locus-tag class description YPD4_0001 IPR008254 Flavodoxin/nitric oxide synthase YPD4_0001 IPR029039 Flavoprotein-like superfamily YPD4_0002 IPR000485 AsnC-type HTH domain YPD4_0002 IPR011991 ArsR-like helix-turn-helix domain YPD4_0002 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPD4_0002 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPD4_0002 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0002 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0002 IPR019888 Transcription regulator AsnC-type YPD4_0002 IPR011008 Dimeric alpha-beta barrel YPD4_0003 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_0003 IPR004618 Aspartate--ammonia ligase YPD4_0004 IPR036465 von Willebrand factor A-like domain superfamily YPD4_0004 IPR002035 von Willebrand factor, type A YPD4_0004 IPR023481 Uncharacterised protein family ViaA YPD4_0004 IPR008912 Uncharacterised protein family CoxE-like YPD4_0005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0005 IPR022547 ATPase, RavA, C-terminal YPD4_0005 IPR041538 ATPase RavA-like, AAA lid domain YPD4_0005 IPR023671 ATPase RavA YPD4_0005 IPR011704 ATPase, dynein-related, AAA domain YPD4_0005 IPR003593 AAA+ ATPase domain YPD4_0006 IPR023051 Potassium uptake protein, low affinity, Kup YPD4_0006 IPR003855 Potassium transporter YPD4_0007 IPR023064 D-ribose pyranase YPD4_0007 IPR023750 RbsD-like superfamily YPD4_0007 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPD4_0008 IPR029056 Ribokinase-like YPD4_0008 IPR002139 Ribokinase/fructokinase YPD4_0008 IPR011611 Carbohydrate kinase PfkB YPD4_0008 IPR011877 Ribokinase YPD4_0008 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_0009 IPR020846 Major facilitator superfamily domain YPD4_0009 IPR036259 MFS transporter superfamily YPD4_0009 IPR004638 Drug resistance transporter EmrB-like YPD4_0009 IPR011701 Major facilitator superfamily YPD4_0010 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0010 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0010 IPR000524 Transcription regulator HTH, GntR YPD4_0010 IPR008920 Transcription regulator FadR/GntR, C-terminal YPD4_0010 IPR011711 GntR, C-terminal YPD4_0011 IPR001207 Transposase, mutator type YPD4_0012 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0012 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YPD4_0013 IPR013482 Molybdenum cofactor guanylyltransferase YPD4_0013 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_0013 IPR025877 MobA-like NTP transferase YPD4_0014 IPR011009 Protein kinase-like domain superfamily YPD4_0014 IPR002575 Aminoglycoside phosphotransferase YPD4_0014 IPR032882 SrkA/RdoA protein kinase YPD4_0015 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPD4_0015 IPR001853 DSBA-like thioredoxin domain YPD4_0015 IPR013766 Thioredoxin domain YPD4_0015 IPR036249 Thioredoxin-like superfamily YPD4_0015 IPR017937 Thioredoxin, conserved site YPD4_0016 IPR008918 Helix-hairpin-helix motif, class 2 YPD4_0016 IPR012337 Ribonuclease H-like superfamily YPD4_0016 IPR029060 PIN-like domain superfamily YPD4_0016 IPR002298 DNA polymerase A YPD4_0016 IPR018320 DNA polymerase 1 YPD4_0016 IPR020045 DNA polymerase I-like, H3TH domain YPD4_0016 IPR001098 DNA-directed DNA polymerase, family A, palm domain YPD4_0016 IPR019760 DNA-directed DNA polymerase, family A, conserved site YPD4_0016 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPD4_0016 IPR002421 5'-3' exonuclease, N-terminal YPD4_0016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPD4_0016 IPR002562 3'-5' exonuclease domain YPD4_0016 IPR036397 Ribonuclease H superfamily YPD4_0017 IPR036515 Transposase IS200-like superfamily YPD4_0017 IPR002686 Transposase IS200-like YPD4_0018 IPR006073 GTP binding domain YPD4_0018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YPD4_0018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0018 IPR030393 EngB-type guanine nucleotide-binding (G) domain YPD4_0019 IPR007336 Der GTPase activator YPD4_0020 IPR023404 Radical SAM, alpha/beta horseshoe YPD4_0020 IPR007197 Radical SAM YPD4_0020 IPR010723 HemN, C-terminal YPD4_0020 IPR006638 Elp3/MiaB/NifB YPD4_0020 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPD4_0020 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN YPD4_0021 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_0021 IPR025944 Sigma-54 interaction domain, conserved site YPD4_0021 IPR002197 DNA binding HTH domain, Fis-type YPD4_0021 IPR011006 CheY-like superfamily YPD4_0021 IPR010114 DNA-binding transcriptional regulator NtrC YPD4_0021 IPR009057 Homeobox-like domain superfamily YPD4_0021 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPD4_0021 IPR001789 Signal transduction response regulator, receiver domain YPD4_0021 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0021 IPR003593 AAA+ ATPase domain YPD4_0021 IPR002078 RNA polymerase sigma factor 54 interaction domain YPD4_0022 IPR013767 PAS fold YPD4_0022 IPR035965 PAS domain superfamily YPD4_0022 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_0022 IPR005467 Histidine kinase domain YPD4_0022 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_0022 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_0022 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_0022 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_0022 IPR000014 PAS domain YPD4_0023 IPR027303 Glutamine synthetase, glycine-rich site YPD4_0023 IPR036651 Glutamine synthetase, N-terminal domain superfamily YPD4_0023 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPD4_0023 IPR008146 Glutamine synthetase, catalytic domain YPD4_0023 IPR027302 Glutamine synthetase, N-terminal conserved site YPD4_0023 IPR001637 Glutamine synthetase class-I, adenylation site YPD4_0023 IPR004809 Glutamine synthetase type I YPD4_0023 IPR008147 Glutamine synthetase, beta-Grasp domain YPD4_0025 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPD4_0025 IPR036412 HAD-like superfamily YPD4_0025 IPR006439 HAD hydrolase, subfamily IA YPD4_0025 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_0025 IPR023214 HAD superfamily YPD4_0026 IPR023679 Uncharacterised protein family UPF0761, bacterial YPD4_0026 IPR017039 Virulence factor BrkB YPD4_0027 IPR003732 D-aminoacyl-tRNA deacylase DTD YPD4_0027 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily YPD4_0028 IPR003593 AAA+ ATPase domain YPD4_0028 IPR002611 IstB-like ATP-binding protein YPD4_0028 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0028 IPR001270 ClpA/B family YPD4_0028 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0029 IPR017894 HTH domain, IS21 transposase-type YPD4_0029 IPR012337 Ribonuclease H-like superfamily YPD4_0029 IPR006120 Resolvase, HTH domain YPD4_0029 IPR001584 Integrase, catalytic core YPD4_0029 IPR036397 Ribonuclease H superfamily YPD4_0030 IPR016181 Acyl-CoA N-acyltransferase YPD4_0030 IPR000182 GNAT domain YPD4_0030 IPR029069 HotDog domain superfamily YPD4_0030 IPR012660 Thioesterase, putative YPD4_0031 IPR007844 AsmA YPD4_0032 IPR006043 Xanthine/uracil/vitamin C permease YPD4_0032 IPR006042 Xanthine/uracil permease YPD4_0033 IPR006043 Xanthine/uracil/vitamin C permease YPD4_0033 IPR006042 Xanthine/uracil permease YPD4_0034 IPR004445 Sodium/glutamate symport carrier protein GltS YPD4_0035 IPR012340 Nucleic acid-binding, OB-fold YPD4_0035 IPR004609 ATP-dependent DNA helicase RecG YPD4_0035 IPR011545 DEAD/DEAH box helicase domain YPD4_0035 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_0035 IPR033454 RecG, wedge domain YPD4_0035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0035 IPR001650 Helicase, C-terminal YPD4_0036 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YPD4_0036 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPD4_0036 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_0036 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase YPD4_0036 IPR029028 Alpha/beta knot methyltransferases YPD4_0037 IPR004811 RelA/SpoT family YPD4_0037 IPR033655 RelA, TGS domain YPD4_0037 IPR012676 TGS-like YPD4_0037 IPR004095 TGS YPD4_0037 IPR012675 Beta-grasp domain superfamily YPD4_0037 IPR002912 ACT domain YPD4_0037 IPR007685 RelA/SpoT YPD4_0037 IPR003607 HD/PDEase domain YPD4_0038 IPR008144 Guanylate kinase-like domain YPD4_0038 IPR020590 Guanylate kinase, conserved site YPD4_0038 IPR017665 Guanylate kinase YPD4_0038 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPD4_0038 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0039 IPR020923 DNA ligase B YPD4_0039 IPR013839 NAD-dependent DNA ligase, adenylation YPD4_0039 IPR013840 NAD-dependent DNA ligase, N-terminal YPD4_0039 IPR012340 Nucleic acid-binding, OB-fold YPD4_0039 IPR004150 NAD-dependent DNA ligase, OB-fold YPD4_0039 IPR010994 RuvA domain 2-like YPD4_0040 IPR005115 Uncharacterised domain UPF0126 YPD4_0041 IPR005229 Conserved hypothetical protein CHP00255 YPD4_0041 IPR013551 Domain of unknown function DUF1732 YPD4_0041 IPR013527 YicC-like, N-terminal YPD4_0042 IPR036345 Exoribonuclease, PH domain 2 superfamily YPD4_0042 IPR018336 Ribonuclease PH, conserved site YPD4_0042 IPR002381 Ribonuclease PH, bacterial-type YPD4_0042 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0042 IPR027408 PNPase/RNase PH domain superfamily YPD4_0042 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPD4_0042 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPD4_0043 IPR023031 Orotate phosphoribosyltransferase YPD4_0043 IPR004467 Orotate phosphoribosyl transferase domain YPD4_0043 IPR000836 Phosphoribosyltransferase domain YPD4_0043 IPR029057 Phosphoribosyltransferase-like YPD4_0044 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPD4_0044 IPR023769 Nucleoid occlusion factor SlmA YPD4_0044 IPR009057 Homeobox-like domain superfamily YPD4_0044 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPD4_0044 IPR001647 DNA-binding HTH domain, TetR-type YPD4_0045 IPR033704 dUTPase, trimeric YPD4_0045 IPR036157 dUTPase-like superfamily YPD4_0045 IPR029054 dUTPase-like YPD4_0045 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YPD4_0046 IPR036551 Flavin prenyltransferase-like YPD4_0046 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPD4_0046 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPD4_0046 IPR035929 CoaB-like superfamily YPD4_0046 IPR003382 Flavoprotein YPD4_0047 IPR037518 MPN domain YPD4_0047 IPR025657 RadC-like JAB domain YPD4_0047 IPR010994 RuvA domain 2-like YPD4_0047 IPR020891 Uncharacterised protein family UPF0758, conserved site YPD4_0047 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPD4_0047 IPR001405 Uncharacterised protein family UPF0758 YPD4_0048 IPR010979 Ribosomal protein S13-like, H2TH YPD4_0048 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YPD4_0048 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YPD4_0048 IPR020629 Formamidopyrimidine-DNA glycosylase YPD4_0048 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type YPD4_0048 IPR035937 MutM-like, N-terminal YPD4_0048 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain YPD4_0048 IPR010663 Zinc finger, FPG/IleRS-type YPD4_0049 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_0049 IPR004821 Cytidyltransferase-like domain YPD4_0049 IPR001980 Phosphopantetheine adenylyltransferase YPD4_0050 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_0050 IPR001173 Glycosyltransferase 2-like YPD4_0051 IPR039901 3-deoxy-D-manno-octulosonic acid transferase YPD4_0051 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YPD4_0051 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily YPD4_0052 IPR002201 Glycosyl transferase, family 9 YPD4_0052 IPR011908 Lipopolysaccharide heptosyltransferase I YPD4_0053 IPR002201 Glycosyl transferase, family 9 YPD4_0053 IPR011910 ADP-heptose--LPS heptosyltransferase 2 YPD4_0054 IPR001509 NAD-dependent epimerase/dehydratase YPD4_0054 IPR036291 NAD(P)-binding domain superfamily YPD4_0054 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YPD4_0055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0055 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0055 IPR004839 Aminotransferase, class I/classII YPD4_0055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0055 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPD4_0055 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPD4_0056 IPR011032 GroES-like superfamily YPD4_0056 IPR004627 L-threonine 3-dehydrogenase YPD4_0056 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPD4_0056 IPR013154 Alcohol dehydrogenase, N-terminal YPD4_0056 IPR036291 NAD(P)-binding domain superfamily YPD4_0056 IPR020843 Polyketide synthase, enoylreductase domain YPD4_0056 IPR013149 Alcohol dehydrogenase, C-terminal YPD4_0057 IPR006837 Divergent polysaccharide deacetylase YPD4_0057 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_0058 IPR006837 Divergent polysaccharide deacetylase YPD4_0058 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_0059 IPR011055 Duplicated hybrid motif YPD4_0059 IPR016047 Peptidase M23 YPD4_0060 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_0060 IPR011258 BPG-independent PGAM, N-terminal YPD4_0060 IPR006124 Metalloenzyme YPD4_0060 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily YPD4_0060 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YPD4_0061 IPR001763 Rhodanese-like domain YPD4_0061 IPR036873 Rhodanese-like domain superfamily YPD4_0062 IPR035958 SecB-like superfamily YPD4_0062 IPR003708 Bacterial protein export chaperone SecB YPD4_0063 IPR036291 NAD(P)-binding domain superfamily YPD4_0063 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YPD4_0063 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YPD4_0063 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YPD4_0063 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_0063 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_0064 IPR010493 Serine acetyltransferase, N-terminal YPD4_0064 IPR042122 Serine acetyltransferase, N-terminal domain superfamily YPD4_0064 IPR005881 Serine O-acetyltransferase YPD4_0064 IPR001451 Hexapeptide repeat YPD4_0064 IPR018357 Hexapeptide transferase, conserved site YPD4_0064 IPR011004 Trimeric LpxA-like superfamily YPD4_0065 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YPD4_0065 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPD4_0065 IPR029028 Alpha/beta knot methyltransferases YPD4_0065 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_0066 IPR009057 Homeobox-like domain superfamily YPD4_0066 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPD4_0066 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPD4_0066 IPR004026 Ada DNA repair, metal-binding YPD4_0066 IPR035451 Ada-like domain superfamily YPD4_0066 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPD4_0066 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPD4_0066 IPR018062 HTH domain AraC-type, conserved site YPD4_0066 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPD4_0066 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0066 IPR018060 DNA binding HTH domain, AraC-type YPD4_0066 IPR016221 Bifunctional regulatory protein Ada YPD4_0067 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_0067 IPR005467 Histidine kinase domain YPD4_0067 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPD4_0067 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_0067 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_0067 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_0067 IPR003660 HAMP domain YPD4_0067 IPR038515 CpxA, periplasmic domain superfamily YPD4_0067 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_0068 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0068 IPR039420 Transcriptional regulatory protein WalR-like YPD4_0068 IPR001789 Signal transduction response regulator, receiver domain YPD4_0068 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_0068 IPR011006 CheY-like superfamily YPD4_0069 IPR012899 LTXXQ motif family protein YPD4_0070 IPR006842 Transposase (putative), YhgA-like YPD4_0070 IPR010106 Recombination-promoting nuclease RpnA YPD4_0071 IPR023783 Cation efflux pump FieF YPD4_0071 IPR027470 Cation efflux protein, cytoplasmic domain YPD4_0071 IPR027469 Cation efflux transmembrane domain superfamily YPD4_0071 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPD4_0071 IPR002524 Cation efflux protein YPD4_0072 IPR035966 Phosphofructokinase superfamily YPD4_0072 IPR022953 ATP-dependent 6-phosphofructokinase YPD4_0072 IPR000023 Phosphofructokinase domain YPD4_0072 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic YPD4_0072 IPR015912 Phosphofructokinase, conserved site YPD4_0072 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type YPD4_0073 IPR005669 Thiosulphate/Sulfate-binding protein YPD4_0073 IPR000957 Sulphate/thiosulphate-binding, conserved site YPD4_0073 IPR034408 Sulphate/thiosulphate-binding site YPD4_0075 IPR001898 Solute carrier family 13 YPD4_0075 IPR030676 Citrate carrier CitT-related YPD4_0076 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPD4_0076 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPD4_0076 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YPD4_0077 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPD4_0077 IPR024078 Putative deacetylase LmbE-like domain superfamily YPD4_0078 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0078 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0078 IPR000847 Transcription regulator HTH, LysR YPD4_0078 IPR005119 LysR, substrate-binding YPD4_0079 IPR013785 Aldolase-type TIM barrel YPD4_0079 IPR035990 Triosephosphate isomerase superfamily YPD4_0079 IPR020861 Triosephosphate isomerase, active site YPD4_0079 IPR000652 Triosephosphate isomerase YPD4_0079 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YPD4_0080 IPR009918 Protein of unknown function DUF1454 YPD4_0081 IPR008523 Protein of unknown function DUF805 YPD4_0082 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_0082 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_0082 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPD4_0082 IPR033892 Ferredoxin--NADP reductase, bacteria YPD4_0082 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_0082 IPR017938 Riboflavin synthase-like beta-barrel YPD4_0083 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YPD4_0084 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_0084 IPR005999 Glycerol kinase YPD4_0084 IPR018483 Carbohydrate kinase, FGGY, conserved site YPD4_0084 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_0084 IPR000577 Carbohydrate kinase, FGGY YPD4_0085 IPR022357 Major intrinsic protein, conserved site YPD4_0085 IPR023271 Aquaporin-like YPD4_0085 IPR000425 Major intrinsic protein YPD4_0087 IPR017871 ABC transporter, conserved site YPD4_0087 IPR003593 AAA+ ATPase domain YPD4_0087 IPR011527 ABC transporter type 1, transmembrane domain YPD4_0087 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_0087 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0087 IPR033838 Colicin V processing peptidase YPD4_0087 IPR005074 Peptidase C39, bacteriocin processing YPD4_0087 IPR039421 Type I protein exporter YPD4_0087 IPR003439 ABC transporter-like YPD4_0088 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_0088 IPR006144 Secretion protein HlyD, conserved site YPD4_0090 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPD4_0090 IPR010203 Regulator of ribonuclease activity A YPD4_0090 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YPD4_0090 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPD4_0091 IPR026046 UbiA prenyltransferase domain containing protein 1 YPD4_0091 IPR000537 UbiA prenyltransferase family YPD4_0091 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPD4_0092 IPR003959 ATPase, AAA-type, core YPD4_0092 IPR004491 Heat shock protein HslU YPD4_0092 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0092 IPR003593 AAA+ ATPase domain YPD4_0092 IPR019489 Clp ATPase, C-terminal YPD4_0093 IPR023333 Proteasome B-type subunit YPD4_0093 IPR001353 Proteasome, subunit alpha/beta YPD4_0093 IPR029055 Nucleophile aminohydrolases, N-terminal YPD4_0093 IPR022281 ATP-dependent protease, HslV subunit YPD4_0094 IPR007730 Sporulation-like domain YPD4_0094 IPR036680 Sporulation-like domain superfamily YPD4_0094 IPR011930 Cell division protein FtsN YPD4_0095 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0095 IPR000843 LacI-type HTH domain YPD4_0095 IPR028082 Periplasmic binding protein-like I YPD4_0096 IPR005259 Primosomal protein N' YPD4_0096 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0096 IPR001650 Helicase, C-terminal YPD4_0096 IPR011545 DEAD/DEAH box helicase domain YPD4_0096 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain YPD4_0096 IPR041236 Primosomal protein N, C-terminal domain YPD4_0096 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily YPD4_0096 IPR041222 Primosomal protein N', 3' DNA-binding domain YPD4_0096 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_0097 IPR038972 Inner membrane protein YiaA-like YPD4_0097 IPR008024 YiaAB two helix YPD4_0098 IPR023453 Methionine repressor MetJ domain superfamily YPD4_0098 IPR010985 Ribbon-helix-helix YPD4_0098 IPR002084 Methionine repressor MetJ YPD4_0099 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPD4_0099 IPR011821 O-succinylhomoserine (thiol)-lyase YPD4_0099 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0099 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0099 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0100 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPD4_0100 IPR019811 Homoserine dehydrogenase, conserved site YPD4_0100 IPR001342 Homoserine dehydrogenase, catalytic YPD4_0100 IPR036393 Acetylglutamate kinase-like superfamily YPD4_0100 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPD4_0100 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_0100 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPD4_0100 IPR001341 Aspartate kinase YPD4_0100 IPR018042 Aspartate kinase, conserved site YPD4_0100 IPR036291 NAD(P)-binding domain superfamily YPD4_0101 IPR029041 FAD-linked oxidoreductase-like YPD4_0101 IPR003171 Methylenetetrahydrofolate reductase YPD4_0101 IPR004620 5,10-methylenetetrahydrofolate reductase YPD4_0102 IPR036397 Ribonuclease H superfamily YPD4_0102 IPR025948 HTH-like domain YPD4_0102 IPR038965 Transposase InsF-like YPD4_0102 IPR001584 Integrase, catalytic core YPD4_0102 IPR012337 Ribonuclease H-like superfamily YPD4_0104 IPR014036 DeoR C-terminal sensor domain YPD4_0104 IPR001034 DeoR-type HTH domain YPD4_0104 IPR037171 NagB/RpiA transferase-like YPD4_0104 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPD4_0104 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0104 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0105 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YPD4_0105 IPR038236 GlpG peptidase, N-terminal domain superfamily YPD4_0105 IPR022764 Peptidase S54, rhomboid domain YPD4_0105 IPR035952 Rhomboid-like superfamily YPD4_0105 IPR023662 Rhomboid protease GlpG YPD4_0106 IPR001763 Rhodanese-like domain YPD4_0106 IPR036873 Rhodanese-like domain superfamily YPD4_0106 IPR023695 Thiosulfate sulfurtransferase, bacterial YPD4_0107 IPR000792 Transcription regulator LuxR, C-terminal YPD4_0107 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0107 IPR023768 Transcriptional regulator HTH-type, MalT YPD4_0107 IPR041617 MalT-like TPR region YPD4_0107 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_0107 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_0107 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0108 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPD4_0108 IPR000811 Glycosyl transferase, family 35 YPD4_0108 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPD4_0109 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPD4_0109 IPR000811 Glycosyl transferase, family 35 YPD4_0109 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPD4_0110 IPR003385 Glycoside hydrolase, family 77 YPD4_0110 IPR017853 Glycoside hydrolase superfamily YPD4_0111 IPR017726 Fe/S biogenesis protein NfuA YPD4_0111 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YPD4_0111 IPR035903 HesB-like domain superfamily YPD4_0111 IPR034904 Fe-S cluster assembly domain superfamily YPD4_0111 IPR000361 FeS cluster biogenesis YPD4_0112 IPR029057 Phosphoribosyltransferase-like YPD4_0112 IPR000836 Phosphoribosyltransferase domain YPD4_0112 IPR005222 Competence protein ComF YPD4_0113 IPR029058 Alpha/Beta hydrolase fold YPD4_0113 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase YPD4_0113 IPR000073 Alpha/beta hydrolase fold-1 YPD4_0114 IPR011640 Ferrous iron transport protein B, C-terminal YPD4_0114 IPR041069 FeoB, cytosolic helical domain YPD4_0114 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0114 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPD4_0114 IPR005225 Small GTP-binding protein domain YPD4_0114 IPR030389 FeoB-type guanine nucleotide-binding (G) domain YPD4_0114 IPR003373 Ferrous iron transport protein B YPD4_0115 IPR010994 RuvA domain 2-like YPD4_0115 IPR023319 Tex-like protein, HTH domain superfamily YPD4_0115 IPR012340 Nucleic acid-binding, OB-fold YPD4_0115 IPR018974 Tex-like protein, N-terminal YPD4_0115 IPR037027 YqgF/RNase H-like domain superfamily YPD4_0115 IPR023323 Tex-like domain superfamily YPD4_0115 IPR003029 S1 domain YPD4_0115 IPR022967 RNA-binding domain, S1 YPD4_0115 IPR012337 Ribonuclease H-like superfamily YPD4_0115 IPR032639 Tex protein, YqgF-like domain YPD4_0115 IPR041692 HHH domain 9 YPD4_0115 IPR006641 YqgF/RNase H-like domain YPD4_0116 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPD4_0116 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPD4_0116 IPR023459 Transcription elongation factor GreA/GreB family YPD4_0116 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPD4_0116 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPD4_0116 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPD4_0116 IPR006358 Transcription elongation factor GreB YPD4_0116 IPR028624 Transcription elongation factor GreA/GreB YPD4_0117 IPR001789 Signal transduction response regulator, receiver domain YPD4_0117 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_0117 IPR039420 Transcriptional regulatory protein WalR-like YPD4_0117 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_0117 IPR011006 CheY-like superfamily YPD4_0117 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0118 IPR003660 HAMP domain YPD4_0118 IPR005467 Histidine kinase domain YPD4_0118 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_0118 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_0118 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_0118 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_0118 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_0119 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YPD4_0119 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YPD4_0119 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YPD4_0119 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YPD4_0120 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily YPD4_0120 IPR016154 Heat shock protein Hsp33, C-terminal YPD4_0120 IPR000397 Heat shock protein Hsp33 YPD4_0120 IPR016153 Heat shock protein Hsp33, N-terminal YPD4_0121 IPR025708 Heat shock protein 15 YPD4_0121 IPR002942 RNA-binding S4 domain YPD4_0121 IPR036986 RNA-binding S4 domain superfamily YPD4_0122 IPR006439 HAD hydrolase, subfamily IA YPD4_0122 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_0122 IPR023214 HAD superfamily YPD4_0122 IPR036412 HAD-like superfamily YPD4_0123 IPR010771 Intracellular growth attenuator IgaA YPD4_0124 IPR020084 NUDIX hydrolase, conserved site YPD4_0124 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_0124 IPR000086 NUDIX hydrolase domain YPD4_0125 IPR012338 Beta-lactamase/transpeptidase-like YPD4_0125 IPR001264 Glycosyl transferase, family 51 YPD4_0125 IPR023346 Lysozyme-like domain superfamily YPD4_0125 IPR036950 Penicillin binding protein transglycosylase domain YPD4_0125 IPR031376 Penicillin-binding protein, OB-like domain YPD4_0125 IPR001460 Penicillin-binding protein, transpeptidase YPD4_0130 IPR001775 GspD/PilQ family YPD4_0130 IPR004846 Type II/III secretion system YPD4_0130 IPR011662 Secretin/TonB, short N-terminal domain YPD4_0130 IPR004845 Type II secretion system GspD, conserved site YPD4_0130 IPR013355 Type IV pilus secretin PilQ YPD4_0130 IPR038591 NolW-like superfamily YPD4_0130 IPR005644 NolW-like YPD4_0131 IPR004845 Type II secretion system GspD, conserved site YPD4_0131 IPR004846 Type II/III secretion system YPD4_0131 IPR011662 Secretin/TonB, short N-terminal domain YPD4_0131 IPR013355 Type IV pilus secretin PilQ YPD4_0131 IPR001775 GspD/PilQ family YPD4_0131 IPR038591 NolW-like superfamily YPD4_0131 IPR005644 NolW-like YPD4_0132 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0132 IPR023000 Shikimate kinase, conserved site YPD4_0132 IPR031322 Shikimate kinase/gluconokinase YPD4_0132 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPD4_0133 IPR030963 3-dehydroquinate synthase family YPD4_0133 IPR030960 3-dehydroquinate synthase domain YPD4_0133 IPR016037 3-dehydroquinate synthase AroB YPD4_0134 IPR007730 Sporulation-like domain YPD4_0134 IPR036680 Sporulation-like domain superfamily YPD4_0135 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPD4_0135 IPR012263 Adenine modification methylase, M.EcoRV-type YPD4_0135 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_0135 IPR023095 Adenine-specific methyltransferase, domain 2 YPD4_0135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0136 IPR026019 Ribulose-phosphate 3-epimerase YPD4_0136 IPR000056 Ribulose-phosphate 3-epimerase-like YPD4_0136 IPR013785 Aldolase-type TIM barrel YPD4_0136 IPR011060 Ribulose-phosphate binding barrel YPD4_0137 IPR036412 HAD-like superfamily YPD4_0137 IPR037512 Phosphoglycolate phosphatase, prokaryotic YPD4_0137 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic YPD4_0137 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPD4_0137 IPR023214 HAD superfamily YPD4_0137 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_0137 IPR006439 HAD hydrolase, subfamily IA YPD4_0138 IPR024109 Tryptophan-tRNA ligase, bacterial-type YPD4_0138 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPD4_0138 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_0138 IPR002306 Tryptophan-tRNA ligase YPD4_0138 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_0139 IPR028281 Siroheme synthase, central domain YPD4_0139 IPR014776 Tetrapyrrole methylase, subdomain 2 YPD4_0139 IPR014777 Tetrapyrrole methylase, subdomain 1 YPD4_0139 IPR000878 Tetrapyrrole methylase YPD4_0139 IPR006366 Uroporphyrin-III C-methyltransferase YPD4_0139 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPD4_0139 IPR006367 Sirohaem synthase, N-terminal YPD4_0139 IPR036291 NAD(P)-binding domain superfamily YPD4_0139 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPD4_0139 IPR012409 Sirohaem synthase YPD4_0139 IPR035996 Tetrapyrrole methylase superfamily YPD4_0139 IPR019478 Sirohaem synthase, dimerisation domain YPD4_0140 IPR024002 Formate/nitrite transporter, conserved site YPD4_0140 IPR000292 Formate/nitrite transporter YPD4_0140 IPR023271 Aquaporin-like YPD4_0141 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPD4_0141 IPR017881 Nitrite reductase (NADH) small subunit YPD4_0141 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type YPD4_0142 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPD4_0142 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPD4_0142 IPR023753 FAD/NAD(P)-binding domain YPD4_0142 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPD4_0142 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPD4_0142 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YPD4_0142 IPR007419 BFD-like [2Fe-2S]-binding domain YPD4_0142 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0142 IPR017121 Nitrite reductase [NAD(P)H], large subunit YPD4_0142 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal YPD4_0142 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPD4_0143 IPR032466 Metal-dependent hydrolase YPD4_0143 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPD4_0143 IPR013108 Amidohydrolase 3 YPD4_0144 IPR020846 Major facilitator superfamily domain YPD4_0144 IPR011701 Major facilitator superfamily YPD4_0144 IPR023528 Major facilitator superfamily transporter, TsgA YPD4_0144 IPR036259 MFS transporter superfamily YPD4_0146 IPR000843 LacI-type HTH domain YPD4_0146 IPR028082 Periplasmic binding protein-like I YPD4_0146 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0147 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPD4_0147 IPR019802 Glycoside hydrolase, family 4, conserved site YPD4_0147 IPR001088 Glycoside hydrolase, family 4 YPD4_0147 IPR036291 NAD(P)-binding domain superfamily YPD4_0147 IPR022616 Glycosyl hydrolase, family 4, C-terminal YPD4_0148 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPD4_0148 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPD4_0148 IPR029000 Cyclophilin-like domain superfamily YPD4_0149 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0149 IPR033186 Helicase HerA-like C-terminal YPD4_0150 IPR017926 Glutamine amidotransferase YPD4_0150 IPR029062 Class I glutamine amidotransferase-like YPD4_0150 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPD4_0151 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0151 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0151 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0151 IPR005814 Aminotransferase class-III YPD4_0151 IPR004636 Acetylornithine/Succinylornithine transaminase family YPD4_0151 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPD4_0152 IPR032692 Integral membrane protein YccS, N-terminal YPD4_0152 IPR010020 Integral membrane protein, YccS/YhfK YPD4_0153 IPR018488 Cyclic nucleotide-binding, conserved site YPD4_0153 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0153 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0153 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPD4_0153 IPR014710 RmlC-like jelly roll fold YPD4_0153 IPR012318 Crp-type HTH domain YPD4_0153 IPR000595 Cyclic nucleotide-binding domain YPD4_0153 IPR018490 Cyclic nucleotide-binding-like YPD4_0154 IPR003718 OsmC/Ohr family YPD4_0154 IPR015946 K homology domain-like, alpha/beta YPD4_0154 IPR036102 OsmC/Ohr superfamily YPD4_0156 IPR006083 Phosphoribulokinase/uridine kinase YPD4_0156 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0156 IPR006082 Phosphoribulokinase YPD4_0157 IPR000073 Alpha/beta hydrolase fold-1 YPD4_0157 IPR000952 AB hydrolase 4, conserved site YPD4_0157 IPR012020 AB hydrolase 4 family YPD4_0157 IPR029058 Alpha/Beta hydrolase fold YPD4_0158 IPR001123 Amino acid exporter protein, LeuE-type YPD4_0159 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_0159 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPD4_0159 IPR010068 Taurine ABC transporter, substrate-binding protein TauA YPD4_0160 IPR015859 ABC transporter, taurine import, TauD YPD4_0160 IPR017871 ABC transporter, conserved site YPD4_0160 IPR003439 ABC transporter-like YPD4_0160 IPR003593 AAA+ ATPase domain YPD4_0160 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0161 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0161 IPR035906 MetI-like superfamily YPD4_0162 IPR003819 TauD/TfdA-like domain YPD4_0162 IPR042098 Taurine dioxygenase TauD-like superfamily YPD4_0164 IPR001173 Glycosyltransferase 2-like YPD4_0164 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_0165 IPR003593 AAA+ ATPase domain YPD4_0165 IPR032781 ABC-transporter extension domain YPD4_0165 IPR003439 ABC transporter-like YPD4_0165 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0165 IPR017871 ABC transporter, conserved site YPD4_0166 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0166 IPR017871 ABC transporter, conserved site YPD4_0166 IPR003593 AAA+ ATPase domain YPD4_0166 IPR032781 ABC-transporter extension domain YPD4_0166 IPR003439 ABC transporter-like YPD4_0167 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YPD4_0167 IPR029039 Flavoprotein-like superfamily YPD4_0167 IPR003680 Flavodoxin-like fold YPD4_0168 IPR004771 K+/H+ exchanger YPD4_0168 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YPD4_0168 IPR038770 Sodium/solute symporter superfamily YPD4_0168 IPR003148 Regulator of K+ conductance, N-terminal YPD4_0168 IPR006153 Cation/H+ exchanger YPD4_0168 IPR036291 NAD(P)-binding domain superfamily YPD4_0169 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPD4_0170 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPD4_0170 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPD4_0170 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPD4_0171 IPR039445 Transcriptional regulator DauR-like, HTH domain YPD4_0171 IPR013559 YheO-like YPD4_0171 IPR039446 Transcriptional regulator DauR-like YPD4_0172 IPR017463 Sulphur relay, TusD/DsrE YPD4_0172 IPR003787 Sulphur relay, DsrE/F-like protein YPD4_0172 IPR027396 DsrEFH-like YPD4_0173 IPR017462 Sulphur relay, TusC/DsrF YPD4_0173 IPR027396 DsrEFH-like YPD4_0173 IPR003787 Sulphur relay, DsrE/F-like protein YPD4_0173 IPR037450 Sulphur relay, TusC YPD4_0174 IPR012340 Nucleic acid-binding, OB-fold YPD4_0174 IPR006032 Ribosomal protein S12/S23 YPD4_0174 IPR005679 Ribosomal protein S12, bacterial-type YPD4_0175 IPR023798 Ribosomal protein S7 domain YPD4_0175 IPR036823 Ribosomal protein S7 domain superfamily YPD4_0175 IPR020606 Ribosomal protein S7, conserved site YPD4_0175 IPR005717 Ribosomal protein S7, bacterial/organellar-type YPD4_0175 IPR000235 Ribosomal protein S5/S7 YPD4_0176 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0176 IPR005517 Translation elongation factor EFG/EF2, domain IV YPD4_0176 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_0176 IPR005225 Small GTP-binding protein domain YPD4_0176 IPR000795 Transcription factor, GTP-binding domain YPD4_0176 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_0176 IPR041095 Elongation Factor G, domain II YPD4_0176 IPR009022 Elongation factor G, domain III YPD4_0176 IPR004540 Translation elongation factor EFG/EF2 YPD4_0176 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0176 IPR031157 Tr-type G domain, conserved site YPD4_0176 IPR035647 EF-G domain III/V-like YPD4_0176 IPR035649 EFG, domain V YPD4_0176 IPR000640 Elongation factor EFG, domain V-like YPD4_0176 IPR004161 Translation elongation factor EFTu-like, domain 2 YPD4_0177 IPR004161 Translation elongation factor EFTu-like, domain 2 YPD4_0177 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPD4_0177 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_0177 IPR000795 Transcription factor, GTP-binding domain YPD4_0177 IPR005225 Small GTP-binding protein domain YPD4_0177 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0177 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPD4_0177 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPD4_0177 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPD4_0177 IPR031157 Tr-type G domain, conserved site YPD4_0177 IPR033720 Elongation factor Tu, domain 2 YPD4_0178 IPR036515 Transposase IS200-like superfamily YPD4_0178 IPR002686 Transposase IS200-like YPD4_0179 IPR002024 Bacterioferritin YPD4_0179 IPR009078 Ferritin-like superfamily YPD4_0179 IPR008331 Ferritin/DPS protein domain YPD4_0179 IPR009040 Ferritin-like diiron domain YPD4_0179 IPR012347 Ferritin-like YPD4_0180 IPR027486 Ribosomal protein S10 domain YPD4_0180 IPR018268 Ribosomal protein S10, conserved site YPD4_0180 IPR036838 Ribosomal protein S10 domain superfamily YPD4_0180 IPR001848 Ribosomal protein S10 YPD4_0181 IPR019927 Ribosomal protein L3, bacterial/organelle-type YPD4_0181 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_0181 IPR019926 Ribosomal protein L3, conserved site YPD4_0181 IPR000597 Ribosomal protein L3 YPD4_0182 IPR002136 Ribosomal protein L4/L1e YPD4_0182 IPR023574 Ribosomal protein L4 domain superfamily YPD4_0182 IPR013005 50S ribosomal protein uL4 YPD4_0183 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPD4_0183 IPR001014 Ribosomal protein L23/L25, conserved site YPD4_0183 IPR013025 Ribosomal protein L25/L23 YPD4_0183 IPR012678 Ribosomal protein L23/L15e core domain superfamily YPD4_0184 IPR022666 Ribosomal Proteins L2, RNA binding domain YPD4_0184 IPR002171 Ribosomal protein L2 YPD4_0184 IPR005880 Ribosomal protein L2, bacterial/organellar-type YPD4_0184 IPR022669 Ribosomal protein L2, C-terminal YPD4_0184 IPR022671 Ribosomal protein L2, conserved site YPD4_0184 IPR014726 Ribosomal protein L2, domain 3 YPD4_0184 IPR008991 Translation protein SH3-like domain superfamily YPD4_0184 IPR012340 Nucleic acid-binding, OB-fold YPD4_0184 IPR014722 Ribosomal protein L2, domain 2 YPD4_0185 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YPD4_0185 IPR036394 Ribosomal protein L22/L17 superfamily YPD4_0185 IPR018260 Ribosomal protein L22/L17, conserved site YPD4_0185 IPR001063 Ribosomal protein L22/L17 YPD4_0186 IPR004087 K Homology domain YPD4_0186 IPR015946 K homology domain-like, alpha/beta YPD4_0186 IPR004044 K Homology domain, type 2 YPD4_0186 IPR009019 K homology domain superfamily, prokaryotic type YPD4_0186 IPR005704 Ribosomal protein S3, bacterial-type YPD4_0186 IPR001351 Ribosomal protein S3, C-terminal YPD4_0186 IPR036419 Ribosomal protein S3, C-terminal domain superfamily YPD4_0186 IPR018280 Ribosomal protein S3, conserved site YPD4_0187 IPR016180 Ribosomal protein L10e/L16 YPD4_0187 IPR036920 Ribosomal protein L10e/L16 superfamily YPD4_0187 IPR000114 Ribosomal protein L16 YPD4_0187 IPR020798 Ribosomal protein L16, conserved site YPD4_0188 IPR019972 Ribosomal protein L14P, conserved site YPD4_0188 IPR036853 Ribosomal protein L14 superfamily YPD4_0188 IPR000218 Ribosomal protein L14P YPD4_0188 IPR005745 Ribosomal protein L14P, bacterial-type YPD4_0189 IPR008991 Translation protein SH3-like domain superfamily YPD4_0189 IPR041988 Ribosomal Protein L26/L24, KOW domain YPD4_0189 IPR014722 Ribosomal protein L2, domain 2 YPD4_0189 IPR003256 Ribosomal protein L24 YPD4_0189 IPR005824 KOW YPD4_0189 IPR005825 Ribosomal protein L24/L26, conserved site YPD4_0190 IPR002132 Ribosomal protein L5 YPD4_0190 IPR020930 Ribosomal protein L5, bacterial-type YPD4_0190 IPR031309 Ribosomal protein L5, C-terminal YPD4_0190 IPR022803 Ribosomal protein L5 domain superfamily YPD4_0190 IPR031310 Ribosomal protein L5, N-terminal YPD4_0191 IPR023036 Ribosomal protein S14, bacterial/plastid YPD4_0191 IPR018271 Ribosomal protein S14, conserved site YPD4_0191 IPR001209 Ribosomal protein S14 YPD4_0192 IPR000630 Ribosomal protein S8 YPD4_0192 IPR035987 Ribosomal protein S8 superfamily YPD4_0193 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily YPD4_0193 IPR002358 Ribosomal protein L6, conserved site YPD4_0193 IPR019906 Ribosomal protein L6, bacterial-type YPD4_0193 IPR020040 Ribosomal protein L6, alpha-beta domain YPD4_0193 IPR000702 Ribosomal protein L6 YPD4_0194 IPR005484 Ribosomal protein L18 YPD4_0194 IPR004389 Ribosomal protein L18, bacterial-type YPD4_0195 IPR013810 Ribosomal protein S5, N-terminal YPD4_0195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_0195 IPR000851 Ribosomal protein S5 YPD4_0195 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0195 IPR005324 Ribosomal protein S5, C-terminal YPD4_0195 IPR005712 Ribosomal protein S5, bacterial-type YPD4_0195 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPD4_0196 IPR036227 Ribosomal L18e/L15P superfamily YPD4_0196 IPR030878 Ribosomal protein L15 YPD4_0196 IPR001196 Ribosomal protein L15, conserved site YPD4_0196 IPR021131 Ribosomal protein L18e/L15P YPD4_0196 IPR005749 Ribosomal protein L15, bacterial-type YPD4_0197 IPR023201 SecY domain superfamily YPD4_0197 IPR002208 SecY/SEC61-alpha family YPD4_0197 IPR026593 Protein translocase subunit SecY YPD4_0197 IPR030659 SecY conserved site YPD4_0198 IPR001892 Ribosomal protein S13 YPD4_0198 IPR019980 Ribosomal protein S13, bacterial-type YPD4_0198 IPR018269 Ribosomal protein S13, conserved site YPD4_0198 IPR010979 Ribosomal protein S13-like, H2TH YPD4_0198 IPR027437 30s ribosomal protein S13, C-terminal YPD4_0199 IPR018102 Ribosomal S11, conserved site YPD4_0199 IPR001971 Ribosomal protein S11 YPD4_0199 IPR019981 Ribosomal protein S11, bacterial-type YPD4_0199 IPR036967 Ribosomal protein S11 superfamily YPD4_0200 IPR022801 Ribosomal protein S4/S9 YPD4_0200 IPR036986 RNA-binding S4 domain superfamily YPD4_0200 IPR001912 Ribosomal protein S4/S9, N-terminal YPD4_0200 IPR002942 RNA-binding S4 domain YPD4_0200 IPR018079 Ribosomal protein S4, conserved site YPD4_0200 IPR005709 Ribosomal protein S4, bacterial-type YPD4_0201 IPR011262 DNA-directed RNA polymerase, insert domain YPD4_0201 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YPD4_0201 IPR011773 DNA-directed RNA polymerase, alpha subunit YPD4_0201 IPR036643 DNA-directed RNA polymerase, insert domain superfamily YPD4_0201 IPR011260 RNA polymerase, alpha subunit, C-terminal YPD4_0201 IPR036603 RNA polymerase, RBP11-like subunit YPD4_0202 IPR036373 Ribosomal protein L17 superfamily YPD4_0202 IPR000456 Ribosomal protein L17 YPD4_0203 IPR000551 MerR-type HTH domain YPD4_0203 IPR009061 Putative DNA-binding domain superfamily YPD4_0203 IPR011788 Zn(II)-responsive transcriptional regulator YPD4_0204 IPR036019 Gated mechanosensitive channel YPD4_0204 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L YPD4_0204 IPR001185 Large-conductance mechanosensitive channel YPD4_0204 IPR019823 Large-conductance mechanosensitive channel, conserved site YPD4_0205 IPR003148 Regulator of K+ conductance, N-terminal YPD4_0205 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPD4_0205 IPR006037 Regulator of K+ conductance, C-terminal YPD4_0205 IPR006036 Potassium uptake protein TrkA YPD4_0205 IPR036291 NAD(P)-binding domain superfamily YPD4_0206 IPR023267 RNA (C5-cytosine) methyltransferase YPD4_0206 IPR004573 rRNA small subunit methyltransferase B YPD4_0206 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YPD4_0206 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YPD4_0206 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type YPD4_0206 IPR035926 NusB-like superfamily YPD4_0206 IPR006027 NusB/RsmB/TIM44 YPD4_0206 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0207 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain YPD4_0207 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPD4_0207 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPD4_0207 IPR036477 Formyl transferase, N-terminal domain superfamily YPD4_0207 IPR037022 Formyl transferase, C-terminal domain superfamily YPD4_0207 IPR005794 Methionyl-tRNA formyltransferase YPD4_0207 IPR005793 Formyl transferase, C-terminal YPD4_0207 IPR002376 Formyl transferase, N-terminal YPD4_0208 IPR023635 Peptide deformylase YPD4_0208 IPR036821 Peptide deformylase superfamily YPD4_0209 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0209 IPR041614 DprA, winged helix domain YPD4_0209 IPR003488 DNA recombination-mediator protein A YPD4_0210 IPR007456 Smg YPD4_0211 IPR013498 DNA topoisomerase, type IA, zn finger YPD4_0211 IPR000380 DNA topoisomerase, type IA YPD4_0212 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPD4_0212 IPR023535 Threonylcarbamoyl-AMP synthase YPD4_0212 IPR006070 YrdC-like domain YPD4_0213 IPR041121 SDH, C-terminal YPD4_0213 IPR036291 NAD(P)-binding domain superfamily YPD4_0213 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPD4_0213 IPR022893 Shikimate dehydrogenase family YPD4_0213 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPD4_0213 IPR011342 Shikimate dehydrogenase YPD4_0214 IPR011004 Trimeric LpxA-like superfamily YPD4_0214 IPR001451 Hexapeptide repeat YPD4_0215 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0215 IPR002611 IstB-like ATP-binding protein YPD4_0215 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0215 IPR001270 ClpA/B family YPD4_0215 IPR003593 AAA+ ATPase domain YPD4_0216 IPR036397 Ribonuclease H superfamily YPD4_0216 IPR012337 Ribonuclease H-like superfamily YPD4_0216 IPR006120 Resolvase, HTH domain YPD4_0216 IPR017894 HTH domain, IS21 transposase-type YPD4_0216 IPR001584 Integrase, catalytic core YPD4_0218 IPR038377 Sodium/glucose symporter superfamily YPD4_0218 IPR014083 Cation/acetate symporter ActP YPD4_0218 IPR018212 Sodium/solute symporter, conserved site YPD4_0218 IPR001734 Sodium/solute symporter YPD4_0219 IPR007436 Protein of unknown function DUF485 YPD4_0220 IPR000873 AMP-dependent synthetase/ligase YPD4_0220 IPR042099 AMP-dependent synthetase-like superfamily YPD4_0220 IPR020845 AMP-binding, conserved site YPD4_0220 IPR025110 AMP-binding enzyme, C-terminal domain YPD4_0220 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain YPD4_0220 IPR011904 Acetate-CoA ligase YPD4_0221 IPR034703 Proton/glutamate-aspartate symporter GltP YPD4_0221 IPR033380 Glutamate-aspartate symport protein GltP/GltT YPD4_0221 IPR001991 Sodium:dicarboxylate symporter YPD4_0221 IPR018107 Sodium:dicarboxylate symporter, conserved site YPD4_0221 IPR036458 Sodium:dicarboxylate symporter superfamily YPD4_0222 IPR001789 Signal transduction response regulator, receiver domain YPD4_0222 IPR000792 Transcription regulator LuxR, C-terminal YPD4_0222 IPR011006 CheY-like superfamily YPD4_0222 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_0223 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_0223 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_0223 IPR005467 Histidine kinase domain YPD4_0223 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_0223 IPR001789 Signal transduction response regulator, receiver domain YPD4_0223 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_0223 IPR019247 Histidine kinase BarA, N-terminal YPD4_0223 IPR036641 HPT domain superfamily YPD4_0223 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_0223 IPR011006 CheY-like superfamily YPD4_0223 IPR003660 HAMP domain YPD4_0223 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPD4_0226 IPR018062 HTH domain AraC-type, conserved site YPD4_0226 IPR018060 DNA binding HTH domain, AraC-type YPD4_0226 IPR009057 Homeobox-like domain superfamily YPD4_0226 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like YPD4_0227 IPR006182 Secretory protein YscJ/FliF YPD4_0227 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPD4_0230 IPR001712 Type III secretion system FHIPEP YPD4_0230 IPR025505 FHIPEP conserved site YPD4_0230 IPR042196 FHIPEP, domain 4 YPD4_0230 IPR042193 FHIPEP, domain 3 YPD4_0230 IPR006302 Type III secretion protein HrcV YPD4_0231 IPR003593 AAA+ ATPase domain YPD4_0231 IPR005714 ATPase, type III secretion system, FliI/YscN YPD4_0231 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_0231 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0231 IPR040627 T3SS EscN ATPase, C-terminal YPD4_0231 IPR013380 ATPase, type III secretion system, H+-transporting YPD4_0234 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPD4_0234 IPR036429 SpoA-like superfamily YPD4_0234 IPR001543 Surface presentation of antigen (SpoA) YPD4_0234 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPD4_0235 IPR005838 Type III secretion system inner membrane P protein YPD4_0235 IPR005773 Yop virulence translocation protein R YPD4_0236 IPR006304 Type III secretion protein SpaR/YscT YPD4_0236 IPR002010 Type III secretion system inner membrane R protein YPD4_0237 IPR006135 Type III secretion system substrate exporter YPD4_0237 IPR029025 Type III secretion system substrate exporter, C-terminal YPD4_0237 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPD4_0238 IPR006135 Type III secretion system substrate exporter YPD4_0238 IPR029025 Type III secretion system substrate exporter, C-terminal YPD4_0238 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPD4_0239 IPR007272 Sulphur transport domain YPD4_0240 IPR000847 Transcription regulator HTH, LysR YPD4_0240 IPR005119 LysR, substrate-binding YPD4_0240 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0240 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0241 IPR018227 Amino acid/polyamine transporter 2 YPD4_0242 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPD4_0242 IPR006233 Cystathionine beta-lyase, bacterial YPD4_0242 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0242 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0242 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0243 IPR015863 ABC transporter, hemin import, HmuV YPD4_0243 IPR017871 ABC transporter, conserved site YPD4_0243 IPR003439 ABC transporter-like YPD4_0243 IPR003593 AAA+ ATPase domain YPD4_0243 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0244 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_0244 IPR037294 ABC transporter, BtuC-like YPD4_0245 IPR002491 ABC transporter periplasmic binding domain YPD4_0246 IPR007845 Haemin-degrading HemS/ChuX domain YPD4_0247 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_0247 IPR011276 TonB-dependent haem/haemoglobin receptor YPD4_0247 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPD4_0247 IPR012910 TonB-dependent receptor, plug domain YPD4_0247 IPR039426 Vitamin B12 transporter BtuB-like YPD4_0247 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_0247 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_0247 IPR010916 TonB box, conserved site YPD4_0248 IPR012910 TonB-dependent receptor, plug domain YPD4_0248 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_0248 IPR039426 Vitamin B12 transporter BtuB-like YPD4_0248 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_0248 IPR011276 TonB-dependent haem/haemoglobin receptor YPD4_0248 IPR010916 TonB box, conserved site YPD4_0248 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPD4_0248 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_0249 IPR036291 NAD(P)-binding domain superfamily YPD4_0249 IPR016040 NAD(P)-binding domain YPD4_0250 IPR010413 Intracellular heme transport protein HutX-like YPD4_0251 IPR023404 Radical SAM, alpha/beta horseshoe YPD4_0251 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPD4_0251 IPR006638 Elp3/MiaB/NifB YPD4_0251 IPR026332 Anaerobilin synthase HutW YPD4_0251 IPR007197 Radical SAM YPD4_0253 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPD4_0255 IPR011215 Phosphoribosyl transferase YPD4_0255 IPR028157 PELOTA RNA-binding domain YPD4_0259 IPR003325 TerD domain YPD4_0260 IPR003325 TerD domain YPD4_0260 IPR017115 Tellurite resistance, TerA YPD4_0261 IPR017115 Tellurite resistance, TerA YPD4_0261 IPR003325 TerD domain YPD4_0262 IPR029024 TerB-like YPD4_0262 IPR007791 Co-chaperone DjlA, N-terminal YPD4_0263 IPR022369 Integral membrane protein TerC, riboswitch-linked YPD4_0263 IPR005496 Integral membrane protein TerC YPD4_0264 IPR003325 TerD domain YPD4_0265 IPR003325 TerD domain YPD4_0267 IPR025885 PapC, N-terminal domain YPD4_0267 IPR025949 PapC-like, C-terminal domain YPD4_0267 IPR000015 Outer membrane usher protein YPD4_0267 IPR037224 PapC, N-terminal domain superfamily YPD4_0267 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_0268 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_0268 IPR008962 PapD-like superfamily YPD4_0268 IPR013783 Immunoglobulin-like fold YPD4_0268 IPR016147 Pili assembly chaperone, N-terminal YPD4_0270 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_0270 IPR016166 FAD-binding domain, PCMH-type YPD4_0270 IPR012951 Berberine/berberine-like YPD4_0270 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_0270 IPR006094 FAD linked oxidase, N-terminal YPD4_0271 IPR013425 Autotransporter-associated beta strand repeat YPD4_0271 IPR011050 Pectin lyase fold/virulence factor YPD4_0271 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_0271 IPR006315 Outer membrane autotransporter barrel YPD4_0271 IPR036709 Autotransporter beta-domain superfamily YPD4_0271 IPR005546 Autotransporter beta-domain YPD4_0272 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPD4_0272 IPR007440 Chorismate--pyruvate lyase YPD4_0273 IPR030470 UbiA prenyltransferase conserved site YPD4_0273 IPR000537 UbiA prenyltransferase family YPD4_0273 IPR039653 Prenyltransferase YPD4_0273 IPR006370 4-hydroxybenzoate polyprenyltransferase-like YPD4_0274 IPR002123 Phospholipid/glycerol acyltransferase YPD4_0274 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YPD4_0274 IPR041728 GPAT/DHAPAT, acyltransferase domain YPD4_0274 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YPD4_0275 IPR036945 Diacylglycerol kinase (DAGK) superfamily YPD4_0275 IPR033718 Diacylglycerol kinase, prokaryotic YPD4_0275 IPR000829 DAGK family YPD4_0276 IPR006197 Peptidase S24, LexA-like YPD4_0276 IPR006200 Transcription regulator LexA YPD4_0276 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0276 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0276 IPR015927 Peptidase S24/S26A/S26B/S26C YPD4_0276 IPR006199 LexA repressor, DNA-binding domain YPD4_0276 IPR036286 LexA/Signal peptidase-like superfamily YPD4_0276 IPR039418 LexA-like YPD4_0277 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0277 IPR002481 Ferric-uptake regulator YPD4_0277 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0278 IPR004653 tRNA-dihydrouridine(20/20a) synthase YPD4_0278 IPR013785 Aldolase-type TIM barrel YPD4_0278 IPR035587 DUS-like, FMN-binding domain YPD4_0278 IPR018517 tRNA-dihydrouridine synthase, conserved site YPD4_0278 IPR001269 tRNA-dihydrouridine synthase YPD4_0279 IPR011032 GroES-like superfamily YPD4_0279 IPR013154 Alcohol dehydrogenase, N-terminal YPD4_0279 IPR013149 Alcohol dehydrogenase, C-terminal YPD4_0279 IPR036291 NAD(P)-binding domain superfamily YPD4_0279 IPR020843 Polyketide synthase, enoylreductase domain YPD4_0279 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YPD4_0280 IPR007694 DNA helicase, DnaB-like, C-terminal YPD4_0280 IPR007693 DNA helicase, DnaB-like, N-terminal YPD4_0280 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPD4_0280 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0280 IPR007692 DNA helicase, DnaB type YPD4_0280 IPR003593 AAA+ ATPase domain YPD4_0280 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily YPD4_0281 IPR000821 Alanine racemase YPD4_0281 IPR011079 Alanine racemase, C-terminal YPD4_0281 IPR001608 Alanine racemase, N-terminal YPD4_0281 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPD4_0281 IPR029066 PLP-binding barrel YPD4_0281 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPD4_0282 IPR004839 Aminotransferase, class I/classII YPD4_0282 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0282 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPD4_0282 IPR000796 Aspartate/other aminotransferase YPD4_0282 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0282 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0283 IPR038056 YjbR-like superfamily YPD4_0283 IPR007351 Uncharacterised protein YjbR YPD4_0284 IPR041102 UvrA, interaction domain YPD4_0284 IPR004602 UvrABC system subunit A YPD4_0284 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0284 IPR041552 UvrA DNA-binding domain YPD4_0284 IPR003439 ABC transporter-like YPD4_0284 IPR017871 ABC transporter, conserved site YPD4_0285 IPR011344 Single-stranded DNA-binding protein YPD4_0285 IPR000424 Primosome PriB/single-strand DNA-binding YPD4_0285 IPR012340 Nucleic acid-binding, OB-fold YPD4_0286 IPR008000 Rhamnose/fucose mutarotase YPD4_0286 IPR011008 Dimeric alpha-beta barrel YPD4_0286 IPR013448 L-rhamnose mutarotase YPD4_0287 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPD4_0287 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPD4_0287 IPR039697 Iron-type alcohol dehydrogenase-like YPD4_0288 IPR001303 Class II aldolase/adducin N-terminal YPD4_0288 IPR013447 Rhamnulose-1-phosphate aldolase YPD4_0288 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPD4_0289 IPR036237 Xylose isomerase-like superfamily YPD4_0289 IPR009308 Rhamnose isomerase YPD4_0290 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_0290 IPR000577 Carbohydrate kinase, FGGY YPD4_0290 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_0290 IPR013449 Rhamnulokinase YPD4_0291 IPR020449 Transcription regulator HTH, AraC- type YPD4_0291 IPR014710 RmlC-like jelly roll fold YPD4_0291 IPR018060 DNA binding HTH domain, AraC-type YPD4_0291 IPR037923 Transcription regulator HTH-like YPD4_0291 IPR009057 Homeobox-like domain superfamily YPD4_0291 IPR003313 AraC-type arabinose-binding/dimerisation domain YPD4_0291 IPR023609 Transcription regulator HTH, RhaS YPD4_0292 IPR023699 Transcription activator HTH, RhaR YPD4_0292 IPR011051 RmlC-like cupin domain superfamily YPD4_0292 IPR014710 RmlC-like jelly roll fold YPD4_0292 IPR018062 HTH domain AraC-type, conserved site YPD4_0292 IPR003313 AraC-type arabinose-binding/dimerisation domain YPD4_0292 IPR009057 Homeobox-like domain superfamily YPD4_0292 IPR018060 DNA binding HTH domain, AraC-type YPD4_0292 IPR020449 Transcription regulator HTH, AraC- type YPD4_0293 IPR004673 L-rhamnose-proton symport, RhaT YPD4_0294 IPR008992 Enterotoxin YPD4_0296 IPR009057 Homeobox-like domain superfamily YPD4_0296 IPR001647 DNA-binding HTH domain, TetR-type YPD4_0296 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPD4_0297 IPR009051 Alpha-helical ferredoxin YPD4_0297 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPD4_0297 IPR023753 FAD/NAD(P)-binding domain YPD4_0297 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0297 IPR028261 Dihydroprymidine dehydrogenase domain II YPD4_0297 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_0297 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_0298 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_0298 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_0299 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPD4_0299 IPR006656 Molybdopterin oxidoreductase YPD4_0299 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_0299 IPR006478 Formate dehydrogenase, alpha subunit YPD4_0299 IPR041924 Formate dehydrogenase H, N-terminal YPD4_0299 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain YPD4_0299 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPD4_0299 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPD4_0299 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_0300 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YPD4_0300 IPR036249 Thioredoxin-like superfamily YPD4_0300 IPR013766 Thioredoxin domain YPD4_0300 IPR035671 DsbD gamma YPD4_0300 IPR017937 Thioredoxin, conserved site YPD4_0300 IPR022910 Thiol:disulphide interchange protein DsbD YPD4_0300 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPD4_0300 IPR003834 Cytochrome C biogenesis protein, transmembrane domain YPD4_0301 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPD4_0302 IPR018951 Fumarase C, C-terminal YPD4_0302 IPR024083 Fumarase/histidase, N-terminal YPD4_0302 IPR020557 Fumarate lyase, conserved site YPD4_0302 IPR000362 Fumarate lyase family YPD4_0302 IPR008948 L-Aspartase-like YPD4_0302 IPR004708 Aspartate ammonia-lyase YPD4_0302 IPR022761 Fumarate lyase, N-terminal YPD4_0303 IPR007313 FxsA cytoplasmic membrane protein YPD4_0304 IPR018370 Chaperonin Cpn60, conserved site YPD4_0304 IPR027409 GroEL-like apical domain superfamily YPD4_0304 IPR027413 GroEL-like equatorial domain superfamily YPD4_0304 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YPD4_0304 IPR001844 Chaperonin Cpn60 YPD4_0304 IPR002423 Chaperonin Cpn60/TCP-1 family YPD4_0305 IPR025294 Protein of unknown function DUF4156 YPD4_0306 IPR007197 Radical SAM YPD4_0306 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPD4_0306 IPR013785 Aldolase-type TIM barrel YPD4_0306 IPR022462 Lysine-2,3-aminomutase-like YPD4_0307 IPR012340 Nucleic acid-binding, OB-fold YPD4_0307 IPR015365 Elongation factor P, C-terminal YPD4_0307 IPR014722 Ribosomal protein L2, domain 2 YPD4_0307 IPR008991 Translation protein SH3-like domain superfamily YPD4_0307 IPR011768 Translation elongation factor P YPD4_0307 IPR020599 Translation elongation factor P/YeiP YPD4_0307 IPR013852 Translation elongation factor P/YeiP, conserved site YPD4_0307 IPR013185 Translation elongation factor, KOW-like YPD4_0307 IPR001059 Translation elongation factor P/YeiP, central YPD4_0308 IPR000390 Small multidrug resistance protein family YPD4_0309 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPD4_0309 IPR003418 Fumarate reductase, subunit D YPD4_0310 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPD4_0310 IPR003510 Fumarate reductase, subunit C YPD4_0311 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPD4_0311 