locus-tag class description M483_1 PF00155 Aminotransferase class I and II M483_1 PF00392 Bacterial regulatory proteins, gntR family M483_10 PF07411 Domain of unknown function (DUF1508) M483_100 PF01797 Transposase IS200 like M483_1001 PF00542 Ribosomal protein L7/L12 C-terminal domain M483_1001 PF16320 Ribosomal protein L7/L12 dimerisation domain M483_1002 PF00466 Ribosomal protein L10 M483_1003 PF00687 Ribosomal protein L1p/L10e family M483_1004 PF03946 Ribosomal protein L11, N-terminal domain M483_1004 PF00298 Ribosomal protein L11, RNA binding domain M483_1005 PF00467 KOW motif M483_1005 PF02357 Transcription termination factor nusG M483_1006 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M483_1007 PF00009 Elongation factor Tu GTP binding domain M483_1007 PF03144 Elongation factor Tu domain 2 M483_1007 PF03143 Elongation factor Tu C-terminal domain M483_101 PF04310 MukB N-terminal M483_101 PF16330 MukB hinge domain M483_1012 PF01695 IstB-like ATP binding protein M483_1013 PF01695 IstB-like ATP binding protein M483_1014 PF00665 Integrase core domain M483_1014 PF02796 Helix-turn-helix domain of resolvase M483_1015 PF12146 Serine aminopeptidase, S33 M483_1016 PF00324 Amino acid permease M483_1017 PF00221 Aromatic amino acid lyase M483_1018 PF17391 Urocanase N-terminal domain M483_1018 PF17392 Urocanase C-terminal domain M483_1018 PF01175 Urocanase Rossmann-like domain M483_1019 PF00291 Pyridoxal-phosphate dependent enzyme M483_102 PF04288 MukE-like family M483_1020 PF00156 Phosphoribosyl transferase domain M483_1023 PF01497 Periplasmic binding protein M483_1024 PF01032 FecCD transport family M483_1025 PF01032 FecCD transport family M483_1027 PF00005 ABC transporter M483_103 PF03882 MukF winged-helix domain M483_103 PF17192 MukF middle domain M483_103 PF17193 MukF C-terminal domain M483_1030 PF13737 Transposase DDE domain M483_1031 PF13737 Transposase DDE domain M483_1032 PF04606 Ogr/Delta-like zinc finger M483_1034 PF00589 Phage integrase family M483_1034 PF14659 Phage integrase, N-terminal SAM-like domain M483_1034 PF13356 Arm DNA-binding domain M483_1036 PF12833 Helix-turn-helix domain M483_1037 PF02653 Branched-chain amino acid transport system / permease component M483_1038 PF00005 ABC transporter M483_1039 PF13407 Periplasmic binding protein domain M483_1041 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_1041 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_1043 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_1043 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_1044 PF13954 PapC N-terminal domain M483_1044 PF00577 Outer membrane usher protein M483_1044 PF13953 PapC C-terminal domain M483_1045 PF00577 Outer membrane usher protein M483_1045 PF13954 PapC N-terminal domain M483_1045 PF13953 PapC C-terminal domain M483_1046 PF00419 Fimbrial protein M483_1047 PF01757 Acyltransferase family M483_1049 PF00665 Integrase core domain M483_1049 PF13333 Integrase core domain M483_1049 PF13276 HTH-like domain M483_105 PF01636 Phosphotransferase enzyme family M483_1050 PF02219 Methylenetetrahydrofolate reductase M483_1051 PF03447 Homoserine dehydrogenase, NAD binding domain M483_1051 PF00696 Amino acid kinase family M483_1051 PF00742 Homoserine dehydrogenase M483_1052 PF01053 Cys/Met metabolism PLP-dependent enzyme M483_1053 PF01340 Met Apo-repressor, MetJ M483_1054 PF05360 yiaA/B two helix domain M483_1055 PF01197 Ribosomal protein L31 M483_1056 PF18074 Primosomal protein N C-terminal domain M483_1056 PF00270 DEAD/DEAH box helicase M483_1056 PF00271 Helicase conserved C-terminal domain M483_1056 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M483_1056 PF17764 3′ DNA-binding domain (3′BD) M483_1058 PF00356 Bacterial regulatory proteins, lacI family M483_1059 PF05036 Sporulation related domain M483_106 PF02348 Cytidylyltransferase M483_1060 PF00227 Proteasome subunit M483_1061 PF00004 ATPase family associated with various cellular activities (AAA) M483_1061 PF10431 C-terminal, D2-small domain, of ClpB protein M483_1061 PF07724 AAA domain (Cdc48 subfamily) M483_1062 PF01040 UbiA prenyltransferase family M483_1063 PF03737 Aldolase/RraA M483_1066 PF00529 HlyD membrane-fusion protein of T1SS M483_1066 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_1067 PF03412 Peptidase C39 family M483_1067 PF00664 ABC transporter transmembrane region M483_1067 PF00005 ABC transporter M483_1068 PF01797 Transposase IS200 like M483_1069 PF06005 Cell division protein ZapB M483_107 PF03966 Trm112p-like protein M483_1070 PF00230 Major intrinsic protein M483_1071 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_1071 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_1072 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M483_1073 PF00175 Oxidoreductase NAD-binding domain M483_1073 PF00970 Oxidoreductase FAD-binding domain M483_1074 PF05656 Protein of unknown function (DUF805) M483_1075 PF07305 Protein of unknown function (DUF1454) M483_1076 PF00121 Triosephosphate isomerase M483_1077 PF03466 LysR substrate binding domain M483_1077 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_1078 PF02585 GlcNAc-PI de-N-acetylase M483_1079 PF03737 Aldolase/RraA M483_108 PF00313 'Cold-shock' DNA-binding domain M483_1080 PF00939 Sodium:sulfate symporter transmembrane region M483_1081 PF00939 Sodium:sulfate symporter transmembrane region M483_1085 PF00365 Phosphofructokinase M483_1086 PF16916 Dimerisation domain of Zinc Transporter M483_1086 PF01545 Cation efflux family M483_1087 PF04754 Putative transposase, YhgA-like M483_1088 PF07813 LTXXQ motif family protein M483_1089 PF00072 Response regulator receiver domain M483_1089 PF00486 Transcriptional regulatory protein, C terminal M483_109 PF07063 Domain of unknown function (DUF1338) M483_1090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1090 PF00512 His Kinase A (phospho-acceptor) domain M483_1090 PF16527 Two-component sensor protein CpxA, periplasmic domain M483_1090 PF00672 HAMP domain M483_1091 PF12833 Helix-turn-helix domain M483_1091 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M483_1091 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M483_1091 PF02805 Metal binding domain of Ada M483_1092 PF00588 SpoU rRNA Methylase family M483_1093 PF00132 Bacterial transferase hexapeptide (six repeats) M483_1093 PF06426 Serine acetyltransferase, N-terminal M483_1094 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M483_1094 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M483_1095 PF02556 Preprotein translocase subunit SecB M483_1096 PF00462 Glutaredoxin M483_1097 PF00581 Rhodanese-like domain M483_1098 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M483_1098 PF01676 Metalloenzyme superfamily M483_1099 PF01551 Peptidase family M23 M483_110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M483_1100 PF04748 Divergent polysaccharide deacetylase M483_1101 PF04748 Divergent polysaccharide deacetylase M483_1102 PF00107 Zinc-binding dehydrogenase M483_1102 PF08240 Alcohol dehydrogenase GroES-like domain M483_1103 PF00155 Aminotransferase class I and II M483_1104 PF01370 NAD dependent epimerase/dehydratase family M483_1105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M483_1106 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M483_1107 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M483_1108 PF00535 Glycosyl transferase family 2 M483_1109 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M483_1109 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M483_1109 PF06827 Zinc finger found in FPG and IleRS M483_111 PF00005 ABC transporter M483_111 PF00664 ABC transporter transmembrane region M483_1110 PF01467 Cytidylyltransferase-like M483_1111 PF00471 Ribosomal protein L33 M483_1112 PF00830 Ribosomal L28 family M483_1113 PF04002 RadC-like JAB domain M483_1114 PF02441 Flavoprotein M483_1114 PF04127 DNA / pantothenate metabolism flavoprotein M483_1115 PF00692 dUTPase M483_1116 PF00440 Bacterial regulatory proteins, tetR family M483_1117 PF00156 Phosphoribosyl transferase domain M483_1118 PF01138 3' exoribonuclease family, domain 1 M483_1118 PF03725 3' exoribonuclease family, domain 2 M483_1119 PF03755 YicC-like family, N-terminal region M483_1119 PF08340 Domain of unknown function (DUF1732) M483_112 PF03772 Competence protein M483_112 PF00753 Metallo-beta-lactamase superfamily M483_1120 PF03458 UPF0126 domain M483_1121 PF01653 NAD-dependent DNA ligase adenylation domain M483_1121 PF03120 NAD-dependent DNA ligase OB-fold domain M483_1122 PF00625 Guanylate kinase M483_1123 PF01192 RNA polymerase Rpb6 M483_1124 PF02824 TGS domain M483_1124 PF13291 ACT domain M483_1124 PF04607 Region found in RelA / SpoT proteins M483_1125 PF00588 SpoU rRNA Methylase family M483_1125 PF12105 SpoU, rRNA methylase, C-terminal M483_1126 PF00271 Helicase conserved C-terminal domain M483_1126 PF00270 DEAD/DEAH box helicase M483_1126 PF17191 RecG wedge domain M483_1127 PF03616 Sodium/glutamate symporter M483_1128 PF00860 Permease family M483_1129 PF05170 AsmA family M483_113 PF00216 Bacterial DNA-binding protein M483_1130 PF00583 Acetyltransferase (GNAT) family M483_1130 PF09500 Putative thioesterase (yiiD_Cterm) M483_1131 PF00665 Integrase core domain M483_1131 PF02796 Helix-turn-helix domain of resolvase M483_1132 PF01695 IstB-like ATP binding protein M483_1133 PF02580 D-Tyr-tRNA(Tyr) deacylase M483_1134 PF03631 Virulence factor BrkB M483_1135 PF13419 Haloacid dehalogenase-like hydrolase M483_1137 PF00120 Glutamine synthetase, catalytic domain M483_1137 PF03951 Glutamine synthetase, beta-Grasp domain M483_1138 PF00989 PAS fold M483_1138 PF00512 His Kinase A (phospho-acceptor) domain M483_1138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1139 PF00072 Response regulator receiver domain M483_1139 PF02954 Bacterial regulatory protein, Fis family M483_1139 PF00158 Sigma-54 interaction domain M483_1140 PF04055 Radical SAM superfamily M483_1140 PF06969 HemN C-terminal domain M483_1141 PF04220 Der GTPase activator (YihI) M483_1142 PF01926 50S ribosome-binding GTPase M483_1143 PF01612 3'-5' exonuclease M483_1143 PF00476 DNA polymerase family A M483_1143 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M483_1143 PF01367 5'-3' exonuclease, C-terminal SAM fold M483_1144 PF01323 DSBA-like thioredoxin domain M483_1145 PF01636 Phosphotransferase enzyme family M483_1146 PF06288 Protein of unknown function (DUF1040) M483_1147 PF12804 MobA-like NTP transferase domain M483_1148 PF03205 Molybdopterin guanine dinucleotide synthesis protein B M483_1149 PF00872 Transposase, Mutator family M483_115 PF00575 S1 RNA binding domain M483_1154 PF00392 Bacterial regulatory proteins, gntR family M483_1154 PF07729 FCD domain M483_1156 PF07690 Major Facilitator Superfamily M483_1157 PF00294 pfkB family carbohydrate kinase M483_1158 PF00294 pfkB family carbohydrate kinase M483_1159 PF05025 RbsD / FucU transport protein family M483_116 PF02224 Cytidylate kinase M483_1160 PF02705 K+ potassium transporter M483_1161 PF07728 AAA domain (dynein-related subfamily) M483_1161 PF17868 AAA lid domain M483_1161 PF12592 Protein of unknown function (DUF3763) M483_1162 PF05762 VWA domain containing CoxE-like protein M483_1163 PF03590 Aspartate-ammonia ligase M483_1164 PF01037 Lrp/AsnC ligand binding domain M483_1165 PF00258 Flavodoxin M483_1166 PF01134 Glucose inhibited division protein A M483_1166 PF13932 GidA associated domain M483_1167 PF02527 rRNA small subunit methyltransferase G M483_1168 PF03899 ATP synthase I chain M483_1169 PF00119 ATP synthase A chain M483_117 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M483_1170 PF00137 ATP synthase subunit C M483_1171 PF00430 ATP synthase B/B' CF(0) M483_1172 PF00213 ATP synthase delta (OSCP) subunit M483_1173 PF00306 ATP synthase alpha/beta chain, C terminal domain M483_1173 PF02874 ATP synthase alpha/beta family, beta-barrel domain M483_1173 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M483_1174 PF00231 ATP synthase M483_1175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M483_1175 PF02874 ATP synthase alpha/beta family, beta-barrel domain M483_1176 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M483_1176 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M483_1177 PF12804 MobA-like NTP transferase domain M483_1177 PF00132 Bacterial transferase hexapeptide (six repeats) M483_1178 PF01380 SIS domain M483_1179 PF12849 PBP superfamily domain M483_118 PF00266 Aminotransferase class-V M483_1180 PF00528 Binding-protein-dependent transport system inner membrane component M483_1181 PF00528 Binding-protein-dependent transport system inner membrane component M483_1182 PF00005 ABC transporter M483_1183 PF01895 PhoU domain M483_1185 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_1186 PF00528 Binding-protein-dependent transport system inner membrane component M483_1187 PF00528 Binding-protein-dependent transport system inner membrane component M483_1188 PF13419 Haloacid dehalogenase-like hydrolase M483_1189 PF00860 Permease family M483_1192 PF07055 Enoyl reductase FAD binding domain M483_1192 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M483_1192 PF12241 Trans-2-enoyl-CoA reductase catalytic region M483_1193 PF01926 50S ribosome-binding GTPase M483_1193 PF12631 MnmE helical domain M483_1193 PF10396 GTP-binding protein TrmE N-terminus M483_1194 PF02096 60Kd inner membrane protein M483_1194 PF14849 YidC periplasmic domain M483_1195 PF01809 Putative membrane protein insertion efficiency factor M483_1196 PF00825 Ribonuclease P M483_1197 PF00468 Ribosomal protein L34 M483_1199 PF00308 Bacterial dnaA protein M483_1199 PF11638 DnaA N-terminal domain M483_1199 PF08299 Bacterial dnaA protein helix-turn-helix M483_12 PF00781 Diacylglycerol kinase catalytic domain M483_120 PF05662 Coiled stalk of trimeric autotransporter adhesin M483_120 PF05658 Head domain of trimeric autotransporter adhesin M483_120 PF13018 Extended Signal Peptide of Type V secretion system M483_120 PF05658 Head domain of trimeric autotransporter adhesin M483_120 PF03895 YadA-like membrane anchor domain M483_120 PF05662 Coiled stalk of trimeric autotransporter adhesin M483_120 PF03895 YadA-like membrane anchor domain M483_120 PF13018 Extended Signal Peptide of Type V secretion system M483_1200 PF00712 DNA polymerase III beta subunit, N-terminal domain M483_1200 PF02767 DNA polymerase III beta subunit, central domain M483_1200 PF02768 DNA polymerase III beta subunit, C-terminal domain M483_1201 PF02463 RecF/RecN/SMC N terminal domain M483_1202 PF00986 DNA gyrase B subunit, carboxyl terminus M483_1202 PF18053 DNA gyrase B subunit insert domain M483_1202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1202 PF01751 Toprim domain M483_1202 PF00204 DNA gyrase B M483_1204 PF00665 Integrase core domain M483_1204 PF13276 HTH-like domain M483_1204 PF13333 Integrase core domain M483_1206 PF02423 Ornithine cyclodeaminase/mu-crystallin family M483_1207 PF13291 ACT domain M483_1207 PF00291 Pyridoxal-phosphate dependent enzyme M483_1208 PF12566 Protein of unknown function (DUF3748) M483_1208 PF07676 WD40-like Beta Propeller Repeat M483_1209 PF12566 Protein of unknown function (DUF3748) M483_1209 PF07676 WD40-like Beta Propeller Repeat M483_121 PF17763 Glutaminase/Asparaginase C-terminal domain M483_121 PF00710 Asparaginase, N-terminal M483_1210 PF07119 Protein of unknown function (DUF1375) M483_1211 PF00011 Hsp20/alpha crystallin family M483_1212 PF00011 Hsp20/alpha crystallin family M483_1213 PF06826 Predicted Permease Membrane Region M483_1213 PF02080 TrkA-C domain M483_1214 PF00155 Aminotransferase class I and II M483_1216 PF00128 Alpha amylase, catalytic domain M483_1217 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M483_1217 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M483_1219 PF13488 Glycine zipper M483_1219 PF00691 OmpA family M483_122 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding M483_122 PF18381 YcaO cyclodehydratase C-terminal domain M483_1221 PF03352 Methyladenine glycosylase M483_1223 PF02091 Glycyl-tRNA synthetase alpha subunit M483_1224 PF05746 DALR anticodon binding domain M483_1224 PF02092 Glycyl-tRNA synthetase beta subunit M483_1225 PF11254 Protein of unknown function (DUF3053) M483_1226 PF02378 Phosphotransferase system, EIIC M483_1226 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M483_1226 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M483_1227 PF01232 Mannitol dehydrogenase Rossmann domain M483_1227 PF08125 Mannitol dehydrogenase C-terminal domain M483_1228 PF05068 Mannitol repressor M483_123 PF01226 Formate/nitrite transporter M483_1230 PF10928 Protein of unknown function (DUF2810) M483_1234 PF00672 HAMP domain M483_1234 PF02203 Tar ligand binding domain homologue M483_1234 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_1235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M483_1235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M483_1236 PF02634 FdhD/NarQ family M483_1237 PF00384 Molybdopterin oxidoreductase M483_1237 PF01568 Molydopterin dinucleotide binding domain M483_1237 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M483_1238 PF01568 Molydopterin dinucleotide binding domain M483_1238 PF00384 Molybdopterin oxidoreductase M483_1238 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M483_1239 PF09163 Formate dehydrogenase N, transmembrane M483_1239 PF13247 4Fe-4S dicluster domain M483_124 PF01228 Glycine radical M483_124 PF02901 Pyruvate formate lyase-like M483_1240 PF01292 Prokaryotic cytochrome b561 M483_1241 PF04216 Protein involved in formate dehydrogenase formation M483_1242 PF03841 L-seryl-tRNA selenium transferase M483_1242 PF12390 Selenocysteine synthase N terminal M483_1243 PF09107 Elongation factor SelB, winged helix M483_1243 PF09106 Elongation factor SelB, winged helix M483_1243 PF03144 Elongation factor Tu domain 2 M483_1243 PF00009 Elongation factor Tu GTP binding domain M483_1244 PF13700 Domain of unknown function (DUF4158) M483_1244 PF01526 Tn3 transposase DDE domain M483_1245 PF00872 Transposase, Mutator family M483_1249 PF07690 Major Facilitator Superfamily M483_1250 PF13333 Integrase core domain M483_1250 PF00665 Integrase core domain M483_1250 PF13276 HTH-like domain M483_1252 PF08220 DeoR-like helix-turn-helix domain M483_1252 PF00455 DeoR C terminal sensor domain M483_1253 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease M483_1253 PF01694 Rhomboid family M483_1254 PF00581 Rhodanese-like domain M483_1255 PF17874 MalT-like TPR region M483_1255 PF00196 Bacterial regulatory proteins, luxR family M483_1256 PF00343 Carbohydrate phosphorylase M483_1257 PF02446 4-alpha-glucanotransferase M483_1258 PF01106 NifU-like domain M483_1258 PF01521 Iron-sulphur cluster biosynthesis M483_1259 PF00156 Phosphoribosyl transferase domain M483_126 PF04055 Radical SAM superfamily M483_1260 PF00561 alpha/beta hydrolase fold M483_1261 PF07338 Protein of unknown function (DUF1471) M483_1262 PF09012 FeoC like transcriptional regulator M483_1263 PF07664 Ferrous iron transport protein B C terminus M483_1263 PF17910 FeoB cytosolic helical domain M483_1263 PF02421 Ferrous iron transport protein B M483_1263 PF07670 Nucleoside recognition M483_1264 PF04023 FeoA domain M483_1265 PF17674 HHH domain M483_1265 PF00575 S1 RNA binding domain M483_1265 PF09371 Tex-like protein N-terminal domain M483_1265 PF16921 Tex protein YqgF-like domain M483_1266 PF01272 Transcription elongation factor, GreA/GreB, C-term M483_1266 PF03449 Transcription elongation factor, N-terminal M483_1267 PF00072 Response regulator receiver domain M483_1267 PF00486 Transcriptional regulatory protein, C terminal M483_1268 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1268 PF00512 His Kinase A (phospho-acceptor) domain M483_1268 PF00672 HAMP domain M483_1269 PF01293 Phosphoenolpyruvate carboxykinase M483_127 PF07690 Major Facilitator Superfamily M483_1270 PF01430 Hsp33 protein M483_1271 PF01479 S4 domain M483_1272 PF13419 Haloacid dehalogenase-like hydrolase M483_1273 PF07095 Intracellular growth attenuator protein IgaA M483_1275 PF00293 NUDIX domain M483_1276 PF00905 Penicillin binding protein transpeptidase domain M483_1276 PF17092 Penicillin-binding protein OB-like domain M483_1276 PF00912 Transglycosylase M483_128 PF02403 Seryl-tRNA synthetase N-terminal domain M483_128 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M483_1281 PF03958 Bacterial type II/III secretion system short domain M483_1281 PF00263 Bacterial type II and III secretion system protein M483_1282 PF01202 Shikimate kinase M483_1283 PF01761 3-dehydroquinate synthase M483_1284 PF05036 Sporulation related domain M483_1285 PF02086 D12 class N6 adenine-specific DNA methyltransferase M483_1286 PF00834 Ribulose-phosphate 3 epimerase family M483_1287 PF13419 Haloacid dehalogenase-like hydrolase M483_1288 PF00579 tRNA synthetases class I (W and Y) M483_1289 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M483_1289 PF14824 Sirohaem biosynthesis protein central M483_1289 PF10414 Sirohaem synthase dimerisation region M483_129 PF12002 MgsA AAA+ ATPase C terminal M483_129 PF16193 AAA C-terminal domain M483_129 PF00004 ATPase family associated with various cellular activities (AAA) M483_1290 PF01226 Formate/nitrite transporter M483_1291 PF13806 Rieske-like [2Fe-2S] domain M483_1292 PF18267 Rubredoxin NAD+ reductase C-terminal domain M483_1292 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_1292 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M483_1292 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M483_1292 PF04324 BFD-like [2Fe-2S] binding domain M483_1293 PF07969 Amidohydrolase family M483_1294 PF07690 Major Facilitator Superfamily M483_1296 PF00356 Bacterial regulatory proteins, lacI family M483_1297 PF11975 Family 4 glycosyl hydrolase C-terminal domain M483_1297 PF02056 Family 4 glycosyl hydrolase M483_1298 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M483_1299 PF05872 Bacterial protein of unknown function (DUF853) M483_1300 PF00117 Glutamine amidotransferase class-I M483_1301 PF00202 Aminotransferase class-III M483_1302 PF12805 FUSC-like inner membrane protein yccS M483_1303 PF13545 Crp-like helix-turn-helix domain M483_1303 PF00027 Cyclic nucleotide-binding domain M483_1304 PF02566 OsmC-like protein M483_1306 PF00485 Phosphoribulokinase / Uridine kinase family M483_1307 PF06794 Uncharacterised protein family (UPF0270) M483_1308 PF00561 alpha/beta hydrolase fold M483_1309 PF01810 LysE type translocator M483_131 PF03548 Outer membrane lipoprotein carrier protein LolA M483_1310 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M483_1311 PF00005 ABC transporter M483_1312 PF00528 Binding-protein-dependent transport system inner membrane component M483_1313 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M483_1316 PF00535 Glycosyl transferase family 2 M483_1317 PF00005 ABC transporter M483_1317 PF12848 ABC transporter M483_1318 PF02525 Flavodoxin-like fold M483_1319 PF02254 TrkA-N domain M483_1319 PF00999 Sodium/hydrogen exchanger family M483_132 PF09397 Ftsk gamma domain M483_132 PF17854 FtsK alpha domain M483_132 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M483_132 PF01580 FtsK/SpoIIIE family M483_1320 PF09526 Probable metal-binding protein (DUF2387) M483_1321 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M483_1322 PF04102 SlyX M483_1323 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M483_1323 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M483_1324 PF08348 YheO-like PAS domain M483_1324 PF13309 HTH domain M483_1325 PF02635 DsrE/DsrF-like family M483_1326 PF02635 DsrE/DsrF-like family M483_1327 PF04077 DsrH like protein M483_1328 PF00164 Ribosomal protein S12/S23 M483_1329 PF00177 Ribosomal protein S7p/S5e M483_133 PF01037 Lrp/AsnC ligand binding domain M483_1330 PF00009 Elongation factor Tu GTP binding domain M483_1330 PF14492 Elongation Factor G, domain II M483_1330 PF00679 Elongation factor G C-terminus M483_1330 PF03144 Elongation factor Tu domain 2 M483_1330 PF03764 Elongation factor G, domain IV M483_1331 PF03143 Elongation factor Tu C-terminal domain M483_1331 PF03144 Elongation factor Tu domain 2 M483_1331 PF00009 Elongation factor Tu GTP binding domain M483_1332 PF01797 Transposase IS200 like M483_1334 PF04324 BFD-like [2Fe-2S] binding domain M483_1335 PF00210 Ferritin-like domain M483_1336 PF00338 Ribosomal protein S10p/S20e M483_1337 PF00297 Ribosomal protein L3 M483_1338 PF00573 Ribosomal protein L4/L1 family M483_1339 PF00276 Ribosomal protein L23 M483_134 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_1340 PF03947 Ribosomal Proteins L2, C-terminal domain M483_1340 PF00181 Ribosomal Proteins L2, RNA binding domain M483_1341 PF00203 Ribosomal protein S19 M483_1342 PF00237 Ribosomal protein L22p/L17e M483_1343 PF00189 Ribosomal protein S3, C-terminal domain M483_1343 PF07650 KH domain M483_1344 PF00252 Ribosomal protein L16p/L10e M483_1345 PF00831 Ribosomal L29 protein M483_1346 PF00366 Ribosomal protein S17 M483_1347 PF00238 Ribosomal protein L14p/L23e M483_1348 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M483_1348 PF00467 KOW motif M483_1349 PF00673 ribosomal L5P family C-terminus M483_1349 PF00281 Ribosomal protein L5 M483_135 PF00664 ABC transporter transmembrane region M483_135 PF00005 ABC transporter M483_1350 PF00253 Ribosomal protein S14p/S29e M483_1351 PF00410 Ribosomal protein S8 M483_1352 PF00347 Ribosomal protein L6 M483_1353 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M483_1354 PF03719 Ribosomal protein S5, C-terminal domain M483_1354 PF00333 Ribosomal protein S5, N-terminal domain M483_1355 PF00327 Ribosomal protein L30p/L7e M483_1356 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M483_1357 PF00344 SecY translocase M483_1358 PF00444 Ribosomal protein L36 M483_1359 PF00416 Ribosomal protein S13/S18 M483_136 PF00664 ABC transporter transmembrane region M483_136 PF00005 ABC transporter M483_1360 PF00411 Ribosomal protein S11 M483_1361 PF00163 Ribosomal protein S4/S9 N-terminal domain M483_1361 PF01479 S4 domain M483_1362 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M483_1362 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M483_1362 PF01000 RNA polymerase Rpb3/RpoA insert domain M483_1363 PF01196 Ribosomal protein L17 M483_1364 PF13411 MerR HTH family regulatory protein M483_1365 PF03889 Alternative ribosome-rescue factor A M483_1366 PF01741 Large-conductance mechanosensitive channel, MscL M483_1367 PF02254 TrkA-N domain M483_1367 PF02080 TrkA-C domain M483_1368 PF01189 16S rRNA methyltransferase RsmB/F M483_1368 PF01029 NusB family M483_1369 PF02911 Formyl transferase, C-terminal domain M483_1369 PF00551 Formyl transferase M483_137 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M483_1370 PF01327 Polypeptide deformylase M483_1371 PF02481 DNA recombination-mediator protein A M483_1371 PF17782 DprA winged helix domain M483_1372 PF04361 Protein of unknown function (DUF494) M483_1373 PF01396 Topoisomerase DNA binding C4 zinc finger M483_1374 PF01300 Telomere recombination M483_1375 PF08501 Shikimate dehydrogenase substrate binding domain M483_1375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M483_1375 PF01488 Shikimate / quinate 5-dehydrogenase M483_1376 PF00132 Bacterial transferase hexapeptide (six repeats) M483_138 PF01176 Translation initiation factor 1A / IF-1 M483_1382 PF01527 Transposase M483_1383 PF13276 HTH-like domain M483_1383 PF13683 Integrase core domain M483_1384 PF01367 5'-3' exonuclease, C-terminal SAM fold M483_1384 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M483_1385 PF01695 IstB-like ATP binding protein M483_1386 PF00665 Integrase core domain M483_1386 PF02796 Helix-turn-helix domain of resolvase M483_1388 PF00474 Sodium:solute symporter family M483_1389 PF04341 Protein of unknown function, DUF485 M483_139 PF01797 Transposase IS200 like M483_1390 PF13193 AMP-binding enzyme C-terminal domain M483_1390 PF00501 AMP-binding enzyme M483_1390 PF16177 Acetyl-coenzyme A synthetase N-terminus M483_1391 PF00375 Sodium:dicarboxylate symporter family M483_1392 PF00072 Response regulator receiver domain M483_1392 PF00196 Bacterial regulatory proteins, luxR family M483_1393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1393 PF00672 HAMP domain M483_1393 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M483_1393 PF00072 Response regulator receiver domain M483_1393 PF01627 Hpt domain M483_1393 PF00512 His Kinase A (phospho-acceptor) domain M483_1397 PF12833 Helix-turn-helix domain M483_1397 PF14525 AraC-binding-like domain M483_140 PF17871 AAA lid domain M483_140 PF02861 Clp amino terminal domain, pathogenicity island component M483_140 PF10431 C-terminal, D2-small domain, of ClpB protein M483_140 PF07724 AAA domain (Cdc48 subfamily) M483_140 PF00004 ATPase family associated with various cellular activities (AAA) M483_1401 PF01514 Secretory protein of YscJ/FliF family M483_1404 PF00771 FHIPEP family M483_1405 PF18269 T3SS EscN ATPase C-terminal domain M483_1405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M483_1408 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M483_1409 PF00813 FliP family M483_141 PF02617 ATP-dependent Clp protease adaptor protein ClpS M483_1410 PF01313 Bacterial export proteins, family 3 M483_1411 PF01311 Bacterial export proteins, family 1 M483_1412 PF01312 FlhB HrpN YscU SpaS Family M483_1413 PF04143 Sulphur transport M483_1414 PF01206 Sulfurtransferase TusA M483_1415 PF03466 LysR substrate binding domain M483_1415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_1416 PF03222 Tryptophan/tyrosine permease family M483_1417 PF01053 Cys/Met metabolism PLP-dependent enzyme M483_1418 PF00005 ABC transporter M483_1419 PF01032 FecCD transport family M483_142 PF00313 'Cold-shock' DNA-binding domain M483_1420 PF01497 Periplasmic binding protein