M480_1 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M480_1 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M480_1 PF12769 Domain of unknown function (DUF3814) M480_100 PF00005 ABC transporter M480_1002 PF13174 Tetratricopeptide repeat M480_1002 PF13432 Tetratricopeptide repeat M480_1002 PF16331 M480_1002 M480_1003 PF00691 OmpA family M480_1004 PF04052 TolB amino-terminal domain M480_1004 PF07676 WD40-like Beta Propeller Repeat M480_1005 PF06519 TolA C-terminal M480_1006 PF02472 Biopolymer transport protein ExbD/TolR M480_1007 PF01618 M480_1007 M480_1008 PF03061 Thioesterase superfamily M480_1009 PF09600 M480_1009 M480_101 PF01458 Uncharacterized protein family (UPF0051) M480_1010 PF08173 M480_1010 M480_1011 PF02322 M480_1011 M480_1012 PF01654 M480_1012 M480_1013 PF01797 Transposase IS200 like M480_1014 PF00549 CoA-ligase M480_1014 PF02629 CoA binding domain M480_1015 PF00549 CoA-ligase M480_1015 PF08442 ATP-grasp domain M480_1016 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M480_1016 PF00364 Biotin-requiring enzyme M480_1016 PF02817 e3 binding domain M480_1017 PF00676 Dehydrogenase E1 component M480_1017 PF02779 Transketolase, pyrimidine binding domain M480_1017 PF16078 M480_1017 M480_1017 PF16870 M480_1017 M480_1018 PF13085 2Fe-2S iron-sulfur cluster binding domain M480_1018 PF13534 4Fe-4S dicluster domain M480_1019 PF00890 FAD binding domain M480_1019 PF02910 Fumarate reductase flavoprotein C-term M480_102 PF01521 Iron-sulphur cluster biosynthesis M480_1021 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M480_1022 PF00285 Citrate synthase M480_1023 PF01025 GrpE M480_1024 PF01513 ATP-NAD kinase M480_1025 PF02463 RecF/RecN/SMC N terminal domain M480_1026 PF04355 SmpA / OmlA family M480_1027 PF03658 RnfH family Ubiquitin M480_1028 PF03364 Polyketide cyclase / dehydrase and lipid transport M480_1029 PF01668 SmpB protein M480_103 PF03061 Thioesterase superfamily M480_1030 PF01797 Transposase IS200 like M480_1031 PF00589 Phage integrase family M480_1031 PF13356 Domain of unknown function (DUF4102) M480_1032 PF14130 M480_1032 M480_1034 PF12834 M480_1034 M480_1034 PF12835 Integrase M480_1035 PF05930 Prophage CP4-57 regulatory protein (AlpA) M480_1036 PF10554 M480_1036 M480_1037 PF08273 Zinc-binding domain of primase-helicase M480_1037 PF13362 Toprim domain M480_1038 PF13481 AAA domain M480_104 PF01565 FAD binding domain M480_104 PF02913 FAD linked oxidases, C-terminal domain M480_104 PF13183 4Fe-4S dicluster domain M480_1041 PF05973 M480_1041 M480_1043 PF00665 Integrase core domain M480_1043 PF02796 Helix-turn-helix domain of resolvase M480_1044 PF01695 IstB-like ATP binding protein M480_1045 PF13356 Domain of unknown function (DUF4102) M480_1046 PF01527 Transposase M480_1048 PF12697 Alpha/beta hydrolase family M480_105 PF01594 M480_105 M480_1050 PF01402 Ribbon-helix-helix protein, copG family M480_1051 PF00258 Flavodoxin M480_1052 PF01475 Ferric uptake regulator family M480_1053 PF00728 Glycosyl hydrolase family 20, catalytic domain M480_1053 PF02838 Glycosyl hydrolase family 20, domain 2 M480_1053 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M480_1054 PF03173 Putative carbohydrate binding domain M480_1055 PF03573 outer membrane porin, OprD family M480_1056 PF00749 tRNA synthetases class I (E and Q), catalytic domain M480_1056 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M480_1057 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M480_1057 PF00367 phosphotransferase system, EIIB M480_1057 PF02378 Phosphotransferase system, EIIC M480_1058 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M480_1059 PF01979 Amidohydrolase family M480_106 PF00391 PEP-utilising enzyme, mobile domain M480_106 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M480_106 PF02896 PEP-utilising enzyme, TIM barrel domain M480_1060 PF00480 ROK family M480_1060 PF01047 MarR family M480_1061 PF13242 HAD-hyrolase-like M480_1061 PF13344 Haloacid dehalogenase-like hydrolase M480_1062 PF00733 Asparagine synthase M480_1062 PF13537 Glutamine amidotransferase domain M480_1069 PF01494 FAD binding domain M480_107 PF03618 M480_107 M480_1070 PF00919 Uncharacterized protein family UPF0004 M480_1070 PF01938 TRAM domain M480_1070 PF04055 Radical SAM superfamily M480_1071 PF02562 PhoH-like protein M480_1072 PF02130 Uncharacterized protein family UPF0054 M480_1073 PF00571 CBS domain M480_1073 PF03471 Transporter associated domain M480_1074 PF00795 Carbon-nitrogen hydrolase M480_1075 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_1076 PF00528 Binding-protein-dependent transport system inner membrane component M480_1077 PF00528 Binding-protein-dependent transport system inner membrane component M480_1078 PF00005 ABC transporter M480_1079 PF07295 M480_1079 M480_108 PF00793 DAHP synthetase I family M480_1080 PF00133 tRNA synthetases class I (I, L, M and V) M480_1080 PF08264 Anticodon-binding domain of tRNA M480_1080 PF13603 Leucyl-tRNA synthetase, Domain 2 M480_1081 PF04390 Lipopolysaccharide-assembly M480_1082 PF06144 DNA polymerase III, delta subunit M480_1082 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M480_1083 PF01467 Cytidylyltransferase M480_1084 PF02410 Oligomerisation domain M480_1085 PF02590 Predicted SPOUT methyltransferase M480_1086 PF00905 Penicillin binding protein transpeptidase domain M480_1086 PF03717 Penicillin-binding Protein dimerisation domain M480_1087 PF01098 M480_1087 M480_1088 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel M480_1088 PF05036 Sporulation related domain M480_1089 PF00768 D-alanyl-D-alanine carboxypeptidase M480_1089 PF07943 Penicillin-binding protein 5, C-terminal domain M480_109 PF02696 M480_109 M480_1090 PF04359 Protein of unknown function (DUF493) M480_1091 PF03099 Biotin/lipoate A/B protein ligase family M480_1092 PF04055 Radical SAM superfamily M480_1092 PF16881 M480_1092 M480_1093 PF02416 mttA/Hcf106 family M480_1094 PF02537 M480_1094 M480_1095 PF00313 'Cold-shock' DNA-binding domain M480_1096 PF00313 'Cold-shock' DNA-binding domain M480_1097 PF00196 Bacterial regulatory proteins, luxR family M480_11 PF04264 YceI-like domain M480_110 PF03099 Biotin/lipoate A/B protein ligase family M480_110 PF10437 Bacterial lipoate protein ligase C-terminus M480_1100 PF08971 Glycogen synthesis protein M480_1101 PF03992 Antibiotic biosynthesis monooxygenase M480_1102 PF00005 ABC transporter M480_1102 PF00664 ABC transporter transmembrane region M480_1104 PF04962 KduI/IolB family M480_1105 PF01261 Xylose isomerase-like TIM barrel M480_1106 PF00294 pfkB family carbohydrate kinase M480_1106 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) M480_1107 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_1107 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M480_1108 PF02653 M480_1108 M480_1109 PF00005 ABC transporter M480_111 PF00877 NlpC/P60 family M480_1110 PF13407 Periplasmic binding protein domain M480_1111 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M480_1112 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_1113 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M480_1114 PF00171 Aldehyde dehydrogenase family M480_1114 PF00205 Thiamine pyrophosphate enzyme, central domain M480_1114 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M480_1116 PF01380 SIS domain M480_1116 PF01418 Helix-turn-helix domain, rpiR family M480_1117 PF07274 M480_1117 M480_1119 PF00207 Alpha-2-macroglobulin family M480_1119 PF01835 MG2 domain M480_1119 PF07703 Alpha-2-macroglobulin family N-terminal region M480_1119 PF11974 Alpha-2-macroglobulin MG1 domain M480_1120 PF00905 Penicillin binding protein transpeptidase domain M480_1120 PF00912 Transglycosylase M480_1120 PF06832 M480_1120 M480_1121 PF13693 Winged helix-turn-helix DNA-binding M480_1123 PF06836 M480_1123 M480_1124 PF06836 M480_1124 M480_1125 PF05638 Protein of unknown function (DUF796) M480_1128 PF03212 Pertactin M480_1128 PF03797 Autotransporter beta-domain M480_1129 PF11459 M480_1129 M480_1129 PF17194 M480_1129 M480_113 PF00892 EamA-like transporter family M480_1131 PF00872 M480_1131 M480_1132 PF09925 M480_1132 M480_1132 PF14351 M480_1132 M480_1133 PF14345 M480_1133 M480_1134 PF00933 Glycosyl hydrolase family 3 N terminal domain M480_1134 PF01915 Glycosyl hydrolase family 3 C-terminal domain M480_1134 PF14310 Fibronectin type III-like domain M480_1136 PF00248 Aldo/keto reductase family M480_1137 PF00248 Aldo/keto reductase family M480_1138 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_1138 PF03466 LysR substrate binding domain M480_1139 PF00665 Integrase core domain M480_1139 PF02796 Helix-turn-helix domain of resolvase M480_114 PF02366 M480_114 M480_1140 PF01695 IstB-like ATP binding protein M480_1141 PF01695 IstB-like ATP binding protein M480_1144 PF00782 Dual specificity phosphatase, catalytic domain M480_1144 PF14378 M480_1144 M480_1145 PF12146 Putative lysophospholipase M480_1145 PF12147 M480_1145 M480_1146 PF01553 Acyltransferase M480_1147 PF01148 Cytidylyltransferase family M480_1148 PF01066 CDP-alcohol phosphatidyltransferase M480_115 PF01522 Polysaccharide deacetylase M480_1154 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M480_1154 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M480_1155 PF13275 S4 domain M480_1156 PF01797 Transposase IS200 like M480_1158 PF01406 tRNA synthetases class I (C) catalytic domain M480_1158 PF09190 DALR domain M480_1159 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M480_116 PF00551 Formyl transferase M480_116 PF01370 NAD dependent epimerase/dehydratase family M480_116 PF02911 Formyl transferase, C-terminal domain M480_1160 PF00149 Calcineurin-like phosphoesterase M480_1161 PF00731 AIR carboxylase M480_1162 PF02222 ATP-grasp domain M480_1163 PF02687 M480_1163 M480_1164 PF00005 ABC transporter M480_1165 PF13472 GDSL-like Lipase/Acylhydrolase family M480_1166 PF00106 short chain dehydrogenase M480_1167 PF00085 Thioredoxin M480_1167 PF14559 Tetratricopeptide repeat M480_1167 PF14561 Tetratricopeptide repeat M480_1168 PF01145 SPFH domain / Band 7 family M480_1169 PF01957 NfeD-like C-terminal, partner-binding M480_117 PF00535 Glycosyl transferase family 2 M480_1170 PF13411 MerR HTH family regulatory protein M480_1171 PF00122 E1-E2 ATPase M480_1171 PF00403 Heavy-metal-associated domain M480_1171 PF00702 haloacid dehalogenase-like hydrolase M480_1172 PF01963 M480_1172 M480_1173 PF04073 Aminoacyl-tRNA editing domain M480_1176 PF02872 5'-nucleotidase, C-terminal domain M480_1177 PF00149 Calcineurin-like phosphoesterase M480_1179 PF07690 Major Facilitator Superfamily M480_118 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M480_1180 PF07690 Major Facilitator Superfamily M480_1181 PF00999 Sodium/hydrogen exchanger family M480_1181 PF02254 TrkA-N domain M480_1182 PF00294 pfkB family carbohydrate kinase M480_1183 PF02706 Chain length determinant protein M480_1184 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M480_1184 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M480_1184 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M480_1184 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M480_1185 PF00535 Glycosyl transferase family 2 M480_1186 PF00483 Nucleotidyl transferase M480_1186 PF01050 Mannose-6-phosphate isomerase M480_1187 PF01370 NAD dependent epimerase/dehydratase family M480_1188 PF16363 M480_1188 M480_1189 PF16363 M480_1189 M480_119 PF00005 ABC transporter M480_1190 PF00534 Glycosyl transferases group 1 M480_1190 PF13439 Glycosyltransferase Family 4 M480_1192 PF13692 Glycosyl transferases group 1 M480_1194 PF00535 Glycosyl transferase family 2 M480_1196 PF13450 NAD(P)-binding Rossmann-like domain M480_1197 PF01370 NAD dependent epimerase/dehydratase family M480_1198 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M480_1199 PF16363 M480_1199 M480_12 PF01292 Prokaryotic cytochrome b561 M480_120 PF00255 Glutathione peroxidase M480_1200 PF00483 Nucleotidyl transferase M480_1201 PF00111 2Fe-2S iron-sulfur cluster binding domain M480_1201 PF00175 Oxidoreductase NAD-binding domain M480_1201 PF00970 Oxidoreductase FAD-binding domain M480_1202 PF00762 Ferrochelatase M480_1203 PF00406 Adenylate kinase M480_1203 PF05191 Adenylate kinase, active site lid M480_1204 PF00183 Hsp90 protein M480_1204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_1205 PF02132 RecR protein M480_1205 PF13662 Toprim domain M480_1206 PF02575 YbaB/EbfC DNA-binding family M480_1207 PF12168 M480_1207 M480_1207 PF12169 DNA polymerase III subunits gamma and tau domain III M480_1207 PF12170 DNA polymerase III tau subunit V interacting with alpha M480_1207 PF13177 DNA polymerase III, delta subunit M480_1208 PF00156 Phosphoribosyl transferase domain M480_1209 PF04304 M480_1209 M480_121 PF01032 FecCD transport family M480_1210 PF07445 Primosomal replication protein priB and priC M480_1211 PF00924 Mechanosensitive ion channel M480_1211 PF12794 M480_1211 M480_1211 PF12795 M480_1211 M480_1212 PF02635 DsrE/DsrF-like family M480_1213 PF00440 Bacterial regulatory proteins, tetR family M480_1213 PF08361 MAATS-type transcriptional repressor, C-terminal region M480_1214 PF00529 HlyD family secretion protein M480_1214 PF16576 M480_1214 M480_1215 PF00873 AcrB/AcrD/AcrF family M480_1216 PF01197 Ribosomal protein L31 M480_1217 PF00444 Ribosomal protein L36 M480_1219 PF10757 M480_1219 M480_122 PF10697 M480_122 M480_1220 PF05321 Haemolysin expression modulating protein M480_1221 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M480_1222 PF09619 Type III secretion system lipoprotein chaperone (YscW) M480_1223 PF13622 Thioesterase-like superfamily M480_1224 PF00909 Ammonium Transporter Family M480_1225 PF00543 Nitrogen regulatory protein P-II M480_1226 PF00005 ABC transporter M480_1226 PF00664 ABC transporter transmembrane region M480_1227 PF00005 ABC transporter M480_1227 PF00664 ABC transporter transmembrane region M480_1228 PF01037 AsnC family M480_1228 PF13412 Winged helix-turn-helix DNA-binding M480_1229 PF00291 Pyridoxal-phosphate dependent enzyme M480_123 PF00216 Bacterial DNA-binding protein M480_1230 PF08282 haloacid dehalogenase-like hydrolase M480_1231 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_1231 PF12793 M480_1231 M480_1232 PF06508 Queuosine biosynthesis protein QueC M480_1233 PF13279 Thioesterase-like superfamily M480_1234 PF12836 Helix-hairpin-helix motif M480_1235 PF13145 PPIC-type PPIASE domain M480_1235 PF13624 SurA N-terminal domain M480_1236 PF01797 Transposase IS200 like M480_1238 PF00216 Bacterial DNA-binding protein M480_1239 PF00004 ATPase family associated with various cellular activities (AAA) M480_1239 PF02190 ATP-dependent protease La (LON) domain M480_1239 PF05362 Lon protease (S16) C-terminal proteolytic domain M480_124 PF01588 Putative tRNA binding domain M480_124 PF03147 Ferredoxin-fold anticodon binding domain M480_124 PF03483 B3/4 domain M480_124 PF03484 tRNA synthetase B5 domain M480_1240 PF06689 ClpX C4-type zinc finger M480_1240 PF07724 AAA domain (Cdc48 subfamily) M480_1240 PF10431 C-terminal, D2-small domain, of ClpB protein M480_1241 PF00574 Clp protease M480_1242 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M480_1242 PF05697 Bacterial trigger factor protein (TF) M480_1242 PF05698 Bacterial trigger factor protein (TF) C-terminus M480_1244 PF01722 BolA-like protein M480_1245 PF03923 M480_1245 M480_1245 PF08139 M480_1245 M480_1246 PF07690 Major Facilitator Superfamily M480_1247 PF03502 Nucleoside-specific channel-forming protein, Tsx M480_1248 PF06481 COX Aromatic Rich Motif M480_1249 PF00115 Cytochrome C and Quinol oxidase polypeptide I M480_125 PF01409 tRNA synthetases class II core domain (F) M480_125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M480_1250 PF00510 Cytochrome c oxidase subunit III M480_1251 PF03626 M480_1251 M480_1252 PF01040 UbiA prenyltransferase family M480_1253 PF07690 Major Facilitator Superfamily M480_1254 PF04461 Protein of unknown function (DUF520) M480_1255 PF02558 Ketopantoate reductase PanE/ApbA M480_1255 PF08546 Ketopantoate reductase PanE/ApbA C terminal M480_1256 PF01965 DJ-1/PfpI family M480_1257 PF02568 Thiamine biosynthesis protein (ThiI) M480_1257 PF02926 THUMP domain M480_1258 PF02609 Exonuclease VII small subunit M480_1259 PF00348 Polyprenyl synthetase M480_126 PF00453 Ribosomal protein L20 M480_1260 PF02779 Transketolase, pyrimidine binding domain M480_1260 PF02780 Transketolase, C-terminal domain M480_1260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M480_1261 PF01797 Transposase IS200 like M480_1262 PF04608 Phosphatidylglycerophosphatase A M480_1263 PF00586 AIR synthase related protein, N-terminal domain M480_1263 PF02769 AIR synthase related protein, C-terminal domain M480_1264 PF01029 NusB family M480_1265 PF00885 6,7-dimethyl-8-ribityllumazine synthase M480_1266 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M480_1266 PF01872 RibD C-terminal domain M480_1267 PF03477 ATP cone domain M480_127 PF01632 Ribosomal protein L35 M480_1270 PF01797 Transposase IS200 like M480_1271 PF02355 Protein export membrane protein M480_1271 PF07549 SecD/SecF GG Motif M480_1272 PF02355 Protein export membrane protein M480_1272 PF07549 SecD/SecF GG Motif M480_1272 PF13721 SecD export protein N-terminal TM region M480_1273 PF02699 Preprotein translocase subunit M480_1274 PF01702 Queuine tRNA-ribosyltransferase M480_1275 PF02547 Queuosine biosynthesis protein M480_1276 PF04336 M480_1276 M480_1277 PF00578 AhpC/TSA family M480_1277 PF10417 C-terminal domain of 1-Cys peroxiredoxin M480_1278 PF01019 Gamma-glutamyltranspeptidase M480_1279 PF01019 Gamma-glutamyltranspeptidase M480_128 PF00707 Translation initiation factor IF-3, C-terminal domain M480_1280 PF00106 short chain dehydrogenase M480_1281 PF00128 Alpha amylase, catalytic domain M480_1281 PF02903 Alpha amylase, N-terminal ig-like domain M480_1282 PF00324 Amino acid permease M480_1283 PF05525 M480_1283 M480_1284 PF12849 PBP superfamily domain M480_1285 PF00512 His Kinase A (phospho-acceptor) domain M480_1285 PF00989 PAS fold M480_1285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_1285 PF11808 M480_1285 M480_1286 PF00072 Response regulator receiver domain M480_1286 PF00486 Transcriptional regulatory protein, C terminal M480_1287 PF00149 Calcineurin-like phosphoesterase M480_1287 PF12320 Type 5 capsule protein repressor C-terminal domain M480_1288 PF13476 AAA domain M480_1288 PF13558 Putative exonuclease SbcCD, C subunit M480_1289 PF00480 ROK family M480_129 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M480_129 PF02824 TGS domain M480_129 PF03129 Anticodon binding domain M480_129 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M480_1290 PF04381 Putative exonuclease, RdgC M480_1291 PF06865 Protein of unknown function (DUF1255) M480_1292 PF01202 Shikimate kinase M480_1293 PF00398 Ribosomal RNA adenine dimethylase M480_1294 PF08241 Methyltransferase domain M480_1296 PF07238 PilZ domain M480_1296 PF07317 Flagellar regulator YcgR M480_1297 PF00171 Aldehyde dehydrogenase family M480_1298 PF00696 Amino acid kinase family M480_1298 PF01472 PUA domain M480_1299 PF07417 Transcriptional regulator Crl M480_130 PF13619 M480_130 M480_1300 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) M480_1301 PF00156 Phosphoribosyl transferase domain M480_1302 PF16083 M480_1302 M480_1303 PF03067 Chitin binding domain M480_1305 PF01546 Peptidase family M20/M25/M40 M480_1305 PF07687 Peptidase dimerisation domain M480_1306 PF00817 impB/mucB/samB family M480_1306 PF11798 IMS family HHH motif M480_1306 PF11799 impB/mucB/samB family C-terminal domain M480_1307 PF03009 Glycerophosphoryl diester phosphodiesterase family M480_1308 PF04400 M480_1308 M480_1309 PF02424 ApbE family M480_1310 PF00111 2Fe-2S iron-sulfur cluster binding domain M480_1310 PF00175 Oxidoreductase NAD-binding domain M480_1310 PF00970 Oxidoreductase FAD-binding domain M480_1311 PF02508 M480_1311 M480_1312 PF02508 M480_1312 M480_1313 PF04205 FMN-binding domain M480_1314 PF03116 M480_1314 M480_1315 PF05896 M480_1315 M480_1315 PF11973 M480_1315 M480_1316 PF13230 Glutamine amidotransferases class-II M480_1317 PF03734 L,D-transpeptidase catalytic domain M480_1318 PF13580 SIS domain M480_1319 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M480_1319 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M480_1319 PF09317 M480_1319 M480_132 PF01914 M480_132 M480_1320 PF01797 Transposase IS200 like M480_1321 PF03333 Adhesin biosynthesis transcription regulatory protein M480_1323 PF05860 haemagglutination activity domain M480_1323 PF13018 M480_1323 M480_1324 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M480_1324 PF08479 POTRA domain, ShlB-type M480_1325 PF01636 Phosphotransferase enzyme family M480_1326 PF01008 Initiation factor 2 subunit family M480_1327 PF03079 ARD/ARD' family M480_1329 PF00596 Class II Aldolase and Adducin N-terminal domain M480_133 PF01464 Transglycosylase SLT domain M480_1330 PF00155 Aminotransferase class I and II M480_1331 PF00795 Carbon-nitrogen hydrolase M480_1332 PF01546 Peptidase family M20/M25/M40 M480_1334 PF00665 Integrase core domain M480_1334 PF02796 Helix-turn-helix domain of resolvase M480_1335 PF01695 IstB-like ATP binding protein M480_1336 PF00266 Aminotransferase class-V M480_1337 PF00005 ABC transporter M480_1338 PF00528 Binding-protein-dependent transport system inner membrane component M480_1339 PF00528 Binding-protein-dependent transport system inner membrane component M480_134 PF01297 Periplasmic solute binding protein family M480_1340 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_1341 PF01380 SIS domain M480_1341 PF01418 Helix-turn-helix domain, rpiR family M480_1342 PF13318 M480_1342 M480_1343 PF01425 Amidase M480_1344 PF11533 Protein of unknown function (DUF3225) M480_1345 PF07690 Major Facilitator Superfamily M480_1346 PF03591 M480_1346 M480_1347 PF05437 M480_1347 M480_1348 PF01047 MarR family M480_1349 PF00529 HlyD family secretion protein M480_1349 PF16576 M480_1349 M480_135 PF00005 ABC transporter M480_1350 PF07690 Major Facilitator Superfamily M480_1351 PF00588 SpoU rRNA Methylase family M480_1351 PF08032 RNA 2'-O ribose methyltransferase substrate binding M480_1352 PF00085 Thioredoxin M480_1353 PF03942 M480_1353 M480_1354 PF00583 Acetyltransferase (GNAT) family M480_1354 PF13380 CoA binding domain M480_1354 PF13549 ATP-grasp domain M480_1354 PF13607 Succinyl-CoA ligase like flavodoxin domain M480_1355 PF13091 PLD-like domain M480_1356 PF10043 M480_1356 M480_136 PF00950 M480_136 M480_1362 PF01177 Asp/Glu/Hydantoin racemase M480_1363 PF00593 TonB dependent receptor M480_1363 PF07715 TonB-dependent Receptor Plug Domain M480_1364 PF05958 tRNA (Uracil-5-)-methyltransferase M480_1365 PF07226 M480_1365 M480_1366 PF00440 Bacterial regulatory proteins, tetR family M480_1367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_1367 PF03466 LysR substrate binding domain M480_1368 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M480_1368 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_1369 PF00462 Glutaredoxin M480_1369 PF08534 Redoxin M480_137 PF00950 M480_137 M480_1370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M480_1370 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_1371 PF03544 Gram-negative bacterial TonB protein C-terminal M480_1372 PF13437 HlyD family secretion protein M480_1372 PF13533 Biotin-lipoyl like M480_1373 PF00005 ABC transporter M480_1373 PF00664 ABC transporter transmembrane region M480_1374 PF06438 Heme-binding protein A (HasA) M480_1375 PF00593 TonB dependent receptor M480_1375 PF07715 TonB-dependent Receptor Plug Domain M480_1377 PF00206 Lyase M480_1377 PF14698 Argininosuccinate lyase C-terminal M480_1378 PF00696 Amino acid kinase family M480_1379 PF01118 Semialdehyde dehydrogenase, NAD binding domain M480_1379 PF02774 Semialdehyde dehydrogenase, dimerisation domain M480_138 PF03881 Fructosamine kinase M480_1380 PF01546 Peptidase family M20/M25/M40 M480_1380 PF07687 Peptidase dimerisation domain M480_1381 PF00311 Phosphoenolpyruvate carboxylase M480_1382 PF13518 Helix-turn-helix domain M480_1383 PF00665 Integrase core domain M480_1383 PF13276 M480_1383 M480_1384 PF00312 Ribosomal protein S15 M480_1385 PF01509 TruB family pseudouridylate synthase (N terminal domain) M480_1385 PF09157 Pseudouridine synthase II TruB, C-terminal M480_1385 PF16198 M480_1385 M480_1386 PF02033 Ribosome-binding factor A M480_1387 PF00009 Elongation factor Tu GTP binding domain M480_1387 PF03144 Elongation factor Tu domain 2 M480_1387 PF04760 Translation initiation factor IF-2, N-terminal region M480_1387 PF08364 M480_1387 M480_1387 PF11987 Translation-initiation factor 2 M480_1388 PF08529 NusA N-terminal domain M480_1388 PF13184 NusA-like KH domain M480_1388 PF14520 Helix-hairpin-helix domain M480_1389 PF02576 Uncharacterised BCR, YhbC family COG0779 M480_1389 PF17384 M480_1389 M480_139 PF14002 M480_139 M480_1392 PF03840 Preprotein translocase SecG subunit M480_1393 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M480_1393 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M480_1393 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M480_1393 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M480_1394 PF00809 Pterin binding enzyme M480_1395 PF00004 ATPase family associated with various cellular activities (AAA) M480_1395 PF01434 Peptidase family M41 M480_1395 PF06480 FtsH Extracellular M480_1396 PF01728 FtsJ-like methyltransferase M480_1397 PF01985 CRS1 / YhbY (CRM) domain M480_1398 PF01272 Transcription elongation factor, GreA/GreB, C-term M480_1398 PF03449 Transcription elongation factor, N-terminal M480_1399 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M480_14 PF00089 Trypsin M480_140 PF13419 Haloacid dehalogenase-like hydrolase M480_1400 PF00072 Response regulator receiver domain M480_1400 PF00486 Transcriptional regulatory protein, C terminal M480_1401 PF00512 His Kinase A (phospho-acceptor) domain M480_1401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_1402 PF01018 GTP1/OBG M480_1402 PF01926 50S ribosome-binding GTPase M480_1403 PF00892 EamA-like transporter family M480_1404 PF01016 Ribosomal L27 protein M480_1405 PF00829 Ribosomal prokaryotic L21 protein M480_1406 PF00348 Polyprenyl synthetase M480_1407 PF02316 Mu DNA-binding domain M480_1408 PF13693 Winged helix-turn-helix DNA-binding M480_1409 PF00056 lactate/malate dehydrogenase, NAD binding domain M480_1409 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M480_141 PF00872 M480_141 M480_1410 PF01316 Arginine repressor, DNA binding domain M480_1410 PF02863 Arginine repressor, C-terminal domain M480_1411 PF07338 Protein of unknown function (DUF1471) M480_1412 PF01225 Mur ligase family, catalytic domain M480_1412 PF02875 Mur ligase family, glutamate ligase domain M480_1412 PF08245 Mur ligase middle domain M480_1413 PF00316 Fructose-1-6-bisphosphatase M480_1414 PF00719 Inorganic pyrophosphatase M480_1415 PF06094 AIG2-like family M480_1416 PF04357 M480_1416 M480_1417 PF01103 Surface antigen M480_1417 PF07244 Surface antigen variable number repeat M480_1417 PF17243 M480_1417 M480_1418 PF01625 Peptide methionine sulfoxide reductase M480_1419 PF00571 CBS domain M480_1419 PF01595 M480_1419 M480_1419 PF03471 Transporter associated domain M480_142 PF07883 Cupin domain M480_1420 PF06526 Protein of unknown function (DUF1107) M480_1421 PF09695 M480_1421 M480_1422 PF00459 Inositol monophosphatase family M480_1423 PF00149 Calcineurin-like phosphoesterase M480_1423 PF02872 5'-nucleotidase, C-terminal domain M480_1424 PF01814 Hemerythrin HHE cation binding domain M480_1424 PF04405 M480_1424 M480_1425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M480_1425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M480_1426 PF04225 Opacity-associated protein A LysM-like domain M480_1426 PF08525 M480_1426 M480_1427 PF12582 M480_1427 M480_1428 PF01797 Transposase IS200 like M480_1429 PF01281 Ribosomal protein L9, N-terminal domain M480_1429 PF03948 Ribosomal protein L9, C-terminal domain M480_143 PF04962 KduI/IolB family M480_1430 PF01084 Ribosomal protein S18 M480_1431 PF01250 Ribosomal protein S6 M480_1433 PF00326 Prolyl oligopeptidase family M480_1434 PF01695 IstB-like ATP binding protein M480_1435 PF00665 Integrase core domain M480_1435 PF02796 Helix-turn-helix domain of resolvase M480_1436 PF13673 Acetyltransferase (GNAT) domain M480_1437 PF00485 Phosphoribulokinase / Uridine kinase family M480_1438 PF02237 Biotin protein ligase C terminal domain M480_1438 PF03099 Biotin/lipoate A/B protein ligase family M480_1438 PF08279 HTH domain M480_1439 PF01565 FAD binding domain M480_1439 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M480_144 PF13561 Enoyl-(Acyl carrier protein) reductase M480_1445 PF12724 Flavodoxin domain M480_1446 PF02386 Cation transport protein M480_1447 PF01205 Uncharacterized protein family UPF0029 M480_1447 PF09186 Domain of unknown function (DUF1949) M480_1448 PF00557 Metallopeptidase family M24 M480_1449 PF00378 Enoyl-CoA hydratase/isomerase family M480_1449 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M480_1449 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M480_145 PF06917 Periplasmic pectate lyase M480_1450 PF00108 Thiolase, N-terminal domain M480_1450 PF02803 Thiolase, C-terminal domain M480_1451 PF00175 Oxidoreductase NAD-binding domain M480_1451 PF00970 Oxidoreductase FAD-binding domain M480_1452 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M480_1453 PF02357 Transcription termination factor nusG M480_1454 PF00490 Delta-aminolevulinic acid dehydratase M480_1455 PF01026 TatD related DNase M480_1456 PF00902 Sec-independent protein translocase protein (TatC) M480_1458 PF02416 mttA/Hcf106 family M480_1459 PF03109 M480_1459 M480_146 PF00528 Binding-protein-dependent transport system inner membrane component M480_1460 PF02036 SCP-2 