285573 2287180 + type I phosphodiesterase / nucleotide pyrophosphatase family protein [P] COG3119 Arylsulfatase A and related enzymes gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2086 M479_2087 M479_2087 M479_2087 2287303 2288790 + hypothetical protein conserved hypothetical protein~[S] COG4289 Uncharacterized protein conserved in bacteria gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2087 M479_2088 M479_2088 M479_2088 2288901 2289755 + class II aldolase%2C tagatose bisphosphate family tag_bisphos_ald: class II aldolase%2C tagatose bisphosphate family~[G] COG0191 Fructose/tagatose bisphosphate aldolase gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2088 M479_2089 M479_2089 M479_2089 2290327 2290608 - hypothetical protein conserved hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2089 M479_209 M479_209 M479_209 213793 215001 - aromatic amino acid transport family protein araaP: aromatic amino acid transport family protein~[E] COG0814 Amino acid permeases gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=M479_209 M479_2090 M479_2090 M479_2090 2289779 2290357 + DJ-1/PfpI family protein [R] COG0693 Putative intracellular protease/amidase gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2090 M479_2091 M479_2091 M479_2091 2290598 2291680 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2091 M479_2092 M479_2092 M479_2092 2292074 2293381 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2092 M479_2093 M479_2093 M479_2093 2293532 2295907 + glycosyl hydrolases 31 family protein [G] COG1501 Alpha-glucosidases%2C family 31 of glycosyl hydrolases gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2093 M479_2094 M479_2094 M479_2094 2296220 2297293 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2094 M479_2095 M479_2095 M479_2095 2297565 2298824 + lamB porin family protein [G] COG4580 Maltoporin (phage lambda and maltose receptor) gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2095 M479_2096 M479_2096 M479_2096 2299197 2299508 - PTS system%2C glucose-like IIB component domain protein EIIB_glc: PTS system%2C glucose-like IIB component domain protein~[G] COG1264 Phosphotransferase system IIB components gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2096 M479_2097 M479_2097 M479_2097 2299620 2300684 - beta-galactosidase family protein [G] COG1874 Beta-galactosidase gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2097 M479_2098 M479_2098 M479_2098 2300696 2301691 - beta-galactosidase family protein [G] COG1874 Beta-galactosidase gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2098 M479_2099 M479_2099 M479_2099 2301742 2302944 - glycosyl hydrolase 53 family protein [G] COG3867 Arabinogalactan endo-1%2C4-beta-galactosidase gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2099 M479_21 M479_21 M479_21 28369 28656 - antibiotic biosynthesis monooxygenase family protein [S] COG1359 Uncharacterized conserved protein gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=M479_21 M479_210 M479_210 M479_210 215620 216813 + molybdenum cofactor synthesis domain protein molyb_syn: molybdenum cofactor synthesis domain protein~[R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=M479_210 M479_2100 M479_2100 M479_2100 2302949 2303800 - binding--dependent transport system inner membrane component family protein [G] COG3833 ABC-type maltose transport systems%2C permease component gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2100 M479_2101 M479_2101 M479_2101 2303812 2305119 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2101 M479_2102 M479_2102 M479_2102 2305279 2306514 - bacterial extracellular solute-binding family protein [G] COG2182 Maltose-binding periplasmic proteins/domains gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2102 M479_2103 M479_2103 M479_2103 2306871 2307971 + ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2103 M479_2104 M479_2104 M479_2104 2308510 2310018 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2104 M479_2105 M479_2105 M479_2105 2310090 2311094 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2105 M479_2106 M479_2106 M479_2106 2311529 2312530 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2106 M479_2107 M479_2107 M479_2107 2313309 2313827 + putative exported protein gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2107 M479_2108 M479_2108 M479_2108 2314203 2315060 + hypothetical protein conserved hypothetical protein gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2108 M479_2109 M479_2109 M479_2109 2315484 2316164 + transcriptional regulator PadR-like family protein [K] COG1695 Predicted transcriptional regulators gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2109 M479_211 M479_211 M479_211 216871 217380 - ecotin family protein [R] COG4574 Serine protease inhibitor ecotin gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=M479_211 M479_2110 M479_2110 M479_2110 2316164 2316484 + hypothetical protein conserved hypothetical protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2110 M479_2111 M479_2111 M479_2111 2316583 2316849 - PAAR motif family protein [S] COG4104 Uncharacterized conserved protein gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2111 M479_2112 M479_2112 M479_2112 2317105 2317884 - putative membrane protein gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2112 M479_2113 M479_2113 M479_2113 2318489 2319256 - hypothetical protein conserved hypothetical protein gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2113 M479_2114 M479_2114 M479_2114 2319226 2321385 - hypothetical protein conserved hypothetical protein gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2114 M479_2115 M479_2115 M479_2115 2321795 2322079 - bacterial self-protective colicin-like immunity family protein gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2115 M479_2116 M479_2116 M479_2116 2322126 2322329 - hypothetical protein conserved hypothetical protein gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2116 M479_2117 M479_2117 M479_2117 2322702 2322896 - cysteine-rich CPCC family protein gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2117 M479_2118 M479_2118 M479_2118 2322893 2324431 - hypothetical protein conserved hypothetical protein~[R] COG5529 Pyocin large subunit gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2118 M479_2119 M479_2119 M479_2119 2324938 2326080 - fic/DOC family protein [S] COG3177 Uncharacterized conserved protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2119 M479_212 M479_212 M479_212 217415 217672 - 2Fe-2S iron-sulfur cluster binding domain protein [C] COG0633 Ferredoxin gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=M479_212 M479_2120 M479_2120 M479_2120 2326349 2326714 + hypothetical protein conserved hypothetical protein gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2120 M479_2121 M479_2121 M479_2121 2326727 2326963 + hypothetical protein conserved hypothetical protein gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2121 M479_2122 M479_2122 M479_2122 2326969 2327301 + hypothetical protein conserved hypothetical protein gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2122 M479_2123 M479_2123 M479_2123 2327483 2327683 + prophage CP4-57 regulatory family protein [K] COG3311 Predicted transcriptional regulator gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2123 M479_2124 M479_2124 M479_2124 2327842 2328168 - hypothetical protein conserved hypothetical protein gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2124 M479_2125 M479_2125 M479_2125 2328468 2330759 + zinc-binding domain of primase-helicase family protein [S] COG4643 Uncharacterized protein conserved in bacteria gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2125 M479_2126 M479_2126 mqsA mqsA 2331159 2331554 - antitoxin MqsA [K] COG1396 Predicted transcriptional regulators gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2126 M479_2127 M479_2127 mqsR mqsR 2331557 2331853 - mRNA interferase MqsR gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2127 M479_2128 M479_2128 M479_2128 2332017 2332379 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2128 M479_2129 M479_2129 M479_2129 2332442 2332702 - plasmid stabilization system family protein [JD] COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2129 M479_213 M479_213 M479_213 217676 218806 - ribonucleotide reductase%2C small chain family protein [F] COG0208 Ribonucleotide reductase%2C beta subunit gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=M479_213 M479_2130 M479_2130 M479_2130 2333300 2333485 + hypothetical protein conserved hypothetical protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2130 M479_2131 M479_2131 M479_2131 2333567 2334781 - hypothetical protein phage integrase%2C N-terminal SAM-like domain protein~[L] COG0582 Integrase gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2131 M479_2132 M479_2132 M479_2132 2334947 2335020 - tRNA-Gly tRNA gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2132 M479_2133 M479_2133 lysS lysS 2335214 2336731 - lysine--tRNA ligase lysS_bact: lysine--tRNA ligase~[J] COG1190 Lysyl-tRNA synthetase (class II) gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2133 M479_2134 M479_2134 prfB prfB 2336741 2337673 - peptide chain release factor 2 prfB: peptide chain release factor 2~[J] COG1186 Protein chain release factor B gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2134 M479_2135 M479_2135 recJ recJ 2338018 2339751 - single-stranded-DNA-specific exonuclease RecJ recJ: single-stranded-DNA-specific exonuclease RecJ~[L] COG0608 Single-stranded DNA-specific exonuclease gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2135 M479_2136 M479_2136 M479_2136 2339758 2340474 - DSBA-like thioredoxin domain protein [O] COG1651 Protein-disulfide isomerase gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2136 M479_2137 M479_2137 xerD xerD 2340505 2341404 - tyrosine recombinase XerD recomb_XerD: tyrosine recombinase XerD~[L] COG4974 Site-specific recombinase XerD gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2137 M479_2138 M479_2138 M479_2138 2341511 2342029 + flavodoxin flav_long: flavodoxin~[C] COG0716 Flavodoxins gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2138 M479_2139 M479_2139 M479_2139 2342119 2343576 - inner membrane CreD family protein [V] COG4452 Inner membrane protein involved in colicin E2 resistance gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2139 M479_214 M479_214 M479_214 218969 221257 - ribonucleoside-diphosphate reductase%2C alpha subunit nrdE_NrdA: ribonucleoside-diphosphate reductase%2C alpha subunit~[F] COG0209 Ribonucleotide reductase%2C alpha subunit gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=M479_214 M479_2140 M479_2140 M479_2140 2343697 2345115 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2140 M479_2141 M479_2141 M479_2141 2345140 2345838 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2141 M479_2142 M479_2142 M479_2142 2346244 2346510 - flavinator of succinate dehydrogenase family protein [S] COG2938 Uncharacterized conserved protein gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2142 M479_2143 M479_2143 M479_2143 2346827 2347819 + aminomethyltransferase folate-binding domain protein [R] COG0354 Predicted aminomethyltransferase related to GcvT gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2143 M479_2144 M479_2144 M479_2144 2347892 2348389 - hypothetical protein conserved hypothetical protein~[S] COG5472 Predicted small integral membrane protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2144 M479_2145 M479_2145 M479_2145 2348647 2349348 - channel%2C hemolysin III family protein hlyIII: channel%2C hemolysin III family protein~[R] COG1272 Predicted membrane protein%2C hemolysin III homolog gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2145 M479_2146 M479_2146 M479_2146 2349550 2350653 - putative exported protein gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2146 M479_2147 M479_2147 M479_2147 2350757 2352733 - coiled stalk of trimeric autotransporter adhesin family protein [UW] COG5295 Autotransporter adhesin gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2147 M479_2148 M479_2148 M479_2148 2352730 2352882 - hemagglutinin repeat domain protein gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2148 M479_2149 M479_2149 M479_2149 2353942 2354379 - lipocalin-like domain protein gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2149 M479_215 M479_215 ubiG ubiG 221751 222479 - 3-demethylubiquinone-9 3-O-methyltransferase ubiG: 3-demethylubiquinone-9 3-O-methyltransferase~[H] COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1%2C4-benzoquinol methylase gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=M479_215 M479_2150 M479_2150 gcvP gcvP 2354757 2357636 - glycine dehydrogenase gcvP: glycine dehydrogenase~[E] COG1003 Glycine cleavage system protein P (pyridoxal-binding)%2C C-terminal domain gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2150 M479_2151 M479_2151 gcvH gcvH 2357848 2358234 - glycine cleavage system H protein gcvH: glycine cleavage system H protein~[E] COG0509 Glycine cleavage system H protein (lipoate-binding) gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2151 M479_2152 M479_2152 gcvT gcvT 2358303 2359400 - glycine cleavage system T protein gcvT: glycine cleavage system T protein~[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase) gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2152 M479_2153 M479_2153 M479_2153 2360121 2361341 - ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein ubi-OHases: ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2153 M479_2154 M479_2154 ubiH ubiH 2361514 2362692 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase ubiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2154 M479_2155 M479_2155 M479_2155 2362778 2364091 - hypothetical protein aminopeptidase P%2C N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2155 M479_2156 M479_2156 M479_2156 2364179 2364757 - yecA family protein ygfB_yecA: yecA family protein~[S] COG3079 Uncharacterized protein conserved in bacteria gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2156 M479_2157 M479_2157 zapA zapA 2365094 2365423 + cell division protein ZapA [S] COG3027 Uncharacterized protein conserved in bacteria gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2157 M479_2158 M479_2158 M479_2158 2365787 2366383 + 5-formyltetrahydrofolate cyclo-ligase MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase~[H] COG0212 5-formyltetrahydrofolate cyclo-ligase gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2158 M479_2159 M479_2159 M479_2159 2366512 2366970 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2159 M479_216 M479_216 gyrA gyrA 222741 225416 + DNA gyrase%2C A subunit gyrA: DNA gyrase%2C A subunit~[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=M479_216 M479_2160 M479_2160 M479_2160 2367359 2368600 - ACT domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2160 M479_2161 M479_2161 rpiA rpiA 2368907 2369563 - ribose 5-phosphate isomerase A rpiA: ribose 5-phosphate isomerase A~[G] COG0120 Ribose 5-phosphate isomerase gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2161 M479_2162 M479_2162 iciA iciA 2369905 2370813 + chromosome initiation inhibitor [K] COG0583 Transcriptional regulator gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2162 M479_2163 M479_2163 M479_2163 2370824 2371603 - hypothetical protein conserved hypothetical protein~[S] COG2968 Uncharacterized conserved protein gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2163 M479_2164 M479_2164 lysE lysE 2371793 2372410 - L-lysine exporter family protein 2a75: L-lysine exporter family protein~[R] COG1279 Lysine efflux permease gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2164 M479_2165 M479_2165 M479_2165 2372673 2373542 - mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2165 M479_2166 M479_2166 fbaA fbaA 2373980 2375059 - fructose-bisphosphate aldolase%2C class II fruBisAldo_II_A: fructose-bisphosphate aldolase%2C class II~[G] COG0191 Fructose/tagatose bisphosphate aldolase gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2166 M479_2167 M479_2167 M479_2167 2375179 2376342 - phosphoglycerate kinase family protein [G] COG0126 3-phosphoglycerate kinase gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2167 M479_2168 M479_2168 epd epd 2376445 2377461 - erythrose-4-phosphate dehydrogenase E4PD_g-proteo: erythrose-4-phosphate dehydrogenase~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2168 M479_2169 M479_2169 M479_2169 2377802 2378260 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2169 M479_217 M479_217 M479_217 225628 228477 + rcsC Alpha-Beta-Loop family protein [T] COG0642 Signal transduction histidine kinase gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=M479_217 M479_2170 M479_2170 tkt tkt 2378568 2380562 - transketolase tktlase_bact: transketolase~[G] COG0021 Transketolase gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2170 M479_2171 M479_2171 M479_2171 2381053 2381805 + peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2171 M479_2172 M479_2172 M479_2172 2382095 2382415 - rieske [2Fe-2S] domain protein [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2172 M479_2173 M479_2173 speA speA 2382575 2384554 - arginine decarboxylase speA: arginine decarboxylase~[E] COG1166 Arginine decarboxylase (spermidine biosynthesis) gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2173 M479_2174 M479_2174 M479_2174 2384800 2384961 - hypothetical protein conserved hypothetical protein gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2174 M479_2175 M479_2175 metK metK 2385761 2386915 + methionine adenosyltransferase metK: methionine adenosyltransferase~[H] COG0192 S-adenosylmethionine synthetase gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2175 M479_2176 M479_2176 M479_2176 2387108 2387620 + peptidase MA superfamily protein [S] COG3091 Uncharacterized protein conserved in bacteria gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2176 M479_2177 M479_2177 M479_2177 2387718 2388425 + endonuclease I family protein [L] COG2356 Endonuclease I gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2177 M479_2178 M479_2178 rsmE rsmE 2388677 2389408 + ribosomal RNA small subunit methyltransferase E [S] COG1385 Uncharacterized protein conserved in bacteria gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2178 M479_2179 M479_2179 gshB gshB 2389434 2390393 + glutathione synthase glut_syn: glutathione synthase~[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2179 M479_218 M479_218 rcsB rcsB 228545 229198 - rcsB protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=M479_218 M479_2180 M479_2180 M479_2180 2390509 2391072 + hypothetical protein conserved hypothetical protein~[K] COG1678 Putative transcriptional regulator gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2180 M479_2181 M479_2181 M479_2181 2391072 2391494 + hypothetical protein conserved hypothetical protein~[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2181 M479_2182 M479_2182 aguB aguB 2391674 2392558 + N-carbamoylputrescine amidase agmatine_aguB: N-carbamoylputrescine amidase~[R] COG0388 Predicted amidohydrolase gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2182 M479_2183 M479_2183 aguA aguA 2392562 2393677 + agmatine deiminase agmatine_aguA: agmatine deiminase~[E] COG2957 Peptidylarginine deiminase and related enzymes gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2183 M479_2184 M479_2184 M479_2184 2393786 2394910 - twitching motility family protein pilT_fam: twitching motility family protein~[NU] COG2805 Tfp pilus assembly protein%2C pilus retraction ATPase PilT gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2184 M479_2185 M479_2185 M479_2185 2394930 2395628 + hypothetical protein alanine racemase%2C N-terminal domain protein~[R] COG0325 Predicted enzyme with a TIM-barrel fold gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2185 M479_2186 M479_2186 proC proC 2395761 2396582 + pyrroline-5-carboxylate reductase proC: pyrroline-5-carboxylate reductase~[E] COG0345 Pyrroline-5-carboxylate reductase gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2186 M479_2187 M479_2187 M479_2187 2396870 2397424 + YGGT family protein [S] COG0762 Predicted integral membrane protein gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2187 M479_2188 M479_2188 M479_2188 2397421 2397711 + hypothetical protein conserved hypothetical protein~[S] COG1872 Uncharacterized conserved protein gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2188 M479_2189 M479_2189 rdgB rdgB 2397811 2398404 + non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family [F] COG0127 Xanthosine triphosphate pyrophosphatase gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2189 M479_219 M479_219 M479_219 229201 229773 - hpt domain protein [T] COG2198 FOG: HPt domain gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=M479_219 M479_2190 M479_2190 M479_2190 2398397 2399527 + radical SAM superfamily protein [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2190 M479_2191 M479_2191 M479_2191 2399717 2409049 - peptidase C80 family protein [Q] COG2931 RTX toxins and related Ca2+-binding proteins gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2191 M479_2192 M479_2192 M479_2192 2409545 2409775 - hypothetical protein conserved hypothetical protein gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2192 M479_2193 M479_2193 M479_2193 2409748 2410278 - hypothetical protein conserved hypothetical protein gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2193 M479_2194 M479_2194 glsA glsA 2410390 2411316 - glutaminase A gln_ase: glutaminase A~[E] COG2066 Glutaminase gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2194 M479_2195 M479_2195 M479_2195 2411427 2411753 - hypothetical protein conserved hypothetical protein~[S] COG3171 Uncharacterized protein conserved in bacteria gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2195 M479_2196 M479_2196 trmB trmB 2411753 2412472 - tRNA (guanine-N(7)-)-methyltransferase [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2196 M479_2197 M479_2197 mutY mutY 2412807 2413925 + A/G-specific adenine glycosylase mutY: A/G-specific adenine glycosylase~[L] COG1194 A/G-specific DNA glycosylase gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2197 M479_2198 M479_2198 M479_2198 2414103 2414375 + putative Fe(2+)-trafficking protein [CO] COG2924 Fe-S cluster protector protein gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2198 M479_2199 M479_2199 M479_2199 2414558 2415634 + hypothetical protein conserved hypothetical protein~[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2199 M479_22 M479_22 M479_22 29099 29293 + glycogen synthesis family protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=M479_22 M479_220 M479_220 M479_220 229941 231893 - histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein [T] COG0642 Signal transduction histidine kinase gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=M479_220 M479_2200 M479_2200 M479_2200 2415951 2417051 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2200 M479_2201 M479_2201 M479_2201 2417044 2419188 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2201 M479_2202 M479_2202 M479_2202 2419271 2420254 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2202 M479_2203 M479_2203 M479_2203 2420287 2421786 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2203 M479_2204 M479_2204 M479_2204 2421832 2422791 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2204 M479_2205 M479_2205 M479_2205 2423347 2425509 - beta-eliminating lyase family protein [E] COG1982 Arginine/lysine/ornithine decarboxylases gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2205 M479_2206 M479_2206 M479_2206 2426178 2426253 + tRNA-Phe tRNA gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2206 M479_2207 M479_2207 M479_2207 2426506 2426814 - phage integrase family protein [L] COG0582 Integrase gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2207 M479_2208 M479_2208 M479_2208 2426838 2427473 - hypothetical protein conserved hypothetical protein~[S] COG4253 Uncharacterized protein conserved in bacteria gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2208 M479_2209 M479_2209 M479_2209 2428081 2428449 - putative transposase [L] COG1662 Transposase and inactivated derivatives%2C IS1 family gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2209 M479_221 M479_221 M479_221 231917 232303 - putative membrane protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=M479_221 M479_2210 M479_2210 M479_2210 2428503 2428778 - hypothetical protein insA N-terminal domain protein~[L] COG3677 Transposase and inactivated derivatives gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2210 M479_2211 M479_2211 M479_2211 2428874 2429641 - hypothetical protein conserved hypothetical protein gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2211 M479_2212 M479_2212 M479_2212 2429628 2431925 - peptidase M23 family protein gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2212 M479_2213 M479_2213 M479_2213 2431941 2434289 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2213 M479_2214 M479_2214 clpV clpV 2434286 2436934 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2214 M479_2215 M479_2215 M479_2215 2437352 2437843 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2215 M479_2216 M479_2216 M479_2216 2437847 2439583 - ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2216 M479_2217 M479_2217 M479_2217 2439583 2440269 - type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2217 M479_2218 M479_2218 M479_2218 2440266 2441618 - hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2218 M479_2219 M479_2219 M479_2219 2441630 2443174 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2219 M479_222 M479_222 M479_222 232300 233070 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=M479_222 M479_2220 M479_2220 M479_2220 2443223 2443723 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2220 M479_2221 M479_2221 M479_2221 2444925 2445080 - hypothetical protein conserved hypothetical protein gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2221 M479_2222 M479_2222 M479_2222 2445123 2445494 - putative membrane protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2222 M479_2223 M479_2223 M479_2223 2445668 2445931 - hypothetical protein insA N-terminal domain protein~[L] COG3677 Transposase and inactivated derivatives gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2223 M479_2224 M479_2224 M479_2224 2445999 2446325 - putative lipoprotein gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2224 M479_2225 M479_2225 M479_2225 2446845 2447495 - CAAX protease self-immunity family protein [R] COG1266 Predicted metal-dependent membrane protease gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2225 M479_2226 M479_2226 M479_2226 2448201 2448347 - hypothetical protein conserved hypothetical protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2226 M479_2227 M479_2227 M479_2227 2449302 2450045 - bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2227 M479_2228 M479_2228 esaI esaI 2448671 2449321 + acyl-homoserine-lactone synthase [TQ] COG3916 N-acyl-L-homoserine lactone synthetase gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2228 M479_2229 M479_2229 M479_2229 2450607 2451965 + prolyl oligopeptidase family protein [R] COG4099 Predicted peptidase gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2229 M479_223 M479_223 M479_223 233843 233977 + putative membrane protein gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=M479_223 M479_2230 M479_2230 M479_2230 2452342 2453175 + dioxygenase family protein [Q] COG3485 Protocatechuate 3%2C4-dioxygenase beta subunit gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2230 M479_2231 M479_2231 M479_2231 2453465 2454688 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2231 M479_2232 M479_2232 M479_2232 2454828 2455436 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2232 M479_2233 M479_2233 M479_2233 2455529 2456599 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2233 M479_2234 M479_2234 M479_2234 2456583 2457533 + acetyltransferase domain protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2234 M479_2235 M479_2235 M479_2235 2457530 2459278 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2235 M479_2236 M479_2236 M479_2236 2459275 2460603 + flavin-binding monooxygenase-like family protein [Q] COG3486 Lysine/ornithine N-monooxygenase gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2236 M479_2237 M479_2237 M479_2237 2460675 2462855 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2237 M479_2238 M479_2238 gph gph 2463114 2464538 - phosphoglycolate phosphatase%2C bacterial gph: sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein~[G] COG2211 Na+/melibiose symporter and related transporters gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2238 M479_2239 M479_2239 M479_2239 2464786 2465571 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2239 M479_224 M479_224 ompC ompC 234173 235288 + outer membrane protein C [M] COG3203 Outer membrane protein (porin) gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=M479_224 M479_2240 M479_2240 M479_2240 2465625 2466140 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2240 M479_2241 M479_2241 M479_2241 2467215 2467682 + glycine zipper 2TM domain protein [M] COG3133 Outer membrane lipoprotein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2241 M479_2242 M479_2242 M479_2242 2467821 2468192 - hypothetical protein conserved hypothetical protein gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2242 M479_2243 M479_2243 M479_2243 2468176 2468628 - putative membrane protein gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2243 M479_2244 M479_2244 M479_2244 2468779 2469225 - hypothetical protein conserved hypothetical protein gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2244 M479_2245 M479_2245 M479_2245 2469685 2470596 - membrane MotB of proton-channel complex MotA/MotB family protein [N] COG1360 Flagellar motor protein gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2245 M479_2246 M479_2246 motA motA 2470596 2471462 - flagellar motor stator protein MotA motA1: flagellar motor stator protein MotA~[N] COG1291 Flagellar motor component gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2246 M479_2247 M479_2247 M479_2247 2471478 2472173 - RNA polymerase sigma factor%2C FliA/WhiG family protein fliA_WhiG: RNA polymerase sigma factor%2C FliA/WhiG family protein~[K] COG1191 DNA-directed RNA polymerase specialized sigma subunit gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2247 M479_2248 M479_2248 M479_2248 2472179 2472649 - flagellar basal body-associated FliL family protein gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2248 M479_2249 M479_2249 M479_2249 2472688 2473809 - flagellar hook-length control FliK family protein [N] COG3144 Flagellar hook-length control protein gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2249 M479_225 M479_225 M479_225 235672 235759 + tRNA-Ser tRNA gene224 http://www.ncbi.nlm.nih.gov/gene/?term=M479_225 M479_2250 M479_2250 M479_2250 2473811 2474137 - putative flagellar protein lafD gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2250 M479_2251 M479_2251 fliS fliS 2474139 2474519 - flagellar protein FliS fliS: flagellar protein FliS~[NUO] COG1516 Flagellin-specific chaperone FliS gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2251 M479_2252 M479_2252 M479_2252 2474529 2475806 - flagellar hook-associated family protein [N] COG1345 Flagellar capping protein gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2252 M479_2253 M479_2253 M479_2253 2476026 2477231 - hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2253 M479_2254 M479_2254 M479_2254 2477514 2478713 - hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2254 M479_2255 M479_2255 M479_2255 2479226 2480422 - hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2255 M479_2256 M479_2256 M479_2256 2480981 2482186 - hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2256 M479_2257 M479_2257 M479_2257 2482811 2483857 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2257 M479_2258 M479_2258 M479_2258 2483838 2484284 + hypothetical protein conserved hypothetical protein gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2258 M479_2259 M479_2259 M479_2259 2484448 2485461 - putative flagellar hook associated protein lafW gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2259 M479_226 M479_226 M479_226 235765 235840 + tRNA-Thr tRNA gene225 http://www.ncbi.nlm.nih.gov/gene/?term=M479_226 M479_2260 M479_2260 flgL flgL 2485473 2486396 - flagellar hook-associated protein 3 flagell_flgL: flagellar hook-associated protein 3~[N] COG1344 Flagellin and related hook-associated proteins gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2260 M479_2261 M479_2261 flgK flgK 2486425 2487786 - flagellar hook-associated protein FlgK flgK_ends: flagellar hook-associated protein FlgK~[N] COG1256 Flagellar hook-associated protein gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2261 M479_2262 M479_2262 M479_2262 2487899 2488192 - rod binding family protein [MNO] COG3951 Rod binding protein gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2262 M479_2263 M479_2263 M479_2263 2488202 2489260 - flagellar P-ring family protein [N] COG1706 Flagellar basal-body P-ring protein gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2263 M479_2264 M479_2264 M479_2264 2489391 2490029 - flagellar L-ring family protein [N] COG2063 Flagellar basal body L-ring protein gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2264 M479_2265 M479_2265 flgG flgG 2490091 2490876 - flagellar basal-body rod protein FlgG flgG_G_neg: flagellar basal-body rod protein FlgG~[N] COG4786 Flagellar basal body rod protein gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2265 M479_2266 M479_2266 flgF flgF 2490944 2491675 - flagellar basal-body rod protein FlgF flgF: flagellar basal-body rod protein FlgF~[N] COG4787 Flagellar basal body rod protein gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2266 M479_2267 M479_2267 M479_2267 2491675 2492916 - flagellar hook-basal body family protein flgEFG_subfam: flagellar hook-basal body family protein~[N] COG1749 Flagellar hook protein FlgE gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2267 M479_2268 M479_2268 M479_2268 2492971 2493627 - hypothetical protein flagellar hook capping - N-terminal region family protein~[N] COG1843 Flagellar hook capping protein gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2268 M479_2269 M479_2269 flgC flgC 2493630 2494055 - flagellar basal-body rod protein FlgC flgC: flagellar basal-body rod protein FlgC~[N] COG1558 Flagellar basal body rod protein gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2269 M479_227 M479_227 M479_227 236028 237194 - putative enzyme [V] COG1680 Beta-lactamase class C and other penicillin binding proteins gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=M479_227 M479_2270 M479_2270 flgB flgB 2494058 2494504 - flagellar basal-body rod protein FlgB flgB: flagellar basal-body rod protein FlgB~[N] COG1815 Flagellar basal body protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2270 M479_2271 M479_2271 flgA flgA 2494523 2495410 + flagella basal body P-ring formation protein FlgA flgA_cterm: flagella basal body P-ring formation protein FlgA~[NO] COG1261 Flagellar basal body P-ring biosynthesis protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2271 M479_2272 M479_2272 flgM flgM 2495639 2495905 + flagellar biosynthesis anti-sigma factor FlgM flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2272 M479_2273 M479_2273 M479_2273 2495912 2496337 + flgN family protein gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2273 M479_2274 M479_2274 fliJ fliJ 2496665 2497102 - flagellar export protein FliJ flagell_FliJ: flagellar export protein FliJ gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2274 M479_2275 M479_2275 M479_2275 2497106 2498446 - ATPase%2C FliI/YscN family protein fliI_yscN: ATPase%2C FliI/YscN family protein~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2275 M479_2276 M479_2276 M479_2276 2498439 2499155 - hypothetical protein essential Yae1%2C N terminal family protein~[NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2276 M479_2277 M479_2277 M479_2277 2499160 2500203 - fliG middle domain protein [N] COG1536 Flagellar motor switch protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2277 M479_2278 M479_2278 fliF fliF 2500175 2501815 - flagellar M-ring protein FliF fliF: flagellar M-ring protein FliF~[NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2278 M479_2279 M479_2279 fliE fliE 2501825 2502205 - flagellar hook-basal body complex protein FliE fliE: flagellar hook-basal body complex protein FliE~[NU] COG1677 Flagellar hook-basal body protein gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2279 M479_228 M479_228 M479_228 237469 238995 - MFS/sugar transport family protein [G] COG2211 Na+/melibiose symporter and related transporters gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=M479_228 M479_2280 M479_2280 M479_2280 2502222 2503247 - AAA domain family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2280 M479_2281 M479_2281 M479_2281 2503765 2504664 + surface presentation of antigens family protein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2281 M479_2282 M479_2282 fliN fliN 2504657 2505070 + flagellar motor switch protein FliN fliN: flagellar motor switch protein FliN~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2282 M479_2283 M479_2283 fliP fliP 2505067 2505837 + flagellar biosynthetic protein FliP fliP: flagellar biosynthetic protein FliP~[NU] COG1338 Flagellar biosynthesis pathway%2C component FliP gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2283 M479_2284 M479_2284 fliQ fliQ 2505839 2506111 + flagellar biosynthetic protein FliQ fliQ: flagellar biosynthetic protein FliQ~[NU] COG1987 Flagellar biosynthesis pathway%2C component FliQ gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2284 M479_2285 M479_2285 fliR fliR 2506118 2506891 + flagellar biosynthetic protein FliR fliR: flagellar biosynthetic protein FliR~[NU] COG1684 Flagellar biosynthesis pathway%2C component FliR gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2285 M479_2286 M479_2286 flhB flhB 2506891 2508024 + flagellar biosynthetic protein FlhB flhB: flagellar biosynthetic protein FlhB~[NU] COG1377 Flagellar biosynthesis pathway%2C component FlhB gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2286 M479_2287 M479_2287 M479_2287 2508011 2510107 + FHIPEP family protein [NU] COG1298 Flagellar biosynthesis pathway%2C component FlhA gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2287 M479_2288 M479_2288 M479_2288 2510310 2510879 + hypothetical protein conserved hypothetical protein gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2288 M479_2289 M479_2289 M479_2289 2510971 2511966 - hypothetical protein conserved hypothetical protein~[S] COG4461 Uncharacterized protein conserved in bacteria%2C putative lipoprotein gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2289 M479_229 M479_229 M479_229 239411 240400 + beta-lactamase superfamily domain protein [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=M479_229 M479_2290 M479_2290 M479_2290 2512822 2513901 + periplasmic binding family protein [P] COG4592 ABC-type Fe2+-enterobactin transport system%2C periplasmic component gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2290 M479_2291 M479_2291 M479_2291 2514113 2514874 - fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2291 M479_2292 M479_2292 M479_2292 2514877 2515218 - putative membrane protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2292 M479_2293 M479_2293 papD papD 2515243 2515962 - chaperone protein papD [NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2293 M479_2294 M479_2294 M479_2294 2515980 2518460 - hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2294 M479_2295 M479_2295 M479_2295 2518813 2519271 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2295 M479_2296 M479_2296 M479_2296 2519471 2519893 + type IV leader peptidase family protein [OU] COG4960 Flp pilus assembly protein%2C protease CpaA gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2296 M479_2297 M479_2297 M479_2297 2519945 2520811 + putative membrane protein gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2297 M479_2298 M479_2298 M479_2298 2520808 2521662 + bacterial type II and III secretion system family protein [U] COG4964 Flp pilus assembly protein%2C secretin CpaC gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2298 M479_2299 M479_2299 M479_2299 2521704 2522126 + bacterial type II and III secretion system family protein [U] COG4964 Flp pilus assembly protein%2C secretin CpaC gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2299 M479_23 M479_23 M479_23 29311 29493 - hypothetical protein conserved hypothetical protein gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=M479_23 M479_230 M479_230 M479_230 240474 242261 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=M479_230 M479_2300 M479_2300 M479_2300 2522123 2522413 + hypothetical protein conserved hypothetical protein gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2300 M479_2301 M479_2301 M479_2301 2522424 2523551 + hypothetical protein conserved hypothetical protein~[U] COG4963 Flp pilus assembly protein%2C ATPase CpaE gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2301 M479_2302 M479_2302 M479_2302 2523563 2524849 + ATP synthase alpha/beta family%2C nucleotide-binding domain protein [U] COG4962 Flp pilus assembly protein%2C ATPase CpaF gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2302 M479_2303 M479_2303 M479_2303 2524846 2525721 + type II secretion system (T2SS)%2C F family protein [U] COG4965 Flp pilus assembly protein TadB gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2303 M479_2304 M479_2304 M479_2304 2525718 2526551 + type II secretion system (T2SS)%2C F family protein [NU] COG2064 Flp pilus assembly protein TadC gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2304 M479_2305 M479_2305 M479_2305 2526535 2527305 + TPR repeat family protein [U] COG5010 Flp pilus assembly protein TadD%2C contains TPR repeats gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2305 M479_2306 M479_2306 M479_2306 2527302 2527775 + tadE-like family protein gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2306 M479_2307 M479_2307 M479_2307 2527759 2528331 + putative tight adherance operon protein gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2307 M479_2308 M479_2308 M479_2308 2528370 2529911 + von Willebrand factor type A domain protein [U] COG4961 Flp pilus assembly protein TadG gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2308 M479_2309 M479_2309 exbD exbD 2530008 2530439 - TonB system transport protein ExbD exbD_1: TonB system transport protein ExbD~[U] COG0848 Biopolymer transport protein gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2309 M479_231 M479_231 pla pla 242758 243693 - coagulase/fibrinolysin [M] COG4571 Outer membrane protease gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=M479_231 M479_2310 M479_2310 M479_2310 2529877 2530062 + hypothetical protein conserved hypothetical protein gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2310 M479_2311 M479_2311 exbB exbB 2530443 2531480 - tonB-system energizer ExbB exbB: tonB-system energizer ExbB~[U] COG0811 Biopolymer transport proteins gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2311 M479_2312 M479_2312 metC metC 2531959 2533170 + cystathionine beta-lyase cysta_beta_ly_B: cystathionine beta-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2312 M479_2313 M479_2313 M479_2313 2533363 2534025 + hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2313 M479_2314 M479_2314 M479_2314 2534117 2535010 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2314 M479_2315 M479_2315 yqhD yqhD 2535408 2536565 + alcohol dehydrogenase YqhD [C] COG1979 Uncharacterized oxidoreductases%2C Fe-dependent alcohol dehydrogenase family gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2315 M479_2316 M479_2316 M479_2316 2536984 2537817 + aldo/keto reductase family protein [R] COG0656 Aldo/keto reductases%2C related to diketogulonate reductase gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2316 M479_2317 M479_2317 M479_2317 2537839 2538651 - hypothetical protein conserved hypothetical protein~[C] COG1032 Fe-S oxidoreductase gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2317 M479_2318 M479_2318 M479_2318 2538636 2540183 - radical SAM superfamily protein [C] COG1032 Fe-S oxidoreductase gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2318 M479_2319 M479_2319 M479_2319 2540491 2541915 - multicopper oxidase family protein [Q] COG2132 Putative multicopper oxidases gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2319 M479_232 M479_232 M479_232 242565 242786 + hypothetical protein conserved hypothetical protein gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=M479_232 M479_2320 M479_2320 M479_2320 2542094 2542825 - 1-acylglycerol-3-phosphate O-acyltransferases domain protein AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases domain protein~[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2320 M479_2321 M479_2321 parC parC 2543114 2545387 - DNA topoisomerase IV%2C A subunit parC_Gneg: DNA topoisomerase IV%2C A subunit~[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2321 M479_2322 M479_2322 M479_2322 2545691 2546275 + flavodoxin-like fold family protein [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2322 M479_2323 M479_2323 M479_2323 2546333 2547244 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2323 M479_2324 M479_2324 parE parE 2547248 2549143 - DNA topoisomerase IV%2C B subunit parE_Gneg: DNA topoisomerase IV%2C B subunit~[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C B subunit gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2324 M479_2325 M479_2325 M479_2325 2549245 2549826 - hypothetical protein conserved hypothetical protein~[R] COG3150 Predicted esterase gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2325 M479_2326 M479_2326 M479_2326 2549826 2550653 - calcineurin-like phosphoesterase family protein [R] COG1409 Predicted phosphohydrolases gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2326 M479_2327 M479_2327 M479_2327 2550734 2551159 - hypothetical protein conserved hypothetical protein~[S] COG3151 Uncharacterized protein conserved in bacteria gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2327 M479_2328 M479_2328 M479_2328 2551193 2551825 - nudix-type nucleoside diphosphatase%2C YffH/AdpP family protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2328 M479_2329 M479_2329 M479_2329 2552221 2553618 + type I secretion outer membrane%2C TolC family protein type_I_sec_TolC: type I secretion outer membrane%2C TolC family protein~[MU] COG1538 Outer membrane protein gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2329 M479_233 M479_233 M479_233 243865 244107 - dinI-like family protein gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=M479_233 M479_2330 M479_2330 M479_2330 2553683 2553853 - hypothetical protein conserved hypothetical protein gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2330 M479_2331 M479_2331 M479_2331 2553922 2554605 + hypothetical protein conserved hypothetical protein~[S] COG5463 Predicted integral membrane protein gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2331 M479_2332 M479_2332 M479_2332 2554615 2555775 + glutathionylspermidine synthase preATP-grasp family protein [E] COG0754 Glutathionylspermidine synthase gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2332 M479_2333 M479_2333 M479_2333 2555936 2556718 - catalytic LigB subunit of aromatic ring-opening dioxygenase family protein [S] COG3384 Uncharacterized conserved protein gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2333 M479_2334 M479_2334 ribB ribB 2557160 2557813 - 3%2C4-dihydroxy-2-butanone-4-phosphate synthase ribB: 3%2C4-dihydroxy-2-butanone-4-phosphate synthase~[H] COG0108 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2334 M479_2335 M479_2335 M479_2335 2558002 2558346 + hypothetical protein gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2335 M479_2336 M479_2336 M479_2336 2558382 2558663 + membrane fusogenic activity family protein [S] COG2960 Uncharacterized protein conserved in bacteria gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2336 M479_2337 M479_2337 M479_2337 2558988 2560238 - amino acid permease family protein [E] COG0531 Amino acid transporters gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2337 M479_2338 M479_2338 rfaE1 rfaE1 2560275 2561705 - bifunctional protein RfaE%2C domain I rfaE_dom_I: bifunctional protein RfaE%2C domain I~[M] COG2870 ADP-heptose synthase%2C bifunctional sugar kinase/adenylyltransferase gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2338 M479_2339 M479_2339 M479_2339 2561840 2564695 - glutamate-ammonia ligase adenylyltransferase family protein [OT] COG1391 Glutamine synthetase adenylyltransferase gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2339 M479_234 M479_234 ci ci 244313 245035 - repressor protein CI [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=M479_234 M479_2340 M479_2340 M479_2340 2564866 2566173 - CYTH domain protein [S] COG3025 Uncharacterized conserved protein gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2340 M479_2341 M479_2341 M479_2341 2566477 2567100 + bacterial SH3 domain protein [T] COG3103 SH3 domain protein gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2341 M479_2342 M479_2342 M479_2342 2567260 2568498 + poly A polymerase head domain protein [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2342 M479_2343 M479_2343 uppP uppP 2568734 2569552 - undecaprenyl-diphosphatase UppP undec_PP_bacA: undecaprenyl-diphosphatase UppP~[V] COG1968 Uncharacterized bacitracin resistance protein gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2343 M479_2344 M479_2344 folB folB 2569826 2570185 - dihydroneopterin aldolase folB: dihydroneopterin aldolase~[H] COG1539 Dihydroneopterin aldolase gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2344 M479_2345 M479_2345 plsY plsY 2570293 2570943 + acyl-phosphate glycerol 3-phosphate acyltransferase [S] COG0344 Predicted membrane protein gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2345 M479_2346 M479_2346 tsaD tsaD 2571060 2572073 - tRNA threonylcarbamoyl adenosine modification protein TsaD T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD~[O] COG0533 Metal-dependent proteases with possible chaperone activity gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2346 M479_2347 M479_2347 rpsU rpsU 2572479 2572694 + ribosomal protein S21 S21p: ribosomal protein S21~[J] COG0828 Ribosomal protein S21 gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2347 M479_2348 M479_2348 dnaG dnaG 2572830 2574578 + DNA primase dnaG: DNA primase~[L] COG0358 DNA primase (bacterial type) gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2348 M479_2349 M479_2349 rpoD rpoD 2574736 2576562 + RNA polymerase sigma factor RpoD rpoD_Cterm: RNA polymerase sigma factor RpoD~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2349 M479_235 M479_235 M479_235 245363 245788 + phage antitermination Q family protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=M479_235 M479_2350 M479_2350 M479_2350 2576758 2576834 + tRNA-Met tRNA gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2350 M479_2351 M479_2351 M479_2351 2577080 2577418 - hypothetical protein conserved hypothetical protein gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2351 M479_2352 M479_2352 M479_2352 2577396 2577686 - terminase small subunit [L] COG3728 Phage terminase%2C small subunit gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2352 M479_2353 M479_2353 M479_2353 2577703 2578158 - hypothetical protein conserved hypothetical protein gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2353 M479_2354 M479_2354 M479_2354 2578185 2578655 - hypothetical protein conserved hypothetical protein gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2354 M479_2355 M479_2355 M479_2355 2578664 2580046 - putative hNH endonuclease gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2355 M479_2356 M479_2356 M479_2356 2580179 2580409 - hypothetical protein conserved hypothetical protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2356 M479_2357 M479_2357 M479_2357 2581120 2581431 - fic/DOC family protein [S] COG3177 Uncharacterized conserved protein gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2357 M479_2358 M479_2358 M479_2358 2580965 2581123 + hypothetical protein conserved hypothetical protein gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2358 M479_2359 M479_2359 M479_2359 2581428 2581691 - putative fIC domain-containing protein gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2359 M479_236 M479_236 M479_236 245999 247303 + hypothetical protein conserved hypothetical protein~[S] COG3395 Uncharacterized protein conserved in bacteria gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=M479_236 M479_2360 M479_2360 M479_2360 2582038 2583060 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2360 M479_2361 M479_2361 M479_2361 2583060 2583839 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2361 M479_2362 M479_2362 M479_2362 2584041 2584973 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2362 M479_2363 M479_2363 M479_2363 2585135 2585851 + thioredoxin family protein [O] COG3531 Predicted protein-disulfide isomerase gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2363 M479_2364 M479_2364 M479_2364 2586111 2586413 + mono-oxygenase ydhR family protein gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2364 M479_2365 M479_2365 M479_2365 2586628 2587032 - endoribonuclease L-PSP family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2365 M479_2366 M479_2366 M479_2366 2587317 2587697 - endoribonuclease L-PSP [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2366 M479_2367 M479_2367 M479_2367 2587713 2588339 - HTH domain protein [S] COG2964 Uncharacterized protein conserved in bacteria gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2367 M479_2368 M479_2368 M479_2368 2588473 2588910 - polyketide cyclase / dehydrase and lipid transport family protein gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2368 M479_2369 M479_2369 M479_2369 2588923 2590374 - na+/H+ antiporter family protein [C] COG1757 Na+/H+ antiporter gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2369 M479_237 M479_237 M479_237 247300 248031 + hypothetical protein class II Aldolase and Adducin N-terminal domain protein~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=M479_237 M479_2370 M479_2370 M479_2370 2590367 2591599 - beta-eliminating lyase family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2370 M479_2371 M479_2371 M479_2371 2592365 2592565 + hypothetical protein conserved hypothetical protein gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2371 M479_2372 M479_2372 M479_2372 2592562 2592897 + putative membrane protein gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2372 M479_2373 M479_2373 M479_2373 2592907 2593956 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[V] COG1566 Multidrug resistance efflux pump gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2373 M479_2374 M479_2374 M479_2374 2593940 2595841 + fusaric acid resistance family protein [S] COG1289 Predicted membrane protein gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2374 M479_2375 M479_2375 M479_2375 2595846 2597372 + outer membrane efflux family protein [MU] COG1538 Outer membrane protein gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2375 M479_2376 M479_2376 M479_2376 2597436 2599619 - hypothetical protein glycosyl hydrolase family 3 C-terminal domain protein~[G] COG1472 Beta-glucosidase-related glycosidases gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2376 M479_2377 M479_2377 M479_2377 2599670 2600182 - putative exported protein gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2377 M479_2378 M479_2378 M479_2378 2600182 2601000 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2378 M479_2379 M479_2379 M479_2379 2601000 2601881 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2379 M479_238 M479_238 M479_238 248037 248846 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=M479_238 M479_2380 M479_2380 M479_2380 2601935 2603179 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2380 M479_2381 M479_2381 M479_2381 2603256 2604242 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2381 M479_2382 M479_2382 M479_2382 2604351 2607704 - hypothetical protein conserved hypothetical protein~[G] COG3459 Cellobiose phosphorylase gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2382 M479_2383 M479_2383 M479_2383 2607787 2608902 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2383 M479_2384 M479_2384 M479_2384 2609228 2610607 + glucoamylase family protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2384 M479_2385 M479_2385 M479_2385 2610709 2611704 + metA-pathway of phenol degradation family protein gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2385 M479_2386 M479_2386 M479_2386 2611764 2614049 + autotransporter beta-domain protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2386 M479_2387 M479_2387 M479_2387 2614545 2615300 - putative adhesin/hemolysin [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2387 M479_2388 M479_2388 M479_2388 2615333 2615749 - immunity 38 family protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2388 M479_2389 M479_2389 M479_2389 2615845 2616072 - hypothetical protein conserved hypothetical protein gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2389 M479_239 M479_239 M479_239 248822 249616 + xylose isomerase-like TIM barrel family protein [G] COG3622 Hydroxypyruvate isomerase gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=M479_239 M479_2390 M479_2390 M479_2390 2616338 2616571 - putative membrane protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2390 M479_2391 M479_2391 M479_2391 2616568 2626455 - hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2391 M479_2392 M479_2392 M479_2392 2626500 2628188 - surface antigen family protein [U] COG2831 Hemolysin activation/secretion protein gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2392 M479_2393 M479_2393 M479_2393 2628903 2629541 + von Willebrand factor type A domain protein [R] COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2393 M479_2394 M479_2394 M479_2394 2629574 2630215 + terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2394 M479_2395 M479_2395 M479_2395 2630217 2630855 + von Willebrand factor type A domain protein [R] COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2395 M479_2396 M479_2396 M479_2396 2630957 2631997 + von Willebrand factor type A domain protein [R] COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2396 M479_2397 M479_2397 M479_2397 2631997 2633730 + phosphatase 2C family protein gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2397 M479_2398 M479_2398 M479_2398 2633762 2635261 + kinase domain protein [RTKL] COG0515 Serine/threonine protein kinase gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2398 M479_2399 M479_2399 hdeD hdeD 2635652 2636221 + protein hdeD [S] COG3247 Uncharacterized conserved protein gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2399 M479_24 M479_24 M479_24 29675 30640 - putative membrane protein [S] COG3274 Uncharacterized protein conserved in bacteria gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=M479_24 M479_240 M479_240 M479_240 250213 250503 + putative bacteriophage protein gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=M479_240 M479_2400 M479_2400 M479_2400 2636434 2638455 + flavin oxidoreductase / NADH oxidase family protein NADH:flavin oxidoreductase / NADH oxidase family protein~[C] COG1902 NADH:flavin oxidoreductases%2C Old Yellow Enzyme family gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2400 M479_2401 M479_2401 M479_2401 2638571 2639758 - methyltransferase small domain protein [J] COG2813 16S RNA G1207 methylase RsmC gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2401 M479_2402 M479_2402 M479_2402 2640227 2643082 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2402 M479_2403 M479_2403 M479_2403 2643321 2643830 + hypothetical protein conserved hypothetical protein~[R] COG1451 Predicted metal-dependent hydrolase gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2403 M479_2404 M479_2404 M479_2404 2644048 2645043 + oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2404 M479_2405 M479_2405 M479_2405 2645578 2646834 + dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[E] COG3633 Na+/serine symporter gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2405 M479_2406 M479_2406 M479_2406 2646785 2647045 + hypothetical protein conserved hypothetical protein gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2406 M479_2407 M479_2407 M479_2407 2647035 2647493 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2407 M479_2408 M479_2408 M479_2408 2647611 2648141 - bacterial inner membrane family protein gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2408 M479_2409 M479_2409 M479_2409 2648294 2649784 - hypothetical protein D-galactarate dehydratase / Altronate hydrolase%2C C terminus family protein~[G] COG2721 Altronate dehydratase gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2409 M479_241 M479_241 M479_241 250549 251166 + putative bacteriophage ATP-binding protein gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=M479_241 M479_2410 M479_2410 M479_2410 2649795 2651246 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2410 M479_2411 M479_2411 M479_2411 2651445 2652854 - glucuronate isomerase family protein [G] COG1904 Glucuronate isomerase gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2411 M479_2412 M479_2412 M479_2412 2653602 2654348 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2412 M479_2413 M479_2413 M479_2413 2654400 2654903 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2413 M479_2414 M479_2414 M479_2414 2655166 2655960 + bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2414 M479_2415 M479_2415 M479_2415 2656209 2656742 + putative lipoprotein gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2415 M479_2416 M479_2416 yqjA yqjA 2657020 2657718 + inner membrane protein YqjA [S] COG0586 Uncharacterized membrane-associated protein gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2416 M479_2417 M479_2417 M479_2417 2657715 2658104 + hypothetical protein secD export N-terminal TM region family protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2417 M479_2418 M479_2418 M479_2418 2658330 2658710 + hypothetical protein conserved hypothetical protein gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2418 M479_2419 M479_2419 M479_2419 2658865 2659170 + hypothetical protein conserved hypothetical protein~[S] COG4575 Uncharacterized conserved protein gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2419 M479_242 M479_242 M479_242 251171 251365 + hypothetical protein conserved hypothetical protein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=M479_242 M479_2420 M479_2420 M479_2420 2659173 2659568 + hypothetical protein conserved hypothetical protein~[S] COG5393 Predicted membrane protein gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2420 M479_2421 M479_2421 M479_2421 2659565 2659849 + yqjK-like family protein gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2421 M479_2422 M479_2422 M479_2422 2660153 2660548 + SURF4 family protein [S] COG2259 Predicted membrane protein gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2422 M479_2423 M479_2423 M479_2423 2660634 2661620 + hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0435 Predicted glutathione S-transferase gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2423 M479_2424 M479_2424 M479_2424 2661751 2662644 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2424 M479_2425 M479_2425 M479_2425 2662906 2663610 + pirin family protein [R] COG1741 Pirin-related protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2425 M479_2426 M479_2426 rsmI rsmI 2664434 2665333 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [R] COG0313 Predicted methyltransferases gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2426 M479_2427 M479_2427 M479_2427 2665396 2667369 + lppC lipofamily protein [R] COG3107 Putative lipoprotein gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2427 M479_2428 M479_2428 M479_2428 2667453 2667806 + hypothetical protein conserved hypothetical protein~[L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2428 M479_2429 M479_2429 M479_2429 2668077 2668667 + SIS domain protein [G] COG0279 Phosphoheptose isomerase gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2429 M479_243 M479_243 M479_243 251362 252870 + phage tail sheath family protein [R] COG4386 Mu-like prophage tail sheath protein gpL gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=M479_243 M479_2430 M479_2430 M479_2430 2668678 2669253 + BON domain protein [R] COG2823 Predicted periplasmic or secreted lipoprotein gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2430 M479_2431 M479_2431 mtgA mtgA 2669460 2670185 - monofunctional biosynthetic peptidoglycan transglycosylase mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase~[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein) gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2431 M479_2432 M479_2432 M479_2432 2670274 2670834 - DJ-1/PfpI family protein [Q] COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2432 M479_2433 M479_2433 M479_2433 2671076 2673412 - sensory box protein [T] COG0642 Signal transduction histidine kinase gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2433 M479_2434 M479_2434 M479_2434 2673676 2674599 - radical SAM superfamily protein [R] COG1242 Predicted Fe-S oxidoreductase gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2434 M479_2435 M479_2435 M479_2435 2675422 2679879 + glutamine amidotransferases class-II family protein [E] COG0070 Glutamate synthase domain 3 gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2435 M479_2436 M479_2436 M479_2436 2679889 2681307 + glutamate synthase%2C small subunit domain protein gltD_gamma_fam: glutamate synthase%2C small subunit domain protein~[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2436 M479_2437 M479_2437 M479_2437 2681748 2682233 + putative exported protein gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2437 M479_2438 M479_2438 M479_2438 2682386 2682901 - stringent starvation B family protein [R] COG2969 Stringent starvation protein B gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2438 M479_2439 M479_2439 M479_2439 2682907 2683548 - putative stringent starvation protein A [O] COG0625 Glutathione S-transferase gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2439 M479_244 M479_244 M479_244 252892 253260 + phage tail tube family protein gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=M479_244 M479_2440 M479_2440 rpsI rpsI 2683922 2684314 - 30S ribosomal protein S9 [J] COG0103 Ribosomal protein S9 gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2440 M479_2441 M479_2441 rplM rplM 2684329 2684757 - ribosomal protein L13 rplM_bact: ribosomal protein L13~[J] COG0102 Ribosomal protein L13 gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2441 M479_2442 M479_2442 M479_2442 2685070 2686197 - AFG1-like ATPase family protein [R] COG1485 Predicted ATPase gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2442 M479_2443 M479_2443 M479_2443 2686421 2686825 + hypothetical protein conserved hypothetical protein~[S] COG3105 Uncharacterized protein conserved in bacteria gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2443 M479_2444 M479_2444 M479_2444 2687096 2688469 + peptidase Do family protein degP_htrA_DO: peptidase Do family