locus-tag	class	description
LDH65_00010	COG0592	DNA-directed DNA polymerase activity
LDH65_00025	COG0187	DNA topoisomerase II activity
LDH65_00030	COG0561	phosphatase activity
LDH65_00040	COG2423	ornithine cyclodeaminase activity
LDH65_00045	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LDH65_00055	COG5645	(Lipo)protein
LDH65_00075	COG3977	Valine--pyruvate aminotransferase
LDH65_00085	COG0366	Alpha amylase catalytic
LDH65_00100	COG2885	chlorophyll binding
LDH65_00110	COG2818	Glycosylase
LDH65_00130	COG2213	PTS system mannitol-specific
LDH65_00130	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LDH65_00140	COG3722	fumarate hydratase activity
LDH65_00165	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LDH65_00180	COG0437	4 iron, 4 sulfur cluster binding
LDH65_00185	COG2864	formate dehydrogenase
LDH65_00200	COG3276	selenocysteine insertion sequence binding
LDH65_00245	COG3274	enterobacterial common antigen metabolic process
LDH65_00260	COG3188	usher protein
LDH65_00265	COG3121	Chaperone
LDH65_00275	COG1070	Carbohydrate kinase
LDH65_00285	COG4213	ABC transporter substrate-binding protein
LDH65_00295	COG4214	carbohydrate transport
LDH65_00300	COG1609	Transcriptional regulator
LDH65_00300	COG2207	Transcriptional regulator
LDH65_00310	COG0582	viral genome integration into host DNA
LDH65_00355	COG4604	ABC transporter, ATP-binding protein
LDH65_00360	COG4605	iron ion homeostasis
LDH65_00370	COG4607	ABC-type enterochelin transport system periplasmic component
LDH65_00400	COG2986	histidine ammonia-lyase
LDH65_00415	COG2194	sulfuric ester hydrolase activity
LDH65_00420	COG2197	response regulator
LDH65_00445	COG2271	Major facilitator Superfamily
LDH65_00465	COG2831	hemolysin activation secretion protein
LDH65_00470	COG0747	negative chemotaxis
LDH65_00480	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LDH65_00485	COG0444	Belongs to the ABC transporter superfamily
LDH65_00490	COG4608	Belongs to the ABC transporter superfamily
LDH65_00500	COG2200	EAL domain
LDH65_00500	COG2199	diguanylate cyclase activity
LDH65_00505	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LDH65_00525	COG0612	Peptidase, M16
LDH65_00530	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDH65_00535	COG1942	4-Oxalocrotonate Tautomerase
LDH65_00540	COG2200	EAL domain
LDH65_00545	COG2982	Protein involved in outer membrane biogenesis
LDH65_00550	COG2134	cdp-diacylglycerol pyrophosphatase
LDH65_00555	COG1295	ribonuclease BN
LDH65_00580	COG1929	Belongs to the glycerate kinase type-1 family
LDH65_00585	COG2610	gluconate transmembrane transporter activity
LDH65_00595	COG3835	regulator
LDH65_00600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDH65_00605	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LDH65_00610	COG0339	signal peptide processing
LDH65_00630	COG0589	response to stress
LDH65_00645	COG0306	phosphate transporter
LDH65_00650	COG2081	HI0933 family
LDH65_00665	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_00680	COG0191	fructose-bisphosphate aldolase activity
LDH65_00700	COG1741	Belongs to the pirin family
LDH65_00705	COG1609	Transcriptional regulator
LDH65_00710	COG2610	gluconate transmembrane transporter activity
LDH65_00715	COG3265	gluconokinase activity
LDH65_00735	COG2095	MarC family integral membrane protein
LDH65_00740	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LDH65_00775	COG3275	phosphorelay sensor kinase activity
LDH65_00800	COG0058	SHG alpha-glucan phosphorylase activity
LDH65_00805	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LDH65_00850	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LDH65_00865	COG1629	transport
LDH65_00890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDH65_00895	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LDH65_00895	COG0678	peroxiredoxin activity
LDH65_00965	COG1879	ABC-type sugar transport system periplasmic component
LDH65_00970	COG1129	ABC transporter
LDH65_00975	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_00980	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_00990	COG3085	chromosome segregation
LDH65_01010	COG3978	acetolactate synthase activity
LDH65_01015	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LDH65_01055	COG0583	DNA-binding transcription factor activity
LDH65_01090	COG3121	Chaperone
LDH65_01105	COG3121	Chaperone
LDH65_01115	COG3328	transposase activity
LDH65_01125	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LDH65_01150	COG3118	belongs to the thioredoxin family
LDH65_01155	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LDH65_01160	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LDH65_01165	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LDH65_01170	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LDH65_01175	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LDH65_01180	COG1088	dTDP-glucose 4,6-dehydratase activity
LDH65_01185	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LDH65_01190	COG0456	acetyltransferase
LDH65_01195	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LDH65_01200	COG2244	polysaccharide biosynthetic process
LDH65_01220	COG1113	amino acid transport
LDH65_01250	COG3071	HemY protein
LDH65_01255	COG2959	enzyme of heme biosynthesis
LDH65_01260	COG1587	Uroporphyrinogen-III synthase
LDH65_01275	COG3072	Adenylate cyclase
LDH65_01295	COG3159	Protein conserved in bacteria
LDH65_01300	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LDH65_01305	COG1011	Hydrolase
LDH65_01310	COG0210	DNA helicase
LDH65_01320	COG5441	Belongs to the UPF0261 family
LDH65_01325	COG5564	TIM-barrel signal transduction protein
LDH65_01340	COG2050	protein possibly involved in aromatic compounds catabolism
LDH65_01345	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
LDH65_01350	COG0514	ATP-dependent DNA helicase (RecQ)
LDH65_01355	COG1280	lysine exporter protein (LysE YggA)
LDH65_01360	COG1280	lysine exporter protein (LysE YggA)
LDH65_01365	COG2267	carboxylic ester hydrolase activity
LDH65_01370	COG0561	phosphatase activity
LDH65_01380	COG0584	glycerophosphoryl diester phosphodiesterase
LDH65_01390	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LDH65_01400	COG0247	lactate metabolic process
LDH65_01410	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LDH65_01425	COG3714	YhhN family
LDH65_01440	COG3776	membrane
LDH65_01445	COG0742	ribosomal rna small subunit methyltransferase
LDH65_01450	COG0552	protein localization to endoplasmic reticulum
LDH65_01450	COG0552	protein localization to endoplasmic reticulum
LDH65_01455	COG2884	Cell division ATP-binding protein ftsE
LDH65_01460	COG2177	Part of the ABC transporter FtsEX involved in
LDH65_01480	COG0683	leucine binding
LDH65_01490	COG4177	L-phenylalanine transmembrane transporter activity
LDH65_01500	COG0410	ABC transporter
LDH65_01560	COG0584	glycerophosphoryl diester phosphodiesterase
LDH65_01565	COG0679	Auxin Efflux Carrier
LDH65_01570	COG0697	spore germination
LDH65_01575	COG0583	DNA-binding transcription factor activity
LDH65_01585	COG0412	Dienelactone hydrolase
LDH65_01600	COG1966	Carbon starvation protein
LDH65_01605	COG0586	Pfam SNARE associated Golgi protein
LDH65_01610	COG1322	Protein conserved in bacteria
LDH65_01630	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LDH65_01640	COG0805	protein transport
LDH65_01675	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LDH65_01700	COG1739	Uncharacterized protein family UPF0029
LDH65_01715	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LDH65_01720	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
LDH65_01750	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LDH65_01810	COG0250	Participates in transcription elongation, termination and antitermination
LDH65_01865	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LDH65_01900	COG1515	deoxyribonuclease V activity
LDH65_01920	COG0151	Belongs to the GarS family
LDH65_01970	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LDH65_01975	COG2224	Isocitrate lyase
LDH65_02010	COG0527	aspartate kinase activity
LDH65_02025	COG3833	ABC-type maltose transport systems, permease component
LDH65_02030	COG1175	transmembrane transport
LDH65_02115	COG0195	Participates in both transcription termination and antitermination
LDH65_02135	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LDH65_02145	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LDH65_02160	COG1534	Rna-binding protein
LDH65_02170	COG2027	D-alanyl-D-alanine carboxypeptidase
LDH65_02175	COG0745	RESPONSE REGULATOR receiver
LDH65_02180	COG0642	Histidine kinase
LDH65_02190	COG0697	spore germination
LDH65_02205	COG0142	geranyltranstransferase activity
LDH65_02225	COG3423	Transcriptional regulator
LDH65_02245	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LDH65_02250	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
LDH65_02255	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LDH65_02260	COG2105	PFAM AIG2 family protein
LDH65_02265	COG2911	Protein conserved in bacteria
LDH65_02270	COG0729	surface antigen
LDH65_02280	COG1253	flavin adenine dinucleotide binding
LDH65_02290	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
LDH65_02300	COG0737	Belongs to the 5'-nucleotidase family
LDH65_02310	COG0545	Peptidyl-prolyl cis-trans isomerase
LDH65_02315	COG3061	Opacity-associated protein A
LDH65_02335	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LDH65_02345	COG0360	Binds together with S18 to 16S ribosomal RNA
LDH65_02350	COG1073	alpha beta
LDH65_02370	COG0583	DNA-binding transcription factor activity
LDH65_02375	COG1741	Belongs to the pirin family
LDH65_02385	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LDH65_02405	COG2823	Periplasmic or secreted lipoprotein
LDH65_02415	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
LDH65_02420	COG5002	protein histidine kinase activity
LDH65_02420	COG2198	Histidine kinase
LDH65_02420	COG0784	Response regulator, receiver
LDH65_02425	COG1242	4 iron, 4 sulfur cluster binding
LDH65_02430	COG0067	glutamate synthase
LDH65_02430	COG0070	glutamate synthase
LDH65_02430	COG0069	glutamate synthase activity
LDH65_02435	COG0493	'glutamate synthase
LDH65_02445	COG2969	positive regulation of protein catabolic process
LDH65_02450	COG0625	glutathione transferase activity
LDH65_02470	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LDH65_02475	COG3105	Protein conserved in bacteria
LDH65_02480	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LDH65_02490	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LDH65_02500	COG5007	Belongs to the BolA IbaG family
LDH65_02505	COG3113	response to antibiotic
LDH65_02510	COG2854	intermembrane phospholipid transfer
LDH65_02515	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LDH65_02520	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LDH65_02525	COG1127	ABC transporter
LDH65_02530	COG0530	calcium, potassium:sodium antiporter activity
LDH65_02535	COG0517	IMP dehydrogenase activity
LDH65_02535	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LDH65_02540	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LDH65_02545	COG3117	lipopolysaccharide transmembrane transporter activity
LDH65_02550	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LDH65_02555	COG1137	ATPase activity
LDH65_02560	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LDH65_02580	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LDH65_02605	COG1609	Transcriptional regulator
LDH65_02610	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LDH65_02610	COG1263	PTS System
LDH65_02615	COG0366	Alpha amylase catalytic
LDH65_02620	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LDH65_02625	COG3783	Cytochrome b(562)
LDH65_02635	COG0312	modulator of DNA gyrase
LDH65_02645	COG2732	(Barnase) inhibitor
LDH65_02675	COG0583	DNA-binding transcription factor activity
LDH65_02735	COG0312	modulator of DNA gyrase
