M478_1	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_100	PF06411	HdeA/HdeB family
M478_1000	PF07023	M478_1000
M478_1001	PF01641	SelR domain
M478_1002	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M478_1002	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
M478_1003	PF01263	Aldose 1-epimerase
M478_1004	PF06629	M478_1004
M478_1005	PF06798	M478_1005
M478_1005	PF08298	PrkA AAA domain
M478_1006	PF04285	M478_1006
M478_1007	PF00892	EamA-like transporter family
M478_1008	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_1008	PF03466	LysR substrate binding domain
M478_1009	PF02678	Pirin
M478_1009	PF05726	Pirin C-terminal cupin domain
M478_101	PF02254	TrkA-N domain
M478_101	PF07885	Ion channel
M478_1010	PF07690	Major Facilitator Superfamily
M478_1011	PF01266	FAD dependent oxidoreductase
M478_1012	PF04293	M478_1012
M478_1013	PF00392	Bacterial regulatory proteins, gntR family
M478_1013	PF07840	FadR C-terminal domain
M478_1014	PF06450	M478_1014
M478_1015	PF02600	Disulfide bond formation protein DsbB
M478_1018	PF00266	Aminotransferase class-V
M478_1019	PF07690	Major Facilitator Superfamily
M478_102	PF02537	M478_102
M478_1020	PF00872	M478_1020
M478_1021	PF00872	M478_1021
M478_1022	PF02413	M478_1022
M478_1025	PF09327	M478_1025
M478_1025	PF13550	M478_1025
M478_1028	PF06805	M478_1028
M478_103	PF02537	M478_103
M478_1030	PF13248	M478_1030
M478_1031	PF02498	M478_1031
M478_1033	PF03869	Arc-like DNA binding domain
M478_1035	PF00877	NlpC/P60 family
M478_1035	PF14464	Prokaryotic homologs of the JAB domain
M478_1036	PF05100	M478_1036
M478_1037	PF05939	M478_1037
M478_1038	PF06791	M478_1038
M478_1038	PF09718	M478_1038
M478_1039	PF08748	M478_1039
M478_104	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
M478_1040	PF02368	Bacterial Ig-like domain (group 2)
M478_1040	PF08813	M478_1040
M478_1041	PF13554	Bacteriophage related domain of unknown function
M478_1046	PF02368	Bacterial Ig-like domain (group 2)
M478_1049	PF13264	M478_1049
M478_105	PF02378	Phosphotransferase system, EIIC
M478_1052	PF00872	M478_1052
M478_1054	PF10045	M478_1054
M478_1056	PF03374	M478_1056
M478_1058	PF03245	M478_1058
M478_1059	PF00959	Phage lysozyme
M478_106	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
M478_1060	PF16080	M478_1060
M478_1064	PF02498	M478_1064
M478_1065	PF06530	M478_1065
M478_1066	PF05766	M478_1066
M478_1067	PF05772	NinB protein
M478_1068	PF02086	D12 class N6 adenine-specific DNA methyltransferase
M478_1069	PF06806	Putative excisionase (DUF1233)
M478_107	PF07883	Cupin domain
M478_107	PF12833	Helix-turn-helix domain
M478_1070	PF01695	IstB-like ATP binding protein
M478_1071	PF00665	Integrase core domain
M478_1071	PF02796	Helix-turn-helix domain of resolvase
M478_1072	PF00589	Phage integrase family
M478_1072	PF12167	M478_1072
M478_1073	PF03692	M478_1073
M478_1074	PF01557	Fumarylacetoacetate (FAA) hydrolase family
M478_1075	PF13406	Transglycosylase SLT domain
M478_1076	PF05166	YcgL domain
M478_1077	PF03775	Septum formation inhibitor MinC, C-terminal domain
M478_1077	PF05209	Septum formation inhibitor MinC, N-terminal domain
M478_1078	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
M478_1079	PF03776	Septum formation topological specificity factor MinE
M478_108	PF04794	YdjC-like protein
M478_1080	PF00570	HRDC domain
M478_1080	PF01612	3'-5' exonuclease
M478_1081	PF00501	AMP-binding enzyme
M478_1081	PF13193	AMP-binding enzyme C-terminal domain
M478_1083	PF00814	Glycoprotease family
M478_1084	PF06733	DEAD_2
M478_1084	PF13307	Helicase C-terminal domain
M478_1085	PF01042	Endoribonuclease L-PSP
M478_1086	PF00893	Small Multidrug Resistance protein
M478_1087	PF00893	Small Multidrug Resistance protein
M478_1088	PF01081	KDPG and KHG aldolase
M478_1090	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
M478_1090	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
M478_1091	PF01380	SIS domain
M478_1091	PF01418	Helix-turn-helix domain, rpiR family
M478_1092	PF00224	Pyruvate kinase, barrel domain
M478_1092	PF02887	Pyruvate kinase, alpha/beta domain
M478_1093	PF03279	M478_1093
M478_1094	PF01551	Peptidase family M23
M478_1094	PF04225	Opacity-associated protein A LysM-like domain
M478_1094	PF08525	M478_1094
M478_1095	PF01297	Periplasmic solute binding protein family
M478_1096	PF00005	ABC transporter
M478_1097	PF00950	M478_1097
M478_1098	PF05491	Holliday junction DNA helicase ruvB C-terminus
M478_1098	PF05496	Holliday junction DNA helicase ruvB N-terminus
M478_1099	PF01330	RuvA N terminal domain
M478_1099	PF07499	RuvA, C-terminal domain
M478_1099	PF14520	Helix-hairpin-helix domain
M478_11	PF00005	ABC transporter
M478_11	PF00664	ABC transporter transmembrane region
M478_1100	PF02075	Crossover junction endodeoxyribonuclease RuvC
M478_1101	PF01709	Transcriptional regulator
M478_1102	PF00293	NUDIX domain
M478_1103	PF00152	tRNA synthetases class II (D, K and N)
M478_1103	PF01336	OB-fold nucleic acid binding domain
M478_1103	PF02938	GAD domain
M478_1104	PF01904	Protein of unknown function DUF72
M478_1105	PF01124	MAPEG family
M478_1106	PF13649	Methyltransferase domain
M478_1107	PF08003	Protein of unknown function (DUF1698)
M478_1108	PF03932	CutC family
M478_1109	PF06185	YecM protein
M478_111	PF03925	SeqA protein
M478_111	PF17206	M478_111
M478_1110	PF00750	tRNA synthetases class I (R)
M478_1110	PF03485	Arginyl tRNA synthetase N terminal domain
M478_1110	PF05746	DALR anticodon binding domain
M478_1111	PF05860	haemagglutination activity domain
M478_1111	PF13332	M478_1111
M478_1112	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
M478_1112	PF08479	POTRA domain, ShlB-type
M478_1112	PF17287	M478_1112
M478_1113	PF03023	M478_1113
M478_1114	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_1115	PF13302	Acetyltransferase (GNAT) domain
M478_1116	PF07690	Major Facilitator Superfamily
M478_1117	PF07273	Protein of unknown function (DUF1439)
M478_1118	PF02613	Nitrate reductase delta subunit
M478_1119	PF02811	PHP domain
M478_112	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
M478_112	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
M478_112	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
M478_112	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
M478_1121	PF00480	ROK family
M478_1121	PF13412	Winged helix-turn-helix DNA-binding
M478_1122	PF03009	Glycerophosphoryl diester phosphodiesterase family
M478_1123	PF00005	ABC transporter
M478_1124	PF01797	Transposase IS200 like
M478_1125	PF00005	ABC transporter
M478_1126	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1127	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1128	PF13416	Bacterial extracellular solute-binding protein
M478_1129	PF03009	Glycerophosphoryl diester phosphodiesterase family
M478_1132	PF00916	M478_1132
M478_1132	PF01740	STAS domain
M478_1133	PF00793	DAHP synthetase I family
M478_1134	PF13369	M478_1134
M478_1134	PF13371	Tetratricopeptide repeat
M478_1135	PF04247	M478_1135
M478_1136	PF13847	Methyltransferase domain
M478_1137	PF00472	RF-1 domain
M478_1137	PF03462	PCRF domain
M478_1138	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
M478_1138	PF01488	Shikimate / quinate 5-dehydrogenase
M478_1138	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
M478_1139	PF03550	Outer membrane lipoprotein LolB
M478_1140	PF00288	GHMP kinases N terminal domain
M478_1140	PF08544	GHMP kinases C terminal
M478_1141	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
M478_1141	PF14572	Phosphoribosyl synthetase-associated domain
M478_1142	PF10762	M478_1142
M478_1143	PF01195	Peptidyl-tRNA hydrolase
M478_1144	PF01926	50S ribosome-binding GTPase
M478_1144	PF06071	Protein of unknown function (DUF933)
M478_1146	PF00665	Integrase core domain
M478_1147	PF00581	Rhodanese-like domain
M478_1148	PF07859	alpha/beta hydrolase fold
M478_115	PF00892	EamA-like transporter family
M478_1150	PF13316	M478_1150
M478_1151	PF14358	M478_1151
M478_1152	PF12682	Flavodoxin
M478_1153	PF01738	Dienelactone hydrolase family
M478_1154	PF00072	Response regulator receiver domain
M478_1154	PF00486	Transcriptional regulatory protein, C terminal
M478_1155	PF00512	His Kinase A (phospho-acceptor) domain
M478_1155	PF00672	HAMP domain
M478_1155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_1156	PF02627	Carboxymuconolactone decarboxylase family
M478_1157	PF07883	Cupin domain
M478_1158	PF12697	Alpha/beta hydrolase family
M478_1159	PF13646	HEAT repeats
M478_116	PF00072	Response regulator receiver domain
M478_116	PF00486	Transcriptional regulatory protein, C terminal
M478_1163	PF00106	short chain dehydrogenase
M478_1164	PF08242	Methyltransferase domain
M478_1165	PF02502	Ribose/Galactose Isomerase
M478_1165	PF12408	Ribose-5-phosphate isomerase
M478_1166	PF13226	M478_1166
M478_1168	PF07661	M478_1168
M478_1168	PF08238	Sel1 repeat
M478_1169	PF00872	M478_1169
M478_117	PF00512	His Kinase A (phospho-acceptor) domain
M478_117	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_117	PF02702	Osmosensitive K+ channel His kinase sensor domain
M478_117	PF13492	GAF domain
M478_117	PF13493	Domain of unknown function (DUF4118)
M478_1172	PF04101	Glycosyltransferase family 28 C-terminal domain
M478_1174	PF13506	Glycosyl transferase family 21
M478_1175	PF01370	NAD dependent epimerase/dehydratase family
M478_1177	PF00753	Metallo-beta-lactamase superfamily
M478_1178	PF01370	NAD dependent epimerase/dehydratase family
M478_1179	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
M478_118	PF02669	M478_118
M478_1180	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
M478_1181	PF00425	chorismate binding enzyme
M478_1182	PF05962	HutD
M478_1183	PF01979	Amidohydrolase family
M478_1184	PF00392	Bacterial regulatory proteins, gntR family
M478_1184	PF07702	UTRA domain
M478_1185	PF01979	Amidohydrolase family
M478_1186	PF05013	N-formylglutamate amidohydrolase
M478_1187	PF01695	IstB-like ATP binding protein
M478_1189	PF00665	Integrase core domain
M478_1189	PF02796	Helix-turn-helix domain of resolvase
M478_119	PF00122	E1-E2 ATPase
M478_119	PF00702	haloacid dehalogenase-like hydrolase
M478_1191	PF08402	TOBE domain
M478_1192	PF00005	ABC transporter
M478_1193	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1194	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1195	PF01547	Bacterial extracellular solute-binding protein
M478_1196	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_1197	PF00392	Bacterial regulatory proteins, gntR family
M478_1197	PF07702	UTRA domain
M478_12	PF03992	Antibiotic biosynthesis monooxygenase
M478_120	PF03814	M478_120
M478_1203	PF00872	M478_1203
M478_1204	PF00872	M478_1204
M478_1205	PF13676	TIR domain
M478_1206	PF14384	M478_1206
M478_1207	PF04365	Protein of unknown function (DUF497)
M478_1208	PF04717	Phage-related baseplate assembly protein
M478_1209	PF04965	Gene 25-like lysozyme
M478_121	PF10725	M478_121
M478_1211	PF10908	M478_1211
M478_1214	PF01527	Transposase
M478_1215	PF00665	Integrase core domain
M478_1215	PF13565	M478_1215
M478_1216	PF05638	Protein of unknown function (DUF796)
M478_122	PF08349	M478_122
M478_1220	PF03796	DnaB-like helicase C terminal domain
M478_1225	PF01066	CDP-alcohol phosphatidyltransferase
M478_1226	PF01541	GIY-YIG catalytic domain
M478_1226	PF02151	UvrB/uvrC motif
M478_1226	PF08459	UvrC Helix-hairpin-helix N-terminal
M478_1226	PF14520	Helix-hairpin-helix domain
M478_1227	PF00072	Response regulator receiver domain
M478_1227	PF00196	Bacterial regulatory proteins, luxR family
M478_1228	PF10769	M478_1228
M478_1229	PF06942	M478_1229
M478_123	PF00875	DNA photolyase
M478_123	PF03441	FAD binding domain of DNA photolyase
M478_1231	PF13505	Outer membrane protein beta-barrel domain
M478_1233	PF00324	Amino acid permease
M478_1234	PF01344	Kelch motif
M478_1235	PF03358	NADPH-dependent FMN reductase
M478_1236	PF04261	Dyp-type peroxidase family
M478_1237	PF09375	Imelysin
M478_1237	PF13473	Cupredoxin-like domain
M478_1238	PF03239	M478_1238
M478_1239	PF00474	Sodium:solute symporter family
M478_124	PF02112	M478_124
M478_1241	PF00171	Aldehyde dehydrogenase family
M478_1241	PF01619	Proline dehydrogenase
M478_1241	PF14850	DNA-binding domain of Proline dehydrogenase
M478_1244	PF00005	ABC transporter
M478_1245	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1246	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_1247	PF00291	Pyridoxal-phosphate dependent enzyme
M478_1248	PF02899	Phage integrase, N-terminal SAM-like domain
M478_1249	PF04539	Sigma-70 region 3
M478_1249	PF04542	Sigma-70 region 2
M478_1249	PF04545	Sigma-70, region 4
M478_125	PF01784	NIF3 (NGG1p interacting factor 3)
M478_1250	PF00669	Bacterial flagellin N-terminal helical region
M478_1250	PF00700	Bacterial flagellin C-terminal helical region
M478_1251	PF02465	M478_1251
M478_1251	PF07195	M478_1251
M478_1251	PF07196	Flagellin hook IN motif
M478_1252	PF02561	Flagellar protein FliS
M478_1253	PF05400	Flagellar protein FliT
M478_1254	PF12833	Helix-turn-helix domain
M478_1256	PF13487	HD domain
M478_1257	PF00730	HhH-GPD superfamily base excision DNA repair protein
M478_1258	PF02661	Fic/DOC family
M478_1260	PF02049	M478_1260
M478_1261	PF01514	Secretory protein of YscJ/FliF family
M478_1261	PF08345	M478_1261
M478_1262	PF01706	FliG C-terminal domain
M478_1262	PF14841	FliG middle domain
M478_1262	PF14842	FliG N-terminal domain
M478_1263	PF02108	M478_1263
M478_1264	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M478_1265	PF02050	Flagellar FliJ protein
M478_1266	PF02120	Flagellar hook-length control protein FliK
M478_1267	PF03748	M478_1267
M478_1268	PF01052	Surface presentation of antigens (SPOA)
M478_1268	PF02154	Flagellar motor switch protein FliM
M478_1269	PF01052	Surface presentation of antigens (SPOA)
M478_1269	PF16973	M478_1269
M478_127	PF02682	Allophanate hydrolase subunit 1
M478_1270	PF04347	M478_1270
M478_1271	PF00813	M478_1271
M478_1272	PF01313	M478_1272
M478_1273	PF01311	M478_1273
M478_1274	PF07927	YcfA-like protein
M478_1275	PF15919	M478_1275
M478_1276	PF00294	pfkB family carbohydrate kinase
M478_1277	PF02653	M478_1277
M478_1278	PF00005	ABC transporter
M478_1279	PF13407	Periplasmic binding protein domain
M478_128	PF02626	Allophanate hydrolase subunit 2
M478_1280	PF02653	M478_1280
M478_1281	PF00596	Class II Aldolase and Adducin N-terminal domain
M478_1281	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_1282	PF04198	Putative sugar-binding domain
M478_1283	PF00669	Bacterial flagellin N-terminal helical region
M478_1284	PF00460	Flagella basal body rod protein
M478_1284	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_1285	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
M478_1285	PF10135	M478_1285
M478_1286	PF02119	M478_1286
M478_1287	PF02107	M478_1287
M478_1288	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_1289	PF00460	Flagella basal body rod protein
M478_129	PF03746	LamB/YcsF family
M478_1290	PF00460	Flagella basal body rod protein
M478_1290	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_1290	PF07559	Flagellar basal body protein FlaE
M478_1291	PF03963	M478_1291
M478_1291	PF13860	FlgD Ig-like domain
M478_1291	PF13861	FlgD Tudor-like domain
M478_1292	PF00460	Flagella basal body rod protein
M478_1292	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_1293	PF00460	Flagella basal body rod protein
M478_1294	PF13144	SAF-like
M478_1295	PF04316	Anti-sigma-28 factor, FlgM
M478_1296	PF05130	FlgN protein
M478_1297	PF02369	Bacterial Ig-like domain (group 1)
M478_1297	PF07979	Intimin C-type lectin domain
M478_1297	PF09134	Invasin, domain 3
M478_1297	PF11924	Protein of unknown function (DUF3442)
M478_1298	PF01797	Transposase IS200 like
M478_1299	PF11924	Protein of unknown function (DUF3442)
M478_13	PF08971	Glycogen synthesis protein
M478_130	PF06149	M478_130
M478_1300	PF06366	M478_1300
M478_1301	PF00771	FHIPEP family
M478_1302	PF01312	FlhB HrpN YscU SpaS Family
M478_1304	PF07377	Protein of unknown function (DUF1493)
M478_1305	PF10709	M478_1305
M478_1306	PF05425	M478_1306
M478_1307	PF04234	CopC domain
M478_1308	PF00210	Ferritin-like domain
M478_1309	PF06440	DNA polymerase III, theta subunit
M478_1310	PF00561	alpha/beta hydrolase fold
M478_1311	PF00326	Prolyl oligopeptidase family
M478_1311	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
M478_1312	PF13995	YebF-like protein
M478_1313	PF04266	ASCH domain
M478_1314	PF07130	YebG protein
M478_1315	PF00270	DEAD/DEAH box helicase
M478_1315	PF00271	Helicase conserved C-terminal domain
M478_1315	PF03880	DbpA RNA binding domain
M478_1316	PF02222	ATP-grasp domain
M478_1317	PF03701	M478_1317
M478_1318	PF00425	chorismate binding enzyme
M478_1318	PF04715	Anthranilate synthase component I, N terminal region
M478_1319	PF00293	NUDIX domain
M478_1320	PF03313	M478_1320
M478_1320	PF03315	Serine dehydratase beta chain
M478_1321	PF01613	Flavin reductase like domain
M478_1322	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
M478_1322	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
M478_1323	PF07690	Major Facilitator Superfamily
M478_1323	PF11700	M478_1323
M478_1324	PF03328	HpcH/HpaI aldolase/citrate lyase family
M478_1326	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
M478_1327	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
M478_1328	PF00171	Aldehyde dehydrogenase family
M478_1329	PF01557	Fumarylacetoacetate (FAA) hydrolase family
M478_133	PF01470	Pyroglutamyl peptidase
M478_1330	PF01557	Fumarylacetoacetate (FAA) hydrolase family
M478_1331	PF01047	MarR family
M478_1334	PF03610	PTS system fructose IIA component
M478_1334	PF03830	PTS system sorbose subfamily IIB component
M478_1335	PF03609	M478_1335
M478_1336	PF03613	M478_1336
M478_1337	PF06173	M478_1337
M478_1338	PF02659	M478_1338
M478_1339	PF00593	TonB dependent receptor
M478_1339	PF07715	TonB-dependent Receptor Plug Domain
M478_134	PF03167	Uracil DNA glycosylase superfamily
M478_1340	PF13426	PAS domain
M478_1341	PF00989	PAS fold
M478_1341	PF00990	GGDEF domain
M478_1341	PF13426	PAS domain
M478_1343	PF13847	Methyltransferase domain
M478_1344	PF02578	Multi-copper polyphenol oxidoreductase laccase
M478_1345	PF00313	'Cold-shock' DNA-binding domain
M478_1347	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
M478_1348	PF00324	Amino acid permease
M478_1349	PF13269	M478_1349
M478_135	PF01228	Glycine radical
M478_1350	PF10765	Protein of unknown function (DUF2591)
M478_1351	PF13974	M478_1351
M478_1352	PF13996	M478_1352
M478_1353	PF10964	M478_1353
M478_1355	PF12833	Helix-turn-helix domain
M478_1357	PF00005	ABC transporter
M478_1357	PF00664	ABC transporter transmembrane region
M478_1358	PF01163	RIO1 family
M478_1359	PF03795	YCII-related domain
M478_136	PF11187	Protein of unknown function (DUF2974)
M478_1360	PF06167	Glucose-regulated metallo-peptidase M90
M478_1363	PF01695	IstB-like ATP binding protein
M478_1365	PF00665	Integrase core domain
M478_1365	PF02796	Helix-turn-helix domain of resolvase
M478_1366	PF00356	Bacterial regulatory proteins, lacI family
M478_1366	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
M478_1367	PF00872	M478_1367
M478_1368	PF01306	LacY proton/sugar symporter
M478_1369	PF02065	Melibiase
M478_1369	PF16875	M478_1369
M478_1372	PF01648	4'-phosphopantetheinyl transferase superfamily
M478_1373	PF03480	Bacterial extracellular solute-binding protein, family 7
M478_1374	PF04290	M478_1374
M478_1375	PF06808	M478_1375
M478_1376	PF00072	Response regulator receiver domain
M478_1376	PF00196	Bacterial regulatory proteins, luxR family
M478_1378	PF09831	M478_1378
M478_1380	PF01522	Polysaccharide deacetylase
M478_1381	PF07690	Major Facilitator Superfamily
M478_1382	PF01554	MatE
M478_1383	PF00764	Arginosuccinate synthase
M478_1384	PF01070	FMN-dependent dehydrogenase
M478_1386	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
M478_1386	PF13378	Enolase C-terminal domain-like
M478_1387	PF01557	Fumarylacetoacetate (FAA) hydrolase family
M478_1388	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_1389	PF04134	M478_1389
M478_1390	PF07690	Major Facilitator Superfamily
M478_1391	PF00872	M478_1391
M478_1392	PF02369	Bacterial Ig-like domain (group 1)
M478_1392	PF09134	Invasin, domain 3
M478_1392	PF11924	Protein of unknown function (DUF3442)
M478_1393	PF04363	M478_1393
M478_1394	PF07993	Male sterility protein
M478_1395	PF00929	Exonuclease
M478_1395	PF08411	Exonuclease C-terminal
M478_1396	PF13520	Amino acid permease
M478_1398	PF00465	Iron-containing alcohol dehydrogenase
M478_1399	PF00005	ABC transporter
M478_140	PF00270	DEAD/DEAH box helicase
M478_140	PF00271	Helicase conserved C-terminal domain
M478_1400	PF00005	ABC transporter
M478_1401	PF02653	M478_1401
M478_1402	PF16695	M478_1402
M478_1403	PF01370	NAD dependent epimerase/dehydratase family
M478_1404	PF01634	ATP phosphoribosyltransferase
M478_1404	PF08029	HisG, C-terminal domain
M478_1405	PF00815	Histidinol dehydrogenase
M478_1406	PF00155	Aminotransferase class I and II
M478_1407	PF00475	Imidazoleglycerol-phosphate dehydratase
M478_1407	PF13242	HAD-hyrolase-like
M478_1408	PF00117	Glutamine amidotransferase class-I
M478_1409	PF00977	Histidine biosynthesis protein
M478_141	PF05175	Methyltransferase small domain
M478_1410	PF00977	Histidine biosynthesis protein
M478_1411	PF01502	Phosphoribosyl-AMP cyclohydrolase
M478_1411	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
M478_1412	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
M478_1412	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
M478_1413	PF00483	Nucleotidyl transferase
M478_1414	PF00483	Nucleotidyl transferase
M478_1417	PF00593	TonB dependent receptor
M478_1417	PF07715	TonB-dependent Receptor Plug Domain
M478_1418	PF01497	Periplasmic binding protein
M478_1419	PF01032	FecCD transport family
M478_142	PF00890	FAD binding domain
M478_142	PF02910	Fumarate reductase flavoprotein C-term
M478_1420	PF01032	FecCD transport family
M478_1421	PF00005	ABC transporter
M478_1422	PF04183	IucA / IucC family
M478_1422	PF06276	Ferric iron reductase FhuF-like transporter
M478_1423	PF13523	Acetyltransferase (GNAT) domain
M478_1424	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
M478_1425	PF00282	Pyridoxal-dependent decarboxylase conserved domain
M478_1426	PF06276	Ferric iron reductase FhuF-like transporter
M478_1426	PF11575	M478_1426
M478_1427	PF00571	CBS domain
M478_1427	PF03471	Transporter associated domain
M478_1427	PF03741	M478_1427
M478_1428	PF05170	M478_1428
M478_1428	PF13502	M478_1428
M478_1429	PF00692	dUTPase
M478_143	PF04542	Sigma-70 region 2
M478_143	PF08281	Sigma-70, region 4
M478_1430	PF00485	Phosphoribulokinase / Uridine kinase family
M478_1431	PF10609	ParA/MinD ATPase like
M478_1432	PF01588	Putative tRNA binding domain
M478_1432	PF09334	tRNA synthetases class I (M)
M478_1433	PF01797	Transposase IS200 like
M478_1435	PF13407	Periplasmic binding protein domain
M478_1436	PF08309	M478_1436
M478_1437	PF07690	Major Facilitator Superfamily
M478_1438	PF03788	M478_1438
M478_1439	PF04172	M478_1439
M478_144	PF03872	Anti sigma-E protein RseA, N-terminal domain
M478_144	PF03873	Anti sigma-E protein RseA, C-terminal domain
M478_1440	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
M478_1440	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
M478_1441	PF00390	Malic enzyme, N-terminal domain
M478_1441	PF03949	Malic enzyme, NAD binding domain
M478_1442	PF02698	DUF218 domain
M478_1443	PF02653	M478_1443
M478_1444	PF00005	ABC transporter
M478_1445	PF13407	Periplasmic binding protein domain
M478_1446	PF04235	M478_1446
M478_1447	PF01227	GTP cyclohydrolase I
M478_1448	PF06779	M478_1448
M478_1449	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_1449	PF03466	LysR substrate binding domain
M478_145	PF03888	MucB/RseB family
M478_145	PF17188	M478_145
M478_1450	PF00107	Zinc-binding dehydrogenase
M478_1450	PF08240	Alcohol dehydrogenase GroES-like domain
M478_1451	PF00756	Putative esterase
M478_1454	PF13437	HlyD family secretion protein
M478_1455	PF00005	ABC transporter
M478_1456	PF04055	Radical SAM superfamily
M478_1457	PF00994	Probable molybdopterin binding domain
M478_1457	PF03453	MoeA N-terminal region (domain I and II)
M478_1457	PF03454	MoeA C-terminal region (domain IV)
M478_1458	PF00899	ThiF family
M478_1459	PF00872	M478_1459
M478_146	PF04246	M478_146
M478_1460	PF16809	M478_1460
M478_1461	PF00005	ABC transporter
M478_1461	PF12848	ABC transporter
M478_1462	PF16809	M478_1462
M478_1463	PF06812	M478_1463
M478_1463	PF12486	M478_1463
M478_1464	PF04965	Gene 25-like lysozyme
M478_1465	PF12790	Type VI secretion lipoprotein
M478_1466	PF06996	M478_1466
M478_1467	PF05947	M478_1467
M478_1469	PF05488	PAAR motif
M478_1469	PF15607	M478_1469
M478_1470	PF06812	M478_1470
M478_1470	PF16989	M478_1470
M478_1471	PF06744	M478_1471
M478_1471	PF06761	M478_1471
M478_1474	PF01551	Peptidase family M23
M478_1476	PF10106	M478_1476
M478_148	PF00009	Elongation factor Tu GTP binding domain
M478_148	PF00679	Elongation factor G C-terminus
M478_148	PF03144	Elongation factor Tu domain 2
M478_148	PF06421	GTP-binding protein LepA C-terminus
M478_1480	PF05954	Phage late control gene D protein (GPD)
M478_1480	PF10106	M478_1480
M478_1480	PF13296	M478_1480
M478_1481	PF00004	ATPase family associated with various cellular activities (AAA)
M478_1481	PF07724	AAA domain (Cdc48 subfamily)
M478_1481	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_1482	PF05638	Protein of unknown function (DUF796)
M478_1483	PF00691	OmpA family
M478_1484	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
M478_1485	PF05936	M478_1485
M478_1486	PF05943	M478_1486
M478_1487	PF05591	M478_1487
M478_1489	PF00698	Acyl transferase domain
M478_149	PF00717	Peptidase S24-like
M478_149	PF10502	Signal peptidase, peptidase S26
M478_1490	PF00550	Phosphopantetheine attachment site
M478_1491	PF13924	M478_1491
M478_1492	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_1493	PF00378	Enoyl-CoA hydratase/isomerase family
M478_1494	PF00378	Enoyl-CoA hydratase/isomerase family
M478_1495	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
M478_1495	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
M478_1496	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_1497	PF00109	Beta-ketoacyl synthase, N-terminal domain
M478_1497	PF02801	Beta-ketoacyl synthase, C-terminal domain
M478_1498	PF07977	FabA-like domain
M478_150	PF00035	Double-stranded RNA binding motif
M478_150	PF14622	Ribonuclease-III-like
M478_1500	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_1501	PF01565	FAD binding domain
M478_1501	PF13480	Acetyltransferase (GNAT) domain
M478_1505	PF13610	M478_1505
M478_1507	PF04358	DsrC like protein
M478_1508	PF00708	Acylphosphatase
M478_1509	PF10672	S-adenosylmethionine-dependent methyltransferase
M478_151	PF01926	50S ribosome-binding GTPase
M478_151	PF07650	KH domain
M478_1510	PF08755	Hemimethylated DNA-binding protein YccV like
M478_1511	PF13380	CoA binding domain
M478_1512	PF09829	M478_1512
M478_1513	PF02142	MGS-like domain
M478_1514	PF00580	UvrD/REP helicase N-terminal domain
M478_1514	PF12462	M478_1514
M478_1514	PF13361	UvrD-like helicase C-terminal domain
M478_1515	PF03733	M478_1515
M478_1516	PF12805	M478_1516
M478_1516	PF13515	M478_1516
M478_1517	PF04993	TfoX N-terminal domain
M478_1517	PF04994	TfoX C-terminal domain
M478_1518	PF03846	Cell division inhibitor SulA
M478_1519	PF00691	OmpA family
M478_1519	PF01389	OmpA-like transmembrane domain
M478_152	PF02565	Recombination protein O C terminal
M478_152	PF11967	Recombination protein O N terminal
M478_1520	PF01797	Transposase IS200 like
M478_1521	PF06303	Organiser of macrodomain of Terminus of chromosome
M478_1521	PF17414	M478_1521
M478_1522	PF05362	Lon protease (S16) C-terminal proteolytic domain
M478_1522	PF13654	AAA domain
M478_1523	PF07977	FabA-like domain
M478_1525	PF00109	Beta-ketoacyl synthase, N-terminal domain
M478_1526	PF00665	Integrase core domain
M478_1526	PF02796	Helix-turn-helix domain of resolvase
M478_1527	PF01695	IstB-like ATP binding protein
M478_1528	PF00109	Beta-ketoacyl synthase, N-terminal domain
M478_1528	PF02801	Beta-ketoacyl synthase, C-terminal domain
M478_1529	PF01797	Transposase IS200 like
M478_153	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
M478_1530	PF03886	Protein of unknown function (DUF330)
M478_1531	PF02470	M478_1531
M478_1532	PF04403	M478_1532
M478_1533	PF00005	ABC transporter
M478_1533	PF12848	ABC transporter
M478_1533	PF16326	M478_1533
M478_1534	PF01170	Putative RNA methylase family UPF0020
M478_1534	PF02926	THUMP domain
M478_1534	PF10672	S-adenosylmethionine-dependent methyltransferase
M478_1535	PF00111	2Fe-2S iron-sulfur cluster binding domain
M478_1535	PF03473	MOSC domain
M478_1535	PF03476	MOSC N-terminal beta barrel domain
M478_1536	PF07126	M478_1536
M478_1537	PF01180	Dihydroorotate dehydrogenase
M478_1538	PF01433	Peptidase family M1
M478_1538	PF11940	Domain of unknown function (DUF3458)
M478_1538	PF17432	M478_1538
M478_1539	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
M478_154	PF01648	4'-phosphopantetheinyl transferase superfamily
M478_1540	PF00152	tRNA synthetases class II (D, K and N)
M478_1540	PF01336	OB-fold nucleic acid binding domain
M478_1541	PF00267	Gram-negative porin
M478_1542	PF00155	Aminotransferase class I and II
M478_1543	PF00753	Metallo-beta-lactamase superfamily
M478_1544	PF05951	M478_1544
M478_1545	PF01471	Putative peptidoglycan binding domain