M483_1421 PF05171 Haemin-degrading HemS.ChuX domain M483_1422 PF00593 TonB dependent receptor M483_1422 PF07715 TonB-dependent Receptor Plug Domain M483_1423 PF10636 Hemin uptake protein hemP M483_1424 PF13460 NAD(P)H-binding M483_1425 PF06228 Haem utilisation ChuX/HutX M483_1426 PF04055 Radical SAM superfamily M483_143 PF12704 MacB-like periplasmic core domain M483_143 PF02687 FtsX-like permease family M483_143 PF00005 ABC transporter M483_1430 PF15608 PELOTA RNA binding domain M483_1430 PF11202 Phosphoribosyl transferase (PRTase) M483_1434 PF02342 TerD domain M483_1435 PF02342 TerD domain M483_1436 PF05099 Tellurite resistance protein TerB M483_1437 PF03741 Integral membrane protein TerC family M483_1438 PF02342 TerD domain M483_1439 PF02342 TerD domain M483_144 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_1441 PF13953 PapC C-terminal domain M483_1441 PF13954 PapC N-terminal domain M483_1441 PF00577 Outer membrane usher protein M483_1442 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_1445 PF08031 Berberine and berberine like M483_1445 PF01565 FAD binding domain M483_1446 PF12951 Passenger-associated-transport-repeat M483_1448 PF04345 Chorismate lyase M483_1449 PF01040 UbiA prenyltransferase family M483_145 PF04393 Protein of unknown function (DUF535) M483_1450 PF01553 Acyltransferase M483_1451 PF01219 Prokaryotic diacylglycerol kinase M483_1452 PF01726 LexA DNA binding domain M483_1452 PF00717 Peptidase S24-like M483_1453 PF01475 Ferric uptake regulator family M483_1454 PF01207 Dihydrouridine synthase (Dus) M483_1455 PF09583 Phage shock protein G (Phageshock_PspG) M483_1456 PF08240 Alcohol dehydrogenase GroES-like domain M483_1456 PF00107 Zinc-binding dehydrogenase M483_1457 PF00772 DnaB-like helicase N terminal domain M483_1457 PF03796 DnaB-like helicase C terminal domain M483_1458 PF01168 Alanine racemase, N-terminal domain M483_1458 PF00842 Alanine racemase, C-terminal domain M483_1459 PF00155 Aminotransferase class I and II M483_146 PF11398 Protein of unknown function (DUF2813) M483_1460 PF04237 YjbR M483_1461 PF00005 ABC transporter M483_1461 PF17755 UvrA DNA-binding domain M483_1461 PF17760 UvrA interaction domain M483_1462 PF00436 Single-strand binding protein family M483_1463 PF05336 L-rhamnose mutarotase M483_1464 PF00465 Iron-containing alcohol dehydrogenase M483_1465 PF00596 Class II Aldolase and Adducin N-terminal domain M483_1466 PF06134 L-rhamnose isomerase (RhaA) M483_1467 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_1467 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_147 PF03956 Lysine exporter LysO M483_1470 PF02311 AraC-like ligand binding domain M483_1470 PF12833 Helix-turn-helix domain M483_1471 PF12833 Helix-turn-helix domain M483_1471 PF02311 AraC-like ligand binding domain M483_1472 PF06379 L-rhamnose-proton symport protein (RhaT) M483_1479 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M483_1479 PF13247 4Fe-4S dicluster domain M483_1479 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_148 PF03063 Prismane/CO dehydrogenase family M483_1480 PF13247 4Fe-4S dicluster domain M483_1480 PF12800 4Fe-4S binding domain M483_1481 PF00384 Molybdopterin oxidoreductase M483_1481 PF01568 Molydopterin dinucleotide binding domain M483_1481 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M483_1482 PF11412 Disulphide bond corrector protein DsbC M483_1482 PF02683 Cytochrome C biogenesis protein transmembrane region M483_1483 PF03091 CutA1 divalent ion tolerance protein M483_1484 PF03605 Anaerobic c4-dicarboxylate membrane transporter M483_1485 PF00206 Lyase M483_1485 PF10415 Fumarase C C-terminus M483_1486 PF04186 FxsA cytoplasmic membrane protein M483_1487 PF00166 Chaperonin 10 Kd subunit M483_1488 PF00118 TCP-1/cpn60 chaperonin family M483_1489 PF13698 Domain of unknown function (DUF4156) M483_149 PF00970 Oxidoreductase FAD-binding domain M483_149 PF00111 2Fe-2S iron-sulfur cluster binding domain M483_149 PF00175 Oxidoreductase NAD-binding domain M483_1490 PF04055 Radical SAM superfamily M483_1491 PF08207 Elongation factor P (EF-P) KOW-like domain M483_1491 PF09285 Elongation factor P, C-terminal M483_1491 PF01132 Elongation factor P (EF-P) OB domain M483_1492 PF00893 Small Multidrug Resistance protein M483_1493 PF02313 Fumarate reductase subunit D M483_1494 PF02300 Fumarate reductase subunit C M483_1495 PF13085 2Fe-2S iron-sulfur cluster binding domain M483_1495 PF13183 4Fe-4S dicluster domain M483_1496 PF02910 Fumarate reductase flavoprotein C-term M483_1496 PF00890 FAD binding domain M483_1497 PF00152 tRNA synthetases class II (D, K and N) M483_1498 PF00924 Mechanosensitive ion channel M483_1498 PF12795 Mechanosensitive ion channel porin domain M483_1498 PF12794 Mechanosensitive ion channel inner membrane domain 1 M483_1499 PF02666 Phosphatidylserine decarboxylase M483_15 PF08543 Phosphomethylpyrimidine kinase M483_150 PF00205 Thiamine pyrophosphate enzyme, central domain M483_150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M483_150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M483_1500 PF03193 RsgA GTPase M483_1501 PF00929 Exonuclease M483_1504 PF08331 Domain of unknown function (DUF1730) M483_1505 PF03853 YjeF-related protein N-terminus M483_1505 PF01256 Carbohydrate kinase M483_1506 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M483_1507 PF01520 N-acetylmuramoyl-L-alanine amidase M483_1508 PF01119 DNA mismatch repair protein, C-terminal domain M483_1508 PF08676 MutL C terminal dimerisation domain M483_151 PF01212 Beta-eliminating lyase M483_1510 PF17209 Hfq protein M483_1511 PF13167 GTP-binding GTPase N-terminal M483_1511 PF01926 50S ribosome-binding GTPase M483_1511 PF16360 GTP-binding GTPase Middle Region M483_1512 PF01145 SPFH domain / Band 7 family M483_1512 PF12221 Bacterial membrane protein N terminal M483_1513 PF01145 SPFH domain / Band 7 family M483_1514 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) M483_1515 PF00709 Adenylosuccinate synthetase M483_1516 PF02082 Transcriptional regulator M483_1517 PF17876 Cold shock domain M483_1517 PF08461 Ribonuclease R winged-helix domain M483_1517 PF00575 S1 RNA binding domain M483_1517 PF00773 RNB domain M483_1517 PF08206 Ribonuclease B OB domain M483_1518 PF08032 RNA 2'-O ribose methyltransferase substrate binding M483_1518 PF00588 SpoU rRNA Methylase family M483_1519 PF02770 Acyl-CoA dehydrogenase, middle domain M483_1519 PF18158 Adaptive response protein AidB N-terminal domain M483_1519 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M483_152 PF13460 NAD(P)H-binding M483_152 PF11066 Protein of unknown function (DUF2867) M483_1520 PF07338 Protein of unknown function (DUF1471) M483_1521 PF02796 Helix-turn-helix domain of resolvase M483_1521 PF00665 Integrase core domain M483_1522 PF01695 IstB-like ATP binding protein M483_1523 PF00884 Sulfatase M483_1523 PF08019 Phosphoethanolamine transferase EptA/EptB M483_1524 PF00072 Response regulator receiver domain M483_1524 PF00196 Bacterial regulatory proteins, luxR family M483_1525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1525 PF07730 Histidine kinase M483_1525 PF05231 MASE1 M483_1526 PF07690 Major Facilitator Superfamily M483_1529 PF13332 Hemagglutinin repeat M483_1529 PF04829 Pre-toxin domain with VENN motif M483_1529 PF05594 Haemagluttinin repeat M483_1529 PF05860 haemagglutination activity domain M483_153 PF01370 NAD dependent epimerase/dehydratase family M483_1530 PF17287 POTRA domain M483_1530 PF08479 POTRA domain, ShlB-type M483_1530 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M483_1532 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_1533 PF00528 Binding-protein-dependent transport system inner membrane component M483_1534 PF00528 Binding-protein-dependent transport system inner membrane component M483_1534 PF12911 N-terminal TM domain of oligopeptide transport permease C M483_1535 PF00005 ABC transporter M483_1535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_1536 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_1536 PF00005 ABC transporter M483_1537 PF01270 Glycosyl hydrolases family 8 M483_1538 PF00563 EAL domain M483_1538 PF17154 Gammaproteobacterial periplasmic sensor domain M483_1538 PF00990 Diguanylate cyclase, GGDEF domain M483_1538 PF00672 HAMP domain M483_1539 PF06178 Oligogalacturonate-specific porin protein (KdgM) M483_154 PF12883 Protein of unknown function (DUF3828) M483_1540 PF06917 Periplasmic pectate lyase M483_1542 PF00375 Sodium:dicarboxylate symporter family M483_1543 PF05193 Peptidase M16 inactive domain M483_1543 PF00675 Insulinase (Peptidase family M16) M483_1544 PF00294 pfkB family carbohydrate kinase M483_1545 PF01361 Tautomerase enzyme M483_1546 PF00563 EAL domain M483_1547 PF05170 AsmA family M483_1548 PF02611 CDP-diacylglycerol pyrophosphatase M483_1549 PF03631 Virulence factor BrkB M483_155 PF01817 Chorismate mutase type II M483_1554 PF02595 Glycerate kinase family M483_1555 PF02447 GntP family permease M483_1556 PF13556 PucR C-terminal helix-turn-helix domain M483_1556 PF05651 Putative sugar diacid recognition M483_1556 PF17853 GGDEF-like domain M483_1557 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_1557 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M483_1558 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M483_1559 PF01432 Peptidase family M3 M483_156 PF00005 ABC transporter M483_1560 PF04445 Putative SAM-dependent methyltransferase M483_1561 PF08548 Peptidase M10 serralysin C terminal M483_1561 PF00413 Matrixin M483_1561 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) M483_1562 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M483_1562 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M483_1563 PF00582 Universal stress protein family M483_1564 PF10625 Universal stress protein B (UspB) M483_1565 PF01797 Transposase IS200 like M483_1566 PF01384 Phosphate transporter family M483_1568 PF00072 Response regulator receiver domain M483_1568 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1568 PF00512 His Kinase A (phospho-acceptor) domain M483_1568 PF08448 PAS fold M483_1568 PF13188 PAS domain M483_1569 PF00005 ABC transporter M483_157 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_1570 PF02653 Branched-chain amino acid transport system / permease component M483_1571 PF13407 Periplasmic binding protein domain M483_1573 PF01116 Fructose-bisphosphate aldolase class-II M483_1575 PF00072 Response regulator receiver domain M483_1575 PF00486 Transcriptional regulatory protein, C terminal M483_1577 PF17954 Quercetinase C-terminal cupin domain M483_1577 PF02678 Pirin M483_1578 PF00356 Bacterial regulatory proteins, lacI family M483_1578 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M483_1579 PF00356 Bacterial regulatory proteins, lacI family M483_1579 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M483_158 PF00528 Binding-protein-dependent transport system inner membrane component M483_1580 PF02447 GntP family permease M483_1581 PF01202 Shikimate kinase M483_1585 PF01914 MarC family integral membrane protein M483_1586 PF01118 Semialdehyde dehydrogenase, NAD binding domain M483_1586 PF02774 Semialdehyde dehydrogenase, dimerisation domain M483_159 PF00528 Binding-protein-dependent transport system inner membrane component M483_1591 PF09134 Invasin, domain 3 M483_1591 PF07979 Intimin C-type lectin domain M483_1591 PF02369 Bacterial Ig-like domain (group 1) M483_1591 PF11924 Inverse autotransporter, beta-domain M483_1593 PF09134 Invasin, domain 3 M483_1593 PF11924 Inverse autotransporter, beta-domain M483_1593 PF02369 Bacterial Ig-like domain (group 1) M483_1594 PF06580 Histidine kinase M483_1594 PF07694 5TMR of 5TMR-LYT M483_1595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M483_1595 PF02806 Alpha amylase, C-terminal all-beta domain M483_1595 PF00128 Alpha amylase, catalytic domain M483_1596 PF00128 Alpha amylase, catalytic domain M483_1596 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M483_1596 PF18390 Glycogen debranching enzyme C-terminal domain M483_1597 PF00483 Nucleotidyl transferase M483_1598 PF08323 Starch synthase catalytic domain M483_1598 PF00534 Glycosyl transferases group 1 M483_1599 PF00343 Carbohydrate phosphorylase M483_160 PF00892 EamA-like transporter family M483_1600 PF01266 FAD dependent oxidoreductase M483_1600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M483_1603 PF00665 Integrase core domain M483_1603 PF13276 HTH-like domain M483_1603 PF13333 Integrase core domain M483_1605 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M483_1605 PF01138 3' exoribonuclease family, domain 1 M483_1605 PF03725 3' exoribonuclease family, domain 2 M483_1605 PF00575 S1 RNA binding domain M483_1605 PF00013 KH domain M483_1606 PF13181 Tetratricopeptide repeat M483_1606 PF07719 Tetratricopeptide repeat M483_1607 PF00270 DEAD/DEAH box helicase M483_1607 PF03880 DbpA RNA binding domain M483_1607 PF12343 Cold shock protein DEAD box A M483_1607 PF00271 Helicase conserved C-terminal domain M483_1609 PF01381 Helix-turn-helix M483_161 PF10100 Staphylopine dehydrogenase M483_1610 PF00296 Luciferase-like monooxygenase M483_1612 PF00529 HlyD membrane-fusion protein of T1SS M483_1612 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_1613 PF00873 AcrB/AcrD/AcrF family M483_1614 PF02321 Outer membrane efflux protein M483_1614 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M483_1618 PF13508 Acetyltransferase (GNAT) domain M483_1619 PF01541 GIY-YIG catalytic domain M483_162 PF03059 Nicotianamine synthase protein M483_1622 PF13416 Bacterial extracellular solute-binding protein M483_1624 PF00528 Binding-protein-dependent transport system inner membrane component M483_1625 PF17912 MalK OB fold domain M483_1625 PF03459 TOBE domain M483_1625 PF00005 ABC transporter M483_1628 PF13460 NAD(P)H-binding M483_1629 PF12706 Beta-lactamase superfamily domain M483_163 PF00005 ABC transporter M483_1631 PF07969 Amidohydrolase family M483_1632 PF00005 ABC transporter M483_1633 PF00005 ABC transporter M483_1634 PF06007 Phosphonate metabolism protein PhnJ M483_1635 PF05861 Bacterial phosphonate metabolism protein (PhnI) M483_1636 PF05845 Bacterial phosphonate metabolism protein (PhnH) M483_1637 PF06754 Phosphonate metabolism protein PhnG M483_1638 PF00392 Bacterial regulatory proteins, gntR family M483_1638 PF07702 UTRA domain M483_164 PF01032 FecCD transport family M483_1641 PF03477 ATP cone domain M483_1641 PF13597 Anaerobic ribonucleoside-triphosphate reductase M483_1642 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_1642 PF00005 ABC transporter M483_1643 PF00005 ABC transporter M483_1643 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_1644 PF12911 N-terminal TM domain of oligopeptide transport permease C M483_1644 PF00528 Binding-protein-dependent transport system inner membrane component M483_1645 PF00528 Binding-protein-dependent transport system inner membrane component M483_1648 PF04074 YhcH/YjgK/YiaL M483_1649 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M483_1649 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M483_1650 PF06877 Regulator of ribonuclease activity B M483_1651 PF00583 Acetyltransferase (GNAT) family M483_1652 PF08264 Anticodon-binding domain of tRNA M483_1652 PF00133 tRNA synthetases class I (I, L, M and V) M483_1652 PF10458 Valyl tRNA synthetase tRNA binding arm M483_1653 PF04364 DNA polymerase III chi subunit, HolC M483_1654 PF02789 Cytosol aminopeptidase family, N-terminal domain M483_1654 PF00883 Cytosol aminopeptidase family, catalytic domain M483_1655 PF03739 Lipopolysaccharide export system permease LptF/LptG M483_1656 PF03739 Lipopolysaccharide export system permease LptF/LptG M483_1658 PF13356 Arm DNA-binding domain M483_1658 PF00589 Phage integrase family M483_1660 PF08676 MutL C terminal dimerisation domain M483_1660 PF01119 DNA mismatch repair protein, C-terminal domain M483_1661 PF01695 IstB-like ATP binding protein M483_1663 PF02796 Helix-turn-helix domain of resolvase M483_1663 PF00665 Integrase core domain M483_1664 PF12102 Domain of unknown function (DUF3578) M483_1664 PF07728 AAA domain (dynein-related subfamily) M483_1666 PF01527 Transposase M483_1667 PF01555 DNA methylase M483_1672 PF00665 Integrase core domain M483_1673 PF00665 Integrase core domain M483_1676 PF05987 Bacterial protein of unknown function (DUF898) M483_1678 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M483_1679 PF12833 Helix-turn-helix domain M483_1680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M483_1682 PF05524 PEP-utilising enzyme, N-terminal M483_1682 PF02896 PEP-utilising enzyme, TIM barrel domain M483_1682 PF00391 PEP-utilising enzyme, mobile domain M483_1682 PF00381 PTS HPr component phosphorylation site M483_1682 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M483_1683 PF10696 Protein of unknown function (DUF2501) M483_1684 PF03992 Antibiotic biosynthesis monooxygenase M483_1685 PF01791 DeoC/LacD family aldolase M483_1686 PF13407 Periplasmic binding protein domain M483_1687 PF02653 Branched-chain amino acid transport system / permease component M483_1688 PF02653 Branched-chain amino acid transport system / permease component M483_1689 PF00005 ABC transporter M483_169 PF05958 tRNA (Uracil-5-)-methyltransferase M483_1690 PF04198 Putative sugar-binding domain M483_1690 PF00325 Bacterial regulatory proteins, crp family M483_1691 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_1691 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_1692 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M483_1695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_1696 PF00873 AcrB/AcrD/AcrF family M483_1698 PF01095 Pectinesterase M483_1699 PF00990 Diguanylate cyclase, GGDEF domain M483_170 PF10767 Protein of unknown function (DUF2593) M483_1700 PF07256 Protein of unknown function (DUF1435) M483_1702 PF05175 Methyltransferase small domain M483_1702 PF08468 Methyltransferase small domain N-terminal M483_1703 PF03603 DNA polymerase III psi subunit M483_1704 PF00583 Acetyltransferase (GNAT) family M483_1705 PF00009 Elongation factor Tu GTP binding domain M483_1705 PF16658 Class II release factor RF3, C-terminal domain M483_1705 PF03144 Elongation factor Tu domain 2 M483_1706 PF04972 BON domain M483_1707 PF07043 Protein of unknown function (DUF1328) M483_1708 PF01734 Patatin-like phospholipase M483_1709 PF01026 TatD related DNase M483_171 PF00528 Binding-protein-dependent transport system inner membrane component M483_1710 PF07670 Nucleoside recognition M483_1710 PF07662 Na+ dependent nucleoside transporter C-terminus M483_1710 PF01773 Na+ dependent nucleoside transporter N-terminus M483_1711 PF01791 DeoC/LacD family aldolase M483_1712 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M483_1712 PF00591 Glycosyl transferase family, a/b domain M483_1712 PF02885 Glycosyl transferase family, helical bundle domain M483_1713 PF01676 Metalloenzyme superfamily M483_1714 PF01048 Phosphorylase superfamily M483_1715 PF10144 Bacterial virulence factor haemolysin M483_1716 PF18429 Domain of unknown function (DUF5609) M483_1717 PF18073 Rubredoxin metal binding domain M483_1718 PF01381 Helix-turn-helix M483_1718 PF13521 AAA domain M483_172 PF00528 Binding-protein-dependent transport system inner membrane component M483_1721 PF12848 ABC transporter M483_1721 PF00005 ABC transporter M483_1722 PF00691 OmpA family M483_1723 PF17152 Periplasmic sensor domain M483_1723 PF00990 Diguanylate cyclase, GGDEF domain M483_1725 PF00690 Cation transporter/ATPase, N-terminus M483_1725 PF00689 Cation transporting ATPase, C-terminus M483_1726 PF01464 Transglycosylase SLT domain M483_1726 PF14718 Soluble lytic murein transglycosylase L domain M483_1727 PF01931 Protein of unknown function DUF84 M483_1728 PF01371 Trp repressor protein M483_1729 PF12833 Helix-turn-helix domain M483_1729 PF06445 GyrI-like small molecule binding domain M483_173 PF00005 ABC transporter M483_173 PF08402 TOBE domain M483_1730 PF00300 Histidine phosphatase superfamily (branch 1) M483_1732 PF05981 CreA protein M483_1733 PF00072 Response regulator receiver domain M483_1733 PF00486 Transcriptional regulatory protein, C terminal M483_1735 PF03447 Homoserine dehydrogenase, NAD binding domain M483_1735 PF00742 Homoserine dehydrogenase M483_1735 PF13840 ACT domain M483_1735 PF01842 ACT domain M483_1735 PF00696 Amino acid kinase family M483_1736 PF00288 GHMP kinases N terminal domain M483_1736 PF08544 GHMP kinases C terminal M483_1737 PF14821 Threonine synthase N terminus M483_1737 PF00291 Pyridoxal-phosphate dependent enzyme M483_1739 PF03883 Peroxide stress protein YaaA M483_174 PF13416 Bacterial extracellular solute-binding protein M483_1740 PF00923 Transaldolase/Fructose-6-phosphate aldolase M483_1741 PF00994 Probable molybdopterin binding domain M483_1742 PF07690 Major Facilitator Superfamily M483_1744 PF01184 GPR1/FUN34/yaaH family M483_1745 PF00012 Hsp70 protein M483_1746 PF00684 DnaJ central domain M483_1746 PF01556 DnaJ C terminal domain M483_1746 PF00226 DnaJ domain M483_1747 PF06965 Na+/H+ antiporter 1 M483_1748 PF03466 LysR substrate binding domain M483_1748 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_1749 PF01649 Ribosomal protein S20 M483_175 PF10722 Putative bacterial sensory transduction regulator M483_1750 PF06574 FAD synthetase M483_1750 PF01687 Riboflavin kinase M483_1751 PF08264 Anticodon-binding domain of tRNA M483_1751 PF00133 tRNA synthetases class I (I, L, M and V) M483_1751 PF06827 Zinc finger found in FPG and IleRS M483_1752 PF01252 Signal peptidase (SPase) II M483_1753 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M483_1754 PF02401 LytB protein M483_1755 PF01113 Dihydrodipicolinate reductase, N-terminus M483_1755 PF05173 Dihydrodipicolinate reductase, C-terminus M483_1756 PF00117 Glutamine amidotransferase class-I M483_1756 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M483_1757 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M483_1757 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M483_1757 PF02142 MGS-like domain M483_1758 PF01810 LysE type translocator M483_1759 PF06738 Putative threonine/serine exporter M483_176 PF07214 Protein of unknown function (DUF1418) M483_1760 PF12821 Threonine/Serine exporter, ThrE M483_1761 PF00186 Dihydrofolate reductase M483_1763 PF00149 Calcineurin-like phosphoesterase M483_1764 PF04379 ApaG domain M483_1765 PF00398 Ribosomal RNA adenine dimethylase M483_1766 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M483_1767 PF09312 SurA N-terminal domain M483_1767 PF00639 PPIC-type PPIASE domain M483_1768 PF03968 OstA-like protein M483_1768 PF04453 LPS transport system D M483_1769 PF00226 DnaJ domain M483_1769 PF05099 Tellurite resistance protein TerB M483_177 PF00462 Glutaredoxin M483_1770 PF00849 RNA pseudouridylate synthase M483_1779 PF07724 AAA domain (Cdc48 subfamily) M483_1779 PF10431 C-terminal, D2-small domain, of ClpB protein M483_1779 PF00004 ATPase family associated with various cellular activities (AAA) M483_1779 PF17871 AAA lid domain M483_178 PF06826 Predicted Permease Membrane Region M483_178 PF02080 TrkA-C domain M483_1780 PF04717 Type VI secretion system, phage-baseplate injector M483_1787 PF00691 OmpA family M483_1787 PF05736 OprF membrane domain M483_1790 PF18337 RapA N-terminal Tudor like domain M483_1790 PF12137 RNA polymerase recycling family C-terminal M483_1790 PF00271 Helicase conserved C-terminal domain M483_1790 PF18339 RapA N-terminal Tudor like domain 1 M483_1790 PF00176 SNF2 family N-terminal domain M483_1791 PF00136 DNA polymerase family B M483_1791 PF03104 DNA polymerase family B, exonuclease domain M483_1792 PF09335 SNARE associated Golgi protein M483_1793 PF00005 ABC transporter M483_1794 PF00528 Binding-protein-dependent transport system inner membrane component M483_1797 PF12793 Sugar transport-related sRNA regulator N-term M483_1797 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_1798 PF07690 Major Facilitator Superfamily M483_1799 PF00694 Aconitase C-terminal domain M483_18 PF00872 Transposase, Mutator family M483_180 PF01569 PAP2 superfamily M483_1800 PF00330 Aconitase family (aconitate hydratase) M483_1801 PF00180 Isocitrate/isopropylmalate dehydrogenase M483_1802 PF00682 HMGL-like M483_1802 PF08502 LeuA allosteric (dimerisation) domain M483_1804 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_1804 PF03466 LysR substrate binding domain M483_1805 PF00501 AMP-binding enzyme M483_1806 PF00872 Transposase, Mutator family M483_1807 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M483_1807 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M483_1807 PF00205 Thiamine pyrophosphate enzyme, central domain M483_1808 PF10369 Small subunit of acetolactate synthase M483_1809 PF01797 Transposase IS200 like M483_181 PF01791 DeoC/LacD family aldolase M483_1810 PF00356 Bacterial regulatory proteins, lacI family M483_1810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M483_1811 PF01797 Transposase IS200 like M483_1812 PF06610 L-alanine exporter M483_1813 PF02381 MraZ protein, putative antitoxin-like M483_1814 PF01795 MraW methylase family M483_1815 PF04999 Cell division protein FtsL M483_1816 PF00905 Penicillin binding protein transpeptidase domain M483_1816 PF03717 Penicillin-binding Protein dimerisation domain M483_1817 PF01225 Mur ligase family, catalytic domain M483_1817 PF08245 Mur ligase middle domain M483_1817 PF02875 Mur ligase family, glutamate ligase domain M483_1818 PF08245 Mur ligase middle domain M483_1818 PF02875 Mur ligase family, glutamate ligase domain M483_1818 PF01225 Mur ligase family, catalytic domain M483_1819 PF00953 Glycosyl transferase family 4 M483_1819 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M483_182 PF08220 DeoR-like helix-turn-helix domain M483_182 PF00455 DeoR C terminal sensor domain M483_1820 PF08245 Mur ligase middle domain M483_1820 PF02875 Mur ligase family, glutamate ligase domain M483_1821 PF01098 Cell cycle protein M483_1822 PF04101 Glycosyltransferase family 28 C-terminal domain M483_1822 PF03033 Glycosyltransferase family 28 N-terminal domain M483_1823 PF02875 Mur ligase family, glutamate ligase domain M483_1823 PF01225 Mur ligase family, catalytic domain M483_1823 PF08245 Mur ligase middle domain M483_1824 PF07478 D-ala D-ala ligase C-terminus M483_1824 PF01820 D-ala D-ala ligase N-terminus M483_1825 PF08478 POTRA domain, FtsQ-type M483_1825 PF03799 Cell division protein FtsQ M483_1826 PF02491 SHS2 domain inserted in FTSA M483_1827 PF00091 Tubulin/FtsZ family, GTPase domain M483_1827 PF12327 FtsZ family, C-terminal domain M483_1828 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M483_1830 PF06558 Secretion monitor precursor protein (SecM) M483_1831 PF02810 SEC-C motif M483_1831 PF07517 SecA DEAD-like domain M483_1831 PF01043 SecA preprotein cross-linking domain M483_1831 PF07516 SecA Wing and Scaffold domain M483_1832 PF00293 NUDIX domain M483_1833 PF01695 IstB-like ATP binding protein M483_1834 PF00665 Integrase core domain M483_1834 PF02796 Helix-turn-helix domain of resolvase M483_1835 PF01797 Transposase IS200 like M483_1836 PF03884 DNA gyrase inhibitor YacG M483_1837 PF07072 Cell division protein M483_1838 PF01121 Dephospho-CoA kinase M483_1839 PF00478 IMP dehydrogenase / GMP reductase domain M483_184 PF07943 Penicillin-binding protein 5, C-terminal domain M483_184 PF00768 D-alanyl-D-alanine carboxypeptidase M483_1840 PF00482 Type II secretion system (T2SS), protein F M483_1841 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M483_1841 PF00437 Type II/IV secretion system protein M483_1842 PF07963 Prokaryotic N-terminal methylation motif M483_1843 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M483_1843 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M483_1844 PF01510 N-acetylmuramoyl-L-alanine amidase M483_1845 PF17113 Regulatory signalling modulator protein AmpE M483_1846 PF00324 Amino acid permease M483_1847 PF00392 Bacterial regulatory proteins, gntR family M483_1847 PF07729 FCD domain M483_1848 PF17831 Pyruvate dehydrogenase E1 component middle domain M483_1848 PF00456 Transketolase, thiamine diphosphate binding domain M483_1849 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M483_1849 PF00364 Biotin-requiring enzyme M483_1849 PF02817 e3 binding domain M483_185 PF00528 Binding-protein-dependent transport system inner membrane component M483_1850 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_1850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M483_1852 PF11791 Aconitate B N-terminal domain M483_1852 PF06434 Aconitate hydratase 2 N-terminus M483_1852 PF00330 Aconitase family (aconitate hydratase) M483_1853 PF06062 Uncharacterised protein family (UPF0231) M483_1854 PF00892 EamA-like transporter family M483_1855 PF02675 S-adenosylmethionine decarboxylase M483_1856 PF17284 Spermidine synthase tetramerisation domain M483_1857 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) M483_1858 PF07732 Multicopper oxidase M483_1858 PF10518 TAT (twin-arginine translocation) pathway signal sequence M483_1858 PF07731 Multicopper oxidase M483_1858 PF00394 Multicopper oxidase M483_1859 PF00156 Phosphoribosyl transferase domain M483_186 PF09383 NIL domain M483_186 PF00005 ABC transporter M483_1860 PF00484 Carbonic anhydrase M483_1861 PF00005 ABC transporter M483_1862 PF01061 ABC-2 type transporter M483_1864 PF01522 Polysaccharide deacetylase M483_1865 PF02261 Aspartate decarboxylase M483_1866 PF02569 Pantoate-beta-alanine ligase M483_1867 PF02548 Ketopantoate hydroxymethyltransferase M483_1868 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M483_1869 PF12627 Probable RNA and SrmB- binding site of polymerase A M483_1869 PF01743 Poly A polymerase head domain M483_1869 PF12626 Polymerase A arginine-rich C-terminus M483_187 PF03180 NLPA lipoprotein M483_1870 PF00749 tRNA synthetases class I (E