LDH65_02740	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDH65_02745	COG3164	Protein of unknown function
LDH65_02750	COG1530	ribonuclease E activity
LDH65_02755	COG0424	maF-like protein
LDH65_02760	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LDH65_02765	COG1792	Involved in formation and maintenance of cell shape
LDH65_02770	COG1077	Cell shape determining protein MreB Mrl
LDH65_02775	COG2200	EAL domain
LDH65_02775	COG2199	diguanylate cyclase activity
LDH65_02780	COG0604	alcohol dehydrogenase
LDH65_02785	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LDH65_02800	COG0511	ligase activity, forming carbon-carbon bonds
LDH65_02805	COG0439	Biotin carboxylase
LDH65_02815	COG3924	membrane
LDH65_02820	COG4145	pantothenate transmembrane transporter activity
LDH65_02830	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDH65_02835	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LDH65_02865	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LDH65_02875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LDH65_02880	COG3133	Outer membrane lipoprotein
LDH65_02885	COG1278	Cold shock
LDH65_02890	COG1278	Cold shock
LDH65_02910	COG0625	glutathione transferase activity
LDH65_02920	COG1069	ribulokinase activity
LDH65_02930	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_02935	COG1129	ABC transporter
LDH65_02945	COG1560	Kdo2-lipid A biosynthetic process
LDH65_02955	COG0025	NhaP-type Na H and K H
LDH65_02960	COG2252	PERMEase
LDH65_02965	COG3077	Addiction module antitoxin, RelB DinJ family
LDH65_02985	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LDH65_02995	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LDH65_03000	COG0431	NADPH-dependent FMN reductase
LDH65_03005	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LDH65_03010	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDH65_03015	COG1869	D-ribose catabolic process
LDH65_03020	COG1917	Cupin 2, conserved barrel domain protein
LDH65_03020	COG2207	Transcriptional regulator
LDH65_03025	COG0673	inositol 2-dehydrogenase activity
LDH65_03045	COG3209	COG3209 Rhs family protein
LDH65_03055	COG3501	Rhs element vgr protein
LDH65_03100	COG3501	Rhs element vgr protein
LDH65_03190	COG0513	Belongs to the DEAD box helicase family
LDH65_03210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LDH65_03220	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LDH65_03230	COG0826	peptidase U32
LDH65_03235	COG0826	peptidase U32
LDH65_03240	COG3154	lipid carrier protein
LDH65_03245	COG3153	acetyltransferase
LDH65_03265	COG1653	transport
LDH65_03270	COG1175	transmembrane transport
LDH65_03275	COG0395	ABC-type sugar transport system, permease component
LDH65_03280	COG3842	ATPase activity
LDH65_03295	COG0702	epimerase
LDH65_03300	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LDH65_03305	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
LDH65_03310	COG3454	Phosphonate metabolism
LDH65_03315	COG4778	phosphonate C-P lyase system protein PhnL
LDH65_03320	COG4107	phosphonate C-P lyase system protein PhnK
LDH65_03325	COG3627	carbon phosphorus lyase activity
LDH65_03330	COG3626	phosphonate metabolism
LDH65_03335	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
LDH65_03340	COG3624	Phosphonate C-P lyase system protein PhnG
LDH65_03345	COG2188	Transcriptional regulator
LDH65_03360	COG4608	Belongs to the ABC transporter superfamily
LDH65_03365	COG0444	Belongs to the ABC transporter superfamily
LDH65_03370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LDH65_03375	COG0601	transmembrane transport
LDH65_03385	COG2731	YhcH YjgK YiaL family protein
LDH65_03395	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
LDH65_03405	COG0525	valine-tRNA ligase activity
LDH65_03410	COG2927	DNA polymerase III (CHI subunit)
LDH65_03420	COG0795	lipopolysaccharide-transporting ATPase activity
LDH65_03425	COG0795	lipopolysaccharide-transporting ATPase activity
LDH65_03435	COG0582	viral genome integration into host DNA
LDH65_03490	COG1459	type II secretion system
LDH65_03495	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LDH65_03500	COG4969	Belongs to the N-Me-Phe pilin family
LDH65_03510	COG3023	N-Acetylmuramoyl-L-alanine amidase
LDH65_03515	COG3725	Membrane protein required for beta-lactamase induction
LDH65_03520	COG1113	amino acid transport
LDH65_03525	COG2186	Transcriptional regulator
LDH65_03530	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LDH65_03535	COG0508	dehydrogenase complex catalyzes the overall conversion of
LDH65_03540	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDH65_03550	COG1049	propionate catabolic process, 2-methylcitrate cycle
LDH65_03560	COG0697	spore germination
LDH65_03580	COG2132	Multicopper oxidase
LDH65_03585	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LDH65_03590	COG0288	reversible hydration of carbon dioxide
LDH65_03595	COG1131	(ABC) transporter
LDH65_03600	COG0842	Transport permease protein
LDH65_03625	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LDH65_03630	COG0617	tRNA 3'-terminal CCA addition
LDH65_03635	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LDH65_03650	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LDH65_03655	COG1643	Atp-dependent helicase
LDH65_03660	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LDH65_03665	COG1120	ATPase activity
LDH65_03675	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LDH65_03680	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LDH65_03700	COG2860	membrane
LDH65_03720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LDH65_03725	COG4999	Histidine kinase
LDH65_03725	COG2205	protein histidine kinase activity
LDH65_03725	COG3850	Histidine kinase
LDH65_03725	COG3437	response regulator, receiver
LDH65_03735	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LDH65_03740	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LDH65_03745	COG3956	TIGRFAM MazG family protein
LDH65_03765	COG0602	queuosine metabolic process
LDH65_03770	COG0720	synthase
LDH65_03825	COG0529	Catalyzes the synthesis of activated sulfate
LDH65_03865	COG1388	LysM domain
LDH65_03865	COG4942	peptidase
LDH65_03870	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LDH65_03880	COG0698	ribose 5-phosphate isomerase
LDH65_03885	COG1063	alcohol dehydrogenase
LDH65_03890	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_03910	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LDH65_03930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_03935	COG1858	cytochrome C peroxidase
LDH65_03955	COG0024	Methionine aminopeptidase
LDH65_03965	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LDH65_03965	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LDH65_03970	COG1070	Carbohydrate kinase
LDH65_03975	COG3623	hexulose-6-phosphate isomerase
LDH65_03980	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_03985	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_03990	COG1129	ABC transporter
LDH65_04005	COG1349	DNA-binding transcription factor activity
LDH65_04010	COG0235	Class ii aldolase
LDH65_04015	COG0243	molybdopterin cofactor binding
LDH65_04020	COG0437	4 iron, 4 sulfur cluster binding
LDH65_04025	COG3302	dmso reductase anchor subunit
LDH65_04030	COG3381	protein complex oligomerization
LDH65_04035	COG3038	cytochrome b561
LDH65_04040	COG3783	Cytochrome b(562)
LDH65_04050	COG1879	ABC-type sugar transport system periplasmic component
LDH65_04060	COG1129	ABC transporter
LDH65_04065	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_04070	COG3959	Transketolase, thiamine diphosphate binding domain
LDH65_04075	COG3958	Transketolase
LDH65_04080	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LDH65_04120	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LDH65_04150	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LDH65_04155	COG1238	metal cluster binding
LDH65_04160	COG2918	glutathione biosynthetic process
LDH65_04180	COG4536	flavin adenine dinucleotide binding
LDH65_04185	COG4137	Cytochrome C assembly protein
LDH65_04190	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDH65_04220	COG3137	Salt-induced outer membrane protein
LDH65_04230	COG3279	Response regulator of the LytR AlgR family
LDH65_04235	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDH65_04240	COG0287	Prephenate dehydrogenase
LDH65_04240	COG1605	Chorismate mutase
LDH65_04270	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LDH65_04275	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LDH65_04280	COG0564	pseudouridine synthase activity
LDH65_04290	COG0542	response to heat
LDH65_04320	COG5544	Lipoprotein
LDH65_04325	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LDH65_04330	COG0045	succinate-CoA ligase (ADP-forming) activity
LDH65_04330	COG1042	CoA-binding domain protein
LDH65_04330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LDH65_04335	COG3148	PFAM DTW domain containing protein
LDH65_04340	COG3118	belongs to the thioredoxin family
LDH65_04345	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDH65_04350	COG2814	Major facilitator Superfamily
LDH65_04355	COG1566	PFAM secretion protein HlyD family protein
LDH65_04360	COG1846	Transcriptional regulator
LDH65_04370	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LDH65_04375	COG2814	Major facilitator Superfamily
LDH65_04410	COG0765	amino acid transport
LDH65_04435	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LDH65_04460	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
LDH65_04470	COG1960	acyl-CoA dehydrogenase activity
LDH65_04480	COG0121	glutamine amidotransferase
LDH65_04485	COG3034	peptidoglycan biosynthetic process
LDH65_04500	COG1805	sodium ion transport
LDH65_04505	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LDH65_04525	COG1477	protein flavinylation
LDH65_04545	COG2195	Cleaves the N-terminal amino acid of tripeptides
LDH65_04550	COG0583	DNA-binding transcription factor activity
LDH65_04625	COG1940	carbohydrate kinase activity
LDH65_04630	COG0419	ATPase involved in DNA repair
LDH65_04635	COG0420	3'-5' exonuclease activity
LDH65_04640	COG0745	RESPONSE REGULATOR receiver
LDH65_04645	COG5002	protein histidine kinase activity
LDH65_04665	COG0366	Alpha amylase catalytic
LDH65_04685	COG0450	alkyl hydroperoxide reductase
LDH65_04705	COG1862	Preprotein translocase
LDH65_04710	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LDH65_04715	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LDH65_04740	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LDH65_04740	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LDH65_04755	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LDH65_04760	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LDH65_04775	COG0142	geranyltranstransferase activity
LDH65_04790	COG0693	protein deglycase activity
LDH65_04795	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LDH65_04805	COG2814	Major facilitator Superfamily
LDH65_04815	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LDH65_04820	COG1845	cytochrome c oxidase, subunit III
LDH65_04825	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LDH65_04830	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LDH65_04840	COG2223	nitrite transmembrane transporter activity
LDH65_04845	COG3056	Lipoprotein
LDH65_04850	COG0271	Belongs to the BolA IbaG family
LDH65_04870	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LDH65_04875	COG0776	regulation of translation
LDH65_04880	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LDH65_04885	COG1555	photosystem II stabilization
LDH65_04890	COG0824	Thioesterase
LDH65_04925	COG1522	sequence-specific DNA binding
LDH65_04930	COG1132	(ABC) transporter
LDH65_04935	COG1132	(ABC) transporter
LDH65_04940	COG0347	Belongs to the P(II) protein family
LDH65_04945	COG0004	ammonium transporteR
LDH65_04950	COG1946	Acyl-CoA thioesterase
LDH65_04955	COG3126	Type III secretion system lipoprotein chaperone (YscW)
