locus-tag class description ISU55_00005 IPR003593 AAA+ ATPase domain ISU55_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00005 IPR038454 DnaA, N-terminal domain superfamily ISU55_00005 IPR024633 DnaA N-terminal domain ISU55_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal ISU55_00005 IPR010921 Trp repressor/replication initiator ISU55_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site ISU55_00005 IPR013317 Chromosomal replication initiator protein DnaA ISU55_00005 IPR020591 Chromosomal replication control, initiator DnaA-like ISU55_00005 IPR001957 Chromosomal replication control, initiator DnaA ISU55_00010 IPR022637 DNA polymerase III, beta sliding clamp, central ISU55_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal ISU55_00010 IPR001001 DNA polymerase III, beta sliding clamp ISU55_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal ISU55_00015 IPR042174 DNA-binding RecF, domain 2 ISU55_00015 IPR018078 DNA-binding, RecF, conserved site ISU55_00015 IPR001238 DNA-binding, RecF ISU55_00015 IPR003395 RecF/RecN/SMC, N-terminal ISU55_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_00020 IPR002288 DNA gyrase B subunit, C-terminal ISU55_00020 IPR011557 DNA gyrase, subunit B ISU55_00020 IPR041423 DNA gyrase subunit B insert domain ISU55_00020 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_00020 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_00020 IPR001241 DNA topoisomerase, type IIA ISU55_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain ISU55_00020 IPR006171 TOPRIM domain ISU55_00020 IPR018522 DNA topoisomerase, type IIA, conserved site ISU55_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ISU55_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal ISU55_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 ISU55_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_00025 IPR023214 HAD superfamily ISU55_00025 IPR006379 HAD-superfamily hydrolase, subfamily IIB ISU55_00025 IPR036412 HAD-like superfamily ISU55_00025 IPR000150 Cof family ISU55_00035 IPR014334 Ectoine utilization protein EutC ISU55_00035 IPR003462 Ornithine cyclodeaminase/mu-crystallin ISU55_00035 IPR023401 Ornithine cyclodeaminase, N-terminal ISU55_00035 IPR036291 NAD(P)-binding domain superfamily ISU55_00040 IPR002912 ACT domain ISU55_00040 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_00040 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site ISU55_00040 IPR005789 Threonine dehydratase, catabolic ISU55_00040 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_00050 IPR010780 Protein of unknown function DUF1375 ISU55_00055 IPR023728 Small heat shock protein IbpA ISU55_00055 IPR002068 Alpha crystallin/Hsp20 domain ISU55_00055 IPR008978 HSP20-like chaperone ISU55_00055 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain ISU55_00060 IPR008978 HSP20-like chaperone ISU55_00060 IPR022848 Small heat shock protein IbpB ISU55_00060 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain ISU55_00060 IPR002068 Alpha crystallin/Hsp20 domain ISU55_00065 IPR006512 YidE/YbjL duplication ISU55_00065 IPR023018 Transport protein YidE, putative ISU55_00065 IPR006037 Regulator of K+ conductance, C-terminal ISU55_00065 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ISU55_00070 IPR004839 Aminotransferase, class I/classII ISU55_00070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_00070 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_00080 IPR017853 Glycoside hydrolase superfamily ISU55_00080 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ISU55_00080 IPR014635 Alpha-amylase, MalS type ISU55_00085 IPR036291 NAD(P)-binding domain superfamily ISU55_00085 IPR023756 Glyoxylate/hydroxypyruvate reductase B ISU55_00085 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ISU55_00085 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ISU55_00085 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ISU55_00085 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU55_00095 IPR036737 OmpA-like domain superfamily ISU55_00095 IPR006690 Outer membrane protein, OmpA-like, conserved site ISU55_00095 IPR006665 OmpA-like domain ISU55_00095 IPR006664 Outer membrane protein, bacterial ISU55_00095 IPR039567 Glycine zipper domain ISU55_00105 IPR004597 DNA-3-methyladenine glycosylase I ISU55_00105 IPR011257 DNA glycosylase ISU55_00105 IPR005019 Methyladenine glycosylase ISU55_00110 IPR002310 Glycine-tRNA ligase, alpha subunit ISU55_00110 IPR006194 Glycine-tRNA synthetase, heterodimeric ISU55_00115 IPR006194 Glycine-tRNA synthetase, heterodimeric ISU55_00115 IPR015944 Glycine-tRNA ligase, beta subunit ISU55_00115 IPR008909 DALR anticodon binding ISU55_00125 IPR021413 Protein of unknown function DUF3053 ISU55_00130 IPR013014 Phosphotransferase system, EIIC component, type 2 ISU55_00130 IPR003352 Phosphotransferase system, EIIC ISU55_00130 IPR016152 Phosphotransferase/anion transporter ISU55_00130 IPR002178 PTS EIIA type-2 domain ISU55_00130 IPR036095 PTS system IIB component-like superfamily ISU55_00130 IPR013011 Phosphotransferase system, EIIB component, type 2 ISU55_00130 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ISU55_00130 IPR029503 Phosphotransferase system EIIB component, mannitol-specific ISU55_00130 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC ISU55_00135 IPR036291 NAD(P)-binding domain superfamily ISU55_00135 IPR013131 Mannitol dehydrogenase, N-terminal ISU55_00135 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_00135 IPR013118 Mannitol dehydrogenase, C-terminal ISU55_00135 IPR000669 Mannitol dehydrogenase ISU55_00135 IPR023028 Mannitol-1-phosphate 5-dehydrogenase ISU55_00135 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_00135 IPR023027 Mannitol dehydrogenase, conserved site ISU55_00140 IPR038026 MtlR-like superfamily ISU55_00140 IPR007761 Mannitol repressor MtlR-like ISU55_00145 IPR021230 Protein of unknown function DUF2810 ISU55_00160 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ISU55_00160 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily ISU55_00160 IPR004090 Chemotaxis methyl-accepting receptor ISU55_00160 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site ISU55_00160 IPR003660 HAMP domain ISU55_00160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU55_00165 IPR019832 Manganese/iron superoxide dismutase, C-terminal ISU55_00165 IPR001189 Manganese/iron superoxide dismutase ISU55_00165 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily ISU55_00165 IPR019831 Manganese/iron superoxide dismutase, N-terminal ISU55_00165 IPR019833 Manganese/iron superoxide dismutase, binding site ISU55_00165 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily ISU55_00170 IPR016193 Cytidine deaminase-like ISU55_00170 IPR003786 Sulfur carrier protein FdhD ISU55_00180 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria ISU55_00180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_00180 IPR038384 Formate dehydrogenase, C-terminal domain superfamily ISU55_00180 IPR014603 Formate dehydrogenase iron-sulphur subunit ISU55_00180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_00180 IPR015246 Formate dehydrogenase, transmembrane ISU55_00185 IPR016174 Di-haem cytochrome, transmembrane ISU55_00185 IPR006471 Formate dehydrogenase, gamma subunit ISU55_00185 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase ISU55_00190 IPR024064 FdhE-like superfamily ISU55_00190 IPR006452 Formate dehydrogenase accessory protein ISU55_00195 IPR004534 L-seryl-tRNA(Sec) selenium transferase ISU55_00195 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain ISU55_00195 IPR018319 L-seryl-tRNA selenium transferase-like ISU55_00195 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_00195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_00200 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_00200 IPR004535 Translation elongation factor, selenocysteine-specific ISU55_00200 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ISU55_00200 IPR000795 Transcription factor, GTP-binding domain ISU55_00200 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00200 IPR031157 Tr-type G domain, conserved site ISU55_00200 IPR015191 Translation elongation factor SelB, winged helix, type 3 ISU55_00200 IPR015190 Translation elongation factor SelB, winged helix, type 2 ISU55_00200 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_00200 IPR036390 Winged helix DNA-binding domain superfamily ISU55_00200 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_00230 IPR036259 MFS transporter superfamily ISU55_00230 IPR020846 Major facilitator superfamily domain ISU55_00230 IPR011701 Major facilitator superfamily ISU55_00260 IPR010263 Type VI secretion protein, VC_A0114 ISU55_00270 IPR004176 Clp, N-terminal ISU55_00270 IPR019489 Clp ATPase, C-terminal ISU55_00270 IPR036628 Clp, N-terminal domain superfamily ISU55_00270 IPR017729 Type VI secretion system, ATPase ClpV1 ISU55_00270 IPR001270 ClpA/B family ISU55_00270 IPR018368 ClpA/B, conserved site 1 ISU55_00270 IPR041546 ClpA/ClpB, AAA lid domain ISU55_00270 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00270 IPR003593 AAA+ ATPase domain ISU55_00270 IPR003959 ATPase, AAA-type, core ISU55_00305 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ISU55_00305 IPR006531 Gp5 N-terminal ISU55_00305 IPR037026 Vgr protein, OB-fold domain superfamily ISU55_00305 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ISU55_00320 IPR001826 RHS protein ISU55_00320 IPR022385 Rhs repeat-associated core ISU55_00320 IPR006530 YD repeat ISU55_00320 IPR031325 RHS repeat ISU55_00350 IPR006531 Gp5 N-terminal ISU55_00350 IPR037026 Vgr protein, OB-fold domain superfamily ISU55_00350 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ISU55_00350 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ISU55_00360 IPR031325 RHS repeat ISU55_00360 IPR006530 YD repeat ISU55_00360 IPR022385 Rhs repeat-associated core ISU55_00360 IPR001826 RHS protein ISU55_00380 IPR004104 Oxidoreductase, C-terminal ISU55_00380 IPR036291 NAD(P)-binding domain superfamily ISU55_00380 IPR000683 Oxidoreductase, N-terminal ISU55_00385 IPR009057 Homeobox-like domain superfamily ISU55_00385 IPR011051 RmlC-like cupin domain superfamily ISU55_00385 IPR014710 RmlC-like jelly roll fold ISU55_00385 IPR003313 AraC-type arabinose-binding/dimerisation domain ISU55_00385 IPR018060 DNA binding HTH domain, AraC-type ISU55_00390 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU ISU55_00390 IPR023750 RbsD-like superfamily ISU55_00390 IPR023064 D-ribose pyranase ISU55_00395 IPR002139 Ribokinase/fructokinase ISU55_00395 IPR011611 Carbohydrate kinase PfkB ISU55_00395 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_00395 IPR029056 Ribokinase-like ISU55_00395 IPR011877 Ribokinase ISU55_00400 IPR028581 Deoxyribose-phosphate aldolase type I ISU55_00400 IPR013785 Aldolase-type TIM barrel ISU55_00400 IPR011343 Deoxyribose-phosphate aldolase ISU55_00400 IPR002915 DeoC/FbaB/ lacD aldolase ISU55_00405 IPR029039 Flavoprotein-like superfamily ISU55_00405 IPR005025 NADPH-dependent FMN reductase-like ISU55_00405 IPR020048 NADPH-dependent FMN reductase, SsuE ISU55_00410 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_00410 IPR015168 SsuA/THI5-like ISU55_00410 IPR010067 Aliphatic sulfonates-binding protein ISU55_00415 IPR036661 Luciferase-like domain superfamily ISU55_00415 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent ISU55_00415 IPR011251 Luciferase-like domain ISU55_00420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_00420 IPR035906 MetI-like superfamily ISU55_00425 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB ISU55_00425 IPR003593 AAA+ ATPase domain ISU55_00425 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00425 IPR017871 ABC transporter, conserved site ISU55_00425 IPR003439 ABC transporter-like ISU55_00435 IPR007337 RelB antitoxin/Antitoxin DinJ ISU55_00435 IPR013321 Arc-type ribbon-helix-helix ISU55_00435 IPR026262 Antitoxin DinJ ISU55_00440 IPR006043 Xanthine/uracil/vitamin C permease ISU55_00445 IPR018422 Cation/H+ exchanger, CPA1 family ISU55_00445 IPR038770 Sodium/solute symporter superfamily ISU55_00445 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria ISU55_00445 IPR006153 Cation/H+ exchanger ISU55_00455 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP ISU55_00455 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase ISU55_00455 IPR004960 Bacterial lipid A biosynthesis acyltransferase ISU55_00465 IPR017871 ABC transporter, conserved site ISU55_00465 IPR003593 AAA+ ATPase domain ISU55_00465 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00465 IPR003439 ABC transporter-like ISU55_00465 IPR015861 ABC transporter, ribose import, RbsA ISU55_00470 IPR001851 ABC transporter, permease ISU55_00480 IPR005929 Ribulokinase ISU55_00480 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_00480 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_00480 IPR000577 Carbohydrate kinase, FGGY ISU55_00485 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type ISU55_00485 IPR035474 KpsF-like, SIS domain ISU55_00485 IPR001347 Sugar isomerase (SIS) ISU55_00485 IPR000644 CBS domain ISU55_00490 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ISU55_00490 IPR036249 Thioredoxin-like superfamily ISU55_00490 IPR040079 Glutathione Transferase family ISU55_00490 IPR010987 Glutathione S-transferase, C-terminal-like ISU55_00490 IPR004045 Glutathione S-transferase, N-terminal ISU55_00505 IPR002686 Transposase IS200-like ISU55_00505 IPR036515 Transposase IS200-like superfamily ISU55_00510 IPR012156 Cold shock, CspA ISU55_00510 IPR011129 Cold shock domain ISU55_00510 IPR019844 Cold-shock (CSD) domain ISU55_00510 IPR002059 Cold-shock protein, DNA-binding ISU55_00510 IPR012340 Nucleic acid-binding, OB-fold ISU55_00515 IPR012340 Nucleic acid-binding, OB-fold ISU55_00515 IPR012156 Cold shock, CspA ISU55_00515 IPR011129 Cold shock domain ISU55_00515 IPR019844 Cold-shock (CSD) domain ISU55_00515 IPR002059 Cold-shock protein, DNA-binding ISU55_00520 IPR008816 Glycine zipper 2TM domain ISU55_00525 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ISU55_00525 IPR001279 Metallo-beta-lactamase ISU55_00530 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain ISU55_00530 IPR015815 3-hydroxyisobutyrate dehydrogenase-related ISU55_00530 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding ISU55_00530 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_00530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_00530 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site ISU55_00530 IPR036291 NAD(P)-binding domain superfamily ISU55_00535 IPR012788 4-carboxymuconolactone decarboxylase ISU55_00535 IPR003779 Carboxymuconolactone decarboxylase-like ISU55_00535 IPR029032 AhpD-like ISU55_00540 IPR005829 Sugar transporter, conserved site ISU55_00540 IPR020846 Major facilitator superfamily domain ISU55_00540 IPR004736 MFS transporter, metabolite:H symporter ISU55_00540 IPR036259 MFS transporter superfamily ISU55_00540 IPR011701 Major facilitator superfamily ISU55_00565 IPR005412 DNA-binding protein Fis ISU55_00565 IPR009057 Homeobox-like domain superfamily ISU55_00565 IPR002197 DNA binding HTH domain, Fis-type ISU55_00570 IPR001269 tRNA-dihydrouridine synthase ISU55_00570 IPR018517 tRNA-dihydrouridine synthase, conserved site ISU55_00570 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 ISU55_00570 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal ISU55_00570 IPR032887 tRNA-dihydrouridine synthase B ISU55_00570 IPR035587 DUS-like, FMN-binding domain ISU55_00570 IPR013785 Aldolase-type TIM barrel ISU55_00575 IPR004498 Ribosomal protein L11 methyltransferase ISU55_00575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_00580 IPR018212 Sodium/solute symporter, conserved site ISU55_00580 IPR038377 Sodium/glucose symporter superfamily ISU55_00580 IPR011849 Sodium/pantothenate symporter ISU55_00580 IPR001734 Sodium/solute symporter ISU55_00585 IPR010398 Protein of unknown function DUF997 ISU55_00595 IPR011054 Rudiment single hybrid motif ISU55_00595 IPR016185 Pre-ATP-grasp domain superfamily ISU55_00595 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ISU55_00595 IPR005482 Biotin carboxylase, C-terminal ISU55_00595 IPR011764 Biotin carboxylation domain ISU55_00595 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase ISU55_00595 IPR005481 Biotin carboxylase-like, N-terminal domain ISU55_00595 IPR013815 ATP-grasp fold, subdomain 1 ISU55_00595 IPR011761 ATP-grasp fold ISU55_00600 IPR001249 Acetyl-CoA biotin carboxyl carrier ISU55_00600 IPR000089 Biotin/lipoyl attachment ISU55_00600 IPR001882 Biotin-binding site ISU55_00600 IPR011053 Single hybrid motif ISU55_00605 IPR036441 Dehydroquinase, class II superfamily ISU55_00605 IPR018509 Dehydroquinase, class II, conserved site ISU55_00605 IPR001874 Dehydroquinase, class II ISU55_00610 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ ISU55_00610 IPR013130 Ferric reductase transmembrane component-like domain ISU55_00615 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily ISU55_00615 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP ISU55_00615 IPR000572 Oxidoreductase, molybdopterin-binding domain ISU55_00620 IPR014188 Acrylyl-CoA reductase AcuI ISU55_00620 IPR013154 Alcohol dehydrogenase, N-terminal ISU55_00620 IPR011032 GroES-like superfamily ISU55_00620 IPR036291 NAD(P)-binding domain superfamily ISU55_00620 IPR020843 Polyketide synthase, enoylreductase domain ISU55_00620 IPR013149 Alcohol dehydrogenase, C-terminal ISU55_00625 IPR029787 Nucleotide cyclase ISU55_00625 IPR000160 GGDEF domain ISU55_00625 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 ISU55_00625 IPR001633 EAL domain ISU55_00625 IPR035919 EAL domain superfamily ISU55_00630 IPR004753 Cell shape determining protein MreB ISU55_00635 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 ISU55_00635 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 ISU55_00635 IPR007221 Rod shape-determining protein MreC ISU55_00640 IPR007227 Cell shape-determining protein MreD ISU55_00640 IPR026034 Cell shape-determining protein MreD, proteobacterial type ISU55_00645 IPR029001 Inosine triphosphate pyrophosphatase-like ISU55_00645 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein ISU55_00650 IPR003029 S1 domain ISU55_00650 IPR012340 Nucleic acid-binding, OB-fold ISU55_00650 IPR022967 RNA-binding domain, S1 ISU55_00650 IPR004659 Ribonuclease E/G ISU55_00650 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G ISU55_00655 IPR011836 Conserved hypothetical protein CHP02099 ISU55_00655 IPR025263 Domain of unknown function DUF3971 ISU55_00655 IPR032712 AsmA-like, C-terminal ISU55_00660 IPR001110 Uncharacterised protein family UPF0012, conserved site ISU55_00660 IPR003010 Carbon-nitrogen hydrolase ISU55_00660 IPR036526 Carbon-nitrogen hydrolase superfamily ISU55_00665 IPR025502 TldD ISU55_00665 IPR036059 Metalloprotease TldD/PmbA superfamily ISU55_00665 IPR002510 Metalloprotease TldD/PmbA ISU55_00665 IPR035068 Metalloprotease TldD/PmbA, N-terminal ISU55_00670 IPR022385 Rhs repeat-associated core ISU55_00670 IPR041508 Toxin complex C-like repeat ISU55_00670 IPR025968 YwqJ-like deaminase ISU55_00675 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain ISU55_00675 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily ISU55_00675 IPR011324 Cytotoxic necrotizing factor-like, catalytic ISU55_00675 IPR022385 Rhs repeat-associated core ISU55_00675 IPR041508 Toxin complex C-like repeat ISU55_00695 IPR022044 Insecticide toxin TcdB middle/C-terminal ISU55_00695 IPR003284 Salmonella virulence plasmid 65kDa B protein ISU55_00695 IPR022045 Insecticide toxin TcdB middle/N-terminal ISU55_00700 IPR003593 AAA+ ATPase domain ISU55_00700 IPR002611 IstB-like ATP-binding protein ISU55_00700 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00700 IPR001270 ClpA/B family ISU55_00705 IPR036397 Ribonuclease H superfamily ISU55_00705 IPR012337 Ribonuclease H-like superfamily ISU55_00705 IPR001584 Integrase, catalytic core ISU55_00705 IPR017894 HTH domain, IS21 transposase-type ISU55_00705 IPR006120 Resolvase, HTH domain ISU55_00710 IPR041079 Neuraminidase-like domain ISU55_00710 IPR040840 Tc toxin complex TcA, C-terminal TcB-binding domain ISU55_00720 IPR036390 Winged helix DNA-binding domain superfamily ISU55_00720 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_00720 IPR000847 Transcription regulator HTH, LysR ISU55_00720 IPR005119 LysR, substrate-binding ISU55_00725 IPR005119 LysR, substrate-binding ISU55_00725 IPR000847 Transcription regulator HTH, LysR ISU55_00725 IPR036390 Winged helix DNA-binding domain superfamily ISU55_00725 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_00730 IPR012451 Protein of unknown function DUF1656 ISU55_00735 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ISU55_00735 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA ISU55_00735 IPR006143 RND efflux pump, membrane fusion protein ISU55_00740 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB ISU55_00740 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein ISU55_00755 IPR035905 Barstar-like superfamily ISU55_00755 IPR000468 Barstar (barnase inhibitor) ISU55_00760 IPR006839 Ribosome-associated, YjgA ISU55_00760 IPR023153 PSPTO4464-like domain superfamily ISU55_00765 IPR036059 Metalloprotease TldD/PmbA superfamily ISU55_00765 IPR002510 Metalloprotease TldD/PmbA ISU55_00765 IPR035068 Metalloprotease TldD/PmbA, N-terminal ISU55_00775 IPR010980 Cytochrome c/b562 ISU55_00775 IPR009155 Cytochrome b562 ISU55_00780 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain ISU55_00780 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal ISU55_00780 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily ISU55_00780 IPR023459 Transcription elongation factor GreA/GreB family ISU55_00780 IPR028625 Regulator of nucleoside diphosphate kinase ISU55_00785 IPR012769 Trehalose-6-phosphate hydrolase ISU55_00785 IPR013780 Glycosyl hydrolase, all-beta ISU55_00785 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ISU55_00785 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) ISU55_00785 IPR017853 Glycoside hydrolase superfamily ISU55_00790 IPR003352 Phosphotransferase system, EIIC ISU55_00790 IPR036878 Glucose permease domain IIB ISU55_00790 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component ISU55_00790 IPR011296 Phosphotransferase system, trehalose-specific IIBC component ISU55_00790 IPR001996 Phosphotransferase system, IIB component, type 1 ISU55_00790 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ISU55_00790 IPR013013 Phosphotransferase system, EIIC component, type 1 ISU55_00795 IPR012771 Trehalose operon repressor ISU55_00795 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_00795 IPR000843 LacI-type HTH domain ISU55_00795 IPR028082 Periplasmic binding protein-like I ISU55_00805 IPR006056 RidA family ISU55_00805 IPR019897 RidA, conserved site ISU55_00805 IPR035959 RutC-like superfamily ISU55_00805 IPR006175 YjgF/YER057c/UK114 family ISU55_00810 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily ISU55_00810 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily ISU55_00810 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal ISU55_00810 IPR002801 Aspartate transcarbamylase regulatory subunit ISU55_00810 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal ISU55_00815 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain ISU55_00815 IPR002082 Aspartate carbamoyltransferase ISU55_00815 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily ISU55_00815 IPR006130 Aspartate/ornithine carbamoyltransferase ISU55_00815 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding ISU55_00820 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ISU55_00820 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ISU55_00820 IPR035895 HPr-like superfamily ISU55_00820 IPR000032 Phosphocarrier protein HPr-like ISU55_00825 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00825 IPR005337 RapZ-like family ISU55_00830 IPR002178 PTS EIIA type-2 domain ISU55_00830 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN ISU55_00830 IPR016152 Phosphotransferase/anion transporter ISU55_00840 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ISU55_00840 IPR007634 RNA polymerase sigma factor 54, DNA-binding ISU55_00840 IPR007046 RNA polymerase sigma factor 54, core-binding domain ISU55_00840 IPR000394 RNA polymerase sigma factor 54 ISU55_00845 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ISU55_00845 IPR003593 AAA+ ATPase domain ISU55_00845 IPR017871 ABC transporter, conserved site ISU55_00845 IPR003439 ABC transporter-like ISU55_00845 IPR030921 LPS export ABC transporter, ATP-binding protein LptB ISU55_00845 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00850 IPR005653 Organic solvent tolerance-like, N-terminal ISU55_00850 IPR014340 Lipopolysaccharide export system protein LptA ISU55_00855 IPR010664 Lipopolysaccharide assembly, LptC-related ISU55_00855 IPR026265 Lipopolysaccharide export system protein LptC ISU55_00860 IPR036412 HAD-like superfamily ISU55_00860 IPR010023 KdsC family ISU55_00860 IPR023214 HAD superfamily ISU55_00865 IPR001347 Sugar isomerase (SIS) ISU55_00865 IPR035474 KpsF-like, SIS domain ISU55_00865 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type ISU55_00865 IPR000644 CBS domain ISU55_00870 IPR004837 Sodium/calcium exchanger membrane region ISU55_00870 IPR004481 Sodium/potassium/calcium exchanger ISU55_00875 IPR003593 AAA+ ATPase domain ISU55_00875 IPR003439 ABC transporter-like ISU55_00875 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00875 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl ISU55_00875 IPR017871 ABC transporter, conserved site ISU55_00880 IPR030802 ABC transporter permease MalE ISU55_00880 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ISU55_00885 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD ISU55_00885 IPR003399 Mce/MlaD ISU55_00890 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ISU55_00890 IPR042245 Tgt2/MlaC superfamily ISU55_00895 IPR036513 STAS domain superfamily ISU55_00895 IPR002645 STAS domain ISU55_00900 IPR036065 BolA-like superfamily ISU55_00900 IPR002634 BolA protein ISU55_00905 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase ISU55_00905 IPR036968 Enolpyruvate transferase domain superfamily ISU55_00905 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta ISU55_00905 IPR001986 Enolpyruvate transferase domain ISU55_00910 IPR001940 Peptidase S1C ISU55_00910 IPR009003 Peptidase S1, PA clan ISU55_00910 IPR001478 PDZ domain ISU55_00910 IPR036034 PDZ superfamily ISU55_00910 IPR011783 Peptidase S1C, DegS ISU55_00915 IPR002686 Transposase IS200-like ISU55_00915 IPR036515 Transposase IS200-like superfamily ISU55_00920 IPR001940 Peptidase S1C ISU55_00920 IPR036034 PDZ superfamily ISU55_00920 IPR011782 Peptidase S1C, Do ISU55_00920 IPR001478 PDZ domain ISU55_00920 IPR009003 Peptidase S1, PA clan ISU55_00925 IPR009386 Protein of unknown function DUF1043 ISU55_00930 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_00930 IPR030870 Cell division protein ZapE ISU55_00930 IPR005654 ATPase, AFG1-like ISU55_00935 IPR036899 Ribosomal protein L13 superfamily ISU55_00935 IPR023563 Ribosomal protein L13, conserved site ISU55_00935 IPR005823 Ribosomal protein L13, bacterial-type ISU55_00935 IPR005822 Ribosomal protein L13 ISU55_00940 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_00940 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_00940 IPR000754 Ribosomal protein S9 ISU55_00940 IPR023035 Ribosomal protein S9, bacterial/plastid ISU55_00940 IPR020574 Ribosomal protein S9, conserved site ISU55_00950 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ISU55_00950 IPR010987 Glutathione S-transferase, C-terminal-like ISU55_00950 IPR034341 Stringent starvation protein A, N-terminal ISU55_00950 IPR004045 Glutathione S-transferase, N-terminal ISU55_00950 IPR004046 Glutathione S-transferase, C-terminal ISU55_00950 IPR036249 Thioredoxin-like superfamily ISU55_00950 IPR040079 Glutathione Transferase family ISU55_00955 IPR007481 Stringent starvation protein B ISU55_00955 IPR036760 SspB-like superfamily ISU55_00965 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_00965 IPR023753 FAD/NAD(P)-binding domain ISU55_00965 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 ISU55_00965 IPR009051 Alpha-helical ferredoxin ISU55_00965 IPR028261 Dihydroprymidine dehydrogenase domain II ISU55_00965 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_00970 IPR013785 Aldolase-type TIM barrel ISU55_00970 IPR017932 Glutamine amidotransferase type 2 domain ISU55_00970 IPR029055 Nucleophile aminohydrolases, N-terminal ISU55_00970 IPR002489 Glutamate synthase, alpha subunit, C-terminal ISU55_00970 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily ISU55_00970 IPR006982 Glutamate synthase, central-N ISU55_00970 IPR002932 Glutamate synthase domain ISU55_00975 IPR032432 Radical SAM, C-terminal extension ISU55_00975 IPR006638 Elp3/MiaB/NifB ISU55_00975 IPR007197 Radical SAM ISU55_00975 IPR005911 Protein YhcC-like ISU55_00975 IPR039661 ELP3/YhcC ISU55_00975 IPR023404 Radical SAM, alpha/beta horseshoe ISU55_00980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_00980 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily ISU55_00980 IPR011006 CheY-like superfamily ISU55_00980 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_00980 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ISU55_00980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_00980 IPR005467 Histidine kinase domain ISU55_00980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_00980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_00980 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB ISU55_00980 IPR036641 HPT domain superfamily ISU55_00980 IPR000014 PAS domain ISU55_00980 IPR000700 PAS-associated, C-terminal ISU55_00980 IPR035965 PAS domain superfamily ISU55_00980 IPR001789 Signal transduction response regulator, receiver domain ISU55_00980 IPR013767 PAS fold ISU55_00980 IPR040642 Histidine kinase receptor ArcB, transmembrane domain ISU55_00985 IPR029062 Class I glutamine amidotransferase-like ISU55_00985 IPR026041 Glyoxalase ElbB ISU55_00990 IPR011812 Biosynthetic peptidoglycan transglycosylase ISU55_00990 IPR036950 Penicillin binding protein transglycosylase domain ISU55_00990 IPR023346 Lysozyme-like domain superfamily ISU55_00990 IPR001264 Glycosyl transferase, family 51 ISU55_00995 IPR007055 BON domain ISU55_00995 IPR014004 Transport-associated and nodulation domain, bacteria ISU55_01000 IPR001347 Sugar isomerase (SIS) ISU55_01000 IPR023070 DnaA initiator-associating protein ISU55_01000 IPR035461 GmhA/DiaA ISU55_01005 IPR011335 Restriction endonuclease type II-like ISU55_01005 IPR011856 tRNA endonuclease-like domain superfamily ISU55_01005 IPR003509 Uncharacterised protein family UPF0102 ISU55_01010 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_01010 IPR028082 Periplasmic binding protein-like I ISU55_01010 IPR007443 Penicillin-binding protein activator LpoA ISU55_01015 IPR008189 rRNA small subunit methyltransferase I ISU55_01015 IPR014776 Tetrapyrrole methylase, subdomain 2 ISU55_01015 IPR014777 Tetrapyrrole methylase, subdomain 1 ISU55_01015 IPR035996 Tetrapyrrole methylase superfamily ISU55_01015 IPR018063 SAM-dependent methyltransferase RsmI, conserved site ISU55_01015 IPR000878 Tetrapyrrole methylase ISU55_01025 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain ISU55_01025 IPR012093 Pirin ISU55_01025 IPR003829 Pirin, N-terminal domain ISU55_01025 IPR014710 RmlC-like jelly roll fold ISU55_01025 IPR011051 RmlC-like cupin domain superfamily ISU55_01030 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_01030 IPR000847 Transcription regulator HTH, LysR ISU55_01030 IPR005119 LysR, substrate-binding ISU55_01030 IPR036390 Winged helix DNA-binding domain superfamily ISU55_01040 IPR001270 ClpA/B family ISU55_01040 IPR002611 IstB-like ATP-binding protein ISU55_01040 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01040 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_01040 IPR003593 AAA+ ATPase domain ISU55_01045 IPR017894 HTH domain, IS21 transposase-type ISU55_01045 IPR001584 Integrase, catalytic core ISU55_01045 IPR006120 Resolvase, HTH domain ISU55_01045 IPR012337 Ribonuclease H-like superfamily ISU55_01045 IPR036397 Ribonuclease H superfamily ISU55_01080 IPR025997 Periplasmic binding protein ISU55_01080 IPR028082 Periplasmic binding protein-like I ISU55_01080 IPR033893 ABC transporter periplasmic-binding protein YtfQ ISU55_01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01085 IPR003439 ABC transporter-like ISU55_01085 IPR017871 ABC transporter, conserved site ISU55_01085 IPR003593 AAA+ ATPase domain ISU55_01090 IPR001851 ABC transporter, permease ISU55_01095 IPR001851 ABC transporter, permease ISU55_01100 IPR005119 LysR, substrate-binding ISU55_01100 IPR020890 Transcription regulator HTH, HdfR ISU55_01100 IPR000847 Transcription regulator HTH, LysR ISU55_01100 IPR036390 Winged helix DNA-binding domain superfamily ISU55_01100 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_01105 IPR007335 Protein of unknown function DUF413 ISU55_01110 IPR000523 Magnesium chelatase ChlI domain ISU55_01110 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_01110 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_01110 IPR003593 AAA+ ATPase domain ISU55_01110 IPR004482 Mg chelatase-related protein ISU55_01110 IPR025158 Mg chelatase-related protein, C-terminal domain ISU55_01110 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01115 IPR012567 IlvGEDA operon leader peptide ISU55_01120 IPR012000 Thiamine pyrophosphate enzyme, central domain ISU55_01120 IPR000399 TPP-binding enzyme, conserved site ISU55_01120 IPR029061 Thiamin diphosphate-binding fold ISU55_01120 IPR029035 DHS-like NAD/FAD-binding domain superfamily ISU55_01120 IPR039368 Acetolactate synthase large subunit, TPP binding domain ISU55_01120 IPR012846 Acetolactate synthase, large subunit, biosynthetic ISU55_01120 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ISU55_01120 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ISU55_01125 IPR002912 ACT domain ISU55_01130 IPR018300 Aminotransferase, class IV, conserved site ISU55_01130 IPR033939 Branched-chain aminotransferase ISU55_01130 IPR036038 Aminotransferase-like, PLP-dependent enzymes ISU55_01130 IPR001544 Aminotransferase class IV ISU55_01130 IPR005785 Branched-chain amino acid aminotransferase I ISU55_01135 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site ISU55_01135 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase ISU55_01135 IPR004404 Dihydroxy-acid dehydratase ISU55_01135 IPR042096 Dihydroxy-acid dehydratase, C-terminal ISU55_01135 IPR037237 IlvD/EDD, N-terminal domain ISU55_01140 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_01140 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_01140 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site ISU55_01140 IPR038110 Threonine dehydratase, ACT-like domain superfamily ISU55_01140 IPR005787 Threonine dehydratase, biosynthetic ISU55_01140 IPR001721 Threonine dehydratase, ACT-like domain ISU55_01175 IPR036390 Winged helix DNA-binding domain superfamily ISU55_01175 IPR000847 Transcription regulator HTH, LysR ISU55_01175 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_01175 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain ISU55_01175 IPR005119 LysR, substrate-binding ISU55_01180 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_01180 IPR013023 Ketol-acid reductoisomerase ISU55_01180 IPR000506 Ketol-acid reductoisomerase, C-terminal ISU55_01180 IPR013116 Ketol-acid reductoisomerase, N-terminal ISU55_01180 IPR036291 NAD(P)-binding domain superfamily ISU55_01180 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_01200 IPR037146 Colicin/pyocin, DNase domain superfamily ISU55_01200 IPR003615 HNH nuclease ISU55_01205 IPR035900 Colicin E immunity protein superfamily ISU55_01205 IPR000290 Colicin immunity protein/pyocin immunity protein ISU55_01210 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_01210 IPR018046 Pili assembly chaperone, conserved site ISU55_01210 IPR016147 Pili assembly chaperone, N-terminal ISU55_01210 IPR001829 Pili assembly chaperone, bacterial ISU55_01210 IPR008962 PapD-like superfamily ISU55_01210 IPR016148 Pili assembly chaperone, C-terminal ISU55_01210 IPR013783 Immunoglobulin-like fold ISU55_01220 IPR025885 PapC, N-terminal domain ISU55_01220 IPR025949 PapC-like, C-terminal domain ISU55_01220 IPR042186 Outer membrane usher protein FimD, plug domain ISU55_01220 IPR000015 Outer membrane usher protein ISU55_01220 IPR018030 Fimbrial membrane usher, conserved site ISU55_01220 IPR037224 PapC, N-terminal domain superfamily ISU55_01225 IPR008962 PapD-like superfamily ISU55_01225 IPR001829 Pili assembly chaperone, bacterial ISU55_01225 IPR013783 Immunoglobulin-like fold ISU55_01225 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_01225 IPR018046 Pili assembly chaperone, conserved site ISU55_01225 IPR016147 Pili assembly chaperone, N-terminal ISU55_01225 IPR016148 Pili assembly chaperone, C-terminal ISU55_01235 IPR001207 Transposase, mutator type ISU55_01245 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ISU55_01245 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ISU55_01255 IPR034739 UvrD/AddA helicase, N-terminal ISU55_01255 IPR014016 UvrD-like helicase, ATP-binding domain ISU55_01255 IPR005752 ATP-dependent DNA helicase Rep ISU55_01255 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01255 IPR000212 DNA helicase, UvrD/REP type ISU55_01255 IPR014017 UvrD-like DNA helicase, C-terminal ISU55_01255 IPR013986 DExx box DNA helicase domain superfamily ISU55_01265 IPR014014 RNA helicase, DEAD-box type, Q motif ISU55_01265 IPR023554 ATP-dependent RNA helicase RhlB type ISU55_01265 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ISU55_01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01265 IPR011545 DEAD/DEAH box helicase domain ISU55_01265 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_01265 IPR001650 Helicase, C-terminal ISU55_01270 IPR017937 Thioredoxin, conserved site ISU55_01270 IPR036249 Thioredoxin-like superfamily ISU55_01270 IPR005746 Thioredoxin ISU55_01270 IPR013766 Thioredoxin domain ISU55_01275 IPR036269 Rho termination factor, N-terminal domain superfamily ISU55_01275 IPR011113 Rho termination factor, RNA-binding domain ISU55_01275 IPR003593 AAA+ ATPase domain ISU55_01275 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01275 IPR041703 Transcription termination factor Rho, ATP binding domain ISU55_01275 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ISU55_01275 IPR011112 Rho termination factor, N-terminal ISU55_01275 IPR011129 Cold shock domain ISU55_01275 IPR004665 Transcription termination factor Rho ISU55_01275 IPR012340 Nucleic acid-binding, OB-fold ISU55_01280 IPR000715 Glycosyl transferase, family 4 ISU55_01280 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase ISU55_01285 IPR003856 Polysaccharide chain length determinant N-terminal domain ISU55_01285 IPR032895 ECA polysaccharide chain length modulation protein WzzE ISU55_01290 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB ISU55_01290 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like ISU55_01290 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain ISU55_01295 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC ISU55_01295 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal ISU55_01295 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_01295 IPR036291 NAD(P)-binding domain superfamily ISU55_01295 IPR017476 UDP-glucose/GDP-mannose dehydrogenase ISU55_01295 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal ISU55_01295 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation ISU55_01295 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily ISU55_01295 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase ISU55_01300 IPR036291 NAD(P)-binding domain superfamily ISU55_01300 IPR005888 dTDP-glucose 4,6-dehydratase ISU55_01300 IPR016040 NAD(P)-binding domain ISU55_01305 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_01305 IPR005835 Nucleotidyl transferase domain ISU55_01305 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form ISU55_01310 IPR002110 Ankyrin repeat ISU55_01310 IPR020683 Ankyrin repeat-containing domain ISU55_01310 IPR016181 Acyl-CoA N-acyltransferase ISU55_01310 IPR000182 GNAT domain ISU55_01310 IPR012752 dTDP-fucosamine acetyltransferase WecD ISU55_01315 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_01315 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like ISU55_01315 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_01315 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_01315 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ISU55_01315 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE ISU55_01320 IPR032896 Lipid III flippase WzxE ISU55_01320 IPR002797 Polysaccharide biosynthesis protein ISU55_01325 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase ISU55_01330 IPR010691 Probable ECA polymerase WzyE ISU55_01335 IPR004629 Glycosyl transferase WecB/TagA/CpsF ISU55_01335 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase ISU55_01340 IPR004840 Amino acid permease, conserved site ISU55_01340 IPR004841 Amino acid permease/ SLC12A domain ISU55_01365 IPR002686 Transposase IS200-like ISU55_01365 IPR036515 Transposase IS200-like superfamily ISU55_01370 IPR013105 Tetratricopeptide repeat 2 ISU55_01370 IPR010817 HemY, N-terminal ISU55_01370 IPR013026 Tetratricopeptide repeat-containing domain ISU55_01370 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_01370 IPR005254 Heme biosynthesis-associated TPR protein ISU55_01370 IPR019734 Tetratricopeptide repeat ISU55_01375 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX ISU55_01380 IPR039793 Uroporphyrinogen-III synthase ISU55_01380 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily ISU55_01380 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase ISU55_01385 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily ISU55_01385 IPR022418 Porphobilinogen deaminase, C-terminal ISU55_01385 IPR022417 Porphobilinogen deaminase, N-terminal ISU55_01385 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site ISU55_01385 IPR000860 Porphobilinogen deaminase ISU55_01395 IPR000274 Adenylate cyclase, class-I ISU55_01395 IPR024686 Adenylate cyclase class-I, conserved site ISU55_01395 IPR024685 Adenylate cyclase class-I, N-terminal domain ISU55_01400 IPR002908 Frataxin/CyaY ISU55_01400 IPR036524 Frataxin/CyaY superfamily ISU55_01400 IPR020895 Frataxin conserved site ISU55_01405 IPR032831 Prokaryotic lipoprotein-attachment site ISU55_01410 IPR018510 Diaminopimelate epimerase, active site ISU55_01410 IPR001653 Diaminopimelate epimerase, DapF ISU55_01415 IPR029016 GAF-like domain superfamily ISU55_01415 IPR007435 Protein of unknown function DUF484 ISU55_01420 IPR002104 Integrase, catalytic domain ISU55_01420 IPR004107 Integrase, SAM-like, N-terminal ISU55_01420 IPR011931 Tyrosine recombinase XerC ISU55_01420 IPR023009 Tyrosine recombinase XerC/XerD ISU55_01420 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_01420 IPR013762 Integrase-like, catalytic domain superfamily ISU55_01420 IPR010998 Integrase/recombinase, N-terminal ISU55_01425 IPR036412 HAD-like superfamily ISU55_01425 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_01425 IPR006439 HAD hydrolase, subfamily IA ISU55_01425 IPR023214 HAD superfamily ISU55_01430 IPR014017 UvrD-like DNA helicase, C-terminal ISU55_01430 IPR034739 UvrD/AddA helicase, N-terminal ISU55_01430 IPR013986 DExx box DNA helicase domain superfamily ISU55_01430 IPR014016 UvrD-like helicase, ATP-binding domain ISU55_01430 IPR005753 DNA helicase, ATP-dependent, UvrD type ISU55_01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01430 IPR000212 DNA helicase, UvrD/REP type ISU55_01440 IPR008322 Uncharacterised protein family UPF0261 ISU55_01445 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_01445 IPR013785 Aldolase-type TIM barrel ISU55_01445 IPR009215 TIM-barrel domain, IGPS-like ISU55_01450 IPR004488 Magnesium/cobalt transport protein CorA ISU55_01450 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB ISU55_01455 IPR004626 RarD protein ISU55_01455 IPR000620 EamA domain ISU55_01460 IPR003736 Phenylacetic acid degradation-related domain ISU55_01460 IPR029069 HotDog domain superfamily ISU55_01460 IPR006683 Thioesterase domain ISU55_01465 IPR003187 Phospholipase A1 ISU55_01465 IPR036541 Phospholipase A1 superfamily ISU55_01470 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01470 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ISU55_01470 IPR010997 HRDC-like superfamily ISU55_01470 IPR002121 HRDC domain ISU55_01470 IPR018982 RQC domain ISU55_01470 IPR001650 Helicase, C-terminal ISU55_01470 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_01470 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial ISU55_01470 IPR004589 DNA helicase, ATP-dependent, RecQ type ISU55_01470 IPR011545 DEAD/DEAH box helicase domain ISU55_01470 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_01475 IPR004778 Homoserine/Threonine efflux protein ISU55_01475 IPR001123 Amino acid exporter protein, LeuE-type ISU55_01480 IPR004778 Homoserine/Threonine efflux protein ISU55_01480 IPR001123 Amino acid exporter protein, LeuE-type ISU55_01485 IPR022742 Serine aminopeptidase, S33 ISU55_01485 IPR029058 Alpha/Beta hydrolase fold ISU55_01490 IPR023214 HAD superfamily ISU55_01490 IPR036412 HAD-like superfamily ISU55_01490 IPR000150 Cof family ISU55_01490 IPR006379 HAD-superfamily hydrolase, subfamily IIB ISU55_01500 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ISU55_01500 IPR030395 Glycerophosphodiester phosphodiesterase domain ISU55_01505 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_01505 IPR006076 FAD dependent oxidoreductase ISU55_01505 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily ISU55_01505 IPR007419 BFD-like [2Fe-2S]-binding domain ISU55_01505 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase ISU55_01505 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit ISU55_01510 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ISU55_01510 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_01510 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit ISU55_01515 IPR004017 Cysteine-rich domain ISU55_01515 IPR009051 Alpha-helical ferredoxin ISU55_01515 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_01515 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit ISU55_01515 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_01520 IPR014894 Protein DcrB ISU55_01520 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich ISU55_01525 IPR003744 Queuosine precursor transporter ISU55_01530 IPR022931 Sulfur carrier protein TusA ISU55_01530 IPR001455 TusA-like domain ISU55_01530 IPR036868 TusA-like domain superfamily ISU55_01535 IPR023298 P-type ATPase, transmembrane domain superfamily ISU55_01535 IPR023299 P-type ATPase, cytoplasmic domain N ISU55_01535 IPR018303 P-type ATPase, phosphorylation site ISU55_01535 IPR036412 HAD-like superfamily ISU55_01535 IPR017969 Heavy-metal-associated, conserved site ISU55_01535 IPR036163 Heavy metal-associated domain superfamily ISU55_01535 IPR001757 P-type ATPase ISU55_01535 IPR027256 P-type ATPase, subfamily IB ISU55_01535 IPR006121 Heavy metal-associated domain, HMA ISU55_01535 IPR023214 HAD superfamily ISU55_01535 IPR008250 P-type ATPase, A domain superfamily ISU55_01540 IPR012506 YhhN-like ISU55_01555 IPR009525 Protein of unknown function DUF1145 ISU55_01560 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_01560 IPR004398 RNA methyltransferase, RsmD ISU55_01560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_01565 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily ISU55_01565 IPR036225 SRP/SRP receptor, N-terminal ISU55_01565 IPR004390 Signal-recognition particle receptor FtsY ISU55_01565 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01565 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ISU55_01565 IPR003593 AAA+ ATPase domain ISU55_01565 IPR003593 AAA+ ATPase domain ISU55_01565 IPR013822 Signal recognition particle SRP54, helical bundle ISU55_01565 IPR004390 Signal-recognition particle receptor FtsY ISU55_01565 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01565 IPR036225 SRP/SRP receptor, N-terminal ISU55_01565 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ISU55_01565 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily ISU55_01565 IPR013822 Signal recognition particle SRP54, helical bundle ISU55_01570 IPR017871 ABC transporter, conserved site ISU55_01570 IPR003439 ABC transporter-like ISU55_01570 IPR003593 AAA+ ATPase domain ISU55_01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01570 IPR005286 Cell division protein FtsE, ATP-binding ISU55_01575 IPR003838 ABC transporter permease protein domain ISU55_01575 IPR004513 Cell division protein FtsX ISU55_01575 IPR040690 FtsX, extracellular domain ISU55_01580 IPR000943 RNA polymerase sigma-70 ISU55_01580 IPR009042 RNA polymerase sigma-70 region 1.2 ISU55_01580 IPR007627 RNA polymerase sigma-70 region 2 ISU55_01580 IPR014284 RNA polymerase sigma-70 like domain ISU55_01580 IPR007630 RNA polymerase sigma-70 region 4 ISU55_01580 IPR013325 RNA polymerase sigma factor, region 2 ISU55_01580 IPR013324 RNA polymerase sigma factor, region 3/4-like ISU55_01580 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria ISU55_01580 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_01585 IPR036515 Transposase IS200-like superfamily ISU55_01585 IPR002686 Transposase IS200-like ISU55_01590 IPR040448 PanZ, acetyltransferase (GNAT) domain ISU55_01590 IPR032900 PanD regulatory factor PanZ ISU55_01590 IPR000182 GNAT domain ISU55_01590 IPR016181 Acyl-CoA N-acyltransferase ISU55_01595 IPR028082 Periplasmic binding protein-like I ISU55_01595 IPR000709 Leu/Ile/Val-binding protein ISU55_01595 IPR028081 Leucine-binding protein domain ISU55_01600 IPR001851 ABC transporter, permease ISU55_01605 IPR001851 ABC transporter, permease ISU55_01605 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal ISU55_01610 IPR003593 AAA+ ATPase domain ISU55_01610 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ISU55_01610 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01610 IPR003439 ABC transporter-like ISU55_01610 IPR017871 ABC transporter, conserved site ISU55_01615 IPR003439 ABC transporter-like ISU55_01615 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein ISU55_01615 IPR017871 ABC transporter, conserved site ISU55_01615 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01615 IPR003593 AAA+ ATPase domain ISU55_01655 IPR006059 Bacterial extracellular solute-binding protein ISU55_01655 IPR006061 Solute-binding family 1, conserved site ISU55_01660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_01660 IPR035906 MetI-like superfamily ISU55_01665 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_01665 IPR035906 MetI-like superfamily ISU55_01665 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE ISU55_01670 IPR017871 ABC transporter, conserved site ISU55_01670 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_01670 IPR040582 MalK, OB fold domain ISU55_01670 IPR003439 ABC transporter-like ISU55_01670 IPR003593 AAA+ ATPase domain ISU55_01670 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC ISU55_01670 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01675 IPR030395 Glycerophosphodiester phosphodiesterase domain ISU55_01675 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ISU55_01680 IPR004776 Membrane transport protein ISU55_01685 IPR004779 Carboxylate/Amino Acid/Amine Transporter ISU55_01685 IPR000620 EamA domain ISU55_01690 IPR005119 LysR, substrate-binding ISU55_01690 IPR036390 Winged helix DNA-binding domain superfamily ISU55_01690 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_01690 IPR000847 Transcription regulator HTH, LysR ISU55_01690 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain ISU55_01695 IPR006276 Cobalamin-independent methionine synthase ISU55_01695 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal ISU55_01695 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal ISU55_01695 IPR038071 UROD/MetE-like superfamily ISU55_01700 IPR002925 Dienelactone hydrolase ISU55_01700 IPR029058 Alpha/Beta hydrolase fold ISU55_01705 IPR035994 Nucleoside phosphorylase superfamily ISU55_01705 IPR000845 Nucleoside phosphorylase domain ISU55_01705 IPR010058 Uridine phosphorylase ISU55_01705 IPR018016 Nucleoside phosphorylase, conserved site ISU55_01715 IPR025299 CstA, C-terminal domain ISU55_01715 IPR003706 CstA, N-terminal domain ISU55_01720 IPR032816 SNARE associated Golgi protein ISU55_01720 IPR032818 DedA family ISU55_01725 IPR003798 DNA recombination RmuC ISU55_01730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_01730 IPR004033 UbiE/COQ5 methyltransferase ISU55_01730 IPR023576 UbiE/COQ5 methyltransferase, conserved site ISU55_01735 IPR036527 SCP2 sterol-binding domain superfamily ISU55_01735 IPR003033 SCP2 sterol-binding domain ISU55_01735 IPR038989 Ubiquinone biosynthesis protein UbiJ ISU55_01740 IPR011009 Protein kinase-like domain superfamily ISU55_01740 IPR010232 Probable protein kinase UbiB ISU55_01740 IPR004147 UbiB domain ISU55_01745 IPR006312 Sec-independent protein translocase protein TatA/E ISU55_01745 IPR003369 Sec-independent protein translocase protein TatA/B/E ISU55_01750 IPR018448 Twin-arginine translocation protein TatB ISU55_01755 IPR002033 Sec-independent periplasmic protein translocase TatC ISU55_01755 IPR019820 Sec-independent periplasmic protein translocase, conserved site ISU55_01765 IPR036397 Ribonuclease H superfamily ISU55_01765 IPR012337 Ribonuclease H-like superfamily ISU55_01765 IPR006120 Resolvase, HTH domain ISU55_01765 IPR001584 Integrase, catalytic core ISU55_01765 IPR017894 HTH domain, IS21 transposase-type ISU55_01770 IPR003593 AAA+ ATPase domain ISU55_01770 IPR001270 ClpA/B family ISU55_01770 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_01770 IPR002611 IstB-like ATP-binding protein ISU55_01770 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01775 IPR001130 TatD family ISU55_01775 IPR032466 Metal-dependent hydrolase ISU55_01775 IPR024918 3'-5' ssDNA/RNA exonuclease TatD ISU55_01775 IPR018228 Deoxyribonuclease, TatD-related, conserved site ISU55_01780 IPR001731 Delta-aminolevulinic acid dehydratase ISU55_01780 IPR013785 Aldolase-type TIM barrel ISU55_01780 IPR030656 Delta-aminolevulinic acid dehydratase, active site ISU55_01785 IPR006645 NusG, N-terminal ISU55_01785 IPR036735 NusG, N-terminal domain superfamily ISU55_01785 IPR010215 Transcription antitermination protein RfaH ISU55_01790 IPR002830 UbiD decarboxylyase family ISU55_01790 IPR023677 UbiD decarboxylyase, bacteria ISU55_01795 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_01795 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ISU55_01795 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_01795 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_01795 IPR017938 Riboflavin synthase-like beta-barrel ISU55_01800 IPR020616 Thiolase, N-terminal ISU55_01800 IPR020613 Thiolase, conserved site ISU55_01800 IPR020617 Thiolase, C-terminal ISU55_01800 IPR020610 Thiolase, active site ISU55_01800 IPR020615 Thiolase, acyl-enzyme intermediate active site ISU55_01800 IPR016039 Thiolase-like ISU55_01800 IPR012805 Acetyl-CoA C-acyltransferase FadA ISU55_01800 IPR002155 Thiolase ISU55_01805 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ISU55_01805 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ISU55_01805 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ISU55_01805 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_01805 IPR036291 NAD(P)-binding domain superfamily ISU55_01805 IPR029045 ClpP/crotonase-like domain superfamily ISU55_01805 IPR012799 Fatty oxidation complex, alpha subunit FadB ISU55_01805 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ISU55_01805 IPR001753 Enoyl-CoA hydratase/isomerase ISU55_01810 IPR022846 Xaa-Pro dipeptidase ISU55_01810 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ISU55_01810 IPR036005 Creatinase/aminopeptidase-like ISU55_01810 IPR000994 Peptidase M24 ISU55_01810 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ISU55_01820 IPR036515 Transposase IS200-like superfamily ISU55_01820 IPR002686 Transposase IS200-like ISU55_01830 IPR004772 TrkH potassium transport family ISU55_01830 IPR003445 Cation transporter ISU55_01835 IPR008254 Flavodoxin/nitric oxide synthase ISU55_01835 IPR001226 Flavodoxin, conserved site ISU55_01835 IPR026816 Flavodoxin domain ISU55_01835 IPR029039 Flavoprotein-like superfamily ISU55_01865 IPR016167 FAD-binding, type PCMH, subdomain 1 ISU55_01865 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_01865 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase ISU55_01865 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal ISU55_01865 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily ISU55_01865 IPR006094 FAD linked oxidase, N-terminal ISU55_01865 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_01865 IPR016166 FAD-binding domain, PCMH-type ISU55_01870 IPR008988 Transcriptional repressor, C-terminal ISU55_01870 IPR003142 Biotin protein ligase, C-terminal ISU55_01870 IPR013196 Helix-turn-helix, type 11 ISU55_01870 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_01870 IPR036390 Winged helix DNA-binding domain superfamily ISU55_01870 IPR030855 Bifunctional ligase/repressor BirA ISU55_01870 IPR004408 Biotin--acetyl-CoA-carboxylase ligase ISU55_01870 IPR004409 Biotin operon repressor, helix-turn-helix domain ISU55_01870 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ISU55_01875 IPR006083 Phosphoribulokinase/uridine kinase ISU55_01875 IPR004566 Pantothenate kinase ISU55_01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01880 IPR000182 GNAT domain ISU55_01880 IPR016181 Acyl-CoA N-acyltransferase ISU55_01885 IPR001584 Integrase, catalytic core ISU55_01885 IPR006120 Resolvase, HTH domain ISU55_01885 IPR012337 Ribonuclease H-like superfamily ISU55_01885 IPR036397 Ribonuclease H superfamily ISU55_01885 IPR017894 HTH domain, IS21 transposase-type ISU55_01890 IPR003593 AAA+ ATPase domain ISU55_01890 IPR001270 ClpA/B family ISU55_01890 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_01890 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01890 IPR002611 IstB-like ATP-binding protein ISU55_01915 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain ISU55_01915 IPR033720 Elongation factor Tu, domain 2 ISU55_01915 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_01915 IPR031157 Tr-type G domain, conserved site ISU55_01915 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ISU55_01915 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle ISU55_01915 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ISU55_01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_01915 IPR005225 Small GTP-binding protein domain ISU55_01915 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_01915 IPR000795 Transcription factor, GTP-binding domain ISU55_01920 IPR005807 SecE subunit of protein translocation complex, bacterial-like ISU55_01920 IPR038379 SecE superfamily ISU55_01920 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit ISU55_01925 IPR014722 Ribosomal protein L2, domain 2 ISU55_01925 IPR036735 NusG, N-terminal domain superfamily ISU55_01925 IPR006645 NusG, N-terminal ISU55_01925 IPR005824 KOW ISU55_01925 IPR001062 Transcription antitermination protein, NusG ISU55_01925 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ISU55_01925 IPR008991 Translation protein SH3-like domain superfamily ISU55_01930 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ISU55_01930 IPR006519 Ribosomal protein L11, bacterial-type ISU55_01930 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ISU55_01930 IPR000911 Ribosomal protein L11/L12 ISU55_01930 IPR020783 Ribosomal protein L11, C-terminal ISU55_01930 IPR020785 Ribosomal protein L11, conserved site ISU55_01930 IPR020784 Ribosomal protein L11, N-terminal ISU55_01935 IPR002143 Ribosomal protein L1 ISU55_01935 IPR023673 Ribosomal protein L1, conserved site ISU55_01935 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ISU55_01935 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ISU55_01935 IPR005878 Ribosomal protein L1, bacterial-type ISU55_01935 IPR023674 Ribosomal protein L1-like ISU55_01940 IPR022973 Ribosomal protein L10 ISU55_01940 IPR002363 Ribosomal protein L10, eubacterial, conserved site ISU55_01940 IPR001790 Ribosomal protein L10P ISU55_01945 IPR000206 Ribosomal protein L7/L12 ISU55_01945 IPR013823 Ribosomal protein L7/L12, C-terminal ISU55_01945 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily ISU55_01945 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ISU55_01945 IPR008932 Ribosomal protein L7/L12, oligomerisation ISU55_01950 IPR014724 RNA polymerase Rpb2, OB-fold ISU55_01950 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily ISU55_01950 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type ISU55_01950 IPR007121 RNA polymerase, beta subunit, conserved site ISU55_01950 IPR007644 RNA polymerase, beta subunit, protrusion ISU55_01950 IPR007642 RNA polymerase Rpb2, domain 2 ISU55_01950 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain ISU55_01950 IPR015712 DNA-directed RNA polymerase, subunit 2 ISU55_01950 IPR037034 RNA polymerase Rpb2, domain 2 superfamily ISU55_01950 IPR007641 RNA polymerase Rpb2, domain 7 ISU55_01950 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain ISU55_01950 IPR007645 RNA polymerase Rpb2, domain 3 ISU55_01955 IPR006592 RNA polymerase, N-terminal ISU55_01955 IPR012754 DNA-directed RNA polymerase, subunit beta-prime ISU55_01955 IPR007066 RNA polymerase Rpb1, domain 3 ISU55_01955 IPR042102 RNA polymerase Rpb1, domain 3 superfamily ISU55_01955 IPR007081 RNA polymerase Rpb1, domain 5 ISU55_01955 IPR038120 RNA polymerase Rpb1, funnel domain superfamily ISU55_01955 IPR007080 RNA polymerase Rpb1, domain 1 ISU55_01955 IPR007083 RNA polymerase Rpb1, domain 4 ISU55_01955 IPR000722 RNA polymerase, alpha subunit ISU55_01960 IPR002686 Transposase IS200-like ISU55_01960 IPR036515 Transposase IS200-like superfamily ISU55_01965 IPR013785 Aldolase-type TIM barrel ISU55_01965 IPR010722 Biotin and thiamin synthesis-associated domain ISU55_01965 IPR007197 Radical SAM ISU55_01965 IPR012726 Thiazole biosynthesis ThiH ISU55_01965 IPR034428 ThiH/NocL/HydG-like ISU55_01970 IPR033983 Thiazole synthase ThiG ISU55_01970 IPR013785 Aldolase-type TIM barrel ISU55_01970 IPR008867 Thiazole synthase ISU55_01980 IPR035985 Ubiquitin-activating enzyme ISU55_01980 IPR000594 THIF-type NAD/FAD binding fold ISU55_01980 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF ISU55_01985 IPR022998 Thiamine phosphate synthase/TenI ISU55_01985 IPR036206 Thiamin phosphate synthase superfamily ISU55_01985 IPR034291 Thiamine phosphate synthase ISU55_01985 IPR013785 Aldolase-type TIM barrel ISU55_01990 IPR038521 ThiC/Bza superfamily ISU55_01990 IPR025747 ThiC-associated domain ISU55_01990 IPR037509 Phosphomethylpyrimidine synthase ISU55_01990 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B ISU55_01995 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU55_01995 IPR038309 Rsd/AlgQ superfamily ISU55_01995 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd ISU55_02000 IPR015376 Zinc ribbon, NADH pyrophosphatase ISU55_02000 IPR022925 NADH pyrophosphatase NudC ISU55_02000 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_02000 IPR020084 NUDIX hydrolase, conserved site ISU55_02000 IPR000086 NUDIX hydrolase domain ISU55_02010 IPR038071 UROD/MetE-like superfamily ISU55_02010 IPR000257 Uroporphyrinogen decarboxylase (URO-D) ISU55_02010 IPR006361 Uroporphyrinogen decarboxylase HemE ISU55_02015 IPR007581 Endonuclease V ISU55_02020 IPR023381 YP001051499.1-like domain superfamily ISU55_02020 IPR007338 Protein of unknown function DUF416 ISU55_02025 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ISU55_02025 IPR000119 Histone-like DNA-binding protein ISU55_02025 IPR020816 Histone-like DNA-binding protein, conserved site ISU55_02030 IPR016500 Uncharacterised conserved protein UCP006993 ISU55_02030 IPR010858 Protein of unknown function DUF1481 ISU55_02035 IPR020559 Phosphoribosylglycinamide synthetase, conserved site ISU55_02035 IPR011761 ATP-grasp fold ISU55_02035 IPR013815 ATP-grasp fold, subdomain 1 ISU55_02035 IPR016185 Pre-ATP-grasp domain superfamily ISU55_02035 IPR000115 Phosphoribosylglycinamide synthetase ISU55_02035 IPR020560 Phosphoribosylglycinamide synthetase, C-domain ISU55_02035 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU55_02035 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily ISU55_02035 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal ISU55_02035 IPR011054 Rudiment single hybrid motif ISU55_02040 IPR011607 Methylglyoxal synthase-like domain ISU55_02040 IPR036914 Methylglyoxal synthase-like domain superfamily ISU55_02040 IPR002695 Bifunctional purine biosynthesis protein PurH-like ISU55_02040 IPR024051 AICAR transformylase, duplicated domain superfamily ISU55_02040 IPR016193 Cytidine deaminase-like ISU55_02075 IPR002611 IstB-like ATP-binding protein ISU55_02075 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_02075 IPR001270 ClpA/B family ISU55_02075 IPR003593 AAA+ ATPase domain ISU55_02075 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02080 IPR006120 Resolvase, HTH domain ISU55_02080 IPR012337 Ribonuclease H-like superfamily ISU55_02080 IPR017894 HTH domain, IS21 transposase-type ISU55_02080 IPR001584 Integrase, catalytic core ISU55_02080 IPR036397 Ribonuclease H superfamily ISU55_02090 IPR018212 Sodium/solute symporter, conserved site ISU55_02090 IPR001734 Sodium/solute symporter ISU55_02090 IPR038377 Sodium/glucose symporter superfamily ISU55_02090 IPR014083 Cation/acetate symporter ActP ISU55_02095 IPR007436 Protein of unknown function DUF485 ISU55_02100 IPR042099 AMP-dependent synthetase-like superfamily ISU55_02100 IPR011904 Acetate-CoA ligase ISU55_02100 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain ISU55_02100 IPR025110 AMP-binding enzyme, C-terminal domain ISU55_02100 IPR020845 AMP-binding, conserved site ISU55_02100 IPR000873 AMP-dependent synthetase/ligase ISU55_02105 IPR001991 Sodium:dicarboxylate symporter ISU55_02105 IPR018107 Sodium:dicarboxylate symporter, conserved site ISU55_02105 IPR036458 Sodium:dicarboxylate symporter superfamily ISU55_02105 IPR034703 Proton/glutamate-aspartate symporter GltP ISU55_02105 IPR033380 Glutamate-aspartate symport protein GltP/GltT ISU55_02110 IPR000792 Transcription regulator LuxR, C-terminal ISU55_02110 IPR001789 Signal transduction response regulator, receiver domain ISU55_02110 IPR011006 CheY-like superfamily ISU55_02110 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_02115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_02115 IPR003660 HAMP domain ISU55_02115 IPR001789 Signal transduction response regulator, receiver domain ISU55_02115 IPR011006 CheY-like superfamily ISU55_02115 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_02115 IPR036641 HPT domain superfamily ISU55_02115 IPR019247 Histidine kinase BarA, N-terminal ISU55_02115 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_02115 IPR005467 Histidine kinase domain ISU55_02115 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_02115 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ISU55_02115 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_02120 IPR004846 Type II/III secretion system ISU55_02120 IPR003522 Type III secretion system outer membrane pore YscC/HrcC ISU55_02120 IPR005644 NolW-like ISU55_02120 IPR038591 NolW-like superfamily ISU55_02120 IPR004845 Type II secretion system GspD, conserved site ISU55_02155 IPR006182 Secretory protein YscJ/FliF ISU55_02155 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ ISU55_02170 IPR042196 FHIPEP, domain 4 ISU55_02170 IPR025505 FHIPEP conserved site ISU55_02170 IPR001712 Type III secretion system FHIPEP ISU55_02170 IPR006302 Type III secretion protein HrcV ISU55_02170 IPR042193 FHIPEP, domain 3 ISU55_02175 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ISU55_02175 IPR040627 T3SS EscN ATPase, C-terminal ISU55_02175 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02175 IPR013380 ATPase, type III secretion system, H+-transporting ISU55_02175 IPR005714 ATPase, type III secretion system, FliI/YscN ISU55_02175 IPR003593 AAA+ ATPase domain ISU55_02190 IPR036429 SpoA-like superfamily ISU55_02190 IPR001543 Surface presentation of antigen (SpoA) ISU55_02190 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb ISU55_02190 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO ISU55_02195 IPR005838 Type III secretion system inner membrane P protein ISU55_02195 IPR005773 Yop virulence translocation protein R ISU55_02200 IPR002191 Bacterial export protein family 3 ISU55_02200 IPR006306 Type III secretion protein HrpO ISU55_02205 IPR006304 Type III secretion protein SpaR/YscT ISU55_02205 IPR002010 Type III secretion system inner membrane R protein ISU55_02210 IPR029025 Type III secretion system substrate exporter, C-terminal ISU55_02210 IPR006135 Type III secretion system substrate exporter ISU55_02210 IPR006307 Type III exporter system, secretion apparatus protein BsaZ ISU55_02215 IPR007272 Sulphur transport domain ISU55_02220 IPR036868 TusA-like domain superfamily ISU55_02220 IPR001455 TusA-like domain ISU55_02225 IPR005119 LysR, substrate-binding ISU55_02225 IPR036390 Winged helix DNA-binding domain superfamily ISU55_02225 IPR000847 Transcription regulator HTH, LysR ISU55_02225 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_02230 IPR018227 Amino acid/polyamine transporter 2 ISU55_02235 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_02235 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ISU55_02235 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_02235 IPR006233 Cystathionine beta-lyase, bacterial ISU55_02235 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_02240 IPR003593 AAA+ ATPase domain ISU55_02240 IPR003439 ABC transporter-like ISU55_02240 IPR015863 ABC transporter, hemin import, HmuV ISU55_02240 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02240 IPR017871 ABC transporter, conserved site ISU55_02245 IPR037294 ABC transporter, BtuC-like ISU55_02245 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_02250 IPR002491 ABC transporter periplasmic binding domain ISU55_02255 IPR007845 Haemin-degrading HemS/ChuX domain ISU55_02260 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_02260 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_02260 IPR039426 Vitamin B12 transporter BtuB-like ISU55_02260 IPR010916 TonB box, conserved site ISU55_02260 IPR012910 TonB-dependent receptor, plug domain ISU55_02260 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_02260 IPR011276 TonB-dependent haem/haemoglobin receptor ISU55_02260 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor ISU55_02270 IPR016040 NAD(P)-binding domain ISU55_02270 IPR036291 NAD(P)-binding domain superfamily ISU55_02275 IPR010413 Intracellular heme transport protein HutX-like ISU55_02280 IPR026332 Anaerobilin synthase HutW ISU55_02280 IPR034505 Anaerobic coproporphyrinogen-III oxidase ISU55_02280 IPR007197 Radical SAM ISU55_02280 IPR006638 Elp3/MiaB/NifB ISU55_02280 IPR023404 Radical SAM, alpha/beta horseshoe ISU55_02290 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW ISU55_02300 IPR011215 Phosphoribosyl transferase ISU55_02300 IPR028157 PELOTA RNA-binding domain ISU55_02320 IPR003325 TerD domain ISU55_02325 IPR003325 TerD domain ISU55_02325 IPR017115 Tellurite resistance, TerA ISU55_02330 IPR029024 TerB-like ISU55_02330 IPR007791 Co-chaperone DjlA, N-terminal ISU55_02335 IPR022369 Integral membrane protein TerC, riboswitch-linked ISU55_02335 IPR005496 Integral membrane protein TerC ISU55_02340 IPR003325 TerD domain ISU55_02345 IPR003325 TerD domain ISU55_02355 IPR037224 PapC, N-terminal domain superfamily ISU55_02355 IPR025885 PapC, N-terminal domain ISU55_02355 IPR025949 PapC-like, C-terminal domain ISU55_02355 IPR042186 Outer membrane usher protein FimD, plug domain ISU55_02355 IPR000015 Outer membrane usher protein ISU55_02360 IPR013783 Immunoglobulin-like fold ISU55_02360 IPR008962 PapD-like superfamily ISU55_02360 IPR016147 Pili assembly chaperone, N-terminal ISU55_02360 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_02375 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_02375 IPR012951 Berberine/berberine-like ISU55_02375 IPR006094 FAD linked oxidase, N-terminal ISU55_02375 IPR016166 FAD-binding domain, PCMH-type ISU55_02375 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_02385 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ISU55_02385 IPR007440 Chorismate--pyruvate lyase ISU55_02390 IPR000537 UbiA prenyltransferase family ISU55_02390 IPR039653 Prenyltransferase ISU55_02390 IPR030470 UbiA prenyltransferase conserved site ISU55_02390 IPR006370 4-hydroxybenzoate polyprenyltransferase-like ISU55_02395 IPR002123 Phospholipid/glycerol acyltransferase ISU55_02395 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB ISU55_02395 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase ISU55_02395 IPR041728 GPAT/DHAPAT, acyltransferase domain ISU55_02400 IPR000829 DAGK family ISU55_02400 IPR036945 Diacylglycerol kinase (DAGK) superfamily ISU55_02400 IPR033718 Diacylglycerol kinase, prokaryotic ISU55_02405 IPR036286 LexA/Signal peptidase-like superfamily ISU55_02405 IPR006199 LexA repressor, DNA-binding domain ISU55_02405 IPR036390 Winged helix DNA-binding domain superfamily ISU55_02405 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_02405 IPR006200 Transcription regulator LexA ISU55_02405 IPR039418 LexA-like ISU55_02405 IPR006197 Peptidase S24, LexA-like ISU55_02405 IPR015927 Peptidase S24/S26A/S26B/S26C ISU55_02410 IPR036390 Winged helix DNA-binding domain superfamily ISU55_02410 IPR002481 Ferric-uptake regulator ISU55_02410 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_02415 IPR001269 tRNA-dihydrouridine synthase ISU55_02415 IPR018517 tRNA-dihydrouridine synthase, conserved site ISU55_02415 IPR013785 Aldolase-type TIM barrel ISU55_02415 IPR004653 tRNA-dihydrouridine(20/20a) synthase ISU55_02415 IPR035587 DUS-like, FMN-binding domain ISU55_02420 IPR014318 Phage shock protein, PspG ISU55_02425 IPR036291 NAD(P)-binding domain superfamily ISU55_02425 IPR013154 Alcohol dehydrogenase, N-terminal ISU55_02425 IPR013149 Alcohol dehydrogenase, C-terminal ISU55_02425 IPR020843 Polyketide synthase, enoylreductase domain ISU55_02425 IPR011032 GroES-like superfamily ISU55_02425 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site ISU55_02430 IPR007694 DNA helicase, DnaB-like, C-terminal ISU55_02430 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02430 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ISU55_02430 IPR007693 DNA helicase, DnaB-like, N-terminal ISU55_02430 IPR007692 DNA helicase, DnaB type ISU55_02430 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily ISU55_02430 IPR003593 AAA+ ATPase domain ISU55_02435 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site ISU55_02435 IPR001608 Alanine racemase, N-terminal ISU55_02435 IPR011079 Alanine racemase, C-terminal ISU55_02435 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ISU55_02435 IPR000821 Alanine racemase ISU55_02435 IPR029066 PLP-binding barrel ISU55_02440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_02440 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_02440 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ISU55_02440 IPR000796 Aspartate/other aminotransferase ISU55_02440 IPR004839 Aminotransferase, class I/classII ISU55_02440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_02445 IPR038056 YjbR-like superfamily ISU55_02445 IPR007351 Uncharacterised protein YjbR ISU55_02450 IPR041552 UvrA DNA-binding domain ISU55_02450 IPR041102 UvrA, interaction domain ISU55_02450 IPR004602 UvrABC system subunit A ISU55_02450 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02450 IPR017871 ABC transporter, conserved site ISU55_02450 IPR003439 ABC transporter-like ISU55_02455 IPR011344 Single-stranded DNA-binding protein ISU55_02455 IPR000424 Primosome PriB/single-strand DNA-binding ISU55_02455 IPR012340 Nucleic acid-binding, OB-fold ISU55_02460 IPR008000 Rhamnose/fucose mutarotase ISU55_02460 IPR011008 Dimeric alpha-beta barrel ISU55_02460 IPR013448 L-rhamnose mutarotase ISU55_02465 IPR039697 Iron-type alcohol dehydrogenase-like ISU55_02465 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ISU55_02465 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ISU55_02470 IPR013447 Rhamnulose-1-phosphate aldolase ISU55_02470 IPR001303 Class II aldolase/adducin N-terminal ISU55_02470 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ISU55_02475 IPR009308 Rhamnose isomerase ISU55_02475 IPR036237 Xylose isomerase-like superfamily ISU55_02480 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_02480 IPR000577 Carbohydrate kinase, FGGY ISU55_02480 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_02480 IPR013449 Rhamnulokinase ISU55_02490 IPR014710 RmlC-like jelly roll fold ISU55_02490 IPR018060 DNA binding HTH domain, AraC-type ISU55_02490 IPR020449 Transcription regulator HTH, AraC- type ISU55_02490 IPR023609 Transcription regulator HTH, RhaS ISU55_02490 IPR037923 Transcription regulator HTH-like ISU55_02490 IPR003313 AraC-type arabinose-binding/dimerisation domain ISU55_02490 IPR009057 Homeobox-like domain superfamily ISU55_02495 IPR018060 DNA binding HTH domain, AraC-type ISU55_02495 IPR023699 Transcription activator HTH, RhaR ISU55_02495 IPR020449 Transcription regulator HTH, AraC- type ISU55_02495 IPR014710 RmlC-like jelly roll fold ISU55_02495 IPR018062 HTH domain AraC-type, conserved site ISU55_02495 IPR011051 RmlC-like cupin domain superfamily ISU55_02495 IPR009057 Homeobox-like domain superfamily ISU55_02495 IPR003313 AraC-type arabinose-binding/dimerisation domain ISU55_02500 IPR004673 L-rhamnose-proton symport, RhaT ISU55_02510 IPR008992 Enterotoxin ISU55_02525 IPR001647 DNA-binding HTH domain, TetR-type ISU55_02525 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ISU55_02525 IPR009057 Homeobox-like domain superfamily ISU55_02530 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_02530 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_02530 IPR028261 Dihydroprymidine dehydrogenase domain II ISU55_02530 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_02530 IPR009051 Alpha-helical ferredoxin ISU55_02530 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 ISU55_02530 IPR023753 FAD/NAD(P)-binding domain ISU55_02535 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_02535 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_02540 IPR009010 Aspartate decarboxylase-like domain superfamily ISU55_02540 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ISU55_02540 IPR006656 Molybdopterin oxidoreductase ISU55_02540 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site ISU55_02540 IPR006657 Molybdopterin dinucleotide-binding domain ISU55_02540 IPR006478 Formate dehydrogenase, alpha subunit ISU55_02540 IPR041924 Formate dehydrogenase H, N-terminal ISU55_02540 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain ISU55_02540 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site ISU55_02545 IPR017937 Thioredoxin, conserved site ISU55_02545 IPR036249 Thioredoxin-like superfamily ISU55_02545 IPR013766 Thioredoxin domain ISU55_02545 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ISU55_02545 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ISU55_02545 IPR035671 DsbD gamma ISU55_02545 IPR003834 Cytochrome C biogenesis protein, transmembrane domain ISU55_02545 IPR022910 Thiol:disulphide interchange protein DsbD ISU55_02550 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ISU55_02550 IPR011322 Nitrogen regulatory PII-like, alpha/beta ISU55_02550 IPR004323 Divalent ion tolerance protein, CutA ISU55_02550 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria ISU55_02555 IPR004668 Anaerobic c4-dicarboxylate membrane transporter ISU55_02560 IPR018951 Fumarase C, C-terminal ISU55_02560 IPR004708 Aspartate ammonia-lyase ISU55_02560 IPR020557 Fumarate lyase, conserved site ISU55_02560 IPR000362 Fumarate lyase family ISU55_02560 IPR022761 Fumarate lyase, N-terminal ISU55_02560 IPR008948 L-Aspartase-like ISU55_02560 IPR024083 Fumarase/histidase, N-terminal ISU55_02565 IPR007313 FxsA cytoplasmic membrane protein ISU55_02570 IPR011032 GroES-like superfamily ISU55_02570 IPR037124 GroES chaperonin superfamily ISU55_02570 IPR018369 Chaperonin GroES, conserved site ISU55_02570 IPR020818 GroES chaperonin family ISU55_02575 IPR027413 GroEL-like equatorial domain superfamily ISU55_02575 IPR027409 GroEL-like apical domain superfamily ISU55_02575 IPR018370 Chaperonin Cpn60, conserved site ISU55_02575 IPR002423 Chaperonin Cpn60/TCP-1 family ISU55_02575 IPR001844 Chaperonin Cpn60 ISU55_02575 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ISU55_02580 IPR025294 Protein of unknown function DUF4156 ISU55_02585 IPR007197 Radical SAM ISU55_02585 IPR013785 Aldolase-type TIM barrel ISU55_02585 IPR022462 Lysine-2,3-aminomutase-like ISU55_02585 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ISU55_02590 IPR011768 Translation elongation factor P ISU55_02590 IPR013852 Translation elongation factor P/YeiP, conserved site ISU55_02590 IPR020599 Translation elongation factor P/YeiP ISU55_02590 IPR001059 Translation elongation factor P/YeiP, central ISU55_02590 IPR015365 Elongation factor P, C-terminal ISU55_02590 IPR012340 Nucleic acid-binding, OB-fold ISU55_02590 IPR014722 Ribosomal protein L2, domain 2 ISU55_02590 IPR008991 Translation protein SH3-like domain superfamily ISU55_02590 IPR013185 Translation elongation factor, KOW-like ISU55_02595 IPR000390 Small multidrug resistance protein family ISU55_02600 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit ISU55_02600 IPR003418 Fumarate reductase, subunit D ISU55_02605 IPR003510 Fumarate reductase, subunit C ISU55_02605 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit ISU55_02610 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_02610 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein ISU55_02610 IPR009051 Alpha-helical ferredoxin ISU55_02610 IPR012675 Beta-grasp domain superfamily ISU55_02610 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_02610 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_02610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site ISU55_02610 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_02610 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal ISU55_02615 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily ISU55_02615 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ISU55_02615 IPR005884 Fumarate reductase, flavoprotein subunit ISU55_02615 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal ISU55_02615 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_02615 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site ISU55_02615 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit ISU55_02615 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ISU55_02625 IPR004525 Elongation factor P--(R)-beta-lysine ligase ISU55_02625 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal ISU55_02625 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ISU55_02625 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_02630 IPR024393 Mechanosensitive ion channel MscS, porin domain ISU55_02630 IPR025692 Mechanosensitive ion channel inner membrane domain 1 ISU55_02630 IPR023408 Mechanosensitive ion channel MscS domain superfamily ISU55_02630 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ISU55_02630 IPR010920 LSM domain superfamily ISU55_02630 IPR011066 Mechanosensitive ion channel MscS, C-terminal ISU55_02630 IPR006686 Mechanosensitive ion channel MscS, conserved site ISU55_02630 IPR006685 Mechanosensitive ion channel MscS ISU55_02635 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 ISU55_02635 IPR033177 Phosphatidylserine decarboxylase ISU55_02635 IPR003817 Phosphatidylserine decarboxylase-related ISU55_02640 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain ISU55_02640 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02640 IPR004881 Ribosome biogenesis GTPase RsgA ISU55_02640 IPR010914 RsgA GTPase domain ISU55_02645 IPR036397 Ribonuclease H superfamily ISU55_02645 IPR022894 Oligoribonuclease ISU55_02645 IPR012337 Ribonuclease H-like superfamily ISU55_02645 IPR013520 Exonuclease, RNase T/DNA polymerase III ISU55_02660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_02660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_02660 IPR013542 Domain of unknown function DUF1730 ISU55_02660 IPR004453 Epoxyqueuosine reductase QueG ISU55_02660 IPR009051 Alpha-helical ferredoxin ISU55_02665 IPR029056 Ribokinase-like ISU55_02665 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr ISU55_02665 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase ISU55_02665 IPR004443 YjeF N-terminal domain ISU55_02665 IPR036652 YjeF N-terminal domain superfamily ISU55_02665 IPR017953 Carbohydrate kinase, predicted, conserved site ISU55_02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02670 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE ISU55_02675 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain ISU55_02680 IPR014790 MutL, C-terminal, dimerisation ISU55_02680 IPR020667 DNA mismatch repair protein, MutL ISU55_02680 IPR037198 MutL, C-terminal domain superfamily ISU55_02680 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms ISU55_02680 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_02680 IPR002099 DNA mismatch repair protein family, N-terminal ISU55_02680 