and Q), catalytic domain M483_1871 PF01258 Prokaryotic dksA/traR C4-type zinc finger M483_1872 PF17746 SfsA N-terminal OB domain M483_1872 PF03749 Sugar fermentation stimulation protein RE domain M483_1873 PF02834 LigT like Phosphoesterase M483_1874 PF00271 Helicase conserved C-terminal domain M483_1874 PF08482 ATP-dependent helicase C-terminal M483_1874 PF00270 DEAD/DEAH box helicase M483_1874 PF04408 Helicase associated domain (HA2) M483_1875 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal M483_1875 PF00912 Transglycosylase M483_1875 PF14814 Bifunctional transglycosylase second domain M483_1875 PF00905 Penicillin binding protein transpeptidase domain M483_1876 PF00005 ABC transporter M483_1877 PF01497 Periplasmic binding protein M483_1878 PF01032 FecCD transport family M483_1879 PF00202 Aminotransferase class-III M483_1880 PF00654 Voltage gated chloride channel M483_1881 PF01521 Iron-sulphur cluster biosynthesis M483_1882 PF03458 UPF0126 domain M483_1883 PF01497 Periplasmic binding protein M483_1884 PF01048 Phosphorylase superfamily M483_1885 PF13286 Phosphohydrolase-associated domain M483_1885 PF01966 HD domain M483_1886 PF00595 PDZ domain M483_1887 PF00512 His Kinase A (phospho-acceptor) domain M483_1887 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M483_1887 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_1887 PF01627 Hpt domain M483_1887 PF00072 Response regulator receiver domain M483_1887 PF00672 HAMP domain M483_1888 PF13291 ACT domain M483_1888 PF04607 Region found in RelA / SpoT proteins M483_1888 PF02824 TGS domain M483_1889 PF03819 MazG nucleotide pyrophosphohydrolase domain M483_1890 PF00117 Glutamine amidotransferase class-I M483_1890 PF06418 CTP synthase N-terminus M483_1891 PF03952 Enolase, N-terminal domain M483_1891 PF00113 Enolase, C-terminal TIM barrel domain M483_1892 PF00080 Copper/zinc superoxide dismutase (SODC) M483_1893 PF04055 Radical SAM superfamily M483_1894 PF01242 6-pyruvoyl tetrahydropterin synthase M483_1895 PF00175 Oxidoreductase NAD-binding domain M483_1895 PF00258 Flavodoxin M483_1895 PF00667 FAD binding domain M483_1896 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M483_1896 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M483_1897 PF01507 Phosphoadenosine phosphosulfate reductase family M483_1898 PF01507 Phosphoadenosine phosphosulfate reductase family M483_190 PF00043 Glutathione S-transferase, C-terminal domain M483_190 PF13417 Glutathione S-transferase, N-terminal domain M483_1902 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M483_1902 PF14824 Sirohaem biosynthesis protein central M483_1902 PF10414 Sirohaem synthase dimerisation region M483_1903 PF01507 Phosphoadenosine phosphosulfate reductase family M483_1904 PF00009 Elongation factor Tu GTP binding domain M483_1906 PF12084 Protein of unknown function (DUF3561) M483_1907 PF04977 Septum formation initiator M483_1908 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M483_1909 PF02542 YgbB family M483_191 PF07715 TonB-dependent Receptor Plug Domain M483_191 PF00593 TonB dependent receptor M483_1910 PF01142 tRNA pseudouridine synthase D (TruD) M483_1911 PF01975 Survival protein SurE M483_1913 PF01551 Peptidase family M23 M483_1913 PF01476 LysM domain M483_1914 PF04545 Sigma-70, region 4 M483_1914 PF04539 Sigma-70 region 3 M483_1914 PF00140 Sigma-70 factor, region 1.2 M483_1914 PF04542 Sigma-70 region 2 M483_1915 PF05190 MutS family domain IV M483_1915 PF00488 MutS domain V M483_1915 PF05188 MutS domain II M483_1915 PF01624 MutS domain I M483_1915 PF05192 MutS domain III M483_1916 PF02502 Ribose/Galactose Isomerase M483_1917 PF00107 Zinc-binding dehydrogenase M483_1917 PF08240 Alcohol dehydrogenase GroES-like domain M483_1919 PF02733 Dak1 domain M483_192 PF00005 ABC transporter M483_1920 PF02734 DAK2 domain M483_1921 PF13936 Helix-turn-helix domain M483_1921 PF04198 Putative sugar-binding domain M483_1922 PF02040 Arsenical pump membrane protein M483_1923 PF01022 Bacterial regulatory protein, arsR family M483_1926 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_1927 PF00034 Cytochrome c M483_1927 PF14376 Haem-binding domain M483_1927 PF03150 Di-haem cytochrome c peroxidase M483_1929 PF00593 TonB dependent receptor M483_1929 PF07715 TonB-dependent Receptor Plug Domain M483_193 PF01032 FecCD transport family M483_1931 PF00557 Metallopeptidase family M24 M483_1933 PF05683 Fumarase C-terminus M483_1933 PF05681 Fumarate hydratase (Fumerase) M483_1934 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_1934 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_1935 PF01261 Xylose isomerase-like TIM barrel M483_1936 PF02653 Branched-chain amino acid transport system / permease component M483_1937 PF02653 Branched-chain amino acid transport system / permease component M483_1938 PF00005 ABC transporter M483_1940 PF00455 DeoR C terminal sensor domain M483_1940 PF08220 DeoR-like helix-turn-helix domain M483_1941 PF00596 Class II Aldolase and Adducin N-terminal domain M483_1942 PF01568 Molydopterin dinucleotide binding domain M483_1942 PF00384 Molybdopterin oxidoreductase M483_1942 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M483_1943 PF12800 4Fe-4S binding domain M483_1943 PF13247 4Fe-4S dicluster domain M483_1944 PF04976 DMSO reductase anchor subunit (DmsC) M483_1945 PF02613 Nitrate reductase delta subunit M483_1946 PF01292 Prokaryotic cytochrome b561 M483_1947 PF07361 Cytochrome b562 M483_1948 PF00141 Peroxidase M483_195 PF01797 Transposase IS200 like M483_1951 PF00005 ABC transporter M483_1952 PF02653 Branched-chain amino acid transport system / permease component M483_1953 PF00456 Transketolase, thiamine diphosphate binding domain M483_1954 PF02779 Transketolase, pyrimidine binding domain M483_1954 PF02780 Transketolase, C-terminal domain M483_1955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_1955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_1958 PF07690 Major Facilitator Superfamily M483_1959 PF02464 Competence-damaged protein M483_196 PF00324 Amino acid permease M483_1960 PF00154 recA bacterial DNA recombination protein M483_1961 PF02631 RecX family M483_1962 PF02272 DHHA1 domain M483_1962 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M483_1962 PF01411 tRNA synthetases class II (A) M483_1963 PF02599 Global regulator protein family M483_1967 PF13419 Haloacid dehalogenase-like hydrolase M483_1968 PF09335 SNARE associated Golgi protein M483_1969 PF04262 Glutamate-cysteine ligase M483_1970 PF02664 S-Ribosylhomocysteinase (LuxS) M483_1971 PF01797 Transposase IS200 like M483_1972 PF00571 CBS domain M483_1972 PF01595 Cyclin M transmembrane N-terminal domain M483_1972 PF03471 Transporter associated domain M483_1973 PF01578 Cytochrome C assembly protein M483_1974 PF02881 SRP54-type protein, helical bundle domain M483_1974 PF02978 Signal peptide binding domain M483_1974 PF00448 SRP54-type protein, GTPase domain M483_1975 PF00886 Ribosomal protein S16 M483_1976 PF01782 RimM N-terminal domain M483_1976 PF05239 PRC-barrel domain M483_1977 PF01746 tRNA (Guanine-1)-methyltransferase M483_1978 PF01245 Ribosomal protein L19 M483_1979 PF04338 Protein of unknown function, DUF481 M483_198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_198 PF03466 LysR substrate binding domain M483_1980 PF03605 Anaerobic c4-dicarboxylate membrane transporter M483_1981 PF03605 Anaerobic c4-dicarboxylate membrane transporter M483_1982 PF04397 LytTr DNA-binding domain M483_1982 PF00072 Response regulator receiver domain M483_1983 PF00793 DAHP synthetase I family M483_1984 PF02796 Helix-turn-helix domain of resolvase M483_1984 PF00665 Integrase core domain M483_1985 PF01695 IstB-like ATP binding protein M483_1986 PF00793 DAHP synthetase I family M483_1987 PF01817 Chorismate mutase type II M483_1987 PF02153 Prephenate dehydrogenase M483_1988 PF01817 Chorismate mutase type II M483_1988 PF00800 Prephenate dehydratase M483_1989 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M483_199 PF03601 Conserved hypothetical protein 698 M483_1990 PF13525 Outer membrane lipoprotein M483_1991 PF00849 RNA pseudouridylate synthase M483_1991 PF01479 S4 domain M483_1993 PF17871 AAA lid domain M483_1993 PF02861 Clp amino terminal domain, pathogenicity island component M483_1993 PF10431 C-terminal, D2-small domain, of ClpB protein M483_1993 PF00004 ATPase family associated with various cellular activities (AAA) M483_1993 PF07724 AAA domain (Cdc48 subfamily) M483_2 PF00005 ABC transporter M483_2 PF08402 TOBE domain M483_200 PF01261 Xylose isomerase-like TIM barrel M483_2002 PF04204 Homoserine O-succinyltransferase M483_2003 PF01274 Malate synthase M483_2004 PF00463 Isocitrate lyase family M483_2005 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M483_2006 PF09339 IclR helix-turn-helix domain M483_2006 PF01614 Bacterial transcriptional regulator M483_2007 PF00809 Pterin binding enzyme M483_2007 PF02310 B12 binding domain M483_2007 PF02607 B12 binding domain M483_2007 PF02574 Homocysteine S-methyltransferase M483_2007 PF02965 Vitamin B12 dependent methionine synthase, activation domain M483_2008 PF13332 Hemagglutinin repeat M483_2008 PF05860 haemagglutination activity domain M483_2009 PF13332 Hemagglutinin repeat M483_2009 PF05860 haemagglutination activity domain M483_201 PF13954 PapC N-terminal domain M483_201 PF13953 PapC C-terminal domain M483_201 PF00577 Outer membrane usher protein M483_2010 PF08479 POTRA domain, ShlB-type M483_2010 PF17287 POTRA domain M483_2010 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M483_2011 PF01842 ACT domain M483_2011 PF00696 Amino acid kinase family M483_2012 PF00342 Phosphoglucose isomerase M483_2013 PF06146 Phosphate-starvation-inducible E M483_2014 PF00528 Binding-protein-dependent transport system inner membrane component M483_2015 PF00528 Binding-protein-dependent transport system inner membrane component M483_2015 PF14785 Maltose transport system permease protein MalF P2 domain M483_2016 PF01547 Bacterial extracellular solute-binding protein M483_2018 PF17912 MalK OB fold domain M483_2018 PF00005 ABC transporter M483_2019 PF02264 LamB porin M483_202 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_202 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_2020 PF07148 Maltose operon periplasmic protein precursor (MalM) M483_2022 PF05638 Type VI secretion system effector, Hcp M483_2026 PF13276 HTH-like domain M483_2026 PF13333 Integrase core domain M483_2026 PF00665 Integrase core domain M483_2035 PF07724 AAA domain (Cdc48 subfamily) M483_2035 PF17871 AAA lid domain M483_2035 PF10431 C-terminal, D2-small domain, of ClpB protein M483_2035 PF00004 ATPase family associated with various cellular activities (AAA) M483_204 PF17550 Family of unknown function M483_2042 PF04717 Type VI secretion system, phage-baseplate injector M483_2043 PF04717 Type VI secretion system, phage-baseplate injector M483_2046 PF03527 RHS protein M483_2046 PF14220 Domain of unknown function (DUF4329) M483_2046 PF05593 RHS Repeat M483_205 PF00486 Transcriptional regulatory protein, C terminal M483_2052 PF04717 Type VI secretion system, phage-baseplate injector M483_2054 PF05593 RHS Repeat M483_2054 PF03527 RHS protein M483_2057 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_2057 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M483_2058 PF12833 Helix-turn-helix domain M483_2058 PF02311 AraC-like ligand binding domain M483_2059 PF05025 RbsD / FucU transport protein family M483_206 PF02378 Phosphotransferase system, EIIC M483_206 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M483_2060 PF00294 pfkB family carbohydrate kinase M483_2062 PF03358 NADPH-dependent FMN reductase M483_2063 PF09084 NMT1/THI5 like M483_2064 PF00296 Luciferase-like monooxygenase M483_2065 PF00528 Binding-protein-dependent transport system inner membrane component M483_2066 PF00005 ABC transporter M483_2067 PF04221 RelB antitoxin M483_2068 PF00860 Permease family M483_2069 PF00999 Sodium/hydrogen exchanger family M483_207 PF00294 pfkB family carbohydrate kinase M483_2071 PF03279 Bacterial lipid A biosynthesis acyltransferase M483_2073 PF00005 ABC transporter M483_2074 PF02653 Branched-chain amino acid transport system / permease component M483_2076 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_2076 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_2077 PF00571 CBS domain M483_2077 PF01380 SIS domain M483_2078 PF02798 Glutathione S-transferase, N-terminal domain M483_208 PF00381 PTS HPr component phosphorylation site M483_208 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M483_2081 PF01797 Transposase IS200 like M483_2082 PF00313 'Cold-shock' DNA-binding domain M483_2083 PF00313 'Cold-shock' DNA-binding domain M483_2084 PF05433 Glycine zipper 2TM domain M483_2085 PF00753 Metallo-beta-lactamase superfamily M483_2086 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M483_2086 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M483_2087 PF02627 Carboxymuconolactone decarboxylase family M483_2088 PF07690 Major Facilitator Superfamily M483_209 PF00293 NUDIX domain M483_2091 PF02954 Bacterial regulatory protein, Fis family M483_2092 PF01207 Dihydrouridine synthase (Dus) M483_2094 PF00474 Sodium:solute symporter family M483_2095 PF06196 Protein of unknown function (DUF997) M483_2097 PF00289 Biotin carboxylase, N-terminal domain M483_2097 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M483_2097 PF02785 Biotin carboxylase C-terminal domain M483_2098 PF00364 Biotin-requiring enzyme M483_2099 PF01220 Dehydroquinase class II M483_210 PF02653 Branched-chain amino acid transport system / permease component M483_2100 PF01794 Ferric reductase like transmembrane component M483_2101 PF00174 Oxidoreductase molybdopterin binding domain M483_2102 PF00107 Zinc-binding dehydrogenase M483_2102 PF08240 Alcohol dehydrogenase GroES-like domain M483_2103 PF00563 EAL domain M483_2103 PF17157 Gammaproteobacterial periplasmic sensor domain M483_2103 PF00990 Diguanylate cyclase, GGDEF domain M483_2105 PF04085 rod shape-determining protein MreC M483_2106 PF04093 rod shape-determining protein MreD M483_2107 PF02545 Maf-like protein M483_2108 PF00575 S1 RNA binding domain M483_2108 PF10150 Ribonuclease E/G family M483_2109 PF13502 AsmA-like C-terminal region M483_2109 PF13116 Protein of unknown function M483_211 PF00005 ABC transporter M483_2110 PF00795 Carbon-nitrogen hydrolase M483_2111 PF01523 Putative modulator of DNA gyrase M483_2112 PF14431 YwqJ-like deaminase M483_2112 PF18807 Tripartite Tc toxins repeat M483_2113 PF18807 Tripartite Tc toxins repeat M483_2113 PF05785 Rho-activating domain of cytotoxic necrotizing factor M483_2117 PF03534 Salmonella virulence plasmid 65kDa B protein M483_2117 PF12255 Insecticide toxin TcdB middle/C-terminal region M483_2117 PF12256 Insecticide toxin TcdB middle/N-terminal region M483_2118 PF18413 Neuraminidase-like domain M483_2118 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain M483_2120 PF03466 LysR substrate binding domain M483_2120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2121 PF03466 LysR substrate binding domain M483_2121 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2122 PF07869 Protein of unknown function (DUF1656) M483_2123 PF13533 Biotin-lipoyl like M483_2124 PF04632 Fusaric acid resistance protein family M483_2125 PF00171 Aldehyde dehydrogenase family M483_2126 PF00171 Aldehyde dehydrogenase family M483_2128 PF01337 Barstar (barnase inhibitor) M483_2129 PF04751 Protein of unknown function (DUF615) M483_213 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M483_2130 PF01523 Putative modulator of DNA gyrase M483_2132 PF07361 Cytochrome b562 M483_2133 PF01272 Transcription elongation factor, GreA/GreB, C-term M483_2133 PF14760 Rnk N-terminus M483_2134 PF00128 Alpha amylase, catalytic domain M483_2134 PF11941 Domain of unknown function (DUF3459) M483_2135 PF00367 phosphotransferase system, EIIB M483_2135 PF02378 Phosphotransferase system, EIIC M483_2136 PF00356 Bacterial regulatory proteins, lacI family M483_2138 PF01042 Endoribonuclease L-PSP M483_2139 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M483_2139 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M483_214 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M483_214 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_2140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M483_2140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M483_2141 PF00381 PTS HPr component phosphorylation site M483_2142 PF03668 P-loop ATPase protein family M483_2143 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M483_2144 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M483_2145 PF00309 Sigma-54 factor, Activator interacting domain (AID) M483_2145 PF04963 Sigma-54 factor, core binding domain M483_2145 PF04552 Sigma-54, DNA binding domain M483_2146 PF12399 Branched-chain amino acid ATP-binding cassette transporter M483_2146 PF00005 ABC transporter M483_2147 PF03968 OstA-like protein M483_2148 PF06835 Lipopolysaccharide-assembly, LptC-related M483_215 PF00171 Aldehyde dehydrogenase family M483_2150 PF01380 SIS domain M483_2150 PF00571 CBS domain M483_2151 PF01699 Sodium/calcium exchanger protein M483_2152 PF00005 ABC transporter M483_2153 PF02405 Permease MlaE M483_2154 PF02470 MlaD protein M483_2155 PF05494 MlaC protein M483_2156 PF13466 STAS domain M483_2157 PF01722 BolA-like protein M483_2158 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M483_2159 PF13180 PDZ domain M483_2160 PF01797 Transposase IS200 like M483_2161 PF13180 PDZ domain M483_2161 PF00595 PDZ domain M483_2162 PF06295 Protein of unknown function (DUF1043) M483_2163 PF03969 AFG1-like ATPase M483_2164 PF00572 Ribosomal protein L13 M483_2165 PF00380 Ribosomal protein S9/S16 M483_2166 PF02798 Glutathione S-transferase, N-terminal domain M483_2166 PF00043 Glutathione S-transferase, C-terminal domain M483_2167 PF04386 Stringent starvation protein B M483_2169 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M483_2169 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_217 PF01842 ACT domain M483_217 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M483_217 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M483_2170 PF04898 Glutamate synthase central domain M483_2170 PF01645 Conserved region in glutamate synthase M483_2170 PF01493 GXGXG motif M483_2170 PF00310 Glutamine amidotransferases class-II M483_2171 PF04055 Radical SAM superfamily M483_2171 PF16199 Radical_SAM C-terminal domain M483_2172 PF00512 His Kinase A (phospho-acceptor) domain M483_2172 PF01627 Hpt domain M483_2172 PF00989 PAS fold M483_2172 PF00072 Response regulator receiver domain M483_2172 PF18415 Histidine kinase receptor ArcB trans-membrane domain M483_2172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_2174 PF00912 Transglycosylase M483_2175 PF04972 BON domain M483_2176 PF13580 SIS domain M483_2177 PF02021 Uncharacterised protein family UPF0102 M483_2178 PF04348 LppC putative lipoprotein M483_2179 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M483_2180 PF02678 Pirin M483_2180 PF17954 Quercetinase C-terminal cupin domain M483_2181 PF03466 LysR substrate binding domain M483_2181 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2182 PF13409 Glutathione S-transferase, N-terminal domain M483_2183 PF07681 DoxX M483_2185 PF07332 Putative Actinobacterial Holin-X, holin superfamily III M483_2186 PF05957 Bacterial protein of unknown function (DUF883) M483_2188 PF13721 SecD export protein N-terminal TM region M483_2189 PF09335 SNARE associated Golgi protein M483_219 PF03692 Putative zinc- or iron-chelating domain M483_2191 PF07729 FCD domain M483_2191 PF00392 Bacterial regulatory proteins, gntR family M483_2192 PF07690 Major Facilitator Superfamily M483_2193 PF07690 Major Facilitator Superfamily M483_2194 PF02614 Glucuronate isomerase M483_2195 PF08125 Mannitol dehydrogenase C-terminal domain M483_2195 PF01232 Mannitol dehydrogenase Rossmann domain M483_2196 PF08666 SAF domain M483_2196 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M483_2197 PF10688 Bacterial inner membrane protein M483_2199 PF01797 Transposase IS200 like M483_220 PF03222 Tryptophan/tyrosine permease family M483_2201 PF00375 Sodium:dicarboxylate symporter family M483_2202 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_2203 PF01863 Protein of unknown function DUF45 M483_2204 PF03797 Autotransporter beta-domain M483_2205 PF05175 Methyltransferase small domain M483_2206 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_2206 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M483_2207 PF03729 Short repeat of unknown function (DUF308) M483_221 PF09285 Elongation factor P, C-terminal M483_221 PF01132 Elongation factor P (EF-P) OB domain M483_221 PF08207 Elongation factor P (EF-P) KOW-like domain M483_2210 PF00092 von Willebrand factor type A domain M483_2212 PF02342 TerD domain M483_2213 PF00092 von Willebrand factor type A domain M483_2214 PF17287 POTRA domain M483_2214 PF08479 POTRA domain, ShlB-type M483_2214 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M483_2215 PF13018 Extended Signal Peptide of Type V secretion system M483_2215 PF13332 Hemagglutinin repeat M483_2215 PF04829 Pre-toxin domain with VENN motif M483_2215 PF05860 haemagglutination activity domain M483_2217 PF13332 Hemagglutinin repeat M483_2217 PF13018 Extended Signal Peptide of Type V secretion system M483_2217 PF04829 Pre-toxin domain with VENN motif M483_2217 PF05860 haemagglutination activity domain M483_2219 PF13018 Extended Signal Peptide of Type V secretion system M483_2219 PF13332 Hemagglutinin repeat M483_2219 PF04829 Pre-toxin domain with VENN motif M483_2219 PF05860 haemagglutination activity domain M483_222 PF03786 D-mannonate dehydratase (UxuA) M483_2223 PF00005 ABC transporter M483_2223 PF17912 MalK OB fold domain M483_2223 PF03459 TOBE domain M483_2224 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M483_2225 PF00356 Bacterial regulatory proteins, lacI family M483_2226 PF13416 Bacterial extracellular solute-binding protein M483_2227 PF00528 Binding-protein-dependent transport system inner membrane component M483_2228 PF00528 Binding-protein-dependent transport system inner membrane component M483_223 PF08125 Mannitol dehydrogenase C-terminal domain M483_223 PF01232 Mannitol dehydrogenase Rossmann domain M483_2230 PF14310 Fibronectin type III-like domain M483_2230 PF00933 Glycosyl hydrolase family 3 N terminal domain M483_2230 PF01915 Glycosyl hydrolase family 3 C-terminal domain M483_2232 PF04632 Fusaric acid resistance protein family M483_2233 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_2233 PF00529 HlyD membrane-fusion protein of T1SS M483_224 PF07729 FCD domain M483_224 PF00392 Bacterial regulatory proteins, gntR family M483_2240 PF01042 Endoribonuclease L-PSP M483_2244 PF03466 LysR substrate binding domain M483_2244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2245 PF01695 IstB-like ATP binding protein M483_2246 PF00665 Integrase core domain M483_2246 PF02796 Helix-turn-helix domain of resolvase M483_2257 PF04546 Sigma-70, non-essential region M483_2257 PF03979 Sigma-70 factor, region 1.1 M483_2257 PF00140 Sigma-70 factor, region 1.2 M483_2257 PF04542 Sigma-70 region 2 M483_2257 PF04539 Sigma-70 region 3 M483_2257 PF04545 Sigma-70, region 4 M483_2258 PF10410 DnaB-helicase binding domain of primase M483_2258 PF08278 DNA primase DnaG DnaB-binding M483_2258 PF08275 DNA primase catalytic core, N-terminal domain M483_2258 PF01807 CHC2 zinc finger M483_2259 PF01165 Ribosomal protein S21 M483_226 PF02492 CobW/HypB/UreG, nucleotide-binding domain M483_226 PF07683 Cobalamin synthesis protein cobW C-terminal domain M483_2260 PF00814 Glycoprotease family M483_2261 PF02660 Glycerol-3-phosphate acyltransferase M483_2262 PF02152 Dihydroneopterin aldolase M483_2263 PF02673 Bacitracin resistance protein BacA M483_2264 PF01966 HD domain M483_2264 PF01743 Poly A polymerase head domain M483_2264 PF12627 Probable RNA and SrmB- binding site of polymerase A M483_2265 PF08239 Bacterial SH3 domain M483_2266 PF01928 CYTH domain M483_2267 PF03710 Glutamate-ammonia ligase adenylyltransferase M483_2267 PF08335 GlnD PII-uridylyltransferase M483_2268 PF01467 Cytidylyltransferase-like M483_2268 PF00294 pfkB family carbohydrate kinase M483_2269 PF13520 Amino acid permease M483_227 PF01569 PAP2 superfamily M483_2270 PF04380 Membrane fusogenic activity M483_2272 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M483_2273 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M483_2274 PF03738 Glutathionylspermidine synthase preATP-grasp M483_2275 PF06693 Protein of unknown function (DUF1190) M483_2277 PF02321 Outer membrane efflux protein M483_2278 PF00293 NUDIX domain M483_2279 PF06853 Protein of unknown function (DUF1249) M483_228 PF00877 NlpC/P60 family M483_2280 PF00149 Calcineurin-like phosphoesterase M483_2281 PF05728 Uncharacterised protein family (UPF0227) M483_2282 PF00986 DNA gyrase B subunit, carboxyl terminus M483_2282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_2282 PF01751 Toprim domain M483_2282 PF00204 DNA gyrase B M483_2283 PF03466 LysR substrate binding domain M483_2283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2284 PF02525 Flavodoxin-like fold M483_2285 PF03989 DNA gyrase C-terminal domain, beta-propeller M483_2285 PF00521 DNA gyrase/topoisomerase IV, subunit A M483_2286 PF01553 Acyltransferase M483_2287 PF07731 Multicopper oxidase M483_2287 PF07732 Multicopper oxidase M483_2288 PF04055 Radical SAM superfamily M483_2288 PF08497 Radical SAM N-terminal M483_2288 PF11842 Domain of unknown function (DUF3362) M483_2289 PF04055 Radical SAM superfamily M483_2289 PF11842 Domain of unknown function (DUF3362) M483_2289 PF08497 Radical SAM N-terminal M483_2290 PF00248 Aldo/keto reductase family M483_2291 PF00465 Iron-containing alcohol dehydrogenase M483_2292 PF12833 Helix-turn-helix domain M483_2292 PF06719 AraC-type transcriptional regulator N-terminus M483_2293 PF09335 SNARE associated Golgi protein M483_2294 PF01053 Cys/Met metabolism PLP-dependent enzyme M483_2295 PF01618 MotA/TolQ/ExbB proton channel family M483_2297 PF02472 Biopolymer transport protein ExbD/TolR M483_230 PF00563 EAL domain M483_230 PF12792 CSS motif domain associated with EAL M483_2304 PF00437 Type II/IV secretion system protein M483_2307 PF00263 Bacterial type II and III secretion system protein M483_2307 PF04972 BON domain M483_2307 PF13629 Pilus formation protein N terminal region M483_2308 PF13629 Pilus formation protein N terminal region M483_2308 PF00263 Bacterial type II and III secretion system protein M483_2308 PF04972 BON domain M483_231 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_2311 PF01797 Transposase IS200 like M483_2312 PF13953 PapC C-terminal domain M483_2312 PF13954 PapC N-terminal domain M483_2312 PF00577 Outer membrane usher protein M483_2313 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_2313 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_2315 PF00419 Fimbrial protein M483_2315 PF09222 Fimbrial adhesin F17-AG, lectin domain M483_2316 PF01497 Periplasmic binding protein M483_2319 PF00771 FHIPEP family M483_232 PF00528 Binding-protein-dependent transport system inner membrane component M483_2320 PF01312 FlhB HrpN YscU SpaS Family M483_2321 PF01311 Bacterial export proteins, family 1 M483_2322 PF01313 Bacterial export proteins, family 3 M483_2323 PF00813 FliP family M483_2324 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M483_2326 PF00072 Response regulator receiver domain M483_2326 PF00158 Sigma-54 interaction domain M483_2326 PF02954 Bacterial regulatory protein, Fis family M483_2327 PF02049 Flagellar hook-basal body complex protein FliE M483_2328 PF01514 Secretory protein of YscJ/FliF family M483_2328 PF08345 Flagellar M-ring protein C-terminal M483_233 PF00528 Binding-protein-dependent transport system inner membrane component M483_233 PF12911 N-terminal TM domain of oligopeptide transport permease C M483_2331 PF18269 T3SS EscN ATPase C-terminal domain M483_2331 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M483_2335 PF13144 Chaperone for flagella basal body P-ring formation M483_2336 PF00460 Flagella basal body rod protein M483_2337 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2337 PF00460 Flagella basal body rod protein M483_2338 PF13860 FlgD Ig-like domain M483_2338 PF03963 Flagellar hook capping protein - N-terminal region M483_2338 PF13861 FlgD Tudor-like domain M483_2339 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2339 PF07559 Flagellar basal body protein FlaE M483_2339 PF00460 Flagella basal body rod protein M483_234 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_234 PF00005 ABC transporter M483_2340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2340 PF00460 Flagella basal body rod protein M483_2341 PF00460 Flagella basal body rod protein M483_2341 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2342 PF02107 Flagellar L-ring protein M483_2343 PF02119 Flagellar P-ring protein M483_2345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2345 PF00460 Flagella basal body rod protein M483_2349 PF18500 CadC C-terminal domain 1 M483_2349 PF00486 Transcriptional regulatory protein, C terminal M483_235 PF13989 YejG-like protein M483_2350 PF00669 Bacterial flagellin N-terminal helical region M483_2350 PF00700 Bacterial flagellin C-terminal helical region M483_2351 PF00669 Bacterial flagellin N-terminal helical region M483_2351 PF00700 Bacterial flagellin C-terminal helical region M483_2352 PF00669 Bacterial flagellin N-terminal helical region M483_2352 PF00700 Bacterial flagellin C-terminal helical region M483_2353 PF00669 Bacterial flagellin N-terminal helical region M483_2353 PF00700 Bacterial flagellin C-terminal helical region M483_2354 PF07195 