sterol transfer family M480_1461 PF01209 ubiE/COQ5 methyltransferase family M480_1462 PF02646 M480_1462 M480_1463 PF09335 M480_1463 M480_1464 PF02554 M480_1464 M480_1464 PF13722 M480_1464 M480_1465 PF13350 Tyrosine phosphatase family M480_1466 PF01048 Phosphorylase superfamily M480_1467 PF01738 Dienelactone hydrolase family M480_1468 PF01717 Cobalamin-independent synthase, Catalytic domain M480_1468 PF08267 Cobalamin-independent synthase, N-terminal domain M480_1469 PF00892 EamA-like transporter family M480_147 PF00528 Binding-protein-dependent transport system inner membrane component M480_1470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_1470 PF03466 LysR substrate binding domain M480_1471 PF03547 M480_1471 M480_1472 PF03009 Glycerophosphoryl diester phosphodiesterase family M480_1473 PF00005 ABC transporter M480_1473 PF08402 TOBE domain M480_1474 PF00528 Binding-protein-dependent transport system inner membrane component M480_1475 PF00528 Binding-protein-dependent transport system inner membrane component M480_1476 PF13416 Bacterial extracellular solute-binding protein M480_1477 PF04449 CS1 type fimbrial major subunit M480_1478 PF16967 M480_1478 M480_148 PF00005 ABC transporter M480_1484 PF00005 ABC transporter M480_1485 PF00005 ABC transporter M480_1485 PF12399 Branched-chain amino acid ATP-binding cassette transporter M480_1486 PF02653 M480_1486 M480_1486 PF11862 M480_1486 M480_1487 PF02653 M480_1487 M480_1488 PF13458 Periplasmic binding protein M480_1489 PF12568 Acetyltransferase (GNAT) domain M480_149 PF01547 Bacterial extracellular solute-binding protein M480_1490 PF01797 Transposase IS200 like M480_1491 PF00140 Sigma-70 factor, region 1 M480_1491 PF04542 Sigma-70 region 2 M480_1491 PF04545 Sigma-70, region 4 M480_1492 PF02687 M480_1492 M480_1493 PF00005 ABC transporter M480_1494 PF00448 SRP54-type protein, GTPase domain M480_1494 PF02881 SRP54-type protein, helical bundle domain M480_1495 PF03602 Conserved hypothetical protein 95 M480_1496 PF06611 M480_1496 M480_1497 PF10694 Protein of unknown function (DUF2500) M480_1498 PF08850 M480_1498 M480_1499 PF07947 M480_1499 M480_15 PF01381 Helix-turn-helix M480_150 PF06178 Oligogalacturonate-specific porin protein (KdgM) M480_1500 PF00122 E1-E2 ATPase M480_1500 PF00403 Heavy-metal-associated domain M480_1500 PF00702 haloacid dehalogenase-like hydrolase M480_1501 PF01206 Sulfurtransferase TusA M480_1502 PF02592 M480_1502 M480_1503 PF08786 Domain of unknown function (DUF1795) M480_1504 PF02754 M480_1504 M480_1505 PF00890 FAD binding domain M480_1506 PF01266 FAD dependent oxidoreductase M480_1506 PF04324 BFD-like [2Fe-2S] binding domain M480_1507 PF03009 Glycerophosphoryl diester phosphodiesterase family M480_1508 PF03272 M480_1508 M480_1509 PF08282 haloacid dehalogenase-like hydrolase M480_151 PF04307 M480_151 M480_1510 PF12146 Putative lysophospholipase M480_1511 PF01810 M480_1511 M480_1512 PF01810 M480_1512 M480_1513 PF00270 DEAD/DEAH box helicase M480_1513 PF00271 Helicase conserved C-terminal domain M480_1513 PF00570 HRDC domain M480_1513 PF09382 RQC domain M480_1513 PF16124 M480_1513 M480_1514 PF02253 Phospholipase A1 M480_1515 PF03061 Thioesterase superfamily M480_1516 PF00892 EamA-like transporter family M480_1517 PF01544 CorA-like Mg2+ transporter protein M480_1518 PF09370 TIM-barrel signal transduction protein M480_1519 PF06792 Uncharacterised protein family (UPF0261) M480_152 PF00375 Sodium:dicarboxylate symporter family M480_1520 PF00440 Bacterial regulatory proteins, tetR family M480_1521 PF00580 UvrD/REP helicase N-terminal domain M480_1521 PF13361 UvrD-like helicase C-terminal domain M480_1522 PF00702 haloacid dehalogenase-like hydrolase M480_1523 PF00589 Phage integrase family M480_1523 PF02899 Phage integrase, N-terminal SAM-like domain M480_1524 PF04340 Protein of unknown function, DUF484 M480_1525 PF01678 Diaminopimelate epimerase M480_1526 PF13627 M480_1526 M480_1527 PF01491 Frataxin-like domain M480_1528 PF01295 M480_1528 M480_1528 PF12633 M480_1528 M480_1529 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M480_1529 PF03900 Porphobilinogen deaminase, C-terminal domain M480_153 PF01471 Putative peptidoglycan binding domain M480_153 PF01510 N-acetylmuramoyl-L-alanine amidase M480_1530 PF02602 Uroporphyrinogen-III synthase HemD M480_1531 PF04375 M480_1531 M480_1532 PF07219 M480_1532 M480_1533 PF01797 Transposase IS200 like M480_1539 PF00324 Amino acid permease M480_154 PF01614 Bacterial transcriptional regulator M480_154 PF09339 IclR helix-turn-helix domain M480_1540 PF03808 M480_1540 M480_1541 PF06899 M480_1541 M480_1542 PF07429 M480_1542 M480_1543 PF01943 M480_1543 M480_1544 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M480_1545 PF00583 Acetyltransferase (GNAT) family M480_1546 PF00483 Nucleotidyl transferase M480_1547 PF16363 M480_1547 M480_1548 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M480_1548 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M480_1548 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M480_1549 PF02350 UDP-N-acetylglucosamine 2-epimerase M480_155 PF14583 Oligogalacturonate lyase M480_1550 PF02706 Chain length determinant protein M480_1551 PF00953 Glycosyl transferase family 4 M480_1552 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M480_1552 PF07497 Rho termination factor, RNA-binding domain M480_1552 PF07498 Rho termination factor, N-terminal domain M480_1553 PF00085 Thioredoxin M480_1554 PF00270 DEAD/DEAH box helicase M480_1554 PF00271 Helicase conserved C-terminal domain M480_1555 PF02541 Ppx/GppA phosphatase family M480_1556 PF00580 UvrD/REP helicase N-terminal domain M480_1556 PF13361 UvrD-like helicase C-terminal domain M480_1557 PF13616 PPIC-type PPIASE domain M480_1558 PF05096 Glutamine cyclotransferase M480_1559 PF16970 M480_1559 M480_156 PF07690 Major Facilitator Superfamily M480_1560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_1560 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_1561 PF00577 Outer membrane usher protein M480_1561 PF13953 PapC C-terminal domain M480_1561 PF13954 PapC N-terminal domain M480_1562 PF00419 Fimbrial protein M480_1563 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_1563 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_1564 PF01320 Colicin immunity protein / pyocin immunity protein M480_1567 PF06958 S-type Pyocin M480_1569 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M480_1569 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain M480_157 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_157 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_1570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_1570 PF03466 LysR substrate binding domain M480_1572 PF11692 M480_1572 M480_1573 PF11692 M480_1573 M480_1574 PF06092 M480_1574 M480_1575 PF06092 M480_1575 M480_1576 PF00291 Pyridoxal-phosphate dependent enzyme M480_1576 PF00585 C-terminal regulatory domain of Threonine dehydratase M480_1577 PF00920 Dehydratase family M480_1578 PF01063 Aminotransferase class IV M480_1579 PF13710 ACT domain M480_158 PF00419 Fimbrial protein M480_1580 PF00205 Thiamine pyrophosphate enzyme, central domain M480_1580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M480_1580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M480_1581 PF01078 Magnesium chelatase, subunit ChlI M480_1581 PF13335 M480_1581 M480_1581 PF13541 Subunit ChlI of Mg-chelatase M480_1582 PF04219 M480_1582 M480_1583 PF02653 M480_1583 M480_1584 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_1584 PF03466 LysR substrate binding domain M480_1585 PF02653 M480_1585 M480_1586 PF00005 ABC transporter M480_1587 PF13407 Periplasmic binding protein domain M480_159 PF00577 Outer membrane usher protein M480_159 PF13953 PapC C-terminal domain M480_159 PF13954 PapC N-terminal domain M480_1595 PF01808 AICARFT/IMPCHase bienzyme M480_1595 PF02142 MGS-like domain M480_1596 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M480_1596 PF02843 Phosphoribosylglycinamide synthetase, C domain M480_1596 PF02844 Phosphoribosylglycinamide synthetase, N domain M480_1597 PF07356 M480_1597 M480_1598 PF00216 Bacterial DNA-binding protein M480_1599 PF04222 Protein of unknown function (DUF416) M480_16 PF05973 M480_16 M480_160 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_160 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_1600 PF04493 Endonuclease V M480_1601 PF01208 Uroporphyrinogen decarboxylase (URO-D) M480_1603 PF00293 NUDIX domain M480_1603 PF09297 NADH pyrophosphatase zinc ribbon domain M480_1604 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M480_1605 PF01964 ThiC family M480_1605 PF13667 ThiC-associated domain M480_1606 PF02581 Thiamine monophosphate synthase/TENI M480_1607 PF00899 ThiF family M480_1608 PF02597 ThiS family M480_1609 PF05690 Thiazole biosynthesis protein ThiG M480_161 PF16970 M480_161 M480_1610 PF05690 Thiazole biosynthesis protein ThiG M480_1611 PF04055 Radical SAM superfamily M480_1612 PF06968 Biotin and Thiamin Synthesis associated domain M480_1613 PF00623 RNA polymerase Rpb1, domain 2 M480_1613 PF04983 RNA polymerase Rpb1, domain 3 M480_1613 PF04997 RNA polymerase Rpb1, domain 1 M480_1613 PF04998 RNA polymerase Rpb1, domain 5 M480_1613 PF05000 RNA polymerase Rpb1, domain 4 M480_1614 PF00562 RNA polymerase Rpb2, domain 6 M480_1614 PF04560 RNA polymerase Rpb2, domain 7 M480_1614 PF04561 RNA polymerase Rpb2, domain 2 M480_1614 PF04563 RNA polymerase beta subunit M480_1614 PF04565 RNA polymerase Rpb2, domain 3 M480_1614 PF10385 RNA polymerase beta subunit external 1 domain M480_1616 PF00542 Ribosomal protein L7/L12 C-terminal domain M480_1616 PF16320 M480_1616 M480_1617 PF00466 Ribosomal protein L10 M480_1618 PF00687 Ribosomal protein L1p/L10e family M480_1619 PF00298 Ribosomal protein L11, RNA binding domain M480_1619 PF03946 Ribosomal protein L11, N-terminal domain M480_162 PF01435 Peptidase family M48 M480_1620 PF00467 KOW motif M480_1620 PF02357 Transcription termination factor nusG M480_1621 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M480_1622 PF00009 Elongation factor Tu GTP binding domain M480_1622 PF03143 Elongation factor Tu C-terminal domain M480_1622 PF03144 Elongation factor Tu domain 2 M480_1627 PF01695 IstB-like ATP binding protein M480_1628 PF01695 IstB-like ATP binding protein M480_1629 PF00665 Integrase core domain M480_1629 PF02796 Helix-turn-helix domain of resolvase M480_1630 PF12146 Putative lysophospholipase M480_1631 PF00324 Amino acid permease M480_1632 PF00221 Aromatic amino acid lyase M480_1633 PF01175 Urocanase M480_1633 PF17391 M480_1633 M480_1633 PF17392 M480_1633 M480_1634 PF00291 Pyridoxal-phosphate dependent enzyme M480_1635 PF00156 Phosphoribosyl transferase domain M480_1636 PF00892 EamA-like transporter family M480_1637 PF13535 ATP-grasp domain M480_1638 PF01497 Periplasmic binding protein M480_1639 PF01032 FecCD transport family M480_164 PF00595 PDZ domain (Also known as DHR or GLGF) M480_164 PF03572 Peptidase family S41 M480_164 PF11818 M480_164 M480_1640 PF01032 FecCD transport family M480_1641 PF13310 M480_1641 M480_1642 PF00005 ABC transporter M480_1644 PF01381 Helix-turn-helix M480_1645 PF13737 M480_1645 M480_1647 PF04606 M480_1647 M480_1649 PF00589 Phage integrase family M480_1649 PF13356 Domain of unknown function (DUF4102) M480_165 PF04352 ProQ/FINO family M480_165 PF17516 M480_165 M480_1651 PF12833 Helix-turn-helix domain M480_1651 PF13377 Periplasmic binding protein-like domain M480_1652 PF02653 M480_1652 M480_1653 PF00005 ABC transporter M480_1654 PF13407 Periplasmic binding protein domain M480_1656 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_1656 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_1657 PF00419 Fimbrial protein M480_1658 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_1658 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_1659 PF00577 Outer membrane usher protein M480_1659 PF13953 PapC C-terminal domain M480_166 PF13185 GAF domain M480_1660 PF00577 Outer membrane usher protein M480_1660 PF13954 PapC N-terminal domain M480_1661 PF00419 Fimbrial protein M480_1662 PF01757 M480_1662 M480_1663 PF13518 Helix-turn-helix domain M480_1664 PF00665 Integrase core domain M480_1664 PF13276 M480_1664 M480_1665 PF02219 Methylenetetrahydrofolate reductase M480_1666 PF00696 Amino acid kinase family M480_1666 PF00742 Homoserine dehydrogenase M480_1666 PF03447 Homoserine dehydrogenase, NAD binding domain M480_1667 PF01053 Cys/Met metabolism PLP-dependent enzyme M480_1668 PF01340 Met Apo-repressor, MetJ M480_1669 PF05360 M480_1669 M480_167 PF04403 M480_167 M480_1670 PF01197 Ribosomal protein L31 M480_1671 PF00270 DEAD/DEAH box helicase M480_1671 PF00271 Helicase conserved C-terminal domain M480_1673 PF00356 Bacterial regulatory proteins, lacI family M480_1673 PF13377 Periplasmic binding protein-like domain M480_1674 PF05036 Sporulation related domain M480_1675 PF00227 Proteasome subunit M480_1676 PF00004 ATPase family associated with various cellular activities (AAA) M480_1676 PF07724 AAA domain (Cdc48 subfamily) M480_1676 PF10431 C-terminal, D2-small domain, of ClpB protein M480_1677 PF01040 UbiA prenyltransferase family M480_1678 PF03737 Demethylmenaquinone methyltransferase M480_1679 PF14016 M480_1679 M480_168 PF02470 M480_168 M480_1681 PF13437 HlyD family secretion protein M480_1682 PF00005 ABC transporter M480_1682 PF00664 ABC transporter transmembrane region M480_1682 PF03412 Peptidase C39 family M480_1683 PF01797 Transposase IS200 like M480_1684 PF06005 Protein of unknown function (DUF904) M480_1685 PF00230 Major intrinsic protein M480_1686 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_1686 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_1687 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M480_1688 PF00175 Oxidoreductase NAD-binding domain M480_1688 PF00970 Oxidoreductase FAD-binding domain M480_1689 PF05656 M480_1689 M480_169 PF05229 M480_169 M480_1690 PF07305 M480_1690 M480_1691 PF00121 Triosephosphate isomerase M480_1692 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_1692 PF03466 LysR substrate binding domain M480_1693 PF02585 GlcNAc-PI de-N-acetylase M480_1694 PF03737 Demethylmenaquinone methyltransferase M480_1695 PF00939 Sodium:sulfate symporter transmembrane region M480_1696 PF00939 Sodium:sulfate symporter transmembrane region M480_1697 PF13531 Bacterial extracellular solute-binding protein M480_1698 PF13531 Bacterial extracellular solute-binding protein M480_17 PF00270 DEAD/DEAH box helicase M480_17 PF00271 Helicase conserved C-terminal domain M480_17 PF04408 Helicase associated domain (HA2) M480_17 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M480_17 PF11898 M480_17 M480_170 PF05229 M480_170 M480_1700 PF00365 Phosphofructokinase M480_1701 PF01545 Cation efflux family M480_1701 PF16916 M480_1701 M480_1702 PF04754 M480_1702 M480_1703 PF07813 LTXXQ motif family protein M480_1704 PF00072 Response regulator receiver domain M480_1704 PF00486 Transcriptional regulatory protein, C terminal M480_1705 PF00512 His Kinase A (phospho-acceptor) domain M480_1705 PF00672 HAMP domain M480_1705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_1705 PF16527 M480_1705 M480_1706 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M480_1706 PF02805 Metal binding domain of Ada M480_1706 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M480_1706 PF12833 Helix-turn-helix domain M480_1707 PF00588 SpoU rRNA Methylase family M480_1708 PF00132 Bacterial transferase hexapeptide (six repeats) M480_1708 PF06426 Serine acetyltransferase, N-terminal M480_1709 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M480_1709 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M480_171 PF05229 M480_171 M480_1710 PF02556 Preprotein translocase subunit SecB M480_1711 PF00462 Glutaredoxin M480_1712 PF00581 Rhodanese-like domain M480_1713 PF01676 Metalloenzyme superfamily M480_1713 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M480_1714 PF01551 Peptidase family M23 M480_1715 PF04748 Divergent polysaccharide deacetylase M480_1716 PF04748 Divergent polysaccharide deacetylase M480_1717 PF00107 Zinc-binding dehydrogenase M480_1717 PF08240 Alcohol dehydrogenase GroES-like domain M480_1718 PF00155 Aminotransferase class I and II M480_1719 PF01370 NAD dependent epimerase/dehydratase family M480_172 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_1720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M480_1721 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M480_1722 PF00534 Glycosyl transferases group 1 M480_1722 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M480_1723 PF00535 Glycosyl transferase family 2 M480_1724 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M480_1724 PF06827 Zinc finger found in FPG and IleRS M480_1724 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M480_1725 PF01467 Cytidylyltransferase M480_1726 PF00471 Ribosomal protein L33 M480_1727 PF00830 Ribosomal L28 family M480_1728 PF04002 RadC-like JAB domain M480_1729 PF02441 Flavoprotein M480_1729 PF04127 DNA / pantothenate metabolism flavoprotein M480_173 PF00577 Outer membrane usher protein M480_173 PF13953 PapC C-terminal domain M480_1730 PF00692 dUTPase M480_1731 PF00440 Bacterial regulatory proteins, tetR family M480_1732 PF00156 Phosphoribosyl transferase domain M480_1733 PF01138 3' exoribonuclease family, domain 1 M480_1733 PF03725 3' exoribonuclease family, domain 2 M480_1734 PF03755 M480_1734 M480_1734 PF08340 M480_1734 M480_1735 PF03458 M480_1735 M480_1736 PF01653 NAD-dependent DNA ligase adenylation domain M480_1736 PF03120 NAD-dependent DNA ligase OB-fold domain M480_1737 PF00625 Guanylate kinase M480_1738 PF01192 RNA polymerase Rpb6 M480_1739 PF02824 TGS domain M480_1739 PF04607 Region found in RelA / SpoT proteins M480_1739 PF13291 ACT domain M480_1739 PF13328 HD domain M480_174 PF05229 M480_174 M480_1740 PF00588 SpoU rRNA Methylase family M480_1740 PF12105 SpoU, rRNA methylase, C-terminal M480_1741 PF00270 DEAD/DEAH box helicase M480_1741 PF00271 Helicase conserved C-terminal domain M480_1741 PF17191 M480_1741 M480_1742 PF03616 M480_1742 M480_1743 PF00860 Permease family M480_1745 PF00583 Acetyltransferase (GNAT) family M480_1745 PF09500 Putative thioesterase (yiiD_Cterm) M480_1746 PF00665 Integrase core domain M480_1746 PF02796 Helix-turn-helix domain of resolvase M480_1747 PF01695 IstB-like ATP binding protein M480_1748 PF02580 D-Tyr-tRNA(Tyr) deacylase M480_1749 PF03631 M480_1749 M480_175 PF07351 M480_175 M480_1750 PF13419 Haloacid dehalogenase-like hydrolase M480_1751 PF00009 Elongation factor Tu GTP binding domain M480_1751 PF00679 Elongation factor G C-terminus M480_1751 PF03144 Elongation factor Tu domain 2 M480_1752 PF00120 Glutamine synthetase, catalytic domain M480_1752 PF03951 Glutamine synthetase, beta-Grasp domain M480_1753 PF00512 His Kinase A (phospho-acceptor) domain M480_1753 PF00989 PAS fold M480_1753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_1754 PF00072 Response regulator receiver domain M480_1754 PF00158 Sigma-54 interaction domain M480_1754 PF02954 Bacterial regulatory protein, Fis family M480_1755 PF04055 Radical SAM superfamily M480_1755 PF06969 HemN C-terminal domain M480_1756 PF04220 M480_1756 M480_1757 PF01926 50S ribosome-binding GTPase M480_1758 PF00476 DNA polymerase family A M480_1758 PF01367 5'-3' exonuclease, C-terminal SAM fold M480_1758 PF01612 3'-5' exonuclease M480_1758 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M480_1759 PF01323 DSBA-like thioredoxin domain M480_176 PF04266 ASCH domain M480_1760 PF01636 Phosphotransferase enzyme family M480_1761 PF06288 Protein of unknown function (DUF1040) M480_1762 PF12804 MobA-like NTP transferase domain M480_1763 PF03205 Molybdopterin guanine dinucleotide synthesis protein B M480_1764 PF00872 M480_1764 M480_1769 PF00392 Bacterial regulatory proteins, gntR family M480_1769 PF07729 FCD domain M480_177 PF00665 Integrase core domain M480_177 PF02796 Helix-turn-helix domain of resolvase M480_1771 PF07690 Major Facilitator Superfamily M480_1772 PF00294 pfkB family carbohydrate kinase M480_1773 PF00294 pfkB family carbohydrate kinase M480_1774 PF05025 RbsD / FucU transport protein family M480_1775 PF02705 M480_1775 M480_1776 PF07728 AAA domain (dynein-related subfamily) M480_1776 PF12592 Protein of unknown function (DUF3763) M480_1777 PF05762 VWA domain containing CoxE-like protein M480_1778 PF03590 Aspartate-ammonia ligase M480_1779 PF01037 AsnC family M480_1779 PF13412 Winged helix-turn-helix DNA-binding M480_178 PF01695 IstB-like ATP binding protein M480_1780 PF00258 Flavodoxin M480_1781 PF01134 Glucose inhibited division protein A M480_1781 PF13932 GidA associated domain 3 M480_1782 PF02527 rRNA small subunit methyltransferase G M480_1783 PF03899 M480_1783 M480_1784 PF00119 ATP synthase A chain M480_1785 PF00137 ATP synthase subunit C M480_1786 PF00430 ATP synthase B/B' CF(0) M480_1787 PF00213 ATP synthase delta (OSCP) subunit M480_1788 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M480_1788 PF00306 ATP synthase alpha/beta chain, C terminal domain M480_1788 PF02874 ATP synthase alpha/beta family, beta-barrel domain M480_1789 PF00231 ATP synthase M480_1790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M480_1790 PF02874 ATP synthase alpha/beta family, beta-barrel domain M480_1791 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M480_1791 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M480_1792 PF00132 Bacterial transferase hexapeptide (six repeats) M480_1792 PF12804 MobA-like NTP transferase domain M480_1793 PF01380 SIS domain M480_1793 PF13522 Glutamine amidotransferase domain M480_1794 PF12849 PBP superfamily domain M480_1795 PF00528 Binding-protein-dependent transport system inner membrane component M480_1796 PF00528 Binding-protein-dependent transport system inner membrane component M480_1797 PF00005 ABC transporter M480_1798 PF01895 PhoU domain M480_1799 PF04519 M480_1799 M480_18 PF02525 Flavodoxin-like fold M480_1800 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_1801 PF00528 Binding-protein-dependent transport system inner membrane component M480_1802 PF00528 Binding-protein-dependent transport system inner membrane component M480_1803 PF13419 Haloacid dehalogenase-like hydrolase M480_1804 PF00860 Permease family M480_1807 PF07055 Enoyl reductase FAD binding domain M480_1807 PF12241 Trans-2-enoyl-CoA reductase catalytic region M480_1807 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M480_1808 PF01926 50S ribosome-binding GTPase M480_1808 PF10396 GTP-binding protein TrmE N-terminus M480_1808 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE M480_1809 PF02096 60Kd inner membrane protein M480_1809 PF14849 YidC periplasmic domain M480_181 PF01734 Patatin-like phospholipase M480_1810 PF01809 M480_1810 M480_1811 PF00825 Ribonuclease P M480_1812 PF00468 Ribosomal protein L34 M480_1814 PF00308 Bacterial dnaA protein M480_1814 PF08299 Bacterial dnaA protein helix-turn-helix M480_1814 PF11638 DnaA N-terminal domain M480_1815 PF00712 DNA polymerase III beta subunit, N-terminal domain M480_1815 PF02767 DNA polymerase III beta subunit, central domain M480_1815 PF02768 DNA polymerase III beta subunit, C-terminal domain M480_1816 PF02463 RecF/RecN/SMC N terminal domain M480_1817 PF00204 DNA gyrase B M480_1817 PF00986 DNA gyrase B subunit, carboxyl terminus M480_1817 PF01751 Toprim domain M480_1817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_1818 PF08282 haloacid dehalogenase-like hydrolase M480_1819 PF00665 Integrase core domain M480_1819 PF13276 M480_1819 M480_1820 PF13518 Helix-turn-helix domain M480_1821 PF02423 Ornithine cyclodeaminase/mu-crystallin family M480_1822 PF00291 Pyridoxal-phosphate dependent enzyme M480_1824 PF07676 WD40-like Beta Propeller Repeat M480_1825 PF07119 M480_1825 M480_1826 PF00011 Hsp20/alpha crystallin family M480_1827 PF00011 Hsp20/alpha crystallin family M480_1828 PF02080 TrkA-C domain M480_1828 PF06826 M480_1828 M480_1829 PF00155 Aminotransferase class I and II M480_1831 PF00128 Alpha amylase, catalytic domain M480_1832 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M480_1832 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M480_1834 PF00691 OmpA family M480_1834 PF13488 M480_1834 M480_1835 PF13673 Acetyltransferase (GNAT) domain M480_1836 PF03352 Methyladenine glycosylase M480_1838 PF02091 Glycyl-tRNA synthetase alpha subunit M480_1839 PF02092 M480_1839 M480_1839 PF05746 DALR anticodon binding domain M480_184 PF00842 Alanine racemase, C-terminal domain M480_184 PF01168 Alanine racemase, N-terminal domain M480_1840 PF11254 M480_1840 M480_1841 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M480_1841 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M480_1841 PF02378 Phosphotransferase system, EIIC M480_1842 PF01232 Mannitol dehydrogenase Rossmann domain M480_1842 PF08125 Mannitol dehydrogenase C-terminal domain M480_1843 PF05068 Mannitol repressor M480_1845 PF10928 Protein of unknown function (DUF2810) M480_1846 PF10517 M480_1846 M480_1849 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_1849 PF00672 HAMP domain M480_1849 PF16591 M480_1849 M480_1850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M480_1850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M480_1851 PF02634 FdhD/NarQ family M480_1852 PF00384 Molybdopterin oxidoreductase M480_1852 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M480_1853 PF00384 Molybdopterin oxidoreductase M480_1853 PF01568 Molydopterin dinucleotide binding domain M480_1854 PF09163 Formate dehydrogenase N, transmembrane M480_1854 PF13247 4Fe-4S dicluster domain M480_1855 PF01292 Prokaryotic cytochrome b561 M480_1856 PF04216 Protein involved in formate dehydrogenase formation M480_1857 PF03841 L-seryl-tRNA selenium transferase M480_1857 PF12390 M480_1857 M480_1858 PF00009 Elongation factor Tu GTP binding domain M480_1858 PF09106 Elongation factor SelB, winged helix M480_1858 PF09107 Elongation factor SelB, winged helix M480_1859 PF01526 M480_1859 M480_1860 PF00872 M480_1860 M480_1861 PF13988 M480_1861 M480_1864 PF07690 Major Facilitator Superfamily M480_1865 PF00665 Integrase core domain M480_1865 PF13276 M480_1865 M480_1866 PF13518 Helix-turn-helix domain M480_1867 PF00455 M480_1867 M480_1867 PF08220 DeoR-like helix-turn-helix domain M480_1868 PF01694 Rhomboid family M480_1868 PF12122 Protein of unknown function (DUF3582) M480_1869 PF00581 Rhodanese-like domain M480_187 PF03895 YadA-like C-terminal region M480_187 PF05662 Coiled stalk of trimeric autotransporter adhesin M480_1870 PF00196 Bacterial regulatory proteins, luxR family M480_1871 PF00343 Carbohydrate phosphorylase M480_1872 PF02446 4-alpha-glucanotransferase M480_1873 PF01106 NifU-like domain M480_1873 PF01521 Iron-sulphur cluster biosynthesis M480_1874 PF00156 Phosphoribosyl transferase domain M480_1875 PF00561 alpha/beta hydrolase fold M480_1876 PF07338 Protein of unknown function (DUF1471) M480_1877 PF09012 FeoC like transcriptional regulator M480_1878 PF02421 Ferrous iron transport protein B M480_1878 PF07664 M480_1878 M480_1878 PF07670 Nucleoside recognition M480_1879 PF04023 FeoA domain M480_188 PF05658 Head domain of trimeric autotransporter adhesin M480_188 PF05662 Coiled stalk of trimeric autotransporter adhesin M480_1880 PF00575 S1 RNA binding domain M480_1880 PF09371 Tex-like protein N-terminal domain M480_1880 PF12836 Helix-hairpin-helix motif M480_1880 PF16921 M480_1880 M480_1881 PF01272 Transcription elongation factor, GreA/GreB, C-term M480_1881 PF03449 Transcription elongation factor, N-terminal M480_1882 PF00072 Response regulator receiver domain M480_1882 PF00486 Transcriptional regulatory protein, C terminal M480_1883 PF00512 His Kinase A (phospho-acceptor) domain M480_1883 PF00672 HAMP domain M480_1883 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_1884 PF01293 Phosphoenolpyruvate carboxykinase M480_1885 PF01430 Hsp33 protein M480_1886 PF01479 S4 domain M480_1887 PF13419 Haloacid dehalogenase-like hydrolase M480_1888 PF07095 Intracellular growth attenuator protein IgaA M480_189 PF01510 N-acetylmuramoyl-L-alanine amidase M480_1890 PF00293 NUDIX domain M480_1891 PF00905 Penicillin binding protein transpeptidase domain M480_1891 PF00912 Transglycosylase M480_1891 PF17092 M480_1891 M480_1892 PF11104 Type IV pilus assembly protein PilM; M480_1893 PF05137 M480_1893 M480_1895 PF10748 M480_1895 M480_1896 PF00263 M480_1896 M480_1896 PF03958 Bacterial type II/III secretion system short domain M480_1897 PF01202 Shikimate kinase M480_1898 PF01761 3-dehydroquinate synthase M480_1899 PF05036 Sporulation related domain M480_19 PF04198 Putative sugar-binding domain M480_190 PF04344 Chemotaxis phosphatase, CheZ M480_1900 PF02086 D12 class N6 adenine-specific DNA methyltransferase M480_1901 PF00834 Ribulose-phosphate 3 epimerase family M480_1902 PF13419 Haloacid dehalogenase-like hydrolase M480_1903 PF00579 tRNA synthetases class I (W and Y) M480_1904 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M480_1904 PF10414 Sirohaem synthase dimerisation region M480_1904 PF13241 Putative NAD(P)-binding M480_1904 PF14824 Sirohaem biosynthesis protein central M480_1905 PF01226 Formate/nitrite transporter M480_1906 PF13806 Rieske-like [2Fe-2S] domain M480_1907 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M480_1907 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M480_1907 PF04324 BFD-like [2Fe-2S] binding domain M480_1907 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_1908 PF07969 Amidohydrolase family M480_1909 PF07690 Major Facilitator Superfamily M480_191 PF00072 Response regulator receiver domain M480_1910 PF00593 TonB dependent receptor M480_1910 PF07715 TonB-dependent Receptor Plug Domain M480_1911 PF00356 Bacterial regulatory proteins, lacI family M480_1911 PF13377 Periplasmic