A1122_00020 SM01006 Siderophore biosynthesis protein domain A1122_00055 SM00421 helix_turn_helix, Lux Regulon A1122_00120 SM00382 ATPases associated with a variety of cellular activities A1122_00120 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_00205 SM00382 ATPases associated with a variety of cellular activities A1122_00240 SM00478 endonuclease III A1122_00240 SM00525 A1122_00240 A1122_00275 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_00285 SM01152 A1122_00285 A1122_00305 SM00382 ATPases associated with a variety of cellular activities A1122_00320 SM00732 Likely ribonuclease with RNase H fold. A1122_00345 SM00731 SprT homologues. A1122_00375 SM00861 Transketolase, pyrimidine binding domain A1122_00380 SM01321 A1122_00380 A1122_00390 SM00382 ATPases associated with a variety of cellular activities A1122_00395 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1122_00465 SM01011 Aminopeptidase P, N-terminal domain A1122_00545 SM00448 cheY-homologous receiver domain A1122_00545 SM00862 Transcriptional regulatory protein, C terminal A1122_00550 SM00387 Histidine kinase-like ATPases A1122_00550 SM00388 His Kinase A (phosphoacceptor) domain A1122_00580 SM00937 A1122_00580 A1122_00615 SM00530 Helix-turn-helix XRE-family like proteins A1122_00625 SM00530 Helix-turn-helix XRE-family like proteins A1122_00630 SM00778 Zinc-binding domain of primase-helicase A1122_00630 SM00885 D5 N terminal like A1122_00745 SM00382 ATPases associated with a variety of cellular activities A1122_00750 SM00382 ATPases associated with a variety of cellular activities A1122_00790 SM00354 helix_turn _helix lactose operon repressor A1122_00810 SM00354 helix_turn _helix lactose operon repressor A1122_00885 SM00420 helix_turn_helix, Deoxyribose operon repressor A1122_00885 SM01134 A1122_00885 A1122_00905 SM01321 A1122_00905 A1122_00915 SM00382 ATPases associated with a variety of cellular activities A1122_00925 SM00869 Autotransporter beta-domain A1122_00940 SM00947 Carbonic anhydrase A1122_00960 SM00382 ATPases associated with a variety of cellular activities A1122_01020 SM00862 Transcriptional regulatory protein, C terminal A1122_01030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1122_01030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_01030 SM00319 Homologues of the ligand binding domain of Tar A1122_01040 SM00849 Metallo-beta-lactamase superfamily A1122_01065 SM00354 helix_turn _helix lactose operon repressor A1122_01075 SM00563 Phosphate acyltransferases A1122_01100 SM00927 DNA mismatch repair enzyme MutH A1122_01110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A1122_01135 SM00382 ATPases associated with a variety of cellular activities A1122_01185 SM00382 ATPases associated with a variety of cellular activities A1122_01190 SM00382 ATPases associated with a variety of cellular activities A1122_01215 SM00869 Autotransporter beta-domain A1122_01255 SM00354 helix_turn _helix lactose operon repressor A1122_01370 SM00862 Transcriptional regulatory protein, C terminal A1122_01420 SM01321 A1122_01420 A1122_01450 SM00858 A1122_01450 A1122_01470 SM00382 ATPases associated with a variety of cellular activities A1122_01495 SM00382 ATPases associated with a variety of cellular activities A1122_01570 SM01321 A1122_01570 A1122_01580 SM01321 A1122_01580 A1122_01670 SM00342 helix_turn_helix, arabinose operon control protein A1122_01705 SM00563 Phosphate acyltransferases A1122_01710 SM00434 DNA Topoisomerase IV A1122_01725 SM00387 Histidine kinase-like ATPases A1122_01725 SM00433 TopoisomeraseII A1122_01815 SM01118 A1122_01815 A1122_01820 SM00287 Bacterial SH3 domain homologues A1122_01825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1122_01835 SM00905 Dihydroneopterin aldolase A1122_01840 SM01207 A1122_01840 A1122_01860 SM00400 zinc finger A1122_01860 SM00493 A1122_01860 A1122_01860 SM00766 DNA primase DnaG DnaB-binding A1122_01895 SM00382 ATPases associated with a variety of cellular activities A1122_01995 SM01217 A1122_01995 A1122_02020 SM00354 helix_turn _helix lactose operon repressor A1122_02030 SM00382 ATPases associated with a variety of cellular activities A1122_02045 SM00869 Autotransporter beta-domain A1122_02080 SM00912 haemagglutination activity domain A1122_02090 SM00327 von Willebrand factor (vWF) type A domain A1122_02100 SM00327 von Willebrand factor (vWF) type A domain A1122_02105 SM00327 von Willebrand factor (vWF) type A domain A1122_02115 SM00220 Serine/Threonine protein kinases, catalytic domain A1122_02135 SM00869 Autotransporter beta-domain A1122_02155 SM01321 A1122_02155 A1122_02165 SM00858 A1122_02165 A1122_02185 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_02185 SM00895 A1122_02185 A1122_02240 SM00382 ATPases associated with a variety of cellular activities A1122_02260 SM00957 SecA DEAD-like domain A1122_02260 SM00958 SecA preprotein cross-linking domain A1122_02280 SM00864 Tubulin/FtsZ family, GTPase domain A1122_02280 SM00865 Tubulin/FtsZ family, C-terminal domain A1122_02285 SM00842 Cell division protein FtsA A1122_02365 SM00354 helix_turn _helix lactose operon repressor A1122_02370 SM01321 A1122_02370 A1122_02405 SM01321 A1122_02405 A1122_02410 SM00917 LeuA allosteric (dimerisation) domain A1122_02415 SM01329 A1122_02415 A1122_02440 SM00382 ATPases associated with a variety of cellular activities A1122_02470 SM00382 ATPases associated with a variety of cellular activities A1122_02480 SM00486 DNA polymerase type-B family A1122_02485 SM00487 DEAD-like helicases superfamily A1122_02485 SM00490 helicase superfamily c-terminal domain A1122_02555 SM00382 ATPases associated with a variety of cellular activities A1122_02555 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_02605 SM00271 DnaJ molecular chaperone homology domain A1122_02625 SM00650 Ribosomal RNA adenine dimethylases A1122_02650 SM01321 A1122_02650 A1122_02675 SM00851 MGS-like domain A1122_02675 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A1122_02680 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A1122_02690 SM01321 A1122_02690 A1122_02715 SM00904 Riboflavin kinase A1122_02735 SM00271 DnaJ molecular chaperone homology domain A1122_02760 SM00852 Probable molybdopterin binding domain A1122_02790 SM00448 cheY-homologous receiver domain A1122_02790 SM00862 Transcriptional regulatory protein, C terminal A1122_02800 SM00342 helix_turn_helix, arabinose operon control protein A1122_02800 SM00871 Bacterial transcription activator, effector binding domain A1122_02805 SM00855 Phosphoglycerate mutase family A1122_02825 SM00831 Cation transporter/ATPase, N-terminus A1122_02835 SM00267 diguanylate cyclase A1122_02850 SM00382 ATPases associated with a variety of cellular activities A1122_02860 SM00530 Helix-turn-helix XRE-family like proteins A1122_02865 SM00382 ATPases associated with a variety of cellular activities A1122_02890 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A1122_02895 SM00382 ATPases associated with a variety of cellular activities A1122_02910 SM01133 A1122_02910 A1122_02940 SM00749 bacterial OsmY and nodulation domain A1122_02975 SM00267 diguanylate cyclase