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPD4_0311 IPR009051 Alpha-helical ferredoxin YPD4_0311 IPR012675 Beta-grasp domain superfamily YPD4_0311 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_0311 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_0311 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPD4_0311 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_0311 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_0312 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPD4_0312 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPD4_0312 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPD4_0312 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPD4_0312 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPD4_0312 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0312 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPD4_0312 IPR005884 Fumarate reductase, flavoprotein subunit YPD4_0313 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPD4_0313 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_0313 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPD4_0313 IPR004525 Elongation factor P--(R)-beta-lysine ligase YPD4_0314 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPD4_0314 IPR006686 Mechanosensitive ion channel MscS, conserved site YPD4_0314 IPR006685 Mechanosensitive ion channel MscS YPD4_0314 IPR010920 LSM domain superfamily YPD4_0314 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPD4_0314 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPD4_0314 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPD4_0314 IPR024393 Mechanosensitive ion channel MscS, porin domain YPD4_0315 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 YPD4_0315 IPR033177 Phosphatidylserine decarboxylase YPD4_0315 IPR003817 Phosphatidylserine decarboxylase-related YPD4_0316 IPR004881 Ribosome biogenesis GTPase RsgA YPD4_0316 IPR010914 RsgA GTPase domain YPD4_0316 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0316 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain YPD4_0317 IPR013520 Exonuclease, RNase T/DNA polymerase III YPD4_0317 IPR036397 Ribonuclease H superfamily YPD4_0317 IPR012337 Ribonuclease H-like superfamily YPD4_0317 IPR022894 Oligoribonuclease YPD4_0318 IPR009051 Alpha-helical ferredoxin YPD4_0318 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_0318 IPR013542 Domain of unknown function DUF1730 YPD4_0318 IPR004453 Epoxyqueuosine reductase QueG YPD4_0318 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_0319 IPR017953 Carbohydrate kinase, predicted, conserved site YPD4_0319 IPR004443 YjeF N-terminal domain YPD4_0319 IPR036652 YjeF N-terminal domain superfamily YPD4_0319 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr YPD4_0319 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase YPD4_0319 IPR029056 Ribokinase-like YPD4_0320 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YPD4_0320 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0321 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPD4_0322 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_0322 IPR037198 MutL, C-terminal domain superfamily YPD4_0322 IPR042121 MutL, C-terminal domain, regulatory subdomain YPD4_0322 IPR042120 MutL, C-terminal domain, dimerisation subdomain YPD4_0322 IPR014790 MutL, C-terminal, dimerisation YPD4_0322 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms YPD4_0322 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0322 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_0322 IPR013507 DNA mismatch repair protein, S5 domain 2-like YPD4_0322 IPR002099 DNA mismatch repair protein family, N-terminal YPD4_0322 IPR014762 DNA mismatch repair, conserved site YPD4_0322 IPR020667 DNA mismatch repair protein, MutL YPD4_0323 IPR039657 Dimethylallyltransferase YPD4_0323 IPR018022 IPP transferase YPD4_0323 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0324 IPR005001 RNA-binding protein Hfq YPD4_0324 IPR010920 LSM domain superfamily YPD4_0325 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0325 IPR025121 GTPase HflX, N-terminal YPD4_0325 IPR032305 GTP-binding protein, middle domain YPD4_0325 IPR042108 GTPase HflX, N-terminal domain superfamily YPD4_0325 IPR030394 HflX-type guanine nucleotide-binding (G) domain YPD4_0325 IPR035647 EF-G domain III/V-like YPD4_0325 IPR006073 GTP binding domain YPD4_0325 IPR016496 GTPase HflX YPD4_0326 IPR001107 Band 7 domain YPD4_0326 IPR010201 HflK YPD4_0326 IPR036013 Band 7/SPFH domain superfamily YPD4_0326 IPR001972 Stomatin family YPD4_0326 IPR020980 Menbrane protein HflK, N-terminal YPD4_0327 IPR010200 HflC YPD4_0327 IPR001107 Band 7 domain YPD4_0327 IPR036013 Band 7/SPFH domain superfamily YPD4_0328 IPR033128 Adenylosuccinate synthase, active site YPD4_0328 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0328 IPR042110 Adenylosuccinate synthetase, domain 2 YPD4_0328 IPR042111 Adenylosuccinate synthetase, domain 3 YPD4_0328 IPR001114 Adenylosuccinate synthetase YPD4_0328 IPR018220 Adenylosuccinate synthase, GTP-binding site YPD4_0328 IPR042109 Adenylosuccinate synthetase, domain 1 YPD4_0329 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0329 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0329 IPR023761 Transcriptional repressor HTH, NsrR YPD4_0329 IPR000944 Transcription regulator Rrf2-type YPD4_0329 IPR030489 Transcription regulator Rrf2-type, conserved site YPD4_0330 IPR040476 RNase II/RNase R, cold shock domain YPD4_0330 IPR013223 Ribonuclease B, N-terminal OB domain YPD4_0330 IPR001900 Ribonuclease II/R YPD4_0330 IPR012340 Nucleic acid-binding, OB-fold YPD4_0330 IPR004476 Ribonuclease II/ribonuclease R YPD4_0330 IPR011805 Ribonuclease R YPD4_0330 IPR013668 Ribonuclease R winged-helix domain YPD4_0330 IPR022967 RNA-binding domain, S1 YPD4_0330 IPR003029 S1 domain YPD4_0330 IPR022966 Ribonuclease II/R, conserved site YPD4_0330 IPR011129 Cold shock domain YPD4_0331 IPR040476 RNase II/RNase R, cold shock domain YPD4_0331 IPR003029 S1 domain YPD4_0331 IPR011805 Ribonuclease R YPD4_0331 IPR004476 Ribonuclease II/ribonuclease R YPD4_0331 IPR022966 Ribonuclease II/R, conserved site YPD4_0331 IPR001900 Ribonuclease II/R YPD4_0331 IPR013223 Ribonuclease B, N-terminal OB domain YPD4_0331 IPR012340 Nucleic acid-binding, OB-fold YPD4_0331 IPR011129 Cold shock domain YPD4_0331 IPR022967 RNA-binding domain, S1 YPD4_0331 IPR013668 Ribonuclease R winged-helix domain YPD4_0332 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_0332 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPD4_0332 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPD4_0332 IPR004441 RNA methyltransferase TrmH family YPD4_0332 IPR029064 50S ribosomal protein L30e-like YPD4_0332 IPR029028 Alpha/beta knot methyltransferases YPD4_0332 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPD4_0333 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPD4_0333 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPD4_0333 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPD4_0333 IPR041504 Adaptive response protein AidB, N-terminal YPD4_0333 IPR006089 Acyl-CoA dehydrogenase, conserved site YPD4_0333 IPR034184 Putative acyl-CoA dehydrogenase AidB YPD4_0333 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPD4_0334 IPR036275 YdgH-like superfamily YPD4_0334 IPR010854 Domain of unknown function DUF1471 YPD4_0334 IPR025543 Dodecin-like YPD4_0335 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0335 IPR002611 IstB-like ATP-binding protein YPD4_0335 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0335 IPR003593 AAA+ ATPase domain YPD4_0335 IPR001270 ClpA/B family YPD4_0336 IPR017894 HTH domain, IS21 transposase-type YPD4_0336 IPR001584 Integrase, catalytic core YPD4_0336 IPR036397 Ribonuclease H superfamily YPD4_0336 IPR012337 Ribonuclease H-like superfamily YPD4_0336 IPR006120 Resolvase, HTH domain YPD4_0337 IPR011704 ATPase, dynein-related, AAA domain YPD4_0337 IPR021961 Protein of unknown function DUF3578 YPD4_0337 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0337 IPR003593 AAA+ ATPase domain YPD4_0339 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0339 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site YPD4_0339 IPR002941 DNA methylase N-4/N-6 YPD4_0345 IPR010295 Protein of unknown function DUF898 YPD4_0347 IPR020449 Transcription regulator HTH, AraC- type YPD4_0347 IPR018062 HTH domain AraC-type, conserved site YPD4_0347 IPR018060 DNA binding HTH domain, AraC-type YPD4_0347 IPR009057 Homeobox-like domain superfamily YPD4_0348 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPD4_0348 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPD4_0348 IPR013011 Phosphotransferase system, EIIB component, type 2 YPD4_0348 IPR036095 PTS system IIB component-like superfamily YPD4_0349 IPR036095 PTS system IIB component-like superfamily YPD4_0349 IPR013011 Phosphotransferase system, EIIB component, type 2 YPD4_0349 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPD4_0349 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPD4_0350 IPR006327 Phosphotransferase system, fructose IIC component YPD4_0350 IPR013014 Phosphotransferase system, EIIC component, type 2 YPD4_0351 IPR002178 PTS EIIA type-2 domain YPD4_0351 IPR000032 Phosphocarrier protein HPr-like YPD4_0351 IPR016152 Phosphotransferase/anion transporter YPD4_0351 IPR036637 Phosphohistidine domain superfamily YPD4_0351 IPR023151 PEP-utilising enzyme, conserved site YPD4_0351 IPR000121 PEP-utilising enzyme, C-terminal YPD4_0351 IPR018274 PEP-utilising enzyme, active site YPD4_0351 IPR008279 PEP-utilising enzyme, mobile domain YPD4_0351 IPR008731 Phosphotransferase system, enzyme I N-terminal YPD4_0351 IPR006318 Phosphotransferase system, enzyme I-like YPD4_0351 IPR035895 HPr-like superfamily YPD4_0351 IPR040442 Pyruvate kinase-like domain superfamily YPD4_0351 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_0351 IPR036618 PtsI, HPr-binding domain superfamily YPD4_0351 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPD4_0352 IPR019637 Protein of unknown function DUF2501 YPD4_0353 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase YPD4_0353 IPR041720 Aldolase FbaB-like, archaeal-type YPD4_0353 IPR002915 DeoC/FbaB/ lacD aldolase YPD4_0353 IPR013785 Aldolase-type TIM barrel YPD4_0354 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPD4_0354 IPR028082 Periplasmic binding protein-like I YPD4_0354 IPR025997 Periplasmic binding protein YPD4_0355 IPR001851 ABC transporter, permease YPD4_0356 IPR001851 ABC transporter, permease YPD4_0357 IPR003593 AAA+ ATPase domain YPD4_0357 IPR017871 ABC transporter, conserved site YPD4_0357 IPR030281 Autoinducer 2 import ATP-binding protein LsrA YPD4_0357 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0357 IPR003439 ABC transporter-like YPD4_0358 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0358 IPR007324 Sugar-binding domain, putative YPD4_0358 IPR037171 NagB/RpiA transferase-like YPD4_0358 IPR012318 Crp-type HTH domain YPD4_0359 IPR000577 Carbohydrate kinase, FGGY YPD4_0359 IPR033676 Autoinducer-2 kinase YPD4_0359 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_0359 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_0360 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YPD4_0360 IPR002201 Glycosyl transferase, family 9 YPD4_0362 IPR006143 RND efflux pump, membrane fusion protein YPD4_0362 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_0363 IPR001036 Acriflavin resistance protein YPD4_0363 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_0364 IPR012334 Pectin lyase fold YPD4_0364 IPR011050 Pectin lyase fold/virulence factor YPD4_0364 IPR033131 Pectinesterase, Asp active site YPD4_0364 IPR000070 Pectinesterase, catalytic YPD4_0365 IPR029787 Nucleotide cyclase YPD4_0365 IPR009050 Globin-like superfamily YPD4_0365 IPR012292 Globin/Protoglobin YPD4_0365 IPR039435 Diguanylate cyclase DosC, globin sensor domain YPD4_0365 IPR000160 GGDEF domain YPD4_0366 IPR009885 Protein of unknown function DUF1435 YPD4_0367 IPR007848 Methyltransferase small domain YPD4_0367 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_0367 IPR013675 Methyltransferase small, N-terminal YPD4_0367 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0367 IPR023543 rRNA small subunit methyltransferase C YPD4_0368 IPR036654 DNA polymerase III, psi subunit superfamily YPD4_0368 IPR004615 DNA polymerase III, psi subunit YPD4_0368 IPR018382 DNA polymerase III, psi subunit, subgroup YPD4_0369 IPR016181 Acyl-CoA N-acyltransferase YPD4_0369 IPR000182 GNAT domain YPD4_0369 IPR006464 N-acetyltransferase RimI/Ard1 YPD4_0370 IPR004548 Peptide chain release factor 3 YPD4_0370 IPR004161 Translation elongation factor EFTu-like, domain 2 YPD4_0370 IPR041732 Peptide chain release factor 3, GTP-binding domain YPD4_0370 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily YPD4_0370 IPR031157 Tr-type G domain, conserved site YPD4_0370 IPR035647 EF-G domain III/V-like YPD4_0370 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0370 IPR005225 Small GTP-binding protein domain YPD4_0370 IPR032090 Peptide chain release factor 3, C-terminal YPD4_0370 IPR000795 Transcription factor, GTP-binding domain YPD4_0370 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_0371 IPR014004 Transport-associated and nodulation domain, bacteria YPD4_0371 IPR007055 BON domain YPD4_0372 IPR002641 Patatin-like phospholipase domain YPD4_0372 IPR037483 YjjU-like YPD4_0372 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPD4_0373 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPD4_0373 IPR032466 Metal-dependent hydrolase YPD4_0373 IPR001130 TatD family YPD4_0374 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPD4_0374 IPR002668 Concentrative nucleoside transporter N-terminal domain YPD4_0374 IPR011657 Concentrative nucleoside transporter C-terminal domain YPD4_0374 IPR008276 Concentrative nucleoside transporter YPD4_0374 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPD4_0375 IPR013785 Aldolase-type TIM barrel YPD4_0375 IPR011343 Deoxyribose-phosphate aldolase YPD4_0375 IPR002915 DeoC/FbaB/ lacD aldolase YPD4_0375 IPR023649 Deoxyribose-phosphate aldolase type II YPD4_0376 IPR000312 Glycosyl transferase, family 3 YPD4_0376 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily YPD4_0376 IPR017459 Glycosyl transferase family 3, N-terminal domain YPD4_0376 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal YPD4_0376 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site YPD4_0376 IPR013465 Thymidine phosphorylase YPD4_0376 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase YPD4_0376 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPD4_0376 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPD4_0376 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic YPD4_0377 IPR000312 Glycosyl transferase, family 3 YPD4_0377 IPR013465 Thymidine phosphorylase YPD4_0377 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily YPD4_0377 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPD4_0377 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal YPD4_0377 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPD4_0377 IPR017459 Glycosyl transferase family 3, N-terminal domain YPD4_0377 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic YPD4_0377 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site YPD4_0377 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase YPD4_0378 IPR024052 Phosphopentomutase DeoB cap domain superfamily YPD4_0378 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_0378 IPR010045 Phosphopentomutase YPD4_0378 IPR006124 Metalloenzyme YPD4_0379 IPR004402 Purine nucleoside phosphorylase DeoD-type YPD4_0379 IPR018016 Nucleoside phosphorylase, conserved site YPD4_0379 IPR000845 Nucleoside phosphorylase domain YPD4_0379 IPR035994 Nucleoside phosphorylase superfamily YPD4_0380 IPR019305 Uncharacterised protein family Smp YPD4_0381 IPR036412 HAD-like superfamily YPD4_0381 IPR023214 HAD superfamily YPD4_0381 IPR023190 Phosphoserine phosphatase, domain 2 YPD4_0381 IPR041449 Phosphoserine phosphatase, N-terminal YPD4_0382 IPR041166 LapB, rubredoxin metal binding domain YPD4_0382 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_0382 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPD4_0382 IPR003593 AAA+ ATPase domain YPD4_0382 IPR004504 DNA repair protein RadA YPD4_0382 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0382 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0383 IPR006417 Nicotinamide-nucleotide adenylyltransferase YPD4_0383 IPR004821 Cytidyltransferase-like domain YPD4_0383 IPR001387 Cro/C1-type helix-turn-helix domain YPD4_0383 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_0383 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0383 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain YPD4_0383 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0383 IPR016429 NAD biosynthesis/regulator protein NadR YPD4_0383 IPR038727 NadR/Ttd14, AAA domain YPD4_0385 IPR003593 AAA+ ATPase domain YPD4_0385 IPR003439 ABC transporter-like YPD4_0385 IPR017871 ABC transporter, conserved site YPD4_0385 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0385 IPR022374 Energy-dependent translational throttle protein EttA YPD4_0385 IPR032781 ABC-transporter extension domain YPD4_0386 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0386 IPR003439 ABC transporter-like YPD4_0386 IPR017871 ABC transporter, conserved site YPD4_0386 IPR022374 Energy-dependent translational throttle protein EttA YPD4_0386 IPR003593 AAA+ ATPase domain YPD4_0386 IPR032781 ABC-transporter extension domain YPD4_0387 IPR006665 OmpA-like domain YPD4_0387 IPR036737 OmpA-like domain superfamily YPD4_0387 IPR006664 Outer membrane protein, bacterial YPD4_0388 IPR029787 Nucleotide cyclase YPD4_0388 IPR033417 Periplasmic sensor domain CHASE8 YPD4_0388 IPR003660 HAMP domain YPD4_0388 IPR000160 GGDEF domain YPD4_0390 IPR023214 HAD superfamily YPD4_0390 IPR006068 Cation-transporting P-type ATPase, C-terminal YPD4_0390 IPR004014 Cation-transporting P-type ATPase, N-terminal YPD4_0390 IPR008250 P-type ATPase, A domain superfamily YPD4_0390 IPR023298 P-type ATPase, transmembrane domain superfamily YPD4_0390 IPR018303 P-type ATPase, phosphorylation site YPD4_0390 IPR023299 P-type ATPase, cytoplasmic domain N YPD4_0390 IPR036412 HAD-like superfamily YPD4_0390 IPR001757 P-type ATPase YPD4_0391 IPR023346 Lysozyme-like domain superfamily YPD4_0391 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily YPD4_0391 IPR012289 Lytic transglycosylase, superhelical linker YPD4_0391 IPR000189 Prokaryotic transglycosylase, active site YPD4_0391 IPR008258 Transglycosylase SLT domain 1 YPD4_0391 IPR008939 Lytic transglycosylase, superhelical U-shaped YPD4_0392 IPR038116 TrpR-like superfamily YPD4_0392 IPR010921 Trp repressor/replication initiator YPD4_0392 IPR013335 Trp repressor, bacterial YPD4_0392 IPR000831 Trp repressor YPD4_0393 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPD4_0393 IPR029001 Inosine triphosphate pyrophosphatase-like YPD4_0393 IPR002786 Inosine/xanthosine triphosphatase YPD4_0394 IPR023086 Phosphoglycerate mutase, GpmB, probable YPD4_0394 IPR013078 Histidine phosphatase superfamily, clade-1 YPD4_0394 IPR029033 Histidine phosphatase superfamily YPD4_0394 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPD4_0395 IPR018060 DNA binding HTH domain, AraC-type YPD4_0395 IPR020449 Transcription regulator HTH, AraC- type YPD4_0395 IPR009057 Homeobox-like domain superfamily YPD4_0395 IPR018062 HTH domain AraC-type, conserved site YPD4_0395 IPR029442 GyrI-like small molecule binding domain YPD4_0395 IPR010499 Bacterial transcription activator, effector binding YPD4_0395 IPR011256 Regulatory factor, effector binding domain superfamily YPD4_0396 IPR010292 Uncharacterised protein family CreA YPD4_0397 IPR001789 Signal transduction response regulator, receiver domain YPD4_0397 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_0397 IPR039420 Transcriptional regulatory protein WalR-like YPD4_0397 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0397 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_0397 IPR011006 CheY-like superfamily YPD4_0398 IPR018042 Aspartate kinase, conserved site YPD4_0398 IPR036393 Acetylglutamate kinase-like superfamily YPD4_0398 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPD4_0398 IPR002912 ACT domain YPD4_0398 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_0398 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPD4_0398 IPR036291 NAD(P)-binding domain superfamily YPD4_0398 IPR019811 Homoserine dehydrogenase, conserved site YPD4_0398 IPR001342 Homoserine dehydrogenase, catalytic YPD4_0398 IPR027795 CASTOR, ACT domain YPD4_0398 IPR001341 Aspartate kinase YPD4_0398 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPD4_0399 IPR019811 Homoserine dehydrogenase, conserved site YPD4_0399 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPD4_0399 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPD4_0399 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_0399 IPR036291 NAD(P)-binding domain superfamily YPD4_0399 IPR001341 Aspartate kinase YPD4_0399 IPR018042 Aspartate kinase, conserved site YPD4_0399 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPD4_0399 IPR036393 Acetylglutamate kinase-like superfamily YPD4_0399 IPR027795 CASTOR, ACT domain YPD4_0399 IPR001342 Homoserine dehydrogenase, catalytic YPD4_0399 IPR002912 ACT domain YPD4_0400 IPR013750 GHMP kinase, C-terminal domain YPD4_0400 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0400 IPR036554 GHMP kinase, C-terminal domain superfamily YPD4_0400 IPR006204 GHMP kinase N-terminal domain YPD4_0400 IPR006203 GHMP kinase, ATP-binding, conserved site YPD4_0400 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_0400 IPR000870 Homoserine kinase YPD4_0401 IPR004450 Threonine synthase-like YPD4_0401 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_0401 IPR029144 Threonine synthase, N-terminal YPD4_0401 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_0401 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPD4_0401 IPR037158 Threonine synthase, N-terminal domain superfamily YPD4_0402 IPR005583 Peroxide stress protein YaaA YPD4_0403 IPR013785 Aldolase-type TIM barrel YPD4_0403 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPD4_0403 IPR018225 Transaldolase, active site YPD4_0403 IPR004730 Transaldolase type 1 YPD4_0404 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPD4_0404 IPR001453 MoaB/Mog domain YPD4_0404 IPR036425 MoaB/Mog-like domain superfamily YPD4_0405 IPR011701 Major facilitator superfamily YPD4_0405 IPR020846 Major facilitator superfamily domain YPD4_0405 IPR036259 MFS transporter superfamily YPD4_0405 IPR005829 Sugar transporter, conserved site YPD4_0407 IPR000791 Acetate transporter GPR1/FUN34/SatP family YPD4_0408 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPD4_0408 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPD4_0408 IPR013126 Heat shock protein 70 family YPD4_0408 IPR018181 Heat shock protein 70, conserved site YPD4_0408 IPR012725 Chaperone DnaK YPD4_0409 IPR012724 Chaperone DnaJ YPD4_0409 IPR002939 Chaperone DnaJ, C-terminal YPD4_0409 IPR036869 Chaperone J-domain superfamily YPD4_0409 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily YPD4_0409 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YPD4_0409 IPR008971 HSP40/DnaJ peptide-binding YPD4_0409 IPR018253 DnaJ domain, conserved site YPD4_0409 IPR001623 DnaJ domain YPD4_0410 IPR023171 Na/H antiporter domain superfamily YPD4_0410 IPR004670 Na+/H+ antiporter NhaA YPD4_0411 IPR005119 LysR, substrate-binding YPD4_0411 IPR000847 Transcription regulator HTH, LysR YPD4_0411 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0411 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0412 IPR023468 Riboflavin kinase YPD4_0412 IPR002606 Riboflavin kinase, bacterial YPD4_0412 IPR015864 FAD synthetase YPD4_0412 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YPD4_0412 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_0412 IPR023465 Riboflavin kinase domain superfamily YPD4_0413 IPR002301 Isoleucine-tRNA ligase YPD4_0413 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPD4_0413 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPD4_0413 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_0413 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_0413 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPD4_0413 IPR023585 Isoleucine-tRNA ligase, type 1 YPD4_0413 IPR010663 Zinc finger, FPG/IleRS-type YPD4_0413 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPD4_0413 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain YPD4_0414 IPR001872 Peptidase A8, signal peptidase II YPD4_0415 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPD4_0416 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPD4_0417 IPR002686 Transposase IS200-like YPD4_0417 IPR036515 Transposase IS200-like superfamily YPD4_0418 IPR022663 Dihydrodipicolinate reductase, C-terminal YPD4_0418 IPR022664 Dihydrodipicolinate reductase, conserved site YPD4_0418 IPR023940 Dihydrodipicolinate reductase YPD4_0418 IPR036291 NAD(P)-binding domain superfamily YPD4_0418 IPR000846 Dihydrodipicolinate reductase, N-terminal YPD4_0419 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily YPD4_0419 IPR017926 Glutamine amidotransferase YPD4_0419 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain YPD4_0419 IPR029062 Class I glutamine amidotransferase-like YPD4_0419 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain YPD4_0419 IPR006274 Carbamoyl-phosphate synthase, small subunit YPD4_0420 IPR036914 Methylglyoxal synthase-like domain superfamily YPD4_0420 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain YPD4_0420 IPR016185 Pre-ATP-grasp domain superfamily YPD4_0420 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPD4_0420 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily YPD4_0420 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YPD4_0420 IPR006275 Carbamoyl-phosphate synthase, large subunit YPD4_0420 IPR011761 ATP-grasp fold YPD4_0420 IPR011607 Methylglyoxal synthase-like domain YPD4_0420 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YPD4_0421 IPR001123 Amino acid exporter protein, LeuE-type YPD4_0421 IPR004778 Homoserine/Threonine efflux protein YPD4_0422 IPR010619 Putative threonine/serine exporter YPD4_0423 IPR024528 Threonine/Serine exporter, ThrE YPD4_0423 IPR020914 Uncharacterised protein family UPF0442 YPD4_0424 IPR001796 Dihydrofolate reductase domain YPD4_0424 IPR017925 Dihydrofolate reductase conserved site YPD4_0424 IPR012259 Dihydrofolate reductase YPD4_0424 IPR024072 Dihydrofolate reductase-like domain superfamily YPD4_0425 IPR036515 Transposase IS200-like superfamily YPD4_0425 IPR002686 Transposase IS200-like YPD4_0427 IPR029052 Metallo-dependent phosphatase-like YPD4_0427 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_0427 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YPD4_0428 IPR023065 Uncharacterised protein family ApaG YPD4_0428 IPR036767 ApaG domain superfamily YPD4_0428 IPR007474 ApaG domain YPD4_0429 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YPD4_0429 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YPD4_0429 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPD4_0429 IPR023165 rRNA adenine dimethylase-like YPD4_0429 IPR011530 Ribosomal RNA adenine dimethylase YPD4_0429 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0430 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase YPD4_0430 IPR005255 PdxA family YPD4_0431 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPD4_0431 IPR023034 Peptidyl-prolyl isomerase SurA YPD4_0431 IPR027304 Trigger factor/SurA domain superfamily YPD4_0431 IPR015391 SurA N-terminal YPD4_0432 IPR005653 Organic solvent tolerance-like, N-terminal YPD4_0432 IPR007543 LptD, C-terminal YPD4_0432 IPR020889 LPS-assembly protein LptD YPD4_0433 IPR036869 Chaperone J-domain superfamily YPD4_0433 IPR023749 Co-chaperone DjlA YPD4_0433 IPR029024 TerB-like YPD4_0433 IPR001623 DnaJ domain YPD4_0433 IPR007791 Co-chaperone DjlA, N-terminal YPD4_0434 IPR006145 Pseudouridine synthase, RsuA/RluA YPD4_0434 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPD4_0434 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_0443 IPR017729 Type VI secretion system, ATPase ClpV1 YPD4_0443 IPR003593 AAA+ ATPase domain YPD4_0443 IPR018368 ClpA/B, conserved site 1 YPD4_0443 IPR019489 Clp ATPase, C-terminal YPD4_0443 IPR036628 Clp, N-terminal domain superfamily YPD4_0443 IPR004176 Clp, N-terminal YPD4_0443 IPR003959 ATPase, AAA-type, core YPD4_0443 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0443 IPR041546 ClpA/ClpB, AAA lid domain YPD4_0443 IPR001270 ClpA/B family YPD4_0444 IPR006531 Gp5 N-terminal YPD4_0444 IPR037026 Vgr protein, OB-fold domain superfamily YPD4_0444 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPD4_0444 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPD4_0452 IPR006665 OmpA-like domain YPD4_0452 IPR006690 Outer membrane protein, OmpA-like, conserved site YPD4_0452 IPR036737 OmpA-like domain superfamily YPD4_0452 IPR006664 Outer membrane protein, bacterial YPD4_0452 IPR008722 Outer membrane porin F, N-terminal YPD4_0452 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_0455 IPR040766 RapA, N-terminal Tudor-like domain 2 YPD4_0455 IPR000330 SNF2-related, N-terminal domain YPD4_0455 IPR038718 SNF2-like, N-terminal domain superfamily YPD4_0455 IPR022737 RNA polymerase recycling, bacterial, C-terminal YPD4_0455 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0455 IPR023949 RNA polymerase-associated protein RapA YPD4_0455 IPR001650 Helicase, C-terminal YPD4_0455 IPR040765 RapA, N-terminal Tudor like domain 1 YPD4_0455 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_0456 IPR036397 Ribonuclease H superfamily YPD4_0456 IPR042087 DNA polymerase family B, C-terminal domain YPD4_0456 IPR023211 DNA polymerase, palm domain superfamily YPD4_0456 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YPD4_0456 IPR006172 DNA-directed DNA polymerase, family B YPD4_0456 IPR017964 DNA-directed DNA polymerase, family B, conserved site YPD4_0456 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YPD4_0456 IPR012337 Ribonuclease H-like superfamily YPD4_0457 IPR032818 DedA family YPD4_0457 IPR032816 SNARE associated Golgi protein YPD4_0458 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0458 IPR017871 ABC transporter, conserved site YPD4_0458 IPR003593 AAA+ ATPase domain YPD4_0458 IPR003439 ABC transporter-like YPD4_0458 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YPD4_0459 IPR005947 Thiamine ABC transporter, permease protein YPD4_0459 IPR035906 MetI-like superfamily YPD4_0459 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0460 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter YPD4_0460 IPR006061 Solute-binding family 1, conserved site YPD4_0460 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria YPD4_0461 IPR023767 Transcriptional regulator SgrR YPD4_0461 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPD4_0461 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0461 IPR039424 Solute-binding protein family 5 YPD4_0461 IPR000914 Solute-binding protein family 5 domain YPD4_0462 IPR011701 Major facilitator superfamily YPD4_0462 IPR020846 Major facilitator superfamily domain YPD4_0462 IPR036259 MFS transporter superfamily YPD4_0462 IPR004750 Sugar efflux YPD4_0463 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0463 IPR001270 ClpA/B family YPD4_0463 IPR003593 AAA+ ATPase domain YPD4_0463 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0463 IPR002611 IstB-like ATP-binding protein YPD4_0464 IPR012337 Ribonuclease H-like superfamily YPD4_0464 IPR001584 Integrase, catalytic core YPD4_0464 IPR017894 HTH domain, IS21 transposase-type YPD4_0464 IPR036397 Ribonuclease H superfamily YPD4_0464 IPR006120 Resolvase, HTH domain YPD4_0465 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPD4_0465 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPD4_0465 IPR004431 3-isopropylmalate dehydratase, small subunit YPD4_0465 IPR033940 3-isopropylmalate dehydratase, swivel domain YPD4_0466 IPR033941 3-Isopropylmalate dehydratase, catalytic domain YPD4_0466 IPR004430 3-isopropylmalate dehydratase, large subunit YPD4_0466 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPD4_0466 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPD4_0466 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPD4_0466 IPR036008 Aconitase, iron-sulfur domain YPD4_0467 IPR004429 Isopropylmalate dehydrogenase YPD4_0467 IPR024084 Isopropylmalate dehydrogenase-like domain YPD4_0467 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPD4_0468 IPR013785 Aldolase-type TIM barrel YPD4_0468 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YPD4_0468 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YPD4_0468 IPR000891 Pyruvate carboxyltransferase YPD4_0468 IPR005671 2-isopropylmalate synthase, bacterial-type YPD4_0468 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily YPD4_0469 IPR000847 Transcription regulator HTH, LysR YPD4_0469 IPR005119 LysR, substrate-binding YPD4_0469 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0469 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0470 IPR020845 AMP-binding, conserved site YPD4_0470 IPR000873 AMP-dependent synthetase/ligase YPD4_0470 IPR042099 AMP-dependent synthetase-like superfamily YPD4_0471 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPD4_0471 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPD4_0471 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPD4_0471 IPR029061 Thiamin diphosphate-binding fold YPD4_0471 IPR012000 Thiamine pyrophosphate enzyme, central domain YPD4_0471 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPD4_0471 IPR000399 TPP-binding enzyme, conserved site YPD4_0471 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPD4_0472 IPR004789 Acetolactate synthase, small subunit YPD4_0472 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal YPD4_0472 IPR019455 Acetolactate synthase, small subunit, C-terminal YPD4_0472 IPR002912 ACT domain YPD4_0472 IPR039557 AHAS, ACT domain YPD4_0473 IPR036515 Transposase IS200-like superfamily YPD4_0473 IPR002686 Transposase IS200-like YPD4_0474 IPR012781 D-fructose-responsive transcription factor YPD4_0474 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0474 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPD4_0474 IPR000843 LacI-type HTH domain YPD4_0474 IPR028082 Periplasmic binding protein-like I YPD4_0475 IPR010574 L-alanine exporter AlaE YPD4_0476 IPR035644 MraZ, C-terminal YPD4_0476 IPR020603 MraZ domain YPD4_0476 IPR007159 SpoVT-AbrB domain YPD4_0476 IPR038619 MraZ superfamily YPD4_0476 IPR035642 MraZ, N-terminal YPD4_0476 IPR003444 Transcriptional regulator MraZ YPD4_0476 IPR037914 SpoVT-AbrB domain superfamily YPD4_0477 IPR002903 Ribosomal RNA small subunit methyltransferase H YPD4_0477 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily YPD4_0477 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0478 IPR011922 Cell division protein FtsL YPD4_0479 IPR005311 Penicillin-binding protein, dimerisation domain YPD4_0479 IPR037532 Peptidoglycan D,D-transpeptidase FtsI YPD4_0479 IPR001460 Penicillin-binding protein, transpeptidase YPD4_0479 IPR012338 Beta-lactamase/transpeptidase-like YPD4_0479 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPD4_0480 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YPD4_0480 IPR035911 MurE/MurF, N-terminal YPD4_0480 IPR000713 Mur ligase, N-terminal catalytic domain YPD4_0480 IPR036565 Mur-like, catalytic domain superfamily YPD4_0480 IPR004101 Mur ligase, C-terminal YPD4_0480 IPR036615 Mur ligase, C-terminal domain superfamily YPD4_0480 IPR013221 Mur ligase, central YPD4_0481 IPR036615 Mur ligase, C-terminal domain superfamily YPD4_0481 IPR035911 MurE/MurF, N-terminal YPD4_0481 IPR000713 Mur ligase, N-terminal catalytic domain YPD4_0481 IPR004101 Mur ligase, C-terminal YPD4_0481 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YPD4_0481 IPR036565 Mur-like, catalytic domain superfamily YPD4_0481 IPR013221 Mur ligase, central YPD4_0482 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YPD4_0482 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YPD4_0482 IPR000715 Glycosyl transferase, family 4 YPD4_0483 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YPD4_0483 IPR013221 Mur ligase, central YPD4_0483 IPR036615 Mur ligase, C-terminal domain superfamily YPD4_0483 IPR004101 Mur ligase, C-terminal YPD4_0483 IPR036565 Mur-like, catalytic domain superfamily YPD4_0484 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPD4_0484 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPD4_0484 IPR013437 Probable peptidoglycan glycosyltransferase FtsW YPD4_0485 IPR006009 N-acetylglucosaminyltransferase, MurG YPD4_0485 IPR004276 Glycosyltransferase family 28, N-terminal domain YPD4_0485 IPR007235 Glycosyl transferase, family 28, C-terminal YPD4_0486 IPR036565 Mur-like, catalytic domain superfamily YPD4_0486 IPR005758 UDP-N-acetylmuramate--L-alanine ligase YPD4_0486 IPR000713 Mur ligase, N-terminal catalytic domain YPD4_0486 IPR013221 Mur ligase, central YPD4_0486 IPR036615 Mur ligase, C-terminal domain superfamily YPD4_0486 IPR004101 Mur ligase, C-terminal YPD4_0487 IPR016185 Pre-ATP-grasp domain superfamily YPD4_0487 IPR005905 D-alanine--D-alanine ligase YPD4_0487 IPR011095 D-alanine--D-alanine ligase, C-terminal YPD4_0487 IPR011761 ATP-grasp fold YPD4_0487 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YPD4_0487 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YPD4_0487 IPR013815 ATP-grasp fold, subdomain 1 YPD4_0488 IPR013685 POTRA domain, FtsQ-type YPD4_0488 IPR026579 Cell division protein FtsQ YPD4_0488 IPR005548 Cell division protein FtsQ/DivIB YPD4_0488 IPR034746 POTRA domain YPD4_0489 IPR003494 SHS2 domain inserted in FtsA YPD4_0489 IPR020823 Cell division protein FtsA YPD4_0490 IPR008280 Tubulin/FtsZ, C-terminal YPD4_0490 IPR003008 Tubulin/FtsZ, GTPase domain YPD4_0490 IPR020805 Cell division protein FtsZ, conserved site YPD4_0490 IPR036525 Tubulin/FtsZ, GTPase domain superfamily YPD4_0490 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPD4_0490 IPR000158 Cell division protein FtsZ YPD4_0490 IPR024757 Cell division protein FtsZ, C-terminal YPD4_0491 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YPD4_0491 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YPD4_0491 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YPD4_0491 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0493 IPR009502 Secretion monitor YPD4_0494 IPR020937 SecA conserved site YPD4_0494 IPR036670 SecA, preprotein cross-linking domain superfamily YPD4_0494 IPR000185 Protein translocase subunit SecA YPD4_0494 IPR011130 SecA, preprotein cross-linking domain YPD4_0494 IPR014018 SecA motor DEAD YPD4_0494 IPR011116 SecA Wing/Scaffold YPD4_0494 IPR011115 SecA DEAD-like, N-terminal YPD4_0494 IPR004027 SEC-C motif YPD4_0494 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0494 IPR036266 SecA, Wing/Scaffold superfamily YPD4_0495 IPR020476 NUDIX hydrolase YPD4_0495 IPR000086 NUDIX hydrolase domain YPD4_0495 IPR020084 NUDIX hydrolase, conserved site YPD4_0495 IPR003561 Mutator MutT YPD4_0495 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_0496 IPR003593 AAA+ ATPase domain YPD4_0496 IPR002611 IstB-like ATP-binding protein YPD4_0496 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0496 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0496 IPR001270 ClpA/B family YPD4_0497 IPR001584 Integrase, catalytic core YPD4_0497 IPR017894 HTH domain, IS21 transposase-type YPD4_0497 IPR006120 Resolvase, HTH domain YPD4_0497 IPR012337 Ribonuclease H-like superfamily YPD4_0497 IPR036397 Ribonuclease H superfamily YPD4_0498 IPR032808 DoxX family YPD4_0499 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YPD4_0500 IPR010279 Inner membrane protein YqjD/ElaB YPD4_0502 IPR027398 SecD export protein N-terminal TM domain YPD4_0502 IPR026574 Modulator protein MzrA YPD4_0503 IPR032818 DedA family YPD4_0503 IPR032816 SNARE associated Golgi protein YPD4_0505 IPR011711 GntR, C-terminal YPD4_0505 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0505 IPR008920 Transcription regulator FadR/GntR, C-terminal YPD4_0505 IPR000524 Transcription regulator HTH, GntR YPD4_0505 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0506 IPR036259 MFS transporter superfamily YPD4_0506 IPR020846 Major facilitator superfamily domain YPD4_0506 IPR011701 Major facilitator superfamily YPD4_0507 IPR032466 Metal-dependent hydrolase YPD4_0507 IPR003766 Uronate isomerase YPD4_0508 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_0508 IPR013131 Mannitol dehydrogenase, N-terminal YPD4_0508 IPR036291 NAD(P)-binding domain superfamily YPD4_0508 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_0508 IPR023668 Altronate oxidoreductase YPD4_0508 IPR013118 Mannitol dehydrogenase, C-terminal YPD4_0509 IPR007392 D-galactarate/Altronate dehydratase, C-terminal YPD4_0509 IPR013974 SAF domain YPD4_0510 IPR026267 Inner membrane protein YgjV YPD4_0510 IPR019629 Uncharacterised protein family HI1736/YgjV YPD4_0512 IPR001991 Sodium:dicarboxylate symporter YPD4_0512 IPR036458 Sodium:dicarboxylate symporter superfamily YPD4_0512 IPR023025 Serine/threonine transporter SstT YPD4_0513 IPR000683 Oxidoreductase, N-terminal YPD4_0513 IPR036291 NAD(P)-binding domain superfamily YPD4_0514 IPR002725 Protein of unknown function DUF45 YPD4_0515 IPR005546 Autotransporter beta-domain YPD4_0515 IPR036709 Autotransporter beta-domain superfamily YPD4_0515 IPR006315 Outer membrane autotransporter barrel YPD4_0515 IPR011050 Pectin lyase fold/virulence factor YPD4_0516 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YPD4_0516 IPR007848 Methyltransferase small domain YPD4_0516 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_0516 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0517 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPD4_0517 IPR023753 FAD/NAD(P)-binding domain YPD4_0517 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0517 IPR013785 Aldolase-type TIM barrel YPD4_0518 IPR005325 Protein of unknown function DUF308, membrane YPD4_0521 IPR011392 Tellurite resistance, TerY YPD4_0521 IPR002035 von Willebrand factor, type A YPD4_0521 IPR036465 von Willebrand factor A-like domain superfamily YPD4_0523 IPR003325 TerD domain YPD4_0524 IPR036465 von Willebrand factor A-like domain superfamily YPD4_0524 IPR002035 von Willebrand factor, type A YPD4_0524 IPR011392 Tellurite resistance, TerY YPD4_0525 IPR013686 Polypeptide-transport-associated, ShlB-type YPD4_0525 IPR027282 Two partner secretion pathway transporter YPD4_0525 IPR035251 ShlB, POTRA domain YPD4_0525 IPR005565 Haemolysin activator HlyB, C-terminal YPD4_0525 IPR034746 POTRA domain YPD4_0526 IPR006914 VENN motif-containing domain YPD4_0526 IPR011050 Pectin lyase fold/virulence factor YPD4_0526 IPR012334 Pectin lyase fold YPD4_0526 IPR025157 Hemagglutinin repeat YPD4_0526 IPR024973 ESPR domain YPD4_0526 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPD4_0526 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_0527 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPD4_0527 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_0527 IPR012334 Pectin lyase fold YPD4_0527 IPR011050 Pectin lyase fold/virulence factor YPD4_0527 IPR006914 VENN motif-containing domain YPD4_0527 IPR024973 ESPR domain YPD4_0527 IPR025157 Hemagglutinin repeat YPD4_0531 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_0531 IPR040582 MalK, OB fold domain YPD4_0531 IPR003593 AAA+ ATPase domain YPD4_0531 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0531 IPR005116 Transport-associated OB, type 1 YPD4_0531 IPR017871 ABC transporter, conserved site YPD4_0531 IPR003439 ABC transporter-like YPD4_0532 IPR008928 Six-hairpin glycosidase superfamily YPD4_0532 IPR012341 Six-hairpin glycosidase-like superfamily YPD4_0532 IPR033432 Glycosyl hydrolase 36, catalytic domain YPD4_0533 IPR028082 Periplasmic binding protein-like I YPD4_0533 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0533 IPR000843 LacI-type HTH domain YPD4_0534 IPR006059 Bacterial extracellular solute-binding protein YPD4_0535 IPR035906 MetI-like superfamily YPD4_0535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0536 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0536 IPR035906 MetI-like superfamily YPD4_0538 IPR017853 Glycoside hydrolase superfamily YPD4_0538 IPR026891 Fibronectin type III-like domain YPD4_0538 IPR019800 Glycoside hydrolase, family 3, active site YPD4_0538 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPD4_0538 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily YPD4_0538 IPR001764 Glycoside hydrolase, family 3, N-terminal YPD4_0538 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPD4_0538 IPR013783 Immunoglobulin-like fold YPD4_0540 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPD4_0541 IPR005694 Efflux pump membrane protein YPD4_0541 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_0541 IPR030196 Multidrug resistance protein MdtN YPD4_0546 IPR006056 RidA family YPD4_0546 IPR019897 RidA, conserved site YPD4_0546 IPR006175 YjgF/YER057c/UK114 family YPD4_0546 IPR035959 RutC-like superfamily YPD4_0550 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0550 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0550 IPR000847 Transcription regulator HTH, LysR YPD4_0550 IPR005119 LysR, substrate-binding YPD4_0555 IPR013324 RNA polymerase sigma factor, region 3/4-like YPD4_0555 IPR000943 RNA polymerase sigma-70 YPD4_0555 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0555 IPR028630 RNA polymerase sigma factor RpoD YPD4_0555 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YPD4_0555 IPR013325 RNA polymerase sigma factor, region 2 YPD4_0555 IPR009042 RNA polymerase sigma-70 region 1.2 YPD4_0555 IPR007127 RNA polymerase sigma factor 70, region 1.1 YPD4_0555 IPR042189 Sigma-70 factor, region 1.1 superfamily YPD4_0555 IPR007631 RNA polymerase sigma factor 70, non-essential domain YPD4_0555 IPR007630 RNA polymerase sigma-70 region 4 YPD4_0555 IPR007624 RNA polymerase sigma-70 region 3 YPD4_0555 IPR007627 RNA polymerase sigma-70 region 2 YPD4_0555 IPR014284 RNA polymerase sigma-70 like domain YPD4_0556 IPR034151 Bacterial DnaG primase, TOPRIM domain YPD4_0556 IPR030846 DNA primase DnaG, bacteria YPD4_0556 IPR013264 DNA primase, catalytic core, N-terminal YPD4_0556 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily YPD4_0556 IPR006171 TOPRIM domain YPD4_0556 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPD4_0556 IPR002694 Zinc finger, CHC2-type YPD4_0556 IPR019475 DNA primase, DnaB-helicase binding domain YPD4_0556 IPR036977 DNA Primase, CHC2-type zinc finger YPD4_0556 IPR013173 DNA primase DnaG, DnaB-binding domain YPD4_0556 IPR006295 DNA primase, DnaG YPD4_0557 IPR034151 Bacterial DnaG primase, TOPRIM domain YPD4_0557 IPR030846 DNA primase DnaG, bacteria YPD4_0557 IPR006171 TOPRIM domain YPD4_0557 IPR013173 DNA primase DnaG, DnaB-binding domain YPD4_0557 IPR006295 DNA primase, DnaG YPD4_0557 IPR036977 DNA Primase, CHC2-type zinc finger YPD4_0557 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily YPD4_0557 IPR013264 DNA primase, catalytic core, N-terminal YPD4_0557 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPD4_0557 IPR019475 DNA primase, DnaB-helicase binding domain YPD4_0557 IPR002694 Zinc finger, CHC2-type YPD4_0558 IPR000905 Gcp-like domain YPD4_0558 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YPD4_0558 IPR017860 Peptidase M22, conserved site YPD4_0558 IPR017861 Kae1/TsaD family YPD4_0559 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YPD4_0560 IPR006157 Dihydroneopterin aldolase/epimerase domain YPD4_0560 IPR006156 Dihydroneopterin aldolase YPD4_0561 IPR003824 Undecaprenyl-diphosphatase UppP YPD4_0562 IPR006674 HD domain YPD4_0562 IPR003607 HD/PDEase domain YPD4_0562 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPD4_0562 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPD4_0562 IPR002646 Poly A polymerase, head domain YPD4_0563 IPR003607 HD/PDEase domain YPD4_0563 IPR006674 HD domain YPD4_0563 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPD4_0563 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPD4_0563 IPR002646 Poly A polymerase, head domain YPD4_0564 IPR003646 SH3-like domain, bacterial-type YPD4_0564 IPR016476 SH3 domain protein YPD4_0565 IPR007899 CHAD domain YPD4_0565 IPR033469 CYTH-like domain superfamily YPD4_0565 IPR023577 CYTH domain YPD4_0565 IPR039013 Inorganic triphosphatase YgiF YPD4_0566 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme YPD4_0566 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPD4_0566 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YPD4_0567 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_0567 IPR029056 Ribokinase-like YPD4_0567 IPR011914 RfaE bifunctional protein, domain II YPD4_0567 IPR011913 RfaE bifunctional protein, domain I YPD4_0567 IPR011611 Carbohydrate kinase PfkB YPD4_0567 IPR004821 Cytidyltransferase-like domain YPD4_0567 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_0567 IPR023030 Bifunctional protein HldE YPD4_0568 IPR002293 Amino acid/polyamine transporter I YPD4_0569 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPD4_0569 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YPD4_0570 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type YPD4_0570 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPD4_0571 IPR016185 Pre-ATP-grasp domain superfamily YPD4_0571 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPD4_0572 IPR016185 Pre-ATP-grasp domain superfamily YPD4_0572 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPD4_0573 IPR009576 Biofilm formation YgiB YPD4_0574 IPR010130 Type I secretion outer membrane protein, TolC YPD4_0574 IPR003423 Outer membrane efflux protein YPD4_0575 IPR004385 Nucleoside diphosphate pyrophosphatase YPD4_0575 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_0575 IPR020084 NUDIX hydrolase, conserved site YPD4_0575 IPR000086 NUDIX hydrolase domain YPD4_0576 IPR009659 Protein of unknown function DUF1249 YPD4_0577 IPR029052 Metallo-dependent phosphatase-like YPD4_0577 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_0577 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA YPD4_0578 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPD4_0578 IPR029058 Alpha/Beta hydrolase fold YPD4_0579 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0579 IPR002288 DNA gyrase B subunit, C-terminal YPD4_0579 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPD4_0579 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPD4_0579 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_0579 IPR018522 DNA topoisomerase, type IIA, conserved site YPD4_0579 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YPD4_0579 IPR006171 TOPRIM domain YPD4_0579 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_0579 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_0579 IPR001241 DNA topoisomerase, type IIA YPD4_0579 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPD4_0580 IPR000847 Transcription regulator HTH, LysR YPD4_0580 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0580 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0580 IPR005119 LysR, substrate-binding YPD4_0581 IPR003680 Flavodoxin-like fold YPD4_0581 IPR029039 Flavoprotein-like superfamily YPD4_0582 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPD4_0582 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPD4_0582 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPD4_0582 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPD4_0582 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPD4_0582 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPD4_0582 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YPD4_0583 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YPD4_0583 IPR002123 Phospholipid/glycerol acyltransferase YPD4_0584 IPR008972 Cupredoxin YPD4_0584 IPR026589 Cell division protein FtsP YPD4_0584 IPR011706 Multicopper oxidase, type 2 YPD4_0584 IPR011707 Multicopper oxidase, type 3 YPD4_0584 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_0585 IPR023404 Radical SAM, alpha/beta horseshoe YPD4_0585 IPR024560 Uncharacterised protein family UPF0313, C-terminal YPD4_0585 IPR022946 Uncharacterised protein family UPF0313 YPD4_0585 IPR013704 Uncharacterised protein family UPF0313, N-terminal YPD4_0585 IPR007197 Radical SAM YPD4_0585 IPR020612 Methylthiotransferase, conserved site YPD4_0585 IPR006638 Elp3/MiaB/NifB YPD4_0586 IPR013704 Uncharacterised protein family UPF0313, N-terminal YPD4_0586 IPR022946 Uncharacterised protein family UPF0313 YPD4_0586 IPR006638 Elp3/MiaB/NifB YPD4_0586 IPR024560 Uncharacterised protein family UPF0313, C-terminal YPD4_0586 IPR007197 Radical SAM YPD4_0586 IPR023404 Radical SAM, alpha/beta horseshoe YPD4_0586 IPR020612 Methylthiotransferase, conserved site YPD4_0587 IPR023210 NADP-dependent oxidoreductase domain YPD4_0587 IPR018170 Aldo/keto reductase, conserved site YPD4_0587 IPR020471 Aldo/keto reductase YPD4_0587 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_0588 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPD4_0588 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPD4_0589 IPR009057 Homeobox-like domain superfamily YPD4_0589 IPR018060 DNA binding HTH domain, AraC-type YPD4_0589 IPR009594 Transcription regulator HTH, AraC, N-terminal YPD4_0590 IPR032818 DedA family YPD4_0590 IPR032816 SNARE associated Golgi protein YPD4_0591 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPD4_0591 IPR006233 Cystathionine beta-lyase, bacterial YPD4_0591 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0591 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0591 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0592 IPR014164 TonB-system energizer ExbB type-1 YPD4_0592 IPR002898 MotA/TolQ/ExbB proton channel YPD4_0593 IPR003400 Biopolymer transport protein ExbD/TolR YPD4_0593 IPR014170 TonB system transport protein ExbD type-1 YPD4_0600 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0600 IPR022399 Helicase/secretion neighbourhood ATPase YPD4_0600 IPR001482 Type II/IV secretion system protein YPD4_0602 IPR007055 BON domain YPD4_0602 IPR014004 Transport-associated and nodulation domain, bacteria YPD4_0602 IPR001775 GspD/PilQ family YPD4_0602 IPR032789 Pilus formation protein, N-terminal YPD4_0602 IPR004846 Type II/III secretion system YPD4_0603 IPR014004 Transport-associated and nodulation domain, bacteria YPD4_0603 IPR004846 Type II/III secretion system YPD4_0603 IPR032789 Pilus formation protein, N-terminal YPD4_0603 IPR007055 BON domain YPD4_0603 IPR001775 GspD/PilQ family YPD4_0606 IPR036515 Transposase IS200-like superfamily YPD4_0606 IPR002686 Transposase IS200-like YPD4_0607 IPR036515 Transposase IS200-like superfamily YPD4_0607 IPR002686 Transposase IS200-like YPD4_0608 IPR037224 PapC, N-terminal domain superfamily YPD4_0608 IPR025885 PapC, N-terminal domain YPD4_0608 IPR018030 Fimbrial membrane usher, conserved site YPD4_0608 IPR000015 Outer membrane usher protein YPD4_0608 IPR025949 PapC-like, C-terminal domain YPD4_0608 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_0609 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_0609 IPR016148 Pili assembly chaperone, C-terminal YPD4_0609 IPR018046 Pili assembly chaperone, conserved site YPD4_0609 IPR016147 Pili assembly chaperone, N-terminal YPD4_0609 IPR013783 Immunoglobulin-like fold YPD4_0609 IPR008962 PapD-like superfamily YPD4_0609 IPR001829 Pili assembly chaperone, bacterial YPD4_0610 IPR015303 Fimbrial adhesin F17-AG, lectin domain YPD4_0610 IPR008966 Adhesion domain superfamily YPD4_0610 IPR036937 Fimbrial-type adhesion domain superfamily YPD4_0610 IPR000259 Fimbrial-type adhesion domain YPD4_0611 IPR002491 ABC transporter periplasmic binding domain YPD4_0613 IPR025505 FHIPEP conserved site YPD4_0613 IPR042194 FHIPEP, domain 1 YPD4_0613 IPR042193 FHIPEP, domain 3 YPD4_0613 IPR001712 Type III secretion system FHIPEP YPD4_0613 IPR006301 Flagellar biosynthesis protein FlhA YPD4_0613 IPR042196 FHIPEP, domain 4 YPD4_0614 IPR006301 Flagellar biosynthesis protein FlhA YPD4_0614 IPR042194 FHIPEP, domain 1 YPD4_0614 IPR042193 FHIPEP, domain 3 YPD4_0614 IPR001712 Type III secretion system FHIPEP YPD4_0614 IPR042196 FHIPEP, domain 4 YPD4_0614 IPR025505 FHIPEP conserved site YPD4_0615 IPR029025 Type III secretion system substrate exporter, C-terminal YPD4_0615 IPR006135 Type III secretion system substrate exporter YPD4_0615 IPR006136 Flagellar biosynthetic protein FlhB YPD4_0616 IPR006303 Flagellar biosynthesis protein FliR YPD4_0616 IPR002010 Type III secretion system inner membrane R protein YPD4_0617 IPR005837 Flagellar transport protein FliP YPD4_0617 IPR005838 Type III secretion system inner membrane P protein YPD4_0618 IPR012826 Flagellar motor switch FliN YPD4_0618 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPD4_0618 IPR001543 Surface presentation of antigen (SpoA) YPD4_0618 IPR036429 SpoA-like superfamily YPD4_0620 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPD4_0620 IPR025944 Sigma-54 interaction domain, conserved site YPD4_0620 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_0620 IPR002078 RNA polymerase sigma factor 54 interaction domain YPD4_0620 IPR001789 Signal transduction response regulator, receiver domain YPD4_0620 IPR002197 DNA binding HTH domain, Fis-type YPD4_0620 IPR009057 Homeobox-like domain superfamily YPD4_0620 IPR011006 CheY-like superfamily YPD4_0620 IPR003593 AAA+ ATPase domain YPD4_0620 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0621 IPR001624 Flagellar hook-basal body complex protein FliE YPD4_0622 IPR013556 Flagellar M-ring C-terminal YPD4_0622 IPR006182 Secretory protein YscJ/FliF YPD4_0622 IPR000067 Flagellar M-ring protein FliF YPD4_0625 IPR005714 ATPase, type III secretion system, FliI/YscN YPD4_0625 IPR020005 Flagellar export ATPase FliI, clade 1 YPD4_0625 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_0625 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPD4_0625 IPR003593 AAA+ ATPase domain YPD4_0625 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0625 IPR032463 ATPase, type III secretion system, FliI YPD4_0625 IPR040627 T3SS EscN ATPase, C-terminal YPD4_0628 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPD4_0628 IPR013974 SAF domain YPD4_0628 IPR039246 Flagellar protein FlgA YPD4_0629 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_0629 IPR019776 Flagellar basal body rod protein, conserved site YPD4_0629 IPR006300 Flagellar basal-body rod protein FlgB YPD4_0630 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_0630 IPR006299 Flagellar basal-body rod protein FlgC YPD4_0630 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_0630 IPR019776 Flagellar basal body rod protein, conserved site YPD4_0631 IPR025965 FlgD Ig-like domain YPD4_0631 IPR005648 Flagellar hook capping protein YPD4_0631 IPR025963 FlgD Tudor-like domain YPD4_0632 IPR037058 Flagellar hook protein FlgE superfamily YPD4_0632 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPD4_0632 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_0632 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPD4_0632 IPR019776 Flagellar basal body rod protein, conserved site YPD4_0632 IPR011491 Flagellar hook protein FlgE YPD4_0632 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_0634 IPR019776 Flagellar basal body rod protein, conserved site YPD4_0634 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPD4_0634 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_0634 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_0634 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPD4_0635 IPR012834 Flagellar basal-body rod FlgG YPD4_0635 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPD4_0635 IPR019776 Flagellar basal body rod protein, conserved site YPD4_0635 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPD4_0635 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_0635 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_0636 IPR000527 Flagellar L-ring protein YPD4_0637 IPR001782 Flagellar P-ring protein YPD4_0638 IPR002371 Flagellar hook-associated protein 1 YPD4_0638 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_0638 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_0642 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_0642 IPR040970 CadC C-terminal domain 1 YPD4_0642 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0642 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_0642 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_0642 IPR039420 Transcriptional regulatory protein WalR-like YPD4_0643 IPR001029 Flagellin, D0/D1 domain YPD4_0643 IPR001492 Flagellin YPD4_0643 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPD4_0644 IPR001492 Flagellin YPD4_0644 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPD4_0644 IPR001029 Flagellin, D0/D1 domain YPD4_0645 IPR001492 Flagellin YPD4_0645 IPR001029 Flagellin, D0/D1 domain YPD4_0645 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPD4_0646 IPR003481 Flagellar hook-associated protein 2, N-terminal YPD4_0646 IPR010810 Flagellin hook, IN motif YPD4_0646 IPR040026 Flagellar hook-associated protein 2 YPD4_0646 IPR010809 Flagellar hook-associated protein 2, C-terminal YPD4_0651 IPR014284 RNA polymerase sigma-70 like domain YPD4_0651 IPR007630 RNA polymerase sigma-70 region 4 YPD4_0651 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPD4_0651 IPR013324 RNA polymerase sigma factor, region 3/4-like YPD4_0651 IPR013325 RNA polymerase sigma factor, region 2 YPD4_0651 IPR007627 RNA polymerase sigma-70 region 2 YPD4_0651 IPR000943 RNA polymerase sigma-70 YPD4_0652 IPR002898 MotA/TolQ/ExbB proton channel YPD4_0652 IPR022522 Flagellar motor stator, MotA YPD4_0652 IPR000540 Flagellar motor protein MotA, conserved site YPD4_0653 IPR006665 OmpA-like domain YPD4_0653 IPR025713 Motility protein B, N-terminal domain YPD4_0653 IPR036737 OmpA-like domain superfamily YPD4_0657 IPR012337 Ribonuclease H-like superfamily YPD4_0657 IPR036397 Ribonuclease H superfamily YPD4_0657 IPR038965 Transposase InsF-like YPD4_0657 IPR025948 HTH-like domain YPD4_0657 IPR001584 Integrase, catalytic core YPD4_0659 IPR028082 Periplasmic binding protein-like I YPD4_0659 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPD4_0659 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0659 IPR000843 LacI-type HTH domain YPD4_0660 IPR031312 Sodium/sulphate symporter, conserved site YPD4_0660 IPR001898 Solute carrier family 13 YPD4_0662 IPR001826 RHS protein YPD4_0662 IPR022385 Rhs repeat-associated core YPD4_0662 IPR031325 RHS repeat YPD4_0662 IPR006530 YD repeat YPD4_0664 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPD4_0664 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPD4_0664 IPR006531 Gp5 N-terminal YPD4_0664 IPR037026 Vgr protein, OB-fold domain superfamily YPD4_0665 IPR011050 Pectin lyase fold/virulence factor YPD4_0665 IPR036709 Autotransporter beta-domain superfamily YPD4_0665 IPR013425 Autotransporter-associated beta strand repeat YPD4_0665 IPR005546 Autotransporter beta-domain YPD4_0665 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_0665 IPR006315 Outer membrane autotransporter barrel YPD4_0666 IPR006315 Outer membrane autotransporter barrel YPD4_0666 IPR011050 Pectin lyase fold/virulence factor YPD4_0666 IPR013425 Autotransporter-associated beta strand repeat YPD4_0666 IPR036709 Autotransporter beta-domain superfamily YPD4_0666 IPR005546 Autotransporter beta-domain YPD4_0666 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_0667 IPR005546 Autotransporter beta-domain YPD4_0667 IPR006315 Outer membrane autotransporter barrel YPD4_0667 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_0667 IPR011050 Pectin lyase fold/virulence factor YPD4_0667 IPR036709 Autotransporter beta-domain superfamily YPD4_0667 IPR013425 Autotransporter-associated beta strand repeat YPD4_0669 IPR003474 Gluconate transporter YPD4_0672 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0672 IPR039421 Type I protein exporter YPD4_0672 IPR017871 ABC transporter, conserved site YPD4_0672 IPR003439 ABC transporter-like YPD4_0672 