binding protein-like domain M480_1912 PF02056 Family 4 glycosyl hydrolase M480_1912 PF11975 Family 4 glycosyl hydrolase C-terminal domain M480_1913 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M480_1914 PF05872 M480_1914 M480_1915 PF00117 Glutamine amidotransferase class-I M480_1916 PF00202 Aminotransferase class-III M480_1917 PF12805 M480_1917 M480_1917 PF13515 M480_1917 M480_1918 PF00027 Cyclic nucleotide-binding domain M480_1918 PF00325 Bacterial regulatory proteins, crp family M480_1919 PF02566 OsmC-like protein M480_192 PF00072 Response regulator receiver domain M480_192 PF01339 CheB methylesterase M480_1920 PF06836 M480_1920 M480_1921 PF00485 Phosphoribulokinase / Uridine kinase family M480_1922 PF06794 Uncharacterised protein family (UPF0270) M480_1923 PF00561 alpha/beta hydrolase fold M480_1924 PF01810 M480_1924 M480_1925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M480_1926 PF00005 ABC transporter M480_1927 PF00528 Binding-protein-dependent transport system inner membrane component M480_1928 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M480_1929 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M480_193 PF01739 CheR methyltransferase, SAM binding domain M480_193 PF03705 CheR methyltransferase, all-alpha domain M480_1931 PF00535 Glycosyl transferase family 2 M480_1932 PF00005 ABC transporter M480_1932 PF12848 ABC transporter M480_1933 PF02525 Flavodoxin-like fold M480_1934 PF00999 Sodium/hydrogen exchanger family M480_1934 PF02254 TrkA-N domain M480_1935 PF09526 M480_1935 M480_1936 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M480_1937 PF04102 SlyX M480_1938 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M480_1938 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M480_1939 PF08348 M480_1939 M480_1939 PF13309 M480_1939 M480_194 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_194 PF00672 HAMP domain M480_194 PF02203 Tar ligand binding domain homologue M480_1940 PF02635 DsrE/DsrF-like family M480_1941 PF02635 DsrE/DsrF-like family M480_1942 PF04077 DsrH like protein M480_1943 PF00164 Ribosomal protein S12/S23 M480_1944 PF00177 Ribosomal protein S7p/S5e M480_1945 PF00009 Elongation factor Tu GTP binding domain M480_1945 PF00679 Elongation factor G C-terminus M480_1945 PF03144 Elongation factor Tu domain 2 M480_1945 PF03764 Elongation factor G, domain IV M480_1945 PF14492 Elongation Factor G, domain II M480_1946 PF00009 Elongation factor Tu GTP binding domain M480_1946 PF03143 Elongation factor Tu C-terminal domain M480_1946 PF03144 Elongation factor Tu domain 2 M480_1947 PF01797 Transposase IS200 like M480_1948 PF04324 BFD-like [2Fe-2S] binding domain M480_1949 PF00210 Ferritin-like domain M480_195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_195 PF00672 HAMP domain M480_195 PF02203 Tar ligand binding domain homologue M480_1950 PF00338 Ribosomal protein S10p/S20e M480_1951 PF00297 Ribosomal protein L3 M480_1952 PF00573 Ribosomal protein L4/L1 family M480_1953 PF00276 Ribosomal protein L23 M480_1954 PF00181 Ribosomal Proteins L2, RNA binding domain M480_1954 PF03947 Ribosomal Proteins L2, C-terminal domain M480_1955 PF00203 Ribosomal protein S19 M480_1956 PF00237 Ribosomal protein L22p/L17e M480_1957 PF00189 Ribosomal protein S3, C-terminal domain M480_1957 PF07650 KH domain M480_1958 PF00252 Ribosomal protein L16p/L10e M480_1959 PF00831 Ribosomal L29 protein M480_1960 PF00366 Ribosomal protein S17 M480_1961 PF00238 Ribosomal protein L14p/L23e M480_1962 PF00467 KOW motif M480_1962 PF17136 M480_1962 M480_1963 PF00281 Ribosomal protein L5 M480_1963 PF00673 ribosomal L5P family C-terminus M480_1964 PF00253 Ribosomal protein S14p/S29e M480_1965 PF00410 Ribosomal protein S8 M480_1966 PF00347 Ribosomal protein L6 M480_1967 PF00861 Ribosomal L18p/L5e family M480_1968 PF00333 Ribosomal protein S5, N-terminal domain M480_1968 PF03719 Ribosomal protein S5, C-terminal domain M480_1969 PF00327 Ribosomal protein L30p/L7e M480_197 PF10101 M480_197 M480_1970 PF00828 Ribosomal protein L18e/L15 M480_1971 PF00344 SecY translocase M480_1972 PF00444 Ribosomal protein L36 M480_1973 PF00416 Ribosomal protein S13/S18 M480_1974 PF00411 Ribosomal protein S11 M480_1975 PF00163 Ribosomal protein S4/S9 N-terminal domain M480_1975 PF01479 S4 domain M480_1976 PF01000 RNA polymerase Rpb3/RpoA insert domain M480_1976 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M480_1976 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M480_1977 PF01196 Ribosomal protein L17 M480_1978 PF13411 MerR HTH family regulatory protein M480_1979 PF03889 M480_1979 M480_198 PF03797 Autotransporter beta-domain M480_1980 PF01741 Large-conductance mechanosensitive channel, MscL M480_1981 PF02080 TrkA-C domain M480_1981 PF02254 TrkA-N domain M480_1982 PF01029 NusB family M480_1982 PF01189 NOL1/NOP2/sun family M480_1983 PF00551 Formyl transferase M480_1983 PF02911 Formyl transferase, C-terminal domain M480_1984 PF01327 Polypeptide deformylase M480_1985 PF02481 DNA recombination-mediator protein A M480_1986 PF04361 M480_1986 M480_1987 PF01396 M480_1987 M480_1988 PF01300 Telomere recombination M480_1989 PF01488 Shikimate / quinate 5-dehydrogenase M480_1989 PF08501 Shikimate dehydrogenase substrate binding domain M480_199 PF08348 M480_199 M480_199 PF13309 M480_199 M480_1990 PF00132 Bacterial transferase hexapeptide (six repeats) M480_1996 PF01527 Transposase M480_1997 PF13276 M480_1997 M480_1997 PF13683 M480_1997 M480_1999 PF01695 IstB-like ATP binding protein M480_2 PF07338 Protein of unknown function (DUF1471) M480_20 PF01232 Mannitol dehydrogenase Rossmann domain M480_20 PF08125 Mannitol dehydrogenase C-terminal domain M480_200 PF01261 Xylose isomerase-like TIM barrel M480_2000 PF00665 Integrase core domain M480_2000 PF02796 Helix-turn-helix domain of resolvase M480_2001 PF12715 Abhydrolase family M480_2002 PF00474 Sodium:solute symporter family M480_2003 PF04341 M480_2003 M480_2004 PF00501 AMP-binding enzyme M480_2004 PF13193 AMP-binding enzyme C-terminal domain M480_2004 PF16177 M480_2004 M480_2005 PF00375 Sodium:dicarboxylate symporter family M480_2006 PF00072 Response regulator receiver domain M480_2006 PF00196 Bacterial regulatory proteins, luxR family M480_2007 PF00072 Response regulator receiver domain M480_2007 PF00512 His Kinase A (phospho-acceptor) domain M480_2007 PF01627 Hpt domain M480_2007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2008 PF00263 M480_2008 M480_2008 PF03958 Bacterial type II/III secretion system short domain M480_2009 PF16693 M480_2009 M480_201 PF01042 Endoribonuclease L-PSP M480_2010 PF08988 Protein of unknown function (DUF1895) M480_2011 PF12833 Helix-turn-helix domain M480_2012 PF09392 Type III secretion needle MxiH like M480_2013 PF06287 M480_2013 M480_2015 PF01514 Secretory protein of YscJ/FliF family M480_2016 PF13327 M480_2016 M480_2017 PF06188 M480_2017 M480_2018 PF00771 FHIPEP family M480_2019 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M480_2019 PF02874 ATP synthase alpha/beta family, beta-barrel domain M480_202 PF07690 Major Facilitator Superfamily M480_2022 PF01052 Surface presentation of antigens (SPOA) M480_2023 PF00813 M480_2023 M480_2024 PF01313 M480_2024 M480_2025 PF01311 M480_2025 M480_2026 PF01312 FlhB HrpN YscU SpaS Family M480_2027 PF04143 M480_2027 M480_2028 PF01206 Sulfurtransferase TusA M480_2029 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2029 PF03466 LysR substrate binding domain M480_203 PF01584 CheW-like domain M480_2031 PF01053 Cys/Met metabolism PLP-dependent enzyme M480_2032 PF00005 ABC transporter M480_2033 PF01032 FecCD transport family M480_2034 PF01497 Periplasmic binding protein M480_2035 PF05171 Haemin-degrading HemS M480_2036 PF00593 TonB dependent receptor M480_2036 PF07715 TonB-dependent Receptor Plug Domain M480_2037 PF10636 Hemin uptake protein hemP M480_2038 PF13460 NADH(P)-binding M480_2039 PF06228 Haem utilisation ChuX/HutX M480_204 PF01584 CheW-like domain M480_204 PF01627 Hpt domain M480_204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_204 PF02895 Signal transducing histidine kinase, homodimeric domain M480_204 PF09078 CheY binding M480_2040 PF04055 Radical SAM superfamily M480_2041 PF02219 Methylenetetrahydrofolate reductase M480_2043 PF15617 M480_2043 M480_2044 PF11202 M480_2044 M480_2044 PF15608 M480_2044 M480_2046 PF12500 M480_2046 M480_2046 PF15609 M480_2046 M480_2047 PF15632 M480_2047 M480_2048 PF02342 TerD domain M480_2049 PF02342 TerD domain M480_205 PF00691 OmpA family M480_205 PF13677 M480_205 M480_2050 PF05099 Tellurite resistance protein TerB M480_2051 PF03741 M480_2051 M480_2052 PF02342 TerD domain M480_2053 PF02342 TerD domain M480_2054 PF06551 M480_2054 M480_2055 PF00577 Outer membrane usher protein M480_2055 PF13953 PapC C-terminal domain M480_2055 PF13954 PapC N-terminal domain M480_2056 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_2059 PF01565 FAD binding domain M480_2059 PF08031 Berberine and berberine like M480_206 PF01618 M480_206 M480_2060 PF03797 Autotransporter beta-domain M480_2062 PF04345 Chorismate lyase M480_2063 PF01040 UbiA prenyltransferase family M480_2064 PF01553 Acyltransferase M480_2065 PF01219 Prokaryotic diacylglycerol kinase M480_2066 PF00717 Peptidase S24-like M480_2066 PF01726 LexA DNA binding domain M480_2067 PF01475 Ferric uptake regulator family M480_2068 PF01207 Dihydrouridine synthase (Dus) M480_2069 PF09583 M480_2069 M480_207 PF05280 Flagellar transcriptional activator (FlhC) M480_2070 PF00107 Zinc-binding dehydrogenase M480_2070 PF08240 Alcohol dehydrogenase GroES-like domain M480_2071 PF00772 DnaB-like helicase N terminal domain M480_2071 PF03796 DnaB-like helicase C terminal domain M480_2072 PF00842 Alanine racemase, C-terminal domain M480_2072 PF01168 Alanine racemase, N-terminal domain M480_2073 PF00155 Aminotransferase class I and II M480_2074 PF04237 YjbR M480_2075 PF00005 ABC transporter M480_2076 PF00436 Single-strand binding protein family M480_2077 PF05336 Domain of unknown function (DUF718) M480_2078 PF00465 Iron-containing alcohol dehydrogenase M480_2079 PF00596 Class II Aldolase and Adducin N-terminal domain M480_208 PF05247 Flagellar transcriptional activator (FlhD) M480_2080 PF06134 L-rhamnose isomerase (RhaA) M480_2081 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_2081 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_2084 PF02311 AraC-like ligand binding domain M480_2084 PF12833 Helix-turn-helix domain M480_2085 PF02311 AraC-like ligand binding domain M480_2085 PF12833 Helix-turn-helix domain M480_2086 PF06379 M480_2086 M480_2089 PF03272 M480_2089 M480_2089 PF13402 Peptidase M60-like family M480_209 PF00122 E1-E2 ATPase M480_209 PF00689 Cation transporting ATPase, C-terminus M480_209 PF00690 Cation transporter/ATPase, N-terminus M480_209 PF00702 haloacid dehalogenase-like hydrolase M480_2092 PF00440 Bacterial regulatory proteins, tetR family M480_2093 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_2093 PF13247 4Fe-4S dicluster domain M480_2093 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M480_2094 PF12800 4Fe-4S binding domain M480_2094 PF13187 4Fe-4S dicluster domain M480_2095 PF00384 Molybdopterin oxidoreductase M480_2095 PF01568 Molydopterin dinucleotide binding domain M480_2095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M480_2096 PF02683 M480_2096 M480_2096 PF11412 Disulphide bond corrector protein DsbC M480_2096 PF13899 Thioredoxin-like M480_2097 PF03091 CutA1 divalent ion tolerance protein M480_2098 PF03605 M480_2098 M480_2099 PF00206 Lyase M480_2099 PF10415 Fumarase C C-terminus M480_21 PF07027 M480_21 M480_210 PF02308 M480_210 M480_2100 PF04186 M480_2100 M480_2101 PF00166 Chaperonin 10 Kd subunit M480_2102 PF00118 TCP-1/cpn60 chaperonin family M480_2103 PF13698 M480_2103 M480_2104 PF04055 Radical SAM superfamily M480_2104 PF13353 4Fe-4S single cluster domain M480_2105 PF01132 Elongation factor P (EF-P) OB domain M480_2105 PF08207 Elongation factor P (EF-P) KOW-like domain M480_2105 PF09285 Elongation factor P, C-terminal M480_2106 PF00893 Small Multidrug Resistance protein M480_2107 PF02313 Fumarate reductase subunit D M480_2108 PF02300 Fumarate reductase subunit C M480_2109 PF13085 2Fe-2S iron-sulfur cluster binding domain M480_2109 PF13183 4Fe-4S dicluster domain M480_211 PF00872 M480_211 M480_2110 PF00890 FAD binding domain M480_2110 PF02910 Fumarate reductase flavoprotein C-term M480_2111 PF00152 tRNA synthetases class II (D, K and N) M480_2112 PF00924 Mechanosensitive ion channel M480_2112 PF12794 M480_2112 M480_2112 PF12795 M480_2112 M480_2113 PF02666 M480_2113 M480_2114 PF03193 Protein of unknown function, DUF258 M480_2115 PF00929 Exonuclease M480_2118 PF08331 M480_2118 M480_2118 PF13484 M480_2118 M480_2119 PF01256 Carbohydrate kinase M480_2119 PF03853 YjeF-related protein N-terminus M480_212 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_212 PF02203 Tar ligand binding domain homologue M480_2120 PF02367 Uncharacterised P-loop hydrolase UPF0079 M480_2121 PF01476 LysM domain M480_2121 PF01520 N-acetylmuramoyl-L-alanine amidase M480_2121 PF11741 AMIN domain M480_2122 PF01119 DNA mismatch repair protein, C-terminal domain M480_2122 PF08676 MutL C terminal dimerisation domain M480_2122 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2123 PF01715 IPP transferase M480_2124 PF17209 M480_2124 M480_2125 PF01926 50S ribosome-binding GTPase M480_2125 PF13167 M480_2125 M480_2125 PF16360 M480_2125 M480_2126 PF01145 SPFH domain / Band 7 family M480_2126 PF12221 M480_2126 M480_2127 PF01145 SPFH domain / Band 7 family M480_2128 PF09838 M480_2128 M480_2129 PF00709 Adenylosuccinate synthetase M480_213 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_2130 PF02082 Transcriptional regulator M480_2131 PF00575 S1 RNA binding domain M480_2131 PF00773 RNB domain M480_2131 PF08206 Ribonuclease B OB domain M480_2131 PF08461 Ribonuclease R winged-helix domain M480_2132 PF00588 SpoU rRNA Methylase family M480_2132 PF08032 RNA 2'-O ribose methyltransferase substrate binding M480_2133 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M480_2133 PF02770 Acyl-CoA dehydrogenase, middle domain M480_2134 PF07338 Protein of unknown function (DUF1471) M480_2135 PF02796 Helix-turn-helix domain of resolvase M480_2136 PF00665 Integrase core domain M480_2137 PF01695 IstB-like ATP binding protein M480_2138 PF00884 Sulfatase M480_2138 PF08019 M480_2138 M480_2139 PF00072 Response regulator receiver domain M480_2139 PF00196 Bacterial regulatory proteins, luxR family M480_214 PF10781 M480_214 M480_2140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2140 PF05231 M480_2140 M480_2140 PF07730 Histidine kinase M480_2141 PF07690 Major Facilitator Superfamily M480_2144 PF05860 haemagglutination activity domain M480_2145 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M480_2145 PF08479 POTRA domain, ShlB-type M480_2145 PF17287 M480_2145 M480_2147 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_2148 PF00528 Binding-protein-dependent transport system inner membrane component M480_2149 PF00528 Binding-protein-dependent transport system inner membrane component M480_2149 PF12911 M480_2149 M480_215 PF00313 'Cold-shock' DNA-binding domain M480_2150 PF00005 ABC transporter M480_2150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M480_2151 PF00005 ABC transporter M480_2151 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M480_2152 PF01270 Glycosyl hydrolases family 8 M480_2153 PF00563 EAL domain M480_2153 PF00990 GGDEF domain M480_2153 PF17154 M480_2153 M480_2154 PF06178 Oligogalacturonate-specific porin protein (KdgM) M480_2155 PF06917 Periplasmic pectate lyase M480_2156 PF00754 F5/8 type C domain M480_2157 PF00375 Sodium:dicarboxylate symporter family M480_2159 PF00675 Insulinase (Peptidase family M16) M480_2159 PF05193 Peptidase M16 inactive domain M480_216 PF00703 Glycosyl hydrolases family 2 M480_216 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M480_216 PF02837 Glycosyl hydrolases family 2, sugar binding domain M480_216 PF02929 Beta galactosidase small chain M480_216 PF16353 M480_216 M480_2160 PF00294 pfkB family carbohydrate kinase M480_2161 PF01361 Tautomerase enzyme M480_2162 PF00563 EAL domain M480_2163 PF05170 M480_2163 M480_2164 PF02611 CDP-diacylglycerol pyrophosphatase M480_2165 PF03631 M480_2165 M480_2166 PF03212 Pertactin M480_2166 PF03797 Autotransporter beta-domain M480_2167 PF11692 M480_2167 M480_2168 PF06092 M480_2168 M480_2169 PF06092 M480_2169 M480_217 PF00107 Zinc-binding dehydrogenase M480_217 PF08240 Alcohol dehydrogenase GroES-like domain M480_2170 PF02595 Glycerate kinase family M480_2171 PF02447 M480_2171 M480_2172 PF05651 M480_2172 M480_2172 PF13556 PucR C-terminal helix-turn-helix domain M480_2173 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M480_2173 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_2174 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ M480_2175 PF01432 Peptidase family M3 M480_2176 PF04445 Putative SAM-dependent methyltransferase M480_2177 PF08548 Peptidase M10 serralysin C terminal M480_2178 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M480_2178 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M480_2179 PF00582 Universal stress protein family M480_218 PF10777 M480_218 M480_2180 PF10625 M480_2180 M480_2181 PF01797 Transposase IS200 like M480_2182 PF01384 M480_2182 M480_2183 PF03486 HI0933-like protein M480_2184 PF00072 Response regulator receiver domain M480_2184 PF00512 His Kinase A (phospho-acceptor) domain M480_2184 PF00672 HAMP domain M480_2184 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2184 PF12860 M480_2184 M480_2185 PF00005 ABC transporter M480_2186 PF02653 M480_2186 M480_2187 PF13407 Periplasmic binding protein domain M480_2188 PF07385 Protein of unknown function (DUF1498) M480_2189 PF01116 Fructose-bisphosphate aldolase class-II M480_219 PF01037 AsnC family M480_219 PF13412 Winged helix-turn-helix DNA-binding M480_2190 PF00294 pfkB family carbohydrate kinase M480_2191 PF00072 Response regulator receiver domain M480_2191 PF00486 Transcriptional regulatory protein, C terminal M480_2193 PF02678 Pirin M480_2194 PF00356 Bacterial regulatory proteins, lacI family M480_2195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M480_2196 PF02447 M480_2196 M480_2197 PF01202 Shikimate kinase M480_22 PF13617 M480_22 M480_220 PF11004 M480_220 M480_2201 PF01914 M480_2201 M480_2202 PF01118 Semialdehyde dehydrogenase, NAD binding domain M480_2202 PF02774 Semialdehyde dehydrogenase, dimerisation domain M480_2208 PF02369 Bacterial Ig-like domain (group 1) M480_2208 PF11924 Protein of unknown function (DUF3442) M480_2209 PF06580 M480_2209 M480_2209 PF07694 5TMR of 5TMR-LYT M480_221 PF14001 M480_221 M480_2210 PF00128 Alpha amylase, catalytic domain M480_2210 PF02806 Alpha amylase, C-terminal all-beta domain M480_2210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M480_2211 PF00128 Alpha amylase, catalytic domain M480_2211 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M480_2212 PF00483 Nucleotidyl transferase M480_2213 PF00534 Glycosyl transferases group 1 M480_2213 PF08323 Starch synthase catalytic domain M480_2214 PF00343 Carbohydrate phosphorylase M480_2215 PF01266 FAD dependent oxidoreductase M480_2215 PF16901 M480_2215 M480_2217 PF06092 M480_2217 M480_2218 PF00665 Integrase core domain M480_2218 PF13276 M480_2218 M480_2219 PF13518 Helix-turn-helix domain M480_222 PF00328 Histidine phosphatase superfamily (branch 2) M480_2220 PF00013 KH domain M480_2220 PF00575 S1 RNA binding domain M480_2220 PF01138 3' exoribonuclease family, domain 1 M480_2220 PF03725 3' exoribonuclease family, domain 2 M480_2220 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M480_2221 PF07719 Tetratricopeptide repeat M480_2221 PF13181 Tetratricopeptide repeat M480_2222 PF00270 DEAD/DEAH box helicase M480_2222 PF00271 Helicase conserved C-terminal domain M480_2222 PF03880 DbpA RNA binding domain M480_2222 PF12343 M480_2222 M480_2223 PF05973 M480_2223 M480_2224 PF01381 Helix-turn-helix M480_2225 PF00296 Luciferase-like monooxygenase M480_2227 PF16576 M480_2227 M480_2228 PF00873 AcrB/AcrD/AcrF family M480_2229 PF02321 Outer membrane efflux protein M480_2230 PF01136 M480_2230 M480_2231 PF01136 M480_2231 M480_2232 PF02036 SCP-2 sterol transfer family M480_2233 PF00583 Acetyltransferase (GNAT) family M480_2234 PF01541 GIY-YIG catalytic domain M480_2235 PF05426 Alginate lyase M480_2235 PF07940 Heparinase II/III-like protein M480_2236 PF05426 Alginate lyase M480_2237 PF01547 Bacterial extracellular solute-binding protein M480_2238 PF00528 Binding-protein-dependent transport system inner membrane component M480_2239 PF00528 Binding-protein-dependent transport system inner membrane component M480_224 PF01638 HxlR-like helix-turn-helix M480_2240 PF00005 ABC transporter M480_2240 PF08402 TOBE domain M480_2241 PF05426 Alginate lyase M480_2244 PF12706 Beta-lactamase superfamily domain M480_2245 PF13238 AAA domain M480_2246 PF07969 Amidohydrolase family M480_2247 PF00005 ABC transporter M480_2248 PF00005 ABC transporter M480_2249 PF06007 M480_2249 M480_225 PF05368 NmrA-like family M480_2250 PF05861 M480_2250 M480_2251 PF05845 Bacterial phosphonate metabolism protein (PhnH) M480_2252 PF06754 M480_2252 M480_2253 PF00392 Bacterial regulatory proteins, gntR family M480_2253 PF07702 UTRA domain M480_2255 PF13353 4Fe-4S single cluster domain M480_2256 PF03477 ATP cone domain M480_2256 PF13597 Anaerobic ribonucleoside-triphosphate reductase M480_2257 PF00005 ABC transporter M480_2258 PF00005 ABC transporter M480_2259 PF00528 Binding-protein-dependent transport system inner membrane component M480_2259 PF12911 M480_2259 M480_226 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_226 PF08447 PAS fold M480_2260 PF00528 Binding-protein-dependent transport system inner membrane component M480_2262 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_2263 PF04074 Domain of unknown function (DUF386) M480_2264 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M480_2264 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M480_2265 PF06877 Regulator of ribonuclease activity B M480_2266 PF00583 Acetyltransferase (GNAT) family M480_2267 PF00133 tRNA synthetases class I (I, L, M and V) M480_2267 PF08264 Anticodon-binding domain of tRNA M480_2267 PF10458 Valyl tRNA synthetase tRNA binding arm M480_2268 PF04364 DNA polymerase III chi subunit, HolC M480_2269 PF00883 Cytosol aminopeptidase family, catalytic domain M480_2269 PF02789 Cytosol aminopeptidase family, N-terminal domain M480_2270 PF03739 M480_2270 M480_2271 PF03739 M480_2271 M480_2273 PF00589 Phage integrase family M480_2273 PF13356 Domain of unknown function (DUF4102) M480_2274 PF03235 M480_2274 M480_2274 PF07510 M480_2274 M480_2275 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2276 PF01695 IstB-like ATP binding protein M480_2277 PF00665 Integrase core domain M480_2277 PF02796 Helix-turn-helix domain of resolvase M480_2278 PF07728 AAA domain (dynein-related subfamily) M480_2279 PF10117 M480_2279 M480_228 PF00356 Bacterial regulatory proteins, lacI family M480_228 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M480_2280 PF01527 Transposase M480_2281 PF01555 DNA methylase M480_2282 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2287 PF13558 Putative exonuclease SbcCD, C subunit M480_2288 PF09983 M480_2288 M480_2288 PF11795 M480_2288 M480_2289 PF01435 Peptidase family M48 M480_229 PF00180 Isocitrate/isopropylmalate dehydrogenase M480_2290 PF05987 M480_2290 M480_2292 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M480_2293 PF12833 Helix-turn-helix domain M480_2294 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M480_2295 PF02378 Phosphotransferase system, EIIC M480_2296 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M480_2296 PF00381 PTS HPr component phosphorylation site M480_2296 PF00391 PEP-utilising enzyme, mobile domain M480_2296 PF02896 PEP-utilising enzyme, TIM barrel domain M480_2296 PF05524 PEP-utilising enzyme, N-terminal M480_2297 PF10696 M480_2297 M480_2298 PF03992 Antibiotic biosynthesis monooxygenase M480_2299 PF01791 DeoC/LacD family aldolase M480_23 PF11739 M480_23 M480_230 PF00849 RNA pseudouridylate synthase M480_2300 PF13407 Periplasmic binding protein domain M480_2301 PF02653 M480_2301 M480_2302 PF02653 M480_2302 M480_2303 PF00005 ABC transporter M480_2304 PF04198 Putative sugar-binding domain M480_2305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_2305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_2306 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M480_2307 PF04932 M480_2307 M480_2308 PF06305 M480_2308 M480_2309 PF16576 M480_2309 M480_231 PF00293 NUDIX domain M480_2310 PF00873 AcrB/AcrD/AcrF family M480_2312 PF01095 Pectinesterase M480_2313 PF00990 GGDEF domain M480_2314 PF07256 M480_2314 M480_2316 PF05175 Methyltransferase small domain M480_2316 PF08468 Methyltransferase small domain N-terminal M480_2317 PF03603 DNA polymerase III psi subunit M480_2318 PF00583 Acetyltransferase (GNAT) family M480_2319 PF00009 Elongation factor Tu GTP binding domain M480_2319 PF03144 Elongation factor Tu domain 2 M480_2319 PF16658 M480_2319 M480_232 PF03054 tRNA methyl transferase M480_2320 PF04972 BON domain M480_2321 PF07043 M480_2321 M480_2322 PF01734 Patatin-like phospholipase M480_2323 PF01026 TatD related DNase M480_2324 PF01773 Na+ dependent nucleoside transporter N-terminus M480_2324 PF07670 Nucleoside recognition M480_2325 PF07662 Na+ dependent nucleoside transporter C-terminus M480_2326 PF01791 DeoC/LacD family aldolase M480_2327 PF00591 Glycosyl transferase family, a/b domain M480_2327 PF02885 Glycosyl transferase family, helical bundle domain M480_2327 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M480_2328 PF01676 Metalloenzyme superfamily M480_2329 PF01048 Phosphorylase superfamily M480_233 PF04356 Protein of unknown function (DUF489) M480_2330 PF10144 M480_2330 M480_2331 PF12710 haloacid dehalogenase-like hydrolase M480_2332 PF13481 AAA domain M480_2332 PF13541 Subunit ChlI of Mg-chelatase M480_2333 PF01381 Helix-turn-helix M480_2333 PF13521 AAA domain M480_2334 PF13776 M480_2334 M480_2336 PF00005 ABC transporter M480_2336 PF12848 ABC transporter M480_2337 PF00691 OmpA family M480_2338 PF00990 GGDEF domain M480_2338 PF17152 M480_2338 M480_2339 PF13689 M480_2339 M480_234 PF00206 Lyase M480_234 PF08328 Adenylosuccinate lyase C-terminal M480_2340 PF00122 E1-E2 ATPase M480_2340 PF00689 Cation transporting ATPase, C-terminus M480_2340 PF00690 Cation transporter/ATPase, N-terminus M480_2340 PF00702 haloacid dehalogenase-like hydrolase M480_2341 PF01464 Transglycosylase SLT domain M480_2341 PF14718 Soluble lytic murein transglycosylase L domain M480_2342 PF01931 Protein of unknown function DUF84 M480_2343 PF01371 Trp repressor protein M480_2344 PF06445 GyrI-like small molecule binding domain M480_2344 PF12833 Helix-turn-helix domain M480_2345 PF00300 Histidine phosphatase superfamily (branch 1) M480_2347 PF05981 M480_2347 M480_2348 PF00072 Response regulator receiver domain M480_2348 PF00486 Transcriptional regulatory protein, C terminal M480_235 PF13505 Outer membrane protein beta-barrel domain M480_2350 PF00696 Amino acid kinase family M480_2350 PF00742 Homoserine dehydrogenase M480_2350 PF01842 ACT domain M480_2350 PF03447 Homoserine dehydrogenase, NAD binding domain M480_2350 PF13840 ACT domain M480_2351 PF00288 GHMP kinases N terminal domain M480_2351 PF08544 GHMP kinases C terminal M480_2352 PF00291 Pyridoxal-phosphate dependent enzyme M480_2352 PF14821 Threonine synthase N terminus M480_2354 PF03883 M480_2354 M480_2355 PF00923 Transaldolase M480_2356 PF00994 Probable molybdopterin binding domain M480_2357 PF07690 Major Facilitator Superfamily M480_2359 PF01184 M480_2359 M480_236 PF00072 Response regulator receiver domain M480_236 PF00486 Transcriptional regulatory protein, C terminal M480_2360 PF00012 Hsp70 protein M480_2361 PF00226 DnaJ domain M480_2361 PF00684 DnaJ central domain M480_2361 PF01556 DnaJ C terminal domain M480_2362 PF06965 Na+/H+ antiporter 1 M480_2363 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2363 PF03466 LysR substrate binding domain M480_2364 PF01649 Ribosomal protein S20 M480_2365 PF01687 Riboflavin kinase M480_2365 PF06574 FAD synthetase M480_2366 PF00133 tRNA synthetases class I (I, L, M and V) M480_2366 PF06827 Zinc finger found in FPG and IleRS M480_2366 PF08264 Anticodon-binding domain of tRNA M480_2367 PF01252 M480_2367 M480_2368 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M480_2369 PF02401 LytB protein M480_237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_237 PF08918 PhoQ Sensor M480_2370 PF01113 Dihydrodipicolinate reductase, N-terminus M480_2370 PF05173 Dihydrodipicolinate reductase, C-terminus M480_2371 PF00117 Glutamine amidotransferase class-I M480_2371 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M480_2372 PF02142 MGS-like domain M480_2372 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M480_2372 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M480_2373 PF01810 M480_2373 M480_2374 PF06738 M480_2374 M480_2375 PF12821 M480_2375 M480_2376 PF00186 Dihydrofolate reductase M480_2377 PF12582 M480_2377 M480_2378 PF00149 Calcineurin-like phosphoesterase M480_2379 PF04379 Protein of unknown function (DUF525) M480_238 PF08007 Cupin superfamily protein M480_2380 PF00398 Ribosomal RNA adenine dimethylase M480_2381 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M480_2382 PF00639 PPIC-type PPIASE domain M480_2382 PF09312 SurA N-terminal domain M480_2383 PF03968 OstA-like protein M480_2383 PF04453 Organic solvent tolerance protein M480_2384 PF00226 DnaJ domain M480_2384 PF05099 Tellurite resistance protein TerB M480_2385 PF00849 RNA pseudouridylate synthase M480_2386 PF10074 M480_2386 M480_2387 PF06812 