M478_1545	PF03734	L,D-transpeptidase catalytic domain
M478_1546	PF01797	Transposase IS200 like
M478_1547	PF04310	MukB N-terminal
M478_1547	PF13558	Putative exonuclease SbcCD, C subunit
M478_1547	PF16330	M478_1547
M478_1548	PF04288	MukE-like family
M478_1549	PF03882	KicB killing factor
M478_1549	PF17192	M478_1549
M478_1549	PF17193	M478_1549
M478_155	PF01797	Transposase IS200 like
M478_1550	PF13847	Methyltransferase domain
M478_1551	PF03881	Fructosamine kinase
M478_1552	PF02348	Cytidylyltransferase
M478_1553	PF03966	Trm112p-like protein
M478_1554	PF00313	'Cold-shock' DNA-binding domain
M478_1555	PF07063	Domain of unknown function (DUF1338)
M478_1556	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
M478_1557	PF00005	ABC transporter
M478_1557	PF00664	ABC transporter transmembrane region
M478_1558	PF00753	Metallo-beta-lactamase superfamily
M478_1558	PF03772	M478_1558
M478_1558	PF13567	M478_1558
M478_1559	PF00216	Bacterial DNA-binding protein
M478_156	PF12838	4Fe-4S dicluster domain
M478_1561	PF00575	S1 RNA binding domain
M478_1562	PF02224	Cytidylate kinase
M478_1563	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
M478_1564	PF00266	Aminotransferase class-V
M478_1565	PF03895	YadA-like C-terminal region
M478_1566	PF03895	YadA-like C-terminal region
M478_1567	PF00710	Asparaginase
M478_1568	PF02624	YcaO-like family
M478_1569	PF01226	Formate/nitrite transporter
M478_157	PF01380	SIS domain
M478_157	PF01418	Helix-turn-helix domain, rpiR family
M478_1570	PF01228	Glycine radical
M478_1570	PF02901	Pyruvate formate lyase
M478_1571	PF01755	M478_1571
M478_1572	PF04055	Radical SAM superfamily
M478_1572	PF13353	4Fe-4S single cluster domain
M478_1573	PF07690	Major Facilitator Superfamily
M478_1574	PF00665	Integrase core domain
M478_1574	PF02796	Helix-turn-helix domain of resolvase
M478_1575	PF01695	IstB-like ATP binding protein
M478_1576	PF07690	Major Facilitator Superfamily
M478_1577	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
M478_1577	PF02403	Seryl-tRNA synthetase N-terminal domain
M478_1578	PF00004	ATPase family associated with various cellular activities (AAA)
M478_1578	PF12002	MgsA AAA+ ATPase C terminal
M478_1578	PF16193	M478_1578
M478_158	PF01380	SIS domain
M478_1580	PF03548	Outer membrane lipoprotein carrier protein LolA
M478_1581	PF01580	FtsK/SpoIIIE family
M478_1581	PF09397	Ftsk gamma domain
M478_1581	PF13491	M478_1581
M478_1582	PF01037	AsnC family
M478_1582	PF13412	Winged helix-turn-helix DNA-binding
M478_1583	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_1584	PF00005	ABC transporter
M478_1584	PF00664	ABC transporter transmembrane region
M478_1585	PF00005	ABC transporter
M478_1585	PF00664	ABC transporter transmembrane region
M478_1586	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
M478_1587	PF01176	Translation initiation factor 1A / IF-1
M478_1588	PF01797	Transposase IS200 like
M478_1589	PF00004	ATPase family associated with various cellular activities (AAA)
M478_1589	PF02861	Clp amino terminal domain
M478_1589	PF07724	AAA domain (Cdc48 subfamily)
M478_1589	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_159	PF12710	haloacid dehalogenase-like hydrolase
M478_1590	PF02617	ATP-dependent Clp protease adaptor protein ClpS
M478_1591	PF00313	'Cold-shock' DNA-binding domain
M478_1592	PF00005	ABC transporter
M478_1592	PF02687	M478_1592
M478_1592	PF12704	MacB-like periplasmic core domain
M478_1593	PF16576	M478_1593
M478_1594	PF04393	M478_1594
M478_1595	PF11398	Protein of unknown function (DUF2813)
M478_1596	PF03956	M478_1596
M478_1597	PF03063	Prismane/CO dehydrogenase family
M478_1598	PF00111	2Fe-2S iron-sulfur cluster binding domain
M478_1598	PF00175	Oxidoreductase NAD-binding domain
M478_1598	PF00970	Oxidoreductase FAD-binding domain
M478_1599	PF00205	Thiamine pyrophosphate enzyme, central domain
M478_1599	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M478_1599	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
M478_16	PF00196	Bacterial regulatory proteins, luxR family
M478_160	PF14437	M478_160
M478_1600	PF01212	Beta-eliminating lyase
M478_1601	PF11066	M478_1601
M478_1601	PF13460	NADH(P)-binding
M478_1602	PF01370	NAD dependent epimerase/dehydratase family
M478_1603	PF12883	Protein of unknown function (DUF3828)
M478_1604	PF01817	Chorismate mutase type II
M478_1605	PF00005	ABC transporter
M478_1606	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_1607	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1608	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1609	PF00892	EamA-like transporter family
M478_161	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_161	PF01464	Transglycosylase SLT domain
M478_1610	PF10100	M478_1610
M478_1611	PF03059	Nicotianamine synthase protein
M478_1612	PF00005	ABC transporter
M478_1613	PF01032	FecCD transport family
M478_1615	PF01497	Periplasmic binding protein
M478_1616	PF01145	SPFH domain / Band 7 family
M478_1618	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_1619	PF05958	tRNA (Uracil-5-)-methyltransferase
M478_162	PF02769	AIR synthase related protein, C-terminal domain
M478_162	PF13507	CobB/CobQ-like glutamine amidotransferase domain
M478_1620	PF10767	M478_1620
M478_1621	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1622	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1623	PF00005	ABC transporter
M478_1623	PF08402	TOBE domain
M478_1624	PF13416	Bacterial extracellular solute-binding protein
M478_1625	PF10722	Putative bacterial sensory transduction regulator
M478_1626	PF07214	M478_1626
M478_1627	PF00462	Glutaredoxin
M478_1628	PF02080	TrkA-C domain
M478_1628	PF06826	M478_1628
M478_1629	PF01569	PAP2 superfamily
M478_1630	PF01569	PAP2 superfamily
M478_1631	PF01791	DeoC/LacD family aldolase
M478_1632	PF00455	M478_1632
M478_1632	PF08220	DeoR-like helix-turn-helix domain
M478_1633	PF03222	Tryptophan/tyrosine permease family
M478_1634	PF00768	D-alanyl-D-alanine carboxypeptidase
M478_1634	PF07943	Penicillin-binding protein 5, C-terminal domain
M478_1635	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1636	PF00005	ABC transporter
M478_1636	PF09383	NIL domain
M478_1637	PF03180	NLPA lipoprotein
M478_1638	PF03171	2OG-Fe(II) oxygenase superfamily
M478_1638	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
M478_1640	PF12710	haloacid dehalogenase-like hydrolase
M478_1641	PF00043	Glutathione S-transferase, C-terminal domain
M478_1641	PF13417	Glutathione S-transferase, N-terminal domain
M478_1642	PF00593	TonB dependent receptor
M478_1642	PF07715	TonB-dependent Receptor Plug Domain
M478_1643	PF00005	ABC transporter
M478_1644	PF01032	FecCD transport family
M478_1645	PF01497	Periplasmic binding protein
M478_1646	PF00324	Amino acid permease
M478_1648	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_1648	PF03466	LysR substrate binding domain
M478_1649	PF03601	M478_1649
M478_1650	PF01261	Xylose isomerase-like TIM barrel
M478_1651	PF00577	Outer membrane usher protein
M478_1651	PF13953	PapC C-terminal domain
M478_1651	PF13954	PapC N-terminal domain
M478_1652	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_1652	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_1654	PF17550	M478_1654
M478_1655	PF00486	Transcriptional regulatory protein, C terminal
M478_1656	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
M478_1656	PF02378	Phosphotransferase system, EIIC
M478_1657	PF00294	pfkB family carbohydrate kinase
M478_1658	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
M478_1658	PF00381	PTS HPr component phosphorylation site
M478_1659	PF00293	NUDIX domain
M478_166	PF01797	Transposase IS200 like
M478_1660	PF02653	M478_1660
M478_1661	PF00005	ABC transporter
M478_1662	PF13407	Periplasmic binding protein domain
M478_1663	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
M478_1664	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_1664	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_1665	PF00171	Aldehyde dehydrogenase family
M478_1666	PF01557	Fumarylacetoacetate (FAA) hydrolase family
M478_1667	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
M478_1667	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
M478_1668	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_1669	PF03692	M478_1669
M478_167	PF00512	His Kinase A (phospho-acceptor) domain
M478_167	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_1670	PF03222	Tryptophan/tyrosine permease family
M478_1671	PF01132	Elongation factor P (EF-P) OB domain
M478_1671	PF08207	Elongation factor P (EF-P) KOW-like domain
M478_1671	PF09285	Elongation factor P, C-terminal
M478_1672	PF03786	D-mannonate dehydratase (UxuA)
M478_1673	PF01232	Mannitol dehydrogenase Rossmann domain
M478_1673	PF08125	Mannitol dehydrogenase C-terminal domain
M478_1674	PF00392	Bacterial regulatory proteins, gntR family
M478_1674	PF07729	FCD domain
M478_1676	PF02492	CobW/HypB/UreG, nucleotide-binding domain
M478_1676	PF07683	Cobalamin synthesis protein cobW C-terminal domain
M478_1677	PF01569	PAP2 superfamily
M478_1678	PF00877	NlpC/P60 family
M478_168	PF13942	M478_168
M478_1680	PF00563	EAL domain
M478_1680	PF12792	M478_1680
M478_1681	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_1682	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1683	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1683	PF12911	M478_1683
M478_1684	PF00005	ABC transporter
M478_1684	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
M478_1685	PF13989	M478_1685
M478_1686	PF07690	Major Facilitator Superfamily
M478_1687	PF00849	RNA pseudouridylate synthase
M478_1687	PF01479	S4 domain
M478_1688	PF00271	Helicase conserved C-terminal domain
M478_1688	PF04851	Type III restriction enzyme, res subunit
M478_1689	PF01386	Ribosomal L25p family
M478_169	PF00072	Response regulator receiver domain
M478_169	PF00158	Sigma-54 interaction domain
M478_1690	PF01797	Transposase IS200 like
M478_1691	PF04245	M478_1691
M478_1692	PF07208	Protein of unknown function (DUF1414)
M478_1693	PF00884	Sulfatase
M478_1693	PF11893	M478_1693
M478_1696	PF12639	DNase/tRNase domain of colicin-like bacteriocin
M478_17	PF00313	'Cold-shock' DNA-binding domain
M478_170	PF00795	Carbon-nitrogen hydrolase
M478_170	PF02540	NAD synthase
M478_1700	PF00232	Glycosyl hydrolase family 1
M478_1702	PF01380	SIS domain
M478_1702	PF01418	Helix-turn-helix domain, rpiR family
M478_1703	PF07484	Phage Tail Collar Domain
M478_1704	PF10076	M478_1704
M478_1705	PF10076	M478_1705
M478_1706	PF04865	M478_1706
M478_1707	PF07409	M478_1707
M478_1708	PF06890	Bacteriophage Mu Gp45 protein
M478_1709	PF05954	Phage late control gene D protein (GPD)
M478_171	PF00543	Nitrogen regulatory protein P-II
M478_1710	PF07157	M478_1710
M478_1712	PF10109	M478_1712
M478_1713	PF10618	M478_1713
M478_1714	PF04984	Phage tail sheath protein
M478_1714	PF17482	M478_1714
M478_1715	PF10948	M478_1715
M478_1718	PF01261	Xylose isomerase-like TIM barrel
M478_1719	PF00455	M478_1719
M478_1719	PF08220	DeoR-like helix-turn-helix domain
M478_172	PF14503	YhfZ C-terminal domain
M478_1720	PF00596	Class II Aldolase and Adducin N-terminal domain
M478_1721	PF07005	Protein of unknown function, DUF1537
M478_1721	PF17042	M478_1721
M478_1722	PF06530	M478_1722
M478_1723	PF00717	Peptidase S24-like
M478_1723	PF01381	Helix-turn-helix
M478_1724	PF06183	DinI-like family
M478_1725	PF01278	Omptin family
M478_1726	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_1726	PF00672	HAMP domain
M478_1726	PF02743	Cache domain
M478_1727	PF12706	Beta-lactamase superfamily domain
M478_1728	PF13347	MFS/sugar transport protein
M478_1729	PF00144	Beta-lactamase
M478_173	PF14503	YhfZ C-terminal domain
M478_1732	PF01797	Transposase IS200 like
M478_1733	PF00267	Gram-negative porin
M478_1735	PF07690	Major Facilitator Superfamily
M478_1736	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_1737	PF01627	Hpt domain
M478_1737	PF16359	M478_1737
M478_1738	PF00072	Response regulator receiver domain
M478_1738	PF00196	Bacterial regulatory proteins, luxR family
M478_1739	PF00072	Response regulator receiver domain
M478_1739	PF00512	His Kinase A (phospho-acceptor) domain
M478_1739	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_1739	PF09456	RcsC Alpha-Beta-Loop (ABL)
M478_174	PF00665	Integrase core domain
M478_174	PF02796	Helix-turn-helix domain of resolvase
M478_1740	PF00521	DNA gyrase/topoisomerase IV, subunit A
M478_1740	PF03989	DNA gyrase C-terminal domain, beta-propeller
M478_1741	PF13489	Methyltransferase domain
M478_1742	PF00317	Ribonucleotide reductase, all-alpha domain
M478_1742	PF02867	Ribonucleotide reductase, barrel domain
M478_1742	PF03477	ATP cone domain
M478_1743	PF00268	Ribonucleotide reductase, small chain
M478_1744	PF00111	2Fe-2S iron-sulfur cluster binding domain
M478_1745	PF03974	Ecotin
M478_1746	PF00994	Probable molybdopterin binding domain
M478_1747	PF03222	Tryptophan/tyrosine permease family
M478_1748	PF07437	M478_1748
M478_1749	PF00199	Catalase
M478_1749	PF06628	Catalase-related immune-responsive
M478_175	PF01695	IstB-like ATP binding protein
M478_1750	PF06733	DEAD_2
M478_1750	PF13307	Helicase C-terminal domain
M478_1751	PF00267	Gram-negative porin
M478_1752	PF00892	EamA-like transporter family
M478_1754	PF01276	Orn/Lys/Arg decarboxylase, major domain
M478_1754	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
M478_1754	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
M478_1755	PF13520	Amino acid permease
M478_1756	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1757	PF00005	ABC transporter
M478_1758	PF00528	Binding-protein-dependent transport system inner membrane component
M478_176	PF00042	Globin
M478_176	PF00175	Oxidoreductase NAD-binding domain
M478_176	PF00970	Oxidoreductase FAD-binding domain
M478_1761	PF00581	Rhodanese-like domain
M478_1762	PF00282	Pyridoxal-dependent decarboxylase conserved domain
M478_1763	PF13640	2OG-Fe(II) oxygenase superfamily
M478_1764	PF00005	ABC transporter
M478_1765	PF00005	ABC transporter
M478_1765	PF12399	Branched-chain amino acid ATP-binding cassette transporter
M478_1766	PF02653	M478_1766
M478_1767	PF02653	M478_1767
M478_1767	PF13646	HEAT repeats
M478_1768	PF13433	Periplasmic binding protein domain
M478_1769	PF07308	M478_1769
M478_177	PF00464	Serine hydroxymethyltransferase
M478_1770	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1771	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1772	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
M478_1773	PF00005	ABC transporter
M478_1774	PF04226	M478_1774
M478_1775	PF05076	Suppressor of fused protein (SUFU)
M478_1776	PF01844	HNH endonuclease
M478_1777	PF01928	CYTH domain
M478_1778	PF01565	FAD binding domain
M478_1778	PF09330	D-lactate dehydrogenase, membrane binding
M478_1779	PF00768	D-alanyl-D-alanine carboxypeptidase
M478_178	PF13505	Outer membrane protein beta-barrel domain
M478_1781	PF01207	Dihydrouridine synthase (Dus)
M478_1783	PF01797	Transposase IS200 like
M478_1784	PF01027	Inhibitor of apoptosis-promoting Bax1
M478_1785	PF02391	MoaE protein
M478_1786	PF02597	ThiS family
M478_1787	PF01967	MoaC family
M478_1788	PF04055	Radical SAM superfamily
M478_1788	PF06463	Molybdenum Cofactor Synthesis C
M478_1788	PF13353	4Fe-4S single cluster domain
M478_179	PF00874	PRD domain
M478_1790	PF01933	Uncharacterised protein family UPF0052
M478_1791	PF09905	Uncharacterized conserved protein (DUF2132)
M478_1792	PF00271	Helicase conserved C-terminal domain
M478_1792	PF02151	UvrB/uvrC motif
M478_1792	PF04851	Type III restriction enzyme, res subunit
M478_1792	PF12344	Ultra-violet resistance protein B
M478_1793	PF00005	ABC transporter
M478_1794	PF13500	AAA domain
M478_1795	PF08241	Methyltransferase domain
M478_1796	PF00155	Aminotransferase class I and II
M478_1797	PF04055	Radical SAM superfamily
M478_1797	PF06968	Biotin and Thiamin Synthesis associated domain
M478_1798	PF00202	Aminotransferase class-III
M478_1799	PF10282	Lactonase, 7-bladed beta-propeller
M478_18	PF00313	'Cold-shock' DNA-binding domain
M478_180	PF12832	MFS_1 like family
M478_1800	PF08282	haloacid dehalogenase-like hydrolase
M478_1801	PF00005	ABC transporter
M478_1801	PF03459	TOBE domain
M478_1802	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1803	PF13531	Bacterial extracellular solute-binding protein
M478_1804	PF10766	Protein of unknown function (DUF2592)
M478_1805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_1805	PF03459	TOBE domain
M478_1806	PF00005	ABC transporter
M478_1808	PF02517	CAAX protease self-immunity
M478_1809	PF16363	M478_1809
M478_181	PF06226	M478_181
M478_1810	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
M478_1810	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
M478_1811	PF00288	GHMP kinases N terminal domain
M478_1811	PF08544	GHMP kinases C terminal
M478_1811	PF10509	Galactokinase galactose-binding signature
M478_1813	PF01263	Aldose 1-epimerase
M478_1814	PF07769	M478_1814
M478_1815	PF00300	Histidine phosphatase superfamily (branch 1)
M478_1816	PF00793	DAHP synthetase I family
M478_1818	PF01545	Cation efflux family
M478_1819	PF04973	M478_1819
M478_182	PF03824	M478_182
M478_1820	PF02445	Quinolinate synthetase A protein
M478_1824	PF13174	Tetratricopeptide repeat
M478_1824	PF13432	Tetratricopeptide repeat
M478_1824	PF16331	M478_1824
M478_1825	PF00691	OmpA family
M478_1826	PF04052	TolB amino-terminal domain
M478_1826	PF07676	WD40-like Beta Propeller Repeat
M478_1827	PF06519	TolA C-terminal
M478_1828	PF02472	Biopolymer transport protein ExbD/TolR
M478_1829	PF01618	M478_1829
M478_183	PF00459	Inositol monophosphatase family
M478_1830	PF03061	Thioesterase superfamily
M478_1831	PF09600	M478_1831
M478_1832	PF08173	M478_1832
M478_1833	PF02322	M478_1833
M478_1834	PF01654	M478_1834
M478_1835	PF00549	CoA-ligase
M478_1835	PF02629	CoA binding domain
M478_1836	PF00549	CoA-ligase
M478_1836	PF08442	ATP-grasp domain
M478_1837	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
M478_1837	PF00364	Biotin-requiring enzyme
M478_1837	PF02817	e3 binding domain
M478_1838	PF00676	Dehydrogenase E1 component
M478_1838	PF02779	Transketolase, pyrimidine binding domain
M478_1838	PF16078	M478_1838
M478_1838	PF16870	M478_1838
M478_1839	PF13085	2Fe-2S iron-sulfur cluster binding domain
M478_1839	PF13534	4Fe-4S dicluster domain
M478_184	PF00588	SpoU rRNA Methylase family
M478_1840	PF00890	FAD binding domain
M478_1840	PF02910	Fumarate reductase flavoprotein C-term
M478_1842	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
M478_1843	PF00285	Citrate synthase
M478_1844	PF01025	GrpE
M478_1845	PF01513	ATP-NAD kinase
M478_1846	PF02463	RecF/RecN/SMC N terminal domain
M478_1847	PF04355	SmpA / OmlA family
M478_1848	PF03658	RnfH family Ubiquitin
M478_1849	PF03364	Polyketide cyclase / dehydrase and lipid transport
M478_185	PF02082	Transcriptional regulator
M478_1850	PF01668	SmpB protein
M478_1851	PF01797	Transposase IS200 like
M478_1852	PF00589	Phage integrase family
M478_1852	PF13356	Domain of unknown function (DUF4102)
M478_1853	PF14130	M478_1853
M478_1855	PF12834	M478_1855
M478_1855	PF12835	Integrase
M478_1856	PF05930	Prophage CP4-57 regulatory protein (AlpA)
M478_1857	PF10554	M478_1857
M478_1858	PF08273	Zinc-binding domain of primase-helicase
M478_1858	PF13362	Toprim domain
M478_1859	PF13481	AAA domain
M478_186	PF00266	Aminotransferase class-V
M478_1862	PF05973	M478_1862
M478_1864	PF00665	Integrase core domain
M478_1864	PF02796	Helix-turn-helix domain of resolvase
M478_1865	PF01695	IstB-like ATP binding protein
M478_1868	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
M478_187	PF01592	NifU-like N terminal domain
M478_1870	PF00929	Exonuclease
M478_1871	PF00075	RNase H
M478_1872	PF08241	Methyltransferase domain
M478_1873	PF00753	Metallo-beta-lactamase superfamily
M478_1873	PF16123	M478_1873
M478_1874	PF01464	Transglycosylase SLT domain
M478_1874	PF01476	LysM domain
M478_1875	PF03372	Endonuclease/Exonuclease/phosphatase family
M478_1877	PF00248	Aldo/keto reductase family
M478_188	PF01521	Iron-sulphur cluster biosynthesis
M478_1883	PF13242	HAD-hyrolase-like
M478_1884	PF00005	ABC transporter
M478_1884	PF09383	NIL domain
M478_1885	PF00528	Binding-protein-dependent transport system inner membrane component
M478_1886	PF03180	NLPA lipoprotein
M478_1887	PF16358	M478_1887
M478_1888	PF01980	Uncharacterised protein family UPF0066
M478_1889	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
M478_1889	PF03129	Anticodon binding domain
M478_1889	PF04073	Aminoacyl-tRNA editing domain
M478_189	PF00226	DnaJ domain
M478_189	PF07743	HSCB C-terminal oligomerisation domain
M478_1890	PF04170	NlpE N-terminal domain
M478_1890	PF17185	M478_1890
M478_1891	PF00472	RF-1 domain
M478_1892	PF07152	YaeQ protein
M478_1893	PF06786	M478_1893
M478_1894	PF07073	Modulator of Rho-dependent transcription termination (ROF)
M478_1895	PF00034	Cytochrome c
M478_1896	PF01171	PP-loop family
M478_1896	PF09179	TilS substrate binding domain
M478_1896	PF11734	TilS substrate C-terminal domain
M478_1897	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
M478_1898	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
M478_1899	PF01336	OB-fold nucleic acid binding domain
M478_1899	PF02811	PHP domain
M478_1899	PF07733	Bacterial DNA polymerase III alpha subunit
M478_1899	PF14579	Helix-hairpin-helix motif
M478_19	PF02537	M478_19
M478_190	PF00012	Hsp70 protein
M478_1900	PF01351	Ribonuclease HII
M478_1901	PF02684	M478_1901
M478_1902	PF00132	Bacterial transferase hexapeptide (six repeats)
M478_1902	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
M478_1903	PF07977	FabA-like domain
M478_1904	PF00132	Bacterial transferase hexapeptide (six repeats)
M478_1904	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
M478_1905	PF03938	Outer membrane protein (OmpH-like)
M478_1906	PF01103	Surface antigen
M478_1906	PF07244	Surface antigen variable number repeat
M478_1907	PF00595	PDZ domain (Also known as DHR or GLGF)
M478_1907	PF02163	Peptidase family M50
M478_1908	PF01148	Cytidylyltransferase family
M478_1909	PF01255	Putative undecaprenyl diphosphate synthase
M478_191	PF00111	2Fe-2S iron-sulfur cluster binding domain
M478_1910	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
M478_1910	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
M478_1910	PF13288	DXP reductoisomerase C-terminal domain
M478_1911	PF01765	Ribosome recycling factor
M478_1912	PF00696	Amino acid kinase family
M478_1913	PF00889	Elongation factor TS
M478_1914	PF00318	Ribosomal protein S2
M478_1915	PF00557	Metallopeptidase family M24
M478_1916	PF01842	ACT domain
M478_1916	PF01909	Nucleotidyltransferase domain
M478_1916	PF01966	HD domain
M478_1916	PF08335	GlnD PII-uridylyltransferase
M478_1917	PF00132	Bacterial transferase hexapeptide (six repeats)
M478_1917	PF14602	Hexapeptide repeat of succinyl-transferase
M478_1917	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
M478_1918	PF11944	M478_1918
M478_1919	PF00258	Flavodoxin
M478_192	PF04384	Iron-sulphur cluster assembly
M478_1920	PF00849	RNA pseudouridylate synthase
M478_1921	PF04287	tRNA pseudouridine synthase C
M478_1922	PF01797	Transposase IS200 like
M478_1923	PF07348	Syd protein (SUKH-2)
M478_1924	PF14489	QueF-like protein
M478_1924	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
M478_1925	PF03641	Possible lysine decarboxylase
M478_1925	PF11892	Domain of unknown function (DUF3412)
M478_1925	PF14793	Domain of unknown function (DUF4478)
M478_1926	PF00665	Integrase core domain
M478_1926	PF02796	Helix-turn-helix domain of resolvase
M478_1928	PF01695	IstB-like ATP binding protein
M478_1929	PF01367	5'-3' exonuclease, C-terminal SAM fold
M478_1929	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
M478_193	PF00883	Cytosol aminopeptidase family, catalytic domain
M478_193	PF12404	M478_193
M478_1930	PF01728	FtsJ-like methyltransferase
M478_1931	PF04241	M478_1931
M478_1932	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_1932	PF03466	LysR substrate binding domain
M478_1933	PF06004	Bacterial protein of unknown function (DUF903)
M478_1934	PF00266	Aminotransferase class-V
M478_1935	PF02657	Fe-S metabolism associated domain
M478_1936	PF00899	ThiF family
M478_1937	PF03562	MltA specific insert domain
M478_1937	PF06725	3D domain
M478_194	PF07179	M478_194
M478_194	PF14581	M478_194
M478_1940	PF01520	N-acetylmuramoyl-L-alanine amidase
M478_1940	PF11741	AMIN domain
M478_1941	PF00583	Acetyltransferase (GNAT) family
M478_1941	PF00696	Amino acid kinase family
M478_1942	PF13538	UvrD-like helicase C-terminal domain
M478_1942	PF13604	AAA domain
M478_1943	PF00580	UvrD/REP helicase N-terminal domain
M478_1943	PF13361	UvrD-like helicase C-terminal domain
M478_1944	PF00675	Insulinase (Peptidase family M16)
M478_1944	PF05193	Peptidase M16 inactive domain
M478_1944	PF16187	M478_1944
M478_1945	PF04257	Exodeoxyribonuclease V, gamma subunit
M478_1946	PF07963	Prokaryotic N-terminal methylation motif
M478_1946	PF12528	M478_1946
M478_1947	PF10713	M478_1947
M478_195	PF03797	Autotransporter beta-domain
M478_1951	PF00303	Thymidylate synthase
M478_1952	PF01790	M478_1952
M478_1953	PF00391	PEP-utilising enzyme, mobile domain
M478_1953	PF01590	GAF domain
M478_1953	PF02896	PEP-utilising enzyme, TIM barrel domain
M478_1953	PF05524	PEP-utilising enzyme, N-terminal
M478_1954	PF00293	NUDIX domain
M478_1955	PF02976	DNA mismatch repair enzyme MutH
M478_1956	PF00248	Aldo/keto reductase family
M478_1959	PF07690	Major Facilitator Superfamily
M478_196	PF03212	Pertactin
M478_196	PF03797	Autotransporter beta-domain
M478_1960	PF00501	AMP-binding enzyme
M478_1960	PF01553	Acyltransferase
M478_1960	PF13193	AMP-binding enzyme C-terminal domain
M478_1961	PF00384	Molybdopterin oxidoreductase
M478_1961	PF01568	Molydopterin dinucleotide binding domain
M478_1962	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
M478_1962	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
M478_1963	PF00356	Bacterial regulatory proteins, lacI family
M478_1963	PF13377	Periplasmic binding protein-like domain
M478_1964	PF07690	Major Facilitator Superfamily
M478_1965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_1965	PF03466	LysR substrate binding domain
M478_1966	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_1966	PF03466	LysR substrate binding domain
M478_1967	PF00753	Metallo-beta-lactamase superfamily
M478_1968	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_1968	PF02203	Tar ligand binding domain homologue
M478_1969	PF01323	DSBA-like thioredoxin domain
M478_197	PF03212	Pertactin
M478_197	PF03797	Autotransporter beta-domain
M478_1971	PF00486	Transcriptional regulatory protein, C terminal
M478_1972	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
M478_1973	PF01478	Type IV leader peptidase family
M478_1973	PF06750	M478_1973
M478_1975	PF05134	Type II secretion system (T2SS), protein L
M478_1975	PF12693	GspL periplasmic domain
M478_1976	PF03934	Type II secretion system (T2SS), protein K
M478_1977	PF07963	Prokaryotic N-terminal methylation motif
M478_1977	PF11612	Type II secretion system (T2SS), protein J
M478_1978	PF02501	Type II secretion system (T2SS), protein I
M478_1979	PF07963	Prokaryotic N-terminal methylation motif
M478_198	PF00030	Beta/Gamma crystallin
M478_198	PF08964	Beta/Gamma crystallin
M478_198	PF09101	Exotoxin A binding
M478_1980	PF07963	Prokaryotic N-terminal methylation motif
M478_1980	PF08334	Type II secretion system (T2SS), protein G
M478_1981	PF00482	Type II secretion system (T2SS), protein F
M478_1983	PF00437	Type II/IV secretion system protein
M478_1984	PF00263	M478_1984
M478_1984	PF03958	Bacterial type II/III secretion system short domain
M478_1985	PF11356	Type IV pilus biogenesis
M478_1987	PF00484	Carbonic anhydrase
M478_1989	PF16946	M478_1989
M478_199	PF00334	Nucleoside diphosphate kinase
M478_1990	PF03797	Autotransporter beta-domain
M478_1991	PF02278	Polysaccharide lyase family 8, super-sandwich domain
M478_1991	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
M478_1991	PF09092	Lyase, N terminal
M478_1991	PF09093	Lyase, catalytic
M478_1992	PF01695	IstB-like ATP binding protein
M478_1993	PF00665	Integrase core domain
M478_1993	PF02796	Helix-turn-helix domain of resolvase
M478_1994	PF00109	Beta-ketoacyl synthase, N-terminal domain
M478_1994	PF00501	AMP-binding enzyme
M478_1994	PF00550	Phosphopantetheine attachment site
M478_1994	PF02801	Beta-ketoacyl synthase, C-terminal domain
M478_1995	PF00593	TonB dependent receptor
M478_1995	PF07715	TonB-dependent Receptor Plug Domain
M478_1996	PF01546	Peptidase family M20/M25/M40
M478_1996	PF07687	Peptidase dimerisation domain
M478_1997	PF03806	M478_1997
M478_1998	PF12468	Type III secretion system leucine rich repeat protein
M478_1998	PF14496	C-terminal novel E3 ligase, LRR-interacting
M478_1999	PF12468	Type III secretion system leucine rich repeat protein
M478_2	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
M478_20	PF02416	mttA/Hcf106 family
M478_200	PF04055	Radical SAM superfamily
M478_2000	PF12468	Type III secretion system leucine rich repeat protein
M478_2000	PF14496	C-terminal novel E3 ligase, LRR-interacting
M478_2001	PF13018	M478_2001
M478_2003	PF07906	M478_2003
M478_2004	PF00873	AcrB/AcrD/AcrF family
M478_2005	PF16576	M478_2005
M478_2007	PF00563	EAL domain
M478_2007	PF00989	PAS fold
M478_2007	PF00990	GGDEF domain
M478_2007	PF05228	M478_2007