A1122_03040 SM00382 ATPases associated with a variety of cellular activities A1122_03060 SM01133 A1122_03060 A1122_03100 SM00342 helix_turn_helix, arabinose operon control protein A1122_03180 SM00382 ATPases associated with a variety of cellular activities A1122_03190 SM00382 ATPases associated with a variety of cellular activities A1122_03215 SM00967 RNA 2'-O ribose methyltransferase substrate binding A1122_03220 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_03220 SM00357 Cold shock protein domain A1122_03220 SM00955 A1122_03220 A1122_03230 SM00788 Adenylosuccinate synthetase A1122_03240 SM00244 prohibitin homologues A1122_03245 SM00244 prohibitin homologues A1122_03265 SM00853 MutL C terminal dimerisation domain A1122_03265 SM01340 A1122_03265 A1122_03270 SM00257 Lysin motif A1122_03270 SM00646 A1122_03270 A1122_03295 SM00479 A1122_03295 A1122_03355 SM01321 A1122_03355 A1122_03365 SM00841 Elongation factor P, C-terminal A1122_03365 SM01185 A1122_03365 A1122_03385 SM00883 Chaperonin 10 Kd subunit A1122_03420 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1122_03445 SM01276 A1122_03445 A1122_03475 SM00342 helix_turn_helix, arabinose operon control protein A1122_03480 SM00342 helix_turn_helix, arabinose operon control protein A1122_03500 SM01007 Class II Aldolase and Adducin N-terminal domain A1122_03535 SM01005 Alanine racemase, C-terminal domain A1122_03540 SM00382 ATPases associated with a variety of cellular activities A1122_03545 SM00829 Enoylreductase A1122_03575 SM00563 Phosphate acyltransferases A1122_03590 SM00869 Autotransporter beta-domain A1122_03600 SM00060 Fibronectin type 3 domain A1122_03695 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_03735 SM00382 ATPases associated with a variety of cellular activities A1122_03805 SM00382 ATPases associated with a variety of cellular activities A1122_03845 SM00342 helix_turn_helix, arabinose operon control protein A1122_03865 SM00387 Histidine kinase-like ATPases A1122_03865 SM00388 His Kinase A (phosphoacceptor) domain A1122_03865 SM00448 cheY-homologous receiver domain A1122_03870 SM00421 helix_turn_helix, Lux Regulon A1122_03870 SM00448 cheY-homologous receiver domain A1122_03905 SM00382 ATPases associated with a variety of cellular activities A1122_03970 SM00422 helix_turn_helix, mercury resistance A1122_03980 SM00662 RNA polymerases D A1122_03985 SM00363 S4 RNA-binding domain A1122_03985 SM01390 A1122_03985 A1122_04050 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A1122_04055 SM01374 A1122_04055 A1122_04075 SM00322 K homology RNA-binding domain A1122_04090 SM01382 A1122_04090 A1122_04090 SM01383 A1122_04090 A1122_04110 SM01403 A1122_04110 A1122_04125 SM01321 A1122_04125 A1122_04135 SM00838 Elongation factor G C-terminus A1122_04135 SM00889 Elongation factor G, domain IV A1122_04230 SM00382 ATPases associated with a variety of cellular activities A1122_04235 SM00062 Bacterial periplasmic substrate-binding proteins A1122_04270 SM00100 Cyclic nucleotide-monophosphate binding domain A1122_04270 SM00419 helix_turn_helix, cAMP Regulatory protein A1122_04310 SM00354 helix_turn _helix lactose operon repressor A1122_04320 SM00382 ATPases associated with a variety of cellular activities A1122_04440 SM00363 S4 RNA-binding domain A1122_04455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_04455 SM00387 Histidine kinase-like ATPases A1122_04455 SM00388 His Kinase A (phosphoacceptor) domain A1122_04460 SM00448 cheY-homologous receiver domain A1122_04460 SM00862 Transcriptional regulatory protein, C terminal A1122_04470 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_04470 SM00732 Likely ribonuclease with RNase H fold. A1122_04480 SM00899 A1122_04480 A1122_04530 SM00421 helix_turn_helix, Lux Regulon A1122_04535 SM00450 Rhodanese Homology Domain A1122_04545 SM00420 helix_turn_helix, Deoxyribose operon repressor A1122_04545 SM01134 A1122_04545 A1122_04595 SM00487 DEAD-like helicases superfamily A1122_04595 SM00490 helicase superfamily c-terminal domain A1122_04605 SM00354 helix_turn _helix lactose operon repressor A1122_04620 SM00382 ATPases associated with a variety of cellular activities A1122_04620 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_04660 SM00382 ATPases associated with a variety of cellular activities A1122_04665 SM00382 ATPases associated with a variety of cellular activities A1122_04670 SM01321 A1122_04670 A1122_04780 SM00448 cheY-homologous receiver domain A1122_04780 SM00862 Transcriptional regulatory protein, C terminal A1122_04785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_04785 SM00387 Histidine kinase-like ATPases A1122_04785 SM00388 His Kinase A (phosphoacceptor) domain A1122_04790 SM00342 helix_turn_helix, arabinose operon control protein A1122_04800 SM00971 Serine acetyltransferase, N-terminal A1122_04820 SM00450 Rhodanese Homology Domain A1122_04845 SM00829 Enoylreductase A1122_04885 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A1122_04885 SM01232 A1122_04885 A1122_04940 SM00532 Ligase N family A1122_04945 SM00072 Guanylate kinase homologues. A1122_04950 SM01409 A1122_04950 A1122_04955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1122_04955 SM00954 Region found in RelA / SpoT proteins A1122_04965 SM00487 DEAD-like helicases superfamily A1122_04965 SM00490 helicase superfamily c-terminal domain A1122_05005 SM00382 ATPases associated with a variety of cellular activities A1122_05030 SM01230 A1122_05030 A1122_05035 SM00091 PAS domain A1122_05035 SM00387 Histidine kinase-like ATPases A1122_05035 SM00388 His Kinase A (phosphoacceptor) domain A1122_05040 SM00382 ATPases associated with a variety of cellular activities A1122_05040 SM00448 cheY-homologous receiver domain A1122_05045 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_05060 SM01321 A1122_05060 A1122_05065 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A1122_05065 SM00474 3'-5' exonuclease A1122_05065 SM00475 5'-3' exonuclease A1122_05065 SM00482 DNA polymerase A domain A1122_05105 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_05105 SM00895 A1122_05105 A1122_05135 SM00382 ATPases associated with a variety of cellular activities A1122_05140 SM00327 von Willebrand factor (vWF) type A domain A1122_05150 SM00344 helix_turn_helix ASNC type A1122_05160 SM01228 A1122_05160 A1122_05205 SM00382 ATPases associated with a variety of cellular activities A1122_05240 SM00382 ATPases associated with a variety of cellular activities A1122_05255 SM00062 Bacterial periplasmic substrate-binding proteins A1122_05310 SM01234 A1122_05310 A1122_05330 SM00382 ATPases associated with a variety of cellular activities A1122_05330 SM00760 Bacterial dnaA protein helix-turn-helix domain A1122_05335 SM00480 DNA polymerase III beta subunit A1122_05350 SM00387 Histidine kinase-like ATPases A1122_05350 SM00433 TopoisomeraseII A1122_05420 SM00642 Alpha-amylase domain A1122_05510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1122_05510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_05510 SM01358 A1122_05510 A1122_05525 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1122_05650 SM00382 ATPases