M480_2387 M480_2388 PF05591 M480_2388 M480_2389 PF05943 M480_2389 M480_239 PF01546 Peptidase family M20/M25/M40 M480_239 PF07687 Peptidase dimerisation domain M480_2390 PF05638 Protein of unknown function (DUF796) M480_2391 PF04965 Gene 25-like lysozyme M480_2392 PF05947 M480_2392 M480_2393 PF06996 M480_2393 M480_2394 PF00004 ATPase family associated with various cellular activities (AAA) M480_2394 PF02861 Clp amino terminal domain M480_2394 PF07724 AAA domain (Cdc48 subfamily) M480_2395 PF05954 Phage late control gene D protein (GPD) M480_2396 PF09937 M480_2396 M480_2396 PF13599 Pentapeptide repeats (9 copies) M480_2397 PF00805 Pentapeptide repeats (8 copies) M480_2397 PF13599 Pentapeptide repeats (9 copies) M480_2398 PF12059 M480_2398 M480_2399 PF13665 M480_2399 M480_24 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M480_24 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M480_240 PF02146 Sir2 family M480_2400 PF12790 Type VI secretion lipoprotein M480_2401 PF05936 M480_2401 M480_2402 PF00691 OmpA family M480_2402 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M480_2403 PF06744 M480_2403 M480_2403 PF06761 M480_2403 M480_2403 PF14331 M480_2403 M480_2405 PF00176 SNF2 family N-terminal domain M480_2405 PF00271 Helicase conserved C-terminal domain M480_2405 PF12137 RNA polymerase recycling family C-terminal M480_2406 PF00136 DNA polymerase family B M480_2406 PF03104 DNA polymerase family B, exonuclease domain M480_2407 PF09335 M480_2407 M480_2408 PF00005 ABC transporter M480_2409 PF00528 Binding-protein-dependent transport system inner membrane component M480_241 PF00480 ROK family M480_2410 PF13343 Bacterial extracellular solute-binding protein M480_2412 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_2412 PF12793 M480_2412 M480_2413 PF07690 Major Facilitator Superfamily M480_2414 PF00694 Aconitase C-terminal domain M480_2415 PF00330 Aconitase family (aconitate hydratase) M480_2416 PF00180 Isocitrate/isopropylmalate dehydrogenase M480_2417 PF00682 HMGL-like M480_2417 PF08502 LeuA allosteric (dimerisation) domain M480_2419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2419 PF03466 LysR substrate binding domain M480_242 PF02687 M480_242 M480_242 PF12704 MacB-like periplasmic core domain M480_2420 PF00501 AMP-binding enzyme M480_2421 PF00872 M480_2421 M480_2422 PF00205 Thiamine pyrophosphate enzyme, central domain M480_2422 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M480_2422 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M480_2423 PF01842 ACT domain M480_2423 PF10369 Small subunit of acetolactate synthase M480_2424 PF01797 Transposase IS200 like M480_2425 PF00356 Bacterial regulatory proteins, lacI family M480_2425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M480_2426 PF01797 Transposase IS200 like M480_2427 PF06610 M480_2427 M480_2428 PF02381 MraZ protein M480_2429 PF01795 MraW methylase family M480_243 PF00005 ABC transporter M480_2430 PF04999 M480_2430 M480_2431 PF00905 Penicillin binding protein transpeptidase domain M480_2431 PF03717 Penicillin-binding Protein dimerisation domain M480_2432 PF01225 Mur ligase family, catalytic domain M480_2432 PF02875 Mur ligase family, glutamate ligase domain M480_2432 PF08245 Mur ligase middle domain M480_2433 PF01225 Mur ligase family, catalytic domain M480_2433 PF02875 Mur ligase family, glutamate ligase domain M480_2433 PF08245 Mur ligase middle domain M480_2434 PF00953 Glycosyl transferase family 4 M480_2434 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M480_2435 PF02875 Mur ligase family, glutamate ligase domain M480_2435 PF08245 Mur ligase middle domain M480_2436 PF01098 M480_2436 M480_2437 PF03033 Glycosyltransferase family 28 N-terminal domain M480_2437 PF04101 Glycosyltransferase family 28 C-terminal domain M480_2438 PF01225 Mur ligase family, catalytic domain M480_2438 PF02875 Mur ligase family, glutamate ligase domain M480_2438 PF08245 Mur ligase middle domain M480_2439 PF01820 D-ala D-ala ligase N-terminus M480_2439 PF07478 D-ala D-ala ligase C-terminus M480_244 PF02687 M480_244 M480_244 PF12704 MacB-like periplasmic core domain M480_2440 PF03799 Cell division protein FtsQ M480_2440 PF08478 POTRA domain, FtsQ-type M480_2441 PF02491 SHS2 domain inserted in FTSA M480_2441 PF14450 Cell division protein FtsA M480_2442 PF00091 Tubulin/FtsZ family, GTPase domain M480_2442 PF12327 FtsZ family, C-terminal domain M480_2443 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M480_2444 PF05258 M480_2444 M480_2445 PF06558 M480_2445 M480_2446 PF01043 SecA preprotein cross-linking domain M480_2446 PF02810 SEC-C motif M480_2446 PF07516 SecA Wing and Scaffold domain M480_2446 PF07517 SecA DEAD-like domain M480_2447 PF00293 NUDIX domain M480_2448 PF01695 IstB-like ATP binding protein M480_2449 PF01695 IstB-like ATP binding protein M480_245 PF00270 DEAD/DEAH box helicase M480_245 PF00271 Helicase conserved C-terminal domain M480_245 PF02559 CarD-like/TRCF domain M480_245 PF03461 TRCF domain M480_2450 PF00665 Integrase core domain M480_2450 PF02796 Helix-turn-helix domain of resolvase M480_2451 PF01797 Transposase IS200 like M480_2452 PF03884 Domain of unknown function (DUF329) M480_2453 PF07072 Protein of unknown function (DUF1342) M480_2454 PF01121 Dephospho-CoA kinase M480_2455 PF00478 IMP dehydrogenase / GMP reductase domain M480_2456 PF00482 Type II secretion system (T2SS), protein F M480_2457 PF00437 Type II/IV secretion system protein M480_2458 PF07963 Prokaryotic N-terminal methylation motif M480_2459 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M480_2459 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M480_246 PF05433 M480_246 M480_2460 PF01510 N-acetylmuramoyl-L-alanine amidase M480_2461 PF17113 M480_2461 M480_2462 PF00324 Amino acid permease M480_2463 PF00392 Bacterial regulatory proteins, gntR family M480_2463 PF07729 FCD domain M480_2464 PF00456 Transketolase, thiamine diphosphate binding domain M480_2465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M480_2465 PF00364 Biotin-requiring enzyme M480_2465 PF02817 e3 binding domain M480_2466 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M480_2466 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_2467 PF01797 Transposase IS200 like M480_2468 PF00330 Aconitase family (aconitate hydratase) M480_2468 PF06434 Aconitate hydratase 2 N-terminus M480_2468 PF11791 Aconitate B N-terminal domain M480_2469 PF06062 M480_2469 M480_247 PF00872 M480_247 M480_2470 PF00892 EamA-like transporter family M480_2471 PF02675 S-adenosylmethionine decarboxylase M480_2472 PF01564 Spermine/spermidine synthase M480_2472 PF17284 M480_2472 M480_2473 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) M480_2474 PF00394 Multicopper oxidase M480_2474 PF07731 Multicopper oxidase M480_2474 PF07732 Multicopper oxidase M480_2474 PF10518 TAT (twin-arginine translocation) pathway signal sequence M480_2475 PF00156 Phosphoribosyl transferase domain M480_2476 PF00484 Carbonic anhydrase M480_2477 PF00005 ABC transporter M480_2478 PF01061 M480_2478 M480_2480 PF01522 Polysaccharide deacetylase M480_2481 PF02261 Aspartate decarboxylase M480_2482 PF02569 Pantoate-beta-alanine ligase M480_2483 PF02548 Ketopantoate hydroxymethyltransferase M480_2484 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M480_2485 PF01743 Poly A polymerase head domain M480_2485 PF12626 Polymerase A arginine-rich C-terminus M480_2485 PF12627 Probable RNA and SrmB- binding site of polymerase A M480_2486 PF00749 tRNA synthetases class I (E and Q), catalytic domain M480_2487 PF01258 Prokaryotic dksA/traR C4-type zinc finger M480_2488 PF03749 Sugar fermentation stimulation protein M480_2489 PF02834 LigT like Phosphoesterase M480_2490 PF00270 DEAD/DEAH box helicase M480_2490 PF00271 Helicase conserved C-terminal domain M480_2490 PF04408 Helicase associated domain (HA2) M480_2490 PF08482 M480_2490 M480_2491 PF00905 Penicillin binding protein transpeptidase domain M480_2491 PF00912 Transglycosylase M480_2491 PF14812 M480_2491 M480_2491 PF14814 Bifunctional transglycosylase second domain M480_2492 PF00005 ABC transporter M480_2493 PF01497 Periplasmic binding protein M480_2494 PF01032 FecCD transport family M480_2495 PF00202 Aminotransferase class-III M480_2496 PF00654 Voltage gated chloride channel M480_2497 PF01521 Iron-sulphur cluster biosynthesis M480_2498 PF03458 M480_2498 M480_2499 PF01497 Periplasmic binding protein M480_25 PF03724 META domain M480_250 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_2500 PF01048 Phosphorylase superfamily M480_2501 PF01966 HD domain M480_2501 PF13286 Phosphohydrolase-associated domain M480_2502 PF00595 PDZ domain (Also known as DHR or GLGF) M480_2502 PF13180 PDZ domain M480_2502 PF13365 Trypsin-like peptidase domain M480_2503 PF00072 Response regulator receiver domain M480_2503 PF00512 His Kinase A (phospho-acceptor) domain M480_2503 PF01627 Hpt domain M480_2503 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2503 PF09984 M480_2503 M480_2504 PF02824 TGS domain M480_2504 PF04607 Region found in RelA / SpoT proteins M480_2504 PF13291 ACT domain M480_2504 PF13328 HD domain M480_2505 PF03819 MazG nucleotide pyrophosphohydrolase domain M480_2506 PF00117 Glutamine amidotransferase class-I M480_2506 PF06418 CTP synthase N-terminus M480_2507 PF00113 Enolase, C-terminal TIM barrel domain M480_2507 PF03952 Enolase, N-terminal domain M480_2508 PF00080 Copper/zinc superoxide dismutase (SODC) M480_2509 PF04055 Radical SAM superfamily M480_2509 PF13394 4Fe-4S single cluster domain M480_251 PF05728 Uncharacterised protein family (UPF0227) M480_2510 PF01242 6-pyruvoyl tetrahydropterin synthase M480_2511 PF00175 Oxidoreductase NAD-binding domain M480_2511 PF00258 Flavodoxin M480_2511 PF00667 FAD binding domain M480_2512 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M480_2512 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M480_2513 PF01507 Phosphoadenosine phosphosulfate reductase family M480_2514 PF01507 Phosphoadenosine phosphosulfate reductase family M480_2515 PF15919 M480_2515 M480_2516 PF07927 YcfA-like protein M480_2518 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M480_2518 PF10414 Sirohaem synthase dimerisation region M480_2518 PF13241 Putative NAD(P)-binding M480_2518 PF14824 Sirohaem biosynthesis protein central M480_2519 PF01507 Phosphoadenosine phosphosulfate reductase family M480_252 PF00933 Glycosyl hydrolase family 3 N terminal domain M480_2520 PF00009 Elongation factor Tu GTP binding domain M480_2521 PF01583 Adenylylsulphate kinase M480_2522 PF12084 M480_2522 M480_2523 PF04977 Septum formation initiator M480_2524 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M480_2525 PF02542 YgbB family M480_2526 PF01142 tRNA pseudouridine synthase D (TruD) M480_2527 PF01975 Survival protein SurE M480_2528 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) M480_2529 PF01476 LysM domain M480_2529 PF01551 Peptidase family M23 M480_253 PF01636 Phosphotransferase enzyme family M480_2530 PF00140 Sigma-70 factor, region 1 M480_2530 PF04539 Sigma-70 region 3 M480_2530 PF04542 Sigma-70 region 2 M480_2530 PF04545 Sigma-70, region 4 M480_2531 PF00488 MutS domain V M480_2531 PF01624 MutS domain I M480_2531 PF05188 MutS domain II M480_2531 PF05190 MutS family domain IV M480_2531 PF05192 MutS domain III M480_2532 PF02502 Ribose/Galactose Isomerase M480_2533 PF00107 Zinc-binding dehydrogenase M480_2533 PF08240 Alcohol dehydrogenase GroES-like domain M480_2534 PF13561 Enoyl-(Acyl carrier protein) reductase M480_2535 PF02733 Dak1 domain M480_2536 PF02734 DAK2 domain M480_2537 PF04198 Putative sugar-binding domain M480_2537 PF13518 Helix-turn-helix domain M480_2538 PF02040 M480_2538 M480_2539 PF01022 Bacterial regulatory protein, arsR family M480_254 PF13036 Protein of unknown function (DUF3897) M480_2540 PF04703 FaeA-like protein M480_2542 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_2543 PF00034 Cytochrome c M480_2543 PF03150 Di-haem cytochrome c peroxidase M480_2543 PF14376 M480_2543 M480_2545 PF00593 TonB dependent receptor M480_2545 PF07715 TonB-dependent Receptor Plug Domain M480_2546 PF07906 M480_2546 M480_2547 PF00557 Metallopeptidase family M24 M480_2548 PF11903 M480_2548 M480_2549 PF05681 M480_2549 M480_2549 PF05683 Fumarase C-terminus M480_255 PF07233 Protein of unknown function (DUF1425) M480_2550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_2550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_2551 PF01261 Xylose isomerase-like TIM barrel M480_2552 PF02653 M480_2552 M480_2553 PF02653 M480_2553 M480_2554 PF00005 ABC transporter M480_2555 PF13407 Periplasmic binding protein domain M480_2556 PF00455 M480_2556 M480_2556 PF08220 DeoR-like helix-turn-helix domain M480_2557 PF00596 Class II Aldolase and Adducin N-terminal domain M480_2558 PF00384 Molybdopterin oxidoreductase M480_2558 PF01568 Molydopterin dinucleotide binding domain M480_2558 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M480_2559 PF12800 4Fe-4S binding domain M480_2559 PF13247 4Fe-4S dicluster domain M480_256 PF01230 HIT domain M480_2560 PF04976 M480_2560 M480_2561 PF02613 Nitrate reductase delta subunit M480_2562 PF01292 Prokaryotic cytochrome b561 M480_2563 PF07361 Cytochrome b562 M480_2564 PF00141 Peroxidase M480_2565 PF13407 Periplasmic binding protein domain M480_2566 PF10054 Predicted periplasmic lipoprotein (DUF2291) M480_2567 PF00005 ABC transporter M480_2568 PF02653 M480_2568 M480_2569 PF00456 Transketolase, thiamine diphosphate binding domain M480_257 PF08501 Shikimate dehydrogenase substrate binding domain M480_2570 PF02779 Transketolase, pyrimidine binding domain M480_2570 PF02780 Transketolase, C-terminal domain M480_2571 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_2571 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_2572 PF02952 L-fucose isomerase, C-terminal domain M480_2573 PF01047 MarR family M480_2573 PF04198 Putative sugar-binding domain M480_2574 PF07690 Major Facilitator Superfamily M480_2575 PF02464 Competence-damaged protein M480_2576 PF00154 recA bacterial DNA recombination protein M480_2577 PF02631 RecX family M480_2578 PF01411 tRNA synthetases class II (A) M480_2578 PF02272 DHHA1 domain M480_2578 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M480_2579 PF02599 Global regulator protein family M480_258 PF01797 Transposase IS200 like M480_2583 PF13419 Haloacid dehalogenase-like hydrolase M480_2585 PF04262 Glutamate-cysteine ligase M480_2586 PF02664 S-Ribosylhomocysteinase (LuxS) M480_2587 PF00571 CBS domain M480_2587 PF01595 M480_2587 M480_2587 PF03471 Transporter associated domain M480_2588 PF01578 M480_2588 M480_2589 PF00448 SRP54-type protein, GTPase domain M480_2589 PF02881 SRP54-type protein, helical bundle domain M480_2589 PF02978 Signal peptide binding domain M480_259 PF00367 phosphotransferase system, EIIB M480_259 PF02378 Phosphotransferase system, EIIC M480_2590 PF00886 Ribosomal protein S16 M480_2591 PF01782 RimM N-terminal domain M480_2591 PF05239 PRC-barrel domain M480_2592 PF01746 tRNA (Guanine-1)-methyltransferase M480_2593 PF01245 Ribosomal protein L19 M480_2594 PF04338 Protein of unknown function, DUF481 M480_2595 PF03605 M480_2595 M480_2596 PF03605 M480_2596 M480_2597 PF00072 Response regulator receiver domain M480_2597 PF04397 LytTr DNA-binding domain M480_2598 PF00793 DAHP synthetase I family M480_2599 PF00665 Integrase core domain M480_2599 PF02796 Helix-turn-helix domain of resolvase M480_26 PF03891 M480_26 M480_260 PF01026 TatD related DNase M480_2600 PF01695 IstB-like ATP binding protein M480_2601 PF00793 DAHP synthetase I family M480_2602 PF01817 Chorismate mutase type II M480_2602 PF02153 Prephenate dehydrogenase M480_2603 PF00800 Prephenate dehydratase M480_2603 PF01817 Chorismate mutase type II M480_2604 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M480_2605 PF13525 Outer membrane lipoprotein M480_2606 PF00849 RNA pseudouridylate synthase M480_2606 PF01479 S4 domain M480_2607 PF02578 Multi-copper polyphenol oxidoreductase laccase M480_2608 PF00004 ATPase family associated with various cellular activities (AAA) M480_2608 PF02861 Clp amino terminal domain M480_2608 PF07724 AAA domain (Cdc48 subfamily) M480_2608 PF10431 C-terminal, D2-small domain, of ClpB protein M480_261 PF09115 DNA polymerase III, delta subunit, C terminal M480_261 PF13177 DNA polymerase III, delta subunit M480_2617 PF04204 Homoserine O-succinyltransferase M480_2618 PF01274 Malate synthase M480_2619 PF00463 Isocitrate lyase family M480_262 PF02223 Thymidylate kinase M480_2620 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M480_2621 PF01614 Bacterial transcriptional regulator M480_2621 PF09339 IclR helix-turn-helix domain M480_2622 PF00809 Pterin binding enzyme M480_2622 PF02310 B12 binding domain M480_2622 PF02574 Homocysteine S-methyltransferase M480_2622 PF02607 B12 binding domain M480_2622 PF02965 Vitamin B12 dependent methionine synthase, activation domain M480_2623 PF13332 M480_2623 M480_2624 PF05860 haemagglutination activity domain M480_2624 PF13332 M480_2624 M480_2625 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M480_2625 PF08479 POTRA domain, ShlB-type M480_2625 PF17287 M480_2625 M480_2626 PF00696 Amino acid kinase family M480_2627 PF00342 Phosphoglucose isomerase M480_2628 PF06146 M480_2628 M480_2629 PF00528 Binding-protein-dependent transport system inner membrane component M480_263 PF02618 YceG-like family M480_2630 PF00528 Binding-protein-dependent transport system inner membrane component M480_2630 PF14785 Maltose transport system permease protein MalF P2 domain M480_2631 PF13416 Bacterial extracellular solute-binding protein M480_2633 PF00005 ABC transporter M480_2633 PF08402 TOBE domain M480_2634 PF02264 LamB porin M480_2635 PF07148 M480_2635 M480_2637 PF05638 Protein of unknown function (DUF796) M480_2638 PF05591 M480_2638 M480_2639 PF05943 M480_2639 M480_264 PF01063 Aminotransferase class IV M480_2640 PF04965 Gene 25-like lysozyme M480_2641 PF00665 Integrase core domain M480_2641 PF13276 M480_2641 M480_2642 PF05947 M480_2642 M480_2643 PF13518 Helix-turn-helix domain M480_2644 PF05947 M480_2644 M480_2645 PF06996 M480_2645 M480_2647 PF12790 Type VI secretion lipoprotein M480_2648 PF05936 M480_2648 M480_2649 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M480_265 PF01797 Transposase IS200 like M480_2650 PF00004 ATPase family associated with various cellular activities (AAA) M480_2650 PF07724 AAA domain (Cdc48 subfamily) M480_2650 PF10431 C-terminal, D2-small domain, of ClpB protein M480_2651 PF02954 Bacterial regulatory protein, Fis family M480_2652 PF11319 M480_2652 M480_2653 PF06812 M480_2653 M480_2653 PF16989 M480_2653 M480_2654 PF06744 M480_2654 M480_2654 PF06761 M480_2654 M480_2654 PF14331 M480_2654 M480_2655 PF06812 M480_2655 M480_2656 PF12486 M480_2656 M480_2657 PF05954 Phage late control gene D protein (GPD) M480_2658 PF08786 Domain of unknown function (DUF1795) M480_2659 PF05488 PAAR motif M480_2659 PF05593 M480_2659 M480_266 PF00109 Beta-ketoacyl synthase, N-terminal domain M480_266 PF02801 Beta-ketoacyl synthase, C-terminal domain M480_2660 PF03527 M480_2660 M480_2660 PF14414 M480_2660 M480_2661 PF09346 SMI1 / KNR4 family (SUKH-1) M480_2663 PF08845 M480_2663 M480_2664 PF01381 Helix-turn-helix M480_2665 PF12486 M480_2665 M480_2666 PF05954 Phage late control gene D protein (GPD) M480_2667 PF08786 Domain of unknown function (DUF1795) M480_2668 PF03527 M480_2668 M480_2668 PF05488 PAAR motif M480_2668 PF05593 M480_2668 M480_267 PF00550 Phosphopantetheine attachment site M480_2670 PF01261 Xylose isomerase-like TIM barrel M480_2671 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_2672 PF02311 AraC-like ligand binding domain M480_2672 PF12833 Helix-turn-helix domain M480_2673 PF05025 RbsD / FucU transport protein family M480_2674 PF00294 pfkB family carbohydrate kinase M480_2675 PF01791 DeoC/LacD family aldolase M480_2676 PF03358 NADPH-dependent FMN reductase M480_2677 PF09084 NMT1/THI5 like M480_2678 PF00296 Luciferase-like monooxygenase M480_2679 PF00528 Binding-protein-dependent transport system inner membrane component M480_268 PF13561 Enoyl-(Acyl carrier protein) reductase M480_2680 PF00005 ABC transporter M480_2681 PF04221 RelB antitoxin M480_2682 PF00860 Permease family M480_2683 PF00999 Sodium/hydrogen exchanger family M480_2685 PF03279 M480_2685 M480_2686 PF13407 Periplasmic binding protein domain M480_2687 PF00005 ABC transporter M480_2688 PF02653 M480_2688 M480_2689 PF02653 M480_2689 M480_269 PF00698 Acyl transferase domain M480_2690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_2690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_2691 PF01380 SIS domain M480_2692 PF02798 Glutathione S-transferase, N-terminal domain M480_2692 PF13410 Glutathione S-transferase, C-terminal domain M480_2693 PF13449 Esterase-like activity of phytase M480_2695 PF01797 Transposase IS200 like M480_2696 PF00313 'Cold-shock' DNA-binding domain M480_2697 PF00313 'Cold-shock' DNA-binding domain M480_2698 PF05433 M480_2698 M480_2699 PF00753 Metallo-beta-lactamase superfamily M480_27 PF02308 M480_27 M480_270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M480_270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M480_2700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M480_2700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M480_2701 PF02627 Carboxymuconolactone decarboxylase family M480_2702 PF07690 Major Facilitator Superfamily M480_2703 PF00392 Bacterial regulatory proteins, gntR family M480_2703 PF07729 FCD domain M480_2705 PF02954 Bacterial regulatory protein, Fis family M480_2706 PF01207 Dihydrouridine synthase (Dus) M480_2707 PF06325 Ribosomal protein L11 methyltransferase (PrmA) M480_2708 PF00474 Sodium:solute symporter family M480_2709 PF06196 M480_2709 M480_271 PF02504 Fatty acid synthesis protein M480_2711 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain M480_2711 PF02785 Biotin carboxylase C-terminal domain M480_2711 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M480_2712 PF00364 Biotin-requiring enzyme M480_2713 PF01220 Dehydroquinase class II M480_2714 PF01794 M480_2714 M480_2715 PF00174 Oxidoreductase molybdopterin binding domain M480_2716 PF00107 Zinc-binding dehydrogenase M480_2716 PF08240 Alcohol dehydrogenase GroES-like domain M480_2717 PF00563 EAL domain M480_2717 PF00990 GGDEF domain M480_2717 PF17157 M480_2717 M480_2718 PF06723 MreB/Mbl protein M480_2719 PF04085 rod shape-determining protein MreC M480_272 PF01783 Ribosomal L32p protein family M480_2720 PF04093 M480_2720 M480_2721 PF02545 Maf-like protein M480_2722 PF00575 S1 RNA binding domain M480_2722 PF10150 Ribonuclease E/G family M480_2723 PF13116 M480_2723 M480_2723 PF13502 M480_2723 M480_2724 PF00795 Carbon-nitrogen hydrolase M480_2725 PF01523 Putative modulator of DNA gyrase M480_2727 PF00782 Dual specificity phosphatase, catalytic domain M480_2728 PF10828 M480_2728 M480_2729 PF13539 D-alanyl-D-alanine carboxypeptidase M480_273 PF02620 M480_273 M480_2730 PF16083 M480_2730 M480_2731 PF03534 Salmonella virulence plasmid 65kDa B protein M480_2731 PF12255 Insecticide toxin TcdB middle/C-terminal region M480_2731 PF12256 Insecticide toxin TcdB middle/N-terminal region M480_2733 PF03538 Salmonella virulence plasmid 28 M480_2734 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2735 PF03466 LysR substrate binding domain M480_2736 PF07869 M480_2736 M480_2737 PF13437 HlyD family secretion protein M480_2737 PF13533 Biotin-lipoyl like M480_2738 PF04632 M480_2738 M480_2739 PF00171 Aldehyde dehydrogenase family M480_274 PF02545 Maf-like protein M480_2740 PF00171 Aldehyde dehydrogenase family M480_2741 PF00545 ribonuclease M480_2742 PF01337 Barstar (barnase inhibitor) M480_2743 PF04751 Protein of unknown function (DUF615) M480_2744 PF01523 Putative modulator of DNA gyrase M480_2746 PF07361 Cytochrome b562 M480_2747 PF01272 Transcription elongation factor, GreA/GreB, C-term M480_2747 PF14760 Rnk N-terminus M480_2748 PF00128 Alpha amylase, catalytic domain M480_2748 PF11941 Domain of unknown function (DUF3459) M480_2749 PF00367 phosphotransferase system, EIIB M480_2749 PF02378 Phosphotransferase system, EIIC M480_275 PF00849 RNA pseudouridylate synthase M480_275 PF01479 S4 domain M480_2750 PF00356 Bacterial regulatory proteins, lacI family M480_2750 PF13377 Periplasmic binding protein-like domain M480_2751 PF16743 M480_2751 M480_2752 PF01042 Endoribonuclease L-PSP M480_2753 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M480_2753 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M480_2754 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M480_2754 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M480_2755 PF00381 PTS HPr component phosphorylation site M480_2756 PF03668 M480_2756 M480_2757 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M480_2758 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M480_2759 PF00309 M480_2759 M480_2759 PF04552 Sigma-54, DNA binding domain M480_2759 PF04963 Sigma-54 factor, core binding domain M480_276 PF00575 S1 RNA binding domain M480_276 PF10150 Ribonuclease E/G family M480_276 PF12111 Polyribonucleotide phosphorylase C terminal M480_2760 PF00005 ABC transporter M480_2760 PF12399 Branched-chain amino acid ATP-binding cassette transporter M480_2761 PF03968 OstA-like protein M480_2762 PF06835 Lipopolysaccharide-assembly, LptC-related M480_2763 PF08282 haloacid dehalogenase-like hydrolase M480_2764 PF00571 CBS domain M480_2764 PF01380 SIS domain M480_2765 PF01699 Sodium/calcium exchanger protein M480_2766 PF00005 ABC transporter M480_2767 PF02405 M480_2767 M480_2768 PF02470 M480_2768 M480_2769 PF05494 Toluene tolerance, Ttg2 M480_277 PF03992 Antibiotic biosynthesis monooxygenase M480_2770 PF13466 STAS domain M480_2771 PF01722 BolA-like protein M480_2772 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M480_2773 PF13180 PDZ domain M480_2773 PF13365 Trypsin-like peptidase domain M480_2774 PF01797 Transposase IS200 like M480_2775 PF00595 PDZ domain (Also known as DHR or GLGF) M480_2775 PF13180 PDZ domain M480_2775 PF13365 Trypsin-like peptidase domain M480_2776 PF06295 M480_2776 M480_2777 PF03969 AFG1-like ATPase M480_2778 PF00572 Ribosomal protein L13 M480_2779 PF00380 Ribosomal protein S9/S16 M480_278 PF01979 Amidohydrolase family M480_2780 PF00043 Glutathione S-transferase, C-terminal domain M480_2780 PF02798 Glutathione S-transferase, N-terminal domain M480_2781 PF04386 Stringent starvation protein B M480_2783 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_2783 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M480_2784 PF00310 Glutamine amidotransferases class-II M480_2784 PF01493 GXGXG motif M480_2784 PF01645 Conserved region in glutamate synthase M480_2784 PF04898 Glutamate synthase central domain M480_2785 PF04055 Radical SAM superfamily M480_2785 PF16199 M480_2785 M480_2786 PF00072 Response regulator receiver domain M480_2786 PF00512 His Kinase A (phospho-acceptor) domain M480_2786 PF00989 PAS fold M480_2786 PF01627 Hpt domain M480_2786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2788 PF00912 Transglycosylase M480_2789 PF04972 BON domain M480_279 PF06183 DinI-like family M480_2790 PF13580 SIS domain M480_2791 PF02021 Uncharacterised protein family UPF0102 M480_2792 PF04348 LppC putative lipoprotein M480_2793 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M480_2794 PF02678 Pirin M480_2795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2795 PF03466 LysR substrate binding domain M480_2796 PF13409 Glutathione S-transferase, N-terminal domain M480_2796 PF13410 Glutathione S-transferase, C-terminal domain M480_2797 PF07681 M480_2797 M480_2798 PF13997 M480_2798 M480_2799 PF07332 M480_2799 M480_28 PF00893 Small Multidrug Resistance protein M480_280 PF00872 M480_280 M480_2800 PF05957 M480_2800 M480_2801 PF06476 M480_2801 M480_2802 PF13721 SecD export protein N-terminal TM region M480_2803 PF09335 M480_2803 M480_2805 PF00392 Bacterial regulatory proteins, gntR family M480_2805 PF07729 FCD domain M480_2806 PF07690 Major Facilitator Superfamily M480_2807 PF07690 Major Facilitator Superfamily M480_2808 PF02614 Glucuronate isomerase M480_2809 PF01232 Mannitol dehydrogenase Rossmann domain M480_2809 PF08125 Mannitol dehydrogenase C-terminal domain M480_281 PF13991 M480_281 M480_2810 PF04295 M480_2810 M480_2810 PF08666 SAF domain M480_2811 PF10688 M480_2811 M480_2812 PF01797 Transposase IS200 like M480_2814 PF00375 Sodium:dicarboxylate symporter family M480_2815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_2816 PF01863 Protein of unknown function DUF45 M480_2817 PF03212 Pertactin M480_2817 PF03797 Autotransporter beta-domain M480_2818 PF05175 Methyltransferase small domain M480_2819 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M480_2819 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_282 PF01266 FAD dependent oxidoreductase M480_2820 PF03729 M480_2820 M480_2821 PF00069 Protein kinase domain M480_2822 PF13672 Protein phosphatase 2C M480_2823 PF00092 von Willebrand factor type A domain M480_2823 PF15616 M480_2823 M480_2824 PF00092 von Willebrand factor type A domain M480_2825 PF02342 TerD domain M480_2826 PF00092 von Willebrand factor type A domain M480_2827 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M480_2827 PF08479 POTRA domain, ShlB-type M480_2827 PF17287 M480_2827 M480_2828 PF04829 M480_2828 M480_2828 PF05860 haemagglutination activity domain M480_2828 PF13018 M480_2828 M480_2828 PF13332 M480_2828 M480_283 PF00196 Bacterial regulatory proteins, luxR family M480_2831 PF15599 M480_2831 M480_2833 PF03797 Autotransporter beta-domain M480_2834 PF13557 M480_2834 M480_2835 PF10091 Putative glucoamylase M480_2836 PF00005 ABC transporter M480_2836 PF08402 TOBE domain M480_2838 PF00356 Bacterial regulatory proteins, lacI family M480_2838 PF13377 