M478_2008	PF00665	Integrase core domain
M478_2008	PF13276	M478_2008
M478_2009	PF13518	Helix-turn-helix domain
M478_201	PF13181	Tetratricopeptide repeat
M478_201	PF13431	Tetratricopeptide repeat
M478_2010	PF13347	MFS/sugar transport protein
M478_2011	PF00593	TonB dependent receptor
M478_2011	PF07715	TonB-dependent Receptor Plug Domain
M478_2012	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
M478_2013	PF04183	IucA / IucC family
M478_2013	PF06276	Ferric iron reductase FhuF-like transporter
M478_2014	PF13523	Acetyltransferase (GNAT) domain
M478_2015	PF04183	IucA / IucC family
M478_2015	PF06276	Ferric iron reductase FhuF-like transporter
M478_2016	PF04183	IucA / IucC family
M478_2017	PF07690	Major Facilitator Superfamily
M478_2018	PF00775	Dioxygenase
M478_2019	PF10503	Esterase PHB depolymerase
M478_202	PF13413	Helix-turn-helix domain
M478_202	PF13464	M478_202
M478_2020	PF00765	Autoinducer synthetase
M478_2021	PF00196	Bacterial regulatory proteins, luxR family
M478_2021	PF03472	Autoinducer binding domain
M478_2023	PF02517	CAAX protease self-immunity
M478_2025	PF03811	M478_2025
M478_2025	PF12759	M478_2025
M478_2028	PF05591	M478_2028
M478_2029	PF05943	M478_2029
M478_203	PF04551	GcpE protein
M478_2030	PF05936	M478_2030
M478_2031	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
M478_2032	PF00691	OmpA family
M478_2033	PF05638	Protein of unknown function (DUF796)
M478_2034	PF00004	ATPase family associated with various cellular activities (AAA)
M478_2034	PF07724	AAA domain (Cdc48 subfamily)
M478_2034	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_2035	PF05954	Phage late control gene D protein (GPD)
M478_2035	PF10106	M478_2035
M478_2035	PF13296	M478_2035
M478_2037	PF03811	M478_2037
M478_2037	PF12759	M478_2037
M478_2038	PF03400	M478_2038
M478_2039	PF10106	M478_2039
M478_204	PF03129	Anticodon binding domain
M478_204	PF13393	Histidyl-tRNA synthetase
M478_2040	PF01551	Peptidase family M23
M478_2042	PF03811	M478_2042
M478_2042	PF12759	M478_2042
M478_2043	PF03400	M478_2043
M478_2044	PF10106	M478_2044
M478_2045	PF00589	Phage integrase family
M478_2047	PF01276	Orn/Lys/Arg decarboxylase, major domain
M478_2047	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
M478_2047	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
M478_2048	PF13407	Periplasmic binding protein domain
M478_2049	PF00005	ABC transporter
M478_205	PF09976	Tetratricopeptide repeat
M478_2050	PF02653	M478_2050
M478_2051	PF00593	TonB dependent receptor
M478_2051	PF07715	TonB-dependent Receptor Plug Domain
M478_2052	PF01497	Periplasmic binding protein
M478_2053	PF01464	Transglycosylase SLT domain
M478_2053	PF11873	Domain of unknown function (DUF3393)
M478_2054	PF04362	Bacterial Fe(2+) trafficking
M478_2055	PF00633	Helix-hairpin-helix motif
M478_2055	PF00730	HhH-GPD superfamily base excision DNA repair protein
M478_2055	PF10576	Iron-sulfur binding domain of endonuclease III
M478_2055	PF14815	NUDIX domain
M478_2056	PF02390	Putative methyltransferase
M478_2057	PF04320	M478_2057
M478_2058	PF04960	Glutaminase
M478_2059	PF11101	M478_2059
M478_206	PF13360	PQQ-like domain
M478_2060	PF11101	M478_2060
M478_2061	PF11713	Peptidase C80 family
M478_2062	PF04055	Radical SAM superfamily
M478_2062	PF06969	HemN C-terminal domain
M478_2063	PF01725	Ham1 family
M478_2064	PF02594	Uncharacterised ACR, YggU family COG1872
M478_2065	PF02325	M478_2065
M478_2066	PF03807	NADP oxidoreductase coenzyme F420-dependent
M478_2066	PF14748	Pyrroline-5-carboxylate reductase dimerisation
M478_2067	PF01168	Alanine racemase, N-terminal domain
M478_2068	PF00437	Type II/IV secretion system protein
M478_2069	PF04371	Porphyromonas-type peptidyl-arginine deiminase
M478_207	PF01926	50S ribosome-binding GTPase
M478_207	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
M478_2070	PF00795	Carbon-nitrogen hydrolase
M478_2071	PF03652	Uncharacterised protein family (UPF0081)
M478_2072	PF02622	Uncharacterized ACR, COG1678
M478_2073	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
M478_2073	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
M478_2074	PF04452	RNA methyltransferase
M478_2075	PF04231	Endonuclease I
M478_2076	PF10263	M478_2076
M478_2076	PF17283	M478_2076
M478_2077	PF00438	S-adenosylmethionine synthetase, N-terminal domain
M478_2077	PF02772	S-adenosylmethionine synthetase, central domain
M478_2077	PF02773	S-adenosylmethionine synthetase, C-terminal domain
M478_2079	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
M478_208	PF03547	M478_208
M478_2080	PF00355	Rieske [2Fe-2S] domain
M478_2081	PF01435	Peptidase family M48
M478_2082	PF00456	Transketolase, thiamine diphosphate binding domain
M478_2082	PF02779	Transketolase, pyrimidine binding domain
M478_2082	PF02780	Transketolase, C-terminal domain
M478_2084	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M478_2084	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
M478_2085	PF00162	Phosphoglycerate kinase
M478_2086	PF01116	Fructose-bisphosphate aldolase class-II
M478_2087	PF00924	Mechanosensitive ion channel
M478_2087	PF05552	Conserved TM helix
M478_2088	PF01810	M478_2088
M478_2089	PF04402	Protein of unknown function (DUF541)
M478_209	PF07191	zinc-ribbons
M478_2090	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2090	PF03466	LysR substrate binding domain
M478_2091	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
M478_2092	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
M478_2092	PF01842	ACT domain
M478_2092	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
M478_2093	PF01812	5-formyltetrahydrofolate cyclo-ligase family
M478_2094	PF05164	Cell division protein ZapA
M478_2095	PF03695	Uncharacterised protein family (UPF0149)
M478_2096	PF00557	Metallopeptidase family M24
M478_2096	PF05195	Aminopeptidase P, N-terminal domain
M478_2097	PF01494	FAD binding domain
M478_2098	PF01494	FAD binding domain
M478_2099	PF01571	Aminomethyltransferase folate-binding domain
M478_2099	PF08669	Glycine cleavage T-protein C-terminal barrel domain
M478_21	PF04055	Radical SAM superfamily
M478_21	PF16881	M478_21
M478_210	PF02601	M478_210
M478_210	PF13742	M478_210
M478_2100	PF01597	Glycine cleavage H-protein
M478_2101	PF02347	Glycine cleavage system P-protein
M478_2102	PF13924	M478_2102
M478_2104	PF03895	YadA-like C-terminal region
M478_2104	PF05658	Head domain of trimeric autotransporter adhesin
M478_2104	PF05662	Coiled stalk of trimeric autotransporter adhesin
M478_2106	PF03006	M478_2106
M478_2107	PF09933	M478_2107
M478_2108	PF00665	Integrase core domain
M478_2108	PF02796	Helix-turn-helix domain of resolvase
M478_211	PF00478	IMP dehydrogenase / GMP reductase domain
M478_211	PF00571	CBS domain
M478_2110	PF01695	IstB-like ATP binding protein
M478_2111	PF09933	M478_2111
M478_2112	PF01571	Aminomethyltransferase folate-binding domain
M478_2113	PF03937	Flavinator of succinate dehydrogenase
M478_2114	PF00072	Response regulator receiver domain
M478_2114	PF00486	Transcriptional regulatory protein, C terminal
M478_2115	PF00512	His Kinase A (phospho-acceptor) domain
M478_2115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_2115	PF14827	Sensory domain of two-component sensor kinase
M478_2116	PF06123	M478_2116
M478_2117	PF00258	Flavodoxin
M478_2118	PF00589	Phage integrase family
M478_2118	PF02899	Phage integrase, N-terminal SAM-like domain
M478_2119	PF10411	Disulfide bond isomerase protein N-terminus
M478_2119	PF13098	Thioredoxin-like domain
M478_212	PF00117	Glutamine amidotransferase class-I
M478_212	PF00958	GMP synthase C terminal domain
M478_212	PF02540	NAD synthase
M478_2120	PF01368	DHH family
M478_2120	PF02272	DHHA1 domain
M478_2121	PF00472	RF-1 domain
M478_2121	PF03462	PCRF domain
M478_2122	PF00152	tRNA synthetases class II (D, K and N)
M478_2122	PF01336	OB-fold nucleic acid binding domain
M478_2124	PF00589	Phage integrase family
M478_2124	PF13356	Domain of unknown function (DUF4102)
M478_2126	PF05016	Plasmid stabilisation system protein
M478_2127	PF01381	Helix-turn-helix
M478_2128	PF15723	M478_2128
M478_2129	PF15731	M478_2129
M478_213	PF01797	Transposase IS200 like
M478_2130	PF03288	Poxvirus D5 protein-like
M478_2130	PF08273	Zinc-binding domain of primase-helicase
M478_2130	PF08706	M478_2130
M478_2130	PF13362	Toprim domain
M478_2131	PF05973	M478_2131
M478_2132	PF05930	Prophage CP4-57 regulatory protein (AlpA)
M478_2136	PF02661	Fic/DOC family
M478_2137	PF05488	PAAR motif
M478_2137	PF06958	S-type Pyocin
M478_2138	PF14206	M478_2138
M478_214	PF05638	Protein of unknown function (DUF796)
M478_2140	PF09204	Bacterial self-protective colicin-like immunity
M478_2142	PF11340	M478_2142
M478_2144	PF05488	PAAR motif
M478_2145	PF12977	Domain of Unknown Function with PDB structure (DUF3861)
M478_2146	PF03551	Transcriptional regulator PadR-like family
M478_2147	PF05708	Orthopoxvirus protein of unknown function (DUF830)
M478_2149	PF13407	Periplasmic binding protein domain
M478_2150	PF02653	M478_2150
M478_2151	PF00005	ABC transporter
M478_2152	PF00005	ABC transporter
M478_2152	PF08402	TOBE domain
M478_2153	PF13416	Bacterial extracellular solute-binding protein
M478_2154	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2155	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2156	PF07745	Glycosyl hydrolase family 53
M478_2157	PF02449	Beta-galactosidase
M478_2157	PF08532	Beta-galactosidase trimerisation domain
M478_2157	PF08533	Beta-galactosidase C-terminal domain
M478_2158	PF00367	phosphotransferase system, EIIB
M478_2159	PF02264	LamB porin
M478_216	PF06836	M478_216
M478_2160	PF00356	Bacterial regulatory proteins, lacI family
M478_2160	PF13377	Periplasmic binding protein-like domain
M478_2161	PF01055	Glycosyl hydrolases family 31
M478_2161	PF13802	Galactose mutarotase-like
M478_2161	PF17137	M478_2161
M478_2162	PF07690	Major Facilitator Superfamily
M478_2163	PF00356	Bacterial regulatory proteins, lacI family
M478_2163	PF13377	Periplasmic binding protein-like domain
M478_2164	PF01965	DJ-1/PfpI family
M478_2166	PF01116	Fructose-bisphosphate aldolase class-II
M478_2167	PF10022	M478_2167
M478_2168	PF00884	Sulfatase
M478_2169	PF04055	Radical SAM superfamily
M478_2169	PF13186	Iron-sulfur cluster-binding domain
M478_217	PF06836	M478_217
M478_2170	PF07470	Glycosyl Hydrolase Family 88
M478_2171	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_2172	PF01979	Amidohydrolase family
M478_2173	PF03610	PTS system fructose IIA component
M478_2174	PF03613	M478_2174
M478_2175	PF03609	M478_2175
M478_2176	PF03830	PTS system sorbose subfamily IIB component
M478_2177	PF01380	SIS domain
M478_2178	PF08013	Tagatose 6 phosphate kinase
M478_2179	PF00455	M478_2179
M478_2179	PF08220	DeoR-like helix-turn-helix domain
M478_218	PF06836	M478_218
M478_2180	PF00884	Sulfatase
M478_2181	PF01797	Transposase IS200 like
M478_2183	PF00665	Integrase core domain
M478_2185	PF01695	IstB-like ATP binding protein
M478_2186	PF00501	AMP-binding enzyme
M478_2186	PF00550	Phosphopantetheine attachment site
M478_2186	PF00668	Condensation domain
M478_2187	PF00501	AMP-binding enzyme
M478_2187	PF00550	Phosphopantetheine attachment site
M478_2188	PF00501	AMP-binding enzyme
M478_2188	PF00550	Phosphopantetheine attachment site
M478_2188	PF00668	Condensation domain
M478_2188	PF00975	Thioesterase domain
M478_2188	PF08242	Methyltransferase domain
M478_2190	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_2191	PF00975	Thioesterase domain
M478_2192	PF07690	Major Facilitator Superfamily
M478_2193	PF00005	ABC transporter
M478_2193	PF00664	ABC transporter transmembrane region
M478_2194	PF00005	ABC transporter
M478_2194	PF00664	ABC transporter transmembrane region
M478_2198	PF02447	M478_2198
M478_22	PF03099	Biotin/lipoate A/B protein ligase family
M478_220	PF00872	M478_220
M478_2202	PF03797	Autotransporter beta-domain
M478_2203	PF03797	Autotransporter beta-domain
M478_2204	PF05954	Phage late control gene D protein (GPD)
M478_2204	PF06715	Gp5 C-terminal repeat (3 copies)
M478_2206	PF03527	M478_2206
M478_2206	PF05593	M478_2206
M478_2209	PF00939	Sodium:sulfate symporter transmembrane region
M478_2210	PF00356	Bacterial regulatory proteins, lacI family
M478_2210	PF13377	Periplasmic binding protein-like domain
M478_2211	PF00665	Integrase core domain
M478_2211	PF13276	M478_2211
M478_2212	PF00150	Cellulase (glycosyl hydrolase family 5)
M478_2213	PF13518	Helix-turn-helix domain
M478_2214	PF00669	Bacterial flagellin N-terminal helical region
M478_2214	PF00700	Bacterial flagellin C-terminal helical region
M478_2215	PF00486	Transcriptional regulatory protein, C terminal
M478_2218	PF00669	Bacterial flagellin N-terminal helical region
M478_2219	PF00460	Flagella basal body rod protein
M478_2219	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_222	PF06092	M478_222
M478_2220	PF10135	M478_2220
M478_2221	PF02119	M478_2221
M478_2222	PF02107	M478_2222
M478_2223	PF00460	Flagella basal body rod protein
M478_2223	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_2224	PF00460	Flagella basal body rod protein
M478_2224	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_2225	PF00460	Flagella basal body rod protein
M478_2225	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_2225	PF07559	Flagellar basal body protein FlaE
M478_2226	PF03963	M478_2226
M478_2226	PF13860	FlgD Ig-like domain
M478_2226	PF13861	FlgD Tudor-like domain
M478_2227	PF00460	Flagella basal body rod protein
M478_2227	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
M478_2228	PF00460	Flagella basal body rod protein
M478_2229	PF13144	SAF-like
M478_223	PF08543	Phosphomethylpyrimidine kinase
M478_2230	PF04316	Anti-sigma-28 factor, FlgM
M478_2231	PF05130	FlgN protein
M478_2232	PF02050	Flagellar FliJ protein
M478_2233	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M478_2234	PF02108	M478_2234
M478_2234	PF09811	M478_2234
M478_2235	PF01706	FliG C-terminal domain
M478_2235	PF14841	FliG middle domain
M478_2235	PF14842	FliG N-terminal domain
M478_2236	PF01514	Secretory protein of YscJ/FliF family
M478_2236	PF08345	M478_2236
M478_2237	PF02049	M478_2237
M478_2238	PF00158	Sigma-54 interaction domain
M478_2238	PF02954	Bacterial regulatory protein, Fis family
M478_2239	PF01052	Surface presentation of antigens (SPOA)
M478_2240	PF01052	Surface presentation of antigens (SPOA)
M478_2241	PF00813	M478_2241
M478_2242	PF01313	M478_2242
M478_2243	PF01311	M478_2243
M478_2244	PF01312	FlhB HrpN YscU SpaS Family
M478_2245	PF00771	FHIPEP family
M478_2246	PF00771	FHIPEP family
M478_2247	PF11153	M478_2247
M478_2249	PF01497	Periplasmic binding protein
M478_2250	PF00419	Fimbrial protein
M478_2251	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_2251	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_2252	PF00577	Outer membrane usher protein
M478_2252	PF13953	PapC C-terminal domain
M478_2252	PF13954	PapC N-terminal domain
M478_2253	PF01797	Transposase IS200 like
M478_2254	PF01478	Type IV leader peptidase family
M478_2256	PF13629	M478_2256
M478_2257	PF00263	M478_2257
M478_226	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
M478_2260	PF00437	Type II/IV secretion system protein
M478_2261	PF00482	Type II secretion system (T2SS), protein F
M478_2262	PF00482	Type II secretion system (T2SS), protein F
M478_2264	PF07811	M478_2264
M478_2265	PF16964	M478_2265
M478_2267	PF02472	Biopolymer transport protein ExbD/TolR
M478_2269	PF01618	M478_2269
M478_227	PF00781	Diacylglycerol kinase catalytic domain
M478_2270	PF01053	Cys/Met metabolism PLP-dependent enzyme
M478_2271	PF09335	M478_2271
M478_2272	PF06719	M478_2272
M478_2272	PF12833	Helix-turn-helix domain
M478_2273	PF00465	Iron-containing alcohol dehydrogenase
M478_2274	PF00248	Aldo/keto reductase family
M478_2275	PF11842	M478_2275
M478_2276	PF04055	Radical SAM superfamily
M478_2276	PF08497	M478_2276
M478_2277	PF07731	Multicopper oxidase
M478_2277	PF07732	Multicopper oxidase
M478_2278	PF01553	Acyltransferase
M478_2279	PF00521	DNA gyrase/topoisomerase IV, subunit A
M478_2279	PF03989	DNA gyrase C-terminal domain, beta-propeller
M478_228	PF01136	M478_228
M478_228	PF16325	M478_228
M478_2280	PF02525	Flavodoxin-like fold
M478_2281	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2281	PF03466	LysR substrate binding domain
M478_2282	PF00204	DNA gyrase B
M478_2282	PF00986	DNA gyrase B subunit, carboxyl terminus
M478_2282	PF01751	Toprim domain
M478_2282	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_2283	PF05728	Uncharacterised protein family (UPF0227)
M478_2284	PF00149	Calcineurin-like phosphoesterase
M478_2285	PF06853	M478_2285
M478_2286	PF00293	NUDIX domain
M478_2287	PF02321	Outer membrane efflux protein
M478_2289	PF06693	M478_2289
M478_229	PF07411	Domain of unknown function (DUF1508)
M478_2290	PF03738	Glutathionylspermidine synthase preATP-grasp
M478_2291	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
M478_2292	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
M478_2294	PF04380	M478_2294
M478_2295	PF13520	Amino acid permease
M478_2296	PF00294	pfkB family carbohydrate kinase
M478_2296	PF01467	Cytidylyltransferase
M478_2297	PF03710	Glutamate-ammonia ligase adenylyltransferase
M478_2297	PF08335	GlnD PII-uridylyltransferase
M478_2298	PF01928	CYTH domain
M478_2299	PF08239	Bacterial SH3 domain
M478_23	PF04359	Protein of unknown function (DUF493)
M478_230	PF00072	Response regulator receiver domain
M478_230	PF00486	Transcriptional regulatory protein, C terminal
M478_2300	PF01743	Poly A polymerase head domain
M478_2300	PF01966	HD domain
M478_2300	PF12627	Probable RNA and SrmB- binding site of polymerase A
M478_2301	PF02673	M478_2301
M478_2302	PF02152	Dihydroneopterin aldolase
M478_2303	PF02660	M478_2303
M478_2304	PF00814	Glycoprotease family
M478_2305	PF01165	Ribosomal protein S21
M478_2306	PF01807	CHC2 zinc finger
M478_2306	PF08275	DNA primase catalytic core, N-terminal domain
M478_2306	PF08278	DNA primase DnaG DnaB-binding
M478_2306	PF10410	DnaB-helicase binding domain of primase
M478_2306	PF13155	Toprim-like
M478_2307	PF00140	Sigma-70 factor, region 1
M478_2307	PF03979	Sigma-70 factor, region 1
M478_2307	PF04539	Sigma-70 region 3
M478_2307	PF04542	Sigma-70 region 2
M478_2307	PF04545	Sigma-70, region 4
M478_2307	PF04546	Sigma-70, non-essential region
M478_231	PF00512	His Kinase A (phospho-acceptor) domain
M478_231	PF00672	HAMP domain
M478_2310	PF03592	Terminase small subunit
M478_2315	PF02661	Fic/DOC family
M478_2318	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2318	PF03466	LysR substrate binding domain
M478_232	PF07690	Major Facilitator Superfamily
M478_2320	PF08803	Putative mono-oxygenase ydhR
M478_2321	PF01042	Endoribonuclease L-PSP
M478_2322	PF01042	Endoribonuclease L-PSP
M478_2323	PF08348	M478_2323
M478_2324	PF10604	Polyketide cyclase / dehydrase and lipid transport
M478_2325	PF03553	M478_2325
M478_2326	PF00155	Aminotransferase class I and II
M478_2328	PF17090	M478_2328
M478_2329	PF13437	HlyD family secretion protein
M478_2329	PF13533	Biotin-lipoyl like
M478_233	PF00873	AcrB/AcrD/AcrF family
M478_2330	PF04632	M478_2330
M478_2331	PF02321	Outer membrane efflux protein
M478_2332	PF00933	Glycosyl hydrolase family 3 N terminal domain
M478_2332	PF01915	Glycosyl hydrolase family 3 C-terminal domain
M478_2332	PF14310	Fibronectin type III-like domain
M478_2334	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2335	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2336	PF01547	Bacterial extracellular solute-binding protein
M478_2337	PF00356	Bacterial regulatory proteins, lacI family
M478_2337	PF13377	Periplasmic binding protein-like domain
M478_2339	PF00005	ABC transporter
M478_2339	PF08402	TOBE domain
M478_234	PF00873	AcrB/AcrD/AcrF family
M478_2340	PF10091	Putative glucoamylase
M478_2345	PF15599	M478_2345
M478_2348	PF04829	M478_2348
M478_2348	PF05860	haemagglutination activity domain
M478_2348	PF13018	M478_2348
M478_2348	PF13332	M478_2348
M478_2349	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
M478_2349	PF08479	POTRA domain, ShlB-type
M478_2349	PF17287	M478_2349
M478_235	PF13437	HlyD family secretion protein
M478_235	PF13533	Biotin-lipoyl like
M478_2350	PF00092	von Willebrand factor type A domain
M478_2351	PF02342	TerD domain
M478_2352	PF00092	von Willebrand factor type A domain
M478_2353	PF00092	von Willebrand factor type A domain
M478_2353	PF15616	M478_2353
M478_2354	PF13672	Protein phosphatase 2C
M478_2355	PF00069	Protein kinase domain
M478_2356	PF03729	M478_2356
M478_2357	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
M478_2357	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_2358	PF05175	Methyltransferase small domain
M478_2359	PF03212	Pertactin
M478_2359	PF03797	Autotransporter beta-domain
M478_236	PF00005	ABC transporter
M478_236	PF08402	TOBE domain
M478_2360	PF01863	Protein of unknown function DUF45
M478_2361	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_2362	PF00375	Sodium:dicarboxylate symporter family
M478_2364	PF01797	Transposase IS200 like
M478_2365	PF10688	M478_2365
M478_2366	PF04295	M478_2366
M478_2366	PF08666	SAF domain
M478_2367	PF01232	Mannitol dehydrogenase Rossmann domain
M478_2367	PF08125	Mannitol dehydrogenase C-terminal domain
M478_2368	PF02614	Glucuronate isomerase
M478_2369	PF07690	Major Facilitator Superfamily
M478_237	PF00155	Aminotransferase class I and II
M478_237	PF00392	Bacterial regulatory proteins, gntR family
M478_2370	PF00392	Bacterial regulatory proteins, gntR family
M478_2370	PF07729	FCD domain
M478_2372	PF09335	M478_2372
M478_2373	PF13721	SecD export protein N-terminal TM region
M478_2374	PF06476	M478_2374
M478_2375	PF05957	M478_2375
M478_2376	PF07332	M478_2376
M478_2377	PF13997	M478_2377
M478_2378	PF07681	M478_2378
M478_238	PF00202	Aminotransferase class-III
M478_2380	PF00665	Integrase core domain
M478_2380	PF02796	Helix-turn-helix domain of resolvase
M478_2381	PF01695	IstB-like ATP binding protein
M478_2382	PF00293	NUDIX domain
M478_2383	PF01043	SecA preprotein cross-linking domain
M478_2383	PF02810	SEC-C motif
M478_2383	PF07516	SecA Wing and Scaffold domain
M478_2383	PF07517	SecA DEAD-like domain
M478_2384	PF06558	M478_2384
M478_2385	PF05258	M478_2385
M478_2386	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
M478_2387	PF00091	Tubulin/FtsZ family, GTPase domain
M478_2387	PF12327	FtsZ family, C-terminal domain
M478_2388	PF02491	SHS2 domain inserted in FTSA
M478_2388	PF14450	Cell division protein FtsA
M478_2389	PF03799	Cell division protein FtsQ
M478_2389	PF08478	POTRA domain, FtsQ-type
M478_239	PF13416	Bacterial extracellular solute-binding protein
M478_2390	PF01820	D-ala D-ala ligase N-terminus
M478_2390	PF07478	D-ala D-ala ligase C-terminus
M478_2391	PF01225	Mur ligase family, catalytic domain
M478_2391	PF02875	Mur ligase family, glutamate ligase domain
M478_2391	PF08245	Mur ligase middle domain
M478_2392	PF03033	Glycosyltransferase family 28 N-terminal domain
M478_2392	PF04101	Glycosyltransferase family 28 C-terminal domain
M478_2393	PF01098	M478_2393
M478_2394	PF02875	Mur ligase family, glutamate ligase domain
M478_2394	PF08245	Mur ligase middle domain
M478_2395	PF00953	Glycosyl transferase family 4
M478_2395	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
M478_2396	PF01225	Mur ligase family, catalytic domain
M478_2396	PF02875	Mur ligase family, glutamate ligase domain
M478_2396	PF08245	Mur ligase middle domain
M478_2397	PF01225	Mur ligase family, catalytic domain
M478_2397	PF02875	Mur ligase family, glutamate ligase domain
M478_2397	PF08245	Mur ligase middle domain
M478_2398	PF00905	Penicillin binding protein transpeptidase domain
M478_2398	PF03717	Penicillin-binding Protein dimerisation domain
M478_2399	PF04999	M478_2399
M478_24	PF00768	D-alanyl-D-alanine carboxypeptidase
M478_24	PF07943	Penicillin-binding protein 5, C-terminal domain
M478_240	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2400	PF01795	MraW methylase family
M478_2401	PF02381	MraZ protein
M478_2402	PF06610	M478_2402
M478_2403	PF00356	Bacterial regulatory proteins, lacI family
M478_2403	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
M478_2404	PF01797	Transposase IS200 like
M478_2405	PF01842	ACT domain
M478_2405	PF10369	Small subunit of acetolactate synthase
M478_2406	PF00205	Thiamine pyrophosphate enzyme, central domain
M478_2406	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M478_2406	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
M478_2407	PF00501	AMP-binding enzyme
M478_2408	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2408	PF03466	LysR substrate binding domain
M478_241	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2410	PF01797	Transposase IS200 like
M478_2411	PF00665	Integrase core domain
M478_2411	PF02796	Helix-turn-helix domain of resolvase
M478_2412	PF01695	IstB-like ATP binding protein
M478_2413	PF01113	Dihydrodipicolinate reductase, N-terminus
M478_2413	PF05173	Dihydrodipicolinate reductase, C-terminus
M478_2414	PF00117	Glutamine amidotransferase class-I
M478_2414	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
M478_2415	PF02142	MGS-like domain
M478_2415	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
M478_2415	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
M478_2416	PF01810	M478_2416
M478_2417	PF06738	M478_2417
M478_2418	PF12821	M478_2418
M478_2419	PF00186	Dihydrofolate reductase
M478_242	PF00012	Hsp70 protein
M478_2420	PF01797	Transposase IS200 like
M478_2421	PF12582	M478_2421
M478_2422	PF00149	Calcineurin-like phosphoesterase
M478_2423	PF04379	Protein of unknown function (DUF525)
M478_2424	PF00398	Ribosomal RNA adenine dimethylase
M478_2425	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
M478_2426	PF00639	PPIC-type PPIASE domain
M478_2426	PF09312	SurA N-terminal domain
M478_2427	PF03968	OstA-like protein
M478_2427	PF04453	Organic solvent tolerance protein
M478_2428	PF00226	DnaJ domain
M478_2428	PF05099	Tellurite resistance protein TerB
M478_2429	PF00849	RNA pseudouridylate synthase
M478_243	PF00571	CBS domain
M478_243	PF01769	Divalent cation transporter
M478_243	PF03448	MgtE intracellular N domain
M478_2430	PF10074	M478_2430
M478_2431	PF06812	M478_2431
M478_2432	PF05591	M478_2432
M478_2433	PF05943	M478_2433
M478_2434	PF05638	Protein of unknown function (DUF796)
M478_2435	PF04965	Gene 25-like lysozyme
M478_2436	PF05947	M478_2436
M478_2437	PF06996	M478_2437
M478_2438	PF00004	ATPase family associated with various cellular activities (AAA)
M478_2438	PF02861	Clp amino terminal domain
M478_2438	PF07724	AAA domain (Cdc48 subfamily)
M478_2439	PF05954	Phage late control gene D protein (GPD)
M478_244	PF02541	Ppx/GppA phosphatase family
M478_2440	PF09937	M478_2440
M478_2440	PF13599	Pentapeptide repeats (9 copies)
M478_2441	PF00805	Pentapeptide repeats (8 copies)
M478_2441	PF13599	Pentapeptide repeats (9 copies)
M478_2442	PF12059	M478_2442
M478_2443	PF13665	M478_2443
M478_2444	PF12790	Type VI secretion lipoprotein
M478_2445	PF05936	M478_2445
M478_2446	PF00691	OmpA family
M478_2446	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
M478_2447	PF06744	M478_2447
M478_2447	PF06761	M478_2447
M478_2447	PF14331	M478_2447
M478_2449	PF00176	SNF2 family N-terminal domain
M478_2449	PF00271	Helicase conserved C-terminal domain
M478_2449	PF12137	RNA polymerase recycling family C-terminal
M478_245	PF02503	Polyphosphate kinase middle domain
M478_245	PF13089	Polyphosphate kinase N-terminal domain
M478_245	PF13090	Polyphosphate kinase C-terminal domain
M478_2450	PF00136	DNA polymerase family B
M478_2450	PF03104	DNA polymerase family B, exonuclease domain
M478_2451	PF09335	M478_2451
M478_2452	PF00005	ABC transporter
M478_2453	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2454	PF13343	Bacterial extracellular solute-binding protein
M478_2456	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_2456	PF12793	M478_2456
M478_2457	PF07690	Major Facilitator Superfamily
M478_2458	PF00694	Aconitase C-terminal domain
M478_2459	PF00330	Aconitase family (aconitate hydratase)
M478_246	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2460	PF00180	Isocitrate/isopropylmalate dehydrogenase
M478_2461	PF00682	HMGL-like
M478_2461	PF08502	LeuA allosteric (dimerisation) domain
M478_2462	PF01797	Transposase IS200 like
M478_2463	PF02401	LytB protein
M478_2464	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
M478_2465	PF01252	M478_2465
M478_2466	PF00133	tRNA synthetases class I (I, L, M and V)
M478_2466	PF06827	Zinc finger found in FPG and IleRS
M478_2466	PF08264	Anticodon-binding domain of tRNA
M478_2467	PF01687	Riboflavin kinase
M478_2467	PF06574	FAD synthetase
M478_2468	PF01649	Ribosomal protein S20
M478_2469	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2469	PF03466	LysR substrate binding domain
M478_247	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2470	PF06965	Na+/H+ antiporter 1
M478_2471	PF00226	DnaJ domain
M478_2471	PF00684	DnaJ central domain
M478_2471	PF01556	DnaJ C terminal domain
M478_2472	PF00012	Hsp70 protein
M478_2473	PF01184	M478_2473
M478_2475	PF07690	Major Facilitator Superfamily
M478_2476	PF00994	Probable molybdopterin binding domain
M478_2477	PF00923	Transaldolase
M478_2478	PF03883	M478_2478
M478_248	PF00005	ABC transporter
M478_2480	PF00291	Pyridoxal-phosphate dependent enzyme
M478_2480	PF14821	Threonine synthase N terminus
M478_2481	PF00288	GHMP kinases N terminal domain