associated with a variety of cellular activities A1122_05660 SM00342 helix_turn_helix, arabinose operon control protein A1122_05690 SM00530 Helix-turn-helix XRE-family like proteins A1122_05705 SM00382 ATPases associated with a variety of cellular activities A1122_05775 SM00421 helix_turn_helix, Lux Regulon A1122_05775 SM00448 cheY-homologous receiver domain A1122_05780 SM00387 Histidine kinase-like ATPases A1122_05790 SM00912 haemagglutination activity domain A1122_05820 SM00382 ATPases associated with a variety of cellular activities A1122_05825 SM00382 ATPases associated with a variety of cellular activities A1122_05840 SM00052 Putative diguanylate phosphodiesterase A1122_05840 SM00267 diguanylate cyclase A1122_05880 SM00052 Putative diguanylate phosphodiesterase A1122_05900 SM00869 Autotransporter beta-domain A1122_05955 SM00235 Zinc-dependent metalloprotease A1122_05960 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A1122_05975 SM01321 A1122_05975 A1122_05995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_05995 SM00387 Histidine kinase-like ATPases A1122_05995 SM00388 His Kinase A (phosphoacceptor) domain A1122_05995 SM00448 cheY-homologous receiver domain A1122_06005 SM00382 ATPases associated with a variety of cellular activities A1122_06035 SM00448 cheY-homologous receiver domain A1122_06035 SM00862 Transcriptional regulatory protein, C terminal A1122_06045 SM00354 helix_turn _helix lactose operon repressor A1122_06080 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1122_06100 SM00257 Lysin motif A1122_06100 SM00634 Bacterial Ig-like domain (group 1) A1122_06110 SM00642 Alpha-amylase domain A1122_06115 SM00642 Alpha-amylase domain A1122_06160 SM00382 ATPases associated with a variety of cellular activities A1122_06180 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1122_06210 SM00382 ATPases associated with a variety of cellular activities A1122_06280 SM00382 ATPases associated with a variety of cellular activities A1122_06305 SM00382 ATPases associated with a variety of cellular activities A1122_06465 SM00487 DEAD-like helicases superfamily A1122_06465 SM00490 helicase superfamily c-terminal domain A1122_06475 SM00357 Cold shock protein domain A1122_06475 SM00382 ATPases associated with a variety of cellular activities A1122_06475 SM00959 Rho termination factor, N-terminal domain A1122_06495 SM00984 UDP binding domain A1122_06560 SM00382 ATPases associated with a variety of cellular activities A1122_06565 SM01321 A1122_06565 A1122_06600 SM01219 A1122_06600 A1122_06675 SM00341 Helicase and RNase D C-terminal A1122_06675 SM00487 DEAD-like helicases superfamily A1122_06675 SM00490 helicase superfamily c-terminal domain A1122_06675 SM00956 A1122_06675 A1122_06770 SM00382 ATPases associated with a variety of cellular activities A1122_06770 SM00962 SRP54-type protein, GTPase domain A1122_06770 SM00963 SRP54-type protein, helical bundle domain A1122_06775 SM00382 ATPases associated with a variety of cellular activities A1122_06795 SM01321 A1122_06795 A1122_06820 SM00382 ATPases associated with a variety of cellular activities A1122_06825 SM00382 ATPases associated with a variety of cellular activities A1122_06880 SM00382 ATPases associated with a variety of cellular activities A1122_06980 SM00382 ATPases associated with a variety of cellular activities A1122_06990 SM01004 Delta-aminolevulinic acid dehydratase A1122_06995 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A1122_06995 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A1122_07030 SM01321 A1122_07030 A1122_07075 SM00382 ATPases associated with a variety of cellular activities A1122_07095 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A1122_07095 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A1122_07100 SM00649 Ribosomal protein L11/L12 A1122_07125 SM00663 RNA polymerase I subunit A N-terminus A1122_07130 SM01321 A1122_07130 A1122_07140 SM00876 Biotin and Thiamin Synthesis associated domain A1122_07195 SM00411 bacterial (prokaryotic) histone like domain A1122_07205 SM01209 A1122_07205 A1122_07205 SM01210 A1122_07205 A1122_07210 SM00798 AICARFT/IMPCHase bienzyme A1122_07210 SM00851 MGS-like domain A1122_07250 SM00346 helix_turn_helix isocitrate lyase regulation A1122_07255 SM01018 B12 binding domain A1122_07260 SM00912 haemagglutination activity domain A1122_07310 SM00382 ATPases associated with a variety of cellular activities A1122_07395 SM00382 ATPases associated with a variety of cellular activities A1122_07395 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_07450 SM00860 SMI1 / KNR4 family A1122_07465 SM00530 Helix-turn-helix XRE-family like proteins A1122_07505 SM00342 helix_turn_helix, arabinose operon control protein A1122_07520 SM01133 A1122_07520 A1122_07530 SM00062 Bacterial periplasmic substrate-binding proteins A1122_07545 SM00382 ATPases associated with a variety of cellular activities A1122_07585 SM00382 ATPases associated with a variety of cellular activities A1122_07630 SM01321 A1122_07630 A1122_07635 SM00357 Cold shock protein domain A1122_07640 SM00357 Cold shock protein domain A1122_07655 SM00849 Metallo-beta-lactamase superfamily A1122_07675 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_07675 SM00895 A1122_07675 A1122_07715 SM00878 Biotin carboxylase C-terminal domain A1122_07740 SM00829 Enoylreductase A1122_07745 SM00052 Putative diguanylate phosphodiesterase A1122_07745 SM00267 diguanylate cyclase A1122_07770 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_07910 SM00642 Alpha-amylase domain A1122_07920 SM00354 helix_turn _helix lactose operon repressor A1122_07930 SM00382 ATPases associated with a variety of cellular activities A1122_07985 SM00382 ATPases associated with a variety of cellular activities A1122_08005 SM00116 Domain in cystathionine beta-synthase and other proteins. A1122_08015 SM00382 ATPases associated with a variety of cellular activities A1122_08050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1122_08055 SM01321 A1122_08055 A1122_08060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1122_08115 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_08125 SM00073 Histidine Phosphotransfer domain A1122_08125 SM00091 PAS domain A1122_08125 SM00387 Histidine kinase-like ATPases A1122_08125 SM00388 His Kinase A (phosphoacceptor) domain A1122_08125 SM00448 cheY-homologous receiver domain A1122_08140 SM00749 bacterial OsmY and nodulation domain A1122_08180 SM00382 ATPases associated with a variety of cellular activities A1122_08220 SM01321 A1122_08220 A1122_08265 SM00116 Domain in cystathionine beta-synthase and other proteins. A1122_08265 SM01091 Transporter associated domain A1122_08360 SM00387 Histidine kinase-like ATPases A1122_08360 SM00388 His Kinase A (phosphoacceptor) domain A1122_08365 SM00448 cheY-homologous receiver domain A1122_08365 SM00862 Transcriptional regulatory protein, C terminal A1122_08380 SM01103 A1122_08380 A1122_08390 SM00382 ATPases associated with a variety of cellular activities A1122_08415 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_08415 SM00322 K homology RNA-binding domain