LDH65_04960	COG3695	enzyme binding
LDH65_04985	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LDH65_04995	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LDH65_05000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LDH65_05005	COG1309	transcriptional regulator
LDH65_05010	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LDH65_05015	COG1196	nuclear chromosome segregation
LDH65_05015	COG3264	Mechanosensitive ion channel
LDH65_05030	COG2832	Protein of unknown function (DUF454)
LDH65_05040	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LDH65_05070	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LDH65_05070	COG0543	2 iron, 2 sulfur cluster binding
LDH65_05095	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LDH65_05135	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LDH65_05155	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
LDH65_05160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDH65_05165	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LDH65_05165	COG4651	solute:proton antiporter activity
LDH65_05170	COG2223	nitrite transmembrane transporter activity
LDH65_05175	COG0737	Belongs to the 5'-nucleotidase family
LDH65_05180	COG0737	Belongs to the 5'-nucleotidase family
LDH65_05185	COG0737	Belongs to the 5'-nucleotidase family
LDH65_05200	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LDH65_05205	COG3735	TraB family
LDH65_05210	COG2217	Heavy metal translocating P-type atpase
LDH65_05215	COG0789	Transcriptional regulator
LDH65_05220	COG1585	Membrane protein implicated in regulation of membrane protease activity
LDH65_05225	COG0330	HflC and HflK could
LDH65_05230	COG3118	belongs to the thioredoxin family
LDH65_05235	COG0300	oxidoreductase activity
LDH65_05240	COG2755	lipolytic protein G-D-S-L family
LDH65_05245	COG4181	ATPase activity
LDH65_05250	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LDH65_05255	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LDH65_05260	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LDH65_05270	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LDH65_05290	COG1393	Belongs to the ArsC family
LDH65_05295	COG4783	chaperone-mediated protein folding
LDH65_05310	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LDH65_05315	COG2716	regulation of RNA biosynthetic process
LDH65_05325	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LDH65_05340	COG2321	neutral zinc metallopeptidase
LDH65_05365	COG1876	peptidase activity
LDH65_05375	COG1393	Belongs to the ArsC family
LDH65_05390	COG1175	transmembrane transport
LDH65_05395	COG3842	ATPase activity
LDH65_05405	COG3119	arylsulfatase activity
LDH65_05410	COG0641	radical SAM
LDH65_05415	COG1988	membrane-bound metal-dependent
LDH65_05425	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LDH65_05435	COG2197	response regulator
LDH65_05440	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LDH65_05440	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
LDH65_05445	COG3062	negative regulation of establishment of protein localization
LDH65_05455	COG3043	anaerobic respiration
LDH65_05460	COG3005	denitrification pathway
LDH65_05500	COG3111	PFAM Bacterial OB fold (BOF) protein
LDH65_05510	COG2837	iron assimilation
LDH65_05515	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LDH65_05530	COG4886	Leucine-rich repeat (LRR) protein
LDH65_05540	COG2731	YhcH YjgK YiaL family protein
LDH65_05545	COG1737	Transcriptional regulator
LDH65_05555	COG4150	thiosulfate binding
LDH65_05560	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LDH65_05565	COG4208	sulfate ABC transporter
LDH65_05570	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LDH65_05590	COG0745	RESPONSE REGULATOR receiver
LDH65_05595	COG3850	Histidine kinase
LDH65_05595	COG5002	protein histidine kinase activity
LDH65_05605	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LDH65_05620	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LDH65_05635	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LDH65_05640	COG0745	RESPONSE REGULATOR receiver
LDH65_05645	COG2205	protein histidine kinase activity
LDH65_05665	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LDH65_05675	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
LDH65_05690	COG3530	Putative quorum-sensing-regulated virulence factor
LDH65_05755	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LDH65_05770	COG0667	Aldo Keto reductase
LDH65_05795	COG0436	Aminotransferase
LDH65_05800	COG3038	cytochrome b561
LDH65_05830	COG3381	protein complex oligomerization
LDH65_05835	COG3302	dmso reductase anchor subunit
LDH65_05840	COG0437	4 iron, 4 sulfur cluster binding
LDH65_05845	COG0243	molybdopterin cofactor binding
LDH65_05880	COG2951	lytic endotransglycosylase activity
LDH65_05940	COG3121	Chaperone
LDH65_05945	COG3188	usher protein
LDH65_05950	COG3328	transposase activity
LDH65_05955	COG3037	sugar-specific permease SgaT UlaA
LDH65_05960	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LDH65_05965	COG0622	Phosphoesterase
LDH65_05975	COG1090	epimerase
LDH65_05980	COG4598	ABC transporter
LDH65_05985	COG4160	amino acid transport
LDH65_05990	COG4215	(ABC) transporter
LDH65_05995	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_06005	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LDH65_06010	COG1286	toxin biosynthetic process
LDH65_06015	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
LDH65_06020	COG0285	dihydrofolate synthase activity
LDH65_06030	COG0586	Pfam SNARE associated Golgi protein
LDH65_06040	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LDH65_06055	COG0697	spore germination
LDH65_06070	COG1794	racemase activity, acting on amino acids and derivatives
LDH65_06080	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LDH65_06095	COG3101	peptidyl-lysine hydroxylation
LDH65_06100	COG0730	response to heat
LDH65_06115	COG2890	protein-(glutamine-N5) methyltransferase activity
LDH65_06125	COG2062	phosphohistidine phosphatase, SixA
LDH65_06140	COG3691	Protein conserved in bacteria
LDH65_06155	COG3088	subunit of a heme lyase
LDH65_06155	COG4235	cytochrome complex assembly
LDH65_06160	COG4235	cytochrome complex assembly
LDH65_06160	COG3088	subunit of a heme lyase
LDH65_06165	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LDH65_06170	COG1138	Cytochrome C-type biogenesis protein
LDH65_06180	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LDH65_06185	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LDH65_06190	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LDH65_06210	COG1704	LemA family
LDH65_06220	COG2824	Alkylphosphonate utilization operon protein PhnA
LDH65_06280	COG0667	Aldo Keto reductase
LDH65_06285	COG0656	L-ascorbic acid biosynthetic process
LDH65_06295	COG1472	Belongs to the glycosyl hydrolase 3 family
LDH65_06310	COG3328	transposase activity
LDH65_06365	COG3423	Transcriptional regulator
LDH65_06375	COG3328	transposase activity
LDH65_06380	COG3188	usher protein
LDH65_06440	COG0671	phosphoesterase, PA-phosphatase related
LDH65_06440	COG2453	phosphatase
LDH65_06445	COG2267	carboxylic ester hydrolase activity
LDH65_06455	COG4589	Belongs to the CDS family
LDH65_06460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDH65_06470	COG0582	viral genome integration into host DNA
LDH65_06505	COG2501	S4 domain
LDH65_06525	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LDH65_06530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LDH65_06545	COG0581	inorganic phosphate transmembrane transporter activity
LDH65_06555	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LDH65_06570	COG2239	Acts as a magnesium transporter
LDH65_06575	COG0443	Heat shock 70 kDa protein
LDH65_06580	COG1177	transmembrane transport
LDH65_06585	COG1176	ABC-type spermidine putrescine transport system, permease component I
LDH65_06595	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LDH65_06605	COG3842	ATPase activity
LDH65_06630	COG2205	protein histidine kinase activity
LDH65_06635	COG2205	protein histidine kinase activity
LDH65_06640	COG0745	RESPONSE REGULATOR receiver
LDH65_06645	COG3422	double-strand break repair
LDH65_06650	COG0826	peptidase U32
LDH65_06675	COG0351	phosphomethylpyrimidine kinase
LDH65_06690	COG3328	transposase activity
LDH65_06735	COG0516	GMP reductase activity
LDH65_06735	COG0517	IMP dehydrogenase activity
LDH65_06745	COG1645	bacterial-type flagellum-dependent swarming motility
LDH65_06760	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LDH65_06765	COG2976	Protein conserved in bacteria
LDH65_06805	COG3468	outer membrane autotransporter barrel domain protein
LDH65_06830	COG2975	iron-sulfur cluster assembly
LDH65_06835	COG0633	Ferredoxin
LDH65_06840	COG0443	Heat shock 70 kDa protein
LDH65_06855	COG0822	iron-sulfur transferase activity
LDH65_06860	COG1104	cysteine desulfurase activity
LDH65_06885	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
LDH65_06890	COG3683	transport system, periplasmic component
LDH65_06895	COG3711	transcriptional antiterminator
LDH65_06900	COG2814	Major facilitator Superfamily
LDH65_06920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LDH65_06920	COG1017	nitric oxide dioxygenase activity
LDH65_06930	COG0347	Belongs to the P(II) protein family
LDH65_06935	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LDH65_06935	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDH65_06940	COG2204	response regulator
LDH65_06955	COG2205	protein histidine kinase activity
LDH65_07000	COG0560	Phosphoserine phosphatase
LDH65_07010	COG1737	Transcriptional regulator
LDH65_07015	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LDH65_07030	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LDH65_07075	COG3086	response to oxidative stress
LDH65_07080	COG3026	antisigma factor binding
LDH65_07095	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LDH65_07110	COG0513	Belongs to the DEAD box helicase family
LDH65_07155	COG1984	allophanate hydrolase subunit 2
LDH65_07170	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LDH65_07175	COG5212	phosphodiesterase
LDH65_07185	COG3272	Protein of unknown function (DUF1722)
LDH65_07220	COG2205	protein histidine kinase activity
LDH65_07225	COG0745	RESPONSE REGULATOR receiver
LDH65_07240	COG0033	Phosphoglucomutase
LDH65_07245	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
LDH65_07260	COG1917	Cupin 2, conserved barrel domain protein
LDH65_07260	COG2169	Transcriptional regulator
LDH65_07265	COG1447	Phosphotransferase system cellobiose-specific component IIA
LDH65_07270	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LDH65_07275	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LDH65_07285	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDH65_07295	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LDH65_07305	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
LDH65_07310	COG4413	Urea transporter
LDH65_07325	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LDH65_07350	COG0831	urea catabolic process
LDH65_07355	COG1124	(ABC) transporter
LDH65_07360	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LDH65_07365	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LDH65_07375	COG0747	negative chemotaxis
LDH65_07380	COG1278	Cold shock
LDH65_07420	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDH65_07425	COG4175	Glycine betaine
LDH65_07430	COG4176	ABC-type proline glycine betaine transport system permease component
LDH65_07435	COG2113	Glycine betaine
LDH65_07465	COG0582	viral genome integration into host DNA
LDH65_07475	COG0596	Alpha beta hydrolase
LDH65_07495	COG0735	belongs to the Fur family
LDH65_07520	COG2190	(PTS) system
LDH65_07520	COG1263	PTS System
LDH65_07520	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LDH65_07530	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LDH65_07535	COG1940	carbohydrate kinase activity