M478_2481	PF08544	GHMP kinases C terminal
M478_2482	PF00696	Amino acid kinase family
M478_2482	PF00742	Homoserine dehydrogenase
M478_2482	PF01842	ACT domain
M478_2482	PF03447	Homoserine dehydrogenase, NAD binding domain
M478_2482	PF13840	ACT domain
M478_2484	PF00072	Response regulator receiver domain
M478_2484	PF00486	Transcriptional regulatory protein, C terminal
M478_2485	PF05981	M478_2485
M478_2487	PF00300	Histidine phosphatase superfamily (branch 1)
M478_2488	PF06445	GyrI-like small molecule binding domain
M478_2488	PF12833	Helix-turn-helix domain
M478_2489	PF01371	Trp repressor protein
M478_249	PF03692	M478_249
M478_2490	PF01931	Protein of unknown function DUF84
M478_2491	PF01464	Transglycosylase SLT domain
M478_2491	PF14718	Soluble lytic murein transglycosylase L domain
M478_2492	PF00122	E1-E2 ATPase
M478_2492	PF00689	Cation transporting ATPase, C-terminus
M478_2492	PF00690	Cation transporter/ATPase, N-terminus
M478_2492	PF00702	haloacid dehalogenase-like hydrolase
M478_2493	PF13689	M478_2493
M478_2494	PF00990	GGDEF domain
M478_2494	PF17152	M478_2494
M478_2495	PF00691	OmpA family
M478_2496	PF00005	ABC transporter
M478_2497	PF00005	ABC transporter
M478_2497	PF12848	ABC transporter
M478_2498	PF02661	Fic/DOC family
M478_2498	PF13776	M478_2498
M478_2499	PF01381	Helix-turn-helix
M478_2499	PF13521	AAA domain
M478_25	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
M478_25	PF05036	Sporulation related domain
M478_2500	PF13481	AAA domain
M478_2500	PF13541	Subunit ChlI of Mg-chelatase
M478_2501	PF12710	haloacid dehalogenase-like hydrolase
M478_2502	PF10144	M478_2502
M478_2503	PF01048	Phosphorylase superfamily
M478_2504	PF01676	Metalloenzyme superfamily
M478_2505	PF00591	Glycosyl transferase family, a/b domain
M478_2505	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
M478_2506	PF00591	Glycosyl transferase family, a/b domain
M478_2506	PF02885	Glycosyl transferase family, helical bundle domain
M478_2507	PF01791	DeoC/LacD family aldolase
M478_2508	PF01773	Na+ dependent nucleoside transporter N-terminus
M478_2508	PF07662	Na+ dependent nucleoside transporter C-terminus
M478_2508	PF07670	Nucleoside recognition
M478_2509	PF01026	TatD related DNase
M478_251	PF13302	Acetyltransferase (GNAT) domain
M478_2510	PF01734	Patatin-like phospholipase
M478_2511	PF07043	M478_2511
M478_2512	PF04972	BON domain
M478_2513	PF00009	Elongation factor Tu GTP binding domain
M478_2513	PF03144	Elongation factor Tu domain 2
M478_2513	PF16658	M478_2513
M478_2514	PF00583	Acetyltransferase (GNAT) family
M478_2515	PF03603	DNA polymerase III psi subunit
M478_2516	PF05175	Methyltransferase small domain
M478_2516	PF08468	Methyltransferase small domain N-terminal
M478_2518	PF07256	M478_2518
M478_2519	PF00990	GGDEF domain
M478_252	PF00551	Formyl transferase
M478_2520	PF01095	Pectinesterase
M478_2522	PF00873	AcrB/AcrD/AcrF family
M478_2523	PF16576	M478_2523
M478_2524	PF06305	M478_2524
M478_2525	PF04932	M478_2525
M478_2526	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
M478_2527	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_2527	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_2528	PF04198	Putative sugar-binding domain
M478_2529	PF00325	Bacterial regulatory proteins, crp family
M478_253	PF00586	AIR synthase related protein, N-terminal domain
M478_253	PF02769	AIR synthase related protein, C-terminal domain
M478_2530	PF00005	ABC transporter
M478_2531	PF02653	M478_2531
M478_2532	PF02653	M478_2532
M478_2533	PF13407	Periplasmic binding protein domain
M478_2534	PF01791	DeoC/LacD family aldolase
M478_2535	PF03992	Antibiotic biosynthesis monooxygenase
M478_2536	PF10696	M478_2536
M478_2537	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
M478_2537	PF00381	PTS HPr component phosphorylation site
M478_2537	PF00391	PEP-utilising enzyme, mobile domain
M478_2537	PF02896	PEP-utilising enzyme, TIM barrel domain
M478_2537	PF05524	PEP-utilising enzyme, N-terminal
M478_2538	PF02378	Phosphotransferase system, EIIC
M478_2539	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
M478_254	PF14681	Uracil phosphoribosyltransferase
M478_2540	PF12833	Helix-turn-helix domain
M478_2541	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
M478_2543	PF05987	M478_2543
M478_2544	PF01435	Peptidase family M48
M478_2545	PF09983	M478_2545
M478_2545	PF11795	M478_2545
M478_2546	PF13558	Putative exonuclease SbcCD, C subunit
M478_255	PF01797	Transposase IS200 like
M478_2552	PF01555	DNA methylase
M478_2553	PF01527	Transposase
M478_2554	PF10117	M478_2554
M478_2555	PF07728	AAA domain (dynein-related subfamily)
M478_2556	PF00665	Integrase core domain
M478_2556	PF02796	Helix-turn-helix domain of resolvase
M478_2558	PF01695	IstB-like ATP binding protein
M478_2559	PF02580	D-Tyr-tRNA(Tyr) deacylase
M478_256	PF00308	Bacterial dnaA  protein
M478_2560	PF03631	M478_2560
M478_2561	PF13419	Haloacid dehalogenase-like hydrolase
M478_2562	PF00009	Elongation factor Tu GTP binding domain
M478_2562	PF00679	Elongation factor G C-terminus
M478_2562	PF03144	Elongation factor Tu domain 2
M478_2563	PF00120	Glutamine synthetase, catalytic domain
M478_2563	PF03951	Glutamine synthetase, beta-Grasp domain
M478_2564	PF00512	His Kinase A (phospho-acceptor) domain
M478_2564	PF00989	PAS fold
M478_2564	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_2565	PF00072	Response regulator receiver domain
M478_2565	PF00158	Sigma-54 interaction domain
M478_2565	PF02954	Bacterial regulatory protein, Fis family
M478_2566	PF04055	Radical SAM superfamily
M478_2566	PF06969	HemN C-terminal domain
M478_2567	PF04220	M478_2567
M478_2568	PF01926	50S ribosome-binding GTPase
M478_2569	PF01797	Transposase IS200 like
M478_257	PF03960	ArsC family
M478_2570	PF01797	Transposase IS200 like
M478_2571	PF00476	DNA polymerase family A
M478_2571	PF01367	5'-3' exonuclease, C-terminal SAM fold
M478_2571	PF01612	3'-5' exonuclease
M478_2571	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
M478_2572	PF01323	DSBA-like thioredoxin domain
M478_2573	PF01636	Phosphotransferase enzyme family
M478_2574	PF06288	Protein of unknown function (DUF1040)
M478_2575	PF12804	MobA-like NTP transferase domain
M478_2576	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
M478_2577	PF00872	M478_2577
M478_258	PF01435	Peptidase family M48
M478_258	PF07720	Tetratricopeptide repeat
M478_258	PF14559	Tetratricopeptide repeat
M478_2584	PF01808	AICARFT/IMPCHase bienzyme
M478_2584	PF02142	MGS-like domain
M478_2585	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
M478_2585	PF02843	Phosphoribosylglycinamide synthetase, C domain
M478_2585	PF02844	Phosphoribosylglycinamide synthetase, N domain
M478_2586	PF07356	M478_2586
M478_2587	PF00216	Bacterial DNA-binding protein
M478_2588	PF04222	Protein of unknown function (DUF416)
M478_2589	PF04493	Endonuclease V
M478_259	PF01594	M478_259
M478_2590	PF01208	Uroporphyrinogen decarboxylase (URO-D)
M478_2592	PF00293	NUDIX domain
M478_2592	PF09297	NADH pyrophosphatase zinc ribbon domain
M478_2593	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
M478_2594	PF01964	ThiC family
M478_2594	PF13667	ThiC-associated domain
M478_2595	PF02581	Thiamine monophosphate synthase/TENI
M478_2596	PF00899	ThiF family
M478_2597	PF02597	ThiS family
M478_2598	PF05690	Thiazole biosynthesis protein ThiG
M478_2599	PF04055	Radical SAM superfamily
M478_2599	PF06968	Biotin and Thiamin Synthesis associated domain
M478_26	PF01098	M478_26
M478_2600	PF01797	Transposase IS200 like
M478_2601	PF00623	RNA polymerase Rpb1, domain 2
M478_2601	PF04983	RNA polymerase Rpb1, domain 3
M478_2601	PF04997	RNA polymerase Rpb1, domain 1
M478_2601	PF04998	RNA polymerase Rpb1, domain 5
M478_2601	PF05000	RNA polymerase Rpb1, domain 4
M478_2602	PF00562	RNA polymerase Rpb2, domain 6
M478_2602	PF04560	RNA polymerase Rpb2, domain 7
M478_2602	PF04561	RNA polymerase Rpb2, domain 2
M478_2602	PF04563	RNA polymerase beta subunit
M478_2602	PF04565	RNA polymerase Rpb2, domain 3
M478_2602	PF10385	RNA polymerase beta subunit external 1 domain
M478_2604	PF00542	Ribosomal protein L7/L12 C-terminal domain
M478_2604	PF16320	M478_2604
M478_2605	PF00466	Ribosomal protein L10
M478_2606	PF00687	Ribosomal protein L1p/L10e family
M478_2607	PF00298	Ribosomal protein L11, RNA binding domain
M478_2607	PF03946	Ribosomal protein L11, N-terminal domain
M478_2608	PF00467	KOW motif
M478_2608	PF02357	Transcription termination factor nusG
M478_2609	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
M478_2610	PF00009	Elongation factor Tu GTP binding domain
M478_2610	PF03143	Elongation factor Tu C-terminal domain
M478_2610	PF03144	Elongation factor Tu domain 2
M478_2615	PF01695	IstB-like ATP binding protein
M478_2616	PF00665	Integrase core domain
M478_2616	PF02796	Helix-turn-helix domain of resolvase
M478_2617	PF13673	Acetyltransferase (GNAT) domain
M478_2618	PF00485	Phosphoribulokinase / Uridine kinase family
M478_2619	PF02237	Biotin protein ligase C terminal domain
M478_2619	PF03099	Biotin/lipoate A/B protein ligase family
M478_2619	PF08279	HTH domain
M478_262	PF00578	AhpC/TSA family
M478_2620	PF01565	FAD binding domain
M478_2620	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
M478_2626	PF12724	Flavodoxin domain
M478_2627	PF02386	Cation transport protein
M478_2628	PF01205	Uncharacterized protein family UPF0029
M478_2628	PF09186	Domain of unknown function (DUF1949)
M478_2629	PF01797	Transposase IS200 like
M478_263	PF13740	ACT domain
M478_2630	PF01205	Uncharacterized protein family UPF0029
M478_2631	PF00557	Metallopeptidase family M24
M478_2632	PF00378	Enoyl-CoA hydratase/isomerase family
M478_2632	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
M478_2632	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
M478_2633	PF00108	Thiolase, N-terminal domain
M478_2633	PF02803	Thiolase, C-terminal domain
M478_2634	PF00175	Oxidoreductase NAD-binding domain
M478_2634	PF00970	Oxidoreductase FAD-binding domain
M478_2635	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
M478_2636	PF02357	Transcription termination factor nusG
M478_2637	PF00490	Delta-aminolevulinic acid dehydratase
M478_2638	PF01026	TatD related DNase
M478_2639	PF01695	IstB-like ATP binding protein
M478_264	PF00701	Dihydrodipicolinate synthetase family
M478_2641	PF00665	Integrase core domain
M478_2641	PF02796	Helix-turn-helix domain of resolvase
M478_2642	PF01026	TatD related DNase
M478_2643	PF00902	Sec-independent protein translocase protein (TatC)
M478_2645	PF02416	mttA/Hcf106 family
M478_2646	PF03109	M478_2646
M478_2647	PF02036	SCP-2 sterol transfer family
M478_2648	PF01209	ubiE/COQ5 methyltransferase family
M478_2649	PF02646	M478_2649
M478_265	PF06804	NlpB/DapX lipoprotein
M478_2650	PF09335	M478_2650
M478_2651	PF02554	M478_2651
M478_2651	PF13722	M478_2651
M478_2652	PF13350	Tyrosine phosphatase family
M478_2653	PF01048	Phosphorylase superfamily
M478_2654	PF01738	Dienelactone hydrolase family
M478_2655	PF01717	Cobalamin-independent synthase, Catalytic domain
M478_2655	PF08267	Cobalamin-independent synthase, N-terminal domain
M478_2656	PF00892	EamA-like transporter family
M478_2657	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2657	PF03466	LysR substrate binding domain
M478_2658	PF03547	M478_2658
M478_2659	PF03009	Glycerophosphoryl diester phosphodiesterase family
M478_266	PF01797	Transposase IS200 like
M478_2660	PF00005	ABC transporter
M478_2660	PF08402	TOBE domain
M478_2661	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2662	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2663	PF13416	Bacterial extracellular solute-binding protein
M478_2664	PF04449	CS1 type fimbrial major subunit
M478_2665	PF16967	M478_2665
M478_267	PF01259	SAICAR synthetase
M478_2671	PF00005	ABC transporter
M478_2672	PF00005	ABC transporter
M478_2672	PF12399	Branched-chain amino acid ATP-binding cassette transporter
M478_2673	PF02653	M478_2673
M478_2673	PF11862	M478_2673
M478_2674	PF02653	M478_2674
M478_2675	PF13458	Periplasmic binding protein
M478_2676	PF12568	Acetyltransferase (GNAT) domain
M478_2677	PF01797	Transposase IS200 like
M478_2678	PF00140	Sigma-70 factor, region 1
M478_2678	PF04542	Sigma-70 region 2
M478_2678	PF04545	Sigma-70, region 4
M478_2679	PF02687	M478_2679
M478_268	PF04228	M478_268
M478_2680	PF00005	ABC transporter
M478_2681	PF00448	SRP54-type protein, GTPase domain
M478_2681	PF02881	SRP54-type protein, helical bundle domain
M478_2682	PF03602	Conserved hypothetical protein 95
M478_2683	PF06611	M478_2683
M478_2684	PF10694	Protein of unknown function (DUF2500)
M478_2685	PF08850	M478_2685
M478_2686	PF07947	M478_2686
M478_2687	PF00122	E1-E2 ATPase
M478_2687	PF00403	Heavy-metal-associated domain
M478_2687	PF00702	haloacid dehalogenase-like hydrolase
M478_2688	PF01206	Sulfurtransferase TusA
M478_2689	PF02592	M478_2689
M478_269	PF04284	M478_269
M478_2690	PF08786	Domain of unknown function (DUF1795)
M478_2691	PF02754	M478_2691
M478_2692	PF00890	FAD binding domain
M478_2693	PF01266	FAD dependent oxidoreductase
M478_2693	PF04324	BFD-like [2Fe-2S] binding domain
M478_2694	PF03009	Glycerophosphoryl diester phosphodiesterase family
M478_2695	PF03272	M478_2695
M478_2696	PF08282	haloacid dehalogenase-like hydrolase
M478_2697	PF12146	Putative lysophospholipase
M478_2698	PF01810	M478_2698
M478_2699	PF01810	M478_2699
M478_27	PF00905	Penicillin binding protein transpeptidase domain
M478_27	PF03717	Penicillin-binding Protein dimerisation domain
M478_270	PF05127	Helicase
M478_270	PF08351	Domain of unknown function (DUF1726)
M478_270	PF13718	GNAT acetyltransferase 2
M478_270	PF17176	M478_270
M478_2700	PF00270	DEAD/DEAH box helicase
M478_2700	PF00271	Helicase conserved C-terminal domain
M478_2700	PF00570	HRDC domain
M478_2700	PF09382	RQC domain
M478_2700	PF16124	M478_2700
M478_2701	PF02253	Phospholipase A1
M478_2702	PF03061	Thioesterase superfamily
M478_2703	PF00892	EamA-like transporter family
M478_2704	PF01544	CorA-like Mg2+ transporter protein
M478_2705	PF09370	TIM-barrel signal transduction protein
M478_2706	PF06792	Uncharacterised protein family (UPF0261)
M478_2707	PF00440	Bacterial regulatory proteins, tetR family
M478_2708	PF00580	UvrD/REP helicase N-terminal domain
M478_2708	PF13361	UvrD-like helicase C-terminal domain
M478_2709	PF00702	haloacid dehalogenase-like hydrolase
M478_271	PF13980	M478_271
M478_2710	PF00589	Phage integrase family
M478_2710	PF02899	Phage integrase, N-terminal SAM-like domain
M478_2711	PF04340	Protein of unknown function, DUF484
M478_2712	PF01678	Diaminopimelate epimerase
M478_2713	PF13627	M478_2713
M478_2714	PF01491	Frataxin-like domain
M478_2715	PF01295	M478_2715
M478_2715	PF12633	M478_2715
M478_2716	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
M478_2716	PF03900	Porphobilinogen deaminase, C-terminal domain
M478_2717	PF02602	Uroporphyrinogen-III synthase HemD
M478_2718	PF04375	M478_2718
M478_2719	PF07219	M478_2719
M478_272	PF02557	D-alanyl-D-alanine carboxypeptidase
M478_2720	PF01797	Transposase IS200 like
M478_2726	PF00324	Amino acid permease
M478_2727	PF03808	M478_2727
M478_2728	PF06899	M478_2728
M478_2729	PF07429	M478_2729
M478_273	PF01546	Peptidase family M20/M25/M40
M478_273	PF07687	Peptidase dimerisation domain
M478_2730	PF01943	M478_2730
M478_2731	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
M478_2732	PF00583	Acetyltransferase (GNAT) family
M478_2733	PF00483	Nucleotidyl transferase
M478_2734	PF16363	M478_2734
M478_2735	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
M478_2735	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
M478_2735	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
M478_2736	PF02350	UDP-N-acetylglucosamine 2-epimerase
M478_2737	PF02706	Chain length determinant protein
M478_2738	PF00953	Glycosyl transferase family 4
M478_2739	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M478_2739	PF07497	Rho termination factor, RNA-binding domain
M478_2739	PF07498	Rho termination factor, N-terminal domain
M478_274	PF03960	ArsC family
M478_2740	PF00085	Thioredoxin
M478_2741	PF00270	DEAD/DEAH box helicase
M478_2741	PF00271	Helicase conserved C-terminal domain
M478_2742	PF02541	Ppx/GppA phosphatase family
M478_2743	PF02541	Ppx/GppA phosphatase family
M478_2744	PF00580	UvrD/REP helicase N-terminal domain
M478_2744	PF13361	UvrD-like helicase C-terminal domain
M478_2745	PF13616	PPIC-type PPIASE domain
M478_2746	PF05096	Glutamine cyclotransferase
M478_2747	PF00872	M478_2747
M478_2748	PF16970	M478_2748
M478_2749	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_2749	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_275	PF12688	Tetratrico peptide repeat
M478_2750	PF00577	Outer membrane usher protein
M478_2750	PF13953	PapC C-terminal domain
M478_2750	PF13954	PapC N-terminal domain
M478_2751	PF00419	Fimbrial protein
M478_2752	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_2752	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_2753	PF01320	Colicin immunity protein / pyocin immunity protein
M478_2756	PF06958	S-type Pyocin
M478_2758	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
M478_2758	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
M478_2759	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2759	PF03466	LysR substrate binding domain
M478_276	PF13416	Bacterial extracellular solute-binding protein
M478_2763	PF06092	M478_2763
M478_2764	PF06092	M478_2764
M478_2765	PF00291	Pyridoxal-phosphate dependent enzyme
M478_2765	PF00585	C-terminal regulatory domain of Threonine dehydratase
M478_2766	PF00920	Dehydratase family
M478_2767	PF01063	Aminotransferase class IV
M478_2768	PF13710	ACT domain
M478_2769	PF00205	Thiamine pyrophosphate enzyme, central domain
M478_2769	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M478_2769	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
M478_277	PF00528	Binding-protein-dependent transport system inner membrane component
M478_2770	PF01078	Magnesium chelatase, subunit ChlI
M478_2770	PF13335	M478_2770
M478_2770	PF13541	Subunit ChlI of Mg-chelatase
M478_2771	PF04219	M478_2771
M478_2772	PF02653	M478_2772
M478_2773	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2773	PF03466	LysR substrate binding domain
M478_2774	PF02653	M478_2774
M478_2775	PF00005	ABC transporter
M478_2776	PF13407	Periplasmic binding protein domain
M478_278	PF00005	ABC transporter
M478_2783	PF01177	Asp/Glu/Hydantoin racemase
M478_2784	PF00593	TonB dependent receptor
M478_2784	PF07715	TonB-dependent Receptor Plug Domain
M478_2785	PF05958	tRNA (Uracil-5-)-methyltransferase
M478_2786	PF07226	M478_2786
M478_2787	PF00440	Bacterial regulatory proteins, tetR family
M478_2788	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2788	PF03466	LysR substrate binding domain
M478_2789	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
M478_2789	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_279	PF00884	Sulfatase
M478_2790	PF00462	Glutaredoxin
M478_2790	PF08534	Redoxin
M478_2791	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
M478_2791	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_2792	PF03544	Gram-negative bacterial TonB protein C-terminal
M478_2793	PF13437	HlyD family secretion protein
M478_2793	PF13533	Biotin-lipoyl like
M478_2794	PF00005	ABC transporter
M478_2794	PF00664	ABC transporter transmembrane region
M478_2795	PF06438	Heme-binding protein A (HasA)
M478_2796	PF00593	TonB dependent receptor
M478_2796	PF07715	TonB-dependent Receptor Plug Domain
M478_2798	PF00206	Lyase
M478_2798	PF14698	Argininosuccinate lyase C-terminal
M478_2799	PF00696	Amino acid kinase family
M478_28	PF02590	Predicted SPOUT methyltransferase
M478_280	PF04055	Radical SAM superfamily
M478_280	PF13353	4Fe-4S single cluster domain
M478_2800	PF01118	Semialdehyde dehydrogenase, NAD binding domain
M478_2800	PF02774	Semialdehyde dehydrogenase, dimerisation domain
M478_2801	PF01546	Peptidase family M20/M25/M40
M478_2801	PF07687	Peptidase dimerisation domain
M478_2802	PF00311	Phosphoenolpyruvate carboxylase
M478_2803	PF13518	Helix-turn-helix domain
M478_2804	PF00665	Integrase core domain
M478_2804	PF13276	M478_2804
M478_2805	PF02219	Methylenetetrahydrofolate reductase
M478_2806	PF00696	Amino acid kinase family
M478_2806	PF00742	Homoserine dehydrogenase
M478_2806	PF03447	Homoserine dehydrogenase, NAD binding domain
M478_2807	PF01053	Cys/Met metabolism PLP-dependent enzyme
M478_2808	PF01340	Met Apo-repressor, MetJ
M478_2809	PF05360	M478_2809
M478_281	PF04307	M478_281
M478_2810	PF01197	Ribosomal protein L31
M478_2811	PF00270	DEAD/DEAH box helicase
M478_2811	PF00271	Helicase conserved C-terminal domain
M478_2813	PF00356	Bacterial regulatory proteins, lacI family
M478_2813	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
M478_2814	PF05036	Sporulation related domain
M478_2815	PF00227	Proteasome subunit
M478_2816	PF00004	ATPase family associated with various cellular activities (AAA)
M478_2816	PF07724	AAA domain (Cdc48 subfamily)
M478_2816	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_2817	PF01040	UbiA prenyltransferase family
M478_2818	PF03737	Demethylmenaquinone methyltransferase
M478_2819	PF14016	M478_2819
M478_2821	PF13437	HlyD family secretion protein
M478_2822	PF00005	ABC transporter
M478_2822	PF00664	ABC transporter transmembrane region
M478_2822	PF03412	Peptidase C39 family
M478_2823	PF01695	IstB-like ATP binding protein
M478_2824	PF01695	IstB-like ATP binding protein
M478_2828	PF01797	Transposase IS200 like
M478_2829	PF06005	Protein of unknown function (DUF904)
M478_283	PF00873	AcrB/AcrD/AcrF family
M478_2830	PF00230	Major intrinsic protein
M478_2831	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_2831	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_2832	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
M478_2833	PF00175	Oxidoreductase NAD-binding domain
M478_2833	PF00970	Oxidoreductase FAD-binding domain
M478_2834	PF05656	M478_2834
M478_2835	PF07305	M478_2835
M478_2836	PF00121	Triosephosphate isomerase
M478_2837	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2837	PF03466	LysR substrate binding domain
M478_2838	PF02585	GlcNAc-PI de-N-acetylase
M478_2839	PF03737	Demethylmenaquinone methyltransferase
M478_284	PF09904	Winged helix-turn helix
M478_2840	PF00939	Sodium:sulfate symporter transmembrane region
M478_2841	PF13531	Bacterial extracellular solute-binding protein
M478_2842	PF13531	Bacterial extracellular solute-binding protein
M478_2844	PF00365	Phosphofructokinase
M478_2845	PF01545	Cation efflux family
M478_2845	PF16916	M478_2845
M478_2846	PF04754	M478_2846
M478_2847	PF07813	LTXXQ motif family protein
M478_2848	PF00072	Response regulator receiver domain
M478_2848	PF00486	Transcriptional regulatory protein, C terminal
M478_2849	PF00512	His Kinase A (phospho-acceptor) domain
M478_2849	PF00672	HAMP domain
M478_2849	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_2849	PF16527	M478_2849
M478_285	PF00072	Response regulator receiver domain
M478_285	PF00196	Bacterial regulatory proteins, luxR family
M478_2850	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
M478_2850	PF02805	Metal binding domain of Ada
M478_2850	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
M478_2850	PF12833	Helix-turn-helix domain
M478_2851	PF00588	SpoU rRNA Methylase family
M478_2852	PF00132	Bacterial transferase hexapeptide (six repeats)
M478_2852	PF06426	Serine acetyltransferase, N-terminal
M478_2853	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
M478_2853	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
M478_2854	PF02556	Preprotein translocase subunit SecB
M478_2855	PF00462	Glutaredoxin
M478_2856	PF00581	Rhodanese-like domain
M478_2857	PF01676	Metalloenzyme superfamily
M478_2857	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
M478_2858	PF01551	Peptidase family M23
M478_2859	PF04748	Divergent polysaccharide deacetylase
M478_286	PF12838	4Fe-4S dicluster domain
M478_286	PF13187	4Fe-4S dicluster domain
M478_2860	PF04748	Divergent polysaccharide deacetylase
M478_2861	PF00107	Zinc-binding dehydrogenase
M478_2861	PF08240	Alcohol dehydrogenase GroES-like domain
M478_2862	PF00155	Aminotransferase class I and II
M478_2863	PF01370	NAD dependent epimerase/dehydratase family
M478_2864	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
M478_2865	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
M478_2866	PF00534	Glycosyl transferases group 1
M478_2866	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
M478_2867	PF00535	Glycosyl transferase family 2
M478_2868	PF01467	Cytidylyltransferase
M478_2869	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
M478_2869	PF06827	Zinc finger found in FPG and IleRS
M478_2869	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
M478_287	PF03927	NapD protein
M478_2870	PF00471	Ribosomal protein L33
M478_2871	PF00830	Ribosomal L28 family
M478_2872	PF04002	RadC-like JAB domain
M478_2873	PF02441	Flavoprotein
M478_2873	PF04127	DNA / pantothenate metabolism flavoprotein
M478_2874	PF00692	dUTPase
M478_2875	PF00440	Bacterial regulatory proteins, tetR family
M478_2876	PF00156	Phosphoribosyl transferase domain
M478_2877	PF01138	3' exoribonuclease family, domain 1
M478_2877	PF03725	3' exoribonuclease family, domain 2
M478_2878	PF03755	M478_2878
M478_2878	PF08340	M478_2878
M478_2879	PF03458	M478_2879
M478_2880	PF01653	NAD-dependent DNA ligase adenylation domain
M478_2880	PF03120	NAD-dependent DNA ligase OB-fold domain
M478_2881	PF00625	Guanylate kinase
M478_2882	PF01192	RNA polymerase Rpb6
M478_2883	PF02824	TGS domain
M478_2883	PF04607	Region found in RelA / SpoT proteins
M478_2883	PF13291	ACT domain
M478_2883	PF13328	HD domain
M478_2884	PF00588	SpoU rRNA Methylase family
M478_2884	PF12105	SpoU, rRNA methylase, C-terminal
M478_2885	PF00270	DEAD/DEAH box helicase
M478_2885	PF00271	Helicase conserved C-terminal domain
M478_2885	PF17191	M478_2885
M478_2886	PF03616	M478_2886
M478_2887	PF00860	Permease family
M478_2889	PF00583	Acetyltransferase (GNAT) family
M478_2889	PF09500	Putative thioesterase (yiiD_Cterm)
M478_2890	PF00665	Integrase core domain
M478_2890	PF02796	Helix-turn-helix domain of resolvase
M478_2891	PF01695	IstB-like ATP binding protein
M478_2892	PF13409	Glutathione S-transferase, N-terminal domain
M478_2892	PF13410	Glutathione S-transferase, C-terminal domain
M478_2893	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2893	PF03466	LysR substrate binding domain
M478_2894	PF02678	Pirin
M478_2895	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
M478_2896	PF04348	LppC putative lipoprotein
M478_2897	PF02021	Uncharacterised protein family UPF0102
M478_2898	PF13580	SIS domain
M478_2899	PF04972	BON domain
M478_29	PF02410	Oligomerisation domain
M478_290	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
M478_2900	PF00912	Transglycosylase
M478_2902	PF00072	Response regulator receiver domain
M478_2902	PF00512	His Kinase A (phospho-acceptor) domain
M478_2902	PF00989	PAS fold
M478_2902	PF01627	Hpt domain
M478_2902	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_2903	PF04055	Radical SAM superfamily
M478_2903	PF16199	M478_2903
M478_2904	PF00310	Glutamine amidotransferases class-II
M478_2904	PF01493	GXGXG motif
M478_2904	PF01645	Conserved region in glutamate synthase
M478_2904	PF04898	Glutamate synthase central domain
M478_2905	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_2905	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
M478_2907	PF04386	Stringent starvation protein B
M478_2908	PF00043	Glutathione S-transferase, C-terminal domain
M478_2908	PF02798	Glutathione S-transferase, N-terminal domain
M478_2909	PF00380	Ribosomal protein S9/S16
M478_291	PF03264	NapC/NirT cytochrome c family, N-terminal region
M478_2910	PF00572	Ribosomal protein L13
M478_2911	PF03969	AFG1-like ATPase
M478_2912	PF06295	M478_2912
M478_2913	PF00595	PDZ domain (Also known as DHR or GLGF)
M478_2913	PF13180	PDZ domain
M478_2913	PF13365	Trypsin-like peptidase domain
M478_2914	PF01797	Transposase IS200 like
M478_2915	PF13180	PDZ domain
M478_2915	PF13365	Trypsin-like peptidase domain
M478_2916	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
M478_2917	PF01722	BolA-like protein
M478_2918	PF13466	STAS domain
M478_2919	PF05494	Toluene tolerance, Ttg2
M478_292	PF00293	NUDIX domain
M478_2920	PF02470	M478_2920
M478_2921	PF02405	M478_2921
M478_2922	PF00005	ABC transporter
M478_2923	PF01699	Sodium/calcium exchanger protein
M478_2924	PF00571	CBS domain
M478_2924	PF01380	SIS domain
M478_2925	PF08282	haloacid dehalogenase-like hydrolase
M478_2926	PF06835	Lipopolysaccharide-assembly, LptC-related
M478_2927	PF03968	OstA-like protein
M478_2928	PF00005	ABC transporter
M478_2928	PF12399	Branched-chain amino acid ATP-binding cassette transporter
M478_2929	PF00309	M478_2929
M478_2929	PF04552	Sigma-54, DNA binding domain
M478_2929	PF04963	Sigma-54 factor, core binding domain
M478_293	PF00390	Malic enzyme, N-terminal domain
M478_293	PF01515	Phosphate acetyl/butaryl transferase
M478_293	PF03949	Malic enzyme, NAD binding domain
M478_2930	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
M478_2931	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
M478_2932	PF03668	M478_2932
M478_2933	PF00381	PTS HPr component phosphorylation site
M478_2934	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
M478_2934	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