protein~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2444 M479_2445 M479_2445 M479_2445 2688586 2689044 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2445 M479_2446 M479_2446 degS degS 2689270 2690358 + periplasmic serine peptidase DegS protease_degS: periplasmic serine peptidase DegS~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2446 M479_2447 M479_2447 murA murA 2690539 2691801 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2447 M479_2448 M479_2448 M479_2448 2691955 2692209 - bolA-like family protein [K] COG5007 Predicted transcriptional regulator%2C BolA superfamily gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2448 M479_2449 M479_2449 M479_2449 2692356 2692658 - STAS domain protein [R] COG3113 Predicted NTP binding protein (contains STAS domain) gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2449 M479_245 M479_245 M479_245 253262 253561 + mu-like prophage FluMu gp41 family protein gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=M479_245 M479_2450 M479_2450 M479_2450 2692694 2693317 - toluene tolerance%2C Ttg2 family protein [Q] COG2854 ABC-type transport system involved in resistance to organic solvents%2C auxiliary component gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2450 M479_2451 M479_2451 mlaD mlaD 2693330 2693887 - outer membrane lipid asymmetry maintenance protein MlaD OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD~[Q] COG1463 ABC-type transport system involved in resistance to organic solvents%2C periplasmic component gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2451 M479_2452 M479_2452 M479_2452 2693892 2694674 - putative phospholipid ABC transporter permease protein mlaE [Q] COG0767 ABC-type transport system involved in resistance to organic solvents%2C permease component gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2452 M479_2453 M479_2453 M479_2453 2694892 2695710 - ABC transporter family protein [Q] COG1127 ABC-type transport system involved in resistance to organic solvents%2C ATPase component gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2453 M479_2454 M479_2454 M479_2454 2695975 2696949 + sodium/calcium exchanger family protein [P] COG0530 Ca2+/Na+ antiporter gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2454 M479_2455 M479_2455 M479_2455 2697060 2698046 + sugar isomerase%2C KpsF/GutQ family protein kpsF: sugar isomerase%2C KpsF/GutQ family protein~[M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2455 M479_2456 M479_2456 kdsC kdsC 2698155 2698718 + 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [R] COG1778 Low specificity phosphatase (HAD superfamily) gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2456 M479_2457 M479_2457 lptC lptC 2698715 2699278 + LPS export ABC transporter periplasmic protein LptC lptC_YrbK: LPS export ABC transporter periplasmic protein LptC~[S] COG3117 Uncharacterized protein conserved in bacteria gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2457 M479_2458 M479_2458 lptA lptA 2699262 2699807 + lipopolysaccharide transport periplasmic protein LptA outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA~[S] COG1934 Uncharacterized protein conserved in bacteria gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2458 M479_2459 M479_2459 lptB lptB 2699814 2700539 + LPS export ABC transporter ATP-binding protein LPS_export_lptB: LPS export ABC transporter ATP-binding protein~[R] COG1137 ABC-type (unclassified) transport system%2C ATPase component gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2459 M479_246 M479_246 M479_246 253682 255175 + putative bacteriophage coat protein gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=M479_246 M479_2460 M479_2460 rpoN rpoN 2700601 2702034 + RNA polymerase sigma-54 factor rpoN_sigma: RNA polymerase sigma-54 factor~[K] COG1508 DNA-directed RNA polymerase specialized sigma subunit%2C sigma54 homolog gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2460 M479_2461 M479_2461 raiA raiA 2702058 2702165 + ribosomal subunit interface protein yfiA: ribosomal subunit interface protein~[J] COG1544 Ribosome-associated protein Y (PSrp-1) gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2461 M479_2462 M479_2462 ptsN ptsN 2702463 2702945 + PTS IIA-like nitrogen-regulatory protein PtsN nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN~[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2462 M479_2463 M479_2463 M479_2463 2703251 2704105 + hypothetical protein conserved hypothetical protein~[R] COG1660 Predicted P-loop-containing kinase gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2463 M479_2464 M479_2464 ptsO ptsO 2704102 2704374 + phosphocarrier protein NPr [G] COG1925 Phosphotransferase system%2C HPr-related proteins gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2464 M479_2465 M479_2465 pyrB pyrB 2704712 2705647 + aspartate carbamoyltransferase asp_carb_tr: aspartate carbamoyltransferase~[F] COG0540 Aspartate carbamoyltransferase%2C catalytic chain gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2465 M479_2466 M479_2466 pyrI pyrI 2705659 2706123 + aspartate carbamoyltransferase%2C regulatory subunit ATCase_reg: aspartate carbamoyltransferase%2C regulatory subunit~[F] COG1781 Aspartate carbamoyltransferase%2C regulatory subunit gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2466 M479_2467 M479_2467 M479_2467 2706261 2706647 + reactive intermediate/imine deaminase family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2467 M479_2468 M479_2468 M479_2468 2706946 2707422 + putative exported protein gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2468 M479_2469 M479_2469 treR treR 2707656 2708609 + trehalose operon repressor trehalos_R_Ecol: trehalose operon repressor~[K] COG1609 Transcriptional regulators gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2469 M479_247 M479_247 M479_247 255442 256848 + DNA circularization family protein [R] COG4228 Mu-like prophage DNA circulation protein gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=M479_247 M479_2470 M479_2470 treP treP 2709020 2710435 + PTS system%2C trehalose-specific IIBC component PTS-IIBC-Tre: PTS system%2C trehalose-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2470 M479_2471 M479_2471 treC treC 2710530 2712197 + alpha%2Calpha-phosphotrehalase trehalose_treC: alpha%2Calpha-phosphotrehalase~[G] COG0366 Glycosidases gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2471 M479_2472 M479_2472 M479_2472 2712550 2712960 + hypothetical protein transcription elongation factor%2C GreA/GreB%2C C-term family protein~[K] COG0782 Transcription elongation factor gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2472 M479_2473 M479_2473 cybC cybC 2713200 2713586 - soluble cytochrome b562 [C] COG3783 Soluble cytochrome b562 gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2473 M479_2474 M479_2474 M479_2474 2713794 2714402 - hypothetical protein conserved hypothetical protein gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2474 M479_2475 M479_2475 M479_2475 2714687 2716027 - modulator of DNA gyrase family protein [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2475 M479_2476 M479_2476 M479_2476 2716208 2716756 + hypothetical protein conserved hypothetical protein~[S] COG3028 Uncharacterized protein conserved in bacteria gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2476 M479_2477 M479_2477 M479_2477 2716868 2717149 - hypothetical protein conserved hypothetical protein~[K] COG2732 Barstar%2C RNAse (barnase) inhibitor gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2477 M479_2478 M479_2478 M479_2478 2717154 2717627 - ribonuclease family protein gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2478 M479_2479 M479_2479 M479_2479 2717822 2718160 - aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2479 M479_248 M479_248 M479_248 256845 257900 + phage late control protein [R] COG4379 Mu-like prophage tail protein gpP gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=M479_248 M479_2480 M479_2480 M479_2480 2718157 2719290 - aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2480 M479_2481 M479_2481 M479_2481 2719557 2721512 - fusaric acid resistance family protein [S] COG1289 Predicted membrane protein gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2481 M479_2482 M479_2482 M479_2482 2721514 2722449 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[V] COG1566 Multidrug resistance efflux pump gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2482 M479_2483 M479_2483 M479_2483 2722457 2722660 - hypothetical protein conserved hypothetical protein gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2483 M479_2484 M479_2484 M479_2484 2722963 2723874 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2484 M479_2485 M479_2485 M479_2485 2724135 2725001 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2485 M479_2486 M479_2486 M479_2486 2725237 2727738 + virulence plasmid 28.1kDa A family protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2486 M479_2487 M479_2487 M479_2487 2727779 2731372 + putative insecticidal toxin complex protein TcaB gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2487 M479_2488 M479_2488 M479_2488 2731429 2735919 + virulence plasmid 65kDa B family protein gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2488 M479_2489 M479_2489 M479_2489 2736053 2736355 + putative membrane protein gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2489 M479_249 M479_249 M479_249 257916 258206 + putative bacteriophage (Baseplate assembly) protein [S] COG4384 Mu-like prophage protein gp45 gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=M479_249 M479_2490 M479_2490 M479_2490 2736368 2736790 + D-alanyl-D-alanine carboxypeptidase family protein gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2490 M479_2491 M479_2491 M479_2491 2736787 2737146 + putative exported protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2491 M479_2492 M479_2492 M479_2492 2737347 2740178 + RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2492 M479_2493 M479_2493 M479_2493 2740203 2740985 + RHS Repeat family protein [M] COG3209 Rhs family protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2493 M479_2494 M479_2494 M479_2494 2740982 2743060 + RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2494 M479_2495 M479_2495 M479_2495 2743263 2744708 - modulator of DNA gyrase family protein [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2495 M479_2496 M479_2496 M479_2496 2744720 2745589 - carbon-nitrogen hydrolase family protein [R] COG0388 Predicted amidohydrolase gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2496 M479_2497 M479_2497 M479_2497 2745586 2749509 - hypothetical protein conserved hypothetical protein~[S] COG3164 Predicted membrane protein gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2497 M479_2498 M479_2498 rng rng 2749603 2751072 - ribonuclease G [J] COG1530 Ribonucleases G and E gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2498 M479_2499 M479_2499 maf maf 2751062 2751655 - septum formation protein Maf maf: septum formation protein Maf~[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2499 M479_25 M479_25 M479_25 31090 31680 + bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=M479_25 M479_250 M479_250 M479_250 258151 258513 + bacteriophage Mu Gp45 family protein [S] COG4384 Mu-like prophage protein gp45 gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=M479_250 M479_2500 M479_2500 mreD mreD 2751669 2752157 - rod shape-determining protein MreD shape_MreD: rod shape-determining protein MreD~[M] COG2891 Cell shape-determining protein gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2500 M479_2501 M479_2501 mreC mreC 2752154 2753149 - rod shape-determining protein MreC mreC: rod shape-determining protein MreC~[M] COG1792 Cell shape-determining protein gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2501 M479_2502 M479_2502 mreB mreB 2753353 2754396 - rod shape-determining protein mreB [D] COG1077 Actin-like ATPase involved in cell morphogenesis gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2502 M479_2503 M479_2503 M479_2503 2754733 2756646 - EAL domain protein [T] COG2200 FOG: EAL domain gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2503 M479_2504 M479_2504 M479_2504 2757047 2758024 + quinone oxidoreductase%2C YhdH/YhfP family protein oxido_YhdH: quinone oxidoreductase%2C YhdH/YhfP family protein~[CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2504 M479_2505 M479_2505 M479_2505 2758247 2759329 + oxidoreductase molybdopterin binding domain protein [R] COG2041 Sulfite oxidase and related enzymes gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2505 M479_2506 M479_2506 M479_2506 2759329 2759949 + ferric reductase like transmembrane component family protein [S] COG2717 Predicted membrane protein gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2506 M479_2507 M479_2507 aroQ aroQ 2760212 2760664 + 3-dehydroquinate dehydratase%2C type II aroQ: 3-dehydroquinate dehydratase%2C type II~[E] COG0757 3-dehydroquinate dehydratase II gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2507 M479_2508 M479_2508 accB accB 2760822 2761286 + acetyl-CoA carboxylase%2C biotin carboxyl carrier protein BCCP: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~[I] COG0511 Biotin carboxyl carrier protein gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2508 M479_2509 M479_2509 accC accC 2761298 2762647 + acetyl-CoA carboxylase%2C biotin carboxylase subunit accC: acetyl-CoA carboxylase%2C biotin carboxylase subunit~[I] COG0439 Biotin carboxylase gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2509 M479_251 M479_251 M479_251 258510 258965 + phage GP46 family protein [S] COG4381 Mu-like prophage protein gp46 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=M479_251 M479_2510 M479_2510 M479_2510 2762893 2763069 - hypothetical protein conserved hypothetical protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2510 M479_2511 M479_2511 M479_2511 2764128 2764370 + hypothetical protein conserved hypothetical protein~[S] COG3924 Predicted membrane protein gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2511 M479_2512 M479_2512 panF panF 2764360 2765814 + sodium/pantothenate symporter panF: sodium/pantothenate symporter~[H] COG4145 Na+/panthothenate symporter gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2512 M479_2513 M479_2513 prmA prmA 2765890 2766771 + ribosomal protein L11 methyltransferase prmA: ribosomal protein L11 methyltransferase~[J] COG2264 Ribosomal protein L11 methylase gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2513 M479_2514 M479_2514 dusB dusB 2767360 2768325 + tRNA-dihydrouridine synthase B [J] COG0042 tRNA-dihydrouridine synthase gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2514 M479_2515 M479_2515 fis fis 2768350 2768646 + DNA-binding protein fis [KL] COG2901 Factor for inversion stimulation Fis%2C transcriptional activator gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2515 M479_2516 M479_2516 M479_2516 2769400 2769876 - hypothetical protein conserved hypothetical protein gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2516 M479_2517 M479_2517 M479_2517 2769942 2770604 - bacterial regulatory s%2C gntR family protein [K] COG1802 Transcriptional regulators gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2517 M479_2518 M479_2518 M479_2518 2770694 2772058 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2518 M479_2519 M479_2519 M479_2519 2772212 2772607 - carboxymuconolactone decarboxylase family protein [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2519 M479_252 M479_252 M479_252 258969 260105 + baseplate J-like family protein [S] COG3299 Uncharacterized homolog of phage Mu protein gp47 gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=M479_252 M479_2520 M479_2520 M479_2520 2772785 2773675 - NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase family protein [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2520 M479_2521 M479_2521 M479_2521 2773740 2774552 - metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2521 M479_2522 M479_2522 slyB slyB 2775028 2775495 + outer membrane lipoprotein slyB [M] COG3133 Outer membrane lipoprotein gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2522 M479_2523 M479_2523 M479_2523 2776028 2776240 + 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2523 M479_2524 M479_2524 M479_2524 2776500 2776712 + 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2524 M479_2525 M479_2525 M479_2525 2776895 2777353 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2525 M479_2526 M479_2526 M479_2526 2777758 2778933 + hypothetical protein conserved hypothetical protein~[O] COG1076 DnaJ-domain-containing proteins 1 gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2526 M479_2527 M479_2527 M479_2527 2779040 2780386 - esterase-like activity of phytase family protein [S] COG4222 Uncharacterized protein conserved in bacteria gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2527 M479_2528 M479_2528 M479_2528 2780640 2781491 + hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2528 M479_2529 M479_2529 M479_2529 2781681 2782286 - SIS domain protein [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2529 M479_253 M479_253 M479_253 260102 260362 + hypothetical protein conserved hypothetical protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=M479_253 M479_2530 M479_2530 M479_2530 2782283 2783920 - putative carbohydrate kinase [C] COG1069 Ribulose kinase gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2530 M479_2531 M479_2531 M479_2531 2783939 2784892 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2531 M479_2532 M479_2532 M479_2532 2784894 2785883 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2532 M479_2533 M479_2533 ccmA ccmA 2785876 2787372 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2533 M479_2534 M479_2534 M479_2534 2787576 2788565 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2534 M479_2535 M479_2535 lpxL lpxL 2789372 2790292 + lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein~[M] COG1560 Lauroyl/myristoyl acyltransferase gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2535 M479_2536 M479_2536 M479_2536 2790444 2791631 + hypothetical protein conserved hypothetical protein gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2536 M479_2537 M479_2537 M479_2537 2791849 2793498 - Na+/H+ antiporter a_cpa1: Na+/H+ antiporter~[P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2537 M479_2538 M479_2538 M479_2538 2793847 2795202 - permease family protein [R] COG2252 Permeases gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2538 M479_2539 M479_2539 M479_2539 2795656 2795859 + relB antitoxin family protein [L] COG3077 DNA-damage-inducible protein J gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2539 M479_254 M479_254 M479_254 260359 260706 + hypothetical protein conserved hypothetical protein~[S] COG3778 Uncharacterized protein conserved in bacteria gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=M479_254 M479_2540 M479_2540 M479_2540 2796478 2797272 - ABC transporter family protein [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system%2C ATPase component gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2540 M479_2541 M479_2541 M479_2541 2797269 2798063 - binding--dependent transport system inner membrane component family protein [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2541 M479_2542 M479_2542 ssuD ssuD 2798075 2799223 - alkanesulfonate monooxygenase%2C FMNH(2)-dependent alk_sulf_monoox: alkanesulfonate monooxygenase%2C FMNH(2)-dependent~[C] COG2141 Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2542 M479_2543 M479_2543 M479_2543 2799242 2800378 - ABC transporter%2C substrate-binding%2C aliphatic sulfonates family protein ssuA_fam: ABC transporter%2C substrate-binding%2C aliphatic sulfonates family protein~[P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems%2C periplasmic components gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2543 M479_2544 M479_2544 ssuE ssuE 2800393 2800974 - FMN reductase FMN_reduc_SsuE: FMN reductase~[R] COG0431 Predicted flavoprotein gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2544 M479_2545 M479_2545 deoC deoC 2801445 2802146 + deoxyribose-phosphate aldolase deoC: deoxyribose-phosphate aldolase~[F] COG0274 Deoxyribose-phosphate aldolase gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2545 M479_2546 M479_2546 M479_2546 2802303 2803232 + phosphomethylpyrimidine kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2546 M479_2547 M479_2547 M479_2547 2803238 2803741 + rbsD / FucU transport family protein [G] COG1869 ABC-type ribose transport system%2C auxiliary component gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2547 M479_2548 M479_2548 M479_2548 2803903 2804769 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2548 M479_2549 M479_2549 M479_2549 2805039 2806169 + oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2549 M479_255 M479_255 M479_255 261094 261582 + phage Tail Collar domain protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=M479_255 M479_2550 M479_2550 M479_2550 2806166 2807065 + xylose isomerase-like TIM barrel family protein [G] COG1082 Sugar phosphate isomerases/epimerases gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2550 M479_2551 M479_2551 M479_2551 2807412 2808206 - hypothetical protein conserved hypothetical protein gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2551 M479_2552 M479_2552 M479_2552 2808215 2812753 - RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2552 M479_2553 M479_2553 M479_2553 2812798 2813220 - hypothetical protein conserved hypothetical protein~[S] COG5435 Uncharacterized conserved protein gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2553 M479_2554 M479_2554 M479_2554 2813223 2815421 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2554 M479_2555 M479_2555 M479_2555 2815443 2815619 - impA domain family protein [S] COG3515 Uncharacterized protein conserved in bacteria gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2555 M479_2556 M479_2556 M479_2556 2815782 2816189 + helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2556 M479_2557 M479_2557 M479_2557 2816271 2816495 + toxin SymE%2C type I toxin-antitoxin system family protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2557 M479_2558 M479_2558 M479_2558 2816492 2816638 + hypothetical protein conserved hypothetical protein gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2558 M479_2559 M479_2559 M479_2559 2816812 2817297 - SMI1 / KNR4 family protein gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2559 M479_256 M479_256 M479_256 261880 262620 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=M479_256 M479_2560 M479_2560 M479_2560 2817299 2818669 - RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2560 M479_2561 M479_2561 M479_2561 2818697 2821561 - RHS Repeat family protein [M] COG3209 Rhs family protein gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2561 M479_2562 M479_2562 M479_2562 2821554 2822012 - hypothetical protein conserved hypothetical protein~[S] COG5435 Uncharacterized conserved protein gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2562 M479_2563 M479_2563 M479_2563 2822018 2824408 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2563 M479_2564 M479_2564 M479_2564 2824430 2824963 - impA domain family protein [S] COG3515 Uncharacterized protein conserved in bacteria gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2564 M479_2565 M479_2565 M479_2565 2824960 2825742 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2565 M479_2566 M479_2566 M479_2566 2825867 2829400 - intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2566 M479_2567 M479_2567 M479_2567 2829432 2830820 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2567 M479_2568 M479_2568 M479_2568 2830826 2831512 - hypothetical protein conserved hypothetical protein gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2568 M479_2569 M479_2569 M479_2569 2831509 2832306 - transcriptional regulator%2C Fis family gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2569 M479_257 M479_257 M479_257 262789 262914 + hypothetical protein conserved hypothetical protein gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=M479_257 M479_2570 M479_2570 clpV clpV 2832303 2834897 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2570 M479_2571 M479_2571 M479_2571 2834908 2835660 - type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2571 M479_2572 M479_2572 M479_2572 2835675 2837021 - hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2572 M479_2573 M479_2573 M479_2573 2837024 2837569 - type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2573 M479_2574 M479_2574 M479_2574 2837569 2838885 - putative fHA domain protein [T] COG3456 Uncharacterized conserved protein%2C contains FHA domain gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2574 M479_2575 M479_2575 M479_2575 2839011 2840099 - hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2575 M479_2576 M479_2576 M479_2576 2840063 2840806 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2576 M479_2577 M479_2577 M479_2577 2840857 2841372 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2577 M479_2578 M479_2578 M479_2578 2842101 2843327 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2578 M479_2579 M479_2579 M479_2579 2841426 2842211 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2579 M479_258 M479_258 M479_258 262911 264347 + glycosyl hydrolase 1 family protein [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=M479_258 M479_2580 M479_2580 M479_2580 2843327 2843767 - lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2580 M479_2581 M479_2581 M479_2581 2843774 2845255 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2581 M479_2582 M479_2582 M479_2582 2845323 2845820 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2582 M479_2583 M479_2583 M479_2583 2846344 2846862 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2583 M479_2584 M479_2584 M479_2584 2847014 2847424 - hypothetical protein conserved hypothetical protein gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2584 M479_2585 M479_2585 M479_2585 2847763 2848674 - maltose operon periplasmic family protein gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2585 M479_2586 M479_2586 lamB lamB 2848915 2850186 - maltoporin [G] COG4580 Maltoporin (phage lambda and maltose receptor) gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2586 M479_2587 M479_2587 malK malK 2850257 2851366 - maltose/maltodextrin import ATP-binding protein MalK [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2587 M479_2588 M479_2588 M479_2588 2851370 2851606 - putative glycosidase gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2588 M479_2589 M479_2589 malE malE 2852194 2853405 + maltose-binding periplasmic protein [G] COG2182 Maltose-binding periplasmic proteins/domains gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2589 M479_259 M479_259 M479_259 264473 264835 - hypothetical protein conserved hypothetical protein gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=M479_259 M479_2590 M479_2590 M479_2590 2853592 2855169 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2590 M479_2591 M479_2591 M479_2591 2855183 2856073 + binding--dependent transport system inner membrane component family protein [G] COG3833 ABC-type maltose transport systems%2C permease component gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2591 M479_2592 M479_2592 M479_2592 2856216 2856623 - phosphate-starvation-inducible E family protein [S] COG3223 Predicted membrane protein gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2592 M479_2593 M479_2593 pgi pgi 2856758 2858404 - glucose-6-phosphate isomerase [G] COG0166 Glucose-6-phosphate isomerase gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2593 M479_2594 M479_2594 M479_2594 2858774 2860159 + aspartate kinase%2C monofunctional class asp_kin_monofn: aspartate kinase%2C monofunctional class~[E] COG0527 Aspartokinases gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2594 M479_2595 M479_2595 shlB shlB 2860727 2862415 + hemolysin transporter protein shlB [U] COG2831 Hemolysin activation/secretion protein gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2595 M479_2596 M479_2596 M479_2596 2862485 2865259 + hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2596 M479_2597 M479_2597 M479_2597 2865225 2867393 + hemagluttinin repeat family protein [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2597 M479_2598 M479_2598 metH metH 2867489 2871184 - methionine synthase metH: methionine synthase~[E] COG1410 Methionine synthase I%2C cobalamin-binding domain gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2598 M479_2599 M479_2599 iclR iclR 2871399 2872241 + acetate operon repressor [K] COG1414 Transcriptional regulator gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2599 M479_26 M479_26 M479_26 31990 32469 - putative cold-shock protein gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=M479_26 M479_260 M479_260 M479_260 265172 265264 - hypothetical protein conserved hypothetical protein~[L] COG3728 Phage terminase%2C small subunit gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=M479_260 M479_2600 M479_2600 M479_2600 2872361 2874088 - isocitrate dehydrogenase kinase/phosphatase family protein [T] COG4579 Isocitrate dehydrogenase kinase/phosphatase gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2600 M479_2601 M479_2601 aceA aceA 2874344 2875651 - isocitrate lyase isocit_lyase: isocitrate lyase~[C] COG2224 Isocitrate lyase gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2601 M479_2602 M479_2602 aceB aceB 2875698 2877296 - malate synthase A malate_syn_A: malate synthase A~[C] COG2225 Malate synthase gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2602 M479_2603 M479_2603 metA metA 2877717 2878646 - homoserine O-succinyltransferase metA: homoserine O-succinyltransferase~[E] COG1897 Homoserine trans-succinylase gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2603 M479_2604 M479_2604 M479_2604 2878714 2878986 + hypothetical protein conserved hypothetical protein gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2604 M479_2605 M479_2605 M479_2605 2879386 2879498 - 5S ribosomal RNA rRNA gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2605 M479_2606 M479_2606 M479_2606 2879542 2879617 - tRNA-Thr tRNA gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2606 M479_2607 M479_2607 M479_2607 2879633 2879745 - 5S ribosomal RNA rRNA gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2607 M479_2609 M479_2609 M479_2609 2879859 2882762 - 23S ribosomal RNA rRNA gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2609 M479_261 M479_261 M479_261 265535 266023 - hypothetical protein conserved hypothetical protein gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=M479_261 M479_2610 M479_2610 M479_2610 2882984 2883059 - tRNA-Ala tRNA gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2610 M479_2611 M479_2611 M479_2611 2883111 2883187 - tRNA-Ile tRNA gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2611 M479_2612 M479_2612 M479_2612 2883296 2884824 - 16S ribosomal RNA rRNA gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2612 M479_2613 M479_2613 clpB clpB 2885349 2887922 - ATP-dependent chaperone protein ClpB chaperone_ClpB: ATP-dependent chaperone protein ClpB~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2613 M479_2614 M479_2614 M479_2614 2888052 2888783 - multi-copper polyphenol oxidoreductase laccase family protein [S] COG1496 Uncharacterized conserved protein gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2614 M479_2615 M479_2615 M479_2615 2888785 2889762 - pseudouridine synthase%2C RluA family protein rluA_subfam: pseudouridine synthase%2C RluA family protein~[J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2615 M479_2616 M479_2616 M479_2616 2889898 2890629 + hypothetical protein conserved hypothetical protein~[R] COG4105 DNA uptake lipoprotein gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2616 M479_2617 M479_2617 raiA raiA 2890984 2891346 + ribosomal subunit interface protein [J] COG1544 Ribosome-associated protein Y (PSrp-1) gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2617 M479_2618 M479_2618 M479_2618 2891709 2892866 + chorismate mutase CM_P_1: chorismate mutase~[E] COG0077 Prephenate dehydratase gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2618 M479_2619 M479_2619 tyrA tyrA 2892971 2894092 - chorismate mutase CM_T: chorismate mutase~[E] COG0287 Prephenate dehydrogenase gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2619 M479_262 M479_262 M479_262 266036 267184 - DNase/tRNase domain of colicin-like bacteriocin family protein gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=M479_262 M479_2620 M479_2620 M479_2620 2894105 2894320 - DAHP synthetase I family protein [E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2620 M479_2621 M479_2621 M479_2621 2894359 2895138 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2621 M479_2622 M479_2622 M479_2622 2895138 2896160 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2622 M479_2623 M479_2623 M479_2623 2896187 2897134 - 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2623 M479_2624 M479_2624 M479_2624 2897367 2898083 + response regulator [KT] COG3279 Response regulator of the LytR/AlgR family gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2624 M479_2625 M479_2625 M479_2625 2898512 2899192 + anaerobic c4-dicarboxylate membrane transporter family protein [R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2625 M479_2626 M479_2626 M479_2626 2899261 2899857 + anaerobic c4-dicarboxylate membrane transporter family protein [R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2626 M479_2627 M479_2627 M479_2627 2900180 2900947 + hypothetical protein conserved hypothetical protein~[M] COG3137 Putative salt-induced outer membrane protein gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2627 M479_2628 M479_2628 rplS rplS 2901209 2901556 - ribosomal protein L19 rplS_bact: ribosomal protein L19~[J] COG0335 Ribosomal protein L19 gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2628 M479_2629 M479_2629 trmD trmD 2901637 2902377 - tRNA (guanine(37)-N(1))-methyltransferase trmD: tRNA (guanine(37)-N(1))-methyltransferase~[J] COG0336 tRNA-(guanine-N1)-methyltransferase gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2629 M479_263 M479_263 M479_263 267541 267924 - hypothetical protein conserved hypothetical protein~[L] COG5519 Superfamily II helicase and inactivated derivatives gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=M479_263 M479_2630 M479_2630 rimM rimM 2902416 2902964 - 16S rRNA processing protein RimM 16S_RimM: 16S rRNA processing protein RimM~[J] COG0806 RimM protein%2C required for 16S rRNA processing gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2630 M479_2631 M479_2631 rpsP rpsP 2902986 2903234 - ribosomal protein S16 S16: ribosomal protein S16~[J] COG0228 Ribosomal protein S16 gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2631 M479_2632 M479_2632 ffh ffh 2903462 2904823 - signal recognition particle protein ffh: signal recognition particle protein~[U] COG0541 Signal recognition particle GTPase gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2632 M479_2633 M479_2633 ypjD ypjD 2904989 2905780 + inner membrane protein ypjD [R] COG4137 ABC-type uncharacterized transport system%2C permease component gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2633 M479_2634 M479_2634 M479_2634 2905852 2907132 + CBS domain protein [P] COG4536 Putative Mg2+ and Co2+ transporter CorB gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2634 M479_2635 M479_2635 luxS luxS 2907221 2907736 - S-ribosylhomocysteine lyase [T] COG1854 LuxS protein involved in autoinducer AI2 synthesis gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2635 M479_2636 M479_2636 gshA gshA 2907904 2909463 - glutamate--cysteine ligase glu_cys_ligase: glutamate--cysteine ligase~[H] COG2918 Gamma-glutamylcysteine synthetase gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2636 M479_2637 M479_2637 M479_2637 2909546 2909974 - hypothetical protein conserved hypothetical protein~[S] COG1238 Predicted membrane protein gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2637 M479_2638 M479_2638 M479_2638 2909971 2910537 - HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2638 M479_2639 M479_2639 M479_2639 2910960 2911036 - tRNA-Arg tRNA gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2639 M479_264 M479_264 M479_264 267974 268050 - tRNA-Pro tRNA gene263 http://www.ncbi.nlm.nih.gov/gene/?term=M479_264 M479_2640 M479_2640 M479_2640 2911094 2911170 - tRNA-Arg tRNA gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2640 M479_2641 M479_2641 M479_2641 2911179 2911271 - tRNA-Ser tRNA gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2641 M479_2642 M479_2642 csrA csrA 2911634 2911819 - carbon storage regulator csrA: carbon storage regulator~[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2642 M479_2643 M479_2643 alaS alaS 2912069 2914696 - alanine--tRNA ligase alaS: alanine--tRNA ligase~[J] COG0013 Alanyl-tRNA synthetase gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2643 M479_2644 M479_2644 M479_2644 2914836 2915399 - recX family protein [R] COG2137 Uncharacterized protein conserved in bacteria gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2644 M479_2645 M479_2645 recA recA 2915537 2916607 - protein RecA tigrfam_recA: protein RecA~[L] COG0468 RecA/RadA recombinase gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2645 M479_2646 M479_2646 ygaD ygaD 2916722 2917210 - protein YgaD [R] COG1546 Uncharacterized protein (competence- and mitomycin-induced) gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2646 M479_2647 M479_2647 M479_2647 2917527 2918867 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2647 M479_2648 M479_2648 M479_2648 2919115 2920059 + transcriptional regulator%2C putative [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2648 M479_2649 M479_2649 M479_2649 2920281 2921705 - hypothetical protein L-fucose isomerase%2C C-terminal domain protein~[G] COG2407 L-fucose isomerase and related proteins gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2649 M479_265 M479_265 M479_265 268155 269951 - type I phosphodiesterase / nucleotide pyrophosphatase family protein [R] COG3083 Predicted hydrolase of alkaline phosphatase superfamily gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=M479_265 M479_2650 M479_2650 M479_2650 2921726 2923213 - hypothetical protein FGGY family of carbohydrate kinase%2C N-terminal domain protein~[C] COG0554 Glycerol kinase gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2650 M479_2651 M479_2651 M479_2651 2923216 2924160 - hypothetical protein transketolase%2C C-terminal domain protein~[G] COG3958 Transketolase%2C C-terminal subunit gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2651 M479_2652 M479_2652 M479_2652 2924153 2924983 - hypothetical protein thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein~[G] COG3959 Transketolase%2C N-terminal subunit gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2652 M479_2653 M479_2653 M479_2653 2925239 2926381 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2653 M479_2654 M479_2654 ccmA ccmA 2926381 2927904 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2654 M479_2655 M479_2655 M479_2655 2927904 2928521 - hypothetical protein conserved hypothetical protein~[R] COG5618 Predicted periplasmic lipoprotein gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2655 M479_2656 M479_2656 M479_2656 2928614 2929555 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2656 M479_2657 M479_2657 katG katG 2930091 2932304 + catalase/peroxidase HPI cat_per_HPI: catalase/peroxidase HPI~[P] COG0376 Catalase (peroxidase I) gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2657 M479_2658 M479_2658 cybC cybC 2932381 2932764 + soluble cytochrome b562 [C] COG3783 Soluble cytochrome b562 gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2658 M479_2659 M479_2659 M479_2659 2932912 2933442 + prokaryotic cytochrome b561 family protein [C] COG3038 Cytochrome B561 gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2659 M479_266 M479_266 M479_266 269979 270206 - hypothetical protein conserved hypothetical protein~[S] COG3082 Uncharacterized protein conserved in bacteria gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=M479_266 M479_2660 M479_2660 M479_2660 2933699 2934409 - nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2660 M479_2661 M479_2661 M479_2661 2934555 2935415 - DMSO reductase anchor subunit family protein [R] COG3302 DMSO reductase anchor subunit gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2661 M479_2662 M479_2662 dmsB dmsB 2935417 2936034 - dimethylsulfoxide reductase%2C chain B DMSO_dmsB: dimethylsulfoxide reductase%2C chain B~[C] COG0437 Fe-S-cluster-containing hydrogenase components 1 gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2662 M479_2663 M479_2663 dmsA dmsA 2936046 2938496 - anaerobic dimethyl sulfoxide reductase chain A [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2663 M479_2664 M479_2664 araD araD 2938959 2939654 - L-ribulose-5-phosphate 4-epimerase araD: L-ribulose-5-phosphate 4-epimerase~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2664 M479_2665 M479_2665 M479_2665 2940357 2941166 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2665 M479_2666 M479_2666 M479_2666 2941327 2942331 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2666 M479_2667 M479_2667 M479_2667 2942480 2943994 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2667 M479_2668 M479_2668 M479_2668 2943987 2944976 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2668 M479_2669 M479_2669 M479_2669 2944989 2946026 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2669 M479_267 M479_267 M479_267 270384 271388 + 37-kD nucleoid-associated bacterial family protein [R] COG3081 Nucleoid-associated protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=M479_267 M479_2670 M479_2670 M479_2670 2946232 2947113 + xylose isomerase-like TIM barrel family protein [G] COG3623 Putative L-xylulose-5-phosphate 3-epimerase gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2670 M479_2671 M479_2671 M479_2671 2947124 2948620 + hypothetical protein FGGY family of carbohydrate kinase%2C N-terminal domain protein~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2671 M479_2672 M479_2672 M479_2672 2949018 2950661 + hydrolyase%2C tartrate alpha subunit/fumarate%2C Fe-S type domain protein ttdA_fumA_fumB: hydrolyase%2C tartrate alpha subunit/fumarate%2C Fe-S type domain protein~[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I%2C N-terminal domain gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2672 M479_2673 M479_2673 M479_2673 2950844 2951095 + hypothetical protein conserved hypothetical protein gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2673 M479_2674 M479_2674 map map 2951092 2951712 + methionine aminopeptidase%2C type I met_pdase_I: methionine aminopeptidase%2C type I~[J] COG0024 Methionine aminopeptidase gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2674 M479_2675 M479_2675 M479_2675 2952269 2953456 - hypothetical protein shET2 enterotoxin%2C N-terminal region family protein~[R] COG0666 FOG: Ankyrin repeat gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2675 M479_2676 M479_2676 M479_2676 2953889 2955985 - tonB dependent receptor family protein [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2676 M479_2677 M479_2677 M479_2677 2956158 2956409 + hypothetical protein conserved hypothetical protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2677 M479_2678 M479_2678 M479_2678 2956646 2958025 + cytochrome c family protein [P] COG1858 Cytochrome c peroxidase gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2678 M479_2679 M479_2679 M479_2679 2958096 2958860 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2679 M479_268 M479_268 M479_268 271589 272047 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=M479_268 M479_2680 M479_2680 M479_2680 2959284 2959487 + hypothetical protein conserved hypothetical protein gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2680 M479_2681 M479_2681 M479_2681 2959698 2959961 + faeA-like family protein gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2681 M479_2682 M479_2682 M479_2682 2960208 2960549 + bacterial regulatory%2C arsR family protein [K] COG0640 Predicted transcriptional regulators gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2682 M479_2683 M479_2683 arsB arsB 2960634 2961923 + arsenite/antimonite efflux pump membrane family protein 2a45: arsenite/antimonite efflux pump membrane family protein~[P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2683 M479_2684 M479_2684 M479_2684 2962462 2963433 + sigma-70%2C region 4 family protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2684 M479_2685 M479_2685 dhaL dhaL 2963554 2964228 - dihydroxyacetone kinase%2C L subunit dha_L_ycgS: dihydroxyacetone kinase%2C L subunit~[G] COG2376 Dihydroxyacetone kinase gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2685 M479_2686 M479_2686 M479_2686 2964235 2965236 - dak1 domain protein [G] COG2376 Dihydroxyacetone kinase gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2686 M479_2687 M479_2687 M479_2687 2965323 2966093 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2687 M479_2688 M479_2688 M479_2688 2966157 2967272 - zinc-binding dehydrogenase family protein [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2688 M479_2689 M479_2689 rpiB rpiB 2967755 2968210 + ribose 5-phosphate isomerase B rpiB: ribose 5-phosphate isomerase B~[G] COG0698 Ribose 5-phosphate isomerase RpiB gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2689 M479_269 M479_269 M479_269 272186 272470 - ribosomal L25p family protein [J] COG1825 Ribosomal protein L25 (general stress protein Ctc) gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=M479_269 M479_2690 M479_2690 mutS mutS 2969004 2971559 + DNA mismatch repair protein MutS mutS1: DNA mismatch repair protein MutS~[L] COG0249 Mismatch repair ATPase (MutS family) gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2690 M479_2691 M479_2691 rpoS rpoS 2971895 2972893 - RNA polymerase sigma factor RpoS rpoS_proteo: RNA polymerase sigma factor RpoS~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2691 M479_2692 M479_2692 M479_2692 2972948 2973931 - lysM domain protein [M] COG0739 Membrane proteins related to metalloendopeptidases gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2692 M479_2693 M479_2693 pcm pcm 2974053 2974679 - protein-L-isoaspartate O-methyltransferase pimt: protein-L-isoaspartate O-methyltransferase~[O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2693 M479_2694 M479_2694 surE surE 2974673 2975437 - 5'/3'-nucleotidase SurE surE: 5'/3'-nucleotidase SurE~[R] COG0496 Predicted acid phosphatase gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2694 M479_2695 M479_2695 M479_2695 2975415 2976464 - tRNA pseudouridine synthase%2C TruD family protein tRNA_TruD_broad: tRNA pseudouridine synthase%2C TruD family protein~[S] COG0585 Uncharacterized conserved protein gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2695 M479_2696 M479_2696 ispF ispF 2976475 2976963 - 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase [I] COG0245 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2696 M479_2697 M479_2697 ispD ispD 2977102 2977827 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~[I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2697 M479_2698 M479_2698 M479_2698 2977831 2978151 - septum formation initiator family protein [D] COG2919 Septum formation initiator gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2698 M479_2699 M479_2699 M479_2699 2978466 2978783 - hypothetical protein conserved hypothetical protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2699 M479_27 M479_27 cspE cspE 32748 32957 + RNA chaperone%2C negative regulator of cspA transcription [K] COG1278 Cold shock proteins gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=M479_27 M479_270 M479_270 M479_270 272632 274389 - DEAD/DEAH box helicase family protein [KL] COG1061 DNA or RNA helicases of superfamily II gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=M479_270 M479_2700 M479_2700 cysC cysC 2978974 2979678 - adenylyl-sulfate kinase apsK: adenylyl-sulfate kinase~[P] COG0529 Adenylylsulfate kinase and related kinases gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2700 M479_2701 M479_2701 cysN cysN 2979617 2981134 - sulfate adenylyltransferase%2C large subunit cysN: sulfate adenylyltransferase%2C large subunit~[P] COG2895 GTPases - Sulfate adenylate transferase subunit 1 gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2701 M479_2702 M479_2702 cysD cysD 2981146 2982054 - sulfate adenylyltransferase%2C small subunit cysD: sulfate adenylyltransferase%2C small subunit~[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2702 M479_2703 M479_2703 M479_2703 2982399 2983484 - hypothetical protein cysG_Nterm: siroheme synthase%2C N-terminal domain protein~[H] COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2703 M479_2704 M479_2704 M479_2704 2983785 2984051 - hypothetical protein gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2704 M479_2705 M479_2705 M479_2705 2984075 2984275 + ycfA-like family protein [N] COG1724 Predicted periplasmic or secreted lipoprotein gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2705 M479_2706 M479_2706 M479_2706 2984450 2984857 + hypothetical protein conserved hypothetical protein~[S] COG1598 Uncharacterized conserved protein gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2706 M479_2707 M479_2707 M479_2707 2984916 2985200 - phosphoadenosine phosphosulfate reductase family protein [EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2707 M479_2708 M479_2708 M479_2708 2985175 2985642 - phosphoadenosine phosphosulfate reductase family protein [EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2708 M479_2709 M479_2709 cysI cysI 2985639 2987369 - sulfite reductase (NADPH) hemoprotein%2C beta-component cysI: sulfite reductase (NADPH) hemoprotein%2C beta-component~[P] COG0155 Sulfite reductase%2C beta subunit (hemoprotein) gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2709 M479_271 M479_271 rsuA rsuA 274923 275630 + ribosomal small subunit pseudouridine synthase A [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=M479_271 M479_2710 M479_2710 M479_2710 2987369 2989207 - sulfite reductase [NADPH] flavoprotein%2C alpha-component cysJ: sulfite reductase [NADPH] flavoprotein%2C alpha-component~[P] COG0369 Sulfite reductase%2C alpha subunit (flavoprotein) gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2710 M479_2711 M479_2711 queD queD 2989600 2989959 + queuosine biosynthesis protein QueD queuosine_QueD: queuosine biosynthesis protein QueD~[H] COG0720 6-pyruvoyl-tetrahydropterin synthase gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2711 M479_2712 M479_2712 M479_2712 2990193 2990864 - putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE~[O] COG0602 Organic radical activating enzymes gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2712 M479_2713 M479_2713 sodC sodC 2990968 2991591 - superoxide dismutase [Cu-Zn] [P] COG2032 Cu/Zn superoxide dismutase gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2713 M479_2714 M479_2714 eno eno 2991963 2993258 - phosphopyruvate hydratase eno: phosphopyruvate hydratase~[G] COG0148 Enolase gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2714 M479_2715 M479_2715 pyrG pyrG 2993339 2994976 - CTP synthase pyrG: CTP synthase~[F] COG0504 CTP synthase (UTP-ammonia lyase) gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2715 M479_2716 M479_2716 M479_2716 2995188 2996030 - MazG family protein mazG: MazG family protein~[R] COG1694 Predicted pyrophosphatase gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2716 M479_2717 M479_2717 M479_2717 2996232 2998466 - RelA/SpoT family protein spoT_relA: RelA/SpoT family protein~[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2717 M479_2718 M479_2718 M479_2718 2998910 3001711 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2718 M479_2719 M479_2719 M479_2719 3001870 3003315 - peptidase Do family protein degP_htrA_DO: peptidase Do family protein~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2719 M479_272 M479_272 M479_272 275734 276933 + drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=M479_272 M479_2720 M479_2720 dgt dgt 3003513 3005033 - dGTPase family protein dGTP_triPase: dGTPase family protein~[F] COG0232 dGTP triphosphohydrolase gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2720 M479_2721 M479_2721 mtnN mtnN 3005327 3006028 + MTA/SAH nucleosidase MTA/SAH-Nsdase: MTA/SAH nucleosidase~[F] COG0775 Nucleoside phosphorylase gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2721 M479_2722 M479_2722 M479_2722 3006073 3006870 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2722 M479_2723 M479_2723 M479_2723 3006870 3007484 + hypothetical protein conserved hypothetical protein~[S] COG2860 Predicted membrane protein gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2723 M479_2724 M479_2724 erpA erpA 3007786 3008130 - iron-sulfur cluster insertion protein erpA [S] COG0316 Uncharacterized conserved protein gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2724 M479_2725 M479_2725 clcA clcA 3008266 3009702 - H(+)/Cl(-) exchange transporter ClcA [P] COG0038 Chloride channel protein EriC gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2725 M479_2726 M479_2726 hemL hemL 3010083 3011363 + glutamate-1-semialdehyde-2%2C1-aminomutase hemL: glutamate-1-semialdehyde-2%2C1-aminomutase~[H] COG0001 Glutamate-1-semialdehyde aminotransferase gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2726 M479_2727 M479_2727 fhuB fhuB 3011737 3013734 - iron(3+)-hydroxamate import system permease protein fhuB [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2727 M479_2728 M479_2728 M479_2728 3013731 3014819 - periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2728 M479_2729 M479_2729 M479_2729 3014819 3015613 - ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2729 M479_273 M479_273 M479_273 277918 278262 + yejG-like family protein gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=M479_273 M479_2730 M479_2730 mrcB mrcB 3015935 3018409 - penicillin-binding protein 1B PBP_1b: penicillin-binding protein 1B~[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein) gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2730 M479_2731 M479_2731 hrpB hrpB 3018518 3021007 - ATP-dependent helicase HrpB DEAH_box_HrpB: ATP-dependent helicase HrpB~[L] COG1643 HrpA-like helicases gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2731 M479_2732 M479_2732 M479_2732 3021120 3021695 + 2'-5' RNA ligase 2_5_ligase: 2'-5' RNA ligase~[J] COG1514 2'-5' RNA ligase gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2732 M479_2733 M479_2733 sfsA sfsA 3021808 3022545 + sugar fermentation stimulation protein sfsA: sugar fermentation stimulation protein~[R] COG1489 DNA-binding protein%2C stimulates sugar fermentation gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2733 M479_2734 M479_2734 dksA dksA 3022715 3023170 + RNA polymerase-binding protein DksA dksA: RNA polymerase-binding protein DksA~[T] COG1734 DnaK suppressor protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2734 M479_2735 M479_2735 gluQ gluQ 3023278 3024432 + glutamyl-queuosine tRNA(Asp) synthetase queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2735 M479_2736 M479_2736 pcnB pcnB 3024674 3025996 + poly(A) polymerase family protein pcnB: poly(A) polymerase family protein~[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2736 M479_2737 M479_2737 folK folK 3026004 3026483 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase~[H] COG0801 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2737 M479_2738 M479_2738 panB panB 3026752 3027549 + 3-methyl-2-oxobutanoate hydroxymethyltransferase panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase~[H] COG0413 Ketopantoate hydroxymethyltransferase gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2738 M479_2739 M479_2739 panC panC 3027637 3028491 + pantoate--beta-alanine ligase panC: pantoate--beta-alanine ligase~[H] COG0414 Panthothenate synthetase gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2739 M479_274 M479_274 nikE nikE 278323 279915 - nickel import ATP-binding protein NikE nickel_nikE: nickel import ATP-binding protein NikE~[R] COG4172 ABC-type uncharacterized transport system%2C duplicated ATPase component gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=M479_274 M479_2740 M479_2740 panD panD 3028902 3029282 + aspartate 1-decarboxylase panD: aspartate 1-decarboxylase~[H] COG0853 Aspartate 1-decarboxylase gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2740 M479_2741 M479_2741 M479_2741 3029431 3030426 - polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2741 M479_2742 M479_2742 M479_2742 3030407 3030745 - hypothetical protein conserved hypothetical protein~[G] COG0726 Predicted xylanase/chitin deacetylase gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2742 M479_2743 M479_2743 M479_2743 3030952 3031722 - ABC-2 type transporter family protein [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2743 M479_2744 M479_2744 M479_2744 3031719 3032645 - ABC transporter family protein [V] COG1131 ABC-type multidrug transport system%2C ATPase component gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2744 M479_2745 M479_2745 can can 3032881 3033543 + carbonic anhydrase 2 [P] COG0288 Carbonic anhydrase gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2745 M479_2746 M479_2746 hpt hpt 3033697 3034233 - hypoxanthine phosphoribosyltransferase HGPRTase: hypoxanthine phosphoribosyltransferase~[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2746 M479_2747 M479_2747 M479_2747 3034453 3036054 - multicopper oxidase family protein [Q] COG2132 Putative multicopper oxidases gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2747 M479_2748 M479_2748 M479_2748 3036392 3036718 + bacterial chaperone lipo family protein gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2748 M479_2749 M479_2749 speE speE 3036835 3037725 + spermidine synthase speE: spermidine synthase~[E] COG0421 Spermidine synthase gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2749 M479_275 M479_275 yejE yejE 279917 280942 - inner membrane ABC transporter permease protein yejE [R] COG4239 ABC-type uncharacterized transport system%2C permease component gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=M479_275 M479_2750 M479_2750 speD speD 3037803 3038597 + S-adenosylmethionine decarboxylase proenzyme SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme~[E] COG1586 S-adenosylmethionine decarboxylase gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2750 M479_2751 M479_2751 M479_2751 3039035 3039922 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2751 M479_2752 M479_2752 M479_2752 3040033 3040392 - hypothetical protein conserved hypothetical protein~[S] COG3112 Uncharacterized protein conserved in bacteria gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2752 M479_2753 M479_2753 acnB acnB 3040691 3043288 - aconitate hydratase 2 acnB: aconitate hydratase 2~[C] COG1049 Aconitase B gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2753 M479_2754 M479_2754 M479_2754 3043858 3044316 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2754 M479_2755 M479_2755 lpdA lpdA 3044559 3045983 - dihydrolipoyl dehydrogenase lipoamide_DH: dihydrolipoyl dehydrogenase~[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2755 M479_2756 M479_2756 aceF aceF 3046289 3047818 - dihydrolipoyllysine-residue acetyltransferase PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase~[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase (E2) component%2C and related enzymes gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2756 M479_2757 M479_2757 aceE aceE 3047832 3050495 - pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type aceE: pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type~[C] COG2609 Pyruvate dehydrogenase complex%2C dehydrogenase (E1) component gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2757 M479_2758 M479_2758 M479_2758 3050691 3051455 - bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2758 M479_2759 M479_2759 M479_2759 3052318 3053715 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2759 M479_276 M479_276 yejB yejB 280945 282045 - inner membrane ABC transporter permease protein yejB [R] COG4174 ABC-type uncharacterized transport system%2C permease component gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=M479_276 M479_2760 M479_2760 ampE ampE 3054148 3055002 - protein AmpE [V] COG3725 Membrane protein required for beta-lactamase induction gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2760 M479_2761 M479_2761 M479_2761 3055292 3055843 - N-acetylmuramoyl-L-alanine amidase family protein [V] COG3023 Negative regulator of beta-lactamase expression gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2761 M479_2762 M479_2762 nadC nadC 3055956 3056864 + nicotinate-nucleotide diphosphorylase nadC: nicotinate-nucleotide diphosphorylase~[H] COG0157 Nicotinate-nucleotide pyrophosphorylase gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2762 M479_2763 M479_2763 M479_2763 3057067 3057531 + hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG4969 Tfp pilus assembly protein%2C major pilin PilA gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2763 M479_2764 M479_2764 M479_2764 3057524 3059062 + type II/IV secretion system family protein [NU] COG2804 Type II secretory pathway%2C ATPase PulE/Tfp pilus assembly pathway%2C ATPase PilB gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2764 M479_2765 M479_2765 M479_2765 3059059 3060258 + type II secretion system (T2SS)%2C F family protein [NU] COG1459 Type II secretory pathway%2C component PulF gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2765 M479_2766 M479_2766 guaC guaC 3060653 3061696 - guanosine monophosphate reductase GMP_reduct_1: guanosine monophosphate reductase~[F] COG0516 IMP dehydrogenase/GMP reductase gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2766 M479_2767 M479_2767 coaE coaE 3061992 3062612 + dephospho-CoA kinase [H] COG0237 Dephospho-CoA kinase gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2767 M479_2768 M479_2768 M479_2768 3062609 3063361 + hypothetical protein conserved hypothetical protein~[S] COG4582 Uncharacterized protein conserved in bacteria gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2768 M479_2769 M479_2769 M479_2769 3063547 3063753 + hypothetical protein conserved hypothetical protein~[S] COG3024 Uncharacterized protein conserved in bacteria gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2769 M479_277 M479_277 M479_277 282055 283863 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=M479_277 M479_2770 M479_2770 M479_2770 3063943 3064401 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2770 M479_2771 M479_2771 M479_2771 3064512 3065534 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2771 M479_2772 M479_2772 M479_2772 3065534 3065746 + putative transposition helper domain protein [L] COG1484 DNA replication protein gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2772 M479_2773 M479_2773 M479_2773 3065725 3066312 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2773 M479_2774 M479_2774 M479_2774 3066574 3066960 - mutator mutT family protein mutt: mutator mutT family protein~[LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2774 M479_2775 M479_2775 secA secA 3067255 3069969 - preprotein translocase%2C SecA subunit secA: preprotein translocase%2C SecA subunit~[U] COG0653 Preprotein translocase subunit SecA (ATPase%2C RNA helicase) gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2775 M479_2776 M479_2776 M479_2776 3070047 3070580 - secretion monitor family protein gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2776 M479_2777 M479_2777 M479_2777 3070609 3071133 + hypothetical protein conserved hypothetical protein~[S] COG4701 Uncharacterized protein conserved in bacteria gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2777 M479_2778 M479_2778 lpxC lpxC 3071300 3072220 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~[M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2778 M479_2779 M479_2779 ftsZ ftsZ 3072320 3073471 - cell division protein FtsZ ftsZ: cell division protein FtsZ~[D] COG0206 Cell division GTPase gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2779 M479_278 M479_278 M479_278 283945 285318 - EAL domain protein [T] COG2200 FOG: EAL domain gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=M479_278 M479_2780 M479_2780 ftsA ftsA 3073544 3074800 - cell division protein FtsA ftsA: cell division protein FtsA~[D] COG0849 Actin-like ATPase involved in cell division gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2780 M479_2781 M479_2781 ftsQ ftsQ 3074827 3075654 - cell division protein FtsQ [M] COG1589 Cell division septal protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2781 M479_2782 M479_2782 M479_2782 3075656 3076576 - D-alanine--D-alanine ligase family protein D_ala_D_alaTIGR: D-alanine--D-alanine ligase family protein~[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2782 M479_2783 M479_2783 murC murC 3076569 3078044 - UDP-N-acetylmuramate--L-alanine ligase murC: UDP-N-acetylmuramate--L-alanine ligase~[M] COG0773 UDP-N-acetylmuramate-alanine ligase gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2783 M479_2784 M479_2784 murG murG 3078182 3079252 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~[M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2784 M479_2785 M479_2785 ftsW ftsW 3079249 3080451 - cell division protein FtsW ftsW: cell division protein FtsW~[D] COG0772 Bacterial cell division membrane protein gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2785 M479_2786 M479_2786 murD murD 3080451 3081767 - UDP-N-acetylmuramoylalanine--D-glutamate ligase murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase~[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2786 M479_2787 M479_2787 mraY mraY 3081770 3082852 - phospho-N-acetylmuramoyl-pentapeptide-transferase mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase~[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2787 M479_2788 M479_2788 murF murF 3082846 3084222 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein~[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2788 M479_2789 M479_2789 murE murE 3084219 3085706 - UDP-N-acetylmuramyl-tripeptide synthetase family protein murE: UDP-N-acetylmuramyl-tripeptide synthetase family protein~[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2789 M479_279 M479_279 rtn rtn 285392 285526 - rtn domain protein gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=M479_279 M479_2790 M479_2790 M479_2790 3085693 3087456 - penicillin binding transpeptidase domain protein [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2790 M479_2791 M479_2791 ftsL ftsL 3087522 3087839 - cell division protein FtsL ftsL_broad: cell division protein FtsL~[D] COG3116 Cell division protein gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2791 M479_2792 M479_2792 rsmH rsmH 3087836 3088792 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase [M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2792 M479_2793 M479_2793 M479_2793 3088795 3089253 - mraZ family protein [S] COG2001 Uncharacterized protein conserved in bacteria gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2793 M479_2794 M479_2794 M479_2794 3090355 3090795 + hypothetical protein conserved hypothetical protein gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2794 M479_2795 M479_2795 M479_2795 3090995 3091453 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2795 M479_2796 M479_2796 fruR fruR 3091637 3092647 - fructose repressor [K] COG1609 Transcriptional regulators gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2796 M479_2797 M479_2797 M479_2797 3093152 3093610 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2797 M479_2798 M479_2798 ilvN ilvN 3093809 3094303 - acetolactate synthase isozyme 1 small subunit acolac_sm: acetolactate synthase%2C small subunit~[E] COG0440 Acetolactate synthase%2C small (regulatory) subunit gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2798 M479_2799 M479_2799 ilvB ilvB 3094306 3096033 - acetolactate synthase%2C large subunit%2C biosynthetic type acolac_lg: acetolactate synthase%2C large subunit%2C biosynthetic type~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2799 M479_28 M479_28 crcB crcB 33380 33763 - protein CrcB [D] COG0239 Integral membrane protein possibly involved in chromosome condensation gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=M479_28 M479_280 M479_280 M479_280 286113 286697 - nlpC/P60 family protein [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=M479_280 M479_2800 M479_2800 M479_2800 3096533 3097741 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2800 M479_2801 M479_2801 M479_2801 3097816 3099621 - AMP-binding enzyme family protein [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2801 M479_2802 M479_2802 M479_2802 3100175 3101131 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2802 M479_2803 M479_2803 M479_2803 3101810 3102025 + hypothetical protein conserved hypothetical protein gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2803 M479_2804 M479_2804 leuA leuA 3102348 3103910 + 2-isopropylmalate synthase leuA_bact: 2-isopropylmalate synthase~[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2804 M479_2805 M479_2805 leuB leuB 3103913 3105004 + 3-isopropylmalate dehydrogenase leuB: 3-isopropylmalate dehydrogenase~[CE] COG0473 Isocitrate/isopropylmalate dehydrogenase gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2805 M479_2806 M479_2806 leuC leuC 3105006 3106436 + 3-isopropylmalate dehydratase%2C large subunit leuC: 3-isopropylmalate dehydratase%2C large subunit~[E] COG0065 3-isopropylmalate dehydratase large subunit gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2806 M479_2807 M479_2807 leuD leuD 3106451 3107053 + 3-isopropylmalate dehydratase%2C small subunit leuD: 3-isopropylmalate dehydratase%2C small subunit~[E] COG0066 3-isopropylmalate dehydratase small subunit gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2807 M479_2808 M479_2808 setA setA 3107294 3108475 - sugar efflux transporter A [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2808 M479_2809 M479_2809 M479_2809 3109139 3110800 + bacterial extracellular solute-binding s%2C 5 Middle family protein [R] COG4533 ABC-type uncharacterized transport system%2C periplasmic component gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2809 M479_281 M479_281 M479_281 287139 287840 - PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=M479_281 M479_2810 M479_2810 M479_2810 3110901 3111185 - putative membrane protein gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2810 M479_2811 M479_2811 thiB thiB 3111740 3112732 + thiamin/thiamine pyrophosphate ABC transporter%2C thiamin/thiamine pyrophospate-binding protein thiB: thiamin/thiamin pyrophosphate ABC transporter%2C thiamin/thiamin pyrophospate-binding protein~[H] COG4143 ABC-type thiamine transport system%2C periplasmic component gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2811 M479_2812 M479_2812 thiP thiP 3112708 3114315 + thiamine/thiamine pyrophosphate ABC transporter%2C permease protein thiP: thiamine/thiamine pyrophosphate ABC transporter%2C permease protein~[P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2812 M479_2813 M479_2813 thiQ thiQ 3114302 3115012 + thiamine ABC transporter%2C ATP-binding protein thiQ: thiamine ABC transporter%2C ATP-binding protein~[H] COG3840 ABC-type thiamine transport system%2C ATPase component gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2813 M479_2814 M479_2814 M479_2814 3115081 3115848 - hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2814 M479_2815 M479_2815 M479_2815 3116044 3118413 + DNA polymerase family B%2C exonuclease domain protein [L] COG0417 DNA polymerase elongation subunit (family B) gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2815 M479_2816 M479_2816 M479_2816 3118858 3121764 + DEAD/DEAH box helicase family protein [KL] COG0553 Superfamily II DNA/RNA helicases%2C SNF2 family gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2816 M479_2817 M479_2817 M479_2817 3122020 3122373 - hypothetical protein conserved hypothetical protein gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2817 M479_2818 M479_2818 M479_2818 3122395 3125889 - intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2818 M479_2819 M479_2819 M479_2819 3125898 3127487 - type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2819 M479_282 M479_282 M479_282 287899 288882 - cobW/HypB/UreG%2C nucleotide-binding domain protein [R] COG0523 Putative GTPases (G3E family) gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=M479_282 M479_2820 M479_2820 M479_2820 3127484 3128839 - hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2820 M479_2821 M479_2821 M479_2821 3128959 3129450 - type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2821 M479_2822 M479_2822 M479_2822 3129443 3129808 - hypothetical protein conserved hypothetical protein gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2822 M479_2823 M479_2823 M479_2823 3129814 3130431 - hypothetical protein conserved hypothetical protein gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2823 M479_2824 M479_2824 M479_2824 3130424 3131527 - pentapeptide repeats family protein [S] COG1357 Uncharacterized low-complexity proteins gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2824 M479_2825 M479_2825 M479_2825 3131553 3133772 - pentapeptide repeats family protein [S] COG1357 Uncharacterized low-complexity proteins gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2825 M479_2826 M479_2826 M479_2826 3133785 3136133 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2826 M479_2827 M479_2827 clpV clpV 3136237 3138825 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2827 M479_2828 M479_2828 M479_2828 3138843 3139826 - hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2828 M479_2829 M479_2829 M479_2829 3139819 3141663 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2829 M479_283 M479_283 M479_283 289198 289524 + putative membrane protein gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=M479_283 M479_2830 M479_2830 M479_2830 3141696 3142139 - lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2830 M479_2831 M479_2831 M479_2831 3142213 3142731 - hypothetical protein conserved hypothetical protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2831 M479_2832 M479_2832 M479_2832 3142894 3144396 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2832 M479_2833 M479_2833 M479_2833 3144405 3144965 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2833 M479_2834 M479_2834 M479_2834 3144976 3145962 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2834 M479_2835 M479_2835 M479_2835 3146319 3147062 + hypothetical protein conserved hypothetical protein~[S] COG5419 Uncharacterized conserved protein gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2835 M479_2836 M479_2836 M479_2836 3148285 3148905 + RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2836 M479_2837 M479_2837 djlA djlA 3149203 3150036 - dnaJ-like protein djlA [O] COG1076 DnaJ-domain-containing proteins 1 gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2837 M479_2838 M479_2838 M479_2838 3150311 3152563 + organic solvent tolerance family protein [M] COG1452 Organic solvent tolerance protein OstA gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2838 M479_2839 M479_2839 M479_2839 3152631 3153935 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2839 M479_284 M479_284 M479_284 289739 290419 + bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=M479_284 M479_2840 M479_2840 pdxA pdxA 3153919 3154914 + 4-hydroxythreonine-4-phosphate dehydrogenase PdxA pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA~[H] COG1995 Pyridoxal phosphate biosynthesis protein gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2840 M479_2841 M479_2841 rsmA rsmA 3154907 3155725 + ribosomal RNA small subunit methyltransferase A ksgA: ribosomal RNA small subunit methyltransferase A~[J] COG0030 Dimethyladenosine transferase (rRNA methylation) gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2841 M479_2842 M479_2842 M479_2842 3155739 3156116 + hypothetical protein conserved hypothetical protein~[P] COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2842 M479_2843 M479_2843 apaH apaH 3156133 3157002 + Diadenosine tetraphosphatase apaH: bis~[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases%3B bis gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2843 M479_2844 M479_2844 M479_2844 3157092 3157556 - hypothetical protein conserved hypothetical protein gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2844 M479_2845 M479_2845 folA folA 3158386 3158868 - dihydrofolate reductase [H] COG0262 Dihydrofolate reductase gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2845 M479_2846 M479_2846 M479_2846 3159018 3159473 - hypothetical protein conserved hypothetical protein~[S] COG3610 Uncharacterized conserved protein gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2846 M479_2847 M479_2847 M479_2847 3159470 3160270 - hypothetical protein conserved hypothetical protein~[S] COG2966 Uncharacterized conserved protein gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2847 M479_2848 M479_2848 M479_2848 3160594 3161208 + lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2848 M479_2849 M479_2849 carB carB 3161436 3164669 - carbamoyl-phosphate synthase%2C large subunit CPSaseII_lrg: carbamoyl-phosphate synthase%2C large subunit~[EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2849 M479_285 M479_285 M479_285 290563 292035 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=M479_285 M479_2850 M479_2850 carA carA 3164685 3165860 - carbamoyl-phosphate synthase%2C small subunit CPSaseIIsmall: carbamoyl-phosphate synthase%2C small subunit~[EF] COG0505 Carbamoylphosphate synthase small subunit gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2850 M479_2851 M479_2851 dapB dapB 3166333 3167154 - 4-hydroxy-tetrahydrodipicolinate reductase dapB: 4-hydroxy-tetrahydrodipicolinate reductase~[E] COG0289 Dihydrodipicolinate reductase gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2851 M479_2852 M479_2852 ispH ispH 3167736 3168689 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~[IM] COG0761 Penicillin tolerance protein gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2852 M479_2853 M479_2853 M479_2853 3168670 3169128 - FKBP-type peptidyl-prolyl cis-trans isomerase family protein [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2853 M479_2854 M479_2854 lspA lspA 3169196 3169705 - signal peptidase II lspA: signal peptidase II~[MU] COG0597 Lipoprotein signal peptidase gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2854 M479_2855 M479_2855 ileS ileS 3169705 3172521 - isoleucine--tRNA ligase ileS: isoleucine--tRNA ligase~[J] COG0060 Isoleucyl-tRNA synthetase gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2855 M479_2856 M479_2856 ribF ribF 3172553 3173491 - riboflavin biosynthesis protein RibF ribF: riboflavin biosynthesis protein RibF~[H] COG0196 FAD synthase gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2856 M479_2857 M479_2857 rpsT rpsT 3173906 3174169 + ribosomal protein S20 S20: ribosomal protein S20~[J] COG0268 Ribosomal protein S20 gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2857 M479_2858 M479_2858 M479_2858 3174300 3175193 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2858 M479_2859 M479_2859 nhaA nhaA 3175329 3176513 - Na+/H+ antiporter NhaA nhaA: Na+/H+ antiporter NhaA~[P] COG3004 Na+/H+ antiporter gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2859 M479_286 M479_286 uxuA uxuA 292620 293813 + mannonate dehydratase uxuA: mannonate dehydratase~[G] COG1312 D-mannonate dehydratase gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=M479_286 M479_2860 M479_2860 dnaJ dnaJ 3176756 3177895 - chaperone protein DnaJ dnaJ_bact: chaperone protein DnaJ~[O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2860 M479_2861 M479_2861 dnaK dnaK 3178007 3179917 - chaperone protein DnaK prok_dnaK: chaperone protein DnaK~[O] COG0443 Molecular chaperone gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2861 M479_2862 M479_2862 M479_2862 3180291 3180902 + GPR1/FUN34/yaaH family protein [S] COG1584 Predicted membrane protein gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2862 M479_2863 M479_2863 M479_2863 3181191 3183638 + beta/Gamma crystallin family protein gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2863 M479_2864 M479_2864 M479_2864 3183708 3185096 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2864 M479_2865 M479_2865 mog mog 3185224 3185811 - molybdopterin adenylyltransferase [H] COG0521 Molybdopterin biosynthesis enzymes gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2865 M479_2866 M479_2866 tal tal 3186099 3187052 - transaldolase talAB: transaldolase~[G] COG0176 Transaldolase gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2866 M479_2867 M479_2867 M479_2867 3187584 3188360 + hypothetical protein conserved hypothetical protein~[S] COG3022 Uncharacterized protein conserved in bacteria gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2867 M479_2868 M479_2868 M479_2868 3188792 3188902 - hypothetical protein conserved hypothetical protein gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2868 M479_2869 M479_2869 thrC thrC 3189177 3190466 - threonine synthase thrC: threonine synthase~[E] COG0498 Threonine synthase gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2869 M479_287 M479_287 yeiP yeiP 293953 294525 - elongation factor P-like protein [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=M479_287 M479_2870 M479_2870 thrB thrB 3190470 3191399 - homoserine kinase thrB: homoserine kinase~[E] COG0083 Homoserine kinase gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2870 M479_2871 M479_2871 M479_2871 3191402 3193861 - aspartate kinase domain protein asp_kinase: aspartate kinase domain protein~[E] COG0460 Homoserine dehydrogenase gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2871 M479_2872 M479_2872 M479_2872 3194300 3194407 - hypothetical protein conserved hypothetical protein gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2872 M479_2873 M479_2873 M479_2873 3194965 3195681 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2873 M479_2874 M479_2874 M479_2874 3195855 3196322 - creA family protein [S] COG3045 Uncharacterized protein conserved in bacteria gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2874 M479_2875 M479_2875 M479_2875 3196319 3196504 - hypothetical protein conserved hypothetical protein gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2875 M479_2876 M479_2876 M479_2876 3197411 3198058 - histidine phosphatase super family protein [G] COG0406 Fructose-2%2C6-bisphosphatase gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2876 M479_2877 M479_2877 M479_2877 3196548 3197414 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2877 M479_2878 M479_2878 trpR trpR 3198691 3199083 - trp operon repressor trpR: trp operon repressor~[K] COG2973 Trp operon repressor gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2878 M479_2879 M479_2879 M479_2879 3198152 3198694 + hypothetical protein conserved hypothetical protein~[S] COG1986 Uncharacterized conserved protein gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2879 M479_288 M479_288 M479_288 294629 295873 - aromatic amino acid transport family protein araaP: aromatic amino acid transport family protein~[E] COG0814 Amino acid permeases gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=M479_288 M479_2880 M479_2880 M479_2880 3199319 3201238 - soluble lytic murein transglycosylase L domain protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2880 M479_2881 M479_2881 M479_2881 3201808 3204534 + HAD ATPase%2C P-type%2C IC family protein ATPase_P-type: HAD ATPase%2C P-type%2C IC family protein~[P] COG0474 Cation transport ATPase gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2881 M479_2882 M479_2882 M479_2882 3204909 3205532 + hypothetical protein conserved hypothetical protein gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2882 M479_2883 M479_2883 M479_2883 3205553 3206830 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2883 M479_2884 M479_2884 M479_2884 3206836 3207342 + ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2884 M479_2885 M479_2885 ccmA ccmA 3207525 3209192 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2885 M479_2886 M479_2886 M479_2886 3209338 3209793 - hypothetical protein conserved hypothetical protein~[S] COG3177 Uncharacterized conserved protein gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2886 M479_2887 M479_2887 M479_2887 3209739 3210377 - hypothetical protein conserved hypothetical protein~[S] COG3177 Uncharacterized conserved protein gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2887 M479_2888 M479_2888 nadR nadR 3210534 3211805 - trifunctional NAD biosynthesis/regulator protein NadR [H] COG3172 Predicted ATPase/kinase involved in NAD metabolism gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2888 M479_2889 M479_2889 radA radA 3211964 3213346 - DNA repair protein RadA sms: DNA repair protein RadA~[O] COG1066 Predicted ATP-dependent serine protease gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2889 M479_289 M479_289 M479_289 296248 296502 + putative zinc-/iron-chelating domain protein [R] COG0727 Predicted Fe-S-cluster oxidoreductase gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=M479_289 M479_2890 M479_2890 serB serB 3213434 3214414 - phosphoserine phosphatase SerB serB: phosphoserine phosphatase SerB~[E] COG0560 Phosphoserine phosphatase gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2890 M479_2891 M479_2891 M479_2891 3214646 3215347 + bacterial virulence factor hemolysin family protein [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2891 M479_2892 M479_2892 deoD deoD 3215459 3216178 - purine nucleoside phosphorylase deoD: purine nucleoside phosphorylase~[F] COG0813 Purine-nucleoside phosphorylase gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2892 M479_2893 M479_2893 deoB deoB 3216303 3217526 - phosphopentomutase deoB: phosphopentomutase~[G] COG1015 Phosphopentomutase gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2893 M479_2894 M479_2894 deoA deoA 3217658 3218980 - thymidine phosphorylase T_phosphoryl: thymidine phosphorylase~[F] COG0213 Thymidine phosphorylase gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2894 M479_2895 M479_2895 deoC deoC 3219101 3219898 - deoxyribose-phosphate aldolase deoC: deoxyribose-phosphate aldolase~[F] COG0274 Deoxyribose-phosphate aldolase gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2895 M479_2896 M479_2896 M479_2896 3220482 3221138 - na+ dependent nucleoside transporter family protein [F] COG1972 Nucleoside permease gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2896 M479_2897 M479_2897 M479_2897 3221092 3221754 - nucleoside recognition family protein [F] COG1972 Nucleoside permease gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2897 M479_2898 M479_2898 M479_2898 3222289 3223077 - hypothetical protein conserved hypothetical protein~[L] COG0084 Mg-dependent DNase gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2898 M479_2899 M479_2899 M479_2899 3223114 3224382 - patatin-like phospholipase family protein [R] COG4667 Predicted esterase of the alpha-beta hydrolase superfamily gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2899 M479_29 M479_29 tatA tatA 34330 34587 + twin arginine-targeting translocase%2C TatA/E family protein tatAE: twin arginine-targeting translocase%2C TatA/E family protein~[U] COG1826 Sec-independent protein secretion pathway components gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=M479_29 M479_290 M479_290 M479_290 296571 297386 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=M479_290 M479_2900 M479_2900 M479_2900 3224459 3224620 - hypothetical protein conserved hypothetical protein~[S] COG5487 Small integral membrane protein gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2900 M479_2901 M479_2901 M479_2901 3224787 3225401 - BON domain protein [R] COG2823 Predicted periplasmic or secreted lipoprotein gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2901 M479_2902 M479_2902 prfC prfC 3225728 3227317 - peptide chain release factor 3 prfC: peptide chain release factor 3~[J] COG4108 Peptide chain release factor RF-3 gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2902 M479_2903 M479_2903 rimI rimI 3227496 3227939 - ribosomal-protein-alanine acetyltransferase rimI: ribosomal-protein-alanine acetyltransferase~[R] COG0456 Acetyltransferases gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2903 M479_2904 M479_2904 M479_2904 3227884 3228321 - DNA polymerase III psi subunit [L] COG3050 DNA polymerase III%2C psi subunit gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2904 M479_2905 M479_2905 M479_2905 3228434 3229477 + methyltransferase small domain protein [J] COG2813 16S RNA G1207 methylase RsmC gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2905 M479_2906 M479_2906 M479_2906 3229734 3229820 + tRNA-Leu tRNA gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2906 M479_2907 M479_2907 M479_2907 3229990 3230322 - hypothetical protein conserved hypothetical protein gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2907 M479_2908 M479_2908 M479_2908 3230589 3231743 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2908 M479_2909 M479_2909 pemA pemA 3232284 3233369 - pectinesterase A [G] COG4677 Pectin methylesterase gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2909 M479_291 M479_291 M479_291 297397 298347 - D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=M479_291 M479_2910 M479_2910 M479_2910 3234172 3234504 + hypothetical protein conserved hypothetical protein gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2910 M479_2911 M479_2911 M479_2911 3234865 3237951 - acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2911 M479_2912 M479_2912 M479_2912 3237951 3239033 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2912 M479_2913 M479_2913 M479_2913 3239085 3239318 - hypothetical protein conserved hypothetical protein gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2913 M479_2914 M479_2914 M479_2914 3240128 3241360 - O-Antigen ligase family protein [M] COG3307 Lipid A core - O-antigen ligase and related enzymes gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2914 M479_2915 M479_2915 rfaQ rfaQ 3241408 3242571 - putative lipopolysaccharide heptosyltransferase III heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III~[M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2915 M479_2916 M479_2916 lsrK lsrK 3242917 3244509 - autoinducer 2 kinase LsrK [G] COG1070 Sugar (pentulose and hexulose) kinases gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2916 M479_2917 M479_2917 lsrR lsrR 3244680 3245675 - transcriptional regulator lsrR [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2917 M479_2918 M479_2918 ccmA ccmA 3246003 3247586 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2918 M479_2919 M479_2919 M479_2919 3247580 3248635 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2919 M479_292 M479_292 M479_292 298359 299501 - fumarylacetoacetate (FAA) hydrolase family protein [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family protein gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=M479_292 M479_2920 M479_2920 M479_2920 3248632 3249633 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2920 M479_2921 M479_2921 lsrB lsrB 3249713 3250732 + autoinducer 2-binding protein lsrB [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2921 M479_2922 M479_2922 M479_2922 3250788 3251663 + hypothetical protein conserved hypothetical protein~[G] COG1830 DhnA-type fructose-1%2C6-bisphosphate aldolase and related enzymes gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2922 M479_2923 M479_2923 lsrG lsrG 3251727 3252017 + autoinducer 2-degrading protein lsrG [S] COG1359 Uncharacterized conserved protein gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2923 M479_2924 M479_2924 M479_2924 3252340 3252831 + hypothetical protein conserved hypothetical protein gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2924 M479_2925 M479_2925 ptsP ptsP 3252893 3255451 - phosphoenolpyruvate-protein phosphotransferase PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase~[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2925 M479_2926 M479_2926 M479_2926 3255816 3256898 + PTS system%2C Fru family%2C IIC component domain protein PTS_IIC_fructo: PTS system%2C Fru family%2C IIC component domain protein~[G] COG1299 Phosphotransferase system%2C fructose-specific IIC component gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2926 M479_2927 M479_2927 frwB frwB 3257239 3257559 + fructose-like phosphotransferase enzyme IIB component 2 [G] COG1445 Phosphotransferase system fructose-specific component IIB gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2927 M479_2928 M479_2928 M479_2928 3257989 3258864 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2928 M479_2929 M479_2929 M479_2929 3257652 3257996 + PTS system%2C Fru family%2C IIB component domain protein FRU: PTS system%2C Fru family%2C IIB component domain protein~[G] COG1445 Phosphotransferase system fructose-specific component IIB gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2929 M479_293 M479_293 M479_293 299852 301336 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=M479_293 M479_2930 M479_2930 M479_2930 3258866 3259402 - hypothetical protein conserved hypothetical protein gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2930 M479_2931 M479_2931 M479_2931 3260130 3261326 + hypothetical protein conserved hypothetical protein~[S] COG4269 Predicted membrane protein gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2931 M479_2932 M479_2932 M479_2932 3261337 3262383 + peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2932 M479_2933 M479_2933 M479_2933 3262529 3263683 - hypothetical protein conserved hypothetical protein~[S] COG4924 Uncharacterized protein conserved in bacteria gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2933 M479_2934 M479_2934 M479_2934 3263680 3265029 - exonuclease SbcCD%2C C subunit [S] COG4913 Uncharacterized protein conserved in bacteria gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2934 M479_2935 M479_2935 M479_2935 3265174 3265269 - hypothetical protein [S] COG4913 Uncharacterized protein conserved in bacteria gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2935 M479_2936 M479_2936 M479_2936 3265310 3265507 + type VI secretion%2C family domain protein type VI secretion%2C VC_A0111 family domain protein gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2936 M479_2937 M479_2937 M479_2937 3265709 3265996 + hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2937 M479_2938 M479_2938 M479_2938 3266344 3267162 - hypothetical protein conserved hypothetical protein gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2938 M479_2939 M479_2939 M479_2939 3267689 3268411 - histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2939 M479_294 M479_294 xylB xylB 301340 302893 + xylulokinase xylB: xylulokinase~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=M479_294 M479_2940 M479_2940 M479_2940 3268461 3269786 - DNA methylase family protein [L] COG0863 DNA modification methylase gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2940 M479_2941 M479_2941 M479_2941 3269925 3270188 + transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2941 M479_2942 M479_2942 M479_2942 3270810 3272126 - mcrBC 5-methylcytosine restriction system component family protein [V] COG4268 McrBC 5-methylcytosine restriction system component gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2942 M479_2943 M479_2943 M479_2943 3272123 3274186 - AAA domain family protein [V] COG1401 GTPase subunit of restriction endonuclease gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2943 M479_2944 M479_2944 M479_2944 3274320 3275342 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2944 M479_2945 M479_2945 M479_2945 3275342 3276121 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2945 M479_2946 M479_2946 M479_2946 3276172 3277281 - histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2946 M479_2947 M479_2947 M479_2947 3277274 3279148 - hypothetical protein conserved hypothetical protein~[S] COG1479 Uncharacterized conserved protein gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2947 M479_2948 M479_2948 M479_2948 3279338 3280597 - phage integrase family protein [L] COG0582 Integrase gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2948 M479_2949 M479_2949 M479_2949 3280796 3280880 - tRNA-Leu tRNA gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2949 M479_295 M479_295 rpiA rpiA 302913 303623 + ribose 5-phosphate isomerase A rpiA: ribose 5-phosphate isomerase A~[G] COG0120 Ribose 5-phosphate isomerase gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=M479_295 M479_2950 M479_2950 lptG lptG 3280985 3282061 - LPS export ABC transporter permease LptG lptG_lptG: LPS export ABC transporter permease LptG~[R] COG0795 Predicted permeases gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2950 M479_2951 M479_2951 lptF lptF 3282061 3283155 - LPS export ABC transporter permease LptF lptF_YjgP: LPS export ABC transporter permease LptF~[R] COG0795 Predicted permeases gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2951 M479_2952 M479_2952 M479_2952 3283435 3284946 + hypothetical protein cytosol aminopeptidase family%2C N-terminal domain protein~[E] COG0260 Leucyl aminopeptidase gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2952 M479_2953 M479_2953 M479_2953 3285097 3285546 + DNA polymerase III chi subunit%2C HolC family protein [L] COG2927 DNA polymerase III%2C chi subunit gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2953 M479_2954 M479_2954 valS valS 3285559 3288456 + valine--tRNA ligase valS: valine--tRNA ligase~[J] COG0525 Valyl-tRNA synthetase gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2954 M479_2955 M479_2955 M479_2955 3288599 3289102 + acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2955 M479_2956 M479_2956 rraB rraB 3289460 3289891 - regulator of ribonuclease activity B [S] COG3076 Uncharacterized protein conserved in bacteria gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2956 M479_2957 M479_2957 argF argF 3290103 3291110 + ornithine carbamoyltransferase orni_carb_tr: ornithine carbamoyltransferase~[E] COG0078 Ornithine carbamoyltransferase gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2957 M479_2958 M479_2958 M479_2958 3291417 3291875 - hypothetical protein conserved hypothetical protein~[G] COG2731 Beta-galactosidase%2C beta subunit gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2958 M479_2959 M479_2959 M479_2959 3292514 3293686 + bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2959 M479_296 M479_296 M479_296 303731 304819 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=M479_296 M479_2960 M479_2960 M479_2960 3293695 3294081 + putative dipeptide-binding protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2960 M479_2961 M479_2961 M479_2961 3294177 3295226 + binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2961 M479_2962 M479_2962 M479_2962 3295245 3296081 + binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2962 M479_2963 M479_2963 M479_2963 3296074 3296952 + ABC transporter family protein [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2963 M479_2964 M479_2964 M479_2964 3296939 3297655 + ABC transporter family protein [EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2964 M479_2965 M479_2965 nrdD nrdD 3298089 3300227 + anaerobic ribonucleoside-triphosphate reductase nrdD: anaerobic ribonucleoside-triphosphate reductase~[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2965 M479_2966 M479_2966 M479_2966 3300554 3300868 + 4Fe-4S single cluster domain protein [O] COG0602 Organic radical activating enzymes gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2966 M479_2967 M479_2967 M479_2967 3300882 3301016 - hypothetical protein conserved hypothetical protein gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2967 M479_2968 M479_2968 phnF phnF 3301196 3301921 + phosphonate metabolism transcriptional regulator PhnF C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF~[K] COG2188 Transcriptional regulators gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2968 M479_2969 M479_2969 phnG phnG 3301922 3302398 + phosphonate C-P lyase system protein PhnG phnG_redo: phosphonate C-P lyase system protein PhnG~[P] COG3624 Uncharacterized enzyme of phosphonate metabolism gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2969 M479_297 M479_297 M479_297 304928 306502 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=M479_297 M479_2970 M479_2970 phnH phnH 3302398 3303024 + phosphonate C-P lyase system protein PhnH phnH_redo: phosphonate C-P lyase system protein PhnH~[P] COG3625 Uncharacterized enzyme of phosphonate metabolism gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2970 M479_2971 M479_2971 M479_2971 3303024 3304202 + bacterial phosphonate metabolism family protein [P] COG3626 Uncharacterized enzyme of phosphonate metabolism gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2971 M479_2972 M479_2972 M479_2972 3304195 3305076 + phosphonate metabolism PhnJ family protein [P] COG3627 Uncharacterized enzyme of phosphonate metabolism gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2972 M479_2973 M479_2973 phnK phnK 3305076 3305867 + phosphonate C-P lyase system protein PhnK CP_lyasePhnK: phosphonate C-P lyase system protein PhnK~[P] COG4107 ABC-type phosphonate transport system%2C ATPase component gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2973 M479_2974 M479_2974 phnL phnL 3306256 3306975 + phosphonate C-P lyase system protein PhnL CP_lyasePhnL: phosphonate C-P lyase system protein PhnL~[P] COG4778 ABC-type phosphonate transport system%2C ATPase component gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2974 M479_2975 M479_2975 phnM phnM 3306972 3308108 + phosphonate metabolism protein PhnM phosphono_phnM: phosphonate metabolism protein PhnM~[P] COG3454 Metal-dependent hydrolase involved in phosphonate metabolism gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2975 M479_2976 M479_2976 phnN phnN 3308108 3308689 + phosphonate metabolism protein/1%2C5-bisphosphokinase (PRPP-forming) PhnN phosphon_PhnN: phosphonate metabolism protein/1%2C5-bisphosphokinase (PRPP-forming) PhnN~[P] COG3709 Uncharacterized component of phosphonate metabolism gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2976 M479_2977 M479_2977 phnP phnP 3308680 3309432 + phosphonate metabolism protein PhnP phnP: phosphonate metabolism protein PhnP~[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2977 M479_2978 M479_2978 M479_2978 3309445 3310083 - semialdehyde dehydrogenase%2C NAD binding domain protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2978 M479_2979 M479_2979 M479_2979 3310235 3310678 - hypothetical protein putative uPF0306 protein YPO3467/y0717/YP_0616~[S] COG3787 Uncharacterized protein conserved in bacteria gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2979 M479_298 M479_298 M479_298 306538 307536 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=M479_298 M479_2980 M479_2980 M479_2980 3310762 3311928 - alginate lyase family protein gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2980 M479_2981 M479_2981 M479_2981 3311943 3313037 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2981 M479_2982 M479_2982 M479_2982 3313049 3313888 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2982 M479_2983 M479_2983 M479_2983 3313907 3314791 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2983 M479_2984 M479_2984 M479_2984 3314799 3316094 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2984 M479_2985 M479_2985 M479_2985 3316676 3317896 + alginate lyase family protein gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2985 M479_2986 M479_2986 M479_2986 3317920 3319938 + alginate lyase family protein gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2986 M479_2987 M479_2987 M479_2987 3320169 3320456 + GIY-YIG catalytic domain protein [L] COG2827 Predicted endonuclease containing a URI domain gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2987 M479_2988 M479_2988 M479_2988 3320631 3321134 - acetyltransferase family protein [R] COG3153 Predicted acetyltransferase gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2988 M479_2989 M479_2989 M479_2989 3321131 3321652 - hypothetical protein alkyl sulfatase C-terminal family protein~[I] COG3154 Putative lipid carrier protein gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2989 M479_299 M479_299 M479_299 307649 308104 - NUDIX domain protein [F] COG1051 ADP-ribose pyrophosphatase gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=M479_299 M479_2990 M479_2990 M479_2990 3321968 3322963 + hypothetical protein conserved hypothetical protein~[O] COG0826 Collagenase and related proteases gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2990 M479_2991 M479_2991 M479_2991 3322975 3323853 + peptidase U32 family protein [O] COG0826 Collagenase and related proteases gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2991 M479_2992 M479_2992 M479_2992 3323994 3325400 - efflux transporter%2C outer membrane factor (OMF) lipo%2C NodT family protein outer_NodT: efflux transporter%2C outer membrane factor (OMF) lipo%2C NodT family protein~[MU] COG1538 Outer membrane protein gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2992 M479_2993 M479_2993 M479_2993 3325402 3328527 - RND transporter%2C hydrophobe/amphiphile efflux-1 family protein 2A0602: RND transporter%2C hydrophobe/amphiphile efflux-1 family protein~[V] COG0841 Cation/multidrug efflux pump gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2993 M479_2994 M479_2994 M479_2994 3328531 3329661 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2994 M479_2995 M479_2995 M479_2995 3331219 3331509 - hypothetical protein conserved hypothetical protein gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2995 M479_2996 M479_2996 M479_2996 3330199 3331254 + luciferase oxidoreductase%2C group 1 family protein oxido_grp_1: luciferase oxidoreductase%2C group 1 family protein~[C] COG2141 Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2996 M479_2997 M479_2997 M479_2997 3331509 3331820 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2997 M479_2998 M479_2998 M479_2998 3331844 3332212 - hypothetical protein conserved hypothetical protein~[S] COG4679 Phage-related protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2998 M479_2999 M479_2999 M479_2999 3332448 3334442 - DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=M479_2999 M479_3 M479_3 M479_3 3593 9571 - MG2 domain protein [R] COG2373 Large extracellular alpha-helical protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3 M479_30 M479_30 lipA lipA 34768 35733 - lipoyl synthase lipA: lipoyl synthase~[H] COG0320 Lipoate synthase gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=M479_30 M479_300 M479_300 M479_300 308366 309499 + phosphocarrier%2C HPr family protein PTS_HPr_: phosphocarrier%2C HPr family protein~[G] COG4668 Mannitol/fructose-specific phosphotransferase system%2C IIA domain gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=M479_300 M479_3000 M479_3000 M479_3000 3334629 3335513 - tetratricopeptide repeat family protein [R] COG4785 Lipoprotein NlpI%2C contains TPR repeats gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3000 M479_3001 M479_3001 pnp pnp 3335638 3337755 - polyribonucleotide nucleotidyltransferase polynuc_phos: polyribonucleotide nucleotidyltransferase~[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3001 M479_3002 M479_3002 M479_3002 3338046 3338561 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3002 M479_3003 M479_3003 M479_3003 3338615 3339400 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3003 M479_3004 M479_3004 M479_3004 3340189 3340653 - hypothetical protein conserved hypothetical protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3004 M479_3005 M479_3005 M479_3005 3340962 3341336 - putative membrane protein gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3005 M479_3006 M479_3006 M479_3006 3341735 3343249 + FAD dependent oxidoreductase family protein [C] COG0578 Glycerol-3-phosphate dehydrogenase gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3006 M479_3007 M479_3007 glgP glgP 3343412 3345859 - glycogen/starch/alpha-glucan phosphorylases family protein P_ylase: glycogen/starch/alpha-glucan phosphorylases family protein~[G] COG0058 Glucan phosphorylase gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3007 M479_3008 M479_3008 glgA glgA 3346028 3347458 - glycogen/starch synthase%2C ADP-glucose type family protein glgA: glycogen/starch synthase%2C ADP-glucose type family protein~[G] COG0297 Glycogen synthase gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3008 M479_3009 M479_3009 glgC glgC 3347526 3348956 - glucose-1-phosphate adenylyltransferase glgC: glucose-1-phosphate adenylyltransferase~[G] COG0448 ADP-glucose pyrophosphorylase gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3009 M479_301 M479_301 pfkB pfkB 309496 310434 + 1-phosphofructokinase pfkB: 1-phosphofructokinase~[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=M479_301 M479_3010 M479_3010 glgX glgX 3348966 3350954 - glycogen debranching enzyme GlgX glgX_debranch: glycogen debranching enzyme GlgX~[G] COG1523 Type II secretory pathway%2C pullulanase PulA and related glycosidases gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3010 M479_3011 M479_3011 glgB glgB 3350956 3353139 - 1%2C4-alpha-glucan branching enzyme branching_enzym: 1%2C4-alpha-glucan branching enzyme~[G] COG0296 1%2C4-alpha-glucan branching enzyme gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3011 M479_3012 M479_3012 M479_3012 3353645 3355342 + histidine kinase family protein [T] COG3275 Putative regulator of cell autolysis gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3012 M479_3013 M479_3013 M479_3013 3355550 3365170 - bacterial Ig-like domain family protein gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3013 M479_3014 M479_3014 M479_3014 3366605 3366748 - hypothetical protein conserved hypothetical protein gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3014 M479_3015 M479_3015 M479_3015 3366906 3367193 - hypothetical protein conserved hypothetical protein gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3015 M479_3016 M479_3016 M479_3016 3367200 3367508 - hypothetical protein conserved hypothetical protein gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3016 M479_3017 M479_3017 M479_3017 3367815 3368096 - hypothetical protein conserved hypothetical protein gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3017 M479_3018 M479_3018 asd asd 3368265 3369368 - aspartate-semialdehyde dehydrogenase asd_gamma: aspartate-semialdehyde dehydrogenase~[E] COG0136 Aspartate-semialdehyde dehydrogenase gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3018 M479_3019 M479_3019 M479_3019 3369726 3370319 + hypothetical protein conserved hypothetical protein~[U] COG2095 Multiple antibiotic transporter gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3019 M479_302 M479_302 M479_302 310449 312149 + PTS system%2C Fru family%2C IIB component domain protein FRU: PTS system%2C Fru family%2C IIB component domain protein~[G] COG1299 Phosphotransferase system%2C fructose-specific IIC component gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=M479_302 M479_3020 M479_3020 M479_3020 3370559 3370948 - hypothetical protein conserved hypothetical protein gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3020 M479_3021 M479_3021 M479_3021 3371003 3371143 - hypothetical protein conserved hypothetical protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3021 M479_3022 M479_3022 M479_3022 3371334 3371567 - hypothetical protein conserved hypothetical protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3022 M479_3023 M479_3023 M479_3023 3371749 3372252 - carbohydrate kinase%2C thermoresistant glucokinase family protein therm_gnt_kin: carbohydrate kinase%2C thermoresistant glucokinase family protein~[G] COG3265 Gluconate kinase gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3023 M479_3024 M479_3024 M479_3024 3372469 3373785 + transporter%2C gluconate:H+ symporter family protein gntP: transporter%2C gluconate:H+ symporter family protein~[GE] COG2610 H+/gluconate symporter and related permeases gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3024 M479_3025 M479_3025 M479_3025 3373877 3374611 - periplasmic binding domain protein [K] COG1609 Transcriptional regulators gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3025 M479_3026 M479_3026 M479_3026 3374617 3374871 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3026 M479_3027 M479_3027 M479_3027 3375000 3375695 - pirin family protein [R] COG1741 Pirin-related protein gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3027 M479_3028 M479_3028 M479_3028 3375824 3376036 - hypothetical protein conserved hypothetical protein gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3028 M479_3029 M479_3029 M479_3029 3376459 3377196 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3029 M479_303 M479_303 M479_303 312474 313118 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=M479_303 M479_3030 M479_3030 M479_3030 3377365 3378372 - pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3030 M479_3031 M479_3031 M479_3031 3378382 3379242 - ketose-bisphosphate aldolase family protein cbbA: ketose-bisphosphate aldolase family protein~[G] COG0191 Fructose/tagatose bisphosphate aldolase gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3031 M479_3032 M479_3032 M479_3032 3379268 3379951 - hypothetical protein conserved hypothetical protein~[R] COG3822 ABC-type sugar transport system%2C auxiliary component gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3032 M479_3033 M479_3033 M479_3033 3380026 3380970 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3033 M479_3034 M479_3034 M479_3034 3381001 3381993 - branched-chain amino acid transport system / permease component family protein [R] COG4158 Predicted ABC-type sugar transport system%2C permease component gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3034 M479_3035 M479_3035 M479_3035 3381986 3383509 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3035 M479_3036 M479_3036 M479_3036 3383698 3386253 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3036 M479_3037 M479_3037 M479_3037 3386389 3387585 - flavo%2C family protein flavo%2C HI0933 family protein~[R] COG2081 Predicted flavoproteins gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3037 M479_3038 M479_3038 M479_3038 3387896 3389392 + phosphate transporter family protein [P] COG0306 Phosphate/sulphate permeases gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3038 M479_3039 M479_3039 M479_3039 3389658 3390116 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3039 M479_304 M479_304 M479_304 313115 313603 + putative protein psaF gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=M479_304 M479_3040 M479_3040 uspB uspB 3390249 3390584 - universal stress protein B gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3040 M479_3041 M479_3041 uspA uspA 3391292 3391738 + universal stress protein A [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3041 M479_3042 M479_3042 M479_3042 3391985 3393328 + glu/Leu/Phe/Val dehydrogenase%2C dimerization domain protein [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3042 M479_3043 M479_3043 prtA prtA 3393576 3394910 + secreted protease A [Q] COG2931 RTX toxins and related Ca2+-binding proteins gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3043 M479_3044 M479_3044 M479_3044 3394975 3395745 - SAM-dependent methyltransferase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3044 M479_3045 M479_3045 M479_3045 3395749 3397791 - peptidase M3 family protein [E] COG0339 Zn-dependent oligopeptidases gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3045 M479_3046 M479_3046 M479_3046 3398120 3398962 + ribosomal RNA small subunit methyltransferase D%2C RsmJ family protein [R] COG2961 Protein involved in catabolism of external DNA gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3046 M479_3047 M479_3047 gor gor 3399112 3400464 + glutathione-disulfide reductase gluta_reduc_1: glutathione-disulfide reductase~[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3047 M479_3048 M479_3048 M479_3048 3400657 3401784 + sugar diacid recognition family protein [KT] COG3835 Sugar diacid utilization regulator gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3048 M479_3049 M479_3049 M479_3049 3401962 3403230 + citrate transporter family protein [GE] COG2610 H+/gluconate symporter and related permeases gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3049 M479_305 M479_305 myfA myfA 314148 314624 + fimbrial protein myfA gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=M479_305 M479_3050 M479_3050 M479_3050 3403241 3404377 + glycerate kinase family protein [G] COG1929 Glycerate kinase gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3050 M479_3051 M479_3051 M479_3051 3404623 3405129 - hypothetical protein conserved hypothetical protein gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3051 M479_3052 M479_3052 M479_3052 3405197 3405694 - hypothetical protein conserved hypothetical protein gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3052 M479_3053 M479_3053 M479_3053 3405696 3406550 - hypothetical protein conserved hypothetical family protein gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3053 M479_3054 M479_3054 M479_3054 3406653 3409865 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3054 M479_3055 M479_3055 yhjD yhjD 3410543 3411625 + inner membrane protein YhjD [S] COG1295 Predicted membrane protein gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3055 M479_3056 M479_3056 M479_3056 3411629 3412426 + CDP-diacylglycerol pyrophosphatase family protein [I] COG2134 CDP-diacylglycerol pyrophosphatase gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3056 M479_3057 M479_3057 M479_3057 3412431 3414620 - asmA family protein [M] COG2982 Uncharacterized protein involved in outer membrane biogenesis gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3057 M479_3058 M479_3058 M479_3058 3414925 3415770 - EAL domain protein [T] COG2200 FOG: EAL domain gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3058 M479_3059 M479_3059 dmpI dmpI 3415989 3416189 + 4-oxalocrotonate tautomerase enzyme family protein taut: 4-oxalocrotonate tautomerase enzyme family protein~[R] COG1942 Uncharacterized protein%2C 4-oxalocrotonate tautomerase homolog gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3059 M479_306 M479_306 M479_306 314946 315572 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=M479_306 M479_3060 M479_3060 M479_3060 3416468 3417412 + pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3060 M479_3061 M479_3061 pqqL pqqL 3417576 3419075 - insulinase family protease [R] COG0612 Predicted Zn-dependent peptidases gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3061 M479_3062 M479_3062 M479_3062 3419262 3419378 + hypothetical protein conserved hypothetical protein gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3062 M479_3063 M479_3063 dctA dctA 3419440 3420729 - aerobic C4-dicarboxylate transport protein [C] COG1301 Na+/H+-dicarboxylate symporters gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3063 M479_3064 M479_3064 M479_3064 3421184 3421663 - F5/8 type C domain protein gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3064 M479_3065 M479_3065 pelY pelY 3421788 3423506 - periplasmic pectate lyase gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3065 M479_3066 M479_3066 kdgM kdgM 3423752 3424456 - oligogalacturonate-specific porin kdgM gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3066 M479_3067 M479_3067 M479_3067 3425096 3427111 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3067 M479_3068 M479_3068 M479_3068 3427425 3428324 - glycosyl hydrolases 8 family protein [G] COG3405 Endoglucanase Y gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3068 M479_3069 M479_3069 M479_3069 3428643 3429719 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[E] COG4608 ABC-type oligopeptide transport system%2C ATPase component gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3069 M479_307 M479_307 M479_307 315674 318127 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=M479_307 M479_3070 M479_3070 M479_3070 3429716 3430696 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3070 M479_3071 M479_3071 M479_3071 3430805 3431602 - binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3071 M479_3072 M479_3072 M479_3072 3431613 3432632 - binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3072 M479_3073 M479_3073 M479_3073 3432915 3434522 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3073 M479_3074 M479_3074 M479_3074 3434925 3435131 - hypothetical protein gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3074 M479_3075 M479_3075 M479_3075 3435191 3436954 - hemolysin secretion/activation ShlB/FhaC/HecB family protein [U] COG2831 Hemolysin activation/secretion protein gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3075 M479_3076 M479_3076 M479_3076 3437063 3438454 - hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3076 M479_3077 M479_3077 M479_3077 3438767 3438843 - tRNA-Pro tRNA gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3077 M479_3079 M479_3079 M479_3079 3438960 3440291 - phosphoglycerate transporter family protein 2A0104: phosphoglycerate transporter family protein~[G] COG2271 Sugar phosphate permease gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3079 M479_308 M479_308 M479_308 318198 319055 - apurinic endonuclease family protein nfo: apurinic endonuclease family protein~[L] COG0648 Endonuclease IV gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=M479_308 M479_3080 M479_3080 M479_3080 3440386 3441915 - histidine kinase family protein [T] COG3851 Signal transduction histidine kinase%2C glucose-6-phosphate specific gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3080 M479_3081 M479_3081 uhpA uhpA 3441912 3442502 - transcriptional regulatory protein uhpA [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3081 M479_3082 M479_3082 M479_3082 3442618 3444309 - hypothetical protein conserved hypothetical protein~[R] COG2194 Predicted membrane-associated%2C metal-dependent hydrolase gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3082 M479_3083 M479_3083 M479_3083 3444380 3445159 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3083 M479_3084 M479_3084 M479_3084 3445159 3445473 - putative transposase Orf A%2C insertion element IS100 [L] COG4584 Transposase and inactivated derivatives gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3084 M479_3085 M479_3085 M479_3085 3445493 3446182 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3085 M479_3086 M479_3086 M479_3086 3446499 3446810 + hypothetical protein conserved hypothetical protein gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3086 M479_3087 M479_3087 M479_3087 3446882 3448513 - hypothetical protein acyl-CoA dehydrogenase%2C C-terminal domain protein~[I] COG1960 Acyl-CoA dehydrogenases gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3087 M479_3088 M479_3088 M479_3088 3448933 3449673 - RNA 2'-O ribose methyltransferase substrate binding family protein [J] COG0566 rRNA methylases gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3088 M479_3089 M479_3089 rnr rnr 3449802 3452327 - ribonuclease R RNase_R: ribonuclease R~[K] COG0557 Exoribonuclease R gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3089 M479_309 M479_309 M479_309 319219 320307 - hypothetical protein conserved hypothetical family protein~[S] COG2855 Predicted membrane protein gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=M479_309 M479_3090 M479_3090 nsrR nsrR 3452568 3452993 - HTH-type transcriptional repressor nsrR [K] COG1959 Predicted transcriptional regulator gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3090 M479_3091 M479_3091 purA purA 3453342 3454640 - adenylosuccinate synthase purA: adenylosuccinate synthase~[F] COG0104 Adenylosuccinate synthase gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3091 M479_3092 M479_3092 M479_3092 3454740 3454988 - hypothetical protein conserved hypothetical protein~[S] COG3242 Uncharacterized protein conserved in bacteria gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3092 M479_3093 M479_3093 hflC hflC 3455112 3456116 - HflC protein hflC: HflC protein~[O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3093 M479_3094 M479_3094 hflK hflK 3456120 3457379 - HflK protein hflK: HflK protein~[O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3094 M479_3095 M479_3095 hflX hflX 3457620 3458906 - GTP-binding protein HflX GTP_HflX: GTP-binding protein HflX~[R] COG2262 GTPases gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3095 M479_3096 M479_3096 hfq hfq 3459005 3459310 - RNA chaperone Hfq hfq: RNA chaperone Hfq~[R] COG1923 Uncharacterized host factor I protein gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3096 M479_3097 M479_3097 miaA miaA 3459426 3460367 - tRNA dimethylallyltransferase miaA: tRNA dimethylallyltransferase~[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3097 M479_3098 M479_3098 mutL mutL 3460360 3462267 - DNA mismatch repair MutL family protein mutl: DNA mismatch repair MutL family protein~[L] COG0323 DNA mismatch repair enzyme (predicted ATPase) gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3098 M479_3099 M479_3099 M479_3099 3462283 3464196 - N-acetylmuramoyl-L-alanine amidase family protein [M] COG0860 N-acetylmuramoyl-L-alanine amidase gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3099 M479_31 M479_31 lipB lipB 35926 36624 - lipoyl(octanoyl) transferase lipB: lipoyl(octanoyl) transferase~[H] COG0321 Lipoate-protein ligase B gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=M479_31 M479_310 M479_310 M479_310 320965 321837 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=M479_310 M479_3100 M479_3100 M479_3100 3464204 3464674 - tRNA threonylcarbamoyl adenosine modification protein YjeE T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE~[R] COG0802 Predicted ATPase or kinase gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3100 M479_3101 M479_3101 M479_3101 3464685 3466199 - hypothetical protein conserved hypothetical protein~[G] COG0063 Predicted sugar kinase gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3101 M479_3102 M479_3102 queG queG 3466294 3467433 + epoxyqueuosine reductase [C] COG1600 Uncharacterized Fe-S protein gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3102 M479_3103 M479_3103 M479_3103 3467745 3467820 - tRNA-Gly tRNA gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3103 M479_3105 M479_3105 orn orn 3468256 3468801 - oligoribonuclease [A] COG1949 Oligoribonuclease (3'->5' exoribonuclease) gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3105 M479_3106 M479_3106 rsgA rsgA 3469001 3470053 + ribosome small subunit-dependent GTPase A [R] COG1162 Predicted GTPases gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3106 M479_3107 M479_3107 psd psd 3470378 3471259 + phosphatidylserine decarboxylase PS_decarb: phosphatidylserine decarboxylase~[I] COG0688 Phosphatidylserine decarboxylase gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3107 M479_3108 M479_3108 M479_3108 3471301 3474642 + mechanosensitive ion channel family protein [M] COG3264 Small-conductance mechanosensitive channel gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3108 M479_3109 M479_3109 M479_3109 3474763 3475740 - EF-P lysine aminoacylase GenX genX: EF-P lysine aminoacylase GenX~[J] COG2269 Truncated%2C possibly inactive%2C lysyl-tRNA synthetase (class II) gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3109 M479_311 M479_311 M479_311 321839 321985 + hypothetical protein conserved hypothetical protein gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=M479_311 M479_3110 M479_3110 frdA frdA 3476198 3478021 + fumarate reductase%2C flavoprotein subunit fum_red_Fp: fumarate reductase%2C flavoprotein subunit~[C] COG1053 Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3110 M479_3111 M479_3111 M479_3111 3478014 3478748 + succinate dehydrogenase and fumarate reductase iron-sulfur family protein dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein~[C] COG0479 Succinate dehydrogenase/fumarate reductase%2C Fe-S protein subunit gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3111 M479_3112 M479_3112 frdC frdC 3478765 3479157 + fumarate reductase subunit C [C] COG3029 Fumarate reductase subunit C gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3112 M479_3113 M479_3113 frdD frdD 3479174 3479530 + fumarate reductase subunit D [C] COG3080 Fumarate reductase subunit D gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3113 M479_3114 M479_3114 sugE sugE 3479695 3480009 - quaternary ammonium compound-resistance protein sugE [P] COG2076 Membrane transporters of cations and cationic drugs gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3114 M479_3115 M479_3115 efp efp 3480256 3480822 - translation elongation factor P efp: translation elongation factor P~[J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3115 M479_3116 M479_3116 epmB epmB 3480903 3481886 + EF-P beta-lysylation protein EpmB EFP_modif_epmB: EF-P beta-lysylation protein EpmB~[E] COG1509 Lysine 2%2C3-aminomutase gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3116 M479_3117 M479_3117 M479_3117 3482171 3482446 - hypothetical protein conserved hypothetical protein gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3117 M479_3118 M479_3118 groL groL 3483193 3484839 - chaperonin GroL groEL: chaperonin GroL~[O] COG0459 Chaperonin GroEL (HSP60 family) gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3118 M479_3119 M479_3119 groS groS 3484886 3485179 - 10 kDa chaperonin [O] COG0234 Co-chaperonin GroES (HSP10) gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3119 M479_312 M479_312 M479_312 322095 323606 + amino acid permease family protein [E] COG0833 Amino acid transporters gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=M479_312 M479_3120 M479_3120 M479_3120 3485434 3486012 - fxsA cytoplasmic membrane family protein [R] COG3030 Protein affecting phage T7 exclusion by the F plasmid gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3120 M479_3121 M479_3121 aspA aspA 3486460 3487896 + aspartate ammonia-lyase aspA: aspartate ammonia-lyase~[E] COG1027 Aspartate ammonia-lyase gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3121 M479_3122 M479_3122 dcuA dcuA 3488016 3489317 + anaerobic C4-dicarboxylate transporter dcuA [R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3122 M479_3123 M479_3123 cutA cutA 3489538 3489861 + divalent-cation tolerance protein CutA [P] COG1324 Uncharacterized protein involved in tolerance to divalent cations gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3123 M479_3124 M479_3124 M479_3124 3489837 3491624 + cytochrome C biogenesis transmembrane region family protein [OC] COG4232 Thiol:disulfide interchange protein gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3124 M479_3125 M479_3125 M479_3125 3491686 3493833 - formate dehydrogenase%2C alpha subunit fdh-alpha: formate dehydrogenase%2C alpha subunit~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3125 M479_3126 M479_3126 M479_3126 3493856 3494413 - 4Fe-4S dicluster domain protein [C] COG1142 Fe-S-cluster-containing hydrogenase components 2 gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3126 M479_3127 M479_3127 M479_3127 3494436 3496451 - glutamate synthase%2C small subunit domain protein gltD_gamma_fam: glutamate synthase%2C small subunit domain protein~[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3127 M479_3128 M479_3128 M479_3128 3496871 3497446 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3128 M479_3129 M479_3129 M479_3129 3497591 3497666 + tRNA-Phe tRNA gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3129 M479_313 M479_313 M479_313 323805 324263 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=M479_313 M479_3131 M479_3131 M479_3131 3498100 3500655 - viral enhancin family protein gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3131 M479_3132 M479_3132 M479_3132 3500911 3501030 + hypothetical protein conserved hypothetical protein gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3132 M479_3133 M479_3133 subB subB 3501082 3501507 + subtilase cytotoxin%2C subunit B gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3133 M479_3134 M479_3134 M479_3134 3501943 3502185 - hypothetical protein conserved hypothetical protein gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3134 M479_3135 M479_3135 M479_3135 3502339 3503373 + RhaT L-rhamnose-proton symporter family protein rhaT: RhaT L-rhamnose-proton symporter family protein~[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3135 M479_3136 M479_3136 M479_3136 3503522 3504394 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3136 M479_3137 M479_3137 M479_3137 3504527 3505348 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3137 M479_3138 M479_3138 M479_3138 3505430 3505573 - hypothetical protein conserved hypothetical protein gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3138 M479_3139 M479_3139 M479_3139 3505570 3505776 - putative phosphoribosylaminoimidazol (AIR) synthetase gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3139 M479_314 M479_314 M479_314 324603 325748 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=M479_314 M479_3140 M479_3140 rhaB rhaB 3505814 3507232 + rhamnulokinase rhamnulo_kin: rhamnulokinase~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3140 M479_3141 M479_3141 rhaA rhaA 3507229 3508485 + L-rhamnose isomerase rhaA: L-rhamnose isomerase~[G] COG4806 L-rhamnose isomerase gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3141 M479_3142 M479_3142 rhaD rhaD 3508498 3509322 + rhamnulose-1-phosphate aldolase rhamnu_1P_ald: rhamnulose-1-phosphate aldolase~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3142 M479_3143 M479_3143 fucO fucO 3509389 3510537 + lactaldehyde reductase lactal_redase: lactaldehyde reductase~[C] COG1454 Alcohol dehydrogenase%2C class IV gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3143 M479_3144 M479_3144 rhaM rhaM 3510551 3510865 + L-rhamnose mutarotase yiiL_rotase: L-rhamnose mutarotase~[S] COG3254 Uncharacterized conserved protein gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3144 M479_3145 M479_3145 ssb ssb 3511130 3511678 - single-stranded DNA-binding protein [L] COG0629 Single-stranded DNA-binding protein gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3145 M479_3146 M479_3146 uvrA uvrA 3512136 3514979 + excinuclease ABC subunit A uvra: excinuclease ABC subunit A~[L] COG0178 Excinuclease ATPase subunit gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3146 M479_3147 M479_3147 M479_3147 3515072 3515431 - hypothetical protein conserved hypothetical protein~[S] COG2315 Uncharacterized protein conserved in bacteria gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3147 M479_3148 M479_3148 M479_3148 3515958 3517151 - aminotransferase class I and II family protein [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3148 M479_3149 