IPR013507 DNA mismatch repair protein, S5 domain 2-like ISU55_02680 IPR014762 DNA mismatch repair, conserved site ISU55_02680 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_02680 IPR042121 MutL, C-terminal domain, regulatory subdomain ISU55_02680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_02680 IPR042120 MutL, C-terminal domain, dimerisation subdomain ISU55_02685 IPR039657 Dimethylallyltransferase ISU55_02685 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02685 IPR018022 IPP transferase ISU55_02690 IPR005001 RNA-binding protein Hfq ISU55_02690 IPR010920 LSM domain superfamily ISU55_02695 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02695 IPR025121 GTPase HflX, N-terminal ISU55_02695 IPR035647 EF-G domain III/V-like ISU55_02695 IPR016496 GTPase HflX ISU55_02695 IPR006073 GTP binding domain ISU55_02695 IPR042108 GTPase HflX, N-terminal domain superfamily ISU55_02695 IPR030394 HflX-type guanine nucleotide-binding (G) domain ISU55_02695 IPR032305 GTP-binding protein, middle domain ISU55_02700 IPR020980 Menbrane protein HflK, N-terminal ISU55_02700 IPR010201 HflK ISU55_02700 IPR036013 Band 7/SPFH domain superfamily ISU55_02700 IPR001972 Stomatin family ISU55_02700 IPR001107 Band 7 domain ISU55_02705 IPR001107 Band 7 domain ISU55_02705 IPR036013 Band 7/SPFH domain superfamily ISU55_02705 IPR010200 HflC ISU55_02710 IPR019201 Protein of unknown function DUF2065 ISU55_02715 IPR001114 Adenylosuccinate synthetase ISU55_02715 IPR042109 Adenylosuccinate synthetase, domain 1 ISU55_02715 IPR018220 Adenylosuccinate synthase, GTP-binding site ISU55_02715 IPR042111 Adenylosuccinate synthetase, domain 3 ISU55_02715 IPR042110 Adenylosuccinate synthetase, domain 2 ISU55_02715 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02715 IPR033128 Adenylosuccinate synthase, active site ISU55_02720 IPR023761 Transcriptional repressor HTH, NsrR ISU55_02720 IPR030489 Transcription regulator Rrf2-type, conserved site ISU55_02720 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_02720 IPR036390 Winged helix DNA-binding domain superfamily ISU55_02720 IPR000944 Transcription regulator Rrf2-type ISU55_02725 IPR013668 Ribonuclease R winged-helix domain ISU55_02725 IPR022966 Ribonuclease II/R, conserved site ISU55_02725 IPR011129 Cold shock domain ISU55_02725 IPR011805 Ribonuclease R ISU55_02725 IPR001900 Ribonuclease II/R ISU55_02725 IPR012340 Nucleic acid-binding, OB-fold ISU55_02725 IPR013223 Ribonuclease B, N-terminal OB domain ISU55_02725 IPR003029 S1 domain ISU55_02725 IPR022967 RNA-binding domain, S1 ISU55_02725 IPR040476 RNase II/RNase R, cold shock domain ISU55_02725 IPR004476 Ribonuclease II/ribonuclease R ISU55_02730 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_02730 IPR004441 RNA methyltransferase TrmH family ISU55_02730 IPR029064 50S ribosomal protein L30e-like ISU55_02730 IPR001537 tRNA/rRNA methyltransferase, SpoU type ISU55_02730 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ISU55_02730 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB ISU55_02730 IPR029028 Alpha/beta knot methyltransferases ISU55_02735 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ISU55_02735 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ISU55_02735 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ISU55_02735 IPR006089 Acyl-CoA dehydrogenase, conserved site ISU55_02735 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ISU55_02735 IPR034184 Putative acyl-CoA dehydrogenase AidB ISU55_02735 IPR041504 Adaptive response protein AidB, N-terminal ISU55_02740 IPR036275 YdgH-like superfamily ISU55_02740 IPR010854 Domain of unknown function DUF1471 ISU55_02740 IPR025543 Dodecin-like ISU55_02750 IPR001270 ClpA/B family ISU55_02750 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_02750 IPR002611 IstB-like ATP-binding protein ISU55_02750 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02750 IPR003593 AAA+ ATPase domain ISU55_02755 IPR036397 Ribonuclease H superfamily ISU55_02755 IPR012337 Ribonuclease H-like superfamily ISU55_02755 IPR017894 HTH domain, IS21 transposase-type ISU55_02755 IPR001584 Integrase, catalytic core ISU55_02755 IPR006120 Resolvase, HTH domain ISU55_02760 IPR029058 Alpha/Beta hydrolase fold ISU55_02760 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ISU55_02765 IPR035980 Ribosomal protein S6 superfamily ISU55_02765 IPR000529 Ribosomal protein S6 ISU55_02765 IPR020815 Ribosomal protein S6, conserved site ISU55_02765 IPR020814 Ribosomal protein S6, plastid/chloroplast ISU55_02765 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ISU55_02770 IPR000424 Primosome PriB/single-strand DNA-binding ISU55_02770 IPR012340 Nucleic acid-binding, OB-fold ISU55_02770 IPR023646 Primosomal replication protein PriB ISU55_02775 IPR001648 Ribosomal protein S18 ISU55_02775 IPR018275 Ribosomal protein S18, conserved site ISU55_02775 IPR036870 Ribosomal protein S18 superfamily ISU55_02780 IPR036935 Ribosomal protein L9, N-terminal domain superfamily ISU55_02780 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ISU55_02780 IPR000244 Ribosomal protein L9 ISU55_02780 IPR020069 Ribosomal protein L9, C-terminal ISU55_02780 IPR020594 Ribosomal protein L9, bacteria/chloroplast ISU55_02780 IPR020070 Ribosomal protein L9, N-terminal ISU55_02780 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ISU55_02785 IPR036515 Transposase IS200-like superfamily ISU55_02785 IPR002686 Transposase IS200-like ISU55_02795 IPR007340 Opacity-associated protein A ISU55_02795 IPR013731 Opacity-associated protein A, N-terminal ISU55_02800 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal ISU55_02800 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ISU55_02800 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily ISU55_02805 IPR019903 Repair of iron centres family ISU55_02805 IPR023742 Iron-sulfur cluster repair protein YftE ISU55_02805 IPR012312 Haemerythrin-like ISU55_02810 IPR029052 Metallo-dependent phosphatase-like ISU55_02810 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase ISU55_02810 IPR036907 5'-Nucleotidase, C-terminal domain superfamily ISU55_02810 IPR041827 CpdB, N-terminal metallophosphatase domain ISU55_02810 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ISU55_02810 IPR006146 5'-Nucleotidase, conserved site ISU55_02810 IPR006179 5'-Nucleotidase/apyrase ISU55_02810 IPR008334 5'-Nucleotidase, C-terminal ISU55_02815 IPR020550 Inositol monophosphatase, conserved site ISU55_02815 IPR000760 Inositol monophosphatase-like ISU55_02815 IPR020583 Inositol monophosphatase, metal-binding site ISU55_02815 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ ISU55_02820 IPR006513 Conserved hypothetical protein CHP01626, YtfJ ISU55_02825 IPR009491 Protein of unknown function DUF1107 ISU55_02830 IPR005170 Transporter-associated domain ISU55_02830 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_02830 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_02830 IPR002550 CNNM, transmembrane domain ISU55_02830 IPR000644 CBS domain ISU55_02835 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily ISU55_02835 IPR002569 Peptide methionine sulphoxide reductase MsrA ISU55_02840 IPR035243 TamA, POTRA domain 1 ISU55_02840 IPR034746 POTRA domain ISU55_02840 IPR010827 POTRA domain, BamA/TamA-like ISU55_02840 IPR039910 Surface antigen D15-like ISU55_02840 IPR000184 Bacterial surface antigen (D15) ISU55_02845 IPR007452 Translocation and assembly module TamB ISU55_02850 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like ISU55_02850 IPR039126 Gamma-glutamylaminecyclotransferase ISU55_02850 IPR013024 Gamma-glutamyl cyclotransferase-like ISU55_02850 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily ISU55_02855 IPR036649 Inorganic pyrophosphatase superfamily ISU55_02855 IPR008162 Inorganic pyrophosphatase ISU55_02860 IPR000146 Fructose-1,6-bisphosphatase class 1 ISU55_02860 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal ISU55_02860 IPR028343 Fructose-1,6-bisphosphatase ISU55_02860 IPR020548 Fructose-1,6-bisphosphatase, active site ISU55_02865 IPR013221 Mur ligase, central ISU55_02865 IPR000713 Mur ligase, N-terminal catalytic domain ISU55_02865 IPR036615 Mur ligase, C-terminal domain superfamily ISU55_02865 IPR036565 Mur-like, catalytic domain superfamily ISU55_02865 IPR004101 Mur ligase, C-terminal ISU55_02865 IPR005757 Murein peptide ligase ISU55_02875 IPR036390 Winged helix DNA-binding domain superfamily ISU55_02875 IPR001669 Arginine repressor ISU55_02875 IPR020899 Arginine repressor, C-terminal ISU55_02875 IPR036251 Arginine repressor, C-terminal domain superfamily ISU55_02875 IPR020900 Arginine repressor, DNA-binding domain ISU55_02875 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_02880 IPR001557 L-lactate/malate dehydrogenase ISU55_02880 IPR022383 Lactate/malate dehydrogenase, C-terminal ISU55_02880 IPR001236 Lactate/malate dehydrogenase, N-terminal ISU55_02880 IPR001252 Malate dehydrogenase, active site ISU55_02880 IPR010097 Malate dehydrogenase, type 1 ISU55_02880 IPR023958 Malate dehydrogenase, type 1, bacterial ISU55_02880 IPR036291 NAD(P)-binding domain superfamily ISU55_02880 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal ISU55_02885 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_02885 IPR038722 Ner, winged helix-turn-helix DNA-binding domain ISU55_02895 IPR000092 Polyprenyl synthetase ISU55_02895 IPR033749 Polyprenyl synthetase, conserved site ISU55_02895 IPR008949 Isoprenoid synthase domain superfamily ISU55_02900 IPR001787 Ribosomal protein L21 ISU55_02900 IPR018258 Ribosomal protein L21, conserved site ISU55_02900 IPR036164 L21-like superfamily ISU55_02900 IPR028909 Ribosomal protein L21-like ISU55_02905 IPR018261 Ribosomal protein L27, conserved site ISU55_02905 IPR001684 Ribosomal protein L27 ISU55_02910 IPR000620 EamA domain ISU55_02915 IPR014100 GTP-binding protein Obg/CgtA ISU55_02915 IPR006169 GTP1/OBG domain ISU55_02915 IPR036726 GTP1/OBG domain superfamily ISU55_02915 IPR006073 GTP binding domain ISU55_02915 IPR031167 OBG-type guanine nucleotide-binding (G) domain ISU55_02915 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02915 IPR035101 GTP-binding protein, Obg-type ISU55_02915 IPR006074 GTP1/OBG, conserved site ISU55_02920 IPR003660 HAMP domain ISU55_02920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_02920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_02920 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_02920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_02920 IPR005467 Histidine kinase domain ISU55_02920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_02925 IPR011006 CheY-like superfamily ISU55_02925 IPR001789 Signal transduction response regulator, receiver domain ISU55_02925 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_02925 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_02925 IPR039420 Transcriptional regulatory protein WalR-like ISU55_02930 IPR012338 Beta-lactamase/transpeptidase-like ISU55_02930 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C ISU55_02935 IPR006359 Transcription elongation factor GreA ISU55_02935 IPR018151 Transcription elongation factor, GreA/GreB, conserved site ISU55_02935 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily ISU55_02935 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily ISU55_02935 IPR028624 Transcription elongation factor GreA/GreB ISU55_02935 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal ISU55_02935 IPR023459 Transcription elongation factor GreA/GreB family ISU55_02935 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal ISU55_02940 IPR001890 RNA-binding, CRM domain ISU55_02940 IPR017924 RNA-binding protein YhbY ISU55_02940 IPR035920 YhbY-like superfamily ISU55_02945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_02945 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria ISU55_02945 IPR002877 Ribosomal RNA methyltransferase FtsJ domain ISU55_02945 IPR015507 Ribosomal RNA large subunit methyltransferase E ISU55_02950 IPR000642 Peptidase M41 ISU55_02950 IPR037219 Peptidase M41-like ISU55_02950 IPR011546 Peptidase M41, FtsH extracellular ISU55_02950 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02950 IPR005936 Peptidase, FtsH ISU55_02950 IPR003960 ATPase, AAA-type, conserved site ISU55_02950 IPR003959 ATPase, AAA-type, core ISU55_02950 IPR041569 AAA ATPase, AAA+ lid domain ISU55_02950 IPR003593 AAA+ ATPase domain ISU55_02955 IPR006390 Dihydropteroate synthase ISU55_02955 IPR011005 Dihydropteroate synthase-like ISU55_02955 IPR000489 Pterin-binding domain ISU55_02960 IPR016066 Alpha-D-phosphohexomutase, conserved site ISU55_02960 IPR005841 Alpha-D-phosphohexomutase superfamily ISU55_02960 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ISU55_02960 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ISU55_02960 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ISU55_02960 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ISU55_02960 IPR006352 Phosphoglucosamine mutase, bacterial type ISU55_02960 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ISU55_02960 IPR005843 Alpha-D-phosphohexomutase, C-terminal ISU55_02965 IPR004692 Preprotein translocase SecG subunit ISU55_02980 IPR035956 RimP, N-terminal domain superfamily ISU55_02980 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily ISU55_02980 IPR028998 Ribosome maturation factor RimP, C-terminal ISU55_02980 IPR003728 Ribosome maturation factor RimP ISU55_02980 IPR028989 Ribosome maturation factor RimP, N-terminal ISU55_02985 IPR012340 Nucleic acid-binding, OB-fold ISU55_02985 IPR010213 Transcription termination factor NusA ISU55_02985 IPR010214 Transcription termination factor NusA, C-terminal duplication ISU55_02985 IPR013735 Transcription factor NusA, N-terminal ISU55_02985 IPR003029 S1 domain ISU55_02985 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical ISU55_02985 IPR022967 RNA-binding domain, S1 ISU55_02985 IPR036555 NusA, N-terminal domain superfamily ISU55_02985 IPR015946 K homology domain-like, alpha/beta ISU55_02985 IPR009019 K homology domain superfamily, prokaryotic type ISU55_02985 IPR025249 KH domain, NusA-like ISU55_02985 IPR030842 Transcription termination/antitermination protein NusA, bacterial ISU55_02990 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ISU55_02990 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_02990 IPR006847 Translation initiation factor IF-2, N-terminal ISU55_02990 IPR015760 Translation initiation factor IF- 2 ISU55_02990 IPR000178 Translation initiation factor aIF-2, bacterial-like ISU55_02990 IPR009061 Putative DNA-binding domain superfamily ISU55_02990 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_02990 IPR013575 Initiation factor 2 associated domain, bacterial ISU55_02990 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_02990 IPR023115 Translation initiation factor IF- 2, domain 3 ISU55_02990 IPR000795 Transcription factor, GTP-binding domain ISU55_02990 IPR005225 Small GTP-binding protein domain ISU55_02995 IPR020053 Ribosome-binding factor A, conserved site ISU55_02995 IPR023799 Ribosome-binding factor A domain superfamily ISU55_02995 IPR000238 Ribosome-binding factor A ISU55_02995 IPR015946 K homology domain-like, alpha/beta ISU55_03000 IPR032819 tRNA pseudouridylate synthase B, C-terminal ISU55_03000 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_03000 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal ISU55_03000 IPR036974 PUA domain superfamily ISU55_03000 IPR014780 tRNA pseudouridine synthase II, TruB ISU55_03000 IPR015947 PUA-like superfamily ISU55_03000 IPR002501 Pseudouridine synthase II, N-terminal ISU55_03005 IPR005290 Ribosomal protein S15, bacterial-type ISU55_03005 IPR009068 S15/NS1, RNA-binding ISU55_03005 IPR000589 Ribosomal protein S15 ISU55_03015 IPR003029 S1 domain ISU55_03015 IPR015847 Exoribonuclease, phosphorolytic domain 2 ISU55_03015 IPR022967 RNA-binding domain, S1 ISU55_03015 IPR001247 Exoribonuclease, phosphorolytic domain 1 ISU55_03015 IPR036345 Exoribonuclease, PH domain 2 superfamily ISU55_03015 IPR012162 Polyribonucleotide nucleotidyltransferase ISU55_03015 IPR012340 Nucleic acid-binding, OB-fold ISU55_03015 IPR027408 PNPase/RNase PH domain superfamily ISU55_03015 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_03015 IPR036612 K Homology domain, type 1 superfamily ISU55_03015 IPR004088 K Homology domain, type 1 ISU55_03015 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily ISU55_03015 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain ISU55_03015 IPR004087 K Homology domain ISU55_03020 IPR013105 Tetratricopeptide repeat 2 ISU55_03020 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_03020 IPR019734 Tetratricopeptide repeat ISU55_03020 IPR013026 Tetratricopeptide repeat-containing domain ISU55_03020 IPR023605 Lipoprotein NlpI ISU55_03030 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ISU55_03030 IPR021046 Cold-shock protein, DEAD box A, C-terminal ISU55_03030 IPR001650 Helicase, C-terminal ISU55_03030 IPR034415 CsdA, RNA recognition motif ISU55_03030 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_03030 IPR028618 ATP-dependent RNA helicase DeaD ISU55_03030 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ISU55_03030 IPR011545 DEAD/DEAH box helicase domain ISU55_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03030 IPR014014 RNA helicase, DEAD-box type, Q motif ISU55_03030 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ISU55_03040 IPR001387 Cro/C1-type helix-turn-helix domain ISU55_03040 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_03050 IPR019949 Luciferase family oxidoreductase, group 1 ISU55_03050 IPR036661 Luciferase-like domain superfamily ISU55_03050 IPR011251 Luciferase-like domain ISU55_03055 IPR006143 RND efflux pump, membrane fusion protein ISU55_03055 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_03060 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ISU55_03060 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 ISU55_03060 IPR001036 Acriflavin resistance protein ISU55_03065 IPR003423 Outer membrane efflux protein ISU55_03065 IPR010131 RND efflux system, outer membrane lipoprotein, NodT ISU55_03065 IPR012640 Membrane lipoprotein, lipid attachment site ISU55_03070 IPR001539 Peptidase U32 ISU55_03075 IPR036206 Thiamin phosphate synthase superfamily ISU55_03075 IPR001539 Peptidase U32 ISU55_03080 IPR036527 SCP2 sterol-binding domain superfamily ISU55_03080 IPR003033 SCP2 sterol-binding domain ISU55_03080 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT ISU55_03080 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 ISU55_03085 IPR016181 Acyl-CoA N-acyltransferase ISU55_03085 IPR000182 GNAT domain ISU55_03090 IPR000305 GIY-YIG endonuclease ISU55_03090 IPR035901 GIY-YIG endonuclease superfamily ISU55_03090 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease ISU55_03105 IPR006059 Bacterial extracellular solute-binding protein ISU55_03110 IPR035906 MetI-like superfamily ISU55_03110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_03115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_03115 IPR035906 MetI-like superfamily ISU55_03120 IPR003439 ABC transporter-like ISU55_03120 IPR003593 AAA+ ATPase domain ISU55_03120 IPR005116 Transport-associated OB, type 1 ISU55_03120 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03120 IPR040582 MalK, OB fold domain ISU55_03120 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_03120 IPR017871 ABC transporter, conserved site ISU55_03130 IPR012349 FMN-binding split barrel ISU55_03130 IPR011194 Uncharacterised protein family UPF0306 ISU55_03135 IPR000534 Semialdehyde dehydrogenase, NAD-binding ISU55_03135 IPR016040 NAD(P)-binding domain ISU55_03135 IPR036291 NAD(P)-binding domain superfamily ISU55_03140 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ISU55_03140 IPR017693 Phosphonate metabolism protein PhnP ISU55_03140 IPR035682 Phosphonate metabolism protein, MBL domain ISU55_03140 IPR001279 Metallo-beta-lactamase ISU55_03145 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN ISU55_03145 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03145 IPR008144 Guanylate kinase-like domain ISU55_03145 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ISU55_03150 IPR013108 Amidohydrolase 3 ISU55_03150 IPR012696 Phosphonate metabolism PhnM ISU55_03150 IPR032466 Metal-dependent hydrolase ISU55_03150 IPR011059 Metal-dependent hydrolase, composite domain superfamily ISU55_03155 IPR003439 ABC transporter-like ISU55_03155 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03155 IPR012701 Phosphonate C-P lyase system, PhnL ISU55_03155 IPR003593 AAA+ ATPase domain ISU55_03155 IPR017871 ABC transporter, conserved site ISU55_03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03160 IPR012700 Phosphonate C-P lyase system, PhnK ISU55_03160 IPR017871 ABC transporter, conserved site ISU55_03160 IPR003439 ABC transporter-like ISU55_03160 IPR003593 AAA+ ATPase domain ISU55_03165 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase ISU55_03170 IPR008773 Phosphonate metabolism protein PhnI ISU55_03175 IPR038058 PhnH-like superfamily ISU55_03175 IPR008772 Bacterial phosphonate metabolism, PhnH ISU55_03180 IPR009609 Phosphonate metabolism PhnG ISU55_03185 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF ISU55_03185 IPR000524 Transcription regulator HTH, GntR ISU55_03185 IPR011663 UbiC transcription regulator-associated ISU55_03185 IPR036390 Winged helix DNA-binding domain superfamily ISU55_03185 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_03185 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ISU55_03190 IPR034457 Organic radical-activating enzymes ISU55_03190 IPR001989 Radical-activating enzyme, conserved site ISU55_03190 IPR013785 Aldolase-type TIM barrel ISU55_03190 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic ISU55_03195 IPR005144 ATP-cone domain ISU55_03195 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic ISU55_03195 IPR001150 Glycine radical domain ISU55_03195 IPR019777 Formate C-acetyltransferase glycine radical, conserved site ISU55_03200 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03200 IPR003593 AAA+ ATPase domain ISU55_03200 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_03200 IPR003439 ABC transporter-like ISU55_03200 IPR017871 ABC transporter, conserved site ISU55_03205 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_03205 IPR017871 ABC transporter, conserved site ISU55_03205 IPR003439 ABC transporter-like ISU55_03205 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03205 IPR003593 AAA+ ATPase domain ISU55_03210 IPR035906 MetI-like superfamily ISU55_03210 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ISU55_03210 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_03215 IPR035906 MetI-like superfamily ISU55_03215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_03225 IPR037012 YhcH/YjgK/YiaL superfamily ISU55_03225 IPR004375 YhcH/YjgK/YiaL family ISU55_03230 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain ISU55_03230 IPR002292 Ornithine/putrescine carbamoyltransferase ISU55_03230 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding ISU55_03230 IPR006130 Aspartate/ornithine carbamoyltransferase ISU55_03230 IPR024904 Ornithine carbamoyltransferase ISU55_03230 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily ISU55_03235 IPR036701 RraB-like superfamily ISU55_03235 IPR016716 Regulator of ribonuclease activity B ISU55_03235 IPR009671 Regulator of ribonuclease activity B domain ISU55_03240 IPR000182 GNAT domain ISU55_03240 IPR016181 Acyl-CoA N-acyltransferase ISU55_03245 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ISU55_03245 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm ISU55_03245 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_03245 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ISU55_03245 IPR002300 Aminoacyl-tRNA synthetase, class Ia ISU55_03245 IPR033705 Valyl tRNA synthetase, anticodon-binding domain ISU55_03245 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ISU55_03245 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ISU55_03245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_03245 IPR002303 Valine-tRNA ligase ISU55_03245 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ISU55_03250 IPR007459 DNA polymerase III chi subunit, HolC ISU55_03250 IPR036768 DNA polymerase III subunit chi superfamily ISU55_03255 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B ISU55_03255 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal ISU55_03255 IPR023042 Peptidase M17, leucine aminopeptidase ISU55_03255 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal ISU55_03260 IPR005495 Permease LptG/LptF-related ISU55_03260 IPR030922 LPS export ABC transporter permease LptF ISU55_03265 IPR005495 Permease LptG/LptF-related ISU55_03265 IPR030923 LPS export ABC transporter permease LptG ISU55_03275 IPR010998 Integrase/recombinase, N-terminal ISU55_03275 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_03275 IPR013762 Integrase-like, catalytic domain superfamily ISU55_03275 IPR002104 Integrase, catalytic domain ISU55_03275 IPR038488 Integrase, DNA-binding domain superfamily ISU55_03275 IPR025166 Integrase, DNA-binding domain ISU55_03285 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms ISU55_03285 IPR042121 MutL, C-terminal domain, regulatory subdomain ISU55_03285 IPR014762 DNA mismatch repair, conserved site ISU55_03285 IPR013507 DNA mismatch repair protein, S5 domain 2-like ISU55_03285 IPR020667 DNA mismatch repair protein, MutL ISU55_03285 IPR002099 DNA mismatch repair protein family, N-terminal ISU55_03285 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_03285 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_03285 IPR037198 MutL, C-terminal domain superfamily ISU55_03285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_03285 IPR014790 MutL, C-terminal, dimerisation ISU55_03285 IPR042120 MutL, C-terminal domain, dimerisation subdomain ISU55_03290 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_03290 IPR002611 IstB-like ATP-binding protein ISU55_03290 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03290 IPR003593 AAA+ ATPase domain ISU55_03290 IPR001270 ClpA/B family ISU55_03295 IPR006120 Resolvase, HTH domain ISU55_03295 IPR017894 HTH domain, IS21 transposase-type ISU55_03295 IPR012337 Ribonuclease H-like superfamily ISU55_03295 IPR036397 Ribonuclease H superfamily ISU55_03295 IPR001584 Integrase, catalytic core ISU55_03300 IPR036515 Transposase IS200-like superfamily ISU55_03300 IPR002686 Transposase IS200-like ISU55_03305 IPR013088 Zinc finger, NHR/GATA-type ISU55_03305 IPR005584 DNA gyrase inhibitor YacG ISU55_03310 IPR027462 Z ring-associated protein D, C-terminal ISU55_03310 IPR009777 Cell division protein ZapD ISU55_03310 IPR036268 ZapD domain superfamily ISU55_03315 IPR001977 Dephospho-CoA kinase ISU55_03315 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03320 IPR015875 IMP dehydrogenase / GMP reductase, conserved site ISU55_03320 IPR001093 IMP dehydrogenase/GMP reductase ISU55_03320 IPR005993 GMP reductase ISU55_03320 IPR013785 Aldolase-type TIM barrel ISU55_03325 IPR042094 Type II secretion system F domain superfamily ISU55_03325 IPR018076 Type II secretion system F domain ISU55_03325 IPR001992 Type II secretion system conserved site ISU55_03325 IPR003004 GspF/PilC family ISU55_03330 IPR001482 Type II/IV secretion system protein ISU55_03330 IPR007831 General secretory system II, protein E, N-terminal ISU55_03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03335 IPR012902 Prokaryotic N-terminal methylation site ISU55_03340 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal ISU55_03340 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal ISU55_03340 IPR013785 Aldolase-type TIM barrel ISU55_03340 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal ISU55_03340 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD ISU55_03340 IPR004393 Nicotinate-nucleotide pyrophosphorylase ISU55_03340 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily ISU55_03345 IPR002502 N-acetylmuramoyl-L-alanine amidase domain ISU55_03345 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily ISU55_03350 IPR031347 Protein AmpE ISU55_03355 IPR004840 Amino acid permease, conserved site ISU55_03355 IPR004841 Amino acid permease/ SLC12A domain ISU55_03360 IPR000524 Transcription regulator HTH, GntR ISU55_03360 IPR008920 Transcription regulator FadR/GntR, C-terminal ISU55_03360 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_03360 IPR036390 Winged helix DNA-binding domain superfamily ISU55_03360 IPR011711 GntR, C-terminal ISU55_03365 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ISU55_03365 IPR041621 Pyruvate dehydrogenase E1 component, middle domain ISU55_03365 IPR005474 Transketolase, N-terminal ISU55_03365 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal ISU55_03365 IPR029061 Thiamin diphosphate-binding fold ISU55_03365 IPR004660 Pyruvate dehydrogenase E1 component ISU55_03370 IPR004167 Peripheral subunit-binding domain ISU55_03370 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ISU55_03370 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ISU55_03370 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ISU55_03370 IPR036625 E3-binding domain superfamily ISU55_03370 IPR011053 Single hybrid motif ISU55_03370 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex ISU55_03370 IPR000089 Biotin/lipoyl attachment ISU55_03375 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ISU55_03375 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ISU55_03375 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ISU55_03375 IPR006258 Dihydrolipoamide dehydrogenase ISU55_03375 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_03375 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU55_03375 IPR023753 FAD/NAD(P)-binding domain ISU55_03380 IPR036515 Transposase IS200-like superfamily ISU55_03380 IPR002686 Transposase IS200-like ISU55_03385 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ISU55_03385 IPR015929 Aconitase B, swivel ISU55_03385 IPR036008 Aconitase, iron-sulfur domain ISU55_03385 IPR004406 Aconitase B ISU55_03385 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain ISU55_03385 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 ISU55_03385 IPR015933 Aconitase B, HEAT-like domain ISU55_03385 IPR015932 Aconitase, domain 2 ISU55_03385 IPR018136 Aconitase family, 4Fe-4S cluster binding site ISU55_03385 IPR036288 Aconitase B, HEAT-like domain superfamily ISU55_03390 IPR008249 Uncharacterised protein family UPF0231 ISU55_03395 IPR000620 EamA domain ISU55_03400 IPR009165 S-adenosylmethionine decarboxylase, bacterial ISU55_03400 IPR016067 S-adenosylmethionine decarboxylase, core ISU55_03400 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic ISU55_03405 IPR001045 Spermidine/spermine synthases ISU55_03405 IPR035246 Spermidine synthase, tetramerisation domain ISU55_03405 IPR030374 Polyamine biosynthesis domain ISU55_03405 IPR037163 Spermidine synthase, tetramerisation domain superfamily ISU55_03405 IPR030373 Polyamine biosynthesis domain, conserved site ISU55_03405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_03410 IPR019114 Chaperone lipoprotein, PulS/OutS-like ISU55_03410 IPR038432 PulS/OutS-like superfamily ISU55_03415 IPR008972 Cupredoxin ISU55_03415 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ISU55_03415 IPR002355 Multicopper oxidase, copper-binding site ISU55_03415 IPR011707 Multicopper oxidase, type 3 ISU55_03415 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_03415 IPR011706 Multicopper oxidase, type 2 ISU55_03415 IPR001117 Multicopper oxidase, type 1 ISU55_03420 IPR029057 Phosphoribosyltransferase-like ISU55_03420 IPR000836 Phosphoribosyltransferase domain ISU55_03420 IPR005904 Hypoxanthine phosphoribosyl transferase ISU55_03425 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site ISU55_03425 IPR036874 Carbonic anhydrase superfamily ISU55_03425 IPR001765 Carbonic anhydrase ISU55_03430 IPR017871 ABC transporter, conserved site ISU55_03430 IPR003593 AAA+ ATPase domain ISU55_03430 IPR003439 ABC transporter-like ISU55_03430 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03435 IPR013525 ABC-2 type transporter ISU55_03435 IPR000412 ABC-2 transporter ISU55_03445 IPR009010 Aspartate decarboxylase-like domain superfamily ISU55_03445 IPR003190 Aspartate decarboxylase ISU55_03450 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain ISU55_03450 IPR003721 Pantoate-beta-alanine ligase ISU55_03450 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_03455 IPR040442 Pyruvate kinase-like domain superfamily ISU55_03455 IPR003700 Ketopantoate hydroxymethyltransferase ISU55_03455 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_03460 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily ISU55_03460 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK ISU55_03465 IPR002646 Poly A polymerase, head domain ISU55_03465 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain ISU55_03465 IPR025866 Polymerase A arginine-rich C-terminal domain ISU55_03465 IPR010206 Poly(A) polymerase I ISU55_03470 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain ISU55_03470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_03470 IPR022380 Glutamyl-Q tRNA(Asp) synthetase ISU55_03470 IPR000924 Glutamyl/glutaminyl-tRNA synthetase ISU55_03475 IPR037187 DksA, N-terminal domain superfamily ISU55_03475 IPR012784 RNA polymerase-binding transcription factor DksA ISU55_03475 IPR000962 Zinc finger, DksA/TraR C4-type ISU55_03475 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria ISU55_03475 IPR020458 Zinc finger, DksA/TraR C4-type conserved site ISU55_03480 IPR041465 SfsA, N-terminal OB domain ISU55_03480 IPR040452 Sugar fermentation stimulation protein, C-terminal ISU55_03480 IPR005224 Sugar fermentation stimulation protein ISU55_03485 IPR009097 Cyclic phosphodiesterase ISU55_03485 IPR014051 Phosphoesterase, HXTX ISU55_03485 IPR004175 RNA 2',3'-cyclic phosphodiesterase ISU55_03490 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal ISU55_03490 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03490 IPR010225 ATP-dependent helicase HrpB ISU55_03490 IPR001650 Helicase, C-terminal ISU55_03490 IPR011545 DEAD/DEAH box helicase domain ISU55_03490 IPR007502 Helicase-associated domain ISU55_03490 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_03495 IPR023346 Lysozyme-like domain superfamily ISU55_03495 IPR036950 Penicillin binding protein transglycosylase domain ISU55_03495 IPR011813 Penicillin-binding protein 1B ISU55_03495 IPR012338 Beta-lactamase/transpeptidase-like ISU55_03495 IPR001460 Penicillin-binding protein, transpeptidase ISU55_03495 IPR028166 Bifunctional transglycosylase second domain ISU55_03495 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain ISU55_03495 IPR001264 Glycosyl transferase, family 51 ISU55_03500 IPR003593 AAA+ ATPase domain ISU55_03500 IPR017871 ABC transporter, conserved site ISU55_03500 IPR003439 ABC transporter-like ISU55_03500 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03505 IPR002491 ABC transporter periplasmic binding domain ISU55_03510 IPR037294 ABC transporter, BtuC-like ISU55_03510 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_03515 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase ISU55_03515 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_03515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_03515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_03515 IPR005814 Aminotransferase class-III ISU55_03520 IPR001807 Chloride channel, voltage gated ISU55_03520 IPR014743 Chloride channel, core ISU55_03520 IPR023861 Chloride channel, ClcA ISU55_03525 IPR035903 HesB-like domain superfamily ISU55_03525 IPR023063 FeS cluster insertion protein ErpA ISU55_03525 IPR017870 FeS cluster insertion, C-terminal, conserved site ISU55_03525 IPR016092 FeS cluster insertion protein ISU55_03525 IPR000361 FeS cluster biogenesis ISU55_03530 IPR005115 Uncharacterised domain UPF0126 ISU55_03535 IPR002491 ABC transporter periplasmic binding domain ISU55_03535 IPR023544 ABC transporter, vitamin B12-binding protein ISU55_03540 IPR010049 MTA/SAH nucleosidase ISU55_03540 IPR000845 Nucleoside phosphorylase domain ISU55_03540 IPR035994 Nucleoside phosphorylase superfamily ISU55_03545 IPR026875 Phosphohydrolase-associated domain ISU55_03545 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily ISU55_03545 IPR006261 dNTP triphosphohydrolase ISU55_03545 IPR006674 HD domain ISU55_03545 IPR003607 HD/PDEase domain ISU55_03545 IPR020779 dNTP triphosphohydrolase, type 1 ISU55_03550 IPR009003 Peptidase S1, PA clan ISU55_03550 IPR011782 Peptidase S1C, Do ISU55_03550 IPR036034 PDZ superfamily ISU55_03550 IPR001478 PDZ domain ISU55_03550 IPR001940 Peptidase S1C ISU55_03555 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_03555 IPR011006 CheY-like superfamily ISU55_03555 IPR003660 HAMP domain ISU55_03555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_03555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_03555 IPR019247 Histidine kinase BarA, N-terminal ISU55_03555 IPR036641 HPT domain superfamily ISU55_03555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_03555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ISU55_03555 IPR001789 Signal transduction response regulator, receiver domain ISU55_03555 IPR005467 Histidine kinase domain ISU55_03555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_03565 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD ISU55_03565 IPR010280 (Uracil-5)-methyltransferase family ISU55_03565 IPR030390 RNA methyltransferase TrmA, active site ISU55_03565 IPR030391 RNA methyltransferase TrmA, conserved site ISU55_03565 IPR012340 Nucleic acid-binding, OB-fold ISU55_03565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_03565 IPR002792 TRAM domain ISU55_03570 IPR002912 ACT domain ISU55_03570 IPR012675 Beta-grasp domain superfamily ISU55_03570 IPR003607 HD/PDEase domain ISU55_03570 IPR012676 TGS-like ISU55_03570 IPR033655 RelA, TGS domain ISU55_03570 IPR004811 RelA/SpoT family ISU55_03570 IPR004095 TGS ISU55_03570 IPR007685 RelA/SpoT ISU55_03575 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ISU55_03575 IPR011551 NTP pyrophosphohydrolase MazG ISU55_03580 IPR004468 CTP synthase ISU55_03580 IPR029062 Class I glutamine amidotransferase-like ISU55_03580 IPR017456 CTP synthase, N-terminal ISU55_03580 IPR017926 Glutamine amidotransferase ISU55_03580 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03580 IPR033828 CTP synthase GATase domain ISU55_03585 IPR020811 Enolase, N-terminal ISU55_03585 IPR020809 Enolase, conserved site ISU55_03585 IPR020810 Enolase, C-terminal TIM barrel domain ISU55_03585 IPR029017 Enolase-like, N-terminal ISU55_03585 IPR036849 Enolase-like, C-terminal domain superfamily ISU55_03585 IPR000941 Enolase ISU55_03590 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily ISU55_03590 IPR018152 Superoxide dismutase, copper/zinc, binding site ISU55_03590 IPR001424 Superoxide dismutase, copper/zinc binding domain ISU55_03590 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone ISU55_03595 IPR024924 7-carboxy-7-deazaguanine synthase-like ISU55_03595 IPR013785 Aldolase-type TIM barrel ISU55_03595 IPR007197 Radical SAM ISU55_03595 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria ISU55_03600 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily ISU55_03600 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family ISU55_03605 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase ISU55_03605 IPR029039 Flavoprotein-like superfamily ISU55_03605 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_03605 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily ISU55_03605 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_03605 IPR008254 Flavodoxin/nitric oxide synthase ISU55_03605 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain ISU55_03605 IPR017938 Riboflavin synthase-like beta-barrel ISU55_03605 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_03605 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria ISU55_03605 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding ISU55_03605 IPR001094 Flavodoxin-like ISU55_03610 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain ISU55_03610 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site ISU55_03610 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily ISU55_03610 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit ISU55_03610 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain ISU55_03640 IPR019478 Sirohaem synthase, dimerisation domain ISU55_03640 IPR006367 Sirohaem synthase, N-terminal ISU55_03640 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site ISU55_03640 IPR037115 Sirohaem synthase, dimerisation domain superfamily ISU55_03640 IPR036291 NAD(P)-binding domain superfamily ISU55_03640 IPR012409 Sirohaem synthase ISU55_03640 IPR006366 Uroporphyrin-III C-methyltransferase ISU55_03640 IPR028281 Siroheme synthase, central domain ISU55_03640 IPR014776 Tetrapyrrole methylase, subdomain 2 ISU55_03640 IPR014777 Tetrapyrrole methylase, subdomain 1 ISU55_03640 IPR035996 Tetrapyrrole methylase superfamily ISU55_03640 IPR000878 Tetrapyrrole methylase ISU55_03645 IPR011784 Sulphate adenylyltransferase, small subunit ISU55_03645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_03645 IPR002500 Phosphoadenosine phosphosulphate reductase ISU55_03650 IPR031157 Tr-type G domain, conserved site ISU55_03650 IPR011779 Sulphate adenylyltransferase, large subunit ISU55_03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03650 IPR005225 Small GTP-binding protein domain ISU55_03650 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain ISU55_03650 IPR000795 Transcription factor, GTP-binding domain ISU55_03650 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ISU55_03650 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_03655 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03655 IPR002891 Adenylyl-sulfate kinase ISU55_03660 IPR022721 Protein of unknown function DUF3561 ISU55_03665 IPR023081 Cell division protein FtsB ISU55_03665 IPR007060 Septum formation initiator FtsL/DivIC ISU55_03670 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU55_03670 IPR034683 Cytidylyltransferase IspD/TarI ISU55_03670 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site ISU55_03670 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_03675 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily ISU55_03675 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ISU55_03675 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site ISU55_03680 IPR001656 Pseudouridine synthase, TruD ISU55_03680 IPR042214 Pseudouridine synthase, TruD, catalytic domain ISU55_03680 IPR011760 Pseudouridine synthase, TruD, insertion domain ISU55_03680 IPR020119 Pseudouridine synthase TruD, conserved site ISU55_03680 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_03685 IPR030048 Survival protein SurE ISU55_03685 IPR002828 Survival protein SurE-like phosphatase/nucleotidase ISU55_03685 IPR036523 SurE-like phosphatase/nucleotidase superfamily ISU55_03690 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase ISU55_03690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_03695 IPR016047 Peptidase M23 ISU55_03695 IPR018392 LysM domain ISU55_03695 IPR011055 Duplicated hybrid motif ISU55_03695 IPR036779 LysM domain superfamily ISU55_03700 IPR009042 RNA polymerase sigma-70 region 1.2 ISU55_03700 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_03700 IPR012761 RNA polymerase sigma factor RpoS ISU55_03700 IPR013324 RNA polymerase sigma factor, region 3/4-like ISU55_03700 IPR013325 RNA polymerase sigma factor, region 2 ISU55_03700 IPR007630 RNA polymerase sigma-70 region 4 ISU55_03700 IPR007624 RNA polymerase sigma-70 region 3 ISU55_03700 IPR007627 RNA polymerase sigma-70 region 2 ISU55_03700 IPR000943 RNA polymerase sigma-70 ISU55_03700 IPR014284 RNA polymerase sigma-70 like domain ISU55_03705 IPR005748 DNA mismatch repair protein MutS ISU55_03705 IPR007695 DNA mismatch repair protein MutS-like, N-terminal ISU55_03705 IPR017261 DNA mismatch repair protein MutS/MSH ISU55_03705 IPR000432 DNA mismatch repair protein MutS, C-terminal ISU55_03705 IPR007861 DNA mismatch repair protein MutS, clamp ISU55_03705 IPR007696 DNA mismatch repair protein MutS, core ISU55_03705 IPR016151 DNA mismatch repair protein MutS, N-terminal ISU55_03705 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ISU55_03705 IPR007860 DNA mismatch repair protein MutS, connector domain ISU55_03705 IPR036678 MutS, connector domain superfamily ISU55_03705 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03710 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily ISU55_03710 IPR004785 Ribose 5-phosphate isomerase B ISU55_03710 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family ISU55_03715 IPR011032 GroES-like superfamily ISU55_03715 IPR013154 Alcohol dehydrogenase, N-terminal ISU55_03715 IPR020843 Polyketide synthase, enoylreductase domain ISU55_03715 IPR036291 NAD(P)-binding domain superfamily ISU55_03715 IPR013149 Alcohol dehydrogenase, C-terminal ISU55_03720 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_03720 IPR036291 NAD(P)-binding domain superfamily ISU55_03720 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_03725 IPR004006 DhaK domain ISU55_03730 IPR036117 DhaL domain superfamily ISU55_03730 IPR004007 DhaL domain ISU55_03730 IPR012737 Dihydroxyacetone kinase, subunit L ISU55_03735 IPR011991 ArsR-like helix-turn-helix domain ISU55_03735 IPR009057 Homeobox-like domain superfamily ISU55_03735 IPR025246 Transposase IS30-like HTH domain ISU55_03735 IPR037171 NagB/RpiA transferase-like ISU55_03735 IPR007324 Sugar-binding domain, putative ISU55_03740 IPR000802 Arsenical pump membrane protein, ArsB ISU55_03745 IPR018334 ArsR-type transcription regulator, HTH motif ISU55_03745 IPR011991 ArsR-like helix-turn-helix domain ISU55_03745 IPR001845 HTH ArsR-type DNA-binding domain ISU55_03745 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_03745 IPR036390 Winged helix DNA-binding domain superfamily ISU55_03760 IPR018313 Solute-binding protein family 3, conserved site ISU55_03760 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_03760 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter ISU55_03765 IPR004852 Di-haem cytochrome c peroxidase ISU55_03765 IPR036909 Cytochrome c-like domain superfamily ISU55_03765 IPR025992 Haem-binding domain ISU55_03765 IPR009056 Cytochrome c-like domain ISU55_03775 IPR010916 TonB box, conserved site ISU55_03775 IPR012910 TonB-dependent receptor, plug domain ISU55_03775 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_03775 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_03775 IPR010917 TonB-dependent receptor, conserved site ISU55_03775 IPR039426 Vitamin B12 transporter BtuB-like ISU55_03775 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_03785 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 ISU55_03785 IPR001714 Peptidase M24, methionine aminopeptidase ISU55_03785 IPR000994 Peptidase M24 ISU55_03785 IPR036005 Creatinase/aminopeptidase-like ISU55_03795 IPR020557 Fumarate lyase, conserved site ISU55_03795 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain ISU55_03795 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain ISU55_03795 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily ISU55_03795 IPR011167 Iron-dependent fumarate hydratase ISU55_03800 IPR000577 Carbohydrate kinase, FGGY ISU55_03800 IPR018483 Carbohydrate kinase, FGGY, conserved site ISU55_03800 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_03800 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_03805 IPR013022 Xylose isomerase-like, TIM barrel domain ISU55_03805 IPR036237 Xylose isomerase-like superfamily ISU55_03805 IPR001719 AP endonuclease 2 ISU55_03805 IPR004560 L-ribulose-5-phosphate 3-epimerase ISU55_03810 IPR001851 ABC transporter, permease ISU55_03815 IPR001851 ABC transporter, permease ISU55_03820 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03820 IPR015861 ABC transporter, ribose import, RbsA ISU55_03820 IPR003439 ABC transporter-like ISU55_03820 IPR003593 AAA+ ATPase domain ISU55_03820 IPR017871 ABC transporter, conserved site ISU55_03825 IPR036515 Transposase IS200-like superfamily ISU55_03825 IPR002686 Transposase IS200-like ISU55_03830 IPR001086 Prephenate dehydratase ISU55_03830 IPR010952 Chorismate mutase, gammaproteobacteria ISU55_03830 IPR036979 Chorismate mutase domain superfamily ISU55_03830 IPR036263 Chorismate mutase type II superfamily ISU55_03830 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase ISU55_03830 IPR002912 ACT domain ISU55_03830 IPR018528 Prephenate dehydratase, conserved site ISU55_03830 IPR002701 Chorismate mutase II, prokaryotic-type ISU55_03835 IPR011277 Chorismate mutase, T-protein ISU55_03835 IPR036979 Chorismate mutase domain superfamily ISU55_03835 IPR036291 NAD(P)-binding domain superfamily ISU55_03835 IPR003099 Prephenate dehydrogenase ISU55_03835 IPR036263 Chorismate mutase type II superfamily ISU55_03835 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein ISU55_03835 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_03835 IPR002701 Chorismate mutase II, prokaryotic-type ISU55_03840 IPR006219 DHAP synthase, class 1 ISU55_03840 IPR006218 DAHP synthetase I/KDSA ISU55_03840 IPR013785 Aldolase-type TIM barrel ISU55_03845 IPR011006 CheY-like superfamily ISU55_03845 IPR007492 LytTR DNA-binding domain ISU55_03845 IPR001789 Signal transduction response regulator, receiver domain ISU55_03855 IPR007433 Protein of unknown function DUF481 ISU55_03865 IPR036397 Ribonuclease H superfamily ISU55_03865 IPR012337 Ribonuclease H-like superfamily ISU55_03865 IPR006120 Resolvase, HTH domain ISU55_03865 IPR001584 Integrase, catalytic core ISU55_03865 IPR017894 HTH domain, IS21 transposase-type ISU55_03870 IPR003593 AAA+ ATPase domain ISU55_03870 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_03870 IPR002611 IstB-like ATP-binding protein ISU55_03870 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03870 IPR001270 ClpA/B family ISU55_03880 IPR038657 Ribosomal protein L19 superfamily ISU55_03880 IPR001857 Ribosomal protein L19 ISU55_03880 IPR018257 Ribosomal protein L19, conserved site ISU55_03880 IPR008991 Translation protein SH3-like domain superfamily ISU55_03885 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal ISU55_03885 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain ISU55_03885 IPR029028 Alpha/beta knot methyltransferases ISU55_03885 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_03885 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria ISU55_03890 IPR027275 PRC-barrel domain ISU55_03890 IPR011033 PRC-barrel-like superfamily ISU55_03890 IPR002676 RimM, N-terminal ISU55_03890 IPR036976 RimM, N-terminal domain superfamily ISU55_03890 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_03890 IPR011961 16S rRNA processing protein RimM ISU55_03895 IPR023803 Ribosomal protein S16 domain superfamily ISU55_03895 IPR020592 Ribosomal protein S16, conserved site ISU55_03895 IPR000307 Ribosomal protein S16 ISU55_03900 IPR003593 AAA+ ATPase domain ISU55_03900 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03900 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily ISU55_03900 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily ISU55_03900 IPR013822 Signal recognition particle SRP54, helical bundle ISU55_03900 IPR004125 Signal recognition particle, SRP54 subunit, M-domain ISU55_03900 IPR004780 Signal recognition particle protein ISU55_03900 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ISU55_03900 IPR022941 Signal recognition particle, SRP54 subunit ISU55_03905 IPR002541 Cytochrome c assembly protein ISU55_03910 IPR005170 Transporter-associated domain ISU55_03910 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_03910 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_03910 IPR000644 CBS domain ISU55_03910 IPR002550 CNNM, transmembrane domain ISU55_03915 IPR002686 Transposase IS200-like ISU55_03915 IPR036515 Transposase IS200-like superfamily ISU55_03920 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily ISU55_03920 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ISU55_03920 IPR003815 S-ribosylhomocysteinase (LuxS) ISU55_03925 IPR007370 Glutamate--cysteine ligase ISU55_03925 IPR006334 Glutamate--cysteine ligase, monofunctional ISU55_03925 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain ISU55_03930 IPR032816 SNARE associated Golgi protein ISU55_03935 IPR036412 HAD-like superfamily ISU55_03935 IPR023214 HAD superfamily ISU55_03935 IPR006439 HAD hydrolase, subfamily IA ISU55_03935 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_03935 IPR010976 Beta-phosphoglucomutase hydrolase ISU55_03935 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ISU55_03965 IPR036107 Carbon storage regulator superfamily ISU55_03965 IPR003751 Translational regulator CsrA ISU55_03970 IPR002318 Alanine-tRNA ligase, class IIc ISU55_03970 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain ISU55_03970 IPR012947 Threonyl/alanyl tRNA synthetase, SAD ISU55_03970 IPR003156 DHHA1 domain ISU55_03970 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria ISU55_03970 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily ISU55_03970 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal ISU55_03970 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily ISU55_03970 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_03975 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_03975 IPR003783 Regulatory protein RecX ISU55_03980 IPR013765 DNA recombination and repair protein RecA ISU55_03980 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain ISU55_03980 IPR023400 DNA recombination and repair protein RecA, C-terminal ISU55_03980 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface ISU55_03980 IPR020584 DNA recombination/repair protein RecA, conserved site ISU55_03980 IPR003593 AAA+ ATPase domain ISU55_03980 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_03985 IPR036653 CinA-like, C-terminal ISU55_03985 IPR008136 CinA, C-terminal ISU55_03990 IPR036259 MFS transporter superfamily ISU55_03990 IPR023745 MSF-type transporter, YcaD ISU55_03990 IPR020846 Major facilitator superfamily domain ISU55_03990 IPR011701 Major facilitator superfamily ISU55_04005 IPR042016 Apulose kinase ISU55_04005 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_04005 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_04005 IPR000577 Carbohydrate kinase, FGGY ISU55_04010 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ISU55_04010 IPR033248 Transketolase, C-terminal domain ISU55_04010 IPR005475 Transketolase-like, pyrimidine-binding domain ISU55_04010 IPR029061 Thiamin diphosphate-binding fold ISU55_04015 IPR029061 Thiamin diphosphate-binding fold ISU55_04015 IPR005474 Transketolase, N-terminal ISU55_04020 IPR001851 ABC transporter, permease ISU55_04025 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04025 IPR015861 ABC transporter, ribose import, RbsA ISU55_04025 IPR003593 AAA+ ATPase domain ISU55_04025 IPR003439 ABC transporter-like ISU55_04025 IPR017871 ABC transporter, conserved site ISU55_04035 IPR025997 Periplasmic binding protein ISU55_04035 IPR028082 Periplasmic binding protein-like I ISU55_04040 IPR010255 Haem peroxidase superfamily ISU55_04040 IPR002016 Haem peroxidase ISU55_04040 IPR000763 Catalase-peroxidase haem ISU55_04040 IPR019793 Peroxidases heam-ligand binding site ISU55_04040 IPR019794 Peroxidase, active site ISU55_04045 IPR010980 Cytochrome c/b562 ISU55_04045 IPR009155 Cytochrome b562 ISU55_04050 IPR016174 Di-haem cytochrome, transmembrane ISU55_04050 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase ISU55_04055 IPR028611 Tat proofreading chaperone DmsD ISU55_04055 IPR036411 TorD-like superfamily ISU55_04055 IPR026269 Tat proofreading chaperone DmsD-type ISU55_04055 IPR020945 DMSO/Nitrate reductase chaperone ISU55_04060 IPR007059 DMSO reductase anchor subunit (DmsC) ISU55_04065 IPR014297 Dimethylsulphoxide reductase, chain B ISU55_04065 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_04065 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_04070 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE ISU55_04070 IPR009010 Aspartate decarboxylase-like domain superfamily ISU55_04070 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site ISU55_04070 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site ISU55_04070 IPR006657 Molybdopterin dinucleotide-binding domain ISU55_04070 IPR006656 Molybdopterin oxidoreductase ISU55_04070 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ISU55_04070 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ISU55_04070 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_04075 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD ISU55_04075 IPR001303 Class II aldolase/adducin N-terminal ISU55_04075 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ISU55_04075 IPR004661 L-ribulose-5-phosphate 4-epimerase ISU55_04080 IPR037171 NagB/RpiA transferase-like ISU55_04080 IPR001034 DeoR-type HTH domain ISU55_04080 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ISU55_04080 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_04080 IPR036390 Winged helix DNA-binding domain superfamily ISU55_04080 IPR014036 DeoR C-terminal sensor domain ISU55_04090 IPR036515 Transposase IS200-like superfamily ISU55_04090 IPR002686 Transposase IS200-like ISU55_04095 IPR036567 Ribosome hibernation promotion factor-like ISU55_04095 IPR003489 Ribosome hibernation promoting factor/RaiA ISU55_04100 IPR017689 Outer membrane protein assembly factor BamD ISU55_04100 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_04100 IPR039565 Outer membrane lipoprotein BamD-like ISU55_04105 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_04105 IPR006145 Pseudouridine synthase, RsuA/RluA ISU55_04105 IPR002942 RNA-binding S4 domain ISU55_04105 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ISU55_04105 IPR006225 Pseudouridine synthase, RluC/RluD ISU55_04105 IPR036986 RNA-binding S4 domain superfamily ISU55_04110 IPR003730 Multi-copper polyphenol oxidoreductase ISU55_04110 IPR038371 Multi-copper polyphenol oxidoreductase superfamily ISU55_04110 IPR011324 Cytotoxic necrotizing factor-like, catalytic ISU55_04115 IPR004176 Clp, N-terminal ISU55_04115 IPR003593 AAA+ ATPase domain ISU55_04115 IPR003959 ATPase, AAA-type, core ISU55_04115 IPR017730 Chaperonin ClpB ISU55_04115 IPR019489 Clp ATPase, C-terminal ISU55_04115 IPR036628 Clp, N-terminal domain superfamily ISU55_04115 IPR001270 ClpA/B family ISU55_04115 IPR018368 ClpA/B, conserved site 1 ISU55_04115 IPR028299 ClpA/B, conserved site 2 ISU55_04115 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04115 IPR041546 ClpA/ClpB, AAA lid domain ISU55_04145 IPR017028 Uncharacterised conserved protein UCP034456 ISU55_04145 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein ISU55_04150 IPR025202 Phospholipase D-like domain ISU55_04150 IPR001736 Phospholipase D/Transphosphatidylase ISU55_04150 IPR016270 CDP-alcohol phosphatidyltransferase class-II family ISU55_04155 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ISU55_04155 IPR013815 ATP-grasp fold, subdomain 1 ISU55_04155 IPR011761 ATP-grasp fold ISU55_04155 IPR016102 Succinyl-CoA synthetase-like ISU55_04155 IPR003781 CoA-binding ISU55_04155 IPR000182 GNAT domain ISU55_04155 IPR016181 Acyl-CoA N-acyltransferase ISU55_04155 IPR036291 NAD(P)-binding domain superfamily ISU55_04160 IPR005636 DTW ISU55_04160 IPR039262 DTW domain-containing protein 2 ISU55_04165 IPR013766 Thioredoxin domain ISU55_04165 IPR017937 Thioredoxin, conserved site ISU55_04165 IPR036249 Thioredoxin-like superfamily ISU55_04165 IPR005746 Thioredoxin ISU55_04170 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted ISU55_04170 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ISU55_04170 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_04170 IPR029064 50S ribosomal protein L30e-like ISU55_04170 IPR029028 Alpha/beta knot methyltransferases ISU55_04170 IPR001537 tRNA/rRNA methyltransferase, SpoU type ISU55_04170 IPR004441 RNA methyltransferase TrmH family ISU55_04175 IPR036259 MFS transporter superfamily ISU55_04175 IPR020846 Major facilitator superfamily domain ISU55_04175 IPR011701 Major facilitator superfamily ISU55_04175 IPR004638 Drug resistance transporter EmrB-like ISU55_04180 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_04180 IPR005694 Efflux pump membrane protein ISU55_04185 IPR023187 Transcriptional regulator MarR-type, conserved site ISU55_04185 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_04185 IPR036390 Winged helix DNA-binding domain superfamily ISU55_04185 IPR000835 MarR-type HTH domain ISU55_04190 IPR008407 Branched-chain amino acid transport, AzlD ISU55_04195 IPR011606 Branched-chain amino acid transport, permease ISU55_04200 IPR011701 Major facilitator superfamily ISU55_04200 IPR020846 Major facilitator superfamily domain ISU55_04200 IPR036259 MFS transporter superfamily ISU55_04210 IPR014087 1-carboxybiuret hydrolase, AtzE subunit ISU55_04210 IPR036928 Amidase signature (AS) superfamily ISU55_04210 IPR023631 Amidase signature domain ISU55_04210 IPR000120 Amidase ISU55_04225 IPR001320 Ionotropic glutamate receptor ISU55_04225 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_04225 IPR018313 Solute-binding protein family 3, conserved site ISU55_04225 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter ISU55_04230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_04230 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_04230 IPR035906 MetI-like superfamily ISU55_04235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_04235 IPR035906 MetI-like superfamily ISU55_04235 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_04240 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04240 IPR003593 AAA+ ATPase domain ISU55_04240 IPR003439 ABC transporter-like ISU55_04240 IPR017871 ABC transporter, conserved site ISU55_04240 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ISU55_04245 IPR000192 Aminotransferase class V domain ISU55_04245 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ISU55_04245 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_04245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_04245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_04245 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase ISU55_04250 IPR002611 IstB-like ATP-binding protein ISU55_04250 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_04250 IPR001270 ClpA/B family ISU55_04250 IPR003593 AAA+ ATPase domain ISU55_04250 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04255 IPR017894 HTH domain, IS21 transposase-type ISU55_04255 IPR001584 Integrase, catalytic core ISU55_04255 IPR006120 Resolvase, HTH domain ISU55_04255 IPR012337 Ribonuclease H-like superfamily ISU55_04255 IPR036397 Ribonuclease H superfamily ISU55_04260 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ISU55_04260 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_04260 IPR000192 Aminotransferase class V domain ISU55_04260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_04260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_04260 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase ISU55_04265 IPR036264 Bacterial exopeptidase dimerisation domain ISU55_04265 IPR010158 Amidase, carbamoylase-type ISU55_04265 IPR011650 Peptidase M20, dimerisation domain ISU55_04265 IPR002933 Peptidase M20 ISU55_04275 IPR005565 Haemolysin activator HlyB, C-terminal ISU55_04275 IPR013686 Polypeptide-transport-associated, ShlB-type ISU55_04275 IPR034746 POTRA domain ISU55_04285 IPR040542 HMW1 domain 2 ISU55_04285 IPR041109 HMW1C N-terminal ISU55_04295 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type ISU55_04295 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ISU55_04295 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ISU55_04295 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ISU55_04295 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ISU55_04295 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ISU55_04300 IPR001347 Sugar isomerase (SIS) ISU55_04300 IPR035461 GmhA/DiaA ISU55_04300 IPR004515 Phosphoheptose isomerase ISU55_04305 IPR026869 Putative glutamine amidotransferase type 2 ISU55_04305 IPR029055 Nucleophile aminohydrolases, N-terminal ISU55_04305 IPR017932 Glutamine amidotransferase type 2 domain ISU55_04310 IPR005490 L,D-transpeptidase catalytic domain ISU55_04310 IPR038063 L,D-transpeptidase catalytic domain-like ISU55_04315 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain ISU55_04315 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A ISU55_04320 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B ISU55_04320 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD ISU55_04325 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C ISU55_04325 IPR007329 FMN-binding ISU55_04330 IPR003667 NqrDE/RnfAE ISU55_04330 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D ISU55_04335 IPR003667 NqrDE/RnfAE ISU55_04335 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E ISU55_04340 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F ISU55_04340 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_04340 IPR017938 Riboflavin synthase-like beta-barrel ISU55_04340 IPR012675 Beta-grasp domain superfamily ISU55_04340 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ISU55_04340 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_04340 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase ISU55_04340 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_04340 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_04340 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_04345 IPR003374 ApbE-like superfamily ISU55_04345 IPR042159 Flavin-trafficking protein ApbE ISU55_04345 IPR024932 Flavin transferase ApbE ISU55_04355 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ISU55_04355 IPR030395 Glycerophosphodiester phosphodiesterase domain ISU55_04360 IPR024728 DNA polymerase type-Y, HhH motif ISU55_04360 IPR036775 DNA polymerase, Y-family, little finger domain superfamily ISU55_04360 IPR017961 DNA polymerase, Y-family, little finger domain ISU55_04360 IPR001126 UmuC domain ISU55_04360 IPR022880 DNA polymerase IV ISU55_04365 IPR001160 Peptidase M20C, Xaa-His dipeptidase ISU55_04365 IPR002933 Peptidase M20 ISU55_04365 IPR011650 Peptidase M20, dimerisation domain ISU55_04370 IPR005119 LysR, substrate-binding ISU55_04370 IPR000847 Transcription regulator HTH, LysR ISU55_04370 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_04370 IPR036390 Winged helix DNA-binding domain superfamily ISU55_04385 IPR000836 Phosphoribosyltransferase domain ISU55_04385 IPR023747 Xanthine-guanine phosphoribosyltransferase ISU55_04385 IPR029057 Phosphoribosyltransferase-like ISU55_04390 IPR029058 Alpha/Beta hydrolase fold ISU55_04390 IPR010520 UPF0255 family ISU55_04395 IPR038208 Sigma factor-binding protein Crl superfamily ISU55_04395 IPR009986 Sigma factor-binding transcriptional regulator Crl ISU55_04400 IPR041739 Glutamate-5-kinase domain ISU55_04400 IPR001057 Glutamate/acetylglutamate kinase ISU55_04400 IPR011529 Glutamate 5-kinase ISU55_04400 IPR036393 Acetylglutamate kinase-like superfamily ISU55_04400 IPR015947 PUA-like superfamily ISU55_04400 IPR036974 PUA domain superfamily ISU55_04400 IPR002478 PUA domain ISU55_04400 IPR019797 Glutamate 5-kinase, conserved site ISU55_04400 IPR001048 Aspartate/glutamate/uridylate kinase ISU55_04400 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase ISU55_04405 IPR001270 ClpA/B family ISU55_04405 IPR003593 AAA+ ATPase domain ISU55_04405 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_04405 IPR002611 IstB-like ATP-binding protein ISU55_04405 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04410 IPR006120 Resolvase, HTH domain ISU55_04410 IPR017894 HTH domain, IS21 transposase-type ISU55_04410 IPR001584 Integrase, catalytic core ISU55_04410 IPR012337 Ribonuclease H-like superfamily ISU55_04410 IPR036397 Ribonuclease H superfamily ISU55_04415 IPR016162 Aldehyde dehydrogenase, N-terminal ISU55_04415 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_04415 IPR015590 Aldehyde dehydrogenase domain ISU55_04415 IPR012134 Glutamate-5-semialdehyde dehydrogenase ISU55_04415 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site ISU55_04415 IPR016163 Aldehyde dehydrogenase, C-terminal ISU55_04415 IPR000965 GPR domain ISU55_04420 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal ISU55_04420 IPR023787 Type III secretion system flagellar brake protein YcgR ISU55_04420 IPR009875 PilZ domain ISU55_04420 IPR012349 FMN-binding split barrel ISU55_04430 IPR013216 Methyltransferase type 11 ISU55_04430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_04440 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04440 IPR023000 Shikimate kinase, conserved site ISU55_04440 IPR031322 Shikimate kinase/gluconokinase ISU55_04440 IPR000623 Shikimate kinase/Threonine synthase-like 1 ISU55_04440 IPR027544 Shikimate kinase 2 ISU55_04445 IPR014710 RmlC-like jelly roll fold ISU55_04445 IPR011051 RmlC-like cupin domain superfamily ISU55_04445 IPR009664 Pyrimidine/purine nucleoside phosphorylase ISU55_04450 IPR007476 Putative exonuclease, RdgC ISU55_04455 IPR000600 ROK family ISU55_04460 IPR004592 Nuclease SbcC, gammaproteobacteria type ISU55_04460 IPR038729 Rad50/SbcC-type AAA domain ISU55_04460 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04465 IPR029052 Metallo-dependent phosphatase-like ISU55_04465 IPR004593 Nuclease SbcCD subunit D ISU55_04465 IPR026843 Nuclease SbcCD subunit D, C-terminal domain ISU55_04465 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ISU55_04465 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain ISU55_04470 IPR011006 CheY-like superfamily ISU55_04470 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_04470 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_04470 IPR039420 Transcriptional regulatory protein WalR-like ISU55_04470 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB ISU55_04470 IPR001789 Signal transduction response regulator, receiver domain ISU55_04475 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR ISU55_04475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_04475 IPR021766 Phosphate regulon sensor protein PhoR ISU55_04475 IPR013767 PAS fold ISU55_04475 IPR035965 PAS domain superfamily ISU55_04475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_04475 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_04475 IPR005467 Histidine kinase domain ISU55_04475 IPR000014 PAS domain ISU55_04475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_04475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_04480 IPR011862 Phosphate binding protein ISU55_04480 IPR024370 PBP domain ISU55_04485 IPR004685 Branched-chain amino acid transport system II carrier protein ISU55_04490 IPR004840 Amino acid permease, conserved site ISU55_04490 IPR004841 Amino acid permease/ SLC12A domain ISU55_04495 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain ISU55_04495 IPR017853 Glycoside hydrolase superfamily ISU55_04495 IPR017069 Maltodextrin glucosidase ISU55_04495 IPR014756 Immunoglobulin E-set ISU55_04495 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ISU55_04495 IPR013780 Glycosyl hydrolase, all-beta ISU55_04505 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_04505 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ISU55_04505 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_04505 IPR036291 NAD(P)-binding domain superfamily ISU55_04510 IPR029055 Nucleophile aminohydrolases, N-terminal ISU55_04510 IPR000101 Gamma-glutamyltranspeptidase ISU55_04515 IPR013766 Thioredoxin domain ISU55_04515 IPR036249 Thioredoxin-like superfamily ISU55_04515 IPR019479 Peroxiredoxin, C-terminal ISU55_04515 IPR024706 Peroxiredoxin, AhpC-type ISU55_04515 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ISU55_04520 IPR007431 Acyl carrier protein phosphodiesterase ISU55_04520 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria ISU55_04525 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily ISU55_04525 IPR042119 QueA, domain 2 ISU55_04525 IPR042118 QueA, domain 1 ISU55_04525 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA ISU55_04530 IPR036511 Queuine tRNA-ribosyltransferase-like ISU55_04530 IPR004803 tRNA-guanine transglycosylase ISU55_04530 IPR002616 tRNA-guanine(15) transglycosylase-like ISU55_04535 IPR003849 Preprotein translocase YajC ISU55_04540 IPR005791 Protein translocase subunit SecD ISU55_04540 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ISU55_04540 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ISU55_04540 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ISU55_04540 IPR027398 SecD export protein N-terminal TM domain ISU55_04545 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ISU55_04545 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ISU55_04545 IPR005665 Protein-export membrane protein SecF, bacterial ISU55_04545 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ISU55_04550 IPR036515 Transposase IS200-like superfamily ISU55_04550 IPR002686 Transposase IS200-like ISU55_04565 IPR003796 Ribonucleotide reductase regulator NrdR-like ISU55_04565 IPR005144 ATP-cone domain ISU55_04570 IPR011549 Riboflavin-specific deaminase, C-terminal ISU55_04570 IPR004794 Riboflavin biosynthesis protein RibD ISU55_04570 IPR024072 Dihydrofolate reductase-like domain superfamily ISU55_04570 IPR016193 Cytidine deaminase-like ISU55_04570 IPR002125 Cytidine and deoxycytidylate deaminase domain ISU55_04570 IPR016192 APOBEC/CMP deaminase, zinc-binding ISU55_04570 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal ISU55_04575 IPR036467 Lumazine/riboflavin synthase superfamily ISU55_04575 IPR034964 Lumazine synthase ISU55_04575 IPR002180 Lumazine/riboflavin synthase ISU55_04580 IPR006027 NusB/RsmB/TIM44 ISU55_04580 IPR011605 NusB antitermination factor ISU55_04580 IPR035926 NusB-like superfamily ISU55_04585 IPR010918 PurM-like, C-terminal domain ISU55_04585 IPR036676 PurM-like, C-terminal domain superfamily ISU55_04585 IPR006283 Thiamine-monophosphate kinase ISU55_04585 IPR016188 PurM-like, N-terminal domain ISU55_04585 IPR036921 PurM-like, N-terminal domain superfamily ISU55_04590 IPR036681 PgpA-like superfamily ISU55_04590 IPR026037 Phosphatidylglycerophosphatase A ISU55_04590 IPR007686 YutG/PgpA domain ISU55_04595 IPR036515 Transposase IS200-like superfamily ISU55_04595 IPR002686 Transposase IS200-like ISU55_04600 IPR033248 Transketolase, C-terminal domain ISU55_04600 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ISU55_04600 IPR029061 Thiamin diphosphate-binding fold ISU55_04600 IPR005477 Deoxyxylulose-5-phosphate synthase ISU55_04600 IPR005474 Transketolase, N-terminal ISU55_04600 IPR020826 Transketolase binding site ISU55_04600 IPR005475 Transketolase-like, pyrimidine-binding domain ISU55_04605 IPR008949 Isoprenoid synthase domain superfamily ISU55_04605 IPR033749 Polyprenyl synthetase, conserved site ISU55_04605 IPR000092 Polyprenyl synthetase ISU55_04610 IPR003761 Exonuclease VII, small subunit ISU55_04610 IPR037004 Exonuclease VII, small subunit superfamily ISU55_04615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_04615 IPR026340 Thiazole biosynthesis domain ISU55_04615 IPR020536 Thil, AANH domain ISU55_04615 IPR004114 THUMP domain ISU55_04615 IPR003720 tRNA sulfurtransferase ThiI ISU55_04615 IPR036873 Rhodanese-like domain superfamily ISU55_04615 IPR001763 Rhodanese-like domain ISU55_04620 IPR002818 DJ-1/PfpI ISU55_04620 IPR029062 Class I glutamine amidotransferase-like ISU55_04620 IPR006287 Protein/nucleic acid deglycase DJ-1 ISU55_04625 IPR003710 Ketopantoate reductase ApbA/PanE ISU55_04625 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_04625 IPR036291 NAD(P)-binding domain superfamily ISU55_04625 IPR013332 Ketopantoate reductase, N-terminal domain ISU55_04625 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_04625 IPR013752 Ketopantoate reductase, C-terminal domain ISU55_04630 IPR035571 UPF0234-like, C-terminal ISU55_04630 IPR035570 UPF0234, N-terminal ISU55_04630 IPR036183 YajQ-like superfamily ISU55_04630 IPR007551 Protein of unknown function DUF520 ISU55_04635 IPR036259 MFS transporter superfamily ISU55_04635 IPR011701 Major facilitator superfamily ISU55_04635 IPR020846 Major facilitator superfamily domain ISU55_04640 IPR030470 UbiA prenyltransferase conserved site ISU55_04640 IPR000537 UbiA prenyltransferase family ISU55_04640 IPR006369 Protohaem IX farnesyltransferase ISU55_04645 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes ISU55_04645 IPR014210 Cytochrome o ubiquinol oxidase subunit IV ISU55_04650 IPR000298 Cytochrome c oxidase subunit III-like ISU55_04650 IPR035973 Cytochrome c oxidase subunit III-like superfamily ISU55_04650 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle ISU55_04650 IPR014206 Cytochrome o ubiquinol oxidase, subunit III ISU55_04650 IPR033946 Ubiquinol oxidase subunit III domain ISU55_04650 IPR024791 Cytochrome c oxidase subunit III ISU55_04655 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site ISU55_04655 IPR014207 Cytochrome o ubiquinol oxidase, subunit I ISU55_04655 IPR036927 Cytochrome c oxidase-like, subunit I superfamily ISU55_04655 IPR023616 Cytochrome c oxidase-like, subunit I domain ISU55_04655 IPR000883 Cytochrome c oxidase subunit I ISU55_04660 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain ISU55_04660 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain ISU55_04660 IPR008972 Cupredoxin ISU55_04660 IPR010514 COX aromatic rich motif ISU55_04660 IPR002429 Cytochrome c oxidase subunit II-like C-terminal ISU55_04660 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily ISU55_04660 IPR006333 Cytochrome o ubiquinol oxidase subunit II ISU55_04665 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like ISU55_04665 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily ISU55_04670 IPR036259 MFS transporter superfamily ISU55_04670 IPR020846 Major facilitator superfamily domain ISU55_04670 IPR011701 Major facilitator superfamily ISU55_04670 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 ISU55_04675 IPR005619 Uncharacterised protein family, YajG ISU55_04675 IPR012640 Membrane lipoprotein, lipid attachment site ISU55_04680 IPR036065 BolA-like superfamily ISU55_04680 IPR002634 BolA protein ISU55_04685 IPR037041 Trigger factor, C-terminal domain superfamily ISU55_04685 IPR027304 Trigger factor/SurA domain superfamily ISU55_04685 IPR008881 Trigger factor, ribosome-binding, bacterial ISU55_04685 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ISU55_04685 IPR036611 Trigger factor ribosome-binding domain superfamily ISU55_04685 IPR008880 Trigger factor, C-terminal ISU55_04685 IPR005215 Trigger factor ISU55_04690 IPR029045 ClpP/crotonase-like domain superfamily ISU55_04690 IPR001907 ATP-dependent Clp protease proteolytic subunit ISU55_04690 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ISU55_04690 IPR018215 ClpP, Ser active site ISU55_04690 IPR033135 ClpP, histidine active site ISU55_04695 IPR003593 AAA+ ATPase domain ISU55_04695 IPR003959 ATPase, AAA-type, core ISU55_04695 IPR004487 Clp protease, ATP-binding subunit ClpX ISU55_04695 IPR038366 Zinc finger, ClpX C4-type superfamily ISU55_04695 IPR019489 Clp ATPase, C-terminal ISU55_04695 IPR010603 Zinc finger, ClpX C4-type ISU55_04695 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04700 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_04700 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_04700 IPR015947 PUA-like superfamily ISU55_04700 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04700 IPR008268 Peptidase S16, active site ISU55_04700 IPR027543 Lon protease, bacterial ISU55_04700 IPR004815 Lon protease, bacterial/eukaryotic-type ISU55_04700 IPR008269 Peptidase S16, Lon proteolytic domain ISU55_04700 IPR027065 Lon protease ISU55_04700 IPR003111 Lon, substrate-binding domain ISU55_04700 IPR003593 AAA+ ATPase domain ISU55_04700 IPR003959 ATPase, AAA-type, core ISU55_04705 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ISU55_04705 IPR020816 Histone-like DNA-binding protein, conserved site ISU55_04705 IPR000119 Histone-like DNA-binding protein ISU55_04710 IPR002686 Transposase IS200-like ISU55_04710 IPR036515 Transposase IS200-like superfamily ISU55_04715 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ISU55_04715 IPR027304 Trigger factor/SurA domain superfamily ISU55_04715 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ISU55_04720 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ISU55_04720 IPR010994 RuvA domain 2-like ISU55_04720 IPR004509 Competence protein ComEA, helix-hairpin-helix domain ISU55_04725 IPR029069 HotDog domain superfamily ISU55_04725 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family ISU55_04730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_04730 IPR018317 Queuosine biosynthesis protein QueC ISU55_04735 IPR000914 Solute-binding protein family 5 domain ISU55_04735 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain ISU55_04735 IPR039424 Solute-binding protein family 5 ISU55_04740 IPR023938 HMP-PP phosphatase ISU55_04740 IPR000150 Cof family ISU55_04740 IPR036412 HAD-like superfamily ISU55_04740 IPR006379 HAD-superfamily hydrolase, subfamily IIB ISU55_04740 IPR023214 HAD superfamily ISU55_04745 IPR005856 Cysteine synthase ISU55_04745 IPR005859 Cysteine synthase CysK ISU55_04745 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_04745 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_04745 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ISU55_04750 IPR011991 ArsR-like helix-turn-helix domain ISU55_04750 IPR036390 Winged helix DNA-binding domain superfamily ISU55_04750 IPR019888 Transcription regulator AsnC-type ISU55_04750 IPR011008 Dimeric alpha-beta barrel ISU55_04750 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_04750 IPR000485 AsnC-type HTH domain ISU55_04750 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ISU55_04750 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ISU55_04755 IPR003593 AAA+ ATPase domain ISU55_04755 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_04755 IPR011527 ABC transporter type 1, transmembrane domain ISU55_04755 IPR039421 Type I protein exporter ISU55_04755 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04755 IPR017871 ABC transporter, conserved site ISU55_04755 IPR003439 ABC transporter-like ISU55_04760 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04760 IPR017871 ABC transporter, conserved site ISU55_04760 IPR003439 ABC transporter-like ISU55_04760 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_04760 IPR039421 Type I protein exporter ISU55_04760 IPR003593 AAA+ ATPase domain ISU55_04760 IPR011527 ABC transporter type 1, transmembrane domain ISU55_04765 IPR002187 Nitrogen regulatory protein PII ISU55_04765 IPR011322 Nitrogen regulatory PII-like, alpha/beta ISU55_04765 IPR017918 Nitrogen regulatory protein PII, conserved site ISU55_04765 IPR002332 Nitrogen regulatory protein P-II, urydylation site ISU55_04765 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ISU55_04770 IPR001905 Ammonium transporter ISU55_04770 IPR018047 Ammonium transporter, conserved site ISU55_04770 IPR029020 Ammonium/urea transporter ISU55_04770 IPR024041 Ammonium transporter AmtB-like domain ISU55_04775 IPR003703 Acyl-CoA thioesterase ISU55_04775 IPR029069 HotDog domain superfamily ISU55_04780 IPR039366 YscW/ExsB ISU55_04785 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ISU55_04785 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ISU55_04785 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_04795 IPR007985 Haemolysin expression modulating, HHA ISU55_04795 IPR036666 HHA superfamily ISU55_04800 IPR019693 Biofilm formation regulator YbaJ ISU55_04810 IPR000473 Ribosomal protein L36 ISU55_04810 IPR035977 Ribosomal protein L36 superfamily ISU55_04815 IPR042105 Ribosomal protein L31 superfamily ISU55_04815 IPR027493 Ribosomal protein L31 type B ISU55_04815 IPR002150 Ribosomal protein L31 ISU55_04815 IPR034704 L28p-like ISU55_04820 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 ISU55_04820 IPR001036 Acriflavin resistance protein ISU55_04820 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ISU55_04825 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_04825 IPR006143 RND efflux pump, membrane fusion protein ISU55_04830 IPR013572 Transcription regulator MAATS, C-terminal ISU55_04830 IPR001647 DNA-binding HTH domain, TetR-type ISU55_04830 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ISU55_04830 IPR009057 Homeobox-like domain superfamily ISU55_04830 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ISU55_04835 IPR003787 Sulphur relay, DsrE/F-like protein ISU55_04835 IPR027396 DsrEFH-like ISU55_04840 IPR023408 Mechanosensitive ion channel MscS domain superfamily ISU55_04840 IPR006686 Mechanosensitive ion channel MscS, conserved site ISU55_04840 IPR025692 Mechanosensitive ion channel inner membrane domain 1 ISU55_04840 IPR011066 Mechanosensitive ion channel MscS, C-terminal ISU55_04840 IPR023298 P-type ATPase, transmembrane domain superfamily ISU55_04840 IPR010920 LSM domain superfamily ISU55_04840 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ISU55_04840 IPR024393 Mechanosensitive ion channel MscS, porin domain ISU55_04840 IPR006685 Mechanosensitive ion channel MscS ISU55_04845 IPR019630 Protein of unknown function DUF2496, YbaM-related ISU55_04855 IPR007401 Protein of unknown function DUF454 ISU55_04860 IPR005764 Adenine phosphoribosyl transferase ISU55_04860 IPR000836 Phosphoribosyltransferase domain ISU55_04860 IPR029057 Phosphoribosyltransferase-like ISU55_04865 IPR003593 AAA+ ATPase domain ISU55_04865 IPR001270 ClpA/B family ISU55_04865 IPR012763 DNA polymerase III, subunit gamma/ tau