LDH65_07535	COG1846	Transcriptional regulator
LDH65_07540	COG0647	UMP catabolic process
LDH65_07545	COG0367	asparagine synthase
LDH65_07580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LDH65_07585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LDH65_07590	COG1702	phosphate starvation-inducible protein PhoH
LDH65_07600	COG4535	Mg2 and Co2 transporter CorC
LDH65_07605	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LDH65_07615	COG0765	amino acid transport
LDH65_07620	COG0765	amino acid transport
LDH65_07625	COG1126	abc transporter atp-binding protein
LDH65_07630	COG2888	peptidyl-tyrosine sulfation
LDH65_07645	COG1466	dna polymerase III delta subunit
LDH65_07655	COG0799	negative regulation of ribosome biogenesis
LDH65_07665	COG0768	penicillin binding
LDH65_07670	COG0772	Belongs to the SEDS family
LDH65_07675	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LDH65_07680	COG1686	Belongs to the peptidase S11 family
LDH65_07700	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LDH65_07705	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDH65_07715	COG1278	Cold shock
LDH65_07720	COG2197	response regulator
LDH65_07745	COG5265	(ABC) transporter
LDH65_07755	COG3718	enzyme involved in inositol metabolism
LDH65_07765	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDH65_07770	COG0673	inositol 2-dehydrogenase activity
LDH65_07775	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_07780	COG1129	ABC transporter
LDH65_07795	COG3962	Belongs to the TPP enzyme family
LDH65_07815	COG2373	Large extracellular alpha-helical protein
LDH65_07820	COG4953	penicillin-binding protein 1C
LDH65_07825	COG3328	transposase activity
LDH65_07855	COG0280	phosphate acetyltransferase
LDH65_07855	COG0857	belongs to the CobB CobQ family
LDH65_07875	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LDH65_07880	COG0471	metal ion transport
LDH65_07880	COG0490	domain, Protein
LDH65_07895	COG0436	Aminotransferase
LDH65_07900	COG0583	DNA-binding transcription factor activity
LDH65_07910	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LDH65_07930	COG1034	ATP synthesis coupled electron transport
LDH65_07945	COG0839	Belongs to the complex I subunit 6 family
LDH65_07955	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LDH65_07960	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LDH65_07975	COG2731	YhcH YjgK YiaL family protein
LDH65_07980	COG3265	gluconokinase activity
LDH65_07985	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_07990	COG1649	PFAM Uncharacterised BCR, COG1649
LDH65_07995	COG1609	Transcriptional regulator
LDH65_08000	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDH65_08015	COG0129	dihydroxy-acid dehydratase activity
LDH65_08020	COG4575	ribosome binding
LDH65_08030	COG1169	isochorismate synthase
LDH65_08045	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LDH65_08060	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LDH65_08105	COG1126	abc transporter atp-binding protein
LDH65_08110	COG0765	amino acid transport
LDH65_08115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_08145	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LDH65_08165	COG1063	alcohol dehydrogenase
LDH65_08170	COG1879	ABC-type sugar transport system periplasmic component
LDH65_08175	COG1129	ABC transporter
LDH65_08180	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_08185	COG1609	Transcriptional regulator
LDH65_08190	COG0583	DNA-binding transcription factor activity
LDH65_08195	COG0473	3-isopropylmalate dehydrogenase activity
LDH65_08205	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LDH65_08210	COG4638	Rieske (2fe-2S)
LDH65_08215	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LDH65_08220	COG2831	hemolysin activation secretion protein
LDH65_08225	COG3210	domain, Protein
LDH65_08270	COG3210	domain, Protein
LDH65_08280	COG3842	ATPase activity
LDH65_08290	COG1609	Transcriptional regulator
LDH65_08305	COG0395	ABC-type sugar transport system, permease component
LDH65_08310	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
LDH65_08330	COG0668	transmembrane transport
LDH65_08335	COG1518	maintenance of DNA repeat elements
LDH65_08340	COG1203	CRISPR-associated helicase, Cas3
LDH65_08365	COG0667	Aldo Keto reductase
LDH65_08375	COG0477	Major facilitator Superfamily
LDH65_08380	COG0583	DNA-binding transcription factor activity
LDH65_08385	COG2771	luxR family
LDH65_08390	COG3916	Acyl-homoserine-lactone synthase
LDH65_08410	COG0628	permease
LDH65_08430	COG3328	transposase activity
LDH65_08450	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LDH65_08460	COG3328	transposase activity
LDH65_08465	COG1530	ribonuclease E activity
LDH65_08470	COG0564	pseudouridine synthase activity
LDH65_08480	COG0424	maF-like protein
LDH65_08485	COG1399	metal-binding, possibly nucleic acid-binding protein
LDH65_08490	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LDH65_08520	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LDH65_08530	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LDH65_08540	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LDH65_08550	COG0470	DNA polymerase III
LDH65_08555	COG0084	hydrolase, TatD family'
LDH65_08560	COG1263	PTS System
LDH65_08560	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LDH65_08570	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LDH65_08575	COG0537	adenosine 5'-monophosphoramidase activity
LDH65_08580	COG5633	Lipoprotein
LDH65_08595	COG1472	Belongs to the glycosyl hydrolase 3 family
LDH65_08605	COG1252	NADH dehydrogenase
LDH65_08620	COG3328	transposase activity
LDH65_08625	COG3134	Outer membrane lipoprotein
LDH65_08630	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LDH65_08635	COG4591	ABC-type transport system involved in lipoprotein release permease component
LDH65_08645	COG4591	ABC-type transport system involved in lipoprotein release permease component
LDH65_08665	COG2850	peptidyl-arginine hydroxylation
LDH65_08675	COG0745	RESPONSE REGULATOR receiver
LDH65_08685	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LDH65_08705	COG1187	pseudouridine synthase activity
LDH65_08710	COG0538	isocitrate dehydrogenase activity
LDH65_08725	COG0840	transmembrane signaling receptor activity
LDH65_08730	COG0702	epimerase
LDH65_08735	COG1733	regulation of RNA biosynthetic process
LDH65_08760	COG1522	sequence-specific DNA binding
LDH65_08775	COG3321	synthase
LDH65_08775	COG0604	alcohol dehydrogenase
LDH65_08775	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_08800	COG1285	pathogenesis
LDH65_08835	COG2198	Histidine kinase
LDH65_08835	COG0643	Histidine kinase
LDH65_08840	COG0835	chemotaxis
LDH65_08845	COG2271	Major facilitator Superfamily
LDH65_08850	COG0251	oxidation-reduction process
LDH65_08860	COG2964	Protein conserved in bacteria
LDH65_08880	COG0840	transmembrane signaling receptor activity
LDH65_08885	COG0840	transmembrane signaling receptor activity
LDH65_08890	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LDH65_08900	COG0745	RESPONSE REGULATOR receiver
LDH65_08905	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LDH65_08910	COG3023	N-Acetylmuramoyl-L-alanine amidase
LDH65_08925	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LDH65_08990	COG3121	Chaperone
LDH65_09010	COG3008	intermembrane lipid transfer
LDH65_09015	COG2995	paraquat-inducible protein a
LDH65_09020	COG1956	GAF domain-containing protein
LDH65_09030	COG0793	Belongs to the peptidase S41A family
LDH65_09040	COG3539	Fimbrial protein
LDH65_09045	COG3121	Chaperone
LDH65_09060	COG3121	Chaperone
LDH65_09065	COG2814	Major facilitator Superfamily
LDH65_09070	COG0823	Involved in the tonB-independent uptake of proteins
LDH65_09080	COG3023	N-Acetylmuramoyl-L-alanine amidase
LDH65_09085	COG1823	symporter activity
LDH65_09090	COG1988	membrane-bound metal-dependent
LDH65_09095	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LDH65_09100	COG1653	transport
LDH65_09105	COG3842	ATPase activity
LDH65_09110	COG0395	ABC-type sugar transport system, permease component
LDH65_09115	COG1175	transmembrane transport
LDH65_09125	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_09135	COG1917	Cupin 2, conserved barrel domain protein
LDH65_09140	COG3328	transposase activity
LDH65_09185	COG1132	(ABC) transporter
LDH65_09195	COG2207	Transcriptional regulator
LDH65_09230	COG1113	amino acid transport
LDH65_09250	COG1496	oxidoreductase activity
LDH65_09255	COG2226	methyltransferase
LDH65_09265	COG5002	protein histidine kinase activity
LDH65_09265	COG5001	Diguanylate cyclase
LDH65_09265	COG3447	MASE1 domain protein
LDH65_09285	COG3716	PTS system mannose fructose sorbose family IID component
LDH65_09290	COG3715	PTS system
LDH65_09295	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LDH65_09295	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LDH65_09305	COG1846	Transcriptional regulator
LDH65_09320	COG1012	belongs to the aldehyde dehydrogenase family
LDH65_09325	COG3384	dioxygenase
LDH65_09335	COG3971	2-oxopent-4-enoate hydratase activity
LDH65_09350	COG2368	4-hydroxyphenylacetate
LDH65_09355	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LDH65_09360	COG1760	l-serine dehydratase
LDH65_09385	COG0513	Belongs to the DEAD box helicase family
LDH65_09390	COG3141	response to X-ray
LDH65_09405	COG1770	oligopeptidase
LDH65_09420	COG1528	Iron-storage protein
LDH65_09425	COG2372	response to copper ion
LDH65_09450	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LDH65_09455	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LDH65_09480	COG3418	PFAM FlgN family protein
LDH65_09485	COG2747	anti-sigma28 factor FlgM
LDH65_09495	COG1815	bacterial-type flagellum-dependent cell motility
LDH65_09500	COG1558	bacterial-type flagellum-dependent cell motility
LDH65_09540	COG1256	bacterial-type flagellum assembly
LDH65_09550	COG2390	Transcriptional regulator
LDH65_09555	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_09555	COG3347	Dehydrogenase
LDH65_09560	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_09570	COG1129	ABC transporter
LDH65_09575	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_09580	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDH65_09600	COG1987	bacterial-type flagellum assembly
LDH65_09625	COG1580	Controls the rotational direction of flagella during chemotaxis
LDH65_09640	COG1157	protein secretion by the type III secretion system
LDH65_09660	COG1677	Flagellar hook-basal body complex protein FliE
LDH65_09680	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LDH65_09685	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LDH65_09690	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
LDH65_09720	COG1191	sigma factor activity
LDH65_09735	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_09740	COG0765	amino acid transport
LDH65_09745	COG1126	abc transporter atp-binding protein
LDH65_09765	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LDH65_09765	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LDH65_09765	COG0506	proline dehydrogenase activity
LDH65_09780	COG0672	)-iron permease
LDH65_09785	COG2822	iron ion transport
LDH65_09805	COG1113	amino acid transport
LDH65_09870	COG1372	Participates in initiation and elongation during chromosome replication
LDH65_09870	COG0305	Participates in initiation and elongation during chromosome replication
LDH65_09965	COG2188	Transcriptional regulator
LDH65_09970	COG0673	inositol 2-dehydrogenase activity
LDH65_09980	COG1175	transmembrane transport
LDH65_09985	COG0395	ABC-type sugar transport system, permease component
LDH65_09990	COG3842	ATPase activity
LDH65_10045	COG4771	TonB-dependent receptor
LDH65_10050	COG1021	2,3-dihydroxybenzoate-AMP ligase
LDH65_10070	COG3433	isochorismatase activity
LDH65_10070	COG2226	methyltransferase
LDH65_10070	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LDH65_10085	COG1132	(ABC) transporter