M479_3149 alr alr 3517337 3518416 - alanine racemase alr: alanine racemase~[M] COG0787 Alanine racemase gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3149 M479_315 M479_315 M479_315 325923 327005 + fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=M479_315 M479_3150 M479_3150 dnaB dnaB 3518513 3519919 - replicative DNA helicase dnaB: replicative DNA helicase~[L] COG0305 Replicative DNA helicase gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3150 M479_3151 M479_3151 M479_3151 3520251 3521234 + zinc-binding dehydrogenase family protein [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3151 M479_3152 M479_3152 pspG pspG 3521579 3521797 - phage shock protein G phageshock_pspG: phage shock protein G gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3152 M479_3153 M479_3153 dusA dusA 3522313 3523350 - tRNA dihydrouridine synthase A family protein yjbN: tRNA dihydrouridine synthase A family protein~[J] COG0042 tRNA-dihydrouridine synthase gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3153 M479_3154 M479_3154 M479_3154 3523605 3524114 + ferric uptake regulator family protein [P] COG0735 Fe2+/Zn2+ uptake regulation proteins gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3154 M479_3155 M479_3155 lexA lexA 3524288 3524896 - repressor LexA lexA: repressor LexA~[KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3155 M479_3156 M479_3156 dgkA dgkA 3525021 3525392 - diacylglycerol kinase [M] COG0818 Diacylglycerol kinase gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3156 M479_3157 M479_3157 plsB plsB 3525520 3527997 + glycerol-3-phosphate O-acyltransferase plsB: glycerol-3-phosphate O-acyltransferase~[I] COG2937 Glycerol-3-phosphate O-acyltransferase gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3157 M479_3158 M479_3158 ubiA ubiA 3528178 3529044 - 4-hydroxybenzoate polyprenyl transferase ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase~[H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3158 M479_3159 M479_3159 M479_3159 3529210 3529734 - chorismate lyase family protein [H] COG3161 4-hydroxybenzoate synthetase (chorismate lyase) gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3159 M479_316 M479_316 M479_316 327002 327790 + ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=M479_316 M479_3160 M479_3160 M479_3160 3530566 3533121 + hypothetical protein conserved hypothetical protein gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3160 M479_3161 M479_3161 M479_3161 3533121 3534374 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3161 M479_3162 M479_3162 M479_3162 3534718 3536775 - fibronectin type III domain protein [C] COG0277 FAD/FMN-containing dehydrogenases gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3162 M479_3163 M479_3163 M479_3163 3537784 3539103 - hypothetical protein conserved hypothetical protein gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3163 M479_3164 M479_3164 M479_3164 3540296 3540550 - putative membrane protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3164 M479_3165 M479_3165 M479_3165 3540561 3541304 - hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3165 M479_3166 M479_3166 M479_3166 3541376 3543754 - hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3166 M479_3167 M479_3167 M479_3167 3544005 3544643 - hypothetical protein conserved hypothetical protein gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3167 M479_3168 M479_3168 M479_3168 3545356 3545931 - terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3168 M479_3169 M479_3169 M479_3169 3546115 3546693 - terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3169 M479_317 M479_317 M479_317 328050 330047 + tonB dependent receptor family protein [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=M479_317 M479_3170 M479_3170 M479_3170 3546757 3547794 - integral membrane%2C TerC family protein R_switched_Alx: integral membrane%2C TerC family protein~[P] COG0861 Membrane protein TerC%2C possibly involved in tellurium resistance gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3170 M479_3171 M479_3171 M479_3171 3547816 3548271 - tellurite resistance TerB family protein [P] COG3793 Tellurite resistance protein gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3171 M479_3172 M479_3172 M479_3172 3548304 3549488 - terD domain protein [R] COG4110 Uncharacterized protein involved in stress response gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3172 M479_3173 M479_3173 M479_3173 3549488 3550081 - terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3173 M479_3174 M479_3174 M479_3174 3550357 3551418 + ATP-grasp in the biosynthetic pathway with Ter operon family protein gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3174 M479_3175 M479_3175 M479_3175 3551433 3552566 + phosphoribosyl transferase domain protein gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3175 M479_3176 M479_3176 M479_3176 3552559 3553371 + hypothetical protein conserved hypothetical protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3176 M479_3177 M479_3177 M479_3177 3553364 3554443 + phosphoribosyl transferase family protein gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3177 M479_3178 M479_3178 M479_3178 3554443 3555402 + C-C Bond Lyase of the TIM-Barrel fold family protein [G] COG2301 Citrate lyase beta subunit gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3178 M479_3179 M479_3179 M479_3179 3555799 3556287 + putative tellurite resistance protein gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3179 M479_318 M479_318 M479_318 330317 330937 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=M479_318 M479_3180 M479_3180 M479_3180 3556602 3557402 + methylenetetrahydrofolate reductase family protein [E] COG0685 5%2C10-methylenetetrahydrofolate reductase gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3180 M479_3181 M479_3181 hutW hutW 3557743 3559056 + putative heme utilization radical SAM enzyme HutW rSAM_HutW: putative heme utilization radical SAM enzyme HutW~[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3181 M479_3182 M479_3182 M479_3182 3559107 3559616 + hypothetical protein conserved hypothetical protein~[P] COG3721 Putative heme iron utilization protein gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3182 M479_3183 M479_3183 M479_3183 3559650 3560300 + trkA-N domain protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3183 M479_3184 M479_3184 M479_3184 3560386 3560577 + hemin uptake hemP family protein gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3184 M479_3185 M479_3185 M479_3185 3560707 3562737 + TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3185 M479_3186 M479_3186 hemS hemS 3562856 3563893 + hemin transport protein hemS [P] COG3720 Putative heme degradation protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3186 M479_3187 M479_3187 hmuT hmuT 3563890 3564729 + hemin-binding periplasmic protein hmuT [P] COG4558 ABC-type hemin transport system%2C periplasmic component gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3187 M479_3188 M479_3188 M479_3188 3564726 3565730 + fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3188 M479_3189 M479_3189 hmuV hmuV 3565723 3566523 + hemin import ATP-binding protein HmuV [P] COG4559 ABC-type hemin transport system%2C ATPase component gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3189 M479_319 M479_319 M479_319 331091 331741 - HAD phosphoserine phosphatase-like hydrolase%2C IB family protein HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase%2C IB family protein~[E] COG0560 Phosphoserine phosphatase gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=M479_319 M479_3190 M479_3190 metC metC 3566664 3567845 - cystathionine beta-lyase cysta_beta_ly_B: cystathionine beta-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3190 M479_3191 M479_3191 M479_3191 3567891 3569177 - putative membrane protein [E] COG0814 Amino acid permeases gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3191 M479_3192 M479_3192 M479_3192 3569347 3570330 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3192 M479_3193 M479_3193 M479_3193 3570408 3570629 - hypothetical protein conserved hypothetical protein~[O] COG0425 Predicted redox protein%2C regulator of disulfide bond formation gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3193 M479_3194 M479_3194 M479_3194 3570674 3571888 - sulfur transport family protein [R] COG2391 Predicted transporter component gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3194 M479_3195 M479_3195 M479_3195 3572271 3573338 - type III secretion%2C YscU/HrpY family protein flhB_rel_III: type III secretion%2C YscU/HrpY family protein~[U] COG4792 Type III secretory pathway%2C component EscU gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3195 M479_3196 M479_3196 epaR epaR 3573328 3574122 - type III secretion apparatus protein SpaR/YscT/HrcT fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT~[U] COG4791 Type III secretory pathway%2C component EscT gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3196 M479_3197 M479_3197 M479_3197 3574124 3574417 - type III secretion%2C HrpO family protein fliQ_rel_III: type III secretion%2C HrpO family protein~[U] COG4794 Type III secretory pathway%2C component EscS gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3197 M479_3198 M479_3198 epaP epaP 3574414 3575064 - type III secretion apparatus protein%2C YscR/HrcR family yscR: type III secretion apparatus protein%2C YscR/HrcR family~[U] COG4790 Type III secretory pathway%2C component EscR gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3198 M479_3199 M479_3199 epaO epaO 3575191 3576153 - type III secretion apparatus protein%2C YscQ/HrcQ family spaO_YscQ: type III secretion apparatus protein%2C YscQ/HrcQ family~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3199 M479_32 M479_32 M479_32 36839 37102 - hypothetical protein conserved hypothetical protein~[S] COG2921 Uncharacterized conserved protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=M479_32 M479_320 M479_320 M479_320 332143 332265 + hypothetical protein conserved hypothetical protein gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=M479_320 M479_3200 M479_3200 M479_3200 3576131 3576529 - hypothetical protein conserved hypothetical protein gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3200 M479_3201 M479_3201 M479_3201 3576510 3576911 - putative type III secretion system apparatus protein gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3201 M479_3202 M479_3202 M479_3202 3576908 3578245 - ATPase%2C FliI/YscN family protein fliI_yscN: ATPase%2C FliI/YscN family protein~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3202 M479_3203 M479_3203 M479_3203 3578232 3580280 - type III secretion%2C HrcV family protein hrcV: type III secretion%2C HrcV family protein~[U] COG4789 Type III secretory pathway%2C component EscV gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3203 M479_3204 M479_3204 M479_3204 3580273 3580920 - type III secretion apparatus protein%2C HrpE/YscL family hrpE_YscL_not: type III secretion apparatus protein%2C HrpE/YscL family gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3204 M479_3205 M479_3205 M479_3205 3580917 3581510 - type III secretion system subunit gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3205 M479_3206 M479_3206 M479_3206 3581685 3582416 - type III secretion apparatus lipoprotein%2C YscJ/HrcJ family III_secr_YscJ: type III secretion apparatus lipoprotein%2C YscJ/HrcJ family~[U] COG4669 Type III secretory pathway%2C lipoprotein EscJ gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3206 M479_3207 M479_3207 M479_3207 3582413 3582664 - hypothetical protein yscI_hrpB_dom: type III secretion apparatus protein%2C YscI/HrpB%2C C-terminal domain gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3207 M479_3208 M479_3208 M479_3208 3582762 3583010 - hypothetical protein conserved hypothetical protein gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3208 M479_3209 M479_3209 eprI eprI 3583007 3583222 - type III secretion apparatus needle protein III_needle: type III secretion apparatus needle protein gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3209 M479_321 M479_321 M479_321 332228 333295 + 2OG-Fe(II) oxygenase superfamily protein [R] COG3491 Isopenicillin N synthase and related dioxygenases gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=M479_321 M479_3210 M479_3210 M479_3210 3583232 3583939 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3210 M479_3211 M479_3211 M479_3211 3584046 3584267 - putative type III secretion apparatus gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3211 M479_3212 M479_3212 M479_3212 3584286 3585500 - type III secretion apparatus protein%2C YscD/HrpQ family type_III_yscD: type III secretion apparatus protein%2C YscD/HrpQ family gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3212 M479_3213 M479_3213 M479_3213 3585502 3587001 - type III secretion outer membrane pore%2C YscC/HrcC family type_III_yscC: type III secretion outer membrane pore%2C YscC/HrcC family~[NU] COG1450 Type II secretory pathway%2C component PulD gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3213 M479_3214 M479_3214 M479_3214 3587245 3590064 + hpt domain protein [T] COG0642 Signal transduction histidine kinase gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3214 M479_3215 M479_3215 M479_3215 3590077 3590709 + bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3215 M479_3216 M479_3216 M479_3216 3590887 3592203 - dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[C] COG1301 Na+/H+-dicarboxylate symporters gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3216 M479_3217 M479_3217 acs acs 3593058 3595016 + acetate--CoA ligase ac_CoA_lig_AcsA: acetate--CoA ligase~[I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3217 M479_3218 M479_3218 M479_3218 3595073 3595384 + hypothetical protein conserved hypothetical protein~[S] COG3162 Predicted membrane protein gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3218 M479_3219 M479_3219 actP actP 3595381 3597036 + cation/acetate symporter ActP symport_actP: cation/acetate symporter ActP~[R] COG4147 Predicted symporter gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3219 M479_322 M479_322 M479_322 333523 334347 + NLPA lipofamily protein [P] COG1464 ABC-type metal ion transport system%2C periplasmic component/surface antigen gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=M479_322 M479_3220 M479_3220 M479_3220 3597110 3598096 - dienelactone hydrolase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3220 M479_3221 M479_3221 M479_3221 3598155 3599177 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3221 M479_3222 M479_3222 M479_3222 3599177 3599956 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3222 M479_3223 M479_3223 M479_3223 3599966 3600226 - hypothetical protein conserved hypothetical protein gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3223 M479_3224 M479_3224 M479_3224 3600621 3601373 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3224 M479_3225 M479_3225 M479_3225 3601454 3601720 - transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3225 M479_3226 M479_3226 M479_3226 3602187 3602299 - 5S ribosomal RNA rRNA gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3226 M479_3227 M479_3227 M479_3227 3602413 3605315 - 23S ribosomal RNA rRNA gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3227 M479_3228 M479_3228 M479_3228 3605571 3605646 - tRNA-Glu tRNA gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3228 M479_3229 M479_3229 M479_3229 3605789 3607317 - 16S ribosomal RNA rRNA gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3229 M479_323 M479_323 M479_323 334344 335330 + ABC transporter family protein [P] COG1135 ABC-type metal ion transport system%2C ATPase component gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=M479_323 M479_3230 M479_3230 M479_3230 3607454 3607573 - hypothetical protein conserved hypothetical protein gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3230 M479_3231 M479_3231 M479_3231 3607877 3608419 + hexapeptide repeat of succinyl-transferase family protein [R] COG0663 Carbonic anhydrases/acetyltransferases%2C isoleucine patch superfamily gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3231 M479_3232 M479_3232 aroE aroE 3608474 3609295 - shikimate dehydrogenase aroE: shikimate dehydrogenase~[E] COG0169 Shikimate 5-dehydrogenase gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3232 M479_3233 M479_3233 M479_3233 3609304 3609876 - telomere recombination family protein [J] COG0009 Putative translation factor (SUA5) gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3233 M479_3234 M479_3234 M479_3234 3609878 3610417 - topoisomerase DNA binding C4 zinc finger family protein [L] COG0551 Zn-finger domain associated with topoisomerase type I gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3234 M479_3235 M479_3235 M479_3235 3610458 3610931 - hypothetical protein conserved hypothetical protein~[S] COG2922 Uncharacterized protein conserved in bacteria gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3235 M479_3236 M479_3236 dprA dprA 3610903 3612024 - DNA protecting protein DprA dprA: DNA protecting protein DprA~[LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3236 M479_3237 M479_3237 def def 3612159 3612671 + peptide deformylase pept_deformyl: peptide deformylase~[J] COG0242 N-formylmethionyl-tRNA deformylase gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3237 M479_3238 M479_3238 fmt fmt 3612696 3613643 + methionyl-tRNA formyltransferase fmt: methionyl-tRNA formyltransferase~[J] COG0223 Methionyl-tRNA formyltransferase gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3238 M479_3239 M479_3239 rsmB rsmB 3613737 3615026 + 16S rRNA (cytosine(967)-C(5))-methyltransferase rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase~[J] COG0144 tRNA and rRNA cytosine-C5-methylases gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3239 M479_324 M479_324 M479_324 335327 335998 + binding--dependent transport system inner membrane component family protein [P] COG2011 ABC-type metal ion transport system%2C permease component gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=M479_324 M479_3240 M479_3240 M479_3240 3615082 3616458 + ketopantoate reductase PanE/ApbA family protein [P] COG0569 K+ transport systems%2C NAD-binding component gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3240 M479_3241 M479_3241 mscL mscL 3616606 3617010 + large conductance mechanosensitive channel protein mscL: large conductance mechanosensitive channel protein~[M] COG1970 Large-conductance mechanosensitive channel gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3241 M479_3242 M479_3242 M479_3242 3617120 3617320 - hypothetical protein domain of unknown function family protein~[S] COG3036 Uncharacterized protein conserved in bacteria gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3242 M479_3243 M479_3243 zntR zntR 3617408 3617833 - Zn(II)-responsive transcriptional regulator zntR: Zn(II)-responsive transcriptional regulator~[K] COG0789 Predicted transcriptional regulators gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3243 M479_3244 M479_3244 rplQ rplQ 3618280 3618669 - ribosomal protein L17 L17: ribosomal protein L17~[J] COG0203 Ribosomal protein L17 gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3244 M479_3245 M479_3245 rpoA rpoA 3618710 3619699 - DNA-directed RNA polymerase%2C alpha subunit rpoA: DNA-directed RNA polymerase%2C alpha subunit~[K] COG0202 DNA-directed RNA polymerase%2C alpha subunit/40 kD subunit gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3245 M479_3246 M479_3246 rpsD rpsD 3619725 3620345 - ribosomal protein S4 rpsD_bact: ribosomal protein S4~[J] COG0522 Ribosomal protein S4 and related proteins gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3246 M479_3247 M479_3247 rpsK rpsK 3620376 3620765 - 30S ribosomal protein S11 bact_S11: 30S ribosomal protein S11~[J] COG0100 Ribosomal protein S11 gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3247 M479_3248 M479_3248 rpsM rpsM 3620782 3621138 - 30S ribosomal protein S13 bact_S13: 30S ribosomal protein S13~[J] COG0099 Ribosomal protein S13 gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3248 M479_3249 M479_3249 rpmJ rpmJ 3621286 3621402 - ribosomal protein L36 rpmJ_bact: ribosomal protein L36~[J] COG0257 Ribosomal protein L36 gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3249 M479_325 M479_325 M479_325 336333 337538 + D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=M479_325 M479_3250 M479_3250 secY secY 3621436 3622767 - preprotein translocase%2C SecY subunit 3a0501s007: preprotein translocase%2C SecY subunit~[U] COG0201 Preprotein translocase subunit SecY gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3250 M479_3251 M479_3251 rplO rplO 3622775 3623209 - ribosomal protein L15 rplO_bact: ribosomal protein L15~[J] COG0200 Ribosomal protein L15 gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3251 M479_3252 M479_3252 rpmD rpmD 3623213 3623392 - ribosomal protein L30 rpmD_bact: ribosomal protein L30~[J] COG1841 Ribosomal protein L30/L7E gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3252 M479_3253 M479_3253 rpsE rpsE 3623395 3623898 - ribosomal protein S5 rpsE_bact: ribosomal protein S5~[J] COG0098 Ribosomal protein S5 gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3253 M479_3254 M479_3254 rplR rplR 3623913 3624266 - ribosomal protein L18 L18_bact: ribosomal protein L18~[J] COG0256 Ribosomal protein L18 gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3254 M479_3255 M479_3255 rplF rplF 3624276 3624809 - ribosomal protein L6 L6_bact: ribosomal protein L6~[J] COG0097 Ribosomal protein L6P/L9E gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3255 M479_3256 M479_3256 rpsH rpsH 3624824 3625216 - 30S ribosomal protein S8 [J] COG0096 Ribosomal protein S8 gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3256 M479_3257 M479_3257 M479_3257 3625250 3625555 - ribosomal S14p/S29e family protein [J] COG0199 Ribosomal protein S14 gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3257 M479_3258 M479_3258 rplE rplE 3625569 3626108 - 50S ribosomal protein L5 [J] COG0094 Ribosomal protein L5 gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3258 M479_3259 M479_3259 rplX rplX 3626123 3626437 - ribosomal protein L24 rplX_bact: ribosomal protein L24~[J] COG0198 Ribosomal protein L24 gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3259 M479_326 M479_326 stp stp 337979 339280 - serine transporter family protein stp: serine transporter family protein~[E] COG0814 Amino acid permeases gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=M479_326 M479_3260 M479_3260 rplN rplN 3626448 3626819 - ribosomal protein L14 rplN_bact: ribosomal protein L14~[J] COG0093 Ribosomal protein L14 gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3260 M479_3261 M479_3261 rpsQ rpsQ 3627000 3627254 - 30S ribosomal protein S17 S17_bact: 30S ribosomal protein S17~[J] COG0186 Ribosomal protein S17 gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3261 M479_3262 M479_3262 rpmC rpmC 3627254 3627445 - ribosomal protein L29 L29: ribosomal protein L29~[J] COG0255 Ribosomal protein L29 gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3262 M479_3263 M479_3263 rplP rplP 3627445 3627855 - ribosomal protein L16 rplP_bact: ribosomal protein L16~[J] COG0197 Ribosomal protein L16/L10E gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3263 M479_3264 M479_3264 rpsC rpsC 3627868 3628566 - ribosomal protein S3 rpsC_bact: ribosomal protein S3~[J] COG0092 Ribosomal protein S3 gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3264 M479_3265 M479_3265 rplV rplV 3628584 3628916 - ribosomal protein L22 rplV_bact: ribosomal protein L22~[J] COG0091 Ribosomal protein L22 gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3265 M479_3266 M479_3266 rpsS rpsS 3628931 3629209 - ribosomal protein S19 rpsS_bact: ribosomal protein S19~[J] COG0185 Ribosomal protein S19 gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3266 M479_3267 M479_3267 rplB rplB 3629224 3630048 - ribosomal protein L2 rplB_bact: ribosomal protein L2~[J] COG0090 Ribosomal protein L2 gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3267 M479_3268 M479_3268 rplW rplW 3630065 3630367 - 50S ribosomal protein L23 [J] COG0089 Ribosomal protein L23 gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3268 M479_3269 M479_3269 rplD rplD 3630364 3630969 - 50S ribosomal protein L4 rplD_bact: 50S ribosomal protein L4~[J] COG0088 Ribosomal protein L4 gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3269 M479_327 M479_327 M479_327 340380 341144 - deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=M479_327 M479_3270 M479_3270 rplC rplC 3630986 3631615 - 50S ribosomal protein L3 L3_bact: 50S ribosomal protein L3~[J] COG0087 Ribosomal protein L3 gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3270 M479_3271 M479_3271 rpsJ rpsJ 3631648 3631959 - ribosomal protein S10 rpsJ_bact: ribosomal protein S10~[J] COG0051 Ribosomal protein S10 gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3271 M479_3272 M479_3272 bfr bfr 3632373 3632846 - bacterioferritin bfr: bacterioferritin~[P] COG2193 Bacterioferritin (cytochrome b1) gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3272 M479_3273 M479_3273 bfd bfd 3632925 3633119 - bacterioferritin-associated ferredoxin [P] COG2906 Bacterioferritin-associated ferredoxin gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3273 M479_3274 M479_3274 M479_3274 3633307 3633765 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3274 M479_3275 M479_3275 tuf tuf 3633968 3635152 - translation elongation factor Tu EF-Tu: translation elongation factor Tu~[J] COG0050 GTPases - translation elongation factors gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3275 M479_3276 M479_3276 fusA fusA 3635225 3637333 - translation elongation factor G EF-G: translation elongation factor G~[J] COG0480 Translation elongation factors (GTPases) gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3276 M479_3277 M479_3277 rpsG rpsG 3637427 3637897 - ribosomal protein S7 rpsG_bact: ribosomal protein S7~[J] COG0049 Ribosomal protein S7 gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3277 M479_3278 M479_3278 rpsL rpsL 3637994 3638368 - ribosomal protein S12 rpsL_bact: ribosomal protein S12~[J] COG0048 Ribosomal protein S12 gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3278 M479_3279 M479_3279 dsrH dsrH 3638506 3638793 - sulfur relay protein TusB/DsrH sulf_tusB_dsrH: sulfur relay protein TusB/DsrH~[P] COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3279 M479_328 M479_328 deoC deoC 341374 342045 - deoxyribose-phosphate aldolase deoC: deoxyribose-phosphate aldolase~[F] COG0274 Deoxyribose-phosphate aldolase gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=M479_328 M479_3280 M479_3280 tusC tusC 3638813 3639178 - sulfur relay protein TusC/DsrF sulf_tusC_dsrF: sulfur relay protein TusC/DsrF~[P] COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3280 M479_3281 M479_3281 M479_3281 3639178 3639573 - dsrE/DsrF-like family protein [P] COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3281 M479_3282 M479_3282 M479_3282 3639573 3640295 - sensory box protein [S] COG2964 Uncharacterized protein conserved in bacteria gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3282 M479_3283 M479_3283 M479_3283 3640549 3641349 - domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3283 M479_3284 M479_3284 M479_3284 3641664 3641882 + slyX family protein [S] COG2900 Uncharacterized protein conserved in bacteria gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3284 M479_3285 M479_3285 slyD slyD 3642103 3642690 - FKBP-type peptidyl-prolyl cis-trans isomerase slyD [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3285 M479_3286 M479_3286 M479_3286 3642785 3643006 - hypothetical protein conserved hypothetical protein~[R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3286 M479_3287 M479_3287 M479_3287 3643022 3644830 - transporter%2C monovalent cation:proton antiporter-2 family protein 2a37: transporter%2C monovalent cation:proton antiporter-2 family protein~[P] COG0475 Kef-type K+ transport systems%2C membrane components gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3287 M479_3288 M479_3288 M479_3288 3644834 3645382 - NADPH-dependent FMN reductase family protein [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3288 M479_3289 M479_3289 M479_3289 3645633 3647555 + miro-like family protein [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3289 M479_329 M479_329 M479_329 342303 342908 - PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=M479_329 M479_3290 M479_3290 M479_3290 3647690 3648679 + glycosyltransferase like 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3290 M479_3291 M479_3291 M479_3291 3648772 3649350 + putative lPS biosynthetic enzyme [M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3291 M479_3292 M479_3292 M479_3292 3649307 3649753 + glycosyltransferase 9 family protein [M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3292 M479_3293 M479_3293 tauD tauD 3649766 3650614 - alpha-ketoglutarate-dependent taurine dioxygenase [Q] COG2175 Probable taurine catabolism dioxygenase gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3293 M479_3294 M479_3294 M479_3294 3650611 3651465 - binding--dependent transport system inner membrane component family protein [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3294 M479_3295 M479_3295 M479_3295 3651462 3652229 - ABC transporter family protein [P] COG4525 ABC-type taurine transport system%2C ATPase component gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3295 M479_3296 M479_3296 tauA tauA 3652238 3653299 - taurine ABC transporter%2C periplasmic binding protein taurine_ABC_bnd: taurine ABC transporter%2C periplasmic binding protein~[P] COG4521 ABC-type taurine transport system%2C periplasmic component gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3296 M479_3297 M479_3297 M479_3297 3653502 3654104 - lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3297 M479_3298 M479_3298 M479_3298 3654206 3655186 + alpha/beta hydrolase family protein [R] COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3298 M479_3299 M479_3299 M479_3299 3655183 3655419 + hypothetical protein conserved hypothetical protein~[S] COG3089 Uncharacterized protein conserved in bacteria gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3299 M479_33 M479_33 M479_33 37300 38502 - D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=M479_33 M479_330 M479_330 M479_330 342908 343678 - PAP2 superfamily protein [R] COG3907 PAP2 (acid phosphatase) superfamily protein gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=M479_330 M479_3300 M479_3300 M479_3300 3655568 3656437 + phosphoribulokinase / Uridine kinase family protein [C] COG3954 Phosphoribulokinase gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3300 M479_3301 M479_3301 M479_3301 3656615 3657046 - hypothetical protein conserved hypothetical protein gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3301 M479_3302 M479_3302 M479_3302 3657118 3657525 - osmC-like family protein [O] COG1765 Predicted redox protein%2C regulator of disulfide bond formation gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3302 M479_3303 M479_3303 M479_3303 3657861 3658493 + bacterial regulatory s%2C crp family protein [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3303 M479_3304 M479_3304 M479_3304 3658579 3660699 + integral membrane%2C YccS/YhfK family protein YCCS_YHJK: integral membrane%2C YccS/YhfK family protein~[S] COG1289 Predicted membrane protein gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3304 M479_3305 M479_3305 astC astC 3660925 3662142 - succinylornithine transaminase family protein arg_catab_astC: succinylornithine transaminase family protein~[E] COG4992 Ornithine/acetylornithine aminotransferase gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3305 M479_3306 M479_3306 M479_3306 3662275 3662850 - glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein trpG_papA: glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein~[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3306 M479_3307 M479_3307 M479_3307 3663093 3664568 - ftsK/SpoIIIE family protein [R] COG0433 Predicted ATPase gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3307 M479_3308 M479_3308 ppiA ppiA 3664960 3665529 - peptidyl-prolyl cis-trans isomerase A [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3308 M479_3309 M479_3309 M479_3309 3666045 3667250 + hypothetical protein family 4 glycosyl hydrolase C-terminal domain protein~[G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases%2C family 4 of glycosyl hydrolases gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3309 M479_331 M479_331 M479_331 344056 345744 - AspT/YidE/YbjL antiporter duplication domain protein yidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain protein~[R] COG2985 Predicted permease gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=M479_331 M479_3310 M479_3310 M479_3310 3667600 3668586 + helix-turn-helix family protein [K] COG1609 Transcriptional regulators gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3310 M479_3311 M479_3311 M479_3311 3668687 3670747 - TonB-dependent copper receptor tonB-copper: TonB-dependent copper receptor~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3311 M479_3312 M479_3312 M479_3312 3671233 3672417 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3312 M479_3313 M479_3313 M479_3313 3672502 3673800 - amidohydrolase family protein [FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3313 M479_3314 M479_3314 nirB nirB 3674122 3676668 + nitrite reductase [NAD(P)H]%2C large subunit nitri_red_nirB: nitrite reductase [NAD(P)H]%2C large subunit~[C] COG1251 NAD(P)H-nitrite reductase gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3314 M479_3315 M479_3315 nirD nirD 3676665 3676991 + nitrite reductase [NAD(P)H] small subunit [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3315 M479_3316 M479_3316 M479_3316 3677170 3677976 + putative nitrite transporter [P] COG2116 Formate/nitrite family of transporters gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3316 M479_3317 M479_3317 cobA cobA 3678064 3679485 + uroporphyrinogen-III C-methyltransferase cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase~[H] COG0007 Uroporphyrinogen-III methylase gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3317 M479_3318 M479_3318 trpS trpS 3679604 3680644 - tryptophan--tRNA ligase trpS: tryptophan--tRNA ligase~[J] COG0180 Tryptophanyl-tRNA synthetase gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3318 M479_3319 M479_3319 gph gph 3680646 3681344 - phosphoglycolate phosphatase%2C bacterial PGP_bact: phosphoglycolate phosphatase%2C bacterial~[R] COG0546 Predicted phosphatases gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3319 M479_332 M479_332 grxA grxA 346154 346417 - glutaredoxin%2C GrxA family GRXA: glutaredoxin%2C GrxA family~[O] COG0695 Glutaredoxin and related proteins gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=M479_332 M479_3320 M479_3320 rpe rpe 3681337 3682014 - ribulose-phosphate 3-epimerase rpe: ribulose-phosphate 3-epimerase~[G] COG0036 Pentose-5-phosphate-3-epimerase gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3320 M479_3321 M479_3321 dam dam 3682317 3683132 - DNA adenine methylase family protein dam: DNA adenine methylase family protein~[L] COG0338 Site-specific DNA methylase gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3321 M479_3322 M479_3322 M479_3322 3683216 3684205 - sporulation related domain protein [S] COG3266 Uncharacterized protein conserved in bacteria gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3322 M479_3323 M479_3323 aroB aroB 3684459 3685547 - 3-dehydroquinate synthase aroB: 3-dehydroquinate synthase~[E] COG0337 3-dehydroquinate synthetase gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3323 M479_3324 M479_3324 aroK aroK 3685604 3686125 - shikimate kinase 1 [E] COG0703 Shikimate kinase gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3324 M479_3325 M479_3325 pilQ pilQ 3686474 3687826 - type IV pilus secretin PilQ family protein IV_pilus_PilQ: type IV pilus secretin PilQ family protein~[U] COG4796 Type II secretory pathway%2C component HofQ gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3325 M479_3326 M479_3326 M479_3326 3688025 3688384 - hypothetical protein conserved hypothetical protein gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3326 M479_3327 M479_3327 M479_3327 3688419 3689045 - hypothetical protein conserved hypothetical protein gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3327 M479_3328 M479_3328 M479_3328 3688993 3689598 - fimbrial assembly family protein [NU] COG3166 Tfp pilus assembly protein PilN gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3328 M479_3329 M479_3329 M479_3329 3689598 3690494 - putative ATPases of the HSP70 class involved in cell division gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3329 M479_333 M479_333 M479_333 346880 347194 + hypothetical protein conserved hypothetical protein gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=M479_333 M479_3330 M479_3330 M479_3330 3690614 3693169 + penicillin-binding%2C 1A family protein PBP_1a_fam: penicillin-binding%2C 1A family protein~[M] COG5009 Membrane carboxypeptidase/penicillin-binding protein gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3330 M479_3331 M479_3331 M479_3331 3693305 3693850 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3331 M479_3332 M479_3332 M479_3332 3693963 3694157 - hypothetical protein conserved hypothetical protein gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3332 M479_3333 M479_3333 M479_3333 3694437 3696584 + intracellular growth attenuator IgaA family protein gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3333 M479_3334 M479_3334 M479_3334 3696728 3697408 + HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3334 M479_3335 M479_3335 M479_3335 3697437 3697844 + S4 domain protein [J] COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3335 M479_3336 M479_3336 hslO hslO 3698007 3698888 + 33 kDa chaperonin [O] COG1281 Disulfide bond chaperones of the HSP33 family gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3336 M479_3337 M479_3337 pckA pckA 3699085 3700704 + phosphoenolpyruvate carboxykinase pckA: phosphoenolpyruvate carboxykinase~[C] COG1866 Phosphoenolpyruvate carboxykinase (ATP) gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3337 M479_3338 M479_3338 M479_3338 3700859 3702211 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3338 M479_3339 M479_3339 ompR ompR 3702208 3702927 - transcriptional regulatory protein ompR [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3339 M479_334 M479_334 M479_334 347336 347821 + bacterial sensory transduction regulator family protein gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=M479_334 M479_3340 M479_3340 greB greB 3703063 3703578 - transcription elongation factor GreB greB: transcription elongation factor GreB~[K] COG0782 Transcription elongation factor gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3340 M479_3341 M479_3341 M479_3341 3704112 3706487 + S1 RNA binding domain protein [K] COG2183 Transcriptional accessory protein gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3341 M479_3342 M479_3342 feoA feoA 3707011 3707238 + ferrous iron transport protein A [P] COG1918 Fe2+ transport system protein A gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3342 M479_3343 M479_3343 feoB feoB 3707330 3709645 + ferrous iron transport protein B feoB: ferrous iron transport protein B~[P] COG0370 Fe2+ transport system protein B gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3343 M479_3344 M479_3344 feoC feoC 3709681 3709938 + ferrous iron transport protein C gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3344 M479_3345 M479_3345 M479_3345 3710076 3710345 - hypothetical protein conserved hypothetical protein gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3345 M479_3346 M479_3346 bioH bioH 3710515 3711291 - pimelyl-[acyl-carrier protein] methyl ester esterase bioH: pimelyl-[acyl-carrier protein] methyl ester esterase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3346 M479_3347 M479_3347 M479_3347 3711378 3712079 + phosphoribosyl transferase domain protein [R] COG1040 Predicted amidophosphoribosyltransferases gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3347 M479_3348 M479_3348 nfuA nfuA 3712139 3712714 + fe/S biogenesis protein nfuA [O] COG0694 Thioredoxin-like proteins and domains gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3348 M479_3349 M479_3349 malQ malQ 3713043 3715139 - 4-alpha-glucanotransferase malQ: 4-alpha-glucanotransferase~[G] COG1640 4-alpha-glucanotransferase gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3349 M479_335 M479_335 potF potF 348339 349448 + putrescine-binding periplasmic protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=M479_335 M479_3350 M479_3350 glgP glgP 3715152 3717557 - glycogen/starch/alpha-glucan phosphorylases family protein P_ylase: glycogen/starch/alpha-glucan phosphorylases family protein~[G] COG0058 Glucan phosphorylase gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3350 M479_3351 M479_3351 M479_3351 3717875 3720586 + bacterial regulatory s%2C luxR family protein [K] COG2909 ATP-dependent transcriptional regulator gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3351 M479_3352 M479_3352 M479_3352 3720961 3721290 + rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3352 M479_3353 M479_3353 glpG glpG 3721308 3722144 + rhomboid family protease GlpG rhombo_GlpG: rhomboid family protease GlpG~[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3353 M479_3354 M479_3354 M479_3354 3722179 3722937 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3354 M479_3355 M479_3355 M479_3355 3723130 3723645 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3355 M479_3356 M479_3356 M479_3356 3723699 3724484 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3356 M479_3357 M479_3357 mdfA mdfA 3724957 3726186 + multidrug transporter MdfA [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3357 M479_3358 M479_3358 M479_3358 3726335 3726538 - hypothetical protein gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3358 M479_3359 M479_3359 M479_3359 3726659 3726817 + hypothetical protein conserved hypothetical protein gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3359 M479_336 M479_336 M479_336 349619 350752 + polyamine ABC transporter%2C ATP-binding family protein potA: polyamine ABC transporter%2C ATP-binding family protein~[E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=M479_336 M479_3360 M479_3360 M479_3360 3726896 3727477 + hypothetical protein conserved hypothetical protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3360 M479_3361 M479_3361 M479_3361 3727800 3729008 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3361 M479_3362 M479_3362 M479_3362 3729435 3729899 + tn3 transposase DDE domain protein [L] COG4644 Transposase and inactivated derivatives%2C TnpA family gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3362 M479_3363 M479_3363 selB selB 3729906 3731858 - selenocysteine-specific translation elongation factor selB: selenocysteine-specific translation elongation factor~[J] COG3276 Selenocysteine-specific translation elongation factor gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3363 M479_3364 M479_3364 selA selA 3731855 3733243 - L-seryl-tRNA(Sec) selenium transferase selA: L-seryl-tRNA(Sec) selenium transferase~[E] COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3364 M479_3365 M479_3365 fdhE fdhE 3733427 3734356 - formate dehydrogenase accessory protein FdhE fdhE: formate dehydrogenase accessory protein FdhE~[O] COG3058 Uncharacterized protein involved in formate dehydrogenase formation gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3365 M479_3366 M479_3366 M479_3366 3734356 3735030 - formate dehydrogenase%2C gamma subunit formate-DH-gamm: formate dehydrogenase%2C gamma subunit~[C] COG2864 Cytochrome b subunit of formate dehydrogenase gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3366 M479_3367 M479_3367 fdxH fdxH 3735027 3735998 - formate dehydrogenase%2C beta subunit FDH-beta: formate dehydrogenase%2C beta subunit~[C] COG0437 Fe-S-cluster-containing hydrogenase components 1 gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3367 M479_3368 M479_3368 fdnG fdnG 3736011 3738422 - formate dehydrogenase-N alpha subunit formate-DH-alph: formate dehydrogenase-N alpha subunit~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3368 M479_3369 M479_3369 M479_3369 3738471 3739058 - molybdopterin oxidoreductase Fe4S4 domain protein [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3369 M479_337 M479_337 M479_337 350777 351742 + binding--dependent transport system inner membrane component family protein [E] COG1176 ABC-type spermidine/putrescine transport system%2C permease component I gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=M479_337 M479_3370 M479_3370 M479_3370 3739255 3740079 + formate dehydrogenase family accessory protein FdhD fdhD_narQ: formate dehydrogenase family accessory protein FdhD~[C] COG1526 Uncharacterized protein required for formate dehydrogenase activity gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3370 M479_3371 M479_3371 M479_3371 3740515 3741138 + iron/manganese superoxide dismutase%2C alpha-hairpin domain protein [P] COG0605 Superoxide dismutase gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3371 M479_3372 M479_3372 M479_3372 3741482 3743431 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3372 M479_3373 M479_3373 M479_3373 3743669 3743851 + hypothetical protein conserved hypothetical protein gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3373 M479_3374 M479_3374 M479_3374 3744028 3744123 - hypothetical protein conserved hypothetical protein gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3374 M479_3375 M479_3375 M479_3375 3744484 3744960 + electron transfer DM13 family protein gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3375 M479_3376 M479_3376 M479_3376 3745129 3745485 - hypothetical protein conserved hypothetical protein gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3376 M479_3377 M479_3377 M479_3377 3745533 3745655 - hypothetical protein gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3377 M479_3378 M479_3378 mtlR mtlR 3745734 3746288 - mannitol operon repressor [K] COG3722 Transcriptional regulator gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3378 M479_3379 M479_3379 M479_3379 3746495 3747658 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3379 M479_338 M479_338 M479_338 351739 352584 + binding--dependent transport system inner membrane component family protein [E] COG1177 ABC-type spermidine/putrescine transport system%2C permease component II gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=M479_338 M479_3380 M479_3380 mtlA mtlA 3747795 3749726 - PTS system mannitol-specific EIICBA component [G] COG2213 Phosphotransferase system%2C mannitol-specific IIBC component gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3380 M479_3381 M479_3381 M479_3381 3750376 3751095 - hypothetical protein conserved hypothetical protein gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3381 M479_3382 M479_3382 glyS glyS 3751568 3753637 - glycine--tRNA ligase%2C beta subunit glyS: glycine--tRNA ligase%2C beta subunit~[J] COG0751 Glycyl-tRNA synthetase%2C beta subunit gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3382 M479_3383 M479_3383 glyQ glyQ 3753647 3754561 - glycyl-tRNA synthetase alpha subunit [J] COG0752 Glycyl-tRNA synthetase%2C alpha subunit gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3383 M479_3384 M479_3384 M479_3384 3754692 3754826 + hypothetical protein gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3384 M479_3385 M479_3385 tag tag 3754895 3755461 + DNA-3-methyladenine glycosylase I family protein tag: DNA-3-methyladenine glycosylase I family protein~[L] COG2818 3-methyladenine DNA glycosylase gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3385 M479_3386 M479_3386 M479_3386 3755458 3755913 + acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3386 M479_3387 M479_3387 M479_3387 3756271 3756930 + glycine zipper 2TM domain protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3387 M479_3388 M479_3388 M479_3388 3757061 3757705 - putative transcriptional regulator protein [K] COG2345 Predicted transcriptional regulator gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3388 M479_3389 M479_3389 M479_3389 3758224 3759204 + D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3389 M479_339 M479_339 ybjO ybjO 352709 353173 + inner membrane protein ybjO gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=M479_339 M479_3390 M479_3390 M479_3390 3759493 3761556 + alpha amylase%2C catalytic domain protein [G] COG0366 Glycosidases gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3390 M479_3391 M479_3391 M479_3391 3761971 3762414 + putative membrane protein gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3391 M479_3392 M479_3392 M479_3392 3762869 3764134 + aminotransferase class I and II family protein [E] COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3392 M479_3393 M479_3393 M479_3393 3764247 3765905 - AspT/YidE/YbjL antiporter duplication domain protein yidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain protein~[R] COG2985 Predicted permease gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3393 M479_3394 M479_3394 M479_3394 3766278 3766742 - hsp20/alpha crystallin family protein [O] COG0071 Molecular chaperone (small heat shock protein) gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3394 M479_3395 M479_3395 ibpA ibpA 3767023 3767436 - small heat shock protein ibpA [O] COG0071 Molecular chaperone (small heat shock protein) gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3395 M479_3396 M479_3396 M479_3396 3767804 3768142 + hypothetical protein conserved hypothetical protein~[R] COG5645 Predicted periplasmic lipoprotein gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3396 M479_3397 M479_3397 M479_3397 3768182 3768496 - hypothetical protein dipeptidyl peptidase IV (DPP IV) N-terminal region family protein gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3397 M479_3398 M479_3398 M479_3398 3768486 3768797 - hypothetical protein conserved hypothetical protein gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3398 M479_3399 M479_3399 M479_3399 3769005 3769967 + pyridoxal-phosphate dependent enzyme family protein [E] COG1171 Threonine dehydratase gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3399 M479_34 M479_34 rlpA rlpA 38905 39987 - rare lipoA family protein rlpA: rare lipoA family protein~[M] COG0797 Lipoproteins gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=M479_34 M479_340 M479_340 rumB rumB 353257 353985 + 23S rRNA (uracil-5-)-methyltransferase RumB meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB~[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=M479_340 M479_3400 M479_3400 M479_3400 3769961 3770914 + ornithine cyclodeaminase/mu-crystallin family protein [E] COG2423 Predicted ornithine cyclodeaminase%2C mu-crystallin homolog gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3400 M479_3401 M479_3401 M479_3401 3771137 3771652 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3401 M479_3402 M479_3402 M479_3402 3771706 3772491 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3402 M479_3403 M479_3403 M479_3403 3772883 3773692 - HAD hydrolase%2C IIB family protein HAD-SF-IIB: HAD hydrolase%2C IIB family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3403 M479_3404 M479_3404 gyrB gyrB 3773908 3776322 - DNA gyrase%2C B subunit gyrB: DNA gyrase%2C B subunit~[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C B subunit gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3404 M479_3405 M479_3405 recF recF 3776348 3777427 - DNA replication and repair RecF family protein recf: DNA replication and repair RecF family protein~[L] COG1195 Recombinational DNA repair ATPase (RecF pathway) gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3405 M479_3406 M479_3406 dnaN dnaN 3777600 3778700 - DNA polymerase III%2C beta subunit dnan: DNA polymerase III%2C beta subunit~[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3406 M479_3407 M479_3407 dnaA dnaA 3778705 3780093 - chromosomal replication initiator protein DnaA dnaA: chromosomal replication initiator protein DnaA~[L] COG0593 ATPase involved in DNA replication initiation gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3407 M479_3408 M479_3408 M479_3408 3780286 3780426 + hypothetical protein gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3408 M479_3409 M479_3409 rpmH rpmH 3780803 3780943 + ribosomal protein L34 rpmH_bact: ribosomal protein L34~[J] COG0230 Ribosomal protein L34 gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3409 M479_341 M479_341 M479_341 353987 354217 + hypothetical protein conserved hypothetical protein gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=M479_341 M479_3410 M479_3410 rnpA rnpA 3780995 3781321 + ribonuclease P protein component rnpA: ribonuclease P protein component~[J] COG0594 RNase P protein component gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3410 M479_3411 M479_3411 M479_3411 3781285 3781542 + putative membrane protein insertion efficiency factor [S] COG0759 Uncharacterized conserved protein gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3411 M479_3412 M479_3412 yidC yidC 3781545 3783185 + membrane protein insertase yidC_nterm: membrane protein insertase%2C YidC/Oxa1 family%2C N-terminal domain~[U] COG0706 Preprotein translocase subunit YidC gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3412 M479_3413 M479_3413 trmE trmE 3783328 3784692 + tRNA modification GTPase TrmE mnmE_trmE_thdF: tRNA modification GTPase TrmE~[R] COG0486 Predicted GTPase gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3413 M479_3414 M479_3414 M479_3414 3784878 3786077 + NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein [S] COG3007 Uncharacterized paraquat-inducible protein B gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3414 M479_3415 M479_3415 M479_3415 3786545 3786826 - putative membrane protein gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3415 M479_3416 M479_3416 M479_3416 3786888 3787508 - hypothetical protein conserved hypothetical protein gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3416 M479_3417 M479_3417 M479_3417 3788053 3789381 - permease family protein [R] COG2252 Permeases gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3417 M479_3418 M479_3418 M479_3418 3789874 3790542 + HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3418 M479_3419 M479_3419 M479_3419 3790577 3791332 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3419 M479_342 M479_342 M479_342 354558 355484 + SPFH domain / Band 7 family protein [O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=M479_342 M479_3420 M479_3420 M479_3420 3791334 3792071 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3420 M479_3421 M479_3421 M479_3421 3792254 3793108 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3421 M479_3422 M479_3422 M479_3422 3793328 3793999 - polymer-forming cytoskeletal family protein [M] COG1664 Integral membrane protein CcmA involved in cell shape determination gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3422 M479_3423 M479_3423 phoU phoU 3794295 3795017 - phosphate transport system regulatory protein PhoU phoU_full: phosphate transport system regulatory protein PhoU~[P] COG0704 Phosphate uptake regulator gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3423 M479_3424 M479_3424 pstB pstB 3795105 3795881 - phosphate ABC transporter%2C ATP-binding protein 3a0107s01c2: phosphate ABC transporter%2C ATP-binding protein~[P] COG1117 ABC-type phosphate transport system%2C ATPase component gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3424 M479_3425 M479_3425 pstA pstA 3795962 3796849 - phosphate ABC transporter%2C permease protein PstA 3a0107s02c: phosphate ABC transporter%2C permease protein PstA~[P] COG0581 ABC-type phosphate transport system%2C permease component gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3425 M479_3426 M479_3426 pstC pstC 3796851 3797807 - phosphate ABC transporter%2C permease protein PstC phosphate_pstC: phosphate ABC transporter%2C permease protein PstC~[P] COG0573 ABC-type phosphate transport system%2C permease component gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3426 M479_3427 M479_3427 pstS pstS 3798036 3799076 - phosphate ABC transporter%2C phosphate-binding protein PstS 3a0107s03: phosphate ABC transporter%2C phosphate-binding protein PstS~[P] COG0226 ABC-type phosphate transport system%2C periplasmic component gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3427 M479_3428 M479_3428 glmS glmS 3799559 3801388 - glutamine-fructose-6-phosphate transaminase glmS: glutamine-fructose-6-phosphate transaminase~[M] COG0449 Glucosamine 6-phosphate synthetase%2C contains amidotransferase and phosphosugar isomerase domains gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3428 M479_3429 M479_3429 glmU glmU 3801589 3802959 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase~[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3429 M479_343 M479_343 M479_343 355896 356987 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=M479_343 M479_3430 M479_3430 atpC atpC 3803580 3804002 - ATP synthase F1%2C epsilon subunit ATP_synt_epsi: ATP synthase F1%2C epsilon subunit~[C] COG0355 F0F1-type ATP synthase%2C epsilon subunit (mitochondrial delta subunit) gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3430 M479_3431 M479_3431 atpD atpD 3804024 3805406 - ATP synthase F1%2C beta subunit atpD: ATP synthase F1%2C beta subunit~[C] COG0055 F0F1-type ATP synthase%2C beta subunit gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3431 M479_3432 M479_3432 atpG atpG 3805562 3806425 - ATP synthase F1%2C gamma subunit ATPsyn_F1gamma: ATP synthase F1%2C gamma subunit~[C] COG0224 F0F1-type ATP synthase%2C gamma subunit gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3432 M479_3433 M479_3433 atpA atpA 3806487 3808028 - ATP synthase F1%2C alpha subunit atpA: ATP synthase F1%2C alpha subunit~[C] COG0056 F0F1-type ATP synthase%2C alpha subunit gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3433 M479_3434 M479_3434 atpH atpH 3808043 3808576 - ATP synthase F1%2C delta subunit ATP_synt_delta: ATP synthase F1%2C delta subunit~[C] COG0712 F0F1-type ATP synthase%2C delta subunit (mitochondrial oligomycin sensitivity protein) gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3434 M479_3435 M479_3435 atpF atpF 3808591 3809061 - ATP synthase F0%2C B subunit ATP_synt_b: ATP synthase F0%2C B subunit~[C] COG0711 F0F1-type ATP synthase%2C subunit b gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3435 M479_3436 M479_3436 atpE atpE 3809123 3809362 - ATP synthase F0%2C C subunit ATP_synt_c: ATP synthase F0%2C C subunit~[C] COG0636 F0F1-type ATP synthase%2C subunit c/Archaeal/vacuolar-type H+-ATPase%2C subunit K gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3436 M479_3437 M479_3437 atpB atpB 3809412 3810236 - ATP synthase F0%2C A subunit ATP_synt_6_or_A: ATP synthase F0%2C A subunit~[C] COG0356 F0F1-type ATP synthase%2C subunit a gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3437 M479_3438 M479_3438 M479_3438 3810276 3810659 - ATP synthase I chain family protein [C] COG3312 F0F1-type ATP synthase%2C subunit I gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3438 M479_3439 M479_3439 rsmG rsmG 3811326 3811946 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG~[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3439 M479_344 M479_344 M479_344 356987 357223 + putative iron(III) dicitrate transport system permease protein FecD gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=M479_344 M479_3440 M479_3440 gidA gidA 3812092 3813981 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3440 M479_3441 M479_3441 M479_3441 3814362 3814802 - flavodoxin family protein [C] COG0716 Flavodoxins gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3441 M479_3442 M479_3442 M479_3442 3814895 3815356 - asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3442 M479_3443 M479_3443 asnA asnA 3815526 3816518 + aspartate--ammonia ligase asnA: aspartate--ammonia ligase~[E] COG2502 Asparagine synthetase A gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3443 M479_3444 M479_3444 M479_3444 3816617 3818083 - VWA domain containing CoxE-like family protein [R] COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3444 M479_3445 M479_3445 M479_3445 3818087 3819640 - AAA domain family protein [R] COG0714 MoxR-like ATPases gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3445 M479_3446 M479_3446 kup kup 3819914 3821782 + potassium uptake protein kup: potassium uptake protein~[P] COG3158 K+ transporter gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3446 M479_3447 M479_3447 M479_3447 3821987 3822406 + rbsD / FucU transport family protein [G] COG1869 ABC-type ribose transport system%2C auxiliary component gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3447 M479_3448 M479_3448 M479_3448 3822457 3822885 + pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3448 M479_3449 M479_3449 M479_3449 3823000 3823383 + phosphomethylpyrimidine kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3449 M479_345 M479_345 M479_345 357177 358043 + ABC 3 transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=M479_345 M479_3450 M479_3450 M479_3450 3823603 3825027 - drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein efflux_EmrB: drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3450 M479_3451 M479_3451 rbsR rbsR 3823403 3823606 + ribose operon repressor [K] COG1609 Transcriptional regulators gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3451 M479_3452 M479_3452 M479_3452 3825107 3825796 - bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3452 M479_3453 M479_3453 M479_3453 3826363 3827893 + 16S ribosomal RNA rRNA gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3453 M479_3454 M479_3454 M479_3454 3828035 3828110 + tRNA-Glu tRNA gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3454 M479_3455 M479_3455 M479_3455 3828365 3831269 + 23S ribosomal RNA rRNA gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3455 M479_3456 M479_3456 M479_3456 3831381 3831495 + 5S ribosomal RNA rRNA gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3456 M479_3457 M479_3457 M479_3457 3831997 3833205 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3457 M479_3458 M479_3458 mobB mobB 3833263 3833793 - molybdopterin-guanine dinucleotide biosynthesis protein B mobB: molybdopterin-guanine dinucleotide biosynthesis protein B~[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3458 M479_3459 M479_3459 mobA mobA 3833793 3834380 - molybdenum cofactor guanylyltransferase molyb_mobA: molybdenum cofactor guanylyltransferase~[H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3459 M479_346 M479_346 M479_346 358040 358825 + ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=M479_346 M479_3460 M479_3460 yihD yihD 3834534 3834803 + protein yihD [S] COG3084 Uncharacterized protein conserved in bacteria gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3460 M479_3461 M479_3461 M479_3461 3834894 3835880 + phosphotransferase enzyme family protein [R] COG2334 Putative homoserine kinase type II (protein kinase fold) gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3461 M479_3462 M479_3462 M479_3462 3835908 3836531 + DSBA-like thioredoxin domain protein [OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3462 M479_3463 M479_3463 polA polA 3837023 3839821 + DNA polymerase I pola: DNA polymerase I~[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3463 M479_3464 M479_3464 ysxC ysxC 3840229 3840879 - ribosome biogenesis GTP-binding protein YsxC GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC~[R] COG0218 Predicted GTPase gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3464 M479_3465 M479_3465 M479_3465 3841624 3842190 + der GTPase activator family protein [S] COG3078 Uncharacterized protein conserved in bacteria gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3465 M479_3466 M479_3466 hemN hemN 3842373 3843746 + oxygen-independent coproporphyrinogen III oxidase hemN: oxygen-independent coproporphyrinogen III oxidase~[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3466 M479_3467 M479_3467 ntrC ntrC 3843800 3845212 - nitrogen regulation protein NR ntrC: nitrogen regulation protein NR~[T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3467 M479_3468 M479_3468 M479_3468 3845220 3846269 - PAS fold family protein [T] COG3852 Signal transduction histidine kinase%2C nitrogen specific gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3468 M479_3469 M479_3469 glnA glnA 3846522 3847931 - glutamine synthetase%2C type I glnA: glutamine synthetase%2C type I~[E] COG0174 Glutamine synthetase gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3469 M479_347 M479_347 M479_347 358813 359610 + nicotianamine synthase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=M479_347 M479_3470 M479_3470 typA typA 3848493 3850316 + GTP-binding protein TypA/BipA typA_BipA: GTP-binding protein TypA/BipA~[T] COG1217 Predicted membrane GTPase involved in stress response gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3470 M479_3471 M479_3471 M479_3471 3850638 3851228 + HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3471 M479_3472 M479_3472 yihY yihY 3851325 3852209 + YihY family inner membrane domain protein yihY_not_rbn: YihY family inner membrane domain protein~[S] COG1295 Predicted membrane protein gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3472 M479_3473 M479_3473 dtd dtd 3852216 3852653 + D-tyrosyl-tRNA(Tyr) deacylase [J] COG1490 D-Tyr-tRNAtyr deacylase gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3473 M479_3474 M479_3474 M479_3474 3852727 3853506 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3474 M479_3475 M479_3475 M479_3475 3853506 3854528 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3475 M479_3476 M479_3476 M479_3476 3854798 3855721 + putative thioesterase domain protein yiiD_Cterm: putative thioesterase domain protein~[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3476 M479_3477 M479_3477 M479_3477 3855856 3857565 - asmA family protein gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3477 M479_3478 M479_3478 pbuX pbuX 3857713 3859098 - xanthine permease family protein pbuX: xanthine permease family protein~[F] COG2233 Xanthine/uracil permeases gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3478 M479_3479 M479_3479 gltS gltS 3859336 3860550 + sodium/glutamate symporter gltS: sodium/glutamate symporter~[E] COG0786 Na+/glutamate symporter gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3479 M479_348 M479_348 M479_348 359603 360973 + hypothetical protein conserved hypothetical protein~[S] COG4408 Uncharacterized protein conserved in bacteria gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=M479_348 M479_3480 M479_3480 recG recG 3860916 3862997 - ATP-dependent DNA helicase RecG recG: ATP-dependent DNA helicase RecG~[LK] COG1200 RecG-like helicase gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3480 M479_3481 M479_3481 trmH trmH 3862998 3863657 - tRNA guanosine-2'-O-methyltransferase [J] COG0566 rRNA methylases gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3481 M479_3482 M479_3482 spoT spoT 3863696 3865804 - bifunctional (p)ppGpp synthase/hydrolase SpoT [TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3482 M479_3483 M479_3483 rpoZ rpoZ 3865824 3866090 - DNA-directed RNA polymerase%2C omega subunit rpoZ: DNA-directed RNA polymerase%2C omega subunit~[K] COG1758 DNA-directed RNA polymerase%2C subunit