ISU55_04865 IPR021029 DNA polymerase III, tau subunit, domain V ISU55_04865 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV ISU55_04865 IPR022754 DNA polymerase III, gamma subunit, domain III ISU55_04865 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ISU55_04865 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04865 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily ISU55_04870 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ISU55_04870 IPR004401 Nucleoid-associated protein YbaB/EbfC family ISU55_04875 IPR015967 Recombination protein RecR, conserved site ISU55_04875 IPR006171 TOPRIM domain ISU55_04875 IPR023628 Recombination protein RecR, C4-type zinc finger ISU55_04875 IPR023627 Recombination protein RecR ISU55_04875 IPR000093 DNA recombination protein RecR ISU55_04875 IPR034137 RecR, TOPRIM domain ISU55_04880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_04880 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_04880 IPR019805 Heat shock protein Hsp90, conserved site ISU55_04880 IPR020575 Heat shock protein Hsp90, N-terminal ISU55_04880 IPR001404 Heat shock protein Hsp90 family ISU55_04880 IPR037196 HSP90, C-terminal domain ISU55_04880 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_04885 IPR006259 Adenylate kinase subfamily ISU55_04885 IPR000850 Adenylate kinase/UMP-CMP kinase ISU55_04885 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_04885 IPR033690 Adenylate kinase, conserved site ISU55_04885 IPR007862 Adenylate kinase, active site lid domain ISU55_04890 IPR033644 Ferrochelatase, C-terminal ISU55_04890 IPR033659 Ferrochelatase, N-terminal ISU55_04890 IPR001015 Ferrochelatase ISU55_04890 IPR019772 Ferrochelatase, active site ISU55_04895 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_04895 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_04895 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_04895 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ISU55_04895 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site ISU55_04895 IPR012675 Beta-grasp domain superfamily ISU55_04895 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_04895 IPR017938 Riboflavin synthase-like beta-barrel ISU55_04895 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_04900 IPR005835 Nucleotidyl transferase domain ISU55_04900 IPR013446 Glucose-1-phosphate cytidylyltransferase ISU55_04900 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_04905 IPR013445 CDP-glucose 4,6-dehydratase ISU55_04905 IPR016040 NAD(P)-binding domain ISU55_04905 IPR036291 NAD(P)-binding domain superfamily ISU55_04910 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ISU55_04910 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_04910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_04910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_04915 IPR001509 NAD-dependent epimerase/dehydratase ISU55_04915 IPR036291 NAD(P)-binding domain superfamily ISU55_04945 IPR001296 Glycosyl transferase, family 1 ISU55_04945 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ISU55_04955 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase ISU55_04955 IPR036291 NAD(P)-binding domain superfamily ISU55_04955 IPR001509 NAD-dependent epimerase/dehydratase ISU55_04960 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_04960 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase ISU55_04960 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal ISU55_04960 IPR005835 Nucleotidyl transferase domain ISU55_04960 IPR014710 RmlC-like jelly roll fold ISU55_04960 IPR011051 RmlC-like cupin domain superfamily ISU55_04965 IPR001173 Glycosyltransferase 2-like ISU55_04965 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_04970 IPR005843 Alpha-D-phosphohexomutase, C-terminal ISU55_04970 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ISU55_04970 IPR005841 Alpha-D-phosphohexomutase superfamily ISU55_04970 IPR016066 Alpha-D-phosphohexomutase, conserved site ISU55_04970 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ISU55_04970 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ISU55_04970 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ISU55_04970 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ISU55_04975 IPR003856 Polysaccharide chain length determinant N-terminal domain ISU55_04980 IPR029056 Ribokinase-like ISU55_04980 IPR011611 Carbohydrate kinase PfkB ISU55_04980 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_04985 IPR036291 NAD(P)-binding domain superfamily ISU55_04985 IPR003148 Regulator of K+ conductance, N-terminal ISU55_04985 IPR038770 Sodium/solute symporter superfamily ISU55_04985 IPR004771 K+/H+ exchanger ISU55_04985 IPR006153 Cation/H+ exchanger ISU55_04990 IPR020846 Major facilitator superfamily domain ISU55_04990 IPR036259 MFS transporter superfamily ISU55_04990 IPR011701 Major facilitator superfamily ISU55_05005 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ISU55_05005 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily ISU55_05005 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain ISU55_05010 IPR002816 TraB family ISU55_05015 IPR018303 P-type ATPase, phosphorylation site ISU55_05015 IPR001757 P-type ATPase ISU55_05015 IPR023298 P-type ATPase, transmembrane domain superfamily ISU55_05015 IPR008250 P-type ATPase, A domain superfamily ISU55_05015 IPR023214 HAD superfamily ISU55_05015 IPR017969 Heavy-metal-associated, conserved site ISU55_05015 IPR006121 Heavy metal-associated domain, HMA ISU55_05015 IPR036163 Heavy metal-associated domain superfamily ISU55_05015 IPR023299 P-type ATPase, cytoplasmic domain N ISU55_05015 IPR027256 P-type ATPase, subfamily IB ISU55_05015 IPR036412 HAD-like superfamily ISU55_05020 IPR009061 Putative DNA-binding domain superfamily ISU55_05020 IPR011789 Cu(I)-responsive transcriptional regulator ISU55_05020 IPR000551 MerR-type HTH domain ISU55_05025 IPR002810 NfeD-like, C-terminal domain ISU55_05030 IPR036013 Band 7/SPFH domain superfamily ISU55_05030 IPR001107 Band 7 domain ISU55_05030 IPR032435 Band 7, C-terminal extension ISU55_05030 IPR018080 Band 7/stomatin-like, conserved site ISU55_05030 IPR001972 Stomatin family ISU55_05035 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_05035 IPR013766 Thioredoxin domain ISU55_05035 IPR036249 Thioredoxin-like superfamily ISU55_05040 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_05040 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_05040 IPR036291 NAD(P)-binding domain superfamily ISU55_05045 IPR008265 Lipase, GDSL, active site ISU55_05045 IPR013830 SGNH hydrolase-type esterase domain ISU55_05045 IPR036514 SGNH hydrolase superfamily ISU55_05050 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05050 IPR003439 ABC transporter-like ISU55_05050 IPR003593 AAA+ ATPase domain ISU55_05050 IPR017871 ABC transporter, conserved site ISU55_05055 IPR038766 Membrane component of ABC transporter, predicted ISU55_05060 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ISU55_05060 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain ISU55_05060 IPR011054 Rudiment single hybrid motif ISU55_05060 IPR016185 Pre-ATP-grasp domain superfamily ISU55_05060 IPR011761 ATP-grasp fold ISU55_05060 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit ISU55_05060 IPR013815 ATP-grasp fold, subdomain 1 ISU55_05065 IPR033747 Class I PurE ISU55_05065 IPR000031 PurE domain ISU55_05065 IPR024694 PurE, prokaryotic type ISU55_05065 IPR035893 PurE domain superfamily ISU55_05070 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ISU55_05070 IPR029052 Metallo-dependent phosphatase-like ISU55_05070 IPR010138 UDP-2,3-diacylglucosamine hydrolase ISU55_05075 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain ISU55_05075 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site ISU55_05075 IPR029000 Cyclophilin-like domain superfamily ISU55_05075 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase ISU55_05080 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase ISU55_05080 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ISU55_05080 IPR032678 tRNA synthetases class I, catalytic domain ISU55_05080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_05080 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR ISU55_05080 IPR015803 Cysteine-tRNA ligase ISU55_05085 IPR002686 Transposase IS200-like ISU55_05085 IPR036515 Transposase IS200-like superfamily ISU55_05090 IPR036986 RNA-binding S4 domain superfamily ISU55_05090 IPR002942 RNA-binding S4 domain ISU55_05095 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU55_05095 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site ISU55_05095 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU55_05095 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase ISU55_05095 IPR036291 NAD(P)-binding domain superfamily ISU55_05125 IPR013762 Integrase-like, catalytic domain superfamily ISU55_05125 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_05125 IPR010998 Integrase/recombinase, N-terminal ISU55_05125 IPR002104 Integrase, catalytic domain ISU55_05135 IPR000462 CDP-alcohol phosphatidyltransferase ISU55_05140 IPR000374 Phosphatidate cytidylyltransferase ISU55_05145 IPR016676 Phospholipid/glycerol acyltransferase, predicted ISU55_05145 IPR002123 Phospholipid/glycerol acyltransferase ISU55_05150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_05150 IPR029058 Alpha/Beta hydrolase fold ISU55_05150 IPR022744 Methyltransferase domain, putative ISU55_05150 IPR022742 Serine aminopeptidase, S33 ISU55_05155 IPR000387 Tyrosine specific protein phosphatases domain ISU55_05155 IPR016130 Protein-tyrosine phosphatase, active site ISU55_05155 IPR003595 Protein-tyrosine phosphatase, catalytic ISU55_05155 IPR000340 Dual specificity phosphatase, catalytic domain ISU55_05155 IPR029021 Protein-tyrosine phosphatase-like ISU55_05155 IPR020422 Dual specificity protein phosphatase domain ISU55_05170 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05170 IPR002611 IstB-like ATP-binding protein ISU55_05170 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_05170 IPR001270 ClpA/B family ISU55_05170 IPR003593 AAA+ ATPase domain ISU55_05175 IPR012337 Ribonuclease H-like superfamily ISU55_05175 IPR001584 Integrase, catalytic core ISU55_05175 IPR006120 Resolvase, HTH domain ISU55_05175 IPR017894 HTH domain, IS21 transposase-type ISU55_05175 IPR036397 Ribonuclease H superfamily ISU55_05180 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_05180 IPR000847 Transcription regulator HTH, LysR ISU55_05180 IPR005119 LysR, substrate-binding ISU55_05180 IPR036390 Winged helix DNA-binding domain superfamily ISU55_05185 IPR023210 NADP-dependent oxidoreductase domain ISU55_05185 IPR036812 NADP-dependent oxidoreductase domain superfamily ISU55_05185 IPR020471 Aldo/keto reductase ISU55_05190 IPR018170 Aldo/keto reductase, conserved site ISU55_05190 IPR020471 Aldo/keto reductase ISU55_05190 IPR023210 NADP-dependent oxidoreductase domain ISU55_05190 IPR036812 NADP-dependent oxidoreductase domain superfamily ISU55_05200 IPR001764 Glycoside hydrolase, family 3, N-terminal ISU55_05200 IPR013783 Immunoglobulin-like fold ISU55_05200 IPR017853 Glycoside hydrolase superfamily ISU55_05200 IPR026891 Fibronectin type III-like domain ISU55_05200 IPR019800 Glycoside hydrolase, family 3, active site ISU55_05200 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily ISU55_05200 IPR002772 Glycoside hydrolase family 3 C-terminal domain ISU55_05200 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily ISU55_05215 IPR001207 Transposase, mutator type ISU55_05235 IPR012332 P22 tailspike-like, C-terminal domain superfamily ISU55_05235 IPR011050 Pectin lyase fold/virulence factor ISU55_05235 IPR004899 Pertactin, central region ISU55_05235 IPR003991 Pertactin virulence factor family ISU55_05235 IPR036709 Autotransporter beta-domain superfamily ISU55_05235 IPR030930 Adhesin of bacterial autotransporter system ISU55_05235 IPR024973 ESPR domain ISU55_05235 IPR005546 Autotransporter beta-domain ISU55_05235 IPR006315 Outer membrane autotransporter barrel ISU55_05250 IPR036624 Hcp1-like superfamily ISU55_05250 IPR008514 Type VI secretion system effector, Hcp ISU55_05270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_05270 IPR038722 Ner, winged helix-turn-helix DNA-binding domain ISU55_05275 IPR011815 Penicillin-binding protein 1C ISU55_05275 IPR012338 Beta-lactamase/transpeptidase-like ISU55_05275 IPR001264 Glycosyl transferase, family 51 ISU55_05275 IPR023346 Lysozyme-like domain superfamily ISU55_05275 IPR036950 Penicillin binding protein transglycosylase domain ISU55_05275 IPR001460 Penicillin-binding protein, transpeptidase ISU55_05275 IPR009647 Penicillin-binding, C-terminal ISU55_05280 IPR002686 Transposase IS200-like ISU55_05280 IPR036515 Transposase IS200-like superfamily ISU55_05285 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain ISU55_05285 IPR011625 Alpha-2-macroglobulin, bait region domain ISU55_05285 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid ISU55_05285 IPR021868 Alpha-2-macroglobulin MG3 domain ISU55_05285 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain ISU55_05285 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain ISU55_05285 IPR002890 Macroglobulin domain ISU55_05285 IPR001599 Alpha-2-macroglobulin ISU55_05300 IPR010061 Methylmalonate-semialdehyde dehydrogenase ISU55_05300 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_05300 IPR016160 Aldehyde dehydrogenase, cysteine active site ISU55_05300 IPR016163 Aldehyde dehydrogenase, C-terminal ISU55_05300 IPR015590 Aldehyde dehydrogenase domain ISU55_05300 IPR016162 Aldehyde dehydrogenase, N-terminal ISU55_05305 IPR000399 TPP-binding enzyme, conserved site ISU55_05305 IPR029035 DHS-like NAD/FAD-binding domain superfamily ISU55_05305 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ISU55_05305 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase ISU55_05305 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes ISU55_05305 IPR029061 Thiamin diphosphate-binding fold ISU55_05305 IPR012000 Thiamine pyrophosphate enzyme, central domain ISU55_05305 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ISU55_05315 IPR025997 Periplasmic binding protein ISU55_05315 IPR028082 Periplasmic binding protein-like I ISU55_05320 IPR003439 ABC transporter-like ISU55_05320 IPR017871 ABC transporter, conserved site ISU55_05320 IPR015861 ABC transporter, ribose import, RbsA ISU55_05320 IPR003593 AAA+ ATPase domain ISU55_05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05325 IPR001851 ABC transporter, permease ISU55_05330 IPR030827 Inositol 2-dehydrogenase ISU55_05330 IPR036291 NAD(P)-binding domain superfamily ISU55_05330 IPR000683 Oxidoreductase, N-terminal ISU55_05330 IPR004104 Oxidoreductase, C-terminal ISU55_05335 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_05335 IPR030830 5-Dehydro-2-deoxygluconokinase ISU55_05335 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily ISU55_05335 IPR011611 Carbohydrate kinase PfkB ISU55_05335 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes ISU55_05335 IPR029056 Ribokinase-like ISU55_05340 IPR036237 Xylose isomerase-like superfamily ISU55_05340 IPR013022 Xylose isomerase-like, TIM barrel domain ISU55_05340 IPR030823 IolE/MocC family ISU55_05345 IPR011051 RmlC-like cupin domain superfamily ISU55_05345 IPR024203 5-deoxy-glucuronate isomerase, IolB ISU55_05345 IPR021120 KduI/IolB isomerase ISU55_05345 IPR023770 5-deoxy-glucuronate isomerase, Bacilli ISU55_05345 IPR014710 RmlC-like jelly roll fold ISU55_05355 IPR003593 AAA+ ATPase domain ISU55_05355 IPR039421 Type I protein exporter ISU55_05355 IPR017871 ABC transporter, conserved site ISU55_05355 IPR011527 ABC transporter type 1, transmembrane domain ISU55_05355 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_05355 IPR003439 ABC transporter-like ISU55_05355 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05380 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_05380 IPR000792 Transcription regulator LuxR, C-terminal ISU55_05385 IPR012340 Nucleic acid-binding, OB-fold ISU55_05385 IPR002059 Cold-shock protein, DNA-binding ISU55_05385 IPR019844 Cold-shock (CSD) domain ISU55_05385 IPR011129 Cold shock domain ISU55_05385 IPR012156 Cold shock, CspA ISU55_05390 IPR012156 Cold shock, CspA ISU55_05390 IPR012340 Nucleic acid-binding, OB-fold ISU55_05390 IPR002059 Cold-shock protein, DNA-binding ISU55_05390 IPR019844 Cold-shock (CSD) domain ISU55_05390 IPR011129 Cold shock domain ISU55_05395 IPR003691 Putative fluoride ion transporter CrcB ISU55_05400 IPR024905 Sec-independent protein translocase protein TatE ISU55_05400 IPR003369 Sec-independent protein translocase protein TatA/B/E ISU55_05400 IPR006312 Sec-independent protein translocase protein TatA/E ISU55_05405 IPR031691 Lipoyl synthase, N-terminal ISU55_05405 IPR003698 Lipoyl synthase ISU55_05405 IPR006638 Elp3/MiaB/NifB ISU55_05405 IPR013785 Aldolase-type TIM barrel ISU55_05405 IPR007197 Radical SAM ISU55_05410 IPR000544 Octanoyltransferase ISU55_05410 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ISU55_05410 IPR020605 Octanoyltransferase, conserved site ISU55_05415 IPR007454 Uncharacterised protein family UPF0250 ISU55_05415 IPR027471 YbeD-like domain superfamily ISU55_05420 IPR015956 Penicillin-binding protein, C-terminal domain superfamily ISU55_05420 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily ISU55_05420 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal ISU55_05420 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal ISU55_05420 IPR012338 Beta-lactamase/transpeptidase-like ISU55_05420 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A ISU55_05425 IPR034718 Endolytic peptidoglycan transglycosylase RlpA ISU55_05425 IPR007730 Sporulation-like domain ISU55_05425 IPR012997 Rare lipoprotein A ISU55_05425 IPR036908 RlpA-like domain superfamily ISU55_05425 IPR036680 Sporulation-like domain superfamily ISU55_05425 IPR009009 RlpA-like protein, double-psi beta-barrel domain ISU55_05430 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ISU55_05430 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB ISU55_05430 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ISU55_05435 IPR012338 Beta-lactamase/transpeptidase-like ISU55_05435 IPR017790 Penicillin-binding protein 2 ISU55_05435 IPR001460 Penicillin-binding protein, transpeptidase ISU55_05435 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ISU55_05435 IPR005311 Penicillin-binding protein, dimerisation domain ISU55_05440 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_05440 IPR003742 RNA methyltransferase RlmH ISU55_05440 IPR029028 Alpha/beta knot methyltransferases ISU55_05445 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ISU55_05450 IPR004821 Cytidyltransferase-like domain ISU55_05450 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase ISU55_05450 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_05455 IPR032780 DNA polymerase III subunit delta, C-terminal ISU55_05455 IPR010372 DNA polymerase III delta, N-terminal ISU55_05455 IPR005790 DNA polymerase III, delta subunit ISU55_05455 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05455 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ISU55_05460 IPR007485 LPS-assembly lipoprotein LptE ISU55_05465 IPR002302 Leucine-tRNA ligase ISU55_05465 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_05465 IPR002300 Aminoacyl-tRNA synthetase, class Ia ISU55_05465 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ISU55_05465 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ISU55_05465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_05465 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ISU55_05465 IPR025709 Leucyl-tRNA synthetase, editing domain ISU55_05470 IPR009912 Zinc-ribbon containing domain ISU55_05475 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05475 IPR017871 ABC transporter, conserved site ISU55_05475 IPR003439 ABC transporter-like ISU55_05475 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ISU55_05475 IPR003593 AAA+ ATPase domain ISU55_05480 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM ISU55_05480 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_05480 IPR035906 MetI-like superfamily ISU55_05480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_05485 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ ISU55_05485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_05485 IPR035906 MetI-like superfamily ISU55_05485 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_05490 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_05495 IPR003010 Carbon-nitrogen hydrolase ISU55_05495 IPR036526 Carbon-nitrogen hydrolase superfamily ISU55_05495 IPR004563 Apolipoprotein N-acyltransferase ISU55_05500 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_05500 IPR005170 Transporter-associated domain ISU55_05500 IPR000644 CBS domain ISU55_05500 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_05505 IPR023091 Metalloprotease catalytic domain superfamily, predicted ISU55_05505 IPR002036 Endoribonuclease YbeY ISU55_05505 IPR020549 Endoribonuclease YbeY, conserved site ISU55_05510 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05510 IPR003714 PhoH-like protein ISU55_05515 IPR007197 Radical SAM ISU55_05515 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB ISU55_05515 IPR038135 Methylthiotransferase, N-terminal domain superfamily ISU55_05515 IPR013848 Methylthiotransferase, N-terminal ISU55_05515 IPR020612 Methylthiotransferase, conserved site ISU55_05515 IPR005839 Methylthiotransferase ISU55_05515 IPR006638 Elp3/MiaB/NifB ISU55_05515 IPR002792 TRAM domain ISU55_05515 IPR023404 Radical SAM, alpha/beta horseshoe ISU55_05520 IPR002938 FAD-binding domain ISU55_05520 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_05520 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site ISU55_05520 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 ISU55_05555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_05555 IPR029055 Nucleophile aminohydrolases, N-terminal ISU55_05555 IPR033738 Asparagine synthase, N-terminal domain ISU55_05555 IPR001962 Asparagine synthase ISU55_05555 IPR006426 Asparagine synthase, glutamine-hydrolyzing ISU55_05555 IPR017932 Glutamine amidotransferase type 2 domain ISU55_05560 IPR036412 HAD-like superfamily ISU55_05560 IPR006357 HAD-superfamily hydrolase, subfamily IIA ISU55_05560 IPR023214 HAD superfamily ISU55_05565 IPR036390 Winged helix DNA-binding domain superfamily ISU55_05565 IPR000835 MarR-type HTH domain ISU55_05565 IPR000600 ROK family ISU55_05565 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_05570 IPR003764 N-acetylglucosamine-6-phosphate deacetylase ISU55_05570 IPR032466 Metal-dependent hydrolase ISU55_05570 IPR011059 Metal-dependent hydrolase, composite domain superfamily ISU55_05570 IPR006680 Amidohydrolase-related ISU55_05575 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase ISU55_05575 IPR004547 Glucosamine-6-phosphate isomerase ISU55_05575 IPR018321 Glucosamine-6-phosphate isomerase, conserved site ISU55_05575 IPR037171 NagB/RpiA transferase-like ISU55_05580 IPR036878 Glucose permease domain IIB ISU55_05580 IPR011055 Duplicated hybrid motif ISU55_05580 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component ISU55_05580 IPR001996 Phosphotransferase system, IIB component, type 1 ISU55_05580 IPR013013 Phosphotransferase system, EIIC component, type 1 ISU55_05580 IPR003352 Phosphotransferase system, EIIC ISU55_05580 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ISU55_05580 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ISU55_05585 IPR002686 Transposase IS200-like ISU55_05585 IPR036515 Transposase IS200-like superfamily ISU55_05590 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain ISU55_05590 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain ISU55_05590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_05590 IPR004514 Glutamine-tRNA synthetase ISU55_05590 IPR022861 Glutamine-tRNA ligase, bacterial ISU55_05590 IPR000924 Glutamyl/glutaminyl-tRNA synthetase ISU55_05590 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal ISU55_05590 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_05590 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily ISU55_05590 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily ISU55_05595 IPR023614 Porin domain superfamily ISU55_05595 IPR005318 Outer membrane porin, bacterial ISU55_05605 IPR002481 Ferric-uptake regulator ISU55_05605 IPR036390 Winged helix DNA-binding domain superfamily ISU55_05605 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_05610 IPR008254 Flavodoxin/nitric oxide synthase ISU55_05610 IPR001226 Flavodoxin, conserved site ISU55_05610 IPR010086 Flavodoxin, long chain ISU55_05610 IPR029039 Flavoprotein-like superfamily ISU55_05615 IPR002145 Ribbon-helix-helix protein, CopG ISU55_05615 IPR010985 Ribbon-helix-helix ISU55_05620 IPR029058 Alpha/Beta hydrolase fold ISU55_05620 IPR000073 Alpha/beta hydrolase fold-1 ISU55_05630 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_05630 IPR013762 Integrase-like, catalytic domain superfamily ISU55_05630 IPR025166 Integrase, DNA-binding domain ISU55_05630 IPR038488 Integrase, DNA-binding domain superfamily ISU55_05630 IPR010998 Integrase/recombinase, N-terminal ISU55_05630 IPR002104 Integrase, catalytic domain ISU55_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05645 IPR002611 IstB-like ATP-binding protein ISU55_05645 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_05645 IPR003593 AAA+ ATPase domain ISU55_05645 IPR001270 ClpA/B family ISU55_05650 IPR036397 Ribonuclease H superfamily ISU55_05650 IPR012337 Ribonuclease H-like superfamily ISU55_05650 IPR006120 Resolvase, HTH domain ISU55_05650 IPR001584 Integrase, catalytic core ISU55_05650 IPR017894 HTH domain, IS21 transposase-type ISU55_05665 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain ISU55_05670 IPR035906 MetI-like superfamily ISU55_05670 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_05675 IPR017871 ABC transporter, conserved site ISU55_05675 IPR000644 CBS domain ISU55_05675 IPR003439 ABC transporter-like ISU55_05675 IPR003593 AAA+ ATPase domain ISU55_05675 IPR005892 Glycine betaine transport ATP-binding subunit ISU55_05675 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05680 IPR026494 Ribonucleoside reductase subunit beta, NrdF ISU55_05680 IPR000358 Ribonucleotide reductase small subunit family ISU55_05680 IPR030475 Ribonucleotide reductase small subunit, acitve site ISU55_05680 IPR033909 Ribonucleotide reductase small subunit ISU55_05680 IPR009078 Ferritin-like superfamily ISU55_05680 IPR012348 Ribonucleotide reductase-like ISU55_05685 IPR039718 Ribonucleoside-diphosphate reductase large subunit ISU55_05685 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal ISU55_05685 IPR013509 Ribonucleotide reductase large subunit, N-terminal ISU55_05685 IPR013554 Ribonucleotide reductase N-terminal ISU55_05685 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE ISU55_05685 IPR013346 Ribonucleotide reductase, class I , alpha subunit ISU55_05685 IPR000788 Ribonucleotide reductase large subunit, C-terminal ISU55_05690 IPR029039 Flavoprotein-like superfamily ISU55_05690 IPR004465 Ribonucleotide reductase Class Ib, NrdI ISU55_05690 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial ISU55_05700 IPR009435 Acid shock ISU55_05700 IPR023497 Acid shock protein ISU55_05705 IPR018994 Protein of unknown function DUF2002 ISU55_05710 IPR009587 Protein of unknown function DUF1198 ISU55_05720 IPR012340 Nucleic acid-binding, OB-fold ISU55_05720 IPR012156 Cold shock, CspA ISU55_05720 IPR011129 Cold shock domain ISU55_05720 IPR019844 Cold-shock (CSD) domain ISU55_05720 IPR002059 Cold-shock protein, DNA-binding ISU55_05725 IPR039424 Solute-binding protein family 5 ISU55_05725 IPR030678 Peptide/nickel binding protein, MppA-type ISU55_05725 IPR000914 Solute-binding protein family 5 domain ISU55_05725 IPR023765 Solute-binding protein family 5, conserved site ISU55_05725 IPR011980 Nickel ABC transporter, substrate-binding protein NikA ISU55_05730 IPR035906 MetI-like superfamily ISU55_05730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_05735 IPR035906 MetI-like superfamily ISU55_05735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_05735 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ISU55_05740 IPR017871 ABC transporter, conserved site ISU55_05740 IPR015863 ABC transporter, hemin import, HmuV ISU55_05740 IPR003439 ABC transporter-like ISU55_05740 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05740 IPR003593 AAA+ ATPase domain ISU55_05745 IPR015858 ABC transporter, nickel import, NikE ISU55_05745 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05745 IPR014137 Nickel import ATP-binding protein NikE ISU55_05745 IPR017871 ABC transporter, conserved site ISU55_05745 IPR003439 ABC transporter-like ISU55_05745 IPR003593 AAA+ ATPase domain ISU55_05750 IPR002026 Urease, gamma/gamma-beta subunit ISU55_05750 IPR012010 Urease, gamma subunit ISU55_05750 IPR036463 Urease, gamma subunit superfamily ISU55_05755 IPR002019 Urease, beta subunit ISU55_05755 IPR036461 Urease, beta subunit superfamily ISU55_05760 IPR017951 Urease alpha subunit, C-terminal ISU55_05760 IPR011059 Metal-dependent hydrolase, composite domain superfamily ISU55_05760 IPR006680 Amidohydrolase-related ISU55_05760 IPR011612 Urease alpha-subunit, N-terminal domain ISU55_05760 IPR017950 Urease active site ISU55_05760 IPR029754 Urease nickel binding site ISU55_05760 IPR032466 Metal-dependent hydrolase ISU55_05760 IPR005848 Urease, alpha subunit ISU55_05765 IPR012406 Urease accessory protein UreE ISU55_05765 IPR036118 UreE urease accessory, N-terminal domain superfamily ISU55_05765 IPR004029 UreE urease accessory, N-terminal ISU55_05765 IPR007864 Urease accessory protein UreE, C-terminal domain ISU55_05770 IPR002639 Urease accessory protein UreF ISU55_05770 IPR038277 UreF domain superfamily ISU55_05775 IPR004400 Urease accessory protein UreG ISU55_05775 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05775 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ISU55_05785 IPR004937 Urea transporter ISU55_05785 IPR029020 Ammonium/urea transporter ISU55_05790 IPR004688 Transition metal uptake transporter nickel/cobalt ISU55_05790 IPR011541 Nickel/cobalt transporter, high-affinity ISU55_05795 IPR010486 HNS-dependent expression A/B ISU55_05795 IPR028623 HNS-dependent expression B ISU55_05795 IPR038303 HNS-dependent expression A/B superfamily ISU55_05800 IPR013099 Potassium channel domain ISU55_05800 IPR003148 Regulator of K+ conductance, N-terminal ISU55_05800 IPR036291 NAD(P)-binding domain superfamily ISU55_05805 IPR003691 Putative fluoride ion transporter CrcB ISU55_05810 IPR003691 Putative fluoride ion transporter CrcB ISU55_05820 IPR013012 Phosphotransferase system, EIIB component, type 3 ISU55_05820 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ISU55_05820 IPR036095 PTS system IIB component-like superfamily ISU55_05825 IPR004796 Phosphotransferase system, cellobiose-type IIC component ISU55_05825 IPR003352 Phosphotransferase system, EIIC ISU55_05825 IPR004501 Phosphotransferase system, EIIC component, type 3 ISU55_05830 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit ISU55_05830 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily ISU55_05835 IPR020449 Transcription regulator HTH, AraC- type ISU55_05835 IPR018062 HTH domain AraC-type, conserved site ISU55_05835 IPR014710 RmlC-like jelly roll fold ISU55_05835 IPR018060 DNA binding HTH domain, AraC-type ISU55_05835 IPR009057 Homeobox-like domain superfamily ISU55_05835 IPR013096 Cupin 2, conserved barrel ISU55_05835 IPR011051 RmlC-like cupin domain superfamily ISU55_05840 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ISU55_05840 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria ISU55_05840 IPR006879 Carbohydrate deacetylase YdjC-like ISU55_05850 IPR013321 Arc-type ribbon-helix-helix ISU55_05850 IPR010985 Ribbon-helix-helix ISU55_05850 IPR005621 Negative modulator of initiation of replication SeqA ISU55_05850 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain ISU55_05850 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal ISU55_05850 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily ISU55_05855 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ISU55_05855 IPR005843 Alpha-D-phosphohexomutase, C-terminal ISU55_05855 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ISU55_05855 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ISU55_05855 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ISU55_05855 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ISU55_05855 IPR016066 Alpha-D-phosphohexomutase, conserved site ISU55_05855 IPR005852 Phosphoglucomutase, alpha-D-glucose specific ISU55_05870 IPR011006 CheY-like superfamily ISU55_05870 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_05870 IPR001789 Signal transduction response regulator, receiver domain ISU55_05870 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_05870 IPR039420 Transcriptional regulatory protein WalR-like ISU55_05875 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_05875 IPR038318 KdpD, transmembrane domain superfamily ISU55_05875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_05875 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_05875 IPR005467 Histidine kinase domain ISU55_05875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_05875 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_05875 IPR029016 GAF-like domain superfamily ISU55_05875 IPR003018 GAF domain ISU55_05875 IPR025201 Sensor protein KdpD, transmembrane domain ISU55_05875 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal ISU55_05880 IPR003820 Potassium-transporting ATPase C chain ISU55_05885 IPR001757 P-type ATPase ISU55_05885 IPR006391 P-type ATPase, B chain, subfamily IA ISU55_05885 IPR036412 HAD-like superfamily ISU55_05885 IPR008250 P-type ATPase, A domain superfamily ISU55_05885 IPR018303 P-type ATPase, phosphorylation site ISU55_05885 IPR023298 P-type ATPase, transmembrane domain superfamily ISU55_05885 IPR023299 P-type ATPase, cytoplasmic domain N ISU55_05890 IPR004623 Potassium-transporting ATPase A chain ISU55_05905 IPR019663 Uncharacterised protein YbfA ISU55_05910 IPR013560 Domain of unknown function DUF1722 ISU55_05915 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily ISU55_05915 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily ISU55_05915 IPR002081 Cryptochrome/DNA photolyase class 1 ISU55_05915 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ISU55_05915 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ISU55_05915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_05915 IPR006050 DNA photolyase, N-terminal ISU55_05920 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site ISU55_05920 IPR000396 Cyclic-AMP phosphodiesterase, class-II ISU55_05920 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ISU55_05925 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ISU55_05925 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ISU55_05940 IPR003778 Carboxyltransferase domain, subdomain A and B ISU55_05940 IPR029000 Cyclophilin-like domain superfamily ISU55_05945 IPR005501 LamB/YcsF/PxpA-like ISU55_05945 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ISU55_05960 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily ISU55_05960 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like ISU55_05960 IPR033694 Pyroglutamyl peptidase I, Cys active site ISU55_05960 IPR033693 Pyroglutamyl peptidase I, Glu active site ISU55_05960 IPR000816 Peptidase C15, pyroglutamyl peptidase I ISU55_05960 IPR029762 Pyroglutamyl peptidase I, bacterial-type ISU55_05965 IPR002043 Uracil-DNA glycosylase family 1 ISU55_05965 IPR036895 Uracil-DNA glycosylase-like domain superfamily ISU55_05965 IPR018085 Uracil-DNA glycosylase, active site ISU55_05965 IPR005122 Uracil-DNA glycosylase-like ISU55_05970 IPR011140 Autonomous glycyl radical cofactor GrcA ISU55_05970 IPR001150 Glycine radical domain ISU55_05970 IPR019777 Formate C-acetyltransferase glycine radical, conserved site ISU55_05975 IPR029058 Alpha/Beta hydrolase fold ISU55_05980 IPR002110 Ankyrin repeat ISU55_05980 IPR020683 Ankyrin repeat-containing domain ISU55_05980 IPR036770 Ankyrin repeat-containing domain superfamily ISU55_05985 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_05985 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ISU55_05985 IPR001650 Helicase, C-terminal ISU55_05985 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_05985 IPR014014 RNA helicase, DEAD-box type, Q motif ISU55_05985 IPR028621 ATP-dependent RNA helicase SrmB ISU55_05985 IPR011545 DEAD/DEAH box helicase domain ISU55_05990 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_05990 IPR007848 Methyltransferase small domain ISU55_05990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_05990 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase ISU55_05995 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ISU55_05995 IPR005288 L-aspartate oxidase ISU55_05995 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal ISU55_05995 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily ISU55_05995 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_05995 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ISU55_06000 IPR007627 RNA polymerase sigma-70 region 2 ISU55_06000 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_06000 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ISU55_06000 IPR014284 RNA polymerase sigma-70 like domain ISU55_06000 IPR013324 RNA polymerase sigma factor, region 3/4-like ISU55_06000 IPR013325 RNA polymerase sigma factor, region 2 ISU55_06000 IPR039425 RNA polymerase sigma-70 like ISU55_06000 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ISU55_06000 IPR014286 RNA polymerase sigma-70 RpoE type ISU55_06005 IPR005572 Anti sigma-E protein RseA, N-terminal ISU55_06005 IPR005573 Anti sigma-E protein RseA, C-terminal ISU55_06005 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily ISU55_06005 IPR026279 Sigma-E factor negative regulatory protein RseA ISU55_06010 IPR005588 MucB/RseB ISU55_06010 IPR033434 MucB/RseB, N-terminal ISU55_06010 IPR038484 MucB/RseB, C-terminal domain superfamily ISU55_06010 IPR033436 MucB/RseB, C-terminal ISU55_06015 IPR026268 Protein RseC ISU55_06015 IPR007359 Positive regulator of sigma(E), RseC/MucC ISU55_06025 IPR006297 Elongation factor 4 ISU55_06025 IPR000795 Transcription factor, GTP-binding domain ISU55_06025 IPR035647 EF-G domain III/V-like ISU55_06025 IPR013842 GTP-binding protein LepA, C-terminal ISU55_06025 IPR000640 Elongation factor EFG, domain V-like ISU55_06025 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_06025 IPR031157 Tr-type G domain, conserved site ISU55_06025 IPR038363 LepA, C-terminal domain superfamily ISU55_06025 IPR005225 Small GTP-binding protein domain ISU55_06025 IPR035654 Elongation factor 4, domain IV ISU55_06025 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06030 IPR036286 LexA/Signal peptidase-like superfamily ISU55_06030 IPR019533 Peptidase S26 ISU55_06030 IPR000223 Peptidase S26A, signal peptidase I ISU55_06030 IPR019758 Peptidase S26A, signal peptidase I, conserved site ISU55_06030 IPR019757 Peptidase S26A, signal peptidase I, lysine active site ISU55_06030 IPR019756 Peptidase S26A, signal peptidase I, serine active site ISU55_06035 IPR000999 Ribonuclease III domain ISU55_06035 IPR011907 Ribonuclease III ISU55_06035 IPR036389 Ribonuclease III, endonuclease domain superfamily ISU55_06035 IPR014720 Double-stranded RNA-binding domain ISU55_06040 IPR004044 K Homology domain, type 2 ISU55_06040 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06040 IPR030388 Era-type guanine nucleotide-binding (G) domain ISU55_06040 IPR005662 GTP-binding protein Era ISU55_06040 IPR006073 GTP binding domain ISU55_06040 IPR015946 K homology domain-like, alpha/beta ISU55_06040 IPR005225 Small GTP-binding protein domain ISU55_06040 IPR009019 K homology domain superfamily, prokaryotic type ISU55_06045 IPR003717 Recombination protein O, RecO ISU55_06045 IPR012340 Nucleic acid-binding, OB-fold ISU55_06045 IPR022572 DNA replication/recombination mediator RecO, N-terminal ISU55_06045 IPR037278 ARFGAP/RecO-like zinc finger ISU55_06050 IPR036130 Pyridoxine 5'-phosphate synthase ISU55_06050 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ ISU55_06050 IPR013785 Aldolase-type TIM barrel ISU55_06055 IPR004568 Phosphopantetheine-protein transferase domain ISU55_06055 IPR002582 Holo-[acyl carrier protein] synthase ISU55_06055 IPR037143 4'-phosphopantetheinyl transferase domain superfamily ISU55_06055 IPR008278 4'-phosphopantetheinyl transferase domain ISU55_06060 IPR036515 Transposase IS200-like superfamily ISU55_06060 IPR002686 Transposase IS200-like ISU55_06065 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_06065 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_06070 IPR001347 Sugar isomerase (SIS) ISU55_06070 IPR009057 Homeobox-like domain superfamily ISU55_06070 IPR000281 Helix-turn-helix protein RpiR ISU55_06070 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_06070 IPR035472 RpiR-like, SIS domain ISU55_06075 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ ISU55_06075 IPR005486 Glucokinase regulatory protein, conserved site ISU55_06075 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein ISU55_06075 IPR001347 Sugar isomerase (SIS) ISU55_06075 IPR009060 UBA-like superfamily ISU55_06080 IPR036412 HAD-like superfamily ISU55_06080 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB ISU55_06080 IPR023214 HAD superfamily ISU55_06085 IPR016192 APOBEC/CMP deaminase, zinc-binding ISU55_06085 IPR002125 Cytidine and deoxycytidylate deaminase domain ISU55_06085 IPR028883 tRNA-specific adenosine deaminase ISU55_06085 IPR016193 Cytidine deaminase-like ISU55_06090 IPR008258 Transglycosylase SLT domain 1 ISU55_06090 IPR000189 Prokaryotic transglycosylase, active site ISU55_06090 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_06090 IPR023703 Membrane-bound lytic murein transglycosylase F ISU55_06090 IPR023346 Lysozyme-like domain superfamily ISU55_06095 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily ISU55_06095 IPR029062 Class I glutamine amidotransferase-like ISU55_06095 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal ISU55_06095 IPR010073 Phosphoribosylformylglycinamidine synthase PurL ISU55_06095 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain ISU55_06095 IPR010918 PurM-like, C-terminal domain ISU55_06095 IPR017926 Glutamine amidotransferase ISU55_06095 IPR036676 PurM-like, C-terminal domain superfamily ISU55_06095 IPR036921 PurM-like, N-terminal domain superfamily ISU55_06120 IPR036515 Transposase IS200-like superfamily ISU55_06120 IPR002686 Transposase IS200-like ISU55_06125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_06125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_06125 IPR005467 Histidine kinase domain ISU55_06125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_06125 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_06125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_06130 IPR025262 Quorum-sensing regulator protein G ISU55_06135 IPR009057 Homeobox-like domain superfamily ISU55_06135 IPR025944 Sigma-54 interaction domain, conserved site ISU55_06135 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_06135 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06135 IPR011006 CheY-like superfamily ISU55_06135 IPR002078 RNA polymerase sigma factor 54 interaction domain ISU55_06135 IPR003593 AAA+ ATPase domain ISU55_06135 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ISU55_06135 IPR001789 Signal transduction response regulator, receiver domain ISU55_06140 IPR000132 Nitrilase/cyanide hydratase, conserved site ISU55_06140 IPR036526 Carbon-nitrogen hydrolase superfamily ISU55_06140 IPR014445 Glutamine-dependent NAD(+) synthetase ISU55_06140 IPR022310 NAD/GMP synthase ISU55_06140 IPR003010 Carbon-nitrogen hydrolase ISU55_06140 IPR003694 NAD(+) synthetase ISU55_06140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_06145 IPR017918 Nitrogen regulatory protein PII, conserved site ISU55_06145 IPR011322 Nitrogen regulatory PII-like, alpha/beta ISU55_06145 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ISU55_06145 IPR002332 Nitrogen regulatory protein P-II, urydylation site ISU55_06145 IPR002187 Nitrogen regulatory protein PII ISU55_06155 IPR001584 Integrase, catalytic core ISU55_06155 IPR036397 Ribonuclease H superfamily ISU55_06155 IPR012337 Ribonuclease H-like superfamily ISU55_06155 IPR017894 HTH domain, IS21 transposase-type ISU55_06155 IPR006120 Resolvase, HTH domain ISU55_06160 IPR003593 AAA+ ATPase domain ISU55_06160 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06160 IPR001270 ClpA/B family ISU55_06160 IPR002611 IstB-like ATP-binding protein ISU55_06160 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_06170 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_06170 IPR009050 Globin-like superfamily ISU55_06170 IPR017938 Riboflavin synthase-like beta-barrel ISU55_06170 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_06170 IPR023950 Flavohemoprotein ISU55_06170 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ISU55_06170 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase ISU55_06170 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_06170 IPR012292 Globin/Protoglobin ISU55_06170 IPR000971 Globin ISU55_06175 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_06175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_06175 IPR039429 Serine hydroxymethyltransferase-like domain ISU55_06175 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site ISU55_06175 IPR001085 Serine hydroxymethyltransferase ISU55_06175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_06185 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_06185 IPR000758 Virulence-related outer membrane protein ISU55_06185 IPR027385 Outer membrane protein beta-barrel domain ISU55_06190 IPR024989 Major facilitator superfamily associated domain ISU55_06190 IPR026032 Probable 3-phenylpropionic acid transporter ISU55_06190 IPR036259 MFS transporter superfamily ISU55_06195 IPR036634 PRD domain superfamily ISU55_06195 IPR011608 PRD domain ISU55_06200 IPR016537 Uncharacterised conserved protein UCP008159, ISU55_06200 IPR010412 Protein of unknown function DUF1007 ISU55_06205 IPR011541 Nickel/cobalt transporter, high-affinity ISU55_06210 IPR033942 Inositol monophosphatase ISU55_06210 IPR020583 Inositol monophosphatase, metal-binding site ISU55_06210 IPR020550 Inositol monophosphatase, conserved site ISU55_06210 IPR022337 Inositol monophosphatase, SuhB ISU55_06210 IPR000760 Inositol monophosphatase-like ISU55_06215 IPR029028 Alpha/beta knot methyltransferases ISU55_06215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_06215 IPR001537 tRNA/rRNA methyltransferase, SpoU type ISU55_06215 IPR004384 RNA methyltransferase TrmJ/LasT ISU55_06225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_06225 IPR016454 Cysteine desulfurase ISU55_06225 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_06225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_06225 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ISU55_06225 IPR010240 Cysteine desulfurase IscS ISU55_06225 IPR000192 Aminotransferase class V domain ISU55_06230 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal ISU55_06230 IPR011339 ISC system FeS cluster assembly, IscU scaffold ISU55_06235 IPR011302 Iron-binding protein IscA, proteobacteria ISU55_06235 IPR035903 HesB-like domain superfamily ISU55_06235 IPR017870 FeS cluster insertion, C-terminal, conserved site ISU55_06235 IPR016092 FeS cluster insertion protein ISU55_06235 IPR000361 FeS cluster biogenesis ISU55_06240 IPR036869 Chaperone J-domain superfamily ISU55_06240 IPR001623 DnaJ domain ISU55_06240 IPR004640 Co-chaperone Hsc20 ISU55_06240 IPR036386 HscB, C-terminal domain superfamily ISU55_06240 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain ISU55_06245 IPR042039 HscA chaperone, nucleotide-binding domain ISU55_06245 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily ISU55_06245 IPR010236 ISC system FeS cluster assembly, HscA chaperone ISU55_06245 IPR013126 Heat shock protein 70 family ISU55_06245 IPR018181 Heat shock protein 70, conserved site ISU55_06245 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily ISU55_06250 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria ISU55_06250 IPR001055 Adrenodoxin ISU55_06250 IPR018298 Adrenodoxin, iron-sulphur binding site ISU55_06250 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_06250 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_06250 IPR012675 Beta-grasp domain superfamily ISU55_06255 IPR036762 IscX-like superfamily ISU55_06255 IPR007479 ISC system FeS cluster assembly, IscX ISU55_06260 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal ISU55_06260 IPR008330 Peptidase M17, peptidase B ISU55_06260 IPR001346 Interferon regulatory factor DNA-binding domain ISU55_06260 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B ISU55_06265 IPR009839 SseB protein N-terminal domain ISU55_06265 IPR027945 SseB protein, C-terminal ISU55_06280 IPR003991 Pertactin virulence factor family ISU55_06280 IPR011050 Pectin lyase fold/virulence factor ISU55_06280 IPR012332 P22 tailspike-like, C-terminal domain superfamily ISU55_06280 IPR006315 Outer membrane autotransporter barrel ISU55_06280 IPR036709 Autotransporter beta-domain superfamily ISU55_06280 IPR005546 Autotransporter beta-domain ISU55_06280 IPR030930 Adhesin of bacterial autotransporter system ISU55_06280 IPR004899 Pertactin, central region ISU55_06285 IPR003991 Pertactin virulence factor family ISU55_06285 IPR006315 Outer membrane autotransporter barrel ISU55_06285 IPR036709 Autotransporter beta-domain superfamily ISU55_06285 IPR005546 Autotransporter beta-domain ISU55_06285 IPR030930 Adhesin of bacterial autotransporter system ISU55_06285 IPR011050 Pectin lyase fold/virulence factor ISU55_06285 IPR012332 P22 tailspike-like, C-terminal domain superfamily ISU55_06285 IPR004899 Pertactin, central region ISU55_06295 IPR036850 Nucleoside diphosphate kinase-like domain superfamily ISU55_06295 IPR001564 Nucleoside diphosphate kinase ISU55_06295 IPR034907 Nucleoside diphosphate kinase-like domain ISU55_06295 IPR023005 Nucleoside diphosphate kinase, active site ISU55_06300 IPR013785 Aldolase-type TIM barrel ISU55_06300 IPR040072 Methyltransferase (Class A) ISU55_06300 IPR007197 Radical SAM ISU55_06300 IPR027492 Dual-specificity RNA methyltransferase RlmN ISU55_06300 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr ISU55_06310 IPR001387 Cro/C1-type helix-turn-helix domain ISU55_06310 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_06310 IPR023690 Cytoskeleton protein RodZ ISU55_06310 IPR025194 Domain of unknown function DUF4115 ISU55_06315 IPR011005 Dihydropteroate synthase-like ISU55_06315 IPR036849 Enolase-like, C-terminal domain superfamily ISU55_06315 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial ISU55_06315 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type ISU55_06320 IPR033656 Histidyl-anticodon-binding ISU55_06320 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_06320 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit ISU55_06320 IPR004154 Anticodon-binding ISU55_06320 IPR036621 Anticodon-binding domain superfamily ISU55_06320 IPR015807 Histidine-tRNA ligase ISU55_06320 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain ISU55_06325 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_06325 IPR018704 Tetratricopeptide repeat-like domain ISU55_06325 IPR026039 Uncharacterised protein family UPF0070 ISU55_06330 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ISU55_06330 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ISU55_06330 IPR002372 Pyrrolo-quinoline quinone repeat ISU55_06330 IPR017687 Outer membrane protein assembly factor BamB ISU55_06330 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ISU55_06335 IPR032859 GTPase Der, C-terminal KH-domain-like ISU55_06335 IPR015946 K homology domain-like, alpha/beta ISU55_06335 IPR016484 GTP-binding protein EngA ISU55_06335 IPR005225 Small GTP-binding protein domain ISU55_06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06335 IPR006073 GTP binding domain ISU55_06335 IPR031166 EngA-type guanine nucleotide-binding (G) domain ISU55_06345 IPR010807 Protein of unknown function DUF1407 ISU55_06345 IPR029037 YfgJ-like ISU55_06350 IPR020579 Exonuclease VII, large subunit, C-terminal ISU55_06350 IPR025824 OB-fold nucleic acid binding domain ISU55_06350 IPR003753 Exonuclease VII, large subunit ISU55_06355 IPR001093 IMP dehydrogenase/GMP reductase ISU55_06355 IPR015875 IMP dehydrogenase / GMP reductase, conserved site ISU55_06355 IPR013785 Aldolase-type TIM barrel ISU55_06355 IPR000644 CBS domain ISU55_06355 IPR005990 Inosine-5'-monophosphate dehydrogenase ISU55_06360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_06360 IPR022310 NAD/GMP synthase ISU55_06360 IPR025777 GMP synthetase ATP pyrophosphatase domain ISU55_06360 IPR022955 GMP synthase ISU55_06360 IPR017926 Glutamine amidotransferase ISU55_06360 IPR001674 GMP synthase, C-terminal ISU55_06360 IPR029062 Class I glutamine amidotransferase-like ISU55_06360 IPR004739 GMP synthase, glutamine amidotransferase ISU55_06365 IPR036515 Transposase IS200-like superfamily ISU55_06365 IPR002686 Transposase IS200-like ISU55_06370 IPR036624 Hcp1-like superfamily ISU55_06370 IPR008514 Type VI secretion system effector, Hcp ISU55_06400 IPR001207 Transposase, mutator type ISU55_06415 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase ISU55_06415 IPR029056 Ribokinase-like ISU55_06415 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase ISU55_06430 IPR036501 Inhibitor of vertebrate lysozyme superfamily ISU55_06430 IPR014453 Inhibitor of vertebrate lysozyme ISU55_06435 IPR022433 Lipid kinase YegS ISU55_06435 IPR001206 Diacylglycerol kinase, catalytic domain ISU55_06435 IPR005218 Diacylglycerol/lipid kinase ISU55_06435 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ISU55_06435 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ISU55_06440 IPR032525 Peptidase family U32, C-terminal ISU55_06440 IPR001539 Peptidase U32 ISU55_06445 IPR010879 Domain of unknown function DUF1508 ISU55_06445 IPR036913 YegP-like superfamily ISU55_06450 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_06450 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_06450 IPR039420 Transcriptional regulatory protein WalR-like ISU55_06450 IPR001789 Signal transduction response regulator, receiver domain ISU55_06450 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_06450 IPR011006 CheY-like superfamily ISU55_06460 IPR036259 MFS transporter superfamily ISU55_06460 IPR023721 Multidrug resistance protein MdtD ISU55_06460 IPR011701 Major facilitator superfamily ISU55_06460 IPR020846 Major facilitator superfamily domain ISU55_06460 IPR004638 Drug resistance transporter EmrB-like ISU55_06465 IPR023931 Multidrug resistance protein MdtC ISU55_06465 IPR001036 Acriflavin resistance protein ISU55_06465 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ISU55_06470 IPR022831 Multidrug resistance protein MdtB ISU55_06470 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ISU55_06470 IPR001036 Acriflavin resistance protein ISU55_06475 IPR006143 RND efflux pump, membrane fusion protein ISU55_06475 IPR022824 Multidrug resistance protein MdtA ISU55_06475 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ISU55_06480 IPR017871 ABC transporter, conserved site ISU55_06480 IPR013611 Transport-associated OB, type 2 ISU55_06480 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit ISU55_06480 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06480 IPR003593 AAA+ ATPase domain ISU55_06480 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA ISU55_06480 IPR003439 ABC transporter-like ISU55_06480 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_06485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_06485 IPR000524 Transcription regulator HTH, GntR ISU55_06485 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_06485 IPR036390 Winged helix DNA-binding domain superfamily ISU55_06485 IPR004839 Aminotransferase, class I/classII ISU55_06485 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_06490 IPR005814 Aminotransferase class-III ISU55_06490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_06490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_06490 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_06490 IPR004632 4-aminobutyrate aminotransferase, bacterial ISU55_06500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_06500 IPR035906 MetI-like superfamily ISU55_06505 IPR035906 MetI-like superfamily ISU55_06505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_06510 IPR042054 YegD-like ISU55_06510 IPR013126 Heat shock protein 70 family ISU55_06510 IPR018181 Heat shock protein 70, conserved site ISU55_06515 IPR038076 MgtE, N-terminal domain superfamily ISU55_06515 IPR006667 SLC41 divalent cation transporters, integral membrane domain ISU55_06515 IPR000644 CBS domain ISU55_06515 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily ISU55_06515 IPR038048 Magnesium transporter MgtE, transmembrane domain ISU55_06515 IPR006669 Magnesium transporter MgtE ISU55_06515 IPR006668 Magnesium transporter, MgtE intracellular domain ISU55_06525 IPR022371 Exopolyphosphatase ISU55_06525 IPR003695 Ppx/GppA phosphatase ISU55_06525 IPR030673 Pyrophosphatase, GppA/Ppx-type ISU55_06530 IPR001736 Phospholipase D/Transphosphatidylase ISU55_06530 IPR025200 Polyphosphate kinase C-terminal domain 2 ISU55_06530 IPR025198 Polyphosphate kinase N-terminal domain ISU55_06530 IPR041108 Polyphosphate kinase, C-terminal domain 1 ISU55_06530 IPR024953 Polyphosphate kinase middle domain ISU55_06530 IPR036830 Polyphosphate kinase middle domain superfamily ISU55_06530 IPR036832 Polyphosphate kinase N-terminal domain superfamily ISU55_06530 IPR003414 Polyphosphate kinase ISU55_06535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_06535 IPR035906 MetI-like superfamily ISU55_06535 IPR011864 Phosphate ABC transporter, permease protein PstC ISU55_06540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_06540 IPR005672 Phosphate transport system permease protein PstA ISU55_06540 IPR035906 MetI-like superfamily ISU55_06545 IPR015850 ABC transporter, phosphate import, PstB ISU55_06545 IPR003593 AAA+ ATPase domain ISU55_06545 IPR003439 ABC transporter-like ISU55_06545 IPR005670 Phosphate transport system permease protein 1 ISU55_06545 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06545 IPR017871 ABC transporter, conserved site ISU55_06555 IPR000182 GNAT domain ISU55_06555 IPR016181 Acyl-CoA N-acyltransferase ISU55_06560 IPR001555 Phosphoribosylglycinamide formyltransferase, active site ISU55_06560 IPR036477 Formyl transferase, N-terminal domain superfamily ISU55_06560 IPR002376 Formyl transferase, N-terminal ISU55_06560 IPR004607 Phosphoribosylglycinamide formyltransferase ISU55_06565 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase ISU55_06565 IPR016188 PurM-like, N-terminal domain ISU55_06565 IPR010918 PurM-like, C-terminal domain ISU55_06565 IPR036676 PurM-like, C-terminal domain superfamily ISU55_06565 IPR036921 PurM-like, N-terminal domain superfamily ISU55_06570 IPR029057 Phosphoribosyltransferase-like ISU55_06570 IPR034332 Uracil phosphoribosyltransferase, bacterial-type ISU55_06570 IPR005765 Uracil phosphoribosyl transferase ISU55_06570 IPR000836 Phosphoribosyltransferase domain ISU55_06575 IPR036515 Transposase IS200-like superfamily ISU55_06575 IPR002686 Transposase IS200-like ISU55_06580 IPR017788 DnaA regulatory inactivator Hda ISU55_06580 IPR013317 Chromosomal replication initiator protein DnaA ISU55_06580 IPR020591 Chromosomal replication control, initiator DnaA-like ISU55_06580 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae ISU55_06580 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06585 IPR006659 Arsenate reductase ISU55_06585 IPR006660 Arsenate reductase-like ISU55_06585 IPR036249 Thioredoxin-like superfamily ISU55_06590 IPR001915 Peptidase M48 ISU55_06590 IPR030873 Beta-barrel assembly-enhancing protease ISU55_06590 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_06590 IPR011716 Tetratricopeptide TPR-3 ISU55_06595 IPR002549 Transmembrane protein TqsA-like ISU55_06605 IPR013766 Thioredoxin domain ISU55_06605 IPR024706 Peroxiredoxin, AhpC-type ISU55_06605 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ISU55_06605 IPR036249 Thioredoxin-like superfamily ISU55_06610 IPR016867 Glycine cleavage system transcriptional repressor ISU55_06610 IPR002912 ACT domain ISU55_06615 IPR020625 Schiff base-forming aldolase, active site ISU55_06615 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA ISU55_06615 IPR020624 Schiff base-forming aldolase, conserved site ISU55_06615 IPR013785 Aldolase-type TIM barrel ISU55_06615 IPR002220 DapA-like ISU55_06620 IPR014524 Outer membrane protein assembly factor BamC ISU55_06620 IPR042268 Outer membrane protein assembly factor BamC, C-terminal ISU55_06620 IPR010653 NlpB/DapX lipoprotein ISU55_06625 IPR036515 Transposase IS200-like superfamily ISU55_06625 IPR002686 Transposase IS200-like ISU55_06630 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase ISU55_06630 IPR018236 SAICAR synthetase, conserved site ISU55_06630 IPR028923 SAICAR synthetase/ADE2, N-terminal ISU55_06630 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase ISU55_06635 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative ISU55_06640 IPR007382 Uncharacterised protein family UPF0756, transmembrame ISU55_06645 IPR038321 TmcA, C-terminal domain superfamily ISU55_06645 IPR016181 Acyl-CoA N-acyltransferase ISU55_06645 IPR000182 GNAT domain ISU55_06645 IPR007807 Helicase domain ISU55_06645 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal ISU55_06645 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA ISU55_06645 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain ISU55_06645 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06645 IPR032672 TmcA/NAT10/Kre33 ISU55_06650 IPR020910 Uncharacterised protein family UPF0370 ISU55_06655 IPR003709 Peptidase M15B ISU55_06655 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ISU55_06660 IPR011650 Peptidase M20, dimerisation domain ISU55_06660 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ISU55_06660 IPR036264 Bacterial exopeptidase dimerisation domain ISU55_06660 IPR002933 Peptidase M20 ISU55_06660 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria ISU55_06665 IPR006504 Transcriptional regulator Spx/MgsR ISU55_06665 IPR006660 Arsenate reductase-like ISU55_06665 IPR036249 Thioredoxin-like superfamily ISU55_06680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_06680 IPR035906 MetI-like superfamily ISU55_06685 IPR013611 Transport-associated OB, type 2 ISU55_06685 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA ISU55_06685 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit ISU55_06685 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06685 IPR017871 ABC transporter, conserved site ISU55_06685 IPR003439 ABC transporter-like ISU55_06685 IPR003593 AAA+ ATPase domain ISU55_06695 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_06695 IPR024607 Sulfatase, conserved site ISU55_06695 IPR000917 Sulfatase, N-terminal ISU55_06700 IPR007197 Radical SAM ISU55_06700 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme ISU55_06700 IPR023885 4Fe4S-binding SPASM domain ISU55_06700 IPR013785 Aldolase-type TIM barrel ISU55_06705 IPR007404 LexA-binding, inner membrane-associated putative hydrolase ISU55_06715 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ISU55_06715 IPR001036 Acriflavin resistance protein ISU55_06715 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 ISU55_06725 IPR011006 CheY-like superfamily ISU55_06725 IPR001789 Signal transduction response regulator, receiver domain ISU55_06725 IPR000792 Transcription regulator LuxR, C-terminal ISU55_06725 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_06730 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_06730 IPR004496 Ferredoxin-type protein NapF ISU55_06730 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_06735 IPR005623 Chaperone NapD, nitrate reductase assembly ISU55_06745 IPR011031 Multihaem cytochrome ISU55_06745 IPR036280 Multiheme cytochrome superfamily ISU55_06745 IPR005591 Nitrate reductase cytochrome c-type subunit NapB ISU55_06750 IPR024717 Denitrification system component NapC/NirT/NrfH ISU55_06750 IPR005126 NapC/NirT cytochrome c, N-terminal ISU55_06750 IPR011031 Multihaem cytochrome ISU55_06750 IPR038266 NapC/NirT cytochrome c superfamily ISU55_06750 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT ISU55_06750 IPR036280 Multiheme cytochrome superfamily ISU55_06755 IPR004385 Nucleoside diphosphate pyrophosphatase ISU55_06755 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_06755 IPR000086 NUDIX hydrolase domain ISU55_06765 IPR001270 ClpA/B family ISU55_06765 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_06765 IPR002611 IstB-like ATP-binding protein ISU55_06765 IPR003593 AAA+ ATPase domain ISU55_06765 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06770 IPR017894 HTH domain, IS21 transposase-type ISU55_06770 IPR012337 Ribonuclease H-like superfamily ISU55_06770 IPR006120 Resolvase, HTH domain ISU55_06770 IPR001584 Integrase, catalytic core ISU55_06770 IPR036397 Ribonuclease H superfamily ISU55_06780 IPR003791 Protein of unknown function UPF0178 ISU55_06785 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily ISU55_06785 IPR001260 Coproporphyrinogen III oxidase, aerobic ISU55_06785 IPR018375 Coproporphyrinogen III oxidase, conserved site ISU55_06790 IPR000182 GNAT domain ISU55_06790 IPR016181 Acyl-CoA N-acyltransferase ISU55_06790 IPR023072 Acetyltransferase, YpeA ISU55_06800 IPR036709 Autotransporter beta-domain superfamily ISU55_06800 IPR005546 Autotransporter beta-domain ISU55_06800 IPR024973 ESPR domain ISU55_06800 IPR006315 Outer membrane autotransporter barrel ISU55_06800 IPR012332 P22 tailspike-like, C-terminal domain superfamily ISU55_06800 IPR003991 Pertactin virulence factor family ISU55_06800 IPR030930 Adhesin of bacterial autotransporter system ISU55_06800 IPR011050 Pectin lyase fold/virulence factor ISU55_06800 IPR004899 Pertactin, central region ISU55_06805 IPR036700 Bacterial OB-fold superfamily ISU55_06805 IPR005220 Bacterial OB-fold ISU55_06805 IPR016052 Bacteriophage 933W, L0136 ISU55_06810 IPR010938 Protein of unknown function DUF1131 ISU55_06810 IPR038714 YfeY-like superfamily ISU55_06815 IPR006314 Dyp-type peroxidase ISU55_06815 IPR011008 Dimeric alpha-beta barrel ISU55_06820 IPR013785 Aldolase-type TIM barrel ISU55_06820 IPR002220 DapA-like ISU55_06820 IPR005264 N-acetylneuraminate lyase ISU55_06820 IPR020625 Schiff base-forming aldolase, active site ISU55_06825 IPR013785 Aldolase-type TIM barrel ISU55_06825 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase ISU55_06825 IPR011060 Ribulose-phosphate binding barrel ISU55_06830 IPR032675 Leucine-rich repeat domain superfamily ISU55_06830 IPR032674 LRR-containing bacterial E3 ligase, N-terminal ISU55_06830 IPR001611 Leucine-rich repeat ISU55_06835 IPR000600 ROK family ISU55_06835 IPR023945 N-acetylmannosamine kinase, bacterial ISU55_06840 IPR004375 YhcH/YjgK/YiaL family ISU55_06840 IPR037012 YhcH/YjgK/YiaL superfamily ISU55_06845 IPR009057 Homeobox-like domain superfamily ISU55_06845 IPR000281 Helix-turn-helix protein RpiR ISU55_06845 IPR035472 RpiR-like, SIS domain ISU55_06845 IPR001347 Sugar isomerase (SIS) ISU55_06845 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_06850 IPR036259 MFS transporter superfamily ISU55_06850 IPR011701 Major facilitator superfamily ISU55_06850 IPR004742 Sialic acid transporter ISU55_06850 IPR020846 Major facilitator superfamily domain ISU55_06855 IPR000957 Sulphate/thiosulphate-binding, conserved site ISU55_06855 IPR005669 Thiosulphate/Sulfate-binding protein ISU55_06855 IPR034408 Sulphate/thiosulphate-binding site ISU55_06860 IPR011865 Sulphate ABC transporter, permease protein CysT ISU55_06860 IPR005667 Sulphate ABC transporter permease protein 2 ISU55_06860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_06860 IPR035906 MetI-like superfamily ISU55_06865 IPR011866 Sulphate ABC transporter, permease protein CysW ISU55_06865 IPR035906 MetI-like superfamily ISU55_06865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_06865 IPR005667 Sulphate ABC transporter permease protein 2 ISU55_06870 IPR003593 AAA+ ATPase domain ISU55_06870 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal ISU55_06870 IPR003439 ABC transporter-like ISU55_06870 IPR017871 ABC transporter, conserved site ISU55_06870 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_06870 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06870 IPR005666 Sulphate transport system permease protein 1 ISU55_06875 IPR005856 Cysteine synthase ISU55_06875 IPR005858 Cysteine synthase CysM ISU55_06875 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_06875 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_06875 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ISU55_06885 IPR001789 Signal transduction response regulator, receiver domain ISU55_06885 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_06885 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_06885 IPR039420 Transcriptional regulatory protein WalR-like ISU55_06885 IPR011006 CheY-like superfamily ISU55_06885 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_06890 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_06890 IPR005467 Histidine kinase domain ISU55_06890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_06890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_06890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_06890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_06890 IPR003660 HAMP domain ISU55_06900 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_06900 IPR027619 Putative C-S lyase ISU55_06900 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_06900 IPR004839 Aminotransferase, class I/classII ISU55_06900 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_06910 IPR000994 Peptidase M24 ISU55_06910 IPR001714 Peptidase M24, methionine aminopeptidase ISU55_06910 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 ISU55_06910 IPR036005 Creatinase/aminopeptidase-like ISU55_06920 IPR038377 Sodium/glucose symporter superfamily ISU55_06920 IPR001734 Sodium/solute symporter ISU55_06925 IPR023753 FAD/NAD(P)-binding domain ISU55_06925 IPR023536 Coenzyme A disulphide reductase, staphyolococci ISU55_06925 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU55_06925 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ISU55_06925 IPR017758 Coenzyme A disulphide reductase ISU55_06925 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_06930 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06930 IPR003593 AAA+ ATPase domain ISU55_06930 IPR003838 ABC transporter permease protein domain ISU55_06930 IPR003439 ABC transporter-like ISU55_06930 IPR017871 ABC transporter, conserved site ISU55_06930 IPR017911 ABC transporter, macrolide export, ATP-binding domain ISU55_06930 IPR025857 MacB-like periplasmic core domain ISU55_06935 IPR006143 RND efflux pump, membrane fusion protein ISU55_06935 IPR030190 Macrolide export protein MacA ISU55_06935 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_06940 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_06940 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_06940 IPR039420 Transcriptional regulatory protein WalR-like ISU55_06940 IPR011006 CheY-like superfamily ISU55_06940 IPR001789 Signal transduction response regulator, receiver domain ISU55_06945 IPR005467 Histidine kinase domain ISU55_06945 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_06945 IPR003660 HAMP domain ISU55_06945 IPR038515 CpxA, periplasmic domain superfamily ISU55_06945 IPR032404 Two-component sensor protein CpxA, periplasmic domain ISU55_06945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_06945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_06945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_06945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_06950 IPR036397 Ribonuclease H superfamily ISU55_06950 IPR017894 HTH domain, IS21 transposase-type ISU55_06950 IPR001584 Integrase, catalytic core ISU55_06950 IPR006120 Resolvase, HTH domain ISU55_06950 IPR012337 Ribonuclease H-like superfamily ISU55_06955 IPR001270 ClpA/B family ISU55_06955 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_06955 IPR002611 IstB-like ATP-binding protein ISU55_06955 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_06955 IPR003593 AAA+ ATPase domain ISU55_06960 IPR002686 Transposase IS200-like ISU55_06960 IPR036515 Transposase IS200-like superfamily ISU55_06965 IPR011055 Duplicated hybrid motif ISU55_06965 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ISU55_06970 IPR006318 Phosphotransferase system, enzyme I-like ISU55_06970 IPR000121 PEP-utilising enzyme, C-terminal ISU55_06970 IPR024692 Phosphotransferase system, enzyme I ISU55_06970 IPR040442 Pyruvate kinase-like domain superfamily ISU55_06970 IPR008279 PEP-utilising enzyme, mobile domain ISU55_06970 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_06970 IPR018274 PEP-utilising enzyme, active site ISU55_06970 IPR023151 PEP-utilising enzyme, conserved site ISU55_06970 IPR036637 Phosphohistidine domain superfamily ISU55_06970 IPR008731 Phosphotransferase system, enzyme I N-terminal ISU55_06970 IPR036618 PtsI, HPr-binding domain superfamily ISU55_06975 IPR000032 Phosphocarrier protein HPr-like ISU55_06975 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ISU55_06975 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ISU55_06975 IPR035895 HPr-like superfamily ISU55_06980 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_06980 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_06980 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ISU55_06980 IPR005859 Cysteine synthase CysK ISU55_06980 IPR005856 Cysteine synthase ISU55_06985 IPR022985 Sulfate transporter CysZ ISU55_06990 IPR011919 Cell division protein ZipA ISU55_06990 IPR007449 ZipA, C-terminal FtsZ-binding domain ISU55_06990 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily ISU55_06995 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type ISU55_06995 IPR004150 NAD-dependent DNA ligase, OB-fold ISU55_06995 IPR013839 NAD-dependent DNA ligase, adenylation ISU55_06995 IPR013840 NAD-dependent DNA ligase, N-terminal ISU55_06995 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ISU55_06995 IPR010994 RuvA domain 2-like ISU55_06995 IPR012340 Nucleic acid-binding, OB-fold ISU55_06995 IPR036420 BRCT domain superfamily ISU55_06995 IPR041663 DisA/LigA, helix-hairpin-helix motif ISU55_06995 IPR001357 BRCT domain ISU55_06995 IPR001679 NAD-dependent DNA ligase ISU55_06995 IPR033136 NAD-dependent DNA ligase, conserved site ISU55_06995 IPR018239 NAD-dependent DNA ligase, active site ISU55_07000 IPR024530 Putative quorum-sensing-regulated virulence factor ISU55_07020 IPR036515 Transposase IS200-like superfamily ISU55_07020 IPR002686 Transposase IS200-like ISU55_07025 IPR033910 Glutamyl-tRNA synthetase ISU55_07025 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain ISU55_07025 IPR000924 Glutamyl/glutaminyl-tRNA synthetase ISU55_07025 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_07025 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 ISU55_07025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_07025 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial ISU55_07025 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding ISU55_07060 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial ISU55_07060 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ISU55_07060 IPR002668 Concentrative nucleoside transporter N-terminal domain ISU55_07060 IPR008276 Concentrative nucleoside transporter ISU55_07060 IPR011657 Concentrative nucleoside transporter C-terminal domain ISU55_07065 IPR001046 NRAMP family ISU55_07075 IPR036812 NADP-dependent oxidoreductase domain superfamily ISU55_07075 IPR023210 NADP-dependent oxidoreductase domain ISU55_07080 IPR036390 Winged helix DNA-binding domain superfamily ISU55_07080 IPR005119 LysR, substrate-binding ISU55_07080 IPR000847 Transcription regulator HTH, LysR ISU55_07080 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_07090 IPR003836 Glucokinase ISU55_07095 IPR010856 Protein of unknown function DUF1479 ISU55_07095 IPR027443 Isopenicillin N synthase-like ISU55_07100 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_07100 IPR004839 Aminotransferase, class I/classII ISU55_07100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_07100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_07105 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase ISU55_07105 IPR016174 Di-haem cytochrome, transmembrane ISU55_07115 IPR005534 Curli production assembly/transport component CsgG ISU55_07125 IPR008517 Protein of unknown function DUF799 ISU55_07135 IPR028611 Tat proofreading chaperone DmsD ISU55_07135 IPR036411 TorD-like superfamily ISU55_07135 IPR026269 Tat proofreading chaperone DmsD-type ISU55_07135 IPR020945 DMSO/Nitrate reductase chaperone ISU55_07140 IPR007059 DMSO reductase anchor subunit (DmsC) ISU55_07145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_07145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_07145 IPR014297 Dimethylsulphoxide reductase, chain B ISU55_07150 IPR006657 Molybdopterin dinucleotide-binding domain ISU55_07150 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site ISU55_07150 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE ISU55_07150 IPR009010 Aspartate decarboxylase-like domain superfamily ISU55_07150 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_07150 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ISU55_07150 IPR006656 Molybdopterin oxidoreductase ISU55_07160 IPR036624 Hcp1-like superfamily ISU55_07160 IPR008514 Type VI secretion system effector, Hcp ISU55_07170 IPR030287 Fe(3+) ions import ATP-binding protein FbpC ISU55_07170 IPR003593 AAA+ ATPase domain ISU55_07170 IPR003439 ABC transporter-like ISU55_07170 IPR017871 ABC transporter, conserved site ISU55_07170 IPR015853 ABC transporter, ferric cation import, FbpC ISU55_07170 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_07170 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_07175 IPR035906 MetI-like superfamily ISU55_07180 IPR026045 Ferric binding protein ISU55_07180 IPR006061 Solute-binding family 1, conserved site ISU55_07230 IPR010272 Type VI secretion system, TssF-like ISU55_07235 IPR018368 ClpA/B, conserved site 1 ISU55_07235 IPR019489 Clp ATPase, C-terminal ISU55_07235 IPR004176 Clp, N-terminal ISU55_07235 IPR036628 Clp, N-terminal domain superfamily ISU55_07235 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07235 IPR041546 ClpA/ClpB, AAA lid domain ISU55_07235 IPR028299 ClpA/B, conserved site 2 ISU55_07235 IPR003593 AAA+ ATPase domain ISU55_07235 IPR003959 ATPase, AAA-type, core ISU55_07235 IPR001270 ClpA/B family ISU55_07235 IPR017729 Type VI secretion system, ATPase ClpV1 ISU55_07240 IPR036937 Fimbrial-type adhesion domain superfamily ISU55_07240 IPR008966 Adhesion domain superfamily ISU55_07240 IPR039458 FimA-like ISU55_07245 IPR008962 PapD-like superfamily ISU55_07245 IPR016147 Pili assembly chaperone, N-terminal ISU55_07245 IPR018046 Pili assembly chaperone, conserved site ISU55_07245 IPR016148 Pili assembly chaperone, C-terminal ISU55_07245 IPR013783 Immunoglobulin-like fold ISU55_07245 IPR001829 Pili assembly chaperone, bacterial ISU55_07245 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_07250 IPR025885 PapC, N-terminal domain ISU55_07250 IPR025949 PapC-like, C-terminal domain ISU55_07250 IPR042186 Outer membrane usher protein FimD, plug domain ISU55_07250 IPR018030 Fimbrial membrane usher, conserved site ISU55_07250 IPR000015 Outer membrane usher protein ISU55_07250 IPR037224 PapC, N-terminal domain superfamily ISU55_07255 IPR001207 Transposase, mutator type ISU55_07260 IPR025949 PapC-like, C-terminal domain ISU55_07260 IPR037224 PapC, N-terminal domain superfamily ISU55_07260 IPR042186 Outer membrane usher protein FimD, plug domain ISU55_07260 IPR018030 Fimbrial membrane usher, conserved site ISU55_07260 IPR000015 Outer membrane usher protein ISU55_07260 IPR025885 PapC, N-terminal domain ISU55_07270 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU55_07275 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU55_07290 IPR010263 Type VI secretion protein, VC_A0114 ISU55_07300 IPR036397 Ribonuclease H superfamily ISU55_07300 IPR001584 Integrase, catalytic core ISU55_07300 IPR017894 HTH domain, IS21 transposase-type ISU55_07300 IPR006120 Resolvase, HTH domain ISU55_07300 IPR012337 Ribonuclease H-like superfamily ISU55_07305 IPR002611 IstB-like ATP-binding protein ISU55_07305 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_07305 IPR001270 ClpA/B family ISU55_07305 IPR003593 AAA+ ATPase domain ISU55_07305 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07315 IPR010623 Type VI secretion system IcmF, C-terminal ISU55_07315 IPR025743 IcmF-related, N-terminal domain ISU55_07315 IPR009612 IcmF-related ISU55_07315 IPR017731 Type VI secretion system, IcmF ISU55_07320 IPR006531 Gp5 N-terminal ISU55_07320 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ISU55_07320 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ISU55_07320 IPR037026 Vgr protein, OB-fold domain superfamily ISU55_07320 IPR010609 Gp5, C-terminal ISU55_07335 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_07335 IPR009211 Predicted virulence protein, SciE type ISU55_07350 IPR004624 PhnA protein ISU55_07350 IPR013988 PhnA protein, C-terminal ISU55_07350 IPR013987 PhnA protein, N-terminal ISU55_07360 IPR023353 LemA-like domain superfamily ISU55_07360 IPR007156 LemA ISU55_07375 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07375 IPR003593 AAA+ ATPase domain ISU55_07375 IPR005895 ABC transporter, haem export, CcmA ISU55_07375 IPR017871 ABC transporter, conserved site ISU55_07375 IPR003439 ABC transporter-like ISU55_07380 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria ISU55_07380 IPR003544 Cytochrome c-type biogenesis protein CcmB ISU55_07385 IPR002541 Cytochrome c assembly protein ISU55_07385 IPR003557 Cytochrome c-type biogenesis protein CcmC ISU55_07390 IPR007078 Haem exporter protein D (CcmD) ISU55_07395 IPR004329 CcmE/CycJ protein ISU55_07395 IPR036127 CcmE-like superfamily ISU55_07400 IPR003568 Cytochrome c-type biogenesis protein CcmF ISU55_07400 IPR003567 Cytochrome c-type biogenesis protein ISU55_07400 IPR002541 Cytochrome c assembly protein ISU55_07400 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal ISU55_07405 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE ISU55_07405 IPR013740 Redoxin ISU55_07405 IPR036249 Thioredoxin-like superfamily ISU55_07405 IPR017937 Thioredoxin, conserved site ISU55_07405 IPR013766 Thioredoxin domain ISU55_07410 IPR019734 Tetratricopeptide repeat ISU55_07410 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily ISU55_07410 IPR013026 Tetratricopeptide repeat-containing domain ISU55_07410 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_07410 IPR005616 CcmH/CycL/Ccl2/NrfF family ISU55_07415 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily ISU55_07415 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_07415 IPR019734 Tetratricopeptide repeat ISU55_07415 IPR013026 Tetratricopeptide repeat-containing domain ISU55_07415 IPR005616 CcmH/CycL/Ccl2/NrfF family ISU55_07420 IPR007428 MlaA lipoprotein ISU55_07425 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU55_07425 IPR042117 OMPP1/FadL/TodX superfamily ISU55_07430 IPR035571 UPF0234-like, C-terminal ISU55_07430 IPR005272 Conserved hypothetical protein CHP00743 ISU55_07435 IPR020610 Thiolase, active site ISU55_07435 IPR020616 Thiolase, N-terminal ISU55_07435 IPR020613 Thiolase, conserved site ISU55_07435 IPR020617 Thiolase, C-terminal ISU55_07435 IPR020615 Thiolase, acyl-enzyme intermediate active site ISU55_07435 IPR016039 Thiolase-like ISU55_07435 IPR002155 Thiolase ISU55_07435 IPR012806 Acetyl-CoA C-acyltransferase FadI ISU55_07440 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ISU55_07440 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ISU55_07440 IPR001753 Enoyl-CoA hydratase/isomerase ISU55_07440 IPR036291 NAD(P)-binding domain superfamily ISU55_07440 IPR029045 ClpP/crotonase-like domain superfamily ISU55_07440 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ISU55_07440 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_07440 IPR012802 Fatty oxidation complex, alpha subunit FadJ ISU55_07445 IPR004449 Phosphohistidine phosphatase SixA ISU55_07445 IPR029033 Histidine phosphatase superfamily ISU55_07445 IPR013078 Histidine phosphatase superfamily, clade-1 ISU55_07455 IPR036063 Smr domain superfamily ISU55_07455 IPR002625 Smr domain ISU55_07455 IPR022990 Uncharacterised protein family UPF0115 ISU55_07460 IPR004556 Methyltransferase HemK-like ISU55_07460 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase ISU55_07460 IPR007848 Methyltransferase small domain ISU55_07460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_07460 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_07465 IPR000453 Chorismate synthase ISU55_07465 IPR035904 Chorismate synthase AroC superfamily ISU55_07465 IPR020541 Chorismate synthase, conserved site ISU55_07470 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ISU55_07470 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase ISU55_07475 IPR002781 Transmembrane protein TauE-like ISU55_07480 IPR007411 Elongation factor P hydroxylase ISU55_07485 