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_0672 IPR011917 ABC transporter, lipid A export, MsbA YPD4_0672 IPR011527 ABC transporter type 1, transmembrane domain YPD4_0672 IPR003593 AAA+ ATPase domain YPD4_0673 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_0673 IPR007037 Siderophore-interacting protein, C-terminal domain YPD4_0673 IPR011527 ABC transporter type 1, transmembrane domain YPD4_0673 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0673 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_0673 IPR013113 FAD-binding 9, siderophore-interacting YPD4_0673 IPR017871 ABC transporter, conserved site YPD4_0673 IPR003439 ABC transporter-like YPD4_0673 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_0673 IPR003593 AAA+ ATPase domain YPD4_0673 IPR017938 Riboflavin synthase-like beta-barrel YPD4_0675 IPR001031 Thioesterase YPD4_0675 IPR029058 Alpha/Beta hydrolase fold YPD4_0675 IPR020802 Polyketide synthase, thioesterase domain YPD4_0675 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_0675 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPD4_0678 IPR013217 Methyltransferase type 12 YPD4_0678 IPR009081 Phosphopantetheine binding ACP domain YPD4_0678 IPR006162 Phosphopantetheine attachment site YPD4_0678 IPR001242 Condensation domain YPD4_0678 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0678 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_0678 IPR042099 AMP-dependent synthetase-like superfamily YPD4_0678 IPR000873 AMP-dependent synthetase/ligase YPD4_0678 IPR020845 AMP-binding, conserved site YPD4_0678 IPR036736 ACP-like superfamily YPD4_0678 IPR010071 Amino acid adenylation domain YPD4_0678 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPD4_0679 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_0679 IPR000873 AMP-dependent synthetase/ligase YPD4_0679 IPR001242 Condensation domain YPD4_0679 IPR042099 AMP-dependent synthetase-like superfamily YPD4_0679 IPR020845 AMP-binding, conserved site YPD4_0679 IPR025110 AMP-binding enzyme, C-terminal domain YPD4_0679 IPR036736 ACP-like superfamily YPD4_0679 IPR010071 Amino acid adenylation domain YPD4_0679 IPR009081 Phosphopantetheine binding ACP domain YPD4_0680 IPR013217 Methyltransferase type 12 YPD4_0680 IPR010071 Amino acid adenylation domain YPD4_0680 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPD4_0680 IPR036736 ACP-like superfamily YPD4_0680 IPR020845 AMP-binding, conserved site YPD4_0680 IPR000873 AMP-dependent synthetase/ligase YPD4_0680 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_0680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0680 IPR006162 Phosphopantetheine attachment site YPD4_0680 IPR009081 Phosphopantetheine binding ACP domain YPD4_0680 IPR001242 Condensation domain YPD4_0680 IPR042099 AMP-dependent synthetase-like superfamily YPD4_0681 IPR003593 AAA+ ATPase domain YPD4_0681 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0681 IPR001270 ClpA/B family YPD4_0681 IPR002611 IstB-like ATP-binding protein YPD4_0681 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0682 IPR036397 Ribonuclease H superfamily YPD4_0682 IPR006120 Resolvase, HTH domain YPD4_0682 IPR001584 Integrase, catalytic core YPD4_0682 IPR017894 HTH domain, IS21 transposase-type YPD4_0682 IPR012337 Ribonuclease H-like superfamily YPD4_0683 IPR016039 Thiolase-like YPD4_0683 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0683 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0683 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0683 IPR006162 Phosphopantetheine attachment site YPD4_0683 IPR009081 Phosphopantetheine binding ACP domain YPD4_0683 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPD4_0683 IPR032821 Ketoacyl-synthetase, C-terminal extension YPD4_0683 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_0683 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_0683 IPR042099 AMP-dependent synthetase-like superfamily YPD4_0683 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_0683 IPR036736 ACP-like superfamily YPD4_0683 IPR001242 Condensation domain YPD4_0683 IPR005814 Aminotransferase class-III YPD4_0683 IPR025110 AMP-binding enzyme, C-terminal domain YPD4_0683 IPR020845 AMP-binding, conserved site YPD4_0683 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_0683 IPR000873 AMP-dependent synthetase/ligase YPD4_0683 IPR010071 Amino acid adenylation domain YPD4_0683 IPR018201 Beta-ketoacyl synthase, active site YPD4_0684 IPR039426 Vitamin B12 transporter BtuB-like YPD4_0684 IPR010105 TonB-dependent siderophore receptor YPD4_0684 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_0684 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_0684 IPR012910 TonB-dependent receptor, plug domain YPD4_0685 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPD4_0685 IPR002933 Peptidase M20 YPD4_0685 IPR036264 Bacterial exopeptidase dimerisation domain YPD4_0685 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPD4_0685 IPR011650 Peptidase M20, dimerisation domain YPD4_0686 IPR011540 AbgT, Proteobacteria YPD4_0686 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT YPD4_0687 IPR029487 Novel E3 ligase domain YPD4_0687 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPD4_0687 IPR032675 Leucine-rich repeat domain superfamily YPD4_0688 IPR032675 Leucine-rich repeat domain superfamily YPD4_0688 IPR029487 Novel E3 ligase domain YPD4_0688 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPD4_0688 IPR029487 Novel E3 ligase domain YPD4_0688 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPD4_0688 IPR032675 Leucine-rich repeat domain superfamily YPD4_0689 IPR029487 Novel E3 ligase domain YPD4_0689 IPR032675 Leucine-rich repeat domain superfamily YPD4_0689 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPD4_0690 IPR006315 Outer membrane autotransporter barrel YPD4_0690 IPR011050 Pectin lyase fold/virulence factor YPD4_0690 IPR005546 Autotransporter beta-domain YPD4_0690 IPR036709 Autotransporter beta-domain superfamily YPD4_0692 IPR002110 Ankyrin repeat YPD4_0692 IPR012927 ShET2 enterotoxin, N-terminal YPD4_0692 IPR036770 Ankyrin repeat-containing domain superfamily YPD4_0693 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_0693 IPR001036 Acriflavin resistance protein YPD4_0693 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPD4_0694 IPR006143 RND efflux pump, membrane fusion protein YPD4_0694 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_0695 IPR000014 PAS domain YPD4_0695 IPR035965 PAS domain superfamily YPD4_0695 IPR005330 MHYT domain YPD4_0695 IPR029787 Nucleotide cyclase YPD4_0695 IPR001633 EAL domain YPD4_0695 IPR000160 GGDEF domain YPD4_0695 IPR035919 EAL domain superfamily YPD4_0696 IPR001584 Integrase, catalytic core YPD4_0696 IPR036397 Ribonuclease H superfamily YPD4_0696 IPR012337 Ribonuclease H-like superfamily YPD4_0696 IPR025948 HTH-like domain YPD4_0696 IPR038965 Transposase InsF-like YPD4_0698 IPR001927 Sodium:galactoside symporter YPD4_0698 IPR020846 Major facilitator superfamily domain YPD4_0698 IPR036259 MFS transporter superfamily YPD4_0698 IPR018043 Sodium:galactoside symporter, conserved site YPD4_0698 IPR039672 Lactose permease-like YPD4_0699 IPR012910 TonB-dependent receptor, plug domain YPD4_0699 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_0699 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_0699 IPR010916 TonB box, conserved site YPD4_0699 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_0699 IPR010917 TonB-dependent receptor, conserved site YPD4_0699 IPR010105 TonB-dependent siderophore receptor YPD4_0699 IPR039426 Vitamin B12 transporter BtuB-like YPD4_0700 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPD4_0700 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0701 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPD4_0701 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPD4_0701 IPR022770 Ferric iron reductase FhuF domain YPD4_0702 IPR016181 Acyl-CoA N-acyltransferase YPD4_0702 IPR019432 Siderophore biosynthesis protein, conserved domain YPD4_0703 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPD4_0703 IPR022770 Ferric iron reductase FhuF domain YPD4_0703 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPD4_0704 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPD4_0704 IPR022770 Ferric iron reductase FhuF domain YPD4_0704 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPD4_0708 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_0708 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPD4_0708 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPD4_0708 IPR000792 Transcription regulator LuxR, C-terminal YPD4_0708 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0709 IPR001690 Autoinducer synthase YPD4_0709 IPR018311 Autoinducer synthesis, conserved site YPD4_0709 IPR016181 Acyl-CoA N-acyltransferase YPD4_0710 IPR003675 CAAX prenyl protease 2 YPD4_0717 IPR006664 Outer membrane protein, bacterial YPD4_0717 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_0717 IPR028974 TSP type-3 repeat YPD4_0717 IPR008722 Outer membrane porin F, N-terminal YPD4_0717 IPR006690 Outer membrane protein, OmpA-like, conserved site YPD4_0717 IPR006665 OmpA-like domain YPD4_0717 IPR036737 OmpA-like domain superfamily YPD4_0719 IPR036628 Clp, N-terminal domain superfamily YPD4_0719 IPR003593 AAA+ ATPase domain YPD4_0719 IPR003959 ATPase, AAA-type, core YPD4_0719 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0719 IPR041546 ClpA/ClpB, AAA lid domain YPD4_0719 IPR018368 ClpA/B, conserved site 1 YPD4_0719 IPR001270 ClpA/B family YPD4_0719 IPR017729 Type VI secretion system, ATPase ClpV1 YPD4_0719 IPR019489 Clp ATPase, C-terminal YPD4_0719 IPR004176 Clp, N-terminal YPD4_0723 IPR005063 Transposase, IS1 YPD4_0725 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPD4_0725 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0725 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPD4_0725 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0725 IPR011006 CheY-like superfamily YPD4_0725 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0725 IPR011193 Ornithine/lysine/arginine decarboxylase YPD4_0725 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPD4_0725 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPD4_0725 IPR027464 Ornithine decarboxylase, N-terminal YPD4_0726 IPR028082 Periplasmic binding protein-like I YPD4_0726 IPR025997 Periplasmic binding protein YPD4_0727 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0727 IPR017871 ABC transporter, conserved site YPD4_0727 IPR003439 ABC transporter-like YPD4_0727 IPR003593 AAA+ ATPase domain YPD4_0727 IPR015861 ABC transporter, ribose import, RbsA YPD4_0728 IPR001851 ABC transporter, permease YPD4_0729 IPR039423 TonB-dependent receptor-like YPD4_0729 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_0729 IPR012910 TonB-dependent receptor, plug domain YPD4_0731 IPR000189 Prokaryotic transglycosylase, active site YPD4_0731 IPR008258 Transglycosylase SLT domain 1 YPD4_0731 IPR023664 Murein transglycosylase-C YPD4_0731 IPR023346 Lysozyme-like domain superfamily YPD4_0731 IPR024570 Murein transglycosylase-C, N-terminal YPD4_0732 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPD4_0732 IPR004036 Endonuclease III-like, conserved site-2 YPD4_0732 IPR005760 A/G-specific adenine glycosylase MutY YPD4_0732 IPR003265 HhH-GPD domain YPD4_0732 IPR000445 Helix-hairpin-helix motif YPD4_0732 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPD4_0732 IPR029119 MutY, C-terminal YPD4_0732 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_0732 IPR011257 DNA glycosylase YPD4_0732 IPR004035 Endonuclease III, iron-sulphur binding site YPD4_0733 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type YPD4_0733 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0734 IPR007416 Protein of unknown function DUF469 YPD4_0735 IPR015868 Glutaminase YPD4_0735 IPR012338 Beta-lactamase/transpeptidase-like YPD4_0736 IPR021307 Protein of unknown function DUF2884 YPD4_0737 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain YPD4_0737 IPR032074 Actin cross-linking domain YPD4_0737 IPR011509 RtxA toxin YPD4_0737 IPR029058 Alpha/Beta hydrolase fold YPD4_0737 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily YPD4_0737 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPD4_0737 IPR022742 Serine aminopeptidase, S33 YPD4_0737 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_0738 IPR023404 Radical SAM, alpha/beta horseshoe YPD4_0738 IPR007197 Radical SAM YPD4_0738 IPR004559 Heme chaperone HemW-like YPD4_0738 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPD4_0738 IPR010723 HemN, C-terminal YPD4_0738 IPR006638 Elp3/MiaB/NifB YPD4_0739 IPR020922 dITP/XTP pyrophosphatase YPD4_0739 IPR002637 Ham1-like protein YPD4_0739 IPR029001 Inosine triphosphate pyrophosphatase-like YPD4_0740 IPR005228 Conserved hypothetical protein CHP00251 YPD4_0740 IPR003746 Protein of unknown function DUF167 YPD4_0740 IPR036591 YggU-like superfamily YPD4_0741 IPR003425 CCB3/YggT YPD4_0742 IPR036291 NAD(P)-binding domain superfamily YPD4_0742 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YPD4_0742 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPD4_0742 IPR000304 Pyrroline-5-carboxylate reductase YPD4_0742 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_0743 IPR029066 PLP-binding barrel YPD4_0743 IPR001608 Alanine racemase, N-terminal YPD4_0743 IPR011078 Pyridoxal phosphate homeostasis protein YPD4_0744 IPR001482 Type II/IV secretion system protein YPD4_0744 IPR006321 Pilus retraction protein PilT YPD4_0744 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0744 IPR003593 AAA+ ATPase domain YPD4_0745 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YPD4_0745 IPR017754 Agmatine deiminase YPD4_0746 IPR023719 Aliphatic amidase YPD4_0746 IPR036526 Carbon-nitrogen hydrolase superfamily YPD4_0746 IPR003010 Carbon-nitrogen hydrolase YPD4_0747 IPR037027 YqgF/RNase H-like domain superfamily YPD4_0747 IPR006641 YqgF/RNase H-like domain YPD4_0747 IPR012337 Ribonuclease H-like superfamily YPD4_0747 IPR005227 Putative pre-16S rRNA nuclease YPD4_0748 IPR003774 Protein of unknown function UPF0301 YPD4_0749 IPR016185 Pre-ATP-grasp domain superfamily YPD4_0749 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YPD4_0749 IPR006284 Glutathione synthetase, prokaryotic YPD4_0749 IPR013815 ATP-grasp fold, subdomain 1 YPD4_0749 IPR011761 ATP-grasp fold YPD4_0749 IPR004215 Prokaryotic glutathione synthetase, N-terminal YPD4_0750 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_0750 IPR006700 Ribosomal RNA small subunit methyltransferase E YPD4_0750 IPR015947 PUA-like superfamily YPD4_0750 IPR029028 Alpha/beta knot methyltransferases YPD4_0751 IPR007346 Endonuclease I YPD4_0752 IPR006640 SprT-like YPD4_0752 IPR035240 SprT-like, zinc ribbon domain YPD4_0752 IPR023483 Uncharacterised protein family SprT YPD4_0753 IPR022628 S-adenosylmethionine synthetase, N-terminal YPD4_0753 IPR002133 S-adenosylmethionine synthetase YPD4_0753 IPR022636 S-adenosylmethionine synthetase superfamily YPD4_0753 IPR022631 S-adenosylmethionine synthetase, conserved site YPD4_0753 IPR022630 S-adenosylmethionine synthetase, C-terminal YPD4_0753 IPR022629 S-adenosylmethionine synthetase, central domain YPD4_0754 IPR040634 Arginine decarboxylase, helical bundle domain YPD4_0754 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPD4_0754 IPR029066 PLP-binding barrel YPD4_0754 IPR000183 Ornithine/DAP/Arg decarboxylase YPD4_0754 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPD4_0754 IPR002985 Arginine decarboxylase YPD4_0754 IPR041128 Arginine decarboxylase, C-terminal helical YPD4_0754 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPD4_0754 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPD4_0755 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPD4_0755 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPD4_0756 IPR001915 Peptidase M48 YPD4_0757 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPD4_0757 IPR005475 Transketolase-like, pyrimidine-binding domain YPD4_0757 IPR020826 Transketolase binding site YPD4_0757 IPR033248 Transketolase, C-terminal domain YPD4_0757 IPR033247 Transketolase family YPD4_0757 IPR005478 Transketolase, bacterial-like YPD4_0757 IPR005474 Transketolase, N-terminal YPD4_0757 IPR029061 Thiamin diphosphate-binding fold YPD4_0759 IPR036291 NAD(P)-binding domain superfamily YPD4_0759 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPD4_0759 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPD4_0759 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPD4_0759 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPD4_0759 IPR006422 D-erythrose-4-phosphate dehydrogenase YPD4_0760 IPR015824 Phosphoglycerate kinase, N-terminal YPD4_0760 IPR001576 Phosphoglycerate kinase YPD4_0760 IPR036043 Phosphoglycerate kinase superfamily YPD4_0760 IPR015911 Phosphoglycerate kinase, conserved site YPD4_0761 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YPD4_0761 IPR000771 Fructose-bisphosphate aldolase, class-II YPD4_0761 IPR013785 Aldolase-type TIM barrel YPD4_0762 IPR006686 Mechanosensitive ion channel MscS, conserved site YPD4_0762 IPR008910 Conserved TM helix YPD4_0762 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPD4_0762 IPR010920 LSM domain superfamily YPD4_0762 IPR006685 Mechanosensitive ion channel MscS YPD4_0762 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPD4_0762 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPD4_0763 IPR023445 Arginine exporter protein ArgO, enterobacteria YPD4_0763 IPR001123 Amino acid exporter protein, LeuE-type YPD4_0763 IPR004777 L-lysine exporter/arginine exporter YPD4_0764 IPR007497 Protein of unknown function DUF541 YPD4_0765 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0765 IPR000847 Transcription regulator HTH, LysR YPD4_0765 IPR005119 LysR, substrate-binding YPD4_0765 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YPD4_0765 IPR017685 HTH-type transcriptional regulator ArgP YPD4_0765 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0766 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPD4_0766 IPR004788 Ribose 5-phosphate isomerase, type A YPD4_0766 IPR037171 NagB/RpiA transferase-like YPD4_0767 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPD4_0767 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPD4_0767 IPR036291 NAD(P)-binding domain superfamily YPD4_0767 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPD4_0767 IPR002912 ACT domain YPD4_0767 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPD4_0768 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily YPD4_0768 IPR037171 NagB/RpiA transferase-like YPD4_0768 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPD4_0769 IPR007838 Cell division protein ZapA-like YPD4_0769 IPR036192 Cell division protein ZapA-like superfamily YPD4_0769 IPR023771 Cell division protein ZapA, eubacteria YPD4_0770 IPR036255 YgfB-like superfamily YPD4_0770 IPR011978 Uncharacterised protein family UPF0149 YPD4_0771 IPR007865 Aminopeptidase P, N-terminal YPD4_0771 IPR036005 Creatinase/aminopeptidase-like YPD4_0771 IPR000994 Peptidase M24 YPD4_0771 IPR001714 Peptidase M24, methionine aminopeptidase YPD4_0771 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPD4_0771 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPD4_0772 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0772 IPR002938 FAD-binding domain YPD4_0772 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPD4_0772 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YPD4_0772 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPD4_0773 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0773 IPR002938 FAD-binding domain YPD4_0773 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPD4_0773 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPD4_0774 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPD4_0774 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPD4_0774 IPR022903 Glycine cleavage system T protein, bacteria YPD4_0774 IPR006223 Glycine cleavage system T protein YPD4_0774 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YPD4_0774 IPR028896 Aminomethyltransferase-like YPD4_0774 IPR006222 Aminomethyltransferase, folate-binding domain YPD4_0775 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPD4_0775 IPR017453 Glycine cleavage system H-protein, subgroup YPD4_0775 IPR033753 Glycine cleavage system H-protein/Simiate YPD4_0775 IPR011053 Single hybrid motif YPD4_0775 IPR002930 Glycine cleavage system H-protein YPD4_0775 IPR000089 Biotin/lipoyl attachment YPD4_0776 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0776 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0776 IPR020581 Glycine cleavage system P protein YPD4_0776 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0776 IPR003437 Glycine dehydrogenase (decarboxylating) YPD4_0778 IPR005594 YadA-like, C-terminal YPD4_0778 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_0778 IPR024973 ESPR domain YPD4_0778 IPR008640 Head domain of trimeric autotransporter adhesin YPD4_0778 IPR005594 YadA-like, C-terminal YPD4_0778 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPD4_0778 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_0778 IPR024973 ESPR domain YPD4_0778 IPR008640 Head domain of trimeric autotransporter adhesin YPD4_0778 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPD4_0780 IPR005744 Hly-III YPD4_0780 IPR004254 AdipoR/Haemolysin-III-related YPD4_0782 IPR006222 Aminomethyltransferase, folate-binding domain YPD4_0782 IPR023758 tRNA-modifying protein YgfZ YPD4_0782 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPD4_0782 IPR017703 YgfZ/GcvT conserved site YPD4_0783 IPR009883 Inner membrane protein YgfX YPD4_0784 IPR039420 Transcriptional regulatory protein WalR-like YPD4_0784 IPR011006 CheY-like superfamily YPD4_0784 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_0784 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0784 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_0784 IPR001789 Signal transduction response regulator, receiver domain YPD4_0785 IPR029151 Periplasmic sensor-like domain superfamily YPD4_0785 IPR003660 HAMP domain YPD4_0785 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_0785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_0785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_0785 IPR005467 Histidine kinase domain YPD4_0785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_0785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_0786 IPR010364 Uncharacterised protein family, inner membrane CreD YPD4_0787 IPR008254 Flavodoxin/nitric oxide synthase YPD4_0787 IPR029039 Flavoprotein-like superfamily YPD4_0787 IPR010086 Flavodoxin, long chain YPD4_0787 IPR001226 Flavodoxin, conserved site YPD4_0788 IPR002104 Integrase, catalytic domain YPD4_0788 IPR023009 Tyrosine recombinase XerC/XerD YPD4_0788 IPR011932 Tyrosine recombinase XerD YPD4_0788 IPR004107 Integrase, SAM-like, N-terminal YPD4_0788 IPR010998 Integrase/recombinase, N-terminal YPD4_0788 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_0788 IPR013762 Integrase-like, catalytic domain superfamily YPD4_0789 IPR013766 Thioredoxin domain YPD4_0789 IPR017937 Thioredoxin, conserved site YPD4_0789 IPR036249 Thioredoxin-like superfamily YPD4_0789 IPR012336 Thioredoxin-like fold YPD4_0789 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily YPD4_0789 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPD4_0789 IPR033954 Disulphide bond isomerase, DsbC/G YPD4_0790 IPR003156 DHHA1 domain YPD4_0790 IPR001667 DDH domain YPD4_0790 IPR004610 Bacterial RecJ exonuclease YPD4_0790 IPR038763 DHH phosphoesterase superfamily YPD4_0790 IPR041122 RecJ, OB domain YPD4_0791 IPR005139 Peptide chain release factor YPD4_0791 IPR000352 Peptide chain release factor class I YPD4_0791 IPR004374 Peptide chain release factor 2 YPD4_0792 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPD4_0792 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPD4_0792 IPR012340 Nucleic acid-binding, OB-fold YPD4_0792 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPD4_0792 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II YPD4_0792 IPR002313 Lysine-tRNA ligase, class II YPD4_0792 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_0793 IPR013762 Integrase-like, catalytic domain superfamily YPD4_0793 IPR004107 Integrase, SAM-like, N-terminal YPD4_0793 IPR010998 Integrase/recombinase, N-terminal YPD4_0793 IPR025166 Integrase, DNA-binding domain YPD4_0793 IPR038488 Integrase, DNA-binding domain superfamily YPD4_0793 IPR002104 Integrase, catalytic domain YPD4_0793 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_0795 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0795 IPR022453 Zinc finger, MqsA-type YPD4_0795 IPR032758 Antitoxin MqsA/HigA-2 YPD4_0795 IPR022452 Antitoxin MqsA YPD4_0795 IPR001387 Cro/C1-type helix-turn-helix domain YPD4_0807 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0807 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0807 IPR005149 Transcription regulator PadR, N-terminal YPD4_0808 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YPD4_0808 IPR038765 Papain-like cysteine peptidase superfamily YPD4_0810 IPR028082 Periplasmic binding protein-like I YPD4_0810 IPR025997 Periplasmic binding protein YPD4_0811 IPR001851 ABC transporter, permease YPD4_0812 IPR003439 ABC transporter-like YPD4_0812 IPR003593 AAA+ ATPase domain YPD4_0812 IPR015861 ABC transporter, ribose import, RbsA YPD4_0812 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0812 IPR017871 ABC transporter, conserved site YPD4_0813 IPR003439 ABC transporter-like YPD4_0813 IPR003593 AAA+ ATPase domain YPD4_0813 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0813 IPR040582 MalK, OB fold domain YPD4_0813 IPR017871 ABC transporter, conserved site YPD4_0813 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_0814 IPR006059 Bacterial extracellular solute-binding protein YPD4_0814 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPD4_0815 IPR035906 MetI-like superfamily YPD4_0815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0816 IPR035906 MetI-like superfamily YPD4_0816 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0817 IPR017853 Glycoside hydrolase superfamily YPD4_0817 IPR011683 Glycosyl hydrolase family 53 YPD4_0818 IPR003476 Glycoside hydrolase, family 42 YPD4_0818 IPR013529 Glycoside hydrolase, family 42, N-terminal YPD4_0818 IPR017853 Glycoside hydrolase superfamily YPD4_0818 IPR013780 Glycosyl hydrolase, all-beta YPD4_0818 IPR013739 Beta-galactosidase C-terminal YPD4_0818 IPR029062 Class I glutamine amidotransferase-like YPD4_0818 IPR013738 Beta-galactosidase trimerisation YPD4_0819 IPR001996 Phosphotransferase system, IIB component, type 1 YPD4_0819 IPR036878 Glucose permease domain IIB YPD4_0819 IPR013013 Phosphotransferase system, EIIC component, type 1 YPD4_0819 IPR011299 PTS system glucose-specific IIBC component YPD4_0819 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPD4_0819 IPR003352 Phosphotransferase system, EIIC YPD4_0820 IPR023738 Maltoporin YPD4_0820 IPR036998 Porin, LamB-type superfamily YPD4_0820 IPR003192 Porin, LamB-type YPD4_0821 IPR028082 Periplasmic binding protein-like I YPD4_0821 IPR000843 LacI-type HTH domain YPD4_0821 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0822 IPR000322 Glycoside hydrolase family 31 YPD4_0822 IPR030458 Glycosyl hydrolases family 31, active site YPD4_0822 IPR030459 Glycosyl hydrolases family 31, conserved site YPD4_0822 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPD4_0822 IPR013780 Glycosyl hydrolase, all-beta YPD4_0822 IPR017853 Glycoside hydrolase superfamily YPD4_0822 IPR011013 Galactose mutarotase-like domain superfamily YPD4_0822 IPR033403 Domain of unknown function DUF5110 YPD4_0822 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 YPD4_0823 IPR036259 MFS transporter superfamily YPD4_0823 IPR020846 Major facilitator superfamily domain YPD4_0823 IPR011701 Major facilitator superfamily YPD4_0824 IPR000843 LacI-type HTH domain YPD4_0824 IPR023588 Transcription regulator HTH, PurR YPD4_0824 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0824 IPR028082 Periplasmic binding protein-like I YPD4_0826 IPR000771 Fructose-bisphosphate aldolase, class-II YPD4_0826 IPR013785 Aldolase-type TIM barrel YPD4_0826 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YPD4_0826 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY YPD4_0828 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_0828 IPR024607 Sulfatase, conserved site YPD4_0828 IPR000917 Sulfatase, N-terminal YPD4_0829 IPR013785 Aldolase-type TIM barrel YPD4_0829 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPD4_0829 IPR023885 4Fe4S-binding SPASM domain YPD4_0829 IPR007197 Radical SAM YPD4_0831 IPR036291 NAD(P)-binding domain superfamily YPD4_0831 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPD4_0831 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_0831 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_0832 IPR006680 Amidohydrolase-related YPD4_0832 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPD4_0832 IPR032466 Metal-dependent hydrolase YPD4_0832 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPD4_0833 IPR004701 Phosphotransferase system, mannose-type IIA component YPD4_0833 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPD4_0833 IPR033887 PTS system mannose/sorbose specific IIA subunit YPD4_0834 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPD4_0835 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPD4_0836 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPD4_0836 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPD4_0836 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPD4_0837 IPR035466 GlmS/AgaS, SIS domain 1 YPD4_0837 IPR001347 Sugar isomerase (SIS) YPD4_0837 IPR014180 Sugar isomerase, AgaS YPD4_0837 IPR035464 AgaS, SIS domain YPD4_0838 IPR013785 Aldolase-type TIM barrel YPD4_0838 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ YPD4_0838 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like YPD4_0839 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPD4_0839 IPR037171 NagB/RpiA transferase-like YPD4_0839 IPR001034 DeoR-type HTH domain YPD4_0839 IPR014036 DeoR C-terminal sensor domain YPD4_0839 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0839 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0840 IPR000917 Sulfatase, N-terminal YPD4_0840 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_0841 IPR036515 Transposase IS200-like superfamily YPD4_0841 IPR002686 Transposase IS200-like YPD4_0842 IPR017894 HTH domain, IS21 transposase-type YPD4_0842 IPR036397 Ribonuclease H superfamily YPD4_0842 IPR001584 Integrase, catalytic core YPD4_0842 IPR006120 Resolvase, HTH domain YPD4_0842 IPR012337 Ribonuclease H-like superfamily YPD4_0843 IPR003593 AAA+ ATPase domain YPD4_0843 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0843 IPR001270 ClpA/B family YPD4_0843 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0843 IPR002611 IstB-like ATP-binding protein YPD4_0844 IPR024200 Chondroitin sulfate ABC endolyase YPD4_0844 IPR008929 Chondroitin AC/alginate lyase YPD4_0844 IPR039174 Chondroitin sulfate ABC lyase YPD4_0844 IPR003159 Polysaccharide lyase family 8, central domain YPD4_0844 IPR011013 Galactose mutarotase-like domain superfamily YPD4_0844 IPR011071 Polysaccharide lyase family 8-like, C-terminal YPD4_0844 IPR015176 Lyase, N-terminal YPD4_0844 IPR004103 Polysaccharide lyase family 8, C-terminal YPD4_0844 IPR015177 Lyase, catalytic YPD4_0844 IPR008979 Galactose-binding-like domain superfamily YPD4_0844 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPD4_0847 IPR036874 Carbonic anhydrase superfamily YPD4_0847 IPR001765 Carbonic anhydrase YPD4_0847 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPD4_0850 IPR004845 Type II secretion system GspD, conserved site YPD4_0850 IPR004846 Type II/III secretion system YPD4_0850 IPR038591 NolW-like superfamily YPD4_0850 IPR005644 NolW-like YPD4_0850 IPR001775 GspD/PilQ family YPD4_0850 IPR013356 Type II secretion system GspD YPD4_0852 IPR003004 GspF/PilC family YPD4_0852 IPR011850 General secretion pathway protein F YPD4_0852 IPR001992 Type II secretion system conserved site YPD4_0852 IPR018076 Type II secretion system F domain YPD4_0852 IPR042094 Type II secretion system F domain superfamily YPD4_0853 IPR000983 Bacterial general secretion pathway protein G-type pilin YPD4_0853 IPR012902 Prokaryotic N-terminal methylation site YPD4_0853 IPR010054 General secretion pathway protein G YPD4_0853 IPR013545 Type II secretion system protein G YPD4_0858 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPD4_0858 IPR014032 Peptidase A24A, prepilin type IV, bacterial YPD4_0858 IPR010627 Peptidase A24A, N-terminal YPD4_0861 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_0861 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPD4_0861 IPR003660 HAMP domain YPD4_0861 IPR004090 Chemotaxis methyl-accepting receptor YPD4_0861 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPD4_0861 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPD4_0864 IPR000847 Transcription regulator HTH, LysR YPD4_0864 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0864 IPR005119 LysR, substrate-binding YPD4_0864 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0865 IPR020846 Major facilitator superfamily domain YPD4_0865 IPR011701 Major facilitator superfamily YPD4_0865 IPR036259 MFS transporter superfamily YPD4_0866 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0866 IPR000847 Transcription regulator HTH, LysR YPD4_0866 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0866 IPR005119 LysR, substrate-binding YPD4_0866 IPR037414 Transcriptional activator protein LysR, PBP2 domain YPD4_0867 IPR029066 PLP-binding barrel YPD4_0867 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPD4_0867 IPR002986 Diaminopimelate decarboxylase, LysA YPD4_0867 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPD4_0867 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPD4_0867 IPR000183 Ornithine/DAP/Arg decarboxylase YPD4_0867 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPD4_0867 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPD4_0868 IPR028082 Periplasmic binding protein-like I YPD4_0868 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_0868 IPR000843 LacI-type HTH domain YPD4_0869 IPR006656 Molybdopterin oxidoreductase YPD4_0869 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase YPD4_0869 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_0869 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_0869 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPD4_0870 IPR042099 AMP-dependent synthetase-like superfamily YPD4_0870 IPR002123 Phospholipid/glycerol acyltransferase YPD4_0870 IPR020845 AMP-binding, conserved site YPD4_0870 IPR023775 Bifunctional protein Aas YPD4_0870 IPR000873 AMP-dependent synthetase/ligase YPD4_0870 IPR025110 AMP-binding enzyme, C-terminal domain YPD4_0871 IPR023727 Lysophospholipid transporter LplT YPD4_0871 IPR036259 MFS transporter superfamily YPD4_0871 IPR011701 Major facilitator superfamily YPD4_0872 IPR023210 NADP-dependent oxidoreductase domain YPD4_0872 IPR020471 Aldo/keto reductase YPD4_0872 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_0873 IPR011335 Restriction endonuclease type II-like YPD4_0873 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily YPD4_0873 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YPD4_0873 IPR004230 DNA mismatch repair protein MutH YPD4_0874 IPR020476 NUDIX hydrolase YPD4_0874 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_0874 IPR020084 NUDIX hydrolase, conserved site YPD4_0874 IPR000086 NUDIX hydrolase domain YPD4_0874 IPR022927 RNA pyrophosphohydrolase RppH YPD4_0875 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_0875 IPR036618 PtsI, HPr-binding domain superfamily YPD4_0875 IPR006318 Phosphotransferase system, enzyme I-like YPD4_0875 IPR008279 PEP-utilising enzyme, mobile domain YPD4_0875 IPR003018 GAF domain YPD4_0875 IPR000121 PEP-utilising enzyme, C-terminal YPD4_0875 IPR023151 PEP-utilising enzyme, conserved site YPD4_0875 IPR029016 GAF-like domain superfamily YPD4_0875 IPR036637 Phosphohistidine domain superfamily YPD4_0875 IPR008731 Phosphotransferase system, enzyme I N-terminal YPD4_0875 IPR018274 PEP-utilising enzyme, active site YPD4_0875 IPR040442 Pyruvate kinase-like domain superfamily YPD4_0876 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt YPD4_0877 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily YPD4_0877 IPR020940 Thymidylate synthase, active site YPD4_0877 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YPD4_0877 IPR000398 Thymidylate synthase YPD4_0878 IPR006120 Resolvase, HTH domain YPD4_0878 IPR036397 Ribonuclease H superfamily YPD4_0878 IPR017894 HTH domain, IS21 transposase-type YPD4_0878 IPR001584 Integrase, catalytic core YPD4_0878 IPR012337 Ribonuclease H-like superfamily YPD4_0879 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0879 IPR001270 ClpA/B family YPD4_0879 IPR002611 IstB-like ATP-binding protein YPD4_0879 IPR003593 AAA+ ATPase domain YPD4_0879 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0883 IPR013986 DExx box DNA helicase domain superfamily YPD4_0883 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0883 IPR006697 RecBCD enzyme subunit RecC YPD4_0883 IPR011335 Restriction endonuclease type II-like YPD4_0883 IPR041500 RecC, C-terminal YPD4_0884 IPR032632 Peptidase M16, middle/third domain YPD4_0884 IPR007863 Peptidase M16, C-terminal YPD4_0884 IPR001431 Peptidase M16, zinc-binding site YPD4_0884 IPR011765 Peptidase M16, N-terminal YPD4_0884 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPD4_0885 IPR000212 DNA helicase, UvrD/REP type YPD4_0885 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPD4_0885 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0885 IPR034739 UvrD/AddA helicase, N-terminal YPD4_0885 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type YPD4_0885 IPR014016 UvrD-like helicase, ATP-binding domain YPD4_0885 IPR004586 RecBCD enzyme subunit RecB YPD4_0885 IPR014017 UvrD-like DNA helicase, C-terminal YPD4_0885 IPR011335 Restriction endonuclease type II-like YPD4_0886 IPR014016 UvrD-like helicase, ATP-binding domain YPD4_0886 IPR011335 Restriction endonuclease type II-like YPD4_0886 IPR034739 UvrD/AddA helicase, N-terminal YPD4_0886 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type YPD4_0886 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPD4_0886 IPR000212 DNA helicase, UvrD/REP type YPD4_0886 IPR014017 UvrD-like DNA helicase, C-terminal YPD4_0886 IPR004586 RecBCD enzyme subunit RecB YPD4_0886 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0887 IPR003593 AAA+ ATPase domain YPD4_0887 IPR027785 UvrD-like helicase C-terminal domain YPD4_0887 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain YPD4_0887 IPR006344 RecBCD enzyme subunit RecD YPD4_0887 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0888 IPR036393 Acetylglutamate kinase-like superfamily YPD4_0888 IPR010167 Amino-acid N-acetyltransferase YPD4_0888 IPR016181 Acyl-CoA N-acyltransferase YPD4_0888 IPR033719 N-acetylglutamate synthase, kinase-like domain YPD4_0888 IPR000182 GNAT domain YPD4_0888 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_0889 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPD4_0889 IPR021731 AMIN domain YPD4_0889 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_0890 IPR005300 Lytic transglycosylase MltA, domain B YPD4_0890 IPR036908 RlpA-like domain superfamily YPD4_0890 IPR034654 MltA, 3D domain YPD4_0890 IPR010611 3D domain YPD4_0890 IPR026044 Membrane-bound lytic murein transglycosylase A YPD4_0891 IPR035985 Ubiquitin-activating enzyme YPD4_0891 IPR000594 THIF-type NAD/FAD binding fold YPD4_0892 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPD4_0892 IPR003808 Fe-S metabolism associated domain, SufE-like YPD4_0893 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_0893 IPR000192 Aminotransferase class V domain YPD4_0893 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_0893 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_0893 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_0893 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YPD4_0894 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0894 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0894 IPR000847 Transcription regulator HTH, LysR YPD4_0894 IPR005119 LysR, substrate-binding YPD4_0895 IPR006696 Protein of unknown function DUF423 YPD4_0896 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPD4_0896 IPR011224 Ribosomal RNA large subunit methyltransferase M YPD4_0896 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0896 IPR040739 RlmM ferredoxin-like domain YPD4_0897 IPR038969 Flap endonuclease YPD4_0897 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPD4_0897 IPR008918 Helix-hairpin-helix motif, class 2 YPD4_0897 IPR002421 5'-3' exonuclease, N-terminal YPD4_0897 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPD4_0897 IPR029060 PIN-like domain superfamily YPD4_0897 IPR022895 Flap endonuclease Xni YPD4_0897 IPR020045 DNA polymerase I-like, H3TH domain YPD4_0898 IPR031100 LOG family YPD4_0898 IPR021826 Domain of unknown function DUF3412 YPD4_0898 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal YPD4_0898 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily YPD4_0899 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YPD4_0899 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YPD4_0899 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YPD4_0900 IPR009948 Syd YPD4_0900 IPR038228 Syd superfamily YPD4_0901 IPR036515 Transposase IS200-like superfamily YPD4_0901 IPR002686 Transposase IS200-like YPD4_0902 IPR036814 YqcC-like superfamily YPD4_0902 IPR007384 Protein of unknown function UCP006257 YPD4_0902 IPR023376 YqcC-like domain YPD4_0903 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPD4_0903 IPR006145 Pseudouridine synthase, RsuA/RluA YPD4_0903 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_0904 IPR001094 Flavodoxin-like YPD4_0904 IPR008254 Flavodoxin/nitric oxide synthase YPD4_0904 IPR029039 Flavoprotein-like superfamily YPD4_0905 IPR020911 Uncharacterised protein family UPF0325 YPD4_0906 IPR011004 Trimeric LpxA-like superfamily YPD4_0906 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily YPD4_0906 IPR001451 Hexapeptide repeat YPD4_0906 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YPD4_0906 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YPD4_0906 IPR018357 Hexapeptide transferase, conserved site YPD4_0907 IPR002912 ACT domain YPD4_0907 IPR003607 HD/PDEase domain YPD4_0907 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme YPD4_0907 IPR002934 Polymerase, nucleotidyl transferase domain YPD4_0907 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPD4_0907 IPR006674 HD domain YPD4_0908 IPR001714 Peptidase M24, methionine aminopeptidase YPD4_0908 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPD4_0908 IPR000994 Peptidase M24 YPD4_0908 IPR036005 Creatinase/aminopeptidase-like YPD4_0909 IPR001865 Ribosomal protein S2 YPD4_0909 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YPD4_0909 IPR018130 Ribosomal protein S2, conserved site YPD4_0909 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily YPD4_0910 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPD4_0910 IPR036402 Elongation factor Ts, dimerisation domain superfamily YPD4_0910 IPR001816 Translation elongation factor EFTs/EF1B YPD4_0910 IPR009060 UBA-like superfamily YPD4_0910 IPR018101 Translation elongation factor Ts, conserved site YPD4_0911 IPR001816 Translation elongation factor EFTs/EF1B YPD4_0911 IPR009060 UBA-like superfamily YPD4_0911 IPR036402 Elongation factor Ts, dimerisation domain superfamily YPD4_0911 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPD4_0911 IPR018101 Translation elongation factor Ts, conserved site YPD4_0912 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_0912 IPR011817 Uridylate kinase YPD4_0912 IPR015963 Uridylate kinase, bacteria YPD4_0912 IPR036393 Acetylglutamate kinase-like superfamily YPD4_0913 IPR036191 RRF superfamily YPD4_0913 IPR023584 Ribosome recycling factor domain YPD4_0913 IPR002661 Ribosome recycling factor YPD4_0914 IPR036291 NAD(P)-binding domain superfamily YPD4_0914 IPR036169 DXP reductoisomerase, C-terminal domain superfamily YPD4_0914 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YPD4_0914 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YPD4_0914 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPD4_0914 IPR026877 DXP reductoisomerase C-terminal domain YPD4_0915 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YPD4_0915 IPR036424 Decaprenyl diphosphate synthase-like superfamily YPD4_0915 IPR001441 Decaprenyl diphosphate synthase-like YPD4_0916 IPR000374 Phosphatidate cytidylyltransferase YPD4_0917 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YPD4_0917 IPR008915 Peptidase M50 YPD4_0917 IPR036034 PDZ superfamily YPD4_0917 IPR041489 PDZ domain 6 YPD4_0917 IPR001478 PDZ domain YPD4_0918 IPR039910 Surface antigen D15-like YPD4_0918 IPR023707 Outer membrane protein assembly factor BamA YPD4_0918 IPR034746 POTRA domain YPD4_0918 IPR010827 POTRA domain, BamA/TamA-like YPD4_0918 IPR000184 Bacterial surface antigen (D15) YPD4_0919 IPR034746 POTRA domain YPD4_0919 IPR023707 Outer membrane protein assembly factor BamA YPD4_0919 IPR039910 Surface antigen D15-like YPD4_0919 IPR010827 POTRA domain, BamA/TamA-like YPD4_0919 IPR000184 Bacterial surface antigen (D15) YPD4_0920 IPR005632 Chaperone protein Skp YPD4_0920 IPR024930 Skp domain superfamily YPD4_0921 IPR011004 Trimeric LpxA-like superfamily YPD4_0921 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD YPD4_0921 IPR018357 Hexapeptide transferase, conserved site YPD4_0921 IPR001451 Hexapeptide repeat YPD4_0921 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YPD4_0922 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPD4_0922 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPD4_0922 IPR029069 HotDog domain superfamily YPD4_0923 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YPD4_0923 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily YPD4_0923 IPR018357 Hexapeptide transferase, conserved site YPD4_0923 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal YPD4_0923 IPR011004 Trimeric LpxA-like superfamily YPD4_0923 IPR001451 Hexapeptide repeat YPD4_0924 IPR003835 Glycosyl transferase, family 19 YPD4_0925 IPR022898 Ribonuclease HII YPD4_0925 IPR001352 Ribonuclease HII/HIII YPD4_0925 IPR024567 Ribonuclease HII/HIII domain YPD4_0925 IPR012337 Ribonuclease H-like superfamily YPD4_0925 IPR036397 Ribonuclease H superfamily YPD4_0926 IPR029460 DNA polymerase, helix-hairpin-helix motif YPD4_0926 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPD4_0926 IPR004013 PHP domain YPD4_0926 IPR004805 DNA polymerase III, alpha subunit YPD4_0926 IPR040982 DNA polymerase III alpha subunit finger domain YPD4_0926 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPD4_0926 IPR016195 Polymerase/histidinol phosphatase-like YPD4_0926 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain YPD4_0926 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain YPD4_0927 IPR029045 ClpP/crotonase-like domain superfamily YPD4_0927 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal YPD4_0927 IPR001095 Acetyl-CoA carboxylase, alpha subunit YPD4_0928 IPR037478 YwkD-like domain YPD4_0928 IPR037523 Vicinal oxygen chelate (VOC) domain YPD4_0928 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPD4_0928 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPD4_0929 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPD4_0929 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_0929 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain YPD4_0929 IPR012094 tRNA(Ile)-lysidine synthase YPD4_0929 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal YPD4_0929 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YPD4_0930 IPR009056 Cytochrome c-like domain YPD4_0930 IPR036909 Cytochrome c-like domain superfamily YPD4_0930 IPR008168 Cytochrome c, class IC YPD4_0931 IPR009822 YaeQ YPD4_0931 IPR011335 Restriction endonuclease type II-like YPD4_0931 IPR038590 YaeQ superfamily YPD4_0932 IPR000352 Peptide chain release factor class I YPD4_0933 IPR007298 Copper resistance lipoprotein NlpE YPD4_0933 IPR033450 NlpE, C-terminal OB domain YPD4_0933 IPR038139 NlpE, C-terminal domain superfamily YPD4_0934 IPR033730 Prokaryote proline-tRNA ligase core domain YPD4_0934 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YPD4_0934 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YPD4_0934 IPR002316 Proline-tRNA ligase, class IIa YPD4_0934 IPR036621 Anticodon-binding domain superfamily YPD4_0934 IPR004154 Anticodon-binding YPD4_0934 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_0934 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPD4_0934 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPD4_0934 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPD4_0935 IPR023370 TrmO-like, N-terminal domain YPD4_0935 IPR036413 YaeB-like superfamily YPD4_0935 IPR040372 YaeB-like YPD4_0935 IPR023368 Uncharacterised protein family UPF0066, conserved site YPD4_0935 IPR041369 TrmO, C-terminal YPD4_0935 IPR036414 YaeB, N-terminal domain superfamily YPD4_0936 IPR004872 Lipoprotein NlpA family YPD4_0937 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0937 IPR035906 MetI-like superfamily YPD4_0938 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0938 IPR003593 AAA+ ATPase domain YPD4_0938 IPR026253 Methionine import ATP-binding protein MetN YPD4_0938 IPR018449 NIL domain YPD4_0938 IPR003439 ABC transporter-like YPD4_0938 IPR017871 ABC transporter, conserved site YPD4_0938 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPD4_0938 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPD4_0938 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YPD4_0939 IPR006543 Histidinol-phosphate phosphatase YPD4_0939 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPD4_0939 IPR023214 HAD superfamily YPD4_0939 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPD4_0939 IPR036412 HAD-like superfamily YPD4_0940 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_0940 IPR023210 NADP-dependent oxidoreductase domain YPD4_0940 IPR018170 Aldo/keto reductase, conserved site YPD4_0940 IPR020471 Aldo/keto reductase YPD4_0942 IPR022958 Uncharacterised protein family UPF0294 YPD4_0942 IPR005135 Endonuclease/exonuclease/phosphatase YPD4_0942 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPD4_0943 IPR023346 Lysozyme-like domain superfamily YPD4_0943 IPR036779 LysM domain superfamily YPD4_0943 IPR018392 LysM domain YPD4_0943 IPR008258 Transglycosylase SLT domain 1 YPD4_0943 IPR000189 Prokaryotic transglycosylase, active site YPD4_0944 IPR001279 Metallo-beta-lactamase YPD4_0944 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain YPD4_0944 IPR017782 Hydroxyacylglutathione hydrolase YPD4_0944 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPD4_0944 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain YPD4_0945 IPR026669 Arsenite methyltransferase-like YPD4_0945 IPR013216 Methyltransferase type 11 YPD4_0945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_0946 IPR012337 Ribonuclease H-like superfamily YPD4_0946 IPR002156 Ribonuclease H domain YPD4_0946 IPR036397 Ribonuclease H superfamily YPD4_0946 IPR022892 Ribonuclease HI YPD4_0947 IPR012337 Ribonuclease H-like superfamily YPD4_0947 IPR013520 Exonuclease, RNase T/DNA polymerase III YPD4_0947 IPR006309 DNA polymerase 3, epsilon subunit YPD4_0947 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain YPD4_0947 IPR036397 Ribonuclease H superfamily YPD4_0948 IPR001248 Purine-cytosine permease YPD4_0948 IPR038271 Purine-cytosine permease superfamily YPD4_0948 IPR012681 Nucleobase cation symporter-1, NCS1 YPD4_0949 IPR001270 ClpA/B family YPD4_0949 IPR002611 IstB-like ATP-binding protein YPD4_0949 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0949 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0949 IPR003593 AAA+ ATPase domain YPD4_0950 IPR017894 HTH domain, IS21 transposase-type YPD4_0950 IPR012337 Ribonuclease H-like superfamily YPD4_0950 IPR006120 Resolvase, HTH domain YPD4_0950 IPR001584 Integrase, catalytic core YPD4_0950 IPR036397 Ribonuclease H superfamily YPD4_0951 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0951 IPR038724 Regulatory protein RepA YPD4_0956 IPR010998 Integrase/recombinase, N-terminal YPD4_0956 IPR025166 Integrase, DNA-binding domain YPD4_0956 IPR038488 Integrase, DNA-binding domain superfamily YPD4_0956 IPR002104 Integrase, catalytic domain YPD4_0956 IPR013762 Integrase-like, catalytic domain superfamily YPD4_0956 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_0958 IPR023620 Small protein B YPD4_0958 IPR000037 SsrA-binding protein YPD4_0958 IPR020081 SsrA-binding protein, conserved site YPD4_0959 IPR023393 START-like domain superfamily YPD4_0959 IPR005031 Coenzyme Q-binding protein COQ10, START domain YPD4_0960 IPR026592 Outer membrane protein assembly factor BamE YPD4_0960 IPR007450 Lipoprotein SmpA/OmlA YPD4_0960 IPR037873 BamE-like YPD4_0961 IPR004604 DNA recombination/repair protein RecN YPD4_0961 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0961 IPR003395 RecF/RecN/SMC, N-terminal YPD4_0962 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPD4_0962 IPR002504 NAD kinase YPD4_0962 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPD4_0962 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal YPD4_0963 IPR009012 GrpE nucleotide exchange factor, head YPD4_0963 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPD4_0963 IPR000740 GrpE nucleotide exchange factor YPD4_0964 IPR016143 Citrate synthase-like, small alpha subdomain YPD4_0964 IPR002020 Citrate synthase YPD4_0964 IPR016142 Citrate synthase-like, large alpha subdomain YPD4_0964 IPR019810 Citrate synthase active site YPD4_0964 IPR036969 Citrate synthase superfamily YPD4_0964 IPR010953 Citrate synthase, type I YPD4_0964 IPR024176 Citrate synthase, bacterial-type YPD4_0965 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPD4_0965 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YPD4_0965 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit YPD4_0966 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_0966 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPD4_0966 IPR011281 Succinate dehydrogenase, flavoprotein subunit YPD4_0966 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPD4_0966 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPD4_0966 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPD4_0966 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPD4_0966 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPD4_0967 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPD4_0967 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPD4_0967 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_0967 IPR012675 Beta-grasp domain superfamily YPD4_0967 IPR009051 Alpha-helical ferredoxin YPD4_0967 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_0967 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_0967 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_0968 IPR001017 Dehydrogenase, E1 component YPD4_0968 IPR029061 Thiamin diphosphate-binding fold YPD4_0968 IPR005475 Transketolase-like, pyrimidine-binding domain YPD4_0968 IPR011603 2-oxoglutarate dehydrogenase E1 component YPD4_0968 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily YPD4_0968 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain YPD4_0968 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal YPD4_0969 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPD4_0969 IPR000089 Biotin/lipoyl attachment YPD4_0969 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_0969 IPR036625 E3-binding domain superfamily YPD4_0969 IPR004167 Peripheral subunit-binding domain YPD4_0969 IPR011053 Single hybrid motif YPD4_0969 IPR006255 Dihydrolipoamide succinyltransferase YPD4_0969 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPD4_0970 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YPD4_0970 IPR005809 Succinate--CoA synthetase, beta subunit YPD4_0970 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPD4_0970 IPR013815 ATP-grasp fold, subdomain 1 YPD4_0970 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YPD4_0970 IPR011761 ATP-grasp fold YPD4_0970 IPR016102 Succinyl-CoA synthetase-like YPD4_0971 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPD4_0971 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site YPD4_0971 IPR005810 Succinyl-CoA ligase, alpha subunit YPD4_0971 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPD4_0971 IPR036291 NAD(P)-binding domain superfamily YPD4_0971 IPR016102 Succinyl-CoA synthetase-like YPD4_0971 IPR003781 CoA-binding YPD4_0972 IPR002585 Cytochrome ubiquinol oxidase subunit 1 YPD4_0973 IPR003317 Cytochrome ubiquinol oxidase subunit 2 YPD4_0974 IPR002898 MotA/TolQ/ExbB proton channel YPD4_0974 IPR014163 Tol-Pal system, TolQ YPD4_0975 IPR003400 Biopolymer transport protein ExbD/TolR YPD4_0975 IPR014168 Tol-Pal system protein TolR YPD4_0976 IPR014161 Tol-Pal system, TolA YPD4_0976 IPR014161 Tol-Pal system, TolA YPD4_0977 IPR007195 TolB, N-terminal YPD4_0977 IPR036752 TolB, N-terminal domain superfamily YPD4_0977 IPR011042 Six-bladed beta-propeller, TolB-like YPD4_0977 IPR011659 WD40-like Beta Propeller YPD4_0977 IPR014167 Tol-Pal system protein TolB YPD4_0978 IPR006665 OmpA-like domain YPD4_0978 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal YPD4_0978 IPR006664 Outer membrane protein, bacterial YPD4_0978 IPR006690 Outer membrane protein, OmpA-like, conserved site YPD4_0978 IPR036737 OmpA-like domain superfamily YPD4_0978 IPR039001 Peptidoglycan-associated lipoprotein YPD4_0979 IPR014162 Cell division coordinator CpoB, C-terminal YPD4_0979 IPR013026 Tetratricopeptide repeat-containing domain YPD4_0979 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_0979 IPR034706 Cell division coordinator CpoB YPD4_0979 IPR032519 YbgF, trimerisation domain YPD4_0979 IPR019734 Tetratricopeptide repeat YPD4_0980 IPR003473 Quinolinate synthetase A YPD4_0980 IPR036094 Quinolinate synthetase A superfamily YPD4_0980 IPR023513 Quinolinate synthase A, type 1 YPD4_0981 IPR006419 Nicotinamide mononucleotide transporter PnuC YPD4_0982 IPR027469 Cation efflux transmembrane domain superfamily YPD4_0982 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPD4_0982 IPR002524 Cation efflux protein YPD4_0982 IPR023500 Zinc transporter ZitB YPD4_0983 IPR006219 DHAP synthase, class 1 YPD4_0983 IPR013785 Aldolase-type TIM barrel YPD4_0983 IPR006218 DAHP synthetase I/KDSA YPD4_0984 IPR003593 AAA+ ATPase domain YPD4_0984 IPR001270 ClpA/B family YPD4_0984 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0984 IPR002611 IstB-like ATP-binding protein YPD4_0984 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_0985 IPR017894 HTH domain, IS21 transposase-type YPD4_0985 IPR036397 Ribonuclease H superfamily YPD4_0985 IPR006120 Resolvase, HTH domain YPD4_0985 IPR001584 Integrase, catalytic core YPD4_0985 IPR012337 Ribonuclease H-like superfamily YPD4_0986 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPD4_0986 IPR029033 Histidine phosphatase superfamily YPD4_0986 IPR013078 Histidine phosphatase superfamily, clade-1 YPD4_0986 IPR005952 Phosphoglycerate mutase 1 YPD4_0988 IPR011013 Galactose mutarotase-like domain superfamily YPD4_0988 IPR015443 Aldose 1-epimerase YPD4_0988 IPR013458 Aldose 1-epimerase, bacterial YPD4_0988 IPR018052 Aldose 1-epimerase, conserved site YPD4_0988 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPD4_0988 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPD4_0989 IPR000705 Galactokinase YPD4_0989 IPR019741 Galactokinase, conserved site YPD4_0989 IPR022963 Galactokinase, bacterial YPD4_0989 IPR013750 GHMP kinase, C-terminal domain YPD4_0989 IPR036554 GHMP kinase, C-terminal domain superfamily YPD4_0989 IPR006203 GHMP kinase, ATP-binding, conserved site YPD4_0989 IPR006206 Mevalonate/galactokinase YPD4_0989 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_0989 IPR006204 GHMP kinase N-terminal domain YPD4_0989 IPR019539 Galactokinase galactose-binding domain YPD4_0989 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_0990 IPR001937 Galactose-1-phosphate uridyl transferase, class I YPD4_0990 IPR036265 HIT-like superfamily YPD4_0990 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YPD4_0990 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YPD4_0990 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YPD4_0991 IPR016040 NAD(P)-binding domain YPD4_0991 IPR005886 UDP-glucose 4-epimerase YPD4_0991 IPR036291 NAD(P)-binding domain superfamily YPD4_0993 IPR003593 AAA+ ATPase domain YPD4_0993 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0993 IPR003439 ABC transporter-like YPD4_0994 IPR005116 Transport-associated OB, type 1 YPD4_0994 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_0994 IPR036390 Winged helix DNA-binding domain superfamily YPD4_0994 IPR003725 Molybdenum-binding protein ModE, N-terminal YPD4_0994 IPR016462 Molybdate-dependent transcriptional regulator ModE YPD4_0994 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_0994 IPR004606 Molybdenum-pterin binding YPD4_0994 IPR000847 Transcription regulator HTH, LysR YPD4_0995 IPR005950 Molybdate ABC transporter, substrate-binding protein YPD4_0996 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_0996 IPR035906 MetI-like superfamily YPD4_0996 IPR011867 Molybdate ABC transporter, permease protein YPD4_0997 IPR005116 Transport-associated OB, type 1 YPD4_0997 IPR011868 Molybdate ABC transporter, ATP-binding protein YPD4_0997 IPR015852 ABC transporter, molybdenum import, ModC YPD4_0997 IPR017871 ABC transporter, conserved site YPD4_0997 IPR003439 ABC transporter-like YPD4_0997 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_0997 IPR004606 Molybdenum-pterin binding YPD4_0997 IPR003593 AAA+ ATPase domain YPD4_0997 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_0998 IPR023214 HAD superfamily YPD4_0998 IPR000150 Cof family YPD4_0998 IPR036412 HAD-like superfamily YPD4_0998 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPD4_0999 IPR011045 Nitrous oxide reductase, N-terminal YPD4_0999 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPD4_0999 IPR022528 6-phosphogluconolactonase, YbhE-type YPD4_0999 IPR019405 Lactonase, 7-bladed beta propeller YPD4_1000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1000 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1000 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPD4_1000 IPR005814 Aminotransferase class-III YPD4_1000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1001 IPR005814 Aminotransferase class-III YPD4_1001 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPD4_1001 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1001 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1001 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1002 IPR006638 Elp3/MiaB/NifB YPD4_1002 IPR013785 Aldolase-type TIM barrel YPD4_1002 IPR010722 Biotin and thiamin synthesis-associated domain YPD4_1002 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YPD4_1002 IPR024177 Biotin synthase YPD4_1002 IPR007197 Radical SAM YPD4_1003 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YPD4_1003 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YPD4_1003 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1003 IPR004839 Aminotransferase, class I/classII YPD4_1003 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPD4_1003 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1003 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1004 IPR013216 Methyltransferase type 11 YPD4_1004 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1004 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YPD4_1005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1005 IPR004472 Dethiobiotin synthase BioD YPD4_1007 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1007 IPR001943 UVR domain YPD4_1007 IPR036876 UVR domain superfamily YPD4_1007 IPR001650 Helicase, C-terminal YPD4_1007 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_1007 