Periplasmic binding protein-like domain M480_2839 PF01547 Bacterial extracellular solute-binding protein M480_284 PF01594 M480_284 M480_2840 PF00528 Binding-protein-dependent transport system inner membrane component M480_2841 PF00528 Binding-protein-dependent transport system inner membrane component M480_2843 PF00933 Glycosyl hydrolase family 3 N terminal domain M480_2843 PF01915 Glycosyl hydrolase family 3 C-terminal domain M480_2843 PF14310 Fibronectin type III-like domain M480_2844 PF02321 Outer membrane efflux protein M480_2845 PF04632 M480_2845 M480_2846 PF13437 HlyD family secretion protein M480_2846 PF13533 Biotin-lipoyl like M480_2847 PF17090 M480_2847 M480_2849 PF00155 Aminotransferase class I and II M480_285 PF00581 Rhodanese-like domain M480_285 PF12368 M480_285 M480_2850 PF03553 M480_2850 M480_2851 PF10604 Polyketide cyclase / dehydrase and lipid transport M480_2852 PF08348 M480_2852 M480_2853 PF01042 Endoribonuclease L-PSP M480_2854 PF01042 Endoribonuclease L-PSP M480_2855 PF08803 Putative mono-oxygenase ydhR M480_2857 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2857 PF03466 LysR substrate binding domain M480_2858 PF01695 IstB-like ATP binding protein M480_2859 PF00665 Integrase core domain M480_2859 PF02796 Helix-turn-helix domain of resolvase M480_2862 PF02661 Fic/DOC family M480_2867 PF03592 Terminase small subunit M480_287 PF00892 EamA-like transporter family M480_2870 PF00140 Sigma-70 factor, region 1 M480_2870 PF03979 Sigma-70 factor, region 1 M480_2870 PF04539 Sigma-70 region 3 M480_2870 PF04542 Sigma-70 region 2 M480_2870 PF04545 Sigma-70, region 4 M480_2870 PF04546 Sigma-70, non-essential region M480_2871 PF01807 CHC2 zinc finger M480_2871 PF08275 DNA primase catalytic core, N-terminal domain M480_2871 PF08278 DNA primase DnaG DnaB-binding M480_2871 PF10410 DnaB-helicase binding domain of primase M480_2871 PF13155 Toprim-like M480_2872 PF01165 Ribosomal protein S21 M480_2873 PF00814 Glycoprotease family M480_2874 PF02660 M480_2874 M480_2875 PF02152 Dihydroneopterin aldolase M480_2876 PF02673 M480_2876 M480_2877 PF01743 Poly A polymerase head domain M480_2877 PF01966 HD domain M480_2877 PF12627 Probable RNA and SrmB- binding site of polymerase A M480_2878 PF08239 Bacterial SH3 domain M480_2879 PF01928 CYTH domain M480_288 PF00196 Bacterial regulatory proteins, luxR family M480_288 PF03472 Autoinducer binding domain M480_2880 PF03710 Glutamate-ammonia ligase adenylyltransferase M480_2880 PF08335 GlnD PII-uridylyltransferase M480_2881 PF00294 pfkB family carbohydrate kinase M480_2881 PF01467 Cytidylyltransferase M480_2882 PF13520 Amino acid permease M480_2883 PF04380 M480_2883 M480_2885 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M480_2886 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M480_2887 PF03738 Glutathionylspermidine synthase preATP-grasp M480_2888 PF06693 M480_2888 M480_289 PF00765 Autoinducer synthetase M480_2890 PF02321 Outer membrane efflux protein M480_2891 PF00293 NUDIX domain M480_2892 PF06853 M480_2892 M480_2893 PF00149 Calcineurin-like phosphoesterase M480_2894 PF05728 Uncharacterised protein family (UPF0227) M480_2895 PF00204 DNA gyrase B M480_2895 PF00986 DNA gyrase B subunit, carboxyl terminus M480_2895 PF01751 Toprim domain M480_2895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_2896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_2896 PF03466 LysR substrate binding domain M480_2897 PF02525 Flavodoxin-like fold M480_2898 PF00521 DNA gyrase/topoisomerase IV, subunit A M480_2898 PF03989 DNA gyrase C-terminal domain, beta-propeller M480_2899 PF01553 Acyltransferase M480_29 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase M480_29 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg M480_29 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M480_29 PF10371 Domain of unknown function M480_29 PF12838 4Fe-4S dicluster domain M480_29 PF17147 M480_29 M480_290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_290 PF03466 LysR substrate binding domain M480_2900 PF07731 Multicopper oxidase M480_2900 PF07732 Multicopper oxidase M480_2901 PF04055 Radical SAM superfamily M480_2901 PF08497 M480_2901 M480_2902 PF11842 M480_2902 M480_2903 PF00248 Aldo/keto reductase family M480_2904 PF00465 Iron-containing alcohol dehydrogenase M480_2905 PF06719 M480_2905 M480_2905 PF12833 Helix-turn-helix domain M480_2906 PF09335 M480_2906 M480_2907 PF01053 Cys/Met metabolism PLP-dependent enzyme M480_2908 PF01618 M480_2908 M480_2910 PF02472 Biopolymer transport protein ExbD/TolR M480_2912 PF16964 M480_2912 M480_2913 PF07811 M480_2913 M480_2915 PF00482 Type II secretion system (T2SS), protein F M480_2916 PF00482 Type II secretion system (T2SS), protein F M480_2917 PF00437 Type II/IV secretion system protein M480_292 PF00083 Sugar (and other) transporter M480_2920 PF00263 M480_2920 M480_2921 PF13629 M480_2921 M480_2923 PF01478 Type IV leader peptidase family M480_2924 PF01797 Transposase IS200 like M480_2925 PF00577 Outer membrane usher protein M480_2925 PF13953 PapC C-terminal domain M480_2925 PF13954 PapC N-terminal domain M480_2926 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_2926 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_2928 PF00419 Fimbrial protein M480_2929 PF01497 Periplasmic binding protein M480_293 PF08714 Formaldehyde-activating enzyme (Fae) M480_2931 PF11153 M480_2931 M480_2932 PF00771 FHIPEP family M480_2933 PF01312 FlhB HrpN YscU SpaS Family M480_2934 PF01311 M480_2934 M480_2935 PF01313 M480_2935 M480_2936 PF00813 M480_2936 M480_2937 PF01052 Surface presentation of antigens (SPOA) M480_2938 PF01052 Surface presentation of antigens (SPOA) M480_2939 PF00158 Sigma-54 interaction domain M480_2939 PF02954 Bacterial regulatory protein, Fis family M480_294 PF00248 Aldo/keto reductase family M480_2940 PF02049 M480_2940 M480_2941 PF01514 Secretory protein of YscJ/FliF family M480_2941 PF08345 M480_2941 M480_2942 PF01706 FliG C-terminal domain M480_2942 PF14841 FliG middle domain M480_2942 PF14842 FliG N-terminal domain M480_2943 PF02108 M480_2943 M480_2943 PF09811 M480_2943 M480_2944 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M480_2945 PF02050 Flagellar FliJ protein M480_2946 PF05130 FlgN protein M480_2947 PF04316 Anti-sigma-28 factor, FlgM M480_2948 PF13144 SAF-like M480_2949 PF00460 Flagella basal body rod protein M480_295 PF09618 CRISPR-associated protein (Cas_Csy4) M480_2950 PF00460 Flagella basal body rod protein M480_2950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_2951 PF03963 M480_2951 M480_2951 PF13860 FlgD Ig-like domain M480_2951 PF13861 FlgD Tudor-like domain M480_2952 PF00460 Flagella basal body rod protein M480_2952 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_2952 PF07559 Flagellar basal body protein FlaE M480_2953 PF00460 Flagella basal body rod protein M480_2953 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_2954 PF00460 Flagella basal body rod protein M480_2954 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_2955 PF02107 M480_2955 M480_2956 PF02119 M480_2956 M480_2957 PF10135 M480_2957 M480_2958 PF00460 Flagella basal body rod protein M480_2958 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_2959 PF00669 Bacterial flagellin N-terminal helical region M480_296 PF09615 M480_296 M480_2962 PF00486 Transcriptional regulatory protein, C terminal M480_2963 PF00669 Bacterial flagellin N-terminal helical region M480_2963 PF00700 Bacterial flagellin C-terminal helical region M480_2964 PF00669 Bacterial flagellin N-terminal helical region M480_2964 PF00700 Bacterial flagellin C-terminal helical region M480_2965 PF00669 Bacterial flagellin N-terminal helical region M480_2965 PF00700 Bacterial flagellin C-terminal helical region M480_2966 PF00669 Bacterial flagellin N-terminal helical region M480_2966 PF00700 Bacterial flagellin C-terminal helical region M480_2967 PF02465 M480_2967 M480_2967 PF07195 M480_2967 M480_2967 PF07196 Flagellin hook IN motif M480_2968 PF02561 Flagellar protein FliS M480_297 PF09614 M480_297 M480_2970 PF02120 Flagellar hook-length control protein FliK M480_2971 PF03748 M480_2971 M480_2972 PF04539 Sigma-70 region 3 M480_2972 PF04542 Sigma-70 region 2 M480_2972 PF04545 Sigma-70, region 4 M480_2973 PF01618 M480_2973 M480_2974 PF00691 OmpA family M480_2974 PF13677 M480_2974 M480_2977 PF05656 M480_2977 M480_2978 PF05433 M480_2978 M480_2979 PF13518 Helix-turn-helix domain M480_298 PF09611 M480_298 M480_2981 PF00665 Integrase core domain M480_2981 PF13276 M480_2981 M480_2982 PF13347 MFS/sugar transport protein M480_2983 PF00593 TonB dependent receptor M480_2983 PF07715 TonB-dependent Receptor Plug Domain M480_2984 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M480_2985 PF04183 IucA / IucC family M480_2985 PF06276 Ferric iron reductase FhuF-like transporter M480_2986 PF13523 Acetyltransferase (GNAT) domain M480_2987 PF04183 IucA / IucC family M480_2987 PF06276 Ferric iron reductase FhuF-like transporter M480_2988 PF04183 IucA / IucC family M480_2989 PF07690 Major Facilitator Superfamily M480_2990 PF00775 Dioxygenase M480_2991 PF10503 Esterase PHB depolymerase M480_2992 PF00765 Autoinducer synthetase M480_2993 PF00196 Bacterial regulatory proteins, luxR family M480_2993 PF03472 Autoinducer binding domain M480_2995 PF02517 CAAX protease self-immunity M480_2997 PF03811 M480_2997 M480_2997 PF12759 M480_2997 M480_3 PF13520 Amino acid permease M480_30 PF01171 PP-loop family M480_300 PF01867 CRISPR associated protein Cas1 M480_3000 PF05591 M480_3000 M480_3001 PF05943 M480_3001 M480_3002 PF05936 M480_3002 M480_3003 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M480_3004 PF00691 OmpA family M480_3005 PF05638 Protein of unknown function (DUF796) M480_3006 PF00004 ATPase family associated with various cellular activities (AAA) M480_3006 PF07724 AAA domain (Cdc48 subfamily) M480_3006 PF10431 C-terminal, D2-small domain, of ClpB protein M480_3007 PF05954 Phage late control gene D protein (GPD) M480_3007 PF10106 M480_3007 M480_3007 PF13296 M480_3007 M480_3008 PF01551 Peptidase family M23 M480_301 PF00924 Mechanosensitive ion channel M480_3010 PF03811 M480_3010 M480_3010 PF12759 M480_3010 M480_3011 PF03400 M480_3011 M480_3012 PF10106 M480_3012 M480_3013 PF00589 Phage integrase family M480_3015 PF01276 Orn/Lys/Arg decarboxylase, major domain M480_3015 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M480_3015 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M480_3016 PF13407 Periplasmic binding protein domain M480_3017 PF00005 ABC transporter M480_3018 PF02653 M480_3018 M480_3019 PF00593 TonB dependent receptor M480_3019 PF07715 TonB-dependent Receptor Plug Domain M480_3020 PF01497 Periplasmic binding protein M480_3021 PF01464 Transglycosylase SLT domain M480_3021 PF11873 Domain of unknown function (DUF3393) M480_3022 PF04362 Bacterial Fe(2+) trafficking M480_3023 PF00633 Helix-hairpin-helix motif M480_3023 PF00730 HhH-GPD superfamily base excision DNA repair protein M480_3023 PF10576 Iron-sulfur binding domain of endonuclease III M480_3023 PF14815 NUDIX domain M480_3024 PF02390 Putative methyltransferase M480_3025 PF04320 M480_3025 M480_3026 PF04960 Glutaminase M480_3027 PF11101 M480_3027 M480_3028 PF11101 M480_3028 M480_3029 PF11713 Peptidase C80 family M480_3030 PF04055 Radical SAM superfamily M480_3030 PF06969 HemN C-terminal domain M480_3031 PF01725 Ham1 family M480_3032 PF02594 Uncharacterised ACR, YggU family COG1872 M480_3033 PF02325 M480_3033 M480_3034 PF03807 NADP oxidoreductase coenzyme F420-dependent M480_3034 PF14748 Pyrroline-5-carboxylate reductase dimerisation M480_3035 PF01168 Alanine racemase, N-terminal domain M480_3036 PF00437 Type II/IV secretion system protein M480_3037 PF04371 Porphyromonas-type peptidyl-arginine deiminase M480_3038 PF00795 Carbon-nitrogen hydrolase M480_3039 PF03652 Uncharacterised protein family (UPF0081) M480_304 PF08950 Protein of unknown function (DUF1861) M480_3040 PF02622 Uncharacterized ACR, COG1678 M480_3041 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M480_3041 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M480_3042 PF04452 RNA methyltransferase M480_3043 PF04231 Endonuclease I M480_3044 PF10263 M480_3044 M480_3044 PF17283 M480_3044 M480_3045 PF00438 S-adenosylmethionine synthetase, N-terminal domain M480_3045 PF02772 S-adenosylmethionine synthetase, central domain M480_3045 PF02773 S-adenosylmethionine synthetase, C-terminal domain M480_3047 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M480_3048 PF00355 Rieske [2Fe-2S] domain M480_3049 PF01435 Peptidase family M48 M480_305 PF04041 Domain of unknown function (DUF377) M480_3050 PF00456 Transketolase, thiamine diphosphate binding domain M480_3050 PF02779 Transketolase, pyrimidine binding domain M480_3050 PF02780 Transketolase, C-terminal domain M480_3051 PF01797 Transposase IS200 like M480_3052 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M480_3052 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M480_3053 PF00162 Phosphoglycerate kinase M480_3054 PF01116 Fructose-bisphosphate aldolase class-II M480_3055 PF00924 Mechanosensitive ion channel M480_3055 PF05552 Conserved TM helix M480_3056 PF01810 M480_3056 M480_3057 PF04402 Protein of unknown function (DUF541) M480_3058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3058 PF03466 LysR substrate binding domain M480_3059 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M480_306 PF00528 Binding-protein-dependent transport system inner membrane component M480_3060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M480_3060 PF01842 ACT domain M480_3060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M480_3061 PF01797 Transposase IS200 like M480_3062 PF01812 5-formyltetrahydrofolate cyclo-ligase family M480_3063 PF05164 Cell division protein ZapA M480_3064 PF03695 Uncharacterised protein family (UPF0149) M480_3065 PF00557 Metallopeptidase family M24 M480_3065 PF05195 Aminopeptidase P, N-terminal domain M480_3066 PF01494 FAD binding domain M480_3067 PF01494 FAD binding domain M480_3068 PF01571 Aminomethyltransferase folate-binding domain M480_3068 PF08669 Glycine cleavage T-protein C-terminal barrel domain M480_3069 PF01597 Glycine cleavage H-protein M480_307 PF00528 Binding-protein-dependent transport system inner membrane component M480_3070 PF02347 Glycine cleavage system P-protein M480_3071 PF13924 M480_3071 M480_3073 PF03895 YadA-like C-terminal region M480_3073 PF05658 Head domain of trimeric autotransporter adhesin M480_3073 PF05662 Coiled stalk of trimeric autotransporter adhesin M480_3075 PF03006 M480_3075 M480_3076 PF09933 M480_3076 M480_3077 PF01571 Aminomethyltransferase folate-binding domain M480_3078 PF03937 Flavinator of succinate dehydrogenase M480_3079 PF00072 Response regulator receiver domain M480_3079 PF00486 Transcriptional regulatory protein, C terminal M480_308 PF13416 Bacterial extracellular solute-binding protein M480_3080 PF00512 His Kinase A (phospho-acceptor) domain M480_3080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_3080 PF14827 Sensory domain of two-component sensor kinase M480_3081 PF06123 M480_3081 M480_3082 PF00258 Flavodoxin M480_3083 PF00589 Phage integrase family M480_3083 PF02899 Phage integrase, N-terminal SAM-like domain M480_3084 PF10411 Disulfide bond isomerase protein N-terminus M480_3084 PF13098 Thioredoxin-like domain M480_3085 PF01368 DHH family M480_3085 PF02272 DHHA1 domain M480_3086 PF00472 RF-1 domain M480_3086 PF03462 PCRF domain M480_3087 PF00152 tRNA synthetases class II (D, K and N) M480_3087 PF01336 OB-fold nucleic acid binding domain M480_3089 PF00589 Phage integrase family M480_3089 PF13356 Domain of unknown function (DUF4102) M480_309 PF00356 Bacterial regulatory proteins, lacI family M480_309 PF13377 Periplasmic binding protein-like domain M480_3091 PF05016 Plasmid stabilisation system protein M480_3092 PF01381 Helix-turn-helix M480_3093 PF15723 M480_3093 M480_3094 PF15731 M480_3094 M480_3095 PF03288 Poxvirus D5 protein-like M480_3095 PF08273 Zinc-binding domain of primase-helicase M480_3095 PF08706 M480_3095 M480_3095 PF13362 Toprim domain M480_3096 PF05973 M480_3096 M480_3097 PF05930 Prophage CP4-57 regulatory protein (AlpA) M480_310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M480_310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M480_310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M480_310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M480_3101 PF02661 Fic/DOC family M480_3102 PF05488 PAAR motif M480_3102 PF06958 S-type Pyocin M480_3103 PF14206 M480_3103 M480_3105 PF09204 Bacterial self-protective colicin-like immunity M480_3107 PF11340 M480_3107 M480_3109 PF05488 PAAR motif M480_311 PF00005 ABC transporter M480_311 PF08402 TOBE domain M480_3110 PF12977 Domain of Unknown Function with PDB structure (DUF3861) M480_3111 PF03551 Transcriptional regulator PadR-like family M480_3112 PF05708 Orthopoxvirus protein of unknown function (DUF830) M480_3114 PF13407 Periplasmic binding protein domain M480_3115 PF02653 M480_3115 M480_3116 PF00005 ABC transporter M480_3117 PF00005 ABC transporter M480_3117 PF08402 TOBE domain M480_3118 PF13416 Bacterial extracellular solute-binding protein M480_3119 PF00528 Binding-protein-dependent transport system inner membrane component M480_312 PF00872 M480_312 M480_3120 PF00528 Binding-protein-dependent transport system inner membrane component M480_3121 PF07745 Glycosyl hydrolase family 53 M480_3122 PF02449 Beta-galactosidase M480_3123 PF02449 Beta-galactosidase M480_3123 PF08532 Beta-galactosidase trimerisation domain M480_3123 PF08533 Beta-galactosidase C-terminal domain M480_3124 PF00367 phosphotransferase system, EIIB M480_3125 PF02264 LamB porin M480_3126 PF00356 Bacterial regulatory proteins, lacI family M480_3126 PF13377 Periplasmic binding protein-like domain M480_3127 PF01055 Glycosyl hydrolases family 31 M480_3127 PF13802 Galactose mutarotase-like M480_3127 PF17137 M480_3127 M480_3128 PF07690 Major Facilitator Superfamily M480_3129 PF00356 Bacterial regulatory proteins, lacI family M480_3129 PF13377 Periplasmic binding protein-like domain M480_3130 PF01965 DJ-1/PfpI family M480_3132 PF01116 Fructose-bisphosphate aldolase class-II M480_3133 PF10022 M480_3133 M480_3134 PF00884 Sulfatase M480_3135 PF04055 Radical SAM superfamily M480_3135 PF13186 Iron-sulfur cluster-binding domain M480_3136 PF07470 Glycosyl Hydrolase Family 88 M480_3137 PF13561 Enoyl-(Acyl carrier protein) reductase M480_3138 PF01979 Amidohydrolase family M480_3139 PF03610 PTS system fructose IIA component M480_3140 PF03613 M480_3140 M480_3141 PF03609 M480_3141 M480_3142 PF03830 PTS system sorbose subfamily IIB component M480_3143 PF01380 SIS domain M480_3144 PF08013 Tagatose 6 phosphate kinase M480_3145 PF00455 M480_3145 M480_3145 PF08220 DeoR-like helix-turn-helix domain M480_3146 PF00884 Sulfatase M480_3147 PF01797 Transposase IS200 like M480_3148 PF00665 Integrase core domain M480_3148 PF02796 Helix-turn-helix domain of resolvase M480_3149 PF01695 IstB-like ATP binding protein M480_315 PF14106 M480_315 M480_3150 PF02278 Polysaccharide lyase family 8, super-sandwich domain M480_3150 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M480_3150 PF09092 Lyase, N terminal M480_3150 PF09093 Lyase, catalytic M480_3151 PF03797 Autotransporter beta-domain M480_3152 PF16946 M480_3152 M480_3154 PF00484 Carbonic anhydrase M480_3156 PF11356 Type IV pilus biogenesis M480_3157 PF00263 M480_3157 M480_3157 PF03958 Bacterial type II/III secretion system short domain M480_3158 PF00437 Type II/IV secretion system protein M480_3160 PF00482 Type II secretion system (T2SS), protein F M480_3161 PF07963 Prokaryotic N-terminal methylation motif M480_3161 PF08334 Type II secretion system (T2SS), protein G M480_3162 PF07963 Prokaryotic N-terminal methylation motif M480_3163 PF02501 Type II secretion system (T2SS), protein I M480_3164 PF07963 Prokaryotic N-terminal methylation motif M480_3164 PF11612 Type II secretion system (T2SS), protein J M480_3165 PF03934 Type II secretion system (T2SS), protein K M480_3166 PF05134 Type II secretion system (T2SS), protein L M480_3166 PF12693 GspL periplasmic domain M480_3168 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) M480_3169 PF01478 Type IV leader peptidase family M480_3169 PF06750 M480_3169 M480_3170 PF00486 Transcriptional regulatory protein, C terminal M480_3171 PF00872 M480_3171 M480_3174 PF01323 DSBA-like thioredoxin domain M480_3175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_3175 PF02203 Tar ligand binding domain homologue M480_3176 PF00753 Metallo-beta-lactamase superfamily M480_3177 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3177 PF03466 LysR substrate binding domain M480_3178 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3178 PF03466 LysR substrate binding domain M480_3179 PF07690 Major Facilitator Superfamily M480_318 PF04829 M480_318 M480_3180 PF00356 Bacterial regulatory proteins, lacI family M480_3180 PF13377 Periplasmic binding protein-like domain M480_3181 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M480_3181 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M480_3182 PF00384 Molybdopterin oxidoreductase M480_3182 PF01568 Molydopterin dinucleotide binding domain M480_3183 PF00501 AMP-binding enzyme M480_3183 PF01553 Acyltransferase M480_3183 PF13193 AMP-binding enzyme C-terminal domain M480_3184 PF07690 Major Facilitator Superfamily M480_3187 PF00248 Aldo/keto reductase family M480_3188 PF02976 DNA mismatch repair enzyme MutH M480_3189 PF00293 NUDIX domain M480_3190 PF00391 PEP-utilising enzyme, mobile domain M480_3190 PF01590 GAF domain M480_3190 PF02896 PEP-utilising enzyme, TIM barrel domain M480_3190 PF05524 PEP-utilising enzyme, N-terminal M480_3191 PF01790 M480_3191 M480_3192 PF00303 Thymidylate synthase M480_3194 PF07963 Prokaryotic N-terminal methylation motif M480_3196 PF10713 M480_3196 M480_3197 PF07963 Prokaryotic N-terminal methylation motif M480_3197 PF12528 M480_3197 M480_3198 PF04257 Exodeoxyribonuclease V, gamma subunit M480_3199 PF00675 Insulinase (Peptidase family M16) M480_3199 PF05193 Peptidase M16 inactive domain M480_3199 PF16187 M480_3199 M480_32 PF07859 alpha/beta hydrolase fold M480_320 PF10004 M480_320 M480_3200 PF00580 UvrD/REP helicase N-terminal domain M480_3200 PF13361 UvrD-like helicase C-terminal domain M480_3201 PF13538 UvrD-like helicase C-terminal domain M480_3201 PF13604 AAA domain M480_3202 PF00583 Acetyltransferase (GNAT) family M480_3202 PF00696 Amino acid kinase family M480_3203 PF01695 IstB-like ATP binding protein M480_3204 PF01695 IstB-like ATP binding protein M480_3205 PF00665 Integrase core domain M480_3205 PF02796 Helix-turn-helix domain of resolvase M480_3207 PF01520 N-acetylmuramoyl-L-alanine amidase M480_3207 PF11741 AMIN domain M480_321 PF04829 M480_321 M480_321 PF05594 M480_321 M480_321 PF05860 haemagglutination activity domain M480_321 PF13018 M480_321 M480_321 PF13332 M480_321 M480_3211 PF03562 MltA specific insert domain M480_3211 PF06725 3D domain M480_3212 PF00899 ThiF family M480_3213 PF02657 Fe-S metabolism associated domain M480_3214 PF00266 Aminotransferase class-V M480_3215 PF06004 Bacterial protein of unknown function (DUF903) M480_3216 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3216 PF03466 LysR substrate binding domain M480_3217 PF04241 M480_3217 M480_3218 PF01728 FtsJ-like methyltransferase M480_3219 PF01367 5'-3' exonuclease, C-terminal SAM fold M480_3219 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M480_322 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M480_322 PF08479 POTRA domain, ShlB-type M480_322 PF17287 M480_322 M480_3220 PF03641 Possible lysine decarboxylase M480_3220 PF11892 Domain of unknown function (DUF3412) M480_3220 PF14793 Domain of unknown function (DUF4478) M480_3221 PF14489 QueF-like protein M480_3221 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M480_3222 PF07348 Syd protein (SUKH-2) M480_3223 PF01797 Transposase IS200 like M480_3224 PF04287 tRNA pseudouridine synthase C M480_3225 PF00849 RNA pseudouridylate synthase M480_3226 PF00258 Flavodoxin M480_3227 PF11944 M480_3227 M480_3228 PF00132 Bacterial transferase hexapeptide (six repeats) M480_3228 PF14602 Hexapeptide repeat of succinyl-transferase M480_3228 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M480_3229 PF01842 ACT domain M480_3229 PF01909 Nucleotidyltransferase domain M480_3229 PF01966 HD domain M480_3229 PF08335 GlnD PII-uridylyltransferase M480_323 PF00111 2Fe-2S iron-sulfur cluster binding domain M480_323 PF00175 Oxidoreductase NAD-binding domain M480_323 PF00970 Oxidoreductase FAD-binding domain M480_3230 PF00557 Metallopeptidase family M24 M480_3231 PF00318 Ribosomal protein S2 M480_3232 PF00889 Elongation factor TS M480_3233 PF00696 Amino acid kinase family M480_3234 PF01765 Ribosome recycling factor M480_3235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M480_3235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal M480_3235 PF13288 DXP reductoisomerase C-terminal domain M480_3236 PF01255 Putative undecaprenyl diphosphate synthase M480_3237 PF01148 Cytidylyltransferase family M480_3238 PF00595 PDZ domain (Also known as DHR or GLGF) M480_3238 PF02163 Peptidase family M50 M480_3239 PF01103 Surface antigen M480_3239 PF07244 Surface antigen variable number repeat M480_324 PF00355 Rieske [2Fe-2S] domain M480_324 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M480_3240 PF03938 Outer membrane protein (OmpH-like) M480_3241 PF00132 Bacterial transferase hexapeptide (six repeats) M480_3241 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M480_3242 PF07977 FabA-like domain M480_3243 PF00132 Bacterial transferase hexapeptide (six repeats) M480_3243 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M480_3244 PF02684 M480_3244 M480_3245 PF01351 Ribonuclease HII M480_3246 PF01336 OB-fold nucleic acid binding domain M480_3246 PF02811 PHP domain M480_3246 PF07733 Bacterial DNA polymerase III alpha subunit M480_3246 PF14579 Helix-hairpin-helix motif M480_3247 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M480_3248 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M480_3249 PF01171 PP-loop family M480_3249 PF09179 TilS substrate binding domain M480_3249 PF11734 TilS substrate C-terminal domain M480_325 PF02028 BCCT family transporter M480_3250 PF00034 Cytochrome c M480_3251 PF07073 Modulator of Rho-dependent transcription termination (ROF) M480_3252 PF06786 M480_3252 M480_3253 PF07152 YaeQ protein M480_3254 PF00472 RF-1 domain M480_3255 PF04170 NlpE N-terminal domain M480_3255 PF17185 M480_3255 M480_3256 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M480_3256 PF03129 Anticodon binding domain M480_3256 PF04073 Aminoacyl-tRNA editing domain M480_3257 PF01980 Uncharacterised protein family UPF0066 M480_3258 PF16358 M480_3258 M480_3259 PF03180 NLPA lipoprotein M480_326 PF00180 Isocitrate/isopropylmalate dehydrogenase M480_3260 PF00528 Binding-protein-dependent transport system inner membrane component M480_3261 PF00005 ABC transporter M480_3261 PF09383 NIL domain M480_3262 PF13242 HAD-hyrolase-like M480_3268 PF00248 Aldo/keto reductase family M480_327 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_327 PF03466 LysR substrate binding domain M480_3270 PF03372 Endonuclease/Exonuclease/phosphatase family M480_3271 PF01464 Transglycosylase SLT domain M480_3271 PF01476 LysM domain M480_3272 PF00753 Metallo-beta-lactamase superfamily M480_3272 PF16123 M480_3272 M480_3273 PF08241 Methyltransferase domain M480_3274 PF00075 RNase H M480_3275 PF00929 Exonuclease M480_3277 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M480_3278 PF01522 Polysaccharide deacetylase M480_3279 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M480_328 PF00356 Bacterial regulatory proteins, lacI family M480_328 PF13407 Periplasmic binding protein domain M480_3280 PF00528 Binding-protein-dependent transport system inner membrane component M480_3281 PF00005 ABC transporter M480_3281 PF00571 CBS domain M480_3282 PF00268 Ribonucleotide reductase, small chain M480_3283 PF00317 Ribonucleotide reductase, all-alpha domain M480_3283 PF02867 Ribonucleotide reductase, barrel domain M480_3283 PF08343 Ribonucleotide reductase N-terminal M480_3284 PF07972 NrdI Flavodoxin like M480_3285 PF00462 Glutaredoxin M480_3286 PF06392 M480_3286 M480_3287 PF09400 Protein of unknown function (DUF2002) M480_3288 PF06711 M480_3288 M480_3289 PF04899 M480_3289 M480_329 PF02653 M480_329 M480_3290 PF00313 'Cold-shock' DNA-binding domain M480_3291 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_3292 PF00528 Binding-protein-dependent transport system inner membrane component M480_3293 PF00528 Binding-protein-dependent transport system inner membrane component M480_3294 PF00005 ABC transporter M480_3295 PF00005 ABC transporter M480_3297 PF00547 Urease, gamma subunit M480_3298 PF00699 Urease beta subunit M480_3299 PF00449 Urease alpha-subunit, N-terminal domain M480_3299 PF01979 Amidohydrolase family M480_33 PF13411 MerR HTH family regulatory protein M480_330 PF00005 ABC transporter M480_3300 PF02814 UreE urease accessory protein, N-terminal domain M480_3300 PF05194 UreE urease accessory protein, C-terminal domain M480_3301 PF01730 UreF M480_3302 PF02492 CobW/HypB/UreG, nucleotide-binding domain M480_3303 PF01774 UreD urease accessory protein M480_3304 PF03253 Urea transporter M480_3305 PF03824 M480_3305 M480_3306 PF06411 HdeA/HdeB family M480_3307 PF02254 TrkA-N domain M480_3307 PF07885 Ion channel M480_3308 PF02537 M480_3308 M480_3309 PF02537 M480_3309 M480_331 PF00005 ABC transporter M480_3310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M480_3311 PF02378 Phosphotransferase system, EIIC M480_3312 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M480_3313 PF07883 Cupin domain M480_3313 