IPR014987 Uncharacterised protein family YfcL ISU55_07490 IPR008471 MnmC-like methyltransferase ISU55_07490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_07490 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal ISU55_07490 IPR006076 FAD dependent oxidoreductase ISU55_07490 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC ISU55_07490 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_07495 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ISU55_07495 IPR016039 Thiolase-like ISU55_07495 IPR000794 Beta-ketoacyl synthase ISU55_07495 IPR018201 Beta-ketoacyl synthase, active site ISU55_07495 IPR014031 Beta-ketoacyl synthase, C-terminal ISU55_07495 IPR014030 Beta-ketoacyl synthase, N-terminal ISU55_07500 IPR033134 Asp/Glu racemase, active site 2 ISU55_07500 IPR015942 Asp/Glu/hydantoin racemase ISU55_07500 IPR001920 Asp/Glu racemase ISU55_07500 IPR018187 Asp/Glu racemase, active site 1 ISU55_07500 IPR004380 Aspartate racemase ISU55_07505 IPR000259 Fimbrial-type adhesion domain ISU55_07505 IPR036937 Fimbrial-type adhesion domain superfamily ISU55_07505 IPR008966 Adhesion domain superfamily ISU55_07510 IPR023597 Flagellar regulator Flk ISU55_07515 IPR000620 EamA domain ISU55_07525 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ISU55_07525 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ISU55_07525 IPR020921 Erythronate-4-phosphate dehydrogenase ISU55_07525 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain ISU55_07525 IPR036291 NAD(P)-binding domain superfamily ISU55_07525 IPR038251 PdxB, dimerisation domain superfamily ISU55_07525 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU55_07525 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ISU55_07530 IPR000534 Semialdehyde dehydrogenase, NAD-binding ISU55_07530 IPR036291 NAD(P)-binding domain superfamily ISU55_07530 IPR012280 Semialdehyde dehydrogenase, dimerisation domain ISU55_07535 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_07535 IPR001406 Pseudouridine synthase I, TruA ISU55_07535 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain ISU55_07535 IPR020095 Pseudouridine synthase I, TruA, C-terminal ISU55_07540 IPR032818 DedA family ISU55_07540 IPR032816 SNARE associated Golgi protein ISU55_07545 IPR041010 Acetyl-coA carboxylase zinc finger domain ISU55_07545 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal ISU55_07545 IPR029045 ClpP/crotonase-like domain superfamily ISU55_07545 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit ISU55_07545 IPR034733 Acetyl-CoA carboxylase ISU55_07550 IPR004101 Mur ligase, C-terminal ISU55_07550 IPR013221 Mur ligase, central ISU55_07550 IPR036615 Mur ligase, C-terminal domain superfamily ISU55_07550 IPR018109 Folylpolyglutamate synthetase, conserved site ISU55_07550 IPR001645 Folylpolyglutamate synthetase ISU55_07550 IPR036565 Mur-like, catalytic domain superfamily ISU55_07555 IPR032898 Cell division protein DedD ISU55_07555 IPR007730 Sporulation-like domain ISU55_07555 IPR036680 Sporulation-like domain superfamily ISU55_07560 IPR003825 Colicin V production, CvpA ISU55_07565 IPR035584 Amidophosphoribosyltransferase, N-terminal ISU55_07565 IPR005854 Amidophosphoribosyltransferase ISU55_07565 IPR029057 Phosphoribosyltransferase-like ISU55_07565 IPR000836 Phosphoribosyltransferase domain ISU55_07565 IPR029055 Nucleophile aminohydrolases, N-terminal ISU55_07565 IPR017932 Glutamine amidotransferase type 2 domain ISU55_07570 IPR004507 Flavin prenyltransferase UbiX-like ISU55_07570 IPR036551 Flavin prenyltransferase-like ISU55_07570 IPR003382 Flavoprotein ISU55_07575 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_07575 IPR018313 Solute-binding protein family 3, conserved site ISU55_07575 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter ISU55_07580 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_07580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_07580 IPR035906 MetI-like superfamily ISU55_07580 IPR030199 Histidine transport system permease protein HisQ ISU55_07585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_07585 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_07585 IPR035906 MetI-like superfamily ISU55_07590 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07590 IPR017871 ABC transporter, conserved site ISU55_07590 IPR003439 ABC transporter-like ISU55_07590 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ISU55_07590 IPR003593 AAA+ ATPase domain ISU55_07595 IPR013549 Domain of unknown function DUF1731 ISU55_07595 IPR001509 NAD-dependent epimerase/dehydratase ISU55_07595 IPR010099 Epimerase family protein SDR39U1 ISU55_07595 IPR036291 NAD(P)-binding domain superfamily ISU55_07605 IPR020935 Phosphodiesterase YfcE, conserved site ISU55_07605 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type ISU55_07605 IPR029052 Metallo-dependent phosphatase-like ISU55_07605 IPR041802 YfcE-like, metallophosphatase domain ISU55_07605 IPR000979 Phosphodiesterase MJ0936/Vps29 ISU55_07610 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_07610 IPR000086 NUDIX hydrolase domain ISU55_07610 IPR024195 NUDIX hydrolase, YfcD, predicted ISU55_07615 IPR004703 Phosphotransferase system, sugar-specific permease component ISU55_07620 IPR001207 Transposase, mutator type ISU55_07630 IPR002178 PTS EIIA type-2 domain ISU55_07630 IPR016152 Phosphotransferase/anion transporter ISU55_07635 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_07635 IPR001761 Periplasmic binding protein/LacI sugar binding domain ISU55_07635 IPR000843 LacI-type HTH domain ISU55_07635 IPR028082 Periplasmic binding protein-like I ISU55_07640 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ISU55_07640 IPR016475 Phosphate acetyltransferase, bacteria ISU55_07640 IPR010766 DRTGG ISU55_07640 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07640 IPR004614 Phosphate acetyltransferase ISU55_07640 IPR042113 Phosphate acetyltransferase, domain 1 ISU55_07640 IPR042112 Phosphate acetyltransferase, domain 2 ISU55_07640 IPR002505 Phosphate acetyl/butaryl transferase ISU55_07645 IPR023865 Aliphatic acid kinase, short-chain, conserved site ISU55_07645 IPR000890 Aliphatic acid kinase, short-chain ISU55_07645 IPR004372 Acetate/propionate kinase ISU55_07650 IPR007334 Uncharacterised protein family UPF0208 ISU55_07655 IPR023145 YfbU, helix-hairpin domain superfamily ISU55_07655 IPR023146 YfbU, alpha-helical bundle domain superfamily ISU55_07655 IPR005587 Uncharacterised protein family UPF0304, YfbU ISU55_07660 IPR023214 HAD superfamily ISU55_07660 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_07660 IPR006439 HAD hydrolase, subfamily IA ISU55_07660 IPR036412 HAD-like superfamily ISU55_07660 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ISU55_07665 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ISU55_07665 IPR006037 Regulator of K+ conductance, C-terminal ISU55_07665 IPR031312 Sodium/sulphate symporter, conserved site ISU55_07665 IPR004680 Citrate transporter-like domain ISU55_07670 IPR003607 HD/PDEase domain ISU55_07670 IPR022971 5'-deoxynucleotidase YfbR ISU55_07670 IPR039356 Metal-dependent nucleoside 5'-monophosphatase ISU55_07675 IPR004839 Aminotransferase, class I/classII ISU55_07675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_07675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_07675 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_07680 IPR005119 LysR, substrate-binding ISU55_07680 IPR000847 Transcription regulator HTH, LysR ISU55_07680 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_07680 IPR036390 Winged helix DNA-binding domain superfamily ISU55_07685 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid ISU55_07685 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily ISU55_07685 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 ISU55_07690 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit ISU55_07690 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit ISU55_07695 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily ISU55_07695 IPR001135 NADH-quinone oxidoreductase, subunit D ISU55_07695 IPR010218 NADH dehydrogenase, subunit C ISU55_07695 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit ISU55_07695 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site ISU55_07695 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H ISU55_07695 IPR029014 [NiFe]-hydrogenase, large subunit ISU55_07695 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily ISU55_07695 IPR023062 NADH dehydrogenase, subunit CD ISU55_07700 IPR042128 NuoE domain ISU55_07700 IPR002023 NADH-quinone oxidoreductase subunit E-like ISU55_07700 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal ISU55_07700 IPR036249 Thioredoxin-like superfamily ISU55_07705 IPR019554 Soluble ligand binding domain ISU55_07705 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily ISU55_07705 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site ISU55_07705 IPR011537 NADH ubiquinone oxidoreductase, F subunit ISU55_07705 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain ISU55_07705 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily ISU55_07705 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain ISU55_07710 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding ISU55_07710 IPR010228 NADH:ubiquinone oxidoreductase, subunit G ISU55_07710 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site ISU55_07710 IPR006656 Molybdopterin oxidoreductase ISU55_07710 IPR006657 Molybdopterin dinucleotide-binding domain ISU55_07710 IPR009010 Aspartate decarboxylase-like domain superfamily ISU55_07710 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_07710 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_07710 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ISU55_07715 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site ISU55_07715 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H ISU55_07720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_07720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_07720 IPR010226 NADH-quinone oxidoreductase, chain I ISU55_07725 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ ISU55_07725 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 ISU55_07730 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ISU55_07730 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K ISU55_07735 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 ISU55_07735 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup ISU55_07735 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ISU55_07735 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal ISU55_07740 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ISU55_07740 IPR003918 NADH:ubiquinone oxidoreductase ISU55_07740 IPR010227 NADH-quinone oxidoreductase, chain M/4 ISU55_07745 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ISU55_07745 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 ISU55_07760 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_07760 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_07760 IPR036291 NAD(P)-binding domain superfamily ISU55_07765 IPR031322 Shikimate kinase/gluconokinase ISU55_07765 IPR006001 Carbohydrate kinase, thermoresistant glucokinase ISU55_07765 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07780 IPR017853 Glycoside hydrolase superfamily ISU55_07780 IPR003790 Glycosyl hydrolase-like 10 ISU55_07780 IPR013785 Aldolase-type TIM barrel ISU55_07785 IPR028082 Periplasmic binding protein-like I ISU55_07785 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_07785 IPR000843 LacI-type HTH domain ISU55_07790 IPR036291 NAD(P)-binding domain superfamily ISU55_07790 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU55_07790 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ISU55_07795 IPR020846 Major facilitator superfamily domain ISU55_07795 IPR036259 MFS transporter superfamily ISU55_07795 IPR011701 Major facilitator superfamily ISU55_07800 IPR038084 GlcG-like domain superfamily ISU55_07800 IPR010371 Uncharacterised protein family UPF0303 ISU55_07800 IPR005624 Haem-degrading ISU55_07805 IPR042096 Dihydroxy-acid dehydratase, C-terminal ISU55_07805 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase ISU55_07805 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site ISU55_07805 IPR037237 IlvD/EDD, N-terminal domain ISU55_07805 IPR004786 6-phosphogluconate dehydratase ISU55_07810 IPR010279 Inner membrane protein YqjD/ElaB ISU55_07820 IPR015890 Chorismate-utilising enzyme, C-terminal ISU55_07820 IPR005801 ADC synthase ISU55_07820 IPR004561 Isochorismate synthase ISU55_07820 IPR034681 Isochorismate synthase MenF ISU55_07825 IPR032264 Menaquinone biosynthesis protein MenD, middle domain ISU55_07825 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ISU55_07825 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ISU55_07825 IPR029061 Thiamin diphosphate-binding fold ISU55_07825 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase ISU55_07830 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase ISU55_07830 IPR000073 Alpha/beta hydrolase fold-1 ISU55_07830 IPR029058 Alpha/Beta hydrolase fold ISU55_07835 IPR014748 Enoyl-CoA hydratase, C-terminal ISU55_07835 IPR029045 ClpP/crotonase-like domain superfamily ISU55_07835 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ISU55_07835 IPR001753 Enoyl-CoA hydratase/isomerase ISU55_07835 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB ISU55_07840 IPR036849 Enolase-like, C-terminal domain superfamily ISU55_07840 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ISU55_07840 IPR029017 Enolase-like, N-terminal ISU55_07840 IPR010196 o-Succinylbenzoate synthase, MenC type1 ISU55_07840 IPR029065 Enolase C-terminal domain-like ISU55_07845 IPR000873 AMP-dependent synthetase/ligase ISU55_07845 IPR010192 2-succinylbenzoate--CoA ligase ISU55_07845 IPR020845 AMP-binding, conserved site ISU55_07845 IPR025110 AMP-binding enzyme, C-terminal domain ISU55_07845 IPR042099 AMP-dependent synthetase-like superfamily ISU55_07850 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily ISU55_07850 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily ISU55_07850 IPR017459 Glycosyl transferase family 3, N-terminal domain ISU55_07855 IPR036275 YdgH-like superfamily ISU55_07855 IPR010854 Domain of unknown function DUF1471 ISU55_07855 IPR025543 Dodecin-like ISU55_07860 IPR016909 Ribosomal RNA large subunit methyltransferase F ISU55_07860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_07860 IPR010286 METTL16/RlmF family ISU55_07870 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07870 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_07870 IPR001270 ClpA/B family ISU55_07870 IPR003593 AAA+ ATPase domain ISU55_07870 IPR002611 IstB-like ATP-binding protein ISU55_07875 IPR012337 Ribonuclease H-like superfamily ISU55_07875 IPR006120 Resolvase, HTH domain ISU55_07875 IPR036397 Ribonuclease H superfamily ISU55_07875 IPR017894 HTH domain, IS21 transposase-type ISU55_07875 IPR001584 Integrase, catalytic core ISU55_07880 IPR000700 PAS-associated, C-terminal ISU55_07880 IPR013655 PAS fold-3 ISU55_07880 IPR004090 Chemotaxis methyl-accepting receptor ISU55_07880 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU55_07880 IPR000014 PAS domain ISU55_07880 IPR035965 PAS domain superfamily ISU55_07880 IPR001610 PAC motif ISU55_07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07885 IPR017871 ABC transporter, conserved site ISU55_07885 IPR003439 ABC transporter-like ISU55_07885 IPR003593 AAA+ ATPase domain ISU55_07885 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ISU55_07890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_07890 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_07890 IPR035906 MetI-like superfamily ISU55_07895 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_07895 IPR018313 Solute-binding protein family 3, conserved site ISU55_07895 IPR001320 Ionotropic glutamate receptor ISU55_07905 IPR023188 DNA-binding protein Dps, conserved site ISU55_07905 IPR009078 Ferritin-like superfamily ISU55_07905 IPR002177 DNA-binding protein Dps ISU55_07905 IPR012347 Ferritin-like ISU55_07905 IPR008331 Ferritin/DPS protein domain ISU55_07905 IPR023067 DNA protection during starvation protein, gammaproteobacteria ISU55_07910 IPR023506 Trans-aconitate 2-methyltransferase ISU55_07910 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal ISU55_07910 IPR041698 Methyltransferase domain 25 ISU55_07910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_07920 IPR000620 EamA domain ISU55_07925 IPR000758 Virulence-related outer membrane protein ISU55_07925 IPR027385 Outer membrane protein beta-barrel domain ISU55_07925 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_07945 IPR013149 Alcohol dehydrogenase, C-terminal ISU55_07945 IPR013154 Alcohol dehydrogenase, N-terminal ISU55_07945 IPR020843 Polyketide synthase, enoylreductase domain ISU55_07945 IPR036291 NAD(P)-binding domain superfamily ISU55_07945 IPR011032 GroES-like superfamily ISU55_07950 IPR028082 Periplasmic binding protein-like I ISU55_07950 IPR025997 Periplasmic binding protein ISU55_07955 IPR003439 ABC transporter-like ISU55_07955 IPR003593 AAA+ ATPase domain ISU55_07955 IPR017871 ABC transporter, conserved site ISU55_07955 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_07955 IPR015861 ABC transporter, ribose import, RbsA ISU55_07960 IPR001851 ABC transporter, permease ISU55_07965 IPR028082 Periplasmic binding protein-like I ISU55_07965 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_07965 IPR000843 LacI-type HTH domain ISU55_07970 IPR005119 LysR, substrate-binding ISU55_07970 IPR000847 Transcription regulator HTH, LysR ISU55_07970 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_07970 IPR036390 Winged helix DNA-binding domain superfamily ISU55_07975 IPR011829 Tartrate dehydrogenase ISU55_07975 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site ISU55_07975 IPR024084 Isopropylmalate dehydrogenase-like domain ISU55_07985 IPR000060 BCCT transporter family ISU55_07985 IPR018093 BCCT transporter, conserved site ISU55_07995 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_07995 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_07995 IPR000951 Phthalate dioxygenase reductase ISU55_07995 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_07995 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_07995 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_07995 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ISU55_07995 IPR039003 Carnitine monooxygenase reductase subunit ISU55_07995 IPR017938 Riboflavin synthase-like beta-barrel ISU55_07995 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site ISU55_07995 IPR012675 Beta-grasp domain superfamily ISU55_08000 IPR005565 Haemolysin activator HlyB, C-terminal ISU55_08000 IPR034746 POTRA domain ISU55_08000 IPR035251 ShlB, POTRA domain ISU55_08000 IPR013686 Polypeptide-transport-associated, ShlB-type ISU55_08000 IPR027282 Two partner secretion pathway transporter ISU55_08045 IPR012334 Pectin lyase fold ISU55_08045 IPR008619 Filamentous haemagglutinin repeat ISU55_08045 IPR011050 Pectin lyase fold/virulence factor ISU55_08045 IPR008638 Filamentous haemagglutinin, N-terminal ISU55_08045 IPR006914 VENN motif-containing domain ISU55_08045 IPR025157 Hemagglutinin repeat ISU55_08045 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ISU55_08045 IPR028190 Novel toxin 21 ISU55_08045 IPR038181 Novel toxin 21 superfamily ISU55_08055 IPR003439 ABC transporter-like ISU55_08055 IPR017871 ABC transporter, conserved site ISU55_08055 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08055 IPR015855 ABC transporter, maltose/maltodextrin import, MalK ISU55_08055 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_08055 IPR040582 MalK, OB fold domain ISU55_08055 IPR003593 AAA+ ATPase domain ISU55_08060 IPR005841 Alpha-D-phosphohexomutase superfamily ISU55_08060 IPR016066 Alpha-D-phosphohexomutase, conserved site ISU55_08060 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ISU55_08060 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ISU55_08060 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ISU55_08060 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ISU55_08060 IPR005843 Alpha-D-phosphohexomutase, C-terminal ISU55_08060 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ISU55_08065 IPR000843 LacI-type HTH domain ISU55_08065 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_08065 IPR028082 Periplasmic binding protein-like I ISU55_08075 IPR035906 MetI-like superfamily ISU55_08075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_08080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_08080 IPR035906 MetI-like superfamily ISU55_08085 IPR028583 4-O-beta-D-mannosyl-D-glucose phosphorylase ISU55_08085 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ISU55_08085 IPR007184 Mannoside phosphorylase ISU55_08105 IPR030192 Miniconductance mechanosensitive channel YbdG ISU55_08105 IPR011066 Mechanosensitive ion channel MscS, C-terminal ISU55_08105 IPR006685 Mechanosensitive ion channel MscS ISU55_08105 IPR010920 LSM domain superfamily ISU55_08110 IPR002729 CRISPR-associated protein Cas1 ISU55_08110 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain ISU55_08110 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain ISU55_08110 IPR019857 CRISPR-associated protein Cas1, YPEST subtype ISU55_08115 IPR006483 CRISPR-associated Cas3-type HD domain ISU55_08115 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08115 IPR038257 CRISPR-associated Cas3-type HD domain superfamily ISU55_08115 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type ISU55_08120 IPR013397 CRISPR-associated protein Csy1 ISU55_08125 IPR013398 CRISPR-associated protein Csy2 ISU55_08130 IPR013399 CRISPR-associated protein Csy3 ISU55_08135 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST ISU55_08140 IPR023210 NADP-dependent oxidoreductase domain ISU55_08140 IPR036812 NADP-dependent oxidoreductase domain superfamily ISU55_08140 IPR020471 Aldo/keto reductase ISU55_08160 IPR000847 Transcription regulator HTH, LysR ISU55_08160 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_08160 IPR005119 LysR, substrate-binding ISU55_08160 IPR036390 Winged helix DNA-binding domain superfamily ISU55_08165 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_08165 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily ISU55_08165 IPR000792 Transcription regulator LuxR, C-terminal ISU55_08165 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_08165 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain ISU55_08170 IPR016181 Acyl-CoA N-acyltransferase ISU55_08170 IPR018311 Autoinducer synthesis, conserved site ISU55_08170 IPR001690 Autoinducer synthase ISU55_08185 IPR001763 Rhodanese-like domain ISU55_08185 IPR036873 Rhodanese-like domain superfamily ISU55_08185 IPR022111 Rhodanase, C-terminal ISU55_08185 IPR020936 Uncharacterised protein family UPF0176 ISU55_08185 IPR040503 UPF0176, acylphosphatase-like domain ISU55_08190 IPR002549 Transmembrane protein TqsA-like ISU55_08200 IPR000792 Transcription regulator LuxR, C-terminal ISU55_08200 IPR001789 Signal transduction response regulator, receiver domain ISU55_08200 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_08205 IPR006076 FAD dependent oxidoreductase ISU55_08205 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_08205 IPR023493 N-methyl-L-tryptophan oxidase MTOX ISU55_08210 IPR001207 Transposase, mutator type ISU55_08220 IPR011008 Dimeric alpha-beta barrel ISU55_08220 IPR007138 Antibiotic biosynthesis monooxygenase domain ISU55_08225 IPR032466 Metal-dependent hydrolase ISU55_08225 IPR004721 Dihydroorotase homodimeric type ISU55_08225 IPR002195 Dihydroorotase, conserved site ISU55_08225 IPR006680 Amidohydrolase-related ISU55_08230 IPR010391 DNA damage-inducible protein DinI-like ISU55_08230 IPR036687 DinI-like superfamily ISU55_08235 IPR025730 Biofilm regulator BssS ISU55_08240 IPR001207 Transposase, mutator type ISU55_08245 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G ISU55_08245 IPR028878 Ribonuclease E ISU55_08245 IPR022967 RNA-binding domain, S1 ISU55_08245 IPR021968 Polyribonucleotide phosphorylase C-terminal ISU55_08245 IPR012340 Nucleic acid-binding, OB-fold ISU55_08245 IPR004659 Ribonuclease E/G ISU55_08245 IPR003029 S1 domain ISU55_08250 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_08250 IPR006145 Pseudouridine synthase, RsuA/RluA ISU55_08250 IPR002942 RNA-binding S4 domain ISU55_08250 IPR036986 RNA-binding S4 domain superfamily ISU55_08250 IPR006225 Pseudouridine synthase, RluC/RluD ISU55_08250 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ISU55_08255 IPR029001 Inosine triphosphate pyrophosphatase-like ISU55_08255 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein ISU55_08260 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria ISU55_08260 IPR003772 Large ribosomal RNA subunit accumulation protein YceD ISU55_08265 IPR011332 Zinc-binding ribosomal protein ISU55_08265 IPR002677 Ribosomal protein L32p ISU55_08270 IPR012281 Phospholipid biosynthesis protein, PlsX-like ISU55_08270 IPR003664 Fatty acid synthesis PlsX protein ISU55_08275 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU55_08275 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 ISU55_08275 IPR016039 Thiolase-like ISU55_08275 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal ISU55_08280 IPR014043 Acyl transferase ISU55_08280 IPR001227 Acyl transferase domain superfamily ISU55_08280 IPR024925 Malonyl CoA-acyl carrier protein transacylase ISU55_08280 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type ISU55_08280 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ISU55_08280 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ISU55_08285 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_08285 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ISU55_08285 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_08285 IPR036291 NAD(P)-binding domain superfamily ISU55_08290 IPR006162 Phosphopantetheine attachment site ISU55_08290 IPR003231 Acyl carrier protein (ACP) ISU55_08290 IPR009081 Phosphopantetheine binding ACP domain ISU55_08290 IPR036736 ACP-like superfamily ISU55_08295 IPR016039 Thiolase-like ISU55_08295 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ISU55_08295 IPR014030 Beta-ketoacyl synthase, N-terminal ISU55_08295 IPR014031 Beta-ketoacyl synthase, C-terminal ISU55_08295 IPR018201 Beta-ketoacyl synthase, active site ISU55_08295 IPR000794 Beta-ketoacyl synthase ISU55_08295 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 ISU55_08300 IPR036515 Transposase IS200-like superfamily ISU55_08300 IPR002686 Transposase IS200-like ISU55_08305 IPR036038 Aminotransferase-like, PLP-dependent enzymes ISU55_08305 IPR017824 Aminodeoxychorismate lyase, class IV ISU55_08305 IPR018300 Aminotransferase, class IV, conserved site ISU55_08305 IPR001544 Aminotransferase class IV ISU55_08310 IPR003770 Endolytic murein transglycosylase ISU55_08315 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08315 IPR039430 Thymidylate kinase-like domain ISU55_08315 IPR018094 Thymidylate kinase ISU55_08315 IPR018095 Thymidylate kinase, conserved site ISU55_08320 IPR015199 DNA polymerase III, delta subunit, C-terminal ISU55_08320 IPR004622 DNA polymerase III, delta prime subunit ISU55_08320 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ISU55_08320 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08325 IPR015991 Uncharacterised hydrolase TatD-type ISU55_08325 IPR032466 Metal-dependent hydrolase ISU55_08325 IPR001130 TatD family ISU55_08325 IPR018228 Deoxyribonuclease, TatD-related, conserved site ISU55_08330 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ISU55_08330 IPR036878 Glucose permease domain IIB ISU55_08330 IPR001996 Phosphotransferase system, IIB component, type 1 ISU55_08330 IPR013013 Phosphotransferase system, EIIC component, type 1 ISU55_08330 IPR003352 Phosphotransferase system, EIIC ISU55_08330 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component ISU55_08330 IPR011299 PTS system glucose-specific IIBC component ISU55_08335 IPR036515 Transposase IS200-like superfamily ISU55_08335 IPR002686 Transposase IS200-like ISU55_08340 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal ISU55_08340 IPR036291 NAD(P)-binding domain superfamily ISU55_08345 IPR019808 Histidine triad, conserved site ISU55_08345 IPR001310 Histidine triad (HIT) protein ISU55_08345 IPR011146 HIT-like domain ISU55_08345 IPR036265 HIT-like superfamily ISU55_08350 IPR010824 Protein of unknown function DUF1425 ISU55_08350 IPR038483 YcfL-like superfamily ISU55_08355 IPR012640 Membrane lipoprotein, lipid attachment site ISU55_08355 IPR014094 Penicillin-binding protein activator LpoB ISU55_08360 IPR014093 Thiamine kinase ISU55_08360 IPR002575 Aminoglycoside phosphotransferase ISU55_08360 IPR011009 Protein kinase-like domain superfamily ISU55_08365 IPR022956 Beta-hexosaminidase, bacterial ISU55_08365 IPR017853 Glycoside hydrolase superfamily ISU55_08365 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily ISU55_08365 IPR019800 Glycoside hydrolase, family 3, active site ISU55_08365 IPR001764 Glycoside hydrolase, family 3, N-terminal ISU55_08370 IPR029058 Alpha/Beta hydrolase fold ISU55_08370 IPR022987 Uncharacterised protein family UPF0227 ISU55_08370 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ISU55_08375 IPR023753 FAD/NAD(P)-binding domain ISU55_08375 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_08390 IPR001207 Transposase, mutator type ISU55_08395 IPR008816 Glycine zipper 2TM domain ISU55_08400 IPR041471 UvrB, interaction domain ISU55_08400 IPR003711 CarD-like/TRCF domain ISU55_08400 IPR036101 CarD-like/TRCF domain superfamily ISU55_08400 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_08400 IPR011545 DEAD/DEAH box helicase domain ISU55_08400 IPR001650 Helicase, C-terminal ISU55_08400 IPR004576 Transcription-repair coupling factor ISU55_08400 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08400 IPR005118 Transcription-repair-coupling factor, C-terminal domain ISU55_08400 IPR037235 TRCF-like, C-terminal domain ISU55_08405 IPR003838 ABC transporter permease protein domain ISU55_08405 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E ISU55_08405 IPR025857 MacB-like periplasmic core domain ISU55_08410 IPR003593 AAA+ ATPase domain ISU55_08410 IPR003439 ABC transporter-like ISU55_08410 IPR017871 ABC transporter, conserved site ISU55_08410 IPR015854 ABC transporter, lipoprotein release, LolD ISU55_08410 IPR011924 Lipoprotein releasing system, ATP-binding protein ISU55_08410 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08415 IPR003838 ABC transporter permease protein domain ISU55_08415 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E ISU55_08415 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type ISU55_08415 IPR025857 MacB-like periplasmic core domain ISU55_08420 IPR000600 ROK family ISU55_08425 IPR023505 N-acetyl-D-glucosamine kinase ISU55_08425 IPR000600 ROK family ISU55_08430 IPR003000 Sirtuin family ISU55_08430 IPR026591 Sirtuin, catalytic core small domain superfamily ISU55_08430 IPR026590 Sirtuin family, catalytic core domain ISU55_08430 IPR029035 DHS-like NAD/FAD-binding domain superfamily ISU55_08430 IPR027546 Sirtuin, class III ISU55_08435 IPR010161 Peptidase M20B, tripeptide aminopeptidase ISU55_08435 IPR011650 Peptidase M20, dimerisation domain ISU55_08435 IPR002933 Peptidase M20 ISU55_08435 IPR036264 Bacterial exopeptidase dimerisation domain ISU55_08435 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ISU55_08440 IPR003347 JmjC domain ISU55_08440 IPR039994 JmjC domain-containing ISU55_08445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_08445 IPR003660 HAMP domain ISU55_08445 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_08445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_08445 IPR005467 Histidine kinase domain ISU55_08445 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_08445 IPR015014 PhoQ Sensor ISU55_08445 IPR038429 PhoQ Sensor superfamily ISU55_08450 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_08450 IPR039420 Transcriptional regulatory protein WalR-like ISU55_08450 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_08450 IPR011006 CheY-like superfamily ISU55_08450 IPR001789 Signal transduction response regulator, receiver domain ISU55_08460 IPR024083 Fumarase/histidase, N-terminal ISU55_08460 IPR000362 Fumarate lyase family ISU55_08460 IPR022761 Fumarate lyase, N-terminal ISU55_08460 IPR004769 Adenylosuccinate lyase ISU55_08460 IPR013539 Adenylosuccinate lyase PurB, C-terminal ISU55_08460 IPR008948 L-Aspartase-like ISU55_08460 IPR020557 Fumarate lyase, conserved site ISU55_08465 IPR007451 High frequency lysogenization protein HflD ISU55_08465 IPR035932 HflD-like superfamily ISU55_08470 IPR023382 Adenine nucleotide alpha hydrolase-like domains ISU55_08470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_08470 IPR004506 tRNA-specific 2-thiouridylase ISU55_08475 IPR020084 NUDIX hydrolase, conserved site ISU55_08475 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_08475 IPR020476 NUDIX hydrolase ISU55_08475 IPR000086 NUDIX hydrolase domain ISU55_08475 IPR033713 Phosphatase NudJ ISU55_08480 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ISU55_08480 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain ISU55_08480 IPR006145 Pseudouridine synthase, RsuA/RluA ISU55_08480 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ISU55_08480 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_08485 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic ISU55_08485 IPR024084 Isopropylmalate dehydrogenase-like domain ISU55_08485 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site ISU55_08490 IPR001761 Periplasmic binding protein/LacI sugar binding domain ISU55_08490 IPR000843 LacI-type HTH domain ISU55_08490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_08490 IPR028082 Periplasmic binding protein-like I ISU55_08500 IPR013655 PAS fold-3 ISU55_08500 IPR004090 Chemotaxis methyl-accepting receptor ISU55_08500 IPR000014 PAS domain ISU55_08500 IPR003660 HAMP domain ISU55_08500 IPR035965 PAS domain superfamily ISU55_08500 IPR001610 PAC motif ISU55_08500 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU55_08505 IPR036291 NAD(P)-binding domain superfamily ISU55_08505 IPR008030 NmrA-like domain ISU55_08510 IPR002577 Helix-turn-helix, HxlR type ISU55_08510 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_08510 IPR036390 Winged helix DNA-binding domain superfamily ISU55_08520 IPR029033 Histidine phosphatase superfamily ISU55_08520 IPR033379 Histidine acid phosphatase active site ISU55_08520 IPR000560 Histidine phosphatase superfamily, clade-2 ISU55_08525 IPR017704 Putative selenium-binding protein YdfZ ISU55_08535 IPR011991 ArsR-like helix-turn-helix domain ISU55_08535 IPR000485 AsnC-type HTH domain ISU55_08535 IPR011008 Dimeric alpha-beta barrel ISU55_08535 IPR036390 Winged helix DNA-binding domain superfamily ISU55_08535 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_08535 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ISU55_08535 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ISU55_08535 IPR019888 Transcription regulator AsnC-type ISU55_08545 IPR019713 Inner membrane protein YlaC ISU55_08550 IPR013154 Alcohol dehydrogenase, N-terminal ISU55_08550 IPR011032 GroES-like superfamily ISU55_08550 IPR014043 Acyl transferase ISU55_08550 IPR036736 ACP-like superfamily ISU55_08550 IPR013149 Alcohol dehydrogenase, C-terminal ISU55_08550 IPR014031 Beta-ketoacyl synthase, C-terminal ISU55_08550 IPR014030 Beta-ketoacyl synthase, N-terminal ISU55_08550 IPR018201 Beta-ketoacyl synthase, active site ISU55_08550 IPR036291 NAD(P)-binding domain superfamily ISU55_08550 IPR016039 Thiolase-like ISU55_08550 IPR009081 Phosphopantetheine binding ACP domain ISU55_08550 IPR020806 Polyketide synthase, phosphopantetheine-binding domain ISU55_08550 IPR013968 Polyketide synthase, ketoreductase domain ISU55_08550 IPR020843 Polyketide synthase, enoylreductase domain ISU55_08550 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ISU55_08550 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ISU55_08550 IPR020807 Polyketide synthase, dehydratase domain ISU55_08550 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ISU55_08550 IPR032821 Ketoacyl-synthetase, C-terminal extension ISU55_08550 IPR042104 Polyketide synthase, dehydratase domain superfamily ISU55_08555 IPR001270 ClpA/B family ISU55_08555 IPR003593 AAA+ ATPase domain ISU55_08555 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_08555 IPR002611 IstB-like ATP-binding protein ISU55_08555 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08560 IPR012337 Ribonuclease H-like superfamily ISU55_08560 IPR006120 Resolvase, HTH domain ISU55_08560 IPR036397 Ribonuclease H superfamily ISU55_08560 IPR017894 HTH domain, IS21 transposase-type ISU55_08560 IPR001584 Integrase, catalytic core ISU55_08565 IPR013783 Immunoglobulin-like fold ISU55_08565 IPR004199 Beta galactosidase small chain/ domain 5 ISU55_08565 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ISU55_08565 IPR011013 Galactose mutarotase-like domain superfamily ISU55_08565 IPR032312 Beta-galactosidase, domain 4 ISU55_08565 IPR014718 Glycoside hydrolase-type carbohydrate-binding ISU55_08565 IPR006101 Glycoside hydrolase, family 2 ISU55_08565 IPR008979 Galactose-binding-like domain superfamily ISU55_08565 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase ISU55_08565 IPR006103 Glycoside hydrolase family 2, catalytic domain ISU55_08565 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich ISU55_08565 IPR006104 Glycosyl hydrolases family 2, sugar binding domain ISU55_08565 IPR017853 Glycoside hydrolase superfamily ISU55_08565 IPR023232 Glycoside hydrolase, family 2, active site ISU55_08565 IPR023230 Glycoside hydrolase, family 2, conserved site ISU55_08570 IPR012340 Nucleic acid-binding, OB-fold ISU55_08570 IPR002059 Cold-shock protein, DNA-binding ISU55_08570 IPR019844 Cold-shock (CSD) domain ISU55_08570 IPR011129 Cold shock domain ISU55_08570 IPR012156 Cold shock, CspA ISU55_08575 IPR019717 Dextransucrase DSRB ISU55_08585 IPR003416 MgtC/SapB/SrpB/YhiD family ISU55_08590 IPR036412 HAD-like superfamily ISU55_08590 IPR023214 HAD superfamily ISU55_08590 IPR006415 P-type ATPase, subfamily IIIB ISU55_08590 IPR001757 P-type ATPase ISU55_08590 IPR004014 Cation-transporting P-type ATPase, N-terminal ISU55_08590 IPR023299 P-type ATPase, cytoplasmic domain N ISU55_08590 IPR018303 P-type ATPase, phosphorylation site ISU55_08590 IPR023298 P-type ATPase, transmembrane domain superfamily ISU55_08590 IPR008250 P-type ATPase, A domain superfamily ISU55_08590 IPR006068 Cation-transporting P-type ATPase, C-terminal ISU55_08600 IPR007944 Flagellar transcriptional activator FlhC ISU55_08605 IPR000540 Flagellar motor protein MotA, conserved site ISU55_08605 IPR022522 Flagellar motor stator, MotA ISU55_08605 IPR002898 MotA/TolQ/ExbB proton channel ISU55_08610 IPR036737 OmpA-like domain superfamily ISU55_08610 IPR025713 Motility protein B, N-terminal domain ISU55_08610 IPR006665 OmpA-like domain ISU55_08615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_08615 IPR036061 CheW-like domain superfamily ISU55_08615 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ISU55_08615 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily ISU55_08615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_08615 IPR004105 Histidine kinase CheA-like, homodimeric domain ISU55_08615 IPR015162 CheY binding ISU55_08615 IPR035891 CheY-binding domain of CheA ISU55_08615 IPR002545 CheW-like domain ISU55_08615 IPR005467 Histidine kinase domain ISU55_08615 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_08615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_08615 IPR036641 HPT domain superfamily ISU55_08620 IPR002545 CheW-like domain ISU55_08620 IPR039315 Chemotaxis protein CheW ISU55_08620 IPR036061 CheW-like domain superfamily ISU55_08625 IPR020846 Major facilitator superfamily domain ISU55_08625 IPR011701 Major facilitator superfamily ISU55_08625 IPR036259 MFS transporter superfamily ISU55_08630 IPR035959 RutC-like superfamily ISU55_08630 IPR019897 RidA, conserved site ISU55_08630 IPR006056 RidA family ISU55_08630 IPR006175 YjgF/YER057c/UK114 family ISU55_08640 IPR039445 Transcriptional regulator DauR-like, HTH domain ISU55_08640 IPR039446 Transcriptional regulator DauR-like ISU55_08640 IPR013559 YheO-like ISU55_08645 IPR036709 Autotransporter beta-domain superfamily ISU55_08645 IPR005546 Autotransporter beta-domain ISU55_08645 IPR011050 Pectin lyase fold/virulence factor ISU55_08645 IPR006315 Outer membrane autotransporter barrel ISU55_08645 IPR013425 Autotransporter-associated beta strand repeat ISU55_08645 IPR012332 P22 tailspike-like, C-terminal domain superfamily ISU55_08660 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site ISU55_08660 IPR004090 Chemotaxis methyl-accepting receptor ISU55_08660 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily ISU55_08660 IPR003660 HAMP domain ISU55_08660 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU55_08660 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ISU55_08665 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily ISU55_08665 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU55_08665 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site ISU55_08665 IPR004090 Chemotaxis methyl-accepting receptor ISU55_08665 IPR003660 HAMP domain ISU55_08665 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ISU55_08670 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily ISU55_08670 IPR000780 MCP methyltransferase, CheR-type ISU55_08670 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ISU55_08670 IPR026024 Chemotaxis protein methyltransferase CheR ISU55_08670 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ISU55_08670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_08675 IPR035909 Methylesterase CheB, C-terminal ISU55_08675 IPR011006 CheY-like superfamily ISU55_08675 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase ISU55_08675 IPR001789 Signal transduction response regulator, receiver domain ISU55_08675 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type ISU55_08680 IPR011006 CheY-like superfamily ISU55_08680 IPR001789 Signal transduction response regulator, receiver domain ISU55_08685 IPR007439 Chemotaxis phosphatase, CheZ ISU55_08690 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily ISU55_08690 IPR036365 PGBD-like superfamily ISU55_08690 IPR002502 N-acetylmuramoyl-L-alanine amidase domain ISU55_08690 IPR036366 PGBD superfamily ISU55_08695 IPR008640 Head domain of trimeric autotransporter adhesin ISU55_08695 IPR008635 Coiled stalk of trimeric autotransporter adhesin ISU55_08695 IPR024973 ESPR domain ISU55_08695 IPR011049 Serralysin-like metalloprotease, C-terminal ISU55_08695 IPR005594 YadA-like, C-terminal ISU55_08700 IPR005594 YadA-like, C-terminal ISU55_08700 IPR008640 Head domain of trimeric autotransporter adhesin ISU55_08700 IPR011049 Serralysin-like metalloprotease, C-terminal ISU55_08700 IPR024973 ESPR domain ISU55_08700 IPR008635 Coiled stalk of trimeric autotransporter adhesin ISU55_08710 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ISU55_08710 IPR001608 Alanine racemase, N-terminal ISU55_08710 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site ISU55_08710 IPR000821 Alanine racemase ISU55_08710 IPR011079 Alanine racemase, C-terminal ISU55_08710 IPR029066 PLP-binding barrel ISU55_08735 IPR003593 AAA+ ATPase domain ISU55_08735 IPR001270 ClpA/B family ISU55_08735 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_08735 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08735 IPR002611 IstB-like ATP-binding protein ISU55_08740 IPR017894 HTH domain, IS21 transposase-type ISU55_08740 IPR012337 Ribonuclease H-like superfamily ISU55_08740 IPR001584 Integrase, catalytic core ISU55_08740 IPR006120 Resolvase, HTH domain ISU55_08740 IPR036397 Ribonuclease H superfamily ISU55_08750 IPR009950 Protein of unknown function DUF1480 ISU55_08765 IPR008962 PapD-like superfamily ISU55_08765 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_08765 IPR001829 Pili assembly chaperone, bacterial ISU55_08765 IPR016148 Pili assembly chaperone, C-terminal ISU55_08765 IPR018046 Pili assembly chaperone, conserved site ISU55_08765 IPR016147 Pili assembly chaperone, N-terminal ISU55_08765 IPR013783 Immunoglobulin-like fold ISU55_08785 IPR003399 Mce/MlaD ISU55_08790 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type ISU55_08790 IPR011031 Multihaem cytochrome ISU55_08790 IPR007498 Intermembrane transport protein PqiA-like ISU55_08795 IPR000614 Free Met sulfoxide reductase conserved site ISU55_08795 IPR003018 GAF domain ISU55_08795 IPR029016 GAF-like domain superfamily ISU55_08800 IPR036442 ProQ/FinO domain superfamily ISU55_08800 IPR035236 RNA chaperone ProQ, C-terminal ISU55_08800 IPR016103 ProQ/FinO domain ISU55_08800 IPR023529 RNA chaperone ProQ ISU55_08805 IPR005151 Tail specific protease ISU55_08805 IPR004447 C-terminal-processing peptidase S41A ISU55_08805 IPR036034 PDZ superfamily ISU55_08805 IPR001478 PDZ domain ISU55_08805 IPR029045 ClpP/crotonase-like domain superfamily ISU55_08805 IPR040573 Tail specific protease, N-terminal domain ISU55_08805 IPR020992 Tail specific protease, C-terminal ISU55_08810 IPR001915 Peptidase M48 ISU55_08810 IPR022919 Peptidase M48, protease HtpX, putative ISU55_08815 IPR000259 Fimbrial-type adhesion domain ISU55_08815 IPR036937 Fimbrial-type adhesion domain superfamily ISU55_08815 IPR008966 Adhesion domain superfamily ISU55_08820 IPR001829 Pili assembly chaperone, bacterial ISU55_08820 IPR016147 Pili assembly chaperone, N-terminal ISU55_08820 IPR018046 Pili assembly chaperone, conserved site ISU55_08820 IPR008962 PapD-like superfamily ISU55_08820 IPR016148 Pili assembly chaperone, C-terminal ISU55_08820 IPR013783 Immunoglobulin-like fold ISU55_08820 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_08825 IPR037224 PapC, N-terminal domain superfamily ISU55_08825 IPR025885 PapC, N-terminal domain ISU55_08825 IPR025949 PapC-like, C-terminal domain ISU55_08825 IPR042186 Outer membrane usher protein FimD, plug domain ISU55_08825 IPR000015 Outer membrane usher protein ISU55_08825 IPR018030 Fimbrial membrane usher, conserved site ISU55_08835 IPR008962 PapD-like superfamily ISU55_08835 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_08835 IPR016148 Pili assembly chaperone, C-terminal ISU55_08835 IPR001829 Pili assembly chaperone, bacterial ISU55_08835 IPR013783 Immunoglobulin-like fold ISU55_08835 IPR016147 Pili assembly chaperone, N-terminal ISU55_08835 IPR018046 Pili assembly chaperone, conserved site ISU55_08840 IPR036259 MFS transporter superfamily ISU55_08840 IPR020846 Major facilitator superfamily domain ISU55_08840 IPR011701 Major facilitator superfamily ISU55_08845 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ISU55_08845 IPR027946 Oligogalacturonate lyase domain ISU55_08850 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_08850 IPR011991 ArsR-like helix-turn-helix domain ISU55_08850 IPR029016 GAF-like domain superfamily ISU55_08850 IPR014757 Transcription regulator IclR, C-terminal ISU55_08850 IPR005471 Transcription regulator IclR, N-terminal ISU55_08850 IPR036390 Winged helix DNA-binding domain superfamily ISU55_08855 IPR036365 PGBD-like superfamily ISU55_08855 IPR036366 PGBD superfamily ISU55_08855 IPR002502 N-acetylmuramoyl-L-alanine amidase domain ISU55_08855 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily ISU55_08860 IPR036458 Sodium:dicarboxylate symporter superfamily ISU55_08860 IPR001991 Sodium:dicarboxylate symporter ISU55_08865 IPR007404 LexA-binding, inner membrane-associated putative hydrolase ISU55_08865 IPR016956 Inner membrane protein YdjM ISU55_08870 IPR009331 Oligogalacturonate-specific porin ISU55_08875 IPR006059 Bacterial extracellular solute-binding protein ISU55_08880 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08880 IPR005116 Transport-associated OB, type 1 ISU55_08880 IPR040582 MalK, OB fold domain ISU55_08880 IPR003593 AAA+ ATPase domain ISU55_08880 IPR003439 ABC transporter-like ISU55_08880 IPR017871 ABC transporter, conserved site ISU55_08880 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_08885 IPR035906 MetI-like superfamily ISU55_08885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_08890 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_08890 IPR035906 MetI-like superfamily ISU55_08895 IPR010702 Periplasmic pectate lyase ISU55_08900 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_08900 IPR036291 NAD(P)-binding domain superfamily ISU55_08900 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase ISU55_08900 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_08905 IPR021120 KduI/IolB isomerase ISU55_08905 IPR011051 RmlC-like cupin domain superfamily ISU55_08905 IPR014710 RmlC-like jelly roll fold ISU55_08905 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal ISU55_08905 IPR007045 5-keto 4-deoxyuronate isomerase ISU55_08910 IPR014710 RmlC-like jelly roll fold ISU55_08910 IPR025499 Pectin degradation protein KdgF ISU55_08910 IPR013096 Cupin 2, conserved barrel ISU55_08910 IPR011051 RmlC-like cupin domain superfamily ISU55_08915 IPR001207 Transposase, mutator type ISU55_08920 IPR023214 HAD superfamily ISU55_08920 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_08920 IPR006439 HAD hydrolase, subfamily IA ISU55_08920 IPR036412 HAD-like superfamily ISU55_08920 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ISU55_08925 IPR025229 YniB-like protein ISU55_08930 IPR011009 Protein kinase-like domain superfamily ISU55_08930 IPR016477 Fructosamine/Ketosamine-3-kinase ISU55_08940 IPR037294 ABC transporter, BtuC-like ISU55_08940 IPR001626 ABC transporter, TroCD-like ISU55_08945 IPR001626 ABC transporter, TroCD-like ISU55_08945 IPR037294 ABC transporter, BtuC-like ISU55_08950 IPR017871 ABC transporter, conserved site ISU55_08950 IPR003593 AAA+ ATPase domain ISU55_08950 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_08950 IPR003439 ABC transporter-like ISU55_08955 IPR006129 Adhesin B ISU55_08955 IPR006128 Adhesion lipoprotein ISU55_08955 IPR006127 Periplasmic solute binding protein, ZnuA-like ISU55_08960 IPR023346 Lysozyme-like domain superfamily ISU55_08960 IPR000189 Prokaryotic transglycosylase, active site ISU55_08960 IPR008258 Transglycosylase SLT domain 1 ISU55_08960 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A ISU55_08965 IPR002771 Multiple antibiotic resistance (MarC)-related ISU55_08975 IPR025309 KTSC domain ISU55_08980 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ISU55_08980 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_08980 IPR004154 Anticodon-binding ISU55_08980 IPR036621 Anticodon-binding domain superfamily ISU55_08980 IPR004095 TGS ISU55_08980 IPR012676 TGS-like ISU55_08980 IPR002320 Threonine-tRNA ligase, class IIa ISU55_08980 IPR012947 Threonyl/alanyl tRNA synthetase, SAD ISU55_08980 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily ISU55_08980 IPR033728 Threonine-tRNA ligase catalytic core domain ISU55_08980 IPR012675 Beta-grasp domain superfamily ISU55_08985 IPR019814 Translation initiation factor 3, N-terminal ISU55_08985 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily ISU55_08985 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily ISU55_08985 IPR019813 Translation initiation factor 3, conserved site ISU55_08985 IPR001288 Translation initiation factor 3 ISU55_08985 IPR019815 Translation initiation factor 3, C-terminal ISU55_08990 IPR037229 Ribosomal protein L35 superfamily ISU55_08990 IPR001706 Ribosomal protein L35, non-mitochondrial ISU55_08990 IPR018265 Ribosomal protein L35, conserved site ISU55_08990 IPR021137 Ribosomal protein L35 ISU55_08995 IPR005813 Ribosomal protein L20 ISU55_08995 IPR035566 Ribosomal protein L20, C-terminal ISU55_09005 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal ISU55_09005 IPR002319 Phenylalanyl-tRNA synthetase ISU55_09005 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit ISU55_09005 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial ISU55_09005 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_09005 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ISU55_09010 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain ISU55_09010 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 ISU55_09010 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit ISU55_09010 IPR012340 Nucleic acid-binding, OB-fold ISU55_09010 IPR002547 tRNA-binding domain ISU55_09010 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain ISU55_09010 IPR005147 tRNA synthetase, B5-domain ISU55_09010 IPR005146 B3/B4 tRNA-binding domain ISU55_09010 IPR009061 Putative DNA-binding domain superfamily ISU55_09010 IPR005121 Ferrodoxin-fold anticodon-binding domain ISU55_09010 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily ISU55_09015 IPR000119 Histone-like DNA-binding protein ISU55_09015 IPR020816 Histone-like DNA-binding protein, conserved site ISU55_09015 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ISU55_09015 IPR005684 Integration host factor, alpha subunit ISU55_09025 IPR037294 ABC transporter, BtuC-like ISU55_09025 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC ISU55_09025 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_09030 IPR033674 Thioredoxin/glutathione peroxidase BtuE ISU55_09030 IPR000889 Glutathione peroxidase ISU55_09030 IPR029759 Glutathione peroxidase active site ISU55_09030 IPR029760 Glutathione peroxidase conserved site ISU55_09030 IPR036249 Thioredoxin-like superfamily ISU55_09035 IPR003593 AAA+ ATPase domain ISU55_09035 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09035 IPR023693 ABC transporter, vitamin B12, BtuD ISU55_09035 IPR003439 ABC transporter-like ISU55_09035 IPR017871 ABC transporter, conserved site ISU55_09040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_09040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_09040 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_09040 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ISU55_09040 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB ISU55_09045 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ISU55_09045 IPR001173 Glycosyltransferase 2-like ISU55_09045 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_09050 IPR002376 Formyl transferase, N-terminal ISU55_09050 IPR036291 NAD(P)-binding domain superfamily ISU55_09050 IPR005793 Formyl transferase, C-terminal ISU55_09050 IPR001509 NAD-dependent epimerase/dehydratase ISU55_09050 IPR021168 Bifunctional polymyxin resistance protein, ArnA ISU55_09050 IPR036477 Formyl transferase, N-terminal domain superfamily ISU55_09050 IPR011034 Formyl transferase-like, C-terminal domain superfamily ISU55_09055 IPR002509 NodB homology domain ISU55_09055 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ISU55_09055 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable ISU55_09060 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase ISU55_09060 IPR003342 Glycosyl transferase family 39/83 ISU55_09065 IPR000390 Small multidrug resistance protein family ISU55_09065 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE ISU55_09065 IPR000620 EamA domain ISU55_09070 IPR000390 Small multidrug resistance protein family ISU55_09070 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF ISU55_09080 IPR000064 Endopeptidase, NLPC/P60 domain ISU55_09080 IPR038765 Papain-like cysteine peptidase superfamily ISU55_09085 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ISU55_09085 IPR004562 Lipoyltransferase/lipoate-protein ligase ISU55_09085 IPR019491 Lipoate protein ligase, C-terminal ISU55_09085 IPR023741 Lipoate-protein ligase A ISU55_09095 IPR006218 DAHP synthetase I/KDSA ISU55_09095 IPR013785 Aldolase-type TIM barrel ISU55_09095 IPR006219 DHAP synthase, class 1 ISU55_09100 IPR026530 Phosphoenolpyruvate synthase regulatory protein ISU55_09100 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily ISU55_09100 IPR005177 Bifunctional kinase-pyrophosphorylase ISU55_09105 IPR006319 Phosphoenolpyruvate synthase ISU55_09105 IPR040442 Pyruvate kinase-like domain superfamily ISU55_09105 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_09105 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding ISU55_09105 IPR036637 Phosphohistidine domain superfamily ISU55_09105 IPR023151 PEP-utilising enzyme, conserved site ISU55_09105 IPR000121 PEP-utilising enzyme, C-terminal ISU55_09105 IPR018274 PEP-utilising enzyme, active site ISU55_09105 IPR008279 PEP-utilising enzyme, mobile domain ISU55_09105 IPR013815 ATP-grasp fold, subdomain 1 ISU55_09115 IPR002549 Transmembrane protein TqsA-like ISU55_09120 IPR016166 FAD-binding domain, PCMH-type ISU55_09120 IPR006094 FAD linked oxidase, N-terminal ISU55_09120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_09120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_09120 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_09120 IPR016164 FAD-linked oxidase-like, C-terminal ISU55_09120 IPR004113 FAD-linked oxidase, C-terminal ISU55_09120 IPR009051 Alpha-helical ferredoxin ISU55_09125 IPR006683 Thioesterase domain ISU55_09125 IPR003736 Phenylacetic acid degradation-related domain ISU55_09125 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI ISU55_09125 IPR029069 HotDog domain superfamily ISU55_09130 IPR011298 FeS assembly scaffold SufA ISU55_09130 IPR035903 HesB-like domain superfamily ISU55_09130 IPR017870 FeS cluster insertion, C-terminal, conserved site ISU55_09130 IPR016092 FeS cluster insertion protein ISU55_09130 IPR000361 FeS cluster biogenesis ISU55_09135 IPR010231 SUF system FeS cluster assembly, SufB ISU55_09135 IPR000825 SUF system FeS cluster assembly, SufBD ISU55_09135 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ISU55_09140 IPR003593 AAA+ ATPase domain ISU55_09140 IPR003439 ABC transporter-like ISU55_09140 IPR017871 ABC transporter, conserved site ISU55_09140 IPR010230 FeS cluster assembly SUF system, ATPase SufC ISU55_09140 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09145 IPR011542 SUF system FeS cluster assembly, SufD ISU55_09145 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ISU55_09145 IPR000825 SUF system FeS cluster assembly, SufBD ISU55_09150 IPR010970 Cysteine desulfurase, SufS ISU55_09150 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ISU55_09150 IPR000192 Aminotransferase class V domain ISU55_09150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_09150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_09150 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_09155 IPR003808 Fe-S metabolism associated domain, SufE-like ISU55_09155 IPR023939 Cysteine desulfuration protein SufE ISU55_09160 IPR041597 L,D-transpeptidase C-terminal domain ISU55_09160 IPR018392 LysM domain ISU55_09160 IPR005490 L,D-transpeptidase catalytic domain ISU55_09160 IPR038063 L,D-transpeptidase catalytic domain-like ISU55_09170 IPR003593 AAA+ ATPase domain ISU55_09170 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_09170 IPR002611 IstB-like ATP-binding protein ISU55_09170 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09170 IPR001270 ClpA/B family ISU55_09175 IPR017894 HTH domain, IS21 transposase-type ISU55_09175 IPR006120 Resolvase, HTH domain ISU55_09175 IPR012337 Ribonuclease H-like superfamily ISU55_09175 IPR001584 Integrase, catalytic core ISU55_09175 IPR036397 Ribonuclease H superfamily ISU55_09180 IPR036515 Transposase IS200-like superfamily ISU55_09180 IPR002686 Transposase IS200-like ISU55_09185 IPR006817 Lipoprotein leucine-zipper ISU55_09185 IPR016367 Murein-lipoprotein ISU55_09190 IPR001697 Pyruvate kinase ISU55_09190 IPR018209 Pyruvate kinase, active site ISU55_09190 IPR015793 Pyruvate kinase, barrel ISU55_09190 IPR015795 Pyruvate kinase, C-terminal ISU55_09190 IPR011037 Pyruvate kinase-like, insert domain superfamily ISU55_09190 IPR040442 Pyruvate kinase-like domain superfamily ISU55_09190 IPR015806 Pyruvate kinase, insert domain superfamily ISU55_09190 IPR036918 Pyruvate kinase, C-terminal domain superfamily ISU55_09190 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_09205 IPR022913 Multidrug resistance protein MdtK ISU55_09205 IPR002528 Multi antimicrobial extrusion protein ISU55_09215 IPR017938 Riboflavin synthase-like beta-barrel ISU55_09215 IPR001783 Lumazine-binding protein ISU55_09215 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily ISU55_09215 IPR026017 Lumazine-binding domain ISU55_09220 IPR003333 Mycolic acid cyclopropane synthase ISU55_09220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_09225 IPR004812 Drug resistance transporter Bcr/CmlA subfamily ISU55_09225 IPR011701 Major facilitator superfamily ISU55_09225 IPR020846 Major facilitator superfamily domain ISU55_09225 IPR036259 MFS transporter superfamily ISU55_09230 IPR036390 Winged helix DNA-binding domain superfamily ISU55_09230 IPR005119 LysR, substrate-binding ISU55_09230 IPR000847 Transcription regulator HTH, LysR ISU55_09230 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_09235 IPR028082 Periplasmic binding protein-like I ISU55_09235 IPR023588 Transcription regulator HTH, PurR ISU55_09235 IPR000843 LacI-type HTH domain ISU55_09235 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_09245 IPR019833 Manganese/iron superoxide dismutase, binding site ISU55_09245 IPR019832 Manganese/iron superoxide dismutase, C-terminal ISU55_09245 IPR019831 Manganese/iron superoxide dismutase, N-terminal ISU55_09245 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily ISU55_09245 IPR001189 Manganese/iron superoxide dismutase ISU55_09245 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily ISU55_09250 IPR000064 Endopeptidase, NLPC/P60 domain ISU55_09250 IPR038765 Papain-like cysteine peptidase superfamily ISU55_09255 IPR002109 Glutaredoxin ISU55_09255 IPR033658 Glutaredoxin, PICOT-like ISU55_09255 IPR036249 Thioredoxin-like superfamily ISU55_09255 IPR004480 Monothiol glutaredoxin-related ISU55_09255 IPR014434 Monothiol glutaredoxin ISU55_09265 IPR013520 Exonuclease, RNase T/DNA polymerase III ISU55_09265 IPR005987 Ribonuclease T ISU55_09265 IPR012337 Ribonuclease H-like superfamily ISU55_09265 IPR036397 Ribonuclease H superfamily ISU55_09270 IPR004361 Glyoxalase I ISU55_09270 IPR037523 Vicinal oxygen chelate (VOC) domain ISU55_09270 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ISU55_09270 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ISU55_09270 IPR018146 Glyoxalase I, conserved site ISU55_09280 IPR011075 Tetracyclin repressor-like, C-terminal domain ISU55_09280 IPR009057 Homeobox-like domain superfamily ISU55_09280 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ISU55_09280 IPR001647 DNA-binding HTH domain, TetR-type ISU55_09285 IPR000917 Sulfatase, N-terminal ISU55_09285 IPR012549 Phosphoethanolamine transferase, N-terminal ISU55_09285 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_09285 IPR040423 Phosphoethanolamine transferase ISU55_09290 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_09290 IPR023071 Transcriptional regulator, SlyA ISU55_09290 IPR023187 Transcriptional regulator MarR-type, conserved site ISU55_09290 IPR000835 MarR-type HTH domain ISU55_09290 IPR036390 Winged helix DNA-binding domain superfamily ISU55_09295 IPR008816 Glycine zipper 2TM domain ISU55_09300 IPR005338 Anhydro-N-acetylmuramic acid kinase ISU55_09305 IPR036328 C-type lysozyme inhibitor superfamily ISU55_09305 IPR018660 C-type lysozyme inhibitor ISU55_09310 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal ISU55_09310 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site ISU55_09310 IPR012349 FMN-binding split barrel ISU55_09310 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative ISU55_09310 IPR000659 Pyridoxamine 5'-phosphate oxidase ISU55_09315 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_09315 IPR002305 Aminoacyl-tRNA synthetase, class Ic ISU55_09315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_09315 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 ISU55_09315 IPR024088 Tyrosine-tRNA ligase, bacterial-type ISU55_09315 IPR002307 Tyrosine-tRNA ligase ISU55_09315 IPR036986 RNA-binding S4 domain superfamily ISU55_09315 IPR002942 RNA-binding S4 domain ISU55_09320 IPR029056 Ribokinase-like ISU55_09320 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase ISU55_09320 IPR023685 Pyridoxal kinase PdxY ISU55_09320 IPR004625 Pyridoxine kinase ISU55_09325 IPR004045 Glutathione S-transferase, N-terminal ISU55_09325 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ISU55_09325 IPR010987 Glutathione S-transferase, C-terminal-like ISU55_09325 IPR004046 Glutathione S-transferase, C-terminal ISU55_09325 IPR036249 Thioredoxin-like superfamily ISU55_09325 IPR040079 Glutathione Transferase family ISU55_09330 IPR020317 Uncharacterised protein family YjbD ISU55_09335 IPR006977 Yip1 domain ISU55_09340 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A ISU55_09340 IPR005279 Dipeptide/tripeptide permease ISU55_09340 IPR036259 MFS transporter superfamily ISU55_09340 IPR000109 Proton-dependent oligopeptide transporter family ISU55_09340 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site ISU55_09345 IPR029032 AhpD-like ISU55_09350 IPR003593 AAA+ ATPase domain ISU55_09350 IPR003439 ABC transporter-like ISU55_09350 IPR017871 ABC transporter, conserved site ISU55_09350 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09355 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_09355 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09355 IPR003439 ABC transporter-like ISU55_09355 IPR003593 AAA+ ATPase domain ISU55_09360 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ISU55_09360 IPR035906 MetI-like superfamily ISU55_09360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_09365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_09365 IPR035906 MetI-like superfamily ISU55_09370 IPR000914 Solute-binding protein family 5 domain ISU55_09370 IPR039424 Solute-binding protein family 5 ISU55_09370 IPR030678 Peptide/nickel binding protein, MppA-type ISU55_09370 IPR023765 Solute-binding protein family 5, conserved site ISU55_09375 IPR002686 Transposase IS200-like ISU55_09375 IPR036515 Transposase IS200-like superfamily ISU55_09380 IPR003593 AAA+ ATPase domain ISU55_09380 IPR009057 Homeobox-like domain superfamily ISU55_09380 IPR025944 Sigma-54 interaction domain, conserved site ISU55_09380 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09380 IPR002078 RNA polymerase sigma factor 54 interaction domain ISU55_09380 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_09380 IPR014317 Transcription activator PspF ISU55_09380 IPR002197 DNA binding HTH domain, Fis-type ISU55_09385 IPR007157 PspA/IM30 ISU55_09385 IPR014319 Phage shock protein, PspA ISU55_09390 IPR009554 Phage shock protein B ISU55_09395 IPR007168 Phage shock protein, PspC, N-terminal ISU55_09395 IPR014320 Phage shock protein, PspC ISU55_09405 IPR007413 Protein of unknown function DUF463, YcjX-like protein ISU55_09410 IPR006507 Uncharacterised protein family UPF0283 ISU55_09410 IPR021147 Protein of unknown function DUF697 ISU55_09415 IPR014914 RES domain ISU55_09420 IPR011979 Conserved hypothetical protein CHP02293 ISU55_09420 IPR024467 Domain of unknown function DUF2384 ISU55_09425 IPR025944 Sigma-54 interaction domain, conserved site ISU55_09425 IPR035965 PAS domain superfamily ISU55_09425 IPR000014 PAS domain ISU55_09425 IPR002078 RNA polymerase sigma factor 54 interaction domain ISU55_09425 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ISU55_09425 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09425 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_09425 IPR030828 TyrR family, helix-turn-helix domain ISU55_09425 IPR009057 Homeobox-like domain superfamily ISU55_09425 IPR002912 ACT domain ISU55_09425 IPR003593 AAA+ ATPase domain ISU55_09435 IPR036397 Ribonuclease H superfamily ISU55_09435 IPR012337 Ribonuclease H-like superfamily ISU55_09435 IPR006120 Resolvase, HTH domain ISU55_09435 IPR017894 HTH domain, IS21 transposase-type ISU55_09435 IPR001584 Integrase, catalytic core ISU55_09440 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09440 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_09440 IPR001270 ClpA/B family ISU55_09440 IPR003593 AAA+ ATPase domain ISU55_09440 IPR002611 IstB-like ATP-binding protein ISU55_09445 IPR036515 Transposase IS200-like superfamily ISU55_09445 IPR002686 Transposase IS200-like ISU55_09450 IPR018219 Thiol peroxidase conserved site ISU55_09450 IPR036249 Thioredoxin-like superfamily ISU55_09450 IPR013766 Thioredoxin domain ISU55_09450 IPR002065 Thiol peroxidase Tpx ISU55_09450 IPR013740 Redoxin ISU55_09455 IPR036849 Enolase-like, C-terminal domain superfamily ISU55_09455 IPR029017 Enolase-like, N-terminal ISU55_09455 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site ISU55_09455 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ISU55_09455 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ISU55_09455 IPR029065 Enolase C-terminal domain-like ISU55_09455 IPR034603 Dipeptide epimerase ISU55_09460 IPR000834 Peptidase M14, carboxypeptidase A ISU55_09465 IPR030678 Peptide/nickel binding protein, MppA-type ISU55_09465 IPR039424 Solute-binding protein family 5 ISU55_09465 IPR000914 Solute-binding protein family 5 domain ISU55_09465 IPR023765 Solute-binding protein family 5, conserved site ISU55_09470 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB ISU55_09470 IPR023714 Zinc transport protein ZntB ISU55_09480 IPR013094 Alpha/beta hydrolase fold-3 ISU55_09480 IPR029058 Alpha/Beta hydrolase fold ISU55_09485 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type ISU55_09485 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal ISU55_09485 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase ISU55_09485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_09490 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain ISU55_09490 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ISU55_09490 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ISU55_09490 IPR011895 Pyruvate-flavodoxin oxidoreductase ISU55_09490 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain ISU55_09490 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain ISU55_09490 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily ISU55_09490 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II ISU55_09490 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_09490 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_09490 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal ISU55_09490 IPR029061 Thiamin diphosphate-binding fold ISU55_09495 IPR000390 Small multidrug resistance protein family ISU55_09500 IPR003416 MgtC/SapB/SrpB/YhiD family ISU55_09505 IPR005590 Protein of unknown function DUF333 ISU55_09510 IPR038670 HslJ-like superfamily ISU55_09510 IPR005184 Domain of unknown function DUF306, Meta/HslJ ISU55_09515 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ISU55_09515 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ISU55_09515 IPR036291 NAD(P)-binding domain superfamily ISU55_09515 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ISU55_09515 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU55_09520 IPR021730 Dicarboxylate transport ISU55_09525 IPR025985 YnbE-like lipoprotein ISU55_09530 IPR008309 Uncharacterised conserved protein UCP025560 ISU55_09535 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_09535 IPR036291 NAD(P)-binding domain superfamily ISU55_09535 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_09535 IPR013131 Mannitol dehydrogenase, N-terminal ISU55_09535 IPR013118 Mannitol dehydrogenase, C-terminal ISU55_09535 IPR000669 Mannitol dehydrogenase ISU55_09540 IPR037171 NagB/RpiA transferase-like ISU55_09540 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_09540 IPR007324 Sugar-binding domain, putative ISU55_09540 IPR012318 Crp-type HTH domain ISU55_09545 IPR003680 Flavodoxin-like fold ISU55_09545 IPR029039 Flavoprotein-like superfamily ISU55_09545 IPR023048 NADH-azoreductase, FMN-dependent ISU55_09550 IPR024590 RNA helicase HrpA, C-terminal ISU55_09550 IPR001650 Helicase, C-terminal ISU55_09550 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_09550 IPR010222 RNA helicase HrpA ISU55_09550 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09550 IPR011545 DEAD/DEAH box helicase domain ISU55_09550 IPR007502 Helicase-associated domain ISU55_09550 IPR003593 AAA+ ATPase domain ISU55_09550 IPR011709 Domain of unknown function DUF1605 ISU55_09565 IPR018114 Serine proteases, trypsin family, histidine active site ISU55_09565 IPR008256 Peptidase S1B ISU55_09565 IPR001254 Serine proteases, trypsin domain ISU55_09565 IPR033116 Serine proteases, trypsin family, serine active site ISU55_09565 IPR009003 Peptidase S1, PA clan ISU55_09595 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_09595 IPR003593 AAA+ ATPase domain ISU55_09595 IPR001270 ClpA/B family ISU55_09595 IPR002611 IstB-like ATP-binding protein ISU55_09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09600 IPR001584 Integrase, catalytic core ISU55_09600 IPR017894 HTH domain, IS21 transposase-type ISU55_09600 IPR006120 Resolvase, HTH domain ISU55_09600 IPR012337 Ribonuclease H-like superfamily ISU55_09600 IPR036397 Ribonuclease H superfamily ISU55_09605 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase ISU55_09605 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ISU55_09605 IPR016163 Aldehyde dehydrogenase, C-terminal ISU55_09605 IPR039697 Iron-type alcohol dehydrogenase-like ISU55_09605 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_09605 IPR016162 Aldehyde dehydrogenase, N-terminal ISU55_09605 IPR015590 Aldehyde dehydrogenase domain ISU55_09605 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain ISU55_09605 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ISU55_09610 IPR002771 Multiple antibiotic resistance (MarC)-related ISU55_09615 IPR023765 Solute-binding protein family 5, conserved site ISU55_09615 IPR039424 Solute-binding protein family 5 ISU55_09615 IPR030678 Peptide/nickel binding protein, MppA-type ISU55_09615 IPR000914 Solute-binding protein family 5 domain ISU55_09620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_09620 IPR035906 MetI-like superfamily ISU55_09625 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ISU55_09625 IPR035906 MetI-like superfamily ISU55_09625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_09630 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09630 IPR017871 ABC transporter, conserved site ISU55_09630 IPR003439 ABC transporter-like ISU55_09630 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_09630 IPR003593 AAA+ ATPase domain ISU55_09635 IPR003439 ABC transporter-like ISU55_09635 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09635 IPR003593 AAA+ ATPase domain ISU55_09635 IPR017871 ABC transporter, conserved site ISU55_09635 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_09645 IPR007376 dsDNA mimic, putative ISU55_09645 IPR036763 Putative dsDNA mimic superfamily ISU55_09650 IPR030840 Cardiolipin synthase A ISU55_09650 IPR027379 Cardiolipin synthase N-terminal ISU55_09650 IPR022924 Cardiolipin synthase ISU55_09650 IPR025202 Phospholipase D-like domain ISU55_09650 IPR001736 Phospholipase D/Transphosphatidylase ISU55_09665 IPR000758 Virulence-related outer membrane protein ISU55_09665 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_09665 IPR027385 Outer membrane protein beta-barrel domain ISU55_09680 IPR011008 Dimeric alpha-beta barrel ISU55_09680 IPR005545 YCII-related ISU55_09685 IPR003538 Gram-negative bacterial TonB protein ISU55_09685 IPR006260 TonB/TolA, C-terminal ISU55_09685 IPR037682 TonB, C-terminal ISU55_09690 IPR001207 Transposase, mutator type ISU55_09695 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase ISU55_09695 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain ISU55_09695 IPR029069 HotDog domain superfamily ISU55_09695 IPR006683 Thioesterase domain ISU55_09700 IPR006008 Intracellular septation protein A ISU55_09715 IPR009627 Uncharacterised protein family UPF0259 ISU55_09725 IPR005618 Outer membrane protein, OmpW ISU55_09725 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_09735 IPR002028 Tryptophan synthase, alpha chain ISU55_09735 IPR018204 Tryptophan synthase, alpha chain, active site ISU55_09735 IPR013785 Aldolase-type TIM barrel ISU55_09735 IPR011060 Ribulose-phosphate binding barrel ISU55_09740 IPR006654 Tryptophan synthase, beta chain ISU55_09740 IPR006653 Tryptophan synthase, beta chain, conserved site ISU55_09740 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_09740 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_09740 IPR023026 Tryptophan synthase beta chain/beta chain-like ISU55_09745 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) ISU55_09745 IPR011060 Ribulose-phosphate binding barrel ISU55_09745 IPR013785 Aldolase-type TIM barrel ISU55_09745 IPR013798 Indole-3-glycerol phosphate synthase ISU55_09745 IPR001468 Indole-3-glycerol phosphate synthase, conserved site ISU55_09750 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily ISU55_09750 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily ISU55_09750 IPR017459 Glycosyl transferase family 3, N-terminal domain ISU55_09750 IPR005940 Anthranilate phosphoribosyl transferase ISU55_09750 IPR000312 Glycosyl transferase, family 3 ISU55_09755 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain ISU55_09755 IPR017926 Glutamine amidotransferase ISU55_09755 IPR029062 Class I glutamine amidotransferase-like ISU55_09760 IPR015890 Chorismate-utilising enzyme, C-terminal ISU55_09760 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial ISU55_09760 IPR006805 Anthranilate synthase component I, N-terminal ISU55_09760 IPR005801 ADC synthase ISU55_09760 IPR019999 Anthranilate synthase component I-like ISU55_09770 IPR003141 Polymerase/histidinol phosphatase, N-terminal ISU55_09770 IPR016195 Polymerase/histidinol phosphatase-like ISU55_09770 IPR004013 PHP domain ISU55_09775 IPR006070 YrdC-like domain ISU55_09775 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ISU55_09780 IPR036986 RNA-binding S4 domain superfamily ISU55_09780 IPR002942 RNA-binding S4 domain ISU55_09780 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ISU55_09780 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ISU55_09780 IPR006145 Pseudouridine synthase, RsuA/RluA ISU55_09780 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_09785 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR ISU55_09785 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09790 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_09790 IPR036291 NAD(P)-binding domain superfamily ISU55_09790 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_09795 IPR013703 Peptidase S49, N-terminal proteobacteria ISU55_09795 IPR002142 Peptidase S49 ISU55_09795 IPR029045 ClpP/crotonase-like domain superfamily ISU55_09800 IPR038191 YciN superfamily ISU55_09800 IPR019633 Protein of unknown function DUF2498 ISU55_09810 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ISU55_09810 IPR023406 DNA topoisomerase, type IA, active site ISU55_09810 IPR013497 DNA topoisomerase, type IA, central ISU55_09810 IPR028612 DNA topoisomerase I, type IA ISU55_09810 IPR006171 TOPRIM domain ISU55_09810 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type ISU55_09810 IPR034149 DNA topoisomerase 1, TOPRIM domain ISU55_09810 IPR005733 DNA topoisomerase I, bacterial-type ISU55_09810 IPR000380 DNA topoisomerase, type IA ISU55_09810 IPR003601 DNA topoisomerase, type IA, domain 2 ISU55_09810 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ISU55_09810 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ISU55_09810 IPR023405 DNA topoisomerase, type IA, core domain ISU55_09810 IPR013498 DNA topoisomerase, type IA, zn finger ISU55_09810 IPR003602 DNA topoisomerase, type IA, DNA-binding domain ISU55_09815 IPR005119 LysR, substrate-binding ISU55_09815 IPR036390 Winged helix DNA-binding domain superfamily ISU55_09815 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_09815 IPR000847 Transcription regulator HTH, LysR ISU55_09825 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 ISU55_09825 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain ISU55_09825 IPR036008 Aconitase, iron-sulfur domain ISU55_09825 IPR018136 Aconitase family, 4Fe-4S cluster binding site ISU55_09825 IPR006249 Aconitase/Iron-responsive element-binding protein 2 ISU55_09825 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain ISU55_09825 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ISU55_09830 IPR032677 GTP cyclohydrolase II ISU55_09830 IPR000926 GTP cyclohydrolase II, RibA ISU55_09830 IPR036144 RibA-like superfamily ISU55_09835 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ISU55_09835 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ISU55_09840 IPR010445 Lipopolysaccharide assembly protein A domain ISU55_09840 IPR032906 Lipopolysaccharide assembly protein A ISU55_09845 IPR030865 Lipopolysaccharide assembly protein B ISU55_09845 IPR041166 LapB, rubredoxin metal binding domain ISU55_09845 IPR013026 Tetratricopeptide repeat-containing domain ISU55_09845 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_09845 IPR019734 Tetratricopeptide repeat ISU55_09855 IPR018089 Orotidine 5'-phosphate decarboxylase, active site ISU55_09855 IPR014732 Orotidine 5'-phosphate decarboxylase ISU55_09855 IPR013785 Aldolase-type TIM barrel ISU55_09855 IPR001754 Orotidine 5'-phosphate decarboxylase domain ISU55_09855 IPR011060 Ribulose-phosphate binding barrel ISU55_09860 IPR036877 SUI1 domain superfamily ISU55_09860 IPR005872 Archaeal/bacterial translation initiation factor SUI1 ISU55_09860 IPR001950 SUI1 domain ISU55_09865 IPR008816 Glycine zipper 2TM domain ISU55_09870 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ISU55_09870 IPR004661 L-ribulose-5-phosphate 4-epimerase ISU55_09870 IPR001303 Class II aldolase/adducin N-terminal ISU55_09870 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD ISU55_09880 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase ISU55_09880 IPR023001 Fructose-6-phosphate aldolase ISU55_09880 IPR001585 Transaldolase/Fructose-6-phosphate aldolase ISU55_09880 IPR018225 Transaldolase, active site ISU55_09880 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial ISU55_09880 IPR013785 Aldolase-type TIM barrel ISU55_09885 IPR007423 Selenoprotein, putative ISU55_09890 IPR025299 CstA, C-terminal domain ISU55_09890 IPR003706 CstA, N-terminal domain ISU55_09895 IPR011129 Cold shock domain ISU55_09895 IPR040476 RNase II/RNase R, cold shock domain ISU55_09895 IPR012340 Nucleic acid-binding, OB-fold ISU55_09895 IPR011804 Ribonuclease II ISU55_09895 IPR013223 Ribonuclease B, N-terminal OB domain ISU55_09895 IPR001900 Ribonuclease II/R ISU55_09895 IPR003029 S1 domain ISU55_09895 IPR004476 Ribonuclease II/ribonuclease R ISU55_09895 IPR022966 Ribonuclease II/R, conserved site ISU55_09900 IPR011701 Major facilitator superfamily ISU55_09900 IPR020846 Major facilitator superfamily domain ISU55_09900 IPR036259 MFS transporter superfamily ISU55_09905 IPR001509 NAD-dependent epimerase/dehydratase ISU55_09905 IPR036291 NAD(P)-binding domain superfamily ISU55_09910 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif ISU55_09910 IPR004036 Endonuclease III-like, conserved site-2 ISU55_09910 IPR011257 DNA glycosylase ISU55_09910 IPR004035 Endonuclease III, iron-sulphur binding site ISU55_09910 IPR003265 HhH-GPD domain ISU55_09910 IPR000445 Helix-hairpin-helix motif ISU55_09910 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ISU55_09910 IPR005759 Endonuclease III ISU55_09915 IPR010968 Ion-translocating oxidoreductase complex subunit E ISU55_09915 IPR003667 NqrDE/RnfAE ISU55_09920 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG ISU55_09920 IPR007329 FMN-binding ISU55_09925 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD ISU55_09925 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D ISU55_09930 IPR018060 DNA binding HTH domain, AraC-type ISU55_09930 IPR009057 Homeobox-like domain superfamily ISU55_09930 IPR029442 GyrI-like small molecule binding domain ISU55_09930 IPR020449 Transcription regulator HTH, AraC- type ISU55_09930 IPR010499 Bacterial transcription activator, effector binding ISU55_09930 IPR018062 HTH domain AraC-type, conserved site ISU55_09930 IPR011256 Regulatory factor, effector binding domain superfamily ISU55_09935 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC ISU55_09935 IPR009051 Alpha-helical ferredoxin ISU55_09935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_09935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_09935 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain ISU55_09935 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily ISU55_09935 IPR026902 RnfC Barrel sandwich hybrid domain ISU55_09935 IPR019554 Soluble ligand binding domain ISU55_09940 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria ISU55_09940 IPR007202 4Fe-4S domain ISU55_09940 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_09940 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB ISU55_09940 IPR011005 Dihydropteroate synthase-like ISU55_09940 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_09945 IPR003667 NqrDE/RnfAE ISU55_09945 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA ISU55_09950 IPR019690 Protein of unknown function DUF2569 ISU55_09955 IPR010132 ATPase, type I secretion system, HlyB ISU55_09955 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09955 IPR003439 ABC transporter-like ISU55_09955 IPR005074 Peptidase C39, bacteriocin processing ISU55_09955 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_09955 IPR039395 Peptidase C39-like A ISU55_09955 IPR039421 Type I protein exporter ISU55_09955 IPR011527 ABC transporter type 1, transmembrane domain ISU55_09955 