IPR006935 Helicase/UvrB, N-terminal YPD4_1007 IPR041471 UvrB, interaction domain YPD4_1007 IPR004807 UvrABC system, subunit B YPD4_1007 IPR024759 UvrB, YAD/RRR-motif-containing domain YPD4_1008 IPR038136 Gluconeogenesis factor superfamily YPD4_1008 IPR010119 Gluconeogenesis factor YPD4_1008 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPD4_1009 IPR007197 Radical SAM YPD4_1009 IPR013785 Aldolase-type TIM barrel YPD4_1009 IPR006638 Elp3/MiaB/NifB YPD4_1009 IPR013483 Molybdenum cofactor biosynthesis protein A YPD4_1009 IPR010505 Molybdenum cofactor synthesis C-terminal YPD4_1009 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YPD4_1010 IPR023045 Molybdenum cofactor biosynthesis C YPD4_1010 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily YPD4_1010 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YPD4_1011 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily YPD4_1011 IPR003448 Molybdopterin biosynthesis MoaE YPD4_1012 IPR006214 Bax inhibitor 1-related YPD4_1013 IPR036515 Transposase IS200-like superfamily YPD4_1013 IPR002686 Transposase IS200-like YPD4_1014 IPR012132 Glucose-methanol-choline oxidoreductase YPD4_1014 IPR027424 Glucose Oxidase, domain 2 YPD4_1014 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_1014 IPR011533 Oxygen-dependent choline dehydrogenase YPD4_1014 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YPD4_1014 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YPD4_1015 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_1015 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_1015 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_1015 IPR015590 Aldehyde dehydrogenase domain YPD4_1015 IPR011264 Betaine aldehyde dehydrogenase YPD4_1015 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1015 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPD4_1016 IPR039538 BetI-type transcriptional repressor, C-terminal YPD4_1016 IPR001647 DNA-binding HTH domain, TetR-type YPD4_1016 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPD4_1016 IPR017757 Transcriptional repressor BetI YPD4_1016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPD4_1016 IPR009057 Homeobox-like domain superfamily YPD4_1017 IPR000060 BCCT transporter family YPD4_1017 IPR018093 BCCT transporter, conserved site YPD4_1018 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain YPD4_1018 IPR005119 LysR, substrate-binding YPD4_1018 IPR000847 Transcription regulator HTH, LysR YPD4_1018 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1018 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1020 IPR035994 Nucleoside phosphorylase superfamily YPD4_1020 IPR010943 Xanthosine phosphorylase YPD4_1020 IPR018099 Purine phosphorylase, family 2, conserved site YPD4_1020 IPR000845 Nucleoside phosphorylase domain YPD4_1020 IPR011268 Purine nucleoside phosphorylase YPD4_1021 IPR020846 Major facilitator superfamily domain YPD4_1021 IPR004740 Nucleoside:H+ symporter YPD4_1021 IPR036259 MFS transporter superfamily YPD4_1022 IPR002686 Transposase IS200-like YPD4_1022 IPR036515 Transposase IS200-like superfamily YPD4_1023 IPR036259 MFS transporter superfamily YPD4_1023 IPR004740 Nucleoside:H+ symporter YPD4_1023 IPR020846 Major facilitator superfamily domain YPD4_1024 IPR025961 Heavy-metal resistance protein YPD4_1025 IPR005467 Histidine kinase domain YPD4_1025 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_1025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_1025 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_1025 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_1025 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_1025 IPR029151 Periplasmic sensor-like domain superfamily YPD4_1026 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPD4_1026 IPR002078 RNA polymerase sigma factor 54 interaction domain YPD4_1026 IPR025944 Sigma-54 interaction domain, conserved site YPD4_1026 IPR003593 AAA+ ATPase domain YPD4_1026 IPR011006 CheY-like superfamily YPD4_1026 IPR009057 Homeobox-like domain superfamily YPD4_1026 IPR002197 DNA binding HTH domain, Fis-type YPD4_1026 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_1026 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1026 IPR001789 Signal transduction response regulator, receiver domain YPD4_1027 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPD4_1027 IPR013785 Aldolase-type TIM barrel YPD4_1028 IPR005119 LysR, substrate-binding YPD4_1028 IPR000847 Transcription regulator HTH, LysR YPD4_1028 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1028 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1030 IPR000412 ABC-2 transporter YPD4_1031 IPR000412 ABC-2 transporter YPD4_1032 IPR003593 AAA+ ATPase domain YPD4_1032 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1032 IPR017871 ABC transporter, conserved site YPD4_1032 IPR003439 ABC transporter-like YPD4_1033 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_1033 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YPD4_1034 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPD4_1034 IPR009057 Homeobox-like domain superfamily YPD4_1034 IPR015292 Transcription regulator YbiH, C-terminal YPD4_1034 IPR001647 DNA-binding HTH domain, TetR-type YPD4_1034 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPD4_1035 IPR014014 RNA helicase, DEAD-box type, Q motif YPD4_1035 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPD4_1035 IPR011545 DEAD/DEAH box helicase domain YPD4_1035 IPR028622 ATP-dependent RNA helicase RhlE YPD4_1035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1035 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_1035 IPR001650 Helicase, C-terminal YPD4_1038 IPR001207 Transposase, mutator type YPD4_1039 IPR001207 Transposase, mutator type YPD4_1040 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPD4_1040 IPR003346 Transposase, IS116/IS110/IS902 YPD4_1041 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPD4_1041 IPR014014 RNA helicase, DEAD-box type, Q motif YPD4_1041 IPR028622 ATP-dependent RNA helicase RhlE YPD4_1041 IPR011545 DEAD/DEAH box helicase domain YPD4_1041 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_1041 IPR001650 Helicase, C-terminal YPD4_1041 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1044 IPR035587 DUS-like, FMN-binding domain YPD4_1044 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal YPD4_1044 IPR018517 tRNA-dihydrouridine synthase, conserved site YPD4_1044 IPR013785 Aldolase-type TIM barrel YPD4_1044 IPR032886 tRNA-dihydrouridine(16) synthase YPD4_1044 IPR001269 tRNA-dihydrouridine synthase YPD4_1045 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPD4_1045 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPD4_1045 IPR012338 Beta-lactamase/transpeptidase-like YPD4_1046 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YPD4_1046 IPR016164 FAD-linked oxidase-like, C-terminal YPD4_1046 IPR016166 FAD-binding domain, PCMH-type YPD4_1046 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_1046 IPR012256 D-lactate dehydrogenase YPD4_1046 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YPD4_1046 IPR016167 FAD-binding, type PCMH, subdomain 1 YPD4_1046 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YPD4_1046 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_1046 IPR006094 FAD linked oxidase, N-terminal YPD4_1047 IPR033469 CYTH-like domain superfamily YPD4_1047 IPR023577 CYTH domain YPD4_1047 IPR008173 Adenylyl cyclase CyaB YPD4_1048 IPR003615 HNH nuclease YPD4_1048 IPR002711 HNH endonuclease YPD4_1050 IPR003439 ABC transporter-like YPD4_1050 IPR017871 ABC transporter, conserved site YPD4_1050 IPR012693 ABC transporter, phosphonate import, PhnC YPD4_1050 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1050 IPR003593 AAA+ ATPase domain YPD4_1051 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein YPD4_1052 IPR005769 ABC transporter, permease PhnE/PtxC YPD4_1052 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1052 IPR035906 MetI-like superfamily YPD4_1053 IPR005769 ABC transporter, permease PhnE/PtxC YPD4_1053 IPR035906 MetI-like superfamily YPD4_1053 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1054 IPR009921 Domain of unknown function DUF1456 YPD4_1055 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPD4_1055 IPR000014 PAS domain YPD4_1055 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1055 IPR028082 Periplasmic binding protein-like I YPD4_1055 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_1055 IPR002197 DNA binding HTH domain, Fis-type YPD4_1055 IPR003593 AAA+ ATPase domain YPD4_1055 IPR025944 Sigma-54 interaction domain, conserved site YPD4_1055 IPR009057 Homeobox-like domain superfamily YPD4_1055 IPR002078 RNA polymerase sigma factor 54 interaction domain YPD4_1056 IPR001851 ABC transporter, permease YPD4_1057 IPR001851 ABC transporter, permease YPD4_1058 IPR003593 AAA+ ATPase domain YPD4_1058 IPR017871 ABC transporter, conserved site YPD4_1058 IPR005876 Cobalt transport protein ATP-binding subunit YPD4_1058 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1058 IPR003439 ABC transporter-like YPD4_1059 IPR017871 ABC transporter, conserved site YPD4_1059 IPR003593 AAA+ ATPase domain YPD4_1059 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPD4_1059 IPR003439 ABC transporter-like YPD4_1059 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1062 IPR001763 Rhodanese-like domain YPD4_1062 IPR036873 Rhodanese-like domain superfamily YPD4_1062 IPR001307 Thiosulphate sulfurtransferase, conserved site YPD4_1063 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPD4_1064 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPD4_1065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1065 IPR035906 MetI-like superfamily YPD4_1066 IPR003593 AAA+ ATPase domain YPD4_1066 IPR003439 ABC transporter-like YPD4_1066 IPR017871 ABC transporter, conserved site YPD4_1066 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1067 IPR035906 MetI-like superfamily YPD4_1067 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1068 IPR002293 Amino acid/polyamine transporter I YPD4_1069 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1069 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1069 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1069 IPR011193 Ornithine/lysine/arginine decarboxylase YPD4_1069 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPD4_1069 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPD4_1069 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPD4_1069 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPD4_1070 IPR000620 EamA domain YPD4_1070 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPD4_1071 IPR001897 Porin, gammaproteobacterial YPD4_1071 IPR033900 Porin domain, Gram-negative type YPD4_1071 IPR001702 Porin, Gram-negative type YPD4_1071 IPR023614 Porin domain superfamily YPD4_1071 IPR013793 Porin, Gram-negative type, conserved site YPD4_1072 IPR006554 Helicase-like, DEXD box c2 type YPD4_1072 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPD4_1072 IPR001650 Helicase, C-terminal YPD4_1072 IPR010614 DEAD2 YPD4_1072 IPR006555 ATP-dependent helicase, C-terminal YPD4_1072 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1072 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_1072 IPR039000 ATP-dependent DNA helicase DinG YPD4_1073 IPR002226 Catalase haem-binding site YPD4_1073 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YPD4_1073 IPR018028 Catalase, mono-functional, haem-containing YPD4_1073 IPR020835 Catalase superfamily YPD4_1073 IPR011614 Catalase core domain YPD4_1073 IPR040333 Catalase, clade 3 YPD4_1073 IPR010582 Catalase immune-responsive domain YPD4_1073 IPR024708 Catalase active site YPD4_1073 IPR037060 Catalase core domain superfamily YPD4_1074 IPR023614 Porin domain superfamily YPD4_1074 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_1074 IPR009998 YfaZ YPD4_1075 IPR013061 Tryptophan/tryrosine permease, conserved site YPD4_1075 IPR013059 Tryptophan/tyrosine transporter YPD4_1075 IPR018227 Amino acid/polyamine transporter 2 YPD4_1076 IPR036653 CinA-like, C-terminal YPD4_1076 IPR008135 Competence-induced protein CinA YPD4_1076 IPR036425 MoaB/Mog-like domain superfamily YPD4_1076 IPR001453 MoaB/Mog domain YPD4_1077 IPR036198 Ecotin superfamily YPD4_1077 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPD4_1077 IPR005658 Proteinase inhibitor I11, ecotin YPD4_1078 IPR009078 Ferritin-like superfamily YPD4_1078 IPR030475 Ribonucleotide reductase small subunit, acitve site YPD4_1078 IPR033909 Ribonucleotide reductase small subunit YPD4_1078 IPR012348 Ribonucleotide reductase-like YPD4_1078 IPR000358 Ribonucleotide reductase small subunit family YPD4_1079 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPD4_1079 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPD4_1079 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPD4_1079 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPD4_1079 IPR005144 ATP-cone domain YPD4_1079 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPD4_1080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1080 IPR010233 Ubiquinone biosynthesis O-methyltransferase YPD4_1081 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPD4_1081 IPR005743 DNA gyrase, subunit A YPD4_1081 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPD4_1081 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPD4_1081 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPD4_1081 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPD4_1081 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPD4_1082 IPR030856 Sensor histidine kinase RcsC YPD4_1082 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_1082 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_1082 IPR011006 CheY-like superfamily YPD4_1082 IPR038388 RcsC, C-terminal domain superfamily YPD4_1082 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_1082 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_1082 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YPD4_1082 IPR001789 Signal transduction response regulator, receiver domain YPD4_1082 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_1082 IPR005467 Histidine kinase domain YPD4_1083 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1083 IPR000792 Transcription regulator LuxR, C-terminal YPD4_1083 IPR001789 Signal transduction response regulator, receiver domain YPD4_1083 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_1083 IPR030864 Transcriptional regulatory protein RcsB YPD4_1083 IPR011006 CheY-like superfamily YPD4_1084 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily YPD4_1084 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_1084 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_1084 IPR005467 Histidine kinase domain YPD4_1084 IPR036641 HPT domain superfamily YPD4_1084 IPR030861 Phosphotransferase RcsD YPD4_1084 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain YPD4_1084 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPD4_1085 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_1085 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPD4_1085 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily YPD4_1085 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain YPD4_1085 IPR030861 Phosphotransferase RcsD YPD4_1085 IPR036641 HPT domain superfamily YPD4_1085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_1085 IPR005467 Histidine kinase domain YPD4_1086 IPR020846 Major facilitator superfamily domain YPD4_1086 IPR011701 Major facilitator superfamily YPD4_1086 IPR036259 MFS transporter superfamily YPD4_1087 IPR001897 Porin, gammaproteobacterial YPD4_1087 IPR013793 Porin, Gram-negative type, conserved site YPD4_1087 IPR023614 Porin domain superfamily YPD4_1087 IPR001702 Porin, Gram-negative type YPD4_1089 IPR001466 Beta-lactamase-related YPD4_1089 IPR012338 Beta-lactamase/transpeptidase-like YPD4_1090 IPR001927 Sodium:galactoside symporter YPD4_1090 IPR018043 Sodium:galactoside symporter, conserved site YPD4_1090 IPR036259 MFS transporter superfamily YPD4_1090 IPR039672 Lactose permease-like YPD4_1091 IPR001279 Metallo-beta-lactamase YPD4_1091 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPD4_1091 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YPD4_1092 IPR000727 Target SNARE coiled-coil homology domain YPD4_1092 IPR003660 HAMP domain YPD4_1092 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_1092 IPR004090 Chemotaxis methyl-accepting receptor YPD4_1092 IPR033479 Double Cache domain 1 YPD4_1092 IPR029151 Periplasmic sensor-like domain superfamily YPD4_1093 IPR020079 Peptidase A26, omptin, conserved site YPD4_1093 IPR000036 Peptidase A26, omptin YPD4_1093 IPR020080 Outer membrane adhesin/peptidase omptin YPD4_1094 IPR015927 Peptidase S24/S26A/S26B/S26C YPD4_1094 IPR036286 LexA/Signal peptidase-like superfamily YPD4_1094 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_1094 IPR001387 Cro/C1-type helix-turn-helix domain YPD4_1094 IPR039418 LexA-like YPD4_1095 IPR010534 Bacteriophage 933W, GpQ YPD4_1096 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily YPD4_1096 IPR010737 Four-carbon acid sugar kinase, N-terminal domain YPD4_1096 IPR042213 Nucleotide-binding, C-terminal domain superfamily YPD4_1096 IPR031475 Nucleotide-binding C-terminal domain YPD4_1097 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPD4_1097 IPR001303 Class II aldolase/adducin N-terminal YPD4_1098 IPR014036 DeoR C-terminal sensor domain YPD4_1098 IPR001034 DeoR-type HTH domain YPD4_1098 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPD4_1098 IPR037171 NagB/RpiA transferase-like YPD4_1098 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1098 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1099 IPR013022 Xylose isomerase-like, TIM barrel domain YPD4_1099 IPR026040 Hydroxypyruvate isomerase-like YPD4_1099 IPR036237 Xylose isomerase-like superfamily YPD4_1101 IPR035089 Tail sheath protein, subtilisin-like domain YPD4_1101 IPR020287 Tail sheath protein, C-terminal domain YPD4_1101 IPR007067 Tail sheath protein YPD4_1108 IPR006949 Baseplate protein J-like YPD4_1110 IPR037053 Phage tail collar domain superfamily YPD4_1110 IPR011083 Phage tail collar domain YPD4_1111 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1111 IPR001347 Sugar isomerase (SIS) YPD4_1111 IPR035472 RpiR-like, SIS domain YPD4_1111 IPR000281 Helix-turn-helix protein RpiR YPD4_1111 IPR009057 Homeobox-like domain superfamily YPD4_1112 IPR017853 Glycoside hydrolase superfamily YPD4_1112 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YPD4_1112 IPR018120 Glycoside hydrolase family 1, active site YPD4_1112 IPR001360 Glycoside hydrolase family 1 YPD4_1115 IPR036624 Hcp1-like superfamily YPD4_1115 IPR008514 Type VI secretion system effector, Hcp YPD4_1115 IPR003615 HNH nuclease YPD4_1117 IPR024588 Inner membrane protein YejM, N-terminal YPD4_1117 IPR012159 Inner membrane protein YejM YPD4_1117 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_1117 IPR000917 Sulfatase, N-terminal YPD4_1118 IPR007358 Nucleoid-associated protein NdpA YPD4_1119 IPR002686 Transposase IS200-like YPD4_1119 IPR036515 Transposase IS200-like superfamily YPD4_1120 IPR001650 Helicase, C-terminal YPD4_1120 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_1120 IPR011332 Zinc-binding ribosomal protein YPD4_1120 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1120 IPR006935 Helicase/UvrB, N-terminal YPD4_1121 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPD4_1121 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_1121 IPR006145 Pseudouridine synthase, RsuA/RluA YPD4_1121 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPD4_1121 IPR002942 RNA-binding S4 domain YPD4_1121 IPR036986 RNA-binding S4 domain superfamily YPD4_1121 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPD4_1122 IPR036259 MFS transporter superfamily YPD4_1122 IPR020846 Major facilitator superfamily domain YPD4_1122 IPR004734 Multidrug resistance protein YPD4_1122 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPD4_1122 IPR011701 Major facilitator superfamily YPD4_1123 IPR020489 Uncharacterised protein family YejG YPD4_1124 IPR017871 ABC transporter, conserved site YPD4_1124 IPR003439 ABC transporter-like YPD4_1124 IPR003593 AAA+ ATPase domain YPD4_1124 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_1124 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1125 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPD4_1125 IPR035906 MetI-like superfamily YPD4_1125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1126 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1126 IPR035906 MetI-like superfamily YPD4_1127 IPR000914 Solute-binding protein family 5 domain YPD4_1127 IPR030678 Peptide/nickel binding protein, MppA-type YPD4_1127 IPR039424 Solute-binding protein family 5 YPD4_1128 IPR001633 EAL domain YPD4_1128 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YPD4_1128 IPR035919 EAL domain superfamily YPD4_1129 IPR038765 Papain-like cysteine peptidase superfamily YPD4_1129 IPR000064 Endopeptidase, NLPC/P60 domain YPD4_1130 IPR032908 Lipid A 1-diphosphate synthase YPD4_1130 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPD4_1130 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPD4_1131 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPD4_1131 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPD4_1131 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1132 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1132 IPR011711 GntR, C-terminal YPD4_1132 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1132 IPR000524 Transcription regulator HTH, GntR YPD4_1132 IPR008920 Transcription regulator FadR/GntR, C-terminal YPD4_1133 IPR013118 Mannitol dehydrogenase, C-terminal YPD4_1133 IPR013131 Mannitol dehydrogenase, N-terminal YPD4_1133 IPR036291 NAD(P)-binding domain superfamily YPD4_1133 IPR023027 Mannitol dehydrogenase, conserved site YPD4_1133 IPR000669 Mannitol dehydrogenase YPD4_1133 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_1133 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_1134 IPR004628 Mannonate dehydratase YPD4_1134 IPR036237 Xylose isomerase-like superfamily YPD4_1135 IPR001059 Translation elongation factor P/YeiP, central YPD4_1135 IPR012340 Nucleic acid-binding, OB-fold YPD4_1135 IPR014722 Ribosomal protein L2, domain 2 YPD4_1135 IPR020599 Translation elongation factor P/YeiP YPD4_1135 IPR008991 Translation protein SH3-like domain superfamily YPD4_1135 IPR013852 Translation elongation factor P/YeiP, conserved site YPD4_1135 IPR015365 Elongation factor P, C-terminal YPD4_1135 IPR013185 Translation elongation factor, KOW-like YPD4_1135 IPR011897 Translation elongation factor P-like, YeiP YPD4_1136 IPR013059 Tryptophan/tyrosine transporter YPD4_1136 IPR018227 Amino acid/polyamine transporter 2 YPD4_1137 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1137 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1137 IPR036291 NAD(P)-binding domain superfamily YPD4_1138 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPD4_1138 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPD4_1138 IPR006236 D-3-phosphoglycerate dehydrogenase YPD4_1138 IPR029009 Allosteric substrate binding domain superfamily YPD4_1138 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPD4_1138 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPD4_1138 IPR002912 ACT domain YPD4_1138 IPR036291 NAD(P)-binding domain superfamily YPD4_1140 IPR010102 Succinate semialdehyde dehydrogenase YPD4_1140 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_1140 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPD4_1140 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_1140 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_1140 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1140 IPR015590 Aldehyde dehydrogenase domain YPD4_1141 IPR018483 Carbohydrate kinase, FGGY, conserved site YPD4_1141 IPR006000 Xylulokinase YPD4_1141 IPR000577 Carbohydrate kinase, FGGY YPD4_1141 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_1141 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_1142 IPR004788 Ribose 5-phosphate isomerase, type A YPD4_1142 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPD4_1142 IPR037171 NagB/RpiA transferase-like YPD4_1144 IPR003593 AAA+ ATPase domain YPD4_1144 IPR015861 ABC transporter, ribose import, RbsA YPD4_1144 IPR017871 ABC transporter, conserved site YPD4_1144 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1144 IPR003439 ABC transporter-like YPD4_1145 IPR001851 ABC transporter, permease YPD4_1146 IPR020476 NUDIX hydrolase YPD4_1146 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_1146 IPR020084 NUDIX hydrolase, conserved site YPD4_1146 IPR000086 NUDIX hydrolase domain YPD4_1147 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPD4_1147 IPR000032 Phosphocarrier protein HPr-like YPD4_1147 IPR002178 PTS EIIA type-2 domain YPD4_1147 IPR035895 HPr-like superfamily YPD4_1147 IPR016152 Phosphotransferase/anion transporter YPD4_1147 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPD4_1148 IPR017583 Tagatose/fructose phosphokinase YPD4_1148 IPR011611 Carbohydrate kinase PfkB YPD4_1148 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_1148 IPR022463 Fructose 1-phosphate kinase YPD4_1148 IPR029056 Ribokinase-like YPD4_1149 IPR036095 PTS system IIB component-like superfamily YPD4_1149 IPR013011 Phosphotransferase system, EIIB component, type 2 YPD4_1149 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPD4_1149 IPR003352 Phosphotransferase system, EIIC YPD4_1149 IPR013014 Phosphotransferase system, EIIC component, type 2 YPD4_1149 IPR006327 Phosphotransferase system, fructose IIC component YPD4_1149 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPD4_1150 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_1150 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_1150 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1151 IPR035182 Protein of unknown function PsaF YPD4_1153 IPR001829 Pili assembly chaperone, bacterial YPD4_1153 IPR008962 PapD-like superfamily YPD4_1153 IPR013783 Immunoglobulin-like fold YPD4_1153 IPR016147 Pili assembly chaperone, N-terminal YPD4_1153 IPR018046 Pili assembly chaperone, conserved site YPD4_1153 IPR016148 Pili assembly chaperone, C-terminal YPD4_1153 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_1154 IPR037224 PapC, N-terminal domain superfamily YPD4_1154 IPR025949 PapC-like, C-terminal domain YPD4_1154 IPR025885 PapC, N-terminal domain YPD4_1154 IPR018030 Fimbrial membrane usher, conserved site YPD4_1154 IPR000015 Outer membrane usher protein YPD4_1154 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_1155 IPR018246 AP endonuclease 2, zinc binding site YPD4_1155 IPR001719 AP endonuclease 2 YPD4_1155 IPR013022 Xylose isomerase-like, TIM barrel domain YPD4_1155 IPR036237 Xylose isomerase-like superfamily YPD4_1156 IPR004630 Uncharacterised protein family UPF0324, bacteria YPD4_1156 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPD4_1157 IPR004630 Uncharacterised protein family UPF0324, bacteria YPD4_1157 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPD4_1158 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1158 IPR005119 LysR, substrate-binding YPD4_1158 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1158 IPR000847 Transcription regulator HTH, LysR YPD4_1159 IPR004840 Amino acid permease, conserved site YPD4_1159 IPR004841 Amino acid permease/ SLC12A domain YPD4_1161 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_1161 IPR037294 ABC transporter, BtuC-like YPD4_1162 IPR003593 AAA+ ATPase domain YPD4_1162 IPR003439 ABC transporter-like YPD4_1162 IPR015863 ABC transporter, hemin import, HmuV YPD4_1162 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1163 IPR010917 TonB-dependent receptor, conserved site YPD4_1163 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_1163 IPR010916 TonB box, conserved site YPD4_1163 IPR039426 Vitamin B12 transporter BtuB-like YPD4_1163 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_1163 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_1163 IPR012910 TonB-dependent receptor, plug domain YPD4_1164 IPR036249 Thioredoxin-like superfamily YPD4_1164 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPD4_1164 IPR010987 Glutathione S-transferase, C-terminal-like YPD4_1164 IPR004045 Glutathione S-transferase, N-terminal YPD4_1164 IPR004046 Glutathione S-transferase, C-terminal YPD4_1165 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like YPD4_1165 IPR036412 HAD-like superfamily YPD4_1165 IPR023214 HAD superfamily YPD4_1167 IPR004872 Lipoprotein NlpA family YPD4_1168 IPR017871 ABC transporter, conserved site YPD4_1168 IPR026253 Methionine import ATP-binding protein MetN YPD4_1168 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1168 IPR003593 AAA+ ATPase domain YPD4_1168 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPD4_1168 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPD4_1168 IPR018449 NIL domain YPD4_1168 IPR003439 ABC transporter-like YPD4_1169 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1169 IPR035906 MetI-like superfamily YPD4_1170 IPR012338 Beta-lactamase/transpeptidase-like YPD4_1170 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPD4_1170 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPD4_1170 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPD4_1170 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPD4_1170 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPD4_1171 IPR004694 Hydroxy amino acid transporter YPD4_1172 IPR014036 DeoR C-terminal sensor domain YPD4_1172 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPD4_1172 IPR037171 NagB/RpiA transferase-like YPD4_1172 IPR001034 DeoR-type HTH domain YPD4_1173 IPR011343 Deoxyribose-phosphate aldolase YPD4_1173 IPR028581 Deoxyribose-phosphate aldolase type I YPD4_1173 IPR013785 Aldolase-type TIM barrel YPD4_1173 IPR002915 DeoC/FbaB/ lacD aldolase YPD4_1174 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPD4_1174 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPD4_1174 IPR033879 Undecaprenyl-diphosphatase YPD4_1176 IPR006037 Regulator of K+ conductance, C-terminal YPD4_1176 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPD4_1176 IPR023017 Transport protein YbjL, putative YPD4_1176 IPR006512 YidE/YbjL duplication YPD4_1177 IPR019660 Putative sensory transduction regulator YbjN YPD4_1178 IPR006059 Bacterial extracellular solute-binding protein YPD4_1178 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YPD4_1179 IPR003593 AAA+ ATPase domain YPD4_1179 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPD4_1179 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1179 IPR003439 ABC transporter-like YPD4_1179 IPR017871 ABC transporter, conserved site YPD4_1179 IPR013611 Transport-associated OB, type 2 YPD4_1179 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_1180 IPR035906 MetI-like superfamily YPD4_1180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1181 IPR035906 MetI-like superfamily YPD4_1181 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1182 IPR019703 Protein of unknown function DUF2593 YPD4_1183 IPR030391 RNA methyltransferase TrmA, conserved site YPD4_1183 IPR010280 (Uracil-5)-methyltransferase family YPD4_1183 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1183 IPR030390 RNA methyltransferase TrmA, active site YPD4_1183 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPD4_1184 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1184 IPR030390 RNA methyltransferase TrmA, active site YPD4_1184 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPD4_1184 IPR010280 (Uracil-5)-methyltransferase family YPD4_1184 IPR030391 RNA methyltransferase TrmA, conserved site YPD4_1185 IPR018313 Solute-binding protein family 3, conserved site YPD4_1185 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPD4_1185 IPR001320 Ionotropic glutamate receptor YPD4_1185 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_1188 IPR037294 ABC transporter, BtuC-like YPD4_1188 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_1189 IPR037294 ABC transporter, BtuC-like YPD4_1189 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_1190 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1190 IPR017871 ABC transporter, conserved site YPD4_1190 IPR003439 ABC transporter-like YPD4_1190 IPR003593 AAA+ ATPase domain YPD4_1191 IPR036291 NAD(P)-binding domain superfamily YPD4_1191 IPR004298 Nicotianamine synthase YPD4_1192 IPR036291 NAD(P)-binding domain superfamily YPD4_1192 IPR016935 Opine metallophore dehydrogenase YPD4_1193 IPR000620 EamA domain YPD4_1194 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_1194 IPR035906 MetI-like superfamily YPD4_1194 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1195 IPR035906 MetI-like superfamily YPD4_1195 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_1195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1196 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_1196 IPR018313 Solute-binding protein family 3, conserved site YPD4_1196 IPR001320 Ionotropic glutamate receptor YPD4_1196 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPD4_1197 IPR003439 ABC transporter-like YPD4_1197 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPD4_1197 IPR017871 ABC transporter, conserved site YPD4_1197 IPR003593 AAA+ ATPase domain YPD4_1197 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1198 IPR008240 Chorismate mutase, periplasmic YPD4_1198 IPR002701 Chorismate mutase II, prokaryotic-type YPD4_1198 IPR036263 Chorismate mutase type II superfamily YPD4_1199 IPR024289 Domain of unknown function DUF3828 YPD4_1200 IPR001509 NAD-dependent epimerase/dehydratase YPD4_1200 IPR036291 NAD(P)-binding domain superfamily YPD4_1201 IPR036291 NAD(P)-binding domain superfamily YPD4_1201 IPR016040 NAD(P)-binding domain YPD4_1201 IPR021295 Protein of unknown function DUF2867 YPD4_1202 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1202 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YPD4_1202 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1202 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1202 IPR023603 Threonine aldolase YPD4_1203 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPD4_1203 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPD4_1203 IPR029061 Thiamin diphosphate-binding fold YPD4_1203 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPD4_1203 IPR012000 Thiamine pyrophosphate enzyme, central domain YPD4_1203 IPR000399 TPP-binding enzyme, conserved site YPD4_1204 IPR012675 Beta-grasp domain superfamily YPD4_1204 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_1204 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_1204 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPD4_1204 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_1204 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_1204 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_1204 IPR000951 Phthalate dioxygenase reductase YPD4_1204 IPR017938 Riboflavin synthase-like beta-barrel YPD4_1205 IPR016100 Prismane, alpha-bundle YPD4_1205 IPR011254 Prismane-like superfamily YPD4_1205 IPR016099 Prismane-like, alpha/beta-sandwich YPD4_1205 IPR010048 Hydroxylamine reductase YPD4_1205 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YPD4_1206 IPR005642 Lysine exporter LysO YPD4_1207 IPR034139 OLD protein-like, TOPRIM domain YPD4_1207 IPR022602 Protein of unknown function DUF2813 YPD4_1207 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1207 IPR006171 TOPRIM domain YPD4_1208 IPR007488 Protein of unknown function DUF535 YPD4_1209 IPR030190 Macrolide export protein MacA YPD4_1209 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_1209 IPR006143 RND efflux pump, membrane fusion protein YPD4_1210 IPR003439 ABC transporter-like YPD4_1210 IPR017871 ABC transporter, conserved site YPD4_1210 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPD4_1210 IPR025857 MacB-like periplasmic core domain YPD4_1210 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1210 IPR003838 ABC transporter permease protein domain YPD4_1210 IPR003593 AAA+ ATPase domain YPD4_1211 IPR003769 Adaptor protein ClpS, core YPD4_1211 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPD4_1211 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPD4_1212 IPR018368 ClpA/B, conserved site 1 YPD4_1212 IPR019489 Clp ATPase, C-terminal YPD4_1212 IPR003959 ATPase, AAA-type, core YPD4_1212 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YPD4_1212 IPR001270 ClpA/B family YPD4_1212 IPR028299 ClpA/B, conserved site 2 YPD4_1212 IPR003593 AAA+ ATPase domain YPD4_1212 IPR041546 ClpA/ClpB, AAA lid domain YPD4_1212 IPR004176 Clp, N-terminal YPD4_1212 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1212 IPR036628 Clp, N-terminal domain superfamily YPD4_1214 IPR016181 Acyl-CoA N-acyltransferase YPD4_1214 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YPD4_1214 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal YPD4_1215 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1215 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YPD4_1215 IPR003439 ABC transporter-like YPD4_1215 IPR017871 ABC transporter, conserved site YPD4_1215 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1215 IPR003593 AAA+ ATPase domain YPD4_1215 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1216 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YPD4_1216 IPR017871 ABC transporter, conserved site YPD4_1216 IPR003439 ABC transporter-like YPD4_1216 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1216 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1216 IPR039421 Type I protein exporter YPD4_1216 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1216 IPR003593 AAA+ ATPase domain YPD4_1217 IPR023753 FAD/NAD(P)-binding domain YPD4_1217 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_1217 IPR005982 Thioredoxin reductase YPD4_1217 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YPD4_1218 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1218 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1218 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPD4_1218 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPD4_1218 IPR011008 Dimeric alpha-beta barrel YPD4_1218 IPR000485 AsnC-type HTH domain YPD4_1218 IPR011991 ArsR-like helix-turn-helix domain YPD4_1218 IPR019888 Transcription regulator AsnC-type YPD4_1219 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1219 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1219 IPR018541 FtsK gamma domain YPD4_1219 IPR002543 FtsK domain YPD4_1219 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1219 IPR041027 FtsK alpha domain YPD4_1219 IPR025199 DNA translocase FtsK, 4TM region YPD4_1220 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YPD4_1220 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPD4_1220 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPD4_1221 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPD4_1221 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1221 IPR003959 ATPase, AAA-type, core YPD4_1221 IPR021886 MgsA AAA+ ATPase C-terminal YPD4_1221 IPR003593 AAA+ ATPase domain YPD4_1221 IPR032423 AAA C-terminal domain YPD4_1222 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_1222 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily YPD4_1222 IPR033729 Serine-tRNA ligase catalytic core domain YPD4_1222 IPR015866 Serine-tRNA synthetase, type1, N-terminal YPD4_1222 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPD4_1222 IPR002317 Serine-tRNA ligase, type1 YPD4_1222 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPD4_1223 IPR011701 Major facilitator superfamily YPD4_1223 IPR023745 MSF-type transporter, YcaD YPD4_1223 IPR020846 Major facilitator superfamily domain YPD4_1223 IPR036259 MFS transporter superfamily YPD4_1224 IPR007197 Radical SAM YPD4_1224 IPR013785 Aldolase-type TIM barrel YPD4_1224 IPR034457 Organic radical-activating enzymes YPD4_1224 IPR012838 Pyruvate formate-lyase 1 activating enzyme YPD4_1224 IPR034465 Pyruvate formate-lyase activase YPD4_1224 IPR012839 Organic radical enzyme activase YPD4_1224 IPR001989 Radical-activating enzyme, conserved site YPD4_1226 IPR004184 Pyruvate formate lyase domain YPD4_1226 IPR001150 Glycine radical domain YPD4_1226 IPR005949 Formate acetyltransferase YPD4_1226 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPD4_1227 IPR001150 Glycine radical domain YPD4_1227 IPR004184 Pyruvate formate lyase domain YPD4_1227 IPR005949 Formate acetyltransferase YPD4_1227 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPD4_1228 IPR024002 Formate/nitrite transporter, conserved site YPD4_1228 IPR023999 Formate transporter FocA, putative YPD4_1228 IPR000292 Formate/nitrite transporter YPD4_1228 IPR023271 Aquaporin-like YPD4_1229 IPR041080 YcaO cyclodehydratase, C-terminal YPD4_1229 IPR003776 YcaO-like domain YPD4_1230 IPR027475 Asparaginase/glutaminase, active site 2 YPD4_1230 IPR040919 Asparaginase/glutaminase, C-terminal YPD4_1230 IPR027473 L-asparaginase, C-terminal YPD4_1230 IPR027474 L-asparaginase, N-terminal YPD4_1230 IPR037152 L-asparaginase, N-terminal domain superfamily YPD4_1230 IPR020827 Asparaginase/glutaminase, active site 1 YPD4_1230 IPR006034 Asparaginase/glutaminase-like YPD4_1230 IPR036152 Asparaginase/glutaminase-like superfamily YPD4_1230 IPR004550 L-asparaginase, type II YPD4_1231 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_1231 IPR005594 YadA-like, C-terminal YPD4_1231 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_1231 IPR024973 ESPR domain YPD4_1231 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPD4_1231 IPR008640 Head domain of trimeric autotransporter adhesin YPD4_1231 IPR005594 YadA-like, C-terminal YPD4_1231 IPR024973 ESPR domain YPD4_1231 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPD4_1231 IPR008640 Head domain of trimeric autotransporter adhesin YPD4_1233 IPR000192 Aminotransferase class V domain YPD4_1233 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_1233 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1233 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1233 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1233 IPR022278 Phosphoserine aminotransferase YPD4_1234 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPD4_1234 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YPD4_1234 IPR001986 Enolpyruvate transferase domain YPD4_1234 IPR036968 Enolpyruvate transferase domain superfamily YPD4_1234 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YPD4_1235 IPR003136 Cytidylate kinase YPD4_1235 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1235 IPR011994 Cytidylate kinase domain YPD4_1236 IPR003029 S1 domain YPD4_1236 IPR022967 RNA-binding domain, S1 YPD4_1236 IPR000110 Ribosomal protein S1 YPD4_1236 IPR012340 Nucleic acid-binding, OB-fold YPD4_1237 IPR001279 Metallo-beta-lactamase YPD4_1237 IPR035681 ComA-like, MBL domain YPD4_1237 IPR004477 ComEC/Rec2-related protein YPD4_1237 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPD4_1237 IPR004797 Competence protein ComEC/Rec2 YPD4_1238 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1238 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1238 IPR003439 ABC transporter-like YPD4_1238 IPR017871 ABC transporter, conserved site YPD4_1238 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1238 IPR003593 AAA+ ATPase domain YPD4_1238 IPR011917 ABC transporter, lipid A export, MsbA YPD4_1238 IPR039421 Type I protein exporter YPD4_1239 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1239 IPR003758 Tetraacyldisaccharide 4'-kinase YPD4_1240 IPR009770 Domain of unknown function DUF1338 YPD4_1241 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YPD4_1241 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_1241 IPR003329 Acylneuraminate cytidylyltransferase YPD4_1242 IPR002575 Aminoglycoside phosphotransferase YPD4_1242 IPR011009 Protein kinase-like domain superfamily YPD4_1243 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1243 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase YPD4_1244 IPR010916 TonB box, conserved site YPD4_1244 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1244 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1244 IPR033440 Chromosome partition protein MukF, middle domain YPD4_1244 IPR005582 Chromosome partition protein MukF YPD4_1244 IPR033441 Chromosome partition protein MukF, C-terminal domain YPD4_1244 IPR036141 MukF, middle domain superfamily YPD4_1244 IPR033439 Chromosome partition protein MukF, winged-helix domain YPD4_1244 IPR038198 MukF, C-terminal domain superfamily YPD4_1245 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YPD4_1245 IPR042038 MukE, N-terminal domain YPD4_1245 IPR042037 MukE, C-terminal domain YPD4_1246 IPR032520 MukB, hinge domain YPD4_1246 IPR007406 MukB, N-terminal domain YPD4_1246 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1246 IPR012090 Chromosome partition protein MukB YPD4_1248 IPR005490 L,D-transpeptidase catalytic domain YPD4_1248 IPR038063 L,D-transpeptidase catalytic domain-like YPD4_1248 IPR036365 PGBD-like superfamily YPD4_1248 IPR002477 Peptidoglycan binding-like YPD4_1249 IPR005490 L,D-transpeptidase catalytic domain YPD4_1249 IPR036365 PGBD-like superfamily YPD4_1249 IPR038063 L,D-transpeptidase catalytic domain-like YPD4_1249 IPR002477 Peptidoglycan binding-like YPD4_1250 IPR010275 Protein of unknown function DUF882 YPD4_1250 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPD4_1250 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_1251 IPR001279 Metallo-beta-lactamase YPD4_1251 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPD4_1252 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1252 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1252 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPD4_1252 IPR000796 Aspartate/other aminotransferase YPD4_1252 IPR004839 Aminotransferase, class I/classII YPD4_1252 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1253 IPR001702 Porin, Gram-negative type YPD4_1253 IPR013793 Porin, Gram-negative type, conserved site YPD4_1253 IPR001897 Porin, gammaproteobacterial YPD4_1253 IPR033900 Porin domain, Gram-negative type YPD4_1253 IPR023614 Porin domain superfamily YPD4_1254 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPD4_1254 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPD4_1254 IPR012340 Nucleic acid-binding, OB-fold YPD4_1254 IPR004522 Asparagine-tRNA ligase YPD4_1254 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_1254 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPD4_1255 IPR007229 Nicotinate phosphoribosyltransferase family YPD4_1255 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain YPD4_1255 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPD4_1255 IPR006406 Nicotinate phosphoribosyltransferase YPD4_1255 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase YPD4_1256 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YPD4_1256 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily YPD4_1256 IPR042097 Aminopeptidase N-like , N-terminal YPD4_1256 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPD4_1256 IPR012779 Peptidase M1, alanyl aminopeptidase YPD4_1256 IPR027268 Peptidase M4/M1, CTD superfamily YPD4_1256 IPR014782 Peptidase M1, membrane alanine aminopeptidase YPD4_1256 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold YPD4_1256 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily YPD4_1257 IPR042097 Aminopeptidase N-like , N-terminal YPD4_1257 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YPD4_1257 IPR014782 Peptidase M1, membrane alanine aminopeptidase YPD4_1257 IPR012779 Peptidase M1, alanyl aminopeptidase YPD4_1257 IPR027268 Peptidase M4/M1, CTD superfamily YPD4_1257 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPD4_1257 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily YPD4_1257 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold YPD4_1257 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily YPD4_1258 IPR005720 Dihydroorotate dehydrogenase domain YPD4_1258 IPR013785 Aldolase-type TIM barrel YPD4_1258 IPR005719 Dihydroorotate dehydrogenase, class 2 YPD4_1258 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YPD4_1258 IPR001295 Dihydroorotate dehydrogenase, conserved site YPD4_1259 IPR009809 Cell division protein ZapC YPD4_1260 IPR005302 Molybdenum cofactor sulfurase, C-terminal YPD4_1260 IPR012675 Beta-grasp domain superfamily YPD4_1260 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_1260 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_1260 IPR005303 MOSC, N-terminal beta barrel YPD4_1260 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPD4_1260 IPR011037 Pyruvate kinase-like, insert domain superfamily YPD4_1261 IPR004114 THUMP domain YPD4_1261 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1261 IPR019614 S-adenosylmethionine-dependent methyltransferase YPD4_1261 IPR000241 Putative RNA methylase domain YPD4_1261 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_1261 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YPD4_1262 IPR003593 AAA+ ATPase domain YPD4_1262 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPD4_1262 IPR017871 ABC transporter, conserved site YPD4_1262 IPR003439 ABC transporter-like YPD4_1262 IPR032781 ABC-transporter extension domain YPD4_1262 IPR032524 ABC transporter Uup, C-terminal YPD4_1262 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1263 IPR007498 Intermembrane transport protein PqiA-like YPD4_1263 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPD4_1264 IPR003399 Mce/MlaD YPD4_1265 IPR005586 ABC-type transport auxiliary lipoprotein component YPD4_1266 IPR002686 Transposase IS200-like YPD4_1266 IPR036515 Transposase IS200-like superfamily YPD4_1267 IPR016039 Thiolase-like YPD4_1267 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPD4_1267 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_1267 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_1267 IPR018201 Beta-ketoacyl synthase, active site YPD4_1267 IPR000794 Beta-ketoacyl synthase YPD4_1267 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_1268 IPR001270 ClpA/B family YPD4_1268 IPR003593 AAA+ ATPase domain YPD4_1268 IPR002611 IstB-like ATP-binding protein YPD4_1268 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1268 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1269 IPR012337 Ribonuclease H-like superfamily YPD4_1269 IPR036397 Ribonuclease H superfamily YPD4_1269 IPR001584 Integrase, catalytic core YPD4_1269 IPR017894 HTH domain, IS21 transposase-type YPD4_1269 IPR006120 Resolvase, HTH domain YPD4_1270 IPR016039 Thiolase-like YPD4_1270 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_1270 IPR000794 Beta-ketoacyl synthase YPD4_1270 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_1270 IPR018201 Beta-ketoacyl synthase, active site YPD4_1270 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPD4_1270 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_1271 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YPD4_1271 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPD4_1271 IPR029069 HotDog domain superfamily YPD4_1272 IPR041699 Lon protease, AAA domain YPD4_1272 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_1272 IPR027065 Lon protease YPD4_1272 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_1272 IPR008269 Peptidase S16, Lon proteolytic domain YPD4_1273 IPR013321 Arc-type ribbon-helix-helix YPD4_1273 IPR009390 Macrodomain Ter protein, MatP YPD4_1273 IPR035375 MatP, C-terminal ribbon-helix-helix domain YPD4_1273 IPR038339 MatP, N-terminal domain superfamily YPD4_1273 IPR035087 MatP, N-terminal YPD4_1274 IPR036515 Transposase IS200-like superfamily YPD4_1274 IPR002686 Transposase IS200-like YPD4_1275 IPR000498 Outer membrane protein OmpA-like, transmembrane domain YPD4_1275 IPR036737 OmpA-like domain superfamily YPD4_1275 IPR006665 OmpA-like domain YPD4_1275 IPR006664 Outer membrane protein, bacterial YPD4_1275 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_1275 IPR006690 Outer membrane protein, OmpA-like, conserved site YPD4_1275 IPR002368 Outer membrane protein, OmpA YPD4_1276 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1276 IPR004596 Cell division suppressor protein, SulA YPD4_1277 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPD4_1277 IPR007076 TfoX, N-terminal YPD4_1277 IPR007077 TfoX, C-terminal YPD4_1278 IPR032692 Integral membrane protein YccS, N-terminal YPD4_1278 IPR010020 Integral membrane protein, YccS/YhfK YPD4_1278 IPR010019 Integral membrane protein, YccS YPD4_1279 IPR005185 Inner membrane component domain YPD4_1279 IPR031308 Uncharacterised conserved protein UCP028777 YPD4_1280 IPR014017 UvrD-like DNA helicase, C-terminal YPD4_1280 IPR034739 UvrD/AddA helicase, N-terminal YPD4_1280 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1280 IPR000212 DNA helicase, UvrD/REP type YPD4_1280 IPR022161 DNA helicase IV, N-terminal domain YPD4_1280 IPR014016 UvrD-like helicase, ATP-binding domain YPD4_1281 IPR018148 Methylglyoxal synthase, active site YPD4_1281 IPR004363 Methylglyoxal synthase YPD4_1281 IPR036914 Methylglyoxal synthase-like domain superfamily YPD4_1281 IPR011607 Methylglyoxal synthase-like domain YPD4_1282 IPR018635 Uncharacterised protein family UPF0319 YPD4_1283 IPR003781 CoA-binding YPD4_1283 IPR036291 NAD(P)-binding domain superfamily YPD4_1284 IPR022866 Heat shock protein HspQ YPD4_1284 IPR036623 Hemimethylated DNA-binding domain superfamily YPD4_1284 IPR011722 Hemimethylated DNA-binding domain YPD4_1285 IPR036974 PUA domain superfamily YPD4_1285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1285 IPR019614 S-adenosylmethionine-dependent methyltransferase YPD4_1285 IPR023542 rRNA large subunit methyltransferase I YPD4_1285 IPR041532 RlmI, PUA-like domain YPD4_1285 IPR015947 PUA-like superfamily YPD4_1285 IPR002478 PUA domain YPD4_1286 IPR025526 DsrC-like domain superfamily YPD4_1286 IPR042072 DsrC-like protein, C-terminal domain YPD4_1286 IPR007453 Sulphur transfer protein DsrC/TusE YPD4_1289 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_1289 IPR016167 FAD-binding, type PCMH, subdomain 1 YPD4_1289 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_1289 IPR012951 Berberine/berberine-like YPD4_1289 IPR016164 FAD-linked oxidase-like, C-terminal YPD4_1289 IPR016166 FAD-binding domain, PCMH-type YPD4_1289 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YPD4_1289 IPR006094 FAD linked oxidase, N-terminal YPD4_1290 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1290 IPR011294 3-hydroxybutyrate dehydrogenase YPD4_1290 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1290 IPR036291 NAD(P)-binding domain superfamily YPD4_1291 IPR029069 HotDog domain superfamily YPD4_1291 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPD4_1291 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPD4_1292 IPR016039 Thiolase-like YPD4_1292 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_1292 IPR000794 Beta-ketoacyl synthase YPD4_1292 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_1292 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPD4_1292 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_1292 IPR018201 Beta-ketoacyl synthase, active site YPD4_1293 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1293 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1293 IPR036291 NAD(P)-binding domain superfamily YPD4_1293 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPD4_1294 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YPD4_1294 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YPD4_1294 IPR016039 Thiolase-like YPD4_1296 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPD4_1296 IPR029045 ClpP/crotonase-like domain superfamily YPD4_1296 IPR001753 Enoyl-CoA hydratase/isomerase YPD4_1297 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1297 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1297 IPR036291 NAD(P)-binding domain superfamily YPD4_1299 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPD4_1299 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPD4_1299 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPD4_1299 IPR001227 Acyl transferase domain superfamily YPD4_1299 IPR014043 Acyl transferase YPD4_1299 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPD4_1304 IPR006664 Outer membrane protein, bacterial YPD4_1304 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_1304 IPR008722 Outer membrane porin F, N-terminal YPD4_1304 IPR036737 OmpA-like domain superfamily YPD4_1304 IPR028974 TSP type-3 repeat YPD4_1304 IPR006665 OmpA-like domain YPD4_1304 IPR006690 Outer membrane protein, OmpA-like, conserved site YPD4_1306 IPR004176 Clp, N-terminal YPD4_1306 IPR018368 ClpA/B, conserved site 1 YPD4_1306 IPR041546 ClpA/ClpB, AAA lid domain YPD4_1306 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1306 IPR003593 AAA+ ATPase domain YPD4_1306 IPR003959 ATPase, AAA-type, core YPD4_1306 IPR017729 Type VI secretion system, ATPase ClpV1 YPD4_1306 IPR036628 Clp, N-terminal domain superfamily YPD4_1306 IPR001270 ClpA/B family YPD4_1306 IPR019489 Clp ATPase, C-terminal YPD4_1313 IPR025959 Winged helix-turn helix domain YPD4_1313 IPR038717 Tc1-like transposase, DDE domain YPD4_1313 IPR012337 Ribonuclease H-like superfamily YPD4_1313 IPR009057 Homeobox-like domain superfamily YPD4_1325 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1325 IPR003439 ABC transporter-like YPD4_1325 IPR032781 ABC-transporter extension domain YPD4_1325 IPR003593 AAA+ ATPase domain YPD4_1327 IPR001207 Transposase, mutator type YPD4_1328 IPR035985 Ubiquitin-activating enzyme YPD4_1328 IPR000594 THIF-type NAD/FAD binding fold YPD4_1328 IPR012730 Molybdopterin synthase sulfurylase MoeB YPD4_1329 IPR038987 Molybdopterin biosynthesis protein MoeA-like YPD4_1329 IPR005111 MoeA, C-terminal, domain IV YPD4_1329 IPR036688 MoeA, C-terminal, domain IV superfamily YPD4_1329 IPR005110 MoeA, N-terminal and linker domain YPD4_1329 IPR036425 MoaB/Mog-like domain superfamily YPD4_1329 IPR036135 MoeA, N-terminal and linker domain superfamily YPD4_1329 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPD4_1329 IPR001453 MoaB/Mog domain YPD4_1331 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1331 IPR017871 ABC transporter, conserved site YPD4_1331 IPR003439 ABC transporter-like YPD4_1331 IPR003593 AAA+ ATPase domain YPD4_1332 IPR006143 RND efflux pump, membrane fusion protein YPD4_1332 IPR022824 Multidrug resistance protein MdtA YPD4_1332 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPD4_1334 IPR029058 Alpha/Beta hydrolase fold YPD4_1334 IPR014186 S-formylglutathione hydrolase YPD4_1334 IPR000801 Putative esterase YPD4_1335 IPR014183 Alcohol dehydrogenase class III YPD4_1335 IPR020843 Polyketide synthase, enoylreductase domain YPD4_1335 IPR036291 NAD(P)-binding domain superfamily YPD4_1335 IPR011032 GroES-like superfamily YPD4_1335 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPD4_1335 IPR013154 Alcohol dehydrogenase, N-terminal YPD4_1335 IPR013149 Alcohol dehydrogenase, C-terminal YPD4_1336 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1336 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1336 IPR000847 Transcription regulator HTH, LysR YPD4_1336 IPR005119 LysR, substrate-binding YPD4_1337 IPR036259 MFS transporter superfamily YPD4_1337 IPR010645 Uncharacterised MFS-type transporter YbfB YPD4_1338 IPR020602 GTP cyclohydrolase I domain YPD4_1338 IPR018234 GTP cyclohydrolase I, conserved site YPD4_1338 IPR001474 GTP cyclohydrolase I YPD4_1339 IPR007349 Domain of unknown function DUF418 YPD4_1340 IPR025997 Periplasmic binding protein YPD4_1340 IPR028082 Periplasmic binding protein-like I YPD4_1341 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1341 IPR015862 ABC transporter, galactose import, MglA YPD4_1341 IPR017871 ABC transporter, conserved site YPD4_1341 IPR003593 AAA+ ATPase domain YPD4_1341 IPR003439 ABC transporter-like YPD4_1342 IPR030158 Galactoside transport system permease protein MglC YPD4_1342 IPR001851 ABC transporter, permease YPD4_1343 IPR023604 Uncharacterised protein family SanA YPD4_1343 IPR003848 Domain of unknown function DUF218 YPD4_1344 IPR012302 Malic enzyme, NAD-binding YPD4_1344 IPR001891 Malic oxidoreductase YPD4_1344 IPR012301 Malic enzyme, N-terminal domain YPD4_1344 IPR015884 Malic enzyme, conserved site YPD4_1344 IPR023667 NAD-dependent malic enzyme, proteobacteria YPD4_1344 IPR037062 Malic enzyme, N-terminal domain superfamily YPD4_1344 IPR036291 NAD(P)-binding domain superfamily YPD4_1345 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YPD4_1345 IPR016192 APOBEC/CMP deaminase, zinc-binding YPD4_1345 IPR002125 Cytidine and deoxycytidylate deaminase domain YPD4_1345 IPR020797 Cytidine deaminase, bacteria YPD4_1345 IPR006263 Cytidine deaminase, homodimeric YPD4_1345 IPR016193 Cytidine deaminase-like YPD4_1346 IPR007300 CidB/LrgB family YPD4_1346 IPR005261 Conserved hypothetical protein CHP00659 YPD4_1347 IPR005538 LrgA/CidA family YPD4_1347 IPR022957 Uncharacterised protein family UPF0299 YPD4_1348 IPR020846 Major facilitator superfamily domain YPD4_1348 IPR011701 Major facilitator superfamily YPD4_1348 IPR036259 MFS transporter superfamily YPD4_1352 IPR002686 Transposase IS200-like YPD4_1352 IPR036515 Transposase IS200-like superfamily YPD4_1353 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain YPD4_1353 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal YPD4_1353 IPR002547 tRNA-binding domain YPD4_1353 IPR012340 Nucleic acid-binding, OB-fold YPD4_1353 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_1353 IPR029038 Methionyl-tRNA synthetase, Zn-domain YPD4_1353 IPR033911 Methioninyl-tRNA synthetase core domain YPD4_1353 IPR015413 Methionyl/Leucyl tRNA synthetase YPD4_1353 IPR014758 Methionyl-tRNA synthetase YPD4_1353 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPD4_1353 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_1353 IPR023458 Methionine-tRNA ligase, type 1 YPD4_1354 IPR019591 Mrp/NBP35 ATP-binding protein YPD4_1354 IPR000808 Mrp, conserved site YPD4_1354 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1354 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 YPD4_1354 IPR034904 Fe-S cluster assembly domain superfamily YPD4_1355 IPR006083 Phosphoribulokinase/uridine kinase YPD4_1355 IPR026008 Uridine kinase YPD4_1355 IPR000764 Uridine kinase-like YPD4_1355 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1356 IPR011962 dCTP deaminase YPD4_1356 IPR029054 dUTPase-like YPD4_1356 IPR036157 dUTPase-like superfamily YPD4_1356 IPR033704 dUTPase, trimeric YPD4_1357 IPR007844 AsmA YPD4_1358 IPR000644 CBS domain YPD4_1358 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_1358 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_1358 IPR005496 Integral membrane protein TerC YPD4_1358 IPR005170 Transporter-associated domain YPD4_1359 IPR022770 Ferric iron reductase FhuF domain YPD4_1359 IPR024726 Ferric iron reductase, C-terminal YPD4_1359 IPR008090 Ferric iron reductase YPD4_1360 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPD4_1360 IPR021115 Pyridoxal-phosphate binding site YPD4_1360 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1361 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPD4_1361 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_1363 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPD4_1363 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPD4_1363 IPR022770 Ferric iron reductase FhuF domain YPD4_1364 IPR003593 AAA+ ATPase domain YPD4_1364 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1364 IPR003439 ABC transporter-like YPD4_1364 IPR017871 ABC transporter, conserved site YPD4_1365 IPR037294 ABC transporter, BtuC-like YPD4_1365 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_1366 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_1366 IPR037294 ABC transporter, BtuC-like YPD4_1367 IPR002491 ABC transporter periplasmic binding domain YPD4_1368 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_1368 IPR011662 Secretin/TonB, short N-terminal domain YPD4_1368 IPR039423 TonB-dependent receptor-like YPD4_1368 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_1368 IPR010917 TonB-dependent receptor, conserved site YPD4_1368 IPR010105 TonB-dependent siderophore receptor YPD4_1368 IPR012910 