K/omega gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3483 M479_3484 M479_3484 gmk gmk 3866145 3866768 - guanylate kinase guanyl_kin: guanylate kinase~[F] COG0194 Guanylate kinase gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3484 M479_3485 M479_3485 M479_3485 3867169 3868872 + NAD-dependent DNA ligase adenylation domain protein [L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3485 M479_3486 M479_3486 M479_3486 3868885 3869508 - hypothetical protein conserved hypothetical protein~[S] COG2860 Predicted membrane protein gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3486 M479_3487 M479_3487 M479_3487 3869911 3870774 - hypothetical protein conserved hypothetical protein~[S] COG1561 Uncharacterized stress-induced protein gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3487 M479_3488 M479_3488 rph rph 3870901 3871617 + ribonuclease PH RNasePH: ribonuclease PH~[J] COG0689 RNase PH gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3488 M479_3489 M479_3489 pyrE pyrE 3871784 3872431 + orotate phosphoribosyltransferase pyrE: orotate phosphoribosyltransferase~[F] COG0461 Orotate phosphoribosyltransferase gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3489 M479_349 M479_349 M479_349 360970 361815 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=M479_349 M479_3490 M479_3490 M479_3490 3872566 3873162 - bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3490 M479_3491 M479_3491 dut dut 3873284 3873742 - dUTP diphosphatase family protein dut: dUTP diphosphatase family protein~[F] COG0756 dUTPase gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3491 M479_3492 M479_3492 coaBC coaBC 3873720 3874934 - phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase~[H] COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3492 M479_3493 M479_3493 M479_3493 3875131 3875799 + DNA repair RadC family protein radc: DNA repair RadC family protein~[L] COG2003 DNA repair proteins gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3493 M479_3494 M479_3494 rpmB rpmB 3876062 3876298 + ribosomal protein L28 L28: ribosomal protein L28~[J] COG0227 Ribosomal protein L28 gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3494 M479_3495 M479_3495 rpmG rpmG 3876310 3876477 + ribosomal protein L33 rpmG_bact: ribosomal protein L33~[J] COG0267 Ribosomal protein L33 gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3495 M479_3496 M479_3496 coaD coaD 3877365 3877844 - pantetheine-phosphate adenylyltransferase coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase~[H] COG0669 Phosphopantetheine adenylyltransferase gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3496 M479_3497 M479_3497 mutM mutM 3876560 3877396 + DNA-formamidopyrimidine glycosylase fpg: DNA-formamidopyrimidine glycosylase~[L] COG0266 Formamidopyrimidine-DNA glycosylase gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3497 M479_3498 M479_3498 M479_3498 3877841 3878623 - glycosyltransferase like 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3498 M479_3499 M479_3499 M479_3499 3878624 3879901 - glycosyl transferases group 1 family protein [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3499 M479_35 M479_35 mrdB mrdB 39997 41109 - rod shape-determining protein RodA rodA_shape: rod shape-determining protein RodA~[D] COG0772 Bacterial cell division membrane protein gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=M479_35 M479_350 M479_350 M479_350 362005 362673 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4160 ABC-type arginine/histidine transport system%2C permease component gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=M479_350 M479_3500 M479_3500 waaC waaC 3880321 3881286 - lipopolysaccharide heptosyltransferase I heptsyl_trn_I: lipopolysaccharide heptosyltransferase I~[M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3500 M479_3501 M479_3501 waaF waaF 3881286 3882350 - lipopolysaccharide heptosyltransferase II heptsyl_trn_II: lipopolysaccharide heptosyltransferase II~[M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3501 M479_3502 M479_3502 rfaD rfaD 3882381 3883313 - ADP-glyceromanno-heptose 6-epimerase heptose_epim: ADP-glyceromanno-heptose 6-epimerase~[MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3502 M479_3503 M479_3503 kbl kbl 3883559 3884770 + glycine C-acetyltransferase 2am3keto_CoA: glycine C-acetyltransferase~[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3503 M479_3504 M479_3504 tdh tdh 3884780 3885805 + L-threonine 3-dehydrogenase tdh: L-threonine 3-dehydrogenase~[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3504 M479_3505 M479_3505 M479_3505 3885943 3886443 - divergent polysaccharide deacetylase family protein [S] COG2861 Uncharacterized protein conserved in bacteria gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3505 M479_3506 M479_3506 M479_3506 3886440 3886877 - divergent polysaccharide deacetylase family protein [S] COG2861 Uncharacterized protein conserved in bacteria gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3506 M479_3507 M479_3507 M479_3507 3886901 3888271 - peptidase M23 family protein [D] COG4942 Membrane-bound metallopeptidase gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3507 M479_3508 M479_3508 gpmI gpmI 3888281 3889828 - phosphoglycerate mutase pgm_bpd_ind: phosphoglycerate mutase~[G] COG0696 Phosphoglyceromutase gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3508 M479_3509 M479_3509 M479_3509 3890228 3890659 + rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3509 M479_351 M479_351 M479_351 362673 363389 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4215 ABC-type arginine transport system%2C permease component gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=M479_351 M479_3510 M479_3510 grxC grxC 3890778 3891026 + glutaredoxin 3 GRX_bact: glutaredoxin 3~[O] COG0695 Glutaredoxin and related proteins gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3510 M479_3511 M479_3511 secB secB 3891114 3891590 + protein-export chaperone SecB secB: protein-export chaperone SecB~[U] COG1952 Preprotein translocase subunit SecB gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3511 M479_3512 M479_3512 M479_3512 3891590 3892609 + ketopantoate reductase PanE/ApbA family protein [C] COG0240 Glycerol-3-phosphate dehydrogenase gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3512 M479_3513 M479_3513 cysE cysE 3892875 3893696 + serine O-acetyltransferase cysE: serine O-acetyltransferase~[E] COG1045 Serine acetyltransferase gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3513 M479_3514 M479_3514 trmL trmL 3893819 3894307 - tRNA (cytidine(34)-2'-O)-methyltransferase tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase~[J] COG0219 Predicted rRNA methylase (SpoU class) gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3514 M479_3515 M479_3515 M479_3515 3894496 3895560 + methylated-DNA--[]-cysteine S-methyltransferase family protein ogt: methylated-DNA--[]-cysteine S-methyltransferase family protein~[F] COG2169 Adenosine deaminase gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3515 M479_3516 M479_3516 cpxA cpxA 3895609 3896985 - sensor protein CpxA [T] COG0642 Signal transduction histidine kinase gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3516 M479_3517 M479_3517 cpxR cpxR 3896982 3897680 - transcriptional regulatory protein CpxR [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3517 M479_3518 M479_3518 M479_3518 3897854 3898342 + LTXXQ motif family protein [UNTP] COG3678 P pilus assembly/Cpx signaling pathway%2C periplasmic inhibitor/zinc-resistance associated protein gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3518 M479_3519 M479_3519 M479_3519 3899059 3899979 + hypothetical protein T_den_put_tspse: conserved hypothetical family protein~[S] COG5464 Uncharacterized conserved protein gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3519 M479_352 M479_352 M479_352 363401 364132 - lysine-arginine-ornithine-binding periplasmic family protein 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein~[ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=M479_352 M479_3520 M479_3520 M479_3520 3900541 3901443 + cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG0053 Predicted Co/Zn/Cd cation transporters gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3520 M479_3521 M479_3521 pfkA pfkA 3901661 3902644 + 6-phosphofructokinase PFKA_ATP: 6-phosphofructokinase~[G] COG0205 6-phosphofructokinase gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3521 M479_3522 M479_3522 M479_3522 3903851 3904123 - hypothetical protein gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3522 M479_3523 M479_3523 M479_3523 3902865 3903854 + sulfate ABC transporter%2C sulfate-binding family protein 3a0106s03: sulfate ABC transporter%2C sulfate-binding family protein~[P] COG1613 ABC-type sulfate transport system%2C periplasmic component gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3523 M479_3524 M479_3524 M479_3524 3904104 3904880 - bacterial extracellular solute-binding family protein [P] COG0725 ABC-type molybdate transport system%2C periplasmic component gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3524 M479_3525 M479_3525 M479_3525 3904998 3905669 - transporter%2C divalent anion:Na+ symporter family protein dass: transporter%2C divalent anion:Na+ symporter family protein~[P] COG0471 Di- and tricarboxylate transporters gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3525 M479_3526 M479_3526 M479_3526 3905696 3906424 - transporter%2C divalent anion:Na+ symporter family protein dass: transporter%2C divalent anion:Na+ symporter family protein~[P] COG0471 Di- and tricarboxylate transporters gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3526 M479_3527 M479_3527 ligK ligK 3906490 3907203 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase~[H] COG0684 Demethylmenaquinone methyltransferase gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3527 M479_3528 M479_3528 M479_3528 3907200 3907937 - glcNAc-PI de-N-acetylase family protein [S] COG2120 Uncharacterized proteins%2C LmbE homologs gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3528 M479_3529 M479_3529 M479_3529 3908131 3909309 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3529 M479_353 M479_353 artP artP 364153 364881 - arginine transport ATP-binding protein ArtP [E] COG4161 ABC-type arginine transport system%2C ATPase component gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=M479_353 M479_3530 M479_3530 tpiA tpiA 3909541 3910308 - triose-phosphate isomerase tim: triose-phosphate isomerase~[G] COG0149 Triosephosphate isomerase gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3530 M479_3531 M479_3531 M479_3531 3910437 3911072 - hypothetical protein conserved hypothetical protein gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3531 M479_3532 M479_3532 M479_3532 3911286 3911654 + hypothetical protein conserved hypothetical protein~[S] COG3152 Predicted membrane protein gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3532 M479_3533 M479_3533 M479_3533 3911995 3912741 - oxidoreductase NAD-binding domain protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3533 M479_3534 M479_3534 glpX glpX 3912896 3913906 - fructose-1%2C6-bisphosphatase%2C class II glpX: fructose-1%2C6-bisphosphatase%2C class II~[G] COG1494 Fructose-1%2C6-bisphosphatase/sedoheptulose 1%2C7-bisphosphatase and related proteins gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3534 M479_3535 M479_3535 glpK glpK 3914143 3915666 - glycerol kinase glycerol_kin: glycerol kinase~[C] COG0554 Glycerol kinase gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3535 M479_3536 M479_3536 glpF glpF 3915843 3916691 - glycerol uptake facilitator protein [G] COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3536 M479_3537 M479_3537 M479_3537 3917335 3917574 + hypothetical protein conserved hypothetical protein~[S] COG3074 Uncharacterized protein conserved in bacteria gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3537 M479_3538 M479_3538 M479_3538 3917782 3918240 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3538 M479_3539 M479_3539 M479_3539 3918611 3920725 - ABC transporter family protein [V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3539 M479_354 M479_354 M479_354 365176 365736 - putative chorismate mutase CM_mono2: putative chorismate mutase~[E] COG1605 Chorismate mutase gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=M479_354 M479_3540 M479_3540 M479_3540 3920718 3922010 - hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3540 M479_3541 M479_3541 M479_3541 3922223 3922462 + hypothetical protein conserved hypothetical protein gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3541 M479_3542 M479_3542 M479_3542 3923092 3923676 + hypothetical protein conserved hypothetical protein gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3542 M479_3543 M479_3543 rraA rraA 3923793 3924278 - regulator of ribonuclease activity A rraA_entero: regulator of ribonuclease activity A~[H] COG0684 Demethylmenaquinone methyltransferase gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3543 M479_3544 M479_3544 menA menA 3924420 3925337 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase menA: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~[H] COG1575 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3544 M479_3545 M479_3545 hslU hslU 3925573 3926904 - ATP-dependent protease HslVU%2C ATPase subunit hslU: ATP-dependent protease HslVU%2C ATPase subunit~[O] COG1220 ATP-dependent protease HslVU (ClpYQ)%2C ATPase subunit gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3545 M479_3546 M479_3546 hslV hslV 3926975 3927499 - ATP-dependent protease HslVU%2C peptidase subunit ATP_dep_HslV: ATP-dependent protease HslVU%2C peptidase subunit~[O] COG5405 ATP-dependent protease HslVU (ClpYQ)%2C peptidase subunit gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3546 M479_3547 M479_3547 ftsN ftsN 3927599 3928345 - cell division protein FtsN ftsN: cell division protein FtsN~[D] COG3087 Cell division protein gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3547 M479_3548 M479_3548 M479_3548 3928510 3929538 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3548 M479_3549 M479_3549 M479_3549 3929661 3929804 - hypothetical protein conserved hypothetical protein gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3549 M479_355 M479_355 M479_355 365906 366481 - putative lipoprotein YbjP gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=M479_355 M479_3550 M479_3550 priA priA 3929891 3932089 - primosomal protein N' priA: primosomal protein N'~[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3550 M479_3551 M479_3551 rpmE rpmE 3932342 3932557 + ribosomal protein L31 L31: ribosomal protein L31~[J] COG0254 Ribosomal protein L31 gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3551 M479_3552 M479_3552 yiaA yiaA 3933083 3933538 - inner membrane protein yiaA [S] COG4682 Predicted membrane protein gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3552 M479_3553 M479_3553 M479_3553 3933887 3934204 - met Apo-repressor%2C MetJ family protein [KE] COG3060 Transcriptional regulator of met regulon gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3553 M479_3554 M479_3554 metB metB 3934582 3935742 + O-succinylhomoserine (thiol)-lyase O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3554 M479_3555 M479_3555 M479_3555 3935745 3938180 + aspartate kinase domain protein asp_kinase: aspartate kinase domain protein~[E] COG0527 Aspartokinases gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3555 M479_3556 M479_3556 metF metF 3938413 3939297 + methylenetetrahydrofolate reductase [NAD(P)H] fadh2: methylenetetrahydrofolate reductase [NAD(P)H]~[E] COG0685 5%2C10-methylenetetrahydrofolate reductase gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3556 M479_3557 M479_3557 M479_3557 3939467 3940252 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3557 M479_3558 M479_3558 M479_3558 3940306 3940821 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3558 M479_3559 M479_3559 M479_3559 3940915 3941187 + hypothetical protein conserved hypothetical protein gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3559 M479_356 M479_356 M479_356 366578 367585 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=M479_356 M479_3560 M479_3560 M479_3560 3941184 3942176 + acyltransferase family protein [S] COG3274 Uncharacterized protein conserved in bacteria gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3560 M479_3561 M479_3561 M479_3561 3943053 3943610 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3561 M479_3562 M479_3562 M479_3562 3943725 3945515 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3562 M479_3563 M479_3563 M479_3563 3945541 3946176 + outer membrane usher family protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3563 M479_3564 M479_3564 M479_3564 3946269 3947036 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3564 M479_3565 M479_3565 M479_3565 3947075 3948061 + fimbrial family protein gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3565 M479_3566 M479_3566 xylB xylB 3948179 3949633 - xylulokinase xylB: xylulokinase~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3566 M479_3567 M479_3567 xylA xylA 3949757 3951076 - xylose isomerase xylose_isom_A: xylose isomerase~[G] COG2115 Xylose isomerase gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3567 M479_3568 M479_3568 xylF xylF 3951539 3952534 + D-xylose ABC transporter%2C D-xylose-binding protein xylF: D-xylose ABC transporter%2C D-xylose-binding protein~[G] COG4213 ABC-type xylose transport system%2C periplasmic component gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3568 M479_3569 M479_3569 ccmA ccmA 3952742 3954274 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3569 M479_357 M479_357 M479_357 367685 369175 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=M479_357 M479_3570 M479_3570 M479_3570 3954261 3955445 + branched-chain amino acid transport system / permease component family protein [G] COG4214 ABC-type xylose transport system%2C permease component gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3570 M479_3571 M479_3571 M479_3571 3955535 3956728 + helix-turn-helix domain protein [K] COG1609 Transcriptional regulators gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3571 M479_3572 M479_3572 M479_3572 3956858 3956948 + tRNA-Sec tRNA-SeC(p) tRNA gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3572 M479_3573 M479_3573 M479_3573 3957114 3958307 + phage integrase family protein [L] COG0582 Integrase gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3573 M479_3574 M479_3574 M479_3574 3958294 3959673 + hypothetical protein conserved hypothetical protein gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3574 M479_3575 M479_3575 M479_3575 3959941 3960186 - ogr/Delta-like zinc finger family protein gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3575 M479_3576 M479_3576 M479_3576 3960360 3960653 - transposase gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3576 M479_3577 M479_3577 M479_3577 3960653 3961138 - transposase DDE domain protein gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3577 M479_3578 M479_3578 M479_3578 3961331 3961693 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3578 M479_3579 M479_3579 hth hth 3962625 3962810 + helix-turn-helix XRE family protein gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3579 M479_358 M479_358 M479_358 369172 370191 - beta-eliminating lyase family protein [E] COG2008 Threonine aldolase gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=M479_358 M479_3580 M479_3580 M479_3580 3963543 3964301 - ABC transporter family protein [P] COG4604 ABC-type enterochelin transport system%2C ATPase component gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3580 M479_3581 M479_3581 M479_3581 3962983 3963546 + virulence RhuM family protein [R] COG3943 Virulence protein gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3581 M479_3582 M479_3582 M479_3582 3964298 3965305 - fecCD transport family protein [P] COG4605 ABC-type enterochelin transport system%2C permease component gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3582 M479_3583 M479_3583 M479_3583 3965295 3966254 - fecCD transport family protein [P] COG4606 ABC-type enterochelin transport system%2C permease component gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3583 M479_3584 M479_3584 M479_3584 3966264 3967217 - periplasmic binding family protein [P] COG4607 ABC-type enterochelin transport system%2C periplasmic component gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3584 M479_3585 M479_3585 M479_3585 3967740 3968984 - ATP-grasp domain protein [I] COG0439 Biotin carboxylase gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3585 M479_3586 M479_3586 M479_3586 3968986 3969915 - eamA-like transporter family protein gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3586 M479_3587 M479_3587 M479_3587 3969998 3970564 - phosphoribosyl transferase domain protein [F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3587 M479_3588 M479_3588 M479_3588 3970561 3971505 - pyridoxal-phosphate dependent enzyme family protein [E] COG0031 Cysteine synthase gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3588 M479_3589 M479_3589 hutU hutU 3972232 3973923 + urocanate hydratase hutU: urocanate hydratase~[E] COG2987 Urocanate hydratase gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3589 M479_359 M479_359 M479_359 370540 372261 - thiamine pyrophosphate enzyme%2C central domain protein [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=M479_359 M479_3590 M479_3590 hutH hutH 3973920 3975452 + histidine ammonia-lyase hutH: histidine ammonia-lyase~[E] COG2986 Histidine ammonia-lyase gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3590 M479_3591 M479_3591 M479_3591 3975886 3977289 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3591 M479_3592 M479_3592 M479_3592 3977757 3979220 + alpha/beta hydrolase family protein [I] COG2267 Lysophospholipase gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3592 M479_3593 M479_3593 M479_3593 3979837 3980859 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3593 M479_3594 M479_3594 M479_3594 3980859 3981371 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3594 M479_3595 M479_3595 M479_3595 3981454 3981639 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3595 M479_3596 M479_3596 M479_3596 3982103 3982178 + tRNA-Thr tRNA gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3596 M479_3597 M479_3597 M479_3597 3982197 3982281 + tRNA-Tyr tRNA gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3597 M479_3598 M479_3598 M479_3598 3982431 3982505 + tRNA-Gly tRNA gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3598 M479_3599 M479_3599 M479_3599 3982512 3982587 + tRNA-Thr tRNA gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3599 M479_36 M479_36 mrdA mrdA 41309 43204 - penicillin-binding protein 2 pbp2_mrdA: penicillin-binding protein 2~[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=M479_36 M479_360 M479_360 M479_360 372405 373427 - 2Fe-2S iron-sulfur cluster binding domain protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=M479_360 M479_3600 M479_3600 tuf tuf 3982696 3983880 + translation elongation factor Tu EF-Tu: translation elongation factor Tu~[J] COG0050 GTPases - translation elongation factors gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3600 M479_3601 M479_3601 secE secE 3984131 3984514 + preprotein translocase%2C SecE subunit secE_bact: preprotein translocase%2C SecE subunit~[U] COG0690 Preprotein translocase subunit SecE gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3601 M479_3602 M479_3602 nusG nusG 3984516 3985061 + transcription termination/antitermination factor NusG nusG: transcription termination/antitermination factor NusG~[K] COG0250 Transcription antiterminator gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3602 M479_3603 M479_3603 rplK rplK 3985252 3985680 + ribosomal protein L11 L11_bact: ribosomal protein L11~[J] COG0080 Ribosomal protein L11 gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3603 M479_3604 M479_3604 rplA rplA 3985684 3986388 + ribosomal protein L1 rplA_bact: ribosomal protein L1~[J] COG0081 Ribosomal protein L1 gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3604 M479_3605 M479_3605 rplJ rplJ 3986753 3987250 + 50S ribosomal protein L10 [J] COG0244 Ribosomal protein L10 gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3605 M479_3606 M479_3606 rplL rplL 3987317 3987685 + ribosomal protein L7/L12 L12: ribosomal protein L7/L12~[J] COG0222 Ribosomal protein L7/L12 gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3606 M479_3607 M479_3607 M479_3607 3987831 3987968 - hypothetical protein conserved hypothetical protein gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3607 M479_3608 M479_3608 rpoB rpoB 3988028 3992056 + DNA-directed RNA polymerase%2C beta subunit rpoB: DNA-directed RNA polymerase%2C beta subunit~[K] COG0085 DNA-directed RNA polymerase%2C beta subunit/140 kD subunit gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3608 M479_3609 M479_3609 rpoC rpoC 3992185 3996405 + DNA-directed RNA polymerase%2C beta' subunit rpoC_TIGR: DNA-directed RNA polymerase%2C beta' subunit~[K] COG0086 DNA-directed RNA polymerase%2C beta' subunit/160 kD subunit gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3609 M479_361 M479_361 hcp hcp 373541 375193 - hydroxylamine reductase hybrid_clust: hydroxylamine reductase~[C] COG1151 6Fe-6S prismane cluster-containing protein gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=M479_361 M479_3610 M479_3610 M479_3610 3996711 3997256 - biotin and Thiamin Synthesis associated domain protein [HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3610 M479_3611 M479_3611 M479_3611 3997243 3997842 - radical SAM superfamily protein [HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3611 M479_3612 M479_3612 M479_3612 3997835 3998206 - thiazole biosynthesis ThiG family protein [H] COG2022 Uncharacterized enzyme of thiazole biosynthesis gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3612 M479_3613 M479_3613 M479_3613 3998206 3998637 - thiazole biosynthesis ThiG family protein [H] COG2022 Uncharacterized enzyme of thiazole biosynthesis gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3613 M479_3614 M479_3614 thiS thiS 3998639 3998854 - thiamine biosynthesis protein ThiS thiS: thiamine biosynthesis protein ThiS~[H] COG2104 Sulfur transfer protein involved in thiamine biosynthesis gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3614 M479_3615 M479_3615 M479_3615 3998851 3999648 - thiF family protein [H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3615 M479_3616 M479_3616 thiE thiE 3999638 4000312 - thiamine-phosphate diphosphorylase thiE: thiamine-phosphate diphosphorylase~[H] COG0352 Thiamine monophosphate synthase gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3616 M479_3617 M479_3617 thiC thiC 4000299 4002344 - phosphomethylpyrimidine synthase thiC: phosphomethylpyrimidine synthase~[H] COG0422 Thiamine biosynthesis protein ThiC gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3617 M479_3618 M479_3618 M479_3618 4002720 4003229 - regulator of RNA polymerase sigma(70) subunit%2C Rsd/AlgQ family protein [K] COG3160 Regulator of sigma D gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3618 M479_3619 M479_3619 M479_3619 4003326 4004108 + NADH pyrophosphatase zinc ribbon domain protein [L] COG2816 NTP pyrophosphohydrolases containing a Zn-finger%2C probably nucleic-acid-binding gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3619 M479_362 M479_362 M479_362 375396 376292 - hypothetical protein conserved hypothetical protein~[S] COG2431 Predicted membrane protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=M479_362 M479_3620 M479_3620 M479_3620 4004201 4004986 + hypothetical protein gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3620 M479_3621 M479_3621 hemE hemE 4005105 4006172 + uroporphyrinogen decarboxylase hemE: uroporphyrinogen decarboxylase~[H] COG0407 Uroporphyrinogen-III decarboxylase gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3621 M479_3622 M479_3622 nfi nfi 4006238 4006942 + endonuclease V [L] COG1515 Deoxyinosine 3'endonuclease (endonuclease V) gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3622 M479_3623 M479_3623 M479_3623 4006988 4007578 + hypothetical protein conserved hypothetical protein~[S] COG3068 Uncharacterized protein conserved in bacteria gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3623 M479_3624 M479_3624 hupA hupA 4007767 4008042 + DNA-binding protein HU-alpha [L] COG0776 Bacterial nucleoid DNA-binding protein gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3624 M479_3625 M479_3625 M479_3625 4008092 4008745 + hypothetical protein conserved hypothetical protein gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3625 M479_3626 M479_3626 purD purD 4008912 4010198 - phosphoribosylamine--glycine ligase [F] COG0151 Phosphoribosylamine-glycine ligase gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3626 M479_3627 M479_3627 purH purH 4010258 4011847 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~[F] COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3627 M479_3628 M479_3628 M479_3628 4012258 4012377 + hypothetical protein conserved hypothetical protein gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3628 M479_3629 M479_3629 M479_3629 4012513 4014043 + 16S ribosomal RNA rRNA gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3629 M479_363 M479_363 M479_363 376645 378312 + AAA domain protein [L] COG3593 Predicted ATP-dependent endonuclease of the OLD family gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=M479_363 M479_3630 M479_3630 M479_3630 4014151 4014227 + tRNA-Ile tRNA gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3630 M479_3631 M479_3631 M479_3631 4014279 4014354 + tRNA-Ala tRNA gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3631 M479_3632 M479_3632 M479_3632 4014575 4017479 + 23S ribosomal RNA rRNA gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3632 M479_3633 M479_3633 M479_3633 4017591 4017705 + 5S ribosomal RNA rRNA gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3633 M479_3634 M479_3634 M479_3634 4017830 4017906 + tRNA-Asp tRNA gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3634 M479_3635 M479_3635 M479_3635 4017915 4017990 + tRNA-Trp tRNA gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3635 M479_3636 M479_3636 ytfQ ytfQ 4018975 4019931 + ABC transporter periplasmic-binding protein ytfQ [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3636 M479_3637 M479_3637 ccmA ccmA 4020026 4021507 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3637 M479_3638 M479_3638 M479_3638 4021540 4022538 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3638 M479_3639 M479_3639 M479_3639 4023517 4024398 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3639 M479_364 M479_364 M479_364 378449 379396 - hypothetical protein conserved hypothetical protein~[S] COG2990 Uncharacterized protein conserved in bacteria gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=M479_364 M479_3640 M479_3640 M479_3640 4022538 4023530 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3640 M479_3641 M479_3641 M479_3641 4024517 4024855 + hypothetical protein conserved hypothetical protein~[S] COG3085 Uncharacterized protein conserved in bacteria gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3641 M479_3642 M479_3642 M479_3642 4025112 4026635 - sigma-54 interaction domain protein [O] COG0606 Predicted ATPase with chaperone activity gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3642 M479_3643 M479_3643 ilvB ilvB 4027258 4028904 + acetolactate synthase%2C large subunit%2C biosynthetic type acolac_lg: acetolactate synthase%2C large subunit%2C biosynthetic type~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3643 M479_3644 M479_3644 M479_3644 4028901 4029158 + ACT domain protein [S] COG3978 Acetolactate synthase (isozyme II)%2C small (regulatory) subunit gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3644 M479_3645 M479_3645 ilvE ilvE 4029181 4030107 + branched-chain amino acid aminotransferase ilvE_I: branched-chain amino acid aminotransferase~[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3645 M479_3646 M479_3646 ilvD ilvD 4030418 4032268 + dihydroxy-acid dehydratase ilvD: dihydroxy-acid dehydratase~[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3646 M479_3647 M479_3647 ilvA ilvA 4032274 4033818 + threonine ammonia-lyase%2C biosynthetic ilvA_2Cterm: threonine ammonia-lyase%2C biosynthetic~[E] COG1171 Threonine dehydratase gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3647 M479_3648 M479_3648 M479_3648 4033949 4034413 - hypothetical protein conserved hypothetical protein gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3648 M479_3649 M479_3649 M479_3649 4034493 4034954 - hypothetical protein conserved hypothetical protein gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3649 M479_365 M479_365 M479_365 379633 380745 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=M479_365 M479_3650 M479_3650 M479_3650 4034938 4035609 - hypothetical protein conserved hypothetical family protein gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3650 M479_3651 M479_3651 M479_3651 4035702 4035857 - hypothetical protein conserved hypothetical protein gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3651 M479_3652 M479_3652 M479_3652 4036505 4036714 + hypothetical protein conserved hypothetical protein gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3652 M479_3653 M479_3653 M479_3653 4036769 4037650 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3653 M479_3654 M479_3654 ilvC ilvC 4037936 4039414 + ketol-acid reductoisomerase ilvC: ketol-acid reductoisomerase~[EH] COG0059 Ketol-acid reductoisomerase gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3654 M479_3655 M479_3655 M479_3655 4039595 4039795 + colicin/pyocin immunity family domain protein gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3655 M479_3656 M479_3656 M479_3656 4039991 4041433 + S-type Pyocin family protein gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3656 M479_3657 M479_3657 M479_3657 4041433 4041696 + hypothetical protein conserved hypothetical protein gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3657 M479_3658 M479_3658 M479_3658 4041949 4042200 + DNase/tRNase domain of colicin-like bacteriocin family protein gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3658 M479_3659 M479_3659 imm imm 4042202 4042459 + colicin-E9 immunity protein gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3659 M479_366 M479_366 M479_366 380745 382694 + ABC transporter family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=M479_366 M479_3660 M479_3660 M479_3660 4043094 4043912 - hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3660 M479_3661 M479_3661 M479_3661 4043878 4045245 - fimbrial family protein gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3661 M479_3662 M479_3662 M479_3662 4045262 4047889 - hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3662 M479_3663 M479_3663 M479_3663 4047917 4048648 - hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3663 M479_3664 M479_3664 M479_3664 4048712 4049242 - putative fimbrial protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3664 M479_3665 M479_3665 M479_3665 4050034 4050825 - glutamine cyclotransferase family protein [O] COG3823 Glutamine cyclotransferase gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3665 M479_3666 M479_3666 M479_3666 4051064 4051345 - PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3666 M479_3667 M479_3667 rep rep 4051549 4053570 + ATP-dependent DNA helicase Rep rep: ATP-dependent DNA helicase Rep~[L] COG0210 Superfamily I DNA and RNA helicases gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3667 M479_3668 M479_3668 M479_3668 4053738 4055231 - ppx/GppA phosphatase family protein [FP] COG0248 Exopolyphosphatase gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3668 M479_3669 M479_3669 M479_3669 4055238 4056524 - DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3669 M479_367 M479_367 cspD cspD 382958 383221 - cold shock domain protein CspD cspD: cold shock domain protein CspD~[K] COG1278 Cold shock proteins gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=M479_367 M479_3670 M479_3670 trxA trxA 4056643 4056969 + thioredoxin thioredoxin: thioredoxin~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3670 M479_3671 M479_3671 rho rho 4057449 4058708 + transcription termination factor Rho rho: transcription termination factor Rho~[K] COG1158 Transcription termination factor gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3671 M479_3672 M479_3672 wecA wecA 4059243 4060340 + undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase~[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3672 M479_3673 M479_3673 M479_3673 4060376 4061437 + chain length determinant family protein [M] COG3765 Chain length determinant protein gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3673 M479_3674 M479_3674 M479_3674 4061769 4062899 + UDP-N-acetylglucosamine 2-epimerase wecB: UDP-N-acetylglucosamine 2-epimerase~[M] COG0381 UDP-N-acetylglucosamine 2-epimerase gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3674 M479_3675 M479_3675 M479_3675 4062896 4064158 + nucleotide sugar dehydrogenase family protein NDP-sugDHase: nucleotide sugar dehydrogenase family protein~[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3675 M479_3676 M479_3676 rfbB rfbB 4064155 4065222 + dTDP-glucose 4%2C6-dehydratase dTDP_gluc_dehyt: dTDP-glucose 4%2C6-dehydratase~[M] COG1088 dTDP-D-glucose 4%2C6-dehydratase gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3676 M479_3677 M479_3677 rfbA rfbA 4065500 4066381 + glucose-1-phosphate thymidylyltransferase rmlA: glucose-1-phosphate thymidylyltransferase~[M] COG1209 dTDP-glucose pyrophosphorylase gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3677 M479_3678 M479_3678 wecD wecD 4066359 4067096 + TDP-D-fucosamine acetyltransferase wecD_rffC: TDP-D-fucosamine acetyltransferase~[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3678 M479_3679 M479_3679 wecE wecE 4067098 4068228 + TDP-4-keto-6-deoxy-D-glucose transaminase family protein ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase family protein~[M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3679 M479_368 M479_368 M479_368 383582 383902 + ATP-dependent Clp protease adaptor ClpS family protein [S] COG2127 Uncharacterized conserved protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=M479_368 M479_3680 M479_3680 M479_3680 4068230 4069486 + polysaccharide biosynthesis family protein [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3680 M479_3681 M479_3681 M479_3681 4069509 4070594 + 4-alpha-L-fucosyltransferase glycosyl transferase group 56 family protein gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3681 M479_3682 M479_3682 M479_3682 4070591 4071955 + wzyE family protein gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3682 M479_3683 M479_3683 M479_3683 4071964 4072704 + glycosyltransferase%2C WecB/TagA/CpsF family protein wecG_tagA_cpsF: glycosyltransferase%2C WecB/TagA/CpsF family protein~[M] COG1922 Teichoic acid biosynthesis proteins gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3683 M479_3684 M479_3684 M479_3684 4073228 4074619 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3684 M479_3685 M479_3685 M479_3685 4074768 4074844 + tRNA-Arg tRNA gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3685 M479_3686 M479_3686 M479_3686 4074928 4075003 + tRNA-His tRNA gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3686 M479_3688 M479_3688 M479_3688 4075020 4075106 + tRNA-Leu tRNA gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3688 M479_3689 M479_3689 M479_3689 4075182 4075258 + tRNA-Pro tRNA gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3689 M479_369 M479_369 clpA clpA 383928 386204 + ATP-dependent Clp protease ATP-binding subunit ClpA clpA: ATP-dependent Clp protease ATP-binding subunit ClpA~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=M479_369 M479_3690 M479_3690 M479_3690 4076125 4076583 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3690 M479_3691 M479_3691 M479_3691 4076776 4077996 - hemY family protein [H] COG3071 Uncharacterized enzyme of heme biosynthesis gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3691 M479_3692 M479_3692 M479_3692 4077999 4079123 - hemX family protein [H] COG2959 Uncharacterized enzyme of heme biosynthesis gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3692 M479_3693 M479_3693 M479_3693 4079154 4079903 - uroporphyrinogen-III synthase HemD family protein [H] COG1587 Uroporphyrinogen-III synthase gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3693 M479_3694 M479_3694 hemC hemC 4079900 4080841 - hydroxymethylbilane synthase hemC: hydroxymethylbilane synthase~[H] COG0181 Porphobilinogen deaminase gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3694 M479_3695 M479_3695 M479_3695 4081335 4083887 + adenylate cyclase%2C class-I family protein [F] COG3072 Adenylate cyclase gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3695 M479_3696 M479_3696 cyaY cyaY 4084131 4084451 - iron donor protein CyaY feS_CyaY: iron donor protein CyaY~[P] COG1965 Protein implicated in iron transport%2C frataxin homolog gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3696 M479_3697 M479_3697 M479_3697 4084603 4084791 + prokaryotic lipo-attachment site family protein [N] COG5567 Predicted small periplasmic lipoprotein gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3697 M479_3698 M479_3698 dapF dapF 4084975 4085799 + diaminopimelate epimerase dapF: diaminopimelate epimerase~[E] COG0253 Diaminopimelate epimerase gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3698 M479_3699 M479_3699 M479_3699 4085864 4086568 + hypothetical protein conserved hypothetical protein~[S] COG3159 Uncharacterized protein conserved in bacteria gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3699 M479_37 M479_37 rlmH rlmH 43286 43756 - rRNA large subunit m3Psi methyltransferase RlmH tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH~[S] COG1576 Uncharacterized conserved protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=M479_37 M479_370 M479_370 M479_370 386497 386955 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=M479_370 M479_3700 M479_3700 xerC xerC 4086565 4087476 + tyrosine recombinase XerC recomb_XerC: tyrosine recombinase XerC~[L] COG4973 Site-specific recombinase XerC gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3700 M479_3701 M479_3701 M479_3701 4087476 4088192 + HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3701 M479_3702 M479_3702 uvrD uvrD 4088294 4090456 + DNA helicase II uvrD: DNA helicase II~[L] COG0210 Superfamily I DNA and RNA helicases gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3702 M479_3703 M479_3703 M479_3703 4090570 4091256 - bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3703 M479_3704 M479_3704 M479_3704 4091684 4092901 + hypothetical protein conserved hypothetical protein~[S] COG5441 Uncharacterized conserved protein gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3704 M479_3705 M479_3705 M479_3705 4092927 4093757 + nitronate monooxygenase family protein [R] COG5564 Predicted TIM-barrel enzyme%2C possibly a dioxygenase gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3705 M479_3706 M479_3706 corA corA 4094406 4095356 + magnesium and cobalt transport protein CorA corA: magnesium and cobalt transport protein CorA~[P] COG0598 Mg2+ and Co2+ transporters gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3706 M479_3707 M479_3707 M479_3707 4095454 4096344 - eamA-like transporter family protein [R] COG2962 Predicted permeases gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3707 M479_3708 M479_3708 M479_3708 4096431 4096901 - hypothetical protein conserved hypothetical protein~[Q] COG2050 Uncharacterized protein%2C possibly involved in aromatic compounds catabolism gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3708 M479_3709 M479_3709 pldA pldA 4097123 4098001 + phospholipase A1 [M] COG2829 Outer membrane phospholipase A gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3709 M479_371 M479_371 infA infA 387327 387545 - translation initiation factor IF-1 infA: translation initiation factor IF-1~[J] COG0361 Translation initiation factor 1 (IF-1) gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=M479_371 M479_3710 M479_3710 recQ recQ 4098079 4099911 + ATP-dependent DNA helicase RecQ recQ: ATP-dependent DNA helicase RecQ~[L] COG0514 Superfamily II DNA helicase gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3710 M479_3711 M479_3711 M479_3711 4100018 4100638 + homoserine/Threonine efflux family protein 2A76: homoserine/Threonine efflux family protein~[E] COG1280 Putative threonine efflux protein gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3711 M479_3712 M479_3712 rhtB rhtB 4100689 4101309 - homoserine/homoserine lactone efflux protein [E] COG1280 Putative threonine efflux protein gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3712 M479_3713 M479_3713 M479_3713 4101523 4102518 + prolyl oligopeptidase family protein [I] COG2267 Lysophospholipase gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3713 M479_3714 M479_3714 M479_3714 4102553 4103362 + HAD hydrolase%2C IIB family protein HAD-SF-IIB: HAD hydrolase%2C IIB family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3714 M479_3715 M479_3715 M479_3715 4103639 4104838 + viral enhancin family protein gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3715 M479_3716 M479_3716 M479_3716 4104912 4106027 - glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3716 M479_3717 M479_3717 glpA glpA 4106652 4108307 + glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit~[C] COG0578 Glycerol-3-phosphate dehydrogenase gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3717 M479_3718 M479_3718 glpB glpB 4108297 4109571 + glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit~[E] COG3075 Anaerobic glycerol-3-phosphate dehydrogenase gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3718 M479_3719 M479_3719 glpC glpC 4109697 4110863 + glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit~[C] COG0247 Fe-S oxidoreductase gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3719 M479_372 M479_372 aat aat 387711 388421 - leucyl/phenylalanyl-tRNA--protein transferase aat: leucyl/phenylalanyl-tRNA--protein transferase~[O] COG2360 Leu/Phe-tRNA-protein transferase gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=M479_372 M479_3720 M479_3720 M479_3720 4111025 4111468 - putative lipoprotein gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3720 M479_3721 M479_3721 M479_3721 4111682 4112350 - hypothetical protein conserved hypothetical integral membrane family protein~[S] COG1738 Uncharacterized conserved protein gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3721 M479_3722 M479_3722 M479_3722 4112634 4112888 + sulfurtransferase TusA family protein [O] COG0425 Predicted redox protein%2C regulator of disulfide bond formation gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3722 M479_3723 M479_3723 cadA cadA 4112988 4115354 - cadmium-translocating P-type ATPase ATPase-IB2_Cd: cadmium-translocating P-type ATPase~[P] COG2217 Cation transport ATPase gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3723 M479_3724 M479_3724 M479_3724 4115768 4116394 - yhhN-like family protein [S] COG3714 Predicted membrane protein gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3724 M479_3725 M479_3725 M479_3725 4116684 4117004 + hypothetical protein conserved hypothetical protein~[S] COG4517 Uncharacterized protein conserved in bacteria gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3725 M479_3726 M479_3726 M479_3726 4117216 4117635 + hypothetical protein conserved hypothetical protein gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3726 M479_3727 M479_3727 M479_3727 4117822 4118094 - hypothetical protein conserved hypothetical protein~[S] COG3776 Predicted membrane protein gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3727 M479_3728 M479_3728 rsmD rsmD 4118084 4118746 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [L] COG0742 N6-adenine-specific methylase gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3728 M479_3729 M479_3729 ftsY ftsY 4119028 4120689 + signal recognition particle-docking protein FtsY ftsY: signal recognition particle-docking protein FtsY~[U] COG0552 Signal recognition particle GTPase gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3729 M479_373 M479_373 cydC cydC 388640 390364 - thiol reductant ABC exporter%2C CydC subunit cydC: thiol reductant ABC exporter%2C CydC subunit~[CO] COG4987 ABC-type transport system involved in cytochrome bd biosynthesis%2C fused ATPase and permease components gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=M479_373 M479_3730 M479_3730 ftsE ftsE 4120695 4121363 + cell division ATP-binding protein FtsE ftsE: cell division ATP-binding protein FtsE~[D] COG2884 Predicted ATPase involved in cell division gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3730 M479_3731 M479_3731 ftsX ftsX 4121353 4122306 + putative protein insertion permease FtsX ftsX: putative protein insertion permease FtsX~[D] COG2177 Cell division protein gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3731 M479_3732 M479_3732 rpoH rpoH 4122617 4123474 + alternative sigma factor RpoH rpoH_proteo: alternative sigma factor RpoH~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3732 M479_3733 M479_3733 M479_3733 4123688 4124146 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3733 M479_3734 M479_3734 M479_3734 4124392 4124784 - acetyltransferase domain protein gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3734 M479_3735 M479_3735 M479_3735 4125206 4126321 + receptor ligand binding region family protein [E] COG0683 ABC-type branched-chain amino acid transport systems%2C periplasmic component gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3735 M479_3736 M479_3736 M479_3736 4126502 4127428 + branched-chain amino acid transport system / permease component family protein [E] COG0559 Branched-chain amino acid ABC-type transport system%2C permease components gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3736 M479_3737 M479_3737 M479_3737 4127425 4128711 + branched-chain amino acid transport system / permease component family protein [E] COG4177 ABC-type branched-chain amino acid transport system%2C permease component gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3737 M479_3738 M479_3738 M479_3738 4128708 4129475 + ABC transporter family protein [E] COG0411 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3738 M479_3739 M479_3739 livF livF 4129520 4130221 + high-affinity branched-chain amino acid transport ATP-binding protein LivF [E] COG0410 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3739 M479_374 M479_374 cydD cydD 390367 392133 - thiol reductant ABC exporter%2C CydD subunit cydD: thiol reductant ABC exporter%2C CydD subunit~[CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis%2C ATPase and permease components gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=M479_374 M479_3740 M479_3740 M479_3740 4130452 4130910 + hypothetical protein conserved hypothetical protein gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3740 M479_3741 M479_3741 M479_3741 4131025 4132131 - putative exported protein gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3741 M479_3742 M479_3742 M479_3742 4132237 4132755 - putative exported protein gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3742 M479_3743 M479_3743 M479_3743 4132817 4133464 - hypothetical protein conserved hypothetical protein gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3743 M479_3744 M479_3744 M479_3744 4133436 4134122 - hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3744 M479_3745 M479_3745 M479_3745 4134140 4136473 - hypothetical protein conserved hypothetical protein gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3745 M479_3746 M479_3746 M479_3746 4136740 4137231 - CS1 type fimbrial major subunit gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3746 M479_3747 M479_3747 M479_3747 4137786 4139105 + bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3747 M479_3748 M479_3748 M479_3748 4139403 4140290 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3748 M479_3749 M479_3749 M479_3749 4140287 4141132 + binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3749 M479_375 M479_375 trxB trxB 392592 393554 - thioredoxin-disulfide reductase TRX_reduct: thioredoxin-disulfide reductase~[O] COG0492 Thioredoxin reductase gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=M479_375 M479_3750 M479_3750 ugpC ugpC 4141139 4142212 + sn-glycerol-3-phosphate import ATP-binding protein UgpC [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3750 M479_3751 M479_3751 M479_3751 4142209 4142958 + glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3751 M479_3752 M479_3752 M479_3752 4143059 4144015 + membrane transport family protein [R] COG0679 Predicted permeases gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3752 M479_3753 M479_3753 M479_3753 4145155 4146108 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3753 M479_3754 M479_3754 yedA yedA 4144368 4145267 + carboxylate/amino acid/amine transporter family protein 2A78: carboxylate/amino acid/amine transporter family protein~[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3754 M479_3755 M479_3755 metE metE 4146214 4148490 + 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~[E] COG0620 Methionine synthase II (cobalamin-independent) gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3755 M479_3756 M479_3756 M479_3756 4148545 4149417 - chlorophyllase enzyme family protein [Q] COG0412 Dienelactone hydrolase and related enzymes gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3756 M479_3757 M479_3757 udp udp 4149845 4150606 + uridine phosphorylase uridine-psphlse: uridine phosphorylase~[F] COG2820 Uridine phosphorylase gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3757 M479_3758 M479_3758 M479_3758 4150733 4151557 + tyrosine phosphatase family protein [T] COG2365 Protein tyrosine/serine phosphatase gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3758 M479_3759 M479_3759 M479_3759 4151921 4153732 + carbon starvation CstA family protein [T] COG1966 Carbon starvation protein%2C predicted membrane protein gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3759 M479_376 M479_376 lrp lrp 394321 394815 + leucine-responsive regulatory protein [K] COG1522 Transcriptional regulators gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=M479_376 M479_3760 M479_3760 M479_3760 4154004 4154534 + hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3760 M479_3761 M479_3761 M479_3761 4154742 4156247 + rmuC family protein [S] COG1322 Uncharacterized protein conserved in bacteria gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3761 M479_3762 M479_3762 ubiE ubiE 4156339 4157094 + ubiquinone/menaquinone biosynthesis methyltransferase ubiE [H] COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3762 M479_3763 M479_3763 M479_3763 4157108 4157758 + SCP-2 sterol transfer family protein [S] COG3165 Uncharacterized protein conserved in bacteria gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3763 M479_3764 M479_3764 ubiB ubiB 4157758 4159389 + 2-polyprenylphenol 6-hydroxylase ubiB: 2-polyprenylphenol 6-hydroxylase~[R] COG0661 Predicted unusual protein kinase gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3764 M479_3765 M479_3765 tatA tatA 4159569 4159835 + twin arginine-targeting translocase%2C TatA/E family protein tatAE: twin arginine-targeting translocase%2C TatA/E family protein~[U] COG1826 Sec-independent protein secretion pathway components gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3765 M479_3766 M479_3766 tatB tatB 4159839 4160501 + twin arginine-targeting protein translocase TatB tatB: twin arginine-targeting protein translocase TatB~[U] COG1826 Sec-independent protein secretion pathway components gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3766 M479_3767 M479_3767 tatC tatC 4160504 4161280 + twin arginine-targeting protein translocase TatC tatC: twin arginine-targeting protein translocase TatC~[U] COG0805 Sec-independent protein secretion pathway component TatC gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3767 M479_3768 M479_3768 M479_3768 4161336 4162118 + tatD related DNase family protein [L] COG0084 Mg-dependent DNase gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3768 M479_3769 M479_3769 M479_3769 4162133 4163155 + delta-aminolevulinic acid dehydratase family protein [H] COG0113 Delta-aminolevulinic acid dehydratase gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3769 M479_377 M479_377 M479_377 394938 398837 + ftsK/SpoIIIE family protein [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=M479_377 M479_3770 M479_3770 rfaH rfaH 4163265 4163753 - transcription elongation factor/antiterminator RfaH rfaH: transcription elongation factor/antiterminator RfaH~[K] COG0250 Transcription antiterminator gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3770 M479_3771 M479_3771 M479_3771 4164001 4165497 + decarboxylase%2C UbiD family protein [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3771 M479_3772 M479_3772 M479_3772 4165552 4166253 + oxidoreductase NAD-binding domain protein [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3772 M479_3773 M479_3773 fadA fadA 4166413 4167576 - acetyl-CoA C-acyltransferase FadA fadA: acetyl-CoA C-acyltransferase FadA~[I] COG0183 Acetyl-CoA acetyltransferase gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3773 M479_3774 M479_3774 fadB fadB 4167588 4169777 - fatty oxidation complex%2C alpha subunit FadB fadB: fatty oxidation complex%2C alpha subunit FadB~[I] COG1250 3-hydroxyacyl-CoA dehydrogenase gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3774 M479_3775 M479_3775 M479_3775 4170104 4171435 + metallopeptidase M24 family protein [E] COG0006 Xaa-Pro aminopeptidase gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3775 M479_3776 M479_3776 M479_3776 4171435 4172046 + hypothetical protein conserved hypothetical protein~[S] COG1739 Uncharacterized conserved protein gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3776 M479_3777 M479_3777 M479_3777 4172086 4173537 + potassium uptake%2C TrkH family protein 2a38: potassium uptake%2C TrkH family protein~[P] COG0168 Trk-type K+ transport systems%2C membrane components gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3777 M479_3778 M479_3778 M479_3778 4173559 4174092 + flavodoxin domain protein [CH] COG4635 Flavodoxin gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3778 M479_3779 M479_3779 M479_3779 4174574 4176104 + 16S ribosomal RNA rRNA gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3779 M479_378 M479_378 lolA lolA 399030 399638 + outer membrane lipocarrier protein LolA lolA: outer membrane lipocarrier protein LolA~[M] COG2834 Outer membrane lipoprotein-sorting protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=M479_378 M479_3780 M479_3780 M479_3780 4176212 4176288 + tRNA-Ile tRNA gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3780 M479_3781 M479_3781 M479_3781 4176340 4176415 + tRNA-Ala tRNA gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3781 M479_3782 M479_3782 M479_3782 4176636 4179540 + 23S ribosomal RNA rRNA gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3782 M479_3783 M479_3783 M479_3783 4179652 4179767 + 5S ribosomal RNA rRNA gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3783 M479_3784 M479_3784 murB murB 4180230 4181267 + UDP-N-acetylenolpyruvoylglucosamine reductase murB: UDP-N-acetylenolpyruvoylglucosamine reductase~[M] COG0812 UDP-N-acetylmuramate dehydrogenase gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3784 M479_3785 M479_3785 M479_3785 4181264 4182223 + biotin operon repressor birA_repr_reg: biotin operon repressor~[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3785 M479_3786 M479_3786 coaA coaA 4182258 4183208 - pantothenate kinase panK_bact: pantothenate kinase~[H] COG1072 Panthothenate kinase gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3786 M479_3787 M479_3787 M479_3787 4183419 4183970 - acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3787 M479_3788 M479_3788 M479_3788 4184060 4185082 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3788 M479_3789 M479_3789 M479_3789 4185082 4185861 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3789 M479_379 M479_379 M479_379 400948 401082 - hypothetical protein conserved hypothetical protein gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=M479_379 M479_3790 M479_3790 M479_3790 4185900 4186643 + dienelactone hydrolase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3790 M479_3791 M479_3791 M479_3791 4186718 4186996 + hypothetical protein conserved hypothetical protein gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3791 M479_3792 M479_3792 rpsF rpsF 4187010 4187402 + ribosomal protein S6 S6: ribosomal protein S6~[J] COG0360 Ribosomal protein S6 gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3792 M479_3793 M479_3793 rpsR rpsR 4187733 4187960 + ribosomal protein S18 S18: ribosomal protein S18~[J] COG0238 Ribosomal protein S18 gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3793 M479_3794 M479_3794 rplI rplI 4188000 4188452 + ribosomal protein L9 L9: ribosomal protein L9~[J] COG0359 Ribosomal protein L9 gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3794 M479_3795 M479_3795 M479_3795 4188648 4189106 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3795 M479_3796 M479_3796 M479_3796 4189228 4189683 - hypothetical protein conserved hypothetical protein gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3796 M479_3797 M479_3797 M479_3797 4189823 4190563 - hypothetical protein opacity-associated A N-terminal motif family protein~[M] COG3061 Cell envelope opacity-associated protein A gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3797 M479_3798 M479_3798 M479_3798 4190936 4191556 + domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3798 M479_3799 M479_3799 ric ric 4191654 4192319 - iron-sulfur cluster repair di-iron protein feS_repair_RIC: iron-sulfur cluster repair di-iron protein~[D] COG2846 Regulator of cell morphogenesis and NO signaling gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3799 M479_38 M479_38 rsfS rsfS 43760 44077 - ribosome silencing factor rsfS_iojap_ybeB: ribosome silencing factor~[S] COG0799 Uncharacterized homolog of plant Iojap protein gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=M479_38 M479_380 M479_380 M479_380 399658 400992 + sigma-54 interaction domain protein [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=M479_380 M479_3800 M479_3800 cpdB cpdB 4192474 4194432 - 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase cycNucDiestase: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3800 M479_3801 M479_3801 cysQ cysQ 4194879 4195619 + 3'(2')%2C5'-bisphosphate nucleotidase bisphos_cysQ: 3'(2')%2C5'-bisphosphate nucleotidase~[P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3801 M479_3802 M479_3802 M479_3802 4195622 4196185 - hypothetical protein conserved hypothetical protein~[R] COG3054 Predicted transcriptional regulator gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3802 M479_3803 M479_3803 M479_3803 4196521 4196733 + hypothetical protein conserved hypothetical protein gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3803 M479_3804 M479_3804 M479_3804 4196841 4198172 - CBS domain protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3804 M479_3805 M479_3805 msrA msrA 4198431 4199069 - peptide-methionine (S)-S-oxide reductase msrA: peptide-methionine (S)-S-oxide reductase~[O] COG0225 Peptide methionine sulfoxide reductase gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3805 M479_3806 M479_3806 M479_3806 4199344 4201080 + surface antigen variable number repeat family protein [M] COG0729 Outer membrane protein gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3806 M479_3807 M479_3807 M479_3807 4201077 4204973 + hypothetical protein conserved hypothetical protein~[S] COG2911 Uncharacterized protein conserved in bacteria gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3807 M479_3808 M479_3808 M479_3808 4204976 4205332 + AIG2-like family protein [S] COG2105 Uncharacterized conserved protein gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3808 M479_3809 M479_3809 ppa ppa 4205450 4205977 - inorganic pyrophosphatase [C] COG0221 Inorganic pyrophosphatase gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3809 M479_381 M479_381 serS serS 401234 402526 + serine--tRNA ligase serS: serine--tRNA ligase~[J] COG0172 Seryl-tRNA synthetase gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=M479_381 M479_3810 M479_3810 M479_3810 4206177 4207190 - fructose-1-6-bisphosphatase family protein [G] COG0158 Fructose-1%2C6-bisphosphatase gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3810 M479_3811 M479_3811 mpl mpl 4207361 4208743 + L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase~mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase~[M] COG0773 UDP-N-acetylmuramate-alanine ligase gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3811 M479_3812 M479_3812 M479_3812 4209039 4209302 - hypothetical protein conserved hypothetical protein gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3812 M479_3813 M479_3813 argR argR 4209691 4210161 - arginine repressor argR_whole: arginine repressor~[K] COG1438 Arginine repressor gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3813 M479_3814 M479_3814 mdh mdh 4210625 4211563 + malate dehydrogenase%2C NAD-dependent MDH_euk_gproteo: malate dehydrogenase%2C NAD-dependent~[C] COG0039 Malate/lactate dehydrogenases gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3814 M479_3815 M479_3815 M479_3815 4211997 4212272 - winged helix-turn-helix DNA-binding family protein [K] COG3423 Predicted transcriptional regulator gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3815 M479_3816 M479_3816 M479_3816 4212456 4212803 + mu DNA-binding domain protein [K] COG2932 Predicted transcriptional regulator gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3816 M479_3817 M479_3817 M479_3817 4212900 4213871 - polyprenyl synthetase family protein [H] COG0142 Geranylgeranyl pyrophosphate synthase gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3817 M479_3818 M479_3818 rplU rplU 4214131 4214442 + ribosomal protein L21 L21: ribosomal protein L21~[J] COG0261 Ribosomal protein L21 gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3818 M479_3819 M479_3819 rpmA rpmA 4214462 4214719 + ribosomal protein L27 L27: ribosomal protein L27~[J] COG0211 Ribosomal protein L27 gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3819 M479_382 M479_382 M479_382 402757 403905 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=M479_382 M479_3820 M479_3820 M479_3820 4214807 4215793 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3820 M479_3821 M479_3821 cgtA cgtA 4215794 4216966 + Obg family GTPase CgtA obg_CgtA: Obg family GTPase CgtA~[R] COG0536 Predicted GTPase gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3821 M479_3822 M479_3822 M479_3822 4217061 4218128 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3822 M479_3823 M479_3823 M479_3823 4218125 4218787 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3823 M479_3824 M479_3824 dacB dacB 4218793 4220241 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3824 M479_3825 M479_3825 greA greA 4220499 4220975 + transcription elongation factor greA [K] COG0782 Transcription elongation factor gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3825 M479_3826 M479_3826 yhbY yhbY 4221103 4221396 - RNA-binding protein YhbY [J] COG1534 Predicted RNA-binding protein containing