IPR017871 ABC transporter, conserved site ISU55_09955 IPR003593 AAA+ ATPase domain ISU55_09960 IPR011527 ABC transporter type 1, transmembrane domain ISU55_09960 IPR039421 Type I protein exporter ISU55_09960 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09960 IPR011917 ABC transporter, lipid A export, MsbA ISU55_09960 IPR017871 ABC transporter, conserved site ISU55_09960 IPR003439 ABC transporter-like ISU55_09960 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_09960 IPR003593 AAA+ ATPase domain ISU55_09965 IPR010129 Type I secretion membrane fusion protein, HlyD family ISU55_09965 IPR006144 Secretion protein HlyD, conserved site ISU55_09965 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ISU55_09970 IPR006144 Secretion protein HlyD, conserved site ISU55_09970 IPR010129 Type I secretion membrane fusion protein, HlyD family ISU55_09975 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09975 IPR005074 Peptidase C39, bacteriocin processing ISU55_09975 IPR039395 Peptidase C39-like A ISU55_09975 IPR011527 ABC transporter type 1, transmembrane domain ISU55_09975 IPR003439 ABC transporter-like ISU55_09975 IPR003593 AAA+ ATPase domain ISU55_09975 IPR039421 Type I protein exporter ISU55_09975 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_09975 IPR010132 ATPase, type I secretion system, HlyB ISU55_09975 IPR017871 ABC transporter, conserved site ISU55_09980 IPR038583 L-arabinose isomerase, N-terminal domain superfamily ISU55_09980 IPR024664 L-arabinose isomerase, C-terminal ISU55_09980 IPR004216 L-fucose/L-arabinose isomerase, C-terminal ISU55_09980 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily ISU55_09980 IPR003762 L-arabinose isomerase ISU55_09985 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_09985 IPR005929 Ribulokinase ISU55_09990 IPR028082 Periplasmic binding protein-like I ISU55_09990 IPR001761 Periplasmic binding protein/LacI sugar binding domain ISU55_09990 IPR026266 L-arabinose-binding periplasmic protein ISU55_09995 IPR003439 ABC transporter-like ISU55_09995 IPR003593 AAA+ ATPase domain ISU55_09995 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_09995 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG ISU55_09995 IPR017871 ABC transporter, conserved site ISU55_10000 IPR001851 ABC transporter, permease ISU55_10005 IPR020449 Transcription regulator HTH, AraC- type ISU55_10005 IPR018062 HTH domain AraC-type, conserved site ISU55_10005 IPR018060 DNA binding HTH domain, AraC-type ISU55_10005 IPR009057 Homeobox-like domain superfamily ISU55_10005 IPR003313 AraC-type arabinose-binding/dimerisation domain ISU55_10005 IPR037923 Transcription regulator HTH-like ISU55_10010 IPR000683 Oxidoreductase, N-terminal ISU55_10010 IPR036291 NAD(P)-binding domain superfamily ISU55_10010 IPR004104 Oxidoreductase, C-terminal ISU55_10015 IPR038770 Sodium/solute symporter superfamily ISU55_10015 IPR016833 Putative sodium bile acid cotransporter ISU55_10025 IPR010352 Protein of unknown function DUF945 ISU55_10030 IPR016305 Mannose-6-phosphate isomerase ISU55_10030 IPR001250 Mannose-6-phosphate isomerase, type I ISU55_10030 IPR018050 Phosphomannose isomerase, type I, conserved site ISU55_10030 IPR014710 RmlC-like jelly roll fold ISU55_10030 IPR011051 RmlC-like cupin domain superfamily ISU55_10035 IPR005677 Fumarate hydratase, class II ISU55_10035 IPR020557 Fumarate lyase, conserved site ISU55_10035 IPR022761 Fumarate lyase, N-terminal ISU55_10035 IPR000362 Fumarate lyase family ISU55_10035 IPR018951 Fumarase C, C-terminal ISU55_10035 IPR024083 Fumarase/histidase, N-terminal ISU55_10035 IPR008948 L-Aspartase-like ISU55_10040 IPR008865 DNA replication terminus site-binding protein ISU55_10040 IPR036381 Replication terminator Tus, domain 1 ISU55_10040 IPR036384 Replication terminator Tus superfamily ISU55_10045 IPR020846 Major facilitator superfamily domain ISU55_10045 IPR011701 Major facilitator superfamily ISU55_10045 IPR036259 MFS transporter superfamily ISU55_10045 IPR005829 Sugar transporter, conserved site ISU55_10050 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10050 IPR005119 LysR, substrate-binding ISU55_10050 IPR000847 Transcription regulator HTH, LysR ISU55_10050 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10055 IPR000600 ROK family ISU55_10055 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10055 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10060 IPR004472 Dethiobiotin synthase BioD ISU55_10060 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10065 IPR023790 Chloride channel, voltage-gated, ClcB ISU55_10065 IPR001807 Chloride channel, voltage gated ISU55_10065 IPR014743 Chloride channel, core ISU55_10070 IPR028082 Periplasmic binding protein-like I ISU55_10070 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_10070 IPR000843 LacI-type HTH domain ISU55_10085 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_10085 IPR015168 SsuA/THI5-like ISU55_10085 IPR010067 Aliphatic sulfonates-binding protein ISU55_10090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_10090 IPR035906 MetI-like superfamily ISU55_10095 IPR003593 AAA+ ATPase domain ISU55_10095 IPR003439 ABC transporter-like ISU55_10095 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10100 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily ISU55_10100 IPR018953 AMP nucleoside phosphorylase, N-terminal ISU55_10100 IPR000845 Nucleoside phosphorylase domain ISU55_10100 IPR035994 Nucleoside phosphorylase superfamily ISU55_10100 IPR011271 AMP nucleosidase ISU55_10130 IPR012846 Acetolactate synthase, large subunit, biosynthetic ISU55_10130 IPR039368 Acetolactate synthase large subunit, TPP binding domain ISU55_10130 IPR012000 Thiamine pyrophosphate enzyme, central domain ISU55_10130 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ISU55_10130 IPR000399 TPP-binding enzyme, conserved site ISU55_10130 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ISU55_10130 IPR029061 Thiamin diphosphate-binding fold ISU55_10130 IPR029035 DHS-like NAD/FAD-binding domain superfamily ISU55_10135 IPR039557 AHAS, ACT domain ISU55_10135 IPR002912 ACT domain ISU55_10135 IPR004789 Acetolactate synthase, small subunit ISU55_10140 IPR006439 HAD hydrolase, subfamily IA ISU55_10140 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB ISU55_10140 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ISU55_10140 IPR036412 HAD-like superfamily ISU55_10140 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_10140 IPR023214 HAD superfamily ISU55_10150 IPR001952 Alkaline phosphatase ISU55_10150 IPR018299 Alkaline phosphatase, active site ISU55_10150 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_10155 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ISU55_10155 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain ISU55_10155 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ISU55_10155 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site ISU55_10155 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ISU55_10155 IPR023546 Methylated-DNA--protein-cysteine methyltransferase ISU55_10155 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10160 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10160 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10160 IPR018335 Transcription regulator HTH, Crp-type, conserved site ISU55_10160 IPR014710 RmlC-like jelly roll fold ISU55_10160 IPR012318 Crp-type HTH domain ISU55_10160 IPR000595 Cyclic nucleotide-binding domain ISU55_10160 IPR018490 Cyclic nucleotide-binding-like ISU55_10165 IPR006016 UspA ISU55_10170 IPR029035 DHS-like NAD/FAD-binding domain superfamily ISU55_10170 IPR012136 NADP transhydrogenase, beta subunit ISU55_10170 IPR034300 NADP transhydrogenase beta-like domain ISU55_10175 IPR026255 NAD(P) transhydrogenase, alpha subunit ISU55_10175 IPR036291 NAD(P)-binding domain superfamily ISU55_10175 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ISU55_10175 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ISU55_10175 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 ISU55_10175 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 ISU55_10175 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal ISU55_10180 IPR025539 YdgH protein ISU55_10180 IPR036275 YdgH-like superfamily ISU55_10180 IPR025543 Dodecin-like ISU55_10180 IPR010854 Domain of unknown function DUF1471 ISU55_10185 IPR004754 Amino acid antiporter ISU55_10185 IPR002293 Amino acid/polyamine transporter I ISU55_10195 IPR001789 Signal transduction response regulator, receiver domain ISU55_10195 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10195 IPR011006 CheY-like superfamily ISU55_10195 IPR039420 Transcriptional regulatory protein WalR-like ISU55_10195 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_10195 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_10200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_10200 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_10200 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_10200 IPR005467 Histidine kinase domain ISU55_10200 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_10200 IPR003660 HAMP domain ISU55_10200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_10205 IPR001333 Peptidase M32, carboxypeptidase Taq ISU55_10210 IPR002686 Transposase IS200-like ISU55_10210 IPR036515 Transposase IS200-like superfamily ISU55_10215 IPR036397 Ribonuclease H superfamily ISU55_10215 IPR012337 Ribonuclease H-like superfamily ISU55_10215 IPR006120 Resolvase, HTH domain ISU55_10215 IPR017894 HTH domain, IS21 transposase-type ISU55_10215 IPR001584 Integrase, catalytic core ISU55_10220 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_10220 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10220 IPR001270 ClpA/B family ISU55_10220 IPR002611 IstB-like ATP-binding protein ISU55_10220 IPR003593 AAA+ ATPase domain ISU55_10225 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10225 IPR001267 Thymidine kinase ISU55_10225 IPR020633 Thymidine kinase, conserved site ISU55_10230 IPR027454 Histone-like protein H-NS, N-terminal ISU55_10230 IPR001801 Histone-like protein H-NS ISU55_10230 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily ISU55_10230 IPR027444 Histone-like protein H-NS, C-terminal domain ISU55_10235 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily ISU55_10235 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation ISU55_10235 IPR036291 NAD(P)-binding domain superfamily ISU55_10235 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal ISU55_10235 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type ISU55_10235 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_10235 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal ISU55_10235 IPR017476 UDP-glucose/GDP-mannose dehydrogenase ISU55_10240 IPR011006 CheY-like superfamily ISU55_10240 IPR001789 Signal transduction response regulator, receiver domain ISU55_10240 IPR036457 PPM-type phosphatase domain superfamily ISU55_10240 IPR028616 Regulator of RpoS ISU55_10240 IPR039420 Transcriptional regulatory protein WalR-like ISU55_10245 IPR023006 Uncharacterised protein family UPF0225 ISU55_10245 IPR004027 SEC-C motif ISU55_10245 IPR032710 NTF2-like domain superfamily ISU55_10250 IPR036477 Formyl transferase, N-terminal domain superfamily ISU55_10250 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain ISU55_10250 IPR004810 Formyltetrahydrofolate deformylase ISU55_10250 IPR002912 ACT domain ISU55_10250 IPR002376 Formyl transferase, N-terminal ISU55_10255 IPR001207 Transposase, mutator type ISU55_10275 IPR005119 LysR, substrate-binding ISU55_10275 IPR000847 Transcription regulator HTH, LysR ISU55_10275 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10275 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10280 IPR004808 AP endonuclease 1 ISU55_10280 IPR020848 AP endonuclease 1, conserved site ISU55_10280 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ISU55_10280 IPR005135 Endonuclease/exonuclease/phosphatase ISU55_10280 IPR037493 Exodeoxyribonuclease III-like ISU55_10280 IPR020847 AP endonuclease 1, binding site ISU55_10285 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_10285 IPR020476 NUDIX hydrolase ISU55_10285 IPR020084 NUDIX hydrolase, conserved site ISU55_10285 IPR000086 NUDIX hydrolase domain ISU55_10290 IPR009971 Protein of unknown function DUF1496 ISU55_10295 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ISU55_10295 IPR000380 DNA topoisomerase, type IA ISU55_10295 IPR003601 DNA topoisomerase, type IA, domain 2 ISU55_10295 IPR023406 DNA topoisomerase, type IA, active site ISU55_10295 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ISU55_10295 IPR023405 DNA topoisomerase, type IA, core domain ISU55_10295 IPR003602 DNA topoisomerase, type IA, DNA-binding domain ISU55_10295 IPR034144 DNA topoisomerase 3-like, TOPRIM domain ISU55_10295 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ISU55_10295 IPR013497 DNA topoisomerase, type IA, central ISU55_10295 IPR005738 DNA topoisomerase III ISU55_10295 IPR006171 TOPRIM domain ISU55_10300 IPR016188 PurM-like, N-terminal domain ISU55_10300 IPR023061 Selenophosphate synthetase, class I ISU55_10300 IPR036676 PurM-like, C-terminal domain superfamily ISU55_10300 IPR010918 PurM-like, C-terminal domain ISU55_10300 IPR004536 Selenophosphate synthetase ISU55_10300 IPR036921 PurM-like, N-terminal domain superfamily ISU55_10305 IPR029479 Nitroreductase ISU55_10305 IPR000415 Nitroreductase-like ISU55_10305 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ISU55_10310 IPR002142 Peptidase S49 ISU55_10310 IPR004634 Peptidase S49, protease IV ISU55_10310 IPR033854 Signal peptide peptidase A ISU55_10310 IPR004635 Peptidase S49, SppA ISU55_10310 IPR029045 ClpP/crotonase-like domain superfamily ISU55_10315 IPR027474 L-asparaginase, N-terminal ISU55_10315 IPR041725 Type I (cytosolic) L-asparaginase ISU55_10315 IPR027473 L-asparaginase, C-terminal ISU55_10315 IPR027475 Asparaginase/glutaminase, active site 2 ISU55_10315 IPR040919 Asparaginase/glutaminase, C-terminal ISU55_10315 IPR037152 L-asparaginase, N-terminal domain superfamily ISU55_10315 IPR006033 Type I L-asparaginase family ISU55_10315 IPR020827 Asparaginase/glutaminase, active site 1 ISU55_10315 IPR006034 Asparaginase/glutaminase-like ISU55_10315 IPR036152 Asparaginase/glutaminase-like superfamily ISU55_10320 IPR036380 Isochorismatase-like superfamily ISU55_10320 IPR000868 Isochorismatase-like ISU55_10325 IPR009749 Protein of unknown function DUF1315 ISU55_10330 IPR028427 Peptide methionine sulfoxide reductase ISU55_10330 IPR011057 Mss4-like superfamily ISU55_10330 IPR002579 Peptide methionine sulphoxide reductase MrsB ISU55_10335 IPR036291 NAD(P)-binding domain superfamily ISU55_10335 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I ISU55_10335 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain ISU55_10335 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain ISU55_10335 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site ISU55_10335 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family ISU55_10340 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase ISU55_10340 IPR025532 Glucose-6-phosphate 1-epimerase ISU55_10340 IPR011013 Galactose mutarotase-like domain superfamily ISU55_10340 IPR014718 Glycoside hydrolase-type carbohydrate-binding ISU55_10345 IPR010583 MltA-interacting MipA ISU55_10350 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10350 IPR013153 PrkA AAA domain ISU55_10350 IPR010650 PrkA C-terminal domain ISU55_10350 IPR016230 Serine-protein kinase, PrkA ISU55_10355 IPR006698 Uncharacterised protein family UPF0229 ISU55_10365 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10365 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10365 IPR005119 LysR, substrate-binding ISU55_10365 IPR000847 Transcription regulator HTH, LysR ISU55_10370 IPR012093 Pirin ISU55_10370 IPR003829 Pirin, N-terminal domain ISU55_10370 IPR011051 RmlC-like cupin domain superfamily ISU55_10370 IPR014710 RmlC-like jelly roll fold ISU55_10370 IPR008778 Pirin, C-terminal domain ISU55_10375 IPR023697 Multidrug resistance protein MdtL ISU55_10375 IPR036259 MFS transporter superfamily ISU55_10375 IPR020846 Major facilitator superfamily domain ISU55_10375 IPR011701 Major facilitator superfamily ISU55_10380 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_10380 IPR006076 FAD dependent oxidoreductase ISU55_10380 IPR023080 D-amino acid dehydrogenase DadA ISU55_10385 IPR007390 Sporulation stage V, protein R ISU55_10390 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10390 IPR028374 FadR, C-terminal domain ISU55_10390 IPR008920 Transcription regulator FadR/GntR, C-terminal ISU55_10390 IPR000524 Transcription regulator HTH, GntR ISU55_10390 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10390 IPR014178 Fatty acid response transcription factor FadR ISU55_10395 IPR004671 Na+/H+ antiporter NhaB ISU55_10400 IPR003752 Disulphide bond formation protein DsbB/BdbC ISU55_10400 IPR022920 Disulphide bond formation protein DsbB ISU55_10400 IPR023380 DsbB-like superfamily ISU55_10415 IPR016454 Cysteine desulfurase ISU55_10415 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_10415 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_10415 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_10415 IPR000192 Aminotransferase class V domain ISU55_10415 IPR010240 Cysteine desulfurase IscS ISU55_10415 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ISU55_10425 IPR001207 Transposase, mutator type ISU55_10430 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly ISU55_10585 IPR001207 Transposase, mutator type ISU55_10650 IPR010534 Bacteriophage 933W, GpQ ISU55_10660 IPR008711 Recombinase NinB ISU55_10660 IPR036619 NinB superfamily ISU55_10675 IPR003593 AAA+ ATPase domain ISU55_10675 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10675 IPR002611 IstB-like ATP-binding protein ISU55_10675 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_10675 IPR001270 ClpA/B family ISU55_10680 IPR017894 HTH domain, IS21 transposase-type ISU55_10680 IPR001584 Integrase, catalytic core ISU55_10680 IPR006120 Resolvase, HTH domain ISU55_10680 IPR012337 Ribonuclease H-like superfamily ISU55_10680 IPR036397 Ribonuclease H superfamily ISU55_10685 IPR013762 Integrase-like, catalytic domain superfamily ISU55_10685 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_10685 IPR002104 Integrase, catalytic domain ISU55_10685 IPR010998 Integrase/recombinase, N-terminal ISU55_10685 IPR022000 Min27-like integrase, DNA-binding domain ISU55_10690 IPR008228 Uncharacterised conserved protein UCP006173 ISU55_10690 IPR005358 Putative zinc- or iron-chelating domain containing protein ISU55_10695 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ISU55_10695 IPR011234 Fumarylacetoacetase-like, C-terminal ISU55_10700 IPR031304 Transglycosylase SLT domain 2 ISU55_10700 IPR011757 Lytic transglycosylase MltB ISU55_10700 IPR023346 Lysozyme-like domain superfamily ISU55_10705 IPR027354 YcgL domain ISU55_10705 IPR038068 YcgL-like superfamily ISU55_10710 IPR005526 Septum formation inhibitor MinC, C-terminal ISU55_10710 IPR013033 Septum formation inhibitor MinC ISU55_10710 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily ISU55_10710 IPR007874 Septum formation inhibitor MinC, N-terminal ISU55_10710 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily ISU55_10710 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal ISU55_10715 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ISU55_10715 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10715 IPR025501 ATP binding protein MinD ISU55_10715 IPR010223 ATP binding protein MinD, bacterial-type ISU55_10720 IPR005527 Cell division topological specificity factor MinE ISU55_10720 IPR036707 Cell division topological specificity factor MinE superfamily ISU55_10725 IPR006292 Ribonuclease D ISU55_10725 IPR012337 Ribonuclease H-like superfamily ISU55_10725 IPR036397 Ribonuclease H superfamily ISU55_10725 IPR002562 3'-5' exonuclease domain ISU55_10725 IPR010997 HRDC-like superfamily ISU55_10725 IPR002121 HRDC domain ISU55_10730 IPR025110 AMP-binding enzyme, C-terminal domain ISU55_10730 IPR000873 AMP-dependent synthetase/ligase ISU55_10730 IPR042099 AMP-dependent synthetase-like superfamily ISU55_10730 IPR020845 AMP-binding, conserved site ISU55_10740 IPR004658 Outer membrane lipoprotein Slp ISU55_10745 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB ISU55_10745 IPR000905 Gcp-like domain ISU55_10750 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type ISU55_10750 IPR006935 Helicase/UvrB, N-terminal ISU55_10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10750 IPR006555 ATP-dependent helicase, C-terminal ISU55_10750 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_10755 IPR006175 YjgF/YER057c/UK114 family ISU55_10755 IPR035709 RutC family, YoaB-like ISU55_10755 IPR019897 RidA, conserved site ISU55_10755 IPR035959 RutC-like superfamily ISU55_10760 IPR023737 Spermidine export protein MdtI ISU55_10760 IPR000390 Small multidrug resistance protein family ISU55_10765 IPR023740 Spermidine export protein MdtJ ISU55_10765 IPR000390 Small multidrug resistance protein family ISU55_10770 IPR031338 KDPG/KHG aldolase, active site 2 ISU55_10770 IPR013785 Aldolase-type TIM barrel ISU55_10770 IPR000887 KDPG/KHG aldolase ISU55_10770 IPR031337 KDPG/KHG aldolase, active site 1 ISU55_10775 IPR036291 NAD(P)-binding domain superfamily ISU55_10775 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding ISU55_10775 IPR019796 Glucose-6-phosphate dehydrogenase, active site ISU55_10775 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal ISU55_10775 IPR001282 Glucose-6-phosphate dehydrogenase ISU55_10780 IPR035472 RpiR-like, SIS domain ISU55_10780 IPR000281 Helix-turn-helix protein RpiR ISU55_10780 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10780 IPR001347 Sugar isomerase (SIS) ISU55_10780 IPR009057 Homeobox-like domain superfamily ISU55_10785 IPR040442 Pyruvate kinase-like domain superfamily ISU55_10785 IPR018209 Pyruvate kinase, active site ISU55_10785 IPR011037 Pyruvate kinase-like, insert domain superfamily ISU55_10785 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_10785 IPR001697 Pyruvate kinase ISU55_10785 IPR015793 Pyruvate kinase, barrel ISU55_10785 IPR015806 Pyruvate kinase, insert domain superfamily ISU55_10785 IPR036918 Pyruvate kinase, C-terminal domain superfamily ISU55_10785 IPR015795 Pyruvate kinase, C-terminal ISU55_10795 IPR011921 Lipid A biosynthesis myristoyltransferase ISU55_10795 IPR004960 Bacterial lipid A biosynthesis acyltransferase ISU55_10800 IPR018392 LysM domain ISU55_10800 IPR011055 Duplicated hybrid motif ISU55_10800 IPR013731 Opacity-associated protein A, N-terminal ISU55_10800 IPR016047 Peptidase M23 ISU55_10805 IPR035520 High-affinity zinc uptake system protein ZnuA ISU55_10805 IPR006127 Periplasmic solute binding protein, ZnuA-like ISU55_10810 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10810 IPR003593 AAA+ ATPase domain ISU55_10810 IPR003439 ABC transporter-like ISU55_10810 IPR017882 Zinc import ATP-binding protein ZnuC ISU55_10815 IPR001626 ABC transporter, TroCD-like ISU55_10815 IPR037294 ABC transporter, BtuC-like ISU55_10820 IPR041445 RuvB, AAA lid domain ISU55_10820 IPR004605 DNA helicase, Holliday junction RuvB-type ISU55_10820 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10820 IPR008824 RuvB-like P-loop domain ISU55_10820 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10820 IPR003593 AAA+ ATPase domain ISU55_10820 IPR008823 RuvB C-terminal winged helix domain ISU55_10820 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10825 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ISU55_10825 IPR012340 Nucleic acid-binding, OB-fold ISU55_10825 IPR000085 Bacterial DNA recombination protein RuvA ISU55_10825 IPR010994 RuvA domain 2-like ISU55_10825 IPR011114 Holliday junction DNA helicase RuvA, C-terminal ISU55_10825 IPR036267 RuvA, C-terminal domain superfamily ISU55_10825 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial ISU55_10830 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site ISU55_10830 IPR036397 Ribonuclease H superfamily ISU55_10830 IPR012337 Ribonuclease H-like superfamily ISU55_10830 IPR002176 Crossover junction endodeoxyribonuclease RuvC ISU55_10835 IPR026564 Transcriptional regulator TACO1-like, domain 3 ISU55_10835 IPR002876 Transcriptional regulator TACO1-like ISU55_10835 IPR029072 YebC-like ISU55_10835 IPR017856 Integrase-like, N-terminal ISU55_10840 IPR003564 Dihydroneopterin triphosphate diphosphatase ISU55_10840 IPR000086 NUDIX hydrolase domain ISU55_10840 IPR020084 NUDIX hydrolase, conserved site ISU55_10840 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_10845 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_10845 IPR012340 Nucleic acid-binding, OB-fold ISU55_10845 IPR029351 GAD domain ISU55_10845 IPR004524 Aspartate-tRNA ligase, type 1 ISU55_10845 IPR004115 GAD-like domain superfamily ISU55_10845 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ISU55_10845 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ISU55_10845 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb ISU55_10850 IPR036520 UPF0759 superfamily ISU55_10850 IPR002763 Protein of unknown function DUF72 ISU55_10855 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein ISU55_10855 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily ISU55_10860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_10860 IPR041698 Methyltransferase domain 25 ISU55_10860 IPR005271 Carboxy-S-adenosyl-L-methionine synthase ISU55_10865 IPR010017 tRNA U34 carboxymethyltransferase ISU55_10865 IPR027555 tRNA (mo5U34)-methyltransferase-like ISU55_10865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_10870 IPR036822 Copper homeostasis (CutC) domain superfamily ISU55_10870 IPR023648 Copper homeostasis CutC domain ISU55_10870 IPR005627 Copper homeostasis protein CutC ISU55_10875 IPR010393 Protein of unknown function DUF991 ISU55_10875 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ISU55_10880 IPR008909 DALR anticodon binding ISU55_10880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_10880 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ISU55_10880 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily ISU55_10880 IPR035684 Arginyl-tRNA synthetase, catalytic core domain ISU55_10880 IPR005148 Arginyl tRNA synthetase N-terminal domain ISU55_10880 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_10880 IPR001278 Arginine-tRNA ligase ISU55_10885 IPR012334 Pectin lyase fold ISU55_10885 IPR011050 Pectin lyase fold/virulence factor ISU55_10885 IPR008638 Filamentous haemagglutinin, N-terminal ISU55_10885 IPR025157 Hemagglutinin repeat ISU55_10890 IPR035251 ShlB, POTRA domain ISU55_10890 IPR005565 Haemolysin activator HlyB, C-terminal ISU55_10890 IPR013686 Polypeptide-transport-associated, ShlB-type ISU55_10890 IPR034746 POTRA domain ISU55_10890 IPR027282 Two partner secretion pathway transporter ISU55_10895 IPR004268 Peptidoglycan biosynthesis protein MurJ ISU55_10900 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10900 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10900 IPR007432 Protein of unknown function DUF480 ISU55_10905 IPR000182 GNAT domain ISU55_10905 IPR016181 Acyl-CoA N-acyltransferase ISU55_10910 IPR020846 Major facilitator superfamily domain ISU55_10910 IPR036259 MFS transporter superfamily ISU55_10910 IPR022855 Multidrug resistance protein MdtH ISU55_10910 IPR011701 Major facilitator superfamily ISU55_10915 IPR010835 Protein of unknown function DUF1439 ISU55_10920 IPR036411 TorD-like superfamily ISU55_10920 IPR020945 DMSO/Nitrate reductase chaperone ISU55_10920 IPR026269 Tat proofreading chaperone DmsD-type ISU55_10925 IPR003141 Polymerase/histidinol phosphatase, N-terminal ISU55_10925 IPR004013 PHP domain ISU55_10925 IPR023710 Probable phosphatase YcdX ISU55_10925 IPR016195 Polymerase/histidinol phosphatase-like ISU55_10935 IPR000600 ROK family ISU55_10935 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_10935 IPR022687 DTXR-type HTH domain ISU55_10935 IPR036390 Winged helix DNA-binding domain superfamily ISU55_10940 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ISU55_10940 IPR030395 Glycerophosphodiester phosphodiesterase domain ISU55_10950 IPR002686 Transposase IS200-like ISU55_10950 IPR036515 Transposase IS200-like superfamily ISU55_10955 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_10955 IPR003593 AAA+ ATPase domain ISU55_10955 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA ISU55_10955 IPR003439 ABC transporter-like ISU55_10955 IPR017871 ABC transporter, conserved site ISU55_10955 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_10955 IPR013611 Transport-associated OB, type 2 ISU55_10955 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit ISU55_10960 IPR035906 MetI-like superfamily ISU55_10960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_10965 IPR035906 MetI-like superfamily ISU55_10965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_10975 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ISU55_10975 IPR030395 Glycerophosphodiester phosphodiesterase domain ISU55_10985 IPR002645 STAS domain ISU55_10985 IPR036513 STAS domain superfamily ISU55_10985 IPR001902 SLC26A/SulP transporter ISU55_10985 IPR018045 Sulphate anion transporter, conserved site ISU55_10985 IPR011547 SLC26A/SulP transporter domain ISU55_10990 IPR013785 Aldolase-type TIM barrel ISU55_10990 IPR006269 3-deoxy-8-phosphooctulonate synthase ISU55_10990 IPR006218 DAHP synthetase I/KDSA ISU55_10995 IPR032698 Protein SirB1, N-terminal ISU55_11000 IPR007360 Invasion gene expression up-regulator, SirB ISU55_11005 IPR025714 Methyltransferase domain ISU55_11005 IPR004556 Methyltransferase HemK-like ISU55_11005 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_11005 IPR040758 Release factor glutamine methyltransferase, N-terminal domain ISU55_11005 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific ISU55_11005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_11010 IPR004373 Peptide chain release factor 1 ISU55_11010 IPR005139 Peptide chain release factor ISU55_11010 IPR000352 Peptide chain release factor class I ISU55_11015 IPR018214 Glutamyl-tRNA reductase, conserved site ISU55_11015 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal ISU55_11015 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain ISU55_11015 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase ISU55_11015 IPR036291 NAD(P)-binding domain superfamily ISU55_11015 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ISU55_11015 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily ISU55_11015 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily ISU55_11020 IPR004565 Outer membrane lipoprotein LolB ISU55_11020 IPR029046 Lipoprotein localisation LolA/LolB/LppX ISU55_11025 IPR036554 GHMP kinase, C-terminal domain superfamily ISU55_11025 IPR006204 GHMP kinase N-terminal domain ISU55_11025 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ISU55_11025 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_11025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_11025 IPR013750 GHMP kinase, C-terminal domain ISU55_11030 IPR000836 Phosphoribosyltransferase domain ISU55_11030 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type ISU55_11030 IPR005946 Ribose-phosphate pyrophosphokinase ISU55_11030 IPR029057 Phosphoribosyltransferase-like ISU55_11030 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain ISU55_11030 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site ISU55_11035 IPR019698 Protein of unknown function DUF2583 ISU55_11040 IPR036416 Peptidyl-tRNA hydrolase superfamily ISU55_11040 IPR018171 Peptidyl-tRNA hydrolase, conserved site ISU55_11040 IPR001328 Peptidyl-tRNA hydrolase ISU55_11045 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 ISU55_11045 IPR012676 TGS-like ISU55_11045 IPR031167 OBG-type guanine nucleotide-binding (G) domain ISU55_11045 IPR012675 Beta-grasp domain superfamily ISU55_11045 IPR023192 TGS-like domain superfamily ISU55_11045 IPR006073 GTP binding domain ISU55_11045 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11045 IPR004095 TGS ISU55_11045 IPR041706 YchF, N-terminal ISU55_11045 IPR013029 YchF, C-terminal domain ISU55_11085 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain ISU55_11085 IPR029058 Alpha/Beta hydrolase fold ISU55_11090 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_11090 IPR039420 Transcriptional regulatory protein WalR-like ISU55_11090 IPR001789 Signal transduction response regulator, receiver domain ISU55_11090 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response ISU55_11090 IPR011006 CheY-like superfamily ISU55_11090 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_11095 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_11095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_11095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_11095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_11095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_11095 IPR006290 Heavy metal sensor kinase ISU55_11095 IPR003660 HAMP domain ISU55_11095 IPR005467 Histidine kinase domain ISU55_11135 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_11135 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_11135 IPR036291 NAD(P)-binding domain superfamily ISU55_11140 IPR016584 Methyltransferase VrtF-like ISU55_11140 IPR013217 Methyltransferase type 12 ISU55_11140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_11160 IPR001207 Transposase, mutator type ISU55_11205 IPR036291 NAD(P)-binding domain superfamily ISU55_11205 IPR001509 NAD-dependent epimerase/dehydratase ISU55_11210 IPR016039 Thiolase-like ISU55_11210 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 ISU55_11210 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal ISU55_11210 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU55_11215 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 ISU55_11215 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU55_11215 IPR016039 Thiolase-like ISU55_11215 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal ISU55_11225 IPR014710 RmlC-like jelly roll fold ISU55_11225 IPR011051 RmlC-like cupin domain superfamily ISU55_11225 IPR010282 Uncharacterised protein family HutD/Ves ISU55_11225 IPR023482 Uncharacterised protein family Ves ISU55_11230 IPR023512 Deaminase MtaD/DadD ISU55_11230 IPR032466 Metal-dependent hydrolase ISU55_11230 IPR006680 Amidohydrolase-related ISU55_11230 IPR011059 Metal-dependent hydrolase, composite domain superfamily ISU55_11235 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_11235 IPR036390 Winged helix DNA-binding domain superfamily ISU55_11235 IPR000524 Transcription regulator HTH, GntR ISU55_11235 IPR010248 Histidine utilization repressor ISU55_11235 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ISU55_11235 IPR011663 UbiC transcription regulator-associated ISU55_11240 IPR032466 Metal-dependent hydrolase ISU55_11240 IPR006680 Amidohydrolase-related ISU55_11240 IPR011059 Metal-dependent hydrolase, composite domain superfamily ISU55_11240 IPR005920 Imidazolonepropionase ISU55_11255 IPR003593 AAA+ ATPase domain ISU55_11255 IPR001270 ClpA/B family ISU55_11255 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11255 IPR002611 IstB-like ATP-binding protein ISU55_11255 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_11260 IPR001584 Integrase, catalytic core ISU55_11260 IPR017894 HTH domain, IS21 transposase-type ISU55_11260 IPR012337 Ribonuclease H-like superfamily ISU55_11260 IPR036397 Ribonuclease H superfamily ISU55_11260 IPR006120 Resolvase, HTH domain ISU55_11280 IPR015855 ABC transporter, maltose/maltodextrin import, MalK ISU55_11280 IPR017871 ABC transporter, conserved site ISU55_11280 IPR003593 AAA+ ATPase domain ISU55_11280 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_11280 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11280 IPR013611 Transport-associated OB, type 2 ISU55_11280 IPR003439 ABC transporter-like ISU55_11285 IPR035906 MetI-like superfamily ISU55_11285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_11290 IPR035906 MetI-like superfamily ISU55_11290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_11300 IPR000683 Oxidoreductase, N-terminal ISU55_11300 IPR004104 Oxidoreductase, C-terminal ISU55_11300 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase ISU55_11300 IPR036291 NAD(P)-binding domain superfamily ISU55_11305 IPR036390 Winged helix DNA-binding domain superfamily ISU55_11305 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ISU55_11305 IPR000524 Transcription regulator HTH, GntR ISU55_11305 IPR011663 UbiC transcription regulator-associated ISU55_11305 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_11375 IPR036624 Hcp1-like superfamily ISU55_11375 IPR008514 Type VI secretion system effector, Hcp ISU55_11420 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ISU55_11420 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial ISU55_11420 IPR000462 CDP-alcohol phosphatidyltransferase ISU55_11425 IPR010994 RuvA domain 2-like ISU55_11425 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ISU55_11425 IPR001943 UVR domain ISU55_11425 IPR036876 UVR domain superfamily ISU55_11425 IPR004791 UvrABC system, subunit C ISU55_11425 IPR001162 UvrC family homology region ISU55_11425 IPR035901 GIY-YIG endonuclease superfamily ISU55_11425 IPR038476 UvrC homology region 2 superfamily ISU55_11425 IPR000305 GIY-YIG endonuclease ISU55_11430 IPR000792 Transcription regulator LuxR, C-terminal ISU55_11430 IPR001789 Signal transduction response regulator, receiver domain ISU55_11430 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_11430 IPR011006 CheY-like superfamily ISU55_11440 IPR009707 Membrane protein GlpM/YdgC ISU55_11450 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_11450 IPR027385 Outer membrane protein beta-barrel domain ISU55_11450 IPR000758 Virulence-related outer membrane protein ISU55_11460 IPR004841 Amino acid permease/ SLC12A domain ISU55_11460 IPR004840 Amino acid permease, conserved site ISU55_11465 IPR015915 Kelch-type beta propeller ISU55_11465 IPR006652 Kelch repeat type 1 ISU55_11465 IPR019936 Mutatrotase, YjhT-like ISU55_11470 IPR005025 NADPH-dependent FMN reductase-like ISU55_11470 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic ISU55_11470 IPR008254 Flavodoxin/nitric oxide synthase ISU55_11470 IPR010089 Flavoprotein WrbA-like ISU55_11470 IPR029039 Flavoprotein-like superfamily ISU55_11475 IPR006313 Deferrochelatase/peroxidase EfeB ISU55_11475 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_11475 IPR011008 Dimeric alpha-beta barrel ISU55_11475 IPR006314 Dyp-type peroxidase ISU55_11480 IPR008972 Cupredoxin ISU55_11480 IPR028096 EfeO-type cupredoxin-like domain ISU55_11480 IPR018976 Imelysin-like domain ISU55_11480 IPR034981 EfeO/Algp7, imelysin-like domain ISU55_11480 IPR038352 Imelysin-like domain superfamily ISU55_11485 IPR004923 Iron permease FTR1/Fip1/EfeU ISU55_11490 IPR038377 Sodium/glucose symporter superfamily ISU55_11490 IPR011851 Sodium/proline symporter ISU55_11490 IPR001734 Sodium/solute symporter ISU55_11490 IPR018212 Sodium/solute symporter, conserved site ISU55_11500 IPR016160 Aldehyde dehydrogenase, cysteine active site ISU55_11500 IPR025703 Bifunctional protein PutA ISU55_11500 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 ISU55_11500 IPR029041 FAD-linked oxidoreductase-like ISU55_11500 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain ISU55_11500 IPR002872 Proline dehydrogenase domain ISU55_11500 IPR010985 Ribbon-helix-helix ISU55_11500 IPR016163 Aldehyde dehydrogenase, C-terminal ISU55_11500 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_11500 IPR024082 Proline dehydrogenase PutA, domain II ISU55_11500 IPR016162 Aldehyde dehydrogenase, N-terminal ISU55_11500 IPR024090 Proline dehydrogenase PutA, domain I ISU55_11500 IPR015590 Aldehyde dehydrogenase domain ISU55_11500 IPR013321 Arc-type ribbon-helix-helix ISU55_11500 IPR024089 Proline dehydrogenase PutA, domain I/II ISU55_11500 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ISU55_11515 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11515 IPR017871 ABC transporter, conserved site ISU55_11515 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ISU55_11515 IPR003593 AAA+ ATPase domain ISU55_11515 IPR003439 ABC transporter-like ISU55_11520 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_11520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_11520 IPR035906 MetI-like superfamily ISU55_11525 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_11525 IPR001320 Ionotropic glutamate receptor ISU55_11525 IPR018313 Solute-binding protein family 3, conserved site ISU55_11530 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase ISU55_11530 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_11530 IPR005966 D-cysteine desulfhydrase ISU55_11530 IPR023702 D-cysteine desulphhydrase, bacterial ISU55_11530 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_11535 IPR022523 Flagellar regulator, FliZ ISU55_11535 IPR004107 Integrase, SAM-like, N-terminal ISU55_11540 IPR012845 RNA polymerase sigma factor, FliA/WhiG ISU55_11540 IPR007630 RNA polymerase sigma-70 region 4 ISU55_11540 IPR007624 RNA polymerase sigma-70 region 3 ISU55_11540 IPR013325 RNA polymerase sigma factor, region 2 ISU55_11540 IPR007627 RNA polymerase sigma-70 region 2 ISU55_11540 IPR000943 RNA polymerase sigma-70 ISU55_11540 IPR013324 RNA polymerase sigma factor, region 3/4-like ISU55_11540 IPR028617 RNA polymerase sigma factor FliA ISU55_11540 IPR014284 RNA polymerase sigma-70 like domain ISU55_11545 IPR014981 Flagellin D3 ISU55_11545 IPR001029 Flagellin, D0/D1 domain ISU55_11545 IPR001492 Flagellin ISU55_11550 IPR010810 Flagellin hook, IN motif ISU55_11550 IPR010809 Flagellar hook-associated protein 2, C-terminal ISU55_11550 IPR040026 Flagellar hook-associated protein 2 ISU55_11550 IPR003481 Flagellar hook-associated protein 2, N-terminal ISU55_11555 IPR036584 Flagellar protein FliS superfamily ISU55_11555 IPR003713 Flagellar protein FliS ISU55_11560 IPR008622 Flagellar protein FliT ISU55_11565 IPR009057 Homeobox-like domain superfamily ISU55_11565 IPR020449 Transcription regulator HTH, AraC- type ISU55_11565 IPR018062 HTH domain AraC-type, conserved site ISU55_11565 IPR018060 DNA binding HTH domain, AraC-type ISU55_11570 IPR033479 Double Cache domain 1 ISU55_11570 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase ISU55_11570 IPR029787 Nucleotide cyclase ISU55_11570 IPR029151 Periplasmic sensor-like domain superfamily ISU55_11570 IPR003660 HAMP domain ISU55_11575 IPR037522 HD-GYP domain ISU55_11575 IPR006674 HD domain ISU55_11575 IPR003607 HD/PDEase domain ISU55_11575 IPR006675 HDIG domain ISU55_11580 IPR011257 DNA glycosylase ISU55_11580 IPR003265 HhH-GPD domain ISU55_11600 IPR001624 Flagellar hook-basal body complex protein FliE ISU55_11605 IPR013556 Flagellar M-ring C-terminal ISU55_11605 IPR000067 Flagellar M-ring protein FliF ISU55_11605 IPR006182 Secretory protein YscJ/FliF ISU55_11610 IPR032779 Flagellar motor switch protein FliG, middle domain ISU55_11610 IPR000090 Flagellar motor switch protein FliG ISU55_11610 IPR023087 Flagellar motor switch protein FliG, C-terminal ISU55_11610 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ISU55_11610 IPR011002 Flagellar motor switch protein FliG, alpha-helical ISU55_11615 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ISU55_11615 IPR000563 Flagellar assembly protein FliH ISU55_11620 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ISU55_11620 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ISU55_11620 IPR003593 AAA+ ATPase domain ISU55_11620 IPR005714 ATPase, type III secretion system, FliI/YscN ISU55_11620 IPR032463 ATPase, type III secretion system, FliI ISU55_11620 IPR040627 T3SS EscN ATPase, C-terminal ISU55_11620 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11620 IPR020005 Flagellar export ATPase FliI, clade 1 ISU55_11625 IPR018006 Flagellar FliJ, proteobacteria ISU55_11625 IPR012823 Flagellar export FliJ ISU55_11630 IPR001635 Flagellar hook-length control protein FliK ISU55_11630 IPR021136 Flagellar hook-length control protein-like, C-terminal ISU55_11630 IPR038610 FliK-like, C-terminal domain superfamily ISU55_11635 IPR005503 Flagellar basal body-associated protein FliL ISU55_11640 IPR028976 CheC-like superfamily ISU55_11640 IPR001689 Flagellar motor switch protein FliM ISU55_11640 IPR036429 SpoA-like superfamily ISU55_11640 IPR001543 Surface presentation of antigen (SpoA) ISU55_11645 IPR036429 SpoA-like superfamily ISU55_11645 IPR012826 Flagellar motor switch FliN ISU55_11645 IPR031576 Flagellar motor switch protein FliN, N-terminal ISU55_11645 IPR001543 Surface presentation of antigen (SpoA) ISU55_11645 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb ISU55_11650 IPR022781 Flagellar biosynthesis protein, FliO ISU55_11655 IPR005837 Flagellar transport protein FliP ISU55_11655 IPR005838 Type III secretion system inner membrane P protein ISU55_11660 IPR006305 Flagellar biosynthesis protein FliQ ISU55_11660 IPR002191 Bacterial export protein family 3 ISU55_11665 IPR006303 Flagellar biosynthesis protein FliR ISU55_11665 IPR002010 Type III secretion system inner membrane R protein ISU55_11680 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_11680 IPR030877 Sulfofructose kinase ISU55_11680 IPR002139 Ribokinase/fructokinase ISU55_11680 IPR011611 Carbohydrate kinase PfkB ISU55_11680 IPR029056 Ribokinase-like ISU55_11685 IPR001851 ABC transporter, permease ISU55_11690 IPR003439 ABC transporter-like ISU55_11690 IPR017871 ABC transporter, conserved site ISU55_11690 IPR015861 ABC transporter, ribose import, RbsA ISU55_11690 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11690 IPR003593 AAA+ ATPase domain ISU55_11695 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB ISU55_11695 IPR028082 Periplasmic binding protein-like I ISU55_11695 IPR025997 Periplasmic binding protein ISU55_11700 IPR001851 ABC transporter, permease ISU55_11705 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_11705 IPR001303 Class II aldolase/adducin N-terminal ISU55_11705 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ISU55_11705 IPR036291 NAD(P)-binding domain superfamily ISU55_11705 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase ISU55_11710 IPR013324 RNA polymerase sigma factor, region 3/4-like ISU55_11710 IPR007324 Sugar-binding domain, putative ISU55_11710 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_11710 IPR037171 NagB/RpiA transferase-like ISU55_11715 IPR001029 Flagellin, D0/D1 domain ISU55_11715 IPR013384 Flagellar hook-associated protein 3 ISU55_11720 IPR002371 Flagellar hook-associated protein 1 ISU55_11720 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_11720 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_11725 IPR019301 Flagellar protein FlgJ, N-terminal ISU55_11725 IPR013377 Peptidoglycan hydrolase FlgJ ISU55_11725 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain ISU55_11730 IPR001782 Flagellar P-ring protein ISU55_11735 IPR000527 Flagellar L-ring protein ISU55_11750 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ISU55_11750 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_11750 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ISU55_11750 IPR037058 Flagellar hook protein FlgE superfamily ISU55_11750 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_11750 IPR011491 Flagellar hook protein FlgE ISU55_11750 IPR019776 Flagellar basal body rod protein, conserved site ISU55_11755 IPR005648 Flagellar hook capping protein ISU55_11755 IPR025965 FlgD Ig-like domain ISU55_11755 IPR025963 FlgD Tudor-like domain ISU55_11760 IPR006299 Flagellar basal-body rod protein FlgC ISU55_11760 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_11760 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_11760 IPR019776 Flagellar basal body rod protein, conserved site ISU55_11765 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_11765 IPR019776 Flagellar basal body rod protein, conserved site ISU55_11765 IPR006300 Flagellar basal-body rod protein FlgB ISU55_11770 IPR013974 SAF domain ISU55_11770 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ISU55_11770 IPR041231 FlgA, N-terminal ISU55_11770 IPR039246 Flagellar protein FlgA ISU55_11775 IPR035890 Anti-sigma-28 factor FlgM superfamily ISU55_11775 IPR007412 Anti-sigma-28 factor, FlgM ISU55_11775 IPR031316 Anti-sigma-28 factor FlgM, C-terminal ISU55_11780 IPR007809 FlgN-like protein ISU55_11780 IPR036679 FlgN-like superfamily ISU55_11790 IPR036515 Transposase IS200-like superfamily ISU55_11790 IPR002686 Transposase IS200-like ISU55_11800 IPR009420 Flagellar protein FlhE ISU55_11805 IPR042194 FHIPEP, domain 1 ISU55_11805 IPR042193 FHIPEP, domain 3 ISU55_11805 IPR042196 FHIPEP, domain 4 ISU55_11805 IPR006301 Flagellar biosynthesis protein FlhA ISU55_11805 IPR001712 Type III secretion system FHIPEP ISU55_11805 IPR025505 FHIPEP conserved site ISU55_11810 IPR029025 Type III secretion system substrate exporter, C-terminal ISU55_11810 IPR006135 Type III secretion system substrate exporter ISU55_11810 IPR006136 Flagellar biosynthetic protein FlhB ISU55_11825 IPR019648 Protein of unknown function DUF2511 ISU55_11835 IPR014756 Immunoglobulin E-set ISU55_11835 IPR032694 Copper transport protein C/D ISU55_11835 IPR007348 CopC domain ISU55_11840 IPR001519 Ferritin ISU55_11840 IPR012347 Ferritin-like ISU55_11840 IPR009040 Ferritin-like diiron domain ISU55_11840 IPR009078 Ferritin-like superfamily ISU55_11840 IPR008331 Ferritin/DPS protein domain ISU55_11840 IPR041719 Ferritin, prokaryotic-type ISU55_11845 IPR009052 DNA polymerase III-theta, bacterial ISU55_11845 IPR036745 DNA polymerase III-theta superfamily ISU55_11850 IPR000073 Alpha/beta hydrolase fold-1 ISU55_11850 IPR029058 Alpha/Beta hydrolase fold ISU55_11850 IPR002410 Peptidase S33 ISU55_11850 IPR005944 Proline iminopeptidase ISU55_11855 IPR002471 Peptidase S9, serine active site ISU55_11855 IPR002470 Peptidase S9A, prolyl oligopeptidase ISU55_11855 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ISU55_11855 IPR029058 Alpha/Beta hydrolase fold ISU55_11855 IPR023302 Peptidase S9A, N-terminal domain ISU55_11860 IPR025603 YebF/Colicin-M immunity protein ISU55_11860 IPR038703 YebF/Cmi superfamily ISU55_11860 IPR020236 Uncharacterised protein family YebF ISU55_11865 IPR008314 Uncharacterised conserved protein UCP029143 ISU55_11865 IPR007374 ASCH domain ISU55_11865 IPR015947 PUA-like superfamily ISU55_11870 IPR009813 Uncharacterised protein family YebG ISU55_11870 IPR038627 YebG-like superfamily ISU55_11875 IPR011545 DEAD/DEAH box helicase domain ISU55_11875 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ISU55_11875 IPR028619 ATP-dependent RNA helicase DbpA ISU55_11875 IPR001650 Helicase, C-terminal ISU55_11875 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ISU55_11875 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11875 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ISU55_11875 IPR014014 RNA helicase, DEAD-box type, Q motif ISU55_11875 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_11880 IPR011761 ATP-grasp fold ISU55_11880 IPR013815 ATP-grasp fold, subdomain 1 ISU55_11880 IPR016185 Pre-ATP-grasp domain superfamily ISU55_11880 IPR011054 Rudiment single hybrid motif ISU55_11880 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ISU55_11880 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase ISU55_11885 IPR005371 Uncharacterised protein family UPF0181 ISU55_11890 IPR015890 Chorismate-utilising enzyme, C-terminal ISU55_11890 IPR005802 Aminodeoxychorismate synthase, component I ISU55_11890 IPR005801 ADC synthase ISU55_11890 IPR019999 Anthranilate synthase component I-like ISU55_11890 IPR006805 Anthranilate synthase component I, N-terminal ISU55_11895 IPR000086 NUDIX hydrolase domain ISU55_11895 IPR000059 NUDIX hydrolase, NudL, conserved site ISU55_11895 IPR023735 Uncharacterised nudix hydrolase NudL ISU55_11895 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_11900 IPR005131 Serine dehydratase beta chain ISU55_11900 IPR005130 Serine dehydratase-like, alpha subunit ISU55_11900 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form ISU55_11900 IPR029009 Allosteric substrate binding domain superfamily ISU55_11905 IPR012349 FMN-binding split barrel ISU55_11905 IPR002563 Flavin reductase like domain ISU55_11905 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component ISU55_11910 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein ISU55_11910 IPR004925 HpaB/PvcC/4-BUDH ISU55_11910 IPR024719 HpaB/PvcC/4-BUDH C-terminal ISU55_11910 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ISU55_11910 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria ISU55_11910 IPR024674 HpaB/PvcC/4-BUDH N-terminal ISU55_11910 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ISU55_11915 IPR011701 Major facilitator superfamily ISU55_11915 IPR036259 MFS transporter superfamily ISU55_11915 IPR020846 Major facilitator superfamily domain ISU55_11920 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_11920 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase ISU55_11920 IPR005000 HpcH/HpaI aldolase/citrate lyase domain ISU55_11920 IPR040442 Pyruvate kinase-like domain superfamily ISU55_11920 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales ISU55_11925 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase ISU55_11925 IPR011234 Fumarylacetoacetase-like, C-terminal ISU55_11925 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ISU55_11930 IPR014347 Tautomerase/MIF superfamily ISU55_11930 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase ISU55_11935 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase ISU55_11935 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B ISU55_11940 IPR016163 Aldehyde dehydrogenase, C-terminal ISU55_11940 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ISU55_11940 IPR016162 Aldehyde dehydrogenase, N-terminal ISU55_11940 IPR015590 Aldehyde dehydrogenase domain ISU55_11940 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_11940 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase ISU55_11940 IPR016160 Aldehyde dehydrogenase, cysteine active site ISU55_11945 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit ISU55_11945 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ISU55_11945 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit ISU55_11945 IPR011234 Fumarylacetoacetase-like, C-terminal ISU55_11950 IPR011234 Fumarylacetoacetase-like, C-terminal ISU55_11950 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ISU55_11950 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit ISU55_11950 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit ISU55_11955 IPR023187 Transcriptional regulator MarR-type, conserved site ISU55_11955 IPR000835 MarR-type HTH domain ISU55_11955 IPR012712 HTH-type transcriptional regulator HpaR/FarR ISU55_11955 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_11955 IPR036390 Winged helix DNA-binding domain superfamily ISU55_11960 IPR000644 CBS domain ISU55_11960 IPR005496 Integral membrane protein TerC ISU55_11960 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_11960 IPR005170 Transporter-associated domain ISU55_11960 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_11965 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup ISU55_11965 IPR004720 Phosphotransferase system, sorbose subfamily IIB component ISU55_11965 IPR033887 PTS system mannose/sorbose specific IIA subunit ISU55_11965 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily ISU55_11965 IPR004701 Phosphotransferase system, mannose-type IIA component ISU55_11965 IPR013789 Phosphotransferase system, mannose family IIA component ISU55_11965 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily ISU55_11970 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit ISU55_11975 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component ISU55_11980 IPR009328 Protein of unknown function DUF986 ISU55_11990 IPR006120 Resolvase, HTH domain ISU55_11990 IPR001584 Integrase, catalytic core ISU55_11990 IPR017894 HTH domain, IS21 transposase-type ISU55_11990 IPR036397 Ribonuclease H superfamily ISU55_11990 IPR012337 Ribonuclease H-like superfamily ISU55_11995 IPR002611 IstB-like ATP-binding protein ISU55_11995 IPR003593 AAA+ ATPase domain ISU55_11995 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_11995 IPR001270 ClpA/B family ISU55_11995 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_12000 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_12000 IPR028082 Periplasmic binding protein-like I ISU55_12000 IPR001761 Periplasmic binding protein/LacI sugar binding domain ISU55_12000 IPR000843 LacI-type HTH domain ISU55_12010 IPR024079 Metallopeptidase, catalytic domain superfamily ISU55_12010 IPR042252 MtfA, N-terminal ISU55_12010 IPR010384 MtfA family ISU55_12025 IPR003593 AAA+ ATPase domain ISU55_12025 IPR011527 ABC transporter type 1, transmembrane domain ISU55_12025 IPR039421 Type I protein exporter ISU55_12025 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12025 IPR017871 ABC transporter, conserved site ISU55_12025 IPR003439 ABC transporter-like ISU55_12025 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_12035 IPR009057 Homeobox-like domain superfamily ISU55_12035 IPR018060 DNA binding HTH domain, AraC-type ISU55_12035 IPR018062 HTH domain AraC-type, conserved site ISU55_12035 IPR020449 Transcription regulator HTH, AraC- type ISU55_12040 IPR020262 Uncharacterised protein family YecJ ISU55_12045 IPR025611 YobH-like protein ISU55_12050 IPR020907 PhoP/PhoQ regulator MgrB ISU55_12055 IPR025594 YebO-like protein ISU55_12070 IPR004840 Amino acid permease, conserved site ISU55_12070 IPR004841 Amino acid permease/ SLC12A domain ISU55_12075 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_12075 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP ISU55_12080 IPR019672 Protein of unknown function DUF2627 ISU55_12085 IPR012156 Cold shock, CspA ISU55_12085 IPR011129 Cold shock domain ISU55_12085 IPR019844 Cold-shock (CSD) domain ISU55_12085 IPR002059 Cold-shock protein, DNA-binding ISU55_12085 IPR012340 Nucleic acid-binding, OB-fold ISU55_12090 IPR038371 Multi-copper polyphenol oxidoreductase superfamily ISU55_12090 IPR003730 Multi-copper polyphenol oxidoreductase ISU55_12090 IPR011324 Cytotoxic necrotizing factor-like, catalytic ISU55_12095 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted ISU55_12095 IPR025714 Methyltransferase domain ISU55_12095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_12110 IPR030149 TonB-dependent siderophore receptor FcuA/FatA ISU55_12110 IPR012910 TonB-dependent receptor, plug domain ISU55_12110 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_12110 IPR039423 TonB-dependent receptor-like ISU55_12110 IPR010105 TonB-dependent siderophore receptor ISU55_12110 IPR010917 TonB-dependent receptor, conserved site ISU55_12110 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_12110 IPR010916 TonB box, conserved site ISU55_12110 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_12120 IPR003593 AAA+ ATPase domain ISU55_12120 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12120 IPR001270 ClpA/B family ISU55_12120 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_12120 IPR002611 IstB-like ATP-binding protein ISU55_12125 IPR006120 Resolvase, HTH domain ISU55_12125 IPR017894 HTH domain, IS21 transposase-type ISU55_12125 IPR012337 Ribonuclease H-like superfamily ISU55_12125 IPR036397 Ribonuclease H superfamily ISU55_12125 IPR001584 Integrase, catalytic core ISU55_12135 IPR001207 Transposase, mutator type ISU55_12140 IPR036259 MFS transporter superfamily ISU55_12140 IPR020846 Major facilitator superfamily domain ISU55_12140 IPR000576 LacY/RafB permease family ISU55_12140 IPR018457 LacY/RafB permease family, conserved site ISU55_12145 IPR002252 Glycoside hydrolase family 36 ISU55_12145 IPR013785 Aldolase-type TIM barrel ISU55_12145 IPR000111 Glycoside hydrolase family 27/36, conserved site ISU55_12145 IPR017853 Glycoside hydrolase superfamily ISU55_12145 IPR031704 Glycosyl hydrolase family 36, N-terminal ISU55_12145 IPR031705 Glycosyl hydrolase family 36, C-terminal ISU55_12145 IPR038417 Alpha-galactosidase, N-terminal domain superfamily ISU55_12155 IPR008278 4'-phosphopantetheinyl transferase domain ISU55_12155 IPR037143 4'-phosphopantetheinyl transferase domain superfamily ISU55_12155 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain ISU55_12155 IPR003542 Enterobactin synthetase-like, component D ISU55_12160 IPR018389 TRAP transporter solute receptor DctP/TeaA ISU55_12160 IPR038404 TRAP transporter solute receptor DctP superfamily ISU55_12160 IPR004682 TRAP transporter solute receptor, DctP family ISU55_12170 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ISU55_12170 IPR004681 TRAP transporter large membrane protein DctM ISU55_12175 IPR011006 CheY-like superfamily ISU55_12175 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_12175 IPR000792 Transcription regulator LuxR, C-terminal ISU55_12175 IPR001789 Signal transduction response regulator, receiver domain ISU55_12185 IPR018636 Protein of unknown function DUF2058 ISU55_12195 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ISU55_12195 IPR002509 NodB homology domain ISU55_12195 IPR037950 Peptidoglycan deacetylase PgdA-like ISU55_12205 IPR002528 Multi antimicrobial extrusion protein ISU55_12210 IPR018223 Argininosuccinate synthase, conserved site ISU55_12210 IPR001518 Argininosuccinate synthase ISU55_12210 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail ISU55_12210 IPR023437 Argininosuccinate synthase, type 2 subfamily ISU55_12210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_12210 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body ISU55_12215 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent ISU55_12215 IPR013785 Aldolase-type TIM barrel ISU55_12215 IPR000262 FMN-dependent dehydrogenase ISU55_12215 IPR037396 FMN hydroxy acid dehydrogenase domain ISU55_12215 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site ISU55_12215 IPR020920 L-lactate dehydrogenase, bacterial ISU55_12220 IPR036849 Enolase-like, C-terminal domain superfamily ISU55_12220 IPR034610 L-fuconate dehydratase ISU55_12220 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ISU55_12220 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ISU55_12220 IPR029017 Enolase-like, N-terminal ISU55_12220 IPR029065 Enolase C-terminal domain-like ISU55_12225 IPR011234 Fumarylacetoacetase-like, C-terminal ISU55_12225 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ISU55_12230 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_12230 IPR036291 NAD(P)-binding domain superfamily ISU55_12230 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_12235 IPR007263 Protein of unknown function DUF393 ISU55_12240 IPR036259 MFS transporter superfamily ISU55_12240 IPR011701 Major facilitator superfamily ISU55_12240 IPR020846 Major facilitator superfamily domain ISU55_12245 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ISU55_12245 IPR024519 Inverse autotransporter, beta-domain ISU55_12245 IPR038177 Inverse autotransporter, beta-domain superfamily ISU55_12245 IPR003535 Intimin/invasin bacterial adhesion mediator protein ISU55_12245 IPR008964 Invasin/intimin cell-adhesion fragments ISU55_12245 IPR015217 Invasin, domain 3 ISU55_12245 IPR018392 LysM domain ISU55_12245 IPR022409 PKD/Chitinase domain ISU55_12245 IPR013783 Immunoglobulin-like fold ISU55_12250 IPR001207 Transposase, mutator type ISU55_12255 IPR007458 Protein of unknown function DUF496 ISU55_12265 IPR034748 Exonuclease I, C-terminal alpha-helical domain ISU55_12265 IPR023607 Exodeoxyribonuclease I ISU55_12265 IPR038649 Exonuclease I, SH3-like domain superfamily ISU55_12265 IPR034747 Exonuclease I, SH3-like domain ISU55_12265 IPR013620 Exodeoxyribonuclease I, C-terminal ISU55_12265 IPR012337 Ribonuclease H-like superfamily ISU55_12265 IPR013520 Exonuclease, RNase T/DNA polymerase III ISU55_12265 IPR036397 Ribonuclease H superfamily ISU55_12275 IPR002293 Amino acid/polyamine transporter I ISU55_12280 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ISU55_12280 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ISU55_12280 IPR016205 Glycerol dehydrogenase ISU55_12285 IPR015861 ABC transporter, ribose import, RbsA ISU55_12285 IPR017871 ABC transporter, conserved site ISU55_12285 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12285 IPR003439 ABC transporter-like ISU55_12285 IPR003593 AAA+ ATPase domain ISU55_12290 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12290 IPR015861 ABC transporter, ribose import, RbsA ISU55_12290 IPR017871 ABC transporter, conserved site ISU55_12290 IPR003439 ABC transporter-like ISU55_12290 IPR003593 AAA+ ATPase domain ISU55_12295 IPR001851 ABC transporter, permease ISU55_12310 IPR001509 NAD-dependent epimerase/dehydratase ISU55_12310 IPR036291 NAD(P)-binding domain superfamily ISU55_12320 IPR013115 Histidine biosynthesis HisG, C-terminal ISU55_12320 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ISU55_12320 IPR020621 ATP phosphoribosyltransferase HisG, long form ISU55_12320 IPR011322 Nitrogen regulatory PII-like, alpha/beta ISU55_12320 IPR001348 ATP phosphoribosyltransferase HisG ISU55_12320 IPR018198 ATP phosphoribosyltransferase, conserved site ISU55_12320 IPR013820 ATP phosphoribosyltransferase, catalytic domain ISU55_12325 IPR001692 Histidinol dehydrogenase, conserved site ISU55_12325 IPR012131 Histidinol dehydrogenase ISU55_12325 IPR022695 Histidinol dehydrogenase, monofunctional ISU55_12325 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_12330 IPR005861 Histidinol-phosphate aminotransferase family ISU55_12330 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ISU55_12330 IPR004839 Aminotransferase, class I/classII ISU55_12330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_12330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_12330 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_12335 IPR006543 Histidinol-phosphate phosphatase ISU55_12335 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site ISU55_12335 IPR023214 HAD superfamily ISU55_12335 IPR006549 HAD-superfamily hydrolase,subfamily IIIA ISU55_12335 IPR036412 HAD-like superfamily ISU55_12335 IPR000807 Imidazoleglycerol-phosphate dehydratase ISU55_12335 IPR020566 Histidine biosynthesis bifunctional protein HisB ISU55_12335 IPR005954 Histidinol-phosphatase ISU55_12335 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_12335 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily ISU55_12340 IPR029062 Class I glutamine amidotransferase-like ISU55_12340 IPR017926 Glutamine amidotransferase ISU55_12340 IPR010139 Imidazole glycerol phosphate synthase, subunit H ISU55_12345 IPR006062 Histidine biosynthesis ISU55_12345 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA ISU55_12345 IPR011060 Ribulose-phosphate binding barrel ISU55_12345 IPR013785 Aldolase-type TIM barrel ISU55_12345 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase ISU55_12350 IPR011060 Ribulose-phosphate binding barrel ISU55_12350 IPR006062 Histidine biosynthesis ISU55_12350 IPR013785 Aldolase-type TIM barrel ISU55_12350 IPR004651 Histidine biosynthesis, HisF ISU55_12355 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily ISU55_12355 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like ISU55_12355 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain ISU55_12355 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase ISU55_12355 IPR023019 Histidine biosynthesis bifunctional protein HisIE ISU55_12360 IPR006184 6-phosphogluconate-binding site ISU55_12360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_12360 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding ISU55_12360 IPR006114 6-phosphogluconate dehydrogenase, C-terminal ISU55_12360 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating ISU55_12360 IPR036291 NAD(P)-binding domain superfamily ISU55_12360 IPR006183 6-phosphogluconate dehydrogenase ISU55_12360 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_12365 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_12365 IPR005835 Nucleotidyl transferase domain ISU55_12365 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type ISU55_12370 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_12370 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type ISU55_12370 IPR005835 Nucleotidyl transferase domain ISU55_12375 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal ISU55_12375 IPR022770 Ferric iron reductase FhuF domain ISU55_12375 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like ISU55_12380 IPR012910 TonB-dependent receptor, plug domain ISU55_12380 IPR011662 Secretin/TonB, short N-terminal domain ISU55_12380 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_12380 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_12380 IPR010105 TonB-dependent siderophore receptor ISU55_12380 IPR039423 TonB-dependent receptor-like ISU55_12380 IPR010917 TonB-dependent receptor, conserved site ISU55_12380 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_12385 IPR002491 ABC transporter periplasmic binding domain ISU55_12390 IPR037294 ABC transporter, BtuC-like ISU55_12390 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_12395 IPR037294 ABC transporter, BtuC-like ISU55_12395 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_12400 IPR003593 AAA+ ATPase domain ISU55_12400 IPR003439 ABC transporter-like ISU55_12400 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12400 IPR017871 ABC transporter, conserved site ISU55_12405 IPR022770 Ferric iron reductase FhuF domain ISU55_12405 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like ISU55_12405 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal ISU55_12415 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ISU55_12415 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_12420 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_12420 IPR002129 Pyridoxal phosphate-dependent decarboxylase ISU55_12420 IPR021115 Pyridoxal-phosphate binding site ISU55_12420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_12425 IPR008090 Ferric iron reductase ISU55_12425 IPR024726 Ferric iron reductase, C-terminal ISU55_12425 IPR022770 Ferric iron reductase FhuF domain ISU55_12430 IPR000644 CBS domain ISU55_12430 IPR005496 Integral membrane protein TerC ISU55_12430 IPR005170 Transporter-associated domain ISU55_12430 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_12430 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_12435 IPR007844 AsmA ISU55_12440 IPR036157 dUTPase-like superfamily ISU55_12440 IPR033704 dUTPase, trimeric ISU55_12440 IPR029054 dUTPase-like ISU55_12440 IPR011962 dCTP deaminase ISU55_12445 IPR000764 Uridine kinase-like ISU55_12445 IPR026008 Uridine kinase ISU55_12445 IPR006083 Phosphoribulokinase/uridine kinase ISU55_12445 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12450 IPR019591 Mrp/NBP35 ATP-binding protein ISU55_12450 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ISU55_12450 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12450 IPR000808 Mrp, conserved site ISU55_12450 IPR034904 Fe-S cluster assembly domain superfamily ISU55_12455 IPR029038 Methionyl-tRNA synthetase, Zn-domain ISU55_12455 IPR033911 Methioninyl-tRNA synthetase core domain ISU55_12455 IPR015413 Methionyl/Leucyl tRNA synthetase ISU55_12455 IPR012340 Nucleic acid-binding, OB-fold ISU55_12455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_12455 IPR023458 Methionine-tRNA ligase, type 1 ISU55_12455 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ISU55_12455 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal ISU55_12455 IPR002547 tRNA-binding domain ISU55_12455 IPR014758 Methionyl-tRNA synthetase ISU55_12455 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain ISU55_12455 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_12460 IPR036515 Transposase IS200-like superfamily ISU55_12460 IPR002686 Transposase IS200-like ISU55_12480 IPR011701 Major facilitator superfamily ISU55_12480 IPR020846 Major facilitator superfamily domain ISU55_12480 IPR036259 MFS transporter superfamily ISU55_12485 IPR005538 LrgA/CidA family ISU55_12485 IPR022957 Uncharacterised protein family UPF0299 ISU55_12490 IPR007300 CidB/LrgB family ISU55_12490 IPR005261 Conserved hypothetical protein CHP00659 ISU55_12495 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain ISU55_12495 IPR016193 Cytidine deaminase-like ISU55_12495 IPR006263 Cytidine deaminase, homodimeric ISU55_12495 IPR002125 Cytidine and deoxycytidylate deaminase domain ISU55_12495 IPR016192 APOBEC/CMP deaminase, zinc-binding ISU55_12495 IPR020797 Cytidine deaminase, bacteria ISU55_12500 IPR012302 Malic enzyme, NAD-binding ISU55_12500 IPR012301 Malic enzyme, N-terminal domain ISU55_12500 IPR015884 Malic enzyme, conserved site ISU55_12500 IPR001891 Malic oxidoreductase ISU55_12500 IPR037062 Malic enzyme, N-terminal domain superfamily ISU55_12500 IPR036291 NAD(P)-binding domain superfamily ISU55_12500 IPR023667 NAD-dependent malic enzyme, proteobacteria ISU55_12505 IPR023604 Uncharacterised protein family SanA ISU55_12505 IPR003848 Domain of unknown function DUF218 ISU55_12510 IPR001851 ABC transporter, permease ISU55_12510 IPR030158 Galactoside transport system permease protein MglC ISU55_12515 IPR003593 AAA+ ATPase domain ISU55_12515 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12515 IPR015862 ABC transporter, galactose import, MglA ISU55_12515 IPR017871 ABC transporter, conserved site ISU55_12515 IPR003439 ABC transporter-like ISU55_12520 IPR028082 Periplasmic binding protein-like I ISU55_12520 IPR025997 Periplasmic binding protein ISU55_12525 IPR007349 Domain of unknown function DUF418 ISU55_12530 IPR018234 GTP cyclohydrolase I, conserved site ISU55_12530 IPR020602 GTP cyclohydrolase I domain ISU55_12530 IPR001474 GTP cyclohydrolase I ISU55_12535 IPR010645 Uncharacterised MFS-type transporter YbfB ISU55_12535 IPR036259 MFS transporter superfamily ISU55_12540 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_12540 IPR005119 LysR, substrate-binding ISU55_12540 IPR036390 Winged helix DNA-binding domain superfamily ISU55_12540 IPR000847 Transcription regulator HTH, LysR ISU55_12545 IPR014183 Alcohol dehydrogenase class III ISU55_12545 IPR013154 Alcohol dehydrogenase, N-terminal ISU55_12545 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ISU55_12545 IPR011032 GroES-like superfamily ISU55_12545 IPR020843 Polyketide synthase, enoylreductase domain ISU55_12545 IPR036291 NAD(P)-binding domain superfamily ISU55_12545 IPR013149 Alcohol dehydrogenase, C-terminal ISU55_12550 IPR014186 S-formylglutathione hydrolase ISU55_12550 IPR029058 Alpha/Beta hydrolase fold ISU55_12550 IPR000801 Putative esterase ISU55_12570 IPR003593 AAA+ ATPase domain ISU55_12570 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12570 IPR003439 ABC transporter-like ISU55_12570 IPR017871 ABC transporter, conserved site ISU55_12580 IPR001453 MoaB/Mog domain ISU55_12580 IPR008284 Molybdenum cofactor biosynthesis, conserved site ISU55_12580 IPR036425 MoaB/Mog-like domain superfamily ISU55_12580 IPR038987 Molybdopterin biosynthesis protein MoeA-like ISU55_12580 IPR036688 MoeA, C-terminal, domain IV superfamily ISU55_12580 IPR036135 MoeA, N-terminal and linker domain superfamily ISU55_12580 IPR005110 MoeA, N-terminal and linker domain ISU55_12580 IPR005111 MoeA, C-terminal, domain IV ISU55_12585 IPR012730 Molybdopterin synthase sulfurylase MoeB ISU55_12585 IPR035985 Ubiquitin-activating enzyme ISU55_12585 IPR000594 THIF-type NAD/FAD binding fold ISU55_12590 IPR001207 Transposase, mutator type ISU55_12600 IPR003439 ABC transporter-like ISU55_12600 IPR003593 AAA+ ATPase domain ISU55_12600 IPR032781 ABC-transporter extension domain ISU55_12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12690 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ISU55_12690 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ISU55_12690 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ISU55_12690 IPR037026 Vgr protein, OB-fold domain superfamily ISU55_12690 IPR006531 Gp5 N-terminal ISU55_12690 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ISU55_12695 IPR019489 Clp ATPase, C-terminal ISU55_12695 IPR017729 Type VI secretion system, ATPase ClpV1 ISU55_12695 IPR003959 ATPase, AAA-type, core ISU55_12695 IPR003593 AAA+ ATPase domain ISU55_12695 IPR036628 Clp, N-terminal domain superfamily ISU55_12695 IPR001270 ClpA/B family ISU55_12695 IPR018368 ClpA/B, conserved site 1 ISU55_12695 IPR041546 ClpA/ClpB, AAA lid domain ISU55_12695 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12695 IPR004176 Clp, N-terminal ISU55_12705 IPR028974 TSP type-3 repeat ISU55_12705 IPR008722 Outer membrane porin F, N-terminal ISU55_12705 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_12705 IPR006690 Outer membrane protein, OmpA-like, conserved site ISU55_12705 IPR006665 OmpA-like domain ISU55_12705 IPR006664 Outer membrane protein, bacterial ISU55_12705 IPR036737 OmpA-like domain superfamily ISU55_12720 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU55_12730 IPR001227 Acyl transferase domain superfamily ISU55_12730 IPR014043 Acyl transferase ISU55_12730 IPR024925 Malonyl CoA-acyl carrier protein transacylase ISU55_12730 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ISU55_12730 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ISU55_12730 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type ISU55_12735 IPR036736 ACP-like superfamily ISU55_12735 IPR009081 Phosphopantetheine binding ACP domain ISU55_12745 IPR036291 NAD(P)-binding domain superfamily ISU55_12745 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_12745 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_12750 IPR029045 ClpP/crotonase-like domain superfamily ISU55_12750 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ISU55_12750 IPR001753 Enoyl-CoA hydratase/isomerase ISU55_12760 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal ISU55_12760 IPR016039 Thiolase-like ISU55_12760 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain ISU55_12765 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_12765 IPR036291 NAD(P)-binding domain superfamily ISU55_12765 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_12765 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ISU55_12770 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 ISU55_12770 IPR014030 Beta-ketoacyl synthase, N-terminal ISU55_12770 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ISU55_12770 IPR000794 Beta-ketoacyl synthase ISU55_12770 IPR018201 Beta-ketoacyl synthase, active site ISU55_12770 IPR014031 Beta-ketoacyl synthase, C-terminal ISU55_12770 IPR016039 Thiolase-like ISU55_12775 IPR029069 HotDog domain superfamily ISU55_12775 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ ISU55_12775 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ISU55_12785 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_12785 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_12785 IPR036291 NAD(P)-binding domain superfamily ISU55_12785 IPR011294 3-hydroxybutyrate dehydrogenase ISU55_12790 IPR012951 Berberine/berberine-like ISU55_12790 IPR016166 FAD-binding domain, PCMH-type ISU55_12790 IPR016167 FAD-binding, type PCMH, subdomain 1 ISU55_12790 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_12790 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_12790 IPR006094 FAD linked oxidase, N-terminal ISU55_12790 IPR006093 Oxygen oxidoreductase covalent FAD-binding site ISU55_12790 IPR016164 FAD-linked oxidase-like, C-terminal ISU55_12810 IPR025526 DsrC-like domain superfamily ISU55_12810 IPR042072 DsrC-like protein, C-terminal domain ISU55_12810 IPR007453 Sulphur transfer protein DsrC/TusE ISU55_12815 IPR020456 Acylphosphatase ISU55_12815 IPR001792 Acylphosphatase-like domain ISU55_12815 IPR036046 Acylphosphatase-like domain superfamily ISU55_12815 IPR017968 Acylphosphatase, conserved site ISU55_12815 IPR028627 Acylphosphatase, bacteria ISU55_12820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_12820 IPR002478 PUA domain ISU55_12820 IPR041532 RlmI, PUA-like domain ISU55_12820 IPR023542 rRNA large subunit methyltransferase I ISU55_12820 IPR019614 S-adenosylmethionine-dependent methyltransferase ISU55_12820 IPR015947 PUA-like superfamily ISU55_12820 IPR036974 PUA domain superfamily ISU55_12825 IPR011722 Hemimethylated DNA-binding domain ISU55_12825 IPR022866 Heat shock protein HspQ ISU55_12825 IPR036623 Hemimethylated DNA-binding domain superfamily ISU55_12830 IPR003781 CoA-binding ISU55_12830 IPR036291 NAD(P)-binding domain superfamily ISU55_12835 IPR018635 Uncharacterised protein family UPF0319 ISU55_12840 IPR011607 Methylglyoxal synthase-like domain ISU55_12840 IPR018148 Methylglyoxal synthase, active site ISU55_12840 IPR036914 Methylglyoxal synthase-like domain superfamily ISU55_12840 IPR004363 Methylglyoxal synthase ISU55_12845 IPR022161 DNA helicase IV, N-terminal domain ISU55_12845 IPR014017 UvrD-like DNA helicase, C-terminal ISU55_12845 IPR014016 UvrD-like helicase, ATP-binding domain ISU55_12845 IPR000212 DNA helicase, UvrD/REP type ISU55_12845 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12845 IPR034739 UvrD/AddA helicase, N-terminal ISU55_12850 IPR005185 Inner membrane component domain ISU55_12850 IPR031308 Uncharacterised conserved protein UCP028777 ISU55_12855 IPR010019 Integral membrane protein, YccS ISU55_12855 IPR032692 Integral membrane protein YccS, N-terminal ISU55_12855 IPR010020 Integral membrane protein, YccS/YhfK ISU55_12860 IPR007076 TfoX, N-terminal ISU55_12860 IPR007077 TfoX, C-terminal ISU55_12860 IPR026256 Transcriptional regulator, TfoX/Sxy-type ISU55_12865 IPR004596 Cell division suppressor protein, SulA ISU55_12865 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12870 IPR006664 Outer membrane protein, bacterial ISU55_12870 IPR002368 Outer membrane protein, OmpA ISU55_12870 IPR006665 OmpA-like domain ISU55_12870 IPR006690 Outer membrane protein, OmpA-like, conserved site ISU55_12870 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_12870 IPR036737 OmpA-like domain superfamily ISU55_12870 IPR000498 Outer membrane protein OmpA-like, transmembrane domain ISU55_12875 IPR002686 Transposase IS200-like ISU55_12875 IPR036515 Transposase IS200-like superfamily ISU55_12880 IPR035087 MatP, N-terminal ISU55_12880 IPR035375 MatP, C-terminal ribbon-helix-helix domain ISU55_12880 IPR013321 Arc-type ribbon-helix-helix ISU55_12880 IPR009390 Macrodomain Ter protein, MatP ISU55_12880 IPR038339 MatP, N-terminal domain superfamily ISU55_12885 IPR008269 Peptidase S16, Lon proteolytic domain ISU55_12885 IPR041699 Lon protease, AAA domain ISU55_12885 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_12885 IPR027065 Lon protease ISU55_12885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_12890 IPR029069 HotDog domain superfamily ISU55_12890 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ISU55_12890 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA ISU55_12905 IPR012337 Ribonuclease H-like superfamily ISU55_12905 IPR036397 Ribonuclease H superfamily ISU55_12905 IPR006120 Resolvase, HTH domain ISU55_12905 IPR001584 Integrase, catalytic core ISU55_12905 IPR017894 HTH domain, IS21 transposase-type ISU55_12910 IPR001270 ClpA/B family ISU55_12910 IPR002611 IstB-like ATP-binding protein ISU55_12910 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12910 IPR003593 AAA+ ATPase domain ISU55_12910 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_12920 IPR002686 Transposase IS200-like ISU55_12920 IPR036515 Transposase IS200-like superfamily ISU55_12925 IPR023200 Ribosome modulation factor domain superfamily ISU55_12925 IPR007040 Ribosome modulation factor ISU55_12930 IPR005586 ABC-type transport auxiliary lipoprotein component ISU55_12935 IPR003399 Mce/MlaD ISU55_12940 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type ISU55_12940 IPR007498 Intermembrane transport protein PqiA-like ISU55_12945 IPR003593 AAA+ ATPase domain ISU55_12945 IPR003439 ABC transporter-like ISU55_12945 IPR017871 ABC transporter, conserved site ISU55_12945 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ISU55_12945 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_12945 IPR032781 ABC-transporter extension domain ISU55_12945 IPR032524 ABC transporter Uup, C-terminal ISU55_12950 IPR019614 S-adenosylmethionine-dependent methyltransferase ISU55_12950 IPR000241 Putative RNA methylase domain ISU55_12950 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_12950 IPR017244 Ribosomal RNA large subunit methyltransferase K/L ISU55_12950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_12950 IPR004114 THUMP domain ISU55_12955 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_12955 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_12955 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site ISU55_12955 IPR005302 Molybdenum cofactor sulfurase, C-terminal ISU55_12955 IPR005303 MOSC, N-terminal beta barrel ISU55_12955 IPR011037 Pyruvate kinase-like, insert domain superfamily ISU55_12955 IPR012675 Beta-grasp domain superfamily ISU55_12960 IPR009809 Cell division protein ZapC ISU55_12965 IPR013785 Aldolase-type TIM barrel ISU55_12965 IPR005720 Dihydroorotate dehydrogenase domain ISU55_12965 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 ISU55_12965 IPR001295 Dihydroorotate dehydrogenase, conserved site ISU55_12965 IPR005719 Dihydroorotate dehydrogenase, class 2 ISU55_12970 IPR042097 Aminopeptidase N-like , N-terminal ISU55_12970 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily ISU55_12970 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase ISU55_12970 IPR014782 Peptidase M1, membrane alanine aminopeptidase ISU55_12970 IPR012779 Peptidase M1, alanyl aminopeptidase ISU55_12970 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily ISU55_12970 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold ISU55_12970 IPR027268 Peptidase M4/M1, CTD superfamily ISU55_12970 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal ISU55_12975 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase ISU55_12975 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain ISU55_12975 IPR006406 Nicotinate phosphoribosyltransferase ISU55_12975 IPR007229 Nicotinate phosphoribosyltransferase family ISU55_12975 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal ISU55_12980 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ISU55_12980 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_12980 IPR012340 Nucleic acid-binding, OB-fold ISU55_12980 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ISU55_12980 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb ISU55_12980 IPR004522 Asparagine-tRNA ligase ISU55_12985 IPR033900 Porin domain, Gram-negative type ISU55_12985 IPR001897 Porin, gammaproteobacterial ISU55_12985 IPR001702 Porin, Gram-negative type ISU55_12985 IPR013793 Porin, Gram-negative type, conserved site ISU55_12985 IPR023614 Porin domain superfamily ISU55_12990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_12990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_12990 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_12990 IPR000796 Aspartate/other aminotransferase ISU55_12990 IPR004839 Aminotransferase, class I/classII ISU55_12990 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ISU55_13000 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ISU55_13000 IPR001279 Metallo-beta-lactamase ISU55_13005 IPR010275 Protein of unknown function DUF882 ISU55_13005 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ISU55_13005 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_13010 IPR005490 L,D-transpeptidase catalytic domain ISU55_13010 IPR002477 Peptidoglycan binding-like ISU55_13010 IPR038063 L,D-transpeptidase catalytic domain-like ISU55_13010 IPR036365 PGBD-like superfamily ISU55_13015 IPR036515 Transposase IS200-like superfamily ISU55_13015 IPR002686 Transposase IS200-like ISU55_13020 IPR012090 Chromosome partition protein MukB ISU55_13020 IPR032520 MukB, hinge domain ISU55_13020 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13020 IPR007406 MukB, N-terminal domain ISU55_13025 IPR042037 MukE, C-terminal domain ISU55_13025 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE ISU55_13025 IPR042038 MukE, N-terminal domain ISU55_13030 IPR036390 Winged helix DNA-binding domain superfamily ISU55_13030 IPR005582 Chromosome partition protein MukF ISU55_13030 IPR010916 TonB box, conserved site ISU55_13030 IPR033441 Chromosome partition protein MukF, C-terminal domain ISU55_13030 IPR033439 Chromosome partition protein MukF, winged-helix domain ISU55_13030 IPR036141 MukF, middle domain superfamily ISU55_13030 IPR033440 Chromosome partition protein MukF, middle domain ISU55_13030 IPR038198 MukF, C-terminal domain superfamily ISU55_13030 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13035 IPR025714 Methyltransferase domain ISU55_13035 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase ISU55_13035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_13040 IPR002575 Aminoglycoside phosphotransferase ISU55_13040 IPR011009 Protein kinase-like domain superfamily ISU55_13045 IPR003329 Acylneuraminate cytidylyltransferase ISU55_13045 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase ISU55_13045 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_13050 IPR005651 Trm112-like ISU55_13055 IPR012156 Cold shock, CspA ISU55_13055 IPR012340 Nucleic acid-binding, OB-fold ISU55_13055 IPR002059 Cold-shock protein, DNA-binding ISU55_13055 IPR019844 Cold-shock (CSD) domain ISU55_13055 IPR011129 Cold shock domain ISU55_13060 IPR009770 Domain of unknown function DUF1338 ISU55_13065 IPR003758 Tetraacyldisaccharide 4'-kinase ISU55_13065 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13070 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_13070 IPR011527 ABC transporter type 1, transmembrane domain ISU55_13070 IPR003593 AAA+ ATPase domain ISU55_13070 IPR039421 Type I protein exporter ISU55_13070 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13070 IPR003439 ABC transporter-like ISU55_13070 IPR017871 ABC transporter, conserved site ISU55_13070 IPR011917 ABC transporter, lipid A export, MsbA ISU55_13075 IPR035681 ComA-like, MBL domain ISU55_13075 IPR004797 Competence protein ComEC/Rec2 ISU55_13075 IPR001279 Metallo-beta-lactamase ISU55_13075 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ISU55_13075 IPR004477 ComEC/Rec2-related protein ISU55_13080 IPR005685 Integration host factor, beta subunit ISU55_13080 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ISU55_13080 IPR000119 Histone-like DNA-binding protein ISU55_13080 IPR020816 Histone-like DNA-binding protein, conserved site ISU55_13085 IPR000110 Ribosomal protein S1 ISU55_13085 IPR003029 S1 domain ISU55_13085 IPR012340 Nucleic acid-binding, OB-fold ISU55_13085 IPR022967 RNA-binding domain, S1 ISU55_13090 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13090 IPR011994 Cytidylate kinase domain ISU55_13090 IPR003136 Cytidylate kinase ISU55_13095 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta ISU55_13095 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site ISU55_13095 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase ISU55_13095 IPR036968 Enolpyruvate transferase domain superfamily ISU55_13095 IPR001986 Enolpyruvate transferase domain ISU55_13100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_13100 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ISU55_13100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_13100 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_13100 IPR022278 Phosphoserine aminotransferase ISU55_13100 IPR000192 Aminotransferase class V domain ISU55_13110 IPR008640 Head domain of trimeric autotransporter adhesin ISU55_13110 IPR011049 Serralysin-like metalloprotease, C-terminal ISU55_13110 IPR005594 YadA-like, C-terminal ISU55_13110 IPR008640 Head domain of trimeric autotransporter adhesin ISU55_13110 IPR008635 Coiled stalk of trimeric autotransporter adhesin ISU55_13110 IPR024973 ESPR domain ISU55_13110 IPR011049 Serralysin-like metalloprotease, C-terminal ISU55_13110 IPR008635 Coiled stalk of trimeric autotransporter adhesin ISU55_13110 IPR024973 ESPR domain ISU55_13110 IPR005594 YadA-like, C-terminal ISU55_13115 IPR027475 Asparaginase/glutaminase, active site 2 ISU55_13115 IPR040919 Asparaginase/glutaminase, C-terminal ISU55_13115 IPR027473 L-asparaginase, C-terminal ISU55_13115 IPR027474 L-asparaginase, N-terminal ISU55_13115 IPR020827 Asparaginase/glutaminase, active site 1 ISU55_13115 IPR006034 Asparaginase/glutaminase-like ISU55_13115 IPR037152 L-asparaginase, N-terminal domain superfamily ISU55_13115 IPR004550 L-asparaginase, type II ISU55_13115 IPR036152 Asparaginase/glutaminase-like superfamily ISU55_13120 IPR041080 YcaO cyclodehydratase, C-terminal ISU55_13120 IPR003776 YcaO-like domain ISU55_13125 IPR000292 Formate/nitrite transporter ISU55_13125 IPR023999 Formate transporter FocA, putative ISU55_13125 IPR023271 Aquaporin-like ISU55_13125 IPR024002 Formate/nitrite transporter, conserved site ISU55_13130 IPR004184 Pyruvate formate lyase domain ISU55_13130 IPR001150 Glycine radical domain ISU55_13130 IPR005949 Formate acetyltransferase ISU55_13130 IPR019777 Formate C-acetyltransferase glycine radical, conserved site ISU55_13140 IPR007197 Radical SAM ISU55_13140 IPR034457 Organic radical-activating enzymes ISU55_13140 IPR001989 Radical-activating enzyme, conserved site ISU55_13140 IPR034465 Pyruvate formate-lyase activase ISU55_13140 IPR012838 Pyruvate formate-lyase 1 activating enzyme ISU55_13140 IPR013785 Aldolase-type TIM barrel ISU55_13140 IPR012839 Organic radical enzyme activase ISU55_13150 IPR012337 Ribonuclease H-like superfamily ISU55_13150 IPR036397 Ribonuclease H superfamily ISU55_13150 IPR001584 Integrase, catalytic core ISU55_13150 IPR017894 HTH domain, IS21 transposase-type ISU55_13150 IPR006120 Resolvase, HTH domain ISU55_13155 IPR003593 AAA+ ATPase domain ISU55_13155 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_13155 IPR001270 ClpA/B family ISU55_13155 IPR002611 IstB-like ATP-binding protein ISU55_13155 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13165 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ISU55_13165 IPR033729 Serine-tRNA ligase catalytic core domain ISU55_13165 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily ISU55_13165 IPR015866 Serine-tRNA synthetase, type1, N-terminal ISU55_13165 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ISU55_13165 IPR002317 Serine-tRNA ligase, type1 ISU55_13165 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_13170 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ISU55_13170 IPR003593 AAA+ ATPase domain ISU55_13170 IPR003959 ATPase, AAA-type, core ISU55_13170 IPR021886 MgsA AAA+ ATPase C-terminal ISU55_13170 IPR032423 AAA C-terminal domain ISU55_13170 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13175 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria ISU55_13175 IPR004564 Outer membrane lipoprotein carrier protein LolA-like ISU55_13175 IPR029046 Lipoprotein localisation LolA/LolB/LppX ISU55_13180 IPR041027 FtsK alpha domain ISU55_13180 IPR002543 FtsK domain ISU55_13180 IPR018541 FtsK gamma domain ISU55_13180 IPR025199 DNA translocase FtsK, 4TM region ISU55_13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13180 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13180 IPR036390 Winged helix DNA-binding domain superfamily ISU55_13185 IPR011991 ArsR-like helix-turn-helix domain ISU55_13185 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ISU55_13185 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13185 IPR036390 Winged helix DNA-binding domain superfamily ISU55_13185 IPR019888 Transcription regulator AsnC-type ISU55_13185 IPR011008 Dimeric alpha-beta barrel ISU55_13185 IPR000485 AsnC-type HTH domain ISU55_13185 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ISU55_13190 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site ISU55_13190 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_13190 IPR005982 Thioredoxin reductase ISU55_13190 IPR023753 FAD/NAD(P)-binding domain ISU55_13195 IPR011527 ABC transporter type 1, transmembrane domain ISU55_13195 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13195 IPR003439 ABC transporter-like ISU55_13195 IPR017871 ABC transporter, conserved site ISU55_13195 IPR039421 Type I protein exporter ISU55_13195 IPR003593 AAA+ ATPase domain ISU55_13195 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_13195 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD ISU55_13200 IPR003439 ABC transporter-like ISU55_13200 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC ISU55_13200 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_13200 IPR011527 ABC transporter type 1, transmembrane domain ISU55_13200 IPR003593 AAA+ ATPase domain ISU55_13200 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13200 IPR017871 ABC transporter, conserved site ISU55_13205 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal ISU55_13205 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase ISU55_13205 IPR016181 Acyl-CoA N-acyltransferase ISU55_13210 IPR004368 Translation initiation factor IF-1 ISU55_13210 IPR022967 RNA-binding domain, S1 ISU55_13210 IPR006196 RNA-binding domain, S1, IF1 type ISU55_13210 IPR012340 Nucleic acid-binding, OB-fold ISU55_13215 IPR002686 Transposase IS200-like ISU55_13215 IPR036515 Transposase IS200-like superfamily ISU55_13220 IPR036628 Clp, N-terminal domain superfamily ISU55_13220 IPR003959 ATPase, AAA-type, core ISU55_13220 IPR019489 Clp ATPase, C-terminal ISU55_13220 IPR003593 AAA+ ATPase domain ISU55_13220 IPR004176 Clp, N-terminal ISU55_13220 IPR041546 ClpA/ClpB, AAA lid domain ISU55_13220 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13220 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA ISU55_13220 IPR001270 ClpA/B family ISU55_13220 IPR028299 ClpA/B, conserved site 2 ISU55_13220 IPR018368 ClpA/B, conserved site 1 ISU55_13225 IPR022935 ATP-dependent Clp protease adaptor protein ClpS ISU55_13225 IPR003769 Adaptor protein ClpS, core ISU55_13225 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ISU55_13230 IPR011129 Cold shock domain ISU55_13230 IPR012340 Nucleic acid-binding, OB-fold ISU55_13230 IPR012751 CspD, cold shock ISU55_13230 IPR012156 Cold shock, CspA ISU55_13230 IPR019844 Cold-shock (CSD) domain ISU55_13230 IPR002059 Cold-shock protein, DNA-binding ISU55_13235 IPR003439 ABC transporter-like ISU55_13235 IPR003838 ABC transporter permease protein domain ISU55_13235 IPR003593 AAA+ ATPase domain ISU55_13235 IPR017871 ABC transporter, conserved site ISU55_13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13235 IPR025857 MacB-like periplasmic core domain ISU55_13235 IPR017911 ABC transporter, macrolide export, ATP-binding domain ISU55_13240 IPR030190 Macrolide export protein MacA ISU55_13240 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_13240 IPR006143 RND efflux pump, membrane fusion protein ISU55_13245 IPR007488 Protein of unknown function DUF535 ISU55_13250 IPR006171 TOPRIM domain ISU55_13250 IPR022602 Protein of unknown function DUF2813 ISU55_13250 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13250 IPR034139 OLD protein-like, TOPRIM domain ISU55_13255 IPR005642 Lysine exporter LysO ISU55_13260 IPR010048 Hydroxylamine reductase ISU55_13260 IPR016099 Prismane-like, alpha/beta-sandwich ISU55_13260 IPR016100 Prismane, alpha-bundle ISU55_13260 IPR011254 Prismane-like superfamily ISU55_13260 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase ISU55_13265 IPR017938 Riboflavin synthase-like beta-barrel ISU55_13265 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_13265 IPR000951 Phthalate dioxygenase reductase ISU55_13265 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_13265 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_13265 IPR012675 Beta-grasp domain superfamily ISU55_13265 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ISU55_13265 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_13265 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_13270 IPR000399 TPP-binding enzyme, conserved site ISU55_13270 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ISU55_13270 IPR029035 DHS-like NAD/FAD-binding domain superfamily ISU55_13270 IPR029061 Thiamin diphosphate-binding fold ISU55_13270 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ISU55_13270 IPR012000 Thiamine pyrophosphate enzyme, central domain ISU55_13280 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_13280 IPR023603 Threonine aldolase ISU55_13280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_13280 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase ISU55_13280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_13285 IPR016040 NAD(P)-binding domain ISU55_13285 IPR021295 Protein of unknown function DUF2867 ISU55_13285 IPR036291 NAD(P)-binding domain superfamily ISU55_13290 IPR001509 NAD-dependent epimerase/dehydratase ISU55_13290 IPR036291 NAD(P)-binding domain superfamily ISU55_13295 IPR024289 Domain of unknown function DUF3828 ISU55_13300 IPR036263 Chorismate mutase type II superfamily ISU55_13300 IPR002701 Chorismate mutase II, prokaryotic-type ISU55_13300 IPR008240 Chorismate mutase, periplasmic ISU55_13305 IPR017871 ABC transporter, conserved site ISU55_13305 IPR003439 ABC transporter-like ISU55_13305 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ISU55_13305 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13305 IPR003593 AAA+ ATPase domain ISU55_13310 IPR018313 Solute-binding protein family 3, conserved site ISU55_13310 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter ISU55_13310 IPR001320 Ionotropic glutamate receptor ISU55_13310 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_13315 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_13315 IPR035906 MetI-like superfamily ISU55_13315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_13320 IPR035906 MetI-like superfamily ISU55_13320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_13320 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_13330 IPR000620 EamA domain ISU55_13335 IPR016935 Opine metallophore dehydrogenase ISU55_13335 IPR036291 NAD(P)-binding domain superfamily ISU55_13340 IPR036291 NAD(P)-binding domain superfamily ISU55_13340 IPR004298 Nicotianamine synthase ISU55_13345 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13345 IPR017871 ABC transporter, conserved site ISU55_13345 IPR003439 ABC transporter-like ISU55_13345 IPR003593 AAA+ ATPase domain ISU55_13350 IPR037294 ABC transporter, BtuC-like ISU55_13350 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_13355 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_13355 IPR037294 ABC transporter, BtuC-like ISU55_13380 IPR001320 Ionotropic glutamate receptor ISU55_13380 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter ISU55_13380 IPR018313 Solute-binding protein family 3, conserved site ISU55_13380 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_13385 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC ISU55_13385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_13385 IPR030391 RNA methyltransferase TrmA, conserved site ISU55_13385 IPR030390 RNA methyltransferase TrmA, active site ISU55_13385 IPR010280 (Uracil-5)-methyltransferase family ISU55_13390 IPR019703 Protein of unknown function DUF2593 ISU55_13395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_13395 IPR035906 MetI-like superfamily ISU55_13400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_13400 IPR035906 MetI-like superfamily ISU55_13405 IPR013611 Transport-associated OB, type 2 ISU55_13405 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_13405 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit ISU55_13405 IPR003593 AAA+ ATPase domain ISU55_13405 IPR003439 ABC transporter-like ISU55_13405 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13405 IPR017871 ABC transporter, conserved site ISU55_13410 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein ISU55_13410 IPR006059 Bacterial extracellular solute-binding protein ISU55_13415 IPR019660 Putative sensory transduction regulator YbjN ISU55_13420 IPR010815 Protein of unknown function DUF1418 ISU55_13425 IPR011902 Glutaredoxin, GrxA ISU55_13425 IPR014025 Glutaredoxin subgroup ISU55_13425 IPR002109 Glutaredoxin ISU55_13425 IPR011767 Glutaredoxin active site ISU55_13425 IPR036249 Thioredoxin-like superfamily ISU55_13430 IPR006512 YidE/YbjL duplication ISU55_13430 IPR006037 Regulator of K+ conductance, C-terminal ISU55_13430 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ISU55_13430 IPR023017 Transport protein YbjL, putative ISU55_13440 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ISU55_13440 IPR033879 Undecaprenyl-diphosphatase ISU55_13440 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ISU55_13445 IPR011343 Deoxyribose-phosphate aldolase ISU55_13445 IPR013785 Aldolase-type TIM barrel ISU55_13445 IPR028581 Deoxyribose-phosphate aldolase type I ISU55_13445 IPR002915 DeoC/FbaB/ lacD aldolase ISU55_13450 IPR037171 NagB/RpiA transferase-like ISU55_13450 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ISU55_13450 IPR001034 DeoR-type HTH domain ISU55_13450 IPR014036 DeoR C-terminal sensor domain ISU55_13455 IPR004694 Hydroxy amino acid transporter ISU55_13460 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal ISU55_13460 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily ISU55_13460 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal ISU55_13460 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A ISU55_13460 IPR015956 Penicillin-binding protein, C-terminal domain superfamily ISU55_13460 IPR012338 Beta-lactamase/transpeptidase-like ISU55_13465 IPR035906 MetI-like superfamily ISU55_13465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_13470 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13470 IPR026253 Methionine import ATP-binding protein MetN ISU55_13470 IPR003439 ABC transporter-like ISU55_13470 IPR017871 ABC transporter, conserved site ISU55_13470 IPR018449 NIL domain ISU55_13470 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ISU55_13470 IPR003593 AAA+ ATPase domain ISU55_13470 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ISU55_13475 IPR004872 Lipoprotein NlpA family ISU55_13485 IPR036412 HAD-like superfamily ISU55_13485 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like ISU55_13485 IPR023214 HAD superfamily ISU55_13490 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ISU55_13490 IPR004045 Glutathione S-transferase, N-terminal ISU55_13490 IPR004046 Glutathione S-transferase, C-terminal ISU55_13490 IPR036249 Thioredoxin-like superfamily ISU55_13490 IPR010987 Glutathione S-transferase, C-terminal-like ISU55_13495 IPR010917 TonB-dependent receptor, conserved site ISU55_13495 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_13495 IPR010916 TonB box, conserved site ISU55_13495 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_13495 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_13495 IPR012910 TonB-dependent receptor, plug domain ISU55_13495 IPR039426 Vitamin B12 transporter BtuB-like ISU55_13500 IPR015863 ABC transporter, hemin import, HmuV ISU55_13500 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13500 IPR003439 ABC transporter-like ISU55_13500 IPR003593 AAA+ ATPase domain ISU55_13505 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_13505 IPR037294 ABC transporter, BtuC-like ISU55_13515 IPR004841 Amino acid permease/ SLC12A domain ISU55_13515 IPR004840 Amino acid permease, conserved site ISU55_13520 IPR000847 Transcription regulator HTH, LysR ISU55_13520 IPR005119 LysR, substrate-binding ISU55_13520 IPR036390 Winged helix DNA-binding domain superfamily ISU55_13520 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13525 IPR018383 Uncharacterised protein family UPF0324, prokaryote ISU55_13525 IPR004630 Uncharacterised protein family UPF0324, bacteria ISU55_13530 IPR018246 AP endonuclease 2, zinc binding site ISU55_13530 IPR013022 Xylose isomerase-like, TIM barrel domain ISU55_13530 IPR001719 AP endonuclease 2 ISU55_13530 IPR036237 Xylose isomerase-like superfamily ISU55_13535 IPR018030 Fimbrial membrane usher, conserved site ISU55_13535 IPR000015 Outer membrane usher protein ISU55_13535 IPR042186 Outer membrane usher protein FimD, plug domain ISU55_13535 IPR025949 PapC-like, C-terminal domain ISU55_13535 IPR025885 PapC, N-terminal domain ISU55_13535 IPR037224 PapC, N-terminal domain superfamily ISU55_13540 IPR018046 Pili assembly chaperone, conserved site ISU55_13540 IPR016148 Pili assembly chaperone, C-terminal ISU55_13540 IPR013783 Immunoglobulin-like fold ISU55_13540 IPR008962 PapD-like superfamily ISU55_13540 IPR001829 Pili assembly chaperone, bacterial ISU55_13540 IPR016147 Pili assembly chaperone, N-terminal ISU55_13540 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_13550 IPR035182 Protein of unknown function PsaF ISU55_13555 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_13555 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13555 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_13560 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ISU55_13560 IPR036095 PTS system IIB component-like superfamily ISU55_13560 IPR006327 Phosphotransferase system, fructose IIC component ISU55_13560 IPR013011 Phosphotransferase system, EIIB component, type 2 ISU55_13560 IPR003353 Phosphotransferase system, fructose-specific IIB subunit ISU55_13560 IPR003352 Phosphotransferase system, EIIC ISU55_13560 IPR013014 Phosphotransferase system, EIIC component, type 2 ISU55_13565 IPR022463 Fructose 1-phosphate kinase ISU55_13565 IPR017583 Tagatose/fructose phosphokinase ISU55_13565 IPR029056 Ribokinase-like ISU55_13565 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_13565 IPR011611 Carbohydrate kinase PfkB ISU55_13570 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ISU55_13570 IPR035895 HPr-like superfamily ISU55_13570 IPR016152 Phosphotransferase/anion transporter ISU55_13570 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ISU55_13570 IPR000032 Phosphocarrier protein HPr-like ISU55_13570 IPR002178 PTS EIIA type-2 domain ISU55_13575 IPR020476 NUDIX hydrolase ISU55_13575 IPR020084 NUDIX hydrolase, conserved site ISU55_13575 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_13575 IPR000086 NUDIX hydrolase domain ISU55_13580 IPR001851 ABC transporter, permease ISU55_13585 IPR003439 ABC transporter-like ISU55_13585 IPR003593 AAA+ ATPase domain ISU55_13585 IPR017871 ABC transporter, conserved site ISU55_13585 IPR015861 ABC transporter, ribose import, RbsA ISU55_13585 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13595 IPR037171 NagB/RpiA transferase-like ISU55_13595 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup ISU55_13595 IPR004788 Ribose 5-phosphate isomerase, type A ISU55_13600 IPR006000 Xylulokinase ISU55_13600 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_13600 IPR018483 Carbohydrate kinase, FGGY, conserved site ISU55_13600 IPR000577 Carbohydrate kinase, FGGY ISU55_13600 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_13605 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_13605 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ISU55_13605 IPR016163 Aldehyde dehydrogenase, C-terminal ISU55_13605 IPR010102 Succinate semialdehyde dehydrogenase ISU55_13605 IPR015590 Aldehyde dehydrogenase domain ISU55_13605 IPR016162 Aldehyde dehydrogenase, N-terminal ISU55_13605 IPR016160 Aldehyde dehydrogenase, cysteine active site ISU55_13615 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ISU55_13615 IPR006236 D-3-phosphoglycerate dehydrogenase ISU55_13615 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU55_13615 IPR036291 NAD(P)-binding domain superfamily ISU55_13615 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ISU55_13615 IPR029009 Allosteric substrate binding domain superfamily ISU55_13615 IPR002912 ACT domain ISU55_13615 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ISU55_13620 IPR036291 NAD(P)-binding domain superfamily ISU55_13620 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_13620 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_13625 IPR005358 Putative zinc- or iron-chelating domain containing protein ISU55_13630 IPR013059 Tryptophan/tyrosine transporter ISU55_13630 IPR018227 Amino acid/polyamine transporter 2 ISU55_13635 IPR001059 Translation elongation factor P/YeiP, central ISU55_13635 IPR013185 Translation elongation factor, KOW-like ISU55_13635 IPR020599 Translation elongation factor P/YeiP ISU55_13635 IPR014722 Ribosomal protein L2, domain 2 ISU55_13635 IPR012340 Nucleic acid-binding, OB-fold ISU55_13635 IPR011897 Translation elongation factor P-like, YeiP ISU55_13635 IPR013852 Translation elongation factor P/YeiP, conserved site ISU55_13635 IPR008991 Translation protein SH3-like domain superfamily ISU55_13635 IPR015365 Elongation factor P, C-terminal ISU55_13640 IPR036237 Xylose isomerase-like superfamily ISU55_13640 IPR004628 Mannonate dehydratase ISU55_13645 IPR036291 NAD(P)-binding domain superfamily ISU55_13645 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_13645 IPR013118 Mannitol dehydrogenase, C-terminal ISU55_13645 IPR000669 Mannitol dehydrogenase ISU55_13645 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_13645 IPR013131 Mannitol dehydrogenase, N-terminal ISU55_13645 IPR023027 Mannitol dehydrogenase, conserved site ISU55_13650 IPR000524 Transcription regulator HTH, GntR ISU55_13650 IPR008920 Transcription regulator FadR/GntR, C-terminal ISU55_13650 IPR011711 GntR, C-terminal ISU55_13650 IPR036390 Winged helix DNA-binding domain superfamily ISU55_13650 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13655 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13655 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ISU55_13655 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ISU55_13660 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ISU55_13660 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ISU55_13660 IPR032908 Lipid A 1-diphosphate synthase ISU55_13665 IPR038765 Papain-like cysteine peptidase superfamily ISU55_13665 IPR000064 Endopeptidase, NLPC/P60 domain ISU55_13670 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain ISU55_13670 IPR001633 EAL domain ISU55_13670 IPR035919 EAL domain superfamily ISU55_13675 IPR030678 Peptide/nickel binding protein, MppA-type ISU55_13675 IPR039424 Solute-binding protein family 5 ISU55_13675 IPR000914 Solute-binding protein family 5 domain ISU55_13680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_13680 IPR035906 MetI-like superfamily ISU55_13685 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ISU55_13685 IPR035906 MetI-like superfamily ISU55_13685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_13690 IPR003439 ABC transporter-like ISU55_13690 IPR017871 ABC transporter, conserved site ISU55_13690 IPR003593 AAA+ ATPase domain ISU55_13690 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13690 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_13695 IPR020489 Uncharacterised protein family YejG ISU55_13700 IPR020846 Major facilitator superfamily domain ISU55_13700 IPR004812 Drug resistance transporter Bcr/CmlA subfamily ISU55_13700 IPR004734 Multidrug resistance protein ISU55_13700 IPR036259 MFS transporter superfamily ISU55_13700 IPR011701 Major facilitator superfamily ISU55_13705 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ISU55_13705 IPR002942 RNA-binding S4 domain ISU55_13705 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_13705 IPR036986 RNA-binding S4 domain superfamily ISU55_13705 IPR006145 Pseudouridine synthase, RsuA/RluA ISU55_13705 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain ISU55_13705 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ISU55_13710 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_13710 IPR001650 Helicase, C-terminal ISU55_13710 IPR011332 Zinc-binding ribosomal protein ISU55_13710 IPR006935 Helicase/UvrB, N-terminal ISU55_13710 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_13715 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily ISU55_13715 IPR029751 Ribosomal protein L25 ISU55_13715 IPR020055 Ribosomal protein L25, short-form ISU55_13715 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal ISU55_13720 IPR002686 Transposase IS200-like ISU55_13720 IPR036515 Transposase IS200-like superfamily ISU55_13725 IPR007358 Nucleoid-associated protein NdpA ISU55_13730 IPR009857 Uncharacterised protein family UPF0352 ISU55_13730 IPR023202 YejL-like superfamily ISU55_13735 IPR024588 Inner membrane protein YejM, N-terminal ISU55_13735 IPR012159 Inner membrane protein YejM ISU55_13735 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_13735 IPR000917 Sulfatase, N-terminal ISU55_13750 IPR036624 Hcp1-like superfamily ISU55_13750 IPR003615 HNH nuclease ISU55_13750 IPR008514 Type VI secretion system effector, Hcp ISU55_13770 IPR018120 Glycoside hydrolase family 1, active site ISU55_13770 IPR001360 Glycoside hydrolase family 1 ISU55_13770 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site ISU55_13770 IPR017853 Glycoside hydrolase superfamily ISU55_13775 IPR009057 Homeobox-like domain superfamily ISU55_13775 IPR000281 Helix-turn-helix protein RpiR ISU55_13775 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13775 IPR001347 Sugar isomerase (SIS) ISU55_13775 IPR035472 RpiR-like, SIS domain ISU55_13780 IPR011083 Phage tail collar domain ISU55_13780 IPR037053 Phage tail collar domain superfamily ISU55_13795 IPR006949 Baseplate protein J-like ISU55_13835 IPR020287 Tail sheath protein, C-terminal domain ISU55_13835 IPR035089 Tail sheath protein, subtilisin-like domain ISU55_13835 IPR007067 Tail sheath protein ISU55_13855 IPR013022 Xylose isomerase-like, TIM barrel domain ISU55_13855 IPR026040 Hydroxypyruvate isomerase-like ISU55_13855 IPR036237 Xylose isomerase-like superfamily ISU55_13860 IPR036390 Winged helix DNA-binding domain superfamily ISU55_13860 IPR014036 DeoR C-terminal sensor domain ISU55_13860 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ISU55_13860 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13860 IPR037171 NagB/RpiA transferase-like ISU55_13860 IPR001034 DeoR-type HTH domain ISU55_13870 IPR031475 Nucleotide-binding C-terminal domain ISU55_13870 IPR010737 Four-carbon acid sugar kinase, N-terminal domain ISU55_13870 IPR042213 Nucleotide-binding, C-terminal domain superfamily ISU55_13870 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily ISU55_13875 IPR010534 Bacteriophage 933W, GpQ ISU55_13880 IPR001387 Cro/C1-type helix-turn-helix domain ISU55_13880 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_13880 IPR039418 LexA-like ISU55_13880 IPR015927 Peptidase S24/S26A/S26B/S26C ISU55_13880 IPR036286 LexA/Signal peptidase-like superfamily ISU55_13885 IPR010391 DNA damage-inducible protein DinI-like ISU55_13885 IPR036687 DinI-like superfamily ISU55_13890 IPR000036 Peptidase A26, omptin ISU55_13890 IPR020079 Peptidase A26, omptin, conserved site ISU55_13890 IPR020080 Outer membrane adhesin/peptidase omptin ISU55_13895 IPR004090 Chemotaxis methyl-accepting receptor ISU55_13895 IPR000727 Target SNARE coiled-coil homology domain ISU55_13895 IPR033479 Double Cache domain 1 ISU55_13895 IPR003660 HAMP domain ISU55_13895 IPR029151 Periplasmic sensor-like domain superfamily ISU55_13895 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU55_13900 IPR001279 Metallo-beta-lactamase ISU55_13900 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ISU55_13900 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D ISU55_13905 IPR018043 Sodium:galactoside symporter, conserved site ISU55_13905 IPR001927 Sodium:galactoside symporter ISU55_13905 IPR036259 MFS transporter superfamily ISU55_13905 IPR039672 Lactose permease-like ISU55_13910 IPR001466 Beta-lactamase-related ISU55_13910 IPR012338 Beta-lactamase/transpeptidase-like ISU55_13925 IPR036515 Transposase IS200-like superfamily ISU55_13925 IPR002686 Transposase IS200-like ISU55_13930 IPR023614 Porin domain superfamily ISU55_13930 IPR001897 Porin, gammaproteobacterial ISU55_13930 IPR013793 Porin, Gram-negative type, conserved site ISU55_13930 IPR001702 Porin, Gram-negative type ISU55_13935 IPR020846 Major facilitator superfamily domain ISU55_13935 IPR036259 MFS transporter superfamily ISU55_13935 IPR011701 Major facilitator superfamily ISU55_13940 IPR036641 HPT domain superfamily ISU55_13940 IPR005467 Histidine kinase domain ISU55_13940 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_13940 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain ISU55_13940 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ISU55_13940 IPR030861 Phosphotransferase RcsD ISU55_13940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_13940 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily ISU55_13945 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily ISU55_13945 IPR036641 HPT domain superfamily ISU55_13945 IPR005467 Histidine kinase domain ISU55_13945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_13945 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ISU55_13945 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_13945 IPR030861 Phosphotransferase RcsD ISU55_13945 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain ISU55_13950 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_13950 IPR011006 CheY-like superfamily ISU55_13950 IPR000792 Transcription regulator LuxR, C-terminal ISU55_13950 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_13950 IPR030864 Transcriptional regulatory protein RcsB ISU55_13950 IPR001789 Signal transduction response regulator, receiver domain ISU55_13955 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_13955 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_13955 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_13955 IPR005467 Histidine kinase domain ISU55_13955 IPR038388 RcsC, C-terminal domain superfamily ISU55_13955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_13955 IPR030856 Sensor histidine kinase RcsC ISU55_13955 IPR001789 Signal transduction response regulator, receiver domain ISU55_13955 IPR011006 CheY-like superfamily ISU55_13955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_13955 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal ISU55_13960 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily ISU55_13960 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ISU55_13960 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal ISU55_13960 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat ISU55_13960 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta ISU55_13960 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ISU55_13960 IPR005743 DNA gyrase, subunit A ISU55_13965 IPR010233 Ubiquinone biosynthesis O-methyltransferase ISU55_13965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_13970 IPR005144 ATP-cone domain ISU55_13970 IPR013346 Ribonucleotide reductase, class I , alpha subunit ISU55_13970 IPR039718 Ribonucleoside-diphosphate reductase large subunit ISU55_13970 IPR013509 Ribonucleotide reductase large subunit, N-terminal ISU55_13970 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal ISU55_13970 IPR000788 Ribonucleotide reductase large subunit, C-terminal ISU55_13975 IPR012348 Ribonucleotide reductase-like ISU55_13975 IPR033909 Ribonucleotide reductase small subunit ISU55_13975 IPR030475 Ribonucleotide reductase small subunit, acitve site ISU55_13975 IPR000358 Ribonucleotide reductase small subunit family ISU55_13975 IPR009078 Ferritin-like superfamily ISU55_13980 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site ISU55_13980 IPR012675 Beta-grasp domain superfamily ISU55_13980 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_13980 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_13985 IPR036198 Ecotin superfamily ISU55_13985 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria ISU55_13985 IPR005658 Proteinase inhibitor I11, ecotin ISU55_13990 IPR036653 CinA-like, C-terminal ISU55_13990 IPR036425 MoaB/Mog-like domain superfamily ISU55_13990 IPR001453 MoaB/Mog domain ISU55_13990 IPR008135 Competence-induced protein CinA ISU55_13995 IPR018227 Amino acid/polyamine transporter 2 ISU55_13995 IPR013061 Tryptophan/tryrosine permease, conserved site ISU55_13995 IPR013059 Tryptophan/tyrosine transporter ISU55_14000 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_14000 IPR023614 Porin domain superfamily ISU55_14000 IPR009998 YfaZ ISU55_14005 IPR002226 Catalase haem-binding site ISU55_14005 IPR018028 Catalase, mono-functional, haem-containing ISU55_14005 IPR040333 Catalase, clade 3 ISU55_14005 IPR024708 Catalase active site ISU55_14005 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 ISU55_14005 IPR011614 Catalase core domain ISU55_14005 IPR037060 Catalase core domain superfamily ISU55_14005 IPR020835 Catalase superfamily ISU55_14005 IPR010582 Catalase immune-responsive domain ISU55_14010 IPR006555 ATP-dependent helicase, C-terminal ISU55_14010 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14010 IPR001650 Helicase, C-terminal ISU55_14010 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_14010 IPR006554 Helicase-like, DEXD box c2 type ISU55_14010 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type ISU55_14010 IPR039000 ATP-dependent DNA helicase DinG ISU55_14010 IPR010614 DEAD2 ISU55_14015 IPR033900 Porin domain, Gram-negative type ISU55_14015 IPR023614 Porin domain superfamily ISU55_14015 IPR001897 Porin, gammaproteobacterial ISU55_14015 IPR001702 Porin, Gram-negative type ISU55_14015 IPR013793 Porin, Gram-negative type, conserved site ISU55_14020 IPR000620 EamA domain ISU55_14020 IPR004779 Carboxylate/Amino Acid/Amine Transporter ISU55_14030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_14030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_14030 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal ISU55_14030 IPR011193 Ornithine/lysine/arginine decarboxylase ISU55_14030 IPR000310 Orn/Lys/Arg decarboxylase, major domain ISU55_14030 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal ISU55_14030 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_14030 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily ISU55_14035 IPR002293 Amino acid/polyamine transporter I ISU55_14040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_14040 IPR035906 MetI-like superfamily ISU55_14045 IPR003439 ABC transporter-like ISU55_14045 IPR003593 AAA+ ATPase domain ISU55_14045 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14045 IPR017871 ABC transporter, conserved site ISU55_14050 IPR035906 MetI-like superfamily ISU55_14050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_14060 IPR001307 Thiosulphate sulfurtransferase, conserved site ISU55_14060 IPR001763 Rhodanese-like domain ISU55_14060 IPR036873 Rhodanese-like domain superfamily ISU55_14075 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein ISU55_14075 IPR003439 ABC transporter-like ISU55_14075 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14075 IPR017871 ABC transporter, conserved site ISU55_14075 IPR003593 AAA+ ATPase domain ISU55_14080 IPR017871 ABC transporter, conserved site ISU55_14080 IPR005876 Cobalt transport protein ATP-binding subunit ISU55_14080 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14080 IPR003593 AAA+ ATPase domain ISU55_14080 IPR003439 ABC transporter-like ISU55_14085 IPR001851 ABC transporter, permease ISU55_14090 IPR001851 ABC transporter, permease ISU55_14095 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14095 IPR002197 DNA binding HTH domain, Fis-type ISU55_14095 IPR000014 PAS domain ISU55_14095 IPR009057 Homeobox-like domain superfamily ISU55_14095 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_14095 IPR003593 AAA+ ATPase domain ISU55_14095 IPR025944 Sigma-54 interaction domain, conserved site ISU55_14095 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ISU55_14095 IPR028082 Periplasmic binding protein-like I ISU55_14095 IPR002078 RNA polymerase sigma factor 54 interaction domain ISU55_14100 IPR009921 Domain of unknown function DUF1456 ISU55_14105 IPR005769 ABC transporter, permease PhnE/PtxC ISU55_14105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_14105 IPR035906 MetI-like superfamily ISU55_14110 IPR035906 MetI-like superfamily ISU55_14110 IPR005769 ABC transporter, permease PhnE/PtxC ISU55_14110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_14115 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein ISU55_14120 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14120 IPR012693 ABC transporter, phosphonate import, PhnC ISU55_14120 IPR003439 ABC transporter-like ISU55_14120 IPR003593 AAA+ ATPase domain ISU55_14120 IPR017871 ABC transporter, conserved site ISU55_14125 IPR007341 Transglycosylase-associated protein ISU55_14135 IPR002711 HNH endonuclease ISU55_14135 IPR003615 HNH nuclease ISU55_14140 IPR023577 CYTH domain ISU55_14140 IPR033469 CYTH-like domain superfamily ISU55_14140 IPR008173 Adenylyl cyclase CyaB ISU55_14145 IPR016167 FAD-binding, type PCMH, subdomain 1 ISU55_14145 IPR012256 D-lactate dehydrogenase ISU55_14145 IPR006094 FAD linked oxidase, N-terminal ISU55_14145 IPR016166 FAD-binding domain, PCMH-type ISU55_14145 IPR036318 FAD-binding, type PCMH-like superfamily ISU55_14145 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 ISU55_14145 IPR016169 FAD-binding, type PCMH, subdomain 2 ISU55_14145 IPR016164 FAD-linked oxidase-like, C-terminal ISU55_14145 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 ISU55_14145 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal ISU55_14150 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal ISU55_14150 IPR012338 Beta-lactamase/transpeptidase-like ISU55_14150 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A ISU55_14160 IPR035587 DUS-like, FMN-binding domain ISU55_14160 IPR032886 tRNA-dihydrouridine(16) synthase ISU55_14160 IPR013785 Aldolase-type TIM barrel ISU55_14160 IPR018517 tRNA-dihydrouridine synthase, conserved site ISU55_14160 IPR001269 tRNA-dihydrouridine synthase ISU55_14160 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal ISU55_14170 IPR036515 Transposase IS200-like superfamily ISU55_14170 IPR002686 Transposase IS200-like ISU55_14185 IPR001207 Transposase, mutator type ISU55_14220 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14220 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_14220 IPR011545 DEAD/DEAH box helicase domain ISU55_14220 IPR028622 ATP-dependent RNA helicase RhlE ISU55_14220 IPR001650 Helicase, C-terminal ISU55_14220 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ISU55_14220 IPR014014 RNA helicase, DEAD-box type, Q motif ISU55_14225 IPR009057 Homeobox-like domain superfamily ISU55_14225 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ISU55_14225 IPR001647 DNA-binding HTH domain, TetR-type ISU55_14225 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ISU55_14225 IPR015292 Transcription regulator YbiH, C-terminal ISU55_14230 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG ISU55_14230 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_14235 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14235 IPR003593 AAA+ ATPase domain ISU55_14235 IPR003439 ABC transporter-like ISU55_14235 IPR017871 ABC transporter, conserved site ISU55_14240 IPR000412 ABC-2 transporter ISU55_14245 IPR000412 ABC-2 transporter ISU55_14260 IPR000847 Transcription regulator HTH, LysR ISU55_14260 IPR005119 LysR, substrate-binding ISU55_14260 IPR036390 Winged helix DNA-binding domain superfamily ISU55_14260 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_14265 IPR013785 Aldolase-type TIM barrel ISU55_14265 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal ISU55_14270 IPR011006 CheY-like superfamily ISU55_14270 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14270 IPR003593 AAA+ ATPase domain ISU55_14270 IPR025944 Sigma-54 interaction domain, conserved site ISU55_14270 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_14270 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ISU55_14270 IPR002078 RNA polymerase sigma factor 54 interaction domain ISU55_14270 IPR001789 Signal transduction response regulator, receiver domain ISU55_14270 IPR002197 DNA binding HTH domain, Fis-type ISU55_14270 IPR009057 Homeobox-like domain superfamily ISU55_14275 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_14275 IPR005467 Histidine kinase domain ISU55_14275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_14275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_14275 IPR029151 Periplasmic sensor-like domain superfamily ISU55_14275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_14275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_14280 IPR025961 Heavy-metal resistance protein ISU55_14290 IPR002686 Transposase IS200-like ISU55_14290 IPR036515 Transposase IS200-like superfamily ISU55_14300 IPR000845 Nucleoside phosphorylase domain ISU55_14300 IPR035994 Nucleoside phosphorylase superfamily ISU55_14300 IPR011268 Purine nucleoside phosphorylase ISU55_14300 IPR018099 Purine phosphorylase, family 2, conserved site ISU55_14300 IPR010943 Xanthosine phosphorylase ISU55_14310 IPR000847 Transcription regulator HTH, LysR ISU55_14310 IPR005119 LysR, substrate-binding ISU55_14310 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain ISU55_14310 IPR036390 Winged helix DNA-binding domain superfamily ISU55_14310 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_14315 IPR018093 BCCT transporter, conserved site ISU55_14315 IPR000060 BCCT transporter family ISU55_14320 IPR017757 Transcriptional repressor BetI ISU55_14320 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ISU55_14320 IPR001647 DNA-binding HTH domain, TetR-type ISU55_14320 IPR009057 Homeobox-like domain superfamily ISU55_14320 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ISU55_14320 IPR039538 BetI-type transcriptional repressor, C-terminal ISU55_14325 IPR016161 Aldehyde/histidinol dehydrogenase ISU55_14325 IPR016163 Aldehyde dehydrogenase, C-terminal ISU55_14325 IPR016160 Aldehyde dehydrogenase, cysteine active site ISU55_14325 IPR016162 Aldehyde dehydrogenase, N-terminal ISU55_14325 IPR015590 Aldehyde dehydrogenase domain ISU55_14325 IPR011264 Betaine aldehyde dehydrogenase ISU55_14325 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ISU55_14330 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal ISU55_14330 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal ISU55_14330 IPR011533 Oxygen-dependent choline dehydrogenase ISU55_14330 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_14330 IPR027424 Glucose Oxidase, domain 2 ISU55_14330 IPR012132 Glucose-methanol-choline oxidoreductase ISU55_14335 IPR036515 Transposase IS200-like superfamily ISU55_14335 IPR002686 Transposase IS200-like ISU55_14340 IPR006214 Bax inhibitor 1-related ISU55_14345 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily ISU55_14345 IPR003448 Molybdopterin biosynthesis MoaE ISU55_14350 IPR003749 Sulfur carrier ThiS/MoaD-like ISU55_14350 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ISU55_14350 IPR012675 Beta-grasp domain superfamily ISU55_14355 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily ISU55_14355 IPR023045 Molybdenum cofactor biosynthesis C ISU55_14355 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain ISU55_14360 IPR010505 Molybdenum cofactor synthesis C-terminal ISU55_14360 IPR007197 Radical SAM ISU55_14360 IPR013483 Molybdenum cofactor biosynthesis protein A ISU55_14360 IPR006638 Elp3/MiaB/NifB ISU55_14360 IPR013785 Aldolase-type TIM barrel ISU55_14360 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site ISU55_14365 IPR010119 Gluconeogenesis factor ISU55_14365 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 ISU55_14365 IPR038136 Gluconeogenesis factor superfamily ISU55_14370 IPR018668 DNA-binding protein VF530-like ISU55_14370 IPR036361 SAP domain superfamily ISU55_14375 IPR024759 UvrB, YAD/RRR-motif-containing domain ISU55_14375 IPR041471 UvrB, interaction domain ISU55_14375 IPR004807 UvrABC system, subunit B ISU55_14375 IPR036876 UVR domain superfamily ISU55_14375 IPR001943 UVR domain ISU55_14375 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14375 IPR006935 Helicase/UvrB, N-terminal ISU55_14375 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_14375 IPR001650 Helicase, C-terminal ISU55_14380 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14380 IPR017871 ABC transporter, conserved site ISU55_14380 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ISU55_14380 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ISU55_14380 IPR003593 AAA+ ATPase domain ISU55_14380 IPR018449 NIL domain ISU55_14380 IPR003439 ABC transporter-like ISU55_14380 IPR026253 Methionine import ATP-binding protein MetN ISU55_14385 IPR004472 Dethiobiotin synthase BioD ISU55_14385 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_14390 IPR013216 Methyltransferase type 11 ISU55_14390 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC ISU55_14395 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ISU55_14395 IPR004839 Aminotransferase, class I/classII ISU55_14395 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type ISU55_14395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_14395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_14395 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_14395 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria ISU55_14400 IPR007197 Radical SAM ISU55_14400 IPR006638 Elp3/MiaB/NifB ISU55_14400 IPR013785 Aldolase-type TIM barrel ISU55_14400 IPR010722 Biotin and thiamin synthesis-associated domain ISU55_14400 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB ISU55_14400 IPR024177 Biotin synthase ISU55_14405 IPR005814 Aminotransferase class-III ISU55_14405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_14405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_14405 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_14405 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA ISU55_14410 IPR022528 6-phosphogluconolactonase, YbhE-type ISU55_14410 IPR019405 Lactonase, 7-bladed beta propeller ISU55_14410 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ISU55_14410 IPR011045 Nitrous oxide reductase, N-terminal ISU55_14415 IPR000150 Cof family ISU55_14415 IPR036412 HAD-like superfamily ISU55_14415 IPR023214 HAD superfamily ISU55_14415 IPR006379 HAD-superfamily hydrolase, subfamily IIB ISU55_14420 IPR003439 ABC transporter-like ISU55_14420 IPR003593 AAA+ ATPase domain ISU55_14420 IPR017871 ABC transporter, conserved site ISU55_14420 IPR011868 Molybdate ABC transporter, ATP-binding protein ISU55_14420 IPR005116 Transport-associated OB, type 1 ISU55_14420 IPR004606 Molybdenum-pterin binding ISU55_14420 IPR015852 ABC transporter, molybdenum import, ModC ISU55_14420 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_14420 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_14425 IPR011867 Molybdate ABC transporter, permease protein ISU55_14425 IPR035906 MetI-like superfamily ISU55_14430 IPR005950 Molybdate ABC transporter, substrate-binding protein ISU55_14435 IPR019702 Multidrug efflux pump accessory protein AcrZ ISU55_14440 IPR036390 Winged helix DNA-binding domain superfamily ISU55_14440 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_14440 IPR016462 Molybdate-dependent transcriptional regulator ModE ISU55_14440 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_14440 IPR003725 Molybdenum-binding protein ModE, N-terminal ISU55_14440 IPR004606 Molybdenum-pterin binding ISU55_14440 IPR005116 Transport-associated OB, type 1 ISU55_14440 IPR000847 Transcription regulator HTH, LysR ISU55_14445 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14445 IPR003593 AAA+ ATPase domain ISU55_14445 IPR003439 ABC transporter-like ISU55_14455 IPR016040 NAD(P)-binding domain ISU55_14455 IPR005886 UDP-glucose 4-epimerase ISU55_14455 IPR036291 NAD(P)-binding domain superfamily ISU55_14460 IPR036265 HIT-like superfamily ISU55_14460 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal ISU55_14460 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site ISU55_14460 IPR001937 Galactose-1-phosphate uridyl transferase, class I ISU55_14460 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal ISU55_14465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_14465 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_14465 IPR036554 GHMP kinase, C-terminal domain superfamily ISU55_14465 IPR013750 GHMP kinase, C-terminal domain ISU55_14465 IPR019741 Galactokinase, conserved site ISU55_14465 IPR006206 Mevalonate/galactokinase ISU55_14465 IPR022963 Galactokinase, bacterial ISU55_14465 IPR019539 Galactokinase galactose-binding domain ISU55_14465 IPR000705 Galactokinase ISU55_14465 IPR006204 GHMP kinase N-terminal domain ISU55_14465 IPR006203 GHMP kinase, ATP-binding, conserved site ISU55_14475 IPR011013 Galactose mutarotase-like domain superfamily ISU55_14475 IPR014718 Glycoside hydrolase-type carbohydrate-binding ISU55_14475 IPR013458 Aldose 1-epimerase, bacterial ISU55_14475 IPR015443 Aldose 1-epimerase ISU55_14475 IPR018052 Aldose 1-epimerase, conserved site ISU55_14475 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase ISU55_14485 IPR029033 Histidine phosphatase superfamily ISU55_14485 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site ISU55_14485 IPR013078 Histidine phosphatase superfamily, clade-1 ISU55_14485 IPR005952 Phosphoglycerate mutase 1 ISU55_14490 IPR006218 DAHP synthetase I/KDSA ISU55_14490 IPR013785 Aldolase-type TIM barrel ISU55_14490 IPR006219 DHAP synthase, class 1 ISU55_14495 IPR002524 Cation efflux protein ISU55_14495 IPR036837 Cation efflux protein, cytoplasmic domain superfamily ISU55_14495 IPR027469 Cation efflux transmembrane domain superfamily ISU55_14495 IPR023500 Zinc transporter ZitB ISU55_14500 IPR006419 Nicotinamide mononucleotide transporter PnuC ISU55_14505 IPR036094 Quinolinate synthetase A superfamily ISU55_14505 IPR003473 Quinolinate synthetase A ISU55_14505 IPR023513 Quinolinate synthase A, type 1 ISU55_14525 IPR019734 Tetratricopeptide repeat ISU55_14525 IPR032519 YbgF, trimerisation domain ISU55_14525 IPR014162 Cell division coordinator CpoB, C-terminal ISU55_14525 IPR034706 Cell division coordinator CpoB ISU55_14525 IPR013026 Tetratricopeptide repeat-containing domain ISU55_14525 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_14530 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal ISU55_14530 IPR006664 Outer membrane protein, bacterial ISU55_14530 IPR006665 OmpA-like domain ISU55_14530 IPR039001 Peptidoglycan-associated lipoprotein ISU55_14530 IPR036737 OmpA-like domain superfamily ISU55_14530 IPR006690 Outer membrane protein, OmpA-like, conserved site ISU55_14535 IPR011659 WD40-like Beta Propeller ISU55_14535 IPR014167 Tol-Pal system protein TolB ISU55_14535 IPR007195 TolB, N-terminal ISU55_14535 IPR011042 Six-bladed beta-propeller, TolB-like ISU55_14535 IPR036752 TolB, N-terminal domain superfamily ISU55_14540 IPR014161 Tol-Pal system, TolA ISU55_14540 IPR014161 Tol-Pal system, TolA ISU55_14545 IPR003400 Biopolymer transport protein ExbD/TolR ISU55_14545 IPR014168 Tol-Pal system protein TolR ISU55_14550 IPR002898 MotA/TolQ/ExbB proton channel ISU55_14550 IPR014163 Tol-Pal system, TolQ ISU55_14555 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family ISU55_14555 IPR029069 HotDog domain superfamily ISU55_14555 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site ISU55_14555 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase ISU55_14555 IPR006683 Thioesterase domain ISU55_14560 IPR011846 Cyd operon protein YbgE ISU55_14565 IPR012994 Membrane bound YbgT-like ISU55_14565 IPR011724 Cyd operon protein YbgT ISU55_14570 IPR003317 Cytochrome ubiquinol oxidase subunit 2 ISU55_14575 IPR002585 Cytochrome ubiquinol oxidase subunit 1 ISU55_14580 IPR005810 Succinyl-CoA ligase, alpha subunit ISU55_14580 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site ISU55_14580 IPR016102 Succinyl-CoA synthetase-like ISU55_14580 IPR003781 CoA-binding ISU55_14580 IPR005811 ATP-citrate lyase/succinyl-CoA ligase ISU55_14580 IPR036291 NAD(P)-binding domain superfamily ISU55_14580 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ISU55_14585 IPR013815 ATP-grasp fold, subdomain 1 ISU55_14585 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site ISU55_14585 IPR005809 Succinate--CoA synthetase, beta subunit ISU55_14585 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type ISU55_14585 IPR011761 ATP-grasp fold ISU55_14585 IPR005811 ATP-citrate lyase/succinyl-CoA ligase ISU55_14585 IPR016102 Succinyl-CoA synthetase-like ISU55_14590 IPR011053 Single hybrid motif ISU55_14590 IPR004167 Peripheral subunit-binding domain ISU55_14590 IPR036625 E3-binding domain superfamily ISU55_14590 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ISU55_14590 IPR000089 Biotin/lipoyl attachment ISU55_14590 IPR006255 Dihydrolipoamide succinyltransferase ISU55_14590 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ISU55_14590 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ISU55_14595 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain ISU55_14595 IPR005475 Transketolase-like, pyrimidine-binding domain ISU55_14595 IPR011603 2-oxoglutarate dehydrogenase E1 component ISU55_14595 IPR001017 Dehydrogenase, E1 component ISU55_14595 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal ISU55_14595 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily ISU55_14595 IPR029061 Thiamin diphosphate-binding fold ISU55_14600 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ISU55_14600 IPR036010 2Fe-2S ferredoxin-like superfamily ISU55_14600 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_14600 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ISU55_14600 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein ISU55_14600 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal ISU55_14600 IPR012675 Beta-grasp domain superfamily ISU55_14600 IPR009051 Alpha-helical ferredoxin ISU55_14605 IPR011281 Succinate dehydrogenase, flavoprotein subunit ISU55_14605 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit ISU55_14605 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal ISU55_14605 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ISU55_14605 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily ISU55_14605 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ISU55_14605 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site ISU55_14605 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_14610 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit ISU55_14610 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor ISU55_14610 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit ISU55_14615 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit ISU55_14615 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit ISU55_14615 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site ISU55_14615 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit ISU55_14620 IPR024176 Citrate synthase, bacterial-type ISU55_14620 IPR036969 Citrate synthase superfamily ISU55_14620 IPR016143 Citrate synthase-like, small alpha subdomain ISU55_14620 IPR016142 Citrate synthase-like, large alpha subdomain ISU55_14620 IPR019810 Citrate synthase active site ISU55_14620 IPR010953 Citrate synthase, type I ISU55_14620 IPR002020 Citrate synthase ISU55_14625 IPR000740 GrpE nucleotide exchange factor ISU55_14625 IPR009012 GrpE nucleotide exchange factor, head ISU55_14625 IPR013805 GrpE nucleotide exchange factor, coiled-coil ISU55_14630 IPR002504 NAD kinase ISU55_14630 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ISU55_14630 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal ISU55_14630 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ISU55_14635 IPR003395 RecF/RecN/SMC, N-terminal ISU55_14635 IPR004604 DNA recombination/repair protein RecN ISU55_14635 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14640 IPR007450 Lipoprotein SmpA/OmlA ISU55_14640 IPR037873 BamE-like ISU55_14640 IPR026592 Outer membrane protein assembly factor BamE ISU55_14645 IPR005346 RnfH protein ISU55_14645 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ISU55_14645 IPR037021 RnfH superfamily ISU55_14650 IPR023393 START-like domain superfamily ISU55_14650 IPR005031 Coenzyme Q-binding protein COQ10, START domain ISU55_14655 IPR000037 SsrA-binding protein ISU55_14655 IPR020081 SsrA-binding protein, conserved site ISU55_14655 IPR023620 Small protein B ISU55_14665 IPR036515 Transposase IS200-like superfamily ISU55_14665 IPR002686 Transposase IS200-like ISU55_14670 IPR025166 Integrase, DNA-binding domain ISU55_14670 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_14670 IPR013762 Integrase-like, catalytic domain superfamily ISU55_14670 IPR002104 Integrase, catalytic domain ISU55_14670 IPR038488 Integrase, DNA-binding domain superfamily ISU55_14670 IPR010998 Integrase/recombinase, N-terminal ISU55_14710 IPR038724 Regulatory protein RepA ISU55_14710 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14720 IPR009241 Toxin HigB-like ISU55_14720 IPR014056 Addiction module killer protein, predicted ISU55_14730 IPR012337 Ribonuclease H-like superfamily ISU55_14730 IPR006120 Resolvase, HTH domain ISU55_14730 IPR001584 Integrase, catalytic core ISU55_14730 IPR017894 HTH domain, IS21 transposase-type ISU55_14730 IPR036397 Ribonuclease H superfamily ISU55_14735 IPR001270 ClpA/B family ISU55_14735 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14735 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_14735 IPR002611 IstB-like ATP-binding protein ISU55_14735 IPR003593 AAA+ ATPase domain ISU55_14745 IPR038271 Purine-cytosine permease superfamily ISU55_14745 IPR001248 Purine-cytosine permease ISU55_14745 IPR012681 Nucleobase cation symporter-1, NCS1 ISU55_14755 IPR013520 Exonuclease, RNase T/DNA polymerase III ISU55_14755 IPR012337 Ribonuclease H-like superfamily ISU55_14755 IPR036397 Ribonuclease H superfamily ISU55_14755 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain ISU55_14755 IPR006309 DNA polymerase 3, epsilon subunit ISU55_14760 IPR002156 Ribonuclease H domain ISU55_14760 IPR036397 Ribonuclease H superfamily ISU55_14760 IPR012337 Ribonuclease H-like superfamily ISU55_14760 IPR022892 Ribonuclease HI ISU55_14765 IPR026669 Arsenite methyltransferase-like ISU55_14765 IPR013216 Methyltransferase type 11 ISU55_14765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_14770 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain ISU55_14770 IPR017782 Hydroxyacylglutathione hydrolase ISU55_14770 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain ISU55_14770 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ISU55_14770 IPR001279 Metallo-beta-lactamase ISU55_14775 IPR018392 LysM domain ISU55_14775 IPR036779 LysM domain superfamily ISU55_14775 IPR023346 Lysozyme-like domain superfamily ISU55_14775 IPR000189 Prokaryotic transglycosylase, active site ISU55_14775 IPR008258 Transglycosylase SLT domain 1 ISU55_14780 IPR005135 Endonuclease/exonuclease/phosphatase ISU55_14780 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ISU55_14780 IPR022958 Uncharacterised protein family UPF0294 ISU55_14790 IPR018170 Aldo/keto reductase, conserved site ISU55_14790 IPR023210 NADP-dependent oxidoreductase domain ISU55_14790 IPR020471 Aldo/keto reductase ISU55_14790 IPR036812 NADP-dependent oxidoreductase domain superfamily ISU55_14820 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase ISU55_14820 IPR023214 HAD superfamily ISU55_14820 IPR006549 HAD-superfamily hydrolase,subfamily IIIA ISU55_14820 IPR036412 HAD-like superfamily ISU55_14820 IPR006543 Histidinol-phosphate phosphatase ISU55_14825 IPR003593 AAA+ ATPase domain ISU55_14825 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria ISU55_14825 IPR017871 ABC transporter, conserved site ISU55_14825 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ISU55_14825 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ISU55_14825 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_14825 IPR003439 ABC transporter-like ISU55_14825 IPR018449 NIL domain ISU55_14825 IPR026253 Methionine import ATP-binding protein MetN ISU55_14830 IPR035906 MetI-like superfamily ISU55_14830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_14835 IPR004872 Lipoprotein NlpA family ISU55_14840 IPR030852 Outer membrane lipoprotein RcsF ISU55_14845 IPR040372 YaeB-like ISU55_14845 IPR023368 Uncharacterised protein family UPF0066, conserved site ISU55_14845 IPR041369 TrmO, C-terminal ISU55_14845 IPR036413 YaeB-like superfamily ISU55_14845 IPR023370 TrmO-like, N-terminal domain ISU55_14845 IPR036414 YaeB, N-terminal domain superfamily ISU55_14850 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_14850 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain ISU55_14850 IPR036621 Anticodon-binding domain superfamily ISU55_14850 IPR004154 Anticodon-binding ISU55_14850 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 ISU55_14850 IPR033730 Prokaryote proline-tRNA ligase core domain ISU55_14850 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily ISU55_14850 IPR002316 Proline-tRNA ligase, class IIa ISU55_14850 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type ISU55_14850 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ISU55_14855 IPR038139 NlpE, C-terminal domain superfamily ISU55_14855 IPR033450 NlpE, C-terminal OB domain ISU55_14855 IPR007298 Copper resistance lipoprotein NlpE ISU55_14860 IPR000352 Peptide chain release factor class I ISU55_14865 IPR038590 YaeQ superfamily ISU55_14865 IPR009822 YaeQ ISU55_14865 IPR011335 Restriction endonuclease type II-like ISU55_14870 IPR009624 Uncharacterised protein family UPF0253 ISU55_14875 IPR009778 Modulator of Rho-dependent transcription termination ISU55_14875 IPR038626 Rof-like superfamily ISU55_14875 IPR023534 Rof/RNase P-like ISU55_14880 IPR008168 Cytochrome c, class IC ISU55_14880 IPR009056 Cytochrome c-like domain ISU55_14880 IPR036909 Cytochrome c-like domain superfamily ISU55_14885 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal ISU55_14885 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal ISU55_14885 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain ISU55_14885 IPR012094 tRNA(Ile)-lysidine synthase ISU55_14885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_14885 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal ISU55_14890 IPR037478 YwkD-like domain ISU55_14890 IPR037523 Vicinal oxygen chelate (VOC) domain ISU55_14890 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ISU55_14890 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ISU55_14895 IPR001095 Acetyl-CoA carboxylase, alpha subunit ISU55_14895 IPR029045 ClpP/crotonase-like domain superfamily ISU55_14895 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal ISU55_14900 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain ISU55_14900 IPR004013 PHP domain ISU55_14900 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ISU55_14900 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain ISU55_14900 IPR040982 DNA polymerase III alpha subunit finger domain ISU55_14900 IPR003141 Polymerase/histidinol phosphatase, N-terminal ISU55_14900 IPR004805 DNA polymerase III, alpha subunit ISU55_14900 IPR016195 Polymerase/histidinol phosphatase-like ISU55_14900 IPR029460 DNA polymerase, helix-hairpin-helix motif ISU55_14905 IPR001352 Ribonuclease HII/HIII ISU55_14905 IPR024567 Ribonuclease HII/HIII domain ISU55_14905 IPR012337 Ribonuclease H-like superfamily ISU55_14905 IPR022898 Ribonuclease HII ISU55_14905 IPR036397 Ribonuclease H superfamily ISU55_14910 IPR003835 Glycosyl transferase, family 19 ISU55_14915 IPR001451 Hexapeptide repeat ISU55_14915 IPR011004 Trimeric LpxA-like superfamily ISU55_14915 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase ISU55_14915 IPR018357 Hexapeptide transferase, conserved site ISU55_14915 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal ISU55_14915 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily ISU55_14920 IPR029069 HotDog domain superfamily ISU55_14920 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ISU55_14920 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ ISU55_14925 IPR001451 Hexapeptide repeat ISU55_14925 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region ISU55_14925 IPR011004 Trimeric LpxA-like superfamily ISU55_14925 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD ISU55_14925 IPR018357 Hexapeptide transferase, conserved site ISU55_14930 IPR024930 Skp domain superfamily ISU55_14930 IPR005632 Chaperone protein Skp ISU55_14935 IPR023707 Outer membrane protein assembly factor BamA ISU55_14935 IPR034746 POTRA domain ISU55_14935 IPR039910 Surface antigen D15-like ISU55_14935 IPR010827 POTRA domain, BamA/TamA-like ISU55_14935 IPR000184 Bacterial surface antigen (D15) ISU55_14940 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase ISU55_14940 IPR036034 PDZ superfamily ISU55_14940 IPR041489 PDZ domain 6 ISU55_14940 IPR008915 Peptidase M50 ISU55_14940 IPR001478 PDZ domain ISU55_14945 IPR000374 Phosphatidate cytidylyltransferase ISU55_14950 IPR036424 Decaprenyl diphosphate synthase-like superfamily ISU55_14950 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site ISU55_14950 IPR001441 Decaprenyl diphosphate synthase-like ISU55_14955 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal ISU55_14955 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal ISU55_14955 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU55_14955 IPR036291 NAD(P)-binding domain superfamily ISU55_14955 IPR036169 DXP reductoisomerase, C-terminal domain superfamily ISU55_14955 IPR026877 DXP reductoisomerase C-terminal domain ISU55_14960 IPR023584 Ribosome recycling factor domain ISU55_14960 IPR036191 RRF superfamily ISU55_14960 IPR002661 Ribosome recycling factor ISU55_14965 IPR015963 Uridylate kinase, bacteria ISU55_14965 IPR036393 Acetylglutamate kinase-like superfamily ISU55_14965 IPR011817 Uridylate kinase ISU55_14965 IPR001048 Aspartate/glutamate/uridylate kinase ISU55_14970 IPR036402 Elongation factor Ts, dimerisation domain superfamily ISU55_14970 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation ISU55_14970 IPR001816 Translation elongation factor EFTs/EF1B ISU55_14970 IPR018101 Translation elongation factor Ts, conserved site ISU55_14970 IPR009060 UBA-like superfamily ISU55_14975 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid ISU55_14975 IPR001865 Ribosomal protein S2 ISU55_14975 IPR018130 Ribosomal protein S2, conserved site ISU55_14975 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ISU55_14980 IPR036005 Creatinase/aminopeptidase-like ISU55_14980 IPR000994 Peptidase M24 ISU55_14980 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 ISU55_14980 IPR001714 Peptidase M24, methionine aminopeptidase ISU55_14985 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase ISU55_14985 IPR006674 HD domain ISU55_14985 IPR002934 Polymerase, nucleotidyl transferase domain ISU55_14985 IPR003607 HD/PDEase domain ISU55_14985 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme ISU55_14985 IPR002912 ACT domain ISU55_14990 IPR018357 Hexapeptide transferase, conserved site ISU55_14990 IPR001451 Hexapeptide repeat ISU55_14990 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family ISU55_14990 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily ISU55_14990 IPR011004 Trimeric LpxA-like superfamily ISU55_14990 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 ISU55_14995 IPR020911 Uncharacterised protein family UPF0325 ISU55_15000 IPR029039 Flavoprotein-like superfamily ISU55_15000 IPR001094 Flavodoxin-like ISU55_15000 IPR008254 Flavodoxin/nitric oxide synthase ISU55_15005 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_15005 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ISU55_15005 IPR006145 Pseudouridine synthase, RsuA/RluA ISU55_15010 IPR023376 YqcC-like domain ISU55_15010 IPR007384 Protein of unknown function UCP006257 ISU55_15010 IPR036814 YqcC-like superfamily ISU55_15015 IPR002686 Transposase IS200-like ISU55_15015 IPR036515 Transposase IS200-like superfamily ISU55_15020 IPR009948 Syd ISU55_15020 IPR038228 Syd superfamily ISU55_15025 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF ISU55_15025 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal ISU55_15025 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 ISU55_15030 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily ISU55_15030 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal ISU55_15030 IPR021826 Domain of unknown function DUF3412 ISU55_15030 IPR031100 LOG family ISU55_15035 IPR008918 Helix-hairpin-helix motif, class 2 ISU55_15035 IPR038969 Flap endonuclease ISU55_15035 IPR029060 PIN-like domain superfamily ISU55_15035 IPR002421 5'-3' exonuclease, N-terminal ISU55_15035 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal ISU55_15035 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ISU55_15035 IPR020045 DNA polymerase I-like, H3TH domain ISU55_15035 IPR022895 Flap endonuclease Xni ISU55_15040 IPR002877 Ribosomal RNA methyltransferase FtsJ domain ISU55_15040 IPR011224 Ribosomal RNA large subunit methyltransferase M ISU55_15040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_15040 IPR040739 RlmM ferredoxin-like domain ISU55_15045 IPR006696 Protein of unknown function DUF423 ISU55_15050 IPR005119 LysR, substrate-binding ISU55_15050 IPR000847 Transcription regulator HTH, LysR ISU55_15050 IPR036390 Winged helix DNA-binding domain superfamily ISU55_15050 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_15060 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA ISU55_15060 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ISU55_15060 IPR000192 Aminotransferase class V domain ISU55_15060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_15060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_15060 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_15065 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE ISU55_15065 IPR003808 Fe-S metabolism associated domain, SufE-like ISU55_15070 IPR000594 THIF-type NAD/FAD binding fold ISU55_15070 IPR035985 Ubiquitin-activating enzyme ISU55_15075 IPR005300 Lytic transglycosylase MltA, domain B ISU55_15075 IPR034654 MltA, 3D domain ISU55_15075 IPR026044 Membrane-bound lytic murein transglycosylase A ISU55_15075 IPR010611 3D domain ISU55_15075 IPR036908 RlpA-like domain superfamily ISU55_15090 IPR021731 AMIN domain ISU55_15090 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain ISU55_15090 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_15095 IPR036393 Acetylglutamate kinase-like superfamily ISU55_15095 IPR001048 Aspartate/glutamate/uridylate kinase ISU55_15095 IPR000182 GNAT domain ISU55_15095 IPR033719 N-acetylglutamate synthase, kinase-like domain ISU55_15095 IPR010167 Amino-acid N-acetyltransferase ISU55_15095 IPR016181 Acyl-CoA N-acyltransferase ISU55_15100 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain ISU55_15100 IPR006344 RecBCD enzyme subunit RecD ISU55_15100 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15100 IPR003593 AAA+ ATPase domain ISU55_15100 IPR027785 UvrD-like helicase C-terminal domain ISU55_15105 IPR004586 RecBCD enzyme subunit RecB ISU55_15105 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ISU55_15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15105 IPR011604 Exonuclease, phage-type/RecB, C-terminal ISU55_15105 IPR014017 UvrD-like DNA helicase, C-terminal ISU55_15105 IPR014016 UvrD-like helicase, ATP-binding domain ISU55_15105 IPR034739 UvrD/AddA helicase, N-terminal ISU55_15105 IPR000212 DNA helicase, UvrD/REP type ISU55_15105 IPR011335 Restriction endonuclease type II-like ISU55_15115 IPR036397 Ribonuclease H superfamily ISU55_15115 IPR012337 Ribonuclease H-like superfamily ISU55_15115 IPR006120 Resolvase, HTH domain ISU55_15115 IPR001584 Integrase, catalytic core ISU55_15115 IPR017894 HTH domain, IS21 transposase-type ISU55_15120 IPR001270 ClpA/B family ISU55_15120 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_15120 IPR002611 IstB-like ATP-binding protein ISU55_15120 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15120 IPR003593 AAA+ ATPase domain ISU55_15130 IPR013986 DExx box DNA helicase domain superfamily ISU55_15130 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15130 IPR006697 RecBCD enzyme subunit RecC ISU55_15130 IPR011335 Restriction endonuclease type II-like ISU55_15130 IPR041500 RecC, C-terminal ISU55_15155 IPR000398 Thymidylate synthase ISU55_15155 IPR020940 Thymidylate synthase, active site ISU55_15155 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily ISU55_15155 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain ISU55_15160 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt ISU55_15165 IPR040442 Pyruvate kinase-like domain superfamily ISU55_15165 IPR006318 Phosphotransferase system, enzyme I-like ISU55_15165 IPR003018 GAF domain ISU55_15165 IPR008731 Phosphotransferase system, enzyme I N-terminal ISU55_15165 IPR036618 PtsI, HPr-binding domain superfamily ISU55_15165 IPR036637 Phosphohistidine domain superfamily ISU55_15165 IPR029016 GAF-like domain superfamily ISU55_15165 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_15165 IPR000121 PEP-utilising enzyme, C-terminal ISU55_15165 IPR008279 PEP-utilising enzyme, mobile domain ISU55_15165 IPR018274 PEP-utilising enzyme, active site ISU55_15165 IPR023151 PEP-utilising enzyme, conserved site ISU55_15170 IPR022927 RNA pyrophosphohydrolase RppH ISU55_15170 IPR020476 NUDIX hydrolase ISU55_15170 IPR020084 NUDIX hydrolase, conserved site ISU55_15170 IPR000086 NUDIX hydrolase domain ISU55_15170 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_15175 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II ISU55_15175 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily ISU55_15175 IPR004230 DNA mismatch repair protein MutH ISU55_15175 IPR011335 Restriction endonuclease type II-like ISU55_15180 IPR023210 NADP-dependent oxidoreductase domain ISU55_15180 IPR036812 NADP-dependent oxidoreductase domain superfamily ISU55_15180 IPR020471 Aldo/keto reductase ISU55_15195 IPR023727 Lysophospholipid transporter LplT ISU55_15195 IPR011701 Major facilitator superfamily ISU55_15195 IPR036259 MFS transporter superfamily ISU55_15200 IPR020845 AMP-binding, conserved site ISU55_15200 IPR000873 AMP-dependent synthetase/ligase ISU55_15200 IPR042099 AMP-dependent synthetase-like superfamily ISU55_15200 IPR023775 Bifunctional protein Aas ISU55_15200 IPR002123 Phospholipid/glycerol acyltransferase ISU55_15200 IPR025110 AMP-binding enzyme, C-terminal domain ISU55_15205 IPR006657 Molybdopterin dinucleotide-binding domain ISU55_15205 IPR006656 Molybdopterin oxidoreductase ISU55_15205 IPR009010 Aspartate decarboxylase-like domain superfamily ISU55_15205 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site ISU55_15205 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase ISU55_15210 IPR028082 Periplasmic binding protein-like I ISU55_15210 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_15210 IPR000843 LacI-type HTH domain ISU55_15215 IPR002986 Diaminopimelate decarboxylase, LysA ISU55_15215 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal ISU55_15215 IPR029066 PLP-binding barrel ISU55_15215 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ISU55_15215 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal ISU55_15215 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ISU55_15215 IPR000183 Ornithine/DAP/Arg decarboxylase ISU55_15215 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ISU55_15220 IPR036390 Winged helix DNA-binding domain superfamily ISU55_15220 IPR000847 Transcription regulator HTH, LysR ISU55_15220 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_15220 IPR037414 Transcriptional activator protein LysR, PBP2 domain ISU55_15220 IPR005119 LysR, substrate-binding ISU55_15225 IPR020846 Major facilitator superfamily domain ISU55_15225 IPR011701 Major facilitator superfamily ISU55_15225 IPR036259 MFS transporter superfamily ISU55_15230 IPR000847 Transcription regulator HTH, LysR ISU55_15230 IPR036390 Winged helix DNA-binding domain superfamily ISU55_15230 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_15230 IPR005119 LysR, substrate-binding ISU55_15245 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site ISU55_15245 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily ISU55_15245 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ISU55_15245 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU55_15245 IPR003660 HAMP domain ISU55_15245 IPR004090 Chemotaxis methyl-accepting receptor ISU55_15265 IPR014032 Peptidase A24A, prepilin type IV, bacterial ISU55_15265 IPR000045 Prepilin type IV endopeptidase, peptidase domain ISU55_15265 IPR010627 Peptidase A24A, N-terminal ISU55_15285 IPR010055 Type II secretion system protein J ISU55_15285 IPR012902 Prokaryotic N-terminal methylation site ISU55_15290 IPR010052 Type II secretion system protein I ISU55_15290 IPR003413 Type II secretion system protein I domain ISU55_15290 IPR012902 Prokaryotic N-terminal methylation site ISU55_15300 IPR010054 General secretion pathway protein G ISU55_15300 IPR000983 Bacterial general secretion pathway protein G-type pilin ISU55_15300 IPR012902 Prokaryotic N-terminal methylation site ISU55_15300 IPR013545 Type II secretion system protein G ISU55_15310 IPR042181 Type II secretion system, protein E, N-terminal ISU55_15310 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15310 IPR013369 Type II secretion system GspE ISU55_15310 IPR037257 General secretory system II, protein E, N-terminal superfamily ISU55_15310 IPR003593 AAA+ ATPase domain ISU55_15310 IPR001482 Type II/IV secretion system protein ISU55_15315 IPR004846 Type II/III secretion system ISU55_15315 IPR038591 NolW-like superfamily ISU55_15315 IPR005644 NolW-like ISU55_15315 IPR001775 GspD/PilQ family ISU55_15315 IPR004845 Type II secretion system GspD, conserved site ISU55_15315 IPR013356 Type II secretion system GspD ISU55_15330 IPR036874 Carbonic anhydrase superfamily ISU55_15330 IPR001765 Carbonic anhydrase ISU55_15330 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site ISU55_15350 IPR015176 Lyase, N-terminal ISU55_15350 IPR015177 Lyase, catalytic ISU55_15350 IPR003159 Polysaccharide lyase family 8, central domain ISU55_15350 IPR004103 Polysaccharide lyase family 8, C-terminal ISU55_15350 IPR011071 Polysaccharide lyase family 8-like, C-terminal ISU55_15350 IPR014718 Glycoside hydrolase-type carbohydrate-binding ISU55_15350 IPR008979 Galactose-binding-like domain superfamily ISU55_15350 IPR011013 Galactose mutarotase-like domain superfamily ISU55_15350 IPR039174 Chondroitin sulfate ABC lyase ISU55_15350 IPR008929 Chondroitin AC/alginate lyase ISU55_15350 IPR024200 Chondroitin sulfate ABC endolyase ISU55_15355 IPR003593 AAA+ ATPase domain ISU55_15355 IPR001270 ClpA/B family ISU55_15355 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_15355 IPR002611 IstB-like ATP-binding protein ISU55_15355 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15360 IPR036397 Ribonuclease H superfamily ISU55_15360 IPR012337 Ribonuclease H-like superfamily ISU55_15360 IPR006120 Resolvase, HTH domain ISU55_15360 IPR001584 Integrase, catalytic core ISU55_15360 IPR017894 HTH domain, IS21 transposase-type ISU55_15365 IPR036515 Transposase IS200-like superfamily ISU55_15365 IPR002686 Transposase IS200-like ISU55_15370 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_15370 IPR000917 Sulfatase, N-terminal ISU55_15375 IPR036390 Winged helix DNA-binding domain superfamily ISU55_15375 IPR037171 NagB/RpiA transferase-like ISU55_15375 