A1122_08435 SM01387 A1122_08435 A1122_08450 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_08450 SM00322 K homology RNA-binding domain A1122_08455 SM00028 Tetratricopeptide repeats A1122_08460 SM00487 DEAD-like helicases superfamily A1122_08460 SM00490 helicase superfamily c-terminal domain A1122_08475 SM00530 Helix-turn-helix XRE-family like proteins A1122_08555 SM00382 ATPases associated with a variety of cellular activities A1122_08570 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1122_08575 SM00849 Metallo-beta-lactamase superfamily A1122_08580 SM00072 Guanylate kinase homologues. A1122_08590 SM00382 ATPases associated with a variety of cellular activities A1122_08595 SM00382 ATPases associated with a variety of cellular activities A1122_08620 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_08620 SM00866 A1122_08620 A1122_08635 SM00382 ATPases associated with a variety of cellular activities A1122_08640 SM00382 ATPases associated with a variety of cellular activities A1122_08730 SM00382 ATPases associated with a variety of cellular activities A1122_08740 SM01321 A1122_08740 A1122_08760 SM01240 A1122_08760 A1122_08785 SM00644 A1122_08785 A1122_08800 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_08800 SM00895 A1122_08800 A1122_08825 SM01321 A1122_08825 A1122_08870 SM00947 Carbonic anhydrase A1122_08875 SM00382 ATPases associated with a variety of cellular activities A1122_08950 SM00487 DEAD-like helicases superfamily A1122_08950 SM00490 helicase superfamily c-terminal domain A1122_08950 SM00847 Helicase associated domain (HA2) Add an annotation A1122_08960 SM00382 ATPases associated with a variety of cellular activities A1122_09010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1122_09015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1122_09020 SM00073 Histidine Phosphotransfer domain A1122_09020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_09020 SM00387 Histidine kinase-like ATPases A1122_09020 SM00388 His Kinase A (phosphoacceptor) domain A1122_09020 SM00448 cheY-homologous receiver domain A1122_09030 SM00954 Region found in RelA / SpoT proteins A1122_09045 SM01192 A1122_09045 A1122_09045 SM01193 A1122_09045 A1122_09150 SM00257 Lysin motif A1122_09160 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A1122_09160 SM00534 ATPase domain of DNA mismatch repair MUTS family A1122_09170 SM00829 Enoylreductase A1122_09185 SM01120 A1122_09185 A1122_09200 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A1122_09215 SM00062 Bacterial periplasmic substrate-binding proteins A1122_09220 SM01235 A1122_09220 A1122_09285 SM00382 ATPases associated with a variety of cellular activities A1122_09290 SM01321 A1122_09290 A1122_09300 SM00420 helix_turn_helix, Deoxyribose operon repressor A1122_09300 SM01134 A1122_09300 A1122_09305 SM01007 Class II Aldolase and Adducin N-terminal domain A1122_09310 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1122_09355 SM00382 ATPases associated with a variety of cellular activities A1122_09370 SM00861 Transketolase, pyrimidine binding domain A1122_09400 SM00382 ATPases associated with a variety of cellular activities A1122_09410 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A1122_09445 SM01321 A1122_09445 A1122_09455 SM01321 A1122_09455 A1122_09460 SM01091 Transporter associated domain A1122_09465 SM00382 ATPases associated with a variety of cellular activities A1122_09485 SM00382 ATPases associated with a variety of cellular activities A1122_09485 SM00962 SRP54-type protein, GTPase domain A1122_09485 SM00963 SRP54-type protein, helical bundle domain A1122_09510 SM01321 A1122_09510 A1122_09535 SM00448 cheY-homologous receiver domain A1122_09535 SM00850 LytTr DNA-binding domain A1122_09545 SM00830 Chorismate mutase type II A1122_09555 SM00382 ATPases associated with a variety of cellular activities A1122_09565 SM00830 Chorismate mutase type II A1122_09575 SM01321 A1122_09575 A1122_09590 SM00363 S4 RNA-binding domain A1122_09600 SM00382 ATPases associated with a variety of cellular activities A1122_09600 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_09615 SM00155 Phospholipase D. Active site motifs. A1122_09620 SM00881 CoA binding domain A1122_09625 SM01144 A1122_09625 A1122_09635 SM00967 RNA 2'-O ribose methyltransferase substrate binding A1122_09650 SM00347 helix_turn_helix multiple antibiotic resistance protein A1122_09690 SM00062 Bacterial periplasmic substrate-binding proteins A1122_09705 SM00382 ATPases associated with a variety of cellular activities A1122_09715 SM00382 ATPases associated with a variety of cellular activities A1122_09750 SM00710 Parallel beta-helix repeats A1122_09750 SM00912 haemagglutination activity domain A1122_09795 SM00900 A1122_09795 A1122_09845 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A1122_09870 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A1122_09925 SM00382 ATPases associated with a variety of cellular activities A1122_09940 SM00448 cheY-homologous receiver domain A1122_09940 SM00862 Transcriptional regulatory protein, C terminal A1122_09945 SM00091 PAS domain A1122_09945 SM00387 Histidine kinase-like ATPases A1122_09945 SM00388 His Kinase A (phosphoacceptor) domain A1122_09965 SM00642 Alpha-amylase domain A1122_09985 SM01321 A1122_09985 A1122_10010 SM01323 A1122_10010 A1122_10025 SM01321 A1122_10025 A1122_10075 SM01321 A1122_10075 A1122_10080 SM00861 Transketolase, pyrimidine binding domain A1122_10095 SM00981 A1122_10095 A1122_10175 SM00382 ATPases associated with a variety of cellular activities A1122_10175 SM00994 ClpX C4-type zinc finger A1122_10175 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_10180 SM00382 ATPases associated with a variety of cellular activities A1122_10180 SM00464 Found in ATP-dependent protease La (LON) A1122_10185 SM00411 bacterial (prokaryotic) histone like domain A1122_10225 SM00344 helix_turn_helix ASNC type A1122_10230 SM00382 ATPases associated with a variety of cellular activities A1122_10235 SM00382 ATPases associated with a variety of cellular activities A1122_10240 SM00938 Nitrogen regulatory protein P-II A1122_10335 SM00382 ATPases associated with a variety of cellular activities A1122_10350 SM00382 ATPases associated with a variety of cellular activities A1122_10360 SM00493 A1122_10360 A1122_10365 SM00387 Histidine kinase-like ATPases A1122_10535 SM00422 helix_turn_helix, mercury resistance A1122_10545 SM00244 prohibitin homologues A1122_10555 SM00822 A1122_10555 A1122_10565 SM00382 ATPases associated with a variety of cellular activities A1122_10580 SM01001 AIR carboxylase A1122_10595 SM00840 A1122_10595 A1122_10605 SM01321 A1122_10605 A1122_10655 SM01130 A1122_10655 A1122_10665 SM01321 A1122_10665 A1122_10725 SM00382 ATPases associated with a variety of cellular activities A1122_10760 SM00421 helix_turn_helix, Lux Regulon A1122_10760 SM00448 cheY-homologous receiver domain A1122_10775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1122_10800 SM00919 Malic enzyme, NAD binding domain A1122_10800 SM01274 A1122_10800 A1122_10825 SM00869 Autotransporter beta-domain A1122_10845 SM01130 A1122_10845 