PF12833 Helix-turn-helix domain M480_3314 PF04794 YdjC-like protein M480_3317 PF03925 SeqA protein M480_3317 PF17206 M480_3317 M480_3318 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M480_3318 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M480_3318 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M480_3318 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M480_332 PF13407 Periplasmic binding protein domain M480_3321 PF00892 EamA-like transporter family M480_3322 PF00072 Response regulator receiver domain M480_3322 PF00486 Transcriptional regulatory protein, C terminal M480_3323 PF00512 His Kinase A (phospho-acceptor) domain M480_3323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_3323 PF13492 GAF domain M480_3323 PF13493 Domain of unknown function (DUF4118) M480_3324 PF02702 Osmosensitive K+ channel His kinase sensor domain M480_3325 PF02669 M480_3325 M480_3326 PF00122 E1-E2 ATPase M480_3326 PF00702 haloacid dehalogenase-like hydrolase M480_3327 PF03814 M480_3327 M480_3328 PF10725 M480_3328 M480_3329 PF08349 M480_3329 M480_333 PF00107 Zinc-binding dehydrogenase M480_333 PF08240 Alcohol dehydrogenase GroES-like domain M480_3330 PF00875 DNA photolyase M480_3330 PF03441 FAD binding domain of DNA photolyase M480_3331 PF02112 M480_3331 M480_3332 PF01784 NIF3 (NGG1p interacting factor 3) M480_3334 PF02682 Allophanate hydrolase subunit 1 M480_3335 PF02626 Allophanate hydrolase subunit 2 M480_3336 PF03746 LamB/YcsF family M480_3337 PF06149 M480_3337 M480_3338 PF06166 M480_3338 M480_3339 PF01470 Pyroglutamyl peptidase M480_334 PF16809 M480_334 M480_3340 PF03167 Uracil DNA glycosylase superfamily M480_3341 PF01228 Glycine radical M480_3342 PF11187 Protein of unknown function (DUF2974) M480_3346 PF00270 DEAD/DEAH box helicase M480_3346 PF00271 Helicase conserved C-terminal domain M480_3347 PF05175 Methyltransferase small domain M480_3348 PF00890 FAD binding domain M480_3348 PF02910 Fumarate reductase flavoprotein C-term M480_3349 PF04542 Sigma-70 region 2 M480_3349 PF08281 Sigma-70, region 4 M480_335 PF16809 M480_335 M480_3350 PF03872 Anti sigma-E protein RseA, N-terminal domain M480_3350 PF03873 Anti sigma-E protein RseA, C-terminal domain M480_3351 PF03888 MucB/RseB family M480_3351 PF17188 M480_3351 M480_3352 PF04246 M480_3352 M480_3354 PF00009 Elongation factor Tu GTP binding domain M480_3354 PF00679 Elongation factor G C-terminus M480_3354 PF03144 Elongation factor Tu domain 2 M480_3354 PF06421 GTP-binding protein LepA C-terminus M480_3355 PF00717 Peptidase S24-like M480_3355 PF10502 Signal peptidase, peptidase S26 M480_3356 PF00035 Double-stranded RNA binding motif M480_3356 PF14622 Ribonuclease-III-like M480_3357 PF01926 50S ribosome-binding GTPase M480_3357 PF07650 KH domain M480_3358 PF02565 Recombination protein O C terminal M480_3358 PF11967 Recombination protein O N terminal M480_3359 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M480_336 PF01545 Cation efflux family M480_3360 PF01648 4'-phosphopantetheinyl transferase superfamily M480_3361 PF01797 Transposase IS200 like M480_3362 PF06303 Organiser of macrodomain of Terminus of chromosome M480_3362 PF17414 M480_3362 M480_3363 PF05362 Lon protease (S16) C-terminal proteolytic domain M480_3363 PF13654 AAA domain M480_3364 PF07977 FabA-like domain M480_3366 PF00109 Beta-ketoacyl synthase, N-terminal domain M480_3367 PF00665 Integrase core domain M480_3367 PF02796 Helix-turn-helix domain of resolvase M480_3368 PF01695 IstB-like ATP binding protein M480_3369 PF00109 Beta-ketoacyl synthase, N-terminal domain M480_3369 PF02801 Beta-ketoacyl synthase, C-terminal domain M480_337 PF13505 Outer membrane protein beta-barrel domain M480_3370 PF01797 Transposase IS200 like M480_3371 PF00691 OmpA family M480_3371 PF01389 OmpA-like transmembrane domain M480_3372 PF03846 Cell division inhibitor SulA M480_3373 PF04993 TfoX N-terminal domain M480_3373 PF04994 TfoX C-terminal domain M480_3374 PF12805 M480_3374 M480_3374 PF13515 M480_3374 M480_3375 PF03733 M480_3375 M480_3376 PF00580 UvrD/REP helicase N-terminal domain M480_3376 PF12462 M480_3376 M480_3376 PF13361 UvrD-like helicase C-terminal domain M480_3377 PF02142 MGS-like domain M480_3378 PF09829 M480_3378 M480_3379 PF13380 CoA binding domain M480_338 PF00892 EamA-like transporter family M480_3380 PF08755 Hemimethylated DNA-binding protein YccV like M480_3381 PF10672 S-adenosylmethionine-dependent methyltransferase M480_3382 PF00708 Acylphosphatase M480_3383 PF04358 DsrC like protein M480_3385 PF13610 M480_3385 M480_3389 PF01565 FAD binding domain M480_3389 PF13480 Acetyltransferase (GNAT) domain M480_339 PF00583 Acetyltransferase (GNAT) family M480_3390 PF13561 Enoyl-(Acyl carrier protein) reductase M480_3392 PF07977 FabA-like domain M480_3393 PF00109 Beta-ketoacyl synthase, N-terminal domain M480_3393 PF02801 Beta-ketoacyl synthase, C-terminal domain M480_3394 PF13561 Enoyl-(Acyl carrier protein) reductase M480_3395 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M480_3395 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M480_3396 PF00378 Enoyl-CoA hydratase/isomerase family M480_3397 PF00378 Enoyl-CoA hydratase/isomerase family M480_3398 PF13561 Enoyl-(Acyl carrier protein) reductase M480_3399 PF13924 M480_3399 M480_34 PF01544 CorA-like Mg2+ transporter protein M480_340 PF13649 Methyltransferase domain M480_3400 PF00550 Phosphopantetheine attachment site M480_3401 PF00698 Acyl transferase domain M480_3403 PF05591 M480_3403 M480_3404 PF05943 M480_3404 M480_3405 PF05936 M480_3405 M480_3406 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M480_3407 PF00691 OmpA family M480_3408 PF05638 Protein of unknown function (DUF796) M480_3409 PF00004 ATPase family associated with various cellular activities (AAA) M480_3409 PF07724 AAA domain (Cdc48 subfamily) M480_3409 PF10431 C-terminal, D2-small domain, of ClpB protein M480_341 PF00210 Ferritin-like domain M480_3410 PF05954 Phage late control gene D protein (GPD) M480_3410 PF10106 M480_3410 M480_3410 PF13296 M480_3410 M480_3411 PF01551 Peptidase family M23 M480_3413 PF10106 M480_3413 M480_3415 PF01551 Peptidase family M23 M480_3418 PF06744 M480_3418 M480_3418 PF06761 M480_3418 M480_3419 PF06812 M480_3419 M480_3419 PF16989 M480_3419 M480_342 PF02698 DUF218 domain M480_3420 PF05488 PAAR motif M480_3420 PF15607 M480_3420 M480_3422 PF05947 M480_3422 M480_3423 PF06996 M480_3423 M480_3424 PF12790 Type VI secretion lipoprotein M480_3425 PF04965 Gene 25-like lysozyme M480_3426 PF06812 M480_3426 M480_3426 PF12486 M480_3426 M480_3427 PF16809 M480_3427 M480_3428 PF00005 ABC transporter M480_3428 PF12848 ABC transporter M480_3429 PF16809 M480_3429 M480_343 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_3430 PF00899 ThiF family M480_3431 PF00994 Probable molybdopterin binding domain M480_3431 PF03453 MoeA N-terminal region (domain I and II) M480_3431 PF03454 MoeA C-terminal region (domain IV) M480_3432 PF04055 Radical SAM superfamily M480_3433 PF00005 ABC transporter M480_3434 PF13437 HlyD family secretion protein M480_3437 PF00756 Putative esterase M480_3438 PF00107 Zinc-binding dehydrogenase M480_3438 PF08240 Alcohol dehydrogenase GroES-like domain M480_3439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3439 PF03466 LysR substrate binding domain M480_344 PF00528 Binding-protein-dependent transport system inner membrane component M480_3440 PF06779 M480_3440 M480_3441 PF01227 GTP cyclohydrolase I M480_3442 PF04235 M480_3442 M480_3443 PF13407 Periplasmic binding protein domain M480_3444 PF00005 ABC transporter M480_3445 PF02653 M480_3445 M480_3446 PF01695 IstB-like ATP binding protein M480_3449 PF00665 Integrase core domain M480_3449 PF02796 Helix-turn-helix domain of resolvase M480_345 PF00005 ABC transporter M480_3450 PF02653 M480_3450 M480_3451 PF02698 DUF218 domain M480_3452 PF00390 Malic enzyme, N-terminal domain M480_3452 PF03949 Malic enzyme, NAD binding domain M480_3453 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M480_3453 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M480_3454 PF04172 M480_3454 M480_3455 PF03788 M480_3455 M480_3456 PF07690 Major Facilitator Superfamily M480_3457 PF08309 M480_3457 M480_3458 PF13407 Periplasmic binding protein domain M480_346 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_346 PF08448 PAS fold M480_346 PF13426 PAS domain M480_3460 PF01797 Transposase IS200 like M480_3461 PF01588 Putative tRNA binding domain M480_3461 PF09334 tRNA synthetases class I (M) M480_3462 PF10609 ParA/MinD ATPase like M480_3463 PF00485 Phosphoribulokinase / Uridine kinase family M480_3464 PF00692 dUTPase M480_3465 PF05170 M480_3465 M480_3465 PF13502 M480_3465 M480_3466 PF00571 CBS domain M480_3466 PF03471 Transporter associated domain M480_3466 PF03741 M480_3466 M480_3467 PF06276 Ferric iron reductase FhuF-like transporter M480_3467 PF11575 M480_3467 M480_3468 PF00282 Pyridoxal-dependent decarboxylase conserved domain M480_3469 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M480_347 PF05971 Protein of unknown function (DUF890) M480_3470 PF13523 Acetyltransferase (GNAT) domain M480_3471 PF04183 IucA / IucC family M480_3471 PF06276 Ferric iron reductase FhuF-like transporter M480_3472 PF00005 ABC transporter M480_3473 PF01032 FecCD transport family M480_3474 PF01032 FecCD transport family M480_3475 PF01497 Periplasmic binding protein M480_3476 PF00593 TonB dependent receptor M480_3476 PF07715 TonB-dependent Receptor Plug Domain M480_3477 PF04183 IucA / IucC family M480_3477 PF06276 Ferric iron reductase FhuF-like transporter M480_3478 PF00483 Nucleotidyl transferase M480_3479 PF00483 Nucleotidyl transferase M480_348 PF07338 Protein of unknown function (DUF1471) M480_3480 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M480_3480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M480_3481 PF01502 Phosphoribosyl-AMP cyclohydrolase M480_3481 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M480_3482 PF00977 Histidine biosynthesis protein M480_3483 PF00977 Histidine biosynthesis protein M480_3484 PF00117 Glutamine amidotransferase class-I M480_3485 PF00475 Imidazoleglycerol-phosphate dehydratase M480_3485 PF13242 HAD-hyrolase-like M480_3486 PF00155 Aminotransferase class I and II M480_3487 PF00815 Histidinol dehydrogenase M480_3488 PF01634 ATP phosphoribosyltransferase M480_3488 PF08029 HisG, C-terminal domain M480_3489 PF01370 NAD dependent epimerase/dehydratase family M480_349 PF00591 Glycosyl transferase family, a/b domain M480_349 PF02885 Glycosyl transferase family, helical bundle domain M480_3490 PF16695 M480_3490 M480_3491 PF02653 M480_3491 M480_3492 PF00005 ABC transporter M480_3493 PF00005 ABC transporter M480_3494 PF00465 Iron-containing alcohol dehydrogenase M480_3496 PF13520 Amino acid permease M480_3497 PF00929 Exonuclease M480_3497 PF08411 Exonuclease C-terminal M480_3498 PF07993 Male sterility protein M480_3499 PF04363 M480_3499 M480_35 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_350 PF00501 AMP-binding enzyme M480_3500 PF00872 M480_3500 M480_3501 PF02369 Bacterial Ig-like domain (group 1) M480_3501 PF09134 Invasin, domain 3 M480_3501 PF11924 Protein of unknown function (DUF3442) M480_3502 PF00872 M480_3502 M480_3503 PF07690 Major Facilitator Superfamily M480_3504 PF04134 M480_3504 M480_3505 PF13561 Enoyl-(Acyl carrier protein) reductase M480_3506 PF01557 Fumarylacetoacetate (FAA) hydrolase family M480_3507 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M480_3507 PF13378 Enolase C-terminal domain-like M480_3509 PF01070 FMN-dependent dehydrogenase M480_351 PF13378 Enolase C-terminal domain-like M480_3510 PF00764 Arginosuccinate synthase M480_3511 PF01554 MatE M480_3512 PF07690 Major Facilitator Superfamily M480_3513 PF01522 Polysaccharide deacetylase M480_3515 PF09831 M480_3515 M480_3517 PF00072 Response regulator receiver domain M480_3517 PF00196 Bacterial regulatory proteins, luxR family M480_3518 PF06808 M480_3518 M480_3519 PF04290 M480_3519 M480_352 PF00378 Enoyl-CoA hydratase/isomerase family M480_3520 PF03480 Bacterial extracellular solute-binding protein, family 7 M480_3521 PF01648 4'-phosphopantetheinyl transferase superfamily M480_3524 PF02065 Melibiase M480_3524 PF16875 M480_3524 M480_3525 PF01306 LacY proton/sugar symporter M480_3526 PF00356 Bacterial regulatory proteins, lacI family M480_3526 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M480_3528 PF06167 Glucose-regulated metallo-peptidase M90 M480_3529 PF03795 YCII-related domain M480_353 PF12697 Alpha/beta hydrolase family M480_3530 PF01163 RIO1 family M480_3531 PF01797 Transposase IS200 like M480_3532 PF00005 ABC transporter M480_3532 PF00664 ABC transporter transmembrane region M480_3534 PF12833 Helix-turn-helix domain M480_3536 PF10964 M480_3536 M480_3537 PF13996 M480_3537 M480_3538 PF13974 M480_3538 M480_3539 PF10765 Protein of unknown function (DUF2591) M480_354 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M480_354 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M480_354 PF16582 M480_354 M480_3540 PF13269 M480_3540 M480_3541 PF00324 Amino acid permease M480_3542 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP M480_3544 PF00313 'Cold-shock' DNA-binding domain M480_3545 PF02578 Multi-copper polyphenol oxidoreductase laccase M480_3546 PF13847 Methyltransferase domain M480_3548 PF00989 PAS fold M480_3548 PF00990 GGDEF domain M480_3548 PF13426 PAS domain M480_3549 PF00593 TonB dependent receptor M480_3549 PF07715 TonB-dependent Receptor Plug Domain M480_355 PF00425 chorismate binding enzyme M480_3550 PF02659 M480_3550 M480_3551 PF06173 M480_3551 M480_3552 PF03613 M480_3552 M480_3553 PF03609 M480_3553 M480_3554 PF03610 PTS system fructose IIA component M480_3554 PF03830 PTS system sorbose subfamily IIB component M480_3555 PF00571 CBS domain M480_3555 PF03741 M480_3555 M480_3556 PF01047 MarR family M480_3557 PF01557 Fumarylacetoacetate (FAA) hydrolase family M480_3558 PF01557 Fumarylacetoacetate (FAA) hydrolase family M480_3559 PF00171 Aldehyde dehydrogenase family M480_3560 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M480_3561 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase M480_3563 PF03328 HpcH/HpaI aldolase/citrate lyase family M480_3564 PF07690 Major Facilitator Superfamily M480_3564 PF11700 M480_3564 M480_3565 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal M480_3565 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal M480_3566 PF01613 Flavin reductase like domain M480_3567 PF03313 M480_3567 M480_3567 PF03315 Serine dehydratase beta chain M480_3568 PF00293 NUDIX domain M480_3569 PF00425 chorismate binding enzyme M480_3569 PF04715 Anthranilate synthase component I, N terminal region M480_357 PF05957 M480_357 M480_3570 PF03701 M480_3570 M480_3571 PF02222 ATP-grasp domain M480_3572 PF00270 DEAD/DEAH box helicase M480_3572 PF00271 Helicase conserved C-terminal domain M480_3572 PF03880 DbpA RNA binding domain M480_3573 PF07130 YebG protein M480_3574 PF04266 ASCH domain M480_3575 PF13995 YebF-like protein M480_3576 PF00326 Prolyl oligopeptidase family M480_3576 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M480_3577 PF00561 alpha/beta hydrolase fold M480_3578 PF06440 DNA polymerase III, theta subunit M480_3579 PF00210 Ferritin-like domain M480_3580 PF04234 CopC domain M480_3581 PF05425 M480_3581 M480_3582 PF10709 M480_3582 M480_3583 PF07377 Protein of unknown function (DUF1493) M480_3585 PF01312 FlhB HrpN YscU SpaS Family M480_3586 PF00771 FHIPEP family M480_3587 PF06366 M480_3587 M480_3588 PF11924 Protein of unknown function (DUF3442) M480_3589 PF01797 Transposase IS200 like M480_359 PF00920 Dehydratase family M480_3590 PF02369 Bacterial Ig-like domain (group 1) M480_3590 PF07979 Intimin C-type lectin domain M480_3590 PF09134 Invasin, domain 3 M480_3590 PF11924 Protein of unknown function (DUF3442) M480_3591 PF05130 FlgN protein M480_3592 PF04316 Anti-sigma-28 factor, FlgM M480_3593 PF13144 SAF-like M480_3594 PF00460 Flagella basal body rod protein M480_3595 PF00460 Flagella basal body rod protein M480_3595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_3596 PF03963 M480_3596 M480_3596 PF13860 FlgD Ig-like domain M480_3596 PF13861 FlgD Tudor-like domain M480_3597 PF00460 Flagella basal body rod protein M480_3597 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_3597 PF07559 Flagellar basal body protein FlaE M480_3598 PF00460 Flagella basal body rod protein M480_3599 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_36 PF00246 Zinc carboxypeptidase M480_360 PF03928 Domain of unknown function (DUF336) M480_3600 PF02107 M480_3600 M480_3601 PF02119 M480_3601 M480_3602 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M480_3602 PF10135 M480_3602 M480_3603 PF00460 Flagella basal body rod protein M480_3603 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M480_3604 PF00669 Bacterial flagellin N-terminal helical region M480_3605 PF04198 Putative sugar-binding domain M480_3606 PF00596 Class II Aldolase and Adducin N-terminal domain M480_3606 PF13561 Enoyl-(Acyl carrier protein) reductase M480_3607 PF02653 M480_3607 M480_3608 PF13407 Periplasmic binding protein domain M480_3609 PF00005 ABC transporter M480_361 PF07690 Major Facilitator Superfamily M480_3610 PF02653 M480_3610 M480_3611 PF00294 pfkB family carbohydrate kinase M480_3612 PF15919 M480_3612 M480_3613 PF07927 YcfA-like protein M480_3614 PF01311 M480_3614 M480_3615 PF01313 M480_3615 M480_3616 PF00813 M480_3616 M480_3617 PF04347 M480_3617 M480_3618 PF01052 Surface presentation of antigens (SPOA) M480_3618 PF16973 M480_3618 M480_3619 PF01052 Surface presentation of antigens (SPOA) M480_3619 PF02154 Flagellar motor switch protein FliM M480_362 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M480_362 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M480_3620 PF03748 M480_3620 M480_3621 PF02120 Flagellar hook-length control protein FliK M480_3622 PF02050 Flagellar FliJ protein M480_3623 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M480_3624 PF02108 M480_3624 M480_3625 PF01706 FliG C-terminal domain M480_3625 PF14841 FliG middle domain M480_3625 PF14842 FliG N-terminal domain M480_3626 PF01514 Secretory protein of YscJ/FliF family M480_3626 PF08345 M480_3626 M480_3627 PF02049 M480_3627 M480_3629 PF02661 Fic/DOC family M480_363 PF00356 Bacterial regulatory proteins, lacI family M480_363 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M480_3630 PF00730 HhH-GPD superfamily base excision DNA repair protein M480_3631 PF13487 HD domain M480_3632 PF12833 Helix-turn-helix domain M480_3633 PF05400 Flagellar protein FliT M480_3634 PF02561 Flagellar protein FliS M480_3635 PF02465 M480_3635 M480_3635 PF07195 M480_3635 M480_3635 PF07196 Flagellin hook IN motif M480_3636 PF00669 Bacterial flagellin N-terminal helical region M480_3636 PF00700 Bacterial flagellin C-terminal helical region M480_3637 PF04539 Sigma-70 region 3 M480_3637 PF04542 Sigma-70 region 2 M480_3637 PF04545 Sigma-70, region 4 M480_3638 PF02899 Phage integrase, N-terminal SAM-like domain M480_3639 PF00291 Pyridoxal-phosphate dependent enzyme M480_364 PF02638 M480_364 M480_3640 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_3641 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_3642 PF00528 Binding-protein-dependent transport system inner membrane component M480_3643 PF00005 ABC transporter M480_3646 PF00171 Aldehyde dehydrogenase family M480_3646 PF01619 Proline dehydrogenase M480_3646 PF14850 DNA-binding domain of Proline dehydrogenase M480_3648 PF00474 Sodium:solute symporter family M480_3649 PF03239 M480_3649 M480_365 PF00106 short chain dehydrogenase M480_3650 PF09375 Imelysin M480_3650 PF13473 Cupredoxin-like domain M480_3651 PF04261 Dyp-type peroxidase family M480_3652 PF03358 NADPH-dependent FMN reductase M480_3653 PF01344 Kelch motif M480_3654 PF00324 Amino acid permease M480_3656 PF13505 Outer membrane protein beta-barrel domain M480_3658 PF06942 M480_3658 M480_3659 PF10769 M480_3659 M480_366 PF01202 Shikimate kinase M480_3660 PF00072 Response regulator receiver domain M480_3660 PF00196 Bacterial regulatory proteins, luxR family M480_3661 PF01541 GIY-YIG catalytic domain M480_3661 PF02151 UvrB/uvrC motif M480_3661 PF08459 UvrC Helix-hairpin-helix N-terminal M480_3661 PF14520 Helix-hairpin-helix domain M480_3662 PF01066 CDP-alcohol phosphatidyltransferase M480_3667 PF03796 DnaB-like helicase C terminal domain M480_367 PF04074 Domain of unknown function (DUF386) M480_3671 PF05638 Protein of unknown function (DUF796) M480_3672 PF00665 Integrase core domain M480_3672 PF13565 M480_3672 M480_3673 PF01527 Transposase M480_3676 PF10908 M480_3676 M480_3678 PF04965 Gene 25-like lysozyme M480_3679 PF04717 Phage-related baseplate assembly protein M480_3680 PF04365 Protein of unknown function (DUF497) M480_3681 PF14384 M480_3681 M480_3682 PF13676 TIR domain M480_3683 PF00872 M480_3683 M480_3684 PF00872 M480_3684 M480_369 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M480_3690 PF00392 Bacterial regulatory proteins, gntR family M480_3690 PF07702 UTRA domain M480_3691 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_3692 PF01547 Bacterial extracellular solute-binding protein M480_3693 PF00528 Binding-protein-dependent transport system inner membrane component M480_3694 PF00528 Binding-protein-dependent transport system inner membrane component M480_3695 PF00005 ABC transporter M480_3696 PF08402 TOBE domain M480_3698 PF00665 Integrase core domain M480_3698 PF02796 Helix-turn-helix domain of resolvase M480_3699 PF01695 IstB-like ATP binding protein M480_37 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M480_37 PF13378 Enolase C-terminal domain-like M480_370 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M480_3700 PF01695 IstB-like ATP binding protein M480_3701 PF05321 Haemolysin expression modulating protein M480_3702 PF01258 Prokaryotic dksA/traR C4-type zinc finger M480_3703 PF11198 M480_3703 M480_3705 PF05930 Prophage CP4-57 regulatory protein (AlpA) M480_3708 PF00593 TonB dependent receptor M480_3708 PF07715 TonB-dependent Receptor Plug Domain M480_3709 PF00501 AMP-binding enzyme M480_3709 PF13193 AMP-binding enzyme C-terminal domain M480_371 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M480_371 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M480_3710 PF00975 Thioesterase domain M480_3711 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_3712 PF00109 Beta-ketoacyl synthase, N-terminal domain M480_3712 PF00550 Phosphopantetheine attachment site M480_3712 PF00668 Condensation domain M480_3712 PF00698 Acyl transferase domain M480_3712 PF00975 Thioesterase domain M480_3712 PF02801 Beta-ketoacyl synthase, C-terminal domain M480_3712 PF08242 Methyltransferase domain M480_3712 PF08659 KR domain M480_3712 PF16197 M480_3712 M480_3713 PF00501 AMP-binding enzyme M480_3713 PF00550 Phosphopantetheine attachment site M480_3713 PF00668 Condensation domain M480_3713 PF08242 Methyltransferase domain M480_3714 PF12833 Helix-turn-helix domain M480_3715 PF00005 ABC transporter M480_3715 PF00664 ABC transporter transmembrane region M480_3716 PF00005 ABC transporter M480_3716 PF00664 ABC transporter transmembrane region M480_3717 PF07690 Major Facilitator Superfamily M480_3718 PF00425 chorismate binding enzyme M480_3719 PF00589 Phage integrase family M480_3719 PF13356 Domain of unknown function (DUF4102) M480_372 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M480_3721 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_3722 PF00872 M480_3722 M480_3723 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_3724 PF00419 Fimbrial protein M480_3725 PF00577 Outer membrane usher protein M480_3725 PF13953 PapC C-terminal domain M480_3725 PF13954 PapC N-terminal domain M480_3726 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_3726 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_3727 PF00419 Fimbrial protein M480_3728 PF00072 Response regulator receiver domain M480_3728 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_3728 PF00512 His Kinase A (phospho-acceptor) domain M480_3728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_3729 PF00072 Response regulator receiver domain M480_3729 PF00196 Bacterial regulatory proteins, luxR family M480_373 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M480_3731 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M480_3731 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M480_3732 PF01575 MaoC like domain M480_3733 PF03328 HpcH/HpaI aldolase/citrate lyase family M480_3734 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3734 PF03466 LysR substrate binding domain M480_3737 PF07690 Major Facilitator Superfamily M480_3738 PF04909 Amidohydrolase M480_3739 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3739 PF03466 LysR substrate binding domain M480_374 PF12838 4Fe-4S dicluster domain M480_3740 PF02508 M480_3740 M480_3741 PF00155 Aminotransferase class I and II M480_3742 PF00324 Amino acid permease M480_3743 PF00455 M480_3743 M480_3743 PF08220 DeoR-like helix-turn-helix domain M480_3744 PF04960 Glutaminase M480_3745 PF07690 Major Facilitator Superfamily M480_3747 PF03239 M480_3747 M480_3748 PF10634 Fe2+ transport protein M480_3749 PF04945 YHS domain M480_3749 PF10080 M480_3749 M480_375 PF00146 NADH dehydrogenase M480_3750 PF02687 M480_3750 M480_3751 PF02687 M480_3751 M480_3751 PF12704 MacB-like periplasmic core domain M480_3752 PF00005 ABC transporter M480_3753 PF00578 AhpC/TSA family M480_3754 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M480_3755 PF03848 Tellurite resistance protein TehB M480_3755 PF09313 Domain of unknown function (DUF1971) M480_3756 PF00557 Metallopeptidase family M24 M480_3756 PF01321 Creatinase/Prolidase N-terminal domain M480_3758 PF01522 Polysaccharide deacetylase M480_3758 PF14883 Hypothetical glycosyl hydrolase family 13 M480_3759 PF00535 Glycosyl transferase family 2 M480_376 PF00384 Molybdopterin oxidoreductase M480_376 PF01568 Molydopterin dinucleotide binding domain M480_376 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M480_376 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M480_376 PF13510 2Fe-2S iron-sulfur cluster binding domain M480_3760 PF13994 M480_3760 M480_3761 PF13302 Acetyltransferase (GNAT) domain M480_3763 PF02562 PhoH-like protein M480_3764 PF01699 Sodium/calcium exchanger protein M480_3766 PF00672 HAMP domain M480_3766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_3766 PF07730 Histidine kinase M480_3766 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M480_3767 PF00155 Aminotransferase class I and II M480_377 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M480_377 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M480_3770 PF00202 Aminotransferase class-III M480_3771 PF04958 Arginine N-succinyltransferase beta subunit M480_3772 PF00171 Aldehyde dehydrogenase family M480_3773 PF04996 Succinylarginine dihydrolase M480_3774 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M480_3775 PF00267 Gram-negative porin M480_3776 PF00872 M480_3776 M480_3777 PF05013 N-formylglutamate amidohydrolase M480_3778 PF01695 IstB-like ATP binding protein M480_3779 PF01695 IstB-like ATP binding protein M480_378 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin M480_3780 PF00665 Integrase core domain M480_3780 PF02796 Helix-turn-helix domain of resolvase M480_3781 PF01979 Amidohydrolase family M480_3782 PF00392 Bacterial regulatory proteins, gntR family M480_3782 PF07702 UTRA domain M480_3783 PF01979 Amidohydrolase family M480_3784 PF05962 HutD M480_3785 PF00425 chorismate binding enzyme M480_3786 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M480_3787 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M480_3788 PF01370 NAD dependent epimerase/dehydratase family M480_3789 PF00753 Metallo-beta-lactamase superfamily M480_379 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M480_379 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M480_3791 PF01370 NAD dependent epimerase/dehydratase family M480_3792 PF13506 Glycosyl transferase family 21 M480_3794 PF04101 Glycosyltransferase family 28 C-terminal domain M480_3797 PF00872 M480_3797 M480_3798 PF07661 M480_3798 M480_3798 PF08238 Sel1 repeat M480_38 PF08534 Redoxin M480_380 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M480_3800 PF13226 M480_3800 M480_3801 PF02502 Ribose/Galactose Isomerase M480_3801 PF12408 Ribose-5-phosphate isomerase M480_3802 PF08242 Methyltransferase domain M480_3803 PF00106 short chain dehydrogenase M480_3807 PF13646 HEAT repeats M480_3808 PF12697 Alpha/beta hydrolase family M480_3809 PF07883 Cupin domain M480_381 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M480_3810 PF02627 Carboxymuconolactone decarboxylase family M480_3811 PF00512 His Kinase A (phospho-acceptor) domain M480_3811 PF00672 HAMP domain M480_3811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_3812 PF00486 Transcriptional regulatory protein, C terminal M480_3813 PF01695 IstB-like ATP binding protein M480_3814 PF00665 Integrase core domain M480_3814 PF02796 Helix-turn-helix domain of resolvase M480_3815 PF00072 Response regulator receiver domain M480_3816 PF01738 Dienelactone hydrolase family M480_3817 PF12682 Flavodoxin M480_3818 PF14358 M480_3818 M480_3819 PF13316 M480_3819 M480_382 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_382 PF03466 LysR substrate binding domain M480_3821 PF07859 alpha/beta hydrolase fold M480_3822 PF00581 Rhodanese-like domain M480_3823 PF00665 Integrase core domain M480_3825 PF01926 50S ribosome-binding GTPase M480_3825 PF06071 Protein of unknown function (DUF933) M480_3826 PF01195 Peptidyl-tRNA hydrolase M480_3827 PF10762 M480_3827 M480_3828 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M480_3828 PF14572 Phosphoribosyl synthetase-associated domain M480_3829 PF00288 GHMP kinases N