M478_2935	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
M478_2935	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
M478_2936	PF01042	Endoribonuclease L-PSP
M478_2937	PF16743	M478_2937
M478_2938	PF00356	Bacterial regulatory proteins, lacI family
M478_2938	PF13377	Periplasmic binding protein-like domain
M478_2939	PF00367	phosphotransferase system, EIIB
M478_2939	PF02378	Phosphotransferase system, EIIC
M478_294	PF02639	M478_294
M478_2940	PF00128	Alpha amylase, catalytic domain
M478_2940	PF11941	Domain of unknown function (DUF3459)
M478_2941	PF01272	Transcription elongation factor, GreA/GreB, C-term
M478_2941	PF14760	Rnk N-terminus
M478_2942	PF07361	Cytochrome b562
M478_2944	PF01523	Putative modulator of DNA gyrase
M478_2945	PF04751	Protein of unknown function (DUF615)
M478_2946	PF01337	Barstar (barnase inhibitor)
M478_2947	PF00545	ribonuclease
M478_2948	PF00171	Aldehyde dehydrogenase family
M478_2949	PF00171	Aldehyde dehydrogenase family
M478_295	PF01218	Coproporphyrinogen III oxidase
M478_2950	PF04632	M478_2950
M478_2951	PF13437	HlyD family secretion protein
M478_2951	PF13533	Biotin-lipoyl like
M478_2952	PF07869	M478_2952
M478_2953	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2953	PF03466	LysR substrate binding domain
M478_2954	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_2955	PF03538	Salmonella virulence plasmid 28
M478_2957	PF03534	Salmonella virulence plasmid 65kDa B protein
M478_2957	PF12255	Insecticide toxin TcdB middle/C-terminal region
M478_2957	PF12256	Insecticide toxin TcdB middle/N-terminal region
M478_2958	PF16083	M478_2958
M478_2959	PF13539	D-alanyl-D-alanine carboxypeptidase
M478_296	PF00583	Acetyltransferase (GNAT) family
M478_2960	PF10828	M478_2960
M478_2961	PF00782	Dual specificity phosphatase, catalytic domain
M478_2963	PF01523	Putative modulator of DNA gyrase
M478_2964	PF00795	Carbon-nitrogen hydrolase
M478_2965	PF13116	M478_2965
M478_2965	PF13502	M478_2965
M478_2966	PF00575	S1 RNA binding domain
M478_2966	PF10150	Ribonuclease E/G family
M478_2967	PF02545	Maf-like protein
M478_2968	PF04093	M478_2968
M478_2969	PF04085	rod shape-determining protein MreC
M478_2970	PF06723	MreB/Mbl protein
M478_2971	PF00563	EAL domain
M478_2971	PF00990	GGDEF domain
M478_2971	PF17157	M478_2971
M478_2972	PF00107	Zinc-binding dehydrogenase
M478_2972	PF08240	Alcohol dehydrogenase GroES-like domain
M478_2973	PF00174	Oxidoreductase molybdopterin binding domain
M478_2974	PF01794	M478_2974
M478_2975	PF01220	Dehydroquinase class II
M478_2976	PF00364	Biotin-requiring enzyme
M478_2977	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
M478_2977	PF02785	Biotin carboxylase C-terminal domain
M478_2977	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
M478_2979	PF06196	M478_2979
M478_2980	PF00474	Sodium:solute symporter family
M478_2981	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
M478_2982	PF01207	Dihydrouridine synthase (Dus)
M478_2983	PF02954	Bacterial regulatory protein, Fis family
M478_2985	PF00392	Bacterial regulatory proteins, gntR family
M478_2985	PF07729	FCD domain
M478_2986	PF07690	Major Facilitator Superfamily
M478_2987	PF02627	Carboxymuconolactone decarboxylase family
M478_2988	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
M478_2988	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
M478_2989	PF00753	Metallo-beta-lactamase superfamily
M478_299	PF03212	Pertactin
M478_299	PF03797	Autotransporter beta-domain
M478_2990	PF05433	M478_2990
M478_2991	PF00313	'Cold-shock' DNA-binding domain
M478_2992	PF00313	'Cold-shock' DNA-binding domain
M478_2993	PF01797	Transposase IS200 like
M478_2995	PF13449	Esterase-like activity of phytase
M478_2996	PF02798	Glutathione S-transferase, N-terminal domain
M478_2996	PF13410	Glutathione S-transferase, C-terminal domain
M478_2997	PF01380	SIS domain
M478_2998	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_2998	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_2999	PF02653	M478_2999
M478_3	PF13407	Periplasmic binding protein domain
M478_30	PF01467	Cytidylyltransferase
M478_300	PF04076	Bacterial OB fold (BOF) protein
M478_3000	PF02653	M478_3000
M478_3001	PF00005	ABC transporter
M478_3002	PF13407	Periplasmic binding protein domain
M478_3003	PF03279	M478_3003
M478_3005	PF00999	Sodium/hydrogen exchanger family
M478_3006	PF00860	Permease family
M478_3007	PF04221	RelB antitoxin
M478_3008	PF00005	ABC transporter
M478_3009	PF00528	Binding-protein-dependent transport system inner membrane component
M478_301	PF06572	Protein of unknown function (DUF1131)
M478_3010	PF00296	Luciferase-like monooxygenase
M478_3011	PF09084	NMT1/THI5 like
M478_3012	PF03358	NADPH-dependent FMN reductase
M478_3013	PF01791	DeoC/LacD family aldolase
M478_3014	PF00294	pfkB family carbohydrate kinase
M478_3015	PF05025	RbsD / FucU transport protein family
M478_3016	PF02311	AraC-like ligand binding domain
M478_3016	PF12833	Helix-turn-helix domain
M478_3017	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_3018	PF01261	Xylose isomerase-like TIM barrel
M478_302	PF04261	Dyp-type peroxidase family
M478_3020	PF03527	M478_3020
M478_3020	PF05488	PAAR motif
M478_3020	PF05593	M478_3020
M478_3021	PF08786	Domain of unknown function (DUF1795)
M478_3022	PF05954	Phage late control gene D protein (GPD)
M478_3023	PF12486	M478_3023
M478_3024	PF01381	Helix-turn-helix
M478_3025	PF08845	M478_3025
M478_3027	PF09346	SMI1 / KNR4 family (SUKH-1)
M478_3028	PF03527	M478_3028
M478_3028	PF14414	M478_3028
M478_3029	PF05488	PAAR motif
M478_3029	PF05593	M478_3029
M478_303	PF00701	Dihydrodipicolinate synthetase family
M478_3030	PF08786	Domain of unknown function (DUF1795)
M478_3031	PF05954	Phage late control gene D protein (GPD)
M478_3032	PF12486	M478_3032
M478_3033	PF06812	M478_3033
M478_3036	PF06812	M478_3036
M478_3036	PF16989	M478_3036
M478_3037	PF11319	M478_3037
M478_3038	PF02954	Bacterial regulatory protein, Fis family
M478_3039	PF00004	ATPase family associated with various cellular activities (AAA)
M478_3039	PF07724	AAA domain (Cdc48 subfamily)
M478_3039	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_304	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
M478_3040	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
M478_3041	PF05936	M478_3041
M478_3042	PF12790	Type VI secretion lipoprotein
M478_3044	PF06996	M478_3044
M478_3045	PF05947	M478_3045
M478_3046	PF13518	Helix-turn-helix domain
M478_3047	PF00665	Integrase core domain
M478_3047	PF02796	Helix-turn-helix domain of resolvase
M478_3049	PF01695	IstB-like ATP binding protein
M478_305	PF12468	Type III secretion system leucine rich repeat protein
M478_305	PF13855	Leucine rich repeat
M478_3050	PF05947	M478_3050
M478_3051	PF04965	Gene 25-like lysozyme
M478_3052	PF05943	M478_3052
M478_3053	PF05591	M478_3053
M478_3054	PF05638	Protein of unknown function (DUF796)
M478_3056	PF07148	M478_3056
M478_3057	PF02264	LamB porin
M478_3058	PF00005	ABC transporter
M478_3058	PF08402	TOBE domain
M478_306	PF00480	ROK family
M478_3060	PF13416	Bacterial extracellular solute-binding protein
M478_3061	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3061	PF14785	Maltose transport system permease protein MalF P2 domain
M478_3062	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3063	PF06146	M478_3063
M478_3064	PF00342	Phosphoglucose isomerase
M478_3065	PF00696	Amino acid kinase family
M478_3067	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
M478_3067	PF08479	POTRA domain, ShlB-type
M478_3067	PF17287	M478_3067
M478_3068	PF05860	haemagglutination activity domain
M478_3068	PF13332	M478_3068
M478_3069	PF00809	Pterin binding enzyme
M478_3069	PF02310	B12 binding domain
M478_3069	PF02574	Homocysteine S-methyltransferase
M478_3069	PF02607	B12 binding domain
M478_3069	PF02965	Vitamin B12 dependent methionine synthase, activation domain
M478_307	PF04074	Domain of unknown function (DUF386)
M478_3070	PF09339	IclR helix-turn-helix domain
M478_3071	PF01614	Bacterial transcriptional regulator
M478_3072	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
M478_3073	PF00463	Isocitrate lyase family
M478_3074	PF01274	Malate synthase
M478_3075	PF04204	Homoserine O-succinyltransferase
M478_308	PF01380	SIS domain
M478_308	PF01418	Helix-turn-helix domain, rpiR family
M478_3084	PF00392	Bacterial regulatory proteins, gntR family
M478_3084	PF07729	FCD domain
M478_3086	PF07690	Major Facilitator Superfamily
M478_3087	PF00294	pfkB family carbohydrate kinase
M478_3088	PF05025	RbsD / FucU transport protein family
M478_3089	PF02705	M478_3089
M478_309	PF07690	Major Facilitator Superfamily
M478_3090	PF07728	AAA domain (dynein-related subfamily)
M478_3090	PF12592	Protein of unknown function (DUF3763)
M478_3091	PF05762	VWA domain containing CoxE-like protein
M478_3092	PF03590	Aspartate-ammonia ligase
M478_3093	PF01037	AsnC family
M478_3093	PF13412	Winged helix-turn-helix DNA-binding
M478_3094	PF00258	Flavodoxin
M478_3095	PF01134	Glucose inhibited division protein A
M478_3095	PF13932	GidA associated domain 3
M478_3096	PF02527	rRNA small subunit methyltransferase G
M478_3097	PF03899	M478_3097
M478_3098	PF00119	ATP synthase A chain
M478_3099	PF00137	ATP synthase subunit C
M478_31	PF06144	DNA polymerase III, delta subunit
M478_31	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
M478_310	PF13531	Bacterial extracellular solute-binding protein
M478_3100	PF00430	ATP synthase B/B' CF(0)
M478_3101	PF00213	ATP synthase delta (OSCP) subunit
M478_3102	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M478_3102	PF00306	ATP synthase alpha/beta chain, C terminal domain
M478_3102	PF02874	ATP synthase alpha/beta family, beta-barrel domain
M478_3103	PF00231	ATP synthase
M478_3104	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M478_3104	PF02874	ATP synthase alpha/beta family, beta-barrel domain
M478_3105	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
M478_3105	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
M478_3106	PF00132	Bacterial transferase hexapeptide (six repeats)
M478_3106	PF12804	MobA-like NTP transferase domain
M478_3107	PF01380	SIS domain
M478_3107	PF13522	Glutamine amidotransferase domain
M478_3108	PF12849	PBP superfamily domain
M478_3109	PF00528	Binding-protein-dependent transport system inner membrane component
M478_311	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3110	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3111	PF00005	ABC transporter
M478_3112	PF01895	PhoU domain
M478_3113	PF04519	M478_3113
M478_3114	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_3115	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3116	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3117	PF13419	Haloacid dehalogenase-like hydrolase
M478_3118	PF00860	Permease family
M478_312	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3121	PF07055	Enoyl reductase FAD binding domain
M478_3121	PF12241	Trans-2-enoyl-CoA reductase catalytic region
M478_3121	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
M478_3122	PF01926	50S ribosome-binding GTPase
M478_3122	PF10396	GTP-binding protein TrmE N-terminus
M478_3122	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
M478_3123	PF02096	60Kd inner membrane protein
M478_3123	PF14849	YidC periplasmic domain
M478_3124	PF01809	M478_3124
M478_3125	PF00825	Ribonuclease P
M478_3126	PF00468	Ribosomal protein L34
M478_3128	PF00308	Bacterial dnaA  protein
M478_3128	PF08299	Bacterial dnaA protein helix-turn-helix
M478_3128	PF11638	DnaA N-terminal domain
M478_3129	PF00712	DNA polymerase III beta subunit, N-terminal domain
M478_3129	PF02767	DNA polymerase III beta subunit, central domain
M478_3129	PF02768	DNA polymerase III beta subunit, C-terminal domain
M478_313	PF00005	ABC transporter
M478_3130	PF02463	RecF/RecN/SMC N terminal domain
M478_3131	PF00204	DNA gyrase B
M478_3131	PF00986	DNA gyrase B subunit, carboxyl terminus
M478_3131	PF01751	Toprim domain
M478_3131	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3132	PF08282	haloacid dehalogenase-like hydrolase
M478_3133	PF00665	Integrase core domain
M478_3133	PF13276	M478_3133
M478_3135	PF13518	Helix-turn-helix domain
M478_3136	PF02423	Ornithine cyclodeaminase/mu-crystallin family
M478_3137	PF00291	Pyridoxal-phosphate dependent enzyme
M478_3139	PF07676	WD40-like Beta Propeller Repeat
M478_314	PF00291	Pyridoxal-phosphate dependent enzyme
M478_3140	PF07119	M478_3140
M478_3141	PF00011	Hsp20/alpha crystallin family
M478_3142	PF00011	Hsp20/alpha crystallin family
M478_3143	PF02080	TrkA-C domain
M478_3143	PF06826	M478_3143
M478_3144	PF00155	Aminotransferase class I and II
M478_3146	PF00128	Alpha amylase, catalytic domain
M478_3147	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
M478_3147	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
M478_3149	PF00691	OmpA family
M478_3149	PF13488	M478_3149
M478_3150	PF13673	Acetyltransferase (GNAT) domain
M478_3151	PF03352	Methyladenine glycosylase
M478_3153	PF02091	Glycyl-tRNA synthetase alpha subunit
M478_3154	PF02092	M478_3154
M478_3154	PF05746	DALR anticodon binding domain
M478_3155	PF11254	M478_3155
M478_3156	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
M478_3156	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
M478_3156	PF02378	Phosphotransferase system, EIIC
M478_3157	PF01232	Mannitol dehydrogenase Rossmann domain
M478_3157	PF08125	Mannitol dehydrogenase C-terminal domain
M478_3158	PF05068	Mannitol repressor
M478_316	PF00072	Response regulator receiver domain
M478_316	PF00486	Transcriptional regulatory protein, C terminal
M478_3160	PF10928	Protein of unknown function (DUF2810)
M478_3161	PF10517	M478_3161
M478_3164	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_3164	PF00672	HAMP domain
M478_3164	PF16591	M478_3164
M478_3165	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
M478_3165	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
M478_3166	PF02634	FdhD/NarQ family
M478_3167	PF00384	Molybdopterin oxidoreductase
M478_3167	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
M478_3168	PF00384	Molybdopterin oxidoreductase
M478_3168	PF01568	Molydopterin dinucleotide binding domain
M478_3169	PF09163	Formate dehydrogenase N, transmembrane
M478_3169	PF13247	4Fe-4S dicluster domain
M478_317	PF00512	His Kinase A (phospho-acceptor) domain
M478_317	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3170	PF01292	Prokaryotic cytochrome b561
M478_3171	PF04216	Protein involved in formate dehydrogenase formation
M478_3172	PF03841	L-seryl-tRNA selenium transferase
M478_3172	PF12390	M478_3172
M478_3173	PF00009	Elongation factor Tu GTP binding domain
M478_3173	PF09106	Elongation factor SelB, winged helix
M478_3173	PF09107	Elongation factor SelB, winged helix
M478_3174	PF01526	M478_3174
M478_3176	PF13988	M478_3176
M478_3179	PF07690	Major Facilitator Superfamily
M478_318	PF00092	von Willebrand factor type A domain
M478_3180	PF00665	Integrase core domain
M478_3180	PF13276	M478_3180
M478_3181	PF13518	Helix-turn-helix domain
M478_3182	PF01757	M478_3182
M478_3183	PF00419	Fimbrial protein
M478_3184	PF00577	Outer membrane usher protein
M478_3184	PF13954	PapC N-terminal domain
M478_3185	PF00577	Outer membrane usher protein
M478_3185	PF13953	PapC C-terminal domain
M478_3186	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_3186	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_3187	PF00419	Fimbrial protein
M478_3188	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_3188	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_319	PF00155	Aminotransferase class I and II
M478_3190	PF13407	Periplasmic binding protein domain
M478_3191	PF00005	ABC transporter
M478_3192	PF02653	M478_3192
M478_3193	PF12833	Helix-turn-helix domain
M478_3193	PF13377	Periplasmic binding protein-like domain
M478_3195	PF00589	Phage integrase family
M478_3195	PF13356	Domain of unknown function (DUF4102)
M478_3197	PF04606	M478_3197
M478_3199	PF01609	Transposase DDE domain
M478_32	PF04390	Lipopolysaccharide-assembly
M478_320	PF01321	Creatinase/Prolidase N-terminal domain
M478_3200	PF01381	Helix-turn-helix
M478_3202	PF00005	ABC transporter
M478_3203	PF13310	M478_3203
M478_3204	PF01032	FecCD transport family
M478_3205	PF01032	FecCD transport family
M478_3206	PF01497	Periplasmic binding protein
M478_3207	PF13535	ATP-grasp domain
M478_3208	PF00892	EamA-like transporter family
M478_3209	PF00156	Phosphoribosyl transferase domain
M478_321	PF00557	Metallopeptidase family M24
M478_321	PF01321	Creatinase/Prolidase N-terminal domain
M478_3210	PF00291	Pyridoxal-phosphate dependent enzyme
M478_3211	PF01175	Urocanase
M478_3211	PF17391	M478_3211
M478_3211	PF17392	M478_3211
M478_3212	PF00221	Aromatic amino acid lyase
M478_3213	PF00324	Amino acid permease
M478_3214	PF12146	Putative lysophospholipase
M478_3215	PF00884	Sulfatase
M478_3215	PF08019	M478_3215
M478_3216	PF00072	Response regulator receiver domain
M478_3216	PF00196	Bacterial regulatory proteins, luxR family
M478_3217	PF05231	M478_3217
M478_3218	PF00665	Integrase core domain
M478_3218	PF02796	Helix-turn-helix domain of resolvase
M478_3219	PF01695	IstB-like ATP binding protein
M478_322	PF11755	M478_322
M478_3220	PF00132	Bacterial transferase hexapeptide (six repeats)
M478_3221	PF01488	Shikimate / quinate 5-dehydrogenase
M478_3221	PF08501	Shikimate dehydrogenase substrate binding domain
M478_3222	PF01300	Telomere recombination
M478_3223	PF01396	M478_3223
M478_3224	PF04361	M478_3224
M478_3225	PF02481	DNA recombination-mediator protein A
M478_3226	PF01327	Polypeptide deformylase
M478_3227	PF00551	Formyl transferase
M478_3227	PF02911	Formyl transferase, C-terminal domain
M478_3228	PF01029	NusB family
M478_3228	PF01189	NOL1/NOP2/sun family
M478_3229	PF02080	TrkA-C domain
M478_3229	PF02254	TrkA-N domain
M478_3230	PF01741	Large-conductance mechanosensitive channel, MscL
M478_3231	PF03889	M478_3231
M478_3232	PF13411	MerR HTH family regulatory protein
M478_3233	PF01196	Ribosomal protein L17
M478_3234	PF01000	RNA polymerase Rpb3/RpoA insert domain
M478_3234	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
M478_3234	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
M478_3235	PF00163	Ribosomal protein S4/S9 N-terminal domain
M478_3235	PF01479	S4 domain
M478_3236	PF00411	Ribosomal protein S11
M478_3237	PF00416	Ribosomal protein S13/S18
M478_3238	PF00444	Ribosomal protein L36
M478_3239	PF00344	SecY translocase
M478_324	PF00581	Rhodanese-like domain
M478_324	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
M478_324	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_3240	PF00828	Ribosomal protein L18e/L15
M478_3241	PF00327	Ribosomal protein L30p/L7e
M478_3242	PF00333	Ribosomal protein S5, N-terminal domain
M478_3242	PF03719	Ribosomal protein S5, C-terminal domain
M478_3243	PF00861	Ribosomal L18p/L5e family
M478_3244	PF00347	Ribosomal protein L6
M478_3245	PF00410	Ribosomal protein S8
M478_3246	PF00253	Ribosomal protein S14p/S29e
M478_3247	PF00281	Ribosomal protein L5
M478_3247	PF00673	ribosomal L5P family C-terminus
M478_3248	PF00467	KOW motif
M478_3248	PF17136	M478_3248
M478_3249	PF00238	Ribosomal protein L14p/L23e
M478_325	PF00005	ABC transporter
M478_325	PF02687	M478_325
M478_325	PF12704	MacB-like periplasmic core domain
M478_3250	PF00366	Ribosomal protein S17
M478_3251	PF00831	Ribosomal L29 protein
M478_3252	PF00252	Ribosomal protein L16p/L10e
M478_3253	PF00189	Ribosomal protein S3, C-terminal domain
M478_3253	PF07650	KH domain
M478_3254	PF00237	Ribosomal protein L22p/L17e
M478_3255	PF00203	Ribosomal protein S19
M478_3256	PF00181	Ribosomal Proteins L2, RNA binding domain
M478_3256	PF03947	Ribosomal Proteins L2, C-terminal domain
M478_3257	PF00276	Ribosomal protein L23
M478_3258	PF00573	Ribosomal protein L4/L1 family
M478_3259	PF00297	Ribosomal protein L3
M478_326	PF16576	M478_326
M478_3260	PF00338	Ribosomal protein S10p/S20e
M478_3261	PF00210	Ferritin-like domain
M478_3262	PF04324	BFD-like [2Fe-2S] binding domain
M478_3263	PF01797	Transposase IS200 like
M478_3264	PF00009	Elongation factor Tu GTP binding domain
M478_3264	PF03143	Elongation factor Tu C-terminal domain
M478_3264	PF03144	Elongation factor Tu domain 2
M478_3265	PF00009	Elongation factor Tu GTP binding domain
M478_3265	PF00679	Elongation factor G C-terminus
M478_3265	PF03144	Elongation factor Tu domain 2
M478_3265	PF03764	Elongation factor G, domain IV
M478_3265	PF14492	Elongation Factor G, domain II
M478_3266	PF00177	Ribosomal protein S7p/S5e
M478_3267	PF00164	Ribosomal protein S12/S23
M478_3268	PF04077	DsrH like protein
M478_3269	PF02635	DsrE/DsrF-like family
M478_327	PF00072	Response regulator receiver domain
M478_327	PF00486	Transcriptional regulatory protein, C terminal
M478_3270	PF02635	DsrE/DsrF-like family
M478_3271	PF08348	M478_3271
M478_3271	PF13309	M478_3271
M478_3272	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
M478_3272	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
M478_3273	PF04102	SlyX
M478_3274	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
M478_3275	PF09526	M478_3275
M478_3276	PF00999	Sodium/hydrogen exchanger family
M478_3276	PF02254	TrkA-N domain
M478_3277	PF02525	Flavodoxin-like fold
M478_3278	PF00005	ABC transporter
M478_3279	PF00005	ABC transporter
M478_3279	PF12848	ABC transporter
M478_328	PF00512	His Kinase A (phospho-acceptor) domain
M478_328	PF00672	HAMP domain
M478_328	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3280	PF00535	Glycosyl transferase family 2
M478_3281	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
M478_3282	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
M478_3283	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3284	PF00005	ABC transporter
M478_3285	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
M478_3286	PF01810	M478_3286
M478_3287	PF00561	alpha/beta hydrolase fold
M478_3288	PF06794	Uncharacterised protein family (UPF0270)
M478_3289	PF00485	Phosphoribulokinase / Uridine kinase family
M478_3290	PF06836	M478_3290
M478_3291	PF02566	OsmC-like protein
M478_3292	PF00027	Cyclic nucleotide-binding domain
M478_3292	PF00325	Bacterial regulatory proteins, crp family
M478_3293	PF12805	M478_3293
M478_3293	PF13515	M478_3293
M478_3294	PF00202	Aminotransferase class-III
M478_3295	PF00117	Glutamine amidotransferase class-I
M478_3296	PF05872	M478_3296
M478_3297	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
M478_3298	PF02056	Family 4 glycosyl hydrolase
M478_3298	PF11975	Family 4 glycosyl hydrolase C-terminal domain
M478_3299	PF00356	Bacterial regulatory proteins, lacI family
M478_3299	PF13377	Periplasmic binding protein-like domain
M478_33	PF00133	tRNA synthetases class I (I, L, M and V)
M478_33	PF08264	Anticodon-binding domain of tRNA
M478_33	PF13603	Leucyl-tRNA synthetase, Domain 2
M478_330	PF01797	Transposase IS200 like
M478_3300	PF00593	TonB dependent receptor
M478_3300	PF07715	TonB-dependent Receptor Plug Domain
M478_3301	PF07690	Major Facilitator Superfamily
M478_3302	PF07969	Amidohydrolase family
M478_3303	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
M478_3303	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
M478_3303	PF04324	BFD-like [2Fe-2S] binding domain
M478_3303	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_3304	PF13806	Rieske-like [2Fe-2S] domain
M478_3305	PF01226	Formate/nitrite transporter
M478_3306	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
M478_3306	PF10414	Sirohaem synthase dimerisation region
M478_3306	PF13241	Putative NAD(P)-binding
M478_3306	PF14824	Sirohaem biosynthesis protein central
M478_3307	PF00579	tRNA synthetases class I (W and Y)
M478_3308	PF13419	Haloacid dehalogenase-like hydrolase
M478_3309	PF00834	Ribulose-phosphate 3 epimerase family
M478_331	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
M478_3310	PF02086	D12 class N6 adenine-specific DNA methyltransferase
M478_3311	PF05036	Sporulation related domain
M478_3312	PF01761	3-dehydroquinate synthase
M478_3313	PF01202	Shikimate kinase
M478_3314	PF00263	M478_3314
M478_3314	PF03958	Bacterial type II/III secretion system short domain
M478_3315	PF10748	M478_3315
M478_3317	PF05137	M478_3317
M478_3318	PF11104	Type IV pilus assembly protein PilM;
M478_3319	PF00905	Penicillin binding protein transpeptidase domain
M478_3319	PF00912	Transglycosylase
M478_3319	PF17092	M478_3319
M478_332	PF00391	PEP-utilising enzyme, mobile domain
M478_332	PF02896	PEP-utilising enzyme, TIM barrel domain
M478_332	PF05524	PEP-utilising enzyme, N-terminal
M478_3320	PF00293	NUDIX domain
M478_3322	PF07095	Intracellular growth attenuator protein IgaA
M478_3323	PF13419	Haloacid dehalogenase-like hydrolase
M478_3324	PF01479	S4 domain
M478_3325	PF01430	Hsp33 protein
M478_3326	PF01293	Phosphoenolpyruvate carboxykinase
M478_3327	PF00512	His Kinase A (phospho-acceptor) domain
M478_3327	PF00672	HAMP domain
M478_3327	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3328	PF00072	Response regulator receiver domain
M478_3328	PF00486	Transcriptional regulatory protein, C terminal
M478_3329	PF01272	Transcription elongation factor, GreA/GreB, C-term
M478_3329	PF03449	Transcription elongation factor, N-terminal
M478_333	PF00381	PTS HPr component phosphorylation site
M478_3330	PF00575	S1 RNA binding domain
M478_3330	PF09371	Tex-like protein N-terminal domain
M478_3330	PF12836	Helix-hairpin-helix motif
M478_3330	PF16921	M478_3330
M478_3331	PF04023	FeoA domain
M478_3332	PF02421	Ferrous iron transport protein B
M478_3332	PF07664	M478_3332
M478_3332	PF07670	Nucleoside recognition
M478_3333	PF09012	FeoC like transcriptional regulator
M478_3334	PF07338	Protein of unknown function (DUF1471)
M478_3335	PF00561	alpha/beta hydrolase fold
M478_3336	PF00156	Phosphoribosyl transferase domain
M478_3337	PF01106	NifU-like domain
M478_3337	PF01521	Iron-sulphur cluster biosynthesis
M478_3338	PF02446	4-alpha-glucanotransferase
M478_3339	PF00343	Carbohydrate phosphorylase
M478_334	PF00291	Pyridoxal-phosphate dependent enzyme
M478_3341	PF00196	Bacterial regulatory proteins, luxR family
M478_3342	PF00581	Rhodanese-like domain
M478_3343	PF01694	Rhomboid family
M478_3343	PF12122	Protein of unknown function (DUF3582)
M478_3344	PF00455	M478_3344
M478_3344	PF08220	DeoR-like helix-turn-helix domain
M478_3345	PF13518	Helix-turn-helix domain
M478_3346	PF00665	Integrase core domain
M478_3346	PF13276	M478_3346
M478_3347	PF06092	M478_3347
M478_3349	PF01266	FAD dependent oxidoreductase
M478_3349	PF16901	M478_3349
M478_335	PF07264	Etoposide-induced protein 2
M478_3350	PF00343	Carbohydrate phosphorylase
M478_3351	PF00534	Glycosyl transferases group 1
M478_3351	PF08323	Starch synthase catalytic domain
M478_3352	PF00483	Nucleotidyl transferase
M478_3353	PF00128	Alpha amylase, catalytic domain
M478_3353	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
M478_3354	PF00128	Alpha amylase, catalytic domain
M478_3354	PF02806	Alpha amylase, C-terminal all-beta domain
M478_3354	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
M478_3355	PF06580	M478_3355
M478_3355	PF07694	5TMR of 5TMR-LYT
M478_3356	PF01476	LysM domain
M478_3356	PF02369	Bacterial Ig-like domain (group 1)
M478_3356	PF11924	Protein of unknown function (DUF3442)
M478_336	PF04354	ZipA, C-terminal FtsZ-binding domain
M478_3361	PF01118	Semialdehyde dehydrogenase, NAD binding domain
M478_3361	PF02774	Semialdehyde dehydrogenase, dimerisation domain
M478_3362	PF01914	M478_3362
M478_3366	PF01202	Shikimate kinase
M478_3367	PF02447	M478_3367
M478_3368	PF00356	Bacterial regulatory proteins, lacI family
M478_3368	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
M478_3369	PF02678	Pirin
M478_337	PF00533	BRCA1 C Terminus (BRCT) domain
M478_337	PF01653	NAD-dependent DNA ligase adenylation domain
M478_337	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
M478_337	PF03120	NAD-dependent DNA ligase OB-fold domain
M478_337	PF12826	Helix-hairpin-helix motif
M478_337	PF14520	Helix-hairpin-helix domain
M478_3371	PF00072	Response regulator receiver domain
M478_3371	PF00486	Transcriptional regulatory protein, C terminal
M478_3372	PF00294	pfkB family carbohydrate kinase
M478_3373	PF01116	Fructose-bisphosphate aldolase class-II
M478_3374	PF07385	Protein of unknown function (DUF1498)
M478_3375	PF13407	Periplasmic binding protein domain
M478_3376	PF02653	M478_3376
M478_3377	PF00005	ABC transporter
M478_3378	PF00072	Response regulator receiver domain
M478_3378	PF00512	His Kinase A (phospho-acceptor) domain
M478_3378	PF00672	HAMP domain
M478_3378	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3378	PF12860	M478_3378
M478_3379	PF03486	HI0933-like protein
M478_338	PF12843	M478_338
M478_3380	PF01384	M478_3380
M478_3381	PF01797	Transposase IS200 like
M478_3382	PF10625	M478_3382
M478_3383	PF00582	Universal stress protein family
M478_3384	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
M478_3384	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
M478_3385	PF08548	Peptidase M10 serralysin C terminal
M478_3386	PF04445	Putative SAM-dependent methyltransferase
M478_3387	PF01432	Peptidase family M3
M478_3388	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
M478_3389	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
M478_3389	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_339	PF14282	M478_339
M478_3390	PF05651	M478_3390