A1122_10905 SM00382 ATPases associated with a variety of cellular activities A1122_10920 SM00448 cheY-homologous receiver domain A1122_10920 SM00862 Transcriptional regulatory protein, C terminal A1122_10925 SM00387 Histidine kinase-like ATPases A1122_10925 SM00388 His Kinase A (phosphoacceptor) domain A1122_10935 SM00327 von Willebrand factor (vWF) type A domain A1122_10965 SM00450 Rhodanese Homology Domain A1122_10970 SM00382 ATPases associated with a variety of cellular activities A1122_10980 SM00448 cheY-homologous receiver domain A1122_10980 SM00862 Transcriptional regulatory protein, C terminal A1122_10985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_10985 SM00387 Histidine kinase-like ATPases A1122_10985 SM00388 His Kinase A (phosphoacceptor) domain A1122_10995 SM01321 A1122_10995 A1122_11025 SM00771 ZipA, C-terminal domain (FtsZ-binding) A1122_11030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1122_11030 SM00292 breast cancer carboxy-terminal domain A1122_11030 SM00532 Ligase N family A1122_11055 SM01321 A1122_11055 A1122_11155 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1122_11175 SM00382 ATPases associated with a variety of cellular activities A1122_11200 SM00421 helix_turn_helix, Lux Regulon A1122_11245 SM00382 ATPases associated with a variety of cellular activities A1122_11245 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_11315 SM00382 ATPases associated with a variety of cellular activities A1122_11330 SM00195 Dual specificity phosphatase, catalytic domain A1122_11330 SM00404 Protein tyrosine phosphatase, catalytic domain motif A1122_11340 SM00563 Phosphate acyltransferases A1122_11415 SM01321 A1122_11415 A1122_11450 SM00382 ATPases associated with a variety of cellular activities A1122_11480 SM00924 MgtE intracellular N domain A1122_11510 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_11515 SM00382 ATPases associated with a variety of cellular activities A1122_11550 SM00448 cheY-homologous receiver domain A1122_11550 SM00862 Transcriptional regulatory protein, C terminal A1122_11570 SM00046 Diacylglycerol kinase catalytic domain (presumed) A1122_11640 SM01321 A1122_11640 A1122_11660 SM00116 Domain in cystathionine beta-synthase and other proteins. A1122_11660 SM01240 A1122_11660 A1122_11685 SM01321 A1122_11685 A1122_11695 SM00564 beta-propeller repeat A1122_11715 SM00530 Helix-turn-helix XRE-family like proteins A1122_11720 SM00028 Tetratricopeptide repeats A1122_11730 SM00562 A1122_11730 A1122_11735 SM00247 Beta/gamma crystallins A1122_11745 SM00869 Autotransporter beta-domain A1122_11790 SM00271 DnaJ molecular chaperone homology domain A1122_11825 SM01321 A1122_11825 A1122_11875 SM00938 Nitrogen regulatory protein P-II A1122_11890 SM00382 ATPases associated with a variety of cellular activities A1122_11890 SM00448 cheY-homologous receiver domain A1122_11900 SM00387 Histidine kinase-like ATPases A1122_11900 SM00388 His Kinase A (phosphoacceptor) domain A1122_11905 SM01321 A1122_11905 A1122_11930 SM01211 A1122_11930 A1122_11935 SM00062 Bacterial periplasmic substrate-binding proteins A1122_11965 SM01321 A1122_11965 A1122_11980 SM00382 ATPases associated with a variety of cellular activities A1122_12025 SM01217 A1122_12025 A1122_12065 SM00869 Autotransporter beta-domain A1122_12140 SM00052 Putative diguanylate phosphodiesterase A1122_12150 SM00382 ATPases associated with a variety of cellular activities A1122_12165 SM00062 Bacterial periplasmic substrate-binding proteins A1122_12210 SM00859 Semialdehyde dehydrogenase, NAD binding domain A1122_12215 SM01321 A1122_12215 A1122_12225 SM00342 helix_turn_helix, arabinose operon control protein A1122_12260 SM00825 Beta-ketoacyl synthase A1122_12300 SM00463 Small MutS-related domain A1122_12305 SM00855 Phosphoglycerate mutase family A1122_12375 SM00382 ATPases associated with a variety of cellular activities A1122_12440 SM00382 ATPases associated with a variety of cellular activities A1122_12460 SM00358 Double-stranded RNA binding motif A1122_12460 SM00535 Ribonuclease III family A1122_12510 SM00487 DEAD-like helicases superfamily A1122_12510 SM00490 helicase superfamily c-terminal domain A1122_12515 SM00248 ankyrin repeats A1122_12535 SM00986 Uracil DNA glycosylase superfamily A1122_12535 SM00987 UreE urease accessory protein, C-terminal domain A1122_12560 SM00797 Allophanate hydrolase subunit 2 A1122_12565 SM00796 Allophanate hydrolase subunit 1 A1122_12620 SM00387 Histidine kinase-like ATPases A1122_12620 SM00388 His Kinase A (phosphoacceptor) domain A1122_12625 SM00448 cheY-homologous receiver domain A1122_12625 SM00862 Transcriptional regulatory protein, C terminal A1122_12670 SM00342 helix_turn_helix, arabinose operon control protein A1122_12750 SM00988 UreE urease accessory protein, N-terminal domain A1122_12770 SM00382 ATPases associated with a variety of cellular activities A1122_12775 SM00382 ATPases associated with a variety of cellular activities A1122_12795 SM00357 Cold shock protein domain A1122_12850 SM00382 ATPases associated with a variety of cellular activities A1122_12880 SM00382 ATPases associated with a variety of cellular activities A1122_12935 SM01081 Putative carbohydrate binding domain A1122_12950 SM01321 A1122_12950 A1122_13000 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_13015 SM00116 Domain in cystathionine beta-synthase and other proteins. A1122_13015 SM01091 Transporter associated domain A1122_13025 SM00062 Bacterial periplasmic substrate-binding proteins A1122_13040 SM00382 ATPases associated with a variety of cellular activities A1122_13095 SM00936 Penicillin-binding protein 5, C-terminal domain A1122_13110 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_13130 SM00357 Cold shock protein domain A1122_13145 SM00421 helix_turn_helix, Lux Regulon A1122_13170 SM00382 ATPases associated with a variety of cellular activities A1122_13205 SM00382 ATPases associated with a variety of cellular activities A1122_13250 SM01359 A1122_13250 A1122_13250 SM01360 A1122_13250 A1122_13275 SM00354 helix_turn _helix lactose operon repressor A1122_13320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1122_13360 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A1122_13365 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A1122_13365 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A1122_13435 SM00354 helix_turn _helix lactose operon repressor A1122_13505 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A1122_13550 SM00382 ATPases associated with a variety of cellular activities A1122_13560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A1122_13560 SM00091 PAS domain A1122_13560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1122_13565 SM00382 ATPases associated with a variety of cellular activities A1122_13575 SM00062 Bacterial periplasmic substrate-binding proteins A1122_13575 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A1122_13625 SM00829 Enoylreductase A1122_13635 SM00382 ATPases associated with a variety of cellular activities A1122_13645 SM00354 helix_turn _helix lactose operon repressor A1122_13655 SM01329 A1122_13655 A1122_13685 