LDH65_10090	COG2814	Major facilitator Superfamily
LDH65_10095	COG1169	isochorismate synthase
LDH65_10100	COG0582	viral genome integration into host DNA
LDH65_10110	COG3121	Chaperone
LDH65_10120	COG3188	usher protein
LDH65_10135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_10135	COG2205	protein histidine kinase activity
LDH65_10145	COG0427	acetyl-CoA hydrolase
LDH65_10150	COG2030	dehydratase
LDH65_10175	COG2814	Major facilitator Superfamily
LDH65_10190	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
LDH65_10195	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LDH65_10205	COG1349	DNA-binding transcription factor activity
LDH65_10215	COG2066	Belongs to the glutaminase family
LDH65_10230	COG0672	)-iron permease
LDH65_10245	COG0577	efflux transmembrane transporter activity
LDH65_10245	COG1136	(ABC) transporter
LDH65_10255	COG0577	efflux transmembrane transporter activity
LDH65_10255	COG1136	(ABC) transporter
LDH65_10275	COG0006	proline dipeptidase activity
LDH65_10280	COG0457	Tetratricopeptide repeat
LDH65_10285	COG1649	PFAM Uncharacterised BCR, COG1649
LDH65_10285	COG0726	polysaccharide deacetylase
LDH65_10290	COG1215	transferase activity, transferring glycosyl groups
LDH65_10295	COG3658	cytochrome
LDH65_10310	COG1702	phosphate starvation-inducible protein PhoH
LDH65_10315	COG0387	Pfam Sodium calcium exchanger
LDH65_10320	COG3850	Histidine kinase
LDH65_10330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LDH65_10395	COG0402	S-adenosylhomocysteine deaminase activity
LDH65_10410	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LDH65_10415	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LDH65_10420	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LDH65_10465	COG3328	transposase activity
LDH65_10485	COG0500	methyltransferase
LDH65_10530	COG5002	protein histidine kinase activity
LDH65_10580	COG0012	GTP binding
LDH65_10595	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDH65_10620	COG2890	protein-(glutamine-N5) methyltransferase activity
LDH65_10640	COG0659	secondary active sulfate transmembrane transporter activity
LDH65_10660	COG3833	ABC-type maltose transport systems, permease component
LDH65_10665	COG1176	ABC-type spermidine putrescine transport system, permease component I
LDH65_10685	COG0584	glycerophosphoryl diester phosphodiesterase
LDH65_10690	COG1940	carbohydrate kinase activity
LDH65_10705	COG3381	protein complex oligomerization
LDH65_10720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LDH65_10730	COG0728	peptidoglycan biosynthetic process
LDH65_10750	COG3102	Protein conserved in bacteria
LDH65_10770	COG3788	relative of glutathione S-transferase, MAPEG superfamily
LDH65_10775	COG1801	Protein of unknown function DUF72
LDH65_10785	COG0494	nUDIX hydrolase
LDH65_10810	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LDH65_10820	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
LDH65_10825	COG0739	heme binding
LDH65_10830	COG1560	Kdo2-lipid A biosynthetic process
LDH65_10840	COG0469	pyruvate kinase activity
LDH65_10845	COG1737	Transcriptional regulator
LDH65_10850	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LDH65_10855	COG0800	Aldolase
LDH65_10870	COG0251	oxidation-reduction process
LDH65_10875	COG1199	ATP-dependent helicase activity
LDH65_10885	COG3065	identical protein binding
LDH65_10895	COG0318	PFAM AMP-dependent synthetase and ligase
LDH65_10900	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
LDH65_10905	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LDH65_10910	COG2894	cell division
LDH65_10930	COG2951	lytic endotransglycosylase activity
LDH65_10935	COG0179	Fumarylacetoacetate (FAA) hydrolase
LDH65_10945	COG0582	viral genome integration into host DNA
LDH65_11050	COG3328	transposase activity
LDH65_11215	COG3328	transposase activity
LDH65_11225	COG1104	cysteine desulfurase activity
LDH65_11260	COG2719	SpoVR family
LDH65_11280	COG0583	DNA-binding transcription factor activity
LDH65_11295	COG2766	serine protein kinase
LDH65_11300	COG3713	MltA-interacting MipA family protein
LDH65_11320	COG3139	Protein of unknown function (DUF1315)
LDH65_11325	COG1335	isochorismatase
LDH65_11330	COG0252	asparaginase activity
LDH65_11335	COG0616	signal peptide processing
LDH65_11340	COG0778	Nitroreductase
LDH65_11345	COG0709	Synthesizes selenophosphate from selenide and ATP
LDH65_11350	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LDH65_11360	COG0494	nUDIX hydrolase
LDH65_11365	COG0708	Exodeoxyribonuclease III
LDH65_11370	COG0583	DNA-binding transcription factor activity
LDH65_11390	COG3328	transposase activity
LDH65_11395	COG0788	formyltetrahydrofolate deformylase activity
LDH65_11405	COG0745	RESPONSE REGULATOR receiver
LDH65_11435	COG1012	belongs to the aldehyde dehydrogenase family
LDH65_11435	COG1454	alcohol dehydrogenase
LDH65_11440	COG2095	MarC family integral membrane protein
LDH65_11450	COG0601	transmembrane transport
LDH65_11455	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LDH65_11460	COG0444	Belongs to the ABC transporter superfamily
LDH65_11465	COG4608	Belongs to the ABC transporter superfamily
LDH65_11510	COG2350	Protein conserved in bacteria
LDH65_11515	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LDH65_11520	COG3328	transposase activity
LDH65_11555	COG3047	cAMP biosynthetic process
LDH65_11575	COG0135	phosphoribosylanthranilate isomerase activity
LDH65_11575	COG0134	indole-3-glycerol-phosphate synthase activity
LDH65_11600	COG0009	L-threonylcarbamoyladenylate synthase
LDH65_11605	COG1187	pseudouridine synthase activity
LDH65_11615	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_11620	COG0616	signal peptide processing
LDH65_11640	COG0583	DNA-binding transcription factor activity
LDH65_11650	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LDH65_11660	COG0671	phosphoesterase, PA-phosphatase related
LDH65_11665	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
LDH65_11670	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LDH65_11685	COG0023	Translation Initiation Factor
LDH65_11705	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LDH65_11710	COG2879	small protein
LDH65_11715	COG1966	Carbon starvation protein
LDH65_11725	COG2271	Major facilitator Superfamily
LDH65_11730	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LDH65_11735	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LDH65_11745	COG4659	FMN binding
LDH65_11750	COG4658	electron transport chain
LDH65_11755	COG2207	Transcriptional regulator
LDH65_11755	COG3708	Transcriptional regulator
LDH65_11785	COG1132	(ABC) transporter
LDH65_11795	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LDH65_11800	COG2274	protein secretion by the type I secretion system
LDH65_11815	COG1879	ABC-type sugar transport system periplasmic component
LDH65_11820	COG1129	ABC transporter
LDH65_11825	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_11835	COG0673	inositol 2-dehydrogenase activity
LDH65_11840	COG0385	Bile acid
LDH65_11850	COG5339	Protein conserved in bacteria
LDH65_11860	COG0114	fumarate hydratase activity
LDH65_11875	COG0583	DNA-binding transcription factor activity
LDH65_11880	COG1940	carbohydrate kinase activity
LDH65_11885	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LDH65_11890	COG0038	chloride channel
LDH65_11895	COG1609	Transcriptional regulator
LDH65_11915	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LDH65_11920	COG1116	anion transmembrane transporter activity
LDH65_11955	COG0028	Belongs to the TPP enzyme family
LDH65_11960	COG0440	acetolactate synthase activity
LDH65_11965	COG1011	Hydrolase
LDH65_11985	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LDH65_11990	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LDH65_11995	COG0589	response to stress
LDH65_12000	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LDH65_12005	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LDH65_12020	COG0531	amino acid
LDH65_12030	COG0745	RESPONSE REGULATOR receiver
LDH65_12035	COG2205	protein histidine kinase activity
LDH65_12040	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LDH65_12070	COG3038	cytochrome b561
LDH65_12080	COG3591	Belongs to the peptidase S1B family
LDH65_12095	COG1643	Atp-dependent helicase
LDH65_12105	COG2390	Transcriptional regulator
LDH65_12110	COG0246	Mannitol dehydrogenase
LDH65_12115	COG3784	Protein of unknown function (DUF1318)
LDH65_12125	COG2911	Protein conserved in bacteria
LDH65_12130	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDH65_12135	COG3187	Heat shock protein
LDH65_12140	COG3042	response to heat
LDH65_12145	COG1285	pathogenesis
LDH65_12155	COG0674	pyruvate-flavodoxin oxidoreductase activity
LDH65_12155	COG1013	pyruvate-flavodoxin oxidoreductase activity
LDH65_12155	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LDH65_12155	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LDH65_12165	COG0657	acetylesterase activity
LDH65_12180	COG4166	transmembrane transport
LDH65_12185	COG2866	Carboxypeptidase
LDH65_12190	COG4948	Mandelate Racemase Muconate Lactonizing
LDH65_12220	COG5642	Protein of unknown function (DUF2384)
LDH65_12225	COG5654	RES domain protein
LDH65_12235	COG3106	COG3106 Predicted ATPase
LDH65_12245	COG1983	PspC domain protein
LDH65_12255	COG1842	Phage shock protein A
LDH65_12260	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LDH65_12270	COG4166	transmembrane transport
LDH65_12275	COG4168	peptide transport system, permease
LDH65_12280	COG4171	peptide transport system, permease
LDH65_12290	COG4172	Belongs to the ABC transporter superfamily
LDH65_12295	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LDH65_12295	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LDH65_12300	COG3104	oligopeptide transport
LDH65_12315	COG0625	glutathione transferase activity
LDH65_12335	COG3895	Periplasmic Protein
LDH65_12345	COG3133	Outer membrane lipoprotein
LDH65_12355	COG4989	oxidoreductase activity
LDH65_12360	COG3313	Fe-S protein
LDH65_12365	COG2194	sulfuric ester hydrolase activity
LDH65_12370	COG1309	transcriptional regulator
LDH65_12375	COG1902	pentaerythritol trinitrate reductase activity
LDH65_12385	COG0346	lactoylglutathione lyase activity
LDH65_12390	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LDH65_12400	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LDH65_12405	COG0791	NLP P60 protein
LDH65_12425	COG0583	DNA-binding transcription factor activity
LDH65_12430	COG2814	Major facilitator Superfamily
LDH65_12435	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LDH65_12440	COG0307	riboflavin synthase, alpha
LDH65_12485	COG1376	ErfK ybiS ycfS ynhG family protein
LDH65_12485	COG1388	LysM domain
LDH65_12500	COG0719	Fe-S assembly protein
LDH65_12505	COG0396	ATPase activity
LDH65_12510	COG0719	Fe-S assembly protein
LDH65_12515	COG0316	Belongs to the HesB IscA family
LDH65_12520	COG2050	protein possibly involved in aromatic compounds catabolism
LDH65_12525	COG0247	lactate metabolic process
LDH65_12525	COG0277	FAD linked oxidase domain protein
LDH65_12530	COG0628	permease
LDH65_12540	COG0574	Belongs to the PEP-utilizing enzyme family
LDH65_12540	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LDH65_12565	COG0791	NLP P60 protein
LDH65_12615	COG0386	Belongs to the glutathione peroxidase family
LDH65_12630	COG0776	regulation of translation
LDH65_12635	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LDH65_12635	COG0072	phenylalanine-tRNA ligase activity
LDH65_12670	COG4249	Peptidase C14 caspase catalytic subunit p20
LDH65_12690	COG0803	Belongs to the bacterial solute-binding protein 9 family
LDH65_12695	COG1121	(ABC) transporter
LDH65_12700	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LDH65_12705	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LDH65_12715	COG3001	Fructosamine kinase
LDH65_12725	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LDH65_12730	COG3328	transposase activity