TonB-dependent receptor, plug domain YPD4_1368 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_1369 IPR022770 Ferric iron reductase FhuF domain YPD4_1369 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPD4_1369 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPD4_1370 IPR005835 Nucleotidyl transferase domain YPD4_1370 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPD4_1370 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_1371 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPD4_1371 IPR005835 Nucleotidyl transferase domain YPD4_1371 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_1372 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YPD4_1372 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YPD4_1372 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_1372 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_1372 IPR006184 6-phosphogluconate-binding site YPD4_1372 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPD4_1372 IPR006183 6-phosphogluconate dehydrogenase YPD4_1372 IPR036291 NAD(P)-binding domain superfamily YPD4_1373 IPR023019 Histidine biosynthesis bifunctional protein HisIE YPD4_1373 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YPD4_1373 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YPD4_1373 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YPD4_1373 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily YPD4_1374 IPR013785 Aldolase-type TIM barrel YPD4_1374 IPR011060 Ribulose-phosphate binding barrel YPD4_1374 IPR004651 Histidine biosynthesis, HisF YPD4_1374 IPR006062 Histidine biosynthesis YPD4_1375 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YPD4_1375 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YPD4_1375 IPR011060 Ribulose-phosphate binding barrel YPD4_1375 IPR006062 Histidine biosynthesis YPD4_1375 IPR013785 Aldolase-type TIM barrel YPD4_1376 IPR017926 Glutamine amidotransferase YPD4_1376 IPR010139 Imidazole glycerol phosphate synthase, subunit H YPD4_1376 IPR029062 Class I glutamine amidotransferase-like YPD4_1377 IPR000807 Imidazoleglycerol-phosphate dehydratase YPD4_1377 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily YPD4_1377 IPR006543 Histidinol-phosphate phosphatase YPD4_1377 IPR005954 Histidinol-phosphatase YPD4_1377 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_1377 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YPD4_1377 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPD4_1377 IPR020566 Histidine biosynthesis bifunctional protein HisB YPD4_1377 IPR023214 HAD superfamily YPD4_1377 IPR036412 HAD-like superfamily YPD4_1378 IPR004839 Aminotransferase, class I/classII YPD4_1378 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPD4_1378 IPR005861 Histidinol-phosphate aminotransferase family YPD4_1378 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1378 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1378 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1379 IPR022695 Histidinol dehydrogenase, monofunctional YPD4_1379 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1379 IPR012131 Histidinol dehydrogenase YPD4_1379 IPR001692 Histidinol dehydrogenase, conserved site YPD4_1380 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPD4_1380 IPR013115 Histidine biosynthesis HisG, C-terminal YPD4_1380 IPR020621 ATP phosphoribosyltransferase HisG, long form YPD4_1380 IPR001348 ATP phosphoribosyltransferase HisG YPD4_1380 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPD4_1380 IPR018198 ATP phosphoribosyltransferase, conserved site YPD4_1380 IPR013820 ATP phosphoribosyltransferase, catalytic domain YPD4_1381 IPR036291 NAD(P)-binding domain superfamily YPD4_1381 IPR001509 NAD-dependent epimerase/dehydratase YPD4_1383 IPR001851 ABC transporter, permease YPD4_1384 IPR017871 ABC transporter, conserved site YPD4_1384 IPR003439 ABC transporter-like YPD4_1384 IPR003593 AAA+ ATPase domain YPD4_1384 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1384 IPR015861 ABC transporter, ribose import, RbsA YPD4_1385 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1385 IPR015861 ABC transporter, ribose import, RbsA YPD4_1385 IPR017871 ABC transporter, conserved site YPD4_1385 IPR003439 ABC transporter-like YPD4_1385 IPR003593 AAA+ ATPase domain YPD4_1386 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPD4_1386 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPD4_1386 IPR016205 Glycerol dehydrogenase YPD4_1387 IPR002293 Amino acid/polyamine transporter I YPD4_1388 IPR034747 Exonuclease I, SH3-like domain YPD4_1388 IPR013620 Exodeoxyribonuclease I, C-terminal YPD4_1388 IPR038649 Exonuclease I, SH3-like domain superfamily YPD4_1388 IPR034748 Exonuclease I, C-terminal alpha-helical domain YPD4_1388 IPR023607 Exodeoxyribonuclease I YPD4_1388 IPR013520 Exonuclease, RNase T/DNA polymerase III YPD4_1388 IPR012337 Ribonuclease H-like superfamily YPD4_1388 IPR036397 Ribonuclease H superfamily YPD4_1390 IPR001207 Transposase, mutator type YPD4_1391 IPR038177 Inverse autotransporter, beta-domain superfamily YPD4_1391 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPD4_1391 IPR022409 PKD/Chitinase domain YPD4_1391 IPR024519 Inverse autotransporter, beta-domain YPD4_1391 IPR018392 LysM domain YPD4_1391 IPR015217 Invasin, domain 3 YPD4_1391 IPR013783 Immunoglobulin-like fold YPD4_1391 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPD4_1391 IPR008964 Invasin/intimin cell-adhesion fragments YPD4_1392 IPR036259 MFS transporter superfamily YPD4_1392 IPR020846 Major facilitator superfamily domain YPD4_1392 IPR011701 Major facilitator superfamily YPD4_1393 IPR007263 Protein of unknown function DUF393 YPD4_1394 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1394 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1394 IPR036291 NAD(P)-binding domain superfamily YPD4_1395 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPD4_1395 IPR011234 Fumarylacetoacetase-like, C-terminal YPD4_1396 IPR029017 Enolase-like, N-terminal YPD4_1396 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPD4_1396 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPD4_1396 IPR036849 Enolase-like, C-terminal domain superfamily YPD4_1396 IPR029065 Enolase C-terminal domain-like YPD4_1396 IPR034610 L-fuconate dehydratase YPD4_1397 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YPD4_1397 IPR037396 FMN hydroxy acid dehydrogenase domain YPD4_1397 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YPD4_1397 IPR020920 L-lactate dehydrogenase, bacterial YPD4_1397 IPR000262 FMN-dependent dehydrogenase YPD4_1397 IPR013785 Aldolase-type TIM barrel YPD4_1398 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body YPD4_1398 IPR018223 Argininosuccinate synthase, conserved site YPD4_1398 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail YPD4_1398 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_1398 IPR001518 Argininosuccinate synthase YPD4_1398 IPR023437 Argininosuccinate synthase, type 2 subfamily YPD4_1399 IPR002528 Multi antimicrobial extrusion protein YPD4_1401 IPR037950 Peptidoglycan deacetylase PgdA-like YPD4_1401 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_1401 IPR002509 NodB homology domain YPD4_1403 IPR018636 Protein of unknown function DUF2058 YPD4_1404 IPR011006 CheY-like superfamily YPD4_1404 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_1404 IPR001789 Signal transduction response regulator, receiver domain YPD4_1404 IPR000792 Transcription regulator LuxR, C-terminal YPD4_1405 IPR004681 TRAP transporter large membrane protein DctM YPD4_1405 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPD4_1407 IPR018389 TRAP transporter solute receptor DctP/TeaA YPD4_1407 IPR038404 TRAP transporter solute receptor DctP superfamily YPD4_1407 IPR004682 TRAP transporter solute receptor, DctP family YPD4_1408 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain YPD4_1408 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPD4_1408 IPR008278 4'-phosphopantetheinyl transferase domain YPD4_1408 IPR003542 Enterobactin synthetase-like, component D YPD4_1409 IPR017853 Glycoside hydrolase superfamily YPD4_1409 IPR031704 Glycosyl hydrolase family 36, N-terminal YPD4_1409 IPR013785 Aldolase-type TIM barrel YPD4_1409 IPR031705 Glycosyl hydrolase family 36, C-terminal YPD4_1409 IPR002252 Glycoside hydrolase family 36 YPD4_1409 IPR000111 Glycoside hydrolase family 27/36, conserved site YPD4_1409 IPR038417 Alpha-galactosidase, N-terminal domain superfamily YPD4_1410 IPR020846 Major facilitator superfamily domain YPD4_1410 IPR018457 LacY/RafB permease family, conserved site YPD4_1410 IPR000576 LacY/RafB permease family YPD4_1410 IPR036259 MFS transporter superfamily YPD4_1411 IPR001207 Transposase, mutator type YPD4_1412 IPR023214 HAD superfamily YPD4_1412 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_1412 IPR006439 HAD hydrolase, subfamily IA YPD4_1412 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPD4_1412 IPR036412 HAD-like superfamily YPD4_1413 IPR025229 YniB-like protein YPD4_1415 IPR037294 ABC transporter, BtuC-like YPD4_1415 IPR001626 ABC transporter, TroCD-like YPD4_1416 IPR037294 ABC transporter, BtuC-like YPD4_1416 IPR001626 ABC transporter, TroCD-like YPD4_1417 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1417 IPR017871 ABC transporter, conserved site YPD4_1417 IPR003439 ABC transporter-like YPD4_1417 IPR003593 AAA+ ATPase domain YPD4_1418 IPR006127 Periplasmic solute binding protein, ZnuA-like YPD4_1418 IPR006129 Adhesin B YPD4_1418 IPR006128 Adhesion lipoprotein YPD4_1419 IPR008258 Transglycosylase SLT domain 1 YPD4_1419 IPR000189 Prokaryotic transglycosylase, active site YPD4_1419 IPR023346 Lysozyme-like domain superfamily YPD4_1419 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A YPD4_1420 IPR002771 Multiple antibiotic resistance (MarC)-related YPD4_1421 IPR004154 Anticodon-binding YPD4_1421 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPD4_1421 IPR033728 Threonine-tRNA ligase catalytic core domain YPD4_1421 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPD4_1421 IPR002320 Threonine-tRNA ligase, class IIa YPD4_1421 IPR012676 TGS-like YPD4_1421 IPR004095 TGS YPD4_1421 IPR012675 Beta-grasp domain superfamily YPD4_1421 IPR036621 Anticodon-binding domain superfamily YPD4_1421 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPD4_1421 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_1422 IPR019813 Translation initiation factor 3, conserved site YPD4_1422 IPR001288 Translation initiation factor 3 YPD4_1422 IPR019815 Translation initiation factor 3, C-terminal YPD4_1422 IPR019814 Translation initiation factor 3, N-terminal YPD4_1422 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily YPD4_1422 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily YPD4_1423 IPR035566 Ribosomal protein L20, C-terminal YPD4_1423 IPR005813 Ribosomal protein L20 YPD4_1424 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPD4_1424 IPR002319 Phenylalanyl-tRNA synthetase YPD4_1424 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YPD4_1424 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YPD4_1424 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_1424 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YPD4_1425 IPR005146 B3/B4 tRNA-binding domain YPD4_1425 IPR005147 tRNA synthetase, B5-domain YPD4_1425 IPR009061 Putative DNA-binding domain superfamily YPD4_1425 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPD4_1425 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily YPD4_1425 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YPD4_1425 IPR012340 Nucleic acid-binding, OB-fold YPD4_1425 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain YPD4_1425 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain YPD4_1425 IPR005121 Ferrodoxin-fold anticodon-binding domain YPD4_1425 IPR002547 tRNA-binding domain YPD4_1427 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_1427 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YPD4_1427 IPR037294 ABC transporter, BtuC-like YPD4_1428 IPR033674 Thioredoxin/glutathione peroxidase BtuE YPD4_1428 IPR029759 Glutathione peroxidase active site YPD4_1428 IPR029760 Glutathione peroxidase conserved site YPD4_1428 IPR036249 Thioredoxin-like superfamily YPD4_1428 IPR000889 Glutathione peroxidase YPD4_1429 IPR003593 AAA+ ATPase domain YPD4_1429 IPR003439 ABC transporter-like YPD4_1429 IPR023693 ABC transporter, vitamin B12, BtuD YPD4_1429 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1429 IPR017871 ABC transporter, conserved site YPD4_1430 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YPD4_1430 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1430 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPD4_1430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1431 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_1431 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YPD4_1431 IPR001173 Glycosyltransferase 2-like YPD4_1432 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPD4_1432 IPR002376 Formyl transferase, N-terminal YPD4_1432 IPR005793 Formyl transferase, C-terminal YPD4_1432 IPR036477 Formyl transferase, N-terminal domain superfamily YPD4_1432 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPD4_1432 IPR001509 NAD-dependent epimerase/dehydratase YPD4_1432 IPR036291 NAD(P)-binding domain superfamily YPD4_1433 IPR002509 NodB homology domain YPD4_1433 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YPD4_1433 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_1434 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YPD4_1434 IPR003342 Glycosyl transferase family 39/83 YPD4_1435 IPR000390 Small multidrug resistance protein family YPD4_1435 IPR000620 EamA domain YPD4_1435 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YPD4_1436 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YPD4_1436 IPR000390 Small multidrug resistance protein family YPD4_1437 IPR038765 Papain-like cysteine peptidase superfamily YPD4_1437 IPR000064 Endopeptidase, NLPC/P60 domain YPD4_1438 IPR019491 Lipoate protein ligase, C-terminal YPD4_1438 IPR023741 Lipoate-protein ligase A YPD4_1438 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPD4_1438 IPR004562 Lipoyltransferase/lipoate-protein ligase YPD4_1439 IPR003846 Protein adenylyltransferase SelO YPD4_1440 IPR003846 Protein adenylyltransferase SelO YPD4_1441 IPR006219 DHAP synthase, class 1 YPD4_1441 IPR013785 Aldolase-type TIM barrel YPD4_1441 IPR006218 DAHP synthetase I/KDSA YPD4_1442 IPR005177 Bifunctional kinase-pyrophosphorylase YPD4_1442 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPD4_1442 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily YPD4_1443 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YPD4_1443 IPR023151 PEP-utilising enzyme, conserved site YPD4_1443 IPR000121 PEP-utilising enzyme, C-terminal YPD4_1443 IPR018274 PEP-utilising enzyme, active site YPD4_1443 IPR006319 Phosphoenolpyruvate synthase YPD4_1443 IPR008279 PEP-utilising enzyme, mobile domain YPD4_1443 IPR040442 Pyruvate kinase-like domain superfamily YPD4_1443 IPR013815 ATP-grasp fold, subdomain 1 YPD4_1443 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_1443 IPR036637 Phosphohistidine domain superfamily YPD4_1444 IPR002549 Transmembrane protein TqsA-like YPD4_1445 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_1445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_1445 IPR016166 FAD-binding domain, PCMH-type YPD4_1445 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_1445 IPR016164 FAD-linked oxidase-like, C-terminal YPD4_1445 IPR004113 FAD-linked oxidase, C-terminal YPD4_1445 IPR006094 FAD linked oxidase, N-terminal YPD4_1445 IPR009051 Alpha-helical ferredoxin YPD4_1446 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI YPD4_1446 IPR006683 Thioesterase domain YPD4_1446 IPR003736 Phenylacetic acid degradation-related domain YPD4_1446 IPR029069 HotDog domain superfamily YPD4_1447 IPR011298 FeS assembly scaffold SufA YPD4_1447 IPR035903 HesB-like domain superfamily YPD4_1447 IPR016092 FeS cluster insertion protein YPD4_1447 IPR000361 FeS cluster biogenesis YPD4_1447 IPR017870 FeS cluster insertion, C-terminal, conserved site YPD4_1448 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPD4_1448 IPR000825 SUF system FeS cluster assembly, SufBD YPD4_1448 IPR010231 SUF system FeS cluster assembly, SufB YPD4_1449 IPR010230 FeS cluster assembly SUF system, ATPase SufC YPD4_1449 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1449 IPR003439 ABC transporter-like YPD4_1449 IPR003593 AAA+ ATPase domain YPD4_1449 IPR017871 ABC transporter, conserved site YPD4_1450 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPD4_1450 IPR000825 SUF system FeS cluster assembly, SufBD YPD4_1450 IPR011542 SUF system FeS cluster assembly, SufD YPD4_1451 IPR000192 Aminotransferase class V domain YPD4_1451 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_1451 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1451 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1451 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1451 IPR010970 Cysteine desulfurase, SufS YPD4_1452 IPR003808 Fe-S metabolism associated domain, SufE-like YPD4_1452 IPR023939 Cysteine desulfuration protein SufE YPD4_1453 IPR005490 L,D-transpeptidase catalytic domain YPD4_1453 IPR041597 L,D-transpeptidase C-terminal domain YPD4_1453 IPR038063 L,D-transpeptidase catalytic domain-like YPD4_1453 IPR018392 LysM domain YPD4_1454 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1454 IPR002611 IstB-like ATP-binding protein YPD4_1454 IPR003593 AAA+ ATPase domain YPD4_1454 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1454 IPR001270 ClpA/B family YPD4_1455 IPR036397 Ribonuclease H superfamily YPD4_1455 IPR012337 Ribonuclease H-like superfamily YPD4_1455 IPR001584 Integrase, catalytic core YPD4_1455 IPR017894 HTH domain, IS21 transposase-type YPD4_1455 IPR006120 Resolvase, HTH domain YPD4_1457 IPR015795 Pyruvate kinase, C-terminal YPD4_1457 IPR015793 Pyruvate kinase, barrel YPD4_1457 IPR018209 Pyruvate kinase, active site YPD4_1457 IPR011037 Pyruvate kinase-like, insert domain superfamily YPD4_1457 IPR040442 Pyruvate kinase-like domain superfamily YPD4_1457 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_1457 IPR015806 Pyruvate kinase, insert domain superfamily YPD4_1457 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPD4_1457 IPR001697 Pyruvate kinase YPD4_1458 IPR022913 Multidrug resistance protein MdtK YPD4_1458 IPR002528 Multi antimicrobial extrusion protein YPD4_1459 IPR022913 Multidrug resistance protein MdtK YPD4_1459 IPR002528 Multi antimicrobial extrusion protein YPD4_1460 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPD4_1460 IPR001783 Lumazine-binding protein YPD4_1460 IPR017938 Riboflavin synthase-like beta-barrel YPD4_1460 IPR026017 Lumazine-binding domain YPD4_1461 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1461 IPR003333 Mycolic acid cyclopropane synthase YPD4_1462 IPR020846 Major facilitator superfamily domain YPD4_1462 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPD4_1462 IPR011701 Major facilitator superfamily YPD4_1462 IPR036259 MFS transporter superfamily YPD4_1463 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1463 IPR005119 LysR, substrate-binding YPD4_1463 IPR000847 Transcription regulator HTH, LysR YPD4_1463 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1464 IPR023588 Transcription regulator HTH, PurR YPD4_1464 IPR000843 LacI-type HTH domain YPD4_1464 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_1464 IPR028082 Periplasmic binding protein-like I YPD4_1465 IPR001189 Manganese/iron superoxide dismutase YPD4_1465 IPR019833 Manganese/iron superoxide dismutase, binding site YPD4_1465 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPD4_1465 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPD4_1465 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPD4_1465 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPD4_1466 IPR038765 Papain-like cysteine peptidase superfamily YPD4_1466 IPR000064 Endopeptidase, NLPC/P60 domain YPD4_1467 IPR002109 Glutaredoxin YPD4_1467 IPR036249 Thioredoxin-like superfamily YPD4_1467 IPR014434 Monothiol glutaredoxin YPD4_1467 IPR004480 Monothiol glutaredoxin-related YPD4_1467 IPR033658 Glutaredoxin, PICOT-like YPD4_1468 IPR036397 Ribonuclease H superfamily YPD4_1468 IPR013520 Exonuclease, RNase T/DNA polymerase III YPD4_1468 IPR005987 Ribonuclease T YPD4_1468 IPR012337 Ribonuclease H-like superfamily YPD4_1469 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPD4_1469 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPD4_1469 IPR004361 Glyoxalase I YPD4_1469 IPR018146 Glyoxalase I, conserved site YPD4_1469 IPR037523 Vicinal oxygen chelate (VOC) domain YPD4_1470 IPR022385 Rhs repeat-associated core YPD4_1470 IPR041508 Toxin complex C-like repeat YPD4_1470 IPR025968 YwqJ-like deaminase YPD4_1471 IPR013785 Aldolase-type TIM barrel YPD4_1471 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPD4_1472 IPR011075 Tetracyclin repressor-like, C-terminal domain YPD4_1472 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPD4_1472 IPR009057 Homeobox-like domain superfamily YPD4_1472 IPR001647 DNA-binding HTH domain, TetR-type YPD4_1473 IPR040423 Phosphoethanolamine transferase YPD4_1473 IPR000917 Sulfatase, N-terminal YPD4_1473 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_1473 IPR012549 Phosphoethanolamine transferase, N-terminal YPD4_1474 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_1474 IPR023210 NADP-dependent oxidoreductase domain YPD4_1474 IPR020471 Aldo/keto reductase YPD4_1475 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1475 IPR023071 Transcriptional regulator, SlyA YPD4_1475 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1475 IPR000835 MarR-type HTH domain YPD4_1475 IPR023187 Transcriptional regulator MarR-type, conserved site YPD4_1476 IPR008816 Glycine zipper 2TM domain YPD4_1477 IPR005338 Anhydro-N-acetylmuramic acid kinase YPD4_1478 IPR036328 C-type lysozyme inhibitor superfamily YPD4_1478 IPR018660 C-type lysozyme inhibitor YPD4_1479 IPR012349 FMN-binding split barrel YPD4_1479 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YPD4_1479 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YPD4_1479 IPR000659 Pyridoxamine 5'-phosphate oxidase YPD4_1479 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative YPD4_1480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_1480 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_1480 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPD4_1480 IPR024088 Tyrosine-tRNA ligase, bacterial-type YPD4_1480 IPR002307 Tyrosine-tRNA ligase YPD4_1480 IPR036986 RNA-binding S4 domain superfamily YPD4_1480 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YPD4_1480 IPR002942 RNA-binding S4 domain YPD4_1481 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPD4_1481 IPR029056 Ribokinase-like YPD4_1481 IPR004625 Pyridoxine kinase YPD4_1481 IPR023685 Pyridoxal kinase PdxY YPD4_1482 IPR004046 Glutathione S-transferase, C-terminal YPD4_1482 IPR040079 Glutathione Transferase family YPD4_1482 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPD4_1482 IPR010987 Glutathione S-transferase, C-terminal-like YPD4_1482 IPR036249 Thioredoxin-like superfamily YPD4_1482 IPR004045 Glutathione S-transferase, N-terminal YPD4_1483 IPR006977 Yip1 domain YPD4_1484 IPR000109 Proton-dependent oligopeptide transporter family YPD4_1484 IPR036259 MFS transporter superfamily YPD4_1484 IPR005279 Dipeptide/tripeptide permease YPD4_1484 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YPD4_1484 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPD4_1485 IPR029032 AhpD-like YPD4_1486 IPR003439 ABC transporter-like YPD4_1486 IPR003593 AAA+ ATPase domain YPD4_1486 IPR017871 ABC transporter, conserved site YPD4_1486 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1487 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1487 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_1487 IPR003439 ABC transporter-like YPD4_1487 IPR003593 AAA+ ATPase domain YPD4_1488 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPD4_1488 IPR035906 MetI-like superfamily YPD4_1488 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1489 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1489 IPR035906 MetI-like superfamily YPD4_1490 IPR039424 Solute-binding protein family 5 YPD4_1490 IPR000914 Solute-binding protein family 5 domain YPD4_1490 IPR030678 Peptide/nickel binding protein, MppA-type YPD4_1490 IPR023765 Solute-binding protein family 5, conserved site YPD4_1492 IPR009057 Homeobox-like domain superfamily YPD4_1492 IPR014317 Transcription activator PspF YPD4_1492 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_1492 IPR002078 RNA polymerase sigma factor 54 interaction domain YPD4_1492 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1492 IPR025944 Sigma-54 interaction domain, conserved site YPD4_1492 IPR003593 AAA+ ATPase domain YPD4_1492 IPR002197 DNA binding HTH domain, Fis-type YPD4_1493 IPR007157 PspA/IM30 YPD4_1493 IPR014319 Phage shock protein, PspA YPD4_1494 IPR014320 Phage shock protein, PspC YPD4_1494 IPR007168 Phage shock protein, PspC, N-terminal YPD4_1495 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPD4_1496 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPD4_1497 IPR006507 Uncharacterised protein family UPF0283 YPD4_1497 IPR021147 Protein of unknown function DUF697 YPD4_1500 IPR025944 Sigma-54 interaction domain, conserved site YPD4_1500 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1500 IPR030828 TyrR family, helix-turn-helix domain YPD4_1500 IPR009057 Homeobox-like domain superfamily YPD4_1500 IPR002912 ACT domain YPD4_1500 IPR003593 AAA+ ATPase domain YPD4_1500 IPR000014 PAS domain YPD4_1500 IPR002078 RNA polymerase sigma factor 54 interaction domain YPD4_1500 IPR035965 PAS domain superfamily YPD4_1500 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPD4_1500 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_1501 IPR036515 Transposase IS200-like superfamily YPD4_1501 IPR002686 Transposase IS200-like YPD4_1502 IPR036249 Thioredoxin-like superfamily YPD4_1502 IPR013766 Thioredoxin domain YPD4_1502 IPR018219 Thiol peroxidase conserved site YPD4_1502 IPR002065 Thiol peroxidase Tpx YPD4_1502 IPR013740 Redoxin YPD4_1503 IPR002611 IstB-like ATP-binding protein YPD4_1503 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1503 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1503 IPR003593 AAA+ ATPase domain YPD4_1503 IPR001270 ClpA/B family YPD4_1504 IPR006120 Resolvase, HTH domain YPD4_1504 IPR001584 Integrase, catalytic core YPD4_1504 IPR012337 Ribonuclease H-like superfamily YPD4_1504 IPR036397 Ribonuclease H superfamily YPD4_1504 IPR017894 HTH domain, IS21 transposase-type YPD4_1507 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_1507 IPR001829 Pili assembly chaperone, bacterial YPD4_1507 IPR016148 Pili assembly chaperone, C-terminal YPD4_1507 IPR018046 Pili assembly chaperone, conserved site YPD4_1507 IPR016147 Pili assembly chaperone, N-terminal YPD4_1507 IPR013783 Immunoglobulin-like fold YPD4_1507 IPR008962 PapD-like superfamily YPD4_1510 IPR003399 Mce/MlaD YPD4_1511 IPR007498 Intermembrane transport protein PqiA-like YPD4_1511 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPD4_1511 IPR011031 Multihaem cytochrome YPD4_1512 IPR003018 GAF domain YPD4_1512 IPR029016 GAF-like domain superfamily YPD4_1512 IPR000614 Free Met sulfoxide reductase conserved site YPD4_1513 IPR036442 ProQ/FinO domain superfamily YPD4_1513 IPR016103 ProQ/FinO domain YPD4_1513 IPR035236 RNA chaperone ProQ, C-terminal YPD4_1513 IPR023529 RNA chaperone ProQ YPD4_1514 IPR029045 ClpP/crotonase-like domain superfamily YPD4_1514 IPR001478 PDZ domain YPD4_1514 IPR005151 Tail specific protease YPD4_1514 IPR004447 C-terminal-processing peptidase S41A YPD4_1514 IPR020992 Tail specific protease, C-terminal YPD4_1514 IPR040573 Tail specific protease, N-terminal domain YPD4_1514 IPR036034 PDZ superfamily YPD4_1515 IPR001915 Peptidase M48 YPD4_1515 IPR022919 Peptidase M48, protease HtpX, putative YPD4_1516 IPR008966 Adhesion domain superfamily YPD4_1516 IPR036937 Fimbrial-type adhesion domain superfamily YPD4_1516 IPR000259 Fimbrial-type adhesion domain YPD4_1517 IPR013783 Immunoglobulin-like fold YPD4_1517 IPR008962 PapD-like superfamily YPD4_1517 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_1517 IPR001829 Pili assembly chaperone, bacterial YPD4_1517 IPR018046 Pili assembly chaperone, conserved site YPD4_1517 IPR016147 Pili assembly chaperone, N-terminal YPD4_1517 IPR016148 Pili assembly chaperone, C-terminal YPD4_1518 IPR037224 PapC, N-terminal domain superfamily YPD4_1518 IPR025885 PapC, N-terminal domain YPD4_1518 IPR000015 Outer membrane usher protein YPD4_1518 IPR025949 PapC-like, C-terminal domain YPD4_1518 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_1518 IPR018030 Fimbrial membrane usher, conserved site YPD4_1520 IPR016147 Pili assembly chaperone, N-terminal YPD4_1520 IPR016148 Pili assembly chaperone, C-terminal YPD4_1520 IPR001829 Pili assembly chaperone, bacterial YPD4_1520 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_1520 IPR018046 Pili assembly chaperone, conserved site YPD4_1520 IPR008962 PapD-like superfamily YPD4_1520 IPR013783 Immunoglobulin-like fold YPD4_1521 IPR036259 MFS transporter superfamily YPD4_1521 IPR020846 Major facilitator superfamily domain YPD4_1521 IPR011701 Major facilitator superfamily YPD4_1522 IPR011701 Major facilitator superfamily YPD4_1522 IPR020846 Major facilitator superfamily domain YPD4_1522 IPR036259 MFS transporter superfamily YPD4_1523 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPD4_1523 IPR027946 Oligogalacturonate lyase domain YPD4_1524 IPR029016 GAF-like domain superfamily YPD4_1524 IPR014757 Transcription regulator IclR, C-terminal YPD4_1524 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1524 IPR005471 Transcription regulator IclR, N-terminal YPD4_1524 IPR011991 ArsR-like helix-turn-helix domain YPD4_1524 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1525 IPR036365 PGBD-like superfamily YPD4_1525 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPD4_1525 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPD4_1525 IPR036366 PGBD superfamily YPD4_1527 IPR016956 Inner membrane protein YdjM YPD4_1527 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPD4_1528 IPR009331 Oligogalacturonate-specific porin YPD4_1529 IPR006059 Bacterial extracellular solute-binding protein YPD4_1530 IPR005116 Transport-associated OB, type 1 YPD4_1530 IPR003439 ABC transporter-like YPD4_1530 IPR003593 AAA+ ATPase domain YPD4_1530 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1530 IPR017871 ABC transporter, conserved site YPD4_1530 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_1530 IPR040582 MalK, OB fold domain YPD4_1531 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1531 IPR035906 MetI-like superfamily YPD4_1532 IPR035906 MetI-like superfamily YPD4_1532 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1533 IPR010702 Periplasmic pectate lyase YPD4_1534 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1534 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPD4_1534 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1534 IPR036291 NAD(P)-binding domain superfamily YPD4_1535 IPR011051 RmlC-like cupin domain superfamily YPD4_1535 IPR014710 RmlC-like jelly roll fold YPD4_1535 IPR021120 KduI/IolB isomerase YPD4_1535 IPR007045 5-keto 4-deoxyuronate isomerase YPD4_1535 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal YPD4_1536 IPR013096 Cupin 2, conserved barrel YPD4_1536 IPR025499 Pectin degradation protein KdgF YPD4_1536 IPR014710 RmlC-like jelly roll fold YPD4_1536 IPR011051 RmlC-like cupin domain superfamily YPD4_1537 IPR001207 Transposase, mutator type YPD4_1538 IPR000843 LacI-type HTH domain YPD4_1538 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPD4_1538 IPR028082 Periplasmic binding protein-like I YPD4_1538 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_1539 IPR006120 Resolvase, HTH domain YPD4_1539 IPR017894 HTH domain, IS21 transposase-type YPD4_1539 IPR012337 Ribonuclease H-like superfamily YPD4_1539 IPR036397 Ribonuclease H superfamily YPD4_1539 IPR001584 Integrase, catalytic core YPD4_1540 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1540 IPR001270 ClpA/B family YPD4_1540 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1540 IPR002611 IstB-like ATP-binding protein YPD4_1540 IPR003593 AAA+ ATPase domain YPD4_1541 IPR024079 Metallopeptidase, catalytic domain superfamily YPD4_1541 IPR010384 MtfA family YPD4_1541 IPR042252 MtfA, N-terminal YPD4_1543 IPR003439 ABC transporter-like YPD4_1543 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1543 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1543 IPR017871 ABC transporter, conserved site YPD4_1543 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1543 IPR039421 Type I protein exporter YPD4_1543 IPR003593 AAA+ ATPase domain YPD4_1544 IPR020449 Transcription regulator HTH, AraC- type YPD4_1544 IPR018062 HTH domain AraC-type, conserved site YPD4_1544 IPR018060 DNA binding HTH domain, AraC-type YPD4_1544 IPR009057 Homeobox-like domain superfamily YPD4_1545 IPR004840 Amino acid permease, conserved site YPD4_1545 IPR004841 Amino acid permease/ SLC12A domain YPD4_1546 IPR004840 Amino acid permease, conserved site YPD4_1546 IPR004841 Amino acid permease/ SLC12A domain YPD4_1547 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YPD4_1547 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_1549 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1549 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YPD4_1549 IPR025714 Methyltransferase domain YPD4_1550 IPR001633 EAL domain YPD4_1550 IPR035919 EAL domain superfamily YPD4_1550 IPR000160 GGDEF domain YPD4_1550 IPR013655 PAS fold-3 YPD4_1550 IPR013656 PAS fold-4 YPD4_1550 IPR001610 PAC motif YPD4_1550 IPR000014 PAS domain YPD4_1550 IPR000700 PAS-associated, C-terminal YPD4_1550 IPR035965 PAS domain superfamily YPD4_1550 IPR007895 MASE1 YPD4_1550 IPR029787 Nucleotide cyclase YPD4_1551 IPR012910 TonB-dependent receptor, plug domain YPD4_1551 IPR010917 TonB-dependent receptor, conserved site YPD4_1551 IPR010105 TonB-dependent siderophore receptor YPD4_1551 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_1551 IPR030149 TonB-dependent siderophore receptor FcuA/FatA YPD4_1551 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_1551 IPR039423 TonB-dependent receptor-like YPD4_1551 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_1551 IPR010916 TonB box, conserved site YPD4_1552 IPR003810 Putative manganese efflux pump YPD4_1552 IPR022929 Putative manganese efflux pump MntP YPD4_1553 IPR009328 Protein of unknown function DUF986 YPD4_1554 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPD4_1555 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPD4_1556 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPD4_1556 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPD4_1556 IPR033887 PTS system mannose/sorbose specific IIA subunit YPD4_1556 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPD4_1556 IPR004701 Phosphotransferase system, mannose-type IIA component YPD4_1556 IPR013789 Phosphotransferase system, mannose family IIA component YPD4_1556 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPD4_1557 IPR000644 CBS domain YPD4_1557 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_1557 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_1557 IPR005496 Integral membrane protein TerC YPD4_1557 IPR005170 Transporter-associated domain YPD4_1558 IPR012712 HTH-type transcriptional regulator HpaR/FarR YPD4_1558 IPR000835 MarR-type HTH domain YPD4_1558 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1558 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1558 IPR023187 Transcriptional regulator MarR-type, conserved site YPD4_1559 IPR011234 Fumarylacetoacetase-like, C-terminal YPD4_1559 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPD4_1559 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPD4_1559 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPD4_1560 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPD4_1560 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPD4_1560 IPR011234 Fumarylacetoacetase-like, C-terminal YPD4_1560 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPD4_1561 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPD4_1561 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YPD4_1561 IPR015590 Aldehyde dehydrogenase domain YPD4_1561 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_1561 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_1561 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_1561 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1562 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPD4_1562 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase YPD4_1563 IPR014347 Tautomerase/MIF superfamily YPD4_1563 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YPD4_1564 IPR011234 Fumarylacetoacetase-like, C-terminal YPD4_1564 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPD4_1564 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase YPD4_1565 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_1565 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YPD4_1565 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales YPD4_1565 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPD4_1565 IPR040442 Pyruvate kinase-like domain superfamily YPD4_1566 IPR020846 Major facilitator superfamily domain YPD4_1566 IPR011701 Major facilitator superfamily YPD4_1566 IPR036259 MFS transporter superfamily YPD4_1567 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPD4_1567 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPD4_1567 IPR004925 HpaB/PvcC/4-BUDH YPD4_1567 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPD4_1567 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPD4_1567 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YPD4_1567 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPD4_1568 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component YPD4_1568 IPR012349 FMN-binding split barrel YPD4_1568 IPR002563 Flavin reductase like domain YPD4_1569 IPR005131 Serine dehydratase beta chain YPD4_1569 IPR029009 Allosteric substrate binding domain superfamily YPD4_1569 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YPD4_1569 IPR005130 Serine dehydratase-like, alpha subunit YPD4_1570 IPR000059 NUDIX hydrolase, NudL, conserved site YPD4_1570 IPR000086 NUDIX hydrolase domain YPD4_1570 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_1570 IPR023735 Uncharacterised nudix hydrolase NudL YPD4_1571 IPR005802 Aminodeoxychorismate synthase, component I YPD4_1571 IPR005801 ADC synthase YPD4_1571 IPR019999 Anthranilate synthase component I-like YPD4_1571 IPR015890 Chorismate-utilising enzyme, C-terminal YPD4_1571 IPR006805 Anthranilate synthase component I, N-terminal YPD4_1572 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPD4_1572 IPR013815 ATP-grasp fold, subdomain 1 YPD4_1572 IPR016185 Pre-ATP-grasp domain superfamily YPD4_1572 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase YPD4_1572 IPR011761 ATP-grasp fold YPD4_1572 IPR011054 Rudiment single hybrid motif YPD4_1573 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPD4_1573 IPR011545 DEAD/DEAH box helicase domain YPD4_1573 IPR028619 ATP-dependent RNA helicase DbpA YPD4_1573 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_1573 IPR001650 Helicase, C-terminal YPD4_1573 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPD4_1573 IPR014014 RNA helicase, DEAD-box type, Q motif YPD4_1573 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1573 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPD4_1574 IPR009813 Uncharacterised protein family YebG YPD4_1574 IPR038627 YebG-like superfamily YPD4_1576 IPR020236 Uncharacterised protein family YebF YPD4_1576 IPR025603 YebF/Colicin-M immunity protein YPD4_1576 IPR038703 YebF/Cmi superfamily YPD4_1577 IPR002470 Peptidase S9A, prolyl oligopeptidase YPD4_1577 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPD4_1577 IPR023302 Peptidase S9A, N-terminal domain YPD4_1577 IPR002471 Peptidase S9, serine active site YPD4_1577 IPR029058 Alpha/Beta hydrolase fold YPD4_1578 IPR005944 Proline iminopeptidase YPD4_1578 IPR002410 Peptidase S33 YPD4_1578 IPR000073 Alpha/beta hydrolase fold-1 YPD4_1578 IPR029058 Alpha/Beta hydrolase fold YPD4_1579 IPR001519 Ferritin YPD4_1579 IPR012347 Ferritin-like YPD4_1579 IPR008331 Ferritin/DPS protein domain YPD4_1579 IPR009078 Ferritin-like superfamily YPD4_1579 IPR041719 Ferritin, prokaryotic-type YPD4_1579 IPR009040 Ferritin-like diiron domain YPD4_1580 IPR032694 Copper transport protein C/D YPD4_1580 IPR014756 Immunoglobulin E-set YPD4_1580 IPR007348 CopC domain YPD4_1582 IPR019648 Protein of unknown function DUF2511 YPD4_1585 IPR006136 Flagellar biosynthetic protein FlhB YPD4_1585 IPR006135 Type III secretion system substrate exporter YPD4_1585 IPR029025 Type III secretion system substrate exporter, C-terminal YPD4_1586 IPR001712 Type III secretion system FHIPEP YPD4_1586 IPR006301 Flagellar biosynthesis protein FlhA YPD4_1586 IPR025505 FHIPEP conserved site YPD4_1586 IPR042196 FHIPEP, domain 4 YPD4_1586 IPR042193 FHIPEP, domain 3 YPD4_1586 IPR042194 FHIPEP, domain 1 YPD4_1587 IPR009420 Flagellar protein FlhE YPD4_1588 IPR038177 Inverse autotransporter, beta-domain superfamily YPD4_1588 IPR024519 Inverse autotransporter, beta-domain YPD4_1588 IPR016187 C-type lectin fold YPD4_1588 IPR016186 C-type lectin-like/link domain superfamily YPD4_1588 IPR015217 Invasin, domain 3 YPD4_1588 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPD4_1588 IPR008964 Invasin/intimin cell-adhesion fragments YPD4_1588 IPR013783 Immunoglobulin-like fold YPD4_1588 IPR013117 Intimin, C-terminal YPD4_1588 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPD4_1590 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPD4_1590 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPD4_1590 IPR016186 C-type lectin-like/link domain superfamily YPD4_1590 IPR015217 Invasin, domain 3 YPD4_1590 IPR008964 Invasin/intimin cell-adhesion fragments YPD4_1590 IPR024519 Inverse autotransporter, beta-domain YPD4_1590 IPR038177 Inverse autotransporter, beta-domain superfamily YPD4_1590 IPR013783 Immunoglobulin-like fold YPD4_1590 IPR013117 Intimin, C-terminal YPD4_1590 IPR016187 C-type lectin fold YPD4_1591 IPR007809 FlgN-like protein YPD4_1591 IPR036679 FlgN-like superfamily YPD4_1592 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPD4_1592 IPR007412 Anti-sigma-28 factor, FlgM YPD4_1592 IPR035890 Anti-sigma-28 factor FlgM superfamily YPD4_1593 IPR041231 FlgA, N-terminal YPD4_1593 IPR039246 Flagellar protein FlgA YPD4_1593 IPR013974 SAF domain YPD4_1593 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPD4_1594 IPR019776 Flagellar basal body rod protein, conserved site YPD4_1594 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_1594 IPR006300 Flagellar basal-body rod protein FlgB YPD4_1595 IPR006299 Flagellar basal-body rod protein FlgC YPD4_1595 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_1595 IPR019776 Flagellar basal body rod protein, conserved site YPD4_1595 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_1596 IPR025963 FlgD Tudor-like domain YPD4_1596 IPR005648 Flagellar hook capping protein YPD4_1596 IPR025965 FlgD Ig-like domain YPD4_1597 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPD4_1597 IPR011491 Flagellar hook protein FlgE YPD4_1597 IPR037058 Flagellar hook protein FlgE superfamily YPD4_1597 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_1597 IPR019776 Flagellar basal body rod protein, conserved site YPD4_1597 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_1597 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPD4_1598 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPD4_1598 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_1598 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPD4_1598 IPR019776 Flagellar basal body rod protein, conserved site YPD4_1598 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_1599 IPR019776 Flagellar basal body rod protein, conserved site YPD4_1599 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPD4_1599 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_1599 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPD4_1599 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_1599 IPR012834 Flagellar basal-body rod FlgG YPD4_1600 IPR000527 Flagellar L-ring protein YPD4_1601 IPR001782 Flagellar P-ring protein YPD4_1602 IPR013377 Peptidoglycan hydrolase FlgJ YPD4_1602 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YPD4_1602 IPR019301 Flagellar protein FlgJ, N-terminal YPD4_1603 IPR001444 Flagellar basal body rod protein, N-terminal YPD4_1603 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPD4_1603 IPR002371 Flagellar hook-associated protein 1 YPD4_1604 IPR013384 Flagellar hook-associated protein 3 YPD4_1604 IPR001029 Flagellin, D0/D1 domain YPD4_1605 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1605 IPR007324 Sugar-binding domain, putative YPD4_1605 IPR013324 RNA polymerase sigma factor, region 3/4-like YPD4_1605 IPR037171 NagB/RpiA transferase-like YPD4_1606 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPD4_1606 IPR001303 Class II aldolase/adducin N-terminal YPD4_1606 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1606 IPR036291 NAD(P)-binding domain superfamily YPD4_1606 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YPD4_1607 IPR001851 ABC transporter, permease YPD4_1608 IPR025997 Periplasmic binding protein YPD4_1608 IPR028082 Periplasmic binding protein-like I YPD4_1608 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPD4_1609 IPR003439 ABC transporter-like YPD4_1609 IPR017871 ABC transporter, conserved site YPD4_1609 IPR003593 AAA+ ATPase domain YPD4_1609 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1609 IPR015861 ABC transporter, ribose import, RbsA YPD4_1610 IPR001851 ABC transporter, permease YPD4_1611 IPR002139 Ribokinase/fructokinase YPD4_1611 IPR011611 Carbohydrate kinase PfkB YPD4_1611 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_1611 IPR030877 Sulfofructose kinase YPD4_1611 IPR029056 Ribokinase-like YPD4_1613 IPR006303 Flagellar biosynthesis protein FliR YPD4_1613 IPR002010 Type III secretion system inner membrane R protein YPD4_1614 IPR005837 Flagellar transport protein FliP YPD4_1614 IPR005838 Type III secretion system inner membrane P protein YPD4_1615 IPR022781 Flagellar biosynthesis protein, FliO YPD4_1616 IPR036429 SpoA-like superfamily YPD4_1616 IPR001543 Surface presentation of antigen (SpoA) YPD4_1616 IPR012826 Flagellar motor switch FliN YPD4_1616 IPR031576 Flagellar motor switch protein FliN, N-terminal YPD4_1616 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPD4_1617 IPR001543 Surface presentation of antigen (SpoA) YPD4_1617 IPR028976 CheC-like superfamily YPD4_1617 IPR036429 SpoA-like superfamily YPD4_1617 IPR001689 Flagellar motor switch protein FliM YPD4_1618 IPR005503 Flagellar basal body-associated protein FliL YPD4_1619 IPR021136 Flagellar hook-length control protein-like, C-terminal YPD4_1619 IPR001635 Flagellar hook-length control protein FliK YPD4_1619 IPR038610 FliK-like, C-terminal domain superfamily YPD4_1620 IPR018006 Flagellar FliJ, proteobacteria YPD4_1620 IPR012823 Flagellar export FliJ YPD4_1621 IPR005714 ATPase, type III secretion system, FliI/YscN YPD4_1621 IPR040627 T3SS EscN ATPase, C-terminal YPD4_1621 IPR003593 AAA+ ATPase domain YPD4_1621 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1621 IPR020005 Flagellar export ATPase FliI, clade 1 YPD4_1621 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPD4_1621 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_1621 IPR032463 ATPase, type III secretion system, FliI YPD4_1622 IPR020005 Flagellar export ATPase FliI, clade 1 YPD4_1622 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_1622 IPR032463 ATPase, type III secretion system, FliI YPD4_1622 IPR005714 ATPase, type III secretion system, FliI/YscN YPD4_1622 IPR003593 AAA+ ATPase domain YPD4_1622 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1622 IPR040627 T3SS EscN ATPase, C-terminal YPD4_1622 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPD4_1623 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPD4_1623 IPR000563 Flagellar assembly protein FliH YPD4_1624 IPR000090 Flagellar motor switch protein FliG YPD4_1624 IPR023087 Flagellar motor switch protein FliG, C-terminal YPD4_1624 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPD4_1624 IPR032779 Flagellar motor switch protein FliG, middle domain YPD4_1624 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPD4_1625 IPR000067 Flagellar M-ring protein FliF YPD4_1625 IPR013556 Flagellar M-ring C-terminal YPD4_1625 IPR006182 Secretory protein YscJ/FliF YPD4_1626 IPR001624 Flagellar hook-basal body complex protein FliE YPD4_1627 IPR003265 HhH-GPD domain YPD4_1627 IPR011257 DNA glycosylase YPD4_1628 IPR006675 HDIG domain YPD4_1628 IPR003607 HD/PDEase domain YPD4_1628 IPR006674 HD domain YPD4_1628 IPR037522 HD-GYP domain YPD4_1629 IPR029787 Nucleotide cyclase YPD4_1629 IPR003660 HAMP domain YPD4_1629 IPR033479 Double Cache domain 1 YPD4_1629 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase YPD4_1629 IPR029151 Periplasmic sensor-like domain superfamily YPD4_1630 IPR020449 Transcription regulator HTH, AraC- type YPD4_1630 IPR018062 HTH domain AraC-type, conserved site YPD4_1630 IPR018060 DNA binding HTH domain, AraC-type YPD4_1630 IPR009057 Homeobox-like domain superfamily YPD4_1631 IPR003713 Flagellar protein FliS YPD4_1631 IPR036584 Flagellar protein FliS superfamily YPD4_1632 IPR010810 Flagellin hook, IN motif YPD4_1632 IPR010809 Flagellar hook-associated protein 2, C-terminal YPD4_1632 IPR040026 Flagellar hook-associated protein 2 YPD4_1632 IPR003481 Flagellar hook-associated protein 2, N-terminal YPD4_1633 IPR001029 Flagellin, D0/D1 domain YPD4_1633 IPR001492 Flagellin YPD4_1633 IPR014981 Flagellin D3 YPD4_1634 IPR014284 RNA polymerase sigma-70 like domain YPD4_1634 IPR028617 RNA polymerase sigma factor FliA YPD4_1634 IPR007627 RNA polymerase sigma-70 region 2 YPD4_1634 IPR007624 RNA polymerase sigma-70 region 3 YPD4_1634 IPR007630 RNA polymerase sigma-70 region 4 YPD4_1634 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPD4_1634 IPR013325 RNA polymerase sigma factor, region 2 YPD4_1634 IPR013324 RNA polymerase sigma factor, region 3/4-like YPD4_1634 IPR000943 RNA polymerase sigma-70 YPD4_1635 IPR004107 Integrase, SAM-like, N-terminal YPD4_1635 IPR022523 Flagellar regulator, FliZ YPD4_1636 IPR023702 D-cysteine desulphhydrase, bacterial YPD4_1636 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_1636 IPR005966 D-cysteine desulfhydrase YPD4_1636 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_1636 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPD4_1641 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1641 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YPD4_1641 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain YPD4_1641 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_1641 IPR024090 Proline dehydrogenase PutA, domain I YPD4_1641 IPR010985 Ribbon-helix-helix YPD4_1641 IPR024089 Proline dehydrogenase PutA, domain I/II YPD4_1641 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_1641 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPD4_1641 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_1641 IPR025703 Bifunctional protein PutA YPD4_1641 IPR024082 Proline dehydrogenase PutA, domain II YPD4_1641 IPR029041 FAD-linked oxidoreductase-like YPD4_1641 IPR002872 Proline dehydrogenase domain YPD4_1641 IPR015590 Aldehyde dehydrogenase domain YPD4_1641 IPR013321 Arc-type ribbon-helix-helix YPD4_1642 IPR038377 Sodium/glucose symporter superfamily YPD4_1642 IPR018212 Sodium/solute symporter, conserved site YPD4_1642 IPR001734 Sodium/solute symporter YPD4_1642 IPR011851 Sodium/proline symporter YPD4_1643 IPR004923 Iron permease FTR1/Fip1/EfeU YPD4_1644 IPR018976 Imelysin-like domain YPD4_1644 IPR038352 Imelysin-like domain superfamily YPD4_1644 IPR034981 EfeO/Algp7, imelysin-like domain YPD4_1644 IPR028096 EfeO-type cupredoxin-like domain YPD4_1644 IPR008972 Cupredoxin YPD4_1645 IPR006314 Dyp-type peroxidase YPD4_1645 IPR006313 Deferrochelatase/peroxidase EfeB YPD4_1645 IPR011008 Dimeric alpha-beta barrel YPD4_1645 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_1646 IPR005025 NADPH-dependent FMN reductase-like YPD4_1646 IPR010089 Flavoprotein WrbA-like YPD4_1646 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic YPD4_1646 IPR029039 Flavoprotein-like superfamily YPD4_1646 IPR008254 Flavodoxin/nitric oxide synthase YPD4_1647 IPR019936 Mutatrotase, YjhT-like YPD4_1647 IPR015915 Kelch-type beta propeller YPD4_1647 IPR006652 Kelch repeat type 1 YPD4_1648 IPR004841 Amino acid permease/ SLC12A domain YPD4_1648 IPR004840 Amino acid permease, conserved site YPD4_1649 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_1649 IPR000758 Virulence-related outer membrane protein YPD4_1649 IPR027385 Outer membrane protein beta-barrel domain YPD4_1650 IPR009707 Membrane protein GlpM/YdgC YPD4_1651 IPR011006 CheY-like superfamily YPD4_1651 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_1651 IPR001789 Signal transduction response regulator, receiver domain YPD4_1651 IPR000792 Transcription regulator LuxR, C-terminal YPD4_1652 IPR001943 UVR domain YPD4_1652 IPR036876 UVR domain superfamily YPD4_1652 IPR004791 UvrABC system, subunit C YPD4_1652 IPR001162 UvrC family homology region YPD4_1652 IPR035901 GIY-YIG endonuclease superfamily YPD4_1652 IPR038476 UvrC homology region 2 superfamily YPD4_1652 IPR000305 GIY-YIG endonuclease YPD4_1652 IPR010994 RuvA domain 2-like YPD4_1652 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPD4_1653 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YPD4_1653 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YPD4_1653 IPR000462 CDP-alcohol phosphatidyltransferase YPD4_1654 IPR036624 Hcp1-like superfamily YPD4_1654 IPR008514 Type VI secretion system effector, Hcp YPD4_1659 IPR001207 Transposase, mutator type YPD4_1660 IPR001207 Transposase, mutator type YPD4_1664 IPR036291 NAD(P)-binding domain superfamily YPD4_1664 IPR004104 Oxidoreductase, C-terminal YPD4_1664 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase YPD4_1664 IPR000683 Oxidoreductase, N-terminal YPD4_1666 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1666 IPR035906 MetI-like superfamily YPD4_1667 IPR035906 MetI-like superfamily YPD4_1667 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1668 IPR003593 AAA+ ATPase domain YPD4_1668 IPR003439 ABC transporter-like YPD4_1668 IPR017871 ABC transporter, conserved site YPD4_1668 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPD4_1668 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_1668 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1668 IPR013611 Transport-associated OB, type 2 YPD4_1669 IPR017894 HTH domain, IS21 transposase-type YPD4_1669 IPR001584 Integrase, catalytic core YPD4_1669 IPR006120 Resolvase, HTH domain YPD4_1669 IPR012337 Ribonuclease H-like superfamily YPD4_1669 IPR036397 Ribonuclease H superfamily YPD4_1670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1670 IPR003593 AAA+ ATPase domain YPD4_1670 IPR001270 ClpA/B family YPD4_1670 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1670 IPR002611 IstB-like ATP-binding protein YPD4_1673 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_1673 IPR012910 TonB-dependent receptor, plug domain YPD4_1673 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_1673 IPR010105 TonB-dependent siderophore receptor YPD4_1673 IPR039426 Vitamin B12 transporter BtuB-like YPD4_1674 IPR020845 AMP-binding, conserved site YPD4_1674 IPR000873 AMP-dependent synthetase/ligase YPD4_1674 IPR011963 2,3-dihydroxybenzoate-AMP ligase YPD4_1674 IPR025110 AMP-binding enzyme, C-terminal domain YPD4_1675 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPD4_1675 IPR020802 Polyketide synthase, thioesterase domain YPD4_1675 IPR001031 Thioesterase YPD4_1675 IPR029058 Alpha/Beta hydrolase fold YPD4_1677 IPR036736 ACP-like superfamily YPD4_1677 IPR009081 Phosphopantetheine binding ACP domain YPD4_1677 IPR001227 Acyl transferase domain superfamily YPD4_1677 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPD4_1677 IPR032821 Ketoacyl-synthetase, C-terminal extension YPD4_1677 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_1677 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_1677 IPR018201 Beta-ketoacyl synthase, active site YPD4_1677 IPR001242 Condensation domain YPD4_1677 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_1677 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPD4_1677 IPR014043 Acyl transferase YPD4_1677 IPR016039 Thiolase-like YPD4_1677 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPD4_1677 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_1678 IPR013217 Methyltransferase type 12 YPD4_1678 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1678 IPR006162 Phosphopantetheine attachment site YPD4_1678 IPR020845 AMP-binding, conserved site YPD4_1678 IPR009081 Phosphopantetheine binding ACP domain YPD4_1678 IPR010071 Amino acid adenylation domain YPD4_1678 IPR000873 AMP-dependent synthetase/ligase YPD4_1678 IPR042099 AMP-dependent synthetase-like superfamily YPD4_1678 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPD4_1678 IPR036736 ACP-like superfamily YPD4_1678 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_1678 IPR001242 Condensation domain YPD4_1680 IPR003593 AAA+ ATPase domain YPD4_1680 IPR017871 ABC transporter, conserved site YPD4_1680 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1680 IPR003439 ABC transporter-like YPD4_1680 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_1680 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1680 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1680 IPR013113 FAD-binding 9, siderophore-interacting YPD4_1680 IPR017938 Riboflavin synthase-like beta-barrel YPD4_1680 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_1680 IPR007037 Siderophore-interacting protein, C-terminal domain YPD4_1681 IPR011917 ABC transporter, lipid A export, MsbA YPD4_1681 IPR017871 ABC transporter, conserved site YPD4_1681 IPR003439 ABC transporter-like YPD4_1681 IPR039421 Type I protein exporter YPD4_1681 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1681 IPR003593 AAA+ ATPase domain YPD4_1681 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1681 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1682 IPR011701 Major facilitator superfamily YPD4_1682 IPR036259 MFS transporter superfamily YPD4_1682 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPD4_1683 IPR005801 ADC synthase YPD4_1683 IPR015890 Chorismate-utilising enzyme, C-terminal YPD4_1683 IPR019996 Salicylate synthase YPD4_1683 IPR019999 Anthranilate synthase component I-like YPD4_1684 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_1684 IPR013762 Integrase-like, catalytic domain superfamily YPD4_1684 IPR010998 Integrase/recombinase, N-terminal YPD4_1684 IPR025166 Integrase, DNA-binding domain YPD4_1684 IPR038488 Integrase, DNA-binding domain superfamily YPD4_1684 IPR002104 Integrase, catalytic domain YPD4_1685 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_1685 IPR018046 Pili assembly chaperone, conserved site YPD4_1685 IPR016147 Pili assembly chaperone, N-terminal YPD4_1685 IPR001829 Pili assembly chaperone, bacterial YPD4_1685 IPR008962 PapD-like superfamily YPD4_1685 IPR013783 Immunoglobulin-like fold YPD4_1685 IPR016148 Pili assembly chaperone, C-terminal YPD4_1688 IPR025949 PapC-like, C-terminal domain YPD4_1688 IPR018030 Fimbrial membrane usher, conserved site YPD4_1688 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_1688 IPR000015 Outer membrane usher protein YPD4_1688 IPR037224 PapC, N-terminal domain superfamily YPD4_1688 IPR025885 PapC, N-terminal domain YPD4_1689 IPR018046 Pili assembly chaperone, conserved site YPD4_1689 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_1689 IPR016148 Pili assembly chaperone, C-terminal YPD4_1689 IPR008962 PapD-like superfamily YPD4_1689 IPR013783 Immunoglobulin-like fold YPD4_1689 IPR016147 Pili assembly chaperone, N-terminal YPD4_1689 IPR001829 Pili assembly chaperone, bacterial YPD4_1691 IPR005467 Histidine kinase domain YPD4_1691 IPR001789 Signal transduction response regulator, receiver domain YPD4_1691 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_1691 IPR013767 PAS fold YPD4_1691 IPR035965 PAS domain superfamily YPD4_1691 IPR000700 PAS-associated, C-terminal YPD4_1691 IPR011006 CheY-like superfamily YPD4_1691 IPR000014 PAS domain YPD4_1691 IPR036641 HPT domain superfamily YPD4_1691 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_1691 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_1691 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_1691 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_1691 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPD4_1691 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_1692 IPR000792 Transcription regulator LuxR, C-terminal YPD4_1692 IPR001789 Signal transduction response regulator, receiver domain YPD4_1692 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_1692 IPR011006 CheY-like superfamily YPD4_1693 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily YPD4_1693 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPD4_1693 IPR037171 NagB/RpiA transferase-like YPD4_1693 IPR003702 Acetyl-CoA hydrolase/transferase YPD4_1694 IPR002539 MaoC-like dehydratase domain YPD4_1694 IPR029069 HotDog domain superfamily YPD4_1694 IPR016790 Thiol ester hydratase, Rv0216, predicted YPD4_1695 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPD4_1695 IPR040442 Pyruvate kinase-like domain superfamily YPD4_1695 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_1695 IPR011206 Citrate lyase beta subunit-like YPD4_1696 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1696 IPR005119 LysR, substrate-binding YPD4_1696 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain YPD4_1696 IPR000847 Transcription regulator HTH, LysR YPD4_1696 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1700 IPR032466 Metal-dependent hydrolase YPD4_1700 IPR006680 Amidohydrolase-related YPD4_1702 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPD4_1702 IPR003667 NqrDE/RnfAE YPD4_1703 IPR004839 Aminotransferase, class I/classII YPD4_1703 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1703 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1703 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1704 IPR004841 Amino acid permease/ SLC12A domain YPD4_1704 IPR004840 Amino acid permease, conserved site YPD4_1705 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1705 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1705 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPD4_1705 IPR037171 NagB/RpiA transferase-like YPD4_1705 IPR001034 DeoR-type HTH domain YPD4_1705 IPR014036 DeoR C-terminal sensor domain YPD4_1706 IPR012338 Beta-lactamase/transpeptidase-like YPD4_1706 IPR015868 Glutaminase YPD4_1708 IPR004923 Iron permease FTR1/Fip1/EfeU YPD4_1709 IPR018470 Periplasmic metal-binding protein Tp34-type YPD4_1709 IPR038482 Periplasmic metal-binding protein tp34-type superfamily YPD4_1711 IPR003838 ABC transporter permease protein domain YPD4_1711 IPR003593 AAA+ ATPase domain YPD4_1711 IPR025857 MacB-like periplasmic core domain YPD4_1711 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1711 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPD4_1711 IPR003439 ABC transporter-like YPD4_1711 IPR017871 ABC transporter, conserved site YPD4_1713 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPD4_1713 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1713 IPR025857 MacB-like periplasmic core domain YPD4_1713 IPR017871 ABC transporter, conserved site YPD4_1713 IPR003838 ABC transporter permease protein domain YPD4_1713 IPR003439 ABC transporter-like YPD4_1713 IPR003593 AAA+ ATPase domain YPD4_1714 IPR013766 