Flagellar hook-associated protein 2 C-terminus M483_2354 PF07196 Flagellin hook IN motif M483_2354 PF02465 Flagellar hook-associated protein 2 N-terminus M483_2359 PF04542 Sigma-70 region 2 M483_2359 PF04545 Sigma-70, region 4 M483_236 PF07690 Major Facilitator Superfamily M483_2360 PF01618 MotA/TolQ/ExbB proton channel family M483_2361 PF00691 OmpA family M483_2361 PF13677 Membrane MotB of proton-channel complex MotA/MotB M483_2365 PF05433 Glycine zipper 2TM domain M483_2368 PF13333 Integrase core domain M483_2368 PF00665 Integrase core domain M483_2368 PF13276 HTH-like domain M483_237 PF01479 S4 domain M483_237 PF00849 RNA pseudouridylate synthase M483_2370 PF00593 TonB dependent receptor M483_2370 PF07715 TonB-dependent Receptor Plug Domain M483_2371 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M483_2372 PF04183 IucA / IucC family M483_2372 PF06276 Ferric iron reductase FhuF-like transporter M483_2374 PF06276 Ferric iron reductase FhuF-like transporter M483_2374 PF04183 IucA / IucC family M483_2375 PF04183 IucA / IucC family M483_2375 PF06276 Ferric iron reductase FhuF-like transporter M483_2379 PF00765 Autoinducer synthase M483_238 PF04851 Type III restriction enzyme, res subunit M483_238 PF00271 Helicase conserved C-terminal domain M483_2380 PF00196 Bacterial regulatory proteins, luxR family M483_2380 PF03472 Autoinducer binding domain M483_2382 PF02517 CPBP intramembrane metalloprotease M483_2384 PF12759 InsA C-terminal domain M483_2384 PF03811 InsA N-terminal domain M483_239 PF01386 Ribosomal L25p family M483_2391 PF00691 OmpA family M483_2391 PF05736 OprF membrane domain M483_2393 PF10431 C-terminal, D2-small domain, of ClpB protein M483_2393 PF17871 AAA lid domain M483_2393 PF07724 AAA domain (Cdc48 subfamily) M483_2393 PF00004 ATPase family associated with various cellular activities (AAA) M483_2397 PF12759 InsA C-terminal domain M483_2397 PF03811 InsA N-terminal domain M483_2398 PF03400 IS1 transposase M483_24 PF05638 Type VI secretion system effector, Hcp M483_240 PF01797 Transposase IS200 like M483_2400 PF02899 Phage integrase, N-terminal SAM-like domain M483_2400 PF00589 Phage integrase family M483_2402 PF01276 Orn/Lys/Arg decarboxylase, major domain M483_2402 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M483_2402 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M483_2403 PF13407 Periplasmic binding protein domain M483_2404 PF00005 ABC transporter M483_2405 PF02653 Branched-chain amino acid transport system / permease component M483_2406 PF07715 TonB-dependent Receptor Plug Domain M483_2408 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M483_2408 PF01464 Transglycosylase SLT domain M483_2409 PF04362 Bacterial Fe(2+) trafficking M483_241 PF04245 37-kD nucleoid-associated bacterial protein M483_2410 PF00633 Helix-hairpin-helix motif M483_2410 PF14815 NUDIX domain M483_2410 PF00730 HhH-GPD superfamily base excision DNA repair protein M483_2410 PF10576 Iron-sulfur binding domain of endonuclease III M483_2411 PF02390 Putative methyltransferase M483_2412 PF04320 Protein with unknown function (DUF469) M483_2413 PF04960 Glutaminase M483_2414 PF11101 Protein of unknown function (DUF2884) M483_2415 PF11101 Protein of unknown function (DUF2884) M483_2416 PF12146 Serine aminopeptidase, S33 M483_2416 PF11647 Membrane Localization Domain M483_2416 PF11713 Peptidase C80 family M483_2416 PF07634 RtxA repeat M483_2416 PF16671 Actin cross-linking domain M483_2417 PF04055 Radical SAM superfamily M483_2417 PF06969 HemN C-terminal domain M483_2418 PF01725 Ham1 family M483_2419 PF02594 Uncharacterised ACR, YggU family COG1872 M483_242 PF07208 Protein of unknown function (DUF1414) M483_2420 PF02325 YGGT family M483_2421 PF03807 NADP oxidoreductase coenzyme F420-dependent M483_2421 PF14748 Pyrroline-5-carboxylate reductase dimerisation M483_2422 PF01168 Alanine racemase, N-terminal domain M483_2423 PF00437 Type II/IV secretion system protein M483_2424 PF04371 Porphyromonas-type peptidyl-arginine deiminase M483_2425 PF00795 Carbon-nitrogen hydrolase M483_2426 PF03652 Holliday junction resolvase M483_2427 PF02622 Uncharacterized ACR, COG1678 M483_2428 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M483_2428 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M483_2429 PF04452 RNA methyltransferase M483_243 PF11893 Domain of unknown function (DUF3413) M483_243 PF00884 Sulfatase M483_2430 PF04231 Endonuclease I M483_2431 PF17283 SprT-like zinc ribbon domain M483_2431 PF10263 SprT-like family M483_2432 PF02772 S-adenosylmethionine synthetase, central domain M483_2432 PF00438 S-adenosylmethionine synthetase, N-terminal domain M483_2432 PF02773 S-adenosylmethionine synthetase, C-terminal domain M483_2434 PF17944 Arginine decarboxylase C-terminal helical extension M483_2434 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M483_2434 PF17810 Arginine decarboxylase helical bundle domain M483_2436 PF01435 Peptidase family M48 M483_2437 PF00456 Transketolase, thiamine diphosphate binding domain M483_2437 PF02779 Transketolase, pyrimidine binding domain M483_2437 PF02780 Transketolase, C-terminal domain M483_2438 PF01797 Transposase IS200 like M483_2439 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M483_2439 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M483_2440 PF00162 Phosphoglycerate kinase M483_2441 PF01116 Fructose-bisphosphate aldolase class-II M483_2442 PF00924 Mechanosensitive ion channel M483_2442 PF05552 Conserved TM helix M483_2443 PF01810 LysE type translocator M483_2444 PF04402 Protein of unknown function (DUF541) M483_2445 PF03466 LysR substrate binding domain M483_2445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2446 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M483_2447 PF01842 ACT domain M483_2447 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M483_2447 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M483_2448 PF01797 Transposase IS200 like M483_2449 PF01812 5-formyltetrahydrofolate cyclo-ligase family M483_2450 PF05164 Cell division protein ZapA M483_2451 PF03695 Uncharacterised protein family (UPF0149) M483_2452 PF00557 Metallopeptidase family M24 M483_2452 PF05195 Aminopeptidase P, N-terminal domain M483_2453 PF01494 FAD binding domain M483_2454 PF01494 FAD binding domain M483_2455 PF01571 Aminomethyltransferase folate-binding domain M483_2455 PF08669 Glycine cleavage T-protein C-terminal barrel domain M483_2456 PF01597 Glycine cleavage H-protein M483_2457 PF02347 Glycine cleavage system P-protein M483_246 PF05638 Type VI secretion system effector, Hcp M483_2460 PF13018 Extended Signal Peptide of Type V secretion system M483_2460 PF05662 Coiled stalk of trimeric autotransporter adhesin M483_2460 PF05658 Head domain of trimeric autotransporter adhesin M483_2460 PF03895 YadA-like membrane anchor domain M483_2462 PF03006 Haemolysin-III related M483_2464 PF01571 Aminomethyltransferase folate-binding domain M483_2465 PF03937 Flavinator of succinate dehydrogenase M483_2466 PF00072 Response regulator receiver domain M483_2466 PF00486 Transcriptional regulatory protein, C terminal M483_2467 PF00672 HAMP domain M483_2467 PF00512 His Kinase A (phospho-acceptor) domain M483_2467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_2468 PF06123 Inner membrane protein CreD M483_2469 PF00258 Flavodoxin M483_2470 PF02899 Phage integrase, N-terminal SAM-like domain M483_2470 PF00589 Phage integrase family M483_2471 PF13098 Thioredoxin-like domain M483_2471 PF10411 Disulfide bond isomerase protein N-terminus M483_2472 PF17768 RecJ OB domain M483_2472 PF02272 DHHA1 domain M483_2472 PF01368 DHH family M483_2473 PF03462 PCRF domain M483_2473 PF00472 RF-1 domain M483_2474 PF01336 OB-fold nucleic acid binding domain M483_2474 PF00152 tRNA synthetases class II (D, K and N) M483_2476 PF00589 Phage integrase family M483_2476 PF14659 Phage integrase, N-terminal SAM-like domain M483_2476 PF13356 Arm DNA-binding domain M483_2480 PF15723 Motility quorum-sensing regulator, toxin of MqsA M483_2481 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA M483_2498 PF03551 Transcriptional regulator PadR-like family M483_2499 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family M483_25 PF01797 Transposase IS200 like M483_250 PF00232 Glycosyl hydrolase family 1 M483_2501 PF13407 Periplasmic binding protein domain M483_2502 PF02653 Branched-chain amino acid transport system / permease component M483_2503 PF00005 ABC transporter M483_2504 PF17912 MalK OB fold domain M483_2504 PF00005 ABC transporter M483_2505 PF13416 Bacterial extracellular solute-binding protein M483_2506 PF00528 Binding-protein-dependent transport system inner membrane component M483_2507 PF00528 Binding-protein-dependent transport system inner membrane component M483_2508 PF07745 Glycosyl hydrolase family 53 M483_2509 PF08533 Beta-galactosidase C-terminal domain M483_2509 PF02449 Beta-galactosidase M483_2509 PF08532 Beta-galactosidase trimerisation domain M483_2510 PF08532 Beta-galactosidase trimerisation domain M483_2510 PF08533 Beta-galactosidase C-terminal domain M483_2510 PF02449 Beta-galactosidase M483_2511 PF00367 phosphotransferase system, EIIB M483_2511 PF02378 Phosphotransferase system, EIIC M483_2512 PF02264 LamB porin M483_2513 PF00356 Bacterial regulatory proteins, lacI family M483_2514 PF01055 Glycosyl hydrolases family 31 M483_2514 PF17137 Domain of unknown function (DUF5110) M483_2514 PF16338 Domain of unknown function (DUF4968) M483_2514 PF13802 Galactose mutarotase-like M483_2515 PF07690 Major Facilitator Superfamily M483_2516 PF00356 Bacterial regulatory proteins, lacI family M483_2519 PF01116 Fructose-bisphosphate aldolase class-II M483_252 PF01418 Helix-turn-helix domain, rpiR family M483_252 PF01380 SIS domain M483_2521 PF00884 Sulfatase M483_2522 PF04055 Radical SAM superfamily M483_2522 PF13186 Iron-sulfur cluster-binding domain M483_2525 PF01979 Amidohydrolase family M483_2526 PF03610 PTS system fructose IIA component M483_2527 PF03613 PTS system mannose/fructose/sorbose family IID component M483_2528 PF03609 PTS system sorbose-specific iic component M483_2529 PF03830 PTS system sorbose subfamily IIB component M483_253 PF07484 Phage Tail Collar Domain M483_2530 PF01380 SIS domain M483_2531 PF08013 Tagatose 6 phosphate kinase M483_2532 PF08220 DeoR-like helix-turn-helix domain M483_2532 PF00455 DeoR C terminal sensor domain M483_2533 PF00884 Sulfatase M483_2535 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M483_2535 PF09093 Lyase, catalytic M483_2535 PF02278 Polysaccharide lyase family 8, super-sandwich domain M483_2535 PF09092 Lyase, N terminal M483_2539 PF00484 Carbonic anhydrase M483_2542 PF00263 Bacterial type II and III secretion system protein M483_2542 PF03958 Bacterial type II/III secretion system short domain M483_2545 PF00482 Type II secretion system (T2SS), protein F M483_2546 PF08334 Type II secretion system (T2SS), protein G M483_2546 PF07963 Prokaryotic N-terminal methylation motif M483_2554 PF01478 Type IV leader peptidase family M483_2554 PF06750 Bacterial Peptidase A24 N-terminal domain M483_2556 PF00872 Transposase, Mutator family M483_256 PF04865 Baseplate J-like protein M483_2560 PF02203 Tar ligand binding domain homologue M483_2560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_2560 PF00672 HAMP domain M483_2562 PF03466 LysR substrate binding domain M483_2562 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2563 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2563 PF03466 LysR substrate binding domain M483_2564 PF07690 Major Facilitator Superfamily M483_2565 PF00356 Bacterial regulatory proteins, lacI family M483_2566 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M483_2566 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M483_2567 PF00384 Molybdopterin oxidoreductase M483_2567 PF01568 Molydopterin dinucleotide binding domain M483_2568 PF00501 AMP-binding enzyme M483_2568 PF01553 Acyltransferase M483_2568 PF13193 AMP-binding enzyme C-terminal domain M483_2569 PF07690 Major Facilitator Superfamily M483_2572 PF00248 Aldo/keto reductase family M483_2573 PF02976 DNA mismatch repair enzyme MutH M483_2574 PF00293 NUDIX domain M483_2575 PF02896 PEP-utilising enzyme, TIM barrel domain M483_2575 PF00391 PEP-utilising enzyme, mobile domain M483_2575 PF01590 GAF domain M483_2575 PF05524 PEP-utilising enzyme, N-terminal M483_2576 PF01790 Prolipoprotein diacylglyceryl transferase M483_2577 PF00303 Thymidylate synthase M483_2583 PF17946 RecC C-terminal domain M483_2584 PF16187 Middle or third domain of peptidase_M16 M483_2584 PF05193 Peptidase M16 inactive domain M483_2584 PF00675 Insulinase (Peptidase family M16) M483_2585 PF00580 UvrD/REP helicase N-terminal domain M483_2585 PF12705 PD-(D/E)XK nuclease superfamily M483_2585 PF13361 UvrD-like helicase C-terminal domain M483_2586 PF13538 UvrD-like helicase C-terminal domain M483_2587 PF00583 Acetyltransferase (GNAT) family M483_2587 PF00696 Amino acid kinase family M483_2588 PF01695 IstB-like ATP binding protein M483_2589 PF00665 Integrase core domain M483_2589 PF02796 Helix-turn-helix domain of resolvase M483_2590 PF00696 Amino acid kinase family M483_2590 PF00583 Acetyltransferase (GNAT) family M483_2591 PF01520 N-acetylmuramoyl-L-alanine amidase M483_2591 PF11741 AMIN domain M483_2594 PF03562 MltA specific insert domain M483_2594 PF06725 3D domain M483_2595 PF00899 ThiF family M483_2596 PF02657 Fe-S metabolism associated domain M483_2597 PF00266 Aminotransferase class-V M483_2599 PF03466 LysR substrate binding domain M483_2599 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_26 PF02540 NAD synthase M483_26 PF00117 Glutamine amidotransferase class-I M483_26 PF00958 GMP synthase C terminal domain M483_2600 PF04241 Protein of unknown function (DUF423) M483_2601 PF01728 FtsJ-like methyltransferase M483_2601 PF18125 RlmM ferredoxin-like domain M483_2602 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M483_2602 PF01367 5'-3' exonuclease, C-terminal SAM fold M483_2603 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M483_2603 PF11892 Domain of unknown function (DUF3412) M483_2603 PF03641 Possible lysine decarboxylase M483_2604 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M483_2604 PF14489 QueF-like protein M483_2605 PF07348 Syd protein (SUKH-2) M483_2606 PF01797 Transposase IS200 like M483_2607 PF04287 tRNA pseudouridine synthase C M483_2608 PF00849 RNA pseudouridylate synthase M483_2609 PF00258 Flavodoxin M483_2610 PF11944 Protein of unknown function (DUF3461) M483_2611 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M483_2611 PF14602 Hexapeptide repeat of succinyl-transferase M483_2611 PF00132 Bacterial transferase hexapeptide (six repeats) M483_2612 PF01966 HD domain M483_2612 PF01909 Nucleotidyltransferase domain M483_2612 PF08335 GlnD PII-uridylyltransferase M483_2612 PF01842 ACT domain M483_2613 PF00557 Metallopeptidase family M24 M483_2614 PF00318 Ribosomal protein S2 M483_2615 PF00889 Elongation factor TS M483_2616 PF00696 Amino acid kinase family M483_2617 PF01765 Ribosome recycling factor M483_2618 PF13288 DXP reductoisomerase C-terminal domain M483_2618 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M483_2618 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M483_2619 PF01255 Putative undecaprenyl diphosphate synthase M483_2621 PF17820 PDZ domain M483_2621 PF02163 Peptidase family M50 M483_2622 PF07244 Surface antigen variable number repeat M483_2622 PF01103 Surface antigen M483_2623 PF03938 Outer membrane protein (OmpH-like) M483_2624 PF00132 Bacterial transferase hexapeptide (six repeats) M483_2624 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M483_2625 PF07977 FabA-like domain M483_2626 PF00132 Bacterial transferase hexapeptide (six repeats) M483_2626 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M483_2627 PF02684 Lipid-A-disaccharide synthetase M483_2628 PF01351 Ribonuclease HII M483_2629 PF01336 OB-fold nucleic acid binding domain M483_2629 PF14579 Helix-hairpin-helix motif M483_2629 PF07733 Bacterial DNA polymerase III alpha NTPase domain M483_2629 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M483_2629 PF02811 PHP domain M483_2630 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M483_2631 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M483_2632 PF11734 TilS substrate C-terminal domain M483_2632 PF01171 PP-loop family M483_2632 PF09179 TilS substrate binding domain M483_2633 PF00034 Cytochrome c M483_2634 PF07073 Modulator of Rho-dependent transcription termination (ROF) M483_2635 PF06786 Uncharacterised protein family (UPF0253) M483_2636 PF07152 YaeQ protein M483_2637 PF00472 RF-1 domain M483_2638 PF17185 NlpE C-terminal OB domain M483_2638 PF04170 NlpE N-terminal domain M483_2639 PF03129 Anticodon binding domain M483_2639 PF04073 Aminoacyl-tRNA editing domain M483_2639 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M483_2640 PF18389 TrmO C-terminal domain M483_2640 PF01980 tRNA-methyltransferase O M483_2641 PF16358 RcsF lipoprotein M483_2642 PF03180 NLPA lipoprotein M483_2643 PF00528 Binding-protein-dependent transport system inner membrane component M483_2644 PF00005 ABC transporter M483_2644 PF09383 NIL domain M483_265 PF17482 Phage tail sheath C-terminal domain M483_265 PF04984 Phage tail sheath protein subtilisin-like domain M483_2651 PF00248 Aldo/keto reductase family M483_2653 PF03372 Endonuclease/Exonuclease/phosphatase family M483_2654 PF01464 Transglycosylase SLT domain M483_2654 PF01476 LysM domain M483_2655 PF00753 Metallo-beta-lactamase superfamily M483_2655 PF16123 Hydroxyacylglutathione hydrolase C-terminus M483_2656 PF08241 Methyltransferase domain M483_2657 PF00075 RNase H M483_2658 PF00929 Exonuclease M483_2660 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M483_2662 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M483_2663 PF00528 Binding-protein-dependent transport system inner membrane component M483_2664 PF00571 CBS domain M483_2664 PF00005 ABC transporter M483_2665 PF00268 Ribonucleotide reductase, small chain M483_2666 PF08343 Ribonucleotide reductase N-terminal M483_2666 PF00317 Ribonucleotide reductase, all-alpha domain M483_2666 PF02867 Ribonucleotide reductase, barrel domain M483_2667 PF07972 NrdI Flavodoxin like M483_2669 PF06392 Acid shock protein repeat M483_2670 PF09400 Protein of unknown function (DUF2002) M483_2671 PF06711 Protein of unknown function (DUF1198) M483_2673 PF00313 'Cold-shock' DNA-binding domain M483_2674 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_2675 PF00528 Binding-protein-dependent transport system inner membrane component M483_2676 PF12911 N-terminal TM domain of oligopeptide transport permease C M483_2676 PF00528 Binding-protein-dependent transport system inner membrane component M483_2677 PF00005 ABC transporter M483_2678 PF00005 ABC transporter M483_2680 PF00547 Urease, gamma subunit M483_2681 PF00699 Urease beta subunit M483_2682 PF01979 Amidohydrolase family M483_2682 PF00449 Urease alpha-subunit, N-terminal domain M483_2683 PF05194 UreE urease accessory protein, C-terminal domain M483_2683 PF02814 UreE urease accessory protein, N-terminal domain M483_2684 PF01730 UreF M483_2685 PF02492 CobW/HypB/UreG, nucleotide-binding domain M483_2686 PF01774 UreD urease accessory protein M483_2687 PF03253 Urea transporter M483_2688 PF03824 High-affinity nickel-transport protein M483_2689 PF06411 HdeA/HdeB family M483_269 PF01261 Xylose isomerase-like TIM barrel M483_2690 PF07885 Ion channel M483_2690 PF02254 TrkA-N domain M483_2691 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M483_2692 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M483_2693 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M483_2694 PF02378 Phosphotransferase system, EIIC M483_2695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M483_2696 PF07883 Cupin domain M483_2696 PF12833 Helix-turn-helix domain M483_2697 PF04794 YdjC-like protein M483_27 PF00478 IMP dehydrogenase / GMP reductase domain M483_27 PF00571 CBS domain M483_270 PF00455 DeoR C terminal sensor domain M483_270 PF08220 DeoR-like helix-turn-helix domain M483_2700 PF17206 SeqA protein N-terminal domain M483_2700 PF03925 SeqA protein C-terminal domain M483_2701 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M483_2701 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M483_2701 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M483_2701 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M483_2705 PF00486 Transcriptional regulatory protein, C terminal M483_2705 PF00072 Response regulator receiver domain M483_2706 PF00512 His Kinase A (phospho-acceptor) domain M483_2706 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_2706 PF13493 Domain of unknown function (DUF4118) M483_2706 PF13492 GAF domain M483_2706 PF02702 Osmosensitive K+ channel His kinase sensor domain M483_2707 PF13492 GAF domain M483_2707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_2707 PF00512 His Kinase A (phospho-acceptor) domain M483_2707 PF13493 Domain of unknown function (DUF4118) M483_2707 PF02702 Osmosensitive K+ channel His kinase sensor domain M483_2708 PF02669 K+-transporting ATPase, c chain M483_271 PF00596 Class II Aldolase and Adducin N-terminal domain M483_2710 PF03814 Potassium-transporting ATPase A subunit M483_2711 PF10725 Protein of unknown function (DUF2517) M483_2712 PF08349 Protein of unknown function (DUF1722) M483_2713 PF00875 DNA photolyase M483_2713 PF03441 FAD binding domain of DNA photolyase M483_2714 PF02112 cAMP phosphodiesterases class-II M483_2715 PF01784 NIF3 (NGG1p interacting factor 3) M483_2717 PF02682 Carboxyltransferase domain, subdomain C and D M483_2718 PF02626 Carboxyltransferase domain, subdomain A and B M483_2719 PF03746 LamB/YcsF family M483_272 PF17042 Nucleotide-binding C-terminal domain M483_272 PF07005 Sugar-binding N-terminal domain M483_2722 PF01470 Pyroglutamyl peptidase M483_2723 PF03167 Uracil DNA glycosylase superfamily M483_2724 PF01228 Glycine radical M483_2727 PF12796 Ankyrin repeats (3 copies) M483_2729 PF00270 DEAD/DEAH box helicase M483_2729 PF00271 Helicase conserved C-terminal domain M483_273 PF06530 Phage antitermination protein Q M483_2730 PF05175 Methyltransferase small domain M483_2731 PF02910 Fumarate reductase flavoprotein C-term M483_2731 PF00890 FAD binding domain M483_2732 PF04542 Sigma-70 region 2 M483_2732 PF08281 Sigma-70, region 4 M483_2733 PF03873 Anti sigma-E protein RseA, C-terminal domain M483_2733 PF03872 Anti sigma-E protein RseA, N-terminal domain M483_2734 PF03888 MucB/RseB N-terminal domain M483_2734 PF17188 MucB/RseB C-terminal domain M483_2737 PF00009 Elongation factor Tu GTP binding domain M483_2737 PF03144 Elongation factor Tu domain 2 M483_2737 PF00679 Elongation factor G C-terminus M483_2737 PF06421 GTP-binding protein LepA C-terminus M483_2738 PF10502 Signal peptidase, peptidase S26 M483_2739 PF00035 Double-stranded RNA binding motif M483_2739 PF14622 Ribonuclease-III-like M483_274 PF00717 Peptidase S24-like M483_274 PF01381 Helix-turn-helix M483_2740 PF07650 KH domain M483_2740 PF01926 50S ribosome-binding GTPase M483_2741 PF11967 Recombination protein O N terminal M483_2741 PF02565 Recombination protein O C terminal M483_2742 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M483_2743 PF01648 4'-phosphopantetheinyl transferase superfamily M483_2744 PF01797 Transposase IS200 like M483_2745 PF00109 Beta-ketoacyl synthase, N-terminal domain M483_2745 PF02801 Beta-ketoacyl synthase, C-terminal domain M483_2746 PF01695 IstB-like ATP binding protein M483_2747 PF00665 Integrase core domain M483_2747 PF02796 Helix-turn-helix domain of resolvase M483_2748 PF00109 Beta-ketoacyl synthase, N-terminal domain M483_2748 PF02801 Beta-ketoacyl synthase, C-terminal domain M483_275 PF06183 DinI-like family M483_2750 PF07977 FabA-like domain M483_2751 PF13654 AAA domain M483_2751 PF05362 Lon protease (S16) C-terminal proteolytic domain M483_2752 PF06303 MatP N-terminal domain M483_2752 PF17414 MatP C-terminal ribbon-helix-helix domain M483_2753 PF01797 Transposase IS200 like M483_2754 PF00691 OmpA family M483_2754 PF01389 OmpA-like transmembrane domain M483_2755 PF03846 Cell division inhibitor SulA M483_2756 PF04994 TfoX C-terminal domain M483_2756 PF04993 TfoX N-terminal domain M483_2757 PF12805 FUSC-like inner membrane protein yccS M483_2758 PF03733 Inner membrane component domain M483_2759 PF13361 UvrD-like helicase C-terminal domain M483_2759 PF00580 UvrD/REP helicase N-terminal domain M483_2759 PF12462 DNA helicase IV / RNA helicase N terminal M483_2760 PF02142 MGS-like domain M483_2761 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M483_2762 PF13380 CoA binding domain M483_2763 PF08755 Hemimethylated DNA-binding protein YccV like M483_2764 PF10672 S-adenosylmethionine-dependent methyltransferase M483_2764 PF17785 PUA-like domain M483_2765 PF00708 Acylphosphatase M483_2766 PF04358 DsrC like protein M483_2768 PF13610 DDE domain M483_277 PF01278 Omptin family M483_2772 PF08031 Berberine and berberine like M483_2772 PF01565 FAD binding domain M483_2775 PF07977 FabA-like domain M483_2776 PF02801 Beta-ketoacyl synthase, C-terminal domain M483_2776 PF00109 Beta-ketoacyl synthase, N-terminal domain M483_2778 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M483_2778 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M483_278 PF00672 HAMP domain M483_278 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_278 PF02743 Cache domain M483_2780 PF00378 Enoyl-CoA hydratase/isomerase M483_2783 PF00550 Phosphopantetheine attachment site M483_2784 PF00698 Acyl transferase domain M483_279 PF12706 Beta-lactamase superfamily domain M483_2792 PF07724 AAA domain (Cdc48 subfamily) M483_2792 PF10431 C-terminal, D2-small domain, of ClpB protein M483_2792 PF00004 ATPase family associated with various cellular activities (AAA) M483_2792 PF17871 AAA lid domain M483_28 PF02601 Exonuclease VII, large subunit M483_28 PF13742 OB-fold nucleic acid binding domain M483_281 PF00144 Beta-lactamase M483_2811 PF12848 ABC transporter M483_2811 PF00005 ABC transporter M483_2813 PF00899 ThiF family M483_2814 PF00994 Probable molybdopterin binding domain M483_2814 PF03454 MoeA C-terminal region (domain IV) M483_2814 PF03453 MoeA N-terminal region (domain I and II) M483_2816 PF00005 ABC transporter M483_2817 PF13533 Biotin-lipoyl like M483_2820 PF00756 Putative esterase M483_2821 PF08240 Alcohol dehydrogenase GroES-like domain M483_2821 PF00107 Zinc-binding dehydrogenase M483_2822 PF03466 LysR substrate binding domain M483_2822 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_2823 PF06779 Uncharacterised MFS-type transporter YbfB M483_2824 PF01227 GTP cyclohydrolase I M483_2825 PF04235 Protein of unknown function (DUF418) M483_2826 PF13407 Periplasmic binding protein domain M483_2827 PF00005 ABC transporter M483_2828 PF02653 Branched-chain amino acid transport system / permease component M483_2829 PF01695 IstB-like ATP binding protein M483_2830 PF00665 Integrase core domain M483_2830 PF02796 Helix-turn-helix domain of resolvase M483_2831 PF02653 Branched-chain amino acid transport system / permease component M483_2832 PF02698 DUF218 domain M483_2833 PF03949 Malic enzyme, NAD binding domain M483_2833 PF00390 Malic enzyme, N-terminal domain M483_2834 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M483_2834 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M483_2835 PF04172 LrgB-like family M483_2836 PF03788 LrgA family M483_2837 PF07690 Major Facilitator Superfamily M483_284 PF00267 Gram-negative porin M483_2841 PF01797 Transposase IS200 like M483_2842 PF01588 Putative tRNA binding domain M483_2842 PF09334 tRNA synthetases class I (M) M483_2843 PF10609 NUBPL iron-transfer P-loop NTPase M483_2844 PF00485 Phosphoribulokinase / Uridine kinase family M483_2845 PF00692 dUTPase M483_2846 PF05170 AsmA family M483_2847 PF03471 Transporter associated domain M483_2847 PF03741 Integral membrane protein TerC family M483_2847 PF00571 CBS domain M483_2848 PF11575 FhuF 2Fe-2S C-terminal domain M483_2848 PF06276 Ferric iron reductase FhuF-like transporter M483_2849 PF00282 Pyridoxal-dependent decarboxylase conserved domain M483_2850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M483_2852 PF04183 IucA / IucC family M483_2852 PF06276 Ferric iron reductase FhuF-like transporter M483_2853 PF00005 ABC transporter M483_2854 PF01032 FecCD transport family M483_2855 PF01032 FecCD transport family M483_2856 PF01497 Periplasmic binding protein M483_2857 PF07715 TonB-dependent Receptor Plug Domain M483_2857 PF00593 TonB dependent receptor M483_2857 PF07660 Secretin and TonB N terminus short domain M483_2858 PF06276 Ferric iron reductase FhuF-like transporter M483_2858 PF04183 IucA / IucC family M483_2859 PF00483 Nucleotidyl transferase M483_286 PF07690 Major Facilitator Superfamily M483_2860 PF00483 Nucleotidyl transferase M483_2861 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M483_2861 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M483_2862 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M483_2862 PF01502 Phosphoribosyl-AMP cyclohydrolase M483_2863 PF00977 Histidine biosynthesis protein M483_2864 PF00977 Histidine biosynthesis protein M483_2865 PF00117 Glutamine amidotransferase class-I M483_2866 PF00475 Imidazoleglycerol-phosphate dehydratase M483_2867 PF00155 Aminotransferase class I and II M483_2868 PF00815 Histidinol dehydrogenase M483_2869 PF01634 ATP phosphoribosyltransferase M483_2869 PF08029 HisG, C-terminal domain M483_287 PF07690 Major Facilitator Superfamily M483_2870 PF01370 NAD dependent epimerase/dehydratase family M483_2872 PF02653 Branched-chain amino acid transport system / permease component M483_2873 PF00005 ABC transporter M483_2874 PF00005 ABC transporter M483_2875 PF00465 Iron-containing alcohol dehydrogenase M483_2877 