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_15375 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ISU55_15375 IPR001034 DeoR-type HTH domain ISU55_15375 IPR014036 DeoR C-terminal sensor domain ISU55_15380 IPR013785 Aldolase-type TIM barrel ISU55_15380 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ ISU55_15380 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like ISU55_15385 IPR014180 Sugar isomerase, AgaS ISU55_15385 IPR035464 AgaS, SIS domain ISU55_15385 IPR001347 Sugar isomerase (SIS) ISU55_15385 IPR035466 GlmS/AgaS, SIS domain 1 ISU55_15390 IPR004720 Phosphotransferase system, sorbose subfamily IIB component ISU55_15390 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily ISU55_15390 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup ISU55_15395 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit ISU55_15400 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component ISU55_15405 IPR004701 Phosphotransferase system, mannose-type IIA component ISU55_15405 IPR033887 PTS system mannose/sorbose specific IIA subunit ISU55_15405 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily ISU55_15410 IPR006680 Amidohydrolase-related ISU55_15410 IPR003764 N-acetylglucosamine-6-phosphate deacetylase ISU55_15410 IPR011059 Metal-dependent hydrolase, composite domain superfamily ISU55_15410 IPR032466 Metal-dependent hydrolase ISU55_15415 IPR002347 Short-chain dehydrogenase/reductase SDR ISU55_15415 IPR020904 Short-chain dehydrogenase/reductase, conserved site ISU55_15415 IPR036291 NAD(P)-binding domain superfamily ISU55_15415 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase ISU55_15420 IPR012341 Six-hairpin glycosidase-like superfamily ISU55_15420 IPR008928 Six-hairpin glycosidase superfamily ISU55_15420 IPR010905 Glycosyl hydrolase, family 88 ISU55_15425 IPR013785 Aldolase-type TIM barrel ISU55_15425 IPR023885 4Fe4S-binding SPASM domain ISU55_15425 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme ISU55_15425 IPR007197 Radical SAM ISU55_15430 IPR000917 Sulfatase, N-terminal ISU55_15430 IPR024607 Sulfatase, conserved site ISU55_15430 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_15440 IPR013785 Aldolase-type TIM barrel ISU55_15440 IPR000771 Fructose-bisphosphate aldolase, class-II ISU55_15440 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY ISU55_15440 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY ISU55_15450 IPR000843 LacI-type HTH domain ISU55_15450 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_15450 IPR028082 Periplasmic binding protein-like I ISU55_15450 IPR023588 Transcription regulator HTH, PurR ISU55_15455 IPR036259 MFS transporter superfamily ISU55_15455 IPR011701 Major facilitator superfamily ISU55_15455 IPR020846 Major facilitator superfamily domain ISU55_15460 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 ISU55_15460 IPR033403 Domain of unknown function DUF5110 ISU55_15460 IPR017853 Glycoside hydrolase superfamily ISU55_15460 IPR011013 Galactose mutarotase-like domain superfamily ISU55_15460 IPR000322 Glycoside hydrolase family 31 ISU55_15460 IPR030458 Glycosyl hydrolases family 31, active site ISU55_15460 IPR030459 Glycosyl hydrolases family 31, conserved site ISU55_15460 IPR025887 Glycoside hydrolase family 31, N-terminal domain ISU55_15460 IPR013780 Glycosyl hydrolase, all-beta ISU55_15465 IPR028082 Periplasmic binding protein-like I ISU55_15465 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_15465 IPR000843 LacI-type HTH domain ISU55_15470 IPR003192 Porin, LamB-type ISU55_15470 IPR023738 Maltoporin ISU55_15470 IPR036998 Porin, LamB-type superfamily ISU55_15475 IPR036878 Glucose permease domain IIB ISU55_15475 IPR003352 Phosphotransferase system, EIIC ISU55_15475 IPR013013 Phosphotransferase system, EIIC component, type 1 ISU55_15475 IPR001996 Phosphotransferase system, IIB component, type 1 ISU55_15475 IPR011299 PTS system glucose-specific IIBC component ISU55_15475 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ISU55_15480 IPR029062 Class I glutamine amidotransferase-like ISU55_15480 IPR003476 Glycoside hydrolase, family 42 ISU55_15480 IPR013529 Glycoside hydrolase, family 42, N-terminal ISU55_15480 IPR013780 Glycosyl hydrolase, all-beta ISU55_15480 IPR017853 Glycoside hydrolase superfamily ISU55_15480 IPR013738 Beta-galactosidase trimerisation ISU55_15480 IPR013739 Beta-galactosidase C-terminal ISU55_15485 IPR017853 Glycoside hydrolase superfamily ISU55_15485 IPR011683 Glycosyl hydrolase family 53 ISU55_15490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_15490 IPR035906 MetI-like superfamily ISU55_15495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_15495 IPR035906 MetI-like superfamily ISU55_15500 IPR006059 Bacterial extracellular solute-binding protein ISU55_15500 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein ISU55_15505 IPR017871 ABC transporter, conserved site ISU55_15505 IPR003439 ABC transporter-like ISU55_15505 IPR003593 AAA+ ATPase domain ISU55_15505 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15505 IPR040582 MalK, OB fold domain ISU55_15505 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_15510 IPR015861 ABC transporter, ribose import, RbsA ISU55_15510 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15510 IPR003439 ABC transporter-like ISU55_15510 IPR003593 AAA+ ATPase domain ISU55_15510 IPR017871 ABC transporter, conserved site ISU55_15515 IPR001851 ABC transporter, permease ISU55_15520 IPR025997 Periplasmic binding protein ISU55_15520 IPR028082 Periplasmic binding protein-like I ISU55_15530 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU55_15530 IPR038765 Papain-like cysteine peptidase superfamily ISU55_15535 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_15535 IPR005149 Transcription regulator PadR, N-terminal ISU55_15535 IPR036390 Winged helix DNA-binding domain superfamily ISU55_15625 IPR001387 Cro/C1-type helix-turn-helix domain ISU55_15625 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_15625 IPR022453 Zinc finger, MqsA-type ISU55_15625 IPR032758 Antitoxin MqsA/HigA-2 ISU55_15625 IPR022452 Antitoxin MqsA ISU55_15630 IPR031451 mRNA interferase toxin MqsR ISU55_15630 IPR038493 Toxin MqsR superfamily ISU55_15650 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_15650 IPR013762 Integrase-like, catalytic domain superfamily ISU55_15650 IPR002104 Integrase, catalytic domain ISU55_15650 IPR038488 Integrase, DNA-binding domain superfamily ISU55_15650 IPR025166 Integrase, DNA-binding domain ISU55_15650 IPR004107 Integrase, SAM-like, N-terminal ISU55_15650 IPR010998 Integrase/recombinase, N-terminal ISU55_15660 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ISU55_15660 IPR002313 Lysine-tRNA ligase, class II ISU55_15660 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II ISU55_15660 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal ISU55_15660 IPR012340 Nucleic acid-binding, OB-fold ISU55_15660 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ISU55_15660 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_15670 IPR001667 DDH domain ISU55_15670 IPR041122 RecJ, OB domain ISU55_15670 IPR004610 Bacterial RecJ exonuclease ISU55_15670 IPR003156 DHHA1 domain ISU55_15670 IPR038763 DHH phosphoesterase superfamily ISU55_15675 IPR012336 Thioredoxin-like fold ISU55_15675 IPR036249 Thioredoxin-like superfamily ISU55_15675 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily ISU55_15675 IPR013766 Thioredoxin domain ISU55_15675 IPR033954 Disulphide bond isomerase, DsbC/G ISU55_15675 IPR017937 Thioredoxin, conserved site ISU55_15675 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ISU55_15680 IPR004107 Integrase, SAM-like, N-terminal ISU55_15680 IPR011932 Tyrosine recombinase XerD ISU55_15680 IPR010998 Integrase/recombinase, N-terminal ISU55_15680 IPR002104 Integrase, catalytic domain ISU55_15680 IPR013762 Integrase-like, catalytic domain superfamily ISU55_15680 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_15680 IPR023009 Tyrosine recombinase XerC/XerD ISU55_15685 IPR010086 Flavodoxin, long chain ISU55_15685 IPR001226 Flavodoxin, conserved site ISU55_15685 IPR029039 Flavoprotein-like superfamily ISU55_15685 IPR008254 Flavodoxin/nitric oxide synthase ISU55_15690 IPR010364 Uncharacterised protein family, inner membrane CreD ISU55_15695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_15695 IPR029151 Periplasmic sensor-like domain superfamily ISU55_15695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_15695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_15695 IPR005467 Histidine kinase domain ISU55_15695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_15695 IPR003660 HAMP domain ISU55_15695 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_15700 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_15700 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_15700 IPR011006 CheY-like superfamily ISU55_15700 IPR001789 Signal transduction response regulator, receiver domain ISU55_15700 IPR039420 Transcriptional regulatory protein WalR-like ISU55_15700 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_15705 IPR009883 Inner membrane protein YgfX ISU55_15710 IPR005631 Flavinator of succinate dehydrogenase ISU55_15710 IPR036714 Flavinator of succinate dehydrogenase superfamily ISU55_15715 IPR006222 Aminomethyltransferase, folate-binding domain ISU55_15715 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ISU55_15715 IPR023758 tRNA-modifying protein YgfZ ISU55_15715 IPR017703 YgfZ/GcvT conserved site ISU55_15725 IPR005744 Hly-III ISU55_15725 IPR004254 AdipoR/Haemolysin-III-related ISU55_15755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_15755 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_15755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_15755 IPR020581 Glycine cleavage system P protein ISU55_15755 IPR003437 Glycine dehydrogenase (decarboxylating) ISU55_15760 IPR011053 Single hybrid motif ISU55_15760 IPR017453 Glycine cleavage system H-protein, subgroup ISU55_15760 IPR002930 Glycine cleavage system H-protein ISU55_15760 IPR000089 Biotin/lipoyl attachment ISU55_15760 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ISU55_15760 IPR033753 Glycine cleavage system H-protein/Simiate ISU55_15765 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain ISU55_15765 IPR006222 Aminomethyltransferase, folate-binding domain ISU55_15765 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ISU55_15765 IPR006223 Glycine cleavage system T protein ISU55_15765 IPR022903 Glycine cleavage system T protein, bacteria ISU55_15765 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 ISU55_15765 IPR028896 Aminomethyltransferase-like ISU55_15770 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 ISU55_15770 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site ISU55_15770 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_15770 IPR002938 FAD-binding domain ISU55_15775 IPR002938 FAD-binding domain ISU55_15775 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_15775 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 ISU55_15775 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase ISU55_15775 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site ISU55_15780 IPR036005 Creatinase/aminopeptidase-like ISU55_15780 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ISU55_15780 IPR001714 Peptidase M24, methionine aminopeptidase ISU55_15780 IPR000994 Peptidase M24 ISU55_15780 IPR007865 Aminopeptidase P, N-terminal ISU55_15780 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ISU55_15785 IPR011978 Uncharacterised protein family UPF0149 ISU55_15785 IPR036255 YgfB-like superfamily ISU55_15790 IPR007838 Cell division protein ZapA-like ISU55_15790 IPR036192 Cell division protein ZapA-like superfamily ISU55_15790 IPR023771 Cell division protein ZapA, eubacteria ISU55_15800 IPR002698 5-formyltetrahydrofolate cyclo-ligase ISU55_15800 IPR037171 NagB/RpiA transferase-like ISU55_15800 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ISU55_15810 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ISU55_15810 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ISU55_15810 IPR036291 NAD(P)-binding domain superfamily ISU55_15810 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU55_15810 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ISU55_15810 IPR002912 ACT domain ISU55_15815 IPR037171 NagB/RpiA transferase-like ISU55_15815 IPR004788 Ribose 5-phosphate isomerase, type A ISU55_15815 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup ISU55_15820 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria ISU55_15820 IPR005119 LysR, substrate-binding ISU55_15820 IPR000847 Transcription regulator HTH, LysR ISU55_15820 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_15820 IPR036390 Winged helix DNA-binding domain superfamily ISU55_15820 IPR017685 HTH-type transcriptional regulator ArgP ISU55_15825 IPR007497 Protein of unknown function DUF541 ISU55_15830 IPR004777 L-lysine exporter/arginine exporter ISU55_15830 IPR001123 Amino acid exporter protein, LeuE-type ISU55_15830 IPR023445 Arginine exporter protein ArgO, enterobacteria ISU55_15835 IPR023408 Mechanosensitive ion channel MscS domain superfamily ISU55_15835 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ISU55_15835 IPR006686 Mechanosensitive ion channel MscS, conserved site ISU55_15835 IPR010920 LSM domain superfamily ISU55_15835 IPR006685 Mechanosensitive ion channel MscS ISU55_15835 IPR011066 Mechanosensitive ion channel MscS, C-terminal ISU55_15835 IPR008910 Conserved TM helix ISU55_15845 IPR000771 Fructose-bisphosphate aldolase, class-II ISU55_15845 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype ISU55_15845 IPR013785 Aldolase-type TIM barrel ISU55_15850 IPR015911 Phosphoglycerate kinase, conserved site ISU55_15850 IPR001576 Phosphoglycerate kinase ISU55_15850 IPR036043 Phosphoglycerate kinase superfamily ISU55_15850 IPR015824 Phosphoglycerate kinase, N-terminal ISU55_15855 IPR006422 D-erythrose-4-phosphate dehydrogenase ISU55_15855 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site ISU55_15855 IPR036291 NAD(P)-binding domain superfamily ISU55_15855 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family ISU55_15855 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain ISU55_15855 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain ISU55_15865 IPR006120 Resolvase, HTH domain ISU55_15865 IPR012337 Ribonuclease H-like superfamily ISU55_15865 IPR036397 Ribonuclease H superfamily ISU55_15865 IPR017894 HTH domain, IS21 transposase-type ISU55_15865 IPR001584 Integrase, catalytic core ISU55_15870 IPR003593 AAA+ ATPase domain ISU55_15870 IPR001270 ClpA/B family ISU55_15870 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_15870 IPR002611 IstB-like ATP-binding protein ISU55_15870 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15880 IPR033248 Transketolase, C-terminal domain ISU55_15880 IPR029061 Thiamin diphosphate-binding fold ISU55_15880 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ISU55_15880 IPR005475 Transketolase-like, pyrimidine-binding domain ISU55_15880 IPR005478 Transketolase, bacterial-like ISU55_15880 IPR020826 Transketolase binding site ISU55_15880 IPR033247 Transketolase family ISU55_15880 IPR005474 Transketolase, N-terminal ISU55_15885 IPR001915 Peptidase M48 ISU55_15900 IPR002985 Arginine decarboxylase ISU55_15900 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ISU55_15900 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ISU55_15900 IPR041128 Arginine decarboxylase, C-terminal helical ISU55_15900 IPR000183 Ornithine/DAP/Arg decarboxylase ISU55_15900 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal ISU55_15900 IPR040634 Arginine decarboxylase, helical bundle domain ISU55_15900 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ISU55_15900 IPR029066 PLP-binding barrel ISU55_15905 IPR022628 S-adenosylmethionine synthetase, N-terminal ISU55_15905 IPR022631 S-adenosylmethionine synthetase, conserved site ISU55_15905 IPR022630 S-adenosylmethionine synthetase, C-terminal ISU55_15905 IPR022629 S-adenosylmethionine synthetase, central domain ISU55_15905 IPR002133 S-adenosylmethionine synthetase ISU55_15905 IPR022636 S-adenosylmethionine synthetase superfamily ISU55_15910 IPR023483 Uncharacterised protein family SprT ISU55_15910 IPR035240 SprT-like, zinc ribbon domain ISU55_15910 IPR006640 SprT-like ISU55_15915 IPR007346 Endonuclease I ISU55_15920 IPR015947 PUA-like superfamily ISU55_15920 IPR029028 Alpha/beta knot methyltransferases ISU55_15920 IPR006700 Ribosomal RNA small subunit methyltransferase E ISU55_15920 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_15925 IPR011761 ATP-grasp fold ISU55_15925 IPR013815 ATP-grasp fold, subdomain 1 ISU55_15925 IPR006284 Glutathione synthetase, prokaryotic ISU55_15925 IPR004218 Prokaryotic glutathione synthetase, ATP-binding ISU55_15925 IPR004215 Prokaryotic glutathione synthetase, N-terminal ISU55_15925 IPR016185 Pre-ATP-grasp domain superfamily ISU55_15930 IPR003774 Protein of unknown function UPF0301 ISU55_15935 IPR037027 YqgF/RNase H-like domain superfamily ISU55_15935 IPR012337 Ribonuclease H-like superfamily ISU55_15935 IPR006641 YqgF/RNase H-like domain ISU55_15935 IPR005227 Putative pre-16S rRNA nuclease ISU55_15940 IPR023719 Aliphatic amidase ISU55_15940 IPR003010 Carbon-nitrogen hydrolase ISU55_15940 IPR036526 Carbon-nitrogen hydrolase superfamily ISU55_15945 IPR017754 Agmatine deiminase ISU55_15945 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type ISU55_15950 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_15950 IPR006321 Pilus retraction protein PilT ISU55_15950 IPR001482 Type II/IV secretion system protein ISU55_15950 IPR003593 AAA+ ATPase domain ISU55_15955 IPR011078 Pyridoxal phosphate homeostasis protein ISU55_15955 IPR001608 Alanine racemase, N-terminal ISU55_15955 IPR029066 PLP-binding barrel ISU55_15960 IPR036291 NAD(P)-binding domain superfamily ISU55_15960 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ISU55_15960 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_15960 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain ISU55_15960 IPR000304 Pyrroline-5-carboxylate reductase ISU55_15965 IPR003425 CCB3/YggT ISU55_15970 IPR036591 YggU-like superfamily ISU55_15970 IPR003746 Protein of unknown function DUF167 ISU55_15970 IPR005228 Conserved hypothetical protein CHP00251 ISU55_15975 IPR020922 dITP/XTP pyrophosphatase ISU55_15975 IPR002637 Ham1-like protein ISU55_15975 IPR029001 Inosine triphosphate pyrophosphatase-like ISU55_15980 IPR023404 Radical SAM, alpha/beta horseshoe ISU55_15980 IPR007197 Radical SAM ISU55_15980 IPR004559 Heme chaperone HemW-like ISU55_15980 IPR010723 HemN, C-terminal ISU55_15980 IPR006638 Elp3/MiaB/NifB ISU55_15980 IPR034505 Anaerobic coproporphyrinogen-III oxidase ISU55_15985 IPR011509 RtxA toxin ISU55_15985 IPR022742 Serine aminopeptidase, S33 ISU55_15985 IPR011049 Serralysin-like metalloprotease, C-terminal ISU55_15985 IPR032074 Actin cross-linking domain ISU55_15985 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain ISU55_15985 IPR020974 CGT/MARTX, cysteine protease (CPD) domain ISU55_15985 IPR029058 Alpha/Beta hydrolase fold ISU55_15985 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily ISU55_15995 IPR021307 Protein of unknown function DUF2884 ISU55_16000 IPR021307 Protein of unknown function DUF2884 ISU55_16005 IPR015868 Glutaminase ISU55_16005 IPR012338 Beta-lactamase/transpeptidase-like ISU55_16010 IPR007416 Protein of unknown function DUF469 ISU55_16015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_16015 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type ISU55_16020 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_16020 IPR029119 MutY, C-terminal ISU55_16020 IPR000445 Helix-hairpin-helix motif ISU55_16020 IPR003265 HhH-GPD domain ISU55_16020 IPR004035 Endonuclease III, iron-sulphur binding site ISU55_16020 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif ISU55_16020 IPR004036 Endonuclease III-like, conserved site-2 ISU55_16020 IPR011257 DNA glycosylase ISU55_16020 IPR005760 A/G-specific adenine glycosylase MutY ISU55_16020 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ISU55_16025 IPR036766 Fe(II) trafficking protein YggX superfamily ISU55_16025 IPR007457 Fe(II) trafficking protein YggX ISU55_16030 IPR024570 Murein transglycosylase-C, N-terminal ISU55_16030 IPR000189 Prokaryotic transglycosylase, active site ISU55_16030 IPR023346 Lysozyme-like domain superfamily ISU55_16030 IPR023664 Murein transglycosylase-C ISU55_16030 IPR008258 Transglycosylase SLT domain 1 ISU55_16040 IPR039423 TonB-dependent receptor-like ISU55_16040 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_16040 IPR012910 TonB-dependent receptor, plug domain ISU55_16045 IPR001851 ABC transporter, permease ISU55_16050 IPR003593 AAA+ ATPase domain ISU55_16050 IPR015861 ABC transporter, ribose import, RbsA ISU55_16050 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16050 IPR003439 ABC transporter-like ISU55_16050 IPR017871 ABC transporter, conserved site ISU55_16055 IPR028082 Periplasmic binding protein-like I ISU55_16055 IPR025997 Periplasmic binding protein ISU55_16060 IPR027464 Ornithine decarboxylase, N-terminal ISU55_16060 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal ISU55_16060 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal ISU55_16060 IPR011193 Ornithine/lysine/arginine decarboxylase ISU55_16060 IPR000310 Orn/Lys/Arg decarboxylase, major domain ISU55_16060 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_16060 IPR011006 CheY-like superfamily ISU55_16060 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily ISU55_16060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_16060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_16120 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ISU55_16120 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ISU55_16120 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ISU55_16120 IPR006531 Gp5 N-terminal ISU55_16120 IPR037026 Vgr protein, OB-fold domain superfamily ISU55_16120 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ISU55_16125 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16125 IPR003593 AAA+ ATPase domain ISU55_16125 IPR018368 ClpA/B, conserved site 1 ISU55_16125 IPR001270 ClpA/B family ISU55_16125 IPR004176 Clp, N-terminal ISU55_16125 IPR036628 Clp, N-terminal domain superfamily ISU55_16125 IPR019489 Clp ATPase, C-terminal ISU55_16125 IPR017729 Type VI secretion system, ATPase ClpV1 ISU55_16125 IPR003959 ATPase, AAA-type, core ISU55_16125 IPR041546 ClpA/ClpB, AAA lid domain ISU55_16135 IPR006690 Outer membrane protein, OmpA-like, conserved site ISU55_16135 IPR006664 Outer membrane protein, bacterial ISU55_16135 IPR028974 TSP type-3 repeat ISU55_16135 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_16135 IPR006665 OmpA-like domain ISU55_16135 IPR036737 OmpA-like domain superfamily ISU55_16135 IPR008722 Outer membrane porin F, N-terminal ISU55_16150 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU55_16170 IPR003675 CAAX prenyl protease 2 ISU55_16175 IPR001690 Autoinducer synthase ISU55_16175 IPR018311 Autoinducer synthesis, conserved site ISU55_16175 IPR016181 Acyl-CoA N-acyltransferase ISU55_16180 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain ISU55_16180 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_16180 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily ISU55_16180 IPR000792 Transcription regulator LuxR, C-terminal ISU55_16180 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_16210 IPR016181 Acyl-CoA N-acyltransferase ISU55_16210 IPR019432 Siderophore biosynthesis protein, conserved domain ISU55_16215 IPR022770 Ferric iron reductase FhuF domain ISU55_16215 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like ISU55_16215 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal ISU55_16220 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ISU55_16220 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_16225 IPR010105 TonB-dependent siderophore receptor ISU55_16225 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_16225 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_16225 IPR010916 TonB box, conserved site ISU55_16225 IPR039426 Vitamin B12 transporter BtuB-like ISU55_16225 IPR012910 TonB-dependent receptor, plug domain ISU55_16225 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_16225 IPR010917 TonB-dependent receptor, conserved site ISU55_16230 IPR018043 Sodium:galactoside symporter, conserved site ISU55_16230 IPR039672 Lactose permease-like ISU55_16230 IPR020846 Major facilitator superfamily domain ISU55_16230 IPR036259 MFS transporter superfamily ISU55_16230 IPR001927 Sodium:galactoside symporter ISU55_16240 IPR001610 PAC motif ISU55_16240 IPR000014 PAS domain ISU55_16240 IPR000700 PAS-associated, C-terminal ISU55_16240 IPR035965 PAS domain superfamily ISU55_16240 IPR029787 Nucleotide cyclase ISU55_16240 IPR035919 EAL domain superfamily ISU55_16240 IPR013656 PAS fold-4 ISU55_16240 IPR001633 EAL domain ISU55_16240 IPR000160 GGDEF domain ISU55_16240 IPR013655 PAS fold-3 ISU55_16250 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_16250 IPR006143 RND efflux pump, membrane fusion protein ISU55_16255 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ISU55_16255 IPR001036 Acriflavin resistance protein ISU55_16255 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 ISU55_16260 IPR002110 Ankyrin repeat ISU55_16260 IPR012927 ShET2 enterotoxin, N-terminal ISU55_16260 IPR036770 Ankyrin repeat-containing domain superfamily ISU55_16270 IPR011050 Pectin lyase fold/virulence factor ISU55_16270 IPR006315 Outer membrane autotransporter barrel ISU55_16270 IPR036709 Autotransporter beta-domain superfamily ISU55_16270 IPR005546 Autotransporter beta-domain ISU55_16275 IPR032675 Leucine-rich repeat domain superfamily ISU55_16275 IPR032674 LRR-containing bacterial E3 ligase, N-terminal ISU55_16275 IPR029487 Novel E3 ligase domain ISU55_16285 IPR029487 Novel E3 ligase domain ISU55_16285 IPR032674 LRR-containing bacterial E3 ligase, N-terminal ISU55_16285 IPR032675 Leucine-rich repeat domain superfamily ISU55_16285 IPR029487 Novel E3 ligase domain ISU55_16285 IPR032674 LRR-containing bacterial E3 ligase, N-terminal ISU55_16285 IPR032675 Leucine-rich repeat domain superfamily ISU55_16290 IPR032674 LRR-containing bacterial E3 ligase, N-terminal ISU55_16290 IPR029487 Novel E3 ligase domain ISU55_16290 IPR032675 Leucine-rich repeat domain superfamily ISU55_16295 IPR011540 AbgT, Proteobacteria ISU55_16295 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT ISU55_16300 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ISU55_16300 IPR002933 Peptidase M20 ISU55_16300 IPR011650 Peptidase M20, dimerisation domain ISU55_16300 IPR036264 Bacterial exopeptidase dimerisation domain ISU55_16300 IPR010161 Peptidase M20B, tripeptide aminopeptidase ISU55_16305 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_16305 IPR012910 TonB-dependent receptor, plug domain ISU55_16305 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_16305 IPR010105 TonB-dependent siderophore receptor ISU55_16305 IPR039426 Vitamin B12 transporter BtuB-like ISU55_16315 IPR012337 Ribonuclease H-like superfamily ISU55_16315 IPR006120 Resolvase, HTH domain ISU55_16315 IPR001584 Integrase, catalytic core ISU55_16315 IPR017894 HTH domain, IS21 transposase-type ISU55_16315 IPR036397 Ribonuclease H superfamily ISU55_16320 IPR002611 IstB-like ATP-binding protein ISU55_16320 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_16320 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16320 IPR001270 ClpA/B family ISU55_16320 IPR003593 AAA+ ATPase domain ISU55_16325 IPR020845 AMP-binding, conserved site ISU55_16325 IPR042099 AMP-dependent synthetase-like superfamily ISU55_16325 IPR000873 AMP-dependent synthetase/ligase ISU55_16325 IPR036736 ACP-like superfamily ISU55_16325 IPR010071 Amino acid adenylation domain ISU55_16325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_16325 IPR001242 Condensation domain ISU55_16325 IPR006162 Phosphopantetheine attachment site ISU55_16325 IPR009081 Phosphopantetheine binding ACP domain ISU55_16325 IPR020806 Polyketide synthase, phosphopantetheine-binding domain ISU55_16325 IPR013217 Methyltransferase type 12 ISU55_16325 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ISU55_16330 IPR025110 AMP-binding enzyme, C-terminal domain ISU55_16330 IPR036736 ACP-like superfamily ISU55_16330 IPR010071 Amino acid adenylation domain ISU55_16330 IPR000873 AMP-dependent synthetase/ligase ISU55_16330 IPR042099 AMP-dependent synthetase-like superfamily ISU55_16330 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ISU55_16330 IPR001242 Condensation domain ISU55_16330 IPR009081 Phosphopantetheine binding ACP domain ISU55_16330 IPR020845 AMP-binding, conserved site ISU55_16335 IPR006162 Phosphopantetheine attachment site ISU55_16335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_16335 IPR020806 Polyketide synthase, phosphopantetheine-binding domain ISU55_16335 IPR010071 Amino acid adenylation domain ISU55_16335 IPR036736 ACP-like superfamily ISU55_16335 IPR020845 AMP-binding, conserved site ISU55_16335 IPR000873 AMP-dependent synthetase/ligase ISU55_16335 IPR042099 AMP-dependent synthetase-like superfamily ISU55_16335 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ISU55_16335 IPR001242 Condensation domain ISU55_16335 IPR013217 Methyltransferase type 12 ISU55_16335 IPR009081 Phosphopantetheine binding ACP domain ISU55_16350 IPR020802 Polyketide synthase, thioesterase domain ISU55_16350 IPR001031 Thioesterase ISU55_16350 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ISU55_16350 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS ISU55_16350 IPR029058 Alpha/Beta hydrolase fold ISU55_16360 IPR013113 FAD-binding 9, siderophore-interacting ISU55_16360 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_16360 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_16360 IPR007037 Siderophore-interacting protein, C-terminal domain ISU55_16360 IPR003439 ABC transporter-like ISU55_16360 IPR011527 ABC transporter type 1, transmembrane domain ISU55_16360 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_16360 IPR017938 Riboflavin synthase-like beta-barrel ISU55_16360 IPR003593 AAA+ ATPase domain ISU55_16360 IPR017871 ABC transporter, conserved site ISU55_16360 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16365 IPR003593 AAA+ ATPase domain ISU55_16365 IPR039421 Type I protein exporter ISU55_16365 IPR011527 ABC transporter type 1, transmembrane domain ISU55_16365 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16365 IPR017871 ABC transporter, conserved site ISU55_16365 IPR011917 ABC transporter, lipid A export, MsbA ISU55_16365 IPR003439 ABC transporter-like ISU55_16380 IPR003474 Gluconate transporter ISU55_16390 IPR006315 Outer membrane autotransporter barrel ISU55_16390 IPR011050 Pectin lyase fold/virulence factor ISU55_16390 IPR013425 Autotransporter-associated beta strand repeat ISU55_16390 IPR036709 Autotransporter beta-domain superfamily ISU55_16390 IPR005546 Autotransporter beta-domain ISU55_16390 IPR012332 P22 tailspike-like, C-terminal domain superfamily ISU55_16395 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ISU55_16395 IPR006531 Gp5 N-terminal ISU55_16395 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ISU55_16395 IPR037026 Vgr protein, OB-fold domain superfamily ISU55_16405 IPR022385 Rhs repeat-associated core ISU55_16405 IPR031325 RHS repeat ISU55_16405 IPR006530 YD repeat ISU55_16405 IPR001826 RHS protein ISU55_16420 IPR001898 Solute carrier family 13 ISU55_16420 IPR031312 Sodium/sulphate symporter, conserved site ISU55_16425 IPR028082 Periplasmic binding protein-like I ISU55_16425 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_16425 IPR000843 LacI-type HTH domain ISU55_16440 IPR001029 Flagellin, D0/D1 domain ISU55_16440 IPR042187 Flagellin, C-terminal domain, subdomain 2 ISU55_16440 IPR001492 Flagellin ISU55_16445 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_16445 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_16445 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_16445 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_16445 IPR040970 CadC C-terminal domain 1 ISU55_16445 IPR039420 Transcriptional regulatory protein WalR-like ISU55_16465 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_16465 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_16465 IPR002371 Flagellar hook-associated protein 1 ISU55_16475 IPR001782 Flagellar P-ring protein ISU55_16480 IPR000527 Flagellar L-ring protein ISU55_16485 IPR019776 Flagellar basal body rod protein, conserved site ISU55_16485 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_16485 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ISU55_16485 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ISU55_16485 IPR012834 Flagellar basal-body rod FlgG ISU55_16485 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_16490 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ISU55_16490 IPR019776 Flagellar basal body rod protein, conserved site ISU55_16490 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_16490 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ISU55_16490 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_16495 IPR011491 Flagellar hook protein FlgE ISU55_16495 IPR037058 Flagellar hook protein FlgE superfamily ISU55_16495 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ISU55_16495 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ISU55_16495 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_16495 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_16495 IPR019776 Flagellar basal body rod protein, conserved site ISU55_16500 IPR025963 FlgD Tudor-like domain ISU55_16500 IPR025965 FlgD Ig-like domain ISU55_16500 IPR005648 Flagellar hook capping protein ISU55_16505 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ISU55_16505 IPR006299 Flagellar basal-body rod protein FlgC ISU55_16505 IPR019776 Flagellar basal body rod protein, conserved site ISU55_16505 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_16510 IPR001444 Flagellar basal body rod protein, N-terminal ISU55_16510 IPR019776 Flagellar basal body rod protein, conserved site ISU55_16510 IPR006300 Flagellar basal-body rod protein FlgB ISU55_16515 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ISU55_16515 IPR039246 Flagellar protein FlgA ISU55_16515 IPR013974 SAF domain ISU55_16535 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ISU55_16535 IPR003593 AAA+ ATPase domain ISU55_16535 IPR040627 T3SS EscN ATPase, C-terminal ISU55_16535 IPR005714 ATPase, type III secretion system, FliI/YscN ISU55_16535 IPR032463 ATPase, type III secretion system, FliI ISU55_16535 IPR020005 Flagellar export ATPase FliI, clade 1 ISU55_16535 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16535 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ISU55_16550 IPR013556 Flagellar M-ring C-terminal ISU55_16550 IPR000067 Flagellar M-ring protein FliF ISU55_16550 IPR006182 Secretory protein YscJ/FliF ISU55_16555 IPR001624 Flagellar hook-basal body complex protein FliE ISU55_16560 IPR009057 Homeobox-like domain superfamily ISU55_16560 IPR002078 RNA polymerase sigma factor 54 interaction domain ISU55_16560 IPR011006 CheY-like superfamily ISU55_16560 IPR002197 DNA binding HTH domain, Fis-type ISU55_16560 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16560 IPR003593 AAA+ ATPase domain ISU55_16560 IPR025944 Sigma-54 interaction domain, conserved site ISU55_16560 IPR001789 Signal transduction response regulator, receiver domain ISU55_16560 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ISU55_16560 IPR029995 Transcriptional activator SfnR/FlbD ISU55_16560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_16570 IPR036429 SpoA-like superfamily ISU55_16570 IPR001543 Surface presentation of antigen (SpoA) ISU55_16570 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb ISU55_16570 IPR012826 Flagellar motor switch FliN ISU55_16575 IPR005838 Type III secretion system inner membrane P protein ISU55_16575 IPR005837 Flagellar transport protein FliP ISU55_16580 IPR002191 Bacterial export protein family 3 ISU55_16580 IPR006305 Flagellar biosynthesis protein FliQ ISU55_16585 IPR006303 Flagellar biosynthesis protein FliR ISU55_16585 IPR002010 Type III secretion system inner membrane R protein ISU55_16590 IPR006135 Type III secretion system substrate exporter ISU55_16590 IPR029025 Type III secretion system substrate exporter, C-terminal ISU55_16590 IPR006136 Flagellar biosynthetic protein FlhB ISU55_16610 IPR002491 ABC transporter periplasmic binding domain ISU55_16615 IPR036937 Fimbrial-type adhesion domain superfamily ISU55_16615 IPR000259 Fimbrial-type adhesion domain ISU55_16615 IPR015303 Fimbrial adhesin F17-AG, lectin domain ISU55_16615 IPR008966 Adhesion domain superfamily ISU55_16620 IPR016147 Pili assembly chaperone, N-terminal ISU55_16620 IPR001829 Pili assembly chaperone, bacterial ISU55_16620 IPR018046 Pili assembly chaperone, conserved site ISU55_16620 IPR008962 PapD-like superfamily ISU55_16620 IPR013783 Immunoglobulin-like fold ISU55_16620 IPR016148 Pili assembly chaperone, C-terminal ISU55_16620 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_16625 IPR000015 Outer membrane usher protein ISU55_16625 IPR042186 Outer membrane usher protein FimD, plug domain ISU55_16625 IPR025949 PapC-like, C-terminal domain ISU55_16625 IPR025885 PapC, N-terminal domain ISU55_16625 IPR037224 PapC, N-terminal domain superfamily ISU55_16625 IPR018030 Fimbrial membrane usher, conserved site ISU55_16630 IPR002686 Transposase IS200-like ISU55_16630 IPR036515 Transposase IS200-like superfamily ISU55_16645 IPR007055 BON domain ISU55_16645 IPR032789 Pilus formation protein, N-terminal ISU55_16645 IPR001775 GspD/PilQ family ISU55_16645 IPR004846 Type II/III secretion system ISU55_16645 IPR014004 Transport-associated and nodulation domain, bacteria ISU55_16650 IPR001775 GspD/PilQ family ISU55_16650 IPR004846 Type II/III secretion system ISU55_16650 IPR014004 Transport-associated and nodulation domain, bacteria ISU55_16650 IPR032789 Pilus formation protein, N-terminal ISU55_16650 IPR007055 BON domain ISU55_16665 IPR022399 Helicase/secretion neighbourhood ATPase ISU55_16665 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16665 IPR001482 Type II/IV secretion system protein ISU55_16700 IPR014170 TonB system transport protein ExbD type-1 ISU55_16700 IPR003400 Biopolymer transport protein ExbD/TolR ISU55_16705 IPR014164 TonB-system energizer ExbB type-1 ISU55_16705 IPR002898 MotA/TolQ/ExbB proton channel ISU55_16710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_16710 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_16710 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ISU55_16710 IPR006233 Cystathionine beta-lyase, bacterial ISU55_16710 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_16715 IPR032818 DedA family ISU55_16715 IPR032816 SNARE associated Golgi protein ISU55_16720 IPR018060 DNA binding HTH domain, AraC-type ISU55_16720 IPR009594 Transcription regulator HTH, AraC, N-terminal ISU55_16720 IPR009057 Homeobox-like domain superfamily ISU55_16725 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ISU55_16725 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ISU55_16735 IPR018170 Aldo/keto reductase, conserved site ISU55_16735 IPR023210 NADP-dependent oxidoreductase domain ISU55_16735 IPR036812 NADP-dependent oxidoreductase domain superfamily ISU55_16735 IPR020471 Aldo/keto reductase ISU55_16745 IPR011706 Multicopper oxidase, type 2 ISU55_16745 IPR006311 Twin-arginine translocation pathway, signal sequence ISU55_16745 IPR011707 Multicopper oxidase, type 3 ISU55_16745 IPR008972 Cupredoxin ISU55_16745 IPR026589 Cell division protein FtsP ISU55_16750 IPR002123 Phospholipid/glycerol acyltransferase ISU55_16750 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase ISU55_16755 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative ISU55_16755 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat ISU55_16755 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal ISU55_16755 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ISU55_16755 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta ISU55_16755 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily ISU55_16755 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ISU55_16770 IPR000847 Transcription regulator HTH, LysR ISU55_16770 IPR005119 LysR, substrate-binding ISU55_16770 IPR036390 Winged helix DNA-binding domain superfamily ISU55_16770 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_16775 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 ISU55_16775 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ISU55_16775 IPR001241 DNA topoisomerase, type IIA ISU55_16775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_16775 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_16775 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_16775 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal ISU55_16775 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative ISU55_16775 IPR018522 DNA topoisomerase, type IIA, conserved site ISU55_16775 IPR002288 DNA gyrase B subunit, C-terminal ISU55_16775 IPR006171 TOPRIM domain ISU55_16775 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_16780 IPR029058 Alpha/Beta hydrolase fold ISU55_16780 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ISU55_16785 IPR029052 Metallo-dependent phosphatase-like ISU55_16785 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ISU55_16785 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA ISU55_16790 IPR009659 Protein of unknown function DUF1249 ISU55_16795 IPR004385 Nucleoside diphosphate pyrophosphatase ISU55_16795 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_16795 IPR020084 NUDIX hydrolase, conserved site ISU55_16795 IPR000086 NUDIX hydrolase domain ISU55_16800 IPR003423 Outer membrane efflux protein ISU55_16800 IPR010130 Type I secretion outer membrane protein, TolC ISU55_16805 IPR009576 Biofilm formation YgiB ISU55_16810 IPR016185 Pre-ATP-grasp domain superfamily ISU55_16810 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain ISU55_16815 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B ISU55_16815 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type ISU55_16820 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ISU55_16820 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB ISU55_16825 IPR007475 Ubiquinone biosynthesis accessory factor UbiK ISU55_16835 IPR002293 Amino acid/polyamine transporter I ISU55_16840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_16840 IPR029056 Ribokinase-like ISU55_16840 IPR011914 RfaE bifunctional protein, domain II ISU55_16840 IPR011913 RfaE bifunctional protein, domain I ISU55_16840 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_16840 IPR023030 Bifunctional protein HldE ISU55_16840 IPR011611 Carbohydrate kinase PfkB ISU55_16840 IPR004821 Cytidyltransferase-like domain ISU55_16845 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme ISU55_16845 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain ISU55_16845 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase ISU55_16850 IPR007899 CHAD domain ISU55_16850 IPR033469 CYTH-like domain superfamily ISU55_16850 IPR039013 Inorganic triphosphatase YgiF ISU55_16850 IPR023577 CYTH domain ISU55_16855 IPR003646 SH3-like domain, bacterial-type ISU55_16855 IPR016476 SH3 domain protein ISU55_16860 IPR012006 tRNA nucleotidyltransferase, proteobacteria ISU55_16860 IPR002646 Poly A polymerase, head domain ISU55_16860 IPR006674 HD domain ISU55_16860 IPR003607 HD/PDEase domain ISU55_16860 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain ISU55_16865 IPR003824 Undecaprenyl-diphosphatase UppP ISU55_16870 IPR006157 Dihydroneopterin aldolase/epimerase domain ISU55_16870 IPR006156 Dihydroneopterin aldolase ISU55_16875 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY ISU55_16880 IPR000905 Gcp-like domain ISU55_16880 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD ISU55_16880 IPR017861 Kae1/TsaD family ISU55_16880 IPR017860 Peptidase M22, conserved site ISU55_16885 IPR001911 Ribosomal protein S21 ISU55_16885 IPR018278 Ribosomal protein S21, conserved site ISU55_16885 IPR038380 Ribosomal protein S21 superfamily ISU55_16890 IPR013173 DNA primase DnaG, DnaB-binding domain ISU55_16890 IPR030846 DNA primase DnaG, bacteria ISU55_16890 IPR006295 DNA primase, DnaG ISU55_16890 IPR034151 Bacterial DnaG primase, TOPRIM domain ISU55_16890 IPR019475 DNA primase, DnaB-helicase binding domain ISU55_16890 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ISU55_16890 IPR013264 DNA primase, catalytic core, N-terminal ISU55_16890 IPR036977 DNA Primase, CHC2-type zinc finger ISU55_16890 IPR006171 TOPRIM domain ISU55_16890 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ISU55_16890 IPR002694 Zinc finger, CHC2-type ISU55_16895 IPR000943 RNA polymerase sigma-70 ISU55_16895 IPR009042 RNA polymerase sigma-70 region 1.2 ISU55_16895 IPR007627 RNA polymerase sigma-70 region 2 ISU55_16895 IPR007127 RNA polymerase sigma factor 70, region 1.1 ISU55_16895 IPR007624 RNA polymerase sigma-70 region 3 ISU55_16895 IPR013325 RNA polymerase sigma factor, region 2 ISU55_16895 IPR007631 RNA polymerase sigma factor 70, non-essential domain ISU55_16895 IPR013324 RNA polymerase sigma factor, region 3/4-like ISU55_16895 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_16895 IPR028630 RNA polymerase sigma factor RpoD ISU55_16895 IPR012760 RNA polymerase sigma factor RpoD, C-terminal ISU55_16895 IPR007630 RNA polymerase sigma-70 region 4 ISU55_16895 IPR042189 Sigma-70 factor, region 1.1 superfamily ISU55_16895 IPR014284 RNA polymerase sigma-70 like domain ISU55_16905 IPR017894 HTH domain, IS21 transposase-type ISU55_16905 IPR001584 Integrase, catalytic core ISU55_16905 IPR012337 Ribonuclease H-like superfamily ISU55_16905 IPR006120 Resolvase, HTH domain ISU55_16905 IPR036397 Ribonuclease H superfamily ISU55_16910 IPR003593 AAA+ ATPase domain ISU55_16910 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_16910 IPR001270 ClpA/B family ISU55_16910 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_16910 IPR002611 IstB-like ATP-binding protein ISU55_16950 IPR036390 Winged helix DNA-binding domain superfamily ISU55_16950 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_16950 IPR000847 Transcription regulator HTH, LysR ISU55_16950 IPR005119 LysR, substrate-binding ISU55_16970 IPR006056 RidA family ISU55_16970 IPR019897 RidA, conserved site ISU55_16970 IPR035959 RutC-like superfamily ISU55_16970 IPR006175 YjgF/YER057c/UK114 family ISU55_16990 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ISU55_16990 IPR004839 Aminotransferase, class I/classII ISU55_16990 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_16990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_16990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_17005 IPR005694 Efflux pump membrane protein ISU55_17005 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_17005 IPR030196 Multidrug resistance protein MdtN ISU55_17010 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein ISU55_17020 IPR026891 Fibronectin type III-like domain ISU55_17020 IPR019800 Glycoside hydrolase, family 3, active site ISU55_17020 IPR002772 Glycoside hydrolase family 3 C-terminal domain ISU55_17020 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily ISU55_17020 IPR001764 Glycoside hydrolase, family 3, N-terminal ISU55_17020 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily ISU55_17020 IPR013783 Immunoglobulin-like fold ISU55_17020 IPR017853 Glycoside hydrolase superfamily ISU55_17030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_17030 IPR035906 MetI-like superfamily ISU55_17035 IPR035906 MetI-like superfamily ISU55_17035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_17040 IPR006059 Bacterial extracellular solute-binding protein ISU55_17045 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_17045 IPR028082 Periplasmic binding protein-like I ISU55_17045 IPR000843 LacI-type HTH domain ISU55_17050 IPR012341 Six-hairpin glycosidase-like superfamily ISU55_17050 IPR008928 Six-hairpin glycosidase superfamily ISU55_17050 IPR033432 Glycosyl hydrolase 36, catalytic domain ISU55_17055 IPR040582 MalK, OB fold domain ISU55_17055 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17055 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_17055 IPR017871 ABC transporter, conserved site ISU55_17055 IPR003439 ABC transporter-like ISU55_17055 IPR003593 AAA+ ATPase domain ISU55_17055 IPR005116 Transport-associated OB, type 1 ISU55_17075 IPR008638 Filamentous haemagglutinin, N-terminal ISU55_17075 IPR024973 ESPR domain ISU55_17075 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ISU55_17075 IPR025157 Hemagglutinin repeat ISU55_17075 IPR012334 Pectin lyase fold ISU55_17075 IPR011050 Pectin lyase fold/virulence factor ISU55_17075 IPR006914 VENN motif-containing domain ISU55_17080 IPR012334 Pectin lyase fold ISU55_17080 IPR024973 ESPR domain ISU55_17080 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ISU55_17080 IPR008638 Filamentous haemagglutinin, N-terminal ISU55_17080 IPR025157 Hemagglutinin repeat ISU55_17080 IPR011050 Pectin lyase fold/virulence factor ISU55_17080 IPR006914 VENN motif-containing domain ISU55_17095 IPR006914 VENN motif-containing domain ISU55_17095 IPR025157 Hemagglutinin repeat ISU55_17095 IPR033799 CDI toxin, EC869-like ISU55_17100 IPR033799 CDI toxin, EC869-like ISU55_17100 IPR006914 VENN motif-containing domain ISU55_17100 IPR025157 Hemagglutinin repeat ISU55_17110 IPR008638 Filamentous haemagglutinin, N-terminal ISU55_17110 IPR025157 Hemagglutinin repeat ISU55_17110 IPR012334 Pectin lyase fold ISU55_17110 IPR011050 Pectin lyase fold/virulence factor ISU55_17110 IPR006914 VENN motif-containing domain ISU55_17110 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ISU55_17110 IPR024973 ESPR domain ISU55_17115 IPR013686 Polypeptide-transport-associated, ShlB-type ISU55_17115 IPR035251 ShlB, POTRA domain ISU55_17115 IPR034746 POTRA domain ISU55_17115 IPR005565 Haemolysin activator HlyB, C-terminal ISU55_17115 IPR027282 Two partner secretion pathway transporter ISU55_17120 IPR011392 Tellurite resistance, TerY ISU55_17120 IPR036465 von Willebrand factor A-like domain superfamily ISU55_17120 IPR002035 von Willebrand factor, type A ISU55_17125 IPR003325 TerD domain ISU55_17135 IPR036465 von Willebrand factor A-like domain superfamily ISU55_17135 IPR011392 Tellurite resistance, TerY ISU55_17135 IPR002035 von Willebrand factor, type A ISU55_17150 IPR005325 Protein of unknown function DUF308, membrane ISU55_17155 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_17155 IPR013785 Aldolase-type TIM barrel ISU55_17155 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal ISU55_17155 IPR023753 FAD/NAD(P)-binding domain ISU55_17160 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD ISU55_17160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_17160 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_17160 IPR007848 Methyltransferase small domain ISU55_17165 IPR005546 Autotransporter beta-domain ISU55_17165 IPR036709 Autotransporter beta-domain superfamily ISU55_17165 IPR006315 Outer membrane autotransporter barrel ISU55_17165 IPR011050 Pectin lyase fold/virulence factor ISU55_17170 IPR002725 Protein of unknown function DUF45 ISU55_17175 IPR000683 Oxidoreductase, N-terminal ISU55_17175 IPR036291 NAD(P)-binding domain superfamily ISU55_17180 IPR001991 Sodium:dicarboxylate symporter ISU55_17180 IPR036458 Sodium:dicarboxylate symporter superfamily ISU55_17180 IPR023025 Serine/threonine transporter SstT ISU55_17185 IPR002686 Transposase IS200-like ISU55_17185 IPR036515 Transposase IS200-like superfamily ISU55_17190 IPR019629 Uncharacterised protein family HI1736/YgjV ISU55_17190 IPR026267 Inner membrane protein YgjV ISU55_17195 IPR007392 D-galactarate/Altronate dehydratase, C-terminal ISU55_17195 IPR013974 SAF domain ISU55_17200 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_17200 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_17200 IPR023668 Altronate oxidoreductase ISU55_17200 IPR013118 Mannitol dehydrogenase, C-terminal ISU55_17200 IPR013131 Mannitol dehydrogenase, N-terminal ISU55_17200 IPR036291 NAD(P)-binding domain superfamily ISU55_17205 IPR032466 Metal-dependent hydrolase ISU55_17205 IPR003766 Uronate isomerase ISU55_17215 IPR011701 Major facilitator superfamily ISU55_17215 IPR020846 Major facilitator superfamily domain ISU55_17215 IPR036259 MFS transporter superfamily ISU55_17220 IPR036390 Winged helix DNA-binding domain superfamily ISU55_17220 IPR000524 Transcription regulator HTH, GntR ISU55_17220 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_17220 IPR008920 Transcription regulator FadR/GntR, C-terminal ISU55_17220 IPR011711 GntR, C-terminal ISU55_17230 IPR032816 SNARE associated Golgi protein ISU55_17230 IPR032818 DedA family ISU55_17235 IPR026574 Modulator protein MzrA ISU55_17235 IPR027398 SecD export protein N-terminal TM domain ISU55_17245 IPR010279 Inner membrane protein YqjD/ElaB ISU55_17250 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III ISU55_17260 IPR032808 DoxX family ISU55_17270 IPR012337 Ribonuclease H-like superfamily ISU55_17270 IPR006120 Resolvase, HTH domain ISU55_17270 IPR001584 Integrase, catalytic core ISU55_17270 IPR036397 Ribonuclease H superfamily ISU55_17270 IPR017894 HTH domain, IS21 transposase-type ISU55_17275 IPR002611 IstB-like ATP-binding protein ISU55_17275 IPR001270 ClpA/B family ISU55_17275 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_17275 IPR003593 AAA+ ATPase domain ISU55_17275 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17280 IPR020476 NUDIX hydrolase ISU55_17280 IPR000086 NUDIX hydrolase domain ISU55_17280 IPR020084 NUDIX hydrolase, conserved site ISU55_17280 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_17280 IPR003561 Mutator MutT ISU55_17290 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17290 IPR011116 SecA Wing/Scaffold ISU55_17290 IPR011130 SecA, preprotein cross-linking domain ISU55_17290 IPR036266 SecA, Wing/Scaffold superfamily ISU55_17290 IPR036670 SecA, preprotein cross-linking domain superfamily ISU55_17290 IPR014018 SecA motor DEAD ISU55_17290 IPR011115 SecA DEAD-like, N-terminal ISU55_17290 IPR020937 SecA conserved site ISU55_17290 IPR000185 Protein translocase subunit SecA ISU55_17290 IPR004027 SEC-C motif ISU55_17295 IPR009502 Secretion monitor ISU55_17305 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_17305 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase ISU55_17305 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal ISU55_17305 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal ISU55_17310 IPR024757 Cell division protein FtsZ, C-terminal ISU55_17310 IPR020805 Cell division protein FtsZ, conserved site ISU55_17310 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain ISU55_17310 IPR036525 Tubulin/FtsZ, GTPase domain superfamily ISU55_17310 IPR003008 Tubulin/FtsZ, GTPase domain ISU55_17310 IPR000158 Cell division protein FtsZ ISU55_17310 IPR008280 Tubulin/FtsZ, C-terminal ISU55_17315 IPR003494 SHS2 domain inserted in FtsA ISU55_17315 IPR020823 Cell division protein FtsA ISU55_17320 IPR026579 Cell division protein FtsQ ISU55_17320 IPR005548 Cell division protein FtsQ/DivIB ISU55_17320 IPR013685 POTRA domain, FtsQ-type ISU55_17320 IPR034746 POTRA domain ISU55_17325 IPR016185 Pre-ATP-grasp domain superfamily ISU55_17325 IPR011127 D-alanine--D-alanine ligase, N-terminal domain ISU55_17325 IPR011095 D-alanine--D-alanine ligase, C-terminal ISU55_17325 IPR005905 D-alanine--D-alanine ligase ISU55_17325 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site ISU55_17325 IPR013815 ATP-grasp fold, subdomain 1 ISU55_17325 IPR011761 ATP-grasp fold ISU55_17330 IPR036565 Mur-like, catalytic domain superfamily ISU55_17330 IPR005758 UDP-N-acetylmuramate--L-alanine ligase ISU55_17330 IPR036615 Mur ligase, C-terminal domain superfamily ISU55_17330 IPR013221 Mur ligase, central ISU55_17330 IPR000713 Mur ligase, N-terminal catalytic domain ISU55_17330 IPR004101 Mur ligase, C-terminal ISU55_17335 IPR007235 Glycosyl transferase, family 28, C-terminal ISU55_17335 IPR006009 N-acetylglucosaminyltransferase, MurG ISU55_17335 IPR004276 Glycosyltransferase family 28, N-terminal domain ISU55_17340 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ISU55_17340 IPR013437 Probable peptidoglycan glycosyltransferase FtsW ISU55_17340 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ISU55_17345 IPR036565 Mur-like, catalytic domain superfamily ISU55_17345 IPR036615 Mur ligase, C-terminal domain superfamily ISU55_17345 IPR013221 Mur ligase, central ISU55_17345 IPR004101 Mur ligase, C-terminal ISU55_17345 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase ISU55_17350 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site ISU55_17350 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase ISU55_17350 IPR000715 Glycosyl transferase, family 4 ISU55_17355 IPR000713 Mur ligase, N-terminal catalytic domain ISU55_17355 IPR013221 Mur ligase, central ISU55_17355 IPR035911 MurE/MurF, N-terminal ISU55_17355 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase ISU55_17355 IPR004101 Mur ligase, C-terminal ISU55_17355 IPR036565 Mur-like, catalytic domain superfamily ISU55_17355 IPR036615 Mur ligase, C-terminal domain superfamily ISU55_17360 IPR036615 Mur ligase, C-terminal domain superfamily ISU55_17360 IPR013221 Mur ligase, central ISU55_17360 IPR004101 Mur ligase, C-terminal ISU55_17360 IPR035911 MurE/MurF, N-terminal ISU55_17360 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase ISU55_17360 IPR036565 Mur-like, catalytic domain superfamily ISU55_17360 IPR000713 Mur ligase, N-terminal catalytic domain ISU55_17365 IPR037532 Peptidoglycan D,D-transpeptidase FtsI ISU55_17365 IPR005311 Penicillin-binding protein, dimerisation domain ISU55_17365 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ISU55_17365 IPR001460 Penicillin-binding protein, transpeptidase ISU55_17365 IPR012338 Beta-lactamase/transpeptidase-like ISU55_17370 IPR011922 Cell division protein FtsL ISU55_17375 IPR002903 Ribosomal RNA small subunit methyltransferase H ISU55_17375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_17375 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily ISU55_17380 IPR003444 Transcriptional regulator MraZ ISU55_17380 IPR007159 SpoVT-AbrB domain ISU55_17380 IPR038619 MraZ superfamily ISU55_17380 IPR035644 MraZ, C-terminal ISU55_17380 IPR035642 MraZ, N-terminal ISU55_17380 IPR037914 SpoVT-AbrB domain superfamily ISU55_17380 IPR020603 MraZ domain ISU55_17390 IPR010574 L-alanine exporter AlaE ISU55_17395 IPR028082 Periplasmic binding protein-like I ISU55_17395 IPR001761 Periplasmic binding protein/LacI sugar binding domain ISU55_17395 IPR012781 D-fructose-responsive transcription factor ISU55_17395 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_17395 IPR000843 LacI-type HTH domain ISU55_17400 IPR036515 Transposase IS200-like superfamily ISU55_17400 IPR002686 Transposase IS200-like ISU55_17405 IPR002912 ACT domain ISU55_17405 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ISU55_17405 IPR039557 AHAS, ACT domain ISU55_17405 IPR004789 Acetolactate synthase, small subunit ISU55_17405 IPR019455 Acetolactate synthase, small subunit, C-terminal ISU55_17410 IPR029035 DHS-like NAD/FAD-binding domain superfamily ISU55_17410 IPR039368 Acetolactate synthase large subunit, TPP binding domain ISU55_17410 IPR012846 Acetolactate synthase, large subunit, biosynthetic ISU55_17410 IPR012000 Thiamine pyrophosphate enzyme, central domain ISU55_17410 IPR000399 TPP-binding enzyme, conserved site ISU55_17410 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ISU55_17410 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ISU55_17410 IPR029061 Thiamin diphosphate-binding fold ISU55_17415 IPR020845 AMP-binding, conserved site ISU55_17415 IPR042099 AMP-dependent synthetase-like superfamily ISU55_17415 IPR000873 AMP-dependent synthetase/ligase ISU55_17420 IPR036390 Winged helix DNA-binding domain superfamily ISU55_17420 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_17420 IPR000847 Transcription regulator HTH, LysR ISU55_17420 IPR005119 LysR, substrate-binding ISU55_17430 IPR036515 Transposase IS200-like superfamily ISU55_17430 IPR002686 Transposase IS200-like ISU55_17435 IPR013785 Aldolase-type TIM barrel ISU55_17435 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily ISU55_17435 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site ISU55_17435 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain ISU55_17435 IPR000891 Pyruvate carboxyltransferase ISU55_17435 IPR005671 2-isopropylmalate synthase, bacterial-type ISU55_17440 IPR024084 Isopropylmalate dehydrogenase-like domain ISU55_17440 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site ISU55_17440 IPR004429 Isopropylmalate dehydrogenase ISU55_17445 IPR033941 3-Isopropylmalate dehydratase, catalytic domain ISU55_17445 IPR036008 Aconitase, iron-sulfur domain ISU55_17445 IPR018136 Aconitase family, 4Fe-4S cluster binding site ISU55_17445 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain ISU55_17445 IPR004430 3-isopropylmalate dehydratase, large subunit ISU55_17445 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 ISU55_17450 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain ISU55_17450 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ISU55_17450 IPR004431 3-isopropylmalate dehydratase, small subunit ISU55_17450 IPR033940 3-isopropylmalate dehydratase, swivel domain ISU55_17455 IPR004750 Sugar efflux ISU55_17455 IPR020846 Major facilitator superfamily domain ISU55_17455 IPR011701 Major facilitator superfamily ISU55_17455 IPR036259 MFS transporter superfamily ISU55_17460 IPR039424 Solute-binding protein family 5 ISU55_17460 IPR000914 Solute-binding protein family 5 domain ISU55_17460 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain ISU55_17460 IPR023767 Transcriptional regulator SgrR ISU55_17460 IPR036390 Winged helix DNA-binding domain superfamily ISU55_17465 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria ISU55_17465 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter ISU55_17465 IPR006061 Solute-binding family 1, conserved site ISU55_17470 IPR005947 Thiamine ABC transporter, permease protein ISU55_17470 IPR035906 MetI-like superfamily ISU55_17470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_17475 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ ISU55_17475 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17475 IPR017871 ABC transporter, conserved site ISU55_17475 IPR003439 ABC transporter-like ISU55_17475 IPR003593 AAA+ ATPase domain ISU55_17480 IPR032816 SNARE associated Golgi protein ISU55_17480 IPR032818 DedA family ISU55_17485 IPR012337 Ribonuclease H-like superfamily ISU55_17485 IPR006172 DNA-directed DNA polymerase, family B ISU55_17485 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain ISU55_17485 IPR036397 Ribonuclease H superfamily ISU55_17485 IPR042087 DNA polymerase family B, C-terminal domain ISU55_17485 IPR023211 DNA polymerase, palm domain superfamily ISU55_17485 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain ISU55_17485 IPR017964 DNA-directed DNA polymerase, family B, conserved site ISU55_17490 IPR000330 SNF2-related, N-terminal domain ISU55_17490 IPR023949 RNA polymerase-associated protein RapA ISU55_17490 IPR040765 RapA, N-terminal Tudor like domain 1 ISU55_17490 IPR040766 RapA, N-terminal Tudor-like domain 2 ISU55_17490 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17490 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_17490 IPR001650 Helicase, C-terminal ISU55_17490 IPR022737 RNA polymerase recycling, bacterial, C-terminal ISU55_17490 IPR038718 SNF2-like, N-terminal domain superfamily ISU55_17505 IPR006690 Outer membrane protein, OmpA-like, conserved site ISU55_17505 IPR036737 OmpA-like domain superfamily ISU55_17505 IPR008722 Outer membrane porin F, N-terminal ISU55_17505 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ISU55_17505 IPR006664 Outer membrane protein, bacterial ISU55_17505 IPR006665 OmpA-like domain ISU55_17510 IPR010263 Type VI secretion protein, VC_A0114 ISU55_17540 IPR037026 Vgr protein, OB-fold domain superfamily ISU55_17540 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ISU55_17540 IPR010609 Gp5, C-terminal ISU55_17540 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ISU55_17540 IPR006531 Gp5 N-terminal ISU55_17545 IPR036628 Clp, N-terminal domain superfamily ISU55_17545 IPR019489 Clp ATPase, C-terminal ISU55_17545 IPR017729 Type VI secretion system, ATPase ClpV1 ISU55_17545 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17545 IPR041546 ClpA/ClpB, AAA lid domain ISU55_17545 IPR003959 ATPase, AAA-type, core ISU55_17545 IPR004176 Clp, N-terminal ISU55_17545 IPR018368 ClpA/B, conserved site 1 ISU55_17545 IPR001270 ClpA/B family ISU55_17545 IPR003593 AAA+ ATPase domain ISU55_17555 IPR010272 Type VI secretion system, TssF-like ISU55_17570 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU55_17575 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU55_17590 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ISU55_17590 IPR020103 Pseudouridine synthase, catalytic domain superfamily ISU55_17590 IPR006145 Pseudouridine synthase, RsuA/RluA ISU55_17595 IPR001623 DnaJ domain ISU55_17595 IPR023749 Co-chaperone DjlA ISU55_17595 IPR007791 Co-chaperone DjlA, N-terminal ISU55_17595 IPR029024 TerB-like ISU55_17595 IPR036869 Chaperone J-domain superfamily ISU55_17600 IPR005653 Organic solvent tolerance-like, N-terminal ISU55_17600 IPR007543 LptD, C-terminal ISU55_17600 IPR020889 LPS-assembly protein LptD ISU55_17605 IPR015391 SurA N-terminal ISU55_17605 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ISU55_17605 IPR023034 Peptidyl-prolyl isomerase SurA ISU55_17605 IPR027304 Trigger factor/SurA domain superfamily ISU55_17610 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase ISU55_17610 IPR005255 PdxA family ISU55_17615 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal ISU55_17615 IPR011530 Ribosomal RNA adenine dimethylase ISU55_17615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_17615 IPR023165 rRNA adenine dimethylase-like ISU55_17615 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site ISU55_17615 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ISU55_17620 IPR007474 ApaG domain ISU55_17620 IPR036767 ApaG domain superfamily ISU55_17620 IPR023065 Uncharacterised protein family ApaG ISU55_17625 IPR029052 Metallo-dependent phosphatase-like ISU55_17625 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ISU55_17625 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ISU55_17640 IPR036515 Transposase IS200-like superfamily ISU55_17640 IPR002686 Transposase IS200-like ISU55_17645 IPR024072 Dihydrofolate reductase-like domain superfamily ISU55_17645 IPR001796 Dihydrofolate reductase domain ISU55_17645 IPR017925 Dihydrofolate reductase conserved site ISU55_17645 IPR012259 Dihydrofolate reductase ISU55_17650 IPR024528 Threonine/Serine exporter, ThrE ISU55_17650 IPR020914 Uncharacterised protein family UPF0442 ISU55_17655 IPR010619 Putative threonine/serine exporter ISU55_17660 IPR001123 Amino acid exporter protein, LeuE-type ISU55_17660 IPR004778 Homoserine/Threonine efflux protein ISU55_17665 IPR006275 Carbamoyl-phosphate synthase, large subunit ISU55_17665 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily ISU55_17665 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ISU55_17665 IPR016185 Pre-ATP-grasp domain superfamily ISU55_17665 IPR011761 ATP-grasp fold ISU55_17665 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain ISU55_17665 IPR036914 Methylglyoxal synthase-like domain superfamily ISU55_17665 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain ISU55_17665 IPR011607 Methylglyoxal synthase-like domain ISU55_17665 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain ISU55_17670 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain ISU55_17670 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily ISU55_17670 IPR017926 Glutamine amidotransferase ISU55_17670 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain ISU55_17670 IPR029062 Class I glutamine amidotransferase-like ISU55_17670 IPR006274 Carbamoyl-phosphate synthase, small subunit ISU55_17675 IPR022663 Dihydrodipicolinate reductase, C-terminal ISU55_17675 IPR000846 Dihydrodipicolinate reductase, N-terminal ISU55_17675 IPR036291 NAD(P)-binding domain superfamily ISU55_17675 IPR022664 Dihydrodipicolinate reductase, conserved site ISU55_17675 IPR023940 Dihydrodipicolinate reductase ISU55_17680 IPR002686 Transposase IS200-like ISU55_17680 IPR036515 Transposase IS200-like superfamily ISU55_17685 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase ISU55_17690 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ISU55_17695 IPR001872 Peptidase A8, signal peptidase II ISU55_17700 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ISU55_17700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_17700 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ISU55_17700 IPR023585 Isoleucine-tRNA ligase, type 1 ISU55_17700 IPR002301 Isoleucine-tRNA ligase ISU55_17700 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ISU55_17700 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain ISU55_17700 IPR002300 Aminoacyl-tRNA synthetase, class Ia ISU55_17700 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_17700 IPR010663 Zinc finger, FPG/IleRS-type ISU55_17705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_17705 IPR015864 FAD synthetase ISU55_17705 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic ISU55_17705 IPR023468 Riboflavin kinase ISU55_17705 IPR002606 Riboflavin kinase, bacterial ISU55_17705 IPR023465 Riboflavin kinase domain superfamily ISU55_17710 IPR002583 Ribosomal protein S20 ISU55_17710 IPR036510 Ribosomal protein S20 superfamily ISU55_17715 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_17715 IPR000847 Transcription regulator HTH, LysR ISU55_17715 IPR005119 LysR, substrate-binding ISU55_17715 IPR036390 Winged helix DNA-binding domain superfamily ISU55_17720 IPR023171 Na/H antiporter domain superfamily ISU55_17720 IPR004670 Na+/H+ antiporter NhaA ISU55_17725 IPR018253 DnaJ domain, conserved site ISU55_17725 IPR036869 Chaperone J-domain superfamily ISU55_17725 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ISU55_17725 IPR001305 Heat shock protein DnaJ, cysteine-rich domain ISU55_17725 IPR008971 HSP40/DnaJ peptide-binding ISU55_17725 IPR001623 DnaJ domain ISU55_17725 IPR002939 Chaperone DnaJ, C-terminal ISU55_17725 IPR012724 Chaperone DnaJ ISU55_17730 IPR013126 Heat shock protein 70 family ISU55_17730 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily ISU55_17730 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily ISU55_17730 IPR018181 Heat shock protein 70, conserved site ISU55_17730 IPR012725 Chaperone DnaK ISU55_17735 IPR000791 Acetate transporter GPR1/FUN34/SatP family ISU55_17745 IPR011701 Major facilitator superfamily ISU55_17745 IPR020846 Major facilitator superfamily domain ISU55_17745 IPR036259 MFS transporter superfamily ISU55_17745 IPR005829 Sugar transporter, conserved site ISU55_17750 IPR008284 Molybdenum cofactor biosynthesis, conserved site ISU55_17750 IPR001453 MoaB/Mog domain ISU55_17750 IPR036425 MoaB/Mog-like domain superfamily ISU55_17755 IPR013785 Aldolase-type TIM barrel ISU55_17755 IPR001585 Transaldolase/Fructose-6-phosphate aldolase ISU55_17755 IPR004730 Transaldolase type 1 ISU55_17755 IPR018225 Transaldolase, active site ISU55_17765 IPR005583 Peroxide stress protein YaaA ISU55_17770 IPR037158 Threonine synthase, N-terminal domain superfamily ISU55_17770 IPR029144 Threonine synthase, N-terminal ISU55_17770 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_17770 IPR004450 Threonine synthase-like ISU55_17770 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_17770 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site ISU55_17775 IPR000870 Homoserine kinase ISU55_17775 IPR036554 GHMP kinase, C-terminal domain superfamily ISU55_17775 IPR013750 GHMP kinase, C-terminal domain ISU55_17775 IPR006203 GHMP kinase, ATP-binding, conserved site ISU55_17775 IPR006204 GHMP kinase N-terminal domain ISU55_17775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_17775 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_17780 IPR001048 Aspartate/glutamate/uridylate kinase ISU55_17780 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding ISU55_17780 IPR001341 Aspartate kinase ISU55_17780 IPR002912 ACT domain ISU55_17780 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I ISU55_17780 IPR027795 CASTOR, ACT domain ISU55_17780 IPR001342 Homoserine dehydrogenase, catalytic ISU55_17780 IPR036291 NAD(P)-binding domain superfamily ISU55_17780 IPR036393 Acetylglutamate kinase-like superfamily ISU55_17780 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain ISU55_17780 IPR018042 Aspartate kinase, conserved site ISU55_17780 IPR019811 Homoserine dehydrogenase, conserved site ISU55_17785 IPR011720 Thr operon leader peptide ISU55_17790 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_17790 IPR039420 Transcriptional regulatory protein WalR-like ISU55_17790 IPR001789 Signal transduction response regulator, receiver domain ISU55_17790 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_17790 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_17790 IPR011006 CheY-like superfamily ISU55_17795 IPR010292 Uncharacterised protein family CreA ISU55_17800 IPR018062 HTH domain AraC-type, conserved site ISU55_17800 IPR018060 DNA binding HTH domain, AraC-type ISU55_17800 IPR009057 Homeobox-like domain superfamily ISU55_17800 IPR010499 Bacterial transcription activator, effector binding ISU55_17800 IPR029442 GyrI-like small molecule binding domain ISU55_17800 IPR011256 Regulatory factor, effector binding domain superfamily ISU55_17800 IPR020449 Transcription regulator HTH, AraC- type ISU55_17805 IPR023086 Phosphoglycerate mutase, GpmB, probable ISU55_17805 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site ISU55_17805 IPR029033 Histidine phosphatase superfamily ISU55_17805 IPR013078 Histidine phosphatase superfamily, clade-1 ISU55_17810 IPR029001 Inosine triphosphate pyrophosphatase-like ISU55_17810 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 ISU55_17810 IPR002786 Inosine/xanthosine triphosphatase ISU55_17815 IPR013335 Trp repressor, bacterial ISU55_17815 IPR010921 Trp repressor/replication initiator ISU55_17815 IPR000831 Trp repressor ISU55_17815 IPR038116 TrpR-like superfamily ISU55_17820 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily ISU55_17820 IPR012289 Lytic transglycosylase, superhelical linker ISU55_17820 IPR008258 Transglycosylase SLT domain 1 ISU55_17820 IPR000189 Prokaryotic transglycosylase, active site ISU55_17820 IPR008939 Lytic transglycosylase, superhelical U-shaped ISU55_17820 IPR023346 Lysozyme-like domain superfamily ISU55_17825 IPR036412 HAD-like superfamily ISU55_17825 IPR023214 HAD superfamily ISU55_17825 IPR023298 P-type ATPase, transmembrane domain superfamily ISU55_17825 IPR008250 P-type ATPase, A domain superfamily ISU55_17825 IPR001757 P-type ATPase ISU55_17825 IPR023299 P-type ATPase, cytoplasmic domain N ISU55_17825 IPR004014 Cation-transporting P-type ATPase, N-terminal ISU55_17825 IPR006068 Cation-transporting P-type ATPase, C-terminal ISU55_17825 IPR018303 P-type ATPase, phosphorylation site ISU55_17835 IPR029787 Nucleotide cyclase ISU55_17835 IPR003660 HAMP domain ISU55_17835 IPR000160 GGDEF domain ISU55_17835 IPR033417 Periplasmic sensor domain CHASE8 ISU55_17840 IPR006664 Outer membrane protein, bacterial ISU55_17840 IPR036737 OmpA-like domain superfamily ISU55_17840 IPR006665 OmpA-like domain ISU55_17850 IPR032675 Leucine-rich repeat domain superfamily ISU55_17850 IPR003812 Fido domain ISU55_17850 IPR036597 Fido-like domain superfamily ISU55_17850 IPR003591 Leucine-rich repeat, typical subtype ISU55_17855 IPR004821 Cytidyltransferase-like domain ISU55_17855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_17855 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17855 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain ISU55_17855 IPR006417 Nicotinamide-nucleotide adenylyltransferase ISU55_17855 IPR016429 NAD biosynthesis/regulator protein NadR ISU55_17855 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_17855 IPR001387 Cro/C1-type helix-turn-helix domain ISU55_17855 IPR038727 NadR/Ttd14, AAA domain ISU55_17860 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_17860 IPR003593 AAA+ ATPase domain ISU55_17860 IPR004504 DNA repair protein RadA ISU55_17860 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17860 IPR041166 LapB, rubredoxin metal binding domain ISU55_17860 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain ISU55_17860 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_17865 IPR041449 Phosphoserine phosphatase, N-terminal ISU55_17865 IPR023214 HAD superfamily ISU55_17865 IPR036412 HAD-like superfamily ISU55_17865 IPR023190 Phosphoserine phosphatase, domain 2 ISU55_17870 IPR019305 Uncharacterised protein family Smp ISU55_17875 IPR004402 Purine nucleoside phosphorylase DeoD-type ISU55_17875 IPR018016 Nucleoside phosphorylase, conserved site ISU55_17875 IPR000845 Nucleoside phosphorylase domain ISU55_17875 IPR035994 Nucleoside phosphorylase superfamily ISU55_17880 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_17880 IPR010045 Phosphopentomutase ISU55_17880 IPR006124 Metalloenzyme ISU55_17880 IPR024052 Phosphopentomutase DeoB cap domain superfamily ISU55_17890 IPR013785 Aldolase-type TIM barrel ISU55_17890 IPR002915 DeoC/FbaB/ lacD aldolase ISU55_17890 IPR011343 Deoxyribose-phosphate aldolase ISU55_17890 IPR023649 Deoxyribose-phosphate aldolase type II ISU55_17895 IPR002668 Concentrative nucleoside transporter N-terminal domain ISU55_17895 IPR008276 Concentrative nucleoside transporter ISU55_17895 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial ISU55_17895 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ISU55_17895 IPR011657 Concentrative nucleoside transporter C-terminal domain ISU55_17900 IPR032466 Metal-dependent hydrolase ISU55_17900 IPR018228 Deoxyribonuclease, TatD-related, conserved site ISU55_17900 IPR001130 TatD family ISU55_17905 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ISU55_17905 IPR002641 Patatin-like phospholipase domain ISU55_17905 IPR037483 YjjU-like ISU55_17910 IPR009760 Protein of unknown function DUF1328 ISU55_17915 IPR014004 Transport-associated and nodulation domain, bacteria ISU55_17915 IPR007055 BON domain ISU55_17920 IPR005225 Small GTP-binding protein domain ISU55_17920 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_17920 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_17920 IPR004548 Peptide chain release factor 3 ISU55_17920 IPR032090 Peptide chain release factor 3, C-terminal ISU55_17920 IPR041732 Peptide chain release factor 3, GTP-binding domain ISU55_17920 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily ISU55_17920 IPR031157 Tr-type G domain, conserved site ISU55_17920 IPR035647 EF-G domain III/V-like ISU55_17920 IPR000795 Transcription factor, GTP-binding domain ISU55_17920 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_17925 IPR000182 GNAT domain ISU55_17925 IPR016181 Acyl-CoA N-acyltransferase ISU55_17925 IPR006464 N-acetyltransferase RimI/Ard1 ISU55_17930 IPR036654 DNA polymerase III, psi subunit superfamily ISU55_17930 IPR018382 DNA polymerase III, psi subunit, subgroup ISU55_17930 IPR004615 DNA polymerase III, psi subunit ISU55_17935 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_17935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_17935 IPR023543 rRNA small subunit methyltransferase C ISU55_17935 IPR013675 Methyltransferase small, N-terminal ISU55_17935 IPR007848 Methyltransferase small domain ISU55_17945 IPR009885 Protein of unknown function DUF1435 ISU55_17950 IPR029787 Nucleotide cyclase ISU55_17950 IPR000160 GGDEF domain ISU55_17955 IPR000070 Pectinesterase, catalytic ISU55_17955 IPR011050 Pectin lyase fold/virulence factor ISU55_17955 IPR033131 Pectinesterase, Asp active site ISU55_17955 IPR012334 Pectin lyase fold ISU55_17970 IPR001036 Acriflavin resistance protein ISU55_17970 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ISU55_17975 IPR006143 RND efflux pump, membrane fusion protein ISU55_17975 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_17990 IPR002201 Glycosyl transferase, family 9 ISU55_17990 IPR011916 Lipopolysaccharide heptosyltransferase III, putative ISU55_17995 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_17995 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_17995 IPR033676 Autoinducer-2 kinase ISU55_17995 IPR000577 Carbohydrate kinase, FGGY ISU55_18010 IPR003439 ABC transporter-like ISU55_18010 IPR017871 ABC transporter, conserved site ISU55_18010 IPR003593 AAA+ ATPase domain ISU55_18010 IPR030281 Autoinducer 2 import ATP-binding protein LsrA ISU55_18010 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18015 IPR001851 ABC transporter, permease ISU55_18020 IPR001851 ABC transporter, permease ISU55_18025 IPR025997 Periplasmic binding protein ISU55_18025 IPR028082 Periplasmic binding protein-like I ISU55_18025 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB ISU55_18030 IPR013785 Aldolase-type TIM barrel ISU55_18030 IPR041720 Aldolase FbaB-like, archaeal-type ISU55_18030 IPR002915 DeoC/FbaB/ lacD aldolase ISU55_18030 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase ISU55_18035 IPR007138 Antibiotic biosynthesis monooxygenase domain ISU55_18035 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase ISU55_18035 IPR011008 Dimeric alpha-beta barrel ISU55_18040 IPR019637 Protein of unknown function DUF2501 ISU55_18045 IPR008731 Phosphotransferase system, enzyme I N-terminal ISU55_18045 IPR000032 Phosphocarrier protein HPr-like ISU55_18045 IPR008279 PEP-utilising enzyme, mobile domain ISU55_18045 IPR018274 PEP-utilising enzyme, active site ISU55_18045 IPR000121 PEP-utilising enzyme, C-terminal ISU55_18045 IPR023151 PEP-utilising enzyme, conserved site ISU55_18045 IPR036637 Phosphohistidine domain superfamily ISU55_18045 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_18045 IPR016152 Phosphotransferase/anion transporter ISU55_18045 IPR040442 Pyruvate kinase-like domain superfamily ISU55_18045 IPR035895 HPr-like superfamily ISU55_18045 IPR006318 Phosphotransferase system, enzyme I-like ISU55_18045 IPR036618 PtsI, HPr-binding domain superfamily ISU55_18045 IPR002178 PTS EIIA type-2 domain ISU55_18045 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ISU55_18050 IPR013014 Phosphotransferase system, EIIC component, type 2 ISU55_18050 IPR006327 Phosphotransferase system, fructose IIC component ISU55_18055 IPR013011 Phosphotransferase system, EIIB component, type 2 ISU55_18055 IPR036095 PTS system IIB component-like superfamily ISU55_18055 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ISU55_18055 IPR003353 Phosphotransferase system, fructose-specific IIB subunit ISU55_18060 IPR003353 Phosphotransferase system, fructose-specific IIB subunit ISU55_18060 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ISU55_18060 IPR013011 Phosphotransferase system, EIIB component, type 2 ISU55_18060 IPR036095 PTS system IIB component-like superfamily ISU55_18065 IPR009057 Homeobox-like domain superfamily ISU55_18065 IPR018060 DNA binding HTH domain, AraC-type ISU55_18065 IPR020449 Transcription regulator HTH, AraC- type ISU55_18065 IPR018062 HTH domain AraC-type, conserved site ISU55_18075 IPR010295 Protein of unknown function DUF898 ISU55_18115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_18115 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site ISU55_18115 IPR002941 DNA methylase N-4/N-6 ISU55_18130 IPR003593 AAA+ ATPase domain ISU55_18130 IPR011704 ATPase, dynein-related, AAA domain ISU55_18130 IPR021961 Protein of unknown function DUF3578 ISU55_18130 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18135 IPR017894 HTH domain, IS21 transposase-type ISU55_18135 IPR036397 Ribonuclease H superfamily ISU55_18135 IPR012337 Ribonuclease H-like superfamily ISU55_18135 IPR006120 Resolvase, HTH domain ISU55_18135 IPR001584 Integrase, catalytic core ISU55_18140 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18140 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_18140 IPR001270 ClpA/B family ISU55_18140 IPR003593 AAA+ ATPase domain ISU55_18140 IPR002611 IstB-like ATP-binding protein ISU55_18145 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ISU55_18145 IPR003732 D-aminoacyl-tRNA deacylase DTD ISU55_18150 IPR023679 Uncharacterised protein family UPF0761, bacterial ISU55_18150 IPR017039 Virulence factor BrkB ISU55_18155 IPR006439 HAD hydrolase, subfamily IA ISU55_18155 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ISU55_18155 IPR023214 HAD superfamily ISU55_18155 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_18155 IPR036412 HAD-like superfamily ISU55_18160 IPR031157 Tr-type G domain, conserved site ISU55_18160 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_18160 IPR000640 Elongation factor EFG, domain V-like ISU55_18160 IPR000795 Transcription factor, GTP-binding domain ISU55_18160 IPR005225 Small GTP-binding protein domain ISU55_18160 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_18160 IPR042116 GTP-binding protein TypA/BipA, C-terminal ISU55_18160 IPR006298 GTP-binding protein TypA ISU55_18160 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18160 IPR035647 EF-G domain III/V-like ISU55_18160 IPR035651 BipA, domain V ISU55_18165 IPR004809 Glutamine synthetase type I ISU55_18165 IPR008146 Glutamine synthetase, catalytic