Thioredoxin domain YPD4_1714 IPR036249 Thioredoxin-like superfamily YPD4_1714 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPD4_1714 IPR023555 Thiol-disulphide oxidoreductase ResA YPD4_1716 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPD4_1716 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1716 IPR015392 Domain of unknown function DUF1971 YPD4_1716 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPD4_1716 IPR014710 RmlC-like jelly roll fold YPD4_1716 IPR004537 Tellurite resistance methyltransferase, TehB YPD4_1717 IPR000994 Peptidase M24 YPD4_1717 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPD4_1717 IPR036005 Creatinase/aminopeptidase-like YPD4_1718 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_1718 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YPD4_1718 IPR019734 Tetratricopeptide repeat YPD4_1718 IPR013026 Tetratricopeptide repeat-containing domain YPD4_1719 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YPD4_1719 IPR002509 NodB homology domain YPD4_1719 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal YPD4_1719 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_1720 IPR001173 Glycosyltransferase 2-like YPD4_1720 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA YPD4_1720 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_1721 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YPD4_1723 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1723 IPR003714 PhoH-like protein YPD4_1724 IPR004713 Calcium/proton exchanger YPD4_1724 IPR004837 Sodium/calcium exchanger membrane region YPD4_1725 IPR003660 HAMP domain YPD4_1725 IPR042295 NarX-like, N-terminal domain superfamily YPD4_1725 IPR005467 Histidine kinase domain YPD4_1725 IPR029095 NarX-like, N-terminal YPD4_1725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_1725 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing YPD4_1725 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_1725 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPD4_1726 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1726 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1726 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1726 IPR004839 Aminotransferase, class I/classII YPD4_1726 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1726 IPR000524 Transcription regulator HTH, GntR YPD4_1726 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1727 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1727 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1727 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1727 IPR026330 Succinylornithine transaminase YPD4_1727 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPD4_1727 IPR004636 Acetylornithine/Succinylornithine transaminase family YPD4_1727 IPR005814 Aminotransferase class-III YPD4_1728 IPR017650 Arginine N-succinyltransferase YPD4_1728 IPR016181 Acyl-CoA N-acyltransferase YPD4_1728 IPR007041 Arginine N-succinyltransferase AstA/AruG YPD4_1729 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_1729 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1729 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPD4_1729 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_1729 IPR017649 Succinylglutamate-semialdehyde dehydrogenase YPD4_1729 IPR015590 Aldehyde dehydrogenase domain YPD4_1729 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_1730 IPR007079 Succinylarginine dihydrolase YPD4_1730 IPR037031 Succinylarginine dihydrolase superfamily YPD4_1731 IPR016681 Succinylglutamate desuccinylase YPD4_1731 IPR007036 Succinylglutamate desuccinylase/aspartoacylase YPD4_1732 IPR001702 Porin, Gram-negative type YPD4_1732 IPR013793 Porin, Gram-negative type, conserved site YPD4_1732 IPR033900 Porin domain, Gram-negative type YPD4_1732 IPR023614 Porin domain superfamily YPD4_1732 IPR001897 Porin, gammaproteobacterial YPD4_1733 IPR036397 Ribonuclease H superfamily YPD4_1733 IPR017894 HTH domain, IS21 transposase-type YPD4_1733 IPR006120 Resolvase, HTH domain YPD4_1733 IPR001584 Integrase, catalytic core YPD4_1733 IPR012337 Ribonuclease H-like superfamily YPD4_1734 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1734 IPR003593 AAA+ ATPase domain YPD4_1734 IPR001270 ClpA/B family YPD4_1734 IPR002611 IstB-like ATP-binding protein YPD4_1734 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1736 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPD4_1736 IPR032466 Metal-dependent hydrolase YPD4_1736 IPR006680 Amidohydrolase-related YPD4_1736 IPR005920 Imidazolonepropionase YPD4_1737 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPD4_1737 IPR011663 UbiC transcription regulator-associated YPD4_1737 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1737 IPR010248 Histidine utilization repressor YPD4_1737 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1737 IPR000524 Transcription regulator HTH, GntR YPD4_1738 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPD4_1738 IPR023512 Deaminase MtaD/DadD YPD4_1738 IPR006680 Amidohydrolase-related YPD4_1738 IPR032466 Metal-dependent hydrolase YPD4_1739 IPR023482 Uncharacterised protein family Ves YPD4_1739 IPR010282 Uncharacterised protein family HutD/Ves YPD4_1739 IPR011051 RmlC-like cupin domain superfamily YPD4_1739 IPR014710 RmlC-like jelly roll fold YPD4_1741 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPD4_1741 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPD4_1741 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPD4_1741 IPR016039 Thiolase-like YPD4_1742 IPR016039 Thiolase-like YPD4_1742 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPD4_1742 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPD4_1742 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPD4_1743 IPR001509 NAD-dependent epimerase/dehydratase YPD4_1743 IPR036291 NAD(P)-binding domain superfamily YPD4_1752 IPR001207 Transposase, mutator type YPD4_1756 IPR016584 Methyltransferase VrtF-like YPD4_1756 IPR013217 Methyltransferase type 12 YPD4_1756 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1757 IPR036291 NAD(P)-binding domain superfamily YPD4_1757 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1757 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1764 IPR006290 Heavy metal sensor kinase YPD4_1764 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_1764 IPR003660 HAMP domain YPD4_1764 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_1764 IPR005467 Histidine kinase domain YPD4_1764 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_1764 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_1764 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_1765 IPR001789 Signal transduction response regulator, receiver domain YPD4_1765 IPR039420 Transcriptional regulatory protein WalR-like YPD4_1765 IPR011006 CheY-like superfamily YPD4_1765 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1765 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_1765 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YPD4_1766 IPR029058 Alpha/Beta hydrolase fold YPD4_1766 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain YPD4_1774 IPR023192 TGS-like domain superfamily YPD4_1774 IPR004095 TGS YPD4_1774 IPR012676 TGS-like YPD4_1774 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPD4_1774 IPR012675 Beta-grasp domain superfamily YPD4_1774 IPR013029 YchF, C-terminal domain YPD4_1774 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YPD4_1774 IPR041706 YchF, N-terminal YPD4_1774 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1774 IPR006073 GTP binding domain YPD4_1775 IPR001328 Peptidyl-tRNA hydrolase YPD4_1775 IPR018171 Peptidyl-tRNA hydrolase, conserved site YPD4_1775 IPR036416 Peptidyl-tRNA hydrolase superfamily YPD4_1776 IPR029057 Phosphoribosyltransferase-like YPD4_1776 IPR005946 Ribose-phosphate pyrophosphokinase YPD4_1776 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type YPD4_1776 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YPD4_1776 IPR000836 Phosphoribosyltransferase domain YPD4_1776 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YPD4_1777 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YPD4_1777 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_1777 IPR013750 GHMP kinase, C-terminal domain YPD4_1777 IPR036554 GHMP kinase, C-terminal domain superfamily YPD4_1777 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_1777 IPR006204 GHMP kinase N-terminal domain YPD4_1778 IPR004565 Outer membrane lipoprotein LolB YPD4_1778 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPD4_1779 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily YPD4_1779 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YPD4_1779 IPR036291 NAD(P)-binding domain superfamily YPD4_1779 IPR018214 Glutamyl-tRNA reductase, conserved site YPD4_1779 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YPD4_1779 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPD4_1779 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily YPD4_1779 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YPD4_1780 IPR004373 Peptide chain release factor 1 YPD4_1780 IPR005139 Peptide chain release factor YPD4_1780 IPR000352 Peptide chain release factor class I YPD4_1781 IPR004556 Methyltransferase HemK-like YPD4_1781 IPR025714 Methyltransferase domain YPD4_1781 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YPD4_1781 IPR040758 Release factor glutamine methyltransferase, N-terminal domain YPD4_1781 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1781 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_1782 IPR007360 Invasion gene expression up-regulator, SirB YPD4_1783 IPR032698 Protein SirB1, N-terminal YPD4_1784 IPR006218 DAHP synthetase I/KDSA YPD4_1784 IPR006269 3-deoxy-8-phosphooctulonate synthase YPD4_1784 IPR013785 Aldolase-type TIM barrel YPD4_1785 IPR036513 STAS domain superfamily YPD4_1785 IPR001902 SLC26A/SulP transporter YPD4_1785 IPR011547 SLC26A/SulP transporter domain YPD4_1785 IPR002645 STAS domain YPD4_1785 IPR018045 Sulphate anion transporter, conserved site YPD4_1786 IPR018045 Sulphate anion transporter, conserved site YPD4_1786 IPR002645 STAS domain YPD4_1786 IPR036513 STAS domain superfamily YPD4_1786 IPR011547 SLC26A/SulP transporter domain YPD4_1786 IPR001902 SLC26A/SulP transporter YPD4_1787 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPD4_1787 IPR030395 Glycerophosphodiester phosphodiesterase domain YPD4_1789 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1789 IPR035906 MetI-like superfamily YPD4_1790 IPR035906 MetI-like superfamily YPD4_1790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1791 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_1791 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1791 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPD4_1791 IPR013611 Transport-associated OB, type 2 YPD4_1791 IPR003593 AAA+ ATPase domain YPD4_1791 IPR017871 ABC transporter, conserved site YPD4_1791 IPR003439 ABC transporter-like YPD4_1791 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPD4_1793 IPR003593 AAA+ ATPase domain YPD4_1793 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_1793 IPR013611 Transport-associated OB, type 2 YPD4_1793 IPR017871 ABC transporter, conserved site YPD4_1793 IPR003439 ABC transporter-like YPD4_1793 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPD4_1793 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1793 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPD4_1794 IPR030395 Glycerophosphodiester phosphodiesterase domain YPD4_1794 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPD4_1795 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1795 IPR000600 ROK family YPD4_1795 IPR022687 DTXR-type HTH domain YPD4_1795 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1796 IPR023710 Probable phosphatase YcdX YPD4_1796 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPD4_1796 IPR004013 PHP domain YPD4_1796 IPR016195 Polymerase/histidinol phosphatase-like YPD4_1797 IPR020945 DMSO/Nitrate reductase chaperone YPD4_1797 IPR036411 TorD-like superfamily YPD4_1797 IPR026269 Tat proofreading chaperone DmsD-type YPD4_1798 IPR010835 Protein of unknown function DUF1439 YPD4_1799 IPR036259 MFS transporter superfamily YPD4_1799 IPR020846 Major facilitator superfamily domain YPD4_1799 IPR022855 Multidrug resistance protein MdtH YPD4_1799 IPR011701 Major facilitator superfamily YPD4_1800 IPR016181 Acyl-CoA N-acyltransferase YPD4_1800 IPR000182 GNAT domain YPD4_1801 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1801 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1801 IPR007432 Protein of unknown function DUF480 YPD4_1802 IPR004268 Peptidoglycan biosynthesis protein MurJ YPD4_1804 IPR013686 Polypeptide-transport-associated, ShlB-type YPD4_1804 IPR035251 ShlB, POTRA domain YPD4_1804 IPR034746 POTRA domain YPD4_1804 IPR005565 Haemolysin activator HlyB, C-terminal YPD4_1804 IPR027282 Two partner secretion pathway transporter YPD4_1805 IPR011050 Pectin lyase fold/virulence factor YPD4_1805 IPR025157 Hemagglutinin repeat YPD4_1805 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_1805 IPR012334 Pectin lyase fold YPD4_1806 IPR005148 Arginyl tRNA synthetase N-terminal domain YPD4_1806 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_1806 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily YPD4_1806 IPR035684 Arginyl-tRNA synthetase, catalytic core domain YPD4_1806 IPR008909 DALR anticodon binding YPD4_1806 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_1806 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPD4_1806 IPR001278 Arginine-tRNA ligase YPD4_1807 IPR010393 Protein of unknown function DUF991 YPD4_1807 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPD4_1808 IPR036822 Copper homeostasis (CutC) domain superfamily YPD4_1808 IPR023648 Copper homeostasis CutC domain YPD4_1808 IPR005627 Copper homeostasis protein CutC YPD4_1809 IPR010017 tRNA U34 carboxymethyltransferase YPD4_1809 IPR027555 tRNA (mo5U34)-methyltransferase-like YPD4_1809 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1810 IPR041698 Methyltransferase domain 25 YPD4_1810 IPR005271 Carboxy-S-adenosyl-L-methionine synthase YPD4_1810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_1811 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily YPD4_1811 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPD4_1812 IPR002763 Protein of unknown function DUF72 YPD4_1812 IPR036520 UPF0759 superfamily YPD4_1813 IPR004115 GAD-like domain superfamily YPD4_1813 IPR029351 GAD domain YPD4_1813 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPD4_1813 IPR004524 Aspartate-tRNA ligase, type 1 YPD4_1813 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_1813 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPD4_1813 IPR012340 Nucleic acid-binding, OB-fold YPD4_1813 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPD4_1814 IPR020084 NUDIX hydrolase, conserved site YPD4_1814 IPR003564 Dihydroneopterin triphosphate diphosphatase YPD4_1814 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_1814 IPR000086 NUDIX hydrolase domain YPD4_1815 IPR029072 YebC-like YPD4_1815 IPR002876 Transcriptional regulator TACO1-like YPD4_1815 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPD4_1815 IPR017856 Integrase-like, N-terminal YPD4_1816 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YPD4_1816 IPR002176 Crossover junction endodeoxyribonuclease RuvC YPD4_1816 IPR036397 Ribonuclease H superfamily YPD4_1816 IPR012337 Ribonuclease H-like superfamily YPD4_1817 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPD4_1817 IPR036267 RuvA, C-terminal domain superfamily YPD4_1817 IPR010994 RuvA domain 2-like YPD4_1817 IPR000085 Bacterial DNA recombination protein RuvA YPD4_1817 IPR012340 Nucleic acid-binding, OB-fold YPD4_1817 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YPD4_1817 IPR011114 Holliday junction DNA helicase RuvA, C-terminal YPD4_1818 IPR004605 DNA helicase, Holliday junction RuvB-type YPD4_1818 IPR008824 RuvB-like P-loop domain YPD4_1818 IPR003593 AAA+ ATPase domain YPD4_1818 IPR041445 RuvB, AAA lid domain YPD4_1818 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1818 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1818 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1818 IPR008823 RuvB C-terminal winged helix domain YPD4_1819 IPR001626 ABC transporter, TroCD-like YPD4_1819 IPR037294 ABC transporter, BtuC-like YPD4_1820 IPR017882 Zinc import ATP-binding protein ZnuC YPD4_1820 IPR003593 AAA+ ATPase domain YPD4_1820 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1820 IPR003439 ABC transporter-like YPD4_1821 IPR035520 High-affinity zinc uptake system protein ZnuA YPD4_1821 IPR006127 Periplasmic solute binding protein, ZnuA-like YPD4_1822 IPR016047 Peptidase M23 YPD4_1822 IPR018392 LysM domain YPD4_1822 IPR011055 Duplicated hybrid motif YPD4_1822 IPR013731 Opacity-associated protein A, N-terminal YPD4_1823 IPR011921 Lipid A biosynthesis myristoyltransferase YPD4_1823 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPD4_1824 IPR001697 Pyruvate kinase YPD4_1824 IPR015806 Pyruvate kinase, insert domain superfamily YPD4_1824 IPR040442 Pyruvate kinase-like domain superfamily YPD4_1824 IPR011037 Pyruvate kinase-like, insert domain superfamily YPD4_1824 IPR018209 Pyruvate kinase, active site YPD4_1824 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPD4_1824 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_1824 IPR015795 Pyruvate kinase, C-terminal YPD4_1824 IPR015793 Pyruvate kinase, barrel YPD4_1825 IPR000281 Helix-turn-helix protein RpiR YPD4_1825 IPR035472 RpiR-like, SIS domain YPD4_1825 IPR001347 Sugar isomerase (SIS) YPD4_1825 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1825 IPR009057 Homeobox-like domain superfamily YPD4_1826 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YPD4_1826 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YPD4_1826 IPR001282 Glucose-6-phosphate dehydrogenase YPD4_1826 IPR019796 Glucose-6-phosphate dehydrogenase, active site YPD4_1826 IPR036291 NAD(P)-binding domain superfamily YPD4_1827 IPR031338 KDPG/KHG aldolase, active site 2 YPD4_1827 IPR031337 KDPG/KHG aldolase, active site 1 YPD4_1827 IPR013785 Aldolase-type TIM barrel YPD4_1827 IPR000887 KDPG/KHG aldolase YPD4_1828 IPR023740 Spermidine export protein MdtJ YPD4_1828 IPR000390 Small multidrug resistance protein family YPD4_1829 IPR023737 Spermidine export protein MdtI YPD4_1829 IPR000390 Small multidrug resistance protein family YPD4_1830 IPR006175 YjgF/YER057c/UK114 family YPD4_1830 IPR019897 RidA, conserved site YPD4_1830 IPR035959 RutC-like superfamily YPD4_1830 IPR035709 RutC family, YoaB-like YPD4_1831 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_1831 IPR006935 Helicase/UvrB, N-terminal YPD4_1831 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1831 IPR006555 ATP-dependent helicase, C-terminal YPD4_1831 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPD4_1832 IPR000905 Gcp-like domain YPD4_1832 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB YPD4_1833 IPR004658 Outer membrane lipoprotein Slp YPD4_1834 IPR042099 AMP-dependent synthetase-like superfamily YPD4_1834 IPR025110 AMP-binding enzyme, C-terminal domain YPD4_1834 IPR020845 AMP-binding, conserved site YPD4_1834 IPR000873 AMP-dependent synthetase/ligase YPD4_1835 IPR006292 Ribonuclease D YPD4_1835 IPR002562 3'-5' exonuclease domain YPD4_1835 IPR010997 HRDC-like superfamily YPD4_1835 IPR012337 Ribonuclease H-like superfamily YPD4_1835 IPR002121 HRDC domain YPD4_1835 IPR036397 Ribonuclease H superfamily YPD4_1836 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1836 IPR010223 ATP binding protein MinD, bacterial-type YPD4_1836 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPD4_1836 IPR025501 ATP binding protein MinD YPD4_1837 IPR013033 Septum formation inhibitor MinC YPD4_1837 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily YPD4_1837 IPR005526 Septum formation inhibitor MinC, C-terminal YPD4_1837 IPR007874 Septum formation inhibitor MinC, N-terminal YPD4_1837 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YPD4_1837 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily YPD4_1838 IPR023346 Lysozyme-like domain superfamily YPD4_1838 IPR011757 Lytic transglycosylase MltB YPD4_1838 IPR031304 Transglycosylase SLT domain 2 YPD4_1839 IPR011234 Fumarylacetoacetase-like, C-terminal YPD4_1839 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPD4_1840 IPR008228 Uncharacterised conserved protein UCP006173 YPD4_1840 IPR005358 Putative zinc- or iron-chelating domain containing protein YPD4_1841 IPR022000 Min27-like integrase, DNA-binding domain YPD4_1841 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_1841 IPR013762 Integrase-like, catalytic domain superfamily YPD4_1841 IPR002104 Integrase, catalytic domain YPD4_1841 IPR010998 Integrase/recombinase, N-terminal YPD4_1842 IPR017894 HTH domain, IS21 transposase-type YPD4_1842 IPR001584 Integrase, catalytic core YPD4_1842 IPR006120 Resolvase, HTH domain YPD4_1842 IPR012337 Ribonuclease H-like superfamily YPD4_1842 IPR036397 Ribonuclease H superfamily YPD4_1843 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1843 IPR001270 ClpA/B family YPD4_1843 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1843 IPR003593 AAA+ ATPase domain YPD4_1843 IPR002611 IstB-like ATP-binding protein YPD4_1845 IPR036619 NinB superfamily YPD4_1845 IPR008711 Recombinase NinB YPD4_1854 IPR001207 Transposase, mutator type YPD4_1877 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPD4_1878 IPR001207 Transposase, mutator type YPD4_1880 IPR000192 Aminotransferase class V domain YPD4_1880 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_1880 IPR010240 Cysteine desulfurase IscS YPD4_1880 IPR016454 Cysteine desulfurase YPD4_1880 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_1880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_1880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_1883 IPR023380 DsbB-like superfamily YPD4_1883 IPR022920 Disulphide bond formation protein DsbB YPD4_1883 IPR003752 Disulphide bond formation protein DsbB/BdbC YPD4_1884 IPR004671 Na+/H+ antiporter NhaB YPD4_1885 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1885 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1885 IPR014178 Fatty acid response transcription factor FadR YPD4_1885 IPR008920 Transcription regulator FadR/GntR, C-terminal YPD4_1885 IPR028374 FadR, C-terminal domain YPD4_1885 IPR000524 Transcription regulator HTH, GntR YPD4_1886 IPR007390 Sporulation stage V, protein R YPD4_1887 IPR023080 D-amino acid dehydrogenase DadA YPD4_1887 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_1887 IPR006076 FAD dependent oxidoreductase YPD4_1888 IPR023697 Multidrug resistance protein MdtL YPD4_1888 IPR011701 Major facilitator superfamily YPD4_1888 IPR020846 Major facilitator superfamily domain YPD4_1888 IPR036259 MFS transporter superfamily YPD4_1889 IPR008778 Pirin, C-terminal domain YPD4_1889 IPR011051 RmlC-like cupin domain superfamily YPD4_1889 IPR014710 RmlC-like jelly roll fold YPD4_1889 IPR012093 Pirin YPD4_1889 IPR003829 Pirin, N-terminal domain YPD4_1890 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1890 IPR005119 LysR, substrate-binding YPD4_1890 IPR000847 Transcription regulator HTH, LysR YPD4_1890 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1892 IPR006698 Uncharacterised protein family UPF0229 YPD4_1893 IPR013153 PrkA AAA domain YPD4_1893 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1893 IPR016230 Serine-protein kinase, PrkA YPD4_1893 IPR010650 PrkA C-terminal domain YPD4_1894 IPR010583 MltA-interacting MipA YPD4_1895 IPR025532 Glucose-6-phosphate 1-epimerase YPD4_1895 IPR011013 Galactose mutarotase-like domain superfamily YPD4_1895 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPD4_1895 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPD4_1896 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPD4_1896 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPD4_1896 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YPD4_1896 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPD4_1896 IPR036291 NAD(P)-binding domain superfamily YPD4_1896 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPD4_1897 IPR011057 Mss4-like superfamily YPD4_1897 IPR002579 Peptide methionine sulphoxide reductase MrsB YPD4_1897 IPR028427 Peptide methionine sulfoxide reductase YPD4_1899 IPR000868 Isochorismatase-like YPD4_1899 IPR036380 Isochorismatase-like superfamily YPD4_1900 IPR027475 Asparaginase/glutaminase, active site 2 YPD4_1900 IPR037152 L-asparaginase, N-terminal domain superfamily YPD4_1900 IPR040919 Asparaginase/glutaminase, C-terminal YPD4_1900 IPR006033 Type I L-asparaginase family YPD4_1900 IPR041725 Type I (cytosolic) L-asparaginase YPD4_1900 IPR027474 L-asparaginase, N-terminal YPD4_1900 IPR036152 Asparaginase/glutaminase-like superfamily YPD4_1900 IPR006034 Asparaginase/glutaminase-like YPD4_1900 IPR020827 Asparaginase/glutaminase, active site 1 YPD4_1900 IPR027473 L-asparaginase, C-terminal YPD4_1901 IPR004634 Peptidase S49, protease IV YPD4_1901 IPR029045 ClpP/crotonase-like domain superfamily YPD4_1901 IPR002142 Peptidase S49 YPD4_1901 IPR004635 Peptidase S49, SppA YPD4_1901 IPR033854 Signal peptide peptidase A YPD4_1902 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YPD4_1902 IPR000415 Nitroreductase-like YPD4_1902 IPR029479 Nitroreductase YPD4_1903 IPR023061 Selenophosphate synthetase, class I YPD4_1903 IPR016188 PurM-like, N-terminal domain YPD4_1903 IPR004536 Selenophosphate synthetase YPD4_1903 IPR010918 PurM-like, C-terminal domain YPD4_1903 IPR036676 PurM-like, C-terminal domain superfamily YPD4_1903 IPR036921 PurM-like, N-terminal domain superfamily YPD4_1904 IPR000380 DNA topoisomerase, type IA YPD4_1904 IPR003601 DNA topoisomerase, type IA, domain 2 YPD4_1904 IPR023406 DNA topoisomerase, type IA, active site YPD4_1904 IPR013497 DNA topoisomerase, type IA, central YPD4_1904 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPD4_1904 IPR005738 DNA topoisomerase III YPD4_1904 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPD4_1904 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPD4_1904 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPD4_1904 IPR023405 DNA topoisomerase, type IA, core domain YPD4_1904 IPR006171 TOPRIM domain YPD4_1904 IPR034144 DNA topoisomerase 3-like, TOPRIM domain YPD4_1905 IPR020084 NUDIX hydrolase, conserved site YPD4_1905 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_1905 IPR020476 NUDIX hydrolase YPD4_1905 IPR000086 NUDIX hydrolase domain YPD4_1906 IPR004808 AP endonuclease 1 YPD4_1906 IPR020847 AP endonuclease 1, binding site YPD4_1906 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPD4_1906 IPR005135 Endonuclease/exonuclease/phosphatase YPD4_1906 IPR037493 Exodeoxyribonuclease III-like YPD4_1906 IPR020848 AP endonuclease 1, conserved site YPD4_1907 IPR005119 LysR, substrate-binding YPD4_1907 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1907 IPR000847 Transcription regulator HTH, LysR YPD4_1907 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1908 IPR001207 Transposase, mutator type YPD4_1909 IPR004810 Formyltetrahydrofolate deformylase YPD4_1909 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain YPD4_1909 IPR036477 Formyl transferase, N-terminal domain superfamily YPD4_1909 IPR002376 Formyl transferase, N-terminal YPD4_1909 IPR002912 ACT domain YPD4_1910 IPR023006 Uncharacterised protein family UPF0225 YPD4_1910 IPR004027 SEC-C motif YPD4_1910 IPR032710 NTF2-like domain superfamily YPD4_1911 IPR028616 Regulator of RpoS YPD4_1911 IPR001789 Signal transduction response regulator, receiver domain YPD4_1911 IPR039420 Transcriptional regulatory protein WalR-like YPD4_1911 IPR036457 PPM-type phosphatase domain superfamily YPD4_1911 IPR011006 CheY-like superfamily YPD4_1912 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YPD4_1912 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_1912 IPR036291 NAD(P)-binding domain superfamily YPD4_1912 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPD4_1912 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPD4_1912 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPD4_1912 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPD4_1912 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPD4_1913 IPR001801 Histone-like protein H-NS YPD4_1913 IPR027454 Histone-like protein H-NS, N-terminal YPD4_1913 IPR027444 Histone-like protein H-NS, C-terminal domain YPD4_1913 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily YPD4_1914 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1914 IPR001267 Thymidine kinase YPD4_1914 IPR020633 Thymidine kinase, conserved site YPD4_1915 IPR001270 ClpA/B family YPD4_1915 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_1915 IPR003593 AAA+ ATPase domain YPD4_1915 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1915 IPR002611 IstB-like ATP-binding protein YPD4_1916 IPR036397 Ribonuclease H superfamily YPD4_1916 IPR001584 Integrase, catalytic core YPD4_1916 IPR006120 Resolvase, HTH domain YPD4_1916 IPR017894 HTH domain, IS21 transposase-type YPD4_1916 IPR012337 Ribonuclease H-like superfamily YPD4_1917 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain YPD4_1917 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPD4_1917 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPD4_1917 IPR039697 Iron-type alcohol dehydrogenase-like YPD4_1917 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1917 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_1917 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_1917 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPD4_1917 IPR015590 Aldehyde dehydrogenase domain YPD4_1918 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPD4_1918 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPD4_1918 IPR039697 Iron-type alcohol dehydrogenase-like YPD4_1918 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_1918 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_1918 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain YPD4_1918 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_1918 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPD4_1918 IPR015590 Aldehyde dehydrogenase domain YPD4_1919 IPR002771 Multiple antibiotic resistance (MarC)-related YPD4_1920 IPR000914 Solute-binding protein family 5 domain YPD4_1920 IPR030678 Peptide/nickel binding protein, MppA-type YPD4_1920 IPR039424 Solute-binding protein family 5 YPD4_1920 IPR023765 Solute-binding protein family 5, conserved site YPD4_1921 IPR035906 MetI-like superfamily YPD4_1921 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1922 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_1922 IPR035906 MetI-like superfamily YPD4_1922 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPD4_1923 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1923 IPR017871 ABC transporter, conserved site YPD4_1923 IPR003439 ABC transporter-like YPD4_1923 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_1923 IPR003593 AAA+ ATPase domain YPD4_1924 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_1924 IPR003593 AAA+ ATPase domain YPD4_1924 IPR003439 ABC transporter-like YPD4_1924 IPR017871 ABC transporter, conserved site YPD4_1924 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1925 IPR007376 dsDNA mimic, putative YPD4_1925 IPR036763 Putative dsDNA mimic superfamily YPD4_1926 IPR022924 Cardiolipin synthase YPD4_1926 IPR027379 Cardiolipin synthase N-terminal YPD4_1926 IPR030840 Cardiolipin synthase A YPD4_1926 IPR025202 Phospholipase D-like domain YPD4_1926 IPR001736 Phospholipase D/Transphosphatidylase YPD4_1927 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_1927 IPR027385 Outer membrane protein beta-barrel domain YPD4_1927 IPR000758 Virulence-related outer membrane protein YPD4_1928 IPR006260 TonB/TolA, C-terminal YPD4_1928 IPR003538 Gram-negative bacterial TonB protein YPD4_1928 IPR037682 TonB, C-terminal YPD4_1929 IPR001207 Transposase, mutator type YPD4_1930 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase YPD4_1930 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain YPD4_1930 IPR006683 Thioesterase domain YPD4_1930 IPR029069 HotDog domain superfamily YPD4_1931 IPR006008 Intracellular septation protein A YPD4_1934 IPR009627 Uncharacterised protein family UPF0259 YPD4_1935 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_1935 IPR005618 Outer membrane protein, OmpW YPD4_1937 IPR011060 Ribulose-phosphate binding barrel YPD4_1937 IPR018204 Tryptophan synthase, alpha chain, active site YPD4_1937 IPR002028 Tryptophan synthase, alpha chain YPD4_1937 IPR013785 Aldolase-type TIM barrel YPD4_1938 IPR006654 Tryptophan synthase, beta chain YPD4_1938 IPR006653 Tryptophan synthase, beta chain, conserved site YPD4_1938 IPR023026 Tryptophan synthase beta chain/beta chain-like YPD4_1938 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_1938 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_1939 IPR013785 Aldolase-type TIM barrel YPD4_1939 IPR013798 Indole-3-glycerol phosphate synthase YPD4_1939 IPR011060 Ribulose-phosphate binding barrel YPD4_1939 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) YPD4_1939 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YPD4_1940 IPR000312 Glycosyl transferase, family 3 YPD4_1940 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPD4_1940 IPR017459 Glycosyl transferase family 3, N-terminal domain YPD4_1940 IPR005940 Anthranilate phosphoribosyl transferase YPD4_1940 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPD4_1941 IPR017926 Glutamine amidotransferase YPD4_1941 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPD4_1941 IPR029062 Class I glutamine amidotransferase-like YPD4_1942 IPR015890 Chorismate-utilising enzyme, C-terminal YPD4_1942 IPR019999 Anthranilate synthase component I-like YPD4_1942 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YPD4_1942 IPR005801 ADC synthase YPD4_1942 IPR006805 Anthranilate synthase component I, N-terminal YPD4_1943 IPR016195 Polymerase/histidinol phosphatase-like YPD4_1943 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPD4_1943 IPR004013 PHP domain YPD4_1944 IPR006070 YrdC-like domain YPD4_1944 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPD4_1945 IPR002942 RNA-binding S4 domain YPD4_1945 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_1945 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPD4_1945 IPR036986 RNA-binding S4 domain superfamily YPD4_1945 IPR006145 Pseudouridine synthase, RsuA/RluA YPD4_1945 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPD4_1946 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YPD4_1946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1947 IPR036291 NAD(P)-binding domain superfamily YPD4_1947 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_1947 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_1948 IPR002142 Peptidase S49 YPD4_1948 IPR029045 ClpP/crotonase-like domain superfamily YPD4_1948 IPR013703 Peptidase S49, N-terminal proteobacteria YPD4_1949 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPD4_1949 IPR028612 DNA topoisomerase I, type IA YPD4_1949 IPR006171 TOPRIM domain YPD4_1949 IPR034149 DNA topoisomerase 1, TOPRIM domain YPD4_1949 IPR000380 DNA topoisomerase, type IA YPD4_1949 IPR023406 DNA topoisomerase, type IA, active site YPD4_1949 IPR013497 DNA topoisomerase, type IA, central YPD4_1949 IPR003601 DNA topoisomerase, type IA, domain 2 YPD4_1949 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPD4_1949 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YPD4_1949 IPR005733 DNA topoisomerase I, bacterial-type YPD4_1949 IPR013498 DNA topoisomerase, type IA, zn finger YPD4_1949 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPD4_1949 IPR023405 DNA topoisomerase, type IA, core domain YPD4_1949 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPD4_1950 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1950 IPR005119 LysR, substrate-binding YPD4_1950 IPR000847 Transcription regulator HTH, LysR YPD4_1950 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1952 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPD4_1952 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPD4_1952 IPR036008 Aconitase, iron-sulfur domain YPD4_1952 IPR006249 Aconitase/Iron-responsive element-binding protein 2 YPD4_1952 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPD4_1952 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPD4_1952 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPD4_1953 IPR000926 GTP cyclohydrolase II, RibA YPD4_1953 IPR036144 RibA-like superfamily YPD4_1953 IPR032677 GTP cyclohydrolase II YPD4_1954 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPD4_1954 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPD4_1955 IPR032906 Lipopolysaccharide assembly protein A YPD4_1955 IPR010445 Lipopolysaccharide assembly protein A domain YPD4_1956 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_1956 IPR041166 LapB, rubredoxin metal binding domain YPD4_1956 IPR030865 Lipopolysaccharide assembly protein B YPD4_1956 IPR019734 Tetratricopeptide repeat YPD4_1956 IPR013026 Tetratricopeptide repeat-containing domain YPD4_1957 IPR011060 Ribulose-phosphate binding barrel YPD4_1957 IPR001754 Orotidine 5'-phosphate decarboxylase domain YPD4_1957 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YPD4_1957 IPR014732 Orotidine 5'-phosphate decarboxylase YPD4_1957 IPR013785 Aldolase-type TIM barrel YPD4_1958 IPR001950 SUI1 domain YPD4_1958 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YPD4_1958 IPR036877 SUI1 domain superfamily YPD4_1959 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPD4_1959 IPR004661 L-ribulose-5-phosphate 4-epimerase YPD4_1959 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPD4_1959 IPR001303 Class II aldolase/adducin N-terminal YPD4_1960 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial YPD4_1960 IPR023001 Fructose-6-phosphate aldolase YPD4_1960 IPR013785 Aldolase-type TIM barrel YPD4_1960 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase YPD4_1960 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPD4_1960 IPR018225 Transaldolase, active site YPD4_1961 IPR007423 Selenoprotein, putative YPD4_1962 IPR025299 CstA, C-terminal domain YPD4_1962 IPR003706 CstA, N-terminal domain YPD4_1963 IPR011804 Ribonuclease II YPD4_1963 IPR013223 Ribonuclease B, N-terminal OB domain YPD4_1963 IPR022966 Ribonuclease II/R, conserved site YPD4_1963 IPR004476 Ribonuclease II/ribonuclease R YPD4_1963 IPR003029 S1 domain YPD4_1963 IPR012340 Nucleic acid-binding, OB-fold YPD4_1963 IPR040476 RNase II/RNase R, cold shock domain YPD4_1963 IPR011129 Cold shock domain YPD4_1963 IPR001900 Ribonuclease II/R YPD4_1964 IPR011701 Major facilitator superfamily YPD4_1964 IPR020846 Major facilitator superfamily domain YPD4_1964 IPR036259 MFS transporter superfamily YPD4_1965 IPR036291 NAD(P)-binding domain superfamily YPD4_1965 IPR001509 NAD-dependent epimerase/dehydratase YPD4_1966 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPD4_1966 IPR011257 DNA glycosylase YPD4_1966 IPR004036 Endonuclease III-like, conserved site-2 YPD4_1966 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPD4_1966 IPR004035 Endonuclease III, iron-sulphur binding site YPD4_1966 IPR005759 Endonuclease III YPD4_1966 IPR000445 Helix-hairpin-helix motif YPD4_1966 IPR003265 HhH-GPD domain YPD4_1967 IPR003667 NqrDE/RnfAE YPD4_1967 IPR010968 Ion-translocating oxidoreductase complex subunit E YPD4_1968 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG YPD4_1968 IPR007329 FMN-binding YPD4_1969 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPD4_1969 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D YPD4_1970 IPR018062 HTH domain AraC-type, conserved site YPD4_1970 IPR020449 Transcription regulator HTH, AraC- type YPD4_1970 IPR018060 DNA binding HTH domain, AraC-type YPD4_1970 IPR009057 Homeobox-like domain superfamily YPD4_1970 IPR029442 GyrI-like small molecule binding domain YPD4_1970 IPR010499 Bacterial transcription activator, effector binding YPD4_1970 IPR011256 Regulatory factor, effector binding domain superfamily YPD4_1971 IPR009051 Alpha-helical ferredoxin YPD4_1971 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_1971 IPR026902 RnfC Barrel sandwich hybrid domain YPD4_1971 IPR019554 Soluble ligand binding domain YPD4_1971 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_1971 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPD4_1971 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPD4_1971 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC YPD4_1972 IPR007202 4Fe-4S domain YPD4_1972 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_1972 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_1972 IPR011005 Dihydropteroate synthase-like YPD4_1972 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB YPD4_1972 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria YPD4_1973 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA YPD4_1973 IPR003667 NqrDE/RnfAE YPD4_1974 IPR019690 Protein of unknown function DUF2569 YPD4_1975 IPR039395 Peptidase C39-like A YPD4_1975 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1975 IPR003593 AAA+ ATPase domain YPD4_1975 IPR039421 Type I protein exporter YPD4_1975 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1975 IPR005074 Peptidase C39, bacteriocin processing YPD4_1975 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1975 IPR003439 ABC transporter-like YPD4_1975 IPR017871 ABC transporter, conserved site YPD4_1975 IPR010132 ATPase, type I secretion system, HlyB YPD4_1976 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPD4_1976 IPR006144 Secretion protein HlyD, conserved site YPD4_1976 IPR010129 Type I secretion membrane fusion protein, HlyD family YPD4_1977 IPR006144 Secretion protein HlyD, conserved site YPD4_1977 IPR010129 Type I secretion membrane fusion protein, HlyD family YPD4_1978 IPR003593 AAA+ ATPase domain YPD4_1978 IPR011527 ABC transporter type 1, transmembrane domain YPD4_1978 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_1978 IPR010132 ATPase, type I secretion system, HlyB YPD4_1978 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1978 IPR039395 Peptidase C39-like A YPD4_1978 IPR003439 ABC transporter-like YPD4_1978 IPR017871 ABC transporter, conserved site YPD4_1978 IPR005074 Peptidase C39, bacteriocin processing YPD4_1978 IPR039421 Type I protein exporter YPD4_1979 IPR024664 L-arabinose isomerase, C-terminal YPD4_1979 IPR003762 L-arabinose isomerase YPD4_1979 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily YPD4_1979 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPD4_1979 IPR038583 L-arabinose isomerase, N-terminal domain superfamily YPD4_1980 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_1980 IPR005929 Ribulokinase YPD4_1981 IPR026266 L-arabinose-binding periplasmic protein YPD4_1981 IPR028082 Periplasmic binding protein-like I YPD4_1981 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPD4_1982 IPR017871 ABC transporter, conserved site YPD4_1982 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG YPD4_1982 IPR003593 AAA+ ATPase domain YPD4_1982 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1982 IPR003439 ABC transporter-like YPD4_1983 IPR001851 ABC transporter, permease YPD4_1984 IPR018062 HTH domain AraC-type, conserved site YPD4_1984 IPR018060 DNA binding HTH domain, AraC-type YPD4_1984 IPR037923 Transcription regulator HTH-like YPD4_1984 IPR009057 Homeobox-like domain superfamily YPD4_1984 IPR003313 AraC-type arabinose-binding/dimerisation domain YPD4_1984 IPR020449 Transcription regulator HTH, AraC- type YPD4_1985 IPR000683 Oxidoreductase, N-terminal YPD4_1985 IPR036291 NAD(P)-binding domain superfamily YPD4_1985 IPR004104 Oxidoreductase, C-terminal YPD4_1986 IPR016833 Putative sodium bile acid cotransporter YPD4_1986 IPR038770 Sodium/solute symporter superfamily YPD4_1988 IPR010352 Protein of unknown function DUF945 YPD4_1989 IPR016305 Mannose-6-phosphate isomerase YPD4_1989 IPR018050 Phosphomannose isomerase, type I, conserved site YPD4_1989 IPR014710 RmlC-like jelly roll fold YPD4_1989 IPR011051 RmlC-like cupin domain superfamily YPD4_1989 IPR001250 Mannose-6-phosphate isomerase, type I YPD4_1990 IPR005677 Fumarate hydratase, class II YPD4_1990 IPR008948 L-Aspartase-like YPD4_1990 IPR018951 Fumarase C, C-terminal YPD4_1990 IPR020557 Fumarate lyase, conserved site YPD4_1990 IPR000362 Fumarate lyase family YPD4_1990 IPR022761 Fumarate lyase, N-terminal YPD4_1990 IPR024083 Fumarase/histidase, N-terminal YPD4_1991 IPR008865 DNA replication terminus site-binding protein YPD4_1991 IPR036384 Replication terminator Tus superfamily YPD4_1991 IPR036381 Replication terminator Tus, domain 1 YPD4_1992 IPR011701 Major facilitator superfamily YPD4_1992 IPR020846 Major facilitator superfamily domain YPD4_1992 IPR036259 MFS transporter superfamily YPD4_1992 IPR005829 Sugar transporter, conserved site YPD4_1993 IPR000847 Transcription regulator HTH, LysR YPD4_1993 IPR005119 LysR, substrate-binding YPD4_1993 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1993 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1994 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_1994 IPR000600 ROK family YPD4_1994 IPR036390 Winged helix DNA-binding domain superfamily YPD4_1995 IPR004472 Dethiobiotin synthase BioD YPD4_1995 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_1996 IPR014743 Chloride channel, core YPD4_1996 IPR023790 Chloride channel, voltage-gated, ClcB YPD4_1996 IPR001807 Chloride channel, voltage gated YPD4_1997 IPR000843 LacI-type HTH domain YPD4_1997 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_1997 IPR028082 Periplasmic binding protein-like I YPD4_1999 IPR025997 Periplasmic binding protein YPD4_1999 IPR028082 Periplasmic binding protein-like I YPD4_2000 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_2000 IPR015168 SsuA/THI5-like YPD4_2000 IPR010067 Aliphatic sulfonates-binding protein YPD4_2001 IPR035906 MetI-like superfamily YPD4_2001 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2002 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily YPD4_2002 IPR011271 AMP nucleosidase YPD4_2002 IPR035994 Nucleoside phosphorylase superfamily YPD4_2002 IPR018953 AMP nucleoside phosphorylase, N-terminal YPD4_2002 IPR000845 Nucleoside phosphorylase domain YPD4_2007 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPD4_2007 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPD4_2007 IPR029061 Thiamin diphosphate-binding fold YPD4_2007 IPR012000 Thiamine pyrophosphate enzyme, central domain YPD4_2007 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPD4_2007 IPR000399 TPP-binding enzyme, conserved site YPD4_2007 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPD4_2007 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPD4_2008 IPR039557 AHAS, ACT domain YPD4_2008 IPR002912 ACT domain YPD4_2008 IPR004789 Acetolactate synthase, small subunit YPD4_2009 IPR006439 HAD hydrolase, subfamily IA YPD4_2009 IPR036412 HAD-like superfamily YPD4_2009 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_2009 IPR023214 HAD superfamily YPD4_2009 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPD4_2009 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YPD4_2012 IPR001952 Alkaline phosphatase YPD4_2012 IPR018299 Alkaline phosphatase, active site YPD4_2012 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_2013 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPD4_2013 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2013 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YPD4_2013 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPD4_2013 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPD4_2013 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPD4_2013 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPD4_2014 IPR000595 Cyclic nucleotide-binding domain YPD4_2014 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2014 IPR012318 Crp-type HTH domain YPD4_2014 IPR018490 Cyclic nucleotide-binding-like YPD4_2014 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2014 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPD4_2014 IPR014710 RmlC-like jelly roll fold YPD4_2015 IPR006016 UspA YPD4_2016 IPR034300 NADP transhydrogenase beta-like domain YPD4_2016 IPR012136 NADP transhydrogenase, beta subunit YPD4_2016 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPD4_2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPD4_2017 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YPD4_2017 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YPD4_2017 IPR026255 NAD(P) transhydrogenase, alpha subunit YPD4_2017 IPR036291 NAD(P)-binding domain superfamily YPD4_2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPD4_2017 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YPD4_2018 IPR025539 YdgH protein YPD4_2018 IPR036275 YdgH-like superfamily YPD4_2018 IPR025543 Dodecin-like YPD4_2018 IPR010854 Domain of unknown function DUF1471 YPD4_2019 IPR002293 Amino acid/polyamine transporter I YPD4_2019 IPR004754 Amino acid antiporter YPD4_2021 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2021 IPR011006 CheY-like superfamily YPD4_2021 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_2021 IPR039420 Transcriptional regulatory protein WalR-like YPD4_2021 IPR001789 Signal transduction response regulator, receiver domain YPD4_2021 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_2022 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2022 IPR005467 Histidine kinase domain YPD4_2022 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2022 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2022 IPR003660 HAMP domain YPD4_2022 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2022 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2023 IPR001333 Peptidase M32, carboxypeptidase Taq YPD4_2025 IPR022385 Rhs repeat-associated core YPD4_2025 IPR041508 Toxin complex C-like repeat YPD4_2025 IPR025968 YwqJ-like deaminase YPD4_2027 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YPD4_2027 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPD4_2027 IPR023480 Uncharacterised protein family UPF0312/YceI YPD4_2028 IPR016174 Di-haem cytochrome, transmembrane YPD4_2028 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPD4_2029 IPR018114 Serine proteases, trypsin family, histidine active site YPD4_2029 IPR033116 Serine proteases, trypsin family, serine active site YPD4_2029 IPR008256 Peptidase S1B YPD4_2029 IPR001254 Serine proteases, trypsin domain YPD4_2029 IPR009003 Peptidase S1, PA clan YPD4_2032 IPR001650 Helicase, C-terminal YPD4_2032 IPR003593 AAA+ ATPase domain YPD4_2032 IPR024590 RNA helicase HrpA, C-terminal YPD4_2032 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_2032 IPR011709 Domain of unknown function DUF1605 YPD4_2032 IPR007502 Helicase-associated domain YPD4_2032 IPR011545 DEAD/DEAH box helicase domain YPD4_2032 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2032 IPR010222 RNA helicase HrpA YPD4_2033 IPR023048 NADH-azoreductase, FMN-dependent YPD4_2033 IPR003680 Flavodoxin-like fold YPD4_2033 IPR029039 Flavoprotein-like superfamily YPD4_2034 IPR037171 NagB/RpiA transferase-like YPD4_2034 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2034 IPR012318 Crp-type HTH domain YPD4_2034 IPR007324 Sugar-binding domain, putative YPD4_2035 IPR013118 Mannitol dehydrogenase, C-terminal YPD4_2035 IPR013131 Mannitol dehydrogenase, N-terminal YPD4_2035 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_2035 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_2035 IPR036291 NAD(P)-binding domain superfamily YPD4_2035 IPR000669 Mannitol dehydrogenase YPD4_2036 IPR008309 Uncharacterised conserved protein UCP025560 YPD4_2037 IPR021730 Dicarboxylate transport YPD4_2038 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPD4_2038 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPD4_2038 IPR036291 NAD(P)-binding domain superfamily YPD4_2038 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPD4_2038 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPD4_2039 IPR038670 HslJ-like superfamily YPD4_2039 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPD4_2040 IPR005590 Protein of unknown function DUF333 YPD4_2041 IPR003416 MgtC/SapB/SrpB/YhiD family YPD4_2042 IPR000390 Small multidrug resistance protein family YPD4_2043 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YPD4_2043 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YPD4_2043 IPR011895 Pyruvate-flavodoxin oxidoreductase YPD4_2043 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YPD4_2043 IPR029061 Thiamin diphosphate-binding fold YPD4_2043 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPD4_2043 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPD4_2043 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YPD4_2043 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily YPD4_2043 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_2043 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_2043 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YPD4_2044 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type YPD4_2044 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase YPD4_2044 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPD4_2044 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2045 IPR013830 SGNH hydrolase-type esterase domain YPD4_2045 IPR036514 SGNH hydrolase superfamily YPD4_2045 IPR029058 Alpha/Beta hydrolase fold YPD4_2045 IPR013094 Alpha/beta hydrolase fold-3 YPD4_2047 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPD4_2047 IPR023714 Zinc transport protein ZntB YPD4_2048 IPR000914 Solute-binding protein family 5 domain YPD4_2048 IPR039424 Solute-binding protein family 5 YPD4_2048 IPR030678 Peptide/nickel binding protein, MppA-type YPD4_2048 IPR023765 Solute-binding protein family 5, conserved site YPD4_2049 IPR000834 Peptidase M14, carboxypeptidase A YPD4_2050 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPD4_2050 IPR034603 Dipeptide epimerase YPD4_2050 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPD4_2050 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPD4_2050 IPR029065 Enolase C-terminal domain-like YPD4_2050 IPR036849 Enolase-like, C-terminal domain superfamily YPD4_2050 IPR029017 Enolase-like, N-terminal YPD4_2051 IPR001584 Integrase, catalytic core YPD4_2051 IPR012337 Ribonuclease H-like superfamily YPD4_2051 IPR036397 Ribonuclease H superfamily YPD4_2051 IPR017894 HTH domain, IS21 transposase-type YPD4_2051 IPR006120 Resolvase, HTH domain YPD4_2052 IPR003593 AAA+ ATPase domain YPD4_2052 IPR001270 ClpA/B family YPD4_2052 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_2052 IPR002611 IstB-like ATP-binding protein YPD4_2052 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2054 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPD4_2054 IPR001608 Alanine racemase, N-terminal YPD4_2054 IPR011079 Alanine racemase, C-terminal YPD4_2054 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPD4_2054 IPR000821 Alanine racemase YPD4_2054 IPR029066 PLP-binding barrel YPD4_2056 IPR005594 YadA-like, C-terminal YPD4_2056 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_2056 IPR024973 ESPR domain YPD4_2056 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPD4_2056 IPR008640 Head domain of trimeric autotransporter adhesin YPD4_2057 IPR008640 Head domain of trimeric autotransporter adhesin YPD4_2057 IPR024973 ESPR domain YPD4_2057 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPD4_2057 IPR005594 YadA-like, C-terminal YPD4_2057 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_2058 IPR036366 PGBD superfamily YPD4_2058 IPR036365 PGBD-like superfamily YPD4_2058 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPD4_2058 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPD4_2059 IPR007439 Chemotaxis phosphatase, CheZ YPD4_2060 IPR011006 CheY-like superfamily YPD4_2060 IPR001789 Signal transduction response regulator, receiver domain YPD4_2061 IPR011006 CheY-like superfamily YPD4_2061 IPR035909 Methylesterase CheB, C-terminal YPD4_2061 IPR001789 Signal transduction response regulator, receiver domain YPD4_2061 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YPD4_2061 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type YPD4_2062 IPR026024 Chemotaxis protein methyltransferase CheR YPD4_2062 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily YPD4_2062 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPD4_2062 IPR000780 MCP methyltransferase, CheR-type YPD4_2062 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2062 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPD4_2063 IPR003660 HAMP domain YPD4_2063 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPD4_2063 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPD4_2063 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_2063 IPR004090 Chemotaxis methyl-accepting receptor YPD4_2063 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPD4_2064 IPR004090 Chemotaxis methyl-accepting receptor YPD4_2064 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPD4_2064 IPR003660 HAMP domain YPD4_2064 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPD4_2064 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPD4_2064 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_2067 IPR036709 Autotransporter beta-domain superfamily YPD4_2067 IPR013425 Autotransporter-associated beta strand repeat YPD4_2067 IPR005546 Autotransporter beta-domain YPD4_2067 IPR011050 Pectin lyase fold/virulence factor YPD4_2067 IPR006315 Outer membrane autotransporter barrel YPD4_2067 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_2068 IPR039446 Transcriptional regulator DauR-like YPD4_2068 IPR013559 YheO-like YPD4_2068 IPR039445 Transcriptional regulator DauR-like, HTH domain YPD4_2070 IPR035959 RutC-like superfamily YPD4_2070 IPR006056 RidA family YPD4_2070 IPR019897 RidA, conserved site YPD4_2070 IPR006175 YjgF/YER057c/UK114 family YPD4_2071 IPR036259 MFS transporter superfamily YPD4_2071 IPR011701 Major facilitator superfamily YPD4_2071 IPR020846 Major facilitator superfamily domain YPD4_2072 IPR002545 CheW-like domain YPD4_2072 IPR036061 CheW-like domain superfamily YPD4_2072 IPR039315 Chemotaxis protein CheW YPD4_2073 IPR015162 CheY binding YPD4_2073 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2073 IPR004105 Histidine kinase CheA-like, homodimeric domain YPD4_2073 IPR002545 CheW-like domain YPD4_2073 IPR036061 CheW-like domain superfamily YPD4_2073 IPR005467 Histidine kinase domain YPD4_2073 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2073 IPR035891 CheY-binding domain of CheA YPD4_2073 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2073 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2073 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily YPD4_2073 IPR036641 HPT domain superfamily YPD4_2073 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPD4_2075 IPR036737 OmpA-like domain superfamily YPD4_2075 IPR006665 OmpA-like domain YPD4_2075 IPR025713 Motility protein B, N-terminal domain YPD4_2076 IPR000540 Flagellar motor protein MotA, conserved site YPD4_2076 IPR002898 MotA/TolQ/ExbB proton channel YPD4_2076 IPR022522 Flagellar motor stator, MotA YPD4_2077 IPR007944 Flagellar transcriptional activator FlhC YPD4_2078 IPR023299 P-type ATPase, cytoplasmic domain N YPD4_2078 IPR023298 P-type ATPase, transmembrane domain superfamily YPD4_2078 IPR004014 Cation-transporting P-type ATPase, N-terminal YPD4_2078 IPR006068 Cation-transporting P-type ATPase, C-terminal YPD4_2078 IPR006415 P-type ATPase, subfamily IIIB YPD4_2078 IPR018303 P-type ATPase, phosphorylation site YPD4_2078 IPR023214 HAD superfamily YPD4_2078 IPR036412 HAD-like superfamily YPD4_2078 IPR008250 P-type ATPase, A domain superfamily YPD4_2078 IPR001757 P-type ATPase YPD4_2079 IPR003416 MgtC/SapB/SrpB/YhiD family YPD4_2080 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPD4_2080 IPR003660 HAMP domain YPD4_2080 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPD4_2080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_2080 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPD4_2080 IPR004090 Chemotaxis methyl-accepting receptor YPD4_2081 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPD4_2081 IPR004090 Chemotaxis methyl-accepting receptor YPD4_2081 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPD4_2081 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPD4_2081 IPR003660 HAMP domain YPD4_2081 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_2082 IPR032312 Beta-galactosidase, domain 4 YPD4_2082 IPR013783 Immunoglobulin-like fold YPD4_2082 IPR017853 Glycoside hydrolase superfamily YPD4_2082 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YPD4_2082 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily YPD4_2082 IPR011013 Galactose mutarotase-like domain superfamily YPD4_2082 IPR004199 Beta galactosidase small chain/ domain 5 YPD4_2082 IPR023230 Glycoside hydrolase, family 2, conserved site YPD4_2082 IPR006103 Glycoside hydrolase family 2, catalytic domain YPD4_2082 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YPD4_2082 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YPD4_2082 IPR023232 Glycoside hydrolase, family 2, active site YPD4_2082 IPR008979 Galactose-binding-like domain superfamily YPD4_2082 IPR006101 Glycoside hydrolase, family 2 YPD4_2082 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPD4_2083 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_2083 IPR013968 Polyketide synthase, ketoreductase domain YPD4_2083 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPD4_2083 IPR009081 Phosphopantetheine binding ACP domain YPD4_2083 IPR036736 ACP-like superfamily YPD4_2083 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPD4_2083 IPR020843 Polyketide synthase, enoylreductase domain YPD4_2083 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_2083 IPR020807 Polyketide synthase, dehydratase domain YPD4_2083 IPR018201 Beta-ketoacyl synthase, active site YPD4_2083 IPR042104 Polyketide synthase, dehydratase domain superfamily YPD4_2083 IPR014043 Acyl transferase YPD4_2083 IPR013154 Alcohol dehydrogenase, N-terminal YPD4_2083 IPR016039 Thiolase-like YPD4_2083 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_2083 IPR013149 Alcohol dehydrogenase, C-terminal YPD4_2083 IPR011032 GroES-like superfamily YPD4_2083 IPR036291 NAD(P)-binding domain superfamily YPD4_2083 IPR032821 Ketoacyl-synthetase, C-terminal extension YPD4_2083 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPD4_2084 IPR019713 Inner membrane protein YlaC YPD4_2085 IPR011991 ArsR-like helix-turn-helix domain YPD4_2085 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2085 IPR011008 Dimeric alpha-beta barrel YPD4_2085 IPR019888 Transcription regulator AsnC-type YPD4_2085 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPD4_2085 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2085 IPR000485 AsnC-type HTH domain YPD4_2085 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPD4_2087 IPR033379 Histidine acid phosphatase active site YPD4_2087 IPR000560 Histidine phosphatase superfamily, clade-2 YPD4_2087 IPR029033 Histidine phosphatase superfamily YPD4_2088 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2088 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2088 IPR002577 Helix-turn-helix, HxlR type YPD4_2089 IPR008030 NmrA-like domain YPD4_2089 IPR036291 NAD(P)-binding domain superfamily YPD4_2090 IPR035965 PAS domain superfamily YPD4_2090 IPR001610 PAC motif YPD4_2090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_2090 IPR004090 Chemotaxis methyl-accepting receptor YPD4_2090 IPR013655 PAS fold-3 YPD4_2090 IPR003660 HAMP domain YPD4_2090 IPR000014 PAS domain YPD4_2091 IPR028082 Periplasmic binding protein-like I YPD4_2091 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_2091 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPD4_2091 IPR000843 LacI-type HTH domain YPD4_2092 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPD4_2092 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YPD4_2092 IPR024084 Isopropylmalate dehydrogenase-like domain YPD4_2093 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPD4_2093 IPR006145 Pseudouridine synthase, RsuA/RluA YPD4_2093 