PF13520 Amino acid permease M483_2878 PF08411 Exonuclease C-terminal M483_2878 PF00929 Exonuclease M483_288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_288 PF16359 RcsD-ABL domain M483_288 PF01627 Hpt domain M483_2880 PF04363 Protein of unknown function (DUF496) M483_2881 PF11924 Inverse autotransporter, beta-domain M483_2881 PF02369 Bacterial Ig-like domain (group 1) M483_2881 PF09134 Invasin, domain 3 M483_2882 PF00872 Transposase, Mutator family M483_2883 PF07690 Major Facilitator Superfamily M483_2884 PF04134 Protein of unknown function, DUF393 M483_2886 PF01557 Fumarylacetoacetate (FAA) hydrolase family M483_2887 PF13378 Enolase C-terminal domain-like M483_2887 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M483_2889 PF01070 FMN-dependent dehydrogenase M483_289 PF16359 RcsD-ABL domain M483_289 PF01627 Hpt domain M483_289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_2890 PF00764 Arginosuccinate synthase M483_2891 PF01554 MatE M483_2893 PF01522 Polysaccharide deacetylase M483_2895 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M483_2897 PF00196 Bacterial regulatory proteins, luxR family M483_2897 PF00072 Response regulator receiver domain M483_2898 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M483_29 PF07191 zinc-ribbons M483_290 PF00196 Bacterial regulatory proteins, luxR family M483_290 PF00072 Response regulator receiver domain M483_2900 PF03480 Bacterial extracellular solute-binding protein, family 7 M483_2901 PF01648 4'-phosphopantetheinyl transferase superfamily M483_2901 PF17837 4'-phosphopantetheinyl transferase N-terminal domain M483_2904 PF16874 Glycosyl hydrolase family 36 C-terminal domain M483_2904 PF16875 Glycosyl hydrolase family 36 N-terminal domain M483_2905 PF01306 LacY proton/sugar symporter M483_2906 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M483_2906 PF00356 Bacterial regulatory proteins, lacI family M483_2908 PF06167 Glucose-regulated metallo-peptidase M90 M483_291 PF09456 RcsC Alpha-Beta-Loop (ABL) M483_291 PF00072 Response regulator receiver domain M483_291 PF00512 His Kinase A (phospho-acceptor) domain M483_291 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_2911 PF01797 Transposase IS200 like M483_2912 PF00005 ABC transporter M483_2912 PF00664 ABC transporter transmembrane region M483_2914 PF12833 Helix-turn-helix domain M483_2916 PF10964 Protein of unknown function (DUF2766) M483_2917 PF13996 YobH-like protein M483_2918 PF13974 YebO-like protein M483_292 PF03989 DNA gyrase C-terminal domain, beta-propeller M483_292 PF00521 DNA gyrase/topoisomerase IV, subunit A M483_2921 PF00324 Amino acid permease M483_2922 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP M483_2924 PF00313 'Cold-shock' DNA-binding domain M483_2926 PF13847 Methyltransferase domain M483_2928 PF13426 PAS domain M483_2928 PF00990 Diguanylate cyclase, GGDEF domain M483_2928 PF08447 PAS fold M483_2928 PF05231 MASE1 M483_2928 PF00563 EAL domain M483_2928 PF08448 PAS fold M483_2929 PF07715 TonB-dependent Receptor Plug Domain M483_2929 PF00593 TonB dependent receptor M483_2930 PF02659 Putative manganese efflux pump M483_2931 PF06173 Protein of unknown function (DUF986) M483_2932 PF03613 PTS system mannose/fructose/sorbose family IID component M483_2933 PF03609 PTS system sorbose-specific iic component M483_2934 PF03610 PTS system fructose IIA component M483_2934 PF03830 PTS system sorbose subfamily IIB component M483_2935 PF03741 Integral membrane protein TerC family M483_2935 PF03471 Transporter associated domain M483_2936 PF01047 MarR family M483_2937 PF01557 Fumarylacetoacetate (FAA) hydrolase family M483_2938 PF01557 Fumarylacetoacetate (FAA) hydrolase family M483_2939 PF00171 Aldehyde dehydrogenase family M483_294 PF00317 Ribonucleotide reductase, all-alpha domain M483_294 PF02867 Ribonucleotide reductase, barrel domain M483_294 PF03477 ATP cone domain M483_2940 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M483_2941 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase M483_2942 PF01557 Fumarylacetoacetate (FAA) hydrolase family M483_2943 PF03328 HpcH/HpaI aldolase/citrate lyase family M483_2944 PF07690 Major Facilitator Superfamily M483_2945 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal M483_2945 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal M483_2946 PF01613 Flavin reductase like domain M483_2947 PF03315 Serine dehydratase beta chain M483_2947 PF03313 Serine dehydratase alpha chain M483_2948 PF00293 NUDIX domain M483_2949 PF04715 Anthranilate synthase component I, N terminal region M483_2949 PF00425 chorismate binding enzyme M483_295 PF00268 Ribonucleotide reductase, small chain M483_2950 PF03701 Uncharacterised protein family (UPF0181) M483_2951 PF02222 ATP-grasp domain M483_2952 PF00271 Helicase conserved C-terminal domain M483_2952 PF03880 DbpA RNA binding domain M483_2952 PF00270 DEAD/DEAH box helicase M483_2953 PF07130 YebG protein M483_2955 PF13995 YebF-like protein M483_2956 PF00326 Prolyl oligopeptidase family M483_2956 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M483_2957 PF00561 alpha/beta hydrolase fold M483_2958 PF06440 DNA polymerase III, theta subunit M483_2959 PF00210 Ferritin-like domain M483_296 PF00111 2Fe-2S iron-sulfur cluster binding domain M483_2960 PF04234 CopC domain M483_2962 PF10709 Protein of unknown function (DUF2511) M483_2965 PF01312 FlhB HrpN YscU SpaS Family M483_2966 PF00771 FHIPEP family M483_2967 PF06366 Flagellar protein FlhE M483_2968 PF09134 Invasin, domain 3 M483_2968 PF11924 Inverse autotransporter, beta-domain M483_2968 PF02369 Bacterial Ig-like domain (group 1) M483_2968 PF07979 Intimin C-type lectin domain M483_2969 PF01797 Transposase IS200 like M483_297 PF03974 Ecotin M483_2970 PF11924 Inverse autotransporter, beta-domain M483_2970 PF02369 Bacterial Ig-like domain (group 1) M483_2970 PF07979 Intimin C-type lectin domain M483_2970 PF09134 Invasin, domain 3 M483_2971 PF05130 FlgN protein M483_2972 PF04316 Anti-sigma-28 factor, FlgM M483_2973 PF17656 FlgA N-terminal domain M483_2973 PF13144 Chaperone for flagella basal body P-ring formation M483_2974 PF00460 Flagella basal body rod protein M483_2975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2975 PF00460 Flagella basal body rod protein M483_2976 PF13860 FlgD Ig-like domain M483_2976 PF03963 Flagellar hook capping protein - N-terminal region M483_2976 PF13861 FlgD Tudor-like domain M483_2977 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2977 PF00460 Flagella basal body rod protein M483_2977 PF07559 Flagellar basal body protein FlaE M483_2978 PF00460 Flagella basal body rod protein M483_2978 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2979 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2979 PF00460 Flagella basal body rod protein M483_298 PF00994 Probable molybdopterin binding domain M483_2980 PF02107 Flagellar L-ring protein M483_2981 PF02119 Flagellar P-ring protein M483_2982 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M483_2982 PF10135 Rod binding protein M483_2983 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M483_2983 PF00460 Flagella basal body rod protein M483_2984 PF00669 Bacterial flagellin N-terminal helical region M483_2985 PF04198 Putative sugar-binding domain M483_2986 PF00596 Class II Aldolase and Adducin N-terminal domain M483_2987 PF02653 Branched-chain amino acid transport system / permease component M483_2988 PF13407 Periplasmic binding protein domain M483_2989 PF00005 ABC transporter M483_299 PF03222 Tryptophan/tyrosine permease family M483_2990 PF02653 Branched-chain amino acid transport system / permease component M483_2991 PF00294 pfkB family carbohydrate kinase M483_2994 PF01311 Bacterial export proteins, family 1 M483_2995 PF01313 Bacterial export proteins, family 3 M483_2996 PF00813 FliP family M483_2997 PF04347 Flagellar biosynthesis protein, FliO M483_2998 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M483_2998 PF16973 Flagellar motor switch protein FliN N-terminal M483_2999 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M483_2999 PF02154 Flagellar motor switch protein FliM M483_3 PF13533 Biotin-lipoyl like M483_300 PF07437 YfaZ precursor M483_3000 PF03748 Flagellar basal body-associated protein FliL M483_3001 PF02120 Flagellar hook-length control protein FliK M483_3002 PF02050 Flagellar FliJ protein M483_3003 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M483_3003 PF18269 T3SS EscN ATPase C-terminal domain M483_3004 PF02108 Flagellar assembly protein FliH M483_3005 PF14842 FliG N-terminal domain M483_3005 PF01706 FliG C-terminal domain M483_3005 PF14841 FliG middle domain M483_3006 PF01514 Secretory protein of YscJ/FliF family M483_3006 PF08345 Flagellar M-ring protein C-terminal M483_3007 PF02049 Flagellar hook-basal body complex protein FliE M483_301 PF06628 Catalase-related immune-responsive M483_301 PF00199 Catalase M483_3010 PF00730 HhH-GPD superfamily base excision DNA repair protein M483_3011 PF01966 HD domain M483_3012 PF12833 Helix-turn-helix domain M483_3013 PF05400 Flagellar protein FliT M483_3014 PF02561 Flagellar protein FliS M483_3015 PF02465 Flagellar hook-associated protein 2 N-terminus M483_3015 PF07196 Flagellin hook IN motif M483_3015 PF07195 Flagellar hook-associated protein 2 C-terminus M483_3016 PF00700 Bacterial flagellin C-terminal helical region M483_3016 PF08884 Flagellin D3 domain M483_3016 PF00669 Bacterial flagellin N-terminal helical region M483_3017 PF04545 Sigma-70, region 4 M483_3017 PF04539 Sigma-70 region 3 M483_3017 PF04542 Sigma-70 region 2 M483_3018 PF02899 Phage integrase, N-terminal SAM-like domain M483_3019 PF00291 Pyridoxal-phosphate dependent enzyme M483_302 PF13307 Helicase C-terminal domain M483_302 PF06733 DEAD_2 M483_3026 PF01619 Proline dehydrogenase M483_3026 PF14850 DNA-binding domain of Proline dehydrogenase M483_3026 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M483_3026 PF00171 Aldehyde dehydrogenase family M483_3028 PF00474 Sodium:solute symporter family M483_3029 PF03239 Iron permease FTR1 family M483_303 PF00267 Gram-negative porin M483_3030 PF09375 Imelysin M483_3030 PF13473 Cupredoxin-like domain M483_3031 PF04261 Dyp-type peroxidase family M483_3032 PF03358 NADPH-dependent FMN reductase M483_3033 PF01344 Kelch motif M483_3034 PF00324 Amino acid permease M483_3036 PF13505 Outer membrane protein beta-barrel domain M483_3038 PF06942 GlpM protein M483_3039 PF10769 Protein of unknown function (DUF2594) M483_304 PF00892 EamA-like transporter family M483_3040 PF00072 Response regulator receiver domain M483_3040 PF00196 Bacterial regulatory proteins, luxR family M483_3041 PF08459 UvrC Helix-hairpin-helix N-terminal M483_3041 PF01541 GIY-YIG catalytic domain M483_3041 PF02151 UvrB/uvrC motif M483_3042 PF01066 CDP-alcohol phosphatidyltransferase M483_3051 PF05638 Type VI secretion system effector, Hcp M483_306 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M483_306 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M483_306 PF01276 Orn/Lys/Arg decarboxylase, major domain M483_3063 PF00872 Transposase, Mutator family M483_3064 PF00872 Transposase, Mutator family M483_307 PF00872 Transposase, Mutator family M483_3071 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M483_3071 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_3072 PF01547 Bacterial extracellular solute-binding protein M483_3073 PF00528 Binding-protein-dependent transport system inner membrane component M483_3074 PF00528 Binding-protein-dependent transport system inner membrane component M483_3075 PF08402 TOBE domain M483_3075 PF00005 ABC transporter M483_3078 PF02796 Helix-turn-helix domain of resolvase M483_3078 PF00665 Integrase core domain M483_3079 PF01695 IstB-like ATP binding protein M483_308 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M483_308 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M483_308 PF01276 Orn/Lys/Arg decarboxylase, major domain M483_3087 PF07715 TonB-dependent Receptor Plug Domain M483_3087 PF00593 TonB dependent receptor M483_3088 PF13193 AMP-binding enzyme C-terminal domain M483_3088 PF00501 AMP-binding enzyme M483_3089 PF00975 Thioesterase domain M483_309 PF13520 Amino acid permease M483_3091 PF00668 Condensation domain M483_3091 PF16197 Ketoacyl-synthetase C-terminal extension M483_3091 PF00550 Phosphopantetheine attachment site M483_3091 PF00109 Beta-ketoacyl synthase, N-terminal domain M483_3091 PF00698 Acyl transferase domain M483_3091 PF02801 Beta-ketoacyl synthase, C-terminal domain M483_3092 PF00501 AMP-binding enzyme M483_3092 PF00668 Condensation domain M483_3092 PF08242 Methyltransferase domain M483_3092 PF00550 Phosphopantetheine attachment site M483_3094 PF08021 Siderophore-interacting FAD-binding domain M483_3094 PF00005 ABC transporter M483_3094 PF04954 Siderophore-interacting protein M483_3094 PF00664 ABC transporter transmembrane region M483_3095 PF00664 ABC transporter transmembrane region M483_3095 PF00005 ABC transporter M483_3096 PF07690 Major Facilitator Superfamily M483_3097 PF00425 chorismate binding enzyme M483_3098 PF00589 Phage integrase family M483_3098 PF13356 Arm DNA-binding domain M483_31 PF01926 50S ribosome-binding GTPase M483_31 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M483_310 PF00528 Binding-protein-dependent transport system inner membrane component M483_3101 PF00872 Transposase, Mutator family M483_3102 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_3102 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_3104 PF13953 PapC C-terminal domain M483_3104 PF13954 PapC N-terminal domain M483_3104 PF00577 Outer membrane usher protein M483_3105 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_3105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_3107 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_3107 PF00072 Response regulator receiver domain M483_3107 PF00989 PAS fold M483_3107 PF01627 Hpt domain M483_3107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_3107 PF00512 His Kinase A (phospho-acceptor) domain M483_3108 PF00072 Response regulator receiver domain M483_3108 PF00196 Bacterial regulatory proteins, luxR family M483_311 PF00005 ABC transporter M483_3110 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain M483_3110 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain M483_3111 PF01575 MaoC like domain M483_3112 PF03328 HpcH/HpaI aldolase/citrate lyase family M483_3113 PF03466 LysR substrate binding domain M483_3113 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3117 PF04909 Amidohydrolase M483_3119 PF02508 Rnf-Nqr subunit, membrane protein M483_312 PF00528 Binding-protein-dependent transport system inner membrane component M483_3120 PF00155 Aminotransferase class I and II M483_3121 PF00324 Amino acid permease M483_3122 PF00455 DeoR C terminal sensor domain M483_3122 PF08220 DeoR-like helix-turn-helix domain M483_3123 PF04960 Glutaminase M483_3126 PF03239 Iron permease FTR1 family M483_3127 PF10634 Fe2+ transport protein M483_3129 PF12704 MacB-like periplasmic core domain M483_3129 PF00005 ABC transporter M483_3129 PF02687 FtsX-like permease family M483_313 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M483_3131 PF12704 MacB-like periplasmic core domain M483_3131 PF00005 ABC transporter M483_3131 PF02687 FtsX-like permease family M483_3132 PF00578 AhpC/TSA family M483_3134 PF03848 Tellurite resistance protein TehB M483_3134 PF09313 Domain of unknown function (DUF1971) M483_3135 PF00557 Metallopeptidase family M24 M483_3137 PF01522 Polysaccharide deacetylase M483_3137 PF14883 Hypothetical glycosyl hydrolase family 13 M483_3138 PF00535 Glycosyl transferase family 2 M483_3139 PF13994 PgaD-like protein M483_314 PF00581 Rhodanese-like domain M483_3142 PF02562 PhoH-like protein M483_3143 PF01699 Sodium/calcium exchanger protein M483_3145 PF07730 Histidine kinase M483_3145 PF00672 HAMP domain M483_3145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M483_3145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_3146 PF00155 Aminotransferase class I and II M483_3146 PF00392 Bacterial regulatory proteins, gntR family M483_3149 PF00202 Aminotransferase class-III M483_3150 PF04958 Arginine N-succinyltransferase beta subunit M483_3151 PF00171 Aldehyde dehydrogenase family M483_3152 PF04996 Succinylarginine dihydrolase M483_3153 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M483_3154 PF00267 Gram-negative porin M483_3155 PF00872 Transposase, Mutator family M483_3157 PF01695 IstB-like ATP binding protein M483_3158 PF00665 Integrase core domain M483_3158 PF02796 Helix-turn-helix domain of resolvase M483_3159 PF02796 Helix-turn-helix domain of resolvase M483_3159 PF00665 Integrase core domain M483_3160 PF01979 Amidohydrolase family M483_3161 PF00392 Bacterial regulatory proteins, gntR family M483_3161 PF07702 UTRA domain M483_3162 PF01979 Amidohydrolase family M483_3163 PF05962 HutD M483_3165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M483_3165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M483_3166 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M483_3166 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M483_3167 PF01370 NAD dependent epimerase/dehydratase family M483_317 PF00005 ABC transporter M483_3176 PF00872 Transposase, Mutator family M483_318 PF00005 ABC transporter M483_3181 PF08242 Methyltransferase domain M483_319 PF02653 Branched-chain amino acid transport system / permease component M483_3190 PF00512 His Kinase A (phospho-acceptor) domain M483_3190 PF00672 HAMP domain M483_3190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_3191 PF00486 Transcriptional regulatory protein, C terminal M483_3191 PF00072 Response regulator receiver domain M483_3192 PF01695 IstB-like ATP binding protein M483_3193 PF00665 Integrase core domain M483_3193 PF02796 Helix-turn-helix domain of resolvase M483_3194 PF00486 Transcriptional regulatory protein, C terminal M483_3194 PF00072 Response regulator receiver domain M483_3195 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M483_32 PF13360 PQQ-like domain M483_320 PF02653 Branched-chain amino acid transport system / permease component M483_3204 PF01926 50S ribosome-binding GTPase M483_3204 PF06071 Protein of unknown function (DUF933) M483_3205 PF01195 Peptidyl-tRNA hydrolase M483_3206 PF10762 Protein of unknown function (DUF2583) M483_3207 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M483_3207 PF14572 Phosphoribosyl synthetase-associated domain M483_3208 PF08544 GHMP kinases C terminal M483_3208 PF00288 GHMP kinases N terminal domain M483_3209 PF03550 Outer membrane lipoprotein LolB M483_321 PF13188 PAS domain M483_321 PF02954 Bacterial regulatory protein, Fis family M483_321 PF00158 Sigma-54 interaction domain M483_3210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M483_3210 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M483_3210 PF01488 Shikimate / quinate 5-dehydrogenase M483_3211 PF00472 RF-1 domain M483_3211 PF03462 PCRF domain M483_3212 PF17827 PrmC N-terminal domain M483_3212 PF13847 Methyltransferase domain M483_3213 PF04247 Invasion gene expression up-regulator, SirB M483_3214 PF13369 Transglutaminase-like superfamily M483_3215 PF00793 DAHP synthetase I family M483_3216 PF01740 STAS domain M483_3216 PF00916 Sulfate permease family M483_3218 PF03009 Glycerophosphoryl diester phosphodiesterase family M483_322 PF07308 Protein of unknown function (DUF1456) M483_3220 PF00528 Binding-protein-dependent transport system inner membrane component M483_3221 PF00528 Binding-protein-dependent transport system inner membrane component M483_3222 PF08402 TOBE domain M483_3222 PF00005 ABC transporter M483_3223 PF01797 Transposase IS200 like M483_3224 PF00005 ABC transporter M483_3224 PF08402 TOBE domain M483_3225 PF03009 Glycerophosphoryl diester phosphodiesterase family M483_3226 PF01325 Iron dependent repressor, N-terminal DNA binding domain M483_3226 PF00480 ROK family M483_3228 PF02811 PHP domain M483_3229 PF02613 Nitrate reductase delta subunit M483_323 PF00528 Binding-protein-dependent transport system inner membrane component M483_3230 PF07273 Protein of unknown function (DUF1439) M483_3231 PF07690 Major Facilitator Superfamily M483_3232 PF13302 Acetyltransferase (GNAT) domain M483_3233 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_3234 PF03023 Lipid II flippase MurJ M483_3235 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M483_3235 PF17287 POTRA domain M483_3235 PF08479 POTRA domain, ShlB-type M483_3236 PF13332 Hemagglutinin repeat M483_3236 PF05860 haemagglutination activity domain M483_3237 PF03485 Arginyl tRNA synthetase N terminal domain M483_3237 PF05746 DALR anticodon binding domain M483_3237 PF00750 tRNA synthetases class I (R) M483_3238 PF06185 YecM protein M483_3239 PF03932 CutC family M483_324 PF00528 Binding-protein-dependent transport system inner membrane component M483_3240 PF08003 Protein of unknown function (DUF1698) M483_3241 PF13649 Methyltransferase domain M483_3242 PF01124 MAPEG family M483_3243 PF01904 Protein of unknown function DUF72 M483_3244 PF00152 tRNA synthetases class II (D, K and N) M483_3244 PF02938 GAD domain M483_3244 PF01336 OB-fold nucleic acid binding domain M483_3245 PF00293 NUDIX domain M483_3246 PF01709 Transcriptional regulator M483_3247 PF02075 Crossover junction endodeoxyribonuclease RuvC M483_3248 PF07499 RuvA, C-terminal domain M483_3248 PF01330 RuvA N terminal domain M483_3249 PF05491 RuvB C-terminal winged helix domain M483_3249 PF17864 RuvB AAA lid domain M483_3249 PF05496 Holliday junction DNA helicase RuvB P-loop domain M483_3250 PF00950 ABC 3 transport family M483_3251 PF00005 ABC transporter M483_3252 PF01297 Zinc-uptake complex component A periplasmic M483_3253 PF01551 Peptidase family M23 M483_3253 PF08525 Opacity-associated protein A N-terminal motif M483_3253 PF01476 LysM domain M483_3254 PF03279 Bacterial lipid A biosynthesis acyltransferase M483_3255 PF00224 Pyruvate kinase, barrel domain M483_3255 PF02887 Pyruvate kinase, alpha/beta domain M483_3256 PF01418 Helix-turn-helix domain, rpiR family M483_3256 PF01380 SIS domain M483_3257 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M483_3257 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M483_3259 PF01081 KDPG and KHG aldolase M483_326 PF00005 ABC transporter M483_3260 PF00893 Small Multidrug Resistance protein M483_3261 PF00893 Small Multidrug Resistance protein M483_3262 PF01042 Endoribonuclease L-PSP M483_3263 PF13307 Helicase C-terminal domain M483_3263 PF04851 Type III restriction enzyme, res subunit M483_3264 PF00814 Glycoprotease family M483_3265 PF03843 Outer membrane lipoprotein Slp family M483_3266 PF13193 AMP-binding enzyme C-terminal domain M483_3266 PF00501 AMP-binding enzyme M483_3267 PF01612 3'-5' exonuclease M483_3267 PF00570 HRDC domain M483_3268 PF03776 Septum formation topological specificity factor MinE M483_3269 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M483_327 PF04226 Transglycosylase associated protein M483_3270 PF05209 Septum formation inhibitor MinC, N-terminal domain M483_3270 PF03775 Septum formation inhibitor MinC, C-terminal domain M483_3271 PF05166 YcgL domain M483_3272 PF13406 Transglycosylase SLT domain M483_3273 PF01557 Fumarylacetoacetate (FAA) hydrolase family M483_3274 PF03692 Putative zinc- or iron-chelating domain M483_3275 PF12167 Arm DNA-binding domain M483_3275 PF00589 Phage integrase family M483_3276 PF00665 Integrase core domain M483_3276 PF02796 Helix-turn-helix domain of resolvase M483_3277 PF01695 IstB-like ATP binding protein M483_3280 PF05772 NinB protein M483_3282 PF06530 Phage antitermination protein Q M483_329 PF01844 HNH endonuclease M483_33 PF09976 Tetratricopeptide repeat-like domain M483_330 PF01928 CYTH domain M483_3309 PF01797 Transposase IS200 like M483_331 PF01565 FAD binding domain M483_331 PF09330 D-lactate dehydrogenase, membrane binding M483_332 PF00768 D-alanyl-D-alanine carboxypeptidase M483_3325 PF02413 Caudovirales tail fibre assembly protein, lambda gpK M483_3327 PF00266 Aminotransferase class-V M483_3330 PF02600 Disulfide bond formation protein DsbB M483_3331 PF06450 Bacterial Na+/H+ antiporter B (NhaB) M483_3332 PF00392 Bacterial regulatory proteins, gntR family M483_3332 PF07840 FadR C-terminal domain M483_3333 PF04293 SpoVR like protein M483_3334 PF01266 FAD dependent oxidoreductase M483_3335 PF07690 Major Facilitator Superfamily M483_3336 PF02678 Pirin M483_3336 PF05726 Pirin C-terminal cupin domain M483_3337 PF03466 LysR substrate binding domain M483_3337 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3339 PF04285 Protein of unknown function (DUF444) M483_334 PF01207 Dihydrouridine synthase (Dus) M483_3340 PF06798 PrkA serine protein kinase C-terminal domain M483_3340 PF08298 PrkA AAA domain M483_3341 PF06629 MltA-interacting protein MipA M483_3342 PF01263 Aldose 1-epimerase M483_3343 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M483_3343 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M483_3344 PF01641 SelR domain M483_3345 PF07023 Protein of unknown function (DUF1315) M483_3346 PF00857 Isochorismatase family M483_3347 PF00710 Asparaginase, N-terminal M483_3347 PF17763 Glutaminase/Asparaginase C-terminal domain M483_3348 PF01343 Peptidase family S49 M483_3349 PF00881 Nitroreductase family M483_3350 PF00586 AIR synthase related protein, N-terminal domain M483_3350 PF02769 AIR synthase related protein, C-terminal domain M483_3351 PF01131 DNA topoisomerase M483_3351 PF01751 Toprim domain M483_3352 PF07383 Protein of unknown function (DUF1496) M483_3353 PF00293 NUDIX domain M483_3354 PF03372 Endonuclease/Exonuclease/phosphatase family M483_3355 PF03466 LysR substrate binding domain M483_3355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3358 PF01842 ACT domain M483_3358 PF00551 Formyl transferase M483_3359 PF02810 SEC-C motif M483_336 PF01797 Transposase IS200 like M483_3360 PF00072 Response regulator receiver domain M483_3361 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M483_3361 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M483_3361 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M483_3362 PF00872 Transposase, Mutator family M483_3363 PF00816 H-NS histone family M483_3364 PF00265 Thymidine kinase M483_3365 PF00465 Iron-containing alcohol dehydrogenase M483_3365 PF00171 Aldehyde dehydrogenase family M483_3366 PF01914 MarC family integral membrane protein M483_3367 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_3368 PF00528 Binding-protein-dependent transport system inner membrane component M483_3369 PF12911 N-terminal TM domain of oligopeptide transport permease C M483_3369 PF00528 Binding-protein-dependent transport system inner membrane component M483_337 PF03825 Nucleoside H+ symporter M483_3370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_3370 PF00005 ABC transporter M483_3371 PF00005 ABC transporter M483_3371 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_3373 PF04269 Protein of unknown function, DUF440 M483_3374 PF13396 Phospholipase_D-nuclease N-terminal M483_3374 PF13091 PLD-like domain M483_3375 PF13505 Outer membrane protein beta-barrel domain M483_3378 PF03795 YCII-related domain M483_338 PF01048 Phosphorylase superfamily M483_3380 PF03544 Gram-negative bacterial TonB protein C-terminal M483_3381 PF00872 Transposase, Mutator family M483_3382 PF03061 Thioesterase superfamily M483_3383 PF04279 Intracellular septation protein A M483_3387 PF03922 OmpW family M483_3389 PF00290 Tryptophan synthase alpha chain M483_3390 PF00291 Pyridoxal-phosphate dependent enzyme M483_3391 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M483_3391 PF00218 Indole-3-glycerol phosphate synthase M483_3392 PF00591 Glycosyl transferase family, a/b domain M483_3392 PF02885 Glycosyl transferase family, helical bundle domain M483_3393 PF00117 Glutamine amidotransferase class-I M483_3394 PF04715 Anthranilate synthase component I, N terminal region M483_3394 PF00425 chorismate binding enzyme M483_3395 PF02811 PHP domain M483_3396 PF01300 Telomere recombination M483_3397 PF01479 S4 domain M483_3397 PF00849 RNA pseudouridylate synthase M483_3398 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M483_3399 PF00106 short chain dehydrogenase M483_34 PF03129 Anticodon binding domain M483_34 PF13393 Histidyl-tRNA synthetase M483_340 PF03466 LysR substrate binding domain M483_340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3400 PF01343 Peptidase family S49 M483_3400 PF08496 Peptidase family S49 N-terminal M483_3401 PF10692 Protein of unknown function (DUF2498) M483_3403 PF01751 Toprim domain M483_3403 PF08272 Topoisomerase I zinc-ribbon-like M483_3403 PF01396 Topoisomerase DNA binding C4 zinc finger M483_3403 PF01131 DNA topoisomerase M483_3405 PF03466 LysR substrate binding domain M483_3405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3407 PF00330 Aconitase family (aconitate hydratase) M483_3407 PF00694 Aconitase C-terminal domain M483_3408 PF00925 GTP cyclohydrolase II M483_3409 PF01569 PAP2 superfamily M483_341 PF02028 BCCT, betaine/carnitine/choline family transporter M483_3410 PF06305 Lipopolysaccharide assembly protein A domain M483_3411 PF18073 Rubredoxin metal binding domain M483_3413 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M483_3414 PF01253 Translation initiation factor SUI1 M483_3416 PF00596 Class II Aldolase and Adducin N-terminal domain M483_3418 PF00923 Transaldolase/Fructose-6-phosphate aldolase M483_3419 PF04328 Selenoprotein, putative M483_342 PF00440 Bacterial regulatory proteins, tetR family M483_342 PF13977 BetI-type transcriptional repressor, C-terminal M483_3420 PF02554 Carbon starvation protein CstA M483_3420 PF13722 5TM C-terminal transporter carbon starvation CstA M483_3421 PF08206 Ribonuclease B OB domain M483_3421 PF00773 RNB domain M483_3421 PF00575 S1 RNA