KH domain%2C possibly ribosomal protein gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3826 M479_3827 M479_3827 rrmJ rrmJ 4221543 4222172 + ribosomal RNA large subunit methyltransferase J rrmJ: ribosomal RNA large subunit methyltransferase J~[J] COG0293 23S rRNA methylase gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3827 M479_3828 M479_3828 ftsH ftsH 4222229 4224163 + ATP-dependent zinc metalloprotease FtsH [O] COG0465 ATP-dependent Zn proteases gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3828 M479_3829 M479_3829 folP folP 4224283 4225116 + dihydropteroate synthase DHPS: dihydropteroate synthase~[H] COG0294 Dihydropteroate synthase and related enzymes gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3829 M479_383 M479_383 pflA pflA 404059 404793 - pyruvate formate-lyase 1-activating enzyme PFLA: pyruvate formate-lyase 1-activating enzyme~[O] COG1180 Pyruvate-formate lyase-activating enzyme gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=M479_383 M479_3830 M479_3830 glmM glmM 4225126 4226466 + phosphoglucosamine mutase glmM: phosphoglucosamine mutase~[G] COG1109 Phosphomannomutase gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3830 M479_3831 M479_3831 secG secG 4226689 4227024 + preprotein translocase%2C SecG subunit secG: preprotein translocase%2C SecG subunit~[U] COG1314 Preprotein translocase subunit SecG gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3831 M479_3832 M479_3832 M479_3832 4227117 4227203 + tRNA-Leu tRNA gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3832 M479_3833 M479_3833 M479_3833 4227264 4227340 + tRNA-Met tRNA gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3833 M479_3834 M479_3834 rimP rimP 4227556 4228008 + ribosome maturation factor rimP [S] COG0779 Uncharacterized protein conserved in bacteria gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3834 M479_3835 M479_3835 nusA nusA 4228030 4229517 + transcription elongation protein nusA [K] COG0195 Transcription elongation factor gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3835 M479_3836 M479_3836 infB infB 4229542 4232220 + translation initiation factor IF-2 IF-2: translation initiation factor IF-2~[J] COG0532 Translation initiation factor 2 (IF-2%3B GTPase) gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3836 M479_3837 M479_3837 rbfA rbfA 4232286 4232696 + ribosome-binding factor A rbfA: ribosome-binding factor A~[J] COG0858 Ribosome-binding factor A gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3837 M479_3838 M479_3838 truB truB 4232696 4233670 + tRNA pseudouridine(55) synthase truB: tRNA pseudouridine(55) synthase~[J] COG0130 Pseudouridine synthase gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3838 M479_3839 M479_3839 rpsO rpsO 4233793 4234062 + ribosomal protein S15 S15_bact: ribosomal protein S15~[J] COG0184 Ribosomal protein S15P/S13E gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3839 M479_384 M479_384 M479_384 405780 406454 + glycosyltransferase 25 family protein [M] COG3306 Glycosyltransferase involved in LPS biosynthesis gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=M479_384 M479_3840 M479_3840 M479_3840 4234125 4234910 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3840 M479_3841 M479_3841 M479_3841 4234964 4235479 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3841 M479_3842 M479_3842 M479_3842 4236221 4238857 - phosphoenolpyruvate carboxylase family protein [C] COG2352 Phosphoenolpyruvate carboxylase gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3842 M479_3843 M479_3843 argE argE 4239231 4240394 - acetylornithine deacetylase acOrn-deacetyl: acetylornithine deacetylase~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3843 M479_3844 M479_3844 argC argC 4240645 4241649 + N-acetyl-gamma-glutamyl-phosphate reductase argC: N-acetyl-gamma-glutamyl-phosphate reductase~[E] COG0002 Acetylglutamate semialdehyde dehydrogenase gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3844 M479_3845 M479_3845 argB argB 4241818 4242591 + acetylglutamate kinase argB: acetylglutamate kinase~[E] COG0548 Acetylglutamate kinase gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3845 M479_3846 M479_3846 argH argH 4242758 4244131 + argininosuccinate lyase argH: argininosuccinate lyase~[E] COG0165 Argininosuccinate lyase gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3846 M479_3847 M479_3847 M479_3847 4244294 4244419 - hypothetical protein conserved hypothetical protein gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3847 M479_3848 M479_3848 hasR hasR 4244730 4247222 + hasR protein [P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3848 M479_3849 M479_3849 M479_3849 4247444 4248061 + heme-binding A family protein gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3849 M479_385 M479_385 pflB pflB 406572 408854 - formate acetyltransferase pyr_form_ly_1: formate acetyltransferase~[C] COG1882 Pyruvate-formate lyase gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=M479_385 M479_3850 M479_3850 M479_3850 4248227 4250035 + type I secretion system ATPase family protein type_I_sec_PrtD: type I secretion system ATPase family protein~[R] COG4618 ABC-type protease/lipase transport system%2C ATPase and permease components gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3850 M479_3851 M479_3851 M479_3851 4250111 4251439 + type I secretion membrane fusion%2C HlyD family protein type_I_hlyD: type I secretion membrane fusion%2C HlyD family protein~[M] COG0845 Membrane-fusion protein gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3851 M479_3852 M479_3852 M479_3852 4251504 4252307 + hypothetical protein tonB_Cterm: TonB family C-terminal domain protein~[M] COG0810 Periplasmic protein TonB%2C links inner and outer membranes gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3852 M479_3853 M479_3853 M479_3853 4252423 4253886 - glucose inhibited division A family protein [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3853 M479_3854 M479_3854 M479_3854 4253981 4254712 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0678 Peroxiredoxin gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3854 M479_3855 M479_3855 M479_3855 4255759 4257159 - pyridine nucleotide-disulfide oxidoreductase family protein [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3855 M479_3856 M479_3856 M479_3856 4254859 4255776 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3856 M479_3857 M479_3857 M479_3857 4257249 4257344 + hypothetical protein conserved hypothetical protein gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3857 M479_3858 M479_3858 fabR fabR 4257377 4258012 + HTH-type transcriptional repressor fabR [K] COG1309 Transcriptional regulator gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3858 M479_3859 M479_3859 yijD yijD 4258025 4258432 + inner membrane protein yijD gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3859 M479_386 M479_386 focA focA 408910 409767 - formate transporter FocA formate_focA: formate transporter FocA~[P] COG2116 Formate/nitrite family of transporters gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=M479_386 M479_3860 M479_3860 trmA trmA 4258566 4259669 - tRNA (uracil(54)-C(5))-methyltransferase trmA_only: tRNA (uracil(54)-C(5))-methyltransferase~[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3860 M479_3861 M479_3861 btuB btuB 4260149 4262026 + TonB-dependent vitamin B12 receptor tonB-B12: TonB-dependent vitamin B12 receptor~[H] COG4206 Outer membrane cobalamin receptor protein gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3861 M479_3862 M479_3862 murI murI 4261971 4262834 + glutamate racemase glut_race: glutamate racemase~[M] COG0796 Glutamate racemase gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3862 M479_3863 M479_3863 M479_3863 4263298 4264828 + 16S ribosomal RNA rRNA gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3863 M479_3864 M479_3864 M479_3864 4264970 4265045 + tRNA-Glu tRNA gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3864 M479_3865 M479_3865 M479_3865 4265300 4268205 + 23S ribosomal RNA rRNA gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3865 M479_3867 M479_3867 M479_3867 4268317 4268431 + 5S ribosomal RNA rRNA gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3867 M479_3868 M479_3868 M479_3868 4268818 4269159 - hypothetical protein conserved hypothetical protein~[R] COG5544 Predicted periplasmic lipoprotein gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3868 M479_3869 M479_3869 M479_3869 4269221 4270576 - phospholipase D family protein [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3869 M479_387 M479_387 M479_387 410465 412231 - ycaO-type kinase domain protein [S] COG1944 Uncharacterized conserved protein gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=M479_387 M479_3870 M479_3870 M479_3870 4270752 4273394 - acetyltransferase family protein [C] COG1042 Acyl-CoA synthetase (NDP forming) gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3870 M479_3871 M479_3871 M479_3871 4273437 4274186 - DTW domain protein [S] COG3148 Uncharacterized conserved protein gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3871 M479_3872 M479_3872 trxA trxA 4274356 4274793 - thioredoxin thioredoxin: thioredoxin~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3872 M479_3873 M479_3873 M479_3873 4275045 4276211 + RNA 2'-O ribose methyltransferase substrate binding family protein [J] COG0566 rRNA methylases gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3873 M479_3874 M479_3874 M479_3874 4276334 4277869 - drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein efflux_EmrB: drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3874 M479_3875 M479_3875 M479_3875 4277908 4279080 - efflux pump membrane family protein 8a0101: efflux pump membrane family protein~[V] COG1566 Multidrug resistance efflux pump gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3875 M479_3876 M479_3876 M479_3876 4279464 4279976 - winged helix DNA-binding domain protein [K] COG1846 Transcriptional regulators gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3876 M479_3877 M479_3877 M479_3877 4280148 4280489 - branched-chain amino acid transport family protein gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3877 M479_3878 M479_3878 ygaZ ygaZ 4280486 4281259 - inner membrane protein YgaZ [E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3878 M479_3879 M479_3879 M479_3879 4281419 4282618 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3879 M479_388 M479_388 M479_388 412380 413417 + L-asparaginase%2C type II family protein asnASE_II: L-asparaginase%2C type II family protein~[EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=M479_388 M479_3880 M479_3880 M479_3880 4282846 4283232 - hypothetical protein conserved hypothetical protein gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3880 M479_3881 M479_3881 M479_3881 4283342 4284739 - amidohydrolase%2C AtzE family protein amido_AtzE: amidohydrolase%2C AtzE family protein~[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3881 M479_3882 M479_3882 M479_3882 4284736 4284939 - hypothetical protein conserved hypothetical protein gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3882 M479_3883 M479_3883 M479_3883 4285249 4286082 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3883 M479_3884 M479_3884 M479_3884 4286410 4287198 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3884 M479_3885 M479_3885 M479_3885 4287211 4287879 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3885 M479_3886 M479_3886 M479_3886 4287876 4288529 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3886 M479_3887 M479_3887 M479_3887 4288510 4289256 + ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3887 M479_3888 M479_3888 M479_3888 4289288 4290211 + aminotransferase class-V family protein [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3888 M479_3889 M479_3889 M479_3889 4290262 4291041 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3889 M479_389 M479_389 M479_389 413686 414780 + coiled stalk of trimeric autotransporter adhesin family protein [UW] COG5295 Autotransporter adhesin gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=M479_389 M479_3890 M479_3890 M479_3890 4291041 4292063 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3890 M479_3891 M479_3891 M479_3891 4292220 4292591 + putative purine catabolism protein PucG [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3891 M479_3892 M479_3892 M479_3892 4292591 4293874 + amidase%2C hydantoinase/carbamoylase family protein hydantase: amidase%2C hydantoinase/carbamoylase family protein~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3892 M479_3893 M479_3893 M479_3893 4294347 4295117 - carbon-nitrogen hydrolase family protein [R] COG0388 Predicted amidohydrolase gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3893 M479_3894 M479_3894 M479_3894 4295105 4296265 - cys/Met metabolism PLP-dependent enzyme family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3894 M479_3895 M479_3895 mtnB mtnB 4296405 4297073 + methylthioribulose-1-phosphate dehydratase salvage_mtnB: methylthioribulose-1-phosphate dehydratase~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3895 M479_3896 M479_3896 mtnC mtnC 4297070 4297759 + 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase enolase-ppase: 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase~[C] COG4229 Predicted enolase-phosphatase gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3896 M479_3897 M479_3897 mtnD mtnD 4297832 4298374 + acireductone dioxygenase [S] COG1791 Uncharacterized conserved protein%2C contains double-stranded beta-helix domain gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3897 M479_3898 M479_3898 mtnA mtnA 4298417 4299457 - S-methyl-5-thioribose-1-phosphate isomerase salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase~[J] COG0182 Predicted translation initiation factor 2B subunit%2C eIF-2B alpha/beta/delta family gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3898 M479_3899 M479_3899 mtnK mtnK 4299653 4300876 + S-methyl-5-thioribose kinase MTRK: S-methyl-5-thioribose kinase~[R] COG4857 Predicted kinase gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3899 M479_39 M479_39 nadD nadD 44301 44963 - nicotinate (nicotinamide) nucleotide adenylyltransferase [H] COG1057 Nicotinic acid mononucleotide adenylyltransferase gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=M479_39 M479_390 M479_390 M479_390 414801 416648 + hypothetical protein yadA-like C-terminal region family protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=M479_390 M479_3900 M479_3900 M479_3900 4301782 4303572 + POTRA domain%2C ShlB-type family protein [U] COG2831 Hemolysin activation/secretion protein gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3900 M479_3901 M479_3901 M479_3901 4303613 4309345 + hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3901 M479_3902 M479_3902 M479_3902 4309500 4311353 + glycosyl transferase 41 family protein gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3902 M479_3903 M479_3903 M479_3903 4311355 4312101 + adhesin biosynthesis transcription regulatory family protein gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3903 M479_3904 M479_3904 M479_3904 4312383 4312841 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3904 M479_3905 M479_3905 M479_3905 4312984 4315431 - hypothetical protein acyl-CoA dehydrogenase%2C C-terminal domain protein~[I] COG1960 Acyl-CoA dehydrogenases gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3905 M479_3906 M479_3906 gmhA gmhA 4315671 4316252 + phosphoheptose isomerase gmhA: phosphoheptose isomerase~[G] COG0279 Phosphoheptose isomerase gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3906 M479_3907 M479_3907 M479_3907 4317193 4317933 - L%2CD-transpeptidase catalytic domain protein [S] COG3034 Uncharacterized protein conserved in bacteria gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3907 M479_3908 M479_3908 M479_3908 4316455 4317228 + glutamine amidotransferases class-II family protein [R] COG0121 Predicted glutamine amidotransferase gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3908 M479_3909 M479_3909 nqrA nqrA 4318429 4319772 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit~nqrA: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit~[C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrA gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3909 M479_391 M479_391 serC serC 417015 418100 + phosphoserine transaminase serC_1: phosphoserine transaminase~[HE] COG1932 Phosphoserine aminotransferase gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=M479_391 M479_3910 M479_3910 nqrB nqrB 4319776 4321017 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit~nqrB: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit~[C] COG1805 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrB gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3910 M479_3911 M479_3911 nqrC nqrC 4321007 4321807 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit~nqrC: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit~[C] COG2869 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrC gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3911 M479_3912 M479_3912 nqrD nqrD 4321800 4322429 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit~nqrD: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit~[C] COG1347 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrD gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3912 M479_3913 M479_3913 nqrE nqrE 4322436 4323032 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~nqrE: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~[C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrE gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3913 M479_3914 M479_3914 nqrF nqrF 4323048 4324271 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit~nqrF: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit~[C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrF gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3914 M479_3915 M479_3915 M479_3915 4324312 4325334 + apbE family protein [H] COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3915 M479_3916 M479_3916 M479_3916 4325347 4325574 + hypothetical protein conserved hypothetical protein~[S] COG2991 Uncharacterized protein conserved in bacteria gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3916 M479_3917 M479_3917 M479_3917 4325818 4326750 - glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3917 M479_3918 M479_3918 dinB dinB 4327121 4328179 + DNA polymerase IV [L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3918 M479_3919 M479_3919 pepD pepD 4328293 4329753 - Xaa-His dipeptidase family protein aa-his-dipept: Xaa-His dipeptidase family protein~[E] COG2195 Di- and tripeptidases gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3919 M479_392 M479_392 aroA aroA 418263 419549 + 3-phosphoshikimate 1-carboxyvinyltransferase aroA: 3-phosphoshikimate 1-carboxyvinyltransferase~[E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=M479_392 M479_3920 M479_3920 M479_3920 4331754 4332539 + lysR substrate binding domain protein [K] COG0583 Transcriptional regulator gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3920 M479_3921 M479_3921 M479_3921 4332999 4334603 - chitin binding domain protein [S] COG3397 Uncharacterized protein conserved in bacteria gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3921 M479_3922 M479_3922 M479_3922 4334800 4335105 - putative membrane protein gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3922 M479_3923 M479_3923 gpt gpt 4335532 4335990 + xanthine phosphoribosyltransferase [F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3923 M479_3924 M479_3924 M479_3924 4336117 4337364 + alpha/beta hydrolase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3924 M479_3925 M479_3925 crl crl 4337424 4337825 + sigma factor-binding protein crl gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3925 M479_3926 M479_3926 proB proB 4338002 4339105 + glutamate 5-kinase proB: glutamate 5-kinase~[E] COG0263 Glutamate 5-kinase gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3926 M479_3927 M479_3927 proA proA 4339115 4340374 + glutamate-5-semialdehyde dehydrogenase proA: glutamate-5-semialdehyde dehydrogenase~[E] COG0014 Gamma-glutamyl phosphate reductase gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3927 M479_3928 M479_3928 ycgR ycgR 4340711 4341460 + flagellar brake protein YcgR [M] COG5581 Predicted glycosyltransferase gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3928 M479_3929 M479_3929 M479_3929 4341658 4341912 + putative membrane protein gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3929 M479_393 M479_393 cmk cmk 419861 420553 + cytidylate kinase cmk: cytidylate kinase~[F] COG0283 Cytidylate kinase gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=M479_393 M479_3930 M479_3930 M479_3930 4342158 4342679 + ubiE/COQ5 methyltransferase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3930 M479_3931 M479_3931 M479_3931 4343409 4343966 + methyltransferase small domain protein [I] COG3963 Phospholipid N-methyltransferase gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3931 M479_3932 M479_3932 aroL aroL 4344213 4344737 + shikimate kinase 2 [E] COG0703 Shikimate kinase gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3932 M479_3933 M479_3933 M479_3933 4345227 4345514 + hypothetical protein conserved hypothetical protein~[S] COG3123 Uncharacterized protein conserved in bacteria gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3933 M479_3934 M479_3934 M479_3934 4345750 4346661 - exonuclease%2C RdgC family protein [L] COG2974 DNA recombination-dependent growth factor C gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3934 M479_3935 M479_3935 M479_3935 4346994 4347908 + glucokinase family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3935 M479_3936 M479_3936 M479_3936 4348369 4352058 - exonuclease SbcC family protein sbcc: exonuclease SbcC family protein~[L] COG0419 ATPase involved in DNA repair gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3936 M479_3937 M479_3937 sbcD sbcD 4352055 4353299 - exonuclease SbcCD%2C D subunit sbcd: exonuclease SbcCD%2C D subunit~[L] COG0420 DNA repair exonuclease gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3937 M479_3938 M479_3938 phoB phoB 4353567 4354256 + phosphate regulon transcriptional regulatory protein PhoB phoB: phosphate regulon transcriptional regulatory protein PhoB~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3938 M479_3939 M479_3939 phoR phoR 4354281 4355597 + phosphate regulon sensor kinase PhoR phoR_proteo: phosphate regulon sensor kinase PhoR~[T] COG0642 Signal transduction histidine kinase gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3939 M479_394 M479_394 rpsA rpsA 420727 422400 + ribosomal protein S1 rpsA: ribosomal protein S1~[J] COG0539 Ribosomal protein S1 gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=M479_394 M479_3940 M479_3940 pstS pstS 4355619 4356683 + phosphate ABC transporter%2C phosphate-binding protein PstS ptsS_2: phosphate binding family protein~[P] COG0226 ABC-type phosphate transport system%2C periplasmic component gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3940 M479_3941 M479_3941 brnQ brnQ 4357157 4358476 + branched-chain amino acid transport system II carrier protein livcs: branched-chain amino acid transport system II carrier protein~[E] COG1114 Branched-chain amino acid permeases gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3941 M479_3942 M479_3942 M479_3942 4358552 4359943 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3942 M479_3943 M479_3943 M479_3943 4360504 4362333 + hypothetical protein alpha amylase%2C N-terminal ig-like domain protein~[G] COG0366 Glycosidases gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3943 M479_3944 M479_3944 M479_3944 4362488 4363168 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3944 M479_3945 M479_3945 ggt ggt 4363376 4364677 - gamma-glutamyltransferase g_glut_trans: gamma-glutamyltransferase~[E] COG0405 Gamma-glutamyltransferase gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3945 M479_3946 M479_3946 M479_3946 4364692 4365138 - gamma-glutamyltranspeptidase family protein [E] COG0405 Gamma-glutamyltransferase gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3946 M479_3947 M479_3947 M479_3947 4365527 4366129 - hypothetical protein C-terminal domain of 1-Cys peroxiredoxin family protein~[O] COG0450 Peroxiredoxin gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3947 M479_3948 M479_3948 M479_3948 4366408 4366989 - hypothetical protein conserved hypothetical protein~[S] COG3124 Uncharacterized protein conserved in bacteria gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3948 M479_3949 M479_3949 queA queA 4367192 4368262 + tRNA ribosyltransferase-isomerase S-adenosylmethionine:tRNA ribosyltransferase-isomerase~queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase~[J] COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3949 M479_395 M479_395 M479_395 422729 423031 - hypothetical protein conserved hypothetical protein gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=M479_395 M479_3950 M479_3950 tgt tgt 4368355 4369479 + tRNA-guanine transglycosylase Q_tRNA_tgt: tRNA-guanine transglycosylase~[J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3950 M479_3951 M479_3951 yajC yajC 4369591 4369926 + preprotein translocase%2C YajC subunit yajC: preprotein translocase%2C YajC subunit~[U] COG1862 Preprotein translocase subunit YajC gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3951 M479_3952 M479_3952 secD secD 4369987 4371801 + export membrane protein SecD secD: -export membrane protein SecD~[U] COG0342 Preprotein translocase subunit SecD gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3952 M479_3953 M479_3953 secF secF 4371812 4372780 + export membrane protein secF -export membrane protein secF~[U] COG0341 Preprotein translocase subunit SecF gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3953 M479_3954 M479_3954 M479_3954 4372987 4373445 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3954 M479_3955 M479_3955 M479_3955 4373743 4374438 + hypothetical protein conserved hypothetical protein gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3955 M479_3956 M479_3956 M479_3956 4374471 4375064 + putative membrane protein gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3956 M479_3957 M479_3957 nrdR nrdR 4375135 4375584 + transcriptional regulator NrdR [K] COG1327 Predicted transcriptional regulator%2C consists of a Zn-ribbon and ATP-cone domains gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3957 M479_3958 M479_3958 ribD ribD 4375734 4376843 + riboflavin biosynthesis protein RibD eubact_ribD: riboflavin biosynthesis protein RibD~[H] COG1985 Pyrimidine reductase%2C riboflavin biosynthesis gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3958 M479_3959 M479_3959 ribH ribH 4376979 4377449 + 6%2C7-dimethyl-8-ribityllumazine synthase lumazine-synth: 6%2C7-dimethyl-8-ribityllumazine synthase~[H] COG0054 Riboflavin synthase beta-chain gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3959 M479_396 M479_396 ihfB ihfB 422461 422745 + integration host factor%2C beta subunit hip: integration host factor%2C beta subunit~[L] COG0776 Bacterial nucleoid DNA-binding protein gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=M479_396 M479_3960 M479_3960 nusB nusB 4377470 4377886 + transcription antitermination factor NusB nusB: transcription antitermination factor NusB~[K] COG0781 Transcription termination factor gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3960 M479_3961 M479_3961 thiL thiL 4378127 4379116 + thiamine-phosphate kinase thiL: thiamine-phosphate kinase~[H] COG0611 Thiamine monophosphate kinase gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3961 M479_3962 M479_3962 pgpA pgpA 4379109 4379594 + phosphatidylglycerophosphatase A [I] COG1267 Phosphatidylglycerophosphatase A and related proteins gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3962 M479_3963 M479_3963 M479_3963 4379807 4380265 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3963 M479_3964 M479_3964 dxs dxs 4380444 4382303 - 1-deoxy-D-xylulose-5-phosphate synthase dxs: 1-deoxy-D-xylulose-5-phosphate synthase~[HI] COG1154 Deoxyxylulose-5-phosphate synthase gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3964 M479_3965 M479_3965 M479_3965 4382459 4383379 - polyprenyl synthetase family protein [H] COG0142 Geranylgeranyl pyrophosphate synthase gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3965 M479_3966 M479_3966 xseB xseB 4383384 4383638 - exodeoxyribonuclease VII%2C small subunit xseB: exodeoxyribonuclease VII%2C small subunit~[L] COG1722 Exonuclease VII small subunit gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3966 M479_3967 M479_3967 thiI thiI 4383988 4385439 + tRNA sulfurtransferase ThiI [H] COG0301 Thiamine biosynthesis ATP pyrophosphatase gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3967 M479_3968 M479_3968 yajL yajL 4385507 4386097 - chaperone protein YajL [R] COG0693 Putative intracellular protease/amidase gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3968 M479_3969 M479_3969 M479_3969 4386060 4386971 - 2-dehydropantoate 2-reductase family protein apbA_panE: 2-dehydropantoate 2-reductase family protein~[H] COG1893 Ketopantoate reductase gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3969 M479_397 M479_397 M479_397 423292 425583 + DNA internalization-related competence protein ComEC/Rec2 comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2~[R] COG0658 Predicted membrane metal-binding protein gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=M479_397 M479_3970 M479_3970 M479_3970 4387203 4387694 + hypothetical protein conserved hypothetical protein~[S] COG1666 Uncharacterized protein conserved in bacteria gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3970 M479_3971 M479_3971 M479_3971 4387818 4389182 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3971 M479_3972 M479_3972 cyoE cyoE 4389666 4390553 - protoheme IX farnesyltransferase cyoE_ctaB: protoheme IX farnesyltransferase~[O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3972 M479_3973 M479_3973 cyoD cyoD 4390567 4390899 - cytochrome o ubiquinol oxidase subunit IV cyoD: cytochrome o ubiquinol oxidase subunit IV~[C] COG3125 Heme/copper-type cytochrome/quinol oxidase%2C subunit 4 gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3973 M479_3974 M479_3974 cyoC cyoC 4390899 4391513 - cytochrome o ubiquinol oxidase%2C subunit III cyoC: cytochrome o ubiquinol oxidase%2C subunit III~[C] COG1845 Heme/copper-type cytochrome/quinol oxidase%2C subunit 3 gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3974 M479_3975 M479_3975 cyoB cyoB 4391503 4393494 - cytochrome o ubiquinol oxidase%2C subunit I cyoB: cytochrome o ubiquinol oxidase%2C subunit I~[C] COG0843 Heme/copper-type cytochrome/quinol oxidases%2C subunit 1 gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3975 M479_3976 M479_3976 cyoA cyoA 4393499 4394455 - ubiquinol oxidase%2C subunit II cyoA: ubiquinol oxidase%2C subunit II~[C] COG1622 Heme/copper-type cytochrome/quinol oxidases%2C subunit 2 gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3976 M479_3977 M479_3977 M479_3977 4394825 4395592 - nucleoside-specific channel-forming%2C Tsx family protein gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3977 M479_3978 M479_3978 M479_3978 4395884 4397362 - AmpG-like permease family protein 2A0125: AmpG-like permease family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3978 M479_3979 M479_3979 M479_3979 4397480 4398058 - hypothetical protein conserved hypothetical protein~[M] COG3056 Uncharacterized lipoprotein gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3979 M479_398 M479_398 msbA msbA 425619 427367 + lipid A export permease/ATP-binding protein MsbA msbA_lipidA: lipid A export permease/ATP-binding protein MsbA~[V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=M479_398 M479_3980 M479_3980 bolA bolA 4398413 4398727 + protein BolA [T] COG0271 Stress-induced morphogen (activity unknown) gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3980 M479_3981 M479_3981 M479_3981 4398886 4399071 + hypothetical protein conserved hypothetical protein gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3981 M479_3982 M479_3982 tig tig 4399144 4400448 + trigger factor tig: trigger factor~[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3982 M479_3983 M479_3983 clpP clpP 4400910 4401533 + ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP clpP: ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP~[OU] COG0740 Protease subunit of ATP-dependent Clp proteases gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3983 M479_3984 M479_3984 clpX clpX 4401739 4403010 + ATP-dependent Clp protease%2C ATP-binding subunit ClpX clpX: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~[O] COG1219 ATP-dependent protease Clp%2C ATPase subunit gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3984 M479_3985 M479_3985 lon lon 4403205 4405559 + endopeptidase La lon: endopeptidase La~[O] COG0466 ATP-dependent Lon protease%2C bacterial type gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3985 M479_3986 M479_3986 hupB hupB 4405777 4406049 + DNA-binding protein HU-beta [L] COG0776 Bacterial nucleoid DNA-binding protein gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3986 M479_3987 M479_3987 M479_3987 4406145 4406315 + hypothetical protein conserved hypothetical protein gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3987 M479_3988 M479_3988 M479_3988 4406305 4406763 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3988 M479_3989 M479_3989 M479_3989 4407061 4408947 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3989 M479_399 M479_399 lpxK lpxK 427364 428350 + tetraacyldisaccharide 4'-kinase lpxK: tetraacyldisaccharide 4'-kinase~[M] COG1663 Tetraacyldisaccharide-1-P 4'-kinase gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=M479_399 M479_3990 M479_3990 M479_3990 4409087 4409533 + competence ComEA helix-hairpin-helix repeat region domain protein [L] COG1555 DNA uptake protein and related DNA-binding proteins gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3990 M479_3991 M479_3991 tesC tesC 4409887 4410294 + long-chain acyl-CoA thioesterase tesC [R] COG0824 Predicted thioesterase gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3991 M479_3992 M479_3992 queC queC 4410380 4411078 - queuosine biosynthesis protein QueC [R] COG0603 Predicted PP-loop superfamily ATPase gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3992 M479_3993 M479_3993 M479_3993 4411367 4413070 - bacterial extracellular solute-binding s%2C 5 Middle family protein [R] COG4533 ABC-type uncharacterized transport system%2C periplasmic component gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3993 M479_3994 M479_3994 cof cof 4413175 4413996 + HMP-PP phosphatase [R] COG0561 Predicted hydrolases of the HAD superfamily gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3994 M479_3995 M479_3995 M479_3995 4414208 4415248 - pyridoxal-phosphate dependent enzyme family protein [E] COG0031 Cysteine synthase gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3995 M479_3996 M479_3996 M479_3996 4415374 4415835 + asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3996 M479_3997 M479_3997 M479_3997 4415937 4417703 + ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3997 M479_3998 M479_3998 mdlB mdlB 4417696 4419519 + multidrug resistance-like ATP-binding protein MdlB [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3998 M479_3999 M479_3999 glnK glnK 4419933 4420271 + nitrogen regulatory protein P-II 2 [E] COG0347 Nitrogen regulatory protein PII gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=M479_3999 M479_4 M479_4 M479_4 9708 9872 + hypothetical protein conserved hypothetical protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4 M479_40 M479_40 holA holA 44953 45987 - DNA polymerase III%2C delta subunit holA: DNA polymerase III%2C delta subunit~[L] COG1466 DNA polymerase III%2C delta subunit gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=M479_40 M479_400 M479_400 M479_400 428358 429767 - hypothetical protein conserved hypothetical protein~[S] COG5383 Uncharacterized protein conserved in bacteria gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=M479_400 M479_4000 M479_4000 amt amt 4420311 4421600 + ammonium transporter family protein amt: ammonium transporter family protein~[P] COG0004 Ammonia permease gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4000 M479_4001 M479_4001 tesB tesB 4421860 4422720 - acyl-CoA thioesterase II tesB: acyl-CoA thioesterase II~[I] COG1946 Acyl-CoA thioesterase gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4001 M479_4002 M479_4002 M479_4002 4422977 4423498 + type III secretion system lipochaperone family protein [S] COG3126 Uncharacterized protein conserved in bacteria gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4002 M479_4003 M479_4003 M479_4003 4423634 4424023 - methylated-DNA--[]-cysteine S-methyltransferase family protein ogt: methylated-DNA--[]-cysteine S-methyltransferase family protein~[L] COG3695 Predicted methylated DNA-protein cysteine methyltransferase gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4003 M479_4004 M479_4004 hha hha 4424911 4425114 - hemolysin expression-modulating protein gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4004 M479_4005 M479_4005 M479_4005 4425163 4425531 - biofilm formation regulator YbaJ family protein gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4005 M479_4006 M479_4006 M479_4006 4425690 4426043 - hypothetical protein conserved hypothetical protein gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4006 M479_4007 M479_4007 rpmJ rpmJ 4426917 4427060 - ribosomal protein L36 rpmJ_bact: ribosomal protein L36~[J] COG0257 Ribosomal protein L36 gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4007 M479_4008 M479_4008 rpmE rpmE 4427076 4427336 - ribosomal protein L31 L31: ribosomal protein L31~[J] COG0254 Ribosomal protein L31 gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4008 M479_4009 M479_4009 M479_4009 4427522 4430674 - RND transporter%2C hydrophobe/amphiphile efflux-1 family protein 2A0602: RND transporter%2C hydrophobe/amphiphile efflux-1 family protein~[V] COG0841 Cation/multidrug efflux pump gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4009 M479_401 M479_401 M479_401 430486 430695 + 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=M479_401 M479_4010 M479_4010 M479_4010 4430691 4431878 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4010 M479_4011 M479_4011 M479_4011 4432023 4432679 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4011 M479_4012 M479_4012 ychN ychN 4432692 4433045 + protein ychN [P] COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4012 M479_4013 M479_4013 M479_4013 4433439 4436711 + mechanosensitive ion channel family protein [M] COG3264 Small-conductance mechanosensitive channel gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4013 M479_4014 M479_4014 M479_4014 4437377 4437913 - primosomal replication priB and priC family protein [L] COG3923 Primosomal replication protein N'' gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4014 M479_4015 M479_4015 M479_4015 4438114 4438494 + hypothetical protein conserved hypothetical protein~[S] COG2832 Uncharacterized protein conserved in bacteria gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4015 M479_4016 M479_4016 apt apt 4438733 4439296 + adenine phosphoribosyltransferase apt: adenine phosphoribosyltransferase~[F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4016 M479_4017 M479_4017 dnaX dnaX 4439952 4441928 + DNA polymerase III%2C subunit gamma and tau dnaX_nterm: DNA polymerase III%2C subunit gamma and tau~[L] COG2812 DNA polymerase III%2C gamma/tau subunits gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4017 M479_4018 M479_4018 M479_4018 4441984 4442316 + DNA-binding protein%2C YbaB/EbfC family DNA_YbaB_EbfC: DNA-binding protein%2C YbaB/EbfC family~[S] COG0718 Uncharacterized protein conserved in bacteria gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4018 M479_4019 M479_4019 recR recR 4442346 4442921 + recombination protein RecR recR: recombination protein RecR~[L] COG0353 Recombinational DNA repair protein (RecF pathway) gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4019 M479_402 M479_402 M479_402 431243 431425 + trm112p-like family protein [S] COG2835 Uncharacterized conserved protein gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=M479_402 M479_4020 M479_4020 M479_4020 4443119 4444987 + hsp90 family protein [O] COG0326 Molecular chaperone%2C HSP90 family gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4020 M479_4021 M479_4021 M479_4021 4445214 4445858 + adenylate kinase family protein adk: adenylate kinase family protein~[F] COG0563 Adenylate kinase and related kinases gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4021 M479_4022 M479_4022 hemH hemH 4445951 4446910 + ferrochelatase hemH: ferrochelatase~[H] COG0276 Protoheme ferro-lyase (ferrochelatase) gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4022 M479_4023 M479_4023 ascD ascD 4447508 4448497 + CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4023 M479_4024 M479_4024 rfbF rfbF 4448535 4449308 + glucose-1-phosphate cytidylyltransferase G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase~[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B%2C gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4024 M479_4025 M479_4025 rfbG rfbG 4449488 4450387 + CDP-glucose 4%2C6-dehydratase CDP_4_6_dhtase: CDP-glucose 4%2C6-dehydratase~[MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4025 M479_4026 M479_4026 ddhC ddhC 4450405 4451718 + CDP-4-keto-6-deoxy-D-glucose-3-dehydrase [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4026 M479_4027 M479_4027 M479_4027 4451755 4452612 + rmlD substrate binding domain protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4027 M479_4028 M479_4028 M479_4028 4452613 4453896 + NAD(P)-binding Rossmann-like domain protein [H] COG1232 Protoporphyrinogen oxidase gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4028 M479_4029 M479_4029 M479_4029 4453970 4455313 + putative membrane protein gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4029 M479_403 M479_403 kdsB kdsB 431422 432174 + 3-deoxy-D-manno-octulosonate cytidylyltransferase kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase~[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=M479_403 M479_4030 M479_4030 M479_4030 4455324 4456037 + glycosyl transferase 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4030 M479_4031 M479_4031 wbyI wbyI 4456003 4456245 + glycosyltransferase-like domain protein gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4031 M479_4032 M479_4032 M479_4032 4456417 4457559 + glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4032 M479_4033 M479_4033 M479_4033 4457556 4458776 + putative membrane protein gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4033 M479_4034 M479_4034 M479_4034 4459025 4460038 + glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4034 M479_4035 M479_4035 M479_4035 4460054 4460572 + rmlD substrate binding domain protein [M] COG1089 GDP-D-mannose dehydratase gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4035 M479_4036 M479_4036 M479_4036 4460583 4461176 + NAD dependent epimerase/dehydratase family protein [M] COG1089 GDP-D-mannose dehydratase gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4036 M479_4037 M479_4037 fcl fcl 4461182 4462147 + GDP-L-fucose synthase [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4037 M479_4038 M479_4038 M479_4038 4462327 4463733 + mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~[M] COG0836 Mannose-1-phosphate guanylyltransferase gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4038 M479_4039 M479_4039 M479_4039 4463736 4464479 + glycosyltransferase like 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4039 M479_404 M479_404 M479_404 432537 433430 + fructosamine kinase family protein gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=M479_404 M479_4040 M479_4040 M479_4040 4464484 4465857 + phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III family protein [G] COG1109 Phosphomannomutase gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4040 M479_4041 M479_4041 M479_4041 4465905 4467056 + chain length determinant family protein [M] COG3765 Chain length determinant protein gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4041 M479_4042 M479_4042 M479_4042 4467260 4468564 + pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4042 M479_4043 M479_4043 M479_4043 4468661 4470352 - transporter%2C monovalent cation:proton antiporter-2 family protein 2a37: transporter%2C monovalent cation:proton antiporter-2 family protein~[P] COG4651 Kef-type K+ transport system%2C predicted NAD-binding component gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4043 M479_4044 M479_4044 M479_4044 4470587 4471270 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4044 M479_4045 M479_4045 M479_4045 4471216 4471800 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4045 M479_4046 M479_4046 M479_4046 4472082 4472339 + putative protein UshA: UDP-sugar hydrolase [F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4046 M479_4047 M479_4047 M479_4047 4472329 4473141 + calcineurin-like phosphoesterase family protein [F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4047 M479_4048 M479_4048 M479_4048 4473135 4473758 + hypothetical protein 5'-nucleotidase%2C C-terminal domain protein~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4048 M479_4049 M479_4049 M479_4049 4473862 4474101 - hypothetical protein conserved hypothetical protein gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4049 M479_405 M479_405 M479_405 434221 435006 + methyltransferase small domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=M479_405 M479_4050 M479_4050 M479_4050 4474115 4474372 - hypothetical protein conserved hypothetical protein gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4050 M479_4051 M479_4051 ybaK ybaK 4474438 4474917 - cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK [S] COG2606 Uncharacterized conserved protein gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4051 M479_4052 M479_4052 M479_4052 4475181 4475990 - traB family protein [S] COG3735 Uncharacterized protein conserved in bacteria gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4052 M479_4053 M479_4053 M479_4053 4476511 4479396 - copper-translocating P-type ATPase ATPase-IB1_Cu: copper-translocating P-type ATPase~[P] COG2217 Cation transport ATPase gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4053 M479_4054 M479_4054 cueR cueR 4479603 4480022 + Cu(I)-responsive transcriptional regulator cueR: Cu(I)-responsive transcriptional regulator~[K] COG0789 Predicted transcriptional regulators gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4054 M479_4055 M479_4055 ybbJ ybbJ 4480131 4480580 - inner membrane protein ybbJ [OU] COG1585 Membrane protein implicated in regulation of membrane protease activity gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4055 M479_4056 M479_4056 M479_4056 4480583 4481497 - SPFH domain / Band 7 family protein [O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4056 M479_4057 M479_4057 M479_4057 4481692 4482561 - thioredoxin family protein [O] COG3118 Thioredoxin domain-containing protein gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4057 M479_4058 M479_4058 M479_4058 4482638 4483414 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4058 M479_4059 M479_4059 M479_4059 4483801 4484373 - GDSL-like Lipase/Acylhydrolase family protein [E] COG2755 Lysophospholipase L1 and related esterases gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4059 M479_406 M479_406 M479_406 435003 436325 + kicB killing factor family protein [D] COG3006 Uncharacterized protein involved in chromosome partitioning gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=M479_406 M479_4060 M479_4060 M479_4060 4484407 4485093 + ABC transporter family protein [Q] COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis%2C ATPase component gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4060 M479_4061 M479_4061 M479_4061 4485090 4487519 + ftsX-like permease family protein [Q] COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis%2C permease component gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4061 M479_4062 M479_4062 purK purK 4487563 4488627 - phosphoribosylaminoimidazole carboxylase%2C ATPase subunit purK: phosphoribosylaminoimidazole carboxylase%2C ATPase subunit~[F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4062 M479_4063 M479_4063 purE purE 4488624 4489148 - phosphoribosylaminoimidazole carboxylase catalytic subunit PurE [F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4063 M479_4064 M479_4064 lpxH lpxH 4489444 4490166 - UDP-2%2C3-diacylglucosamine diphosphatase lipid_A_lpxH: UDP-2%2C3-diacylglucosamine diphosphatase~[S] COG2908 Uncharacterized protein conserved in bacteria gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4064 M479_4065 M479_4065 ppiB ppiB 4490177 4490671 - peptidyl-prolyl cis-trans isomerase B [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4065 M479_4066 M479_4066 cysS cysS 4490882 4492267 + cysteine--tRNA ligase cysS: cysteine--tRNA ligase~[J] COG0215 Cysteinyl-tRNA synthetase gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4066 M479_4067 M479_4067 M479_4067 4492394 4492624 + hypothetical protein conserved hypothetical protein gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4067 M479_4068 M479_4068 M479_4068 4492614 4493072 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4068 M479_4069 M479_4069 M479_4069 4493219 4493431 - hypothetical protein conserved hypothetical protein~[S] COG2501 Uncharacterized conserved protein gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4069 M479_407 M479_407 mukE mukE 436306 437034 + chromosome partition protein mukE [D] COG3095 Uncharacterized protein involved in chromosome partitioning gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=M479_407 M479_4070 M479_4070 folD folD 4493446 4494312 - bifunctional protein FolD protein bifunctional protein FolD~[H] COG0190 5%2C10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4070 M479_4071 M479_4071 M479_4071 4494528 4494604 + tRNA-Arg tRNA gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4071 M479_4072 M479_4072 M479_4072 4495423 4496070 - hypothetical protein conserved hypothetical protein gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4072 M479_4073 M479_4073 M479_4073 4496055 4496393 - hypothetical protein conserved hypothetical protein gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4073 M479_4074 M479_4074 M479_4074 4496927 4497172 + hypothetical protein conserved hypothetical protein gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4074 M479_4075 M479_4075 M479_4075 4497169 4497345 + rhs element Vgr domain protein gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4075 M479_4076 M479_4076 ynbA ynbA 4497572 4498174 + inner membrane protein ynbA [I] COG0558 Phosphatidylglycerophosphate synthase gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4076 M479_4077 M479_4077 M479_4077 4498167 4499096 + cytidylyltransferase family protein [R] COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4077 M479_4078 M479_4078 M479_4078 4499106 4499738 + acyltransferase family protein [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4078 M479_4079 M479_4079 M479_4079 4499735 4501498 + alpha/beta hydrolase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4079 M479_408 M479_408 M479_408 437031 441488 + hypothetical protein mukB N-terminal family protein~[D] COG3096 Uncharacterized protein involved in chromosome partitioning gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=M479_408 M479_4080 M479_4080 M479_4080 4501491 4502810 + hypothetical protein conserved hypothetical protein~[I] COG0671 Membrane-associated phospholipid phosphatase gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4080 M479_4081 M479_4081 M479_4081 4502792 4503193 + putative Zn-dependent hydrolases of the beta-lactamase fold protein putative predicted Zn-dependent hydrolases of the beta-lactamase fold gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4081 M479_4082 M479_4082 M479_4082 4503290 4503595 + hypothetical protein conserved hypothetical protein gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4082 M479_4083 M479_4083 M479_4083 4503962 4504147 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4083 M479_4084 M479_4084 M479_4084 4504222 4504434 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4084 M479_4085 M479_4085 M479_4085 4504525 4504737 - putative transposition helper domain protein [L] COG1484 DNA replication protein gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4085 M479_4086 M479_4086 M479_4086 4504737 4505051 - putative transposase Orf A%2C insertion element IS100 [L] COG4584 Transposase and inactivated derivatives gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4086 M479_4087 M479_4087 M479_4087 4505015 4505758 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4087 M479_4088 M479_4088 M479_4088 4505852 4506745 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4088 M479_4089 M479_4089 M479_4089 4506800 4507789 - aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4089 M479_409 M479_409 M479_409 441704 442162 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=M479_409 M479_4090 M479_4090 M479_4090 4507815 4508666 - aldo/keto reductase family protein [R] COG0656 Aldo/keto reductases%2C related to diketogulonate reductase gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4090 M479_4091 M479_4091 M479_4091 4509118 4510746 + hypothetical protein conserved hypothetical protein gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4091 M479_4092 M479_4092 bglB bglB 4510825 4513206 - thermostable beta-glucosidase B [G] COG1472 Beta-glucosidase-related glycosidases gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4092 M479_4093 M479_4093 M479_4093 4513365 4513895 - GDYXXLXY family protein [S] COG4929 Uncharacterized membrane-anchored protein gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4093 M479_4094 M479_4094 M479_4094 4513888 4516095 - hypothetical protein conserved hypothetical protein~[S] COG4984 Predicted membrane protein gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4094 M479_4095 M479_4095 M479_4095 4516508 4517716 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4095 M479_4096 M479_4096 M479_4096 4517795 4518103 + putative cytoplasmic protein [S] COG2850 Uncharacterized conserved protein gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4096 M479_4097 M479_4097 M479_4097 4518205 4518699 - hypothetical protein conserved hypothetical protein gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4097 M479_4098 M479_4098 M479_4098 4519234 4521150 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4098 M479_4099 M479_4099 M479_4099 4521959 4522198 + hypothetical protein conserved hypothetical protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4099 M479_41 M479_41 M479_41 45984 46607 - lipopolysaccharide-assembly family protein [M] COG2980 Rare lipoprotein B gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=M479_41 M479_410 M479_410 M479_410 442593 444302 + L%2CD-transpeptidase catalytic domain protein [S] COG2989 Uncharacterized protein conserved in bacteria gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=M479_410 M479_4100 M479_4100 M479_4100 4522237 4522488 + hypothetical protein conserved hypothetical protein gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4100 M479_4101 M479_4101 M479_4101 4522512 4523084 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4101 M479_4102 M479_4102 M479_4102 4523096 4523350 - hypothetical protein conserved hypothetical protein gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4102 M479_4103 M479_4103 M479_4103 4523736 4524137 - hypothetical protein conserved hypothetical protein gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4103 M479_4104 M479_4104 M479_4104 4524405 4524848 - putative membrane protein gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4104 M479_4105 M479_4105 M479_4105 32 493 + hypothetical protein conserved hypothetical protein gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4105 M479_4106 M479_4106 M479_4106 574 3462 + phage tail fiber repeat family protein gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4106 M479_4107 M479_4107 M479_4107 3764 4372 + caudovirales tail fiber assembly family protein gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4107 M479_4108 M479_4108 M479_4108 4506 5285 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4108 M479_4109 M479_4109 M479_4109 5285 6307 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4109 M479_411 M479_411 M479_411 444526 445074 + hypothetical protein conserved hypothetical protein~[S] COG3108 Uncharacterized protein conserved in bacteria gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=M479_411 M479_4110 M479_4110 M479_4110 6431 8440 - parB-like nuclease domain protein [K] COG1475 Predicted transcriptional regulators gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4110 M479_4111 M479_4111 M479_4111 8513 8743 - hypothetical protein conserved hypothetical protein gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4111 M479_4112 M479_4112 M479_4112 9456 9962 - antirestriction family protein [R] COG4734 Antirestriction protein gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4112 M479_4113 M479_4113 M479_4113 10361 11140 - putative ychA gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4113 M479_4114 M479_4114 M479_4114 11194 11613 - hypothetical protein conserved hypothetical protein gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4114 M479_4115 M479_4115 M479_4115 11624 11845 - hypothetical protein conserved hypothetical protein gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4115 M479_4116 M479_4116 M479_4116 11845 12522 - DNA methylase family protein [L] COG0863 DNA modification methylase gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4116 M479_4117 M479_4117 M479_4117 13023 13223 + hypothetical protein gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4117 M479_4118 M479_4118 M479_4118 13385 14776 - archaeal ATPase family protein [R] COG1672 Predicted ATPase (AAA+ superfamily) gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4118 M479_4119 M479_4119 M479_4119 15161 16132 - ParB/RepB/Spo0J family partition domain protein parB_part: ParB/RepB/Spo0J family partition domain protein~[K] COG1475 Predicted transcriptional regulators gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4119 M479_412 M479_412 M479_412 445135 445782 + beta-lactamase superfamily domain protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=M479_412 M479_4120 M479_4120 parA parA 16129 17334 - plasmid partition protein A [D] COG1192 ATPases involved in chromosome partitioning gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4120 M479_4121 M479_4121 M479_4121 17636 17863 + antitoxin Phd YefM%2C type II toxin-antitoxin system family protein gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4121 M479_4122 M479_4122 M479_4122 17863 18189 + plasmid stabilization system family protein [R] COG3668 Plasmid stabilization system protein gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4122 M479_4123 M479_4123 M479_4123 18389 19009 + hypothetical protein resolvase%2C N terminal domain protein~[L] COG1961 Site-specific recombinases%2C DNA invertase Pin homologs gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4123 M479_4124 M479_4124 M479_4124 19075 20016 + hypothetical protein T_den_put_tspse: conserved hypothetical family protein~[S] COG5464 Uncharacterized conserved protein gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4124 M479_4125 M479_4125 M479_4125 20039 20314 - hypothetical protein gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4125 M479_4126 M479_4126 M479_4126 21053 21541 + PLD-like domain protein [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4126 M479_4127 M479_4127 M479_4127 21619 23382 + phospholipase D family protein gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4127 M479_4128 M479_4128 M479_4128 25458 26480 - transposase family protein [L] COG3547 Transposase and inactivated derivatives gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4128 M479_4129 M479_4129 M479_4129 26798 26914 - putative aTP/GTP-binding protein gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4129 M479_413 M479_413 aspC aspC 446206 447396 - aspartate aminotransferase [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=M479_413 M479_4130 M479_4130 repA repA 27687 28550 - incFII family plasmid replication initiator RepA incFII_RepA: incFII family plasmid replication initiator RepA gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4130 M479_4131 M479_4131 nuc nuc 28960 29514 - endonuclease [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4131 M479_4132 M479_4132 M479_4132 29662 30453 - DSBA-like thioredoxin domain protein [O] COG1651 Protein-disulfide isomerase gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4132 M479_4133 M479_4133 finO finO 30446 31165 - fertility inhibition protein gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4133 M479_4134 M479_4134 traX traX 31232 31969 - type-F conjugative transfer system pilin acetylase TraX traX_Ftype: type-F conjugative transfer system pilin acetylase TraX gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4134 M479_4135 M479_4135 traI traI 31971 37211 - conjugative transfer relaxase protein TraI traI_TIGR: conjugative transfer relaxase protein TraI~[L] COG0507 ATP-dependent exoDNAse (exonuclease V)%2C alpha subunit - helicase superfamily I member gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4135 M479_4136 M479_4136 traD traD 37211 39322 - type IV conjugative transfer system coupling protein TraD traD_Ftype: type IV conjugative transfer system coupling protein TraD~[U] COG3505 Type IV secretory pathway%2C VirD4 components gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4136 M479_4137 M479_4137 M479_4137 39404 40612 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4137 M479_4138 M479_4138 traA traA 40822 41172 + type IV conjugative transfer system pilin TraA traA_TIGR: type IV conjugative transfer system pilin TraA gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4138 M479_4139 M479_4139 traL traL 41323 41628 + type IV conjugative transfer system protein TraL traL_TIGR: type IV conjugative transfer system protein TraL gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4139 M479_414 M479_414 M479_414 447653 448732 - gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=M479_414 M479_4140 M479_4140 traE traE 41643 42209 + type IV conjugative transfer system protein TraE traE_TIGR: type IV conjugative transfer system protein TraE gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4140 M479_4141 M479_4141 traK traK 42235 42939 + type-F conjugative transfer system secretin TraK traK_Ftype: type-F conjugative transfer system secretin TraK gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4141 M479_4142 M479_4142 M479_4142 42926 44320 + bacterial conjugation TrbI-like family protein gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4142 M479_4143 M479_4143 traV traV 44342 44881 + type IV conjugative transfer system protein TraV traV: type IV conjugative transfer system protein TraV gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4143 M479_4144 M479_4144 M479_4144 45001 45225 + prokaryotic dksA/traR C4-type zinc finger family protein [T] COG1734 DnaK suppressor protein gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4144 M479_4145 M479_4145 M479_4145 45229 45414 + hypothetical protein conserved hypothetical protein gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4145 M479_4146 M479_4146 M479_4146 45398 45802 + hypothetical protein conserved hypothetical protein gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4146 M479_4147 M479_4147 M479_4147 45792 46358 + traP family protein gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4147 M479_4148 M479_4148 traC traC 46351 48981 + type-IV secretion system protein TraC traC-F-type: type-IV secretion system protein TraC~[U] COG3451 Type IV secretory pathway%2C VirB4 components gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4148 M479_4149 M479_4149 trbI trbI 48978 49325 + type-F conjugative transfer system protein TrbI trbI_Ftype: type-F conjugative transfer system protein TrbI gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4149 M479_415 M479_415 asnS asnS 449033 450433 - asparagine--tRNA ligase asnS: asparagine--tRNA ligase~[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=M479_415 M479_4150 M479_4150 traW traW 49325 49972 + type-F conjugative transfer system protein TraW traW: type-F conjugative transfer system protein TraW gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4150 M479_4151 M479_4151 M479_4151 49969 50961 + traU family protein gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4151 M479_4152 M479_4152 trbC trbC 50978 51607 + type-F conjugative transfer system pilin assembly protein TrbC trbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4152 M479_4153 M479_4153 traN traN 51628 53454 + type-F conjugative transfer system mating-pair stabilization protein TraN traN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4153 M479_4154 M479_4154 M479_4154 53486 53674 + putative membrane protein gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4154 M479_4155 M479_4155 traF traF 53705 54454 + type-F conjugative transfer system pilin assembly protein TraF traF: type-F conjugative transfer system pilin assembly protein TraF gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4155 M479_4156 M479_4156 traQ traQ 54471 54719 + type-F conjugative transfer system pilin chaperone TraQ traQ: type-F conjugative transfer system pilin chaperone TraQ gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4156 M479_4157 M479_4157 trbB trbB 54727 55254 + type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB trbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4157 M479_4158 M479_4158 M479_4158 55254 56624 + conjugative relaxosome accessory transposon family protein gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4158 M479_4159 M479_4159 M479_4159 56624 59443 + hypothetical protein traG-like%2C N-terminal region family protein gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4159 M479_416 M479_416 pncB pncB 450932 452137 - nicotinate phosphoribosyltransferase NAPRTase: nicotinate phosphoribosyltransferase~[H] COG1488 Nicotinic acid phosphoribosyltransferase gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=M479_416 M479_4160 M479_4160 M479_4160 59564 60772 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4160 M479_4161 M479_4161 M479_4161 60806 61528 - hypothetical protein conserved hypothetical protein gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4161 M479_4162 M479_4162 M479_4162 61781 62575 + hypothetical protein conserved hypothetical protein gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4162 M479_4163 M479_4163 M479_4163 62657 63133 + hypothetical protein conserved hypothetical protein gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4163 M479_4164 M479_4164 M479_4164 63168 64490 + ATP dependent DNA ligase domain protein gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4164 M479_4165 M479_4165 M479_4165 64490 64666 + hypothetical protein conserved hypothetical protein gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4165 M479_4166 M479_4166 M479_4166 64650 64865 + hypothetical protein conserved hypothetical protein gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4166 M479_4167 M479_4167 