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_2093 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPD4_2093 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPD4_2094 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_2094 IPR033713 Phosphatase NudJ YPD4_2094 IPR000086 NUDIX hydrolase domain YPD4_2094 IPR020084 NUDIX hydrolase, conserved site YPD4_2094 IPR020476 NUDIX hydrolase YPD4_2095 IPR023382 Adenine nucleotide alpha hydrolase-like domains YPD4_2095 IPR004506 tRNA-specific 2-thiouridylase YPD4_2095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2096 IPR007451 High frequency lysogenization protein HflD YPD4_2096 IPR035932 HflD-like superfamily YPD4_2097 IPR008948 L-Aspartase-like YPD4_2097 IPR013539 Adenylosuccinate lyase PurB, C-terminal YPD4_2097 IPR004769 Adenylosuccinate lyase YPD4_2097 IPR022761 Fumarate lyase, N-terminal YPD4_2097 IPR000362 Fumarate lyase family YPD4_2097 IPR020557 Fumarate lyase, conserved site YPD4_2097 IPR024083 Fumarase/histidase, N-terminal YPD4_2099 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2099 IPR001789 Signal transduction response regulator, receiver domain YPD4_2099 IPR039420 Transcriptional regulatory protein WalR-like YPD4_2099 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_2099 IPR011006 CheY-like superfamily YPD4_2100 IPR003660 HAMP domain YPD4_2100 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2100 IPR038429 PhoQ Sensor superfamily YPD4_2100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2100 IPR005467 Histidine kinase domain YPD4_2100 IPR015014 PhoQ Sensor YPD4_2100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2101 IPR039994 JmjC domain-containing YPD4_2101 IPR003347 JmjC domain YPD4_2102 IPR011650 Peptidase M20, dimerisation domain YPD4_2102 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPD4_2102 IPR036264 Bacterial exopeptidase dimerisation domain YPD4_2102 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPD4_2102 IPR002933 Peptidase M20 YPD4_2103 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPD4_2103 IPR026591 Sirtuin, catalytic core small domain superfamily YPD4_2103 IPR003000 Sirtuin family YPD4_2103 IPR026590 Sirtuin family, catalytic core domain YPD4_2103 IPR027546 Sirtuin, class III YPD4_2104 IPR000600 ROK family YPD4_2105 IPR003838 ABC transporter permease protein domain YPD4_2105 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPD4_2105 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type YPD4_2105 IPR025857 MacB-like periplasmic core domain YPD4_2106 IPR003439 ABC transporter-like YPD4_2106 IPR003593 AAA+ ATPase domain YPD4_2106 IPR017871 ABC transporter, conserved site YPD4_2106 IPR015854 ABC transporter, lipoprotein release, LolD YPD4_2106 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2106 IPR011924 Lipoprotein releasing system, ATP-binding protein YPD4_2107 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPD4_2107 IPR003838 ABC transporter permease protein domain YPD4_2107 IPR025857 MacB-like periplasmic core domain YPD4_2108 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2108 IPR037235 TRCF-like, C-terminal domain YPD4_2108 IPR005118 Transcription-repair-coupling factor, C-terminal domain YPD4_2108 IPR041471 UvrB, interaction domain YPD4_2108 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_2108 IPR036101 CarD-like/TRCF domain superfamily YPD4_2108 IPR003711 CarD-like/TRCF domain YPD4_2108 IPR011545 DEAD/DEAH box helicase domain YPD4_2108 IPR001650 Helicase, C-terminal YPD4_2108 IPR004576 Transcription-repair coupling factor YPD4_2109 IPR008816 Glycine zipper 2TM domain YPD4_2110 IPR001207 Transposase, mutator type YPD4_2113 IPR023753 FAD/NAD(P)-binding domain YPD4_2113 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_2114 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPD4_2114 IPR029058 Alpha/Beta hydrolase fold YPD4_2114 IPR022987 Uncharacterised protein family UPF0227 YPD4_2115 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPD4_2115 IPR022956 Beta-hexosaminidase, bacterial YPD4_2115 IPR017853 Glycoside hydrolase superfamily YPD4_2115 IPR001764 Glycoside hydrolase, family 3, N-terminal YPD4_2115 IPR019800 Glycoside hydrolase, family 3, active site YPD4_2116 IPR014093 Thiamine kinase YPD4_2116 IPR011009 Protein kinase-like domain superfamily YPD4_2116 IPR002575 Aminoglycoside phosphotransferase YPD4_2117 IPR014094 Penicillin-binding protein activator LpoB YPD4_2117 IPR012640 Membrane lipoprotein, lipid attachment site YPD4_2118 IPR038483 YcfL-like superfamily YPD4_2118 IPR010824 Protein of unknown function DUF1425 YPD4_2119 IPR036265 HIT-like superfamily YPD4_2119 IPR011146 HIT-like domain YPD4_2119 IPR019808 Histidine triad, conserved site YPD4_2119 IPR001310 Histidine triad (HIT) protein YPD4_2120 IPR036291 NAD(P)-binding domain superfamily YPD4_2120 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPD4_2122 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPD4_2122 IPR011299 PTS system glucose-specific IIBC component YPD4_2122 IPR001996 Phosphotransferase system, IIB component, type 1 YPD4_2122 IPR013013 Phosphotransferase system, EIIC component, type 1 YPD4_2122 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPD4_2122 IPR036878 Glucose permease domain IIB YPD4_2122 IPR003352 Phosphotransferase system, EIIC YPD4_2123 IPR015991 Uncharacterised hydrolase TatD-type YPD4_2123 IPR032466 Metal-dependent hydrolase YPD4_2123 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPD4_2123 IPR001130 TatD family YPD4_2124 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPD4_2124 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2124 IPR004622 DNA polymerase III, delta prime subunit YPD4_2124 IPR015199 DNA polymerase III, delta subunit, C-terminal YPD4_2125 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2125 IPR039430 Thymidylate kinase-like domain YPD4_2125 IPR018094 Thymidylate kinase YPD4_2125 IPR018095 Thymidylate kinase, conserved site YPD4_2126 IPR003770 Endolytic murein transglycosylase YPD4_2127 IPR018300 Aminotransferase, class IV, conserved site YPD4_2127 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPD4_2127 IPR001544 Aminotransferase class IV YPD4_2127 IPR017824 Aminodeoxychorismate lyase, class IV YPD4_2128 IPR002686 Transposase IS200-like YPD4_2128 IPR036515 Transposase IS200-like superfamily YPD4_2129 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_2129 IPR000794 Beta-ketoacyl synthase YPD4_2129 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_2129 IPR018201 Beta-ketoacyl synthase, active site YPD4_2129 IPR016039 Thiolase-like YPD4_2129 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPD4_2129 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_2130 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPD4_2130 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_2130 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_2130 IPR036291 NAD(P)-binding domain superfamily YPD4_2131 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPD4_2131 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPD4_2131 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPD4_2131 IPR014043 Acyl transferase YPD4_2131 IPR001227 Acyl transferase domain superfamily YPD4_2131 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPD4_2132 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPD4_2132 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPD4_2132 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPD4_2132 IPR016039 Thiolase-like YPD4_2133 IPR003664 Fatty acid synthesis PlsX protein YPD4_2133 IPR012281 Phospholipid biosynthesis protein, PlsX-like YPD4_2134 IPR003772 Large ribosomal RNA subunit accumulation protein YceD YPD4_2134 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria YPD4_2135 IPR029001 Inosine triphosphate pyrophosphatase-like YPD4_2135 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPD4_2137 IPR006145 Pseudouridine synthase, RsuA/RluA YPD4_2137 IPR036986 RNA-binding S4 domain superfamily YPD4_2137 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_2137 IPR002942 RNA-binding S4 domain YPD4_2137 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPD4_2137 IPR006225 Pseudouridine synthase, RluC/RluD YPD4_2138 IPR022967 RNA-binding domain, S1 YPD4_2138 IPR028878 Ribonuclease E YPD4_2138 IPR012340 Nucleic acid-binding, OB-fold YPD4_2138 IPR021968 Polyribonucleotide phosphorylase C-terminal YPD4_2138 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPD4_2138 IPR004659 Ribonuclease E/G YPD4_2138 IPR003029 S1 domain YPD4_2139 IPR001207 Transposase, mutator type YPD4_2140 IPR032466 Metal-dependent hydrolase YPD4_2140 IPR004721 Dihydroorotase homodimeric type YPD4_2140 IPR006680 Amidohydrolase-related YPD4_2140 IPR002195 Dihydroorotase, conserved site YPD4_2141 IPR001207 Transposase, mutator type YPD4_2142 IPR023493 N-methyl-L-tryptophan oxidase MTOX YPD4_2142 IPR006076 FAD dependent oxidoreductase YPD4_2142 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_2143 IPR001789 Signal transduction response regulator, receiver domain YPD4_2143 IPR000792 Transcription regulator LuxR, C-terminal YPD4_2143 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_2144 IPR002549 Transmembrane protein TqsA-like YPD4_2147 IPR001690 Autoinducer synthase YPD4_2147 IPR018311 Autoinducer synthesis, conserved site YPD4_2147 IPR016181 Acyl-CoA N-acyltransferase YPD4_2148 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2148 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPD4_2148 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_2148 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPD4_2148 IPR000792 Transcription regulator LuxR, C-terminal YPD4_2149 IPR000847 Transcription regulator HTH, LysR YPD4_2149 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2149 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2149 IPR005119 LysR, substrate-binding YPD4_2150 IPR020846 Major facilitator superfamily domain YPD4_2150 IPR005828 Major facilitator, sugar transporter-like YPD4_2150 IPR036259 MFS transporter superfamily YPD4_2150 IPR005829 Sugar transporter, conserved site YPD4_2152 IPR020471 Aldo/keto reductase YPD4_2152 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_2152 IPR023210 NADP-dependent oxidoreductase domain YPD4_2153 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST YPD4_2154 IPR013399 CRISPR-associated protein Csy3 YPD4_2155 IPR013398 CRISPR-associated protein Csy2 YPD4_2156 IPR013397 CRISPR-associated protein Csy1 YPD4_2157 IPR006483 CRISPR-associated Cas3-type HD domain YPD4_2157 IPR038257 CRISPR-associated Cas3-type HD domain superfamily YPD4_2157 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPD4_2157 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2158 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain YPD4_2158 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain YPD4_2158 IPR002729 CRISPR-associated protein Cas1 YPD4_2158 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPD4_2159 IPR010920 LSM domain superfamily YPD4_2159 IPR006685 Mechanosensitive ion channel MscS YPD4_2159 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPD4_2159 IPR030192 Miniconductance mechanosensitive channel YbdG YPD4_2163 IPR007184 Mannoside phosphorylase YPD4_2163 IPR028583 4-O-beta-D-mannosyl-D-glucose phosphorylase YPD4_2163 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily YPD4_2164 IPR035906 MetI-like superfamily YPD4_2164 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2165 IPR035906 MetI-like superfamily YPD4_2165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2167 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_2167 IPR028082 Periplasmic binding protein-like I YPD4_2167 IPR000843 LacI-type HTH domain YPD4_2168 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPD4_2168 IPR016066 Alpha-D-phosphohexomutase, conserved site YPD4_2168 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPD4_2168 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPD4_2168 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPD4_2168 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPD4_2168 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPD4_2168 IPR005841 Alpha-D-phosphohexomutase superfamily YPD4_2169 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_2169 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPD4_2169 IPR017871 ABC transporter, conserved site YPD4_2169 IPR040582 MalK, OB fold domain YPD4_2169 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2169 IPR003439 ABC transporter-like YPD4_2169 IPR003593 AAA+ ATPase domain YPD4_2171 IPR006914 VENN motif-containing domain YPD4_2171 IPR008619 Filamentous haemagglutinin repeat YPD4_2171 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_2171 IPR025157 Hemagglutinin repeat YPD4_2171 IPR028190 Novel toxin 21 YPD4_2171 IPR038181 Novel toxin 21 superfamily YPD4_2171 IPR012334 Pectin lyase fold YPD4_2171 IPR011050 Pectin lyase fold/virulence factor YPD4_2171 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPD4_2173 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPD4_2173 IPR008619 Filamentous haemagglutinin repeat YPD4_2173 IPR006914 VENN motif-containing domain YPD4_2173 IPR025157 Hemagglutinin repeat YPD4_2173 IPR011050 Pectin lyase fold/virulence factor YPD4_2173 IPR012334 Pectin lyase fold YPD4_2173 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_2173 IPR028190 Novel toxin 21 YPD4_2173 IPR038181 Novel toxin 21 superfamily YPD4_2174 IPR025157 Hemagglutinin repeat YPD4_2174 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_2174 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPD4_2174 IPR024973 ESPR domain YPD4_2174 IPR012334 Pectin lyase fold YPD4_2174 IPR011050 Pectin lyase fold/virulence factor YPD4_2174 IPR006914 VENN motif-containing domain YPD4_2176 IPR012334 Pectin lyase fold YPD4_2176 IPR024973 ESPR domain YPD4_2176 IPR011050 Pectin lyase fold/virulence factor YPD4_2176 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_2176 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPD4_2176 IPR025157 Hemagglutinin repeat YPD4_2176 IPR006914 VENN motif-containing domain YPD4_2177 IPR005565 Haemolysin activator HlyB, C-terminal YPD4_2177 IPR034746 POTRA domain YPD4_2177 IPR027282 Two partner secretion pathway transporter YPD4_2177 IPR035251 ShlB, POTRA domain YPD4_2177 IPR013686 Polypeptide-transport-associated, ShlB-type YPD4_2178 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_2178 IPR017938 Riboflavin synthase-like beta-barrel YPD4_2178 IPR000951 Phthalate dioxygenase reductase YPD4_2178 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_2178 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_2178 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPD4_2178 IPR012675 Beta-grasp domain superfamily YPD4_2178 IPR039003 Carnitine monooxygenase reductase subunit YPD4_2178 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPD4_2178 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_2178 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_2179 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPD4_2179 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YPD4_2179 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPD4_2179 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPD4_2179 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YPD4_2179 IPR039004 Carnitine monooxygenase oxygenase subunit YPD4_2180 IPR000060 BCCT transporter family YPD4_2180 IPR018093 BCCT transporter, conserved site YPD4_2181 IPR024084 Isopropylmalate dehydrogenase-like domain YPD4_2181 IPR011829 Tartrate dehydrogenase YPD4_2181 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPD4_2182 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2182 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2182 IPR005119 LysR, substrate-binding YPD4_2182 IPR000847 Transcription regulator HTH, LysR YPD4_2183 IPR000843 LacI-type HTH domain YPD4_2183 IPR028082 Periplasmic binding protein-like I YPD4_2183 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_2184 IPR001851 ABC transporter, permease YPD4_2185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2185 IPR017871 ABC transporter, conserved site YPD4_2185 IPR003593 AAA+ ATPase domain YPD4_2185 IPR003439 ABC transporter-like YPD4_2185 IPR015861 ABC transporter, ribose import, RbsA YPD4_2186 IPR028082 Periplasmic binding protein-like I YPD4_2186 IPR025997 Periplasmic binding protein YPD4_2187 IPR011032 GroES-like superfamily YPD4_2187 IPR013149 Alcohol dehydrogenase, C-terminal YPD4_2187 IPR036291 NAD(P)-binding domain superfamily YPD4_2187 IPR013154 Alcohol dehydrogenase, N-terminal YPD4_2187 IPR020843 Polyketide synthase, enoylreductase domain YPD4_2191 IPR000758 Virulence-related outer membrane protein YPD4_2191 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_2191 IPR027385 Outer membrane protein beta-barrel domain YPD4_2192 IPR000620 EamA domain YPD4_2194 IPR023506 Trans-aconitate 2-methyltransferase YPD4_2194 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2194 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YPD4_2194 IPR041698 Methyltransferase domain 25 YPD4_2195 IPR023188 DNA-binding protein Dps, conserved site YPD4_2195 IPR009078 Ferritin-like superfamily YPD4_2195 IPR012347 Ferritin-like YPD4_2195 IPR023067 DNA protection during starvation protein, gammaproteobacteria YPD4_2195 IPR002177 DNA-binding protein Dps YPD4_2195 IPR008331 Ferritin/DPS protein domain YPD4_2197 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_2197 IPR018313 Solute-binding protein family 3, conserved site YPD4_2197 IPR001320 Ionotropic glutamate receptor YPD4_2198 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2198 IPR035906 MetI-like superfamily YPD4_2198 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_2199 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2199 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPD4_2199 IPR017871 ABC transporter, conserved site YPD4_2199 IPR003439 ABC transporter-like YPD4_2199 IPR003593 AAA+ ATPase domain YPD4_2200 IPR000014 PAS domain YPD4_2200 IPR000700 PAS-associated, C-terminal YPD4_2200 IPR035965 PAS domain superfamily YPD4_2200 IPR013655 PAS fold-3 YPD4_2200 IPR001610 PAC motif YPD4_2200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_2200 IPR004090 Chemotaxis methyl-accepting receptor YPD4_2201 IPR001584 Integrase, catalytic core YPD4_2201 IPR036397 Ribonuclease H superfamily YPD4_2201 IPR006120 Resolvase, HTH domain YPD4_2201 IPR012337 Ribonuclease H-like superfamily YPD4_2201 IPR017894 HTH domain, IS21 transposase-type YPD4_2202 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2202 IPR002611 IstB-like ATP-binding protein YPD4_2202 IPR003593 AAA+ ATPase domain YPD4_2202 IPR001270 ClpA/B family YPD4_2202 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_2205 IPR000340 Dual specificity phosphatase, catalytic domain YPD4_2205 IPR020422 Dual specificity protein phosphatase domain YPD4_2205 IPR003595 Protein-tyrosine phosphatase, catalytic YPD4_2205 IPR000387 Tyrosine specific protein phosphatases domain YPD4_2205 IPR016130 Protein-tyrosine phosphatase, active site YPD4_2205 IPR029021 Protein-tyrosine phosphatase-like YPD4_2206 IPR022744 Methyltransferase domain, putative YPD4_2206 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2206 IPR022742 Serine aminopeptidase, S33 YPD4_2206 IPR029058 Alpha/Beta hydrolase fold YPD4_2207 IPR016676 Phospholipid/glycerol acyltransferase, predicted YPD4_2207 IPR002123 Phospholipid/glycerol acyltransferase YPD4_2208 IPR000374 Phosphatidate cytidylyltransferase YPD4_2209 IPR000462 CDP-alcohol phosphatidyltransferase YPD4_2211 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPD4_2211 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YPD4_2211 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPD4_2211 IPR036291 NAD(P)-binding domain superfamily YPD4_2211 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YPD4_2212 IPR036515 Transposase IS200-like superfamily YPD4_2212 IPR002686 Transposase IS200-like YPD4_2213 IPR029057 Phosphoribosyltransferase-like YPD4_2213 IPR000836 Phosphoribosyltransferase domain YPD4_2213 IPR005765 Uracil phosphoribosyl transferase YPD4_2213 IPR034332 Uracil phosphoribosyltransferase, bacterial-type YPD4_2214 IPR036676 PurM-like, C-terminal domain superfamily YPD4_2214 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YPD4_2214 IPR036921 PurM-like, N-terminal domain superfamily YPD4_2214 IPR010918 PurM-like, C-terminal domain YPD4_2214 IPR016188 PurM-like, N-terminal domain YPD4_2215 IPR004607 Phosphoribosylglycinamide formyltransferase YPD4_2215 IPR002376 Formyl transferase, N-terminal YPD4_2215 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPD4_2215 IPR036477 Formyl transferase, N-terminal domain superfamily YPD4_2216 IPR000182 GNAT domain YPD4_2216 IPR016181 Acyl-CoA N-acyltransferase YPD4_2219 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2219 IPR005670 Phosphate transport system permease protein 1 YPD4_2219 IPR015850 ABC transporter, phosphate import, PstB YPD4_2219 IPR017871 ABC transporter, conserved site YPD4_2219 IPR003439 ABC transporter-like YPD4_2219 IPR003593 AAA+ ATPase domain YPD4_2220 IPR005672 Phosphate transport system permease protein PstA YPD4_2220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2220 IPR035906 MetI-like superfamily YPD4_2221 IPR011864 Phosphate ABC transporter, permease protein PstC YPD4_2221 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2221 IPR035906 MetI-like superfamily YPD4_2222 IPR025198 Polyphosphate kinase N-terminal domain YPD4_2222 IPR024953 Polyphosphate kinase middle domain YPD4_2222 IPR036830 Polyphosphate kinase middle domain superfamily YPD4_2222 IPR025200 Polyphosphate kinase C-terminal domain 2 YPD4_2222 IPR036832 Polyphosphate kinase N-terminal domain superfamily YPD4_2222 IPR003414 Polyphosphate kinase YPD4_2222 IPR001736 Phospholipase D/Transphosphatidylase YPD4_2222 IPR041108 Polyphosphate kinase, C-terminal domain 1 YPD4_2223 IPR022371 Exopolyphosphatase YPD4_2223 IPR003695 Ppx/GppA phosphatase YPD4_2223 IPR030673 Pyrophosphatase, GppA/Ppx-type YPD4_2224 IPR006667 SLC41 divalent cation transporters, integral membrane domain YPD4_2224 IPR038076 MgtE, N-terminal domain superfamily YPD4_2224 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily YPD4_2224 IPR038048 Magnesium transporter MgtE, transmembrane domain YPD4_2224 IPR006669 Magnesium transporter MgtE YPD4_2224 IPR000644 CBS domain YPD4_2224 IPR006668 Magnesium transporter, MgtE intracellular domain YPD4_2225 IPR042054 YegD-like YPD4_2225 IPR018181 Heat shock protein 70, conserved site YPD4_2225 IPR013126 Heat shock protein 70 family YPD4_2226 IPR035906 MetI-like superfamily YPD4_2226 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2228 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2228 IPR035906 MetI-like superfamily YPD4_2230 IPR005814 Aminotransferase class-III YPD4_2230 IPR004632 4-aminobutyrate aminotransferase, bacterial YPD4_2230 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2231 IPR004839 Aminotransferase, class I/classII YPD4_2231 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2231 IPR000524 Transcription regulator HTH, GntR YPD4_2231 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2231 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2231 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2232 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2232 IPR017871 ABC transporter, conserved site YPD4_2232 IPR003439 ABC transporter-like YPD4_2232 IPR013611 Transport-associated OB, type 2 YPD4_2232 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPD4_2232 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPD4_2232 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_2232 IPR003593 AAA+ ATPase domain YPD4_2233 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPD4_2233 IPR022824 Multidrug resistance protein MdtA YPD4_2233 IPR006143 RND efflux pump, membrane fusion protein YPD4_2234 IPR022831 Multidrug resistance protein MdtB YPD4_2234 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_2234 IPR001036 Acriflavin resistance protein YPD4_2235 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_2235 IPR001036 Acriflavin resistance protein YPD4_2235 IPR023931 Multidrug resistance protein MdtC YPD4_2236 IPR036259 MFS transporter superfamily YPD4_2236 IPR011701 Major facilitator superfamily YPD4_2236 IPR004638 Drug resistance transporter EmrB-like YPD4_2236 IPR020846 Major facilitator superfamily domain YPD4_2236 IPR023721 Multidrug resistance protein MdtD YPD4_2237 IPR005467 Histidine kinase domain YPD4_2237 IPR003660 HAMP domain YPD4_2237 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2237 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2237 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2237 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2237 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2238 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_2238 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_2238 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2238 IPR011006 CheY-like superfamily YPD4_2238 IPR039420 Transcriptional regulatory protein WalR-like YPD4_2238 IPR001789 Signal transduction response regulator, receiver domain YPD4_2239 IPR010879 Domain of unknown function DUF1508 YPD4_2239 IPR036913 YegP-like superfamily YPD4_2241 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPD4_2241 IPR022433 Lipid kinase YegS YPD4_2241 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPD4_2241 IPR005218 Diacylglycerol/lipid kinase YPD4_2241 IPR001206 Diacylglycerol kinase, catalytic domain YPD4_2242 IPR014453 Inhibitor of vertebrate lysozyme YPD4_2242 IPR036501 Inhibitor of vertebrate lysozyme superfamily YPD4_2244 IPR029056 Ribokinase-like YPD4_2244 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YPD4_2244 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPD4_2246 IPR001207 Transposase, mutator type YPD4_2250 IPR036624 Hcp1-like superfamily YPD4_2250 IPR008514 Type VI secretion system effector, Hcp YPD4_2251 IPR036515 Transposase IS200-like superfamily YPD4_2251 IPR002686 Transposase IS200-like YPD4_2252 IPR025777 GMP synthetase ATP pyrophosphatase domain YPD4_2252 IPR022310 NAD/GMP synthase YPD4_2252 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2252 IPR029062 Class I glutamine amidotransferase-like YPD4_2252 IPR004739 GMP synthase, glutamine amidotransferase YPD4_2252 IPR017926 Glutamine amidotransferase YPD4_2252 IPR001674 GMP synthase, C-terminal YPD4_2252 IPR022955 GMP synthase YPD4_2253 IPR013785 Aldolase-type TIM barrel YPD4_2253 IPR005990 Inosine-5'-monophosphate dehydrogenase YPD4_2253 IPR001093 IMP dehydrogenase/GMP reductase YPD4_2253 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPD4_2253 IPR000644 CBS domain YPD4_2254 IPR003753 Exonuclease VII, large subunit YPD4_2254 IPR020579 Exonuclease VII, large subunit, C-terminal YPD4_2254 IPR025824 OB-fold nucleic acid binding domain YPD4_2256 IPR032859 GTPase Der, C-terminal KH-domain-like YPD4_2256 IPR015946 K homology domain-like, alpha/beta YPD4_2256 IPR016484 GTP-binding protein EngA YPD4_2256 IPR006073 GTP binding domain YPD4_2256 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2256 IPR031166 EngA-type guanine nucleotide-binding (G) domain YPD4_2256 IPR005225 Small GTP-binding protein domain YPD4_2257 IPR017687 Outer membrane protein assembly factor BamB YPD4_2257 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPD4_2257 IPR002372 Pyrrolo-quinoline quinone repeat YPD4_2257 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YPD4_2257 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPD4_2258 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_2258 IPR026039 Uncharacterised protein family UPF0070 YPD4_2258 IPR018704 Tetratricopeptide repeat-like domain YPD4_2259 IPR004154 Anticodon-binding YPD4_2259 IPR036621 Anticodon-binding domain superfamily YPD4_2259 IPR015807 Histidine-tRNA ligase YPD4_2259 IPR033656 Histidyl-anticodon-binding YPD4_2259 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain YPD4_2259 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YPD4_2259 IPR006195 Aminoacyl-tRNA synthetase, class II YPD4_2260 IPR011005 Dihydropteroate synthase-like YPD4_2260 IPR036849 Enolase-like, C-terminal domain superfamily YPD4_2260 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YPD4_2260 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YPD4_2261 IPR023690 Cytoskeleton protein RodZ YPD4_2261 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_2261 IPR025194 Domain of unknown function DUF4115 YPD4_2261 IPR001387 Cro/C1-type helix-turn-helix domain YPD4_2263 IPR027492 Dual-specificity RNA methyltransferase RlmN YPD4_2263 IPR007197 Radical SAM YPD4_2263 IPR040072 Methyltransferase (Class A) YPD4_2263 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YPD4_2263 IPR013785 Aldolase-type TIM barrel YPD4_2264 IPR036850 Nucleoside diphosphate kinase-like domain superfamily YPD4_2264 IPR023005 Nucleoside diphosphate kinase, active site YPD4_2264 IPR034907 Nucleoside diphosphate kinase-like domain YPD4_2264 IPR001564 Nucleoside diphosphate kinase YPD4_2266 IPR036709 Autotransporter beta-domain superfamily YPD4_2266 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_2266 IPR005546 Autotransporter beta-domain YPD4_2266 IPR030930 Adhesin of bacterial autotransporter system YPD4_2266 IPR011050 Pectin lyase fold/virulence factor YPD4_2266 IPR004899 Pertactin, central region YPD4_2266 IPR003991 Pertactin virulence factor family YPD4_2266 IPR006315 Outer membrane autotransporter barrel YPD4_2267 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_2267 IPR003991 Pertactin virulence factor family YPD4_2267 IPR004899 Pertactin, central region YPD4_2267 IPR030930 Adhesin of bacterial autotransporter system YPD4_2267 IPR011050 Pectin lyase fold/virulence factor YPD4_2267 IPR006315 Outer membrane autotransporter barrel YPD4_2267 IPR036709 Autotransporter beta-domain superfamily YPD4_2267 IPR005546 Autotransporter beta-domain YPD4_2269 IPR027945 SseB protein, C-terminal YPD4_2269 IPR009839 SseB protein N-terminal domain YPD4_2270 IPR001346 Interferon regulatory factor DNA-binding domain YPD4_2270 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPD4_2270 IPR008330 Peptidase M17, peptidase B YPD4_2270 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPD4_2271 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_2271 IPR012675 Beta-grasp domain superfamily YPD4_2271 IPR018298 Adrenodoxin, iron-sulphur binding site YPD4_2271 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria YPD4_2271 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_2271 IPR001055 Adrenodoxin YPD4_2272 IPR013126 Heat shock protein 70 family YPD4_2272 IPR042039 HscA chaperone, nucleotide-binding domain YPD4_2272 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPD4_2272 IPR018181 Heat shock protein 70, conserved site YPD4_2272 IPR010236 ISC system FeS cluster assembly, HscA chaperone YPD4_2272 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPD4_2273 IPR036869 Chaperone J-domain superfamily YPD4_2273 IPR036386 HscB, C-terminal domain superfamily YPD4_2273 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YPD4_2273 IPR001623 DnaJ domain YPD4_2273 IPR004640 Co-chaperone Hsc20 YPD4_2274 IPR017870 FeS cluster insertion, C-terminal, conserved site YPD4_2274 IPR016092 FeS cluster insertion protein YPD4_2274 IPR035903 HesB-like domain superfamily YPD4_2274 IPR000361 FeS cluster biogenesis YPD4_2274 IPR011302 Iron-binding protein IscA, proteobacteria YPD4_2275 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YPD4_2275 IPR011339 ISC system FeS cluster assembly, IscU scaffold YPD4_2276 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2276 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2276 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2276 IPR000192 Aminotransferase class V domain YPD4_2276 IPR016454 Cysteine desulfurase YPD4_2276 IPR010240 Cysteine desulfurase IscS YPD4_2276 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_2277 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2277 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2277 IPR016454 Cysteine desulfurase YPD4_2277 IPR000192 Aminotransferase class V domain YPD4_2277 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_2277 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2277 IPR010240 Cysteine desulfurase IscS YPD4_2278 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2278 IPR010242 Transcription factor HTH, IscR YPD4_2278 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2278 IPR000944 Transcription regulator Rrf2-type YPD4_2278 IPR030489 Transcription regulator Rrf2-type, conserved site YPD4_2279 IPR004384 RNA methyltransferase TrmJ/LasT YPD4_2279 IPR029028 Alpha/beta knot methyltransferases YPD4_2279 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_2279 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPD4_2280 IPR020583 Inositol monophosphatase, metal-binding site YPD4_2280 IPR000760 Inositol monophosphatase-like YPD4_2280 IPR020550 Inositol monophosphatase, conserved site YPD4_2280 IPR022337 Inositol monophosphatase, SuhB YPD4_2280 IPR033942 Inositol monophosphatase YPD4_2281 IPR002686 Transposase IS200-like YPD4_2281 IPR036515 Transposase IS200-like superfamily YPD4_2282 IPR011541 Nickel/cobalt transporter, high-affinity YPD4_2283 IPR016537 Uncharacterised conserved protein UCP008159, YPD4_2283 IPR010412 Protein of unknown function DUF1007 YPD4_2284 IPR011608 PRD domain YPD4_2284 IPR036634 PRD domain superfamily YPD4_2285 IPR036259 MFS transporter superfamily YPD4_2285 IPR024989 Major facilitator superfamily associated domain YPD4_2285 IPR026032 Probable 3-phenylpropionic acid transporter YPD4_2286 IPR036259 MFS transporter superfamily YPD4_2286 IPR024989 Major facilitator superfamily associated domain YPD4_2286 IPR026032 Probable 3-phenylpropionic acid transporter YPD4_2287 IPR027385 Outer membrane protein beta-barrel domain YPD4_2287 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPD4_2287 IPR000758 Virulence-related outer membrane protein YPD4_2288 IPR039429 Serine hydroxymethyltransferase-like domain YPD4_2288 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YPD4_2288 IPR001085 Serine hydroxymethyltransferase YPD4_2288 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2288 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2288 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2289 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_2289 IPR009050 Globin-like superfamily YPD4_2289 IPR012292 Globin/Protoglobin YPD4_2289 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPD4_2289 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_2289 IPR023950 Flavohemoprotein YPD4_2289 IPR000971 Globin YPD4_2289 IPR017938 Riboflavin synthase-like beta-barrel YPD4_2289 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPD4_2289 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_2290 IPR032791 Uncharacterised protein YhfZ, C-terminal domain YPD4_2290 IPR041444 YhfZ, helix-turn-helix domain YPD4_2291 IPR032791 Uncharacterised protein YhfZ, C-terminal domain YPD4_2291 IPR041444 YhfZ, helix-turn-helix domain YPD4_2292 IPR017918 Nitrogen regulatory protein PII, conserved site YPD4_2292 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPD4_2292 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPD4_2292 IPR002187 Nitrogen regulatory protein PII YPD4_2292 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPD4_2293 IPR003010 Carbon-nitrogen hydrolase YPD4_2293 IPR003694 NAD(+) synthetase YPD4_2293 IPR000132 Nitrilase/cyanide hydratase, conserved site YPD4_2293 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2293 IPR014445 Glutamine-dependent NAD(+) synthetase YPD4_2293 IPR036526 Carbon-nitrogen hydrolase superfamily YPD4_2293 IPR022310 NAD/GMP synthase YPD4_2294 IPR011006 CheY-like superfamily YPD4_2294 IPR003593 AAA+ ATPase domain YPD4_2294 IPR009057 Homeobox-like domain superfamily YPD4_2294 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2294 IPR001789 Signal transduction response regulator, receiver domain YPD4_2294 IPR002078 RNA polymerase sigma factor 54 interaction domain YPD4_2294 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPD4_2294 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_2294 IPR025944 Sigma-54 interaction domain, conserved site YPD4_2295 IPR025262 Quorum-sensing regulator protein G YPD4_2296 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2296 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2296 IPR005467 Histidine kinase domain YPD4_2296 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2296 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2296 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2300 IPR036676 PurM-like, C-terminal domain superfamily YPD4_2300 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily YPD4_2300 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain YPD4_2300 IPR010073 Phosphoribosylformylglycinamidine synthase PurL YPD4_2300 IPR017926 Glutamine amidotransferase YPD4_2300 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal YPD4_2300 IPR036921 PurM-like, N-terminal domain superfamily YPD4_2300 IPR010918 PurM-like, C-terminal domain YPD4_2300 IPR029062 Class I glutamine amidotransferase-like YPD4_2301 IPR008258 Transglycosylase SLT domain 1 YPD4_2301 IPR000189 Prokaryotic transglycosylase, active site YPD4_2301 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_2301 IPR023703 Membrane-bound lytic murein transglycosylase F YPD4_2301 IPR023346 Lysozyme-like domain superfamily YPD4_2302 IPR028883 tRNA-specific adenosine deaminase YPD4_2302 IPR002125 Cytidine and deoxycytidylate deaminase domain YPD4_2302 IPR016193 Cytidine deaminase-like YPD4_2302 IPR016192 APOBEC/CMP deaminase, zinc-binding YPD4_2303 IPR023214 HAD superfamily YPD4_2303 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YPD4_2303 IPR036412 HAD-like superfamily YPD4_2304 IPR005486 Glucokinase regulatory protein, conserved site YPD4_2304 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein YPD4_2304 IPR001347 Sugar isomerase (SIS) YPD4_2304 IPR009060 UBA-like superfamily YPD4_2304 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YPD4_2305 IPR000281 Helix-turn-helix protein RpiR YPD4_2305 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2305 IPR001347 Sugar isomerase (SIS) YPD4_2305 IPR035472 RpiR-like, SIS domain YPD4_2305 IPR009057 Homeobox-like domain superfamily YPD4_2306 IPR036515 Transposase IS200-like superfamily YPD4_2306 IPR002686 Transposase IS200-like YPD4_2307 IPR008278 4'-phosphopantetheinyl transferase domain YPD4_2307 IPR004568 Phosphopantetheine-protein transferase domain YPD4_2307 IPR002582 Holo-[acyl carrier protein] synthase YPD4_2307 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPD4_2308 IPR013785 Aldolase-type TIM barrel YPD4_2308 IPR036130 Pyridoxine 5'-phosphate synthase YPD4_2308 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YPD4_2309 IPR003593 AAA+ ATPase domain YPD4_2309 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_2309 IPR002611 IstB-like ATP-binding protein YPD4_2309 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2309 IPR001270 ClpA/B family YPD4_2310 IPR001584 Integrase, catalytic core YPD4_2310 IPR017894 HTH domain, IS21 transposase-type YPD4_2310 IPR012337 Ribonuclease H-like superfamily YPD4_2310 IPR036397 Ribonuclease H superfamily YPD4_2310 IPR006120 Resolvase, HTH domain YPD4_2311 IPR012340 Nucleic acid-binding, OB-fold YPD4_2311 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPD4_2311 IPR003717 Recombination protein O, RecO YPD4_2311 IPR037278 ARFGAP/RecO-like zinc finger YPD4_2312 IPR030388 Era-type guanine nucleotide-binding (G) domain YPD4_2312 IPR005662 GTP-binding protein Era YPD4_2312 IPR006073 GTP binding domain YPD4_2312 IPR015946 K homology domain-like, alpha/beta YPD4_2312 IPR005225 Small GTP-binding protein domain YPD4_2312 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2312 IPR004044 K Homology domain, type 2 YPD4_2312 IPR009019 K homology domain superfamily, prokaryotic type YPD4_2313 IPR014720 Double-stranded RNA-binding domain YPD4_2313 IPR000999 Ribonuclease III domain YPD4_2313 IPR011907 Ribonuclease III YPD4_2313 IPR036389 Ribonuclease III, endonuclease domain superfamily YPD4_2314 IPR000223 Peptidase S26A, signal peptidase I YPD4_2314 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YPD4_2314 IPR019533 Peptidase S26 YPD4_2314 IPR019758 Peptidase S26A, signal peptidase I, conserved site YPD4_2314 IPR019756 Peptidase S26A, signal peptidase I, serine active site YPD4_2314 IPR036286 LexA/Signal peptidase-like superfamily YPD4_2315 IPR005225 Small GTP-binding protein domain YPD4_2315 IPR035647 EF-G domain III/V-like YPD4_2315 IPR000640 Elongation factor EFG, domain V-like YPD4_2315 IPR006297 Elongation factor 4 YPD4_2315 IPR004161 Translation elongation factor EFTu-like, domain 2 YPD4_2315 IPR031157 Tr-type G domain, conserved site YPD4_2315 IPR000795 Transcription factor, GTP-binding domain YPD4_2315 IPR038363 LepA, C-terminal domain superfamily YPD4_2315 IPR013842 GTP-binding protein LepA, C-terminal YPD4_2315 IPR035654 Elongation factor 4, domain IV YPD4_2315 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2317 IPR026268 Protein RseC YPD4_2317 IPR007359 Positive regulator of sigma(E), RseC/MucC YPD4_2318 IPR033436 MucB/RseB, C-terminal YPD4_2318 IPR038484 MucB/RseB, C-terminal domain superfamily YPD4_2318 IPR033434 MucB/RseB, N-terminal YPD4_2318 IPR005588 MucB/RseB YPD4_2319 IPR026279 Sigma-E factor negative regulatory protein RseA YPD4_2319 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily YPD4_2319 IPR005572 Anti sigma-E protein RseA, N-terminal YPD4_2319 IPR005573 Anti sigma-E protein RseA, C-terminal YPD4_2320 IPR039425 RNA polymerase sigma-70 like YPD4_2320 IPR014284 RNA polymerase sigma-70 like domain YPD4_2320 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YPD4_2320 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YPD4_2320 IPR014286 RNA polymerase sigma-70 RpoE type YPD4_2320 IPR013325 RNA polymerase sigma factor, region 2 YPD4_2320 IPR007627 RNA polymerase sigma-70 region 2 YPD4_2320 IPR013324 RNA polymerase sigma factor, region 3/4-like YPD4_2320 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2321 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPD4_2321 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_2321 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPD4_2321 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPD4_2321 IPR005288 L-aspartate oxidase YPD4_2321 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPD4_2322 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2322 IPR007848 Methyltransferase small domain YPD4_2322 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YPD4_2322 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_2323 IPR028621 ATP-dependent RNA helicase SrmB YPD4_2323 IPR001650 Helicase, C-terminal YPD4_2323 IPR014014 RNA helicase, DEAD-box type, Q motif YPD4_2323 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPD4_2323 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2323 IPR011545 DEAD/DEAH box helicase domain YPD4_2323 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_2324 IPR020683 Ankyrin repeat-containing domain YPD4_2324 IPR002110 Ankyrin repeat YPD4_2324 IPR036770 Ankyrin repeat-containing domain superfamily YPD4_2325 IPR029058 Alpha/Beta hydrolase fold YPD4_2326 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPD4_2326 IPR011140 Autonomous glycyl radical cofactor GrcA YPD4_2326 IPR001150 Glycine radical domain YPD4_2327 IPR002043 Uracil-DNA glycosylase family 1 YPD4_2327 IPR036895 Uracil-DNA glycosylase-like domain superfamily YPD4_2327 IPR005122 Uracil-DNA glycosylase-like YPD4_2327 IPR018085 Uracil-DNA glycosylase, active site YPD4_2328 IPR029762 Pyroglutamyl peptidase I, bacterial-type YPD4_2328 IPR033694 Pyroglutamyl peptidase I, Cys active site YPD4_2328 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily YPD4_2328 IPR000816 Peptidase C15, pyroglutamyl peptidase I YPD4_2328 IPR033693 Pyroglutamyl peptidase I, Glu active site YPD4_2328 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPD4_2331 IPR005501 LamB/YcsF/PxpA-like YPD4_2331 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_2332 IPR029000 Cyclophilin-like domain superfamily YPD4_2332 IPR003778 Carboxyltransferase domain, subdomain A and B YPD4_2333 IPR003833 Carboxyltransferase domain, subdomain C and D YPD4_2333 IPR029000 Cyclophilin-like domain superfamily YPD4_2333 IPR010016 KipI family YPD4_2334 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPD4_2334 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily YPD4_2335 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YPD4_2335 IPR000396 Cyclic-AMP phosphodiesterase, class-II YPD4_2335 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPD4_2336 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily YPD4_2336 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPD4_2336 IPR006050 DNA photolyase, N-terminal YPD4_2336 IPR002081 Cryptochrome/DNA photolyase class 1 YPD4_2336 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2336 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily YPD4_2336 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPD4_2337 IPR013560 Domain of unknown function DUF1722 YPD4_2338 IPR004623 Potassium-transporting ATPase A chain YPD4_2339 IPR036412 HAD-like superfamily YPD4_2339 IPR001757 P-type ATPase YPD4_2339 IPR008250 P-type ATPase, A domain superfamily YPD4_2339 IPR023298 P-type ATPase, transmembrane domain superfamily YPD4_2339 IPR018303 P-type ATPase, phosphorylation site YPD4_2339 IPR023299 P-type ATPase, cytoplasmic domain N YPD4_2339 IPR006391 P-type ATPase, B chain, subfamily IA YPD4_2340 IPR003820 Potassium-transporting ATPase C chain YPD4_2341 IPR003018 GAF domain YPD4_2341 IPR029016 GAF-like domain superfamily YPD4_2341 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2341 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2341 IPR005467 Histidine kinase domain YPD4_2341 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2341 IPR038318 KdpD, transmembrane domain superfamily YPD4_2341 IPR025201 Sensor protein KdpD, transmembrane domain YPD4_2341 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2341 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YPD4_2341 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2342 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2342 IPR011006 CheY-like superfamily YPD4_2342 IPR039420 Transcriptional regulatory protein WalR-like YPD4_2342 IPR001789 Signal transduction response regulator, receiver domain YPD4_2342 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_2344 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPD4_2344 IPR016066 Alpha-D-phosphohexomutase, conserved site YPD4_2344 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YPD4_2344 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPD4_2344 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPD4_2344 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPD4_2344 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPD4_2344 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPD4_2345 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily YPD4_2345 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal YPD4_2345 IPR013321 Arc-type ribbon-helix-helix YPD4_2345 IPR010985 Ribbon-helix-helix YPD4_2345 IPR005621 Negative modulator of initiation of replication SeqA YPD4_2345 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YPD4_2346 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria YPD4_2346 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_2346 IPR006879 Carbohydrate deacetylase YdjC-like YPD4_2347 IPR018060 DNA binding HTH domain, AraC-type YPD4_2347 IPR009057 Homeobox-like domain superfamily YPD4_2347 IPR013096 Cupin 2, conserved barrel YPD4_2347 IPR014710 RmlC-like jelly roll fold YPD4_2347 IPR018062 HTH domain AraC-type, conserved site YPD4_2347 IPR020449 Transcription regulator HTH, AraC- type YPD4_2347 IPR011051 RmlC-like cupin domain superfamily YPD4_2348 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit YPD4_2348 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily YPD4_2349 IPR004501 Phosphotransferase system, EIIC component, type 3 YPD4_2349 IPR004796 Phosphotransferase system, cellobiose-type IIC component YPD4_2349 IPR003352 Phosphotransferase system, EIIC YPD4_2350 IPR013012 Phosphotransferase system, EIIB component, type 3 YPD4_2350 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPD4_2350 IPR036095 PTS system IIB component-like superfamily YPD4_2351 IPR003691 Putative fluoride ion transporter CrcB YPD4_2352 IPR003691 Putative fluoride ion transporter CrcB YPD4_2353 IPR003148 Regulator of K+ conductance, N-terminal YPD4_2353 IPR013099 Potassium channel domain YPD4_2353 IPR036291 NAD(P)-binding domain superfamily YPD4_2354 IPR038303 HNS-dependent expression A/B superfamily YPD4_2354 IPR028623 HNS-dependent expression B YPD4_2354 IPR010486 HNS-dependent expression A/B YPD4_2355 IPR004688 Transition metal uptake transporter nickel/cobalt YPD4_2355 IPR011541 Nickel/cobalt transporter, high-affinity YPD4_2356 IPR029020 Ammonium/urea transporter YPD4_2356 IPR004937 Urea transporter YPD4_2357 IPR002669 Urease accessory protein UreD YPD4_2358 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2358 IPR004400 Urease accessory protein UreG YPD4_2358 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPD4_2359 IPR002639 Urease accessory protein UreF YPD4_2359 IPR038277 UreF domain superfamily YPD4_2360 IPR036118 UreE urease accessory, N-terminal domain superfamily YPD4_2360 IPR004029 UreE urease accessory, N-terminal YPD4_2360 IPR007864 Urease accessory protein UreE, C-terminal domain YPD4_2360 IPR012406 Urease accessory protein UreE YPD4_2361 IPR032466 Metal-dependent hydrolase YPD4_2361 IPR006680 Amidohydrolase-related YPD4_2361 IPR029754 Urease nickel binding site YPD4_2361 IPR017951 Urease alpha subunit, C-terminal YPD4_2361 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPD4_2361 IPR011612 Urease alpha-subunit, N-terminal domain YPD4_2361 IPR017950 Urease active site YPD4_2361 IPR005848 Urease, alpha subunit YPD4_2362 IPR002019 Urease, beta subunit YPD4_2362 IPR036461 Urease, beta subunit superfamily YPD4_2363 IPR036463 Urease, gamma subunit superfamily YPD4_2363 IPR012010 Urease, gamma subunit YPD4_2363 IPR002026 Urease, gamma/gamma-beta subunit YPD4_2364 IPR014137 Nickel import ATP-binding protein NikE YPD4_2364 IPR015858 ABC transporter, nickel import, NikE YPD4_2364 IPR017871 ABC transporter, conserved site YPD4_2364 IPR003439 ABC transporter-like YPD4_2364 IPR003593 AAA+ ATPase domain YPD4_2364 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2365 IPR003593 AAA+ ATPase domain YPD4_2365 IPR003439 ABC transporter-like YPD4_2365 IPR017871 ABC transporter, conserved site YPD4_2365 IPR015863 ABC transporter, hemin import, HmuV YPD4_2365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2366 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2366 IPR035906 MetI-like superfamily YPD4_2366 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPD4_2367 IPR035906 MetI-like superfamily YPD4_2367 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2368 IPR011980 Nickel ABC transporter, substrate-binding protein NikA YPD4_2368 IPR000914 Solute-binding protein family 5 domain YPD4_2368 IPR023765 Solute-binding protein family 5, conserved site YPD4_2368 IPR039424 Solute-binding protein family 5 YPD4_2368 IPR030678 Peptide/nickel binding protein, MppA-type YPD4_2370 IPR009587 Protein of unknown function DUF1198 YPD4_2371 IPR018994 Protein of unknown function DUF2002 YPD4_2372 IPR023497 Acid shock protein YPD4_2372 IPR009435 Acid shock YPD4_2373 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPD4_2373 IPR029039 Flavoprotein-like superfamily YPD4_2373 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPD4_2374 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPD4_2374 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPD4_2374 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPD4_2374 IPR013554 Ribonucleotide reductase N-terminal YPD4_2374 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPD4_2374 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPD4_2374 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPD4_2375 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPD4_2375 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPD4_2375 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPD4_2375 IPR013554 Ribonucleotide reductase N-terminal YPD4_2375 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPD4_2375 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPD4_2375 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPD4_2376 IPR033909 Ribonucleotide reductase small subunit YPD4_2376 IPR030475 Ribonucleotide reductase small subunit, acitve site YPD4_2376 IPR000358 Ribonucleotide reductase small subunit family YPD4_2376 IPR026494 Ribonucleoside reductase subunit beta, NrdF YPD4_2376 IPR012348 Ribonucleotide reductase-like YPD4_2376 IPR009078 Ferritin-like superfamily YPD4_2377 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2377 IPR000644 CBS domain YPD4_2377 IPR005892 Glycine betaine transport ATP-binding subunit YPD4_2377 IPR003439 ABC transporter-like YPD4_2377 IPR003593 AAA+ ATPase domain YPD4_2377 IPR017871 ABC transporter, conserved site YPD4_2378 IPR035906 MetI-like superfamily YPD4_2378 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2379 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPD4_2381 IPR012337 Ribonuclease H-like superfamily YPD4_2381 IPR017894 HTH domain, IS21 transposase-type YPD4_2381 IPR036397 Ribonuclease H superfamily YPD4_2381 IPR001584 Integrase, catalytic core YPD4_2381 IPR006120 Resolvase, HTH domain YPD4_2382 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2382 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_2382 IPR001270 ClpA/B family YPD4_2382 IPR003593 AAA+ ATPase domain YPD4_2382 IPR002611 IstB-like ATP-binding protein YPD4_2383 IPR010998 Integrase/recombinase, N-terminal YPD4_2383 IPR025166 Integrase, DNA-binding domain YPD4_2383 IPR038488 Integrase, DNA-binding domain superfamily YPD4_2383 IPR002104 Integrase, catalytic domain YPD4_2383 IPR013762 Integrase-like, catalytic domain superfamily YPD4_2383 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_2384 IPR000073 Alpha/beta hydrolase fold-1 YPD4_2384 IPR029058 Alpha/Beta hydrolase fold YPD4_2385 IPR008254 Flavodoxin/nitric oxide synthase YPD4_2385 IPR001226 Flavodoxin, conserved site YPD4_2385 IPR010086 Flavodoxin, long chain YPD4_2385 IPR029039 Flavoprotein-like superfamily YPD4_2386 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2386 IPR002481 Ferric-uptake regulator YPD4_2386 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2387 IPR014756 Immunoglobulin E-set YPD4_2387 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily YPD4_2387 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal YPD4_2387 IPR012291 CBM2, carbohydrate-binding domain superfamily YPD4_2387 IPR017853 Glycoside hydrolase superfamily YPD4_2387 IPR015883 Glycoside hydrolase family 20, catalytic domain YPD4_2387 IPR025705 Beta-hexosaminidase YPD4_2387 IPR004867 Chitobiase C-terminal domain YPD4_2387 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain YPD4_2387 IPR029018 Beta-hexosaminidase-like, domain 2 YPD4_2387 IPR013783 Immunoglobulin-like fold YPD4_2388 IPR014756 Immunoglobulin E-set YPD4_2388 IPR013783 Immunoglobulin-like fold YPD4_2388 IPR017853 Glycoside hydrolase superfamily YPD4_2388 IPR029018 Beta-hexosaminidase-like, domain 2 YPD4_2388 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal YPD4_2388 IPR015883 Glycoside hydrolase family 20, catalytic domain YPD4_2388 IPR025705 Beta-hexosaminidase YPD4_2388 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily YPD4_2388 IPR012291 CBM2, carbohydrate-binding domain superfamily YPD4_2388 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain YPD4_2388 IPR004867 Chitobiase C-terminal domain YPD4_2389 IPR005318 Outer membrane porin, bacterial YPD4_2389 IPR023614 Porin domain superfamily YPD4_2390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2390 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily YPD4_2390 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal YPD4_2390 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily YPD4_2390 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YPD4_2390 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPD4_2390 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPD4_2390 IPR004514 Glutamine-tRNA synthetase YPD4_2390 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_2390 IPR022861 Glutamine-tRNA ligase, bacterial YPD4_2391 IPR036515 Transposase IS200-like superfamily YPD4_2391 IPR002686 Transposase IS200-like YPD4_2392 IPR003352 Phosphotransferase system, EIIC YPD4_2392 IPR001996 Phosphotransferase system, IIB component, type 1 YPD4_2392 IPR013013 Phosphotransferase system, EIIC component, type 1 YPD4_2392 IPR011055 Duplicated hybrid motif YPD4_2392 IPR036878 Glucose permease domain IIB YPD4_2392 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPD4_2392 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPD4_2392 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPD4_2393 IPR011055 Duplicated hybrid motif YPD4_2393 IPR036878 Glucose permease domain IIB YPD4_2393 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPD4_2393 IPR003352 Phosphotransferase system, EIIC YPD4_2393 IPR013013 Phosphotransferase system, EIIC component, type 1 YPD4_2393 IPR001996 Phosphotransferase system, IIB component, type 1 YPD4_2393 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPD4_2393 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPD4_2394 IPR037171 NagB/RpiA transferase-like YPD4_2394 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YPD4_2394 IPR004547 Glucosamine-6-phosphate isomerase YPD4_2394 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YPD4_2395 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPD4_2395 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPD4_2395 IPR006680 Amidohydrolase-related YPD4_2395 IPR032466 Metal-dependent hydrolase YPD4_2396 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2396 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2396 IPR000600 ROK family YPD4_2396 IPR000835 MarR-type HTH domain YPD4_2397 IPR036412 HAD-like superfamily YPD4_2397 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPD4_2397 IPR023214 HAD superfamily YPD4_2398 IPR001962 Asparagine synthase YPD4_2398 IPR006426 Asparagine synthase, glutamine-hydrolyzing YPD4_2398 IPR017932 Glutamine amidotransferase type 2 domain YPD4_2398 IPR033738 Asparagine synthase, N-terminal domain YPD4_2398 IPR029055 Nucleophile aminohydrolases, N-terminal YPD4_2398 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2399 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPD4_2399 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_2399 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPD4_2399 IPR002938 FAD-binding domain YPD4_2400 IPR002792 TRAM domain YPD4_2400 IPR023404 Radical SAM, alpha/beta horseshoe YPD4_2400 IPR007197 Radical SAM YPD4_2400 IPR038135 Methylthiotransferase, N-terminal domain superfamily YPD4_2400 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB YPD4_2400 IPR006638 Elp3/MiaB/NifB YPD4_2400 IPR005839 Methylthiotransferase YPD4_2400 IPR020612 Methylthiotransferase, conserved site YPD4_2400 IPR013848 Methylthiotransferase, N-terminal YPD4_2401 IPR003714 PhoH-like protein YPD4_2401 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2402 IPR002036 Endoribonuclease YbeY YPD4_2402 IPR023091 Metalloprotease catalytic domain superfamily, predicted YPD4_2402 IPR020549 Endoribonuclease YbeY, conserved site YPD4_2403 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_2403 IPR005170 Transporter-associated domain YPD4_2403 IPR000644 CBS domain YPD4_2403 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_2404 IPR036526 Carbon-nitrogen hydrolase superfamily YPD4_2404 IPR003010 Carbon-nitrogen hydrolase YPD4_2404 IPR004563 Apolipoprotein N-acyltransferase YPD4_2405 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_2406 IPR035906 MetI-like superfamily YPD4_2406 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_2406 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ YPD4_2406 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2407 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM YPD4_2407 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_2407 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2407 IPR035906 MetI-like superfamily YPD4_2408 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPD4_2408 IPR017871 ABC transporter, conserved site YPD4_2408 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2408 IPR003593 AAA+ ATPase domain YPD4_2408 IPR003439 ABC transporter-like YPD4_2409 IPR009912 Zinc-ribbon containing domain YPD4_2410 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPD4_2410 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_2410 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPD4_2410 IPR002302 Leucine-tRNA ligase YPD4_2410 IPR025709 Leucyl-tRNA synthetase, editing domain YPD4_2410 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPD4_2410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2410 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPD4_2411 IPR007485 LPS-assembly lipoprotein LptE YPD4_2412 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPD4_2412 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2412 IPR032780 DNA polymerase III subunit delta, C-terminal YPD4_2412 IPR010372 DNA polymerase III delta, N-terminal YPD4_2412 IPR005790 DNA polymerase III, delta subunit YPD4_2413 IPR004821 Cytidyltransferase-like domain YPD4_2413 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase YPD4_2413 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2414 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPD4_2415 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_2415 IPR029028 Alpha/beta knot methyltransferases YPD4_2415 IPR003742 RNA methyltransferase RlmH YPD4_2416 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPD4_2416 IPR005311 Penicillin-binding protein, dimerisation domain YPD4_2416 IPR012338 Beta-lactamase/transpeptidase-like YPD4_2416 IPR017790 Penicillin-binding protein 2 YPD4_2416 IPR001460 Penicillin-binding protein, transpeptidase YPD4_2417 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPD4_2417 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB YPD4_2417 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPD4_2418 IPR034718 Endolytic peptidoglycan transglycosylase RlpA YPD4_2418 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPD4_2418 IPR036908 RlpA-like domain superfamily YPD4_2418 IPR012997 Rare lipoprotein A YPD4_2418 IPR007730 Sporulation-like domain YPD4_2418 IPR036680 Sporulation-like domain superfamily YPD4_2419 IPR036680 Sporulation-like domain superfamily YPD4_2419 IPR034718 Endolytic peptidoglycan transglycosylase RlpA YPD4_2419 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPD4_2419 IPR036908 RlpA-like domain superfamily YPD4_2419 IPR012997 Rare lipoprotein A YPD4_2419 IPR007730 Sporulation-like domain YPD4_2420 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPD4_2420 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPD4_2420 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPD4_2420 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPD4_2420 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPD4_2420 IPR012338 Beta-lactamase/transpeptidase-like YPD4_2421 IPR000544 Octanoyltransferase YPD4_2421 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPD4_2421 IPR020605 Octanoyltransferase, conserved site YPD4_2422 IPR007197 Radical SAM YPD4_2422 IPR013785 Aldolase-type TIM barrel YPD4_2422 IPR031691 Lipoyl synthase, N-terminal YPD4_2422 IPR006638 Elp3/MiaB/NifB YPD4_2422 IPR003698 Lipoyl synthase YPD4_2423 IPR003691 Putative fluoride ion transporter CrcB YPD4_2424 IPR019844 Cold-shock (CSD) domain YPD4_2424 IPR011129 