binding domain M483_3421 PF17876 Cold shock domain M483_3422 PF07690 Major Facilitator Superfamily M483_3423 PF01370 NAD dependent epimerase/dehydratase family M483_3424 PF00633 Helix-hairpin-helix motif M483_3424 PF10576 Iron-sulfur binding domain of endonuclease III M483_3424 PF00730 HhH-GPD superfamily base excision DNA repair protein M483_3425 PF02508 Rnf-Nqr subunit, membrane protein M483_3426 PF04205 FMN-binding domain M483_3427 PF03116 NQR2, RnfD, RnfE family M483_3428 PF12833 Helix-turn-helix domain M483_3428 PF06445 GyrI-like small molecule binding domain M483_3429 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M483_3429 PF10531 SLBB domain M483_3429 PF13375 RnfC Barrel sandwich hybrid domain M483_3429 PF13237 4Fe-4S dicluster domain M483_343 PF00171 Aldehyde dehydrogenase family M483_3430 PF04060 Putative Fe-S cluster M483_3431 PF02508 Rnf-Nqr subunit, membrane protein M483_3432 PF10754 Protein of unknown function (DUF2569) M483_3433 PF00664 ABC transporter transmembrane region M483_3433 PF00005 ABC transporter M483_3433 PF03412 Peptidase C39 family M483_3434 PF00005 ABC transporter M483_3434 PF00664 ABC transporter transmembrane region M483_3435 PF13533 Biotin-lipoyl like M483_3437 PF03412 Peptidase C39 family M483_3437 PF00005 ABC transporter M483_3437 PF00664 ABC transporter transmembrane region M483_3439 PF11762 L-arabinose isomerase C-terminal domain M483_3439 PF02610 L-arabinose isomerase M483_344 PF00732 GMC oxidoreductase M483_344 PF05199 GMC oxidoreductase M483_3440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M483_3441 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M483_3442 PF00005 ABC transporter M483_3443 PF02653 Branched-chain amino acid transport system / permease component M483_3444 PF02653 Branched-chain amino acid transport system / permease component M483_3445 PF12833 Helix-turn-helix domain M483_3445 PF02311 AraC-like ligand binding domain M483_3446 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_3446 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M483_3447 PF13593 SBF-like CPA transporter family (DUF4137) M483_3449 PF06097 Bacterial protein of unknown function (DUF945) M483_3450 PF01238 Phosphomannose isomerase type I M483_3451 PF10415 Fumarase C C-terminus M483_3451 PF00206 Lyase M483_3452 PF05472 DNA replication terminus site-binding protein (Ter protein) M483_3453 PF07690 Major Facilitator Superfamily M483_3454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3454 PF03466 LysR substrate binding domain M483_3455 PF00480 ROK family M483_3458 PF00654 Voltage gated chloride channel M483_3459 PF06649 Protein of unknown function (DUF1161) M483_346 PF01027 Inhibitor of apoptosis-promoting Bax1 M483_3460 PF00356 Bacterial regulatory proteins, lacI family M483_3462 PF13407 Periplasmic binding protein domain M483_3463 PF09084 NMT1/THI5 like M483_3464 PF00528 Binding-protein-dependent transport system inner membrane component M483_3465 PF00005 ABC transporter M483_3466 PF01048 Phosphorylase superfamily M483_3466 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus M483_347 PF02391 MoaE protein M483_3472 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M483_3472 PF00205 Thiamine pyrophosphate enzyme, central domain M483_3472 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M483_3473 PF01842 ACT domain M483_3474 PF13419 Haloacid dehalogenase-like hydrolase M483_3476 PF00245 Alkaline phosphatase M483_3477 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M483_3477 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M483_3478 PF13545 Crp-like helix-turn-helix domain M483_3478 PF00027 Cyclic nucleotide-binding domain M483_3479 PF00582 Universal stress protein family M483_348 PF02597 ThiS family M483_3480 PF02233 NAD(P) transhydrogenase beta subunit M483_3481 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M483_3481 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M483_3481 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M483_3482 PF07338 Protein of unknown function (DUF1471) M483_3483 PF13520 Amino acid permease M483_3485 PF00486 Transcriptional regulatory protein, C terminal M483_3485 PF00072 Response regulator receiver domain M483_3486 PF00672 HAMP domain M483_3486 PF00512 His Kinase A (phospho-acceptor) domain M483_3486 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_3487 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M483_3488 PF01797 Transposase IS200 like M483_3489 PF14431 YwqJ-like deaminase M483_3489 PF18807 Tripartite Tc toxins repeat M483_349 PF01967 MoaC family M483_3491 PF04264 YceI-like domain M483_3492 PF01292 Prokaryotic cytochrome b561 M483_3494 PF00089 Trypsin M483_3497 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M483_3497 PF00271 Helicase conserved C-terminal domain M483_3497 PF04408 Helicase associated domain (HA2) M483_3497 PF11898 Domain of unknown function (DUF3418) M483_3497 PF00270 DEAD/DEAH box helicase M483_3498 PF02525 Flavodoxin-like fold M483_3499 PF04198 Putative sugar-binding domain M483_3499 PF00325 Bacterial regulatory proteins, crp family M483_35 PF04551 GcpE protein M483_350 PF06463 Molybdenum Cofactor Synthesis C M483_350 PF04055 Radical SAM superfamily M483_3500 PF01232 Mannitol dehydrogenase Rossmann domain M483_3500 PF08125 Mannitol dehydrogenase C-terminal domain M483_3501 PF07027 Protein of unknown function (DUF1318) M483_3502 PF13617 YnbE-like lipoprotein M483_3503 PF11739 Dicarboxylate transport M483_3504 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M483_3504 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M483_3505 PF03724 META domain M483_3506 PF03891 Domain of unknown function (DUF333) M483_3507 PF02308 MgtC family M483_3508 PF00893 Small Multidrug Resistance protein M483_3509 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M483_3509 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II M483_3509 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase M483_3509 PF10371 Domain of unknown function M483_3509 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg M483_3510 PF01171 PP-loop family M483_3512 PF07859 alpha/beta hydrolase fold M483_3512 PF13472 GDSL-like Lipase/Acylhydrolase family M483_3514 PF01544 CorA-like Mg2+ transporter protein M483_3515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_3516 PF00246 Zinc carboxypeptidase M483_3517 PF13378 Enolase C-terminal domain-like M483_3517 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M483_3518 PF08534 Redoxin M483_3519 PF02796 Helix-turn-helix domain of resolvase M483_3519 PF00665 Integrase core domain M483_352 PF01933 Uncharacterised protein family UPF0052 M483_3520 PF01695 IstB-like ATP binding protein M483_3521 PF01797 Transposase IS200 like M483_3522 PF18024 Helix-turn-helix domain M483_3522 PF00158 Sigma-54 interaction domain M483_3525 PF05128 Domain of unknown function (DUF697) M483_3526 PF04317 YcjX-like family, DUF463 M483_3528 PF04024 PspC domain M483_3529 PF06667 Phage shock protein B M483_353 PF09905 DNA-binding protein VF530 M483_3530 PF04012 PspA/IM30 family M483_3531 PF02954 Bacterial regulatory protein, Fis family M483_3531 PF00158 Sigma-54 interaction domain M483_3533 PF01797 Transposase IS200 like M483_3534 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_3535 PF00528 Binding-protein-dependent transport system inner membrane component M483_3536 PF12911 N-terminal TM domain of oligopeptide transport permease C M483_3536 PF00528 Binding-protein-dependent transport system inner membrane component M483_3537 PF00005 ABC transporter M483_3537 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M483_3538 PF00005 ABC transporter M483_354 PF00271 Helicase conserved C-terminal domain M483_354 PF12344 Ultra-violet resistance protein B M483_354 PF02151 UvrB/uvrC motif M483_354 PF04851 Type III restriction enzyme, res subunit M483_354 PF17757 UvrB interaction domain M483_3541 PF00854 POT family M483_3542 PF04893 Yip1 domain M483_3543 PF11656 YjbD family (DUF3811) M483_3544 PF00043 Glutathione S-transferase, C-terminal domain M483_3544 PF02798 Glutathione S-transferase, N-terminal domain M483_3545 PF08543 Phosphomethylpyrimidine kinase M483_3546 PF00579 tRNA synthetases class I (W and Y) M483_3546 PF01479 S4 domain M483_3547 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M483_3547 PF01243 Pyridoxamine 5'-phosphate oxidase M483_3548 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme M483_3549 PF03702 Anhydro-N-acetylmuramic acid kinase M483_3550 PF05433 Glycine zipper 2TM domain M483_3551 PF00248 Aldo/keto reductase family M483_3552 PF06945 Protein of unknown function (DUF1289) M483_3553 PF08019 Phosphoethanolamine transferase EptA/EptB M483_3553 PF00884 Sulfatase M483_3554 PF00440 Bacterial regulatory proteins, tetR family M483_3554 PF16925 Tetracyclin repressor-like, C-terminal domain M483_3555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M483_3556 PF18807 Tripartite Tc toxins repeat M483_3556 PF14431 YwqJ-like deaminase M483_3557 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M483_3558 PF00929 Exonuclease M483_3559 PF00462 Glutaredoxin M483_3561 PF00877 NlpC/P60 family M483_3562 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M483_3562 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M483_3564 PF00356 Bacterial regulatory proteins, lacI family M483_3565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3565 PF03466 LysR substrate binding domain M483_3566 PF07690 Major Facilitator Superfamily M483_3568 PF00677 Lumazine binding domain M483_3569 PF01554 MatE M483_357 PF08241 Methyltransferase domain M483_3572 PF02887 Pyruvate kinase, alpha/beta domain M483_3572 PF00224 Pyruvate kinase, barrel domain M483_3573 PF04728 Lipoprotein leucine-zipper M483_3574 PF01797 Transposase IS200 like M483_3575 PF02796 Helix-turn-helix domain of resolvase M483_3575 PF00665 Integrase core domain M483_3576 PF01695 IstB-like ATP binding protein M483_3577 PF01695 IstB-like ATP binding protein M483_3578 PF03734 L,D-transpeptidase catalytic domain M483_3578 PF17969 L,D-transpeptidase C-terminal domain M483_3578 PF01476 LysM domain M483_3579 PF02657 Fe-S metabolism associated domain M483_358 PF00155 Aminotransferase class I and II M483_3580 PF00266 Aminotransferase class-V M483_3581 PF01458 Uncharacterized protein family (UPF0051) M483_3582 PF00005 ABC transporter M483_3583 PF01458 Uncharacterized protein family (UPF0051) M483_3584 PF01521 Iron-sulphur cluster biosynthesis M483_3585 PF03061 Thioesterase superfamily M483_3586 PF01565 FAD binding domain M483_3586 PF02913 FAD linked oxidases, C-terminal domain M483_3586 PF13183 4Fe-4S dicluster domain M483_3587 PF01594 AI-2E family transporter M483_3588 PF00391 PEP-utilising enzyme, mobile domain M483_3588 PF02896 PEP-utilising enzyme, TIM barrel domain M483_3588 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M483_3589 PF03618 Kinase/pyrophosphorylase M483_359 PF04055 Radical SAM superfamily M483_359 PF06968 Biotin and Thiamin Synthesis associated domain M483_3590 PF00793 DAHP synthetase I family M483_3591 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M483_3592 PF03099 Biotin/lipoate A/B protein ligase family M483_3592 PF10437 Bacterial lipoate protein ligase C-terminus M483_3593 PF00877 NlpC/P60 family M483_3595 PF00892 EamA-like transporter family M483_3596 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M483_3597 PF01522 Polysaccharide deacetylase M483_3598 PF01370 NAD dependent epimerase/dehydratase family M483_3598 PF02911 Formyl transferase, C-terminal domain M483_3598 PF00551 Formyl transferase M483_3599 PF00535 Glycosyl transferase family 2 M483_36 PF13464 Domain of unknown function (DUF4115) M483_360 PF00202 Aminotransferase class-III M483_3600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M483_3601 PF00005 ABC transporter M483_3602 PF00255 Glutathione peroxidase M483_3603 PF01032 FecCD transport family M483_3605 PF00216 Bacterial DNA-binding protein M483_3606 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M483_3606 PF01588 Putative tRNA binding domain M483_3606 PF03483 B3/4 domain M483_3606 PF03484 tRNA synthetase B5 domain M483_3606 PF03147 Ferredoxin-fold anticodon binding domain M483_3607 PF01409 tRNA synthetases class II core domain (F) M483_3607 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M483_3608 PF00453 Ribosomal protein L20 M483_3609 PF01632 Ribosomal protein L35 M483_361 PF10282 Lactonase, 7-bladed beta-propeller M483_3610 PF05198 Translation initiation factor IF-3, N-terminal domain M483_3610 PF00707 Translation initiation factor IF-3, C-terminal domain M483_3611 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M483_3611 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M483_3611 PF03129 Anticodon binding domain M483_3611 PF02824 TGS domain M483_3612 PF13619 KTSC domain M483_3614 PF01914 MarC family integral membrane protein M483_3615 PF01464 Transglycosylase SLT domain M483_3616 PF01297 Zinc-uptake complex component A periplasmic M483_3617 PF00005 ABC transporter M483_3618 PF00950 ABC 3 transport family M483_3619 PF00950 ABC 3 transport family M483_3621 PF14002 YniB-like protein M483_3622 PF13419 Haloacid dehalogenase-like hydrolase M483_3623 PF00872 Transposase, Mutator family M483_3624 PF07883 Cupin domain M483_3625 PF04962 KduI/IolB family M483_3627 PF06917 Periplasmic pectate lyase M483_3628 PF00528 Binding-protein-dependent transport system inner membrane component M483_3629 PF00528 Binding-protein-dependent transport system inner membrane component M483_363 PF00005 ABC transporter M483_363 PF03459 TOBE domain M483_3630 PF00005 ABC transporter M483_3630 PF03459 TOBE domain M483_3630 PF17912 MalK OB fold domain M483_3631 PF01547 Bacterial extracellular solute-binding protein M483_3632 PF06178 Oligogalacturonate-specific porin protein (KdgM) M483_3633 PF04307 LexA-binding, inner membrane-associated putative hydrolase M483_3635 PF01510 N-acetylmuramoyl-L-alanine amidase M483_3636 PF09339 IclR helix-turn-helix domain M483_3636 PF01614 Bacterial transcriptional regulator M483_3637 PF14583 Oligogalacturonate lyase M483_3638 PF07690 Major Facilitator Superfamily M483_3639 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_3639 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_364 PF00528 Binding-protein-dependent transport system inner membrane component M483_3641 PF13953 PapC C-terminal domain M483_3641 PF00577 Outer membrane usher protein M483_3641 PF13954 PapC N-terminal domain M483_3642 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_3642 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_3643 PF00419 Fimbrial protein M483_3644 PF01435 Peptidase family M48 M483_3646 PF17804 Tail specific protease N-terminal domain M483_3646 PF03572 Peptidase family S41 M483_3646 PF11818 C-terminal domain of tail specific protease (DUF3340) M483_3646 PF00595 PDZ domain M483_3647 PF04352 ProQ/FINO family M483_3647 PF17516 ProQ C-terminal domain M483_3648 PF13185 GAF domain M483_3649 PF04403 Paraquat-inducible protein A M483_3650 PF02470 MlaD protein M483_3654 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_3654 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_3657 PF07351 Protein of unknown function (DUF1480) M483_3659 PF00665 Integrase core domain M483_3659 PF02796 Helix-turn-helix domain of resolvase M483_366 PF10766 Multidrug efflux pump-associated protein AcrZ M483_3660 PF01695 IstB-like ATP binding protein M483_3666 PF00842 Alanine racemase, C-terminal domain M483_3666 PF01168 Alanine racemase, N-terminal domain M483_3669 PF13018 Extended Signal Peptide of Type V secretion system M483_3669 PF03895 YadA-like membrane anchor domain M483_3669 PF05662 Coiled stalk of trimeric autotransporter adhesin M483_3669 PF05658 Head domain of trimeric autotransporter adhesin M483_367 PF03459 TOBE domain M483_367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3670 PF13018 Extended Signal Peptide of Type V secretion system M483_3670 PF05662 Coiled stalk of trimeric autotransporter adhesin M483_3670 PF05658 Head domain of trimeric autotransporter adhesin M483_3670 PF03895 YadA-like membrane anchor domain M483_3671 PF01510 N-acetylmuramoyl-L-alanine amidase M483_3672 PF04344 Chemotaxis phosphatase, CheZ M483_3673 PF00072 Response regulator receiver domain M483_3674 PF00072 Response regulator receiver domain M483_3674 PF01339 CheB methylesterase M483_3675 PF03705 CheR methyltransferase, all-alpha domain M483_3675 PF01739 CheR methyltransferase, SAM binding domain M483_3676 PF02203 Tar ligand binding domain homologue M483_3676 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_3676 PF00672 HAMP domain M483_3677 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_3677 PF00672 HAMP domain M483_3677 PF02203 Tar ligand binding domain homologue M483_368 PF00005 ABC transporter M483_3680 PF12951 Passenger-associated-transport-repeat M483_3681 PF13309 HTH domain M483_3681 PF08348 YheO-like PAS domain M483_3683 PF01042 Endoribonuclease L-PSP M483_3684 PF07690 Major Facilitator Superfamily M483_3685 PF01584 CheW-like domain M483_3686 PF02895 Signal transducing histidine kinase, homodimeric domain M483_3686 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_3686 PF01627 Hpt domain M483_3686 PF01584 CheW-like domain M483_3686 PF09078 CheY binding M483_3687 PF00691 OmpA family M483_3687 PF13677 Membrane MotB of proton-channel complex MotA/MotB M483_3688 PF01618 MotA/TolQ/ExbB proton channel family M483_3689 PF05280 Flagellar transcriptional activator (FlhC) M483_3690 PF05247 Flagellar transcriptional activator (FlhD) M483_3691 PF00689 Cation transporting ATPase, C-terminus M483_3691 PF00690 Cation transporter/ATPase, N-terminus M483_3692 PF02308 MgtC family M483_3693 PF00672 HAMP domain M483_3693 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_3693 PF02203 Tar ligand binding domain homologue M483_3694 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_3694 PF02203 Tar ligand binding domain homologue M483_3694 PF00672 HAMP domain M483_3695 PF10781 Dextransucrase DSRB M483_3696 PF00313 'Cold-shock' DNA-binding domain M483_3697 PF16353 Domain of unknown function(DUF4981) M483_3697 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M483_3697 PF02929 Beta galactosidase small chain M483_3697 PF00703 Glycosyl hydrolases family 2 M483_3697 PF02837 Glycosyl hydrolases family 2, sugar binding domain M483_3698 PF02801 Beta-ketoacyl synthase, C-terminal domain M483_3698 PF00550 Phosphopantetheine attachment site M483_3698 PF00698 Acyl transferase domain M483_3698 PF08240 Alcohol dehydrogenase GroES-like domain M483_3698 PF00107 Zinc-binding dehydrogenase M483_3698 PF16197 Ketoacyl-synthetase C-terminal extension M483_3698 PF00109 Beta-ketoacyl synthase, N-terminal domain M483_3698 PF08659 KR domain M483_3698 PF14765 Polyketide synthase dehydratase M483_3699 PF10777 Inner membrane protein YlaC M483_3700 PF13404 AsnC-type helix-turn-helix domain M483_3700 PF01037 Lrp/AsnC ligand binding domain M483_3702 PF14001 YdfZ protein M483_3703 PF00328 Histidine phosphatase superfamily (branch 2) M483_3705 PF01638 HxlR-like helix-turn-helix M483_3706 PF05368 NmrA-like family M483_3707 PF08447 PAS fold M483_3707 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_3709 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M483_3709 PF00356 Bacterial regulatory proteins, lacI family M483_3710 PF00180 Isocitrate/isopropylmalate dehydrogenase M483_3711 PF00849 RNA pseudouridylate synthase M483_3712 PF00293 NUDIX domain M483_3714 PF04356 Protein of unknown function (DUF489) M483_3715 PF08328 Adenylosuccinate lyase C-terminal M483_3715 PF00206 Lyase M483_3717 PF00486 Transcriptional regulatory protein, C terminal M483_3717 PF00072 Response regulator receiver domain M483_3718 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_3718 PF08918 PhoQ Sensor M483_3719 PF08007 Cupin superfamily protein M483_372 PF16363 GDP-mannose 4,6 dehydratase M483_3720 PF07687 Peptidase dimerisation domain M483_3720 PF01546 Peptidase family M20/M25/M40 M483_3721 PF02146 Sir2 family M483_3722 PF00480 ROK family M483_3723 PF02687 FtsX-like permease family M483_3723 PF12704 MacB-like periplasmic core domain M483_3724 PF00005 ABC transporter M483_3725 PF02687 FtsX-like permease family M483_3725 PF12704 MacB-like periplasmic core domain M483_3726 PF02559 CarD-like/TRCF domain M483_3726 PF00270 DEAD/DEAH box helicase M483_3726 PF00271 Helicase conserved C-terminal domain M483_3726 PF03461 TRCF domain M483_3726 PF17757 UvrB interaction domain M483_3727 PF05433 Glycine zipper 2TM domain M483_3728 PF00872 Transposase, Mutator family M483_373 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M483_373 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M483_3731 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_3732 PF05728 Uncharacterised protein family (UPF0227) M483_3733 PF00933 Glycosyl hydrolase family 3 N terminal domain M483_3734 PF01636 Phosphotransferase enzyme family M483_3735 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M483_3735 PF13036 Peptidoglycan-synthase activator LpoB M483_3736 PF07233 Protein of unknown function (DUF1425) M483_3737 PF01230 HIT domain M483_3738 PF08501 Shikimate dehydrogenase substrate binding domain M483_3739 PF01797 Transposase IS200 like M483_374 PF10509 Galactokinase galactose-binding signature M483_374 PF08544 GHMP kinases C terminal M483_374 PF00288 GHMP kinases N terminal domain M483_3740 PF02378 Phosphotransferase system, EIIC M483_3740 PF00367 phosphotransferase system, EIIB M483_3741 PF01026 TatD related DNase M483_3742 PF09115 DNA polymerase III, delta subunit, C terminal M483_3743 PF02223 Thymidylate kinase M483_3744 PF02618 YceG-like family M483_3745 PF01063 Amino-transferase class IV M483_3746 PF01797 Transposase IS200 like M483_3747 PF00109 Beta-ketoacyl synthase, N-terminal domain M483_3747 PF02801 Beta-ketoacyl synthase, C-terminal domain M483_3748 PF00550 Phosphopantetheine attachment site M483_3750 PF00698 Acyl transferase domain M483_3751 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M483_3751 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M483_3752 PF02504 Fatty acid synthesis protein M483_3753 PF01783 Ribosomal L32p protein family M483_3754 PF02620 Large ribosomal RNA subunit accumulation protein YceD M483_3755 PF02545 Maf-like protein M483_3756 PF01479 S4 domain M483_3756 PF00849 RNA pseudouridylate synthase M483_3757 PF10150 Ribonuclease E/G family M483_3757 PF00575 S1 RNA binding domain M483_3757 PF12111 Polyribonucleotide phosphorylase C terminal M483_3758 PF03992 Antibiotic biosynthesis monooxygenase M483_3759 PF01979 Amidohydrolase family M483_376 PF01263 Aldose 1-epimerase M483_3760 PF06183 DinI-like family M483_3761 PF00872 Transposase, Mutator family M483_3762 PF13991 BssS protein family M483_3763 PF01266 FAD dependent oxidoreductase M483_3764 PF00196 Bacterial regulatory proteins, luxR family M483_3765 PF01594 AI-2E family transporter M483_3769 PF03472 Autoinducer binding domain M483_3769 PF00196 Bacterial regulatory proteins, luxR family M483_3770 PF00765 Autoinducer synthase M483_3771 PF03466 LysR substrate binding domain M483_3771 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3773 PF00083 Sugar (and other) transporter M483_3775 PF00248 Aldo/keto reductase family M483_3776 PF09618 CRISPR-associated protein (Cas_Csy4) M483_3777 PF09615 CRISPR-associated protein (Cas_Csy3) M483_3778 PF09614 CRISPR-associated protein (Cas_Csy2) M483_3779 PF09611 CRISPR-associated protein (Cas_Csy1) M483_378 PF00300 Histidine phosphatase superfamily (branch 1) M483_3781 PF01867 CRISPR associated protein Cas1 M483_3782 PF00924 Mechanosensitive ion channel M483_3786 PF04041 beta-1,4-mannooligosaccharide phosphorylase M483_3787 PF00528 Binding-protein-dependent transport system inner membrane component M483_3788 PF00528 Binding-protein-dependent transport system inner membrane component M483_379 PF00793 DAHP synthetase I family M483_3790 PF00356 Bacterial regulatory proteins, lacI family M483_3791 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M483_3791 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M483_3791 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M483_3791 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M483_3792 PF00005 ABC transporter M483_3792 PF17912 MalK OB fold domain M483_3793 PF00872 Transposase, Mutator family M483_3795 PF15526 Novel toxin 21 M483_3795 PF05860 haemagglutination activity domain M483_3795 PF04829 Pre-toxin domain with VENN motif M483_3795 PF13332 Hemagglutinin repeat M483_3795 PF05594 Haemagluttinin repeat M483_3799 PF13332 Hemagglutinin repeat M483_3799 PF05860 haemagglutination activity domain M483_3799 PF04829 Pre-toxin domain with VENN motif M483_3799 PF13018 Extended Signal Peptide of Type V secretion system M483_38 PF04055 Radical SAM superfamily M483_380 PF00793 DAHP synthetase I family M483_3802 PF13018 Extended Signal Peptide of Type V secretion system M483_3802 PF13332 Hemagglutinin repeat M483_3802 PF05860 haemagglutination activity domain M483_3802 PF04829 Pre-toxin domain with VENN motif M483_3803 PF08479 POTRA domain, ShlB-type M483_3803 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M483_3803 PF17287 POTRA domain M483_3804 PF00970 Oxidoreductase FAD-binding domain M483_3804 PF00111 2Fe-2S iron-sulfur cluster binding domain M483_3804 PF00175 Oxidoreductase NAD-binding domain M483_3805 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M483_3805 PF00355 Rieske [2Fe-2S] domain M483_3806 PF02028 BCCT, betaine/carnitine/choline family transporter M483_3807 PF00180 Isocitrate/isopropylmalate dehydrogenase M483_3808 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3808 PF03466 LysR substrate binding domain M483_3809 PF00356 Bacterial regulatory proteins, lacI family M483_381 PF01545 Cation efflux family M483_3810 PF02653 Branched-chain amino acid transport system / permease component M483_3811 PF00005 ABC transporter M483_3812 PF00005 ABC transporter M483_3813 PF13407 Periplasmic binding protein domain M483_3814 PF08240 Alcohol dehydrogenase GroES-like domain M483_3814 PF00107 Zinc-binding dehydrogenase M483_3818 PF13505 Outer membrane protein beta-barrel domain M483_3819 PF00892 EamA-like transporter family M483_382 PF04973 Nicotinamide mononucleotide transporter M483_3821 PF13649 Methyltransferase domain M483_3822 PF00210 Ferritin-like domain M483_3824 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_3825 PF00528 Binding-protein-dependent transport system inner membrane component M483_3826 PF00005 ABC transporter M483_3827 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M483_3827 PF08447 PAS fold M483_3827 PF13426 PAS domain M483_3828 PF05971 RNA methyltransferase M483_3829 PF07338 Protein of unknown function (DUF1471) M483_383 PF02445 Quinolinate synthetase A protein M483_3830 PF02885 Glycosyl transferase family, helical bundle domain M483_3831 PF13193 AMP-binding enzyme C-terminal domain M483_3831 PF00501 AMP-binding enzyme M483_3832 PF13378 Enolase C-terminal domain-like M483_3833 PF00378 Enoyl-CoA hydratase/isomerase M483_3834 PF12697 Alpha/beta hydrolase family M483_3835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M483_3835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M483_3835 PF16582 Middle domain of thiamine pyrophosphate M483_3836 PF00425 chorismate binding enzyme M483_3838 PF05957 Bacterial protein of unknown function (DUF883) M483_3840 PF00920 Dehydratase family M483_3841 PF03928 Haem-degrading M483_3842 PF07690 Major Facilitator Superfamily M483_3843 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M483_3843 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M483_3844 PF00356 Bacterial regulatory proteins, lacI family M483_3846 PF00106 short chain dehydrogenase M483_3847 PF01202 Shikimate kinase M483_3848 PF04074 YhcH/YjgK/YiaL M483_3850 PF00361 Proton-conducting membrane transporter M483_3851 PF00361 Proton-conducting membrane transporter M483_3852 PF00361 Proton-conducting membrane transporter M483_3852 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M483_3853 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M483_3854 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M483_3855 PF12838 4Fe-4S dicluster domain M483_3856 PF00146 NADH dehydrogenase M483_3857 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M483_3857 PF00384 Molybdopterin oxidoreductase M483_3857 PF01568 Molydopterin dinucleotide binding domain M483_3857 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M483_3858 PF10531 SLBB domain M483_3858 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M483_3858 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M483_3860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M483_3860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M483_3861 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M483_3862 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M483_3863 PF03466 LysR substrate binding domain M483_3863 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3864 PF00155 Aminotransferase class I and II M483_3866 PF02080 TrkA-C domain M483_3866 PF03600 Citrate transporter M483_3867 PF13419 Haloacid dehalogenase-like hydrolase M483_3868 PF03887 YfbU domain M483_3869 PF04217 Protein of unknown function, DUF412 M483_3870 PF00871 Acetokinase family M483_3871 PF07085 DRTGG domain M483_3871 PF01515 Phosphate acetyl/butaryl transferase M483_3872 PF00356 Bacterial regulatory proteins, lacI family M483_3872 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M483_3873 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M483_3875 PF03611 PTS system sugar-specific permease component M483_3876 PF00293 NUDIX domain M483_3877 PF12850 Calcineurin-like phosphoesterase superfamily domain M483_3878 PF12850 Calcineurin-like phosphoesterase superfamily domain M483_388 PF13174 Tetratricopeptide