M478_3390	PF13556	PucR C-terminal helix-turn-helix domain
M478_3391	PF02447	M478_3391
M478_3392	PF02595	Glycerate kinase family
M478_3393	PF06092	M478_3393
M478_3394	PF06092	M478_3394
M478_3395	PF11692	M478_3395
M478_3396	PF03212	Pertactin
M478_3396	PF03797	Autotransporter beta-domain
M478_3397	PF03631	M478_3397
M478_3398	PF05170	M478_3398
M478_3399	PF02611	CDP-diacylglycerol pyrophosphatase
M478_34	PF07295	M478_34
M478_340	PF06042	Bacterial protein of unknown function (DUF925)
M478_3400	PF00563	EAL domain
M478_3401	PF01361	Tautomerase enzyme
M478_3402	PF00294	pfkB family carbohydrate kinase
M478_3403	PF00675	Insulinase (Peptidase family M16)
M478_3403	PF05193	Peptidase M16 inactive domain
M478_3405	PF00375	Sodium:dicarboxylate symporter family
M478_3406	PF00754	F5/8 type C domain
M478_3407	PF06917	Periplasmic pectate lyase
M478_3408	PF06178	Oligogalacturonate-specific porin protein (KdgM)
M478_3409	PF00563	EAL domain
M478_3409	PF00990	GGDEF domain
M478_3409	PF17154	M478_3409
M478_3410	PF01270	Glycosyl hydrolases family 8
M478_3411	PF00005	ABC transporter
M478_3411	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
M478_3412	PF00005	ABC transporter
M478_3412	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
M478_3413	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3413	PF12911	M478_3413
M478_3414	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3415	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_3417	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
M478_3417	PF08479	POTRA domain, ShlB-type
M478_3417	PF17287	M478_3417
M478_3418	PF05860	haemagglutination activity domain
M478_3421	PF07690	Major Facilitator Superfamily
M478_3422	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3422	PF07730	Histidine kinase
M478_3423	PF01695	IstB-like ATP binding protein
M478_3427	PF12715	Abhydrolase family
M478_3428	PF00474	Sodium:solute symporter family
M478_3429	PF04341	M478_3429
M478_3430	PF00501	AMP-binding enzyme
M478_3430	PF13193	AMP-binding enzyme C-terminal domain
M478_3430	PF16177	M478_3430
M478_3431	PF00375	Sodium:dicarboxylate symporter family
M478_3432	PF00072	Response regulator receiver domain
M478_3432	PF00196	Bacterial regulatory proteins, luxR family
M478_3433	PF00072	Response regulator receiver domain
M478_3433	PF00512	His Kinase A (phospho-acceptor) domain
M478_3433	PF01627	Hpt domain
M478_3433	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3434	PF00263	M478_3434
M478_3434	PF03958	Bacterial type II/III secretion system short domain
M478_3435	PF16693	M478_3435
M478_3436	PF08988	Protein of unknown function (DUF1895)
M478_3437	PF12833	Helix-turn-helix domain
M478_3438	PF09392	Type III secretion needle MxiH like
M478_3439	PF06287	M478_3439
M478_344	PF01797	Transposase IS200 like
M478_3443	PF13327	M478_3443
M478_3444	PF06188	M478_3444
M478_3445	PF00771	FHIPEP family
M478_3446	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M478_3446	PF02874	ATP synthase alpha/beta family, beta-barrel domain
M478_3449	PF01052	Surface presentation of antigens (SPOA)
M478_345	PF00749	tRNA synthetases class I (E and Q), catalytic domain
M478_3450	PF00813	M478_3450
M478_3451	PF01313	M478_3451
M478_3452	PF01311	M478_3452
M478_3453	PF01312	FlhB HrpN YscU SpaS Family
M478_3454	PF04143	M478_3454
M478_3455	PF01206	Sulfurtransferase TusA
M478_3456	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_3456	PF03466	LysR substrate binding domain
M478_3458	PF01053	Cys/Met metabolism PLP-dependent enzyme
M478_3459	PF00005	ABC transporter
M478_3460	PF01032	FecCD transport family
M478_3461	PF01497	Periplasmic binding protein
M478_3462	PF05171	Haemin-degrading HemS
M478_3463	PF00593	TonB dependent receptor
M478_3463	PF07715	TonB-dependent Receptor Plug Domain
M478_3464	PF13460	NADH(P)-binding
M478_3465	PF06228	Haem utilisation ChuX/HutX
M478_3466	PF04055	Radical SAM superfamily
M478_3467	PF02219	Methylenetetrahydrofolate reductase
M478_3469	PF15617	M478_3469
M478_3470	PF11202	M478_3470
M478_3470	PF15608	M478_3470
M478_3472	PF12500	M478_3472
M478_3472	PF15609	M478_3472
M478_3473	PF15632	M478_3473
M478_3474	PF02342	TerD domain
M478_3475	PF02342	TerD domain
M478_3476	PF05099	Tellurite resistance protein TerB
M478_3477	PF03741	M478_3477
M478_3478	PF02342	TerD domain
M478_3479	PF02342	TerD domain
M478_3480	PF06551	M478_3480
M478_3481	PF00577	Outer membrane usher protein
M478_3481	PF13953	PapC C-terminal domain
M478_3481	PF13954	PapC N-terminal domain
M478_3482	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_3485	PF01565	FAD binding domain
M478_3485	PF08031	Berberine and berberine like
M478_3486	PF03797	Autotransporter beta-domain
M478_3487	PF04345	Chorismate lyase
M478_3488	PF01040	UbiA prenyltransferase family
M478_3489	PF01553	Acyltransferase
M478_349	PF01773	Na+ dependent nucleoside transporter N-terminus
M478_349	PF07662	Na+ dependent nucleoside transporter C-terminus
M478_349	PF07670	Nucleoside recognition
M478_3490	PF01219	Prokaryotic diacylglycerol kinase
M478_3491	PF00717	Peptidase S24-like
M478_3491	PF01726	LexA DNA binding domain
M478_3492	PF01475	Ferric uptake regulator family
M478_3493	PF01207	Dihydrouridine synthase (Dus)
M478_3494	PF09583	M478_3494
M478_3495	PF00107	Zinc-binding dehydrogenase
M478_3495	PF08240	Alcohol dehydrogenase GroES-like domain
M478_3496	PF00772	DnaB-like helicase N terminal domain
M478_3496	PF03796	DnaB-like helicase C terminal domain
M478_3497	PF00842	Alanine racemase, C-terminal domain
M478_3497	PF01168	Alanine racemase, N-terminal domain
M478_3498	PF00155	Aminotransferase class I and II
M478_3499	PF04237	YjbR
M478_35	PF00005	ABC transporter
M478_350	PF01566	M478_350
M478_3500	PF00005	ABC transporter
M478_3501	PF00436	Single-strand binding protein family
M478_3502	PF05336	Domain of unknown function (DUF718)
M478_3503	PF00465	Iron-containing alcohol dehydrogenase
M478_3504	PF00596	Class II Aldolase and Adducin N-terminal domain
M478_3505	PF06134	L-rhamnose isomerase (RhaA)
M478_3506	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_3506	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_3509	PF02311	AraC-like ligand binding domain
M478_3509	PF12833	Helix-turn-helix domain
M478_351	PF10697	M478_351
M478_3510	PF02311	AraC-like ligand binding domain
M478_3510	PF12833	Helix-turn-helix domain
M478_3511	PF06379	M478_3511
M478_3514	PF03272	M478_3514
M478_3514	PF13402	Peptidase M60-like family
M478_3517	PF00440	Bacterial regulatory proteins, tetR family
M478_3518	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_3518	PF13247	4Fe-4S dicluster domain
M478_3518	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
M478_3519	PF12800	4Fe-4S binding domain
M478_3519	PF13187	4Fe-4S dicluster domain
M478_352	PF00248	Aldo/keto reductase family
M478_3520	PF00384	Molybdopterin oxidoreductase
M478_3520	PF01568	Molydopterin dinucleotide binding domain
M478_3520	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
M478_3521	PF02683	M478_3521
M478_3521	PF11412	Disulphide bond corrector protein DsbC
M478_3521	PF13899	Thioredoxin-like
M478_3522	PF03091	CutA1 divalent ion tolerance protein
M478_3523	PF03605	M478_3523
M478_3524	PF00206	Lyase
M478_3524	PF10415	Fumarase C C-terminus
M478_3525	PF04186	M478_3525
M478_3526	PF00166	Chaperonin 10 Kd subunit
M478_3527	PF00118	TCP-1/cpn60 chaperonin family
M478_3528	PF13698	M478_3528
M478_3529	PF04055	Radical SAM superfamily
M478_3529	PF13353	4Fe-4S single cluster domain
M478_353	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_353	PF03466	LysR substrate binding domain
M478_3530	PF01132	Elongation factor P (EF-P) OB domain
M478_3530	PF08207	Elongation factor P (EF-P) KOW-like domain
M478_3530	PF09285	Elongation factor P, C-terminal
M478_3531	PF00893	Small Multidrug Resistance protein
M478_3532	PF02313	Fumarate reductase subunit D
M478_3533	PF02300	Fumarate reductase subunit C
M478_3534	PF13085	2Fe-2S iron-sulfur cluster binding domain
M478_3534	PF13183	4Fe-4S dicluster domain
M478_3535	PF00890	FAD binding domain
M478_3535	PF02910	Fumarate reductase flavoprotein C-term
M478_3536	PF00152	tRNA synthetases class II (D, K and N)
M478_3537	PF00924	Mechanosensitive ion channel
M478_3537	PF12794	M478_3537
M478_3537	PF12795	M478_3537
M478_3538	PF02666	M478_3538
M478_3539	PF03193	Protein of unknown function, DUF258
M478_354	PF05232	M478_354
M478_3540	PF00929	Exonuclease
M478_3544	PF08331	M478_3544
M478_3544	PF13484	M478_3544
M478_3545	PF01256	Carbohydrate kinase
M478_3545	PF03853	YjeF-related protein N-terminus
M478_3546	PF02367	Uncharacterised P-loop hydrolase UPF0079
M478_3547	PF01476	LysM domain
M478_3547	PF01520	N-acetylmuramoyl-L-alanine amidase
M478_3547	PF11741	AMIN domain
M478_3548	PF01119	DNA mismatch repair protein, C-terminal domain
M478_3548	PF08676	MutL C terminal dimerisation domain
M478_3548	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3549	PF01715	IPP transferase
M478_355	PF02685	Glucokinase
M478_3550	PF17209	M478_3550
M478_3551	PF01926	50S ribosome-binding GTPase
M478_3551	PF13167	M478_3551
M478_3551	PF16360	M478_3551
M478_3552	PF01145	SPFH domain / Band 7 family
M478_3552	PF12221	M478_3552
M478_3553	PF01145	SPFH domain / Band 7 family
M478_3554	PF09838	M478_3554
M478_3555	PF00709	Adenylosuccinate synthetase
M478_3556	PF02082	Transcriptional regulator
M478_3557	PF00575	S1 RNA binding domain
M478_3557	PF00773	RNB domain
M478_3557	PF08206	Ribonuclease B OB domain
M478_3557	PF08461	Ribonuclease R winged-helix domain
M478_3558	PF00588	SpoU rRNA Methylase family
M478_3558	PF08032	RNA 2'-O ribose methyltransferase substrate binding
M478_3559	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
M478_3559	PF02770	Acyl-CoA dehydrogenase, middle domain
M478_356	PF07350	Protein of unknown function (DUF1479)
M478_3560	PF07338	Protein of unknown function (DUF1471)
M478_3562	PF01695	IstB-like ATP binding protein
M478_3563	PF00665	Integrase core domain
M478_3563	PF02796	Helix-turn-helix domain of resolvase
M478_3564	PF00326	Prolyl oligopeptidase family
M478_3566	PF01250	Ribosomal protein S6
M478_3567	PF01084	Ribosomal protein S18
M478_3568	PF01281	Ribosomal protein L9, N-terminal domain
M478_3568	PF03948	Ribosomal protein L9, C-terminal domain
M478_3569	PF01797	Transposase IS200 like
M478_357	PF00155	Aminotransferase class I and II
M478_3570	PF12582	M478_3570
M478_3571	PF04225	Opacity-associated protein A LysM-like domain
M478_3571	PF08525	M478_3571
M478_3572	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
M478_3572	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
M478_3573	PF01814	Hemerythrin HHE cation binding domain
M478_3573	PF04405	M478_3573
M478_3574	PF00149	Calcineurin-like phosphoesterase
M478_3574	PF02872	5'-nucleotidase, C-terminal domain
M478_3575	PF00459	Inositol monophosphatase family
M478_3576	PF09695	M478_3576
M478_3577	PF06526	Protein of unknown function (DUF1107)
M478_3578	PF00571	CBS domain
M478_3578	PF01595	M478_3578
M478_3578	PF03471	Transporter associated domain
M478_3579	PF01625	Peptide methionine sulfoxide reductase
M478_358	PF01292	Prokaryotic cytochrome b561
M478_3580	PF01103	Surface antigen
M478_3580	PF07244	Surface antigen variable number repeat
M478_3580	PF17243	M478_3580
M478_3581	PF04357	M478_3581
M478_3582	PF06094	AIG2-like family
M478_3583	PF00719	Inorganic pyrophosphatase
M478_3584	PF00316	Fructose-1-6-bisphosphatase
M478_3585	PF01225	Mur ligase family, catalytic domain
M478_3585	PF02875	Mur ligase family, glutamate ligase domain
M478_3585	PF08245	Mur ligase middle domain
M478_3586	PF07338	Protein of unknown function (DUF1471)
M478_3587	PF01316	Arginine repressor, DNA binding domain
M478_3587	PF02863	Arginine repressor, C-terminal domain
M478_3588	PF00056	lactate/malate dehydrogenase, NAD binding domain
M478_3588	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
M478_3589	PF13693	Winged helix-turn-helix DNA-binding
M478_359	PF15970	M478_359
M478_3590	PF02316	Mu DNA-binding domain
M478_3591	PF00348	Polyprenyl synthetase
M478_3592	PF00829	Ribosomal prokaryotic L21 protein
M478_3593	PF01016	Ribosomal L27 protein
M478_3594	PF00892	EamA-like transporter family
M478_3595	PF01018	GTP1/OBG
M478_3595	PF01926	50S ribosome-binding GTPase
M478_3596	PF00512	His Kinase A (phospho-acceptor) domain
M478_3596	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3597	PF00072	Response regulator receiver domain
M478_3597	PF00486	Transcriptional regulatory protein, C terminal
M478_3598	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
M478_3599	PF01272	Transcription elongation factor, GreA/GreB, C-term
M478_3599	PF03449	Transcription elongation factor, N-terminal
M478_36	PF00528	Binding-protein-dependent transport system inner membrane component
M478_360	PF03783	Curli production assembly/transport component CsgG
M478_3600	PF01985	CRS1 / YhbY (CRM) domain
M478_3601	PF01728	FtsJ-like methyltransferase
M478_3602	PF00004	ATPase family associated with various cellular activities (AAA)
M478_3602	PF01434	Peptidase family M41
M478_3602	PF06480	FtsH Extracellular
M478_3603	PF00809	Pterin binding enzyme
M478_3604	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
M478_3604	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
M478_3604	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
M478_3604	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
M478_3605	PF03840	Preprotein translocase SecG subunit
M478_3608	PF02576	Uncharacterised BCR, YhbC family COG0779
M478_3608	PF17384	M478_3608
M478_3609	PF08529	NusA N-terminal domain
M478_3609	PF13184	NusA-like KH domain
M478_3609	PF14520	Helix-hairpin-helix domain
M478_361	PF16068	M478_361
M478_3610	PF00009	Elongation factor Tu GTP binding domain
M478_3610	PF03144	Elongation factor Tu domain 2
M478_3610	PF04760	Translation initiation factor IF-2, N-terminal region
M478_3610	PF08364	M478_3610
M478_3610	PF11987	Translation-initiation factor 2
M478_3611	PF02033	Ribosome-binding factor A
M478_3612	PF01509	TruB family pseudouridylate synthase (N terminal domain)
M478_3612	PF09157	Pseudouridine synthase II TruB, C-terminal
M478_3612	PF16198	M478_3612
M478_3613	PF00312	Ribosomal protein S15
M478_3614	PF13518	Helix-turn-helix domain
M478_3615	PF00665	Integrase core domain
M478_3615	PF13276	M478_3615
M478_3616	PF00013	KH domain
M478_3616	PF00575	S1 RNA binding domain
M478_3616	PF01138	3' exoribonuclease family, domain 1
M478_3616	PF03725	3' exoribonuclease family, domain 2
M478_3616	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
M478_3617	PF07719	Tetratricopeptide repeat
M478_3617	PF13181	Tetratricopeptide repeat
M478_3618	PF00270	DEAD/DEAH box helicase
M478_3618	PF00271	Helicase conserved C-terminal domain
M478_3618	PF03880	DbpA RNA binding domain
M478_3618	PF12343	M478_3618
M478_3619	PF05973	M478_3619
M478_362	PF05643	Putative bacterial lipoprotein (DUF799)
M478_3620	PF01381	Helix-turn-helix
M478_3621	PF00296	Luciferase-like monooxygenase
M478_3623	PF16576	M478_3623
M478_3624	PF00873	AcrB/AcrD/AcrF family
M478_3625	PF02321	Outer membrane efflux protein
M478_3626	PF01136	M478_3626
M478_3627	PF01136	M478_3627
M478_3628	PF02036	SCP-2 sterol transfer family
M478_3629	PF00583	Acetyltransferase (GNAT) family
M478_363	PF00037	4Fe-4S binding domain
M478_363	PF12838	4Fe-4S dicluster domain
M478_3631	PF05426	Alginate lyase
M478_3631	PF07940	Heparinase II/III-like protein
M478_3632	PF05426	Alginate lyase
M478_3633	PF01547	Bacterial extracellular solute-binding protein
M478_3634	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3635	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3636	PF00005	ABC transporter
M478_3636	PF08402	TOBE domain
M478_3637	PF05426	Alginate lyase
M478_364	PF02613	Nitrate reductase delta subunit
M478_3640	PF12706	Beta-lactamase superfamily domain
M478_3641	PF13238	AAA domain
M478_3642	PF07969	Amidohydrolase family
M478_3643	PF00005	ABC transporter
M478_3644	PF00005	ABC transporter
M478_3645	PF06007	M478_3645
M478_3646	PF05861	M478_3646
M478_3647	PF05845	Bacterial phosphonate metabolism protein (PhnH)
M478_3648	PF06754	M478_3648
M478_3649	PF00392	Bacterial regulatory proteins, gntR family
M478_3649	PF07702	UTRA domain
M478_365	PF04976	M478_365
M478_3651	PF13353	4Fe-4S single cluster domain
M478_3652	PF03477	ATP cone domain
M478_3652	PF13597	Anaerobic ribonucleoside-triphosphate reductase
M478_3653	PF00005	ABC transporter
M478_3654	PF00005	ABC transporter
M478_3655	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3655	PF12911	M478_3655
M478_3656	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3658	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_3659	PF04074	Domain of unknown function (DUF386)
M478_366	PF12800	4Fe-4S binding domain
M478_366	PF13247	4Fe-4S dicluster domain
M478_3660	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
M478_3660	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
M478_3661	PF06877	Regulator of ribonuclease activity B
M478_3662	PF00583	Acetyltransferase (GNAT) family
M478_3663	PF00133	tRNA synthetases class I (I, L, M and V)
M478_3663	PF08264	Anticodon-binding domain of tRNA
M478_3663	PF10458	Valyl tRNA synthetase tRNA binding arm
M478_3664	PF04364	DNA polymerase III chi subunit, HolC
M478_3665	PF00883	Cytosol aminopeptidase family, catalytic domain
M478_3665	PF02789	Cytosol aminopeptidase family, N-terminal domain
M478_3666	PF03739	M478_3666
M478_3667	PF03739	M478_3667
M478_3669	PF00589	Phage integrase family
M478_3669	PF13356	Domain of unknown function (DUF4102)
M478_367	PF00384	Molybdopterin oxidoreductase
M478_367	PF01568	Molydopterin dinucleotide binding domain
M478_367	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
M478_3670	PF03235	M478_3670
M478_3670	PF07510	M478_3670
M478_3671	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3672	PF01695	IstB-like ATP binding protein
M478_3673	PF00665	Integrase core domain
M478_3673	PF02796	Helix-turn-helix domain of resolvase
M478_3674	PF01797	Transposase IS200 like
M478_3675	PF03884	Domain of unknown function (DUF329)
M478_3676	PF07072	Protein of unknown function (DUF1342)
M478_3677	PF01121	Dephospho-CoA kinase
M478_3678	PF00478	IMP dehydrogenase / GMP reductase domain
M478_3679	PF00482	Type II secretion system (T2SS), protein F
M478_368	PF13988	M478_368
M478_3680	PF00437	Type II/IV secretion system protein
M478_3681	PF07963	Prokaryotic N-terminal methylation motif
M478_3682	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
M478_3682	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
M478_3683	PF01510	N-acetylmuramoyl-L-alanine amidase
M478_3684	PF17113	M478_3684
M478_3685	PF00324	Amino acid permease
M478_3686	PF00392	Bacterial regulatory proteins, gntR family
M478_3686	PF07729	FCD domain
M478_3687	PF00456	Transketolase, thiamine diphosphate binding domain
M478_3688	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
M478_3688	PF00364	Biotin-requiring enzyme
M478_3688	PF02817	e3 binding domain
M478_3689	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
M478_3689	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_369	PF05638	Protein of unknown function (DUF796)
M478_3690	PF01797	Transposase IS200 like
M478_3691	PF00330	Aconitase family (aconitate hydratase)
M478_3691	PF06434	Aconitate hydratase 2 N-terminus
M478_3691	PF11791	Aconitate B N-terminal domain
M478_3692	PF06062	M478_3692
M478_3693	PF00892	EamA-like transporter family
M478_3694	PF02675	S-adenosylmethionine decarboxylase
M478_3695	PF01564	Spermine/spermidine synthase
M478_3695	PF17284	M478_3695
M478_3696	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
M478_3697	PF00394	Multicopper oxidase
M478_3697	PF07731	Multicopper oxidase
M478_3697	PF07732	Multicopper oxidase
M478_3697	PF10518	TAT (twin-arginine translocation) pathway signal sequence
M478_3698	PF00156	Phosphoribosyl transferase domain
M478_3699	PF00484	Carbonic anhydrase
M478_37	PF00528	Binding-protein-dependent transport system inner membrane component
M478_370	PF09900	M478_370
M478_3700	PF00005	ABC transporter
M478_3701	PF01061	M478_3701
M478_3703	PF01522	Polysaccharide deacetylase
M478_3704	PF02261	Aspartate decarboxylase
M478_3705	PF02569	Pantoate-beta-alanine ligase
M478_3706	PF02548	Ketopantoate hydroxymethyltransferase
M478_3707	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
M478_3708	PF01743	Poly A polymerase head domain
M478_3708	PF12626	Polymerase A arginine-rich C-terminus
M478_3708	PF12627	Probable RNA and SrmB- binding site of polymerase A
M478_3709	PF00749	tRNA synthetases class I (E and Q), catalytic domain
M478_371	PF00005	ABC transporter
M478_3710	PF01258	Prokaryotic dksA/traR C4-type zinc finger
M478_3711	PF03749	Sugar fermentation stimulation protein
M478_3712	PF02834	LigT like Phosphoesterase
M478_3713	PF00270	DEAD/DEAH box helicase
M478_3713	PF00271	Helicase conserved C-terminal domain
M478_3713	PF04408	Helicase associated domain (HA2)
M478_3713	PF08482	M478_3713
M478_3714	PF00905	Penicillin binding protein transpeptidase domain
M478_3714	PF00912	Transglycosylase
M478_3714	PF14812	M478_3714
M478_3714	PF14814	Bifunctional transglycosylase second domain
M478_3715	PF00005	ABC transporter
M478_3716	PF01497	Periplasmic binding protein
M478_3717	PF01032	FecCD transport family
M478_3718	PF00202	Aminotransferase class-III
M478_3719	PF00654	Voltage gated chloride channel
M478_372	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3720	PF01521	Iron-sulphur cluster biosynthesis
M478_3721	PF03458	M478_3721
M478_3722	PF01497	Periplasmic binding protein
M478_3723	PF01048	Phosphorylase superfamily
M478_3724	PF01966	HD domain
M478_3724	PF13286	Phosphohydrolase-associated domain
M478_3725	PF00595	PDZ domain (Also known as DHR or GLGF)
M478_3725	PF13180	PDZ domain
M478_3725	PF13365	Trypsin-like peptidase domain
M478_3726	PF00072	Response regulator receiver domain
M478_3726	PF00512	His Kinase A (phospho-acceptor) domain
M478_3726	PF01627	Hpt domain
M478_3726	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3726	PF09984	M478_3726
M478_3727	PF02824	TGS domain
M478_3727	PF04607	Region found in RelA / SpoT proteins
M478_3727	PF13291	ACT domain
M478_3727	PF13328	HD domain
M478_3728	PF03819	MazG nucleotide pyrophosphohydrolase domain
M478_3729	PF00117	Glutamine amidotransferase class-I
M478_3729	PF06418	CTP synthase N-terminus
M478_373	PF13343	Bacterial extracellular solute-binding protein
M478_3730	PF00113	Enolase, C-terminal TIM barrel domain
M478_3730	PF03952	Enolase, N-terminal domain
M478_3731	PF00080	Copper/zinc superoxide dismutase (SODC)
M478_3732	PF04055	Radical SAM superfamily
M478_3732	PF13394	4Fe-4S single cluster domain
M478_3733	PF01242	6-pyruvoyl tetrahydropterin synthase
M478_3734	PF00175	Oxidoreductase NAD-binding domain
M478_3734	PF00258	Flavodoxin
M478_3734	PF00667	FAD binding domain
M478_3735	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
M478_3735	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
M478_3736	PF01507	Phosphoadenosine phosphosulfate reductase family
M478_3737	PF01507	Phosphoadenosine phosphosulfate reductase family
M478_3738	PF15919	M478_3738
M478_3739	PF07927	YcfA-like protein
M478_374	PF13406	Transglycosylase SLT domain
M478_3743	PF01507	Phosphoadenosine phosphosulfate reductase family
M478_3744	PF00009	Elongation factor Tu GTP binding domain
M478_3745	PF01583	Adenylylsulphate kinase
M478_3746	PF12084	M478_3746
M478_3747	PF04977	Septum formation initiator
M478_3748	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
M478_3749	PF02542	YgbB family
M478_375	PF00196	Bacterial regulatory proteins, luxR family
M478_3750	PF01142	tRNA pseudouridine synthase D (TruD)
M478_3751	PF01975	Survival protein SurE
M478_3752	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
M478_3753	PF01476	LysM domain
M478_3753	PF01551	Peptidase family M23
M478_3754	PF00140	Sigma-70 factor, region 1
M478_3754	PF04539	Sigma-70 region 3
M478_3754	PF04542	Sigma-70 region 2
M478_3754	PF04545	Sigma-70, region 4
M478_3755	PF00488	MutS domain V
M478_3755	PF01624	MutS domain I
M478_3755	PF05188	MutS domain II
M478_3755	PF05190	MutS family domain IV
M478_3755	PF05192	MutS domain III
M478_3756	PF02502	Ribose/Galactose Isomerase
M478_3757	PF00107	Zinc-binding dehydrogenase
M478_3757	PF08240	Alcohol dehydrogenase GroES-like domain
M478_3758	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_3759	PF02733	Dak1 domain
M478_376	PF08786	Domain of unknown function (DUF1795)
M478_3760	PF02734	DAK2 domain
M478_3761	PF04198	Putative sugar-binding domain
M478_3761	PF13518	Helix-turn-helix domain
M478_3762	PF02040	M478_3762
M478_3763	PF01022	Bacterial regulatory protein, arsR family
M478_3764	PF04703	FaeA-like protein
M478_3765	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_3766	PF00034	Cytochrome c
M478_3766	PF03150	Di-haem cytochrome c peroxidase
M478_3766	PF14376	M478_3766
M478_3768	PF00593	TonB dependent receptor
M478_3768	PF07715	TonB-dependent Receptor Plug Domain
M478_3769	PF07906	M478_3769
M478_377	PF00691	OmpA family
M478_3770	PF00557	Metallopeptidase family M24
M478_3771	PF11903	M478_3771
M478_3772	PF05681	M478_3772
M478_3772	PF05683	Fumarase C-terminus
M478_3773	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_3773	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_3774	PF01261	Xylose isomerase-like TIM barrel
M478_3775	PF02653	M478_3775
M478_3776	PF02653	M478_3776
M478_3777	PF00005	ABC transporter
M478_3778	PF01797	Transposase IS200 like
M478_3779	PF13407	Periplasmic binding protein domain
M478_3780	PF00455	M478_3780
M478_3780	PF08220	DeoR-like helix-turn-helix domain
M478_3781	PF00596	Class II Aldolase and Adducin N-terminal domain
M478_3782	PF00384	Molybdopterin oxidoreductase
M478_3782	PF01568	Molydopterin dinucleotide binding domain
M478_3782	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
M478_3783	PF12800	4Fe-4S binding domain
M478_3783	PF13247	4Fe-4S dicluster domain
M478_3784	PF04976	M478_3784
M478_3785	PF02613	Nitrate reductase delta subunit
M478_3786	PF01292	Prokaryotic cytochrome b561
M478_3787	PF07361	Cytochrome b562
M478_3788	PF00141	Peroxidase
M478_3789	PF13407	Periplasmic binding protein domain
M478_379	PF11397	M478_379
M478_3790	PF10054	Predicted periplasmic lipoprotein (DUF2291)
M478_3791	PF00005	ABC transporter
M478_3792	PF02653	M478_3792
M478_3793	PF00456	Transketolase, thiamine diphosphate binding domain
M478_3794	PF02779	Transketolase, pyrimidine binding domain
M478_3794	PF02780	Transketolase, C-terminal domain
M478_3795	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_3795	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_3796	PF02952	L-fucose isomerase, C-terminal domain
M478_3797	PF01047	MarR family
M478_3797	PF04198	Putative sugar-binding domain
M478_3798	PF07690	Major Facilitator Superfamily
M478_3799	PF02464	Competence-damaged protein
M478_38	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_380	PF00419	Fimbrial protein
M478_3800	PF00154	recA bacterial DNA recombination protein
M478_3801	PF02631	RecX family
M478_3802	PF01411	tRNA synthetases class II (A)
M478_3802	PF02272	DHHA1 domain
M478_3802	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
M478_3803	PF02599	Global regulator protein family
M478_3808	PF13419	Haloacid dehalogenase-like hydrolase
M478_381	PF06812	M478_381
M478_3810	PF04262	Glutamate-cysteine ligase
M478_3811	PF02664	S-Ribosylhomocysteinase (LuxS)
M478_3812	PF01797	Transposase IS200 like
M478_3813	PF00571	CBS domain
M478_3813	PF01595	M478_3813
M478_3813	PF03471	Transporter associated domain
M478_3814	PF01578	M478_3814
M478_3815	PF00448	SRP54-type protein, GTPase domain
M478_3815	PF02881	SRP54-type protein, helical bundle domain
M478_3815	PF02978	Signal peptide binding domain
M478_3816	PF00886	Ribosomal protein S16
M478_3817	PF01782	RimM N-terminal domain
M478_3817	PF05239	PRC-barrel domain
M478_3818	PF01746	tRNA (Guanine-1)-methyltransferase
M478_3819	PF01245	Ribosomal protein L19
M478_382	PF06996	M478_382
M478_3820	PF01797	Transposase IS200 like
M478_3821	PF04338	Protein of unknown function, DUF481
M478_3822	PF03605	M478_3822
M478_3823	PF03605	M478_3823
M478_3824	PF03605	M478_3824
M478_3825	PF00072	Response regulator receiver domain
M478_3825	PF04397	LytTr DNA-binding domain
M478_3826	PF00793	DAHP synthetase I family
M478_3827	PF01817	Chorismate mutase type II
M478_3827	PF02153	Prephenate dehydrogenase
M478_3828	PF00800	Prephenate dehydratase
M478_3829	PF01695	IstB-like ATP binding protein
M478_383	PF05947	M478_383
M478_3832	PF00665	Integrase core domain
M478_3832	PF02796	Helix-turn-helix domain of resolvase
M478_3833	PF00800	Prephenate dehydratase
M478_3833	PF01817	Chorismate mutase type II
M478_3834	PF01797	Transposase IS200 like
M478_3835	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
M478_3836	PF13525	Outer membrane lipoprotein
M478_3837	PF00849	RNA pseudouridylate synthase
M478_3837	PF01479	S4 domain
M478_3838	PF02578	Multi-copper polyphenol oxidoreductase laccase
M478_3839	PF00004	ATPase family associated with various cellular activities (AAA)
M478_3839	PF02861	Clp amino terminal domain
M478_3839	PF07724	AAA domain (Cdc48 subfamily)
M478_3839	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_384	PF00004	ATPase family associated with various cellular activities (AAA)
M478_384	PF02861	Clp amino terminal domain