M479_4167 64862 65014 + hypothetical protein conserved hypothetical protein gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4167 M479_4168 M479_4168 M479_4168 65011 65316 + putative c-type natriuretic protein gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4168 M479_4169 M479_4169 M479_4169 65831 66592 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4169 M479_417 M479_417 pepN pepN 452853 455468 + aminopeptidase N pepN_proteo: aminopeptidase N~[E] COG0308 Aminopeptidase N gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=M479_417 M479_4170 M479_4170 caf1M caf1M 67064 67840 + chaperone protein caf1M [NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4170 M479_4171 M479_4171 caf1A caf1A 67865 70366 + F1 capsule-anchoring protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4171 M479_4172 M479_4172 caf1 caf1 70447 70959 + F1 capsule antigen gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4172 M479_4173 M479_4173 M479_4173 72815 73201 - hypothetical protein conserved hypothetical protein gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4173 M479_4174 M479_4174 M479_4174 71717 72820 + phage integrase family protein [L] COG0582 Integrase gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4174 M479_4175 M479_4175 M479_4175 73464 73676 + hypothetical protein conserved hypothetical protein gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4175 M479_4176 M479_4176 M479_4176 73786 76152 + cobalamin biosynthesis CobT family protein [H] COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5%2C 6-dimethylbenzimidazole phosphoribosyltransferase) gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4176 M479_4177 M479_4177 M479_4177 76249 77484 + AAA domain family protein [R] COG0714 MoxR-like ATPases gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4177 M479_4178 M479_4178 dnaE dnaE 77665 81189 + DNA polymerase III%2C alpha subunit polc: DNA polymerase III%2C alpha subunit~[L] COG0587 DNA polymerase III%2C alpha subunit gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4178 M479_4179 M479_4179 M479_4179 81186 81629 + hypothetical protein conserved hypothetical protein gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4179 M479_418 M479_418 pyrD pyrD 456104 457114 + dihydroorotate dehydrogenase pyrD_sub2: dihydroorotate dehydrogenase~[F] COG0167 Dihydroorotate dehydrogenase gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=M479_418 M479_4180 M479_4180 M479_4180 81659 82222 - putative dNA-binding protein gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4180 M479_4181 M479_4181 M479_4181 82295 82546 - hypothetical protein conserved hypothetical protein gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4181 M479_4182 M479_4182 M479_4182 82767 83198 + hypothetical protein conserved hypothetical protein gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4182 M479_4183 M479_4183 M479_4183 83318 84346 + hypothetical protein conserved hypothetical protein gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4183 M479_4184 M479_4184 M479_4184 84407 85351 + hypothetical protein 5'-3' exonuclease%2C C-terminal SAM fold family protein~[L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI) gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4184 M479_4185 M479_4185 M479_4185 85351 85617 + hypothetical protein gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4185 M479_4186 M479_4186 M479_4186 85620 86696 + recA bacterial DNA recombination family protein [L] COG0468 RecA/RadA recombinase gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4186 M479_4187 M479_4187 M479_4187 86787 86987 + putative membrane protein gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4187 M479_4188 M479_4188 M479_4188 86991 87821 + SPFH domain / Band 7 family protein [O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4188 M479_4189 M479_4189 M479_4189 87975 88346 + hypothetical protein conserved hypothetical protein gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4189 M479_419 M479_419 M479_419 457297 457848 + hypothetical protein conserved hypothetical protein gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=M479_419 M479_4190 M479_4190 M479_4190 88330 88740 + hypothetical protein conserved hypothetical protein gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4190 M479_4191 M479_4191 M479_4191 88808 89083 + hypothetical protein conserved hypothetical protein gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4191 M479_4192 M479_4192 M479_4192 89124 89303 + putative membrane protein gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4192 M479_4193 M479_4193 M479_4193 89300 89635 + putative periplasmic protein gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4193 M479_4194 M479_4194 M479_4194 89635 89847 + hypothetical protein conserved hypothetical protein gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4194 M479_4195 M479_4195 repB repB 90416 91480 - repFIB replication protein A gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4195 M479_4196 M479_4196 M479_4196 92440 92889 + hypothetical protein conserved hypothetical protein gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4196 M479_4197 M479_4197 M479_4197 93249 94271 - bacterial extracellular solute-binding s%2C 3 family protein [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems%2C periplasmic components gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4197 M479_4198 M479_4198 M479_4198 94687 95772 + calcineurin-like phosphoesterase family protein [L] COG0420 DNA repair exonuclease gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4198 M479_4199 M479_4199 M479_4199 95769 95993 + hypothetical protein conserved hypothetical protein gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4199 M479_42 M479_42 leuS leuS 46622 49204 - leucine--tRNA ligase leuS_bact: leucine--tRNA ligase~[J] COG0495 Leucyl-tRNA synthetase gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=M479_42 M479_420 M479_420 M479_420 457874 458983 - 2Fe-2S iron-sulfur cluster binding domain protein [R] COG3217 Uncharacterized Fe-S protein gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=M479_420 M479_4200 M479_4200 M479_4200 96002 97918 + ABC transporter family protein [L] COG0419 ATPase involved in DNA repair gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4200 M479_4201 M479_4201 M479_4201 97908 98654 + hypothetical protein conserved hypothetical protein gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4201 M479_4202 M479_4202 M479_4202 98667 99236 + hypothetical protein conserved hypothetical protein gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4202 M479_4203 M479_4203 M479_4203 99314 101629 + ribonucleoside-diphosphate reductase%2C alpha subunit nrdE_NrdA: ribonucleoside-diphosphate reductase%2C alpha subunit~[F] COG0209 Ribonucleotide reductase%2C alpha subunit gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4203 M479_4204 M479_4204 M479_4204 101737 102879 + ribonucleotide reductase%2C small chain family protein [F] COG0208 Ribonucleotide reductase%2C beta subunit gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4204 M479_4205 M479_4205 M479_4205 103036 103833 + phosphoribosyl-ATP pyrophosphohydrolase family protein gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4205 M479_4206 M479_4206 M479_4206 104072 104530 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4206 M479_4207 M479_4207 M479_4207 104730 105011 + hypothetical protein conserved hypothetical protein gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4207 M479_4208 M479_4208 M479_4208 105028 105204 + hypothetical protein conserved hypothetical protein gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4208 M479_4209 M479_4209 M479_4209 105217 105699 + hypothetical protein conserved hypothetical protein gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4209 M479_421 M479_421 M479_421 459086 461206 + THUMP domain protein [R] COG1092 Predicted SAM-dependent methyltransferases gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=M479_421 M479_4210 M479_4210 M479_4210 106375 106833 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4210 M479_4211 M479_4211 M479_4211 107059 107286 - hypothetical protein conserved hypothetical protein gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4211 M479_4212 M479_4212 M479_4212 107371 108021 - hypothetical protein conserved hypothetical protein gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4212 M479_4213 M479_4213 M479_4213 108345 108872 - repressor of phase-1 flagellin family protein gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4213 M479_4214 M479_4214 M479_4214 108877 109299 - putative lipoprotein gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4214 M479_4215 M479_4215 M479_4215 109359 109637 - hypothetical protein conserved hypothetical protein gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4215 M479_4216 M479_4216 M479_4216 109640 111199 - DEAD/DEAH box helicase family protein [KL] COG1061 DNA or RNA helicases of superfamily II gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4216 M479_4217 M479_4217 M479_4217 111294 111974 + parB-like nuclease domain protein [K] COG1475 Predicted transcriptional regulators gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4217 M479_4218 M479_4218 M479_4218 111974 112642 + parB-like nuclease domain protein [K] COG1475 Predicted transcriptional regulators gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4218 M479_4219 M479_4219 M479_4219 112639 113277 + ABC transporter family protein [R] COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4219 M479_422 M479_422 ccmA ccmA 461212 463125 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=M479_422 M479_4220 M479_4220 M479_4220 113270 113524 + hypothetical protein conserved hypothetical protein gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4220 M479_4221 M479_4221 M479_4221 113530 114420 + hypothetical protein conserved hypothetical protein~[R] COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4221 M479_4222 M479_4222 M479_4222 114430 114696 + hypothetical protein conserved hypothetical protein gene gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4222 M479_4223 M479_4223 M479_4223 114892 115533 + putative dNA-binding protein gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4223 M479_4224 M479_4224 M479_4224 115536 116792 + phage terminase large subunit gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4224 M479_4225 M479_4225 M479_4225 116826 118400 + hypothetical protein conserved hypothetical protein gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4225 M479_4226 M479_4226 M479_4226 118423 119319 + hypothetical protein conserved hypothetical protein gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4226 M479_4227 M479_4227 M479_4227 119346 120221 + hypothetical protein conserved hypothetical protein gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4227 M479_4228 M479_4228 M479_4228 120296 120958 + bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4228 M479_4229 M479_4229 M479_4229 121041 121436 + hypothetical protein conserved hypothetical protein gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4229 M479_423 M479_423 M479_423 463323 464540 + integral membrane%2C PqiA family protein pqiA_fam: integral membrane%2C PqiA family protein~[S] COG2995 Uncharacterized paraquat-inducible protein A gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=M479_423 M479_4230 M479_4230 M479_4230 121436 122269 + hypothetical protein conserved hypothetical protein gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4230 M479_4231 M479_4231 M479_4231 122367 122711 + hypothetical protein conserved hypothetical protein gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4231 M479_4232 M479_4232 M479_4232 122702 123175 + hypothetical protein conserved hypothetical protein gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4232 M479_4233 M479_4233 M479_4233 123177 123560 + hypothetical protein conserved hypothetical protein gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4233 M479_4234 M479_4234 M479_4234 123635 124381 + bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4234 M479_4235 M479_4235 M479_4235 124441 124758 + hypothetical protein conserved hypothetical protein gene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4235 M479_4236 M479_4236 M479_4236 124839 125108 + hypothetical protein conserved hypothetical protein gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4236 M479_4237 M479_4237 M479_4237 125116 129693 + tape measure domain protein tape_meas_nterm: tape measure domain protein~[S] COG5281 Phage-related minor tail protein gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4237 M479_4238 M479_4238 M479_4238 129735 130070 + phage minor tail family protein [S] COG4718 Phage-related protein gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4238 M479_4239 M479_4239 M479_4239 130160 130858 + phage minor tail protein L phage_tail_L: phage minor tail protein L~[S] COG4672 Phage-related protein gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4239 M479_424 M479_424 M479_424 464527 466179 + mce related family protein [R] COG3008 Paraquat-inducible protein B gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=M479_424 M479_4240 M479_4240 M479_4240 130851 131648 + hypothetical protein conserved hypothetical protein~[R] COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily gene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4240 M479_4241 M479_4241 M479_4241 131636 132223 + putative phage tail assembly protein [S] COG4723 Phage-related protein%2C tail component gene gene4324 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4241 M479_4242 M479_4242 M479_4242 132245 136876 + fibronectin type III domain protein [S] COG4733 Phage-related protein%2C tail component gene gene4325 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4242 M479_4243 M479_4243 M479_4243 116 1375 + type III secretion apparatus protein%2C YscD/HrpQ family type_III_yscD: type III secretion apparatus protein%2C YscD/HrpQ family gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4243 M479_4244 M479_4244 M479_4244 1372 1572 + hypothetical protein conserved hypothetical protein gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4244 M479_4245 M479_4245 eprI eprI 1573 1836 + type III secretion apparatus needle protein III_needle: type III secretion apparatus needle protein gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4245 M479_4246 M479_4246 M479_4246 1838 2185 + type III secretion protein%2C YscG family type_III_yscG: type III secretion protein%2C YscG family gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4246 M479_4247 M479_4247 M479_4247 2182 2679 + type III secretion effector%2C YopR family type_III_yopR: type III secretion effector%2C YopR family gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4247 M479_4248 M479_4248 M479_4248 2680 3027 + hypothetical protein yscI_hrpB_dom: type III secretion apparatus protein%2C YscI/HrpB%2C C-terminal domain gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4248 M479_4249 M479_4249 M479_4249 3073 3768 + type III secretion apparatus lipoprotein%2C YscJ/HrcJ family III_secr_YscJ: type III secretion apparatus lipoprotein%2C YscJ/HrcJ family~[U] COG4669 Type III secretory pathway%2C lipoprotein EscJ gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4249 M479_425 M479_425 M479_425 466176 466754 + hypothetical protein conserved hypothetical protein~[S] COG3009 Uncharacterized protein conserved in bacteria gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=M479_425 M479_4250 M479_4250 M479_4250 3771 4397 + YOP s translocation K family protein gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4250 M479_4251 M479_4251 M479_4251 4376 5008 + type III secretion apparatus protein%2C HrpE/YscL family hrpE_YscL_not: type III secretion apparatus protein%2C HrpE/YscL family~[NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4251 M479_4252 M479_4252 yscM2 yscM2 5233 5580 + regulatory protein YscM2 gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4252 M479_4253 M479_4253 M479_4253 6128 6394 + transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4253 M479_4254 M479_4254 M479_4254 6430 6852 + putative transposase insK for insertion sequence element IS150 [L] COG2801 Transposase and inactivated derivatives gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4254 M479_4255 M479_4255 M479_4255 7113 8135 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4255 M479_4256 M479_4256 M479_4256 8135 8914 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4256 M479_4257 M479_4257 M479_4257 8953 9117 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4257 M479_4258 M479_4258 M479_4258 9252 9386 + putative yPCD1.66 protein gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4258 M479_4259 M479_4259 yopH yopH 9629 11035 - tyrosine-protein phosphatase yopH gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4259 M479_426 M479_426 M479_426 467389 467847 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=M479_426 M479_4260 M479_4260 M479_4260 11656 12132 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4260 M479_4261 M479_4261 yopJ yopJ 12718 13584 - effector protein yopJ gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4261 M479_4262 M479_4262 ypkA ypkA 13980 16178 - protein kinase ypkA [RTKL] COG0515 Serine/threonine protein kinase gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4262 M479_4263 M479_4263 M479_4263 16196 16624 - tir chaperone family protein gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4263 M479_4264 M479_4264 M479_4264 16786 16896 + putative iSEhe3 transposase A [L] COG2963 Transposase and inactivated derivatives gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4264 M479_4265 M479_4265 M479_4265 16920 17114 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4265 M479_4266 M479_4266 M479_4266 17149 17376 - hypothetical protein conserved hypothetical protein gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4266 M479_4267 M479_4267 M479_4267 17370 17609 - hypothetical protein conserved hypothetical protein gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4267 M479_4268 M479_4268 M479_4268 17737 17955 + hypothetical protein gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4268 M479_4269 M479_4269 repA repA 18782 19648 - incFII family plasmid replication initiator RepA incFII_RepA: incFII family plasmid replication initiator RepA gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4269 M479_427 M479_427 M479_427 468003 468263 - hypothetical protein conserved hypothetical protein~[C] COG1145 Ferredoxin gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=M479_427 M479_4270 M479_4270 M479_4270 19957 20211 - replication regulatory RepB family protein gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4270 M479_4271 M479_4271 M479_4271 21014 21421 - HTH-like domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4271 M479_4272 M479_4272 M479_4272 20741 21142 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4272 M479_4273 M479_4273 M479_4273 21445 21762 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4273 M479_4274 M479_4274 M479_4274 21934 22170 - hypothetical protein conserved hypothetical protein~[L] COG0507 ATP-dependent exoDNAse (exonuclease V)%2C alpha subunit - helicase superfamily I member gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4274 M479_4275 M479_4275 M479_4275 22584 22730 + putative iSPsy24 transposase [L] COG2963 Transposase and inactivated derivatives gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4275 M479_4276 M479_4276 yadA yadA 23056 23991 - adhesin yadA [UW] COG5295 Autotransporter adhesin gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4276 M479_4277 M479_4277 M479_4277 23937 24065 - hypothetical protein gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4277 M479_4278 M479_4278 yadA yadA 24108 24359 - adhesin yadA gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4278 M479_4279 M479_4279 M479_4279 25342 27657 - tn3 transposase DDE domain protein [L] COG4644 Transposase and inactivated derivatives%2C TnpA family gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4279 M479_428 M479_428 M479_428 468425 469264 - SIS domain protein [K] COG1737 Transcriptional regulators gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=M479_428 M479_4280 M479_4280 M479_4280 24965 25345 + putative transposase [L] COG2801 Transposase and inactivated derivatives gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4280 M479_4281 M479_4281 tnpR tnpR 27821 28372 + transposon gamma-delta resolvase [L] COG1961 Site-specific recombinases%2C DNA invertase Pin homologs gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4281 M479_4282 M479_4282 M479_4282 28391 28855 + hypothetical protein conserved hypothetical protein gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4282 M479_4283 M479_4283 M479_4283 28994 29323 + hypothetical protein gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4283 M479_4284 M479_4284 M479_4284 29423 29689 + transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4284 M479_4285 M479_4285 M479_4285 29770 30522 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4285 M479_4286 M479_4286 M479_4286 30670 31095 - tir chaperone family protein gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4286 M479_4287 M479_4287 M479_4287 31439 31870 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4287 M479_4288 M479_4288 M479_4288 31870 33018 - integrase core domain protein [L] COG4584 Transposase and inactivated derivatives gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4288 M479_4289 M479_4289 M479_4289 33175 33789 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4289 M479_429 M479_429 murQ murQ 469472 470359 + N-acetylmuramic acid 6-phosphate etherase [R] COG2103 Predicted sugar phosphate isomerase gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=M479_429 M479_4290 M479_4290 yerA yerA 33852 34244 - yopE regulator gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4290 M479_4291 M479_4291 yopE yopE 34633 35097 + outer membrane virulence protein yopE gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4291 M479_4292 M479_4292 M479_4292 35237 35536 - plasmid stabilization system family protein [R] COG3668 Plasmid stabilization system protein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4292 M479_4293 M479_4293 M479_4293 35529 35771 - hypothetical protein conserved hypothetical protein~[K] COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4293 M479_4294 M479_4294 M479_4294 36619 36777 - hypothetical protein conserved hypothetical protein gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4294 M479_4295 M479_4295 sopB sopB 36945 37910 - protein sopB [K] COG1475 Predicted transcriptional regulators gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4295 M479_4296 M479_4296 M479_4296 37907 39073 - merR HTH regulatory family protein [D] COG1192 ATPases involved in chromosome partitioning gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4296 M479_4297 M479_4297 M479_4297 39873 40067 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4297 M479_4298 M479_4298 M479_4298 40179 40637 - HTH-like domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4298 M479_4299 M479_4299 M479_4299 40661 40978 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4299 M479_43 M479_43 M479_43 49465 49947 + hypothetical protein conserved hypothetical protein gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=M479_43 M479_430 M479_430 M479_430 470586 471281 + haloacid dehalogenase-like hydrolase family protein [E] COG0560 Phosphoserine phosphatase gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=M479_430 M479_4300 M479_4300 M479_4300 41085 41702 - enterobacterial TraT complement resistance family protein gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4300 M479_4301 M479_4301 M479_4301 42312 42860 - putative protein yopQ gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4301 M479_4302 M479_4302 yopT yopT 43548 44327 + cysteine protease yopT gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4302 M479_4303 M479_4303 sycT sycT 44327 44725 + chaperone protein sycT gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4303 M479_4304 M479_4304 M479_4304 44769 45080 - hypothetical protein conserved hypothetical protein gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4304 M479_4305 M479_4305 M479_4305 45430 45849 + hypothetical protein conserved hypothetical protein gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4305 M479_4306 M479_4306 M479_4306 46827 47042 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4306 M479_4307 M479_4307 yopM yopM 47085 48314 - outer membrane protein yopM [S] COG4886 Leucine-rich repeat (LRR) protein gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4307 M479_4308 M479_4308 M479_4308 48897 49052 + putative transposase gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4308 M479_4309 M479_4309 M479_4309 49615 50226 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4309 M479_431 M479_431 M479_431 471409 471954 + cytidine and deoxycytidylate deaminase zinc-binding region family protein [FJ] COG0590 Cytosine/adenosine deaminases gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=M479_431 M479_4310 M479_4310 M479_4310 50268 50822 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4310 M479_4311 M479_4311 yopD yopD 51365 52285 - protein yopD gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4311 M479_4312 M479_4312 yopB yopB 52304 53509 - protein yopB [S] COG5613 Uncharacterized conserved protein gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4312 M479_4313 M479_4313 M479_4313 53487 53993 - type III secretion low calcium response chaperone LcrH/SycD lcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD~[R] COG0457 FOG: TPR repeat gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4313 M479_4314 M479_4314 lcrV lcrV 54006 54986 - virulence-associated V antigen gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4314 M479_4315 M479_4315 M479_4315 54988 55275 - type III secretion protein LcrG lcrG_PcrG: type III secretion protein LcrG gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4315 M479_4316 M479_4316 M479_4316 55317 55757 - type III secretion system regulator LcrR lcrR: type III secretion system regulator LcrR gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4316 M479_4317 M479_4317 M479_4317 55754 57868 - type III secretion%2C HrcV family protein hrcV: type III secretion%2C HrcV family protein~[U] COG4789 Type III secretory pathway%2C component EscV gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4317 M479_4318 M479_4318 M479_4318 57855 58199 - tetratricopeptide repeat family protein gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4318 M479_4319 M479_4319 M479_4319 58196 58564 - type III secretion protein%2C YscX family type_III_YscX: type III secretion protein%2C YscX family gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4319 M479_432 M479_432 M479_432 472063 473523 - bacterial extracellular solute-binding s%2C 3 family protein [M] COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=M479_432 M479_4320 M479_4320 sycN sycN 58561 58932 - type III secretion chaperone SycN type_III_SycN: type III secretion chaperone SycN gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4320 M479_4321 M479_4321 M479_4321 58919 59197 - type III secretion effector delivery regulator%2C TyeA family type_III_tyeA: type III secretion effector delivery regulator%2C TyeA family gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4321 M479_4322 M479_4322 M479_4322 59178 60059 - type III secretion regulator YopN/LcrE/InvE/MxiC lcrE: type III secretion regulator YopN/LcrE/InvE/MxiC gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4322 M479_4323 M479_4323 M479_4323 60257 61576 + type III secretion apparatus H+-transporting two-sector ATPase III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4323 M479_4324 M479_4324 M479_4324 61573 62037 + type III secretion YscO family protein gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4324 M479_4325 M479_4325 M479_4325 62037 63404 + type III secretion system needle length determinant type_III_yscP: type III secretion system needle length determinant gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4325 M479_4326 M479_4326 epaO epaO 63401 64324 + type III secretion apparatus protein%2C YscQ/HrcQ family spaO_YscQ: type III secretion apparatus protein%2C YscQ/HrcQ family~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4326 M479_4327 M479_4327 epaP epaP 64321 64974 + type III secretion apparatus protein%2C YscR/HrcR family yscR: type III secretion apparatus protein%2C YscR/HrcR family~[U] COG4790 Type III secretory pathway%2C component EscR gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4327 M479_4328 M479_4328 M479_4328 64976 65242 + type III secretion%2C HrpO family protein fliQ_rel_III: type III secretion%2C HrpO family protein~[U] COG4794 Type III secretory pathway%2C component EscS gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4328 M479_4329 M479_4329 epaR epaR 65239 66024 + type III secretion apparatus protein SpaR/YscT/HrcT fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT~[U] COG4791 Type III secretory pathway%2C component EscT gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4329 M479_433 M479_433 purL purL 473839 477729 + phosphoribosylformylglycinamidine synthase FGAM_synt: phosphoribosylformylglycinamidine synthase~[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase%2C synthetase domain gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=M479_433 M479_4330 M479_4330 yscU yscU 66024 67088 + yop s translocation protein U [U] COG4792 Type III secretory pathway%2C component EscU gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4330 M479_4331 M479_4331 M479_4331 67663 68058 + type III secretion system chaperone YscW yscW: type III secretion system chaperone YscW gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4331 M479_4332 M479_4332 M479_4332 68182 68997 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4332 M479_4333 M479_4333 M479_4333 69400 69813 + type III secretion system chaperone%2C YscB family type_III_yscB: type III secretion system chaperone%2C YscB family gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=M479_4333 M479_434 M479_434 M479_434 478141 478590 - hypothetical protein conserved hypothetical protein gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=M479_434 M479_435 M479_435 M479_435 479042 479602 - putative exported protein gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=M479_435 M479_436 M479_436 M479_436 480603 480827 + hypothetical protein conserved hypothetical protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=M479_436 M479_437 M479_437 M479_437 480817 481275 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=M479_437 M479_438 M479_438 M479_438 481496 482932 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=M479_438 M479_439 M479_439 M479_439 482936 484048 + yfhG lipofamily protein gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=M479_439 M479_44 M479_44 M479_44 50081 50806 - ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=M479_44 M479_440 M479_440 M479_440 484011 485348 + AAA domain family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=M479_440 M479_441 M479_441 nadE nadE 485508 487130 + NAD+ synthetase nadE: NAD+ synthetase~[H] COG0171 NAD synthase gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=M479_441 M479_442 M479_442 glnB glnB 487145 487483 + nitrogen regulatory protein P-II [E] COG0347 Nitrogen regulatory protein PII gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=M479_442 M479_443 M479_443 M479_443 487652 488551 - hypothetical protein yhfZ C-terminal domain protein gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=M479_443 M479_444 M479_444 M479_444 488887 489666 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=M479_444 M479_445 M479_445 M479_445 489666 490688 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=M479_445 M479_446 M479_446 M479_446 490975 492165 - globin family protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=M479_446 M479_447 M479_447 M479_447 492706 493959 + beta-eliminating lyase family protein [E] COG0112 Glycine/serine hydroxymethyltransferase gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=M479_447 M479_448 M479_448 ail ail 494412 494954 + attachment invasion locus protein [M] COG3637 Opacity protein and related surface antigens gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=M479_448 M479_449 M479_449 M479_449 496478 497839 - PRD domain protein [K] COG3711 Transcriptional antiterminator gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=M479_449 M479_45 M479_45 M479_45 50806 51480 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=M479_45 M479_450 M479_450 M479_450 495324 496481 + lacY proton/sugar symporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=M479_450 M479_451 M479_451 M479_451 497990 498655 + hypothetical protein conserved hypothetical protein~[R] COG3683 ABC-type uncharacterized transport system%2C periplasmic component gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=M479_451 M479_452 M479_452 M479_452 498646 499668 + high-affinity nickel-transport family protein [R] COG2215 ABC-type uncharacterized transport system%2C permease component gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=M479_452 M479_453 M479_453 suhB suhB 499767 500570 - inositol-1-monophosphatase [G] COG0483 Archaeal fructose-1%2C6-bisphosphatase and related enzymes of inositol monophosphatase family gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=M479_453 M479_454 M479_454 M479_454 500689 501462 + RNA methyltransferase%2C TrmH%2C group 1 family protein rRNA_methyl_1: RNA methyltransferase%2C TrmH%2C group 1 family protein~[J] COG0565 rRNA methylase gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=M479_454 M479_455 M479_455 iscR iscR 501618 502112 + iron-sulfur cluster assembly transcription factor IscR iscR: iron-sulfur cluster assembly transcription factor IscR~[K] COG1959 Predicted transcriptional regulator gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=M479_455 M479_456 M479_456 iscS iscS 502166 503395 + cysteine desulfurase IscS iscS: cysteine desulfurase IscS~[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=M479_456 M479_457 M479_457 nifU nifU 503426 503812 + nifU-like protein [C] COG0822 NifU homolog involved in Fe-S cluster formation gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=M479_457 M479_458 M479_458 iscA iscA 504082 504405 + iron-sulfur cluster assembly protein IscA iscA: iron-sulfur cluster assembly protein IscA~[S] COG0316 Uncharacterized conserved protein gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=M479_458 M479_459 M479_459 hscB hscB 504516 505040 + Fe-S protein assembly co-chaperone HscB hscB: Fe-S protein assembly co-chaperone HscB~[O] COG1076 DnaJ-domain-containing proteins 1 gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=M479_459 M479_46 M479_46 M479_46 51480 52220 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=M479_46 M479_460 M479_460 hscA hscA 505283 507181 + Fe-S protein assembly chaperone HscA hscA: Fe-S protein assembly chaperone HscA~[O] COG0443 Molecular chaperone gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=M479_460 M479_461 M479_461 fdx fdx 507184 507519 + ferredoxin%2C 2Fe-2S type%2C ISC system fdx_isc: ferredoxin%2C 2Fe-2S type%2C ISC system~[C] COG0633 Ferredoxin gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=M479_461 M479_462 M479_462 iscX iscX 507549 507749 + FeS assembly protein IscX iscX_yfhJ: FeS assembly protein IscX~[S] COG2975 Uncharacterized protein conserved in bacteria gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=M479_462 M479_463 M479_463 M479_463 507889 509187 + peptidase family protein [E] COG0260 Leucyl aminopeptidase gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=M479_463 M479_464 M479_464 M479_464 509266 510219 + hypothetical protein sseB C-terminal domain protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=M479_464 M479_465 M479_465 M479_465 510557 510877 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=M479_465 M479_466 M479_466 M479_466 510843 514001 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=M479_466 M479_467 M479_467 M479_467 514559 519037 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=M479_467 M479_468 M479_468 M479_468 519753 522173 + beta/Gamma crystallin family protein gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=M479_468 M479_469 M479_469 M479_469 522500 522928 + nucleoside diphosphate kinase family protein [F] COG0105 Nucleoside diphosphate kinase gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=M479_469 M479_47 M479_47 M479_47 52394 53311 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=M479_47 M479_470 M479_470 rlmN rlmN 523190 524386 + 23S rRNA (adenine(2503)-C(2))-methyltransferase rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase~[R] COG0820 Predicted Fe-S-cluster redox enzyme gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=M479_470 M479_471 M479_471 pilF pilF 524540 525289 + type IV pilus biogenesis/stability protein PilW type_IV_pilW: type IV pilus biogenesis/stability protein PilW~[NU] COG3063 Tfp pilus assembly protein PilF gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=M479_471 M479_472 M479_472 M479_472 525279 526316 + helix-turn-helix family protein [S] COG1426 Uncharacterized protein conserved in bacteria gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=M479_472 M479_473 M479_473 ispG ispG 526378 527505 + 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~[I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=M479_473 M479_474 M479_474 hisS hisS 527714 528988 + histidine--tRNA ligase hisS: histidine--tRNA ligase~[J] COG0124 Histidyl-tRNA synthetase gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=M479_474 M479_475 M479_475 M479_475 529002 529637 + tetratricopeptide repeat family protein [S] COG2976 Uncharacterized protein conserved in bacteria gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=M479_475 M479_476 M479_476 yfgL yfgL 529649 530830 + outer membrane assembly lipoprotein YfgL assembly_YfgL: outer membrane assembly lipoprotein YfgL~[S] COG1520 FOG: WD40-like repeat gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=M479_476 M479_477 M479_477 engA engA 530978 532465 + ribosome-associated GTPase EngA GTPase_EngA: ribosome-associated GTPase EngA~[R] COG1160 Predicted GTPases gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=M479_477 M479_478 M479_478 M479_478 532812 533768 + membrane transport family protein [R] COG0679 Predicted permeases gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=M479_478 M479_479 M479_479 M479_479 533817 534041 + zinc-ribbons family protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=M479_479 M479_48 M479_48 lnt lnt 54076 55623 - apolipoprotein N-acyltransferase lnt: apolipoprotein N-acyltransferase~[M] COG0815 Apolipoprotein N-acyltransferase gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=M479_48 M479_480 M479_480 xseA xseA 534174 535553 - exodeoxyribonuclease VII%2C large subunit xseA: exodeoxyribonuclease VII%2C large subunit~[L] COG1570 Exonuclease VII%2C large subunit gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=M479_480 M479_481 M479_481 guaB guaB 535723 537186 + inosine-5'-monophosphate dehydrogenase IMP_dehydrog: inosine-5'-monophosphate dehydrogenase~[F] COG0516 IMP dehydrogenase/GMP reductase gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=M479_481 M479_482 M479_482 guaA guaA 537366 538943 + GMP synthase guaA_Nterm: GMP synthase (glutamine-hydrolyzing)%2C N-terminal domain~[F] COG0519 GMP synthase%2C PP-ATPase domain/subunit gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=M479_482 M479_483 M479_483 M479_483 539318 539776 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=M479_483 M479_484 M479_484 M479_484 539936 540415 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=M479_484 M479_485 M479_485 M479_485 540701 540889 + putative membrane protein gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=M479_485 M479_486 M479_486 M479_486 540901 541296 - hypothetical protein conserved hypothetical protein gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=M479_486 M479_487 M479_487 M479_487 541358 541753 - hypothetical protein conserved hypothetical protein gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=M479_487 M479_488 M479_488 M479_488 541817 542212 - hypothetical protein conserved hypothetical protein gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=M479_488 M479_489 M479_489 M479_489 542209 542853 - putative membrane protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=M479_489 M479_49 M479_49 corC corC 55631 56509 - magnesium and cobalt efflux protein CorC [P] COG4535 Putative Mg2+ and Co2+ transporter CorC gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=M479_49 M479_490 M479_490 M479_490 542935 544143 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=M479_490 M479_491 M479_491 M479_491 544165 544452 - hypothetical protein conserved hypothetical protein gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=M479_491 M479_492 M479_492 M479_492 544511 544978 - hypothetical protein conserved hypothetical protein gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=M479_492 M479_493 M479_493 thiD thiD 545500 546300 + hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase~[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=M479_493 M479_494 M479_494 M479_494 546362 547249 - hypothetical protein conserved hypothetical protein gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=M479_494 M479_495 M479_495 ivy ivy 547480 547989 + inhibitor of vertebrate lysozyme domain protein gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=M479_495 M479_496 M479_496 yegS yegS 548276 549166 - lipid kinase YegS lip_kinase_YegS: lipid kinase YegS~[IR] COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=M479_496 M479_497 M479_497 M479_497 549802 551196 - peptidase U32 family protein [O] COG0826 Collagenase and related proteases gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=M479_497 M479_498 M479_498 M479_498 551471 551809 - hypothetical protein conserved hypothetical protein~[S] COG3422 Uncharacterized conserved protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=M479_498 M479_499 M479_499 M479_499 551946 552665 - response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=M479_499 M479_5 M479_5 M479_5 9978 10526 - hypothetical protein conserved hypothetical protein~[S] COG3477 Predicted periplasmic/secreted protein gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=M479_5 M479_50 M479_50 M479_50 56627 57100 - putative rRNA maturation factor YbeY [R] COG0319 Predicted metal-dependent hydrolase gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=M479_50 M479_500 M479_500 M479_500 552675 554060 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=M479_500 M479_501 M479_501 M479_501 554091 555488 - drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein efflux_EmrB: drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=M479_501 M479_502 M479_502 M479_502 555522 557777 - acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=M479_502 M479_503 M479_503 M479_503 557734 558579 - acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=M479_503 M479_504 M479_504 M479_504 558576 561734 - acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=M479_504 M479_505 M479_505 M479_505 561734 563068 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=M479_505 M479_506 M479_506 M479_506 563432 564517 - polyamine ABC transporter%2C ATP-binding family protein potA: polyamine ABC transporter%2C ATP-binding family protein~[E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=M479_506 M479_507 M479_507 M479_507 564900 566405 - aminotransferase class I and II family protein [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=M479_507 M479_508 M479_508 gabT gabT 566587 567876 + 4-aminobutyrate transaminase GABAtrnsam: 4-aminobutyrate transaminase~[E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=M479_508 M479_509 M479_509 M479_509 567929 568957 + bacterial extracellular solute-binding family protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=M479_509 M479_51 M479_51 ybeZ ybeZ 57097 58152 - phoH-like protein [T] COG1702 Phosphate starvation-inducible protein PhoH%2C predicted ATPase gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=M479_51 M479_510 M479_510 M479_510 569004 570269 + binding--dependent transport system inner membrane component family protein [E] COG1176 ABC-type spermidine/putrescine transport system%2C permease component I gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=M479_510 M479_511 M479_511 M479_511 570331 571179 + binding--dependent transport system inner membrane component family protein [E] COG1177 ABC-type spermidine/putrescine transport system%2C permease component II gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=M479_511 M479_512 M479_512 M479_512 571451 572803 - hsp70 family protein [O] COG0443 Molecular chaperone gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=M479_512 M479_513 M479_513 mgtE mgtE 572943 574418 - magnesium transporter mgtE: magnesium transporter~[P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=M479_513 M479_514 M479_514 M479_514 574794 576353 - ppx/GppA phosphatase family protein [FP] COG0248 Exopolyphosphatase gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=M479_514 M479_515 M479_515 ppk1 ppk1 576364 578427 - polyphosphate kinase 1 poly_P_kin: polyphosphate kinase 1~[P] COG0855 Polyphosphate kinase gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=M479_515 M479_516 M479_516 M479_516 578698 580929 + binding--dependent transport system inner membrane component family protein [R] COG4590 ABC-type uncharacterized transport system%2C permease component gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=M479_516 M479_517 M479_517 pstA pstA 581040 582626 + phosphate ABC transporter%2C permease protein PstA 3a0107s02c: phosphate ABC transporter%2C permease protein PstA~[P] COG4985 ABC-type phosphate transport system%2C auxiliary component gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=M479_517 M479_518 M479_518 pstB pstB 582654 583466 + phosphate ABC transporter%2C ATP-binding protein 3a0107s01c2: phosphate ABC transporter%2C ATP-binding protein~[P] COG1117 ABC-type phosphate transport system%2C ATPase component gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=M479_518 M479_519 M479_519 fliU fliU 583680 584060 + flagellar biosynthetic protein fliU gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=M479_519 M479_52 M479_52 miaB miaB 58497 59921 - tRNA-i(6)A37 thiotransferase enzyme MiaB miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB~[J] COG0621 2-methylthioadenine synthetase gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=M479_52 M479_520 M479_520 M479_520 584147 584869 + putative n-methylation of lysine residues in flagellin gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=M479_520 M479_521 M479_521 speG speG 584963 585508 - spermidine N(1)-acetyltransferase [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=M479_521 M479_522 M479_522 purN purN 585737 586375 - phosphoribosylglycinamide formyltransferase purN: phosphoribosylglycinamide formyltransferase~[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=M479_522 M479_523 M479_523 purM purM 586490 587533 - phosphoribosylformylglycinamidine cyclo-ligase purM: phosphoribosylformylglycinamidine cyclo-ligase~[F] COG0150 Phosphoribosylaminoimidazole (AIR) synthetase gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=M479_523 M479_524 M479_524 upp upp 587930 588556 + uracil phosphoribosyltransferase upp: uracil phosphoribosyltransferase~[F] COG0035 Uracil phosphoribosyltransferase gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=M479_524 M479_525 M479_525 M479_525 588732 589190 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=M479_525 M479_526 M479_526 hda hda 589378 590085 + DnaA regulatory inactivator Hda dnaA_homol_Hda: DnaA regulatory inactivator Hda~[L] COG0593 ATPase involved in DNA replication initiation gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=M479_526 M479_527 M479_527 arsC arsC 590297 590653 - arsenate reductase arsC: arsenate reductase~[P] COG1393 Arsenate reductase and related proteins%2C glutaredoxin family gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=M479_527 M479_528 M479_528 M479_528 590760 592244 - peptidase M48 family protein [R] COG4783 Putative Zn-dependent protease%2C contains TPR repeats gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=M479_528 M479_529 M479_529 M479_529 592575 593639 + hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=M479_529 M479_53 M479_53 M479_53 60163 61344 + ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein ubi-OHases: ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=M479_53 M479_530 M479_530 M479_530 594239 594934 + hypothetical protein conserved hypothetical protein gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=M479_530 M479_531 M479_531 M479_531 594938 595357 + putative exported protein gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=M479_531 M479_532 M479_532 M479_532 595601 596071 - putative peroxiredoxin bcp [O] COG1225 Peroxiredoxin gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=M479_532 M479_533 M479_533 M479_533 596074 596643 - ACT domain protein [E] COG2716 Glycine cleavage system regulatory protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=M479_533 M479_534 M479_534 dapA dapA 596808 597689 + 4-hydroxy-tetrahydrodipicolinate synthase dapA: 4-hydroxy-tetrahydrodipicolinate synthase~[EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=M479_534 M479_535 M479_535 M479_535 597707 598765 + nlpB/DapX lipofamily protein [M] COG3317 Uncharacterized lipoprotein gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=M479_535 M479_536 M479_536 M479_536 598940 599398 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=M479_536 M479_537 M479_537 purC purC 599546 600259 + phosphoribosylaminoimidazolesuccinocarboxamide synthase purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase~[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=M479_537 M479_538 M479_538 M479_538 600478 601344 + neutral zinc metallopeptidase family protein [R] COG2321 Predicted metalloprotease gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=M479_538 M479_539 M479_539 M479_539 601438 601890 + hypothetical protein conserved hypothetical protein~[S] COG2707 Predicted membrane protein gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=M479_539 M479_54 M479_54 M479_54 61738 61812 - tRNA-Gln tRNA gene53 http://www.ncbi.nlm.nih.gov/gene/?term=M479_54 M479_540 M479_540 M479_540 601892 603943 + acetyltransferase family protein [R] COG1444 Predicted P-loop ATPase fused to an acetyltransferase gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=M479_540 M479_541 M479_541 M479_541 604197 604391 - hypothetical protein conserved hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=M479_541 M479_542 M479_542 M479_542 604459 605109 - D-alanyl-D-alanine carboxypeptidase family protein [M] COG1876 D-alanyl-D-alanine carboxypeptidase gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=M479_542 M479_543 M479_543 dapE dapE 605133 606260 - succinyl-diaminopimelate desuccinylase dapE_proteo: succinyl-diaminopimelate desuccinylase~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=M479_543 M479_544 M479_544 M479_544 606262 606660 - transcriptional regulator%2C Spx/MgsR family protein arsC_related: transcriptional regulator%2C Spx/MgsR family protein~[P] COG1393 Arsenate reductase and related proteins%2C glutaredoxin family gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=M479_544 M479_545 M479_545 M479_545 606820 607293 - tetratricopeptide repeat family protein [R] COG0457 FOG: TPR repeat gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=M479_545 M479_546 M479_546 M479_546 607604 608692 + bacterial extracellular solute-binding family protein [P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=M479_546 M479_547 M479_547 M479_547 608787 610556 + binding--dependent transport system inner membrane component family protein [P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=M479_547 M479_548 M479_548 M479_548 610549 611619 + ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=M479_548 M479_549 M479_549 M479_549 612100 613770 + type I phosphodiesterase / nucleotide pyrophosphatase family protein [P] COG3119 Arylsulfatase A and related enzymes gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=M479_549 M479_55 M479_55 M479_55 61818 61894 - tRNA-Met tRNA gene54 http://www.ncbi.nlm.nih.gov/gene/?term=M479_55 M479_550 M479_550 M479_550 613828 615003 + anaerobic sulfatase maturase sulfatase_rSAM: anaerobic sulfatase maturase~[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=M479_550 M479_551 M479_551 M479_551 615751 616299 - hypothetical protein conserved hypothetical protein~[R] COG1988 Predicted membrane-bound metal-dependent hydrolases gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=M479_551 M479_552 M479_552 M479_552 616588 617172 - hypothetical protein conserved hypothetical protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=M479_552 M479_553 M479_553 M479_553 617403 620534 - RND transporter%2C hydrophobe/amphiphile efflux-1 family protein 2A0602: RND transporter%2C hydrophobe/amphiphile efflux-1 family protein~[V] COG0841 Cation/multidrug efflux pump gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=M479_553 M479_554 M479_554 M479_554 620949 621227 + winged helix-turn helix family protein [S] COG4519 Uncharacterized protein conserved in bacteria gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=M479_554 M479_555 M479_555 M479_555 621240 621869 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=M479_555 M479_556 M479_556 napF napF 622702 623205 + ferredoxin-type protein NapF napF: ferredoxin-type protein NapF~[C] COG1145 Ferredoxin gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=M479_556 M479_557 M479_557 M479_557 623195 623461 + napD family protein [P] COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=M479_557 M479_558 M479_558 napA napA 623458 625950 + periplasmic nitrate reductase%2C large subunit NAPA: periplasmic nitrate reductase%2C large subunit~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=M479_558 M479_559 M479_559 M479_559 626099 626500 + nitrate reductase cytochrome c-type subunit family protein [C] COG3043 Nitrate reductase cytochrome c-type subunit gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=M479_559 M479_56 M479_56 M479_56 61927 62001 - tRNA-Gln tRNA gene55 http://www.ncbi.nlm.nih.gov/gene/?term=M479_56 M479_560 M479_560 M479_560 626528 627127 + periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family protein napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family protein~[C] COG3005 Nitrate/TMAO reductases%2C membrane-bound tetraheme cytochrome c subunit gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=M479_560 M479_561 M479_561 M479_561 627311 627907 + nudix-type nucleoside diphosphatase%2C YffH/AdpP family protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=M479_561 M479_562 M479_562 M479_562 628103 630382 + malic enzyme%2C NAD binding domain protein [C] COG0281 Malic enzyme gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=M479_562 M479_563 M479_563 M479_563 630533 630991 - hypothetical protein conserved hypothetical protein~[S] COG1671 Uncharacterized protein conserved in bacteria gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=M479_563 M479_564 M479_564 M479_564 630991 631920 - coproporphyrinogen III oxidase family protein [H] COG0408 Coproporphyrinogen III oxidase gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=M479_564 M479_565 M479_565 M479_565 632203 632628 + acetyltransferase domain protein [R] COG0456 Acetyltransferases gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=M479_565 M479_566 M479_566 M479_566 632810 632995 - hypothetical protein conserved hypothetical protein gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=M479_566 M479_567 M479_567 M479_567 633101 633517 + putative membrane protein gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=M479_567 M479_568 M479_568 M479_568 633609 635888 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=M479_568 M479_569 M479_569 M479_569 636375 636788 - OB-fold nucleic acid binding domain protein [S] COG3111 Uncharacterized conserved protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=M479_569 M479_57 M479_57 M479_57 62085 62159 - tRNA-Gln tRNA gene56 http://www.ncbi.nlm.nih.gov/gene/?term=M479_57 M479_570 M479_570 M479_570 637147 637557 + hypothetical protein conserved hypothetical protein gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=M479_570 M479_571 M479_571 M479_571 637496 637759 + hypothetical protein conserved hypothetical protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=M479_571 M479_572 M479_572 M479_572 637937 638836 + Dyp-type peroxidase family protein dyp_perox_fam: Dyp-type peroxidase family protein~[P] COG2837 Predicted iron-dependent peroxidase gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=M479_572 M479_573 M479_573 M479_573 638934 639827 - dihydrodipicolinate synthetase family protein [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=M479_573 M479_574 M479_574 M479_574 639890 640591 - N-acetylmannosamine-6-phosphate epimerase family protein [G] COG3010 Putative N-acetylmannosamine-6-phosphate epimerase gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=M479_574 M479_575 M479_575 yopM yopM 640797 641924 - outer membrane protein yopM [S] COG4886 Leucine-rich repeat (LRR) protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=M479_575 M479_576 M479_576 nanK nanK 642193 643065 + N-acetylmannosamine kinase [KG] COG1940 Transcriptional regulator/sugar kinase gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=M479_576 M479_577 M479_577 M479_577 643147 643617 + yhcH/YjgK/YiaL family protein [G] COG2731 Beta-galactosidase%2C beta subunit gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=M479_577 M479_578 M479_578 M479_578 643806 644684 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=M479_578 M479_579 M479_579 M479_579 645289 646821 + putative sialic acid transporter [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=M479_579 M479_58 M479_58 M479_58 62189 62273 - tRNA-Leu tRNA gene57 http://www.ncbi.nlm.nih.gov/gene/?term=M479_58 M479_580 M479_580 M479_580 647136 648173 + sulfate ABC transporter%2C sulfate-binding family protein 3a0106s03: sulfate ABC transporter%2C sulfate-binding family protein~[P] COG4150 ABC-type sulfate transport system%2C periplasmic component gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=M479_580 M479_581 M479_581 cysT cysT 648173 649006 + sulfate ABC transporter%2C permease protein CysT permease_CysT: sulfate ABC transporter%2C permease protein CysT~[O] COG0555 ABC-type sulfate transport system%2C permease component gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=M479_581 M479_582 M479_582 cysW cysW 649006 649881 + sulfate ABC transporter%2C permease protein CysW permease_CysW: sulfate ABC transporter%2C permease protein CysW~[P] COG4208 ABC-type sulfate transport system%2C permease component gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=M479_582 M479_583 M479_583 cysA cysA 649871 650962 + sulfate ABC transporter%2C ATP-binding family protein 3a0106s01: sulfate ABC transporter%2C ATP-binding family protein~[P] COG1118 ABC-type sulfate/molybdate transport systems%2C ATPase component gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=M479_583 M479_584 M479_584 cysM cysM 651133 652011 + cysteine synthase B cysM: cysteine synthase B~[E] COG0031 Cysteine synthase gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=M479_584 M479_585 M479_585 M479_585 652256 653488 + hypothetical protein conserved hypothetical protein~[S] COG4886 Leucine-rich repeat (LRR) protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=M479_585 M479_586 M479_586 phoP phoP 653869 654576 - alkaline phosphatase synthesis transcriptional regulatory protein phoP [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=M479_586 M479_587 M479_587 M479_587 654573 656117 - his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=M479_587 M479_588 M479_588 M479_588 656350 657768 - von Willebrand factor type A domain protein [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=M479_588 M479_589 M479_589 M479_589 658468 659649 + C-S lyase family protein C_S_lyase_PatB: C-S lyase family protein~[E] COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=M479_589 M479_59 M479_59 M479_59 62281 62357 - tRNA-Met tRNA gene58 http://www.ncbi.nlm.nih.gov/gene/?term=M479_59 M479_590 M479_590 M479_590 659683 659874 + hypothetical protein creatinase/Prolidase N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=M479_590 M479_591 M479_591 M479_591 659895 660902 + hypothetical protein creatinase/Prolidase N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=M479_591 M479_592 M479_592 M479_592 661045 661242 + hypothetical protein conserved hypothetical protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=M479_592 M479_593 M479_593 M479_593 661239 662699 + putative membrane protein [ER] COG0591 Na+/proline symporter gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=M479_593 M479_594 M479_594 M479_594 662759 664405 + FAD dependent oxidoreductase family protein [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=M479_594 M479_595 M479_595 M479_595 664660 666669 - ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=M479_595 M479_596 M479_596 M479_596 666700 667905 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=M479_596 M479_597 M479_597 M479_597 668093 668776 + response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=M479_597 M479_598 M479_598 M479_598 668802 670151 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=M479_598 M479_599 M479_599 M479_599 670237 670431 + hypothetical protein conserved hypothetical protein gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=M479_599 M479_6 M479_6 M479_6 11279 12133 - SIS domain protein [K] COG1737 Transcriptional regulators gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=M479_6 M479_60 M479_60 asnB asnB 62815 64479 - asparagine synthase asn_synth_AEB: asparagine synthase~[E] COG0367 Asparagine synthase (glutamine-hydrolyzing) gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=M479_60 M479_600 M479_600 M479_600 670421 670879 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=M479_600 M479_601 M479_601 crr crr 671022 671531 - glucose-specific phosphotransferase enzyme IIA component [G] COG2190 Phosphotransferase system IIA components gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=M479_601 M479_602 M479_602 ptsP ptsP 671580 673307 - phosphoenolpyruvate-protein phosphotransferase PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase~[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=M479_602 M479_603 M479_603 ptsH ptsH 673356 673613 - phosphocarrier protein HPr [G] COG1925 Phosphotransferase system%2C HPr-related proteins gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=M479_603 M479_604 M479_604 cysK cysK 674112 675080 - cysteine synthase A cysK: cysteine synthase A~[E] COG0031 Cysteine synthase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=M479_604 M479_605 M479_605 cysZ cysZ 675237 675971 - protein CysZ [E] COG2981 Uncharacterized protein involved in cysteine biosynthesis gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=M479_605 M479_606 M479_606 zipA zipA 676220 677206 + cell division protein ZipA septum_zipA: cell division protein ZipA~[D] COG3115 Cell division protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=M479_606 M479_607 M479_607 ligA ligA 677297 679309 + DNA ligase%2C NAD-dependent dnlj: DNA ligase%2C NAD-dependent~[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=M479_607 M479_608 M479_608 M479_608 679329 679544 + hypothetical protein conserved hypothetical protein~[S] COG3530 Uncharacterized protein conserved in bacteria gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=M479_608 M479_609 M479_609 M479_609 679645 679992 - flxA-like family protein gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=M479_609 M479_61 M479_61 M479_61 64834 65586 - HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[G] COG0647 Predicted sugar phosphatases of the HAD superfamily gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=M479_61 M479_610 M479_610 M479_610 680124 680729 - hypothetical protein conserved hypothetical protein~[S] COG3575 Uncharacterized protein conserved in bacteria gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=M479_610 M479_611 M479_611 M479_611 680996 681454 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=M479_611 M479_612 M479_612 M479_612 681635 681710 - tRNA-Ala tRNA gene611 http://www.ncbi.nlm.nih.gov/gene/?term=M479_612 M479_613 M479_613 gltX gltX 681942 683357 - glutamate--tRNA ligase gltX_bact: glutamate--tRNA ligase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=M479_613 M479_614 M479_614 M479_614 683632 683707 + tRNA-Val tRNA gene613 http://www.ncbi.nlm.nih.gov/gene/?term=M479_614 M479_615 M479_615 M479_615 683744 683819 + tRNA-Val tRNA gene614 http://www.ncbi.nlm.nih.gov/gene/?term=M479_615 M479_616 M479_616 M479_616 683864 683939 + tRNA-Val tRNA gene615 http://www.ncbi.nlm.nih.gov/gene/?term=M479_616 M479_617 M479_617 M479_617 684139 684214 + tRNA-Lys tRNA gene616 http://www.ncbi.nlm.nih.gov/gene/?term=M479_617 M479_618 M479_618 M479_618 684695 685762 - nucleoside recognition family protein [F] COG1972 Nucleoside permease gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=M479_618 M479_619 M479_619 M479_619 686213 687442 + metal ion transporter%2C metal ion family protein nramp: metal ion transporter%2C metal ion family protein~[P] COG1914 Mn2+ and Fe2+ transporters of the NRAMP family gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=M479_619 M479_62 M479_62 M479_62 65659 66885 - marR family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=M479_62 M479_620 M479_620 M479_620 687535 687948 - hypothetical protein conserved hypothetical protein gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=M479_620 M479_621 M479_621 M479_621 688119 689108 - aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=M479_621 M479_622 M479_622 M479_622 689244 690122 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=M479_622 M479_623 M479_623 M479_623 690225 690701 + bacterial Transmembrane Pair family protein [S] COG4125 Predicted membrane protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=M479_623 M479_624 M479_624 glk glk 690882 691853 + glucokinase glk: glucokinase~[G] COG0837 Glucokinase gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=M479_624 M479_625 M479_625 M479_625 691931 693178 - phytanoyl-CoA dioxygenase family protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=M479_625 M479_626 M479_626 M479_626 693444 694679 + aminotransferase class I and II family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=M479_626 M479_627 M479_627 M479_627 694905 695429 + hypothetical protein conserved hypothetical protein~[C] COG3038 Cytochrome B561 gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=M479_627 M479_628 M479_628 M479_628 695524 695955 - hypothetical protein conserved hypothetical protein~[S] COG1598 Uncharacterized conserved protein gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=M479_628 M479_629 M479_629 M479_629 696545 697216 + tolB amino-terminal domain protein [M] COG1462 Uncharacterized protein involved in formation of curli polymers gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=M479_629 M479_63 M479_63 nagA nagA 66902 68047 - N-acetylglucosamine-6-phosphate deacetylase