repeat M483_388 PF16331 TolA binding protein trimerisation M483_3880 PF01370 NAD dependent epimerase/dehydratase family M483_3880 PF08338 Domain of unknown function (DUF1731) M483_3881 PF00005 ABC transporter M483_3882 PF00528 Binding-protein-dependent transport system inner membrane component M483_3883 PF00528 Binding-protein-dependent transport system inner membrane component M483_3884 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_3885 PF02441 Flavoprotein M483_3886 PF00156 Phosphoribosyl transferase domain M483_3887 PF02674 Colicin V production protein M483_3888 PF05036 Sporulation related domain M483_3889 PF08245 Mur ligase middle domain M483_3889 PF02875 Mur ligase family, glutamate ligase domain M483_389 PF00691 OmpA family M483_3890 PF01039 Carboxyl transferase domain M483_3890 PF17848 Acetyl-coA carboxylase zinc finger domain M483_3891 PF09335 SNARE associated Golgi protein M483_3892 PF01416 tRNA pseudouridine synthase M483_3893 PF01118 Semialdehyde dehydrogenase, NAD binding domain M483_3893 PF02774 Semialdehyde dehydrogenase, dimerisation domain M483_3894 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M483_3894 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M483_3894 PF11890 Domain of unknown function (DUF3410) M483_3896 PF00892 EamA-like transporter family M483_3898 PF00419 Fimbrial protein M483_3899 PF01177 Asp/Glu/Hydantoin racemase M483_39 PF00334 Nucleoside diphosphate kinase M483_390 PF04052 TolB amino-terminal domain M483_390 PF07676 WD40-like Beta Propeller Repeat M483_3900 PF02801 Beta-ketoacyl synthase, C-terminal domain M483_3900 PF00109 Beta-ketoacyl synthase, N-terminal domain M483_3901 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M483_3901 PF01266 FAD dependent oxidoreductase M483_3902 PF08891 YfcL protein M483_3903 PF04315 Elongation factor P hydroxylase M483_3904 PF01925 Sulfite exporter TauE/SafE M483_3905 PF03411 Penicillin-insensitive murein endopeptidase M483_3906 PF01264 Chorismate synthase M483_3907 PF05175 Methyltransferase small domain M483_3908 PF01713 Smr domain M483_3909 PF00300 Histidine phosphatase superfamily (branch 1) M483_391 PF06519 TolA C-terminal M483_391 PF06519 TolA C-terminal M483_3910 PF00378 Enoyl-CoA hydratase/isomerase M483_3910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M483_3910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M483_3911 PF00108 Thiolase, N-terminal domain M483_3911 PF02803 Thiolase, C-terminal domain M483_3912 PF04175 Protein of unknown function (DUF406) M483_3913 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M483_3914 PF04333 MlaA lipoprotein M483_3915 PF03918 Cytochrome C biogenesis protein M483_3916 PF03918 Cytochrome C biogenesis protein M483_3917 PF08534 Redoxin M483_3918 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M483_3918 PF01578 Cytochrome C assembly protein M483_3919 PF03100 CcmE M483_392 PF02472 Biopolymer transport protein ExbD/TolR M483_3920 PF04995 Heme exporter protein D (CcmD) M483_3921 PF01578 Cytochrome C assembly protein M483_3922 PF03379 CcmB protein M483_3923 PF00005 ABC transporter M483_3926 PF04011 LemA family M483_3928 PF08274 PhnA Zinc-Ribbon M483_3928 PF03831 PhnA domain M483_393 PF01618 MotA/TolQ/ExbB proton channel family M483_3934 PF04717 Type VI secretion system, phage-baseplate injector M483_3938 PF01695 IstB-like ATP binding protein M483_3939 PF02796 Helix-turn-helix domain of resolvase M483_3939 PF00665 Integrase core domain M483_394 PF03061 Thioesterase superfamily M483_3947 PF00577 Outer membrane usher protein M483_3947 PF13954 PapC N-terminal domain M483_3947 PF13953 PapC C-terminal domain M483_3948 PF00872 Transposase, Mutator family M483_3949 PF00872 Transposase, Mutator family M483_395 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) M483_3950 PF13953 PapC C-terminal domain M483_3950 PF13954 PapC N-terminal domain M483_3950 PF00577 Outer membrane usher protein M483_3951 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_3951 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_3952 PF16970 Type-1 fimbrial protein, A M483_3953 PF17871 AAA lid domain M483_3953 PF10431 C-terminal, D2-small domain, of ClpB protein M483_3953 PF00004 ATPase family associated with various cellular activities (AAA) M483_3953 PF07724 AAA domain (Cdc48 subfamily) M483_396 PF08173 Membrane bound YbgT-like protein M483_3963 PF13406 Transglycosylase SLT domain M483_3965 PF00528 Binding-protein-dependent transport system inner membrane component M483_3966 PF00005 ABC transporter M483_3968 PF05638 Type VI secretion system effector, Hcp M483_397 PF02322 Cytochrome bd terminal oxidase subunit II M483_3970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M483_3970 PF01568 Molydopterin dinucleotide binding domain M483_3970 PF00384 Molybdopterin oxidoreductase M483_3971 PF12800 4Fe-4S binding domain M483_3971 PF13247 4Fe-4S dicluster domain M483_3972 PF04976 DMSO reductase anchor subunit (DmsC) M483_3973 PF02613 Nitrate reductase delta subunit M483_3975 PF05643 Putative bacterial lipoprotein (DUF799) M483_3977 PF03783 Curli production assembly/transport component CsgG M483_3979 PF01292 Prokaryotic cytochrome b561 M483_398 PF01654 Cytochrome bd terminal oxidase subunit I M483_3980 PF00155 Aminotransferase class I and II M483_3981 PF07350 Protein of unknown function (DUF1479) M483_3982 PF02685 Glucokinase M483_3984 PF03466 LysR substrate binding domain M483_3984 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_3985 PF00248 Aldo/keto reductase family M483_3987 PF01566 Natural resistance-associated macrophage protein M483_3988 PF01773 Na+ dependent nucleoside transporter N-terminus M483_3988 PF07662 Na+ dependent nucleoside transporter C-terminus M483_3988 PF07670 Nucleoside recognition M483_399 PF01797 Transposase IS200 like M483_3993 PF00749 tRNA synthetases class I (E and Q), catalytic domain M483_3995 PF01797 Transposase IS200 like M483_3998 PF12843 Putative quorum-sensing-regulated virulence factor M483_3999 PF01653 NAD-dependent DNA ligase adenylation domain M483_3999 PF00533 BRCA1 C Terminus (BRCT) domain M483_3999 PF03120 NAD-dependent DNA ligase OB-fold domain M483_3999 PF12826 Helix-hairpin-helix motif M483_3999 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M483_4 PF00873 AcrB/AcrD/AcrF family M483_400 PF00549 CoA-ligase M483_400 PF02629 CoA binding domain M483_4000 PF04354 ZipA, C-terminal FtsZ-binding domain M483_4002 PF00291 Pyridoxal-phosphate dependent enzyme M483_4003 PF00381 PTS HPr component phosphorylation site M483_4004 PF05524 PEP-utilising enzyme, N-terminal M483_4004 PF00391 PEP-utilising enzyme, mobile domain M483_4004 PF02896 PEP-utilising enzyme, TIM barrel domain M483_4005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M483_4008 PF00672 HAMP domain M483_4008 PF16527 Two-component sensor protein CpxA, periplasmic domain M483_4008 PF00512 His Kinase A (phospho-acceptor) domain M483_4008 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_4009 PF00072 Response regulator receiver domain M483_4009 PF00486 Transcriptional regulatory protein, C terminal M483_401 PF00549 CoA-ligase M483_401 PF08442 ATP-grasp domain M483_4010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_4011 PF00005 ABC transporter M483_4011 PF12704 MacB-like periplasmic core domain M483_4011 PF02687 FtsX-like permease family M483_4012 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_4012 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M483_4013 PF00474 Sodium:solute symporter family M483_4015 PF00557 Metallopeptidase family M24 M483_4015 PF05195 Aminopeptidase P, N-terminal domain M483_4017 PF00155 Aminotransferase class I and II M483_4019 PF00672 HAMP domain M483_4019 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_4019 PF00512 His Kinase A (phospho-acceptor) domain M483_402 PF02817 e3 binding domain M483_402 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M483_402 PF00364 Biotin-requiring enzyme M483_4020 PF00072 Response regulator receiver domain M483_4020 PF00486 Transcriptional regulatory protein, C terminal M483_4022 PF00291 Pyridoxal-phosphate dependent enzyme M483_4023 PF00005 ABC transporter M483_4024 PF00528 Binding-protein-dependent transport system inner membrane component M483_4025 PF00528 Binding-protein-dependent transport system inner membrane component M483_4027 PF07690 Major Facilitator Superfamily M483_4028 PF01418 Helix-turn-helix domain, rpiR family M483_4028 PF01380 SIS domain M483_4029 PF04074 YhcH/YjgK/YiaL M483_403 PF16870 2-oxoglutarate dehydrogenase C-terminal M483_403 PF16078 2-oxoglutarate dehydrogenase N-terminus M483_403 PF00676 Dehydrogenase E1 component M483_403 PF02779 Transketolase, pyrimidine binding domain M483_4030 PF00480 ROK family M483_4031 PF12468 Type III secretion system leucine rich repeat protein M483_4032 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M483_4033 PF00701 Dihydrodipicolinate synthetase family M483_4034 PF04261 Dyp-type peroxidase family M483_4035 PF06572 Protein of unknown function (DUF1131) M483_4037 PF04076 Bacterial OB fold (BOF) protein M483_4038 PF16168 Adhesin of bacterial autotransporter system, probable stalk M483_4038 PF03797 Autotransporter beta-domain M483_4038 PF13018 Extended Signal Peptide of Type V secretion system M483_4038 PF03212 Pertactin M483_404 PF13085 2Fe-2S iron-sulfur cluster binding domain M483_4041 PF00583 Acetyltransferase (GNAT) family M483_4042 PF01218 Coproporphyrinogen III oxidase M483_4043 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M483_4044 PF01515 Phosphate acetyl/butaryl transferase M483_4044 PF03949 Malic enzyme, NAD binding domain M483_4044 PF00390 Malic enzyme, N-terminal domain M483_4045 PF00293 NUDIX domain M483_4046 PF03264 NapC/NirT cytochrome c family, N-terminal region M483_4047 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) M483_4048 PF00384 Molybdopterin oxidoreductase M483_4048 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M483_4048 PF01568 Molydopterin dinucleotide binding domain M483_4048 PF10518 TAT (twin-arginine translocation) pathway signal sequence M483_4049 PF03927 NapD protein M483_405 PF02910 Fumarate reductase flavoprotein C-term M483_405 PF00890 FAD binding domain M483_4050 PF12800 4Fe-4S binding domain M483_4050 PF00037 4Fe-4S binding domain M483_4050 PF13187 4Fe-4S dicluster domain M483_4051 PF00072 Response regulator receiver domain M483_4051 PF00196 Bacterial regulatory proteins, luxR family M483_4053 PF00873 AcrB/AcrD/AcrF family M483_4055 PF04307 LexA-binding, inner membrane-associated putative hydrolase M483_4056 PF04055 Radical SAM superfamily M483_4056 PF13186 Iron-sulfur cluster-binding domain M483_4057 PF00884 Sulfatase M483_4058 PF00005 ABC transporter M483_4058 PF08402 TOBE domain M483_4059 PF00528 Binding-protein-dependent transport system inner membrane component M483_406 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M483_4062 PF03960 ArsC family M483_4063 PF01546 Peptidase family M20/M25/M40 M483_4063 PF07687 Peptidase dimerisation domain M483_4064 PF02557 D-alanyl-D-alanine carboxypeptidase M483_4065 PF13980 Uncharacterised protein family (UPF0370) M483_4066 PF13718 GNAT acetyltransferase 2 M483_4066 PF08351 Domain of unknown function (DUF1726) M483_4066 PF05127 Helicase M483_4066 PF17176 tRNA-binding domain M483_4067 PF04284 Protein of unknown function (DUF441) M483_4068 PF04228 Putative neutral zinc metallopeptidase M483_4069 PF01259 SAICAR synthetase M483_407 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M483_4070 PF01797 Transposase IS200 like M483_4071 PF06804 NlpB/DapX lipoprotein M483_4072 PF00701 Dihydrodipicolinate synthetase family M483_4073 PF01842 ACT domain M483_4074 PF00578 AhpC/TSA family M483_4077 PF01594 AI-2E family transporter M483_4078 PF01435 Peptidase family M48 M483_4078 PF07720 Tetratricopeptide repeat M483_4079 PF03960 ArsC family M483_408 PF00285 Citrate synthase, C-terminal domain M483_4080 PF00308 Bacterial dnaA protein M483_4081 PF01797 Transposase IS200 like M483_4083 PF02769 AIR synthase related protein, C-terminal domain M483_4083 PF00586 AIR synthase related protein, N-terminal domain M483_4084 PF00551 Formyl transferase M483_4085 PF13302 Acetyltransferase (GNAT) domain M483_4088 PF00005 ABC transporter M483_4089 PF00528 Binding-protein-dependent transport system inner membrane component M483_409 PF01025 GrpE M483_4090 PF00528 Binding-protein-dependent transport system inner membrane component M483_4091 PF02503 Polyphosphate kinase middle domain M483_4091 PF13090 Polyphosphate kinase C-terminal domain 2 M483_4091 PF17941 Polyphosphate kinase C-terminal domain 1 M483_4091 PF13089 Polyphosphate kinase N-terminal domain M483_4092 PF02541 Ppx/GppA phosphatase family M483_4093 PF03448 MgtE intracellular N domain M483_4093 PF01769 Divalent cation transporter M483_4093 PF00571 CBS domain M483_4094 PF00012 Hsp70 protein M483_4095 PF00528 Binding-protein-dependent transport system inner membrane component M483_4096 PF00528 Binding-protein-dependent transport system inner membrane component M483_4098 PF00202 Aminotransferase class-III M483_4099 PF00317 Ribonucleotide reductase, all-alpha domain M483_4099 PF03477 ATP cone domain M483_4099 PF02867 Ribonucleotide reductase, barrel domain M483_41 PF03797 Autotransporter beta-domain M483_41 PF16168 Adhesin of bacterial autotransporter system, probable stalk M483_41 PF03212 Pertactin M483_410 PF01513 ATP-NAD kinase M483_4100 PF00268 Ribonucleotide reductase, small chain M483_4102 PF01695 IstB-like ATP binding protein M483_4103 PF02796 Helix-turn-helix domain of resolvase M483_4103 PF00665 Integrase core domain M483_4104 PF01797 Transposase IS200 like M483_4108 PF01797 Transposase IS200 like M483_4109 PF00665 Integrase core domain M483_4109 PF02796 Helix-turn-helix domain of resolvase M483_411 PF02463 RecF/RecN/SMC N terminal domain M483_4110 PF00665 Integrase core domain M483_4110 PF02796 Helix-turn-helix domain of resolvase M483_4111 PF01695 IstB-like ATP binding protein M483_4117 PF00270 DEAD/DEAH box helicase M483_4117 PF00271 Helicase conserved C-terminal domain M483_4117 PF17191 RecG wedge domain M483_4118 PF17762 HTH domain found in ParB protein M483_4118 PF02195 ParB-like nuclease domain M483_4119 PF17762 HTH domain found in ParB protein M483_4119 PF02195 ParB-like nuclease domain M483_412 PF04355 SmpA / OmlA family M483_4120 PF00664 ABC transporter transmembrane region M483_4120 PF03412 Peptidase C39 family M483_4120 PF00005 ABC transporter M483_413 PF03658 RnfH family Ubiquitin M483_414 PF03364 Polyketide cyclase / dehydrase and lipid transport M483_4144 PF08400 Prophage tail fibre N-terminal M483_4144 PF07484 Phage Tail Collar Domain M483_4144 PF08400 Prophage tail fibre N-terminal M483_4144 PF03335 Phage tail fibre repeat M483_4144 PF07484 Phage Tail Collar Domain M483_4144 PF03335 Phage tail fibre repeat M483_4145 PF02413 Caudovirales tail fibre assembly protein, lambda gpK M483_4146 PF01695 IstB-like ATP binding protein M483_4147 PF00665 Integrase core domain M483_4147 PF02796 Helix-turn-helix domain of resolvase M483_4148 PF02195 ParB-like nuclease domain M483_4149 PF06006 Bacterial protein of unknown function (DUF905) M483_415 PF01668 SmpB protein M483_4152 PF07128 Protein of unknown function (DUF1380) M483_4154 PF01555 DNA methylase M483_4157 PF02195 ParB-like nuclease domain M483_4157 PF08775 ParB family M483_4159 PF18607 ParA helix turn helix domain M483_4159 PF13614 AAA domain M483_416 PF01797 Transposase IS200 like M483_4162 PF02796 Helix-turn-helix domain of resolvase M483_4162 PF00239 Resolvase, N terminal domain M483_4163 PF04754 Putative transposase, YhgA-like M483_4165 PF13091 PLD-like domain M483_4167 PF02371 Transposase IS116/IS110/IS902 family M483_4167 PF01548 Transposase M483_4169 PF02387 IncFII RepA protein family M483_417 PF00589 Phage integrase family M483_417 PF13356 Arm DNA-binding domain M483_4171 PF13462 Thioredoxin M483_4171 PF06965 Na+/H+ antiporter 1 M483_4173 PF05857 TraX protein M483_4174 PF18272 single-stranded DNA binding TraI N-terminal subdomain M483_4174 PF18340 DNA relaxase TraI 2B/2B-like domain M483_4174 PF07057 DNA helicase TraI M483_4174 PF08751 TrwC relaxase M483_4175 PF12615 F sex factor protein N terminal M483_4175 PF10412 Type IV secretion-system coupling protein DNA-binding domain M483_4176 PF00872 Transposase, Mutator family M483_4177 PF05513 TraA M483_4178 PF07178 TraL protein M483_4179 PF05309 TraE protein M483_4180 PF06586 TraK protein M483_4181 PF03743 Bacterial conjugation TrbI-like protein M483_4182 PF09676 Type IV conjugative transfer system lipoprotein (TraV) M483_4187 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer M483_4188 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) M483_4189 PF12477 Sex factor F TraW protein N terminal M483_4190 PF06834 TraU protein M483_4191 PF09673 Type-F conjugative transfer system pilin assembly protein M483_4192 PF06986 Type-1V conjugative transfer system mating pair stabilisation M483_4194 PF13728 F plasmid transfer operon protein M483_4195 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) M483_4196 PF13728 F plasmid transfer operon protein M483_4197 PF06122 Conjugative relaxosome accessory transposon protein M483_4198 PF07916 TraG-like protein, N-terminal region M483_4199 PF00872 Transposase, Mutator family M483_42 PF03212 Pertactin M483_42 PF03797 Autotransporter beta-domain M483_42 PF16168 Adhesin of bacterial autotransporter system, probable stalk M483_4200 PF00872 Transposase, Mutator family M483_4209 PF06445 GyrI-like small molecule binding domain M483_4209 PF12833 Helix-turn-helix domain M483_4210 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_4210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_4211 PF00577 Outer membrane usher protein M483_4211 PF13954 PapC N-terminal domain M483_4211 PF13953 PapC C-terminal domain M483_4212 PF09255 Caf1 Capsule antigen M483_4216 PF11775 Cobalamin biosynthesis protein CobT VWA domain M483_4216 PF06213 Cobalamin biosynthesis protein CobT M483_4218 PF14579 Helix-hairpin-helix motif M483_4218 PF02811 PHP domain M483_4218 PF07733 Bacterial DNA polymerase III alpha NTPase domain M483_4218 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M483_4224 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M483_4224 PF01367 5'-3' exonuclease, C-terminal SAM fold M483_4226 PF00154 recA bacterial DNA recombination protein M483_4234 PF01051 Initiator Replication protein M483_4242 PF01526 Tn3 transposase DDE domain M483_4242 PF13700 Domain of unknown function (DUF4158) M483_4243 PF00239 Resolvase, N terminal domain M483_4243 PF02796 Helix-turn-helix domain of resolvase M483_4246 PF01527 Transposase M483_4247 PF13683 Integrase core domain M483_4247 PF13276 HTH-like domain M483_4249 PF01695 IstB-like ATP binding protein M483_4250 PF00665 Integrase core domain M483_4251 PF13683 Integrase core domain M483_4251 PF13276 HTH-like domain M483_4252 PF05932 Tir chaperone protein (CesT) family M483_4253 PF03545 Yersinia virulence determinant (YopE) M483_4253 PF09020 YopE, N terminal M483_4255 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M483_4257 PF18090 Centromere-binding protein HTH domain M483_4257 PF02195 ParB-like nuclease domain M483_4258 PF13614 AAA domain M483_4260 PF13276 HTH-like domain M483_4260 PF00665 Integrase core domain M483_4260 PF13333 Integrase core domain M483_4262 PF05818 Enterobacterial TraT complement resistance protein M483_4264 PF03543 Yersinia/Haemophilus virulence surface antigen M483_4265 PF05932 Tir chaperone protein (CesT) family M483_4269 PF12468 Type III secretion system leucine rich repeat protein M483_427 PF05973 Phage derived protein Gp49-like (DUF891) M483_4271 PF00872 Transposase, Mutator family M483_4272 PF05844 YopD protein M483_4273 PF04888 Secretion system effector C (SseC) like family M483_4274 PF07720 Tetratricopeptide repeat M483_4275 PF04792 V antigen (LcrV) protein M483_4276 PF07216 LcrG protein M483_4277 PF09621 Type III secretion system regulator (LcrR) M483_4278 PF00771 FHIPEP family M483_4280 PF09474 Type III secretion system YscX (type_III_YscX) M483_4282 PF09059 TyeA M483_4283 PF07201 HrpJ-like domain M483_4284 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M483_4284 PF02874 ATP synthase alpha/beta family, beta-barrel domain M483_4284 PF18269 T3SS EscN ATPase C-terminal domain M483_4285 PF07321 Type III secretion protein YscO M483_4286 PF02120 Flagellar hook-length control protein FliK M483_4287 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M483_4288 PF00813 FliP family M483_4289 PF01313 Bacterial export proteins, family 3 M483_429 PF00665 Integrase core domain M483_429 PF02796 Helix-turn-helix domain of resolvase M483_4290 PF01311 Bacterial export proteins, family 1 M483_4291 PF01312 FlhB HrpN YscU SpaS Family M483_4293 PF02311 AraC-like ligand binding domain M483_4293 PF12833 Helix-turn-helix domain M483_4294 PF05932 Tir chaperone protein (CesT) family M483_4296 PF16693 Inner membrane component of T3SS, periplasmic domain M483_4296 PF16697 Inner membrane component of T3SS, cytoplasmic domain M483_4297 PF08988 Type III secretion system, cytoplasmic E component of needle M483_4298 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF M483_4299 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) M483_430 PF01695 IstB-like ATP binding protein M483_4300 PF09025 YopR, type III needle-polymerisation regulator M483_4301 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI M483_4302 PF01514 Secretory protein of YscJ/FliF family M483_4303 PF06578 YOP proteins translocation protein K (YscK) M483_4304 PF02108 Flagellar assembly protein FliH M483_4305 PF09013 YopH, N-terminal M483_4306 PF01527 Transposase M483_4308 PF00665 Integrase core domain M483_4308 PF02796 Helix-turn-helix domain of resolvase M483_4309 PF01695 IstB-like ATP binding protein M483_431 PF00589 Phage integrase family M483_431 PF13356 Arm DNA-binding domain M483_4310 PF13683 Integrase core domain M483_4310 PF13276 HTH-like domain M483_4311 PF09013 YopH, N-terminal M483_4311 PF00102 Protein-tyrosine phosphatase M483_4312 PF13276 HTH-like domain M483_4312 PF13683 Integrase core domain M483_4314 PF09632 Rac1-binding domain M483_4314 PF00069 Protein kinase domain M483_432 PF01527 Transposase M483_4320 PF02387 IncFII RepA protein family M483_4321 PF10723 Replication regulatory protein RepB M483_4325 PF18272 single-stranded DNA binding TraI N-terminal subdomain M483_4325 PF07057 DNA helicase TraI M483_4325 PF18340 DNA relaxase TraI 2B/2B-like domain M483_4325 PF08751 TrwC relaxase M483_4327 PF05662 Coiled stalk of trimeric autotransporter adhesin M483_4327 PF05658 Head domain of trimeric autotransporter adhesin M483_4327 PF03895 YadA-like membrane anchor domain M483_4329 PF03895 YadA-like membrane anchor domain M483_4329 PF05658 Head domain of trimeric autotransporter adhesin M483_4329 PF05662 Coiled stalk of trimeric autotransporter adhesin M483_434 PF12697 Alpha/beta hydrolase family M483_436 PF01402 Ribbon-helix-helix protein, copG family M483_437 PF00258 Flavodoxin M483_438 PF01475 Ferric uptake regulator family M483_439 PF02838 Glycosyl hydrolase family 20, domain 2 M483_439 PF03173 Putative carbohydrate binding domain M483_439 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M483_439 PF00728 Glycosyl hydrolase family 20, catalytic domain M483_44 PF07179 SseB protein N-terminal domain M483_44 PF14581 SseB protein C-terminal domain M483_440 PF03173 Putative carbohydrate binding domain M483_440 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M483_440 PF00728 Glycosyl hydrolase family 20, catalytic domain M483_440 PF02838 Glycosyl hydrolase family 20, domain 2 M483_441 PF03573 outer membrane porin, OprD family M483_442 PF00749 tRNA synthetases class I (E and Q), catalytic domain M483_442 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M483_443 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M483_443 PF00367 phosphotransferase system, EIIB M483_443 PF02378 Phosphotransferase system, EIIC M483_444 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M483_445 PF01979 Amidohydrolase family M483_446 PF01047 MarR family M483_446 PF00480 ROK family M483_447 PF13344 Haloacid dehalogenase-like hydrolase M483_448 PF13537 Glutamine amidotransferase domain M483_448 PF00733 Asparagine synthase M483_45 PF00883 Cytosol aminopeptidase family, catalytic domain M483_45 PF12404 Peptidase M483_455 PF01494 FAD binding domain M483_456 PF04055 Radical SAM superfamily M483_456 PF01938 TRAM domain M483_456 PF00919 Uncharacterized protein family UPF0004 M483_457 PF02562 PhoH-like protein M483_458 PF02130 Uncharacterized protein family UPF0054 M483_459 PF03471 Transporter associated domain M483_459 PF00571 CBS domain M483_46 PF04384 Iron-sulphur cluster assembly M483_460 PF00795 Carbon-nitrogen hydrolase M483_461 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_462 PF00528 Binding-protein-dependent transport system inner membrane component M483_463 PF00528 Binding-protein-dependent transport system inner membrane component M483_464 PF00005 ABC transporter M483_465 PF07295 Zinc-ribbon containing domain M483_466 PF00133 tRNA synthetases class I (I, L, M and V) M483_466 PF13603 Leucyl-tRNA synthetase, Domain 2 M483_466 PF08264 Anticodon-binding domain of tRNA M483_467 PF04390 Lipopolysaccharide-assembly M483_468 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M483_468 PF06144 DNA polymerase III, delta subunit M483_469 PF01467 Cytidylyltransferase-like M483_47 PF00111 2Fe-2S iron-sulfur cluster binding domain M483_471 PF02590 Predicted SPOUT methyltransferase M483_472 PF03717 Penicillin-binding Protein dimerisation domain M483_472 PF00905 Penicillin binding protein transpeptidase domain M483_473 PF01098 Cell cycle protein M483_474 PF03330 Lytic transglycolase M483_474 PF05036 Sporulation related domain M483_475 PF07943 Penicillin-binding protein 5, C-terminal domain M483_475 PF00768 D-alanyl-D-alanine carboxypeptidase M483_476 PF04359 Protein of unknown function (DUF493) M483_477 PF03099 Biotin/lipoate A/B protein ligase family M483_478 PF04055 Radical SAM superfamily M483_478 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M483_479 PF02416 mttA/Hcf106 family M483_48 PF00012 Hsp70 protein M483_480 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M483_481 PF00313 'Cold-shock' DNA-binding domain M483_482 PF00313 'Cold-shock' DNA-binding domain M483_483 PF00196 Bacterial regulatory proteins, luxR family M483_488 PF00664 ABC transporter transmembrane region M483_488 PF00005 ABC transporter M483_49 PF00226 DnaJ domain M483_49 PF07743 HSCB C-terminal oligomerisation domain M483_490 PF04962 KduI/IolB family M483_491 PF01261 Xylose isomerase-like TIM barrel M483_492 PF00294 pfkB family carbohydrate kinase M483_493 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M483_493 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_494 PF02653 Branched-chain amino acid transport system / permease component M483_495 PF00005 ABC transporter M483_496 PF13407 Periplasmic binding protein domain M483_497 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M483_497 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_498 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M483_498 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M483_499 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M483_499 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M483_499 PF00205 Thiamine pyrophosphate enzyme, central domain M483_5 PF00873 AcrB/AcrD/AcrF family M483_50 PF01521 Iron-sulphur cluster biosynthesis M483_500 PF00171 Aldehyde dehydrogenase family M483_505 PF00207 Alpha-2-macroglobulin family M483_505 PF07703 Alpha-2-macroglobulin bait region domain M483_505 PF11974 Bacterial alpha-2-macroglobulin MG3 domain M483_505 PF17962 Bacterial macroglobulin domain 6 M483_505 PF01835 MG2 domain M483_505 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain M483_505 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain M483_506 PF06832 Penicillin-Binding Protein C-terminus Family M483_506 PF00905 Penicillin binding protein transpeptidase domain M483_506 PF00912 Transglycosylase M483_507 PF13693 Winged helix-turn-helix DNA-binding M483_51 PF01592 NifU-like N terminal domain M483_511 PF05638 Type VI secretion system effector, Hcp M483_514 PF03212 Pertactin M483_514 PF03797 Autotransporter beta-domain M483_514 PF16168 Adhesin of bacterial autotransporter system, probable stalk M483_514 PF13018 Extended Signal Peptide of Type V secretion system M483_516 PF08007 Cupin superfamily protein M483_517 PF00872 Transposase, Mutator family M483_52 PF00266 Aminotransferase class-V M483_522 PF00248 Aldo/keto reductase family M483_523 PF00248 Aldo/keto reductase family M483_524 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_524 PF03466 LysR substrate binding domain M483_525 PF00665 Integrase core domain M483_525 PF02796 Helix-turn-helix domain of resolvase M483_526 PF01695 IstB-like ATP binding protein M483_529 PF00782 Dual specificity phosphatase, catalytic domain M483_53 PF02082 Transcriptional regulator M483_530 PF12146 Serine aminopeptidase, S33 M483_530 PF12147 Putative methyltransferase M483_531 PF01553 Acyltransferase M483_533 PF01066 CDP-alcohol phosphatidyltransferase M483_539 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M483_539 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M483_54 PF00588 SpoU rRNA Methylase family M483_541 PF01797 Transposase IS200 like M483_543 PF01406 tRNA synthetases class I (C) catalytic domain M483_543 PF09190 DALR domain M483_544 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M483_545 PF00149 Calcineurin-like phosphoesterase M483_546 PF00731 AIR carboxylase M483_547 PF02222 ATP-grasp domain M483_547 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M483_549 PF00005 ABC