LDH65_12735	COG2223	nitrite transmembrane transporter activity
LDH65_12755	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LDH65_12780	COG3122	Protein conserved in bacteria
LDH65_12800	COG0534	Mate efflux family protein
LDH65_12815	COG4948	Mandelate Racemase Muconate Lactonizing
LDH65_12825	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_12830	COG3011	Protein conserved in bacteria
LDH65_12835	COG2271	Major facilitator Superfamily
LDH65_12840	COG1388	LysM domain
LDH65_12840	COG1470	cell adhesion involved in biofilm formation
LDH65_12875	COG2925	Exonuclease
LDH65_12885	COG0531	amino acid
LDH65_12890	COG0371	Dehydrogenase
LDH65_12895	COG1129	ABC transporter
LDH65_12900	COG1129	ABC transporter
LDH65_12905	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_12915	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LDH65_12930	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LDH65_12940	COG0131	Imidazoleglycerol-phosphate dehydratase
LDH65_12940	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LDH65_12960	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LDH65_12960	COG0140	phosphoribosyl-ATP diphosphatase activity
LDH65_12970	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LDH65_12975	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LDH65_12990	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LDH65_12995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LDH65_13000	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LDH65_13005	COG1120	ATPase activity
LDH65_13020	COG3486	L-lysine 6-monooxygenase (NADPH) activity
LDH65_13025	COG0076	glutamate decarboxylase activity
LDH65_13030	COG4114	ferric iron reductase
LDH65_13035	COG1253	flavin adenine dinucleotide binding
LDH65_13040	COG2982	Protein involved in outer membrane biogenesis
LDH65_13055	COG0489	protein tyrosine kinase activity
LDH65_13085	COG2814	Major facilitator Superfamily
LDH65_13095	COG1346	cytolysis
LDH65_13110	COG2949	membrane
LDH65_13115	COG4211	Belongs to the binding-protein-dependent transport system permease family
LDH65_13130	COG2311	Membrane
LDH65_13140	COG0477	Major facilitator Superfamily
LDH65_13145	COG0583	DNA-binding transcription factor activity
LDH65_13175	COG1136	(ABC) transporter
LDH65_13185	COG0303	'Molybdopterin
LDH65_13195	COG3328	transposase activity
LDH65_13205	COG0488	(ABC) transporter
LDH65_13335	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LDH65_13340	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LDH65_13350	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_13355	COG1024	Enoyl-CoA hydratase
LDH65_13365	COG3425	synthase
LDH65_13370	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_13375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LDH65_13380	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LDH65_13390	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_13415	COG2920	part of a sulfur-relay system
LDH65_13435	COG1832	CoA-binding protein
LDH65_13450	COG0210	DNA helicase
LDH65_13455	COG3304	Inner membrane component domain
LDH65_13460	COG1289	transmembrane transporter activity
LDH65_13465	COG3070	regulator of competence-specific genes
LDH65_13490	COG1067	ATP-dependent peptidase activity
LDH65_13530	COG3130	regulation of translation
LDH65_13535	COG3009	Protein conserved in bacteria
LDH65_13550	COG3008	intermembrane lipid transfer
LDH65_13550	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LDH65_13555	COG2995	paraquat-inducible protein a
LDH65_13560	COG0488	(ABC) transporter
LDH65_13570	COG0633	Ferredoxin
LDH65_13570	COG3217	Mosc domain protein beta barrel domain protein
LDH65_13585	COG0308	aminopeptidase N
LDH65_13605	COG1448	Aminotransferase
LDH65_13615	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LDH65_13620	COG3108	Peptidase M15
LDH65_13625	COG2989	Protein conserved in bacteria
LDH65_13650	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LDH65_13655	COG3173	Aminoglycoside phosphotransferase
LDH65_13670	COG1278	Cold shock
LDH65_13675	COG5383	Protein conserved in bacteria
LDH65_13690	COG0658	competence protein
LDH65_13690	COG2333	competence protein COMEC
LDH65_13700	COG0539	negative regulation of cytoplasmic translation
LDH65_13725	COG5295	Hep Hag repeat protein
LDH65_13725	COG5295	Hep Hag repeat protein
LDH65_13730	COG0252	asparaginase activity
LDH65_13735	COG1944	ATP diphosphatase activity
LDH65_13740	COG2116	formate transmembrane transporter activity
LDH65_13745	COG1882	Formate acetyltransferase
LDH65_13755	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDH65_13770	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LDH65_13780	COG1674	ftsk spoiiie
LDH65_13780	COG3107	peptidoglycan biosynthetic process
LDH65_13790	COG0492	ferredoxin-NADP+ reductase activity
LDH65_13800	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LDH65_13810	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LDH65_13820	COG0542	response to heat
LDH65_13830	COG1278	Cold shock
LDH65_13840	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LDH65_13845	COG2990	Protein conserved in bacteria
LDH65_13850	COG3593	DNA synthesis involved in DNA repair
LDH65_13855	COG2431	L-lysine efflux transmembrane transporter activity
LDH65_13865	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LDH65_13870	COG0028	Belongs to the TPP enzyme family
LDH65_13875	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
LDH65_13880	COG0702	epimerase
LDH65_13885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LDH65_13895	COG1605	Chorismate mutase
LDH65_13900	COG1126	abc transporter atp-binding protein
LDH65_13905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_13910	COG4215	(ABC) transporter
LDH65_13915	COG4160	amino acid transport
LDH65_13940	COG1120	ATPase activity
LDH65_13970	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_13985	COG1177	transmembrane transport
LDH65_13990	COG1176	ABC-type spermidine putrescine transport system, permease component I
LDH65_13995	COG3842	ATPase activity
LDH65_14000	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LDH65_14030	COG0671	phosphoesterase, PA-phosphatase related
LDH65_14040	COG1349	DNA-binding transcription factor activity
LDH65_14045	COG0814	amino acid
LDH65_14050	COG1686	Belongs to the peptidase S11 family
LDH65_14055	COG2011	ABC-type metal ion transport system permease component
LDH65_14080	COG0625	glutathione transferase activity
LDH65_14085	COG4771	TonB-dependent receptor
LDH65_14095	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LDH65_14105	COG0833	amino acid
LDH65_14110	COG0583	DNA-binding transcription factor activity
LDH65_14115	COG2855	membrane
LDH65_14125	COG3188	usher protein
LDH65_14130	COG3121	Chaperone
LDH65_14145	COG3710	Transcriptional regulator
LDH65_14150	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LDH65_14150	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LDH65_14150	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LDH65_14155	COG1105	Belongs to the carbohydrate kinase PfkB family
LDH65_14165	COG0494	nUDIX hydrolase
LDH65_14175	COG1129	ABC transporter
LDH65_14210	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_14235	COG0246	Mannitol dehydrogenase
LDH65_14240	COG2186	Transcriptional regulator
LDH65_14245	COG0523	cobalamin synthesis protein
LDH65_14250	COG0671	phosphoesterase, PA-phosphatase related
LDH65_14255	COG0791	NLP P60 protein
LDH65_14260	COG2200	EAL domain
LDH65_14265	COG4166	transmembrane transport
LDH65_14270	COG4174	ABC transporter (Permease)
LDH65_14275	COG4239	(ABC) transporter, permease
LDH65_14280	COG4172	Belongs to the ABC transporter superfamily
LDH65_14290	COG2814	Major facilitator Superfamily
LDH65_14295	COG1187	pseudouridine synthase activity
LDH65_14300	COG1061	Type III restriction enzyme res subunit
LDH65_14320	COG3082	Protein of unknown function (DUF1414)
LDH65_14325	COG3083	sulfuric ester hydrolase activity
LDH65_14340	COG3157	Type VI secretion system effector, Hcp
LDH65_14360	COG2723	6-phospho-beta-galactosidase activity
LDH65_14365	COG1737	Transcriptional regulator
LDH65_14380	COG3299	homolog of phage Mu protein gp47
LDH65_14420	COG4386	tail sheath protein
LDH65_14440	COG3622	Belongs to the hyi family
LDH65_14445	COG1349	DNA-binding transcription factor activity
LDH65_14455	COG3395	kinase activity
LDH65_14495	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LDH65_14520	COG2223	nitrite transmembrane transporter activity
LDH65_14525	COG2198	Histidine kinase
LDH65_14525	COG0642	Histidine kinase
LDH65_14530	COG2198	Histidine kinase
LDH65_14530	COG0642	Histidine kinase
LDH65_14540	COG2205	protein histidine kinase activity
LDH65_14540	COG0784	Response regulator, receiver
LDH65_14565	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LDH65_14580	COG0814	amino acid
LDH65_14605	COG0697	spore germination
LDH65_14615	COG1982	Orn Lys Arg decarboxylase major
LDH65_14620	COG0531	amino acid
LDH65_14625	COG1174	glycine betaine transport
LDH65_14630	COG1125	glycine betaine transport
LDH65_14635	COG1174	glycine betaine transport
LDH65_14645	COG2897	thiosulfate sulfurtransferase activity
LDH65_14665	COG1122	ATPase activity
LDH65_14685	COG4807	Protein conserved in bacteria
LDH65_14700	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
LDH65_14710	COG2261	transglycosylase associated protein
LDH65_14730	COG0277	FAD linked oxidase domain protein
LDH65_14735	COG1686	Belongs to the peptidase S11 family
LDH65_14745	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDH65_14765	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LDH65_14775	COG0583	DNA-binding transcription factor activity
LDH65_14780	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LDH65_14805	COG0670	Belongs to the BI1 family
LDH65_14810	COG0314	molybdopterin synthase activity
LDH65_14815	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LDH65_14825	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LDH65_14830	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LDH65_14835	COG4628	conserved protein (DUF2132)
LDH65_14845	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDH65_14855	COG2226	methyltransferase
LDH65_14880	COG0561	phosphatase activity
LDH65_14890	COG4149	molybdate abc transporter
LDH65_14895	COG0725	ABC transporter, periplasmic molybdate-binding protein
LDH65_14905	COG3585	molybdate ion transport
LDH65_14905	COG2005	Transcriptional regulator
LDH65_14910	COG1119	ATPase activity
LDH65_14920	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LDH65_14925	COG1085	galactose-1-phosphate uridylyltransferase
LDH65_14940	COG2017	converts alpha-aldose to the beta-anomer
LDH65_14955	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDH65_14970	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDH65_14975	COG1230	cation diffusion facilitator family transporter
LDH65_15005	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
LDH65_15010	COG2885	chlorophyll binding
LDH65_15020	COG3064	Membrane
LDH65_15020	COG3064	Membrane
LDH65_15025	COG0848	biopolymer transport protein
LDH65_15030	COG0811	peptide transport
LDH65_15035	COG0824	Thioesterase
LDH65_15040	COG3790	cyd operon protein YbgE
LDH65_15045	COG4890	Cyd operon protein YbgT
LDH65_15050	COG1294	oxidase, subunit
LDH65_15055	COG1271	oxidase subunit
LDH65_15060	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LDH65_15070	COG0508	dehydrogenase complex catalyzes the overall conversion of
LDH65_15075	COG0567	Dehydrogenase, E1 component
LDH65_15085	COG1053	succinate dehydrogenase
LDH65_15090	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LDH65_15095	COG2009	succinate dehydrogenase
LDH65_15110	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LDH65_15115	COG0497	DNA recombination
LDH65_15120	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LDH65_15130	COG2867	negative regulation of translational initiation
LDH65_15150	COG0582	viral genome integration into host DNA