nagA: N-acetylglucosamine-6-phosphate deacetylase~[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=M479_63 M479_630 M479_630 M479_630 697243 697599 + putative lipoprotein [S] COG4259 Uncharacterized protein conserved in bacteria gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=M479_630 M479_631 M479_631 M479_631 697596 698252 + hypothetical protein conserved hypothetical protein~[S] COG4380 Uncharacterized protein conserved in bacteria gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=M479_631 M479_632 M479_632 M479_632 698498 699067 - 4Fe-4S binding domain protein [C] COG1145 Ferredoxin gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=M479_632 M479_633 M479_633 M479_633 699064 699660 - nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=M479_633 M479_634 M479_634 M479_634 700018 700794 - DMSO reductase anchor subunit family protein [R] COG3302 DMSO reductase anchor subunit gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=M479_634 M479_635 M479_635 dmsB dmsB 700796 701413 - dimethylsulfoxide reductase%2C chain B DMSO_dmsB: dimethylsulfoxide reductase%2C chain B~[C] COG0437 Fe-S-cluster-containing hydrogenase components 1 gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=M479_635 M479_636 M479_636 M479_636 701425 703851 - anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family protein dmsA_ynfE: anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family protein~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=M479_636 M479_637 M479_637 M479_637 704682 705530 + hypothetical protein conserved hypothetical protein gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=M479_637 M479_638 M479_638 M479_638 705760 706239 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=M479_638 M479_639 M479_639 M479_639 706706 707230 + hypothetical protein conserved hypothetical protein~[S] COG4331 Predicted membrane protein gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=M479_639 M479_64 M479_64 nagB nagB 68067 68867 - glucosamine-6-phosphate deaminase nagB: glucosamine-6-phosphate deaminase~[G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=M479_64 M479_640 M479_640 M479_640 707303 708352 - ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=M479_640 M479_641 M479_641 M479_641 708349 709935 - binding--dependent transport system inner membrane component family protein [P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=M479_641 M479_642 M479_642 yfuA yfuA 709991 711010 - yfuA [P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=M479_642 M479_643 M479_643 mltB mltB 711339 712433 + lytic murein transglycosylase B mltB: lytic murein transglycosylase B~[M] COG2951 Membrane-bound lytic murein transglycosylase B gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=M479_643 M479_644 M479_644 M479_644 713695 714297 + bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=M479_644 M479_645 M479_645 M479_645 714655 715137 - hypothetical protein conserved hypothetical protein~[S] COG5435 Uncharacterized conserved protein gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=M479_645 M479_646 M479_646 M479_646 715134 716816 - ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=M479_646 M479_647 M479_647 M479_647 716817 717482 - hypothetical protein conserved hypothetical protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=M479_647 M479_648 M479_648 M479_648 717479 718816 - glycosyltransferase family protein gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=M479_648 M479_649 M479_649 M479_649 718856 719887 - fimbrial family protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=M479_649 M479_65 M479_65 nagE nagE 69267 71300 + PTS system%2C N-acetylglucosamine-specific IIBC component PTS-II-BC-nag: PTS system%2C N-acetylglucosamine-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=M479_65 M479_650 M479_650 M479_650 719894 721075 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=M479_650 M479_651 M479_651 M479_651 721349 722194 - hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=M479_651 M479_652 M479_652 M479_652 722194 724029 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=M479_652 M479_653 M479_653 clpV clpV 724857 727532 + type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=M479_653 M479_654 M479_654 M479_654 727733 728278 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=M479_654 M479_655 M479_655 M479_655 728435 729196 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=M479_655 M479_656 M479_656 M479_656 729324 730874 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=M479_656 M479_657 M479_657 M479_657 730896 732104 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=M479_657 M479_658 M479_658 M479_658 732162 733319 + outer membrane usher family protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=M479_658 M479_659 M479_659 M479_659 733304 733912 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=M479_659 M479_66 M479_66 glnS glnS 71515 73182 + glutamine--tRNA ligase glnS: glutamine--tRNA ligase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=M479_66 M479_660 M479_660 M479_660 734017 734541 + hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=M479_660 M479_661 M479_661 M479_661 734565 736067 + hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=M479_661 M479_662 M479_662 M479_662 736393 736878 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=M479_662 M479_663 M479_663 M479_663 737152 737691 + type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=M479_663 M479_664 M479_664 M479_664 737695 739044 + hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=M479_664 M479_665 M479_665 M479_665 739077 739709 + type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=M479_665 M479_666 M479_666 M479_666 739723 740745 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=M479_666 M479_667 M479_667 M479_667 740745 741524 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=M479_667 M479_668 M479_668 M479_668 741540 742376 + type VI secretion system peptidoglycan-associated domain protein type_VI_ompA: type VI secretion system peptidoglycan-associated domain~[N] COG1360 Flagellar motor protein gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=M479_668 M479_669 M479_669 M479_669 742385 744790 + intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=M479_669 M479_67 M479_67 M479_67 73888 75309 + outer membrane porin%2C OprD family protein gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=M479_67 M479_670 M479_670 M479_670 744832 746211 + intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=M479_670 M479_671 M479_671 M479_671 746538 748784 + Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=M479_671 M479_672 M479_672 M479_672 748883 749143 + PAAR motif family protein [M] COG3209 Rhs family protein gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=M479_672 M479_673 M479_673 M479_673 749149 749991 + hypothetical protein conserved hypothetical protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=M479_673 M479_674 M479_674 M479_674 750011 750817 + impE family protein [R] COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=M479_674 M479_675 M479_675 M479_675 750898 751377 + lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=M479_675 M479_676 M479_676 M479_676 751402 751749 + putative membrane protein gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=M479_676 M479_677 M479_677 M479_677 751824 752165 - phnA Zinc-Ribbon family protein [P] COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=M479_677 M479_678 M479_678 M479_678 752541 754580 - hypothetical protein conserved hypothetical protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=M479_678 M479_679 M479_679 M479_679 754585 755127 - lemA family protein [S] COG1704 Uncharacterized conserved protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=M479_679 M479_68 M479_68 M479_68 75637 76260 + putative carbohydrate binding domain protein [G] COG3525 N-acetyl-beta-hexosaminidase gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=M479_68 M479_680 M479_680 M479_680 755414 755488 + tRNA-Arg tRNA gene679 http://www.ncbi.nlm.nih.gov/gene/?term=M479_680 M479_681 M479_681 M479_681 755743 756210 + hypothetical protein conserved hypothetical protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=M479_681 M479_682 M479_682 ccmA ccmA 756655 757311 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[O] COG4133 ABC-type transport system involved in cytochrome c biogenesis%2C ATPase component gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=M479_682 M479_683 M479_683 ccmB ccmB 757281 757940 + heme exporter protein CcmB ccmB: heme exporter protein CcmB~[O] COG2386 ABC-type transport system involved in cytochrome c biogenesis%2C permease component gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=M479_683 M479_684 M479_684 ccmC ccmC 758003 758740 + heme exporter CcmC family protein ccmC: heme exporter CcmC family protein~[O] COG0755 ABC-type transport system involved in cytochrome c biogenesis%2C permease component gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=M479_684 M479_685 M479_685 ccmD ccmD 758737 759039 + heme exporter protein CcmD cytochro_ccmD: heme exporter protein CcmD~[U] COG3114 Heme exporter protein D gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=M479_685 M479_686 M479_686 ccmE ccmE 759036 759530 + cytochrome c-type biogenesis protein CcmE [O] COG2332 Cytochrome c-type biogenesis protein CcmE gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=M479_686 M479_687 M479_687 ccmF ccmF 759527 761497 + cytochrome c-type biogenesis protein CcmF nrfE: cytochrome c-type biogenesis protein CcmF~[O] COG1138 Cytochrome c biogenesis factor gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=M479_687 M479_688 M479_688 dsbE dsbE 761494 762060 + periplasmic thiol:disulfide oxidoreductase%2C DsbE subfamily protein dsbE: periplasmic thiol:disulfide oxidoreductases%2C DsbE subfamily protein~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=M479_688 M479_689 M479_689 M479_689 762057 762554 + cytochrome C biogenesis family protein [O] COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=M479_689 M479_69 M479_69 chb chb 76238 78301 + chitobiase [G] COG3525 N-acetyl-beta-hexosaminidase gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=M479_69 M479_690 M479_690 ccmI ccmI 762554 763780 + cytochrome c-type biogenesis protein CcmI cytochro_ccmI: cytochrome c-type biogenesis protein CcmI~[O] COG4235 Cytochrome c biogenesis factor gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=M479_690 M479_691 M479_691 M479_691 763816 764580 + putative phospholipid-binding lipoprotein mlaA [M] COG2853 Surface lipoprotein gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=M479_691 M479_692 M479_692 M479_692 764687 765952 - outer membrane transport family protein [I] COG2067 Long-chain fatty acid transport protein gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=M479_692 M479_693 M479_693 M479_693 766366 766662 + hypothetical protein conserved hypothetical family protein~[S] COG3691 Uncharacterized protein conserved in bacteria gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=M479_693 M479_694 M479_694 fadI fadI 766949 768259 + acetyl-CoA C-acyltransferase FadI fadI: acetyl-CoA C-acyltransferase FadI~[I] COG0183 Acetyl-CoA acetyltransferase gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=M479_694 M479_695 M479_695 fadJ fadJ 768259 770583 + fatty oxidation complex%2C alpha subunit FadJ fadJ: fatty oxidation complex%2C alpha subunit FadJ~[I] COG1024 Enoyl-CoA hydratase/carnithine racemase gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=M479_695 M479_696 M479_696 sixA sixA 771152 771643 + phosphohistidine phosphatase SixA sixA: phosphohistidine phosphatase SixA~[T] COG2062 Phosphohistidine phosphatase SixA gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=M479_696 M479_697 M479_697 M479_697 771949 772479 - smr domain protein [S] COG2840 Uncharacterized protein conserved in bacteria gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=M479_697 M479_698 M479_698 prmB prmB 772849 773781 + (glutamine-N5) methyltransferase%2C ribosomal protein L3-specific L3_gln_methyl: -(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific~[J] COG2890 Methylase of polypeptide chain release factors gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=M479_698 M479_699 M479_699 aroC aroC 773858 774943 + chorismate synthase aroC: chorismate synthase~[E] COG0082 Chorismate synthase gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=M479_699 M479_7 M479_7 M479_7 12133 12270 - hypothetical protein gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=M479_7 M479_70 M479_70 fur fur 78742 79188 - ferric uptake regulation protein [P] COG0735 Fe2+/Zn2+ uptake regulation proteins gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=M479_70 M479_700 M479_700 M479_700 774970 775776 + penicillin-insensitive murein endopeptidase family protein [M] COG3770 Murein endopeptidase gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=M479_700 M479_701 M479_701 M479_701 775780 776586 + hypothetical protein conserved hypothetical protein~[R] COG0730 Predicted permeases gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=M479_701 M479_702 M479_702 M479_702 776686 777228 + hypothetical protein conserved hypothetical protein~[S] COG3101 Uncharacterized protein conserved in bacteria gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=M479_702 M479_703 M479_703 M479_703 777286 777564 + yfcL family protein gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=M479_703 M479_704 M479_704 mnmC mnmC 777742 779811 - tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC mnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC%2C C-terminal domain~[S] COG4121 Uncharacterized conserved protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=M479_704 M479_705 M479_705 fabB fabB 779983 781206 + 3-oxoacyl-[acyl-carrier-protein] synthase 1 [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=M479_705 M479_706 M479_706 M479_706 781614 782306 - aspartate racemase family protein asp_race: aspartate racemase family protein~[M] COG1794 Aspartate racemase gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=M479_706 M479_707 M479_707 smfA smfA 783097 783627 + fimbria A protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=M479_707 M479_708 M479_708 M479_708 783969 785006 - putative flagellar assembly regulatory protein%2CFlk gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=M479_708 M479_709 M479_709 M479_709 785291 786208 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=M479_709 M479_71 M479_71 M479_71 79555 80082 - flavodoxin flav_long: flavodoxin~[C] COG0716 Flavodoxins gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=M479_71 M479_710 M479_710 M479_710 786434 787219 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=M479_710 M479_711 M479_711 pdxB pdxB 787266 788393 + erythronate-4-phosphate dehydrogenase [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=M479_711 M479_712 M479_712 M479_712 788563 789573 + semialdehyde dehydrogenase%2C dimerization domain protein [E] COG0136 Aspartate-semialdehyde dehydrogenase gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=M479_712 M479_713 M479_713 truA truA 789660 790454 + tRNA pseudouridine(38-40) synthase hisT_truA: tRNA pseudouridine(38-40) synthase~[J] COG0101 Pseudouridylate synthase gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=M479_713 M479_714 M479_714 M479_714 790611 791273 + hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=M479_714 M479_715 M479_715 accD accD 791504 792418 + acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit accD: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~[I] COG0777 Acetyl-CoA carboxylase beta subunit gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=M479_715 M479_716 M479_716 folC folC 792667 793971 + bifunctional FolC family protein folC: bifunctional FolC family protein~[H] COG0285 Folylpolyglutamate synthase gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=M479_716 M479_717 M479_717 M479_717 794091 794813 + sporulation related domain protein [S] COG3147 Uncharacterized protein conserved in bacteria gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=M479_717 M479_718 M479_718 M479_718 795125 795634 + colicin V production family protein [R] COG1286 Uncharacterized membrane protein%2C required for colicin V production gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=M479_718 M479_719 M479_719 purF purF 795647 797164 + amidophosphoribosyltransferase purF: amidophosphoribosyltransferase~[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=M479_719 M479_72 M479_72 M479_72 80499 80786 - ribbon-helix-helix%2C copG family protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=M479_72 M479_720 M479_720 M479_720 797411 797983 + polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein~[H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=M479_720 M479_721 M479_721 hisJ hisJ 798508 799290 + histidine-binding periplasmic protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=M479_721 M479_722 M479_722 M479_722 799393 800079 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4215 ABC-type arginine transport system%2C permease component gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=M479_722 M479_723 M479_723 hisM hisM 800076 800792 + histidine transport system permease protein hisM [E] COG4160 ABC-type arginine/histidine transport system%2C permease component gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=M479_723 M479_724 M479_724 M479_724 800806 801603 + ABC transporter family protein [E] COG4598 ABC-type histidine transport system%2C ATPase component gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=M479_724 M479_725 M479_725 M479_725 801727 802635 - rmlD substrate binding domain protein [R] COG1090 Predicted nucleoside-diphosphate sugar epimerase gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=M479_725 M479_726 M479_726 M479_726 802989 803681 + EAL domain protein [T] COG2200 FOG: EAL domain gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=M479_726 M479_727 M479_727 yfcE yfcE 803869 804195 + phosphodiesterase yfcE [R] COG0622 Predicted phosphoesterase gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=M479_727 M479_728 M479_728 M479_728 804164 804457 + phosphodiesterase%2C family protein yfcE: phosphodiesterase%2C MJ0936 family protein~[R] COG0622 Predicted phosphoesterase gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=M479_728 M479_729 M479_729 M479_729 804679 805227 + NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=M479_729 M479_73 M479_73 M479_73 80961 81068 - hypothetical protein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=M479_73 M479_730 M479_730 M479_730 805344 806600 - PTS system sugar-specific permease component family protein [S] COG3037 Uncharacterized protein conserved in bacteria gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=M479_730 M479_731 M479_731 M479_731 806613 806900 - PTS system%2C Lactose/Cellobiose specific IIB subunit [G] COG3414 Phosphotransferase system%2C galactitol-specific IIB component gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=M479_731 M479_732 M479_732 ptsN1 ptsN1 807069 807512 - phosphotransferase enzyme II%2C A component [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=M479_732 M479_733 M479_733 M479_733 807826 808860 + putative transcriptional regulator [K] COG1609 Transcriptional regulators gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=M479_733 M479_734 M479_734 pta pta 809126 811279 - phosphate acetyltransferase pta: phosphate acetyltransferase~[C] COG0280 Phosphotransacetylase gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=M479_734 M479_735 M479_735 ackA ackA 811447 812649 - acetate kinase ackA: acetate kinase~[C] COG0282 Acetate kinase gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=M479_735 M479_736 M479_736 M479_736 813071 813526 + hypothetical protein conserved hypothetical protein~[S] COG3092 Uncharacterized protein conserved in bacteria gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=M479_736 M479_737 M479_737 M479_737 813824 814318 + hypothetical protein conserved hypothetical protein~[S] COG3013 Uncharacterized conserved protein gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=M479_737 M479_738 M479_738 M479_738 814483 815139 + HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=M479_738 M479_739 M479_739 M479_739 815431 817263 + trkA-C domain protein [P] COG0471 Di- and tricarboxylate transporters gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=M479_739 M479_74 M479_74 M479_74 81118 81885 - PGAP1-like family protein [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=M479_74 M479_740 M479_740 M479_740 817606 818199 - HD domain protein [R] COG1896 Predicted hydrolases of HD superfamily gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=M479_740 M479_741 M479_741 M479_741 818350 819564 - aminotransferase class I and II family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=M479_741 M479_742 M479_742 lrhA lrhA 820419 821351 + transcriptional regulator LrhA [K] COG0583 Transcriptional regulator gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=M479_742 M479_743 M479_743 M479_743 822030 822530 + NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 family protein [C] COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=M479_743 M479_744 M479_744 nuoB nuoB 822632 823309 + NADH-quinone oxidoreductase subunit B [C] COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=M479_744 M479_745 M479_745 nuoD nuoD 823450 825246 + NADH dehydrogenase (quinone)%2C D subunit nuoD: NADH dehydrogenase (quinone)%2C D subunit~[C] COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=M479_745 M479_746 M479_746 nuoE nuoE 825249 825812 + NADH-quinone oxidoreductase subunit E [C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=M479_746 M479_747 M479_747 nuoF nuoF 825809 827194 + NADH oxidoreductase (quinone)%2C F subunit nuoF_fam: NADH oxidoreductase (quinone)%2C F subunit~[C] COG1894 NADH:ubiquinone oxidoreductase%2C NADH-binding (51 kD) subunit gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=M479_747 M479_748 M479_748 nuoG nuoG 827281 830025 + NADH dehydrogenase (quinone)%2C G subunit nuoG: NADH dehydrogenase (quinone)%2C G subunit~[C] COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=M479_748 M479_749 M479_749 nuoH nuoH 830022 830999 + NADH-quinone oxidoreductase subunit H [C] COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=M479_749 M479_75 M479_75 M479_75 82596 82847 + putative exported protein gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=M479_75 M479_750 M479_750 M479_750 831014 831556 + NADH-quinone oxidoreductase%2C chain I family protein nuoI: NADH-quinone oxidoreductase%2C chain I family protein~[C] COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=M479_750 M479_751 M479_751 nuoJ nuoJ 831569 832114 + NADH-quinone oxidoreductase subunit J [C] COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=M479_751 M479_752 M479_752 nuoK nuoK 832111 832413 + NADH-quinone oxidoreductase subunit K [C] COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=M479_752 M479_753 M479_753 M479_753 832410 834254 + proton-translocating NADH-quinone oxidoreductase%2C chain L family protein NDH_I_L: proton-translocating NADH-quinone oxidoreductase%2C chain L family protein~[CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter%2C MnhA subunit gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=M479_753 M479_754 M479_754 nuoM nuoM 834294 835826 + NADH-quinone oxidoreductase subunit M [C] COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=M479_754 M479_755 M479_755 M479_755 835833 837296 + proton-translocating NADH-quinone oxidoreductase%2C chain N family protein NDH_I_N: proton-translocating NADH-quinone oxidoreductase%2C chain N family protein~[C] COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=M479_755 M479_756 M479_756 M479_756 837532 838722 + hypothetical protein conserved hypothetical protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=M479_756 M479_757 M479_757 M479_757 839046 839513 - yhcH/YjgK/YiaL family protein [G] COG2731 Beta-galactosidase%2C beta subunit gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=M479_757 M479_758 M479_758 M479_758 839591 840127 - carbohydrate kinase%2C thermoresistant glucokinase family protein therm_gnt_kin: carbohydrate kinase%2C thermoresistant glucokinase family protein~[G] COG3265 Gluconate kinase gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=M479_758 M479_759 M479_759 M479_759 840176 840940 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=M479_759 M479_76 M479_76 M479_76 83278 83541 - transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=M479_76 M479_760 M479_760 M479_760 841699 842982 - glycosyl hydrolase like GH101 family protein [S] COG1649 Uncharacterized protein conserved in bacteria gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=M479_760 M479_761 M479_761 M479_761 843451 844443 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=M479_761 M479_762 M479_762 M479_762 844909 845859 + D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=M479_762 M479_763 M479_763 M479_763 846405 847721 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=M479_763 M479_764 M479_764 M479_764 847751 848266 + hypothetical protein conserved hypothetical protein~[S] COG4702 Uncharacterized conserved protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=M479_764 M479_765 M479_765 edd edd 848276 850144 + phosphogluconate dehydratase edd: phosphogluconate dehydratase~[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=M479_765 M479_766 M479_766 M479_766 850363 850506 - putative membrane protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=M479_766 M479_767 M479_767 M479_767 851070 851378 + hypothetical protein conserved hypothetical protein~[S] COG4575 Uncharacterized conserved protein gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=M479_767 M479_768 M479_768 M479_768 851933 852577 + putative protein RhiA gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=M479_768 M479_769 M479_769 menF menF 853105 854472 + isochorismate hydroxymutase 2 [HQ] COG1169 Isochorismate synthase gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=M479_769 M479_77 M479_77 M479_77 83590 83952 - hypothetical protein conserved hypothetical protein~[L] COG0582 Integrase gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=M479_77 M479_770 M479_770 menD menD 854700 856403 + 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase~[H] COG1165 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=M479_770 M479_771 M479_771 menH menH 856400 857218 + 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase menH_SHCHC: 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=M479_771 M479_772 M479_772 menB menB 857232 858089 + naphthoate synthase menB: naphthoate synthase~[H] COG0447 Dihydroxynaphthoic acid synthase gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=M479_772 M479_773 M479_773 menC menC 858089 859060 + o-succinylbenzoate synthase menC_gamma/gm+: o-succinylbenzoate synthase~[H] COG1441 O-succinylbenzoate synthase gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=M479_773 M479_774 M479_774 menE menE 859048 860463 + O-succinylbenzoate-CoA ligase menE: O-succinylbenzoate-CoA ligase~[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=M479_774 M479_775 M479_775 M479_775 860529 861488 + glycosyl transferase family%2C a/b domain protein [E] COG0547 Anthranilate phosphoribosyltransferase gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=M479_775 M479_776 M479_776 M479_776 861869 862129 - hypothetical protein conserved hypothetical protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=M479_776 M479_777 M479_777 M479_777 862462 863427 + hypothetical protein conserved hypothetical protein~[R] COG3129 Predicted SAM-dependent methyltransferase gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=M479_777 M479_778 M479_778 M479_778 864196 865488 + sensory box protein [T] COG2202 FOG: PAS/PAC domain gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=M479_778 M479_779 M479_779 M479_779 865712 866434 - ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=M479_779 M479_78 M479_78 M479_78 84088 84867 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=M479_78 M479_780 M479_780 M479_780 866431 867087 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=M479_780 M479_781 M479_781 M479_781 867122 867865 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=M479_781 M479_782 M479_782 M479_782 868435 869562 - tetratricopeptide repeat family protein [S] COG1434 Uncharacterized conserved protein gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=M479_782 M479_783 M479_783 dps dps 869882 870385 - DNA protection during starvation protein [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=M479_783 M479_784 M479_784 M479_784 870642 871418 - methyltransferase domain protein [R] COG4106 Trans-aconitate methyltransferase gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=M479_784 M479_785 M479_785 M479_785 871441 871938 - acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=M479_785 M479_786 M479_786 M479_786 871954 872841 - eamA-like transporter family protein [R] COG5006 Predicted permease%2C DMT superfamily gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=M479_786 M479_787 M479_787 ompX ompX 873246 873770 + outer membrane protein X [M] COG3637 Opacity protein and related surface antigens gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=M479_787 M479_788 M479_788 M479_788 874086 875024 + cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG3965 Predicted Co/Zn/Cd cation transporters gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=M479_788 M479_789 M479_789 M479_789 875262 875804 + hypothetical protein conserved hypothetical protein gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=M479_789 M479_79 M479_79 M479_79 84867 85889 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=M479_79 M479_790 M479_790 M479_790 876000 876668 + hypothetical protein conserved hypothetical protein gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=M479_790 M479_791 M479_791 M479_791 877410 878477 + zinc-binding dehydrogenase family protein [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=M479_791 M479_792 M479_792 M479_792 878652 879569 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=M479_792 M479_793 M479_793 M479_793 879609 880445 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=M479_793 M479_794 M479_794 M479_794 880420 881100 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=M479_794 M479_795 M479_795 M479_795 881097 882089 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=M479_795 M479_796 M479_796 M479_796 882222 883226 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=M479_796 M479_797 M479_797 M479_797 883473 884414 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=M479_797 M479_798 M479_798 M479_798 884517 885602 + tartrate dehydrogenase TTC: tartrate dehydrogenase~[CE] COG0473 Isocitrate/isopropylmalate dehydrogenase gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=M479_798 M479_799 M479_799 M479_799 886219 887865 + transporter%2C betaine/carnitine/choline transporter family protein bcct: transporter%2C betaine/carnitine/choline transporter family protein~[M] COG1292 Choline-glycine betaine transporter gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=M479_799 M479_8 M479_8 mmsA mmsA 12492 15392 + methylmalonate-semialdehyde dehydrogenase MMSDH: methylmalonate-semialdehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=M479_8 M479_80 M479_80 intA intA 85903 86079 - prophage CP4-57 integrase domain protein [L] COG0582 Integrase gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=M479_80 M479_800 M479_800 M479_800 887982 889106 + ring hydroxylating alpha subunit family protein [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases%2C large terminal subunit gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=M479_800 M479_801 M479_801 M479_801 889202 890167 + 2Fe-2S iron-sulfur cluster binding domain protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=M479_801 M479_802 M479_802 M479_802 890820 892508 + surface antigen family protein [U] COG2831 Hemolysin activation/secretion protein gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=M479_802 M479_803 M479_803 M479_803 892664 900259 + hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=M479_803 M479_804 M479_804 M479_804 900261 900770 + hypothetical protein conserved hypothetical protein~[S] COG4304 Uncharacterized protein conserved in bacteria gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=M479_804 M479_805 M479_805 M479_805 901015 901266 + hypothetical protein conserved hypothetical protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=M479_805 M479_806 M479_806 M479_806 901930 903963 + pre-toxin domain with VENN motif family protein [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=M479_806 M479_807 M479_807 M479_807 903973 904170 + hypothetical protein conserved hypothetical protein gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=M479_807 M479_808 M479_808 M479_808 904373 904540 + hypothetical protein conserved hypothetical protein gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=M479_808 M479_809 M479_809 M479_809 904682 905086 + hypothetical protein conserved hypothetical protein gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=M479_809 M479_81 M479_81 M479_81 86494 86811 + hypothetical protein conserved hypothetical protein~[S] COG3657 Uncharacterized protein conserved in bacteria gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=M479_81 M479_810 M479_810 M479_810 905246 905638 + hypothetical protein conserved hypothetical protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=M479_810 M479_811 M479_811 M479_811 905911 906252 + putative exported domain protein gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=M479_811 M479_812 M479_812 M479_812 906300 907508 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=M479_812 M479_813 M479_813 M479_813 908029 909108 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=M479_813 M479_814 M479_814 M479_814 909208 910596 - phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III family protein [G] COG1109 Phosphomannomutase gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=M479_814 M479_815 M479_815 M479_815 910613 911653 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=M479_815 M479_816 M479_816 M479_816 911925 913211 + bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=M479_816 M479_817 M479_817 M479_817 913320 914195 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=M479_817 M479_818 M479_818 M479_818 914196 915020 + binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=M479_818 M479_819 M479_819 M479_819 915167 916222 + hypothetical protein conserved hypothetical protein~[G] COG2152 Predicted glycosylase gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=M479_819 M479_82 M479_82 M479_82 86817 87131 + hypothetical protein conserved hypothetical protein~[K] COG3636 Predicted transcriptional regulator gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=M479_82 M479_820 M479_820 M479_820 916249 917187 + hypothetical protein conserved hypothetical protein gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=M479_820 M479_821 M479_821 M479_821 917310 918425 + putative exported protein gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=M479_821 M479_822 M479_822 M479_822 918464 919738 + putative exported protein gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=M479_822 M479_823 M479_823 M479_823 920345 921589 - mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=M479_823 M479_824 M479_824 cas1 cas1 922736 923716 + CRISPR-associated endonuclease Cas1 cas1: CRISPR-associated endonuclease Cas1~[L] COG1518 Uncharacterized protein predicted to be involved in DNA repair gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=M479_824 M479_825 M479_825 cas3f cas3f 923713 927000 + CRISPR-associated helicase Cas3%2C subtype I-F/YPEST cas3_yersinia: CRISPR-associated helicase Cas3%2C subtype I-F/YPEST~[R] COG1203 Predicted helicases gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=M479_825 M479_826 M479_826 csy1 csy1 927409 928755 + CRISPR type I-F/YPEST-associated protein Csy1 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=M479_826 M479_827 M479_827 csy2 csy2 928752 929702 + CRISPR type I-F/YPEST-associated protein Csy2 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=M479_827 M479_828 M479_828 csy3 csy3 929720 930724 + CRISPR type I-F/YPEST-associated protein Csy3 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=M479_828 M479_829 M479_829 cas6f cas6f 930735 931289 + CRISPR-associated endoribonuclease Cas6/Csy4%2C subtype I-F/YPEST cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4%2C subtype I-F/YPEST gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=M479_829 M479_83 M479_83 M479_83 87128 87229 + hypothetical protein gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=M479_83 M479_830 M479_830 M479_830 931367 932386 - aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=M479_830 M479_831 M479_831 fae fae 932397 932900 - formaldehyde-activating enzyme one_C_fae: formaldehyde-activating enzyme~[S] COG1795 Uncharacterized conserved protein gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=M479_831 M479_832 M479_832 M479_832 932947 934305 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=M479_832 M479_833 M479_833 M479_833 934429 934638 + hypothetical protein conserved hypothetical protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=M479_833 M479_834 M479_834 M479_834 934753 935679 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=M479_834 M479_835 M479_835 esaI esaI 936896 937540 - acyl-homoserine-lactone synthase [TQ] COG3916 N-acyl-L-homoserine lactone synthetase gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=M479_835 M479_836 M479_836 M479_836 936166 936903 + bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=M479_836 M479_837 M479_837 M479_837 937971 938648 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=M479_837 M479_838 M479_838 M479_838 939176 939340 + putative membrane protein gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=M479_838 M479_839 M479_839 M479_839 939699 940766 + rhodanese-like domain protein [R] COG1054 Predicted sulfurtransferase gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=M479_839 M479_84 M479_84 M479_84 87480 88568 - AAA domain protein [L] COG3598 RecA-family ATPase gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=M479_84 M479_840 M479_840 M479_840 940915 941973 + hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=M479_840 M479_841 M479_841 M479_841 942545 943159 - bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=M479_841 M479_842 M479_842 solA solA 943426 944541 - N-methyl-L-tryptophan oxidase [E] COG0665 Glycine/D-amino acid oxidases (deaminating) gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=M479_842 M479_843 M479_843 M479_843 946073 946369 - bssS family protein gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=M479_843 M479_844 M479_844 M479_844 944902 946110 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=M479_844 M479_845 M479_845 M479_845 946875 947120 - dinI-like family protein gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=M479_845 M479_846 M479_846 pyrC pyrC 947433 948479 - dihydroorotase%2C homodimeric type pyrC_dimer: dihydroorotase%2C homodimeric type~[F] COG0418 Dihydroorotase gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=M479_846 M479_847 M479_847 M479_847 948714 949001 + antibiotic biosynthesis monooxygenase family protein [S] COG1359 Uncharacterized conserved protein gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=M479_847 M479_848 M479_848 M479_848 949259 952909 - ribonuclease%2C Rne/Rng family domain protein RNaseEG: ribonuclease%2C Rne/Rng family domain protein~[J] COG1530 Ribonucleases G and E gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=M479_848 M479_849 M479_849 M479_849 953484 954446 + pseudouridine synthase%2C RluA family protein rluA_subfam: pseudouridine synthase%2C RluA family protein~[J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=M479_849 M479_85 M479_85 M479_85 88565 89524 - zinc-binding domain of primase-helicase family protein [S] COG4643 Uncharacterized protein conserved in bacteria gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=M479_85 M479_850 M479_850 maf maf 954569 955165 - septum formation protein Maf maf: septum formation protein Maf~[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=M479_850 M479_851 M479_851 M479_851 955307 955831 + hypothetical protein conserved hypothetical protein~[R] COG1399 Predicted metal-binding%2C possibly nucleic acid-binding protein gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=M479_851 M479_852 M479_852 rpmF rpmF 955844 956011 + ribosomal protein L32 rpmF_bact: ribosomal protein L32~[J] COG0333 Ribosomal protein L32 gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=M479_852 M479_853 M479_853 plsX plsX 956075 957079 + fatty acid/phospholipid synthesis protein PlsX plsX: fatty acid/phospholipid synthesis protein PlsX~[I] COG0416 Fatty acid/phospholipid biosynthesis enzyme gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=M479_853 M479_854 M479_854 fabH fabH 957086 958036 + 3-oxoacyl-[acyl-carrier-] synthase III family protein fabH: 3-oxoacyl-[acyl-carrier-] synthase III family protein~[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=M479_854 M479_855 M479_855 fabD fabD 958074 959003 + malonyl CoA-acyl carrier protein transacylase fabD: malonyl CoA-acyl carrier protein transacylase~[I] COG0331 (acyl-carrier-protein) S-malonyltransferase gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=M479_855 M479_856 M479_856 fabG fabG 959017 959751 + 3-oxoacyl-[acyl-carrier-protein] reductase 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=M479_856 M479_857 M479_857 acpP acpP 959905 960141 + acyl carrier protein acyl_carrier: acyl carrier protein~[IQ] COG0236 Acyl carrier protein gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=M479_857 M479_858 M479_858 fabF fabF 960236 961477 + beta-ketoacyl-acyl-carrier-protein synthase II fabF: beta-ketoacyl-acyl-carrier-protein synthase II~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=M479_858 M479_859 M479_859 M479_859 961677 962135 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=M479_859 M479_86 M479_86 M479_86 89517 90059 - ash family protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=M479_86 M479_860 M479_860 pabC pabC 962551 963357 + aminodeoxychorismate lyase pabC_Proteo: aminodeoxychorismate lyase~[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=M479_860 M479_861 M479_861 M479_861 963626 964651 + yceG-like family protein [R] COG1559 Predicted periplasmic solute-binding protein gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=M479_861 M479_862 M479_862 tmk tmk 964641 965279 + dTMP kinase DTMP_kinase: dTMP kinase~[F] COG0125 Thymidylate kinase gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=M479_862 M479_863 M479_863 holB holB 965279 966301 + DNA polymerase III%2C delta' subunit holB: DNA polymerase III%2C delta' subunit~[L] COG0470 ATPase involved in DNA replication gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=M479_863 M479_864 M479_864 M479_864 966316 967125 + hydrolase%2C TatD family protein [L] COG0084 Mg-dependent DNase gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=M479_864 M479_865 M479_865 ptsG ptsG 967431 968864 + PTS system glucose-specific EIICB component [G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=M479_865 M479_866 M479_866 M479_866 969054 969512 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=M479_866 M479_867 M479_867 M479_867 969955 970773 + shikimate dehydrogenase substrate binding domain protein [E] COG0169 Shikimate 5-dehydrogenase gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=M479_867 M479_868 M479_868 M479_868 970947 971300 + HIT domain protein [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=M479_868 M479_869 M479_869 M479_869 971335 971724 + hypothetical protein conserved hypothetical protein~[R] COG5633 Predicted periplasmic lipoprotein gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=M479_869 M479_87 M479_87 M479_87 90059 90259 - prophage CP4-57 regulatory family protein [K] COG3311 Predicted transcriptional regulator gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=M479_87 M479_870 M479_870 M479_870 971765 972340 + hypothetical protein conserved hypothetical protein~[R] COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=M479_870 M479_871 M479_871 thiK thiK 972381 973187 + thiamine kinase ycfN_thiK: thiamine kinase~[M] COG0510 Predicted choline kinase involved in LPS biosynthesis gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=M479_871 M479_872 M479_872 nagZ nagZ 973258 974289 + beta-hexosaminidase [G] COG1472 Beta-glucosidase-related glycosidases gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=M479_872 M479_873 M479_873 M479_873 974417 974959 + hypothetical protein conserved hypothetical protein~[R] COG3150 Predicted esterase gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=M479_873 M479_874 M479_874 M479_874 975334 976638 + pyridine nucleotide-disulfide oxidoreductase family protein [C] COG1252 NADH dehydrogenase%2C FAD-containing subunit gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=M479_874 M479_875 M479_875 M479_875 977347 977745 + hypothetical protein conserved hypothetical protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=M479_875 M479_876 M479_876 M479_876 977753 978166 + hypothetical protein conserved hypothetical protein gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=M479_876 M479_877 M479_877 M479_877 978262 979470 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=M479_877 M479_878 M479_878 M479_878 979800 980339 + glycine zipper 2TM domain protein [S] COG3134 Predicted outer membrane lipoprotein gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=M479_878 M479_879 M479_879 mfd mfd 980578 984024 - transcription-repair coupling factor mfd: transcription-repair coupling factor~[LK] COG1197 Transcription-repair coupling factor (superfamily II helicase) gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=M479_879 M479_88 M479_88 M479_88 90252 91139 - hypothetical protein phage integrase%2C N-terminal SAM-like domain protein~[L] COG0582 Integrase gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=M479_88 M479_880 M479_880 lolC lolC 984294 985496 + lipo-releasing system transmembrane protein lolC [M] COG4591 ABC-type transport system%2C involved in lipoprotein release%2C permease component gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=M479_880 M479_881 M479_881 lolD lolD 985489 986193 + liporeleasing system%2C ATP-binding protein lolD_lipo_ex: liporeleasing system%2C ATP-binding protein~[V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=M479_881 M479_882 M479_882 lolE lolE 986193 987440 + liporeleasing system%2C transmembrane protein LolE lolE_release: liporeleasing system%2C transmembrane protein LolE~[M] COG4591 ABC-type transport system%2C involved in lipoprotein release%2C permease component gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=M479_882 M479_883 M479_883 M479_883 987459 988229 + glucokinase family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=M479_883 M479_884 M479_884 M479_884 988423 989259 + sir2 family protein [K] COG0846 NAD-dependent protein deacetylases%2C SIR2 family gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=M479_884 M479_885 M479_885 pepT pepT 989589 990824 + peptidase T peptidase-T: peptidase T~[E] COG2195 Di- and tripeptidases gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=M479_885 M479_886 M479_886 M479_886 991245 992366 - cupin superfamily protein [S] COG2850 Uncharacterized conserved protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=M479_886 M479_887 M479_887 M479_887 992450 993856 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=M479_887 M479_888 M479_888 phoP phoP 993910 994581 - alkaline phosphatase synthesis transcriptional regulatory protein phoP [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=M479_888 M479_889 M479_889 M479_889 994792 995415 - outer membrane beta-barrel domain protein gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=M479_889 M479_89 M479_89 M479_89 92860 94005 - hypothetical protein conserved hypothetical protein gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=M479_89 M479_890 M479_890 purB purB 995603 996973 - adenylosuccinate lyase purB: adenylosuccinate lyase~[F] COG0015 Adenylosuccinate lyase gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=M479_890 M479_891 M479_891 hflD hflD 997034 997660 - high frequency lysogenization protein hflD [R] COG2915 Uncharacterized protein involved in purine metabolism gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=M479_891 M479_892 M479_892 trmU trmU 997718 998833 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~[J] COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase%2C contains the PP-loop ATPase domain gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=M479_892 M479_893 M479_893 nudJ nudJ 999020 999466 - phosphatase nudJ [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=M479_893 M479_894 M479_894 M479_894 999459 1000085 - pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=M479_894 M479_895 M479_895 icd icd 1000216 1001469 + isocitrate dehydrogenase%2C NADP-dependent prok_nadp_idh: isocitrate dehydrogenase%2C NADP-dependent~[C] COG0538 Isocitrate dehydrogenases gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=M479_895 M479_896 M479_896 M479_896 1001615 1002658 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=M479_896 M479_897 M479_897 M479_897 1002934 1003194 - hypothetical protein conserved hypothetical protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=M479_897 M479_898 M479_898 M479_898 1003314 1004894 - sensory box protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=M479_898 M479_899 M479_899 M479_899 1005814 1006671 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=M479_899 M479_9 M479_9 M479_9 15434 15967 + hypothetical protein thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein~[E] COG3962 Acetolactate synthase gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=M479_9 M479_90 M479_90 M479_90 94056 95144 - hypothetical protein conserved hypothetical protein gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=M479_90 M479_900 M479_900 M479_900 1006807 1007214 + hxlR-like helix-turn-helix family protein [K] COG1733 Predicted transcriptional regulators gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=M479_900 M479_901 M479_901 M479_901 1007442 1007534 - putative membrane protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=M479_901 M479_902 M479_902 appA appA 1007746 1009071 + periplasmic AppA protein gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=M479_902 M479_903 M479_903 M479_903 1009373 1009576 - ydfZ family protein gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=M479_903 M479_904 M479_904 M479_904 1009879 1010778 - 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase family protein gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=M479_904 M479_905 M479_905 M479_905 1010870 1011319 - asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=M479_905 M479_906 M479_906 M479_906 1011810 1012343 - inner membrane YlaC family protein gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=M479_906 M479_907 M479_907 M479_907 1011622 1011870 + hypothetical protein conserved hypothetical protein gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=M479_907 M479_908 M479_908 M479_908 1012626 1013636 - NAD(P)H quinone oxidoreductase%2C PIG3 family protein quinone_pig3: NAD(P)H quinone oxidoreductase%2C PIG3 family protein~[CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=M479_908 M479_909 M479_909 M479_909 1014043 1017225 - glycosyl hydrolases 2 family protein [G] COG3250 Beta-galactosidase/beta-glucuronidase gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=M479_909 M479_91 M479_91 M479_91 95223 96422 - phage integrase family protein [L] COG0582 Integrase gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=M479_91 M479_910 M479_910 cspE cspE 1017778 1017978 + RNA chaperone%2C negative regulator of cspA transcription [K] COG1278 Cold shock proteins gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=M479_910 M479_911 M479_911 M479_911 1018193 1018384 + dextransucrase DSRB family protein gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=M479_911 M479_912 M479_912 M479_912 1018567 1019028 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=M479_912 M479_913 M479_913 M479_913 1018982 1020268 - hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=M479_913 M479_914 M479_914 M479_914 1021092 1022300 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=M479_914 M479_915 M479_915 M479_915 1022761 1023459 + mgtC family protein [S] COG1285 Uncharacterized membrane protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=M479_915 M479_916 M479_916 mgtA mgtA 1023860 1026559 + magnesium-translocating P-type ATPase ATPase-IIIB_Mg: magnesium-translocating P-type ATPase~[P] COG0474 Cation transport ATPase gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=M479_916 M479_917 M479_917 M479_917 1027747 1028004 + flagellar transcriptional activator family protein gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=M479_917 M479_918 M479_918 M479_918 1028102 1028683 + flagellar transcriptional activator family protein gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=M479_918 M479_919 M479_919 motA motA 1028888 1029775 + flagellar motor stator protein MotA motA1: flagellar motor stator protein MotA~[N] COG1291 Flagellar motor component gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=M479_919 M479_92 M479_92 M479_92 96646 97104 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=M479_92 M479_920 M479_920 M479_920 1029772 1031073 + membrane MotB of proton-channel complex MotA/MotB family protein [N] COG1360 Flagellar motor protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=M479_920 M479_921 M479_921 M479_921 1031084 1033255 + signal transducing histidine kinase%2C homodimeric domain protein [NT] COG0643 Chemotaxis protein histidine kinase and related kinases gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=M479_921 M479_922 M479_922 M479_922 1033418 1033915 + cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=M479_922 M479_923 M479_923 yihN yihN 1034207 1035442 - inner membrane protein yihN [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=M479_923 M479_924 M479_924 M479_924 1035455 1035832 - rutC family protein rutC family protein PH0854~[J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=M479_924 M479_925 M479_925 M479_925 1035829 1036815 - xylose isomerase-like TIM barrel family protein gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=M479_925 M479_926 M479_926 M479_926 1037005 1037670 + HTH domain protein [S] COG2964 Uncharacterized protein conserved in bacteria gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=M479_926 M479_927 M479_927 M479_927 1038145 1041951 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=M479_927 M479_928 M479_928 M479_928 1042479 1045355 + hypothetical protein conserved hypothetical protein~[S] COG5373 Predicted membrane protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=M479_928 M479_929 M479_929 M479_929 1045454 1046125 + putative lipoprotein gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=M479_929 M479_93 M479_93 smpB smpB 97739 98221 - SsrA-binding protein smpB: SsrA-binding protein~[O] COG0691 tmRNA-binding protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=M479_93 M479_930 M479_930 M479_930 1046366 1048039 + hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=M479_930 M479_931 M479_931 M479_931 1048223 1049833 + hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=M479_931 M479_932 M479_932 cheR cheR 1050006 1050878 + chemotaxis protein methyltransferase [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=M479_932 M479_933 M479_933 M479_933 1050878 1051867 + cheB methylesterase family protein [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=M479_933 M479_934 M479_934 cheY cheY 1052027 1052416 + chemotaxis protein CheY [T] COG0784 FOG: CheY-like receiver gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=M479_934 M479_935 M479_935 M479_935 1052426 1053070 + chemotaxis phosphatase%2C CheZ family protein [NT] COG3143 Chemotaxis protein gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=M479_935 M479_936 M479_936 M479_936 1053641 1054405 + N-acetylmuramoyl-L-alanine amidase family protein [V] COG3023 Negative regulator of beta-lactamase expression gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=M479_936 M479_937 M479_937 M479_937 1054762 1056972 + coiled stalk of trimeric autotransporter adhesin family protein [UW] COG5295 Autotransporter adhesin gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=M479_937 M479_938 M479_938 M479_938 1056959 1057393 + hypothetical protein yadA-like C-terminal region family protein~[UW] COG5295 Autotransporter adhesin gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=M479_938 M479_939 M479_939 M479_939 1057493 1058446 + putative exported protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=M479_939 M479_94 M479_94 M479_94 98382 98816 + putative toxin YfjG [I] COG2867 Oligoketide cyclase/lipid transport protein gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=M479_94 M479_940 M479_940 M479_940 1058746 1058919 + putative membrane protein gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=M479_940 M479_941 M479_941 alr alr 1059065 1060294 - alanine racemase alr: alanine racemase~[M] COG0787 Alanine racemase gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=M479_941 M479_942 M479_942 M479_942 1060696 1060890 - hypothetical protein conserved hypothetical protein gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=M479_942 M479_943 M479_943 M479_943 1061441 1061689 + hypothetical protein conserved hypothetical protein gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=M479_943 M479_944 M479_944 M479_944 1062082 1063338 + patatin-like phospholipase family protein gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=M479_944 M479_945 M479_945 M479_945 1063493 1063726 + hypothetical protein conserved hypothetical protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=M479_945 M479_946 M479_946 M479_946 1064021 1064194 + hypothetical protein conserved hypothetical protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=M479_946 M479_947 M479_947 M479_947 1064297 1065076 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=M479_947 M479_948 M479_948 M479_948 1065076 1066098 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=M479_948 M479_949 M479_949 M479_949 1066505 1066894 + ASCH domain protein [S] COG4405 Uncharacterized protein conserved in bacteria gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=M479_949 M479_95 M479_95 M479_95 98809 99093 + rnfH Ubiquitin family protein [S] COG2914 Uncharacterized protein conserved in bacteria gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=M479_95 M479_950 M479_950 M479_950 1067004 1067243 - hypothetical protein conserved hypothetical protein gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=M479_950 M479_951 M479_951 M479_951 1067451 1068440 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=M479_951 M479_952 M479_952 M479_952 1068646 1071093 - outer membrane usher family protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=M479_952 M479_953 M479_953 M479_953 1071298 1072050 - hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=M479_953 M479_954 M479_954 M479_954 1072081 1072638 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=M479_954 M479_955 M479_955 M479_955 1072659 1073189 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=M479_955 M479_956 M479_956 M479_956 1073195 1073749 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=M479_956 M479_957 M479_957 M479_957 1074229 1076880 - mce related family protein [R] COG3008 Paraquat-inducible protein B gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=M479_957 M479_958 M479_958 M479_958 1076849 1078096 - integral membrane%2C PqiA family protein pqiA_fam: integral membrane%2C PqiA family protein~[S] COG2995 Uncharacterized paraquat-inducible protein A gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=M479_958 M479_959 M479_959 M479_959 1078328 1078825 + GAF domain protein [T] COG1956 GAF domain-containing protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=M479_959 M479_96 M479_96 smpA smpA 99243 99584 - small protein A [J] COG2913 Small protein A (tmRNA-binding) gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=M479_96 M479_960 M479_960 proQ proQ 1078921 1079634 + proP effector [T] COG3109 Activator of osmoprotectant transporter ProP gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=M479_960 M479_961 M479_961 prc prc 1079654 1081726 + tail-specific protease [M] COG0793 Periplasmic protease gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=M479_961 M479_962 M479_962 M479_962 1082998 1083186 - hypothetical protein conserved hypothetical protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=M479_962 M479_963 M479_963 M479_963 1082181 1083062 + peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=M479_963 M479_964 M479_964 M479_964 1083720 1084262 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=M479_964 M479_965 M479_965 M479_965 1084415 1085194 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=M479_965 M479_966 M479_966 M479_966 1085276 1087888 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=M479_966 M479_967 M479_967 M479_967 1087885 1089048 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=M479_967 M479_968 M479_968 M479_968 1089045 1089848 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=M479_968 M479_969 M479_969 M479_969 1089902 1091269 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=M479_969 M479_97 M479_97 recN recN 99698 101359 - DNA repair protein RecN recN: DNA repair protein RecN~[L] COG0497 ATPase involved in DNA repair gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=M479_97 M479_970 M479_970 ogl ogl 1091596 1092762 + oligogalacturonate lyase [U] COG0823 Periplasmic component of the Tol biopolymer transport system gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=M479_970 M479_971 M479_971 kdgR kdgR 1092949 1093740 + pectin degradation repressor protein kdgR [K] COG1414 Transcriptional regulator gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=M479_971 M479_972 M479_972 M479_972 1094125 1094976 + N-acetylmuramoyl-L-alanine amidase family protein [V] COG3023 Negative regulator of beta-lactamase expression gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=M479_972 M479_973 M479_973 M479_973 1095191 1096582 - dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[R] COG1823 Predicted Na+/dicarboxylate symporter gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=M479_973 M479_974 M479_974 M479_974 1096786 1097334 - hypothetical protein conserved hypothetical protein~[R] COG1988 Predicted membrane-bound metal-dependent hydrolases gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=M479_974 M479_975 M479_975 kdgM kdgM 1097868 1098578 - oligogalacturonate-specific porin kdgM gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=M479_975 M479_976 M479_976 M479_976 1098876 1100168 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=M479_976 M479_977 M479_977 M479_977 1100184 1101311 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=M479_977 M479_978 M479_978 M479_978 1101325 1102245 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=M479_978 M479_979 M479_979 M479_979 1102238 1103128 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=M479_979 M479_98 M479_98 M479_98 101446 102213 - ATP-NAD kinase family protein [G] COG0061 Predicted sugar kinase gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=M479_98 M479_980 M479_980 M479_980 1103169 1104836 - periplasmic pectate lyase family protein gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=M479_980 M479_981 M479_981 kduD kduD 1105172 1105933 - 2-deoxy-D-gluconate 3-dehydrogenase kduD: 2-deoxy-D-gluconate 3-dehydrogenase~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=M479_981 M479_982 M479_982 M479_982 1106025 1106861 - kduI/IolB family protein [G] COG3717 5-keto 4-deoxyuronate isomerase gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=M479_982 M479_983 M479_983 M479_983 1107197 1107547 + cupin domain protein [S] COG1917 Uncharacterized conserved protein%2C contains double-stranded beta-helix domain gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=M479_983 M479_984 M479_984 M479_984 1107595 1108803 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=M479_984 M479_985 M479_985 yniC yniC 1109038 1109703 - phosphatase YniC [R] COG0637 Predicted phosphatase/phosphohexomutase gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=M479_985 M479_986 M479_986 M479_986 1110114 1110668 + yniB-like family protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=M479_986 M479_987 M479_987 M479_987 1110797 1111672 - fructosamine kinase family protein [G] COG3001 Fructosamine-3-kinase gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=M479_987 M479_988 M479_988 M479_988 1111977 1112870 - ABC 3 transport family protein [P] COG1108 ABC-type Mn2+/Zn2+ transport systems%2C permease components gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=M479_988 M479_989 M479_989 M479_989 1112867 1113751 - ABC 3 transport family protein [P] COG1108 ABC-type Mn2+/Zn2+ transport systems%2C permease components gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=M479_989 M479_99 M479_99 M479_99 102451 103029 + grpE family protein [O] COG0576 Molecular chaperone GrpE (heat shock protein) gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=M479_99 M479_990 M479_990 M479_990 1113751 1114641 - ABC transporter family protein [P] COG1121 ABC-type Mn/Zn transport systems%2C ATPase component gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=M479_990 M479_991 M479_991 M479_991 1114638 1115606 - periplasmic solute binding family protein [P] COG0803 ABC-type metal ion transport system%2C periplasmic component/surface adhesin gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=M479_991 M479_992 M479_992 M479_992 1115818 1116480 + transglycosylase SLT domain protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=M479_992 M479_993 M479_993 M479_993 1116602 1117285 - marC integral membrane family protein [U] COG2095 Multiple antibiotic transporter gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=M479_993 M479_994 M479_994 M479_994 1117604 1117855 + hypothetical protein conserved hypothetical protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=M479_994 M479_995 M479_995 M479_995 1118614 1118826 - KTSC domain protein gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=M479_995 M479_996 M479_996 thrS thrS 1119217 1121145 + threonine--tRNA ligase thrS: threonine--tRNA ligase~[J] COG0441 Threonyl-tRNA synthetase gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=M479_996 M479_997 M479_997 infC infC 1121350 1121700 + translation initiation factor IF-3 infC: translation initiation factor IF-3~[J] COG0290 Translation initiation factor 3 (IF-3) gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=M479_997 M479_998 M479_998 rpmI rpmI 1121797 1121994 + ribosomal protein L35 rpmI_bact: ribosomal protein L35~[J] COG0291 Ribosomal protein L35 gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=M479_998 M479_999 M479_999 rplT rplT 1122032 1122388 + ribosomal protein L20 rplT_bact: ribosomal protein L20~[J] COG0292 Ribosomal protein L20 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=M479_999