terminal domain M480_3829 PF08544 GHMP kinases C terminal M480_383 PF00155 Aminotransferase class I and II M480_3830 PF03550 Outer membrane lipoprotein LolB M480_3831 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M480_3831 PF01488 Shikimate / quinate 5-dehydrogenase M480_3831 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M480_3832 PF00472 RF-1 domain M480_3832 PF03462 PCRF domain M480_3833 PF13847 Methyltransferase domain M480_3834 PF04247 M480_3834 M480_3835 PF13369 M480_3835 M480_3835 PF13371 Tetratricopeptide repeat M480_3836 PF00793 DAHP synthetase I family M480_3837 PF00916 M480_3837 M480_3837 PF01740 STAS domain M480_3839 PF03009 Glycerophosphoryl diester phosphodiesterase family M480_384 PF13023 HD domain M480_3840 PF13416 Bacterial extracellular solute-binding protein M480_3841 PF00528 Binding-protein-dependent transport system inner membrane component M480_3842 PF00528 Binding-protein-dependent transport system inner membrane component M480_3843 PF00005 ABC transporter M480_3844 PF01797 Transposase IS200 like M480_3845 PF00005 ABC transporter M480_3846 PF03009 Glycerophosphoryl diester phosphodiesterase family M480_3847 PF00480 ROK family M480_3847 PF13412 Winged helix-turn-helix DNA-binding M480_3849 PF02811 PHP domain M480_385 PF02080 TrkA-C domain M480_385 PF03600 Citrate transporter M480_3850 PF02613 Nitrate reductase delta subunit M480_3851 PF07273 Protein of unknown function (DUF1439) M480_3852 PF07690 Major Facilitator Superfamily M480_3853 PF13302 Acetyltransferase (GNAT) domain M480_3854 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_3855 PF03023 M480_3855 M480_3856 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M480_3856 PF08479 POTRA domain, ShlB-type M480_3856 PF17287 M480_3856 M480_3857 PF05860 haemagglutination activity domain M480_3857 PF13332 M480_3857 M480_3858 PF00750 tRNA synthetases class I (R) M480_3858 PF03485 Arginyl tRNA synthetase N terminal domain M480_3858 PF05746 DALR anticodon binding domain M480_3859 PF06185 YecM protein M480_386 PF13419 Haloacid dehalogenase-like hydrolase M480_3860 PF03932 CutC family M480_3861 PF08003 Protein of unknown function (DUF1698) M480_3862 PF13649 Methyltransferase domain M480_3863 PF01124 MAPEG family M480_3864 PF01904 Protein of unknown function DUF72 M480_3865 PF00152 tRNA synthetases class II (D, K and N) M480_3865 PF01336 OB-fold nucleic acid binding domain M480_3865 PF02938 GAD domain M480_3866 PF00293 NUDIX domain M480_3867 PF01709 Transcriptional regulator M480_3868 PF02075 Crossover junction endodeoxyribonuclease RuvC M480_3869 PF01330 RuvA N terminal domain M480_3869 PF07499 RuvA, C-terminal domain M480_3869 PF14520 Helix-hairpin-helix domain M480_387 PF03887 YfbU domain M480_3870 PF05491 Holliday junction DNA helicase ruvB C-terminus M480_3870 PF05496 Holliday junction DNA helicase ruvB N-terminus M480_3871 PF00950 M480_3871 M480_3872 PF00005 ABC transporter M480_3873 PF01297 Periplasmic solute binding protein family M480_3874 PF01551 Peptidase family M23 M480_3874 PF04225 Opacity-associated protein A LysM-like domain M480_3874 PF08525 M480_3874 M480_3875 PF03279 M480_3875 M480_3876 PF00224 Pyruvate kinase, barrel domain M480_3876 PF02887 Pyruvate kinase, alpha/beta domain M480_3877 PF01380 SIS domain M480_3877 PF01418 Helix-turn-helix domain, rpiR family M480_3878 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M480_3878 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M480_388 PF04217 M480_388 M480_3880 PF01081 KDPG and KHG aldolase M480_3881 PF00893 Small Multidrug Resistance protein M480_3882 PF00893 Small Multidrug Resistance protein M480_3883 PF01042 Endoribonuclease L-PSP M480_3884 PF06733 DEAD_2 M480_3884 PF13307 Helicase C-terminal domain M480_3885 PF00814 Glycoprotease family M480_3887 PF00501 AMP-binding enzyme M480_3887 PF13193 AMP-binding enzyme C-terminal domain M480_3888 PF00570 HRDC domain M480_3888 PF01612 3'-5' exonuclease M480_3889 PF03776 Septum formation topological specificity factor MinE M480_389 PF00871 Acetokinase family M480_3890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M480_3891 PF03775 Septum formation inhibitor MinC, C-terminal domain M480_3891 PF05209 Septum formation inhibitor MinC, N-terminal domain M480_3892 PF05166 YcgL domain M480_3893 PF13406 Transglycosylase SLT domain M480_3894 PF01557 Fumarylacetoacetate (FAA) hydrolase family M480_3895 PF03692 M480_3895 M480_3896 PF00589 Phage integrase family M480_3896 PF12167 M480_3896 M480_3897 PF00665 Integrase core domain M480_3897 PF02796 Helix-turn-helix domain of resolvase M480_3898 PF01695 IstB-like ATP binding protein M480_3899 PF06806 Putative excisionase (DUF1233) M480_39 PF00665 Integrase core domain M480_39 PF02796 Helix-turn-helix domain of resolvase M480_390 PF01515 Phosphate acetyl/butaryl transferase M480_390 PF07085 DRTGG domain M480_390 PF13500 AAA domain M480_3900 PF02086 D12 class N6 adenine-specific DNA methyltransferase M480_3901 PF05772 NinB protein M480_3902 PF05766 M480_3902 M480_3903 PF06530 M480_3903 M480_3904 PF02498 M480_3904 M480_3907 PF16080 M480_3907 M480_3908 PF00959 Phage lysozyme M480_3909 PF03245 M480_3909 M480_391 PF00356 Bacterial regulatory proteins, lacI family M480_391 PF13377 Periplasmic binding protein-like domain M480_3911 PF03374 M480_3911 M480_3913 PF10045 M480_3913 M480_3916 PF13264 M480_3916 M480_3919 PF02368 Bacterial Ig-like domain (group 2) M480_392 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M480_3924 PF13554 Bacteriophage related domain of unknown function M480_3925 PF02368 Bacterial Ig-like domain (group 2) M480_3925 PF08813 M480_3925 M480_3926 PF08748 M480_3926 M480_3927 PF08809 M480_3927 M480_3928 PF06791 M480_3928 M480_3928 PF09718 M480_3928 M480_3929 PF05939 M480_3929 M480_393 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M480_3930 PF01797 Transposase IS200 like M480_3931 PF05100 M480_3931 M480_3932 PF00877 NlpC/P60 family M480_3932 PF14464 Prokaryotic homologs of the JAB domain M480_3935 PF03869 Arc-like DNA binding domain M480_3937 PF02498 M480_3937 M480_3938 PF13248 M480_3938 M480_394 PF03611 M480_394 M480_3940 PF06805 M480_3940 M480_3943 PF09327 M480_3943 M480_3943 PF13550 M480_3943 M480_3946 PF02413 M480_3946 M480_3947 PF07690 Major Facilitator Superfamily M480_3948 PF00266 Aminotransferase class-V M480_395 PF00293 NUDIX domain M480_3951 PF02600 Disulfide bond formation protein DsbB M480_3952 PF06450 M480_3952 M480_3953 PF00392 Bacterial regulatory proteins, gntR family M480_3953 PF07840 FadR C-terminal domain M480_3954 PF04293 M480_3954 M480_3955 PF01266 FAD dependent oxidoreductase M480_3956 PF07690 Major Facilitator Superfamily M480_3957 PF02678 Pirin M480_3957 PF05726 Pirin C-terminal cupin domain M480_3958 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3958 PF03466 LysR substrate binding domain M480_3959 PF00892 EamA-like transporter family M480_396 PF12850 Calcineurin-like phosphoesterase superfamily domain M480_3960 PF04285 M480_3960 M480_3961 PF06798 M480_3961 M480_3961 PF08298 PrkA AAA domain M480_3962 PF06629 M480_3962 M480_3963 PF01263 Aldose 1-epimerase M480_3964 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M480_3964 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M480_3965 PF01641 SelR domain M480_3966 PF07023 M480_3966 M480_3967 PF00857 Isochorismatase family M480_3968 PF00710 Asparaginase M480_3969 PF01343 Peptidase family S49 M480_397 PF12850 Calcineurin-like phosphoesterase superfamily domain M480_3970 PF00881 Nitroreductase family M480_3971 PF00586 AIR synthase related protein, N-terminal domain M480_3971 PF02769 AIR synthase related protein, C-terminal domain M480_3972 PF01131 DNA topoisomerase M480_3972 PF01751 Toprim domain M480_3973 PF07383 M480_3973 M480_3974 PF00293 NUDIX domain M480_3975 PF03372 Endonuclease/Exonuclease/phosphatase family M480_3976 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_3977 PF00872 M480_3977 M480_3978 PF00872 M480_3978 M480_3979 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M480_3979 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M480_3979 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M480_398 PF00563 EAL domain M480_3980 PF00072 Response regulator receiver domain M480_3981 PF02810 SEC-C motif M480_3982 PF00551 Formyl transferase M480_3982 PF01842 ACT domain M480_3985 PF00872 M480_3985 M480_3986 PF00816 H-NS histone family M480_3987 PF00265 Thymidine kinase M480_3988 PF00171 Aldehyde dehydrogenase family M480_3988 PF00465 Iron-containing alcohol dehydrogenase M480_3989 PF01914 M480_3989 M480_399 PF01370 NAD dependent epimerase/dehydratase family M480_399 PF08338 Domain of unknown function (DUF1731) M480_3990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_3991 PF00528 Binding-protein-dependent transport system inner membrane component M480_3992 PF00528 Binding-protein-dependent transport system inner membrane component M480_3992 PF12911 M480_3992 M480_3993 PF00005 ABC transporter M480_3993 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M480_3994 PF00005 ABC transporter M480_3994 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M480_3996 PF04269 Protein of unknown function, DUF440 M480_3997 PF13091 PLD-like domain M480_3997 PF13396 M480_3997 M480_3998 PF13505 Outer membrane protein beta-barrel domain M480_40 PF01695 IstB-like ATP binding protein M480_400 PF00005 ABC transporter M480_4000 PF13453 M480_4000 M480_4001 PF03795 YCII-related domain M480_4003 PF03544 Gram-negative bacterial TonB protein C-terminal M480_4003 PF16031 M480_4003 M480_4004 PF00872 M480_4004 M480_4005 PF03061 Thioesterase superfamily M480_4006 PF04279 M480_4006 M480_4007 PF00916 M480_4007 M480_4008 PF01740 STAS domain M480_4009 PF06790 M480_4009 M480_401 PF00528 Binding-protein-dependent transport system inner membrane component M480_4010 PF03922 OmpW family M480_4011 PF04972 BON domain M480_4012 PF00290 Tryptophan synthase alpha chain M480_4013 PF00291 Pyridoxal-phosphate dependent enzyme M480_4014 PF00218 Indole-3-glycerol phosphate synthase M480_4014 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M480_4015 PF00591 Glycosyl transferase family, a/b domain M480_4015 PF02885 Glycosyl transferase family, helical bundle domain M480_4016 PF00117 Glutamine amidotransferase class-I M480_4017 PF00425 chorismate binding enzyme M480_4017 PF04715 Anthranilate synthase component I, N terminal region M480_4018 PF02811 PHP domain M480_4019 PF01300 Telomere recombination M480_402 PF00528 Binding-protein-dependent transport system inner membrane component M480_4020 PF00849 RNA pseudouridylate synthase M480_4020 PF01479 S4 domain M480_4021 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M480_4021 PF12557 Cob(I)alamin adenosyltransferase N terminal M480_4022 PF00106 short chain dehydrogenase M480_4023 PF01343 Peptidase family S49 M480_4023 PF08496 M480_4023 M480_4024 PF10692 Protein of unknown function (DUF2498) M480_4026 PF01131 DNA topoisomerase M480_4026 PF01396 M480_4026 M480_4026 PF01751 Toprim domain M480_4026 PF08272 Topoisomerase I zinc-ribbon-like M480_4027 PF01797 Transposase IS200 like M480_4028 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_4028 PF03466 LysR substrate binding domain M480_403 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_4030 PF00330 Aconitase family (aconitate hydratase) M480_4030 PF00694 Aconitase C-terminal domain M480_4031 PF00925 GTP cyclohydrolase II M480_4032 PF01569 PAP2 superfamily M480_4033 PF06305 M480_4033 M480_4034 PF13176 Tetratricopeptide repeat M480_4034 PF13432 Tetratricopeptide repeat M480_4036 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M480_4037 PF01253 Translation initiation factor SUI1 M480_4039 PF00596 Class II Aldolase and Adducin N-terminal domain M480_404 PF02441 Flavoprotein M480_4040 PF09932 M480_4040 M480_4041 PF00923 Transaldolase M480_4042 PF04328 M480_4042 M480_4043 PF02554 M480_4043 M480_4043 PF13722 M480_4043 M480_4044 PF00575 S1 RNA binding domain M480_4044 PF00773 RNB domain M480_4044 PF08206 Ribonuclease B OB domain M480_4045 PF07690 Major Facilitator Superfamily M480_4046 PF01370 NAD dependent epimerase/dehydratase family M480_4047 PF00633 Helix-hairpin-helix motif M480_4047 PF00730 HhH-GPD superfamily base excision DNA repair protein M480_4047 PF10576 Iron-sulfur binding domain of endonuclease III M480_4048 PF02508 M480_4048 M480_4049 PF04205 FMN-binding domain M480_405 PF00156 Phosphoribosyl transferase domain M480_405 PF13522 Glutamine amidotransferase domain M480_4050 PF03116 M480_4050 M480_4051 PF06445 GyrI-like small molecule binding domain M480_4051 PF12833 Helix-turn-helix domain M480_4052 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M480_4052 PF10531 SLBB domain M480_4052 PF13237 4Fe-4S dicluster domain M480_4052 PF13375 RnfC Barrel sandwich hybrid domain M480_4053 PF04060 Putative Fe-S cluster M480_4053 PF14697 4Fe-4S dicluster domain M480_4054 PF02508 M480_4054 M480_4055 PF10754 M480_4055 M480_4056 PF00005 ABC transporter M480_4056 PF00664 ABC transporter transmembrane region M480_4058 PF13533 Biotin-lipoyl like M480_4059 PF00529 HlyD family secretion protein M480_406 PF02674 M480_406 M480_4060 PF00005 ABC transporter M480_4060 PF00664 ABC transporter transmembrane region M480_4060 PF03412 Peptidase C39 family M480_4062 PF02610 L-arabinose isomerase M480_4062 PF11762 L-arabinose isomerase C-terminal domain M480_4063 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_4063 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_4064 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M480_4065 PF00005 ABC transporter M480_4067 PF02653 M480_4067 M480_4068 PF02311 AraC-like ligand binding domain M480_4068 PF12833 Helix-turn-helix domain M480_4069 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M480_4069 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M480_407 PF05036 Sporulation related domain M480_4070 PF13593 SBF-like CPA transporter family (DUF4137) M480_4072 PF06097 M480_4072 M480_4073 PF01238 Phosphomannose isomerase type I M480_4074 PF00206 Lyase M480_4074 PF10415 Fumarase C C-terminus M480_4075 PF05472 DNA replication terminus site-binding protein (Ter protein) M480_4076 PF07690 Major Facilitator Superfamily M480_4077 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_4077 PF03466 LysR substrate binding domain M480_4078 PF00480 ROK family M480_408 PF02875 Mur ligase family, glutamate ligase domain M480_408 PF08245 Mur ligase middle domain M480_4080 PF13500 AAA domain M480_4081 PF00654 Voltage gated chloride channel M480_4082 PF06649 M480_4082 M480_4083 PF00356 Bacterial regulatory proteins, lacI family M480_4083 PF13377 Periplasmic binding protein-like domain M480_4085 PF13407 Periplasmic binding protein domain M480_4086 PF13379 NMT1-like family M480_4087 PF00528 Binding-protein-dependent transport system inner membrane component M480_4088 PF00005 ABC transporter M480_4089 PF01048 Phosphorylase superfamily M480_4089 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus M480_409 PF01039 Carboxyl transferase domain M480_4091 PF07520 M480_4091 M480_4092 PF10139 M480_4092 M480_4093 PF10139 M480_4093 M480_4094 PF07313 Protein of unknown function (DUF1460) M480_4095 PF00205 Thiamine pyrophosphate enzyme, central domain M480_4095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M480_4095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M480_4096 PF13710 ACT domain M480_4097 PF13419 Haloacid dehalogenase-like hydrolase M480_4098 PF13208 M480_4098 M480_4098 PF15615 M480_4098 M480_4099 PF00245 Alkaline phosphatase M480_41 PF01797 Transposase IS200 like M480_410 PF09335 M480_410 M480_4100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M480_4100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M480_4101 PF00027 Cyclic nucleotide-binding domain M480_4101 PF13545 Crp-like helix-turn-helix domain M480_4102 PF00582 Universal stress protein family M480_4103 PF02233 NAD(P) transhydrogenase beta subunit M480_4104 PF09673 M480_4104 M480_4105 PF06834 M480_4105 M480_4106 PF12477 M480_4106 M480_4107 PF09677 M480_4107 M480_4108 PF11130 M480_4108 M480_4109 PF07296 M480_4109 M480_411 PF01416 tRNA pseudouridine synthase M480_4112 PF01258 Prokaryotic dksA/traR C4-type zinc finger M480_4113 PF09676 M480_4113 M480_4114 PF03743 Bacterial conjugation TrbI-like protein M480_4115 PF06586 M480_4115 M480_4116 PF05309 M480_4116 M480_4117 PF07178 M480_4117 M480_4118 PF05513 M480_4118 M480_4119 PF00872 M480_4119 M480_412 PF01118 Semialdehyde dehydrogenase, NAD binding domain M480_412 PF02774 Semialdehyde dehydrogenase, dimerisation domain M480_4120 PF10412 Type IV secretion-system coupling protein DNA-binding domain M480_4120 PF12615 M480_4120 M480_4121 PF07057 DNA helicase TraI M480_4121 PF08751 TrwC relaxase M480_4121 PF13604 AAA domain M480_4122 PF05857 M480_4122 M480_4123 PF04352 ProQ/FINO family M480_4123 PF12602 Fertility inhibition protein N terminal M480_4124 PF13462 Thioredoxin M480_4125 PF13091 PLD-like domain M480_4126 PF02387 M480_4126 M480_4128 PF01548 M480_4128 M480_4128 PF02371 M480_4128 M480_413 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M480_413 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M480_413 PF11890 Domain of unknown function (DUF3410) M480_4130 PF13091 PLD-like domain M480_4132 PF04754 M480_4132 M480_4133 PF00239 Resolvase, N terminal domain M480_4134 PF05016 Plasmid stabilisation system protein M480_4135 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system M480_4136 PF13614 AAA domain M480_4137 PF02195 ParB-like nuclease domain M480_4137 PF08775 ParB family M480_4138 PF13191 AAA ATPase domain M480_414 PF02311 AraC-like ligand binding domain M480_414 PF12833 Helix-turn-helix domain M480_4140 PF01555 DNA methylase M480_4142 PF07128 M480_4142 M480_4144 PF07275 Antirestriction protein (ArdA) M480_4145 PF06006 Bacterial protein of unknown function (DUF905) M480_4146 PF02195 ParB-like nuclease domain M480_4147 PF00665 Integrase core domain M480_4147 PF02796 Helix-turn-helix domain of resolvase M480_4148 PF01695 IstB-like ATP binding protein M480_4149 PF02413 M480_4149 M480_415 PF00892 EamA-like transporter family M480_4150 PF03335 Phage tail fibre repeat M480_4150 PF03406 M480_4150 M480_4150 PF07484 Phage Tail Collar Domain M480_4151 PF14301 M480_4151 M480_4152 PF09327 M480_4152 M480_4152 PF12421 M480_4152 M480_4152 PF13550 M480_4152 M480_4154 PF00877 NlpC/P60 family M480_4154 PF14464 Prokaryotic homologs of the JAB domain M480_4155 PF05100 M480_4155 M480_4156 PF05939 M480_4156 M480_4157 PF09718 M480_4157 M480_4159 PF02368 Bacterial Ig-like domain (group 2) M480_4165 PF02368 Bacterial Ig-like domain (group 2) M480_4169 PF03237 Terminase-like family M480_417 PF00419 Fimbrial protein M480_4174 PF00005 ABC transporter M480_4175 PF02195 ParB-like nuclease domain M480_4176 PF02195 ParB-like nuclease domain M480_4177 PF00270 DEAD/DEAH box helicase M480_4177 PF00271 Helicase conserved C-terminal domain M480_418 PF01177 Asp/Glu/Hydantoin racemase M480_4180 PF03614 M480_4180 M480_4183 PF01797 Transposase IS200 like M480_4187 PF01797 Transposase IS200 like M480_4188 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M480_4189 PF00268 Ribonucleotide reductase, small chain M480_419 PF00109 Beta-ketoacyl synthase, N-terminal domain M480_419 PF02801 Beta-ketoacyl synthase, C-terminal domain M480_4190 PF00317 Ribonucleotide reductase, all-alpha domain M480_4190 PF02867 Ribonucleotide reductase, barrel domain M480_4190 PF03477 ATP cone domain M480_4193 PF13476 AAA domain M480_4195 PF00149 Calcineurin-like phosphoesterase M480_4196 PF09084 NMT1/THI5 like M480_4198 PF01051 Initiator Replication protein M480_42 PF00158 Sigma-54 interaction domain M480_42 PF00989 PAS fold M480_420 PF01266 FAD dependent oxidoreductase M480_420 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M480_4203 PF10765 Protein of unknown function (DUF2591) M480_4204 PF01145 SPFH domain / Band 7 family M480_4206 PF00154 recA bacterial DNA recombination protein M480_4208 PF01367 5'-3' exonuclease, C-terminal SAM fold M480_4208 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M480_421 PF08891 M480_421 M480_4214 PF02811 PHP domain M480_4214 PF07733 Bacterial DNA polymerase III alpha subunit M480_4214 PF14579 Helix-hairpin-helix motif M480_4215 PF07728 AAA domain (dynein-related subfamily) M480_4216 PF06213 M480_4216 M480_4216 PF11775 M480_4216 M480_4218 PF00589 Phage integrase family M480_422 PF04315 M480_422 M480_4220 PF09255 Caf1 Capsule antigen M480_4221 PF00577 Outer membrane usher protein M480_4221 PF13953 PapC C-terminal domain M480_4221 PF13954 PapC N-terminal domain M480_4222 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_4222 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_4223 PF06445 GyrI-like small molecule binding domain M480_4223 PF12833 Helix-turn-helix domain M480_4228 PF01068 ATP dependent DNA ligase domain M480_423 PF01925 M480_423 M480_4231 PF13643 M480_4231 M480_4232 PF00872 M480_4232 M480_4233 PF07916 M480_4233 M480_4234 PF06122 M480_4234 M480_4235 PF13728 F plasmid transfer operon protein M480_4236 PF09679 M480_4236 M480_4237 PF13728 F plasmid transfer operon protein M480_4239 PF06986 M480_4239 M480_424 PF03411 Penicillin-insensitive murein endopeptidase M480_4240 PF07216 M480_4240 M480_4241 PF09621 M480_4241 M480_4242 PF00771 FHIPEP family M480_4244 PF09474 M480_4244 M480_4246 PF09059 TyeA M480_4247 PF07201 HrpJ-like domain M480_4248 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M480_4248 PF02874 ATP synthase alpha/beta family, beta-barrel domain M480_4249 PF07321 Type III secretion protein YscO M480_425 PF01264 Chorismate synthase M480_4250 PF02120 Flagellar hook-length control protein FliK M480_4251 PF01052 Surface presentation of antigens (SPOA) M480_4252 PF00813 M480_4252 M480_4253 PF01313 M480_4253 M480_4254 PF01311 M480_4254 M480_4255 PF01312 FlhB HrpN YscU SpaS Family M480_4256 PF09619 Type III secretion system lipoprotein chaperone (YscW) M480_4257 PF02311 AraC-like ligand binding domain M480_4257 PF12833 Helix-turn-helix domain M480_4258 PF05932 Tir chaperone protein (CesT) family M480_4259 PF00263 M480_4259 M480_4259 PF03958 Bacterial type II/III secretion system short domain M480_426 PF05175 Methyltransferase small domain M480_4260 PF16693 M480_4260 M480_4260 PF16697 M480_4260 M480_4261 PF08988 Protein of unknown function (DUF1895) M480_4262 PF09392 Type III secretion needle MxiH like M480_4263 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) M480_4264 PF09025 YopR Core M480_4265 PF17001 M480_4265 M480_4266 PF01514 Secretory protein of YscJ/FliF family M480_4267 PF06578 M480_4267 M480_4268 PF02108 M480_4268 M480_4269 PF09013 YopH, N-terminal M480_427 PF01713 Smr domain M480_4270 PF01527 Transposase M480_4272 PF00665 Integrase core domain M480_4272 PF02796 Helix-turn-helix domain of resolvase M480_4274 PF01695 IstB-like ATP binding protein M480_4275 PF13683 M480_4275 M480_4277 PF00102 Protein-tyrosine phosphatase M480_4277 PF09013 YopH, N-terminal M480_4278 PF13683 M480_4278 M480_4279 PF03421 M480_4279 M480_428 PF00300 Histidine phosphatase superfamily (branch 1) M480_4280 PF00069 Protein kinase domain M480_4280 PF09632 Rac1-binding domain M480_4283 PF13683 M480_4283 M480_4286 PF02387 M480_4286 M480_4287 PF10723 Replication regulatory protein RepB M480_4288 PF13276 M480_4288 M480_4289 PF00665 Integrase core domain M480_429 PF00378 Enoyl-CoA hydratase/isomerase family M480_429 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M480_429 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M480_4290 PF01527 Transposase M480_4293 PF03895 YadA-like C-terminal region M480_4293 PF05658 Head domain of trimeric autotransporter adhesin M480_4293 PF05662 Coiled stalk of trimeric autotransporter adhesin M480_4296 PF01526 M480_4296 M480_4296 PF13700 M480_4296 M480_4298 PF00239 Resolvase, N terminal domain M480_4298 PF02796 Helix-turn-helix domain of resolvase M480_43 PF09722 M480_43 M480_430 PF00108 Thiolase, N-terminal domain M480_430 PF02803 Thiolase, C-terminal domain M480_4301 PF01527 Transposase M480_4302 PF13276 M480_4302 M480_4302 PF13683 M480_4302 M480_4303 PF05932 Tir chaperone protein (CesT) family M480_4304 PF01695 IstB-like ATP binding protein M480_4305 PF00665 Integrase core domain M480_4306 PF13683 M480_4306 M480_4307 PF05932 Tir chaperone protein (CesT) family M480_4308 PF03545 Yersinia virulence determinant (YopE) M480_4308 PF09020 YopE, N terminal M480_4309 PF05016 Plasmid stabilisation system protein M480_431 PF04175 Protein of unknown function (DUF406) M480_4310 PF03693 Uncharacterised protein family (UPF0156) M480_4312 PF02195 ParB-like nuclease domain M480_4313 PF00376 MerR family regulatory protein M480_4313 PF13614 AAA domain M480_4314 PF13683 M480_4314 M480_4315 PF13276 M480_4315 M480_4316 PF01527 Transposase M480_4317 PF05818 M480_4317 M480_4319 PF03543 Yersinia/Haemophilus virulence surface antigen M480_432 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M480_4320 PF05932 Tir chaperone protein (CesT) family M480_4323 PF00872 M480_4323 M480_4324 PF12468 Type III secretion system leucine rich repeat protein M480_4326 PF00872 M480_4326 M480_4327 PF00872 M480_4327 M480_4328 PF05844 YopD protein M480_4329 PF04888 M480_4329 M480_433 PF04333 M480_433 M480_4330 PF07720 Tetratricopeptide repeat M480_4331 PF04792 V antigen (LcrV) protein M480_434 PF14559 Tetratricopeptide repeat M480_435 PF03918 Cytochrome C biogenesis protein M480_436 PF08534 Redoxin M480_437 PF01578 M480_437 M480_437 PF16327 M480_437 M480_438 PF03100 CcmE M480_439 PF04995 M480_439 M480_44 PF08808 M480_44 M480_440 PF01578 M480_440 M480_441 PF03379 M480_441 M480_442 PF00005 ABC transporter M480_445 PF04011 LemA family M480_446 PF09972 M480_446 M480_447 PF03831 PhnA protein M480_447 PF08274 PhnA Zinc-Ribbon M480_449 PF04965 Gene 25-like lysozyme M480_45 PF05128 M480_45 M480_450 PF07024 ImpE protein M480_452 PF05488 PAAR motif M480_453 PF05954 Phage late control gene D protein (GPD) M480_454 PF06744 M480_454 M480_454 PF06761 M480_454 M480_455 PF06761 M480_455 M480_455 PF14331 M480_455 M480_456 PF00691 OmpA family M480_456 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M480_457 PF01695 IstB-like ATP binding protein M480_458 PF00665 Integrase core domain M480_458 PF02796 Helix-turn-helix domain of resolvase M480_459 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M480_46 PF04317 M480_46 M480_460 PF05936 M480_460 M480_461 PF12790 Type VI secretion lipoprotein M480_462 PF05638 Protein of unknown function (DUF796) M480_463 PF05943 M480_463 M480_464 PF05591 M480_464 M480_465 PF00419 Fimbrial protein M480_466 PF00577 Outer membrane usher protein M480_466 PF13953 PapC C-terminal domain M480_467 PF00872 M480_467 M480_468 PF00577 Outer membrane usher protein M480_468 PF13954 PapC N-terminal domain M480_469 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_469 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_47 PF09584 M480_47 M480_470 PF16970 M480_470 M480_471 PF00004 ATPase family associated with various cellular activities (AAA) M480_471 PF02861 Clp amino terminal domain M480_471 PF07724 AAA domain (Cdc48 subfamily) M480_471 PF10431 C-terminal, D2-small domain, of ClpB protein M480_472 PF05947 M480_472 M480_473 PF06996 M480_473 M480_474 PF06812 M480_474 M480_475 PF00419 Fimbrial protein M480_476 PF11397 M480_476 M480_478 PF00691 OmpA family M480_479 PF08786 Domain of unknown function (DUF1795) M480_48 PF04024 M480_48 M480_480 PF00196 Bacterial regulatory proteins, luxR family M480_481 PF13406 Transglycosylase SLT domain M480_482 PF13343 Bacterial extracellular solute-binding protein M480_483 PF00528 Binding-protein-dependent transport system inner membrane component M480_484 PF00005 ABC transporter M480_485 PF09900 M480_485 M480_486 PF05638 Protein of unknown function (DUF796) M480_487 PF13988 M480_487 M480_488 PF00384 Molybdopterin oxidoreductase M480_488 PF01568 Molydopterin dinucleotide binding domain M480_488 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M480_489 PF12800 4Fe-4S binding domain M480_489 PF13247 4Fe-4S dicluster domain M480_49 PF06667 M480_49 M480_490 PF04976 M480_490 M480_491 PF02613 Nitrate reductase delta subunit M480_492 PF00037 4Fe-4S binding domain M480_492 PF12838 4Fe-4S dicluster domain M480_493 PF05643 Putative bacterial lipoprotein (DUF799) M480_494 PF16068 M480_494 M480_495 PF03783 Curli production assembly/transport component CsgG M480_496 PF15970 M480_496 M480_497 PF01292 Prokaryotic cytochrome b561 M480_498 PF00155 Aminotransferase class I and II M480_499 PF07350 Protein of unknown function (DUF1479) M480_5 PF00072 Response regulator receiver domain M480_5 PF00486 Transcriptional regulatory protein, C terminal M480_50 PF04012 M480_50 M480_500 PF02685 Glucokinase M480_501 PF05232 M480_501 M480_502 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_502 PF03466 LysR substrate binding domain M480_503 PF00248 Aldo/keto reductase family M480_504 PF10697 M480_504 M480_505 PF01566 M480_505 M480_506 PF01773 Na+ dependent nucleoside transporter N-terminus M480_506 PF07662 Na+ dependent nucleoside transporter C-terminus M480_506 PF07670 Nucleoside recognition M480_51 PF00158 Sigma-54 interaction domain M480_51 PF02954 Bacterial regulatory protein, Fis family M480_511 PF00749 tRNA synthetases class I (E and Q), catalytic domain M480_513 PF01797 Transposase IS200 like M480_514 PF06042 Bacterial protein of unknown function (DUF925) M480_515 PF14282 M480_515 M480_516 PF12843 M480_516 M480_517 PF00533 BRCA1 C Terminus (BRCT) domain M480_517 PF01653 NAD-dependent DNA ligase adenylation domain M480_517 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M480_517 PF03120 NAD-dependent DNA ligase OB-fold domain M480_517 PF12826 Helix-hairpin-helix motif M480_517 PF14520 Helix-hairpin-helix domain M480_518 PF04354 ZipA, C-terminal FtsZ-binding domain