M478_384	PF07724	AAA domain (Cdc48 subfamily)
M478_384	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_3846	PF10043	M478_3846
M478_3847	PF13091	PLD-like domain
M478_3848	PF00583	Acetyltransferase (GNAT) family
M478_3848	PF13380	CoA binding domain
M478_3848	PF13549	ATP-grasp domain
M478_3848	PF13607	Succinyl-CoA ligase like flavodoxin domain
M478_3849	PF03942	M478_3849
M478_385	PF16970	M478_385
M478_3850	PF00085	Thioredoxin
M478_3851	PF00588	SpoU rRNA Methylase family
M478_3851	PF08032	RNA 2'-O ribose methyltransferase substrate binding
M478_3852	PF07690	Major Facilitator Superfamily
M478_3853	PF00529	HlyD family secretion protein
M478_3853	PF16576	M478_3853
M478_3854	PF01047	MarR family
M478_3855	PF05437	M478_3855
M478_3856	PF03591	M478_3856
M478_3857	PF07690	Major Facilitator Superfamily
M478_3858	PF11533	Protein of unknown function (DUF3225)
M478_3859	PF01425	Amidase
M478_386	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_386	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_3860	PF13318	M478_3860
M478_3861	PF01380	SIS domain
M478_3861	PF01418	Helix-turn-helix domain, rpiR family
M478_3862	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_3863	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3864	PF00528	Binding-protein-dependent transport system inner membrane component
M478_3865	PF00005	ABC transporter
M478_3866	PF00266	Aminotransferase class-V
M478_3867	PF01695	IstB-like ATP binding protein
M478_387	PF00577	Outer membrane usher protein
M478_387	PF13954	PapC N-terminal domain
M478_3870	PF00665	Integrase core domain
M478_3870	PF02796	Helix-turn-helix domain of resolvase
M478_3872	PF01546	Peptidase family M20/M25/M40
M478_3873	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
M478_3873	PF08479	POTRA domain, ShlB-type
M478_3874	PF05860	haemagglutination activity domain
M478_3874	PF13018	M478_3874
M478_3877	PF03333	Adhesin biosynthesis transcription regulatory protein
M478_3878	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
M478_3878	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
M478_3878	PF09317	M478_3878
M478_3879	PF13580	SIS domain
M478_388	PF00872	M478_388
M478_3880	PF03734	L,D-transpeptidase catalytic domain
M478_3881	PF13230	Glutamine amidotransferases class-II
M478_3882	PF05896	M478_3882
M478_3882	PF11973	M478_3882
M478_3883	PF03116	M478_3883
M478_3884	PF04205	FMN-binding domain
M478_3885	PF02508	M478_3885
M478_3886	PF02508	M478_3886
M478_3887	PF00111	2Fe-2S iron-sulfur cluster binding domain
M478_3887	PF00175	Oxidoreductase NAD-binding domain
M478_3887	PF00970	Oxidoreductase FAD-binding domain
M478_3888	PF02424	ApbE family
M478_3889	PF04400	M478_3889
M478_389	PF00577	Outer membrane usher protein
M478_389	PF13953	PapC C-terminal domain
M478_3890	PF03009	Glycerophosphoryl diester phosphodiesterase family
M478_3891	PF00817	impB/mucB/samB family
M478_3891	PF11798	IMS family HHH motif
M478_3891	PF11799	impB/mucB/samB family C-terminal domain
M478_3892	PF01546	Peptidase family M20/M25/M40
M478_3892	PF07687	Peptidase dimerisation domain
M478_3894	PF03067	Chitin binding domain
M478_3895	PF16083	M478_3895
M478_3896	PF00156	Phosphoribosyl transferase domain
M478_3897	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
M478_3898	PF07417	Transcriptional regulator Crl
M478_3899	PF00696	Amino acid kinase family
M478_3899	PF01472	PUA domain
M478_39	PF00795	Carbon-nitrogen hydrolase
M478_390	PF00419	Fimbrial protein
M478_3900	PF00171	Aldehyde dehydrogenase family
M478_3901	PF07238	PilZ domain
M478_3901	PF07317	Flagellar regulator YcgR
M478_3903	PF08241	Methyltransferase domain
M478_3904	PF00398	Ribosomal RNA adenine dimethylase
M478_3905	PF01202	Shikimate kinase
M478_3906	PF06865	Protein of unknown function (DUF1255)
M478_3907	PF04381	Putative exonuclease, RdgC
M478_3908	PF00480	ROK family
M478_3909	PF13476	AAA domain
M478_3909	PF13558	Putative exonuclease SbcCD, C subunit
M478_391	PF05591	M478_391
M478_3910	PF00149	Calcineurin-like phosphoesterase
M478_3910	PF12320	Type 5 capsule protein repressor C-terminal domain
M478_3911	PF00072	Response regulator receiver domain
M478_3911	PF00486	Transcriptional regulatory protein, C terminal
M478_3912	PF00512	His Kinase A (phospho-acceptor) domain
M478_3912	PF00989	PAS fold
M478_3912	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3912	PF11808	M478_3912
M478_3913	PF12849	PBP superfamily domain
M478_3914	PF05525	M478_3914
M478_3915	PF01797	Transposase IS200 like
M478_3916	PF00324	Amino acid permease
M478_3917	PF00128	Alpha amylase, catalytic domain
M478_3917	PF02903	Alpha amylase, N-terminal ig-like domain
M478_3918	PF00106	short chain dehydrogenase
M478_3919	PF01019	Gamma-glutamyltranspeptidase
M478_392	PF05943	M478_392
M478_3920	PF01019	Gamma-glutamyltranspeptidase
M478_3921	PF00578	AhpC/TSA family
M478_3921	PF10417	C-terminal domain of 1-Cys peroxiredoxin
M478_3922	PF04336	M478_3922
M478_3923	PF02547	Queuosine biosynthesis protein
M478_3924	PF01702	Queuine tRNA-ribosyltransferase
M478_3925	PF02699	Preprotein translocase subunit
M478_3926	PF02355	Protein export membrane protein
M478_3926	PF07549	SecD/SecF GG Motif
M478_3926	PF13721	SecD export protein N-terminal TM region
M478_3927	PF02355	Protein export membrane protein
M478_3927	PF07549	SecD/SecF GG Motif
M478_3928	PF01797	Transposase IS200 like
M478_393	PF05638	Protein of unknown function (DUF796)
M478_3931	PF03477	ATP cone domain
M478_3932	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
M478_3932	PF01872	RibD C-terminal domain
M478_3933	PF00885	6,7-dimethyl-8-ribityllumazine synthase
M478_3934	PF01029	NusB family
M478_3935	PF00586	AIR synthase related protein, N-terminal domain
M478_3935	PF02769	AIR synthase related protein, C-terminal domain
M478_3936	PF04608	Phosphatidylglycerophosphatase A
M478_3937	PF01797	Transposase IS200 like
M478_3938	PF02779	Transketolase, pyrimidine binding domain
M478_3938	PF02780	Transketolase, C-terminal domain
M478_3938	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
M478_3939	PF00348	Polyprenyl synthetase
M478_394	PF12790	Type VI secretion lipoprotein
M478_3940	PF02609	Exonuclease VII small subunit
M478_3941	PF02568	Thiamine biosynthesis protein (ThiI)
M478_3941	PF02926	THUMP domain
M478_3942	PF01965	DJ-1/PfpI family
M478_3943	PF02558	Ketopantoate reductase PanE/ApbA
M478_3943	PF08546	Ketopantoate reductase PanE/ApbA C terminal
M478_3944	PF04461	Protein of unknown function (DUF520)
M478_3945	PF07690	Major Facilitator Superfamily
M478_3946	PF01040	UbiA prenyltransferase family
M478_3947	PF03626	M478_3947
M478_3948	PF00510	Cytochrome c oxidase subunit III
M478_3949	PF00115	Cytochrome C and Quinol oxidase polypeptide I
M478_395	PF05936	M478_395
M478_3950	PF06481	COX Aromatic Rich Motif
M478_3951	PF03502	Nucleoside-specific channel-forming protein, Tsx
M478_3952	PF07690	Major Facilitator Superfamily
M478_3953	PF03923	M478_3953
M478_3953	PF08139	M478_3953
M478_3954	PF01722	BolA-like protein
M478_3956	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
M478_3956	PF05697	Bacterial trigger factor protein (TF)
M478_3956	PF05698	Bacterial trigger factor protein (TF) C-terminus
M478_3957	PF00574	Clp protease
M478_3958	PF06689	ClpX C4-type zinc finger
M478_3958	PF07724	AAA domain (Cdc48 subfamily)
M478_3958	PF10431	C-terminal, D2-small domain, of ClpB protein
M478_3959	PF00004	ATPase family associated with various cellular activities (AAA)
M478_3959	PF02190	ATP-dependent protease La (LON) domain
M478_3959	PF05362	Lon protease (S16) C-terminal proteolytic domain
M478_396	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
M478_3960	PF00216	Bacterial DNA-binding protein
M478_3961	PF13145	PPIC-type PPIASE domain
M478_3961	PF13624	SurA N-terminal domain
M478_3962	PF12836	Helix-hairpin-helix motif
M478_3963	PF13279	Thioesterase-like superfamily
M478_3964	PF06508	Queuosine biosynthesis protein QueC
M478_3965	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_3965	PF12793	M478_3965
M478_3966	PF08282	haloacid dehalogenase-like hydrolase
M478_3967	PF00291	Pyridoxal-phosphate dependent enzyme
M478_3968	PF01037	AsnC family
M478_3968	PF13412	Winged helix-turn-helix DNA-binding
M478_3969	PF00005	ABC transporter
M478_3969	PF00664	ABC transporter transmembrane region
M478_397	PF00665	Integrase core domain
M478_397	PF02796	Helix-turn-helix domain of resolvase
M478_3970	PF00005	ABC transporter
M478_3970	PF00664	ABC transporter transmembrane region
M478_3971	PF00543	Nitrogen regulatory protein P-II
M478_3972	PF00909	Ammonium Transporter Family
M478_3973	PF13622	Thioesterase-like superfamily
M478_3974	PF09619	Type III secretion system lipoprotein chaperone (YscW)
M478_3975	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
M478_3976	PF05321	Haemolysin expression modulating protein
M478_3977	PF10757	M478_3977
M478_3979	PF00444	Ribosomal protein L36
M478_3980	PF01197	Ribosomal protein L31
M478_3981	PF00873	AcrB/AcrD/AcrF family
M478_3982	PF00529	HlyD family secretion protein
M478_3982	PF16576	M478_3982
M478_3983	PF00440	Bacterial regulatory proteins, tetR family
M478_3983	PF08361	MAATS-type transcriptional repressor, C-terminal region
M478_3984	PF02635	DsrE/DsrF-like family
M478_3985	PF00924	Mechanosensitive ion channel
M478_3985	PF12794	M478_3985
M478_3985	PF12795	M478_3985
M478_3986	PF07445	Primosomal replication protein priB and priC
M478_3987	PF04304	M478_3987
M478_3988	PF00156	Phosphoribosyl transferase domain
M478_3989	PF12168	M478_3989
M478_3989	PF12169	DNA polymerase III subunits gamma and tau domain III
M478_3989	PF12170	DNA polymerase III tau subunit V interacting with alpha
M478_3989	PF13177	DNA polymerase III, delta subunit
M478_399	PF01695	IstB-like ATP binding protein
M478_3990	PF02575	YbaB/EbfC DNA-binding family
M478_3991	PF02132	RecR protein
M478_3991	PF13662	Toprim domain
M478_3992	PF00183	Hsp90 protein
M478_3992	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_3993	PF00406	Adenylate kinase
M478_3993	PF05191	Adenylate kinase, active site lid
M478_3994	PF00762	Ferrochelatase
M478_3995	PF00111	2Fe-2S iron-sulfur cluster binding domain
M478_3995	PF00175	Oxidoreductase NAD-binding domain
M478_3995	PF00970	Oxidoreductase FAD-binding domain
M478_3996	PF00483	Nucleotidyl transferase
M478_3997	PF16363	M478_3997
M478_3998	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
M478_3999	PF01370	NAD dependent epimerase/dehydratase family
M478_4	PF00005	ABC transporter
M478_40	PF00571	CBS domain
M478_40	PF03471	Transporter associated domain
M478_400	PF00691	OmpA family
M478_400	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
M478_4000	PF13450	NAD(P)-binding Rossmann-like domain
M478_4002	PF00535	Glycosyl transferase family 2
M478_4004	PF13692	Glycosyl transferases group 1
M478_4007	PF00534	Glycosyl transferases group 1
M478_4007	PF13439	Glycosyltransferase Family 4
M478_4008	PF16363	M478_4008
M478_4009	PF16363	M478_4009
M478_401	PF06744	M478_401
M478_401	PF06761	M478_401
M478_401	PF14331	M478_401
M478_4010	PF01370	NAD dependent epimerase/dehydratase family
M478_4011	PF00483	Nucleotidyl transferase
M478_4011	PF01050	Mannose-6-phosphate isomerase
M478_4012	PF00535	Glycosyl transferase family 2
M478_4013	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
M478_4013	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
M478_4013	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
M478_4013	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
M478_4014	PF02706	Chain length determinant protein
M478_4015	PF00294	pfkB family carbohydrate kinase
M478_4016	PF00999	Sodium/hydrogen exchanger family
M478_4016	PF02254	TrkA-N domain
M478_4017	PF07690	Major Facilitator Superfamily
M478_4019	PF00149	Calcineurin-like phosphoesterase
M478_402	PF05954	Phage late control gene D protein (GPD)
M478_4020	PF02872	5'-nucleotidase, C-terminal domain
M478_4023	PF04073	Aminoacyl-tRNA editing domain
M478_4024	PF01963	M478_4024
M478_4025	PF00122	E1-E2 ATPase
M478_4025	PF00403	Heavy-metal-associated domain
M478_4025	PF00702	haloacid dehalogenase-like hydrolase
M478_4026	PF13411	MerR HTH family regulatory protein
M478_4027	PF01957	NfeD-like C-terminal, partner-binding
M478_4028	PF01145	SPFH domain / Band 7 family
M478_4029	PF00085	Thioredoxin
M478_4029	PF14559	Tetratricopeptide repeat
M478_4029	PF14561	Tetratricopeptide repeat
M478_403	PF05488	PAAR motif
M478_4030	PF00106	short chain dehydrogenase
M478_4031	PF13472	GDSL-like Lipase/Acylhydrolase family
M478_4032	PF00005	ABC transporter
M478_4033	PF02687	M478_4033
M478_4034	PF02222	ATP-grasp domain
M478_4035	PF00731	AIR carboxylase
M478_4036	PF00149	Calcineurin-like phosphoesterase
M478_4037	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
M478_4038	PF01406	tRNA synthetases class I (C) catalytic domain
M478_4038	PF09190	DALR domain
M478_4040	PF13275	S4 domain
M478_4041	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
M478_4041	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
M478_4048	PF01066	CDP-alcohol phosphatidyltransferase
M478_4049	PF01148	Cytidylyltransferase family
M478_405	PF07024	ImpE protein
M478_4050	PF01553	Acyltransferase
M478_4051	PF12146	Putative lysophospholipase
M478_4051	PF12147	M478_4051
M478_4052	PF00782	Dual specificity phosphatase, catalytic domain
M478_4052	PF14378	M478_4052
M478_4055	PF01695	IstB-like ATP binding protein
M478_4056	PF00665	Integrase core domain
M478_4056	PF02796	Helix-turn-helix domain of resolvase
M478_4057	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_4057	PF03466	LysR substrate binding domain
M478_4058	PF00248	Aldo/keto reductase family
M478_4059	PF00248	Aldo/keto reductase family
M478_406	PF04965	Gene 25-like lysozyme
M478_4061	PF00933	Glycosyl hydrolase family 3 N terminal domain
M478_4061	PF01915	Glycosyl hydrolase family 3 C-terminal domain
M478_4061	PF14310	Fibronectin type III-like domain
M478_4062	PF14345	M478_4062
M478_4063	PF09925	M478_4063
M478_4063	PF14351	M478_4063
M478_4064	PF00872	M478_4064
M478_4066	PF11459	M478_4066
M478_4066	PF17194	M478_4066
M478_4067	PF03212	Pertactin
M478_4067	PF03797	Autotransporter beta-domain
M478_4070	PF05638	Protein of unknown function (DUF796)
M478_4071	PF06836	M478_4071
M478_4072	PF06836	M478_4072
M478_4075	PF13693	Winged helix-turn-helix DNA-binding
M478_4076	PF00905	Penicillin binding protein transpeptidase domain
M478_4076	PF00912	Transglycosylase
M478_4076	PF06832	M478_4076
M478_4078	PF01797	Transposase IS200 like
M478_4079	PF00207	Alpha-2-macroglobulin family
M478_4079	PF01835	MG2 domain
M478_4079	PF07703	Alpha-2-macroglobulin family N-terminal region
M478_4079	PF11974	Alpha-2-macroglobulin MG1 domain
M478_408	PF03831	PhnA protein
M478_408	PF08274	PhnA Zinc-Ribbon
M478_4081	PF07274	M478_4081
M478_4082	PF01380	SIS domain
M478_4082	PF01418	Helix-turn-helix domain, rpiR family
M478_4084	PF00171	Aldehyde dehydrogenase family
M478_4085	PF00205	Thiamine pyrophosphate enzyme, central domain
M478_4085	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M478_4085	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
M478_4086	PF01051	Initiator Replication protein
M478_4088	PF09084	NMT1/THI5 like
M478_4089	PF00149	Calcineurin-like phosphoesterase
M478_409	PF09972	M478_409
M478_4091	PF13476	AAA domain
M478_4094	PF01797	Transposase IS200 like
M478_41	PF02130	Uncharacterized protein family UPF0054
M478_410	PF04011	LemA family
M478_4100	PF03614	M478_4100
M478_4103	PF00270	DEAD/DEAH box helicase
M478_4103	PF00271	Helicase conserved C-terminal domain
M478_4104	PF02195	ParB-like nuclease domain
M478_4105	PF02195	ParB-like nuclease domain
M478_4106	PF00005	ABC transporter
M478_4111	PF03237	Terminase-like family
M478_4116	PF02368	Bacterial Ig-like domain (group 2)
M478_4122	PF02368	Bacterial Ig-like domain (group 2)
M478_4125	PF09718	M478_4125
M478_4126	PF05939	M478_4126
M478_4127	PF05100	M478_4127
M478_4128	PF00877	NlpC/P60 family
M478_4128	PF14464	Prokaryotic homologs of the JAB domain
M478_413	PF00005	ABC transporter
M478_4130	PF09327	M478_4130
M478_4130	PF12421	M478_4130
M478_4130	PF13550	M478_4130
M478_4131	PF14301	M478_4131
M478_4132	PF03335	Phage tail fibre repeat
M478_4132	PF03406	M478_4132
M478_4132	PF07484	Phage Tail Collar Domain
M478_4134	PF02413	M478_4134
M478_4135	PF00665	Integrase core domain
M478_4135	PF01695	IstB-like ATP binding protein
M478_4135	PF02796	Helix-turn-helix domain of resolvase
M478_4139	PF13643	M478_4139
M478_414	PF03379	M478_414
M478_4140	PF00872	M478_4140
M478_4141	PF01548	M478_4141
M478_4141	PF02371	M478_4141
M478_4143	PF13091	PLD-like domain
M478_4145	PF04754	M478_4145
M478_4146	PF00239	Resolvase, N terminal domain
M478_4147	PF05016	Plasmid stabilisation system protein
M478_4148	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
M478_4149	PF13614	AAA domain
M478_415	PF01578	M478_415
M478_4150	PF02195	ParB-like nuclease domain
M478_4150	PF08775	ParB family
M478_4151	PF13191	AAA ATPase domain
M478_4153	PF01555	DNA methylase
M478_4155	PF07128	M478_4155
M478_4157	PF07275	Antirestriction protein (ArdA)
M478_4158	PF06006	Bacterial protein of unknown function (DUF905)
M478_4159	PF02195	ParB-like nuclease domain
M478_416	PF04995	M478_416
M478_4160	PF00665	Integrase core domain
M478_4160	PF02796	Helix-turn-helix domain of resolvase
M478_4161	PF01695	IstB-like ATP binding protein
M478_4162	PF01068	ATP dependent DNA ligase domain
M478_4167	PF06445	GyrI-like small molecule binding domain
M478_4167	PF12833	Helix-turn-helix domain
M478_4168	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_4168	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_4169	PF00577	Outer membrane usher protein
M478_4169	PF13953	PapC C-terminal domain
M478_4169	PF13954	PapC N-terminal domain
M478_417	PF03100	CcmE
M478_4170	PF09255	Caf1 Capsule antigen
M478_4172	PF00589	Phage integrase family
M478_4174	PF06213	M478_4174
M478_4174	PF11775	M478_4174
M478_4175	PF07728	AAA domain (dynein-related subfamily)
M478_4176	PF02811	PHP domain
M478_4176	PF07733	Bacterial DNA polymerase III alpha subunit
M478_4176	PF14579	Helix-hairpin-helix motif
M478_418	PF01578	M478_418
M478_418	PF16327	M478_418
M478_4182	PF01367	5'-3' exonuclease, C-terminal SAM fold
M478_4182	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
M478_4184	PF00154	recA bacterial DNA recombination protein
M478_4186	PF01145	SPFH domain / Band 7 family
M478_4187	PF10765	Protein of unknown function (DUF2591)
M478_419	PF08534	Redoxin
M478_4194	PF05818	M478_4194
M478_4195	PF01527	Transposase
M478_4196	PF13276	M478_4196
M478_4197	PF13683	M478_4197
M478_4198	PF00376	MerR family regulatory protein
M478_4198	PF13614	AAA domain
M478_4199	PF02195	ParB-like nuclease domain
M478_42	PF02562	PhoH-like protein
M478_420	PF03918	Cytochrome C biogenesis protein
M478_4201	PF03693	Uncharacterised protein family (UPF0156)
M478_4202	PF05016	Plasmid stabilisation system protein
M478_4203	PF03545	Yersinia virulence determinant (YopE)
M478_4203	PF09020	YopE, N terminal
M478_4204	PF05932	Tir chaperone protein (CesT) family
M478_4205	PF13683	M478_4205
M478_4206	PF00665	Integrase core domain
M478_4207	PF01695	IstB-like ATP binding protein
M478_4208	PF05932	Tir chaperone protein (CesT) family
M478_4209	PF13276	M478_4209
M478_4209	PF13683	M478_4209
M478_421	PF14559	Tetratricopeptide repeat
M478_4210	PF01527	Transposase
M478_4213	PF00239	Resolvase, N terminal domain
M478_4213	PF02796	Helix-turn-helix domain of resolvase
M478_4215	PF01526	M478_4215
M478_4215	PF13700	M478_4215
M478_4218	PF03895	YadA-like C-terminal region
M478_4218	PF05658	Head domain of trimeric autotransporter adhesin
M478_4218	PF05662	Coiled stalk of trimeric autotransporter adhesin
M478_422	PF04333	M478_422
M478_4221	PF01527	Transposase
M478_4222	PF00665	Integrase core domain
M478_4223	PF13276	M478_4223
M478_4224	PF10723	Replication regulatory protein RepB
M478_4225	PF02387	M478_4225
M478_4229	PF13683	M478_4229
M478_423	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
M478_4232	PF00069	Protein kinase domain
M478_4232	PF09632	Rac1-binding domain
M478_4233	PF03421	M478_4233
M478_4234	PF13683	M478_4234
M478_4235	PF00102	Protein-tyrosine phosphatase
M478_4235	PF09013	YopH, N-terminal
M478_4236	PF13683	M478_4236
M478_4237	PF00665	Integrase core domain
M478_4237	PF02796	Helix-turn-helix domain of resolvase
M478_424	PF04175	Protein of unknown function (DUF406)
M478_4241	PF01527	Transposase
M478_4242	PF09013	YopH, N-terminal
M478_4243	PF02108	M478_4243
M478_4244	PF06578	M478_4244
M478_4245	PF01514	Secretory protein of YscJ/FliF family
M478_4246	PF17001	M478_4246
M478_4247	PF09025	YopR Core
M478_4248	PF09477	Bacterial type II secretion system chaperone protein (type_III_yscG)
M478_4249	PF09392	Type III secretion needle MxiH like
M478_425	PF00108	Thiolase, N-terminal domain
M478_425	PF02803	Thiolase, C-terminal domain
M478_4250	PF08988	Protein of unknown function (DUF1895)
M478_4251	PF16693	M478_4251
M478_4251	PF16697	M478_4251
M478_4252	PF00263	M478_4252
M478_4252	PF03958	Bacterial type II/III secretion system short domain
M478_4253	PF05932	Tir chaperone protein (CesT) family
M478_4254	PF02311	AraC-like ligand binding domain
M478_4254	PF12833	Helix-turn-helix domain
M478_4255	PF09619	Type III secretion system lipoprotein chaperone (YscW)
M478_4256	PF01312	FlhB HrpN YscU SpaS Family
M478_4257	PF01311	M478_4257
M478_4258	PF01313	M478_4258
M478_4259	PF00813	M478_4259
M478_426	PF00378	Enoyl-CoA hydratase/isomerase family
M478_426	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
M478_426	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
M478_4260	PF01052	Surface presentation of antigens (SPOA)
M478_4261	PF02120	Flagellar hook-length control protein FliK
M478_4262	PF07321	Type III secretion protein YscO
M478_4263	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
M478_4263	PF02874	ATP synthase alpha/beta family, beta-barrel domain
M478_4264	PF07201	HrpJ-like domain
M478_4265	PF09059	TyeA
M478_4267	PF09474	M478_4267
M478_4269	PF00771	FHIPEP family
M478_427	PF00300	Histidine phosphatase superfamily (branch 1)
M478_4270	PF09621	M478_4270
M478_4271	PF07216	M478_4271
M478_4272	PF04792	V antigen (LcrV) protein
M478_4273	PF07720	Tetratricopeptide repeat
M478_4274	PF04888	M478_4274
M478_4275	PF05844	YopD protein
M478_4277	PF12468	Type III secretion system leucine rich repeat protein
M478_4278	PF00872	M478_4278
M478_428	PF01713	Smr domain
M478_4281	PF05932	Tir chaperone protein (CesT) family
M478_4282	PF03543	Yersinia/Haemophilus virulence surface antigen
M478_4283	PF16754	M478_4283
M478_4284	PF16765	M478_4284
M478_4285	PF01815	Rop protein
M478_4286	PF01695	IstB-like ATP binding protein
M478_4287	PF00665	Integrase core domain
M478_4287	PF02796	Helix-turn-helix domain of resolvase
M478_4288	PF05973	M478_4288
M478_4289	PF13744	Helix-turn-helix domain
M478_429	PF05175	Methyltransferase small domain
M478_4290	PF01278	Omptin family
M478_43	PF00919	Uncharacterized protein family UPF0004
M478_43	PF01938	TRAM domain
M478_43	PF04055	Radical SAM superfamily
M478_430	PF01264	Chorismate synthase
M478_431	PF03411	Penicillin-insensitive murein endopeptidase
M478_432	PF01925	M478_432
M478_433	PF04315	M478_433
M478_434	PF08891	M478_434
M478_435	PF01266	FAD dependent oxidoreductase
M478_435	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
M478_436	PF00109	Beta-ketoacyl synthase, N-terminal domain
M478_436	PF02801	Beta-ketoacyl synthase, C-terminal domain
M478_437	PF01177	Asp/Glu/Hydantoin racemase
M478_438	PF00419	Fimbrial protein
M478_44	PF01494	FAD binding domain
M478_440	PF00892	EamA-like transporter family
M478_441	PF02311	AraC-like ligand binding domain
M478_441	PF12833	Helix-turn-helix domain
M478_442	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
M478_442	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
M478_442	PF11890	Domain of unknown function (DUF3410)
M478_443	PF01118	Semialdehyde dehydrogenase, NAD binding domain
M478_443	PF02774	Semialdehyde dehydrogenase, dimerisation domain
M478_444	PF01416	tRNA pseudouridine synthase
M478_445	PF09335	M478_445
M478_446	PF01039	Carboxyl transferase domain
M478_447	PF02875	Mur ligase family, glutamate ligase domain
M478_447	PF08245	Mur ligase middle domain
M478_448	PF05036	Sporulation related domain
M478_449	PF02674	M478_449
M478_450	PF00156	Phosphoribosyl transferase domain
M478_450	PF13522	Glutamine amidotransferase domain
M478_451	PF02441	Flavoprotein
M478_452	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_453	PF00528	Binding-protein-dependent transport system inner membrane component
M478_454	PF00528	Binding-protein-dependent transport system inner membrane component
M478_455	PF00005	ABC transporter
M478_456	PF01370	NAD dependent epimerase/dehydratase family
M478_456	PF08338	Domain of unknown function (DUF1731)
M478_457	PF00563	EAL domain
M478_458	PF12850	Calcineurin-like phosphoesterase superfamily domain
M478_459	PF00293	NUDIX domain
M478_460	PF03611	M478_460
M478_461	PF00872	M478_461
M478_462	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
M478_463	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
M478_464	PF00356	Bacterial regulatory proteins, lacI family
M478_464	PF13377	Periplasmic binding protein-like domain
M478_465	PF01515	Phosphate acetyl/butaryl transferase
M478_465	PF07085	DRTGG domain
M478_465	PF13500	AAA domain
M478_466	PF00871	Acetokinase family
M478_467	PF04217	M478_467
M478_468	PF03887	YfbU domain
M478_469	PF13419	Haloacid dehalogenase-like hydrolase
M478_470	PF02080	TrkA-C domain
M478_470	PF03600	Citrate transporter
M478_471	PF13023	HD domain
M478_472	PF00155	Aminotransferase class I and II
M478_473	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_473	PF03466	LysR substrate binding domain
M478_474	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
M478_475	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
M478_476	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
M478_476	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
M478_477	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
M478_478	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
M478_478	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
M478_479	PF00384	Molybdopterin oxidoreductase
M478_479	PF01568	Molydopterin dinucleotide binding domain
M478_479	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
M478_479	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
M478_479	PF13510	2Fe-2S iron-sulfur cluster binding domain
M478_480	PF00146	NADH dehydrogenase
M478_481	PF12838	4Fe-4S dicluster domain
M478_482	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
M478_483	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
M478_484	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
M478_484	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
M478_485	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
M478_486	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
M478_488	PF04074	Domain of unknown function (DUF386)
M478_489	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_490	PF01202	Shikimate kinase
M478_491	PF04074	Domain of unknown function (DUF386)
M478_492	PF02638	M478_492
M478_493	PF00356	Bacterial regulatory proteins, lacI family
M478_493	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
M478_494	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
M478_494	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
M478_495	PF07690	Major Facilitator Superfamily
M478_496	PF03928	Domain of unknown function (DUF336)
M478_497	PF00920	Dehydratase family
M478_499	PF05957	M478_499
M478_5	PF02653	M478_5
M478_501	PF00425	chorismate binding enzyme
M478_502	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M478_502	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
M478_502	PF16582	M478_502
M478_503	PF12697	Alpha/beta hydrolase family
M478_504	PF00378	Enoyl-CoA hydratase/isomerase family
M478_505	PF13378	Enolase C-terminal domain-like
M478_506	PF00501	AMP-binding enzyme
M478_507	PF00591	Glycosyl transferase family, a/b domain
M478_507	PF02885	Glycosyl transferase family, helical bundle domain
M478_508	PF07338	Protein of unknown function (DUF1471)
M478_509	PF05971	Protein of unknown function (DUF890)
M478_51	PF00733	Asparagine synthase
M478_51	PF13537	Glutamine amidotransferase domain
M478_510	PF01695	IstB-like ATP binding protein
M478_511	PF00665	Integrase core domain
M478_511	PF02796	Helix-turn-helix domain of resolvase
M478_512	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_512	PF08448	PAS fold
M478_512	PF13426	PAS domain
M478_513	PF00005	ABC transporter
M478_514	PF00528	Binding-protein-dependent transport system inner membrane component
M478_515	PF00497	Bacterial extracellular solute-binding proteins, family 3
M478_516	PF02698	DUF218 domain
M478_517	PF00210	Ferritin-like domain
M478_518	PF13649	Methyltransferase domain
M478_519	PF00583	Acetyltransferase (GNAT) family
M478_52	PF13242	HAD-hyrolase-like
M478_52	PF13344	Haloacid dehalogenase-like hydrolase
M478_520	PF00892	EamA-like transporter family
M478_521	PF13505	Outer membrane protein beta-barrel domain
M478_522	PF01545	Cation efflux family
M478_523	PF16809	M478_523
M478_524	PF16809	M478_524
M478_525	PF00107	Zinc-binding dehydrogenase
M478_525	PF08240	Alcohol dehydrogenase GroES-like domain