SM00912 haemagglutination activity domain A1122_13740 SM00382 ATPases associated with a variety of cellular activities A1122_13750 SM00354 helix_turn _helix lactose operon repressor A1122_13860 SM00421 helix_turn_helix, Lux Regulon A1122_13885 SM00450 Rhodanese Homology Domain A1122_13895 SM00421 helix_turn_helix, Lux Regulon A1122_13940 SM00382 ATPases associated with a variety of cellular activities A1122_13975 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A1122_14000 SM00873 B3/4 domain A1122_14000 SM00874 tRNA synthetase B5 domain A1122_14000 SM00896 Ferredoxin-fold anticodon binding domain A1122_14005 SM00411 bacterial (prokaryotic) histone like domain A1122_14025 SM00382 ATPases associated with a variety of cellular activities A1122_14130 SM00382 ATPases associated with a variety of cellular activities A1122_14155 SM00382 ATPases associated with a variety of cellular activities A1122_14165 SM01321 A1122_14165 A1122_14205 SM00354 helix_turn _helix lactose operon repressor A1122_14230 SM00479 A1122_14230 A1122_14270 SM00347 helix_turn_helix multiple antibiotic resistance protein A1122_14295 SM00363 S4 RNA-binding domain A1122_14315 SM00382 ATPases associated with a variety of cellular activities A1122_14340 SM00382 ATPases associated with a variety of cellular activities A1122_14345 SM00382 ATPases associated with a variety of cellular activities A1122_14370 SM01321 A1122_14370 A1122_14375 SM00382 ATPases associated with a variety of cellular activities A1122_14410 SM00953 A1122_14410 A1122_14420 SM00091 PAS domain A1122_14420 SM00382 ATPases associated with a variety of cellular activities A1122_14425 SM01321 A1122_14425 A1122_14435 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A1122_14455 SM00422 helix_turn_helix, mercury resistance A1122_14475 SM00890 Domain of unknown function A1122_14535 SM00382 ATPases associated with a variety of cellular activities A1122_14535 SM00487 DEAD-like helicases superfamily A1122_14535 SM00490 helicase superfamily c-terminal domain A1122_14535 SM00847 Helicase associated domain (HA2) Add an annotation A1122_14545 SM00530 Helix-turn-helix XRE-family like proteins A1122_14550 SM00020 Trypsin-like serine protease A1122_14565 SM00867 YceI-like domain A1122_14590 SM01321 A1122_14590 A1122_14600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_14600 SM00387 Histidine kinase-like ATPases A1122_14600 SM00388 His Kinase A (phosphoacceptor) domain A1122_14605 SM00448 cheY-homologous receiver domain A1122_14605 SM00862 Transcriptional regulatory protein, C terminal A1122_14625 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A1122_14625 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A1122_14640 SM00100 Cyclic nucleotide-monophosphate binding domain A1122_14640 SM00419 helix_turn_helix, cAMP Regulatory protein A1122_14650 SM00098 Alkaline phosphatase homologues A1122_14730 SM00354 helix_turn _helix lactose operon repressor A1122_14780 SM00530 Helix-turn-helix XRE-family like proteins A1122_14855 SM00342 helix_turn_helix, arabinose operon control protein A1122_14865 SM00382 ATPases associated with a variety of cellular activities A1122_14890 SM00382 ATPases associated with a variety of cellular activities A1122_14935 SM00342 helix_turn_helix, arabinose operon control protein A1122_14945 SM00900 A1122_14945 A1122_14955 SM00478 endonuclease III A1122_14955 SM00525 A1122_14955 A1122_14970 SM00357 Cold shock protein domain A1122_14970 SM00955 A1122_14970 A1122_14995 SM01007 Class II Aldolase and Adducin N-terminal domain A1122_15010 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A1122_15020 SM00028 Tetratricopeptide repeats A1122_15030 SM00014 Acid phosphatase homologues A1122_15055 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A1122_15055 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A1122_15055 SM00493 A1122_15055 A1122_15075 SM00822 A1122_15075 A1122_15085 SM00363 S4 RNA-binding domain A1122_15095 SM00481 DNA polymerase alpha chain like domain A1122_15130 SM00749 bacterial OsmY and nodulation domain A1122_15205 SM00155 Phospholipase D. Active site motifs. A1122_15225 SM00382 ATPases associated with a variety of cellular activities A1122_15230 SM00382 ATPases associated with a variety of cellular activities A1122_15265 SM00382 ATPases associated with a variety of cellular activities A1122_15275 SM00528 Domain in histone-like proteins of HNS family A1122_15280 SM00984 UDP binding domain A1122_15285 SM00448 cheY-homologous receiver domain A1122_15330 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A1122_15330 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A1122_15330 SM00493 A1122_15330 A1122_15350 SM00870 A1122_15350 A1122_15370 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A1122_15385 SM00763 PrkA AAA domain A1122_15425 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_15480 SM00060 Fibronectin type 3 domain A1122_15505 SM01040 BRO family, N-terminal domain A1122_15525 SM00232 JAB/MPN domain A1122_15535 SM01321 A1122_15535 A1122_15560 SM00635 Bacterial Ig-like domain 2 A1122_15590 SM00635 Bacterial Ig-like domain 2 A1122_15680 SM01040 BRO family, N-terminal domain A1122_15710 SM00382 ATPases associated with a variety of cellular activities A1122_15765 SM00341 Helicase and RNase D C-terminal A1122_15765 SM00474 3'-5' exonuclease A1122_15795 SM00487 DEAD-like helicases superfamily A1122_15795 SM00491 A1122_15795 A1122_15850 SM00257 Lysin motif A1122_15860 SM00382 ATPases associated with a variety of cellular activities A1122_15870 SM00382 ATPases associated with a variety of cellular activities A1122_15875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1122_15930 SM00836 DALR anticodon binding domain A1122_15930 SM01016 Arginyl tRNA synthetase N terminal dom A1122_15935 SM00912 haemagglutination activity domain A1122_15980 SM00481 DNA polymerase alpha chain like domain A1122_16000 SM01321 A1122_16000 A1122_16040 SM00382 ATPases associated with a variety of cellular activities A1122_16050 SM01321 A1122_16050 A1122_16080 SM00937 A1122_16080 A1122_16105 SM01400 A1122_16105 A1122_16140 SM00450 Rhodanese Homology Domain A1122_16175 SM00448 cheY-homologous receiver domain A1122_16175 SM00862 Transcriptional regulatory protein, C terminal A1122_16180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_16180 SM00387 Histidine kinase-like ATPases A1122_16180 SM00388 His Kinase A (phosphoacceptor) domain A1122_16235 SM00671 Sel1-like repeats. A1122_16240 SM00671 Sel1-like repeats. A1122_16320 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_16320 SM00866 A1122_16320 A1122_16340 SM00382 ATPases associated with a variety of cellular activities A1122_16370 SM00382 ATPases associated with a variety of cellular activities A1122_16405 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_16405 SM00866 A1122_16405 A1122_16535 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A1122_16535 SM00465 GIY-YIG type nucleases (URI domain) A1122_16540 SM00421 helix_turn_helix, Lux Regulon A1122_16540 SM00448 cheY-homologous receiver domain A1122_16625 SM00382 ATPases associated with a variety of cellular