M480_519 PF07264 Etoposide-induced protein 2 M480_52 PF01797 Transposase IS200 like M480_520 PF00291 Pyridoxal-phosphate dependent enzyme M480_521 PF00381 PTS HPr component phosphorylation site M480_522 PF00391 PEP-utilising enzyme, mobile domain M480_522 PF02896 PEP-utilising enzyme, TIM barrel domain M480_522 PF05524 PEP-utilising enzyme, N-terminal M480_523 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M480_524 PF01797 Transposase IS200 like M480_526 PF00512 His Kinase A (phospho-acceptor) domain M480_526 PF00672 HAMP domain M480_526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_527 PF00072 Response regulator receiver domain M480_527 PF00486 Transcriptional regulatory protein, C terminal M480_528 PF16576 M480_528 M480_529 PF00005 ABC transporter M480_529 PF02687 M480_529 M480_529 PF12704 MacB-like periplasmic core domain M480_53 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_530 PF00581 Rhodanese-like domain M480_530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M480_530 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_532 PF11755 M480_532 M480_533 PF00557 Metallopeptidase family M24 M480_533 PF01321 Creatinase/Prolidase N-terminal domain M480_534 PF01321 Creatinase/Prolidase N-terminal domain M480_535 PF00155 Aminotransferase class I and II M480_536 PF00092 von Willebrand factor type A domain M480_537 PF00512 His Kinase A (phospho-acceptor) domain M480_537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_538 PF00072 Response regulator receiver domain M480_538 PF00486 Transcriptional regulatory protein, C terminal M480_54 PF00528 Binding-protein-dependent transport system inner membrane component M480_540 PF00291 Pyridoxal-phosphate dependent enzyme M480_541 PF00005 ABC transporter M480_542 PF00528 Binding-protein-dependent transport system inner membrane component M480_543 PF00528 Binding-protein-dependent transport system inner membrane component M480_544 PF13531 Bacterial extracellular solute-binding protein M480_545 PF07690 Major Facilitator Superfamily M480_546 PF01380 SIS domain M480_546 PF01418 Helix-turn-helix domain, rpiR family M480_547 PF04074 Domain of unknown function (DUF386) M480_548 PF00480 ROK family M480_549 PF12468 Type III secretion system leucine rich repeat protein M480_549 PF13855 Leucine rich repeat M480_55 PF00528 Binding-protein-dependent transport system inner membrane component M480_55 PF12911 M480_55 M480_550 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M480_551 PF00701 Dihydrodipicolinate synthetase family M480_552 PF04261 Dyp-type peroxidase family M480_553 PF06572 Protein of unknown function (DUF1131) M480_554 PF06572 Protein of unknown function (DUF1131) M480_555 PF04076 Bacterial OB fold (BOF) protein M480_556 PF03212 Pertactin M480_556 PF03797 Autotransporter beta-domain M480_559 PF00583 Acetyltransferase (GNAT) family M480_56 PF00005 ABC transporter M480_56 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M480_560 PF01218 Coproporphyrinogen III oxidase M480_561 PF02639 M480_561 M480_562 PF00390 Malic enzyme, N-terminal domain M480_562 PF01515 Phosphate acetyl/butaryl transferase M480_562 PF03949 Malic enzyme, NAD binding domain M480_563 PF00293 NUDIX domain M480_564 PF03264 NapC/NirT cytochrome c family, N-terminal region M480_565 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) M480_566 PF00384 Molybdopterin oxidoreductase M480_566 PF01568 Molydopterin dinucleotide binding domain M480_566 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M480_566 PF10518 TAT (twin-arginine translocation) pathway signal sequence M480_567 PF03927 NapD protein M480_568 PF12838 4Fe-4S dicluster domain M480_568 PF13187 4Fe-4S dicluster domain M480_569 PF00072 Response regulator receiver domain M480_569 PF00196 Bacterial regulatory proteins, luxR family M480_57 PF00005 ABC transporter M480_570 PF09904 Winged helix-turn helix M480_571 PF00873 AcrB/AcrD/AcrF family M480_573 PF04307 M480_573 M480_574 PF04055 Radical SAM superfamily M480_574 PF13353 4Fe-4S single cluster domain M480_575 PF00884 Sulfatase M480_576 PF00005 ABC transporter M480_577 PF00528 Binding-protein-dependent transport system inner membrane component M480_578 PF13416 Bacterial extracellular solute-binding protein M480_579 PF12688 Tetratrico peptide repeat M480_580 PF03960 ArsC family M480_581 PF01546 Peptidase family M20/M25/M40 M480_581 PF07687 Peptidase dimerisation domain M480_582 PF02557 D-alanyl-D-alanine carboxypeptidase M480_583 PF13980 M480_583 M480_584 PF05127 Helicase M480_584 PF08351 Domain of unknown function (DUF1726) M480_584 PF13718 GNAT acetyltransferase 2 M480_584 PF17176 M480_584 M480_585 PF04284 M480_585 M480_586 PF04228 M480_586 M480_587 PF01259 SAICAR synthetase M480_588 PF01797 Transposase IS200 like M480_589 PF06804 NlpB/DapX lipoprotein M480_590 PF00701 Dihydrodipicolinate synthetase family M480_591 PF13740 ACT domain M480_592 PF00578 AhpC/TSA family M480_595 PF01594 M480_595 M480_596 PF01435 Peptidase family M48 M480_596 PF07720 Tetratricopeptide repeat M480_596 PF14559 Tetratricopeptide repeat M480_597 PF03960 ArsC family M480_598 PF00308 Bacterial dnaA protein M480_599 PF01797 Transposase IS200 like M480_6 PF00512 His Kinase A (phospho-acceptor) domain M480_6 PF00672 HAMP domain M480_6 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_60 PF00854 POT family M480_600 PF14681 Uracil phosphoribosyltransferase M480_601 PF00586 AIR synthase related protein, N-terminal domain M480_601 PF02769 AIR synthase related protein, C-terminal domain M480_602 PF00551 Formyl transferase M480_603 PF13302 Acetyltransferase (GNAT) domain M480_605 PF03692 M480_605 M480_606 PF00005 ABC transporter M480_607 PF00528 Binding-protein-dependent transport system inner membrane component M480_608 PF00528 Binding-protein-dependent transport system inner membrane component M480_609 PF02503 Polyphosphate kinase middle domain M480_609 PF13089 Polyphosphate kinase N-terminal domain M480_609 PF13090 Polyphosphate kinase C-terminal domain M480_61 PF06930 M480_61 M480_610 PF02541 Ppx/GppA phosphatase family M480_611 PF00571 CBS domain M480_611 PF01769 Divalent cation transporter M480_611 PF03448 MgtE intracellular N domain M480_612 PF00012 Hsp70 protein M480_613 PF00528 Binding-protein-dependent transport system inner membrane component M480_614 PF00528 Binding-protein-dependent transport system inner membrane component M480_615 PF13416 Bacterial extracellular solute-binding protein M480_616 PF00202 Aminotransferase class-III M480_617 PF00155 Aminotransferase class I and II M480_617 PF00392 Bacterial regulatory proteins, gntR family M480_618 PF00005 ABC transporter M480_618 PF08402 TOBE domain M480_619 PF13437 HlyD family secretion protein M480_619 PF13533 Biotin-lipoyl like M480_62 PF11656 M480_62 M480_620 PF00873 AcrB/AcrD/AcrF family M480_621 PF00873 AcrB/AcrD/AcrF family M480_622 PF00873 AcrB/AcrD/AcrF family M480_623 PF07690 Major Facilitator Superfamily M480_624 PF00512 His Kinase A (phospho-acceptor) domain M480_624 PF00672 HAMP domain M480_624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_625 PF00072 Response regulator receiver domain M480_625 PF00486 Transcriptional regulatory protein, C terminal M480_626 PF07411 Domain of unknown function (DUF1508) M480_627 PF01136 M480_627 M480_627 PF16325 M480_627 M480_628 PF00781 Diacylglycerol kinase catalytic domain M480_629 PF08816 Inhibitor of vertebrate lysozyme (Ivy) M480_63 PF00043 Glutathione S-transferase, C-terminal domain M480_63 PF02798 Glutathione S-transferase, N-terminal domain M480_631 PF08543 Phosphomethylpyrimidine kinase M480_632 PF06092 M480_632 M480_634 PF00872 M480_634 M480_636 PF06836 M480_636 M480_637 PF06836 M480_637 M480_638 PF06836 M480_638 M480_64 PF08543 Phosphomethylpyrimidine kinase M480_640 PF05638 Protein of unknown function (DUF796) M480_641 PF00117 Glutamine amidotransferase class-I M480_641 PF00958 GMP synthase C terminal domain M480_641 PF02540 NAD synthase M480_642 PF00478 IMP dehydrogenase / GMP reductase domain M480_642 PF00571 CBS domain M480_643 PF02601 M480_643 M480_643 PF13742 M480_643 M480_644 PF07191 zinc-ribbons M480_645 PF03547 M480_645 M480_646 PF01926 50S ribosome-binding GTPase M480_646 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M480_647 PF13360 PQQ-like domain M480_648 PF09976 Tetratricopeptide repeat M480_649 PF03129 Anticodon binding domain M480_649 PF13393 Histidyl-tRNA synthetase M480_65 PF00579 tRNA synthetases class I (W and Y) M480_65 PF01479 S4 domain M480_650 PF04551 GcpE protein M480_651 PF13413 Helix-turn-helix domain M480_651 PF13464 M480_651 M480_652 PF13181 Tetratricopeptide repeat M480_652 PF13431 Tetratricopeptide repeat M480_653 PF04055 Radical SAM superfamily M480_654 PF00334 Nucleoside diphosphate kinase M480_655 PF00030 Beta/Gamma crystallin M480_655 PF08964 Beta/Gamma crystallin M480_655 PF09101 Exotoxin A binding M480_656 PF03212 Pertactin M480_656 PF03797 Autotransporter beta-domain M480_657 PF03212 Pertactin M480_657 PF03797 Autotransporter beta-domain M480_658 PF03797 Autotransporter beta-domain M480_659 PF07179 M480_659 M480_659 PF14581 M480_659 M480_66 PF01243 Pyridoxamine 5'-phosphate oxidase M480_66 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M480_660 PF00883 Cytosol aminopeptidase family, catalytic domain M480_660 PF12404 M480_660 M480_661 PF04384 Iron-sulphur cluster assembly M480_662 PF00111 2Fe-2S iron-sulfur cluster binding domain M480_663 PF00012 Hsp70 protein M480_664 PF00226 DnaJ domain M480_664 PF07743 HSCB C-terminal oligomerisation domain M480_665 PF01521 Iron-sulphur cluster biosynthesis M480_666 PF01592 NifU-like N terminal domain M480_667 PF00266 Aminotransferase class-V M480_668 PF02082 Transcriptional regulator M480_669 PF00588 SpoU rRNA Methylase family M480_67 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme M480_670 PF00459 Inositol monophosphatase family M480_671 PF03824 M480_671 M480_672 PF06226 M480_672 M480_673 PF12832 MFS_1 like family M480_674 PF00874 PRD domain M480_675 PF13505 Outer membrane protein beta-barrel domain M480_676 PF00464 Serine hydroxymethyltransferase M480_677 PF00042 Globin M480_677 PF00175 Oxidoreductase NAD-binding domain M480_677 PF00970 Oxidoreductase FAD-binding domain M480_678 PF00665 Integrase core domain M480_678 PF02796 Helix-turn-helix domain of resolvase M480_679 PF01695 IstB-like ATP binding protein M480_68 PF03702 Uncharacterised protein family (UPF0075) M480_680 PF14502 Helix-turn-helix domain M480_680 PF14503 YhfZ C-terminal domain M480_681 PF00543 Nitrogen regulatory protein P-II M480_682 PF00795 Carbon-nitrogen hydrolase M480_682 PF02540 NAD synthase M480_683 PF00072 Response regulator receiver domain M480_683 PF00158 Sigma-54 interaction domain M480_684 PF13942 M480_684 M480_685 PF00512 His Kinase A (phospho-acceptor) domain M480_685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_686 PF01797 Transposase IS200 like M480_69 PF05433 M480_69 M480_690 PF02769 AIR synthase related protein, C-terminal domain M480_690 PF13507 CobB/CobQ-like glutamine amidotransferase domain M480_691 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_691 PF01464 Transglycosylase SLT domain M480_692 PF14437 M480_692 M480_693 PF12710 haloacid dehalogenase-like hydrolase M480_694 PF01380 SIS domain M480_695 PF01380 SIS domain M480_695 PF01418 Helix-turn-helix domain, rpiR family M480_696 PF12838 4Fe-4S dicluster domain M480_698 PF03886 Protein of unknown function (DUF330) M480_699 PF02470 M480_699 M480_7 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M480_70 PF00248 Aldo/keto reductase family M480_700 PF04403 M480_700 M480_701 PF00005 ABC transporter M480_701 PF12848 ABC transporter M480_701 PF16326 M480_701 M480_702 PF01170 Putative RNA methylase family UPF0020 M480_702 PF02926 THUMP domain M480_702 PF10672 S-adenosylmethionine-dependent methyltransferase M480_703 PF00111 2Fe-2S iron-sulfur cluster binding domain M480_703 PF03473 MOSC domain M480_703 PF03476 MOSC N-terminal beta barrel domain M480_704 PF07126 M480_704 M480_705 PF01180 Dihydroorotate dehydrogenase M480_706 PF01433 Peptidase family M1 M480_706 PF11940 Domain of unknown function (DUF3458) M480_706 PF17432 M480_706 M480_707 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M480_708 PF00152 tRNA synthetases class II (D, K and N) M480_708 PF01336 OB-fold nucleic acid binding domain M480_709 PF00267 Gram-negative porin M480_71 PF06945 M480_71 M480_710 PF00155 Aminotransferase class I and II M480_711 PF00753 Metallo-beta-lactamase superfamily M480_712 PF05951 M480_712 M480_713 PF01471 Putative peptidoglycan binding domain M480_713 PF03734 L,D-transpeptidase catalytic domain M480_714 PF01797 Transposase IS200 like M480_715 PF04310 MukB N-terminal M480_715 PF13558 Putative exonuclease SbcCD, C subunit M480_715 PF16330 M480_715 M480_716 PF04288 MukE-like family M480_717 PF03882 KicB killing factor M480_717 PF17192 M480_717 M480_717 PF17193 M480_717 M480_718 PF13847 Methyltransferase domain M480_719 PF03881 Fructosamine kinase M480_72 PF00884 Sulfatase M480_72 PF08019 M480_72 M480_720 PF02348 Cytidylyltransferase M480_721 PF03966 Trm112p-like protein M480_722 PF00313 'Cold-shock' DNA-binding domain M480_723 PF07063 Domain of unknown function (DUF1338) M480_724 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M480_725 PF00005 ABC transporter M480_725 PF00664 ABC transporter transmembrane region M480_726 PF00753 Metallo-beta-lactamase superfamily M480_726 PF03772 M480_726 M480_726 PF13567 M480_726 M480_727 PF00216 Bacterial DNA-binding protein M480_729 PF00575 S1 RNA binding domain M480_73 PF00440 Bacterial regulatory proteins, tetR family M480_73 PF16925 M480_73 M480_730 PF02224 Cytidylate kinase M480_731 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M480_732 PF00266 Aminotransferase class-V M480_733 PF03895 YadA-like C-terminal region M480_734 PF03895 YadA-like C-terminal region M480_735 PF00710 Asparaginase M480_736 PF02624 YcaO-like family M480_737 PF01226 Formate/nitrite transporter M480_738 PF01228 Glycine radical M480_738 PF02901 Pyruvate formate lyase M480_739 PF01755 M480_739 M480_74 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M480_740 PF04055 Radical SAM superfamily M480_740 PF13353 4Fe-4S single cluster domain M480_741 PF07690 Major Facilitator Superfamily M480_742 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M480_742 PF02403 Seryl-tRNA synthetase N-terminal domain M480_743 PF00004 ATPase family associated with various cellular activities (AAA) M480_743 PF12002 MgsA AAA+ ATPase C terminal M480_743 PF16193 M480_743 M480_745 PF03548 Outer membrane lipoprotein carrier protein LolA M480_746 PF01580 FtsK/SpoIIIE family M480_746 PF09397 Ftsk gamma domain M480_746 PF13491 M480_746 M480_747 PF01037 AsnC family M480_747 PF13412 Winged helix-turn-helix DNA-binding M480_748 PF07992 Pyridine nucleotide-disulphide oxidoreductase M480_749 PF00005 ABC transporter M480_749 PF00664 ABC transporter transmembrane region M480_750 PF00005 ABC transporter M480_750 PF00664 ABC transporter transmembrane region M480_751 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M480_752 PF01176 Translation initiation factor 1A / IF-1 M480_753 PF01797 Transposase IS200 like M480_754 PF00004 ATPase family associated with various cellular activities (AAA) M480_754 PF02861 Clp amino terminal domain M480_754 PF07724 AAA domain (Cdc48 subfamily) M480_754 PF10431 C-terminal, D2-small domain, of ClpB protein M480_755 PF02617 ATP-dependent Clp protease adaptor protein ClpS M480_756 PF00313 'Cold-shock' DNA-binding domain M480_757 PF00005 ABC transporter M480_757 PF02687 M480_757 M480_757 PF12704 MacB-like periplasmic core domain M480_758 PF16576 M480_758 M480_759 PF04393 M480_759 M480_76 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M480_760 PF11398 Protein of unknown function (DUF2813) M480_761 PF03956 M480_761 M480_762 PF03063 Prismane/CO dehydrogenase family M480_763 PF00111 2Fe-2S iron-sulfur cluster binding domain M480_763 PF00175 Oxidoreductase NAD-binding domain M480_763 PF00970 Oxidoreductase FAD-binding domain M480_764 PF00205 Thiamine pyrophosphate enzyme, central domain M480_764 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M480_764 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M480_765 PF01212 Beta-eliminating lyase M480_766 PF11066 M480_766 M480_766 PF13460 NADH(P)-binding M480_767 PF01370 NAD dependent epimerase/dehydratase family M480_768 PF12883 Protein of unknown function (DUF3828) M480_769 PF01817 Chorismate mutase type II M480_77 PF00929 Exonuclease M480_770 PF00005 ABC transporter M480_771 PF00497 Bacterial extracellular solute-binding proteins, family 3 M480_772 PF00528 Binding-protein-dependent transport system inner membrane component M480_773 PF00528 Binding-protein-dependent transport system inner membrane component M480_774 PF00892 EamA-like transporter family M480_775 PF10100 M480_775 M480_776 PF03059 Nicotianamine synthase protein M480_777 PF00005 ABC transporter M480_778 PF01032 FecCD transport family M480_78 PF00462 Glutaredoxin M480_780 PF01497 Periplasmic binding protein M480_781 PF01145 SPFH domain / Band 7 family M480_784 PF10767 M480_784 M480_785 PF00528 Binding-protein-dependent transport system inner membrane component M480_786 PF00528 Binding-protein-dependent transport system inner membrane component M480_787 PF00005 ABC transporter M480_787 PF08402 TOBE domain M480_788 PF13416 Bacterial extracellular solute-binding protein M480_789 PF10722 Putative bacterial sensory transduction regulator M480_790 PF07214 M480_790 M480_791 PF00462 Glutaredoxin M480_792 PF02080 TrkA-C domain M480_792 PF06826 M480_792 M480_793 PF01569 PAP2 superfamily M480_794 PF01569 PAP2 superfamily M480_795 PF01791 DeoC/LacD family aldolase M480_796 PF00455 M480_796 M480_796 PF08220 DeoR-like helix-turn-helix domain M480_797 PF03222 Tryptophan/tyrosine permease family M480_798 PF00768 D-alanyl-D-alanine carboxypeptidase M480_798 PF07943 Penicillin-binding protein 5, C-terminal domain M480_799 PF00528 Binding-protein-dependent transport system inner membrane component M480_8 PF01797 Transposase IS200 like M480_80 PF00877 NlpC/P60 family M480_800 PF00005 ABC transporter M480_800 PF09383 NIL domain M480_801 PF03180 NLPA lipoprotein M480_802 PF03171 2OG-Fe(II) oxygenase superfamily M480_802 PF14226 non-haem dioxygenase in morphine synthesis N-terminal M480_803 PF12710 haloacid dehalogenase-like hydrolase M480_804 PF00043 Glutathione S-transferase, C-terminal domain M480_804 PF13417 Glutathione S-transferase, N-terminal domain M480_805 PF00593 TonB dependent receptor M480_805 PF07715 TonB-dependent Receptor Plug Domain M480_806 PF00005 ABC transporter M480_807 PF01032 FecCD transport family M480_808 PF01497 Periplasmic binding protein M480_809 PF01797 Transposase IS200 like M480_81 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M480_81 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M480_810 PF00324 Amino acid permease M480_812 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_812 PF03466 LysR substrate binding domain M480_813 PF03601 M480_813 M480_814 PF01261 Xylose isomerase-like TIM barrel M480_815 PF00577 Outer membrane usher protein M480_815 PF13953 PapC C-terminal domain M480_815 PF13954 PapC N-terminal domain M480_816 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M480_816 PF02753 Pili assembly chaperone PapD, C-terminal domain M480_818 PF17550 M480_818 M480_819 PF00486 Transcriptional regulatory protein, C terminal M480_820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M480_820 PF02378 Phosphotransferase system, EIIC M480_821 PF00294 pfkB family carbohydrate kinase M480_822 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M480_822 PF00381 PTS HPr component phosphorylation site M480_823 PF00293 NUDIX domain M480_824 PF02653 M480_824 M480_825 PF00005 ABC transporter M480_826 PF13407 Periplasmic binding protein domain M480_827 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M480_828 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M480_828 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M480_829 PF00171 Aldehyde dehydrogenase family M480_83 PF00356 Bacterial regulatory proteins, lacI family M480_83 PF13377 Periplasmic binding protein-like domain M480_830 PF01557 Fumarylacetoacetate (FAA) hydrolase family M480_831 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M480_831 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M480_832 PF13561 Enoyl-(Acyl carrier protein) reductase M480_833 PF03692 M480_833 M480_834 PF03222 Tryptophan/tyrosine permease family M480_835 PF01132 Elongation factor P (EF-P) OB domain M480_835 PF08207 Elongation factor P (EF-P) KOW-like domain M480_835 PF09285 Elongation factor P, C-terminal M480_836 PF03786 D-mannonate dehydratase (UxuA) M480_837 PF01232 Mannitol dehydrogenase Rossmann domain M480_837 PF08125 Mannitol dehydrogenase C-terminal domain M480_838 PF00392 Bacterial regulatory proteins, gntR family M480_838 PF07729 FCD domain M480_84 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_84 PF03466 LysR substrate binding domain M480_840 PF02492 CobW/HypB/UreG, nucleotide-binding domain M480_840 PF07683 Cobalamin synthesis protein cobW C-terminal domain M480_841 PF01569 PAP2 superfamily M480_842 PF00877 NlpC/P60 family M480_844 PF00563 EAL domain M480_844 PF12792 M480_844 M480_845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M480_846 PF00528 Binding-protein-dependent transport system inner membrane component M480_847 PF00528 Binding-protein-dependent transport system inner membrane component M480_847 PF12911 M480_847 M480_848 PF00005 ABC transporter M480_848 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M480_849 PF13989 M480_849 M480_85 PF07690 Major Facilitator Superfamily M480_850 PF07690 Major Facilitator Superfamily M480_851 PF00849 RNA pseudouridylate synthase M480_851 PF01479 S4 domain M480_852 PF00271 Helicase conserved C-terminal domain M480_852 PF04851 Type III restriction enzyme, res subunit M480_853 PF01386 Ribosomal L25p family M480_854 PF01797 Transposase IS200 like M480_855 PF04245 M480_855 M480_856 PF07208 Protein of unknown function (DUF1414) M480_857 PF00884 Sulfatase M480_857 PF11893 M480_857 M480_86 PF02353 Mycolic acid cyclopropane synthetase M480_860 PF12639 DNase/tRNase domain of colicin-like bacteriocin M480_864 PF00232 Glycosyl hydrolase family 1 M480_866 PF01380 SIS domain M480_866 PF01418 Helix-turn-helix domain, rpiR family M480_867 PF07484 Phage Tail Collar Domain M480_868 PF10076 M480_868 M480_869 PF10076 M480_869 M480_87 PF00677 Lumazine binding domain M480_870 PF04865 M480_870 M480_871 PF07409 M480_871 M480_872 PF06890 Bacteriophage Mu Gp45 protein M480_873 PF06890 Bacteriophage Mu Gp45 protein M480_874 PF05954 Phage late control gene D protein (GPD) M480_875 PF07157 M480_875 M480_877 PF10109 M480_877 M480_878 PF10618 M480_878 M480_879 PF04984 Phage tail sheath protein M480_879 PF17482 M480_879 M480_88 PF01554 MatE M480_880 PF10948 M480_880 M480_883 PF01261 Xylose isomerase-like TIM barrel M480_884 PF00455 M480_884 M480_884 PF08220 DeoR-like helix-turn-helix domain M480_885 PF00596 Class II Aldolase and Adducin N-terminal domain M480_886 PF07005 Protein of unknown function, DUF1537 M480_886 PF17042 M480_886 M480_887 PF06530 M480_887 M480_888 PF00717 Peptidase S24-like M480_888 PF01381 Helix-turn-helix M480_889 PF06183 DinI-like family M480_891 PF01278 Omptin family M480_892 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M480_892 PF00672 HAMP domain M480_892 PF02743 Cache domain M480_893 PF12706 Beta-lactamase superfamily domain M480_894 PF13347 MFS/sugar transport protein M480_895 PF00144 Beta-lactamase M480_898 PF00267 Gram-negative porin M480_9 PF03497 Anthrax toxin LF subunit M480_900 PF07690 Major Facilitator Superfamily M480_902 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_903 PF01627 Hpt domain M480_903 PF16359 M480_903 M480_904 PF00072 Response regulator receiver domain M480_904 PF00196 Bacterial regulatory proteins, luxR family M480_905 PF00072 Response regulator receiver domain M480_905 PF00512 His Kinase A (phospho-acceptor) domain M480_905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M480_905 PF09456 RcsC Alpha-Beta-Loop (ABL) M480_906 PF00521 DNA gyrase/topoisomerase IV, subunit A M480_906 PF03989 DNA gyrase C-terminal domain, beta-propeller M480_907 PF13489 Methyltransferase domain M480_908 PF00317 Ribonucleotide reductase, all-alpha domain M480_908 PF02867 Ribonucleotide reductase, barrel domain M480_908 PF03477 ATP cone domain M480_909 PF00268 Ribonucleotide reductase, small chain M480_91 PF00224 Pyruvate kinase, barrel domain M480_91 PF02887 Pyruvate kinase, alpha/beta domain M480_910 PF00111 2Fe-2S iron-sulfur cluster binding domain M480_911 PF03974 Ecotin M480_912 PF00994 Probable molybdopterin binding domain M480_913 PF03222 Tryptophan/tyrosine permease family M480_914 PF07437 M480_914 M480_915 PF00199 Catalase M480_915 PF06628 Catalase-related immune-responsive M480_916 PF06733 DEAD_2 M480_916 PF13307 Helicase C-terminal domain M480_917 PF00267 Gram-negative porin M480_918 PF00892 EamA-like transporter family M480_92 PF04728 Lipoprotein leucine-zipper M480_920 PF01276 Orn/Lys/Arg decarboxylase, major domain M480_920 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M480_921 PF00872 M480_921 M480_922 PF01276 Orn/Lys/Arg decarboxylase, major domain M480_922 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M480_923 PF13520 Amino acid permease M480_924 PF00528 Binding-protein-dependent transport system inner membrane component M480_925 PF00005 ABC transporter M480_926 PF00528 Binding-protein-dependent transport system inner membrane component M480_927 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M480_928 PF00581 Rhodanese-like domain M480_929 PF00282 Pyridoxal-dependent decarboxylase conserved domain M480_93 PF01797 Transposase IS200 like M480_930 PF13640 2OG-Fe(II) oxygenase superfamily M480_931 PF00005 ABC transporter M480_932 PF00005 ABC transporter M480_932 PF12399 Branched-chain amino acid ATP-binding cassette transporter M480_933 PF02653 M480_933 M480_934 PF02653 M480_934 M480_934 PF13646 HEAT repeats M480_935 PF13433 Periplasmic binding protein domain M480_936 PF07308 M480_936 M480_937 PF00528 Binding-protein-dependent transport system inner membrane component M480_938 PF00528 Binding-protein-dependent transport system inner membrane component M480_939 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein M480_94 PF00665 Integrase core domain M480_94 PF02796 Helix-turn-helix domain of resolvase M480_940 PF00005 ABC transporter M480_941 PF04226 M480_941 M480_942 PF05076 Suppressor of fused protein (SUFU) M480_943 PF01844 HNH endonuclease M480_944 PF01928 CYTH domain M480_945 PF01565 FAD binding domain M480_945 PF09330 D-lactate dehydrogenase, membrane binding M480_946 PF00768 D-alanyl-D-alanine carboxypeptidase M480_948 PF01207 Dihydrouridine synthase (Dus) M480_95 PF01695 IstB-like ATP binding protein M480_950 PF01797 Transposase IS200 like M480_951 PF03825 M480_951 M480_952 PF01048 Phosphorylase superfamily M480_953 PF00892 EamA-like transporter family M480_954 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_954 PF03466 LysR substrate binding domain M480_955 PF02028 BCCT family transporter M480_956 PF00440 Bacterial regulatory proteins, tetR family M480_956 PF13977 Bacterial transcriptional repressor M480_957 PF00171 Aldehyde dehydrogenase family M480_958 PF00732 GMC oxidoreductase M480_958 PF05199 GMC oxidoreductase M480_959 PF01797 Transposase IS200 like M480_96 PF03734 L,D-transpeptidase catalytic domain M480_960 PF01027 Inhibitor of apoptosis-promoting Bax1 M480_961 PF02391 MoaE protein M480_962 PF02597 ThiS family M480_963 PF01967 MoaC family M480_964 PF04055 Radical SAM superfamily M480_964 PF06463 Molybdenum Cofactor Synthesis C M480_964 PF13353 4Fe-4S single cluster domain M480_966 PF01933 Uncharacterised protein family UPF0052 M480_967 PF09905 Uncharacterized conserved protein (DUF2132) M480_968 PF00271 Helicase conserved C-terminal domain M480_968 PF02151 UvrB/uvrC motif M480_968 PF04851 Type III restriction enzyme, res subunit M480_968 PF12344 Ultra-violet resistance protein B M480_969 PF00005 ABC transporter M480_97 PF02657 Fe-S metabolism associated domain M480_970 PF13500 AAA domain M480_971 PF08241 Methyltransferase domain M480_972 PF00155 Aminotransferase class I and II M480_973 PF04055 Radical SAM superfamily M480_973 PF06968 Biotin and Thiamin Synthesis associated domain M480_974 PF00202 Aminotransferase class-III M480_975 PF10282 Lactonase, 7-bladed beta-propeller M480_976 PF08282 haloacid dehalogenase-like hydrolase M480_977 PF00005 ABC transporter M480_977 PF03459 TOBE domain M480_978 PF00528 Binding-protein-dependent transport system inner membrane component M480_979 PF13531 Bacterial extracellular solute-binding protein M480_98 PF00266 Aminotransferase class-V M480_980 PF10766 Protein of unknown function (DUF2592) M480_981 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M480_981 PF03459 TOBE domain M480_982 PF00005 ABC transporter M480_985 PF02517 CAAX protease self-immunity M480_986 PF16363 M480_986 M480_987 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M480_987 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M480_988 PF00288 GHMP kinases N terminal domain M480_988 PF08544 GHMP kinases C terminal M480_988 PF10509 Galactokinase galactose-binding signature M480_99 PF01458 Uncharacterized protein family (UPF0051) M480_990 PF01263 Aldose 1-epimerase M480_991 PF07769 M480_991 M480_992 PF00300 Histidine phosphatase superfamily (branch 1) M480_993 PF00793 DAHP synthetase I family M480_994 PF00793 DAHP synthetase I family M480_995 PF01545 Cation efflux family M480_996 PF04973 M480_996 M480_997 PF02445 Quinolinate synthetase A protein