domain ISU55_18165 IPR027303 Glutamine synthetase, glycine-rich site ISU55_18165 IPR036651 Glutamine synthetase, N-terminal domain superfamily ISU55_18165 IPR027302 Glutamine synthetase, N-terminal conserved site ISU55_18165 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain ISU55_18165 IPR008147 Glutamine synthetase, beta-Grasp domain ISU55_18165 IPR001637 Glutamine synthetase class-I, adenylation site ISU55_18170 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_18170 IPR013767 PAS fold ISU55_18170 IPR035965 PAS domain superfamily ISU55_18170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_18170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_18170 IPR000014 PAS domain ISU55_18170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_18170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_18170 IPR005467 Histidine kinase domain ISU55_18175 IPR001789 Signal transduction response regulator, receiver domain ISU55_18175 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18175 IPR003593 AAA+ ATPase domain ISU55_18175 IPR002078 RNA polymerase sigma factor 54 interaction domain ISU55_18175 IPR010114 DNA-binding transcriptional regulator NtrC ISU55_18175 IPR009057 Homeobox-like domain superfamily ISU55_18175 IPR025944 Sigma-54 interaction domain, conserved site ISU55_18175 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ISU55_18175 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ISU55_18175 IPR011006 CheY-like superfamily ISU55_18175 IPR002197 DNA binding HTH domain, Fis-type ISU55_18180 IPR034505 Anaerobic coproporphyrinogen-III oxidase ISU55_18180 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN ISU55_18180 IPR006638 Elp3/MiaB/NifB ISU55_18180 IPR010723 HemN, C-terminal ISU55_18180 IPR007197 Radical SAM ISU55_18180 IPR023404 Radical SAM, alpha/beta horseshoe ISU55_18185 IPR007336 Der GTPase activator ISU55_18190 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18190 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC ISU55_18190 IPR006073 GTP binding domain ISU55_18190 IPR030393 EngB-type guanine nucleotide-binding (G) domain ISU55_18195 IPR036515 Transposase IS200-like superfamily ISU55_18195 IPR002686 Transposase IS200-like ISU55_18200 IPR002686 Transposase IS200-like ISU55_18200 IPR036515 Transposase IS200-like superfamily ISU55_18205 IPR036397 Ribonuclease H superfamily ISU55_18205 IPR002562 3'-5' exonuclease domain ISU55_18205 IPR002421 5'-3' exonuclease, N-terminal ISU55_18205 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal ISU55_18205 IPR029060 PIN-like domain superfamily ISU55_18205 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ISU55_18205 IPR019760 DNA-directed DNA polymerase, family A, conserved site ISU55_18205 IPR001098 DNA-directed DNA polymerase, family A, palm domain ISU55_18205 IPR008918 Helix-hairpin-helix motif, class 2 ISU55_18205 IPR002298 DNA polymerase A ISU55_18205 IPR018320 DNA polymerase 1 ISU55_18205 IPR020045 DNA polymerase I-like, H3TH domain ISU55_18205 IPR012337 Ribonuclease H-like superfamily ISU55_18210 IPR013766 Thioredoxin domain ISU55_18210 IPR017937 Thioredoxin, conserved site ISU55_18210 IPR036249 Thioredoxin-like superfamily ISU55_18210 IPR001853 DSBA-like thioredoxin domain ISU55_18210 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL ISU55_18215 IPR002575 Aminoglycoside phosphotransferase ISU55_18215 IPR011009 Protein kinase-like domain superfamily ISU55_18215 IPR032882 SrkA/RdoA protein kinase ISU55_18220 IPR038134 YihD-like superfamily ISU55_18220 IPR009383 Protein of unknown function DUF1040 ISU55_18225 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_18225 IPR013482 Molybdenum cofactor guanylyltransferase ISU55_18225 IPR025877 MobA-like NTP transferase ISU55_18230 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain ISU55_18230 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18235 IPR001207 Transposase, mutator type ISU55_18260 IPR033134 Asp/Glu racemase, active site 2 ISU55_18260 IPR004391 Glutamate racemase ISU55_18260 IPR015942 Asp/Glu/hydantoin racemase ISU55_18260 IPR001920 Asp/Glu racemase ISU55_18260 IPR018187 Asp/Glu racemase, active site 1 ISU55_18265 IPR012910 TonB-dependent receptor, plug domain ISU55_18265 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_18265 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_18265 IPR010917 TonB-dependent receptor, conserved site ISU55_18265 IPR039426 Vitamin B12 transporter BtuB-like ISU55_18265 IPR010101 TonB-dependent vitamin B12 transporter BtuB ISU55_18265 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_18270 IPR030390 RNA methyltransferase TrmA, active site ISU55_18270 IPR030391 RNA methyltransferase TrmA, conserved site ISU55_18270 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA ISU55_18270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_18270 IPR010280 (Uracil-5)-methyltransferase family ISU55_18275 IPR009867 Protein of unknown function DUF1422 ISU55_18280 IPR001647 DNA-binding HTH domain, TetR-type ISU55_18280 IPR009057 Homeobox-like domain superfamily ISU55_18280 IPR023764 Transcriptional repressor HTH, FabR ISU55_18285 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ISU55_18285 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ISU55_18285 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_18285 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU55_18285 IPR023753 FAD/NAD(P)-binding domain ISU55_18285 IPR022962 Soluble pyridine nucleotide transhydrogenase ISU55_18290 IPR036390 Winged helix DNA-binding domain superfamily ISU55_18290 IPR005119 LysR, substrate-binding ISU55_18290 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_18290 IPR000847 Transcription regulator HTH, LysR ISU55_18295 IPR036249 Thioredoxin-like superfamily ISU55_18295 IPR011906 Glutaredoxin domain ISU55_18295 IPR002109 Glutaredoxin ISU55_18295 IPR014025 Glutaredoxin subgroup ISU55_18295 IPR037944 Peroxiredoxin-5-like ISU55_18295 IPR013740 Redoxin ISU55_18295 IPR011767 Glutaredoxin active site ISU55_18300 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ISU55_18300 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ISU55_18300 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU55_18300 IPR006258 Dihydrolipoamide dehydrogenase ISU55_18300 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_18300 IPR023753 FAD/NAD(P)-binding domain ISU55_18300 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ISU55_18305 IPR037682 TonB, C-terminal ISU55_18305 IPR006260 TonB/TolA, C-terminal ISU55_18310 IPR006144 Secretion protein HlyD, conserved site ISU55_18310 IPR010129 Type I secretion membrane fusion protein, HlyD family ISU55_18315 IPR003593 AAA+ ATPase domain ISU55_18315 IPR011527 ABC transporter type 1, transmembrane domain ISU55_18315 IPR010128 ATPase, type I secretion system, PrtD ISU55_18315 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_18315 IPR003439 ABC transporter-like ISU55_18315 IPR017871 ABC transporter, conserved site ISU55_18315 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18325 IPR011276 TonB-dependent haem/haemoglobin receptor ISU55_18325 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ISU55_18325 IPR039426 Vitamin B12 transporter BtuB-like ISU55_18325 IPR012910 TonB-dependent receptor, plug domain ISU55_18325 IPR037066 TonB-dependent receptor, plug domain superfamily ISU55_18325 IPR000531 TonB-dependent receptor-like, beta-barrel ISU55_18325 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor ISU55_18330 IPR009049 Argininosuccinate lyase ISU55_18330 IPR029419 Argininosuccinate lyase, C-terminal ISU55_18330 IPR024083 Fumarase/histidase, N-terminal ISU55_18330 IPR020557 Fumarate lyase, conserved site ISU55_18330 IPR000362 Fumarate lyase family ISU55_18330 IPR022761 Fumarate lyase, N-terminal ISU55_18330 IPR008948 L-Aspartase-like ISU55_18335 IPR036393 Acetylglutamate kinase-like superfamily ISU55_18335 IPR004662 Acetylglutamate kinase family ISU55_18335 IPR037528 Acetylglutamate kinase ArgB ISU55_18335 IPR001048 Aspartate/glutamate/uridylate kinase ISU55_18335 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic ISU55_18340 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 ISU55_18340 IPR012280 Semialdehyde dehydrogenase, dimerisation domain ISU55_18340 IPR000534 Semialdehyde dehydrogenase, NAD-binding ISU55_18340 IPR036291 NAD(P)-binding domain superfamily ISU55_18340 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site ISU55_18345 IPR010169 Acetylornithine deacetylase ArgE ISU55_18345 IPR036264 Bacterial exopeptidase dimerisation domain ISU55_18345 IPR002933 Peptidase M20 ISU55_18345 IPR011650 Peptidase M20, dimerisation domain ISU55_18345 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ISU55_18350 IPR021135 Phosphoenolpyruvate carboxylase ISU55_18350 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site ISU55_18350 IPR033129 Phosphoenolpyruvate carboxylase, His active site ISU55_18350 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_18350 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type ISU55_18375 IPR006076 FAD dependent oxidoreductase ISU55_18375 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_18375 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase ISU55_18375 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily ISU55_18375 IPR031656 Alpha-glycerophosphate oxidase, C-terminal ISU55_18380 IPR035090 Phosphorylase pyridoxal-phosphate attachment site ISU55_18380 IPR000811 Glycosyl transferase, family 35 ISU55_18380 IPR011833 Glycogen/starch/alpha-glucan phosphorylase ISU55_18385 IPR013534 Starch synthase, catalytic domain ISU55_18385 IPR011835 Bacterial/plant glycogen synthase ISU55_18385 IPR001296 Glycosyl transferase, family 1 ISU55_18390 IPR011004 Trimeric LpxA-like superfamily ISU55_18390 IPR005836 ADP-glucose pyrophosphorylase, conserved site ISU55_18390 IPR005835 Nucleotidyl transferase domain ISU55_18390 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial ISU55_18390 IPR011831 Glucose-1-phosphate adenylyltransferase ISU55_18390 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_18395 IPR017853 Glycoside hydrolase superfamily ISU55_18395 IPR013783 Immunoglobulin-like fold ISU55_18395 IPR014756 Immunoglobulin E-set ISU55_18395 IPR022844 Glycogen debranching enzyme, bacterial ISU55_18395 IPR013780 Glycosyl hydrolase, all-beta ISU55_18395 IPR004193 Glycoside hydrolase, family 13, N-terminal ISU55_18395 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ISU55_18395 IPR040784 Glycogen debranching enzyme, C-terminal domain ISU55_18395 IPR011837 Glycogen debranching enzyme, GlgX type ISU55_18400 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ISU55_18400 IPR037439 1,4-alpha-glucan-branching enzyme ISU55_18400 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB ISU55_18400 IPR004193 Glycoside hydrolase, family 13, N-terminal ISU55_18400 IPR013780 Glycosyl hydrolase, all-beta ISU55_18400 IPR017853 Glycoside hydrolase superfamily ISU55_18400 IPR013783 Immunoglobulin-like fold ISU55_18400 IPR014756 Immunoglobulin E-set ISU55_18400 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta ISU55_18405 IPR010559 Signal transduction histidine kinase, internal region ISU55_18405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_18405 IPR003018 GAF domain ISU55_18405 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region ISU55_18410 IPR024519 Inverse autotransporter, beta-domain ISU55_18410 IPR016187 C-type lectin fold ISU55_18410 IPR008964 Invasin/intimin cell-adhesion fragments ISU55_18410 IPR016186 C-type lectin-like/link domain superfamily ISU55_18410 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ISU55_18410 IPR038177 Inverse autotransporter, beta-domain superfamily ISU55_18410 IPR013783 Immunoglobulin-like fold ISU55_18410 IPR003535 Intimin/invasin bacterial adhesion mediator protein ISU55_18410 IPR013117 Intimin, C-terminal ISU55_18410 IPR015217 Invasin, domain 3 ISU55_18440 IPR012080 Aspartate-semialdehyde dehydrogenase ISU55_18440 IPR000534 Semialdehyde dehydrogenase, NAD-binding ISU55_18440 IPR012280 Semialdehyde dehydrogenase, dimerisation domain ISU55_18440 IPR036291 NAD(P)-binding domain superfamily ISU55_18440 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type ISU55_18440 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site ISU55_18445 IPR002771 Multiple antibiotic resistance (MarC)-related ISU55_18460 IPR031322 Shikimate kinase/gluconokinase ISU55_18460 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18460 IPR006001 Carbohydrate kinase, thermoresistant glucokinase ISU55_18465 IPR003474 Gluconate transporter ISU55_18470 IPR028082 Periplasmic binding protein-like I ISU55_18470 IPR001761 Periplasmic binding protein/LacI sugar binding domain ISU55_18470 IPR000843 LacI-type HTH domain ISU55_18470 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_18475 IPR011051 RmlC-like cupin domain superfamily ISU55_18475 IPR014710 RmlC-like jelly roll fold ISU55_18475 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain ISU55_18475 IPR003829 Pirin, N-terminal domain ISU55_18475 IPR012093 Pirin ISU55_18485 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_18485 IPR001789 Signal transduction response regulator, receiver domain ISU55_18485 IPR039420 Transcriptional regulatory protein WalR-like ISU55_18485 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_18485 IPR011006 CheY-like superfamily ISU55_18485 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_18495 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 ISU55_18495 IPR000771 Fructose-bisphosphate aldolase, class-II ISU55_18495 IPR013785 Aldolase-type TIM barrel ISU55_18505 IPR025997 Periplasmic binding protein ISU55_18505 IPR028082 Periplasmic binding protein-like I ISU55_18510 IPR001851 ABC transporter, permease ISU55_18515 IPR003593 AAA+ ATPase domain ISU55_18515 IPR003439 ABC transporter-like ISU55_18515 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18515 IPR015861 ABC transporter, ribose import, RbsA ISU55_18515 IPR017871 ABC transporter, conserved site ISU55_18520 IPR005467 Histidine kinase domain ISU55_18520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_18520 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_18520 IPR000014 PAS domain ISU55_18520 IPR035965 PAS domain superfamily ISU55_18520 IPR013656 PAS fold-4 ISU55_18520 IPR011006 CheY-like superfamily ISU55_18520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_18520 IPR001789 Signal transduction response regulator, receiver domain ISU55_18520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_18520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_18525 IPR023166 HI0933-like insert domain superfamily ISU55_18525 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_18525 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like ISU55_18530 IPR001204 Phosphate transporter ISU55_18535 IPR002686 Transposase IS200-like ISU55_18535 IPR036515 Transposase IS200-like superfamily ISU55_18540 IPR019598 Universal stress protein B ISU55_18545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_18545 IPR006015 Universal stress protein A family ISU55_18545 IPR006016 UspA ISU55_18550 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ISU55_18550 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ISU55_18550 IPR033524 Leu/Phe/Val dehydrogenases active site ISU55_18550 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ISU55_18550 IPR014362 Glutamate dehydrogenase ISU55_18550 IPR036291 NAD(P)-binding domain superfamily ISU55_18550 IPR033922 NAD(P) binding domain of glutamate dehydrogenase ISU55_18555 IPR001343 RTX calcium-binding nonapeptide repeat ISU55_18555 IPR001818 Peptidase M10, metallopeptidase ISU55_18555 IPR016294 Peptidase M10B ISU55_18555 IPR013858 Peptidase M10 serralysin, C-terminal ISU55_18555 IPR006026 Peptidase, metallopeptidase ISU55_18555 IPR034033 Serralysin-like metallopeptidase domain ISU55_18555 IPR018511 Hemolysin-type calcium-binding conserved site ISU55_18555 IPR024079 Metallopeptidase, catalytic domain superfamily ISU55_18555 IPR011049 Serralysin-like metalloprotease, C-terminal ISU55_18560 IPR007536 Ribosomal RNA small subunit methyltransferase J ISU55_18560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_18565 IPR001567 Peptidase M3A/M3B catalytic domain ISU55_18565 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ISU55_18570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_18570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_18570 IPR007473 Ribosomal RNA large subunit methyltransferase J ISU55_18575 IPR023753 FAD/NAD(P)-binding domain ISU55_18575 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_18575 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ISU55_18575 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU55_18575 IPR006322 Glutathione reductase, eukaryote/bacterial ISU55_18575 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ISU55_18575 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ISU55_18580 IPR041522 CdaR, GGDEF-like domain ISU55_18580 IPR008599 Putative sugar diacid recognition ISU55_18580 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ISU55_18580 IPR025736 PucR C-terminal helix-turn-helix domain ISU55_18590 IPR003474 Gluconate transporter ISU55_18595 IPR018193 Glycerate kinase, flavodoxin-like fold ISU55_18595 IPR018197 Glycerate kinase, restriction-enzyme-like fold ISU55_18595 IPR036129 Glycerate kinase superfamily ISU55_18595 IPR004381 Glycerate kinase ISU55_18620 IPR005274 Inner membrane protein YhjD ISU55_18620 IPR017039 Virulence factor BrkB ISU55_18625 IPR036265 HIT-like superfamily ISU55_18625 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily ISU55_18625 IPR003763 CDP-diacylglycerol pyrophosphatase ISU55_18630 IPR007844 AsmA ISU55_18635 IPR001633 EAL domain ISU55_18635 IPR035919 EAL domain superfamily ISU55_18640 IPR014347 Tautomerase/MIF superfamily ISU55_18640 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type ISU55_18640 IPR004370 4-oxalocrotonate tautomerase ISU55_18645 IPR029056 Ribokinase-like ISU55_18645 IPR011611 Carbohydrate kinase PfkB ISU55_18645 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_18650 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ISU55_18650 IPR011765 Peptidase M16, N-terminal ISU55_18650 IPR007863 Peptidase M16, C-terminal ISU55_18655 IPR023954 C4-dicarboxylate transport protein ISU55_18655 IPR001991 Sodium:dicarboxylate symporter ISU55_18655 IPR036458 Sodium:dicarboxylate symporter superfamily ISU55_18655 IPR018107 Sodium:dicarboxylate symporter, conserved site ISU55_18665 IPR010702 Periplasmic pectate lyase ISU55_18670 IPR009331 Oligogalacturonate-specific porin ISU55_18675 IPR000160 GGDEF domain ISU55_18675 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 ISU55_18675 IPR035919 EAL domain superfamily ISU55_18675 IPR003660 HAMP domain ISU55_18675 IPR029787 Nucleotide cyclase ISU55_18675 IPR001633 EAL domain ISU55_18680 IPR002037 Glycoside hydrolase, family 8 ISU55_18680 IPR019834 Glycoside hydrolase, family 8, conserved site ISU55_18680 IPR008928 Six-hairpin glycosidase superfamily ISU55_18680 IPR012341 Six-hairpin glycosidase-like superfamily ISU55_18685 IPR003593 AAA+ ATPase domain ISU55_18685 IPR003439 ABC transporter-like ISU55_18685 IPR017871 ABC transporter, conserved site ISU55_18685 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_18685 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18690 IPR003439 ABC transporter-like ISU55_18690 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18690 IPR017871 ABC transporter, conserved site ISU55_18690 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ISU55_18690 IPR003593 AAA+ ATPase domain ISU55_18695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_18695 IPR035906 MetI-like superfamily ISU55_18695 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ISU55_18700 IPR035906 MetI-like superfamily ISU55_18700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_18705 IPR039424 Solute-binding protein family 5 ISU55_18705 IPR030678 Peptide/nickel binding protein, MppA-type ISU55_18705 IPR000914 Solute-binding protein family 5 domain ISU55_18705 IPR023765 Solute-binding protein family 5, conserved site ISU55_18710 IPR034746 POTRA domain ISU55_18710 IPR013686 Polypeptide-transport-associated, ShlB-type ISU55_18710 IPR005565 Haemolysin activator HlyB, C-terminal ISU55_18710 IPR035251 ShlB, POTRA domain ISU55_18710 IPR027282 Two partner secretion pathway transporter ISU55_18715 IPR012334 Pectin lyase fold ISU55_18715 IPR008619 Filamentous haemagglutinin repeat ISU55_18715 IPR006914 VENN motif-containing domain ISU55_18715 IPR011050 Pectin lyase fold/virulence factor ISU55_18715 IPR008638 Filamentous haemagglutinin, N-terminal ISU55_18715 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat ISU55_18715 IPR006626 Parallel beta-helix repeat ISU55_18715 IPR025157 Hemagglutinin repeat ISU55_18725 IPR011701 Major facilitator superfamily ISU55_18725 IPR000849 Sugar phosphate transporter ISU55_18725 IPR021159 Glycerate/sugar phosphate transporter, conserved site ISU55_18725 IPR036259 MFS transporter superfamily ISU55_18725 IPR020846 Major facilitator superfamily domain ISU55_18730 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_18730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_18730 IPR005467 Histidine kinase domain ISU55_18730 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ISU55_18730 IPR007895 MASE1 ISU55_18735 IPR002611 IstB-like ATP-binding protein ISU55_18735 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18735 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_18735 IPR001270 ClpA/B family ISU55_18735 IPR003593 AAA+ ATPase domain ISU55_18740 IPR036397 Ribonuclease H superfamily ISU55_18740 IPR012337 Ribonuclease H-like superfamily ISU55_18740 IPR001584 Integrase, catalytic core ISU55_18740 IPR017894 HTH domain, IS21 transposase-type ISU55_18740 IPR006120 Resolvase, HTH domain ISU55_18745 IPR012660 Thioesterase, putative ISU55_18745 IPR029069 HotDog domain superfamily ISU55_18745 IPR016181 Acyl-CoA N-acyltransferase ISU55_18745 IPR000182 GNAT domain ISU55_18750 IPR007844 AsmA ISU55_18755 IPR006043 Xanthine/uracil/vitamin C permease ISU55_18755 IPR006042 Xanthine/uracil permease ISU55_18760 IPR004445 Sodium/glutamate symport carrier protein GltS ISU55_18770 IPR004609 ATP-dependent DNA helicase RecG ISU55_18770 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18770 IPR033454 RecG, wedge domain ISU55_18770 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_18770 IPR012340 Nucleic acid-binding, OB-fold ISU55_18770 IPR011545 DEAD/DEAH box helicase domain ISU55_18770 IPR001650 Helicase, C-terminal ISU55_18775 IPR029028 Alpha/beta knot methyltransferases ISU55_18775 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal ISU55_18775 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase ISU55_18775 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_18775 IPR001537 tRNA/rRNA methyltransferase, SpoU type ISU55_18780 IPR033655 RelA, TGS domain ISU55_18780 IPR012676 TGS-like ISU55_18780 IPR012675 Beta-grasp domain superfamily ISU55_18780 IPR003607 HD/PDEase domain ISU55_18780 IPR002912 ACT domain ISU55_18780 IPR007685 RelA/SpoT ISU55_18780 IPR004811 RelA/SpoT family ISU55_18780 IPR004095 TGS ISU55_18785 IPR036161 RPB6/omega subunit-like superfamily ISU55_18785 IPR012293 RNA polymerase subunit, RPB6/omega ISU55_18785 IPR006110 RNA polymerase, subunit omega/K/RPB6 ISU55_18785 IPR003716 DNA-directed RNA polymerase, omega subunit ISU55_18790 IPR017665 Guanylate kinase ISU55_18790 IPR008144 Guanylate kinase-like domain ISU55_18790 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ISU55_18790 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_18790 IPR020590 Guanylate kinase, conserved site ISU55_18795 IPR010994 RuvA domain 2-like ISU55_18795 IPR013840 NAD-dependent DNA ligase, N-terminal ISU55_18795 IPR020923 DNA ligase B ISU55_18795 IPR012340 Nucleic acid-binding, OB-fold ISU55_18795 IPR004150 NAD-dependent DNA ligase, OB-fold ISU55_18795 IPR013839 NAD-dependent DNA ligase, adenylation ISU55_18800 IPR005115 Uncharacterised domain UPF0126 ISU55_18805 IPR013551 Domain of unknown function DUF1732 ISU55_18805 IPR013527 YicC-like, N-terminal ISU55_18805 IPR005229 Conserved hypothetical protein CHP00255 ISU55_18810 IPR018336 Ribonuclease PH, conserved site ISU55_18810 IPR002381 Ribonuclease PH, bacterial-type ISU55_18810 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_18810 IPR027408 PNPase/RNase PH domain superfamily ISU55_18810 IPR036345 Exoribonuclease, PH domain 2 superfamily ISU55_18810 IPR015847 Exoribonuclease, phosphorolytic domain 2 ISU55_18810 IPR001247 Exoribonuclease, phosphorolytic domain 1 ISU55_18815 IPR004467 Orotate phosphoribosyl transferase domain ISU55_18815 IPR000836 Phosphoribosyltransferase domain ISU55_18815 IPR029057 Phosphoribosyltransferase-like ISU55_18815 IPR023031 Orotate phosphoribosyltransferase ISU55_18820 IPR023769 Nucleoid occlusion factor SlmA ISU55_18820 IPR009057 Homeobox-like domain superfamily ISU55_18820 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ISU55_18820 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ISU55_18820 IPR001647 DNA-binding HTH domain, TetR-type ISU55_18825 IPR033704 dUTPase, trimeric ISU55_18825 IPR029054 dUTPase-like ISU55_18825 IPR036157 dUTPase-like superfamily ISU55_18825 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase ISU55_18830 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal ISU55_18830 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC ISU55_18830 IPR035929 CoaB-like superfamily ISU55_18830 IPR003382 Flavoprotein ISU55_18830 IPR036551 Flavin prenyltransferase-like ISU55_18835 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily ISU55_18835 IPR037518 MPN domain ISU55_18835 IPR025657 RadC-like JAB domain ISU55_18835 IPR010994 RuvA domain 2-like ISU55_18835 IPR020891 Uncharacterised protein family UPF0758, conserved site ISU55_18835 IPR001405 Uncharacterised protein family UPF0758 ISU55_18840 IPR001383 Ribosomal protein L28 ISU55_18840 IPR037147 Ribosomal protein L28/L24 superfamily ISU55_18840 IPR026569 Ribosomal protein L28/L24 ISU55_18840 IPR034704 L28p-like ISU55_18845 IPR018264 Ribosomal protein L33, conserved site ISU55_18845 IPR001705 Ribosomal protein L33 ISU55_18845 IPR038584 Ribosomal protein L33 superfamily ISU55_18845 IPR011332 Zinc-binding ribosomal protein ISU55_18850 IPR010979 Ribosomal protein S13-like, H2TH ISU55_18850 IPR020629 Formamidopyrimidine-DNA glycosylase ISU55_18850 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain ISU55_18850 IPR010663 Zinc finger, FPG/IleRS-type ISU55_18850 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site ISU55_18850 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding ISU55_18850 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type ISU55_18850 IPR035937 MutM-like, N-terminal ISU55_18855 IPR004821 Cytidyltransferase-like domain ISU55_18855 IPR001980 Phosphopantetheine adenylyltransferase ISU55_18855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_18860 IPR001173 Glycosyltransferase 2-like ISU55_18860 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_18865 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily ISU55_18865 IPR039901 3-deoxy-D-manno-octulosonic acid transferase ISU55_18865 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal ISU55_18870 IPR002201 Glycosyl transferase, family 9 ISU55_18870 IPR011908 Lipopolysaccharide heptosyltransferase I ISU55_18875 IPR002201 Glycosyl transferase, family 9 ISU55_18875 IPR011910 ADP-heptose--LPS heptosyltransferase 2 ISU55_18880 IPR001509 NAD-dependent epimerase/dehydratase ISU55_18880 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase ISU55_18880 IPR036291 NAD(P)-binding domain superfamily ISU55_18885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_18885 IPR004839 Aminotransferase, class I/classII ISU55_18885 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase ISU55_18885 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_18885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_18885 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ISU55_18890 IPR013154 Alcohol dehydrogenase, N-terminal ISU55_18890 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ISU55_18890 IPR004627 L-threonine 3-dehydrogenase ISU55_18890 IPR036291 NAD(P)-binding domain superfamily ISU55_18890 IPR020843 Polyketide synthase, enoylreductase domain ISU55_18890 IPR011032 GroES-like superfamily ISU55_18890 IPR013149 Alcohol dehydrogenase, C-terminal ISU55_18900 IPR011055 Duplicated hybrid motif ISU55_18900 IPR016047 Peptidase M23 ISU55_18905 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent ISU55_18905 IPR006124 Metalloenzyme ISU55_18905 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily ISU55_18905 IPR011258 BPG-independent PGAM, N-terminal ISU55_18905 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_18910 IPR001763 Rhodanese-like domain ISU55_18910 IPR036873 Rhodanese-like domain superfamily ISU55_18915 IPR002109 Glutaredoxin ISU55_18915 IPR011767 Glutaredoxin active site ISU55_18915 IPR036249 Thioredoxin-like superfamily ISU55_18915 IPR011900 Glutaredoxin, GrxC ISU55_18915 IPR014025 Glutaredoxin subgroup ISU55_18920 IPR003708 Bacterial protein export chaperone SecB ISU55_18920 IPR035958 SecB-like superfamily ISU55_18925 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ISU55_18925 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent ISU55_18925 IPR036291 NAD(P)-binding domain superfamily ISU55_18925 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal ISU55_18925 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal ISU55_18925 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ISU55_18930 IPR011004 Trimeric LpxA-like superfamily ISU55_18930 IPR005881 Serine O-acetyltransferase ISU55_18930 IPR042122 Serine acetyltransferase, N-terminal domain superfamily ISU55_18930 IPR010493 Serine acetyltransferase, N-terminal ISU55_18930 IPR018357 Hexapeptide transferase, conserved site ISU55_18930 IPR001451 Hexapeptide repeat ISU55_18935 IPR001537 tRNA/rRNA methyltransferase, SpoU type ISU55_18935 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ISU55_18935 IPR029028 Alpha/beta knot methyltransferases ISU55_18935 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase ISU55_18940 IPR009057 Homeobox-like domain superfamily ISU55_18940 IPR018060 DNA binding HTH domain, AraC-type ISU55_18940 IPR018062 HTH domain AraC-type, conserved site ISU55_18940 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site ISU55_18940 IPR016221 Bifunctional regulatory protein Ada ISU55_18940 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ISU55_18940 IPR035451 Ada-like domain superfamily ISU55_18940 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain ISU55_18940 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ISU55_18940 IPR004026 Ada DNA repair, metal-binding ISU55_18940 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_18940 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ISU55_18945 IPR032404 Two-component sensor protein CpxA, periplasmic domain ISU55_18945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_18945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_18945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_18945 IPR003660 HAMP domain ISU55_18945 IPR038515 CpxA, periplasmic domain superfamily ISU55_18945 IPR005467 Histidine kinase domain ISU55_18945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_18945 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_18950 IPR011006 CheY-like superfamily ISU55_18950 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_18950 IPR001789 Signal transduction response regulator, receiver domain ISU55_18950 IPR039420 Transcriptional regulatory protein WalR-like ISU55_18950 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_18955 IPR012899 LTXXQ motif family protein ISU55_18965 IPR010106 Recombination-promoting nuclease RpnA ISU55_18965 IPR006842 Transposase (putative), YhgA-like ISU55_18970 IPR002524 Cation efflux protein ISU55_18970 IPR027470 Cation efflux protein, cytoplasmic domain ISU55_18970 IPR023783 Cation efflux pump FieF ISU55_18970 IPR036837 Cation efflux protein, cytoplasmic domain superfamily ISU55_18970 IPR027469 Cation efflux transmembrane domain superfamily ISU55_18975 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic ISU55_18975 IPR015912 Phosphofructokinase, conserved site ISU55_18975 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type ISU55_18975 IPR022953 ATP-dependent 6-phosphofructokinase ISU55_18975 IPR000023 Phosphofructokinase domain ISU55_18975 IPR035966 Phosphofructokinase superfamily ISU55_18980 IPR000957 Sulphate/thiosulphate-binding, conserved site ISU55_18980 IPR005669 Thiosulphate/Sulfate-binding protein ISU55_18980 IPR034408 Sulphate/thiosulphate-binding site ISU55_18990 IPR030676 Citrate carrier CitT-related ISU55_18990 IPR001898 Solute carrier family 13 ISU55_18995 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ISU55_18995 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase ISU55_18995 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ISU55_19000 IPR001270 ClpA/B family ISU55_19000 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_19000 IPR002611 IstB-like ATP-binding protein ISU55_19000 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19000 IPR003593 AAA+ ATPase domain ISU55_19005 IPR017894 HTH domain, IS21 transposase-type ISU55_19005 IPR001584 Integrase, catalytic core ISU55_19005 IPR006120 Resolvase, HTH domain ISU55_19005 IPR012337 Ribonuclease H-like superfamily ISU55_19005 IPR036397 Ribonuclease H superfamily ISU55_19010 IPR024078 Putative deacetylase LmbE-like domain superfamily ISU55_19010 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related ISU55_19015 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_19015 IPR000847 Transcription regulator HTH, LysR ISU55_19015 IPR036390 Winged helix DNA-binding domain superfamily ISU55_19015 IPR005119 LysR, substrate-binding ISU55_19020 IPR020861 Triosephosphate isomerase, active site ISU55_19020 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic ISU55_19020 IPR035990 Triosephosphate isomerase superfamily ISU55_19020 IPR000652 Triosephosphate isomerase ISU55_19020 IPR013785 Aldolase-type TIM barrel ISU55_19025 IPR009918 Protein of unknown function DUF1454 ISU55_19030 IPR008523 Protein of unknown function DUF805 ISU55_19035 IPR017927 FAD-binding domain, ferredoxin reductase-type ISU55_19035 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ISU55_19035 IPR001433 Oxidoreductase FAD/NAD(P)-binding ISU55_19035 IPR017938 Riboflavin synthase-like beta-barrel ISU55_19035 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ISU55_19035 IPR033892 Ferredoxin--NADP reductase, bacteria ISU55_19040 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase ISU55_19045 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_19045 IPR000577 Carbohydrate kinase, FGGY ISU55_19045 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_19045 IPR005999 Glycerol kinase ISU55_19045 IPR018483 Carbohydrate kinase, FGGY, conserved site ISU55_19050 IPR022357 Major intrinsic protein, conserved site ISU55_19050 IPR000425 Major intrinsic protein ISU55_19050 IPR023271 Aquaporin-like ISU55_19055 IPR009252 Cell division protein ZapB ISU55_19060 IPR036515 Transposase IS200-like superfamily ISU55_19060 IPR002686 Transposase IS200-like ISU55_19065 IPR003593 AAA+ ATPase domain ISU55_19065 IPR039421 Type I protein exporter ISU55_19065 IPR036640 ABC transporter type 1, transmembrane domain superfamily ISU55_19065 IPR003439 ABC transporter-like ISU55_19065 IPR011527 ABC transporter type 1, transmembrane domain ISU55_19065 IPR005074 Peptidase C39, bacteriocin processing ISU55_19065 IPR017871 ABC transporter, conserved site ISU55_19065 IPR033838 Colicin V processing peptidase ISU55_19065 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19070 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ISU55_19070 IPR006144 Secretion protein HlyD, conserved site ISU55_19085 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ISU55_19085 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ISU55_19085 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria ISU55_19085 IPR010203 Regulator of ribonuclease activity A ISU55_19090 IPR026046 UbiA prenyltransferase domain containing protein 1 ISU55_19090 IPR000537 UbiA prenyltransferase family ISU55_19090 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase ISU55_19095 IPR003593 AAA+ ATPase domain ISU55_19095 IPR003959 ATPase, AAA-type, core ISU55_19095 IPR019489 Clp ATPase, C-terminal ISU55_19095 IPR004491 Heat shock protein HslU ISU55_19095 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19100 IPR022281 ATP-dependent protease, HslV subunit ISU55_19100 IPR029055 Nucleophile aminohydrolases, N-terminal ISU55_19100 IPR001353 Proteasome, subunit alpha/beta ISU55_19100 IPR023333 Proteasome B-type subunit ISU55_19105 IPR011930 Cell division protein FtsN ISU55_19105 IPR007730 Sporulation-like domain ISU55_19105 IPR036680 Sporulation-like domain superfamily ISU55_19110 IPR028082 Periplasmic binding protein-like I ISU55_19110 IPR000843 LacI-type HTH domain ISU55_19110 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_19115 IPR011545 DEAD/DEAH box helicase domain ISU55_19115 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily ISU55_19115 IPR041222 Primosomal protein N', 3' DNA-binding domain ISU55_19115 IPR005259 Primosomal protein N' ISU55_19115 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19115 IPR001650 Helicase, C-terminal ISU55_19115 IPR041236 Primosomal protein N, C-terminal domain ISU55_19115 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain ISU55_19115 IPR014001 Helicase superfamily 1/2, ATP-binding domain ISU55_19120 IPR002150 Ribosomal protein L31 ISU55_19120 IPR034704 L28p-like ISU55_19120 IPR027491 Ribosomal protein L31 type A ISU55_19120 IPR042105 Ribosomal protein L31 superfamily ISU55_19125 IPR008024 YiaAB two helix ISU55_19125 IPR038972 Inner membrane protein YiaA-like ISU55_19130 IPR010985 Ribbon-helix-helix ISU55_19130 IPR023453 Methionine repressor MetJ domain superfamily ISU55_19130 IPR002084 Methionine repressor MetJ ISU55_19140 IPR036393 Acetylglutamate kinase-like superfamily ISU55_19140 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain ISU55_19140 IPR001048 Aspartate/glutamate/uridylate kinase ISU55_19140 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding ISU55_19140 IPR001341 Aspartate kinase ISU55_19140 IPR036291 NAD(P)-binding domain superfamily ISU55_19140 IPR018042 Aspartate kinase, conserved site ISU55_19140 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I ISU55_19140 IPR001342 Homoserine dehydrogenase, catalytic ISU55_19140 IPR019811 Homoserine dehydrogenase, conserved site ISU55_19145 IPR003171 Methylenetetrahydrofolate reductase ISU55_19145 IPR004620 5,10-methylenetetrahydrofolate reductase ISU55_19145 IPR029041 FAD-linked oxidoreductase-like ISU55_19155 IPR014036 DeoR C-terminal sensor domain ISU55_19155 IPR036390 Winged helix DNA-binding domain superfamily ISU55_19155 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_19155 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ISU55_19155 IPR001034 DeoR-type HTH domain ISU55_19155 IPR037171 NagB/RpiA transferase-like ISU55_19160 IPR023662 Rhomboid protease GlpG ISU55_19160 IPR038236 GlpG peptidase, N-terminal domain superfamily ISU55_19160 IPR022732 Peptidase S54, GlpG peptidase, N-terminal ISU55_19160 IPR022764 Peptidase S54, rhomboid domain ISU55_19160 IPR035952 Rhomboid-like superfamily ISU55_19165 IPR023695 Thiosulfate sulfurtransferase, bacterial ISU55_19165 IPR036873 Rhodanese-like domain superfamily ISU55_19165 IPR001763 Rhodanese-like domain ISU55_19170 IPR041617 MalT-like TPR region ISU55_19170 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19170 IPR023768 Transcriptional regulator HTH-type, MalT ISU55_19170 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_19170 IPR000792 Transcription regulator LuxR, C-terminal ISU55_19170 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_19170 IPR011990 Tetratricopeptide-like helical domain superfamily ISU55_19175 IPR011833 Glycogen/starch/alpha-glucan phosphorylase ISU55_19175 IPR000811 Glycosyl transferase, family 35 ISU55_19175 IPR035090 Phosphorylase pyridoxal-phosphate attachment site ISU55_19180 IPR035090 Phosphorylase pyridoxal-phosphate attachment site ISU55_19180 IPR000811 Glycosyl transferase, family 35 ISU55_19180 IPR011833 Glycogen/starch/alpha-glucan phosphorylase ISU55_19185 IPR017853 Glycoside hydrolase superfamily ISU55_19185 IPR003385 Glycoside hydrolase, family 77 ISU55_19190 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal ISU55_19190 IPR017726 Fe/S biogenesis protein NfuA ISU55_19190 IPR035903 HesB-like domain superfamily ISU55_19190 IPR034904 Fe-S cluster assembly domain superfamily ISU55_19190 IPR000361 FeS cluster biogenesis ISU55_19195 IPR000836 Phosphoribosyltransferase domain ISU55_19195 IPR029057 Phosphoribosyltransferase-like ISU55_19195 IPR005222 Competence protein ComF ISU55_19200 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase ISU55_19200 IPR000073 Alpha/beta hydrolase fold-1 ISU55_19200 IPR029058 Alpha/Beta hydrolase fold ISU55_19205 IPR036275 YdgH-like superfamily ISU55_19205 IPR010854 Domain of unknown function DUF1471 ISU55_19205 IPR025543 Dodecin-like ISU55_19210 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_19210 IPR036390 Winged helix DNA-binding domain superfamily ISU55_19210 IPR023732 Probable [Fe-S]-dependent transcriptional repressor ISU55_19210 IPR015102 Transcriptional regulator HTH-type, FeoC ISU55_19215 IPR003373 Ferrous iron transport protein B ISU55_19215 IPR011640 Ferrous iron transport protein B, C-terminal ISU55_19215 IPR041069 FeoB, cytosolic helical domain ISU55_19215 IPR030389 FeoB-type guanine nucleotide-binding (G) domain ISU55_19215 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ISU55_19215 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19215 IPR005225 Small GTP-binding protein domain ISU55_19220 IPR008988 Transcriptional repressor, C-terminal ISU55_19220 IPR007167 Ferrous iron transporter FeoA domain ISU55_19220 IPR038157 Ferrous iron transporter, core domain ISU55_19225 IPR032639 Tex protein, YqgF-like domain ISU55_19225 IPR003029 S1 domain ISU55_19225 IPR012340 Nucleic acid-binding, OB-fold ISU55_19225 IPR010994 RuvA domain 2-like ISU55_19225 IPR012337 Ribonuclease H-like superfamily ISU55_19225 IPR023323 Tex-like domain superfamily ISU55_19225 IPR041692 HHH domain 9 ISU55_19225 IPR022967 RNA-binding domain, S1 ISU55_19225 IPR023319 Tex-like protein, HTH domain superfamily ISU55_19225 IPR018974 Tex-like protein, N-terminal ISU55_19225 IPR006641 YqgF/RNase H-like domain ISU55_19225 IPR037027 YqgF/RNase H-like domain superfamily ISU55_19230 IPR018151 Transcription elongation factor, GreA/GreB, conserved site ISU55_19230 IPR028624 Transcription elongation factor GreA/GreB ISU55_19230 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal ISU55_19230 IPR023459 Transcription elongation factor GreA/GreB family ISU55_19230 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal ISU55_19230 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily ISU55_19230 IPR006358 Transcription elongation factor GreB ISU55_19230 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily ISU55_19235 IPR011006 CheY-like superfamily ISU55_19235 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_19235 IPR001789 Signal transduction response regulator, receiver domain ISU55_19235 IPR001867 OmpR/PhoB-type DNA-binding domain ISU55_19235 IPR039420 Transcriptional regulatory protein WalR-like ISU55_19235 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_19240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ISU55_19240 IPR003660 HAMP domain ISU55_19240 IPR003594 Histidine kinase/HSP90-like ATPase ISU55_19240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ISU55_19240 IPR005467 Histidine kinase domain ISU55_19240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ISU55_19240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ISU55_19245 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal ISU55_19245 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising ISU55_19245 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal ISU55_19245 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site ISU55_19250 IPR000397 Heat shock protein Hsp33 ISU55_19250 IPR016154 Heat shock protein Hsp33, C-terminal ISU55_19250 IPR016153 Heat shock protein Hsp33, N-terminal ISU55_19250 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily ISU55_19255 IPR036986 RNA-binding S4 domain superfamily ISU55_19255 IPR002942 RNA-binding S4 domain ISU55_19255 IPR025708 Heat shock protein 15 ISU55_19260 IPR036412 HAD-like superfamily ISU55_19260 IPR006439 HAD hydrolase, subfamily IA ISU55_19260 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_19260 IPR023214 HAD superfamily ISU55_19265 IPR010771 Intracellular growth attenuator IgaA ISU55_19270 IPR015797 NUDIX hydrolase-like domain superfamily ISU55_19270 IPR020084 NUDIX hydrolase, conserved site ISU55_19270 IPR000086 NUDIX hydrolase domain ISU55_19275 IPR001264 Glycosyl transferase, family 51 ISU55_19275 IPR012338 Beta-lactamase/transpeptidase-like ISU55_19275 IPR001460 Penicillin-binding protein, transpeptidase ISU55_19275 IPR031376 Penicillin-binding protein, OB-like domain ISU55_19275 IPR036950 Penicillin binding protein transglycosylase domain ISU55_19275 IPR023346 Lysozyme-like domain superfamily ISU55_19300 IPR013355 Type IV pilus secretin PilQ ISU55_19300 IPR005644 NolW-like ISU55_19300 IPR004845 Type II secretion system GspD, conserved site ISU55_19300 IPR004846 Type II/III secretion system ISU55_19300 IPR011662 Secretin/TonB, short N-terminal domain ISU55_19300 IPR038591 NolW-like superfamily ISU55_19300 IPR001775 GspD/PilQ family ISU55_19305 IPR023000 Shikimate kinase, conserved site ISU55_19305 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19305 IPR000623 Shikimate kinase/Threonine synthase-like 1 ISU55_19305 IPR031322 Shikimate kinase/gluconokinase ISU55_19310 IPR016037 3-dehydroquinate synthase AroB ISU55_19310 IPR030963 3-dehydroquinate synthase family ISU55_19310 IPR030960 3-dehydroquinate synthase domain ISU55_19315 IPR036680 Sporulation-like domain superfamily ISU55_19315 IPR007730 Sporulation-like domain ISU55_19320 IPR012327 D12 class N6 adenine-specific DNA methyltransferase ISU55_19320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_19320 IPR023095 Adenine-specific methyltransferase, domain 2 ISU55_19320 IPR012263 Adenine modification methylase, M.EcoRV-type ISU55_19320 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ISU55_19325 IPR013785 Aldolase-type TIM barrel ISU55_19325 IPR026019 Ribulose-phosphate 3-epimerase ISU55_19325 IPR011060 Ribulose-phosphate binding barrel ISU55_19325 IPR000056 Ribulose-phosphate 3-epimerase-like ISU55_19330 IPR037512 Phosphoglycolate phosphatase, prokaryotic ISU55_19330 IPR006439 HAD hydrolase, subfamily IA ISU55_19330 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_19330 IPR023214 HAD superfamily ISU55_19330 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ISU55_19330 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic ISU55_19330 IPR036412 HAD-like superfamily ISU55_19335 IPR024109 Tryptophan-tRNA ligase, bacterial-type ISU55_19335 IPR002306 Tryptophan-tRNA ligase ISU55_19335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ISU55_19335 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ISU55_19335 IPR002305 Aminoacyl-tRNA synthetase, class Ic ISU55_19340 IPR036291 NAD(P)-binding domain superfamily ISU55_19340 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site ISU55_19340 IPR006367 Sirohaem synthase, N-terminal ISU55_19340 IPR019478 Sirohaem synthase, dimerisation domain ISU55_19340 IPR028281 Siroheme synthase, central domain ISU55_19340 IPR012409 Sirohaem synthase ISU55_19340 IPR037115 Sirohaem synthase, dimerisation domain superfamily ISU55_19340 IPR006366 Uroporphyrin-III C-methyltransferase ISU55_19340 IPR014776 Tetrapyrrole methylase, subdomain 2 ISU55_19340 IPR014777 Tetrapyrrole methylase, subdomain 1 ISU55_19340 IPR035996 Tetrapyrrole methylase superfamily ISU55_19340 IPR000878 Tetrapyrrole methylase ISU55_19345 IPR024002 Formate/nitrite transporter, conserved site ISU55_19345 IPR023271 Aquaporin-like ISU55_19345 IPR000292 Formate/nitrite transporter ISU55_19350 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily ISU55_19350 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type ISU55_19350 IPR017881 Nitrite reductase (NADH) small subunit ISU55_19355 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site ISU55_19355 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_19355 IPR007419 BFD-like [2Fe-2S]-binding domain ISU55_19355 IPR023753 FAD/NAD(P)-binding domain ISU55_19355 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB ISU55_19355 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain ISU55_19355 IPR017121 Nitrite reductase [NAD(P)H], large subunit ISU55_19355 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain ISU55_19355 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily ISU55_19355 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily ISU55_19355 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal ISU55_19360 IPR032466 Metal-dependent hydrolase ISU55_19360 IPR013108 Amidohydrolase 3 ISU55_19360 IPR011059 Metal-dependent hydrolase, composite domain superfamily ISU55_19365 IPR011701 Major facilitator superfamily ISU55_19365 IPR020846 Major facilitator superfamily domain ISU55_19365 IPR036259 MFS transporter superfamily ISU55_19365 IPR023528 Major facilitator superfamily transporter, TsgA ISU55_19375 IPR028082 Periplasmic binding protein-like I ISU55_19375 IPR000843 LacI-type HTH domain ISU55_19375 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ISU55_19385 IPR012337 Ribonuclease H-like superfamily ISU55_19385 IPR006120 Resolvase, HTH domain ISU55_19385 IPR001584 Integrase, catalytic core ISU55_19385 IPR036397 Ribonuclease H superfamily ISU55_19385 IPR017894 HTH domain, IS21 transposase-type ISU55_19390 IPR003593 AAA+ ATPase domain ISU55_19390 IPR001270 ClpA/B family ISU55_19390 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_19390 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19390 IPR002611 IstB-like ATP-binding protein ISU55_19400 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site ISU55_19400 IPR029000 Cyclophilin-like domain superfamily ISU55_19400 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain ISU55_19405 IPR033186 Helicase HerA-like C-terminal ISU55_19405 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19410 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain ISU55_19410 IPR029062 Class I glutamine amidotransferase-like ISU55_19410 IPR017926 Glutamine amidotransferase ISU55_19415 IPR015424 Pyridoxal phosphate-dependent transferase ISU55_19415 IPR005814 Aminotransferase class-III ISU55_19415 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ISU55_19415 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ISU55_19415 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria ISU55_19415 IPR004636 Acetylornithine/Succinylornithine transaminase family ISU55_19420 IPR032692 Integral membrane protein YccS, N-terminal ISU55_19420 IPR010020 Integral membrane protein, YccS/YhfK ISU55_19425 IPR000595 Cyclic nucleotide-binding domain ISU55_19425 IPR036390 Winged helix DNA-binding domain superfamily ISU55_19425 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_19425 IPR018490 Cyclic nucleotide-binding-like ISU55_19425 IPR018488 Cyclic nucleotide-binding, conserved site ISU55_19425 IPR018335 Transcription regulator HTH, Crp-type, conserved site ISU55_19425 IPR014710 RmlC-like jelly roll fold ISU55_19425 IPR012318 Crp-type HTH domain ISU55_19430 IPR003718 OsmC/Ohr family ISU55_19430 IPR015946 K homology domain-like, alpha/beta ISU55_19430 IPR036102 OsmC/Ohr superfamily ISU55_19440 IPR006082 Phosphoribulokinase ISU55_19440 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19440 IPR006083 Phosphoribulokinase/uridine kinase ISU55_19445 IPR036685 YehU-like superfamily ISU55_19445 IPR010648 Uncharacterised protein family UPF0270 ISU55_19450 IPR000952 AB hydrolase 4, conserved site ISU55_19450 IPR000073 Alpha/beta hydrolase fold-1 ISU55_19450 IPR012020 AB hydrolase 4 family ISU55_19450 IPR029058 Alpha/Beta hydrolase fold ISU55_19455 IPR001123 Amino acid exporter protein, LeuE-type ISU55_19460 IPR010068 Taurine ABC transporter, substrate-binding protein TauA ISU55_19460 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_19460 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain ISU55_19465 IPR015859 ABC transporter, taurine import, TauD ISU55_19465 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19465 IPR003593 AAA+ ATPase domain ISU55_19465 IPR003439 ABC transporter-like ISU55_19465 IPR017871 ABC transporter, conserved site ISU55_19470 IPR035906 MetI-like superfamily ISU55_19470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_19475 IPR042098 Taurine dioxygenase TauD-like superfamily ISU55_19475 IPR003819 TauD/TfdA-like domain ISU55_19485 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_19485 IPR001173 Glycosyltransferase 2-like ISU55_19495 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG ISU55_19495 IPR029039 Flavoprotein-like superfamily ISU55_19495 IPR003680 Flavodoxin-like fold ISU55_19500 IPR006153 Cation/H+ exchanger ISU55_19500 IPR004771 K+/H+ exchanger ISU55_19500 IPR020884 Glutathione-regulated potassium-efflux system protein KefB ISU55_19500 IPR038770 Sodium/solute symporter superfamily ISU55_19500 IPR036291 NAD(P)-binding domain superfamily ISU55_19500 IPR003148 Regulator of K+ conductance, N-terminal ISU55_19505 IPR012658 Conserved hypothetical protein CHP02443 ISU55_19510 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ISU55_19515 IPR007236 SlyX ISU55_19520 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ISU55_19520 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal ISU55_19520 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily ISU55_19525 IPR039446 Transcriptional regulator DauR-like ISU55_19525 IPR039445 Transcriptional regulator DauR-like, HTH domain ISU55_19525 IPR013559 YheO-like ISU55_19530 IPR017463 Sulphur relay, TusD/DsrE ISU55_19530 IPR003787 Sulphur relay, DsrE/F-like protein ISU55_19530 IPR027396 DsrEFH-like ISU55_19535 IPR017462 Sulphur relay, TusC/DsrF ISU55_19535 IPR037450 Sulphur relay, TusC ISU55_19535 IPR027396 DsrEFH-like ISU55_19535 IPR003787 Sulphur relay, DsrE/F-like protein ISU55_19540 IPR007215 Sulphur relay, TusB/DsrH ISU55_19540 IPR027396 DsrEFH-like ISU55_19540 IPR023526 Sulphur relay, TusB ISU55_19545 IPR005679 Ribosomal protein S12, bacterial-type ISU55_19545 IPR012340 Nucleic acid-binding, OB-fold ISU55_19545 IPR006032 Ribosomal protein S12/S23 ISU55_19550 IPR023798 Ribosomal protein S7 domain ISU55_19550 IPR036823 Ribosomal protein S7 domain superfamily ISU55_19550 IPR005717 Ribosomal protein S7, bacterial/organellar-type ISU55_19550 IPR000235 Ribosomal protein S5/S7 ISU55_19550 IPR020606 Ribosomal protein S7, conserved site ISU55_19555 IPR035649 EFG, domain V ISU55_19555 IPR035647 EF-G domain III/V-like ISU55_19555 IPR009022 Elongation factor G, domain III ISU55_19555 IPR041095 Elongation Factor G, domain II ISU55_19555 IPR005517 Translation elongation factor EFG/EF2, domain IV ISU55_19555 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19555 IPR031157 Tr-type G domain, conserved site ISU55_19555 IPR000640 Elongation factor EFG, domain V-like ISU55_19555 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_19555 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_19555 IPR005225 Small GTP-binding protein domain ISU55_19555 IPR000795 Transcription factor, GTP-binding domain ISU55_19555 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_19555 IPR004540 Translation elongation factor EFG/EF2 ISU55_19555 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_19560 IPR000795 Transcription factor, GTP-binding domain ISU55_19560 IPR005225 Small GTP-binding protein domain ISU55_19560 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19560 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain ISU55_19560 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle ISU55_19560 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ISU55_19560 IPR004161 Translation elongation factor EFTu-like, domain 2 ISU55_19560 IPR033720 Elongation factor Tu, domain 2 ISU55_19560 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_19560 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ISU55_19560 IPR031157 Tr-type G domain, conserved site ISU55_19565 IPR002686 Transposase IS200-like ISU55_19565 IPR036515 Transposase IS200-like superfamily ISU55_19570 IPR007419 BFD-like [2Fe-2S]-binding domain ISU55_19570 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily ISU55_19575 IPR012347 Ferritin-like ISU55_19575 IPR008331 Ferritin/DPS protein domain ISU55_19575 IPR009078 Ferritin-like superfamily ISU55_19575 IPR009040 Ferritin-like diiron domain ISU55_19575 IPR002024 Bacterioferritin ISU55_19580 IPR001848 Ribosomal protein S10 ISU55_19580 IPR018268 Ribosomal protein S10, conserved site ISU55_19580 IPR036838 Ribosomal protein S10 domain superfamily ISU55_19580 IPR027486 Ribosomal protein S10 domain ISU55_19585 IPR019927 Ribosomal protein L3, bacterial/organelle-type ISU55_19585 IPR009000 Translation protein, beta-barrel domain superfamily ISU55_19585 IPR000597 Ribosomal protein L3 ISU55_19585 IPR019926 Ribosomal protein L3, conserved site ISU55_19590 IPR023574 Ribosomal protein L4 domain superfamily ISU55_19590 IPR013005 50S ribosomal protein uL4 ISU55_19590 IPR002136 Ribosomal protein L4/L1e ISU55_19595 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ISU55_19595 IPR012678 Ribosomal protein L23/L15e core domain superfamily ISU55_19595 IPR013025 Ribosomal protein L25/L23 ISU55_19595 IPR001014 Ribosomal protein L23/L25, conserved site ISU55_19600 IPR022669 Ribosomal protein L2, C-terminal ISU55_19600 IPR022671 Ribosomal protein L2, conserved site ISU55_19600 IPR014726 Ribosomal protein L2, domain 3 ISU55_19600 IPR005880 Ribosomal protein L2, bacterial/organellar-type ISU55_19600 IPR002171 Ribosomal protein L2 ISU55_19600 IPR012340 Nucleic acid-binding, OB-fold ISU55_19600 IPR014722 Ribosomal protein L2, domain 2 ISU55_19600 IPR022666 Ribosomal Proteins L2, RNA binding domain ISU55_19600 IPR008991 Translation protein SH3-like domain superfamily ISU55_19605 IPR020934 Ribosomal protein S19 conserved site ISU55_19605 IPR023575 Ribosomal protein S19, superfamily ISU55_19605 IPR002222 Ribosomal protein S19/S15 ISU55_19605 IPR005732 Ribosomal protein S19, bacterial-type ISU55_19610 IPR018260 Ribosomal protein L22/L17, conserved site ISU55_19610 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type ISU55_19610 IPR001063 Ribosomal protein L22/L17 ISU55_19610 IPR036394 Ribosomal protein L22/L17 superfamily ISU55_19615 IPR004087 K Homology domain ISU55_19615 IPR001351 Ribosomal protein S3, C-terminal ISU55_19615 IPR036419 Ribosomal protein S3, C-terminal domain superfamily ISU55_19615 IPR018280 Ribosomal protein S3, conserved site ISU55_19615 IPR015946 K homology domain-like, alpha/beta ISU55_19615 IPR004044 K Homology domain, type 2 ISU55_19615 IPR009019 K homology domain superfamily, prokaryotic type ISU55_19615 IPR005704 Ribosomal protein S3, bacterial-type ISU55_19620 IPR036920 Ribosomal protein L10e/L16 superfamily ISU55_19620 IPR000114 Ribosomal protein L16 ISU55_19620 IPR020798 Ribosomal protein L16, conserved site ISU55_19620 IPR016180 Ribosomal protein L10e/L16 ISU55_19625 IPR001854 Ribosomal protein L29/L35 ISU55_19625 IPR036049 Ribosomal protein L29/L35 superfamily ISU55_19625 IPR018254 Ribosomal protein L29, conserved site ISU55_19630 IPR019984 30S ribosomal protein S17 ISU55_19630 IPR019979 Ribosomal protein S17, conserved site ISU55_19630 IPR000266 Ribosomal protein S17/S11 ISU55_19630 IPR012340 Nucleic acid-binding, OB-fold ISU55_19635 IPR000218 Ribosomal protein L14P ISU55_19635 IPR005745 Ribosomal protein L14P, bacterial-type ISU55_19635 IPR019972 Ribosomal protein L14P, conserved site ISU55_19635 IPR036853 Ribosomal protein L14 superfamily ISU55_19640 IPR005825 Ribosomal protein L24/L26, conserved site ISU55_19640 IPR041988 Ribosomal Protein L26/L24, KOW domain ISU55_19640 IPR014722 Ribosomal protein L2, domain 2 ISU55_19640 IPR003256 Ribosomal protein L24 ISU55_19640 IPR008991 Translation protein SH3-like domain superfamily ISU55_19640 IPR005824 KOW ISU55_19645 IPR031309 Ribosomal protein L5, C-terminal ISU55_19645 IPR022803 Ribosomal protein L5 domain superfamily ISU55_19645 IPR031310 Ribosomal protein L5, N-terminal ISU55_19645 IPR002132 Ribosomal protein L5 ISU55_19645 IPR020930 Ribosomal protein L5, bacterial-type ISU55_19650 IPR018271 Ribosomal protein S14, conserved site ISU55_19650 IPR023036 Ribosomal protein S14, bacterial/plastid ISU55_19650 IPR001209 Ribosomal protein S14 ISU55_19655 IPR035987 Ribosomal protein S8 superfamily ISU55_19655 IPR000630 Ribosomal protein S8 ISU55_19660 IPR000702 Ribosomal protein L6 ISU55_19660 IPR020040 Ribosomal protein L6, alpha-beta domain ISU55_19660 IPR002358 Ribosomal protein L6, conserved site ISU55_19660 IPR019906 Ribosomal protein L6, bacterial-type ISU55_19660 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily ISU55_19665 IPR005484 Ribosomal protein L18 ISU55_19665 IPR004389 Ribosomal protein L18, bacterial-type ISU55_19670 IPR000851 Ribosomal protein S5 ISU55_19670 IPR018192 Ribosomal protein S5, N-terminal, conserved site ISU55_19670 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_19670 IPR005324 Ribosomal protein S5, C-terminal ISU55_19670 IPR005712 Ribosomal protein S5, bacterial-type ISU55_19670 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_19670 IPR013810 Ribosomal protein S5, N-terminal ISU55_19675 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ISU55_19675 IPR005996 Ribosomal protein L30, bacterial-type ISU55_19675 IPR018038 Ribosomal protein L30, conserved site ISU55_19675 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ISU55_19680 IPR021131 Ribosomal protein L18e/L15P ISU55_19680 IPR005749 Ribosomal protein L15, bacterial-type ISU55_19680 IPR030878 Ribosomal protein L15 ISU55_19680 IPR036227 Ribosomal L18e/L15P superfamily ISU55_19680 IPR001196 Ribosomal protein L15, conserved site ISU55_19685 IPR023201 SecY domain superfamily ISU55_19685 IPR030659 SecY conserved site ISU55_19685 IPR002208 SecY/SEC61-alpha family ISU55_19685 IPR026593 Protein translocase subunit SecY ISU55_19690 IPR035977 Ribosomal protein L36 superfamily ISU55_19690 IPR000473 Ribosomal protein L36 ISU55_19695 IPR019980 Ribosomal protein S13, bacterial-type ISU55_19695 IPR027437 30s ribosomal protein S13, C-terminal ISU55_19695 IPR001892 Ribosomal protein S13 ISU55_19695 IPR010979 Ribosomal protein S13-like, H2TH ISU55_19695 IPR018269 Ribosomal protein S13, conserved site ISU55_19700 IPR001971 Ribosomal protein S11 ISU55_19700 IPR036967 Ribosomal protein S11 superfamily ISU55_19700 IPR018102 Ribosomal S11, conserved site ISU55_19700 IPR019981 Ribosomal protein S11, bacterial-type ISU55_19705 IPR018079 Ribosomal protein S4, conserved site ISU55_19705 IPR005709 Ribosomal protein S4, bacterial-type ISU55_19705 IPR001912 Ribosomal protein S4/S9, N-terminal ISU55_19705 IPR022801 Ribosomal protein S4/S9 ISU55_19705 IPR036986 RNA-binding S4 domain superfamily ISU55_19705 IPR002942 RNA-binding S4 domain ISU55_19710 IPR036603 RNA polymerase, RBP11-like subunit ISU55_19710 IPR011773 DNA-directed RNA polymerase, alpha subunit ISU55_19710 IPR011260 RNA polymerase, alpha subunit, C-terminal ISU55_19710 IPR011262 DNA-directed RNA polymerase, insert domain ISU55_19710 IPR036643 DNA-directed RNA polymerase, insert domain superfamily ISU55_19710 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type ISU55_19715 IPR000456 Ribosomal protein L17 ISU55_19715 IPR036373 Ribosomal protein L17 superfamily ISU55_19720 IPR009061 Putative DNA-binding domain superfamily ISU55_19720 IPR000551 MerR-type HTH domain ISU55_19720 IPR011788 Zn(II)-responsive transcriptional regulator ISU55_19725 IPR005589 Alternative ribosome-rescue factor A ISU55_19730 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L ISU55_19730 IPR001185 Large-conductance mechanosensitive channel ISU55_19730 IPR019823 Large-conductance mechanosensitive channel, conserved site ISU55_19730 IPR036019 Gated mechanosensitive channel ISU55_19735 IPR036291 NAD(P)-binding domain superfamily ISU55_19735 IPR006036 Potassium uptake protein TrkA ISU55_19735 IPR003148 Regulator of K+ conductance, N-terminal ISU55_19735 IPR006037 Regulator of K+ conductance, C-terminal ISU55_19735 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ISU55_19740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_19740 IPR004573 rRNA small subunit methyltransferase B ISU55_19740 IPR023267 RNA (C5-cytosine) methyltransferase ISU55_19740 IPR006027 NusB/RsmB/TIM44 ISU55_19740 IPR035926 NusB-like superfamily ISU55_19740 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type ISU55_19740 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site ISU55_19740 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae ISU55_19745 IPR005793 Formyl transferase, C-terminal ISU55_19745 IPR037022 Formyl transferase, C-terminal domain superfamily ISU55_19745 IPR002376 Formyl transferase, N-terminal ISU55_19745 IPR005794 Methionyl-tRNA formyltransferase ISU55_19745 IPR036477 Formyl transferase, N-terminal domain superfamily ISU55_19745 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain ISU55_19745 IPR011034 Formyl transferase-like, C-terminal domain superfamily ISU55_19745 IPR001555 Phosphoribosylglycinamide formyltransferase, active site ISU55_19750 IPR036821 Peptide deformylase superfamily ISU55_19750 IPR023635 Peptide deformylase ISU55_19755 IPR003488 DNA recombination-mediator protein A ISU55_19755 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_19755 IPR041614 DprA, winged helix domain ISU55_19760 IPR007456 Smg ISU55_19765 IPR000380 DNA topoisomerase, type IA ISU55_19765 IPR013498 DNA topoisomerase, type IA, zn finger ISU55_19770 IPR023535 Threonylcarbamoyl-AMP synthase ISU55_19770 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ISU55_19770 IPR006070 YrdC-like domain ISU55_19775 IPR036291 NAD(P)-binding domain superfamily ISU55_19775 IPR041121 SDH, C-terminal ISU55_19775 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal ISU55_19775 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ISU55_19775 IPR022893 Shikimate dehydrogenase family ISU55_19775 IPR011342 Shikimate dehydrogenase ISU55_19780 IPR001451 Hexapeptide repeat ISU55_19780 IPR011004 Trimeric LpxA-like superfamily ISU55_19785 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19785 IPR002611 IstB-like ATP-binding protein ISU55_19785 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_19785 IPR001270 ClpA/B family ISU55_19785 IPR003593 AAA+ ATPase domain ISU55_19790 IPR001584 Integrase, catalytic core ISU55_19790 IPR006120 Resolvase, HTH domain ISU55_19790 IPR017894 HTH domain, IS21 transposase-type ISU55_19790 IPR036397 Ribonuclease H superfamily ISU55_19790 IPR012337 Ribonuclease H-like superfamily ISU55_19800 IPR011006 CheY-like superfamily ISU55_19800 IPR016032 Signal transduction response regulator, C-terminal effector ISU55_19800 IPR000792 Transcription regulator LuxR, C-terminal ISU55_19800 IPR001789 Signal transduction response regulator, receiver domain ISU55_19805 IPR000917 Sulfatase, N-terminal ISU55_19805 IPR017850 Alkaline-phosphatase-like, core domain superfamily ISU55_19805 IPR040423 Phosphoethanolamine transferase ISU55_19805 IPR012549 Phosphoethanolamine transferase, N-terminal ISU55_19810 IPR012354 Esterase/lipase ISU55_19810 IPR022742 Serine aminopeptidase, S33 ISU55_19810 IPR029058 Alpha/Beta hydrolase fold ISU55_19815 IPR004841 Amino acid permease/ SLC12A domain ISU55_19815 IPR004840 Amino acid permease, conserved site ISU55_19820 IPR024083 Fumarase/histidase, N-terminal ISU55_19820 IPR022313 Phenylalanine/histidine ammonia-lyases, active site ISU55_19820 IPR001106 Aromatic amino acid lyase ISU55_19820 IPR008948 L-Aspartase-like ISU55_19820 IPR005921 Histidine ammonia-lyase ISU55_19825 IPR035085 Urocanase, Rossmann-like domain ISU55_19825 IPR035400 Urocanase, N-terminal domain ISU55_19825 IPR036190 Urocanase superfamily ISU55_19825 IPR023637 Urocanase ISU55_19825 IPR023636 Urocanase conserved site ISU55_19825 IPR038364 Urocanase, central domain superfamily ISU55_19825 IPR035401 Urocanase, C-terminal domain ISU55_19830 IPR001926 Pyridoxal-phosphate dependent enzyme ISU55_19830 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ISU55_19830 IPR005856 Cysteine synthase ISU55_19830 IPR005858 Cysteine synthase CysM ISU55_19830 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ISU55_19835 IPR029057 Phosphoribosyltransferase-like ISU55_19835 IPR000836 Phosphoribosyltransferase domain ISU55_19835 IPR005764 Adenine phosphoribosyl transferase ISU55_19845 IPR011761 ATP-grasp fold ISU55_19850 IPR002491 ABC transporter periplasmic binding domain ISU55_19850 IPR033870 FatB domain ISU55_19855 IPR037294 ABC transporter, BtuC-like ISU55_19855 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_19860 IPR037294 ABC transporter, BtuC-like ISU55_19860 IPR000522 ABC transporter, permease protein, BtuC-like ISU55_19865 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19865 IPR003593 AAA+ ATPase domain ISU55_19865 IPR003439 ABC transporter-like ISU55_19865 IPR017871 ABC transporter, conserved site ISU55_19900 IPR007684 Zinc finger, Ogr/Delta-type ISU55_19910 IPR013762 Integrase-like, catalytic domain superfamily ISU55_19910 IPR002104 Integrase, catalytic domain ISU55_19910 IPR011010 DNA breaking-rejoining enzyme, catalytic core ISU55_19910 IPR004107 Integrase, SAM-like, N-terminal ISU55_19910 IPR010998 Integrase/recombinase, N-terminal ISU55_19910 IPR025166 Integrase, DNA-binding domain ISU55_19910 IPR038488 Integrase, DNA-binding domain superfamily ISU55_19920 IPR009057 Homeobox-like domain superfamily ISU55_19920 IPR018062 HTH domain AraC-type, conserved site ISU55_19920 IPR018060 DNA binding HTH domain, AraC-type ISU55_19920 IPR028082 Periplasmic binding protein-like I ISU55_19920 IPR020449 Transcription regulator HTH, AraC- type ISU55_19925 IPR001851 ABC transporter, permease ISU55_19930 IPR003439 ABC transporter-like ISU55_19930 IPR003593 AAA+ ATPase domain ISU55_19930 IPR017871 ABC transporter, conserved site ISU55_19930 IPR013455 ABC transporter, D-xylose, ATP-binding protein ISU55_19930 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19935 IPR028082 Periplasmic binding protein-like I ISU55_19935 IPR013456 D-xylose ABC transporter, substrate-binding protein ISU55_19935 IPR025997 Periplasmic binding protein ISU55_19940 IPR036237 Xylose isomerase-like superfamily ISU55_19940 IPR001998 Xylose isomerase ISU55_19940 IPR013452 Xylose isomerase, bacterial-type ISU55_19945 IPR018484 Carbohydrate kinase, FGGY, N-terminal ISU55_19945 IPR006000 Xylulokinase ISU55_19945 IPR018483 Carbohydrate kinase, FGGY, conserved site ISU55_19945 IPR018485 Carbohydrate kinase, FGGY, C-terminal ISU55_19945 IPR000577 Carbohydrate kinase, FGGY ISU55_19955 IPR013783 Immunoglobulin-like fold ISU55_19955 IPR008962 PapD-like superfamily ISU55_19955 IPR036316 Pili assembly chaperone, C-terminal domain superfamily ISU55_19955 IPR001829 Pili assembly chaperone, bacterial ISU55_19955 IPR018046 Pili assembly chaperone, conserved site ISU55_19955 IPR016147 Pili assembly chaperone, N-terminal ISU55_19955 IPR016148 Pili assembly chaperone, C-terminal ISU55_19965 IPR000259 Fimbrial-type adhesion domain ISU55_19965 IPR036937 Fimbrial-type adhesion domain superfamily ISU55_19965 IPR008966 Adhesion domain superfamily ISU55_19970 IPR032905 O-acetyltransferase WecH ISU55_19970 IPR002656 Acyltransferase 3 ISU55_19990 IPR001584 Integrase, catalytic core ISU55_19990 IPR006120 Resolvase, HTH domain ISU55_19990 IPR036397 Ribonuclease H superfamily ISU55_19990 IPR017894 HTH domain, IS21 transposase-type ISU55_19990 IPR012337 Ribonuclease H-like superfamily ISU55_19995 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_19995 IPR002611 IstB-like ATP-binding protein ISU55_19995 IPR001270 ClpA/B family ISU55_19995 IPR003593 AAA+ ATPase domain ISU55_19995 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ISU55_20010 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU55_20020 IPR036624 Hcp1-like superfamily ISU55_20020 IPR008514 Type VI secretion system effector, Hcp ISU55_20030 IPR010794 Maltose operon periplasmic ISU55_20035 IPR023738 Maltoporin ISU55_20035 IPR003192 Porin, LamB-type ISU55_20035 IPR036998 Porin, LamB-type superfamily ISU55_20040 IPR040582 MalK, OB fold domain ISU55_20040 IPR008995 Molybdate/tungstate binding, C-terminal ISU55_20040 IPR003593 AAA+ ATPase domain ISU55_20040 IPR003439 ABC transporter-like ISU55_20040 IPR015855 ABC transporter, maltose/maltodextrin import, MalK ISU55_20040 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_20040 IPR017871 ABC transporter, conserved site ISU55_20050 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein ISU55_20050 IPR006059 Bacterial extracellular solute-binding protein ISU55_20050 IPR006061 Solute-binding family 1, conserved site ISU55_20055 IPR035906 MetI-like superfamily ISU55_20055 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like ISU55_20055 IPR035277 MalF, N-terminal ISU55_20055 IPR029345 Maltose transport system permease protein MalF, P2 domain ISU55_20055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_20060 IPR035906 MetI-like superfamily ISU55_20060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_20065 IPR009315 Phosphate-starvation-induced PsiE ISU55_20065 IPR020948 Phosphate-starvation-induced PsiE-like ISU55_20070 IPR001672 Phosphoglucose isomerase (PGI) ISU55_20070 IPR023096 Phosphoglucose isomerase, C-terminal ISU55_20070 IPR018189 Phosphoglucose isomerase, conserved site ISU55_20070 IPR035476 Phosphoglucose isomerase, SIS domain 1 ISU55_20070 IPR035482 Phosphoglucose isomerase, SIS domain 2 ISU55_20075 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain ISU55_20075 IPR001048 Aspartate/glutamate/uridylate kinase ISU55_20075 IPR036393 Acetylglutamate kinase-like superfamily ISU55_20075 IPR005260 Aspartate kinase, monofunctional class ISU55_20075 IPR002912 ACT domain ISU55_20075 IPR001341 Aspartate kinase ISU55_20075 IPR018042 Aspartate kinase, conserved site ISU55_20080 IPR035251 ShlB, POTRA domain ISU55_20080 IPR005565 Haemolysin activator HlyB, C-terminal ISU55_20080 IPR027282 Two partner secretion pathway transporter ISU55_20080 IPR034746 POTRA domain ISU55_20080 IPR013686 Polypeptide-transport-associated, ShlB-type ISU55_20085 IPR011050 Pectin lyase fold/virulence factor ISU55_20085 IPR012334 Pectin lyase fold ISU55_20085 IPR025157 Hemagglutinin repeat ISU55_20085 IPR008638 Filamentous haemagglutinin, N-terminal ISU55_20090 IPR036724 Cobalamin-binding domain superfamily ISU55_20090 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily ISU55_20090 IPR006158 Cobalamin (vitamin B12)-binding domain ISU55_20090 IPR011005 Dihydropteroate synthase-like ISU55_20090 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ISU55_20090 IPR004223 Vitamin B12-dependent methionine synthase, activation domain ISU55_20090 IPR000489 Pterin-binding domain ISU55_20090 IPR036594 Methionine synthase domain ISU55_20090 IPR011822 Cobalamin-dependent methionine synthase ISU55_20090 IPR033706 Methionine synthase, B12-binding domain ISU55_20090 IPR003726 Homocysteine-binding domain ISU55_20090 IPR036589 Homocysteine-binding domain superfamily ISU55_20100 IPR010452 Isocitrate dehydrogenase kinasephosphatase ISU55_20105 IPR039556 ICL/PEPM domain ISU55_20105 IPR040442 Pyruvate kinase-like domain superfamily ISU55_20105 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ISU55_20105 IPR006254 Isocitrate lyase ISU55_20105 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site ISU55_20110 IPR011076 Malate synthase-like superfamily ISU55_20110 IPR006252 Malate synthase A ISU55_20110 IPR001465 Malate synthase ISU55_20110 IPR019830 Malate synthase, conserved site ISU55_20115 IPR033752 MetA family ISU55_20115 IPR029062 Class I glutamine amidotransferase-like ISU55_20115 IPR005697 Homoserine O-succinyltransferase MetA ISU55_20150 IPR000524 Transcription regulator HTH, GntR ISU55_20150 IPR036390 Winged helix DNA-binding domain superfamily ISU55_20150 IPR008920 Transcription regulator FadR/GntR, C-terminal ISU55_20150 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_20150 IPR011711 GntR, C-terminal ISU55_20155 IPR020846 Major facilitator superfamily domain ISU55_20155 IPR036259 MFS transporter superfamily ISU55_20155 IPR011701 Major facilitator superfamily ISU55_20155 IPR004638 Drug resistance transporter EmrB-like ISU55_20170 IPR011611 Carbohydrate kinase PfkB ISU55_20170 IPR002139 Ribokinase/fructokinase ISU55_20170 IPR029056 Ribokinase-like ISU55_20170 IPR011877 Ribokinase ISU55_20170 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ISU55_20175 IPR023064 D-ribose pyranase ISU55_20175 IPR023750 RbsD-like superfamily ISU55_20175 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU ISU55_20180 IPR023051 Potassium uptake protein, low affinity, Kup ISU55_20180 IPR003855 Potassium transporter ISU55_20185 IPR003593 AAA+ ATPase domain ISU55_20185 IPR011704 ATPase, dynein-related, AAA domain ISU55_20185 IPR041538 ATPase RavA-like, AAA lid domain ISU55_20185 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_20185 IPR022547 ATPase, RavA, C-terminal ISU55_20185 IPR023671 ATPase RavA ISU55_20190 IPR008912 Uncharacterised protein family CoxE-like ISU55_20190 IPR036465 von Willebrand factor A-like domain superfamily ISU55_20190 IPR002035 von Willebrand factor, type A ISU55_20190 IPR023481 Uncharacterised protein family ViaA ISU55_20195 IPR004618 Aspartate--ammonia ligase ISU55_20195 IPR006195 Aminoacyl-tRNA synthetase, class II ISU55_20200 IPR000485 AsnC-type HTH domain ISU55_20200 IPR011991 ArsR-like helix-turn-helix domain ISU55_20200 IPR036390 Winged helix DNA-binding domain superfamily ISU55_20200 IPR036388 Winged helix-like DNA-binding domain superfamily ISU55_20200 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ISU55_20200 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ISU55_20200 IPR019888 Transcription regulator AsnC-type ISU55_20200 IPR011008 Dimeric alpha-beta barrel ISU55_20205 IPR029039 Flavoprotein-like superfamily ISU55_20205 IPR008254 Flavodoxin/nitric oxide synthase ISU55_20210 IPR020595 MnmG-related, conserved site ISU55_20210 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related ISU55_20210 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG ISU55_20210 IPR026904 GidA associated domain 3 ISU55_20210 IPR036188 FAD/NAD(P)-binding domain superfamily ISU55_20215 IPR003682 rRNA small subunit methyltransferase G ISU55_20215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ISU55_20220 IPR005598 ATP synthase protein I ISU55_20225 IPR023011 ATP synthase, F0 complex, subunit A, active site ISU55_20225 IPR035908 ATP synthase, F0 complex, subunit A superfamily ISU55_20225 IPR000568 ATP synthase, F0 complex, subunit A ISU55_20230 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site ISU55_20230 IPR038662 F1F0 ATP synthase subunit C superfamily ISU55_20230 IPR002379 V-ATPase proteolipid subunit C-like domain ISU55_20230 IPR035921 F/V-ATP synthase subunit C superfamily ISU55_20230 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast ISU55_20230 IPR000454 ATP synthase, F0 complex, subunit C ISU55_20235 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily ISU55_20235 IPR005864 ATP synthase, F0 complex, subunit b, bacterial ISU55_20235 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast ISU55_20240 IPR000711 ATPase, OSCP/delta subunit ISU55_20240 IPR020781 ATPase, OSCP/delta subunit, conserved site ISU55_20240 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily ISU55_20245 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily ISU55_20245 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ISU55_20245 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ISU55_20245 IPR005294 ATP synthase, F1 complex, alpha subunit ISU55_20245 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_20245 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain ISU55_20245 IPR000793 ATP synthase, alpha subunit, C-terminal ISU55_20245 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain ISU55_20245 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily ISU55_20245 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily ISU55_20250 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site ISU55_20250 IPR000131 ATP synthase, F1 complex, gamma subunit ISU55_20250 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily ISU55_20255 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_20255 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ISU55_20255 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily ISU55_20255 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain ISU55_20255 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal ISU55_20255 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ISU55_20255 IPR005722 ATP synthase, F1 complex, beta subunit ISU55_20255 IPR003593 AAA+ ATPase domain ISU55_20260 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal ISU55_20260 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal ISU55_20260 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain ISU55_20260 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit ISU55_20260 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily ISU55_20265 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase ISU55_20265 IPR001451 Hexapeptide repeat ISU55_20265 IPR011004 Trimeric LpxA-like superfamily ISU55_20265 IPR029044 Nucleotide-diphospho-sugar transferases ISU55_20265 IPR018357 Hexapeptide transferase, conserved site ISU55_20265 IPR038009 GlmU, C-terminal LbH domain ISU55_20265 IPR025877 MobA-like NTP transferase ISU55_20270 IPR017932 Glutamine amidotransferase type 2 domain ISU55_20270 IPR001347 Sugar isomerase (SIS) ISU55_20270 IPR029055 Nucleophile aminohydrolases, N-terminal ISU55_20270 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising ISU55_20270 IPR035490 GlmS/FrlB, SIS domain 2 ISU55_20270 IPR035466 GlmS/AgaS, SIS domain 1 ISU55_20275 IPR024370 PBP domain ISU55_20275 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS ISU55_20280 IPR035906 MetI-like superfamily ISU55_20280 IPR011864 Phosphate ABC transporter, permease protein PstC ISU55_20280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_20285 IPR035906 MetI-like superfamily ISU55_20285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_20285 IPR005672 Phosphate transport system permease protein PstA ISU55_20290 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_20290 IPR003593 AAA+ ATPase domain ISU55_20290 IPR003439 ABC transporter-like ISU55_20290 IPR017871 ABC transporter, conserved site ISU55_20290 IPR015850 ABC transporter, phosphate import, PstB ISU55_20290 IPR005670 Phosphate transport system permease protein 1 ISU55_20295 IPR028366 Phosphate transport system protein PhoU ISU55_20295 IPR038078 PhoU-like domain superfamily ISU55_20295 IPR026022 PhoU domain ISU55_20305 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ISU55_20305 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter ISU55_20305 IPR001320 Ionotropic glutamate receptor ISU55_20305 IPR018313 Solute-binding protein family 3, conserved site ISU55_20310 IPR035906 MetI-like superfamily ISU55_20310 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_20310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_20315 IPR035906 MetI-like superfamily ISU55_20315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ISU55_20315 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ISU55_20320 IPR006439 HAD hydrolase, subfamily IA ISU55_20320 IPR036412 HAD-like superfamily ISU55_20320 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ISU55_20320 IPR041492 Haloacid dehalogenase-like hydrolase ISU55_20320 IPR023214 HAD superfamily ISU55_20330 IPR026033 Azaguanine-like transporters ISU55_20330 IPR006043 Xanthine/uracil/vitamin C permease ISU55_20350 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative ISU55_20350 IPR024906 Enoyl reductase FAD binding domain ISU55_20350 IPR010758 Trans-2-enoyl-CoA reductase ISU55_20355 IPR027417 P-loop containing nucleoside triphosphate hydrolase ISU55_20355 IPR025867 MnmE, helical domain ISU55_20355 IPR027368 tRNA modification GTPase MnmE domain 2 ISU55_20355 IPR004520 tRNA modification GTPase MnmE ISU55_20355 IPR006073 GTP binding domain ISU55_20355 IPR005225 Small GTP-binding protein domain ISU55_20355 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 ISU55_20355 IPR018948 GTP-binding protein TrmE, N-terminal ISU55_20355 IPR031168 TrmE-type guanine nucleotide-binding domain ISU55_20360 IPR019998 Membrane insertase YidC ISU55_20360 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 ISU55_20360 IPR038210 Membrane insertase YidC, periplasmic domain ISU55_20360 IPR038221 YidC, periplasmic domain superfamily ISU55_20360 IPR028053 Membrane insertase YidC, N-terminal ISU55_20360 IPR028055 Membrane insertase YidC/Oxa1, C-terminal ISU55_20365 IPR002696 Putative membrane protein insertion efficiency factor ISU55_20370 IPR020539 Ribonuclease P, conserved site ISU55_20370 IPR000100 Ribonuclease P ISU55_20370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ISU55_20370 IPR020568 Ribosomal protein S5 domain 2-type fold ISU55_20375 IPR000271 Ribosomal protein L34 ISU55_20375 IPR020939 Ribosomal protein L34, conserved site