activities A1122_16635 SM00062 Bacterial periplasmic substrate-binding proteins A1122_16635 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A1122_16675 SM00342 helix_turn_helix, arabinose operon control protein A1122_16690 SM00478 endonuclease III A1122_16725 SM00382 ATPases associated with a variety of cellular activities A1122_16795 SM00382 ATPases associated with a variety of cellular activities A1122_16810 SM01007 Class II Aldolase and Adducin N-terminal domain A1122_16830 SM00047 Lysozyme subfamily 2 A1122_16875 SM00858 A1122_16875 A1122_16890 SM00634 Bacterial Ig-like domain (group 1) A1122_16895 SM01321 A1122_16895 A1122_16975 SM01022 A1122_16975 A1122_16985 SM00487 DEAD-like helicases superfamily A1122_16985 SM00490 helicase superfamily c-terminal domain A1122_17015 SM00903 Flavin reductase like domain A1122_17065 SM00347 helix_turn_helix multiple antibiotic resistance protein A1122_17070 SM01091 Transporter associated domain A1122_17115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A1122_17115 SM00091 PAS domain A1122_17115 SM00267 diguanylate cyclase A1122_17135 SM00357 Cold shock protein domain A1122_17190 SM00342 helix_turn_helix, arabinose operon control protein A1122_17205 SM00382 ATPases associated with a variety of cellular activities A1122_17210 SM00090 RIO-like kinase A1122_17230 SM00382 ATPases associated with a variety of cellular activities A1122_17240 SM00354 helix_turn _helix lactose operon repressor A1122_17280 SM00382 ATPases associated with a variety of cellular activities A1122_17305 SM00644 A1122_17305 A1122_17310 SM00346 helix_turn_helix isocitrate lyase regulation A1122_17355 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1122_17355 SM00245 tail specific protease A1122_17360 SM00945 ProQ/FINO family A1122_17380 SM00972 Spore Coat Protein U domain A1122_17385 SM00972 Spore Coat Protein U domain A1122_17390 SM00972 Spore Coat Protein U domain A1122_17405 SM00972 Spore Coat Protein U domain A1122_17415 SM01022 A1122_17415 A1122_17425 SM00382 ATPases associated with a variety of cellular activities A1122_17450 SM01005 Alanine racemase, C-terminal domain A1122_17470 SM00644 A1122_17470 A1122_17480 SM00448 cheY-homologous receiver domain A1122_17485 SM00448 cheY-homologous receiver domain A1122_17490 SM00138 Methyltransferase, chemotaxis proteins A1122_17505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1122_17505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_17505 SM00319 Homologues of the ligand binding domain of Tar A1122_17520 SM00869 Autotransporter beta-domain A1122_17545 SM00260 Two component signalling adaptor domain A1122_17550 SM00073 Histidine Phosphotransfer domain A1122_17550 SM00260 Two component signalling adaptor domain A1122_17550 SM00387 Histidine kinase-like ATPases A1122_17550 SM01231 A1122_17550 A1122_17575 SM00831 Cation transporter/ATPase, N-terminus A1122_17585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1122_17585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_17585 SM00319 Homologues of the ligand binding domain of Tar A1122_17600 SM00357 Cold shock protein domain A1122_17605 SM01038 Beta galactosidase small chain A1122_17610 SM00829 Enoylreductase A1122_17620 SM00344 helix_turn_helix ASNC type A1122_17660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A1122_17660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1122_17670 SM00354 helix_turn _helix lactose operon repressor A1122_17675 SM01329 A1122_17675 A1122_17710 SM00448 cheY-homologous receiver domain A1122_17710 SM00862 Transcriptional regulatory protein, C terminal A1122_17715 SM00387 Histidine kinase-like ATPases A1122_17715 SM00388 His Kinase A (phosphoacceptor) domain A1122_17720 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A1122_17750 SM00382 ATPases associated with a variety of cellular activities A1122_17760 SM00487 DEAD-like helicases superfamily A1122_17760 SM00490 helicase superfamily c-terminal domain A1122_17760 SM00982 A1122_17760 A1122_17760 SM01058 CarD-like/TRCF domain A1122_17775 SM00382 ATPases associated with a variety of cellular activities A1122_17835 SM01321 A1122_17835 A1122_17875 SM01321 A1122_17875 A1122_17880 SM00825 Beta-ketoacyl synthase A1122_17890 SM00822 A1122_17890 A1122_17895 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1122_17925 SM01321 A1122_17925 A1122_17930 SM00363 S4 RNA-binding domain A1122_17935 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_18015 SM00421 helix_turn_helix, Lux Regulon A1122_18015 SM00448 cheY-homologous receiver domain A1122_18060 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A1122_18085 SM00634 Bacterial Ig-like domain (group 1) A1122_18130 SM00382 ATPases associated with a variety of cellular activities A1122_18135 SM00382 ATPases associated with a variety of cellular activities A1122_18195 SM01350 A1122_18195 A1122_18240 SM00382 ATPases associated with a variety of cellular activities A1122_18250 SM01006 Siderophore biosynthesis protein domain A1122_18270 SM01091 Transporter associated domain A1122_18300 SM01321 A1122_18300 A1122_18310 SM00382 ATPases associated with a variety of cellular activities A1122_18355 SM00919 Malic enzyme, NAD binding domain A1122_18355 SM01274 A1122_18355 A1122_18370 SM00382 ATPases associated with a variety of cellular activities A1122_18405 SM00829 Enoylreductase A1122_18430 SM00382 ATPases associated with a variety of cellular activities A1122_18440 SM00852 Probable molybdopterin binding domain A1122_18460 SM00382 ATPases associated with a variety of cellular activities A1122_18570 SM00382 ATPases associated with a variety of cellular activities A1122_18570 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_18605 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A1122_18645 SM00825 Beta-ketoacyl synthase A1122_18705 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A1122_18710 SM00992 Hemimethylated DNA-binding protein YccV like A1122_18715 SM00881 CoA binding domain A1122_18725 SM00851 MGS-like domain A1122_18765 SM01321 A1122_18765 A1122_18795 SM00382 ATPases associated with a variety of cellular activities A1122_18800 SM00062 Bacterial periplasmic substrate-binding proteins A1122_18815 SM00244 prohibitin homologues A1122_18840 SM00382 ATPases associated with a variety of cellular activities A1122_18875 SM00062 Bacterial periplasmic substrate-binding proteins A1122_18875 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A1122_18880 SM00382 ATPases associated with a variety of cellular activities A1122_18885 SM00830 Chorismate mutase type II A1122_18945 SM00382 ATPases associated with a variety of cellular activities A1122_18950 SM00357 Cold shock protein domain A1122_18960 SM00382 ATPases associated with a variety of cellular activities A1122_18960 SM01086 C-terminal, D2-small domain, of ClpB protein A1122_18965 SM01321 A1122_18965 A1122_18970 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_18980 SM00382 ATPases associated with a variety of cellular activities A1122_18985 SM00382 ATPases associated with a variety of cellular activities A1122_19000 SM00344 helix_turn_helix ASNC type A1122_19005 