LDH65_15210	COG3657	addiction module killer protein
LDH65_15240	COG1953	Uracil, thiamine, allantoin
LDH65_15260	COG2226	methyltransferase
LDH65_15265	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LDH65_15270	COG0741	lytic transglycosylase activity
LDH65_15270	COG1388	LysM domain
LDH65_15285	COG0656	L-ascorbic acid biosynthetic process
LDH65_15315	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LDH65_15325	COG2011	ABC-type metal ion transport system permease component
LDH65_15330	COG1464	Belongs to the NlpA lipoprotein family
LDH65_15340	COG1720	tRNA m6t6A37 methyltransferase activity
LDH65_15350	COG3015	lipoprotein NlpE involved in copper resistance
LDH65_15360	COG4681	YaeQ
LDH65_15370	COG4568	rho-dependent transcription termination
LDH65_15380	COG0037	tRNA processing
LDH65_15385	COG0346	lactoylglutathione lyase activity
LDH65_15395	COG0587	DNA-directed DNA polymerase activity
LDH65_15420	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LDH65_15435	COG0750	zinc metalloprotease
LDH65_15440	COG0575	Belongs to the CDS family
LDH65_15500	COG0564	pseudouridine synthase activity
LDH65_15505	COG3098	single-species biofilm formation
LDH65_15525	COG1611	Belongs to the LOG family
LDH65_15540	COG2363	Small membrane protein
LDH65_15545	COG0583	DNA-binding transcription factor activity
LDH65_15555	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LDH65_15560	COG2166	iron-sulfur cluster assembly
LDH65_15565	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LDH65_15570	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
LDH65_15585	COG0860	N-Acetylmuramoyl-L-alanine amidase
LDH65_15595	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LDH65_15600	COG1074	ATP-dependent DNA helicase activity
LDH65_15610	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LDH65_15670	COG0667	Aldo Keto reductase
LDH65_15700	COG1609	Transcriptional regulator
LDH65_15710	COG0583	DNA-binding transcription factor activity
LDH65_15715	COG2814	Major facilitator Superfamily
LDH65_15720	COG0583	DNA-binding transcription factor activity
LDH65_15735	COG0840	transmembrane signaling receptor activity
LDH65_15780	COG2165	general secretion pathway protein
LDH65_15805	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LDH65_15825	COG0288	reversible hydration of carbon dioxide
LDH65_15870	COG3119	arylsulfatase activity
LDH65_15875	COG1349	DNA-binding transcription factor activity
LDH65_15885	COG2222	sugar isomerase
LDH65_15890	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LDH65_15895	COG3715	PTS system
LDH65_15900	COG3716	PTS system mannose fructose sorbose family IID component
LDH65_15905	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
LDH65_15915	COG1028	Short-chain dehydrogenase reductase Sdr
LDH65_15925	COG0641	radical SAM
LDH65_15930	COG3119	arylsulfatase activity
LDH65_15955	COG2271	Major facilitator Superfamily
LDH65_15975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LDH65_15975	COG1263	PTS System
LDH65_15980	COG1874	Beta-galactosidase
LDH65_15985	COG3867	Arabinogalactan endo-beta-1,4-galactanase
LDH65_15990	COG3833	ABC-type maltose transport systems, permease component
LDH65_15995	COG1175	transmembrane transport
LDH65_16000	COG2182	Extracellular solute-binding protein
LDH65_16010	COG1129	ABC transporter
LDH65_16015	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_16020	COG1879	ABC-type sugar transport system periplasmic component
LDH65_16030	COG0791	NLP P60 protein
LDH65_16040	COG1695	Transcriptional regulator
LDH65_16130	COG2944	sequence-specific DNA binding
LDH65_16155	COG0582	viral genome integration into host DNA
LDH65_16175	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LDH65_16180	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LDH65_16185	COG4974	Belongs to the 'phage' integrase family
LDH65_16190	COG0716	FMN binding
LDH65_16195	COG4452	Inner membrane protein CreD
LDH65_16220	COG0745	RESPONSE REGULATOR receiver
LDH65_16245	COG1272	protein, Hemolysin III
LDH65_16290	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LDH65_16295	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LDH65_16300	COG0006	proline dipeptidase activity
LDH65_16320	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LDH65_16330	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LDH65_16365	COG0191	fructose-bisphosphate aldolase activity
LDH65_16385	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LDH65_16390	COG0501	Belongs to the peptidase M48B family
LDH65_16400	COG1166	arginine decarboxylase activity
LDH65_16415	COG2356	endonuclease I
LDH65_16420	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LDH65_16425	COG0189	ligase activity
LDH65_16440	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDH65_16450	COG2805	Type II/IV secretion system protein
LDH65_16455	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LDH65_16460	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LDH65_16465	COG0762	integral membrane protein
LDH65_16475	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LDH65_16480	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LDH65_16485	COG3064	Membrane
LDH65_16485	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
LDH65_16485	COG1073	alpha beta
LDH65_16500	COG3171	Protein conserved in bacteria
LDH65_16510	COG1194	a g-specific adenine glycosylase
LDH65_16530	COG4774	siderophore transport
LDH65_16535	COG1172	Belongs to the binding-protein-dependent transport system permease family
LDH65_16540	COG1129	ABC transporter
LDH65_16545	COG1879	ABC-type sugar transport system periplasmic component
LDH65_16550	COG1982	Orn Lys Arg decarboxylase major
LDH65_16670	COG3916	Acyl-homoserine-lactone synthase
LDH65_16675	COG2771	luxR family
LDH65_16725	COG2211	Major facilitator Superfamily
LDH65_16745	COG0471	metal ion transport
LDH65_16760	COG3209	COG3209 Rhs family protein
LDH65_16770	COG3501	Rhs element vgr protein
LDH65_16785	COG2610	gluconate transmembrane transporter activity
LDH65_16800	COG1132	(ABC) transporter
LDH65_16805	COG1132	(ABC) transporter
LDH65_16805	COG2375	cellular response to nickel ion
LDH65_16830	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LDH65_16830	COG2226	methyltransferase
LDH65_16830	COG3433	isochorismatase activity
LDH65_16840	COG2226	methyltransferase
LDH65_16840	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LDH65_16840	COG3433	isochorismatase activity
LDH65_16860	COG4771	TonB-dependent receptor
LDH65_16865	COG2195	Cleaves the N-terminal amino acid of tripeptides
LDH65_16870	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
LDH65_16915	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LDH65_16925	COG5001	Diguanylate cyclase
LDH65_16965	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LDH65_16970	COG1191	sigma factor activity
LDH65_16995	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LDH65_17015	COG3710	Transcriptional regulator
LDH65_17035	COG1256	bacterial-type flagellum assembly
LDH65_17045	COG1706	bacterial-type flagellum-dependent cell motility
LDH65_17055	COG4786	Flagellar basal body rod
LDH65_17075	COG1749	Flagellar hook protein flgE
LDH65_17080	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
LDH65_17085	COG1558	bacterial-type flagellum-dependent cell motility
LDH65_17090	COG1815	bacterial-type flagellum-dependent cell motility
LDH65_17095	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
LDH65_17135	COG1677	Flagellar hook-basal body complex protein FliE
LDH65_17160	COG1987	bacterial-type flagellum assembly
LDH65_17165	COG1684	flagellar biosynthetic protein fliR
LDH65_17170	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LDH65_17190	COG4592	Periplasmic binding protein
LDH65_17230	COG4964	Belongs to the GSP D family
LDH65_17235	COG4964	Belongs to the GSP D family
LDH65_17285	COG0848	biopolymer transport protein
LDH65_17290	COG0811	peptide transport
LDH65_17295	COG0626	cystathionine gamma-synthase activity
LDH65_17300	COG0586	Pfam SNARE associated Golgi protein
LDH65_17305	COG2207	Transcriptional regulator
LDH65_17310	COG1979	alcohol dehydrogenase
LDH65_17320	COG0656	L-ascorbic acid biosynthetic process
LDH65_17330	COG2132	Multicopper oxidase
LDH65_17340	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDH65_17350	COG2249	NAD(P)H dehydrogenase (quinone) activity
LDH65_17355	COG0583	DNA-binding transcription factor activity
LDH65_17365	COG3150	esterase
LDH65_17370	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LDH65_17375	COG3151	Protein conserved in bacteria
LDH65_17380	COG0494	nUDIX hydrolase
LDH65_17385	COG1538	Outer membrane efflux protein
LDH65_17395	COG0754	glutathionylspermidine amidase activity
LDH65_17400	COG3384	dioxygenase
LDH65_17420	COG0531	amino acid
LDH65_17435	COG3025	triphosphatase activity
LDH65_17440	COG4991	sh3 domain protein
LDH65_17455	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LDH65_17470	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LDH65_17475	COG0358	DNA primase activity
LDH65_17560	COG0251	oxidation-reduction process
LDH65_17585	COG0436	Aminotransferase
LDH65_17605	COG1289	transmembrane transporter activity
LDH65_17625	COG0395	ABC-type sugar transport system, permease component
LDH65_17635	COG2182	Extracellular solute-binding protein
LDH65_17640	COG1609	Transcriptional regulator
LDH65_17645	COG3459	Glycosyltransferase 36 associated
LDH65_17650	COG3842	ATPase activity
LDH65_17670	COG3210	domain, Protein
LDH65_17675	COG3210	domain, Protein
LDH65_17705	COG3210	domain, Protein
LDH65_17710	COG2831	hemolysin activation secretion protein
LDH65_17715	COG4245	von Willebrand factor, type A
LDH65_17745	COG3247	response to pH
LDH65_17750	COG1902	pentaerythritol trinitrate reductase activity
LDH65_17750	COG0446	pyridine nucleotide-disulphide oxidoreductase
LDH65_17765	COG1451	nucleotide metabolic process
LDH65_17770	COG0673	inositol 2-dehydrogenase activity
LDH65_17790	COG2721	sulfolactate sulfo-lyase activity
LDH65_17805	COG2271	Major facilitator Superfamily
LDH65_17820	COG0586	Pfam SNARE associated Golgi protein
LDH65_17835	COG4575	ribosome binding
LDH65_17840	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
LDH65_17850	COG2259	Doxx family
LDH65_17870	COG0494	nUDIX hydrolase
LDH65_17900	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LDH65_17905	COG0849	cell division
LDH65_17910	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LDH65_17930	COG0772	Belongs to the SEDS family
LDH65_17945	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LDH65_17950	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDH65_17955	COG0768	penicillin binding
LDH65_17960	COG3116	cell division
LDH65_17985	COG1609	Transcriptional regulator
LDH65_18005	COG0028	Belongs to the TPP enzyme family
LDH65_18010	COG1022	Amp-dependent synthetase and ligase
LDH65_18035	COG0473	3-isopropylmalate dehydrogenase activity
LDH65_18050	COG2814	Major facilitator Superfamily
LDH65_18080	COG4143	(ABC) transporter
LDH65_18085	COG1178	ABC-type Fe3 transport system permease component
LDH65_18090	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
LDH65_18095	COG0586	Pfam SNARE associated Golgi protein
LDH65_18100	COG0417	DNA replication proofreading
LDH65_18125	COG3047	cAMP biosynthetic process
LDH65_18125	COG2885	chlorophyll binding
LDH65_18215	COG0564	pseudouridine synthase activity
LDH65_18220	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LDH65_18270	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LDH65_18280	COG2966	Psort location CytoplasmicMembrane, score
LDH65_18285	COG1280	lysine exporter protein (LysE YggA)
LDH65_18290	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LDH65_18315	COG1047	Peptidyl-prolyl cis-trans
LDH65_18330	COG0196	riboflavin kinase activity
LDH65_18340	COG0583	DNA-binding transcription factor activity
LDH65_18360	COG1584	GPR1 FUN34 yaaH family protein