transporter M483_55 PF00459 Inositol monophosphatase family M483_550 PF13472 GDSL-like Lipase/Acylhydrolase family M483_551 PF00106 short chain dehydrogenase M483_552 PF00085 Thioredoxin M483_553 PF16200 C-terminal region of band_7 M483_553 PF01145 SPFH domain / Band 7 family M483_554 PF01957 NfeD-like C-terminal, partner-binding M483_555 PF13411 MerR HTH family regulatory protein M483_556 PF00403 Heavy-metal-associated domain M483_557 PF01963 TraB family M483_558 PF04073 Aminoacyl-tRNA editing domain M483_56 PF03824 High-affinity nickel-transport protein M483_561 PF00149 Calcineurin-like phosphoesterase M483_561 PF02872 5'-nucleotidase, C-terminal domain M483_562 PF00149 Calcineurin-like phosphoesterase M483_562 PF02872 5'-nucleotidase, C-terminal domain M483_563 PF00149 Calcineurin-like phosphoesterase M483_563 PF02872 5'-nucleotidase, C-terminal domain M483_564 PF07690 Major Facilitator Superfamily M483_565 PF07690 Major Facilitator Superfamily M483_566 PF00999 Sodium/hydrogen exchanger family M483_566 PF02254 TrkA-N domain M483_567 PF00294 pfkB family carbohydrate kinase M483_568 PF02706 Chain length determinant protein M483_569 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M483_569 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M483_569 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M483_569 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M483_57 PF06226 Protein of unknown function (DUF1007) M483_570 PF00535 Glycosyl transferase family 2 M483_571 PF00483 Nucleotidyl transferase M483_571 PF01050 Mannose-6-phosphate isomerase M483_572 PF01370 NAD dependent epimerase/dehydratase family M483_573 PF16363 GDP-mannose 4,6 dehydratase M483_574 PF16363 GDP-mannose 4,6 dehydratase M483_575 PF13439 Glycosyltransferase Family 4 M483_575 PF00534 Glycosyl transferases group 1 M483_58 PF12832 MFS_1 like family M483_582 PF01370 NAD dependent epimerase/dehydratase family M483_583 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M483_584 PF16363 GDP-mannose 4,6 dehydratase M483_585 PF00483 Nucleotidyl transferase M483_586 PF00175 Oxidoreductase NAD-binding domain M483_586 PF00970 Oxidoreductase FAD-binding domain M483_586 PF00111 2Fe-2S iron-sulfur cluster binding domain M483_587 PF00762 Ferrochelatase M483_588 PF05191 Adenylate kinase, active site lid M483_589 PF00183 Hsp90 protein M483_589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_59 PF00874 PRD domain M483_590 PF02132 RecR protein M483_590 PF13662 Toprim domain M483_591 PF02575 YbaB/EbfC DNA-binding family M483_592 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M483_592 PF12169 DNA polymerase III subunits gamma and tau domain III M483_592 PF12170 DNA polymerase III tau subunit V interacting with alpha M483_593 PF00156 Phosphoribosyl transferase domain M483_594 PF04304 Protein of unknown function (DUF454) M483_596 PF12794 Mechanosensitive ion channel inner membrane domain 1 M483_596 PF00924 Mechanosensitive ion channel M483_596 PF12795 Mechanosensitive ion channel porin domain M483_597 PF02635 DsrE/DsrF-like family M483_598 PF00440 Bacterial regulatory proteins, tetR family M483_598 PF08361 MAATS-type transcriptional repressor, C-terminal region M483_599 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_599 PF00529 HlyD membrane-fusion protein of T1SS M483_6 PF00873 AcrB/AcrD/AcrF family M483_60 PF13505 Outer membrane protein beta-barrel domain M483_600 PF00873 AcrB/AcrD/AcrF family M483_601 PF01197 Ribosomal protein L31 M483_602 PF00444 Ribosomal protein L36 M483_604 PF10757 Biofilm formation regulator YbaJ M483_605 PF05321 Haemolysin expression modulating protein M483_606 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M483_607 PF09619 Type III secretion system lipoprotein chaperone (YscW) M483_609 PF00909 Ammonium Transporter Family M483_61 PF00464 Serine hydroxymethyltransferase M483_610 PF00543 Nitrogen regulatory protein P-II M483_611 PF00664 ABC transporter transmembrane region M483_611 PF00005 ABC transporter M483_612 PF00664 ABC transporter transmembrane region M483_612 PF00005 ABC transporter M483_613 PF01037 Lrp/AsnC ligand binding domain M483_613 PF13404 AsnC-type helix-turn-helix domain M483_614 PF00291 Pyridoxal-phosphate dependent enzyme M483_616 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M483_616 PF12793 Sugar transport-related sRNA regulator N-term M483_617 PF06508 Queuosine biosynthesis protein QueC M483_62 PF00042 Globin M483_62 PF00970 Oxidoreductase FAD-binding domain M483_62 PF00175 Oxidoreductase NAD-binding domain M483_620 PF13145 PPIC-type PPIASE domain M483_621 PF01797 Transposase IS200 like M483_623 PF00216 Bacterial DNA-binding protein M483_624 PF00004 ATPase family associated with various cellular activities (AAA) M483_624 PF02190 ATP-dependent protease La (LON) substrate-binding domain M483_624 PF05362 Lon protease (S16) C-terminal proteolytic domain M483_625 PF07724 AAA domain (Cdc48 subfamily) M483_625 PF06689 ClpX C4-type zinc finger M483_625 PF10431 C-terminal, D2-small domain, of ClpB protein M483_626 PF00574 Clp protease M483_627 PF05698 Bacterial trigger factor protein (TF) C-terminus M483_627 PF05697 Bacterial trigger factor protein (TF) M483_627 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M483_629 PF01722 BolA-like protein M483_63 PF00665 Integrase core domain M483_63 PF02796 Helix-turn-helix domain of resolvase M483_630 PF03923 Uncharacterized lipoprotein M483_630 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M483_631 PF07690 Major Facilitator Superfamily M483_632 PF03502 Nucleoside-specific channel-forming protein, Tsx M483_633 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M483_633 PF06481 COX Aromatic Rich Motif M483_634 PF00115 Cytochrome C and Quinol oxidase polypeptide I M483_635 PF00510 Cytochrome c oxidase subunit III M483_636 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M483_637 PF01040 UbiA prenyltransferase family M483_638 PF07690 Major Facilitator Superfamily M483_639 PF04461 Protein of unknown function (DUF520) M483_640 PF02558 Ketopantoate reductase PanE/ApbA M483_640 PF08546 Ketopantoate reductase PanE/ApbA C terminal M483_641 PF01965 DJ-1/PfpI family M483_642 PF02568 Thiamine biosynthesis protein (ThiI) M483_642 PF02926 THUMP domain M483_643 PF02609 Exonuclease VII small subunit M483_644 PF00348 Polyprenyl synthetase M483_645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M483_645 PF02780 Transketolase, C-terminal domain M483_645 PF02779 Transketolase, pyrimidine binding domain M483_646 PF01797 Transposase IS200 like M483_647 PF04608 Phosphatidylglycerophosphatase A M483_648 PF00586 AIR synthase related protein, N-terminal domain M483_648 PF02769 AIR synthase related protein, C-terminal domain M483_649 PF01029 NusB family M483_65 PF01695 IstB-like ATP binding protein M483_650 PF00885 6,7-dimethyl-8-ribityllumazine synthase M483_651 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M483_651 PF01872 RibD C-terminal domain M483_652 PF03477 ATP cone domain M483_655 PF01797 Transposase IS200 like M483_656 PF07549 SecD/SecF GG Motif M483_656 PF02355 Protein export membrane protein M483_657 PF07549 SecD/SecF GG Motif M483_657 PF02355 Protein export membrane protein M483_657 PF13721 SecD export protein N-terminal TM region M483_658 PF02699 Preprotein translocase subunit M483_659 PF01702 Queuine tRNA-ribosyltransferase M483_66 PF14502 Helix-turn-helix domain M483_66 PF14503 YhfZ C-terminal domain M483_660 PF02547 Queuosine biosynthesis protein M483_661 PF04336 Acyl carrier protein phosphodiesterase M483_662 PF10417 C-terminal domain of 1-Cys peroxiredoxin M483_662 PF00578 AhpC/TSA family M483_666 PF00128 Alpha amylase, catalytic domain M483_666 PF02903 Alpha amylase, N-terminal ig-like domain M483_667 PF00324 Amino acid permease M483_668 PF05525 Branched-chain amino acid transport protein M483_669 PF12849 PBP superfamily domain M483_67 PF00543 Nitrogen regulatory protein P-II M483_670 PF00512 His Kinase A (phospho-acceptor) domain M483_670 PF00989 PAS fold M483_670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_670 PF11808 Phosphate regulon sensor protein PhoR M483_671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_671 PF00512 His Kinase A (phospho-acceptor) domain M483_671 PF00989 PAS fold M483_671 PF11808 Phosphate regulon sensor protein PhoR M483_672 PF00486 Transcriptional regulatory protein, C terminal M483_672 PF00072 Response regulator receiver domain M483_673 PF00149 Calcineurin-like phosphoesterase M483_673 PF12320 Type 5 capsule protein repressor C-terminal domain M483_674 PF13476 AAA domain M483_675 PF00480 ROK family M483_676 PF04381 Putative exonuclease, RdgC M483_677 PF06865 Pyrimidine/purine nucleoside phosphorylase M483_678 PF01202 Shikimate kinase M483_68 PF00795 Carbon-nitrogen hydrolase M483_68 PF02540 NAD synthase M483_680 PF08241 Methyltransferase domain M483_682 PF07317 Flagellar regulator YcgR M483_682 PF07238 PilZ domain M483_683 PF00171 Aldehyde dehydrogenase family M483_684 PF01472 PUA domain M483_684 PF00696 Amino acid kinase family M483_685 PF07417 Sigma factor-binding transcriptional regulator Crl M483_687 PF00156 Phosphoribosyl transferase domain M483_69 PF00072 Response regulator receiver domain M483_69 PF00158 Sigma-54 interaction domain M483_691 PF07687 Peptidase dimerisation domain M483_691 PF01546 Peptidase family M20/M25/M40 M483_692 PF00817 impB/mucB/samB family M483_692 PF11799 impB/mucB/samB family C-terminal domain M483_692 PF11798 IMS family HHH motif M483_693 PF03009 Glycerophosphoryl diester phosphodiesterase family M483_695 PF02424 ApbE family M483_696 PF00111 2Fe-2S iron-sulfur cluster binding domain M483_696 PF00970 Oxidoreductase FAD-binding domain M483_696 PF00175 Oxidoreductase NAD-binding domain M483_697 PF02508 Rnf-Nqr subunit, membrane protein M483_698 PF02508 Rnf-Nqr subunit, membrane protein M483_699 PF04205 FMN-binding domain M483_7 PF07690 Major Facilitator Superfamily M483_70 PF13942 YfhG lipoprotein M483_700 PF03116 NQR2, RnfD, RnfE family M483_701 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) M483_701 PF11973 NQRA C-terminal domain M483_702 PF13230 Glutamine amidotransferases class-II M483_703 PF03734 L,D-transpeptidase catalytic domain M483_704 PF13580 SIS domain M483_705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M483_705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M483_705 PF09317 Domain of unknown function (DUF1974) M483_706 PF01797 Transposase IS200 like M483_708 PF18071 HMW1C N-terminal M483_708 PF18254 HMW1 domain 2 M483_709 PF05860 haemagglutination activity domain M483_71 PF00512 His Kinase A (phospho-acceptor) domain M483_71 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M483_710 PF08479 POTRA domain, ShlB-type M483_711 PF01636 Phosphotransferase enzyme family M483_712 PF01008 Initiation factor 2 subunit family M483_713 PF03079 ARD/ARD' family M483_715 PF00596 Class II Aldolase and Adducin N-terminal domain M483_716 PF00155 Aminotransferase class I and II M483_717 PF00795 Carbon-nitrogen hydrolase M483_718 PF07687 Peptidase dimerisation domain M483_718 PF01546 Peptidase family M20/M25/M40 M483_719 PF00266 Aminotransferase class-V M483_72 PF01797 Transposase IS200 like M483_720 PF02796 Helix-turn-helix domain of resolvase M483_720 PF00665 Integrase core domain M483_721 PF01695 IstB-like ATP binding protein M483_722 PF00266 Aminotransferase class-V M483_723 PF00005 ABC transporter M483_725 PF00528 Binding-protein-dependent transport system inner membrane component M483_726 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_729 PF01425 Amidase M483_731 PF07690 Major Facilitator Superfamily M483_732 PF03591 AzlC protein M483_733 PF05437 Branched-chain amino acid transport protein (AzlD) M483_734 PF01047 MarR family M483_735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M483_735 PF00529 HlyD membrane-fusion protein of T1SS M483_736 PF07690 Major Facilitator Superfamily M483_737 PF00588 SpoU rRNA Methylase family M483_737 PF08032 RNA 2'-O ribose methyltransferase substrate binding M483_738 PF00085 Thioredoxin M483_740 PF13607 Succinyl-CoA ligase like flavodoxin domain M483_740 PF13380 CoA binding domain M483_740 PF00583 Acetyltransferase (GNAT) family M483_741 PF13091 PLD-like domain M483_742 PF10043 Predicted periplasmic lipoprotein (DUF2279) M483_747 PF01177 Asp/Glu/Hydantoin racemase M483_748 PF07715 TonB-dependent Receptor Plug Domain M483_748 PF00593 TonB dependent receptor M483_749 PF05958 tRNA (Uracil-5-)-methyltransferase M483_750 PF07226 Protein of unknown function (DUF1422) M483_751 PF00440 Bacterial regulatory proteins, tetR family M483_752 PF03466 LysR substrate binding domain M483_752 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_753 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M483_753 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_754 PF08534 Redoxin M483_754 PF00462 Glutaredoxin M483_755 PF07992 Pyridine nucleotide-disulphide oxidoreductase M483_755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M483_756 PF03544 Gram-negative bacterial TonB protein C-terminal M483_757 PF00529 HlyD membrane-fusion protein of T1SS M483_758 PF00005 ABC transporter M483_758 PF00664 ABC transporter transmembrane region M483_76 PF02769 AIR synthase related protein, C-terminal domain M483_76 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M483_76 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M483_760 PF07715 TonB-dependent Receptor Plug Domain M483_760 PF00593 TonB dependent receptor M483_762 PF00206 Lyase M483_762 PF14698 Argininosuccinate lyase C-terminal M483_763 PF00696 Amino acid kinase family M483_764 PF01118 Semialdehyde dehydrogenase, NAD binding domain M483_764 PF02774 Semialdehyde dehydrogenase, dimerisation domain M483_765 PF07687 Peptidase dimerisation domain M483_765 PF01546 Peptidase family M20/M25/M40 M483_766 PF00311 Phosphoenolpyruvate carboxylase M483_768 PF13276 HTH-like domain M483_768 PF13333 Integrase core domain M483_768 PF00665 Integrase core domain M483_769 PF00312 Ribosomal protein S15 M483_77 PF00497 Bacterial extracellular solute-binding proteins, family 3 M483_77 PF01464 Transglycosylase SLT domain M483_770 PF09157 Pseudouridine synthase II TruB, C-terminal M483_770 PF16198 tRNA pseudouridylate synthase B C-terminal domain M483_770 PF01509 TruB family pseudouridylate synthase (N terminal domain) M483_771 PF02033 Ribosome-binding factor A M483_772 PF11987 Translation-initiation factor 2 M483_772 PF03144 Elongation factor Tu domain 2 M483_772 PF00009 Elongation factor Tu GTP binding domain M483_772 PF08364 Bacterial translation initiation factor IF-2 associated region M483_772 PF04760 Translation initiation factor IF-2, N-terminal region M483_773 PF08529 NusA N-terminal domain M483_773 PF13184 NusA-like KH domain M483_773 PF00575 S1 RNA binding domain M483_774 PF17384 RimP C-terminal SH3 domain M483_774 PF02576 RimP N-terminal domain M483_777 PF03840 Preprotein translocase SecG subunit M483_778 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M483_778 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M483_778 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M483_778 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M483_779 PF00809 Pterin binding enzyme M483_78 PF14437 MafB19-like deaminase M483_780 PF17862 AAA+ lid domain M483_780 PF06480 FtsH Extracellular M483_780 PF01434 Peptidase family M41 M483_780 PF00004 ATPase family associated with various cellular activities (AAA) M483_781 PF01728 FtsJ-like methyltransferase M483_782 PF01985 CRS1 / YhbY (CRM) domain M483_783 PF01272 Transcription elongation factor, GreA/GreB, C-term M483_783 PF03449 Transcription elongation factor, N-terminal M483_784 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M483_785 PF00072 Response regulator receiver domain M483_785 PF00486 Transcriptional regulatory protein, C terminal M483_786 PF00512 His Kinase A (phospho-acceptor) domain M483_786 PF00672 HAMP domain M483_786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_787 PF01926 50S ribosome-binding GTPase M483_787 PF01018 GTP1/OBG M483_788 PF00892 EamA-like transporter family M483_789 PF01016 Ribosomal L27 protein M483_790 PF00829 Ribosomal prokaryotic L21 protein M483_791 PF00348 Polyprenyl synthetase M483_793 PF13693 Winged helix-turn-helix DNA-binding M483_794 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M483_794 PF00056 lactate/malate dehydrogenase, NAD binding domain M483_795 PF02863 Arginine repressor, C-terminal domain M483_795 PF01316 Arginine repressor, DNA binding domain M483_797 PF01225 Mur ligase family, catalytic domain M483_797 PF08245 Mur ligase middle domain M483_797 PF02875 Mur ligase family, glutamate ligase domain M483_798 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M483_799 PF00719 Inorganic pyrophosphatase M483_8 PF00672 HAMP domain M483_8 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M483_8 PF00512 His Kinase A (phospho-acceptor) domain M483_80 PF01380 SIS domain M483_800 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like M483_801 PF04357 TamB, inner membrane protein subunit of TAM complex M483_802 PF07244 Surface antigen variable number repeat M483_802 PF01103 Surface antigen M483_802 PF17243 POTRA domain TamA domain 1 M483_803 PF01625 Peptide methionine sulfoxide reductase M483_804 PF01595 Cyclin M transmembrane N-terminal domain M483_804 PF00571 CBS domain M483_804 PF03471 Transporter associated domain M483_805 PF06526 Protein of unknown function (DUF1107) M483_806 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M483_807 PF00459 Inositol monophosphatase family M483_808 PF02872 5'-nucleotidase, C-terminal domain M483_808 PF00149 Calcineurin-like phosphoesterase M483_809 PF04405 Domain of Unknown function (DUF542) M483_809 PF01814 Hemerythrin HHE cation binding domain M483_81 PF01418 Helix-turn-helix domain, rpiR family M483_81 PF01380 SIS domain M483_810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M483_810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M483_811 PF04225 Opacity-associated protein A LysM-like domain M483_811 PF08525 Opacity-associated protein A N-terminal motif M483_813 PF01797 Transposase IS200 like M483_814 PF01281 Ribosomal protein L9, N-terminal domain M483_814 PF03948 Ribosomal protein L9, C-terminal domain M483_815 PF01084 Ribosomal protein S18 M483_816 PF01250 Ribosomal protein S6 M483_818 PF00326 Prolyl oligopeptidase family M483_819 PF01695 IstB-like ATP binding protein M483_82 PF12838 4Fe-4S dicluster domain M483_820 PF02796 Helix-turn-helix domain of resolvase M483_820 PF00665 Integrase core domain M483_821 PF13673 Acetyltransferase (GNAT) domain M483_822 PF00485 Phosphoribulokinase / Uridine kinase family M483_823 PF08279 HTH domain M483_823 PF03099 Biotin/lipoate A/B protein ligase family M483_823 PF02237 Biotin protein ligase C terminal domain M483_824 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M483_824 PF01565 FAD binding domain M483_829 PF12724 Flavodoxin domain M483_83 PF01797 Transposase IS200 like M483_830 PF02386 Cation transport protein M483_831 PF09186 Domain of unknown function (DUF1949) M483_831 PF01205 Uncharacterized protein family UPF0029 M483_832 PF00557 Metallopeptidase family M24 M483_833 PF00378 Enoyl-CoA hydratase/isomerase M483_833 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M483_833 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M483_834 PF02803 Thiolase, C-terminal domain M483_834 PF00108 Thiolase, N-terminal domain M483_835 PF00970 Oxidoreductase FAD-binding domain M483_835 PF00175 Oxidoreductase NAD-binding domain M483_836 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M483_837 PF02357 Transcription termination factor nusG M483_838 PF00490 Delta-aminolevulinic acid dehydratase M483_839 PF01026 TatD related DNase M483_84 PF03886 ABC-type transport auxiliary lipoprotein component M483_840 PF00902 Sec-independent protein translocase protein (TatC) M483_842 PF02416 mttA/Hcf106 family M483_843 PF03109 ABC1 family M483_844 PF02036 SCP-2 sterol transfer family M483_845 PF01209 ubiE/COQ5 methyltransferase family M483_846 PF02646 RmuC family M483_847 PF09335 SNARE associated Golgi protein M483_848 PF02554 Carbon starvation protein CstA M483_848 PF13722 5TM C-terminal transporter carbon starvation CstA M483_85 PF02470 MlaD protein M483_850 PF01048 Phosphorylase superfamily M483_851 PF01738 Dienelactone hydrolase family M483_852 PF08267 Cobalamin-independent synthase, N-terminal domain M483_852 PF01717 Cobalamin-independent synthase, Catalytic domain M483_853 PF00892 EamA-like transporter family M483_854 PF03466 LysR substrate binding domain M483_854 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_855 PF03547 Membrane transport protein M483_856 PF03009 Glycerophosphoryl diester phosphodiesterase family M483_857 PF17912 MalK OB fold domain M483_857 PF00005 ABC transporter M483_858 PF00528 Binding-protein-dependent transport system inner membrane component M483_859 PF00528 Binding-protein-dependent transport system inner membrane component M483_86 PF04403 Paraquat-inducible protein A M483_860 PF13416 Bacterial extracellular solute-binding protein M483_868 PF00005 ABC transporter M483_869 PF12399 Branched-chain amino acid ATP-binding cassette transporter M483_869 PF00005 ABC transporter M483_87 PF12848 ABC transporter M483_87 PF16326 ABC transporter C-terminal domain M483_87 PF00005 ABC transporter M483_870 PF02653 Branched-chain amino acid transport system / permease component M483_870 PF11862 Domain of unknown function (DUF3382) M483_871 PF02653 Branched-chain amino acid transport system / permease component M483_872 PF13458 Periplasmic binding protein M483_873 PF12568 Acetyltransferase (GNAT) domain, PanZ M483_874 PF01797 Transposase IS200 like M483_875 PF00140 Sigma-70 factor, region 1.2 M483_875 PF04542 Sigma-70 region 2 M483_875 PF04545 Sigma-70, region 4 M483_876 PF02687 FtsX-like permease family M483_876 PF18075 FtsX extracellular domain M483_877 PF00005 ABC transporter M483_878 PF00448 SRP54-type protein, GTPase domain M483_878 PF02881 SRP54-type protein, helical bundle domain M483_878 PF00448 SRP54-type protein, GTPase domain M483_878 PF02881 SRP54-type protein, helical bundle domain M483_88 PF01170 Putative RNA methylase family UPF0020 M483_88 PF10672 S-adenosylmethionine-dependent methyltransferase M483_88 PF02926 THUMP domain M483_880 PF06611 Protein of unknown function (DUF1145) M483_883 PF07947 YhhN family M483_884 PF00403 Heavy-metal-associated domain M483_885 PF01206 Sulfurtransferase TusA M483_886 PF02592 Putative vitamin uptake transporter M483_887 PF08786 DcrB M483_888 PF02754 Cysteine-rich domain M483_888 PF13183 4Fe-4S dicluster domain M483_889 PF00890 FAD binding domain M483_89 PF03476 MOSC N-terminal beta barrel domain M483_89 PF00111 2Fe-2S iron-sulfur cluster binding domain M483_89 PF03473 MOSC domain M483_890 PF04324 BFD-like [2Fe-2S] binding domain M483_890 PF01266 FAD dependent oxidoreductase M483_891 PF03009 Glycerophosphoryl diester phosphodiesterase family M483_894 PF12146 Serine aminopeptidase, S33 M483_895 PF01810 LysE type translocator M483_896 PF01810 LysE type translocator M483_897 PF09382 RQC domain M483_897 PF00270 DEAD/DEAH box helicase M483_897 PF16124 RecQ zinc-binding M483_897 PF00570 HRDC domain M483_897 PF00271 Helicase conserved C-terminal domain M483_898 PF02253 Phospholipase A1 M483_899 PF03061 Thioesterase superfamily M483_9 PF00486 Transcriptional regulatory protein, C terminal M483_9 PF00072 Response regulator receiver domain M483_90 PF07126 Cell-division protein ZapC M483_900 PF00892 EamA-like transporter family M483_901 PF01544 CorA-like Mg2+ transporter protein M483_902 PF09370 Phosphoenolpyruvate hydrolase-like M483_905 PF13361 UvrD-like helicase C-terminal domain M483_905 PF00580 UvrD/REP helicase N-terminal domain M483_906 PF13419 Haloacid dehalogenase-like hydrolase M483_907 PF02899 Phage integrase, N-terminal SAM-like domain M483_907 PF00589 Phage integrase family M483_908 PF04340 Protein of unknown function, DUF484 M483_909 PF01678 Diaminopimelate epimerase M483_91 PF01180 Dihydroorotate dehydrogenase M483_910 PF13627 Prokaryotic lipoprotein-attachment site M483_911 PF01491 Frataxin-like domain M483_912 PF01295 Adenylate cyclase, class-I M483_912 PF12633 Adenylate cyclase NT domain M483_913 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M483_913 PF03900 Porphobilinogen deaminase, C-terminal domain M483_914 PF02602 Uroporphyrinogen-III synthase HemD M483_915 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M483_916 PF07719 Tetratricopeptide repeat M483_916 PF07219 HemY protein N-terminus M483_917 PF01797 Transposase IS200 like M483_92 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M483_92 PF11940 Domain of unknown function (DUF3458) Ig-like fold M483_92 PF01433 Peptidase family M1 domain M483_923 PF00324 Amino acid permease M483_924 PF03808 Glycosyl transferase WecB/TagA/CpsF family M483_925 PF06899 WzyE protein, O-antigen assembly polymerase M483_926 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 M483_927 PF01943 Polysaccharide biosynthesis protein M483_928 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M483_93 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M483_93 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M483_930 PF00483 Nucleotidyl transferase M483_931 PF16363 GDP-mannose 4,6 dehydratase M483_932 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M483_932 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M483_932 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M483_933 PF02350 UDP-N-acetylglucosamine 2-epimerase M483_934 PF02706 Chain length determinant protein M483_935 PF00953 Glycosyl transferase family 4 M483_936 PF07498 Rho termination factor, N-terminal domain M483_936 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M483_936 PF07497 Rho termination factor, RNA-binding domain M483_937 PF00085 Thioredoxin M483_938 PF00270 DEAD/DEAH box helicase M483_938 PF00271 Helicase conserved C-terminal domain M483_939 PF02541 Ppx/GppA phosphatase family M483_94 PF01336 OB-fold nucleic acid binding domain M483_94 PF00152 tRNA synthetases class II (D, K and N) M483_940 PF13361 UvrD-like helicase C-terminal domain M483_940 PF00580 UvrD/REP helicase N-terminal domain M483_944 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_944 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_945 PF13953 PapC C-terminal domain M483_945 PF13954 PapC N-terminal domain M483_945 PF00577 Outer membrane usher protein M483_947 PF02753 Pili assembly chaperone PapD, C-terminal domain M483_947 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M483_948 PF01320 Colicin immunity protein / pyocin immunity protein M483_95 PF00267 Gram-negative porin M483_953 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M483_953 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M483_954 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_954 PF03466 LysR substrate binding domain M483_96 PF00155 Aminotransferase class I and II M483_960 PF00585 C-terminal regulatory domain of Threonine dehydratase M483_960 PF00291 Pyridoxal-phosphate dependent enzyme M483_961 PF00920 Dehydratase family M483_962 PF01063 Amino-transferase class IV M483_964 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M483_964 PF00205 Thiamine pyrophosphate enzyme, central domain M483_964 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M483_965 PF13335 Magnesium chelatase, subunit ChlI C-terminal M483_965 PF01078 Magnesium chelatase, subunit ChlI M483_966 PF04219 Protein of unknown function, DUF M483_967 PF02653 Branched-chain amino acid transport system / permease component M483_968 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M483_968 PF03466 LysR substrate binding domain M483_969 PF02653 Branched-chain amino acid transport system / permease component M483_97 PF00753 Metallo-beta-lactamase superfamily M483_970 PF00005 ABC transporter M483_971 PF13407 Periplasmic binding protein domain M483_98 PF05951 Bacterial protein of unknown function (DUF882) M483_980 PF02142 MGS-like domain M483_980 PF01808 AICARFT/IMPCHase bienzyme M483_981 PF02843 Phosphoribosylglycinamide synthetase, C domain M483_981 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M483_981 PF02844 Phosphoribosylglycinamide synthetase, N domain M483_982 PF07356 Protein of unknown function (DUF1481) M483_983 PF00216 Bacterial DNA-binding protein M483_984 PF04222 Protein of unknown function (DUF416) M483_985 PF04493 Endonuclease V M483_986 PF01208 Uroporphyrinogen decarboxylase (URO-D) M483_988 PF00293 NUDIX domain M483_988 PF09297 NADH pyrophosphatase zinc ribbon domain M483_989 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M483_99 PF03734 L,D-transpeptidase catalytic domain M483_99 PF01471 Putative peptidoglycan binding domain M483_990 PF01964 Radical SAM ThiC family M483_990 PF13667 ThiC-associated domain M483_991 PF02581 Thiamine monophosphate synthase M483_992 PF00899 ThiF family M483_994 PF05690 Thiazole biosynthesis protein ThiG M483_995 PF05690 Thiazole biosynthesis protein ThiG M483_996 PF04055 Radical SAM superfamily M483_996 PF06968 Biotin and Thiamin Synthesis associated domain M483_997 PF04055 Radical SAM superfamily M483_997 PF06968 Biotin and Thiamin Synthesis associated domain M483_998 PF00623 RNA polymerase Rpb1, domain 2 M483_998 PF05000 RNA polymerase Rpb1, domain 4 M483_998 PF04983 RNA polymerase Rpb1, domain 3 M483_998 PF04997 RNA polymerase Rpb1, domain 1 M483_998 PF04998 RNA polymerase Rpb1, domain 5 M483_999 PF04560 RNA polymerase Rpb2, domain 7 M483_999 PF10385 RNA polymerase beta subunit external 1 domain M483_999 PF04565 RNA polymerase Rpb2, domain 3 M483_999 PF04561 RNA polymerase Rpb2, domain 2 M483_999 PF04563 RNA polymerase beta subunit M483_999 PF00562 RNA polymerase Rpb2, domain 6