SM00843 A1122_19005 A1122_19015 SM00382 ATPases associated with a variety of cellular activities A1122_19055 SM00870 A1122_19055 A1122_19085 SM00316 Ribosomal protein S1-like RNA-binding domain A1122_19090 SM00411 bacterial (prokaryotic) histone like domain A1122_19100 SM00849 Metallo-beta-lactamase superfamily A1122_19105 SM00382 ATPases associated with a variety of cellular activities A1122_19115 SM01150 A1122_19115 A1122_19125 SM00357 Cold shock protein domain A1122_19175 SM01321 A1122_19175 A1122_19190 SM00849 Metallo-beta-lactamase superfamily A1122_19240 SM00981 A1122_19240 A1122_19245 SM00382 ATPases associated with a variety of cellular activities A1122_19275 SM01321 A1122_19275 A1122_19280 SM00825 Beta-ketoacyl synthase A1122_19285 SM00382 ATPases associated with a variety of cellular activities A1122_19315 SM00778 Zinc-binding domain of primase-helicase A1122_19350 SM01321 A1122_19350 A1122_19420 SM00861 Transketolase, pyrimidine binding domain A1122_19435 SM00881 CoA binding domain A1122_19520 SM00382 ATPases associated with a variety of cellular activities A1122_19535 SM00855 Phosphoglycerate mutase family A1122_19580 SM00382 ATPases associated with a variety of cellular activities A1122_19605 SM00382 ATPases associated with a variety of cellular activities A1122_19625 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_19625 SM00876 Biotin and Thiamin Synthesis associated domain A1122_19645 SM00382 ATPases associated with a variety of cellular activities A1122_19655 SM00487 DEAD-like helicases superfamily A1122_19655 SM00490 helicase superfamily c-terminal domain A1122_19675 SM00729 Elongator protein 3, MiaB family, Radical SAM A1122_19705 SM01321 A1122_19705 A1122_19750 SM01321 A1122_19750 A1122_19780 SM01118 A1122_19780 A1122_19785 SM00507 HNH nucleases A1122_19800 SM00382 ATPases associated with a variety of cellular activities A1122_19845 SM00382 ATPases associated with a variety of cellular activities A1122_19860 SM00450 Rhodanese Homology Domain A1122_19880 SM00382 ATPases associated with a variety of cellular activities A1122_19920 SM00487 DEAD-like helicases superfamily A1122_19920 SM00488 A1122_19920 A1122_19920 SM00491 A1122_19920 A1122_19925 SM01060 A1122_19925 A1122_19940 SM00852 Probable molybdopterin binding domain A1122_19970 SM00434 DNA Topoisomerase IV A1122_19980 SM00387 Histidine kinase-like ATPases A1122_19980 SM00388 His Kinase A (phosphoacceptor) domain A1122_19980 SM00448 cheY-homologous receiver domain A1122_19985 SM00421 helix_turn_helix, Lux Regulon A1122_19985 SM00448 cheY-homologous receiver domain A1122_20015 SM01321 A1122_20015 A1122_20040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A1122_20040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A1122_20055 SM00530 Helix-turn-helix XRE-family like proteins A1122_20070 SM01007 Class II Aldolase and Adducin N-terminal domain A1122_20075 SM00420 helix_turn_helix, Deoxyribose operon repressor A1122_20075 SM01134 A1122_20075 A1122_20225 SM01321 A1122_20225 A1122_20235 SM00487 DEAD-like helicases superfamily A1122_20235 SM00490 helicase superfamily c-terminal domain A1122_20240 SM00363 S4 RNA-binding domain A1122_20255 SM00382 ATPases associated with a variety of cellular activities A1122_20275 SM00052 Putative diguanylate phosphodiesterase A1122_20285 SM00014 Acid phosphatase homologues A1122_20290 SM00833 Cobalamin synthesis protein cobW C-terminal domain A1122_20300 SM00345 helix_turn_helix gluconate operon transcriptional repressor A1122_20300 SM00895 A1122_20300 A1122_20315 SM00841 Elongation factor P, C-terminal A1122_20315 SM01185 A1122_20315 A1122_20365 SM00382 ATPases associated with a variety of cellular activities A1122_20395 SM00862 Transcriptional regulatory protein, C terminal A1122_20420 SM00518 AP endonuclease family 2 A1122_20450 SM00382 ATPases associated with a variety of cellular activities A1122_20480 SM00382 ATPases associated with a variety of cellular activities A1122_20480 SM00930 A1122_20480 A1122_20490 SM00936 Penicillin-binding protein 5, C-terminal domain A1122_20505 SM00420 helix_turn_helix, Deoxyribose operon repressor A1122_20505 SM01134 A1122_20505 A1122_20510 SM01133 A1122_20510 A1122_20515 SM00014 Acid phosphatase homologues A1122_20550 SM00382 ATPases associated with a variety of cellular activities A1122_20585 SM00382 ATPases associated with a variety of cellular activities A1122_20605 SM00479 A1122_20605 A1122_20620 SM00849 Metallo-beta-lactamase superfamily A1122_20625 SM00257 Lysin motif A1122_20650 SM00382 ATPases associated with a variety of cellular activities A1122_20650 SM00930 A1122_20650 A1122_20690 SM01322 A1122_20690 A1122_20710 SM00977 TilS substrate C-terminal domain A1122_20725 SM00481 DNA polymerase alpha chain like domain A1122_20755 SM00935 Outer membrane protein (OmpH-like) A1122_20765 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A1122_20810 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A1122_20840 SM01321 A1122_20840 A1122_20860 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A1122_20860 SM00475 5'-3' exonuclease A1122_20900 SM00925 MltA specific insert domain A1122_20905 SM00646 A1122_20905 A1122_20950 SM00382 ATPases associated with a variety of cellular activities A1122_20960 SM00823 Phosphopantetheine attachment site A1122_20960 SM00825 Beta-ketoacyl synthase A1122_20980 SM00364 Leucine-rich repeats, bacterial type A1122_20980 SM00369 Leucine-rich repeats, typical (most populated) subfamily A1122_20985 SM00364 Leucine-rich repeats, bacterial type A1122_20990 SM00364 Leucine-rich repeats, bacterial type A1122_20995 SM00869 Autotransporter beta-domain A1122_21030 SM00052 Putative diguanylate phosphodiesterase A1122_21030 SM00091 PAS domain A1122_21030 SM00267 diguanylate cyclase A1122_21267 SM00382 ATPases associated with a variety of cellular activities A1122_21272 SM00470 ParB-like nuclease domain A1122_21277 SM00470 ParB-like nuclease domain A1122_21282 SM00487 DEAD-like helicases superfamily A1122_21282 SM00490 helicase superfamily c-terminal domain A1122_21322 SM01321 A1122_21322 A1122_21352 SM00062 Bacterial periplasmic substrate-binding proteins A1122_21402 SM00244 prohibitin homologues A1122_21422 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A1122_21422 SM00475 5'-3' exonuclease A1122_21457 SM00382 ATPases associated with a variety of cellular activities A1122_21467 SM00470 ParB-like nuclease domain A1122_21517 SM00382 ATPases associated with a variety of cellular activities A1122_21527 SM00470 ParB-like nuclease domain A1122_21547 SM00857 Resolvase, N terminal domain A1122_21572 SM00155 Phospholipase D. Active site motifs. A1122_21607 SM00342 helix_turn_helix, arabinose operon control protein A1122_21652 SM00481 DNA polymerase alpha chain like domain A1122_21662 SM00382 ATPases associated with a variety of cellular activities A1122_21697 SM00232 JAB/MPN domain A1122_21727 SM00635 Bacterial Ig-like domain 2 A1122_21757 SM00635 Bacterial Ig-like domain 2 A1122_21782 SM00530 Helix-turn-helix XRE-family like proteins A1122_21807 SM00382 ATPases associated with a variety of cellular activities