LDH65_18375	COG0521	Mo-molybdopterin cofactor biosynthetic process
LDH65_18420	COG0745	RESPONSE REGULATOR receiver
LDH65_18425	COG3045	CreA protein
LDH65_18430	COG2207	Transcriptional regulator
LDH65_18430	COG3708	Transcriptional regulator
LDH65_18445	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
LDH65_18450	COG0741	lytic transglycosylase activity
LDH65_18465	COG2199	diguanylate cyclase activity
LDH65_18470	COG2885	chlorophyll binding
LDH65_18495	COG0560	Phosphoserine phosphatase
LDH65_18500	COG3726	membrane protein affecting hemolysin expression
LDH65_18525	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LDH65_18530	COG0084	hydrolase, TatD family'
LDH65_18535	COG4667	esterase of the alpha-beta hydrolase superfamily
LDH65_18545	COG2823	Periplasmic or secreted lipoprotein
LDH65_18555	COG0456	acetyltransferase
LDH65_18560	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
LDH65_18600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LDH65_18605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LDH65_18620	COG0859	PFAM glycosyl transferase family 9
LDH65_18625	COG1070	Carbohydrate kinase
LDH65_18675	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LDH65_18675	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LDH65_18675	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LDH65_18680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LDH65_18685	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LDH65_18690	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LDH65_18695	COG2207	Transcriptional regulator
LDH65_18705	COG4269	membrane
LDH65_18760	COG1401	restriction endodeoxyribonuclease activity
LDH65_18775	COG3650	response to hydrogen peroxide
LDH65_18780	COG1960	acyl-CoA dehydrogenase activity
LDH65_18785	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDH65_18790	COG0557	exoribonuclease II activity
LDH65_18805	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
LDH65_18810	COG0330	HflC and HflK could
LDH65_18815	COG0330	HflC and HflK could
LDH65_18820	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LDH65_18840	COG0860	N-Acetylmuramoyl-L-alanine amidase
LDH65_18845	COG0802	atpase or kinase
LDH65_18850	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LDH65_18850	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LDH65_18855	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LDH65_18870	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LDH65_18885	COG1511	domain protein
LDH65_18885	COG3264	Mechanosensitive ion channel
LDH65_18900	COG1053	succinate dehydrogenase
LDH65_18905	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LDH65_18915	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
LDH65_18960	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LDH65_18975	COG3383	formate dehydrogenase (NAD+) activity
LDH65_18980	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LDH65_18985	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LDH65_18985	COG0493	'glutamate synthase
LDH65_18995	COG1309	transcriptional regulator
LDH65_19055	COG1454	alcohol dehydrogenase
LDH65_19065	COG0629	single-stranded DNA binding
LDH65_19070	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LDH65_19075	COG2315	Protein conserved in bacteria
LDH65_19080	COG1448	Aminotransferase
LDH65_19105	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDH65_19110	COG0735	belongs to the Fur family
LDH65_19120	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LDH65_19160	COG3121	Chaperone
LDH65_19220	COG1358	cellular component organization or biogenesis
LDH65_19245	COG3721	Heme iron utilization protein
LDH65_19250	COG0702	epimerase
LDH65_19260	COG4771	TonB-dependent receptor
LDH65_19265	COG3720	iron ion transport
LDH65_19270	COG4558	Periplasmic binding protein
LDH65_19275	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LDH65_19285	COG0626	cystathionine gamma-synthase activity
LDH65_19290	COG0814	amino acid
LDH65_19295	COG0583	DNA-binding transcription factor activity
LDH65_19300	COG0425	Belongs to the sulfur carrier protein TusA family
LDH65_19305	COG2391	methyltransferase activity
LDH65_19420	COG1301	dicarboxylic acid transport
LDH65_19430	COG3162	membrane
LDH65_19455	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LDH65_19470	COG0551	DNA topoisomerase type I activity
LDH65_19480	COG0758	DNA mediated transformation
LDH65_19510	COG3036	rescue of stalled ribosome
LDH65_19515	COG0789	Transcriptional regulator
LDH65_19530	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LDH65_19545	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LDH65_19550	COG0201	protein transport
LDH65_19560	COG1841	ribosomal large subunit assembly
LDH65_19600	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LDH65_19605	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LDH65_19615	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LDH65_19620	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LDH65_19630	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LDH65_19640	COG0089	rRNA binding
LDH65_19655	COG0051	transcription antitermination factor activity, RNA binding
LDH65_19685	COG0049	tRNA binding
LDH65_19690	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LDH65_19710	COG2964	Protein conserved in bacteria
LDH65_19715	COG0545	Peptidyl-prolyl cis-trans isomerase
LDH65_19725	COG1047	Peptidyl-prolyl cis-trans
LDH65_19730	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LDH65_19750	COG1216	Glycosyl transferase, family 2
LDH65_19760	COG2175	clavaminate synthase activity
LDH65_19765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LDH65_19775	COG4521	taurine ABC transporter
LDH65_19785	COG0429	hydrolase of the alpha beta-hydrolase fold
LDH65_19795	COG3954	Phosphoribulokinase
LDH65_19805	COG1765	OsmC-like protein
LDH65_19815	COG1289	transmembrane transporter activity
LDH65_19830	COG0433	COG0433 Predicted ATPase
LDH65_19835	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LDH65_19840	COG1486	melibiose metabolic process
LDH65_19860	COG0402	S-adenosylhomocysteine deaminase activity
LDH65_19865	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LDH65_19885	COG0180	Tryptophanyl-tRNA synthetase
LDH65_19890	COG0546	phosphoglycolate phosphatase activity
LDH65_19895	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LDH65_19920	COG4796	Type ii and iii secretion system protein
LDH65_19950	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LDH65_19955	COG0494	nUDIX hydrolase
LDH65_19965	COG1011	Hydrolase
LDH65_19970	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LDH65_19995	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LDH65_20000	COG2183	response to ionizing radiation
LDH65_20005	COG1918	ferrous iron import across plasma membrane
LDH65_20040	COG1640	4-alpha-glucanotransferase
LDH65_20055	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LDH65_20065	COG1349	DNA-binding transcription factor activity
LDH65_20080	COG0460	homoserine dehydrogenase
LDH65_20080	COG0527	aspartate kinase activity
LDH65_20095	COG4682	membrane
LDH65_20105	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LDH65_20115	COG1609	Transcriptional regulator
LDH65_20120	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LDH65_20135	COG1575	Belongs to the MenA family. Type 1 subfamily
LDH65_20175	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LDH65_20180	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LDH65_20185	COG1494	fructose-1,6-bisphosphatase
LDH65_20195	COG3152	Membrane
LDH65_20210	COG0583	DNA-binding transcription factor activity
LDH65_20215	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LDH65_20220	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LDH65_20225	COG0471	metal ion transport
LDH65_20285	COG3678	ATP-independent chaperone mediated protein folding
LDH65_20290	COG0745	RESPONSE REGULATOR receiver
LDH65_20295	COG2205	protein histidine kinase activity
LDH65_20300	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LDH65_20300	COG2169	Transcriptional regulator
LDH65_20305	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LDH65_20310	COG1045	serine acetyltransferase
LDH65_20325	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LDH65_20330	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LDH65_20340	COG4942	peptidase
LDH65_20355	COG0156	8-amino-7-oxononanoate synthase activity
LDH65_20365	COG0859	PFAM glycosyl transferase family 9
LDH65_20370	COG0859	PFAM glycosyl transferase family 9
LDH65_20375	COG1519	Transferase
LDH65_20410	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LDH65_20435	COG1561	YicC-like family, N-terminal region
LDH65_20440	COG2860	membrane
LDH65_20460	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LDH65_20465	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDH65_20470	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LDH65_20480	COG0786	glutamate:sodium symporter activity
LDH65_20485	COG2233	PERMEase
LDH65_20490	COG2982	Protein involved in outer membrane biogenesis
LDH65_20495	COG0456	acetyltransferase
LDH65_20520	COG1011	Hydrolase
LDH65_20530	COG0174	glutamine synthetase
LDH65_20535	COG3852	Histidine kinase
LDH65_20545	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LDH65_20565	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDH65_20565	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDH65_20570	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LDH65_20575	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LDH65_20580	COG3084	Protein conserved in bacteria
LDH65_20590	COG1763	Mo-molybdopterin cofactor biosynthetic process
LDH65_20595	COG3328	transposase activity
LDH65_20620	COG2186	Transcriptional regulator
LDH65_20625	COG0477	Major facilitator Superfamily
LDH65_20640	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDH65_20670	COG1522	sequence-specific DNA binding
LDH65_20675	COG0716	FMN binding
LDH65_20690	COG3312	ion transport
LDH65_20745	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LDH65_20750	COG0573	inorganic phosphate transmembrane transporter activity
LDH65_20755	COG0581	inorganic phosphate transmembrane transporter activity
LDH65_20765	COG0704	Plays a role in the regulation of phosphate uptake
LDH65_20775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LDH65_20780	COG0765	amino acid transport
LDH65_20785	COG0765	amino acid transport
LDH65_20790	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LDH65_20800	COG2252	PERMEase
LDH65_20835	COG0706	membrane insertase activity
LDH65_20850	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LDH65_20890	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
LDH65_20935	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
LDH65_21075	COG0515	serine threonine protein kinase
LDH65_21105	COG3328	transposase activity
LDH65_21135	COG5599	Phosphatase
LDH65_21140	COG1317	bacterial-type flagellum organization
LDH65_21150	COG4669	(LipO)protein
LDH65_21185	COG1450	Type ii and iii secretion system protein
LDH65_21200	COG2207	Transcriptional regulator
LDH65_21210	COG4792	protein secretion
LDH65_21215	COG4791	protein targeting
LDH65_21220	COG4794	Type iii secretion
LDH65_21225	COG4790	Type iii secretion
LDH65_21275	COG4789	Type iii secretion
LDH65_21295	COG0457	Tetratricopeptide repeat
LDH65_21320	COG4886	Leucine-rich repeat (LRR) protein
LDH65_21355	COG3177	Filamentation induced by cAMP protein fic
LDH65_21415	COG3609	addiction module antidote protein, CC2985 family
LDH65_21440	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDH65_21450	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LDH65_21505	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LDH65_21575	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LDH65_21580	COG1475	DNA binding
LDH65_21585	COG1475	DNA binding
LDH65_21685	COG1475	DNA binding
LDH65_21770	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LDH65_21805	COG3328	transposase activity