M478_526	PF13407	Periplasmic binding protein domain
M478_527	PF00005	ABC transporter
M478_528	PF02653	M478_528
M478_529	PF00356	Bacterial regulatory proteins, lacI family
M478_529	PF13407	Periplasmic binding protein domain
M478_53	PF00480	ROK family
M478_53	PF01047	MarR family
M478_530	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_530	PF03466	LysR substrate binding domain
M478_531	PF00180	Isocitrate/isopropylmalate dehydrogenase
M478_532	PF02028	BCCT family transporter
M478_533	PF00355	Rieske [2Fe-2S] domain
M478_533	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
M478_534	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
M478_535	PF00111	2Fe-2S iron-sulfur cluster binding domain
M478_535	PF00175	Oxidoreductase NAD-binding domain
M478_535	PF00970	Oxidoreductase FAD-binding domain
M478_536	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
M478_536	PF08479	POTRA domain, ShlB-type
M478_536	PF17287	M478_536
M478_537	PF04829	M478_537
M478_537	PF05594	M478_537
M478_537	PF05860	haemagglutination activity domain
M478_537	PF13018	M478_537
M478_537	PF13332	M478_537
M478_538	PF10004	M478_538
M478_54	PF01979	Amidohydrolase family
M478_540	PF04829	M478_540
M478_542	PF14106	M478_542
M478_545	PF00005	ABC transporter
M478_545	PF08402	TOBE domain
M478_546	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
M478_546	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
M478_546	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
M478_546	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
M478_547	PF00356	Bacterial regulatory proteins, lacI family
M478_547	PF13377	Periplasmic binding protein-like domain
M478_548	PF13416	Bacterial extracellular solute-binding protein
M478_549	PF00528	Binding-protein-dependent transport system inner membrane component
M478_55	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
M478_550	PF00528	Binding-protein-dependent transport system inner membrane component
M478_551	PF04041	Domain of unknown function (DUF377)
M478_552	PF08950	Protein of unknown function (DUF1861)
M478_555	PF00924	Mechanosensitive ion channel
M478_556	PF01867	CRISPR associated protein Cas1
M478_558	PF09611	M478_558
M478_559	PF09614	M478_559
M478_56	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
M478_56	PF00367	phosphotransferase system, EIIB
M478_56	PF02378	Phosphotransferase system, EIIC
M478_560	PF09615	M478_560
M478_561	PF09618	CRISPR-associated protein (Cas_Csy4)
M478_562	PF00248	Aldo/keto reductase family
M478_563	PF08714	Formaldehyde-activating enzyme (Fae)
M478_564	PF00083	Sugar (and other) transporter
M478_566	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_566	PF03466	LysR substrate binding domain
M478_567	PF00765	Autoinducer synthetase
M478_568	PF00196	Bacterial regulatory proteins, luxR family
M478_568	PF03472	Autoinducer binding domain
M478_569	PF00892	EamA-like transporter family
M478_57	PF01797	Transposase IS200 like
M478_571	PF00581	Rhodanese-like domain
M478_571	PF12368	M478_571
M478_572	PF01594	M478_572
M478_573	PF00196	Bacterial regulatory proteins, luxR family
M478_574	PF01266	FAD dependent oxidoreductase
M478_575	PF00872	M478_575
M478_576	PF00872	M478_576
M478_577	PF00872	M478_577
M478_578	PF03992	Antibiotic biosynthesis monooxygenase
M478_579	PF01979	Amidohydrolase family
M478_58	PF00749	tRNA synthetases class I (E and Q), catalytic domain
M478_58	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
M478_580	PF06183	DinI-like family
M478_581	PF00872	M478_581
M478_582	PF13991	M478_582
M478_583	PF00575	S1 RNA binding domain
M478_583	PF10150	Ribonuclease E/G family
M478_583	PF12111	Polyribonucleotide phosphorylase C terminal
M478_584	PF00849	RNA pseudouridylate synthase
M478_584	PF01479	S4 domain
M478_585	PF02545	Maf-like protein
M478_586	PF02620	M478_586
M478_587	PF01783	Ribosomal L32p protein family
M478_588	PF02504	Fatty acid synthesis protein
M478_589	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
M478_589	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
M478_59	PF03573	outer membrane porin, OprD family
M478_590	PF00698	Acyl transferase domain
M478_591	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_592	PF00550	Phosphopantetheine attachment site
M478_593	PF00109	Beta-ketoacyl synthase, N-terminal domain
M478_593	PF02801	Beta-ketoacyl synthase, C-terminal domain
M478_594	PF01797	Transposase IS200 like
M478_595	PF01063	Aminotransferase class IV
M478_596	PF02618	YceG-like family
M478_597	PF02223	Thymidylate kinase
M478_598	PF09115	DNA polymerase III, delta subunit, C terminal
M478_598	PF13177	DNA polymerase III, delta subunit
M478_599	PF01026	TatD related DNase
M478_6	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_6	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
M478_60	PF03173	Putative carbohydrate binding domain
M478_600	PF00367	phosphotransferase system, EIIB
M478_600	PF02378	Phosphotransferase system, EIIC
M478_602	PF01695	IstB-like ATP binding protein
M478_605	PF02796	Helix-turn-helix domain of resolvase
M478_606	PF08501	Shikimate dehydrogenase substrate binding domain
M478_607	PF01230	HIT domain
M478_608	PF07233	Protein of unknown function (DUF1425)
M478_609	PF13036	Protein of unknown function (DUF3897)
M478_61	PF00728	Glycosyl hydrolase family 20, catalytic domain
M478_61	PF02838	Glycosyl hydrolase family 20, domain 2
M478_61	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
M478_610	PF01636	Phosphotransferase enzyme family
M478_611	PF00933	Glycosyl hydrolase family 3 N terminal domain
M478_612	PF05728	Uncharacterised protein family (UPF0227)
M478_613	PF07992	Pyridine nucleotide-disulphide oxidoreductase
M478_616	PF00872	M478_616
M478_617	PF05433	M478_617
M478_618	PF00270	DEAD/DEAH box helicase
M478_618	PF00271	Helicase conserved C-terminal domain
M478_618	PF02559	CarD-like/TRCF domain
M478_618	PF03461	TRCF domain
M478_619	PF02687	M478_619
M478_619	PF12704	MacB-like periplasmic core domain
M478_62	PF01475	Ferric uptake regulator family
M478_620	PF00005	ABC transporter
M478_621	PF02687	M478_621
M478_621	PF12704	MacB-like periplasmic core domain
M478_622	PF00480	ROK family
M478_623	PF02146	Sir2 family
M478_624	PF01546	Peptidase family M20/M25/M40
M478_624	PF07687	Peptidase dimerisation domain
M478_625	PF08007	Cupin superfamily protein
M478_626	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_626	PF08918	PhoQ Sensor
M478_627	PF00072	Response regulator receiver domain
M478_627	PF00486	Transcriptional regulatory protein, C terminal
M478_628	PF13505	Outer membrane protein beta-barrel domain
M478_629	PF00206	Lyase
M478_629	PF08328	Adenylosuccinate lyase C-terminal
M478_63	PF00258	Flavodoxin
M478_630	PF04356	Protein of unknown function (DUF489)
M478_631	PF03054	tRNA methyl transferase
M478_632	PF00293	NUDIX domain
M478_633	PF00849	RNA pseudouridylate synthase
M478_634	PF00180	Isocitrate/isopropylmalate dehydrogenase
M478_635	PF00356	Bacterial regulatory proteins, lacI family
M478_635	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
M478_637	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_637	PF08447	PAS fold
M478_638	PF05368	NmrA-like family
M478_639	PF01638	HxlR-like helix-turn-helix
M478_64	PF01402	Ribbon-helix-helix protein, copG family
M478_641	PF00328	Histidine phosphatase superfamily (branch 2)
M478_642	PF14001	M478_642
M478_643	PF11004	M478_643
M478_644	PF01037	AsnC family
M478_644	PF13412	Winged helix-turn-helix DNA-binding
M478_645	PF10777	M478_645
M478_646	PF00107	Zinc-binding dehydrogenase
M478_646	PF08240	Alcohol dehydrogenase GroES-like domain
M478_647	PF00703	Glycosyl hydrolases family 2
M478_647	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
M478_647	PF02837	Glycosyl hydrolases family 2, sugar binding domain
M478_647	PF02929	Beta galactosidase small chain
M478_647	PF16353	M478_647
M478_648	PF00313	'Cold-shock' DNA-binding domain
M478_649	PF10781	M478_649
M478_650	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_651	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_651	PF02203	Tar ligand binding domain homologue
M478_652	PF02308	M478_652
M478_653	PF00122	E1-E2 ATPase
M478_653	PF00689	Cation transporting ATPase, C-terminus
M478_653	PF00690	Cation transporter/ATPase, N-terminus
M478_653	PF00702	haloacid dehalogenase-like hydrolase
M478_654	PF05247	Flagellar transcriptional activator (FlhD)
M478_655	PF05280	Flagellar transcriptional activator (FlhC)
M478_656	PF01618	M478_656
M478_657	PF00691	OmpA family
M478_657	PF13677	M478_657
M478_658	PF01584	CheW-like domain
M478_658	PF01627	Hpt domain
M478_658	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_658	PF02895	Signal transducing histidine kinase, homodimeric domain
M478_658	PF09078	CheY binding
M478_659	PF01584	CheW-like domain
M478_66	PF12697	Alpha/beta hydrolase family
M478_660	PF07690	Major Facilitator Superfamily
M478_661	PF01042	Endoribonuclease L-PSP
M478_662	PF01261	Xylose isomerase-like TIM barrel
M478_663	PF08348	M478_663
M478_663	PF13309	M478_663
M478_666	PF10101	M478_666
M478_668	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_668	PF00672	HAMP domain
M478_668	PF02203	Tar ligand binding domain homologue
M478_669	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
M478_669	PF00672	HAMP domain
M478_669	PF02203	Tar ligand binding domain homologue
M478_670	PF01739	CheR methyltransferase, SAM binding domain
M478_670	PF03705	CheR methyltransferase, all-alpha domain
M478_671	PF00072	Response regulator receiver domain
M478_671	PF01339	CheB methylesterase
M478_672	PF00072	Response regulator receiver domain
M478_673	PF04344	Chemotaxis phosphatase, CheZ
M478_674	PF01510	N-acetylmuramoyl-L-alanine amidase
M478_675	PF05658	Head domain of trimeric autotransporter adhesin
M478_675	PF05662	Coiled stalk of trimeric autotransporter adhesin
M478_676	PF03895	YadA-like C-terminal region
M478_676	PF05662	Coiled stalk of trimeric autotransporter adhesin
M478_679	PF00842	Alanine racemase, C-terminal domain
M478_679	PF01168	Alanine racemase, N-terminal domain
M478_68	PF01527	Transposase
M478_682	PF01734	Patatin-like phospholipase
M478_685	PF01695	IstB-like ATP binding protein
M478_686	PF00665	Integrase core domain
M478_686	PF02796	Helix-turn-helix domain of resolvase
M478_687	PF04266	ASCH domain
M478_688	PF07351	M478_688
M478_689	PF05229	M478_689
M478_69	PF13356	Domain of unknown function (DUF4102)
M478_690	PF00577	Outer membrane usher protein
M478_690	PF13953	PapC C-terminal domain
M478_691	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_692	PF05229	M478_692
M478_693	PF05229	M478_693
M478_694	PF05229	M478_694
M478_695	PF02470	M478_695
M478_696	PF04403	M478_696
M478_697	PF13185	GAF domain
M478_698	PF04352	ProQ/FINO family
M478_698	PF17516	M478_698
M478_699	PF00595	PDZ domain (Also known as DHR or GLGF)
M478_699	PF03572	Peptidase family S41
M478_699	PF11818	M478_699
M478_7	PF00294	pfkB family carbohydrate kinase
M478_7	PF09863	Uncharacterized protein conserved in bacteria (DUF2090)
M478_70	PF01695	IstB-like ATP binding protein
M478_701	PF01435	Peptidase family M48
M478_702	PF16970	M478_702
M478_703	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_703	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_704	PF00577	Outer membrane usher protein
M478_704	PF13953	PapC C-terminal domain
M478_704	PF13954	PapC N-terminal domain
M478_705	PF00419	Fimbrial protein
M478_706	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
M478_706	PF02753	Pili assembly chaperone PapD, C-terminal domain
M478_707	PF07690	Major Facilitator Superfamily
M478_708	PF14583	Oligogalacturonate lyase
M478_709	PF01614	Bacterial transcriptional regulator
M478_709	PF09339	IclR helix-turn-helix domain
M478_71	PF00665	Integrase core domain
M478_71	PF02796	Helix-turn-helix domain of resolvase
M478_710	PF01471	Putative peptidoglycan binding domain
M478_710	PF01510	N-acetylmuramoyl-L-alanine amidase
M478_711	PF00375	Sodium:dicarboxylate symporter family
M478_712	PF04307	M478_712
M478_713	PF06178	Oligogalacturonate-specific porin protein (KdgM)
M478_714	PF01547	Bacterial extracellular solute-binding protein
M478_715	PF00005	ABC transporter
M478_716	PF00528	Binding-protein-dependent transport system inner membrane component
M478_717	PF00528	Binding-protein-dependent transport system inner membrane component
M478_718	PF06917	Periplasmic pectate lyase
M478_719	PF13561	Enoyl-(Acyl carrier protein) reductase
M478_72	PF01522	Polysaccharide deacetylase
M478_720	PF04962	KduI/IolB family
M478_721	PF07883	Cupin domain
M478_722	PF00872	M478_722
M478_723	PF13419	Haloacid dehalogenase-like hydrolase
M478_724	PF14002	M478_724
M478_725	PF03881	Fructosamine kinase
M478_726	PF00950	M478_726
M478_727	PF00950	M478_727
M478_728	PF00005	ABC transporter
M478_729	PF01297	Periplasmic solute binding protein family
M478_73	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
M478_730	PF01464	Transglycosylase SLT domain
M478_731	PF01914	M478_731
M478_733	PF13619	M478_733
M478_734	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
M478_734	PF02824	TGS domain
M478_734	PF03129	Anticodon binding domain
M478_734	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
M478_735	PF00707	Translation initiation factor IF-3, C-terminal domain
M478_736	PF01632	Ribosomal protein L35
M478_737	PF00453	Ribosomal protein L20
M478_738	PF01409	tRNA synthetases class II core domain (F)
M478_738	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
M478_739	PF01588	Putative tRNA binding domain
M478_739	PF03147	Ferredoxin-fold anticodon binding domain
M478_739	PF03483	B3/4 domain
M478_739	PF03484	tRNA synthetase B5 domain
M478_74	PF00528	Binding-protein-dependent transport system inner membrane component
M478_740	PF00216	Bacterial DNA-binding protein
M478_741	PF10697	M478_741
M478_742	PF01032	FecCD transport family
M478_743	PF00255	Glutathione peroxidase
M478_744	PF00005	ABC transporter
M478_745	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
M478_746	PF00535	Glycosyl transferase family 2
M478_747	PF00551	Formyl transferase
M478_747	PF01370	NAD dependent epimerase/dehydratase family
M478_747	PF02911	Formyl transferase, C-terminal domain
M478_748	PF01522	Polysaccharide deacetylase
M478_749	PF02366	M478_749
M478_75	PF00005	ABC transporter
M478_75	PF00571	CBS domain
M478_750	PF00892	EamA-like transporter family
M478_752	PF00877	NlpC/P60 family
M478_753	PF03099	Biotin/lipoate A/B protein ligase family
M478_753	PF10437	Bacterial lipoate protein ligase C-terminus
M478_754	PF02696	M478_754
M478_755	PF02696	M478_755
M478_756	PF00793	DAHP synthetase I family
M478_757	PF03618	M478_757
M478_758	PF00391	PEP-utilising enzyme, mobile domain
M478_758	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
M478_758	PF02896	PEP-utilising enzyme, TIM barrel domain
M478_759	PF01594	M478_759
M478_76	PF00268	Ribonucleotide reductase, small chain
M478_760	PF01565	FAD binding domain
M478_760	PF02913	FAD linked oxidases, C-terminal domain
M478_760	PF13183	4Fe-4S dicluster domain
M478_761	PF03061	Thioesterase superfamily
M478_762	PF01521	Iron-sulphur cluster biosynthesis
M478_763	PF01458	Uncharacterized protein family (UPF0051)
M478_764	PF00005	ABC transporter
M478_765	PF01458	Uncharacterized protein family (UPF0051)
M478_766	PF00266	Aminotransferase class-V
M478_767	PF02657	Fe-S metabolism associated domain
M478_768	PF03734	L,D-transpeptidase catalytic domain
M478_769	PF01695	IstB-like ATP binding protein
M478_77	PF00317	Ribonucleotide reductase, all-alpha domain
M478_77	PF02867	Ribonucleotide reductase, barrel domain
M478_77	PF08343	Ribonucleotide reductase N-terminal
M478_771	PF00665	Integrase core domain
M478_772	PF02796	Helix-turn-helix domain of resolvase
M478_774	PF04728	Lipoprotein leucine-zipper
M478_775	PF00224	Pyruvate kinase, barrel domain
M478_775	PF02887	Pyruvate kinase, alpha/beta domain
M478_778	PF01554	MatE
M478_779	PF00677	Lumazine binding domain
M478_78	PF07972	NrdI Flavodoxin like
M478_780	PF02353	Mycolic acid cyclopropane synthetase
M478_781	PF07690	Major Facilitator Superfamily
M478_782	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_782	PF03466	LysR substrate binding domain
M478_783	PF00356	Bacterial regulatory proteins, lacI family
M478_783	PF13377	Periplasmic binding protein-like domain
M478_785	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
M478_785	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
M478_786	PF00877	NlpC/P60 family
M478_788	PF00462	Glutaredoxin
M478_789	PF00929	Exonuclease
M478_79	PF00462	Glutaredoxin
M478_790	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
M478_791	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
M478_792	PF00440	Bacterial regulatory proteins, tetR family
M478_792	PF16925	M478_792
M478_793	PF00884	Sulfatase
M478_793	PF08019	M478_793
M478_794	PF01047	MarR family
M478_795	PF05433	M478_795
M478_796	PF03702	Uncharacterised protein family (UPF0075)
M478_797	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
M478_798	PF01243	Pyridoxamine 5'-phosphate oxidase
M478_798	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
M478_799	PF00579	tRNA synthetases class I (W and Y)
M478_799	PF01479	S4 domain
M478_8	PF01261	Xylose isomerase-like TIM barrel
M478_80	PF06392	M478_80
M478_800	PF08543	Phosphomethylpyrimidine kinase
M478_801	PF00043	Glutathione S-transferase, C-terminal domain
M478_801	PF02798	Glutathione S-transferase, N-terminal domain
M478_802	PF11656	M478_802
M478_803	PF06930	M478_803
M478_804	PF00854	POT family
M478_807	PF00005	ABC transporter
M478_808	PF00005	ABC transporter
M478_808	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
M478_809	PF00528	Binding-protein-dependent transport system inner membrane component
M478_809	PF12911	M478_809
M478_81	PF09400	Protein of unknown function (DUF2002)
M478_810	PF00528	Binding-protein-dependent transport system inner membrane component
M478_811	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_812	PF01797	Transposase IS200 like
M478_813	PF00158	Sigma-54 interaction domain
M478_813	PF02954	Bacterial regulatory protein, Fis family
M478_814	PF04012	M478_814
M478_815	PF06667	M478_815
M478_816	PF04024	M478_816
M478_817	PF09584	M478_817
M478_818	PF04317	M478_818
M478_819	PF05128	M478_819
M478_82	PF06711	M478_82
M478_820	PF08808	M478_820
M478_821	PF09722	M478_821
M478_822	PF00158	Sigma-54 interaction domain
M478_822	PF00989	PAS fold
M478_823	PF01797	Transposase IS200 like
M478_824	PF08534	Redoxin
M478_825	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
M478_825	PF13378	Enolase C-terminal domain-like
M478_826	PF00246	Zinc carboxypeptidase
M478_827	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_828	PF01544	CorA-like Mg2+ transporter protein
M478_829	PF13411	MerR HTH family regulatory protein
M478_83	PF04899	M478_83
M478_830	PF07859	alpha/beta hydrolase fold
M478_832	PF01171	PP-loop family
M478_833	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
M478_833	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
M478_833	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M478_833	PF10371	Domain of unknown function
M478_833	PF12838	4Fe-4S dicluster domain
M478_833	PF17147	M478_833
M478_834	PF00893	Small Multidrug Resistance protein
M478_835	PF02308	M478_835
M478_836	PF03891	M478_836
M478_837	PF03724	META domain
M478_838	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
M478_838	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
M478_839	PF11739	M478_839
M478_84	PF00313	'Cold-shock' DNA-binding domain
M478_840	PF13617	M478_840
M478_841	PF07027	M478_841
M478_842	PF01232	Mannitol dehydrogenase Rossmann domain
M478_842	PF08125	Mannitol dehydrogenase C-terminal domain
M478_843	PF04198	Putative sugar-binding domain
M478_844	PF02525	Flavodoxin-like fold
M478_845	PF00270	DEAD/DEAH box helicase
M478_845	PF00271	Helicase conserved C-terminal domain
M478_845	PF04408	Helicase associated domain (HA2)
M478_845	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
M478_845	PF11898	M478_845
M478_846	PF05973	M478_846
M478_847	PF01381	Helix-turn-helix
M478_848	PF00089	Trypsin
M478_85	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_850	PF01292	Prokaryotic cytochrome b561
M478_852	PF03497	Anthrax toxin LF subunit
M478_853	PF01695	IstB-like ATP binding protein
M478_855	PF00665	Integrase core domain
M478_855	PF02796	Helix-turn-helix domain of resolvase
M478_856	PF00171	Aldehyde dehydrogenase family
M478_856	PF00465	Iron-containing alcohol dehydrogenase
M478_857	PF01914	M478_857
M478_858	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
M478_859	PF00528	Binding-protein-dependent transport system inner membrane component
M478_86	PF00528	Binding-protein-dependent transport system inner membrane component
M478_860	PF00528	Binding-protein-dependent transport system inner membrane component
M478_860	PF12911	M478_860
M478_861	PF00005	ABC transporter
M478_861	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
M478_862	PF00005	ABC transporter
M478_862	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
M478_864	PF04269	Protein of unknown function, DUF440
M478_865	PF13091	PLD-like domain
M478_865	PF13396	M478_865
M478_866	PF13505	Outer membrane protein beta-barrel domain
M478_868	PF13453	M478_868
M478_869	PF03795	YCII-related domain
M478_87	PF00528	Binding-protein-dependent transport system inner membrane component
M478_871	PF03544	Gram-negative bacterial TonB protein C-terminal
M478_871	PF16031	M478_871
M478_872	PF00872	M478_872
M478_873	PF03061	Thioesterase superfamily
M478_874	PF04279	M478_874
M478_875	PF00916	M478_875
M478_876	PF01740	STAS domain
M478_877	PF06790	M478_877
M478_878	PF03922	OmpW family
M478_879	PF04972	BON domain
M478_88	PF00005	ABC transporter
M478_880	PF00290	Tryptophan synthase alpha chain
M478_881	PF00291	Pyridoxal-phosphate dependent enzyme
M478_882	PF00218	Indole-3-glycerol phosphate synthase
M478_882	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
M478_883	PF00591	Glycosyl transferase family, a/b domain
M478_883	PF02885	Glycosyl transferase family, helical bundle domain
M478_884	PF00117	Glutamine amidotransferase class-I
M478_885	PF00425	chorismate binding enzyme
M478_885	PF04715	Anthranilate synthase component I, N terminal region
M478_887	PF01300	Telomere recombination
M478_888	PF00849	RNA pseudouridylate synthase
M478_888	PF01479	S4 domain
M478_889	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
M478_889	PF12557	Cob(I)alamin adenosyltransferase N terminal
M478_89	PF00005	ABC transporter
M478_890	PF00106	short chain dehydrogenase
M478_891	PF01343	Peptidase family S49
M478_891	PF08496	M478_891
M478_892	PF10692	Protein of unknown function (DUF2498)
M478_894	PF01131	DNA topoisomerase
M478_894	PF01396	M478_894
M478_894	PF01751	Toprim domain
M478_894	PF08272	Topoisomerase I zinc-ribbon-like
M478_895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_895	PF03466	LysR substrate binding domain
M478_897	PF00330	Aconitase family (aconitate hydratase)
M478_897	PF00694	Aconitase C-terminal domain
M478_898	PF00925	GTP cyclohydrolase II
M478_899	PF01569	PAP2 superfamily
M478_9	PF04962	KduI/IolB family
M478_900	PF06305	M478_900
M478_901	PF13176	Tetratricopeptide repeat
M478_901	PF13432	Tetratricopeptide repeat
M478_903	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
M478_904	PF01253	Translation initiation factor SUI1
M478_905	PF05433	M478_905
M478_906	PF00596	Class II Aldolase and Adducin N-terminal domain
M478_907	PF09932	M478_907
M478_908	PF00923	Transaldolase
M478_909	PF04328	M478_909
M478_91	PF00547	Urease, gamma subunit
M478_910	PF02554	M478_910
M478_910	PF13722	M478_910
M478_911	PF00575	S1 RNA binding domain
M478_911	PF00773	RNB domain
M478_911	PF08206	Ribonuclease B OB domain
M478_912	PF07690	Major Facilitator Superfamily
M478_913	PF01370	NAD dependent epimerase/dehydratase family
M478_914	PF00633	Helix-hairpin-helix motif
M478_914	PF00730	HhH-GPD superfamily base excision DNA repair protein
M478_914	PF10576	Iron-sulfur binding domain of endonuclease III
M478_915	PF02508	M478_915
M478_916	PF04205	FMN-binding domain
M478_917	PF03116	M478_917
M478_918	PF06445	GyrI-like small molecule binding domain
M478_918	PF12833	Helix-turn-helix domain
M478_919	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
M478_919	PF10531	SLBB domain
M478_919	PF13237	4Fe-4S dicluster domain
M478_919	PF13375	RnfC Barrel sandwich hybrid domain
M478_92	PF00699	Urease beta subunit
M478_920	PF04060	Putative Fe-S cluster
M478_920	PF14697	4Fe-4S dicluster domain
M478_921	PF02508	M478_921
M478_922	PF10754	M478_922
M478_923	PF00005	ABC transporter
M478_923	PF00664	ABC transporter transmembrane region
M478_924	PF13533	Biotin-lipoyl like
M478_925	PF00529	HlyD family secretion protein
M478_926	PF00005	ABC transporter
M478_926	PF00664	ABC transporter transmembrane region
M478_926	PF03412	Peptidase C39 family
M478_928	PF02610	L-arabinose isomerase
M478_928	PF11762	L-arabinose isomerase C-terminal domain
M478_929	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
M478_929	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
M478_93	PF00449	Urease alpha-subunit, N-terminal domain
M478_93	PF01979	Amidohydrolase family
M478_930	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
M478_931	PF00005	ABC transporter
M478_932	PF02653	M478_932
M478_933	PF02311	AraC-like ligand binding domain
M478_933	PF12833	Helix-turn-helix domain
M478_934	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
M478_934	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
M478_935	PF13593	SBF-like CPA transporter family (DUF4137)
M478_937	PF06097	M478_937
M478_938	PF01238	Phosphomannose isomerase type I
M478_939	PF00206	Lyase
M478_939	PF10415	Fumarase C C-terminus
M478_94	PF02814	UreE urease accessory protein, N-terminal domain
M478_94	PF05194	UreE urease accessory protein, C-terminal domain
M478_940	PF05472	DNA replication terminus site-binding protein (Ter protein)
M478_941	PF07690	Major Facilitator Superfamily
M478_942	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_942	PF03466	LysR substrate binding domain
M478_943	PF00480	ROK family
M478_945	PF13500	AAA domain
M478_946	PF00654	Voltage gated chloride channel
M478_947	PF00356	Bacterial regulatory proteins, lacI family
M478_947	PF13377	Periplasmic binding protein-like domain
M478_949	PF13407	Periplasmic binding protein domain
M478_95	PF01730	UreF
M478_950	PF13379	NMT1-like family
M478_951	PF00528	Binding-protein-dependent transport system inner membrane component
M478_952	PF00005	ABC transporter
M478_953	PF01048	Phosphorylase superfamily
M478_953	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
M478_955	PF07520	M478_955
M478_956	PF10139	M478_956
M478_957	PF07313	Protein of unknown function (DUF1460)
M478_958	PF00205	Thiamine pyrophosphate enzyme, central domain
M478_958	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
M478_958	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
M478_959	PF13710	ACT domain
M478_96	PF02492	CobW/HypB/UreG, nucleotide-binding domain
M478_960	PF13419	Haloacid dehalogenase-like hydrolase
M478_961	PF13208	M478_961
M478_961	PF15615	M478_961
M478_962	PF00245	Alkaline phosphatase
M478_963	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
M478_963	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
M478_964	PF00027	Cyclic nucleotide-binding domain
M478_964	PF13545	Crp-like helix-turn-helix domain
M478_965	PF00582	Universal stress protein family
M478_966	PF02233	NAD(P) transhydrogenase beta subunit
M478_967	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
M478_967	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
M478_967	PF12769	Domain of unknown function (DUF3814)
M478_968	PF07338	Protein of unknown function (DUF1471)
M478_969	PF13520	Amino acid permease
M478_97	PF01774	UreD urease accessory protein
M478_971	PF00072	Response regulator receiver domain
M478_971	PF00486	Transcriptional regulatory protein, C terminal
M478_972	PF00512	His Kinase A (phospho-acceptor) domain
M478_972	PF00672	HAMP domain
M478_972	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
M478_973	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
M478_974	PF01797	Transposase IS200 like
M478_979	PF01695	IstB-like ATP binding protein
M478_98	PF03253	Urea transporter
M478_980	PF00265	Thymidine kinase
M478_981	PF00816	H-NS histone family
M478_982	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
M478_982	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
M478_982	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
M478_983	PF00072	Response regulator receiver domain
M478_984	PF02810	SEC-C motif
M478_985	PF00872	M478_985
M478_986	PF00551	Formyl transferase
M478_986	PF01842	ACT domain
M478_99	PF03824	M478_99
M478_990	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
M478_991	PF03372	Endonuclease/Exonuclease/phosphatase family
M478_992	PF00293	NUDIX domain
M478_993	PF07383	M478_993
M478_994	PF01131	DNA topoisomerase
M478_994	PF01751	Toprim domain
M478_995	PF00586	AIR synthase related protein, N-terminal domain
M478_995	PF02769	AIR synthase related protein, C-terminal domain
M478_996	PF00881	Nitroreductase family
M478_997	PF01343	Peptidase family S49
M478_998	PF00710	Asparaginase
M478_999	PF00857	Isochorismatase family