Cold shock domain YPD4_2424 IPR002059 Cold-shock protein, DNA-binding YPD4_2424 IPR012340 Nucleic acid-binding, OB-fold YPD4_2424 IPR012156 Cold shock, CspA YPD4_2425 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_2425 IPR000792 Transcription regulator LuxR, C-terminal YPD4_2427 IPR003593 AAA+ ATPase domain YPD4_2427 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_2427 IPR011527 ABC transporter type 1, transmembrane domain YPD4_2427 IPR017871 ABC transporter, conserved site YPD4_2427 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2427 IPR039421 Type I protein exporter YPD4_2427 IPR003439 ABC transporter-like YPD4_2429 IPR014710 RmlC-like jelly roll fold YPD4_2429 IPR011051 RmlC-like cupin domain superfamily YPD4_2429 IPR021120 KduI/IolB isomerase YPD4_2429 IPR024203 5-deoxy-glucuronate isomerase, IolB YPD4_2429 IPR023770 5-deoxy-glucuronate isomerase, Bacilli YPD4_2430 IPR036237 Xylose isomerase-like superfamily YPD4_2430 IPR013022 Xylose isomerase-like, TIM barrel domain YPD4_2430 IPR030823 IolE/MocC family YPD4_2431 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_2431 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes YPD4_2431 IPR030830 5-Dehydro-2-deoxygluconokinase YPD4_2431 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily YPD4_2431 IPR011611 Carbohydrate kinase PfkB YPD4_2431 IPR029056 Ribokinase-like YPD4_2432 IPR004104 Oxidoreductase, C-terminal YPD4_2432 IPR030827 Inositol 2-dehydrogenase YPD4_2432 IPR036291 NAD(P)-binding domain superfamily YPD4_2432 IPR000683 Oxidoreductase, N-terminal YPD4_2433 IPR001851 ABC transporter, permease YPD4_2434 IPR003593 AAA+ ATPase domain YPD4_2434 IPR003439 ABC transporter-like YPD4_2434 IPR015861 ABC transporter, ribose import, RbsA YPD4_2434 IPR017871 ABC transporter, conserved site YPD4_2434 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2435 IPR025997 Periplasmic binding protein YPD4_2435 IPR028082 Periplasmic binding protein-like I YPD4_2436 IPR000683 Oxidoreductase, N-terminal YPD4_2436 IPR004104 Oxidoreductase, C-terminal YPD4_2436 IPR030827 Inositol 2-dehydrogenase YPD4_2436 IPR036291 NAD(P)-binding domain superfamily YPD4_2437 IPR000683 Oxidoreductase, N-terminal YPD4_2437 IPR030827 Inositol 2-dehydrogenase YPD4_2437 IPR004104 Oxidoreductase, C-terminal YPD4_2437 IPR036291 NAD(P)-binding domain superfamily YPD4_2438 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPD4_2438 IPR012000 Thiamine pyrophosphate enzyme, central domain YPD4_2438 IPR029061 Thiamin diphosphate-binding fold YPD4_2438 IPR000399 TPP-binding enzyme, conserved site YPD4_2438 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPD4_2438 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase YPD4_2438 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPD4_2438 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes YPD4_2439 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_2439 IPR015590 Aldehyde dehydrogenase domain YPD4_2439 IPR010061 Methylmalonate-semialdehyde dehydrogenase YPD4_2439 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_2439 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_2439 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_2442 IPR021868 Alpha-2-macroglobulin MG3 domain YPD4_2442 IPR001599 Alpha-2-macroglobulin YPD4_2442 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain YPD4_2442 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPD4_2442 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain YPD4_2442 IPR011625 Alpha-2-macroglobulin, bait region domain YPD4_2442 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain YPD4_2442 IPR002890 Macroglobulin domain YPD4_2443 IPR023346 Lysozyme-like domain superfamily YPD4_2443 IPR001460 Penicillin-binding protein, transpeptidase YPD4_2443 IPR036950 Penicillin binding protein transglycosylase domain YPD4_2443 IPR009647 Penicillin-binding, C-terminal YPD4_2443 IPR011815 Penicillin-binding protein 1C YPD4_2443 IPR012338 Beta-lactamase/transpeptidase-like YPD4_2443 IPR001264 Glycosyl transferase, family 51 YPD4_2444 IPR001207 Transposase, mutator type YPD4_2445 IPR016152 Phosphotransferase/anion transporter YPD4_2445 IPR002178 PTS EIIA type-2 domain YPD4_2446 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPD4_2446 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_2446 IPR028082 Periplasmic binding protein-like I YPD4_2446 IPR000843 LacI-type HTH domain YPD4_2447 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2447 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YPD4_2447 IPR042113 Phosphate acetyltransferase, domain 1 YPD4_2447 IPR042112 Phosphate acetyltransferase, domain 2 YPD4_2447 IPR010766 DRTGG YPD4_2447 IPR002505 Phosphate acetyl/butaryl transferase YPD4_2447 IPR016475 Phosphate acetyltransferase, bacteria YPD4_2447 IPR004614 Phosphate acetyltransferase YPD4_2448 IPR023865 Aliphatic acid kinase, short-chain, conserved site YPD4_2448 IPR000890 Aliphatic acid kinase, short-chain YPD4_2448 IPR004372 Acetate/propionate kinase YPD4_2449 IPR007334 Uncharacterised protein family UPF0208 YPD4_2450 IPR023145 YfbU, helix-hairpin domain superfamily YPD4_2450 IPR023146 YfbU, alpha-helical bundle domain superfamily YPD4_2450 IPR005587 Uncharacterised protein family UPF0304, YfbU YPD4_2451 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_2451 IPR006439 HAD hydrolase, subfamily IA YPD4_2451 IPR036412 HAD-like superfamily YPD4_2451 IPR023214 HAD superfamily YPD4_2451 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPD4_2452 IPR006037 Regulator of K+ conductance, C-terminal YPD4_2452 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPD4_2452 IPR004680 Citrate transporter-like domain YPD4_2452 IPR031312 Sodium/sulphate symporter, conserved site YPD4_2453 IPR039356 Metal-dependent nucleoside 5'-monophosphatase YPD4_2453 IPR022971 5'-deoxynucleotidase YfbR YPD4_2453 IPR003607 HD/PDEase domain YPD4_2454 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2454 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2454 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2454 IPR004839 Aminotransferase, class I/classII YPD4_2455 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2455 IPR000847 Transcription regulator HTH, LysR YPD4_2455 IPR005119 LysR, substrate-binding YPD4_2455 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2456 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily YPD4_2456 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YPD4_2456 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YPD4_2457 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YPD4_2457 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YPD4_2458 IPR029014 [NiFe]-hydrogenase, large subunit YPD4_2458 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YPD4_2458 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YPD4_2458 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily YPD4_2458 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily YPD4_2458 IPR001135 NADH-quinone oxidoreductase, subunit D YPD4_2458 IPR023062 NADH dehydrogenase, subunit CD YPD4_2458 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YPD4_2458 IPR010218 NADH dehydrogenase, subunit C YPD4_2459 IPR036249 Thioredoxin-like superfamily YPD4_2459 IPR042128 NuoE domain YPD4_2459 IPR002023 NADH-quinone oxidoreductase subunit E-like YPD4_2459 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal YPD4_2460 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YPD4_2460 IPR011537 NADH ubiquinone oxidoreductase, F subunit YPD4_2460 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPD4_2460 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPD4_2460 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain YPD4_2460 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily YPD4_2460 IPR019554 Soluble ligand binding domain YPD4_2461 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YPD4_2461 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YPD4_2461 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YPD4_2461 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_2461 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_2461 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_2461 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPD4_2461 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_2461 IPR006656 Molybdopterin oxidoreductase YPD4_2462 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YPD4_2462 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YPD4_2463 IPR010226 NADH-quinone oxidoreductase, chain I YPD4_2463 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_2463 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_2464 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ YPD4_2464 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YPD4_2465 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YPD4_2465 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like YPD4_2466 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YPD4_2466 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPD4_2466 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YPD4_2466 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YPD4_2467 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPD4_2467 IPR003918 NADH:ubiquinone oxidoreductase YPD4_2467 IPR010227 NADH-quinone oxidoreductase, chain M/4 YPD4_2468 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPD4_2468 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YPD4_2470 IPR004375 YhcH/YjgK/YiaL family YPD4_2470 IPR037012 YhcH/YjgK/YiaL superfamily YPD4_2471 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPD4_2471 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2471 IPR031322 Shikimate kinase/gluconokinase YPD4_2472 IPR036291 NAD(P)-binding domain superfamily YPD4_2472 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_2472 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_2474 IPR000843 LacI-type HTH domain YPD4_2474 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_2474 IPR028082 Periplasmic binding protein-like I YPD4_2475 IPR036291 NAD(P)-binding domain superfamily YPD4_2475 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPD4_2475 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPD4_2476 IPR011701 Major facilitator superfamily YPD4_2476 IPR020846 Major facilitator superfamily domain YPD4_2476 IPR036259 MFS transporter superfamily YPD4_2477 IPR010371 Uncharacterised protein family UPF0303 YPD4_2477 IPR038084 GlcG-like domain superfamily YPD4_2477 IPR005624 Haem-degrading YPD4_2478 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPD4_2478 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPD4_2478 IPR004786 6-phosphogluconate dehydratase YPD4_2478 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPD4_2478 IPR037237 IlvD/EDD, N-terminal domain YPD4_2479 IPR010279 Inner membrane protein YqjD/ElaB YPD4_2481 IPR004561 Isochorismate synthase YPD4_2481 IPR015890 Chorismate-utilising enzyme, C-terminal YPD4_2481 IPR005801 ADC synthase YPD4_2481 IPR034681 Isochorismate synthase MenF YPD4_2482 IPR032264 Menaquinone biosynthesis protein MenD, middle domain YPD4_2482 IPR029061 Thiamin diphosphate-binding fold YPD4_2482 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPD4_2482 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPD4_2482 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase YPD4_2483 IPR000073 Alpha/beta hydrolase fold-1 YPD4_2483 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YPD4_2483 IPR029058 Alpha/Beta hydrolase fold YPD4_2484 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB YPD4_2484 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPD4_2484 IPR014748 Enoyl-CoA hydratase, C-terminal YPD4_2484 IPR001753 Enoyl-CoA hydratase/isomerase YPD4_2484 IPR029045 ClpP/crotonase-like domain superfamily YPD4_2485 IPR010196 o-Succinylbenzoate synthase, MenC type1 YPD4_2485 IPR036849 Enolase-like, C-terminal domain superfamily YPD4_2485 IPR029017 Enolase-like, N-terminal YPD4_2485 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPD4_2485 IPR029065 Enolase C-terminal domain-like YPD4_2486 IPR025110 AMP-binding enzyme, C-terminal domain YPD4_2486 IPR000873 AMP-dependent synthetase/ligase YPD4_2486 IPR042099 AMP-dependent synthetase-like superfamily YPD4_2486 IPR020845 AMP-binding, conserved site YPD4_2486 IPR010192 2-succinylbenzoate--CoA ligase YPD4_2487 IPR017459 Glycosyl transferase family 3, N-terminal domain YPD4_2487 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPD4_2487 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPD4_2488 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2488 IPR010286 METTL16/RlmF family YPD4_2488 IPR016909 Ribosomal RNA large subunit methyltransferase F YPD4_2489 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2489 IPR002611 IstB-like ATP-binding protein YPD4_2489 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_2489 IPR001270 ClpA/B family YPD4_2489 IPR003593 AAA+ ATPase domain YPD4_2490 IPR006120 Resolvase, HTH domain YPD4_2490 IPR036397 Ribonuclease H superfamily YPD4_2490 IPR001584 Integrase, catalytic core YPD4_2490 IPR017894 HTH domain, IS21 transposase-type YPD4_2490 IPR012337 Ribonuclease H-like superfamily YPD4_2491 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2491 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2491 IPR000847 Transcription regulator HTH, LysR YPD4_2491 IPR005119 LysR, substrate-binding YPD4_2492 IPR023210 NADP-dependent oxidoreductase domain YPD4_2492 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_2492 IPR020471 Aldo/keto reductase YPD4_2493 IPR020471 Aldo/keto reductase YPD4_2493 IPR018170 Aldo/keto reductase, conserved site YPD4_2493 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_2493 IPR023210 NADP-dependent oxidoreductase domain YPD4_2498 IPR001207 Transposase, mutator type YPD4_2499 IPR003347 JmjC domain YPD4_2499 IPR039994 JmjC domain-containing YPD4_2501 IPR004899 Pertactin, central region YPD4_2501 IPR011050 Pectin lyase fold/virulence factor YPD4_2501 IPR024973 ESPR domain YPD4_2501 IPR003991 Pertactin virulence factor family YPD4_2501 IPR030930 Adhesin of bacterial autotransporter system YPD4_2501 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_2501 IPR006315 Outer membrane autotransporter barrel YPD4_2501 IPR036709 Autotransporter beta-domain superfamily YPD4_2501 IPR005546 Autotransporter beta-domain YPD4_2502 IPR008514 Type VI secretion system effector, Hcp YPD4_2502 IPR036624 Hcp1-like superfamily YPD4_2506 IPR009647 Penicillin-binding, C-terminal YPD4_2506 IPR011815 Penicillin-binding protein 1C YPD4_2506 IPR023346 Lysozyme-like domain superfamily YPD4_2506 IPR001264 Glycosyl transferase, family 51 YPD4_2506 IPR012338 Beta-lactamase/transpeptidase-like YPD4_2506 IPR036950 Penicillin binding protein transglycosylase domain YPD4_2506 IPR001460 Penicillin-binding protein, transpeptidase YPD4_2507 IPR001207 Transposase, mutator type YPD4_2508 IPR004703 Phosphotransferase system, sugar-specific permease component YPD4_2509 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_2509 IPR024195 NUDIX hydrolase, YfcD, predicted YPD4_2509 IPR000086 NUDIX hydrolase domain YPD4_2510 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type YPD4_2510 IPR029052 Metallo-dependent phosphatase-like YPD4_2510 IPR000979 Phosphodiesterase MJ0936/Vps29 YPD4_2510 IPR020935 Phosphodiesterase YfcE, conserved site YPD4_2510 IPR041802 YfcE-like, metallophosphatase domain YPD4_2512 IPR010099 Epimerase family protein SDR39U1 YPD4_2512 IPR013549 Domain of unknown function DUF1731 YPD4_2512 IPR036291 NAD(P)-binding domain superfamily YPD4_2512 IPR001509 NAD-dependent epimerase/dehydratase YPD4_2513 IPR003593 AAA+ ATPase domain YPD4_2513 IPR003439 ABC transporter-like YPD4_2513 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPD4_2513 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2513 IPR017871 ABC transporter, conserved site YPD4_2514 IPR035906 MetI-like superfamily YPD4_2514 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2514 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_2515 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_2515 IPR030199 Histidine transport system permease protein HisQ YPD4_2515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2515 IPR035906 MetI-like superfamily YPD4_2516 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPD4_2516 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_2516 IPR018313 Solute-binding protein family 3, conserved site YPD4_2517 IPR036551 Flavin prenyltransferase-like YPD4_2517 IPR003382 Flavoprotein YPD4_2517 IPR004507 Flavin prenyltransferase UbiX-like YPD4_2518 IPR035584 Amidophosphoribosyltransferase, N-terminal YPD4_2518 IPR005854 Amidophosphoribosyltransferase YPD4_2518 IPR029057 Phosphoribosyltransferase-like YPD4_2518 IPR000836 Phosphoribosyltransferase domain YPD4_2518 IPR029055 Nucleophile aminohydrolases, N-terminal YPD4_2518 IPR017932 Glutamine amidotransferase type 2 domain YPD4_2519 IPR003825 Colicin V production, CvpA YPD4_2520 IPR036680 Sporulation-like domain superfamily YPD4_2520 IPR007730 Sporulation-like domain YPD4_2520 IPR032898 Cell division protein DedD YPD4_2521 IPR018109 Folylpolyglutamate synthetase, conserved site YPD4_2521 IPR036565 Mur-like, catalytic domain superfamily YPD4_2521 IPR013221 Mur ligase, central YPD4_2521 IPR036615 Mur ligase, C-terminal domain superfamily YPD4_2521 IPR004101 Mur ligase, C-terminal YPD4_2521 IPR001645 Folylpolyglutamate synthetase YPD4_2522 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal YPD4_2522 IPR034733 Acetyl-CoA carboxylase YPD4_2522 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YPD4_2522 IPR041010 Acetyl-coA carboxylase zinc finger domain YPD4_2522 IPR029045 ClpP/crotonase-like domain superfamily YPD4_2523 IPR032816 SNARE associated Golgi protein YPD4_2523 IPR032818 DedA family YPD4_2524 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_2524 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YPD4_2524 IPR020095 Pseudouridine synthase I, TruA, C-terminal YPD4_2524 IPR001406 Pseudouridine synthase I, TruA YPD4_2525 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPD4_2525 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPD4_2525 IPR036291 NAD(P)-binding domain superfamily YPD4_2526 IPR038251 PdxB, dimerisation domain superfamily YPD4_2526 IPR036291 NAD(P)-binding domain superfamily YPD4_2526 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPD4_2526 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPD4_2526 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPD4_2526 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPD4_2526 IPR020921 Erythronate-4-phosphate dehydrogenase YPD4_2526 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YPD4_2528 IPR000620 EamA domain YPD4_2529 IPR023597 Flagellar regulator Flk YPD4_2530 IPR000259 Fimbrial-type adhesion domain YPD4_2530 IPR036937 Fimbrial-type adhesion domain superfamily YPD4_2530 IPR008966 Adhesion domain superfamily YPD4_2531 IPR001920 Asp/Glu racemase YPD4_2531 IPR015942 Asp/Glu/hydantoin racemase YPD4_2531 IPR018187 Asp/Glu racemase, active site 1 YPD4_2531 IPR033134 Asp/Glu racemase, active site 2 YPD4_2531 IPR004380 Aspartate racemase YPD4_2532 IPR000794 Beta-ketoacyl synthase YPD4_2532 IPR016039 Thiolase-like YPD4_2532 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_2532 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_2532 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_2532 IPR018201 Beta-ketoacyl synthase, active site YPD4_2533 IPR016039 Thiolase-like YPD4_2533 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPD4_2533 IPR014030 Beta-ketoacyl synthase, N-terminal YPD4_2533 IPR014031 Beta-ketoacyl synthase, C-terminal YPD4_2533 IPR018201 Beta-ketoacyl synthase, active site YPD4_2533 IPR000794 Beta-ketoacyl synthase YPD4_2534 IPR006076 FAD dependent oxidoreductase YPD4_2534 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YPD4_2534 IPR008471 MnmC-like methyltransferase YPD4_2534 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2534 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YPD4_2534 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_2535 IPR007411 Elongation factor P hydroxylase YPD4_2536 IPR002781 Transmembrane protein TauE-like YPD4_2537 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YPD4_2537 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPD4_2538 IPR000453 Chorismate synthase YPD4_2538 IPR035904 Chorismate synthase AroC superfamily YPD4_2538 IPR020541 Chorismate synthase, conserved site YPD4_2539 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_2539 IPR004556 Methyltransferase HemK-like YPD4_2539 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YPD4_2539 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2539 IPR007848 Methyltransferase small domain YPD4_2540 IPR002625 Smr domain YPD4_2540 IPR022990 Uncharacterised protein family UPF0115 YPD4_2540 IPR036063 Smr domain superfamily YPD4_2541 IPR004449 Phosphohistidine phosphatase SixA YPD4_2541 IPR013078 Histidine phosphatase superfamily, clade-1 YPD4_2541 IPR029033 Histidine phosphatase superfamily YPD4_2542 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_2542 IPR036291 NAD(P)-binding domain superfamily YPD4_2542 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPD4_2542 IPR012802 Fatty oxidation complex, alpha subunit FadJ YPD4_2542 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPD4_2542 IPR001753 Enoyl-CoA hydratase/isomerase YPD4_2542 IPR029045 ClpP/crotonase-like domain superfamily YPD4_2542 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPD4_2543 IPR020613 Thiolase, conserved site YPD4_2543 IPR016039 Thiolase-like YPD4_2543 IPR020615 Thiolase, acyl-enzyme intermediate active site YPD4_2543 IPR020610 Thiolase, active site YPD4_2543 IPR020617 Thiolase, C-terminal YPD4_2543 IPR020616 Thiolase, N-terminal YPD4_2543 IPR002155 Thiolase YPD4_2543 IPR012806 Acetyl-CoA C-acyltransferase FadI YPD4_2544 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPD4_2544 IPR042117 OMPP1/FadL/TodX superfamily YPD4_2545 IPR007428 MlaA lipoprotein YPD4_2546 IPR005616 CcmH/CycL/Ccl2/NrfF family YPD4_2546 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YPD4_2546 IPR013026 Tetratricopeptide repeat-containing domain YPD4_2546 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_2546 IPR019734 Tetratricopeptide repeat YPD4_2547 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YPD4_2547 IPR019734 Tetratricopeptide repeat YPD4_2547 IPR005616 CcmH/CycL/Ccl2/NrfF family YPD4_2547 IPR013026 Tetratricopeptide repeat-containing domain YPD4_2547 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_2548 IPR013766 Thioredoxin domain YPD4_2548 IPR013740 Redoxin YPD4_2548 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YPD4_2548 IPR017937 Thioredoxin, conserved site YPD4_2548 IPR036249 Thioredoxin-like superfamily YPD4_2549 IPR003568 Cytochrome c-type biogenesis protein CcmF YPD4_2549 IPR003567 Cytochrome c-type biogenesis protein YPD4_2549 IPR002541 Cytochrome c assembly protein YPD4_2549 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YPD4_2550 IPR004329 CcmE/CycJ protein YPD4_2550 IPR036127 CcmE-like superfamily YPD4_2551 IPR007078 Haem exporter protein D (CcmD) YPD4_2552 IPR002541 Cytochrome c assembly protein YPD4_2552 IPR003557 Cytochrome c-type biogenesis protein CcmC YPD4_2553 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPD4_2553 IPR003544 Cytochrome c-type biogenesis protein CcmB YPD4_2554 IPR017871 ABC transporter, conserved site YPD4_2554 IPR005895 ABC transporter, haem export, CcmA YPD4_2554 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2554 IPR003593 AAA+ ATPase domain YPD4_2554 IPR003439 ABC transporter-like YPD4_2556 IPR023353 LemA-like domain superfamily YPD4_2556 IPR007156 LemA YPD4_2558 IPR013987 PhnA protein, N-terminal YPD4_2558 IPR013988 PhnA protein, C-terminal YPD4_2558 IPR004624 PhnA protein YPD4_2563 IPR006531 Gp5 N-terminal YPD4_2563 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPD4_2563 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPD4_2563 IPR037026 Vgr protein, OB-fold domain superfamily YPD4_2566 IPR003593 AAA+ ATPase domain YPD4_2566 IPR001270 ClpA/B family YPD4_2566 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_2566 IPR002611 IstB-like ATP-binding protein YPD4_2566 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2567 IPR036397 Ribonuclease H superfamily YPD4_2567 IPR012337 Ribonuclease H-like superfamily YPD4_2567 IPR006120 Resolvase, HTH domain YPD4_2567 IPR017894 HTH domain, IS21 transposase-type YPD4_2567 IPR001584 Integrase, catalytic core YPD4_2575 IPR018030 Fimbrial membrane usher, conserved site YPD4_2575 IPR037224 PapC, N-terminal domain superfamily YPD4_2575 IPR000015 Outer membrane usher protein YPD4_2575 IPR025885 PapC, N-terminal domain YPD4_2575 IPR025949 PapC-like, C-terminal domain YPD4_2575 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_2576 IPR001207 Transposase, mutator type YPD4_2577 IPR018030 Fimbrial membrane usher, conserved site YPD4_2577 IPR000015 Outer membrane usher protein YPD4_2577 IPR025885 PapC, N-terminal domain YPD4_2577 IPR025949 PapC-like, C-terminal domain YPD4_2577 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_2577 IPR037224 PapC, N-terminal domain superfamily YPD4_2578 IPR018046 Pili assembly chaperone, conserved site YPD4_2578 IPR013783 Immunoglobulin-like fold YPD4_2578 IPR008962 PapD-like superfamily YPD4_2578 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_2578 IPR001829 Pili assembly chaperone, bacterial YPD4_2578 IPR016148 Pili assembly chaperone, C-terminal YPD4_2578 IPR016147 Pili assembly chaperone, N-terminal YPD4_2579 IPR036937 Fimbrial-type adhesion domain superfamily YPD4_2579 IPR008966 Adhesion domain superfamily YPD4_2579 IPR039458 FimA-like YPD4_2580 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2580 IPR041546 ClpA/ClpB, AAA lid domain YPD4_2580 IPR018368 ClpA/B, conserved site 1 YPD4_2580 IPR003593 AAA+ ATPase domain YPD4_2580 IPR001270 ClpA/B family YPD4_2580 IPR003959 ATPase, AAA-type, core YPD4_2580 IPR028299 ClpA/B, conserved site 2 YPD4_2580 IPR017729 Type VI secretion system, ATPase ClpV1 YPD4_2580 IPR019489 Clp ATPase, C-terminal YPD4_2580 IPR036628 Clp, N-terminal domain superfamily YPD4_2580 IPR004176 Clp, N-terminal YPD4_2590 IPR011757 Lytic transglycosylase MltB YPD4_2590 IPR023346 Lysozyme-like domain superfamily YPD4_2590 IPR031304 Transglycosylase SLT domain 2 YPD4_2591 IPR026045 Ferric binding protein YPD4_2591 IPR006061 Solute-binding family 1, conserved site YPD4_2592 IPR035906 MetI-like superfamily YPD4_2592 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2593 IPR003439 ABC transporter-like YPD4_2593 IPR003593 AAA+ ATPase domain YPD4_2593 IPR015853 ABC transporter, ferric cation import, FbpC YPD4_2593 IPR017871 ABC transporter, conserved site YPD4_2593 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_2593 IPR030287 Fe(3+) ions import ATP-binding protein FbpC YPD4_2593 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2596 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_2596 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPD4_2596 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPD4_2596 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPD4_2596 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_2596 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_2596 IPR006656 Molybdopterin oxidoreductase YPD4_2597 IPR014297 Dimethylsulphoxide reductase, chain B YPD4_2597 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_2597 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_2598 IPR007059 DMSO reductase anchor subunit (DmsC) YPD4_2599 IPR036411 TorD-like superfamily YPD4_2599 IPR020945 DMSO/Nitrate reductase chaperone YPD4_2599 IPR026269 Tat proofreading chaperone DmsD-type YPD4_2599 IPR028611 Tat proofreading chaperone DmsD YPD4_2601 IPR008517 Protein of unknown function DUF799 YPD4_2603 IPR005534 Curli production assembly/transport component CsgG YPD4_2605 IPR016174 Di-haem cytochrome, transmembrane YPD4_2605 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPD4_2606 IPR004839 Aminotransferase, class I/classII YPD4_2606 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2606 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2606 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2607 IPR027443 Isopenicillin N synthase-like YPD4_2607 IPR010856 Protein of unknown function DUF1479 YPD4_2608 IPR003836 Glucokinase YPD4_2610 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2610 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2610 IPR000847 Transcription regulator HTH, LysR YPD4_2610 IPR005119 LysR, substrate-binding YPD4_2611 IPR036812 NADP-dependent oxidoreductase domain superfamily YPD4_2611 IPR023210 NADP-dependent oxidoreductase domain YPD4_2613 IPR001046 NRAMP family YPD4_2614 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPD4_2614 IPR002668 Concentrative nucleoside transporter N-terminal domain YPD4_2614 IPR011657 Concentrative nucleoside transporter C-terminal domain YPD4_2614 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPD4_2614 IPR008276 Concentrative nucleoside transporter YPD4_2615 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YPD4_2615 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_2615 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPD4_2615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2615 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPD4_2615 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YPD4_2615 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YPD4_2615 IPR033910 Glutamyl-tRNA synthetase YPD4_2616 IPR036515 Transposase IS200-like superfamily YPD4_2616 IPR002686 Transposase IS200-like YPD4_2619 IPR033136 NAD-dependent DNA ligase, conserved site YPD4_2619 IPR041663 DisA/LigA, helix-hairpin-helix motif YPD4_2619 IPR013839 NAD-dependent DNA ligase, adenylation YPD4_2619 IPR036420 BRCT domain superfamily YPD4_2619 IPR013840 NAD-dependent DNA ligase, N-terminal YPD4_2619 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPD4_2619 IPR012340 Nucleic acid-binding, OB-fold YPD4_2619 IPR001357 BRCT domain YPD4_2619 IPR010994 RuvA domain 2-like YPD4_2619 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YPD4_2619 IPR018239 NAD-dependent DNA ligase, active site YPD4_2619 IPR001679 NAD-dependent DNA ligase YPD4_2619 IPR004150 NAD-dependent DNA ligase, OB-fold YPD4_2620 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily YPD4_2620 IPR007449 ZipA, C-terminal FtsZ-binding domain YPD4_2620 IPR011919 Cell division protein ZipA YPD4_2621 IPR022985 Sulfate transporter CysZ YPD4_2622 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPD4_2622 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_2622 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_2622 IPR005856 Cysteine synthase YPD4_2622 IPR005859 Cysteine synthase CysK YPD4_2623 IPR040442 Pyruvate kinase-like domain superfamily YPD4_2623 IPR036618 PtsI, HPr-binding domain superfamily YPD4_2623 IPR008731 Phosphotransferase system, enzyme I N-terminal YPD4_2623 IPR006318 Phosphotransferase system, enzyme I-like YPD4_2623 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_2623 IPR000121 PEP-utilising enzyme, C-terminal YPD4_2623 IPR023151 PEP-utilising enzyme, conserved site YPD4_2623 IPR024692 Phosphotransferase system, enzyme I YPD4_2623 IPR036637 Phosphohistidine domain superfamily YPD4_2623 IPR018274 PEP-utilising enzyme, active site YPD4_2623 IPR008279 PEP-utilising enzyme, mobile domain YPD4_2624 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPD4_2624 IPR011055 Duplicated hybrid motif YPD4_2626 IPR038515 CpxA, periplasmic domain superfamily YPD4_2626 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2626 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2626 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2626 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPD4_2626 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2626 IPR003660 HAMP domain YPD4_2626 IPR005467 Histidine kinase domain YPD4_2626 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2627 IPR001789 Signal transduction response regulator, receiver domain YPD4_2627 IPR011006 CheY-like superfamily YPD4_2627 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2627 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_2627 IPR039420 Transcriptional regulatory protein WalR-like YPD4_2628 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_2628 IPR030190 Macrolide export protein MacA YPD4_2628 IPR006143 RND efflux pump, membrane fusion protein YPD4_2629 IPR017871 ABC transporter, conserved site YPD4_2629 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPD4_2629 IPR025857 MacB-like periplasmic core domain YPD4_2629 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2629 IPR003593 AAA+ ATPase domain YPD4_2629 IPR003838 ABC transporter permease protein domain YPD4_2629 IPR003439 ABC transporter-like YPD4_2630 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_2630 IPR017758 Coenzyme A disulphide reductase YPD4_2630 IPR023753 FAD/NAD(P)-binding domain YPD4_2630 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPD4_2630 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPD4_2630 IPR023536 Coenzyme A disulphide reductase, staphyolococci YPD4_2631 IPR001734 Sodium/solute symporter YPD4_2631 IPR038377 Sodium/glucose symporter superfamily YPD4_2632 IPR000994 Peptidase M24 YPD4_2632 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPD4_2632 IPR007865 Aminopeptidase P, N-terminal YPD4_2632 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPD4_2632 IPR036005 Creatinase/aminopeptidase-like YPD4_2633 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2633 IPR027619 Putative C-S lyase YPD4_2633 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2633 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2633 IPR004839 Aminotransferase, class I/classII YPD4_2635 IPR005467 Histidine kinase domain YPD4_2635 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2635 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2635 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2635 IPR003660 HAMP domain YPD4_2635 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2635 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2636 IPR039420 Transcriptional regulatory protein WalR-like YPD4_2636 IPR011006 CheY-like superfamily YPD4_2636 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_2636 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_2636 IPR001789 Signal transduction response regulator, receiver domain YPD4_2636 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2638 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPD4_2638 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_2638 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_2638 IPR005858 Cysteine synthase CysM YPD4_2638 IPR005856 Cysteine synthase YPD4_2639 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_2639 IPR003439 ABC transporter-like YPD4_2639 IPR017871 ABC transporter, conserved site YPD4_2639 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2639 IPR005666 Sulphate transport system permease protein 1 YPD4_2639 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal YPD4_2639 IPR003593 AAA+ ATPase domain YPD4_2640 IPR005667 Sulphate ABC transporter permease protein 2 YPD4_2640 IPR035906 MetI-like superfamily YPD4_2640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2640 IPR011866 Sulphate ABC transporter, permease protein CysW YPD4_2641 IPR005667 Sulphate ABC transporter permease protein 2 YPD4_2641 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2641 IPR011865 Sulphate ABC transporter, permease protein CysT YPD4_2641 IPR035906 MetI-like superfamily YPD4_2642 IPR000957 Sulphate/thiosulphate-binding, conserved site YPD4_2642 IPR005669 Thiosulphate/Sulfate-binding protein YPD4_2642 IPR034408 Sulphate/thiosulphate-binding site YPD4_2643 IPR020846 Major facilitator superfamily domain YPD4_2643 IPR036259 MFS transporter superfamily YPD4_2643 IPR011701 Major facilitator superfamily YPD4_2643 IPR004742 Sialic acid transporter YPD4_2644 IPR035472 RpiR-like, SIS domain YPD4_2644 IPR001347 Sugar isomerase (SIS) YPD4_2644 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2644 IPR000281 Helix-turn-helix protein RpiR YPD4_2644 IPR009057 Homeobox-like domain superfamily YPD4_2645 IPR037012 YhcH/YjgK/YiaL superfamily YPD4_2645 IPR004375 YhcH/YjgK/YiaL family YPD4_2646 IPR023945 N-acetylmannosamine kinase, bacterial YPD4_2646 IPR000600 ROK family YPD4_2647 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPD4_2647 IPR032675 Leucine-rich repeat domain superfamily YPD4_2647 IPR001611 Leucine-rich repeat YPD4_2649 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YPD4_2649 IPR013785 Aldolase-type TIM barrel YPD4_2649 IPR011060 Ribulose-phosphate binding barrel YPD4_2650 IPR013785 Aldolase-type TIM barrel YPD4_2650 IPR002220 DapA-like YPD4_2650 IPR005264 N-acetylneuraminate lyase YPD4_2650 IPR020625 Schiff base-forming aldolase, active site YPD4_2651 IPR006314 Dyp-type peroxidase YPD4_2651 IPR011008 Dimeric alpha-beta barrel YPD4_2652 IPR010938 Protein of unknown function DUF1131 YPD4_2652 IPR038714 YfeY-like superfamily YPD4_2653 IPR005220 Bacterial OB-fold YPD4_2653 IPR016052 Bacteriophage 933W, L0136 YPD4_2653 IPR036700 Bacterial OB-fold superfamily YPD4_2654 IPR003991 Pertactin virulence factor family YPD4_2654 IPR004899 Pertactin, central region YPD4_2654 IPR036709 Autotransporter beta-domain superfamily YPD4_2654 IPR005546 Autotransporter beta-domain YPD4_2654 IPR024973 ESPR domain YPD4_2654 IPR006315 Outer membrane autotransporter barrel YPD4_2654 IPR030930 Adhesin of bacterial autotransporter system YPD4_2654 IPR011050 Pectin lyase fold/virulence factor YPD4_2654 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPD4_2656 IPR016181 Acyl-CoA N-acyltransferase YPD4_2656 IPR000182 GNAT domain YPD4_2656 IPR023072 Acetyltransferase, YpeA YPD4_2657 IPR001260 Coproporphyrinogen III oxidase, aerobic YPD4_2657 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily YPD4_2657 IPR018375 Coproporphyrinogen III oxidase, conserved site YPD4_2658 IPR003791 Protein of unknown function UPF0178 YPD4_2659 IPR002505 Phosphate acetyl/butaryl transferase YPD4_2659 IPR036291 NAD(P)-binding domain superfamily YPD4_2659 IPR042113 Phosphate acetyltransferase, domain 1 YPD4_2659 IPR012188 NAD(P)-dependent malic enzyme YPD4_2659 IPR012302 Malic enzyme, NAD-binding YPD4_2659 IPR015884 Malic enzyme, conserved site YPD4_2659 IPR042112 Phosphate acetyltransferase, domain 2 YPD4_2659 IPR037062 Malic enzyme, N-terminal domain superfamily YPD4_2659 IPR012301 Malic enzyme, N-terminal domain YPD4_2660 IPR000086 NUDIX hydrolase domain YPD4_2660 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_2660 IPR004385 Nucleoside diphosphate pyrophosphatase YPD4_2661 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YPD4_2661 IPR038266 NapC/NirT cytochrome c superfamily YPD4_2661 IPR005126 NapC/NirT cytochrome c, N-terminal YPD4_2661 IPR024717 Denitrification system component NapC/NirT/NrfH YPD4_2661 IPR036280 Multiheme cytochrome superfamily YPD4_2661 IPR011031 Multihaem cytochrome YPD4_2662 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPD4_2662 IPR011031 Multihaem cytochrome YPD4_2662 IPR036280 Multiheme cytochrome superfamily YPD4_2663 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_2663 IPR010051 Periplasmic nitrate reductase, large subunit YPD4_2663 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPD4_2663 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_2663 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_2663 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain YPD4_2663 IPR006656 Molybdopterin oxidoreductase YPD4_2663 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPD4_2663 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPD4_2664 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_2664 IPR004496 Ferredoxin-type protein NapF YPD4_2664 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_2665 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_2665 IPR011006 CheY-like superfamily YPD4_2665 IPR001789 Signal transduction response regulator, receiver domain YPD4_2665 IPR000792 Transcription regulator LuxR, C-terminal YPD4_2666 IPR001036 Acriflavin resistance protein YPD4_2666 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPD4_2666 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_2668 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPD4_2669 IPR007197 Radical SAM YPD4_2669 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPD4_2669 IPR013785 Aldolase-type TIM barrel YPD4_2669 IPR023885 4Fe4S-binding SPASM domain YPD4_2670 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_2670 IPR024607 Sulfatase, conserved site YPD4_2670 IPR000917 Sulfatase, N-terminal YPD4_2671 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPD4_2671 IPR013611 Transport-associated OB, type 2 YPD4_2671 IPR017871 ABC transporter, conserved site YPD4_2671 IPR003593 AAA+ ATPase domain YPD4_2671 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_2671 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2671 IPR003439 ABC transporter-like YPD4_2671 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPD4_2672 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2672 IPR035906 MetI-like superfamily YPD4_2675 IPR006660 Arsenate reductase-like YPD4_2675 IPR036249 Thioredoxin-like superfamily YPD4_2675 IPR006504 Transcriptional regulator Spx/MgsR YPD4_2676 IPR002933 Peptidase M20 YPD4_2676 IPR036264 Bacterial exopeptidase dimerisation domain YPD4_2676 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YPD4_2676 IPR011650 Peptidase M20, dimerisation domain YPD4_2676 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPD4_2677 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPD4_2677 IPR003709 Peptidase M15B YPD4_2678 IPR032672 TmcA/NAT10/Kre33 YPD4_2678 IPR038321 TmcA, C-terminal domain superfamily YPD4_2678 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2678 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPD4_2678 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YPD4_2678 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain YPD4_2678 IPR007807 Helicase domain YPD4_2678 IPR016181 Acyl-CoA N-acyltransferase YPD4_2678 IPR000182 GNAT domain YPD4_2679 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPD4_2679 IPR016181 Acyl-CoA N-acyltransferase YPD4_2679 IPR000182 GNAT domain YPD4_2679 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain YPD4_2679 IPR007807 Helicase domain YPD4_2679 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YPD4_2679 IPR038321 TmcA, C-terminal domain superfamily YPD4_2679 IPR032672 TmcA/NAT10/Kre33 YPD4_2679 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2680 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPD4_2681 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPD4_2682 IPR018236 SAICAR synthetase, conserved site YPD4_2682 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YPD4_2682 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase YPD4_2682 IPR028923 SAICAR synthetase/ADE2, N-terminal YPD4_2683 IPR036515 Transposase IS200-like superfamily YPD4_2683 IPR002686 Transposase IS200-like YPD4_2684 IPR014524 Outer membrane protein assembly factor BamC YPD4_2684 IPR010653 NlpB/DapX lipoprotein YPD4_2684 IPR042268 Outer membrane protein assembly factor BamC, C-terminal YPD4_2685 IPR020624 Schiff base-forming aldolase, conserved site YPD4_2685 IPR020625 Schiff base-forming aldolase, active site YPD4_2685 IPR013785 Aldolase-type TIM barrel YPD4_2685 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YPD4_2685 IPR002220 DapA-like YPD4_2686 IPR002912 ACT domain YPD4_2686 IPR016867 Glycine cleavage system transcriptional repressor YPD4_2687 IPR024706 Peroxiredoxin, AhpC-type YPD4_2687 IPR036249 Thioredoxin-like superfamily YPD4_2687 IPR013766 Thioredoxin domain YPD4_2687 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPD4_2689 IPR002549 Transmembrane protein TqsA-like YPD4_2690 IPR011716 Tetratricopeptide TPR-3 YPD4_2690 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_2690 IPR001915 Peptidase M48 YPD4_2690 IPR030873 Beta-barrel assembly-enhancing protease YPD4_2691 IPR006659 Arsenate reductase YPD4_2691 IPR006660 Arsenate reductase-like YPD4_2691 IPR036249 Thioredoxin-like superfamily YPD4_2692 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2692 IPR013317 Chromosomal replication initiator protein DnaA YPD4_2692 IPR017788 DnaA regulatory inactivator Hda YPD4_2692 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPD4_2692 IPR020591 Chromosomal replication control, initiator DnaA-like YPD4_2693 IPR002686 Transposase IS200-like YPD4_2693 IPR036515 Transposase IS200-like superfamily YPD4_2694 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPD4_2694 IPR032678 tRNA synthetases class I, catalytic domain YPD4_2694 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2694 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YPD4_2694 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YPD4_2694 IPR015803 Cysteine-tRNA ligase YPD4_2695 IPR029000 Cyclophilin-like domain superfamily YPD4_2695 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPD4_2695 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPD4_2695 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPD4_2696 IPR029052 Metallo-dependent phosphatase-like YPD4_2696 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_2696 IPR010138 UDP-2,3-diacylglucosamine hydrolase YPD4_2697 IPR033747 Class I PurE YPD4_2697 IPR000031 PurE domain YPD4_2697 IPR024694 PurE, prokaryotic type YPD4_2697 IPR035893 PurE domain superfamily YPD4_2698 IPR011761 ATP-grasp fold YPD4_2698 IPR013815 ATP-grasp fold, subdomain 1 YPD4_2698 IPR016185 Pre-ATP-grasp domain superfamily YPD4_2698 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPD4_2698 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain YPD4_2698 IPR011054 Rudiment single hybrid motif YPD4_2698 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YPD4_2699 IPR038766 Membrane component of ABC transporter, predicted YPD4_2700 IPR038766 Membrane component of ABC transporter, predicted YPD4_2701 IPR003593 AAA+ ATPase domain YPD4_2701 IPR017871 ABC transporter, conserved site YPD4_2701 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2701 IPR003439 ABC transporter-like YPD4_2702 IPR013830 SGNH hydrolase-type esterase domain YPD4_2702 IPR008265 Lipase, GDSL, active site YPD4_2702 IPR036514 SGNH hydrolase superfamily YPD4_2703 IPR036291 NAD(P)-binding domain superfamily YPD4_2703 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_2703 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_2704 IPR036249 Thioredoxin-like superfamily YPD4_2704 IPR013766 Thioredoxin domain YPD4_2704 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_2705 IPR032435 Band 7, C-terminal extension YPD4_2705 IPR001972 Stomatin family YPD4_2705 IPR018080 Band 7/stomatin-like, conserved site YPD4_2705 IPR036013 Band 7/SPFH domain superfamily YPD4_2705 IPR001107 Band 7 domain YPD4_2706 IPR002810 NfeD-like, C-terminal domain YPD4_2707 IPR000551 MerR-type HTH domain YPD4_2707 IPR009061 Putative DNA-binding domain superfamily YPD4_2707 IPR011789 Cu(I)-responsive transcriptional regulator YPD4_2708 IPR023299 P-type ATPase, cytoplasmic domain N YPD4_2708 IPR023298 P-type ATPase, transmembrane domain superfamily YPD4_2708 IPR008250 P-type ATPase, A domain superfamily YPD4_2708 IPR036412 HAD-like superfamily YPD4_2708 IPR023214 HAD superfamily YPD4_2708 IPR017969 Heavy-metal-associated, conserved site YPD4_2708 IPR006121 Heavy metal-associated domain, HMA YPD4_2708 IPR018303 P-type ATPase, phosphorylation site YPD4_2708 IPR036163 Heavy metal-associated domain superfamily YPD4_2708 IPR027256 P-type ATPase, subfamily IB YPD4_2708 IPR001757 P-type ATPase YPD4_2709 IPR002816 TraB family YPD4_2710 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPD4_2710 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPD4_2710 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPD4_2711 IPR006179 5'-Nucleotidase/apyrase YPD4_2711 IPR006146 5'-Nucleotidase, conserved site YPD4_2711 IPR036907 5'-Nucleotidase, C-terminal domain superfamily YPD4_2711 IPR029052 Metallo-dependent phosphatase-like YPD4_2711 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_2711 IPR008334 5'-Nucleotidase, C-terminal YPD4_2712 IPR006179 5'-Nucleotidase/apyrase YPD4_2712 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_2712 IPR008334 5'-Nucleotidase, C-terminal YPD4_2712 IPR006146 5'-Nucleotidase, conserved site YPD4_2712 IPR036907 5'-Nucleotidase, C-terminal domain superfamily YPD4_2712 IPR029052 Metallo-dependent phosphatase-like YPD4_2713 IPR011701 Major facilitator superfamily YPD4_2713 IPR020846 Major facilitator superfamily domain YPD4_2713 IPR036259 MFS transporter superfamily YPD4_2714 IPR038770 Sodium/solute symporter superfamily YPD4_2714 IPR003148 Regulator of K+ conductance, N-terminal YPD4_2714 IPR036291 NAD(P)-binding domain superfamily YPD4_2714 IPR006153 Cation/H+ exchanger YPD4_2714 IPR004771 K+/H+ exchanger YPD4_2715 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_2715 IPR029056 Ribokinase-like YPD4_2715 IPR011611 Carbohydrate kinase PfkB YPD4_2716 IPR003856 Polysaccharide chain length determinant N-terminal domain YPD4_2717 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPD4_2717 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPD4_2717 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPD4_2717 IPR016066 Alpha-D-phosphohexomutase, conserved site YPD4_2717 IPR005841 Alpha-D-phosphohexomutase superfamily YPD4_2717 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPD4_2717 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPD4_2717 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPD4_2718 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_2718 IPR001173 Glycosyltransferase 2-like YPD4_2719 IPR011051 RmlC-like cupin domain superfamily YPD4_2719 IPR014710 RmlC-like jelly roll fold YPD4_2719 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_2719 IPR005835 Nucleotidyl transferase domain YPD4_2719 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal YPD4_2719 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YPD4_2720 IPR036291 NAD(P)-binding domain superfamily YPD4_2720 IPR001509 NAD-dependent epimerase/dehydratase YPD4_2720 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase YPD4_2721 IPR006368 GDP-mannose 4,6-dehydratase YPD4_2721 IPR036291 NAD(P)-binding domain superfamily YPD4_2721 IPR016040 NAD(P)-binding domain YPD4_2722 IPR016040 NAD(P)-binding domain YPD4_2722 IPR006368 GDP-mannose 4,6-dehydratase YPD4_2722 IPR036291 NAD(P)-binding domain superfamily YPD4_2723 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain YPD4_2723 IPR001296 Glycosyl transferase, family 1 YPD4_2729 IPR036291 NAD(P)-binding domain superfamily YPD4_2729 IPR001509 NAD-dependent epimerase/dehydratase YPD4_2730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2730 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPD4_2730 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2731 IPR013445 CDP-glucose 4,6-dehydratase YPD4_2731 IPR016040 NAD(P)-binding domain YPD4_2731 IPR036291 NAD(P)-binding domain superfamily YPD4_2732 IPR013446 Glucose-1-phosphate cytidylyltransferase YPD4_2732 IPR005835 Nucleotidyl transferase domain YPD4_2732 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_2733 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_2733 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_2733 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPD4_2733 IPR012675 Beta-grasp domain superfamily YPD4_2733 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPD4_2733 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_2733 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_2733 IPR017938 Riboflavin synthase-like beta-barrel YPD4_2733 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_2734 IPR033659 Ferrochelatase, N-terminal YPD4_2734 IPR033644 Ferrochelatase, C-terminal YPD4_2734 IPR019772 Ferrochelatase, active site YPD4_2734 IPR001015 Ferrochelatase YPD4_2735 IPR007862 Adenylate kinase, active site lid domain YPD4_2735 IPR033690 Adenylate kinase, conserved site YPD4_2735 IPR000850 Adenylate kinase/UMP-CMP kinase YPD4_2735 IPR006259 Adenylate kinase subfamily YPD4_2735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2736 IPR019805 Heat shock protein Hsp90, conserved site YPD4_2736 IPR001404 Heat shock protein Hsp90 family YPD4_2736 IPR020575 Heat shock protein Hsp90, N-terminal YPD4_2736 IPR037196 HSP90, C-terminal domain YPD4_2736 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2736 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_2736 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2737 IPR000093 DNA recombination protein RecR YPD4_2737 IPR023627 Recombination protein RecR YPD4_2737 IPR023628 Recombination protein RecR, C4-type zinc finger YPD4_2737 IPR015967 Recombination protein RecR, conserved site YPD4_2737 IPR006171 TOPRIM domain YPD4_2737 IPR034137 RecR, TOPRIM domain YPD4_2738 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPD4_2738 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YPD4_2739 IPR003593 AAA+ ATPase domain YPD4_2739 IPR001270 ClpA/B family YPD4_2739 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPD4_2739 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YPD4_2739 IPR021029 DNA polymerase III, tau subunit, domain V YPD4_2739 IPR012763 DNA polymerase III, subunit gamma/ tau YPD4_2739 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2739 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily YPD4_2739 IPR022754 DNA polymerase III, gamma subunit, domain III YPD4_2740 IPR029057 Phosphoribosyltransferase-like YPD4_2740 IPR000836 Phosphoribosyltransferase domain YPD4_2740 IPR005764 Adenine phosphoribosyl transferase YPD4_2742 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPD4_2742 IPR023298 P-type ATPase, transmembrane domain superfamily YPD4_2742 IPR010920 LSM domain superfamily YPD4_2742 IPR006685 Mechanosensitive ion channel MscS YPD4_2742 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPD4_2742 IPR024393 Mechanosensitive ion channel MscS, porin domain YPD4_2742 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPD4_2742 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPD4_2742 IPR006686 Mechanosensitive ion channel MscS, conserved site YPD4_2743 IPR003787 Sulphur relay, DsrE/F-like protein YPD4_2743 IPR027396 DsrEFH-like YPD4_2744 IPR001647 DNA-binding HTH domain, TetR-type YPD4_2744 IPR009057 Homeobox-like domain superfamily YPD4_2744 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPD4_2744 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPD4_2744 IPR013572 Transcription regulator MAATS, C-terminal YPD4_2745 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_2745 IPR006143 RND efflux pump, membrane fusion protein YPD4_2746 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPD4_2746 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_2746 IPR001036 Acriflavin resistance protein YPD4_2747 IPR001036 Acriflavin resistance protein YPD4_2747 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_2747 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPD4_2749 IPR019693 Biofilm formation regulator YbaJ YPD4_2750 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPD4_2750 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPD4_2750 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2751 IPR039366 YscW/ExsB YPD4_2752 IPR029069 HotDog domain superfamily YPD4_2752 IPR003703 Acyl-CoA thioesterase YPD4_2753 IPR029020 Ammonium/urea transporter YPD4_2753 IPR001905 Ammonium transporter YPD4_2753 IPR024041 Ammonium transporter AmtB-like domain YPD4_2753 IPR018047 Ammonium transporter, conserved site YPD4_2754 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPD4_2754 IPR017918 Nitrogen regulatory protein PII, conserved site YPD4_2754 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPD4_2754 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPD4_2754 IPR002187 Nitrogen regulatory protein PII YPD4_2755 IPR039421 Type I protein exporter YPD4_2755 IPR003439 ABC transporter-like YPD4_2755 IPR017871 ABC transporter, conserved site YPD4_2755 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_2755 IPR011527 ABC transporter type 1, transmembrane domain YPD4_2755 IPR003593 AAA+ ATPase domain YPD4_2755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2756 IPR011527 ABC transporter type 1, transmembrane domain YPD4_2756 IPR003593 AAA+ ATPase domain YPD4_2756 IPR039421 Type I protein exporter YPD4_2756 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_2756 IPR003439 ABC transporter-like YPD4_2756 IPR017871 ABC transporter, conserved site YPD4_2756 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2757 IPR000485 AsnC-type HTH domain YPD4_2757 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPD4_2757 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPD4_2757 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2757 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2757 IPR011991 ArsR-like helix-turn-helix domain YPD4_2757 IPR019888 Transcription regulator AsnC-type YPD4_2757 IPR011008 Dimeric alpha-beta barrel YPD4_2758 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPD4_2758 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_2758 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_2758 IPR005856 Cysteine synthase YPD4_2758 IPR005859 Cysteine synthase CysK YPD4_2759 IPR000150 Cof family YPD4_2759 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPD4_2759 IPR023214 HAD superfamily YPD4_2759 IPR023938 HMP-PP phosphatase YPD4_2759 IPR036412 HAD-like superfamily YPD4_2760 IPR039424 Solute-binding protein family 5 YPD4_2760 IPR000914 Solute-binding protein family 5 domain YPD4_2760 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPD4_2761 IPR018317 Queuosine biosynthesis protein QueC YPD4_2761 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2762 IPR029069 HotDog domain superfamily YPD4_2762 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPD4_2763 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPD4_2763 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPD4_2763 IPR010994 RuvA domain 2-like YPD4_2764 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPD4_2764 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site YPD4_2764 IPR027304 Trigger factor/SurA domain superfamily YPD4_2765 IPR015947 PUA-like superfamily YPD4_2765 IPR003593 AAA+ ATPase domain YPD4_2765 IPR003959 ATPase, AAA-type, core YPD4_2765 IPR027543 Lon protease, bacterial YPD4_2765 IPR027065 Lon protease YPD4_2765 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_2765 IPR003111 Lon, substrate-binding domain YPD4_2765 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2765 IPR008268 Peptidase S16, active site YPD4_2765 IPR004815 Lon protease, bacterial/eukaryotic-type YPD4_2765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_2765 IPR008269 Peptidase S16, Lon proteolytic domain YPD4_2766 IPR027065 Lon protease YPD4_2766 IPR003959 ATPase, AAA-type, core YPD4_2766 IPR003593 AAA+ ATPase domain YPD4_2766 IPR004815 Lon protease, bacterial/eukaryotic-type YPD4_2766 IPR008269 Peptidase S16, Lon proteolytic domain YPD4_2766 IPR003111 Lon, substrate-binding domain YPD4_2766 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2766 IPR008268 Peptidase S16, active site YPD4_2766 IPR027543 Lon protease, bacterial YPD4_2766 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_2766 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_2766 IPR015947 PUA-like superfamily YPD4_2767 IPR003593 AAA+ ATPase domain YPD4_2767 IPR003959 ATPase, AAA-type, core YPD4_2767 IPR010603 Zinc finger, ClpX C4-type YPD4_2767 IPR038366 Zinc finger, ClpX C4-type superfamily YPD4_2767 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2767 IPR004487 Clp protease, ATP-binding subunit ClpX YPD4_2767 IPR019489 Clp ATPase, C-terminal YPD4_2768 IPR001907 ATP-dependent Clp protease proteolytic subunit YPD4_2768 IPR018215 ClpP, Ser active site YPD4_2768 IPR033135 ClpP, histidine active site YPD4_2768 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPD4_2768 IPR029045 ClpP/crotonase-like domain superfamily YPD4_2769 IPR036611 Trigger factor ribosome-binding domain superfamily YPD4_2769 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPD4_2769 IPR008880 Trigger factor, C-terminal YPD4_2769 IPR005215 Trigger factor YPD4_2769 IPR008881 Trigger factor, ribosome-binding, bacterial YPD4_2769 IPR037041 Trigger factor, C-terminal domain superfamily YPD4_2769 IPR027304 Trigger factor/SurA domain superfamily YPD4_2770 IPR036065 BolA-like superfamily YPD4_2770 IPR002634 BolA protein YPD4_2771 IPR012640 Membrane lipoprotein, lipid attachment site YPD4_2771 IPR005619 Uncharacterised protein family, YajG YPD4_2772 IPR020846 Major facilitator superfamily domain YPD4_2772 IPR011701 Major facilitator superfamily YPD4_2772 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPD4_2772 IPR036259 MFS transporter superfamily YPD4_2773 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily YPD4_2773 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YPD4_2774 IPR002429 Cytochrome c oxidase subunit II-like C-terminal YPD4_2774 IPR010514 COX aromatic rich motif YPD4_2774 IPR008972 Cupredoxin YPD4_2774 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain YPD4_2774 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain YPD4_2774 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily YPD4_2774 IPR006333 Cytochrome o ubiquinol oxidase subunit II YPD4_2775 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YPD4_2775 IPR036927 Cytochrome c oxidase-like, subunit I superfamily YPD4_2775 IPR000883 Cytochrome c oxidase subunit I YPD4_2775 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YPD4_2775 IPR023616 Cytochrome c oxidase-like, subunit I domain YPD4_2776 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YPD4_2776 IPR035973 Cytochrome c oxidase subunit III-like superfamily YPD4_2776 IPR000298 Cytochrome c oxidase subunit III-like YPD4_2776 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YPD4_2776 IPR024791 Cytochrome c oxidase subunit III YPD4_2776 IPR033946 Ubiquinol oxidase subunit III domain YPD4_2777 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YPD4_2777 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YPD4_2778 IPR000537 UbiA prenyltransferase family YPD4_2778 IPR006369 Protohaem IX farnesyltransferase YPD4_2778 IPR030470 UbiA prenyltransferase conserved site YPD4_2779 IPR036259 MFS transporter superfamily YPD4_2779 IPR011701 Major facilitator superfamily YPD4_2779 IPR020846 Major facilitator superfamily domain YPD4_2780 IPR036183 YajQ-like superfamily YPD4_2780 IPR035571 UPF0234-like, C-terminal YPD4_2780 IPR035570 UPF0234, N-terminal YPD4_2780 IPR007551 Protein of unknown function DUF520 YPD4_2781 IPR036291 NAD(P)-binding domain superfamily YPD4_2781 IPR013752 Ketopantoate reductase, C-terminal domain YPD4_2781 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_2781 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_2781 IPR013332 Ketopantoate reductase, N-terminal domain YPD4_2781 IPR003710 Ketopantoate reductase ApbA/PanE YPD4_2782 IPR002818 DJ-1/PfpI YPD4_2782 IPR006287 Protein/nucleic acid deglycase DJ-1 YPD4_2782 IPR029062 Class I glutamine amidotransferase-like YPD4_2783 IPR036873 Rhodanese-like domain superfamily YPD4_2783 IPR003720 tRNA sulfurtransferase ThiI YPD4_2783 IPR004114 THUMP domain YPD4_2783 IPR020536 Thil, AANH domain YPD4_2783 IPR026340 Thiazole biosynthesis domain YPD4_2783 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2783 IPR001763 Rhodanese-like domain YPD4_2784 IPR033749 Polyprenyl synthetase, conserved site YPD4_2784 IPR008949 Isoprenoid synthase domain superfamily YPD4_2784 IPR000092 Polyprenyl synthetase YPD4_2785 IPR005477 Deoxyxylulose-5-phosphate synthase YPD4_2785 IPR005475 Transketolase-like, pyrimidine-binding domain YPD4_2785 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPD4_2785 IPR005474 Transketolase, N-terminal YPD4_2785 IPR020826 Transketolase binding site YPD4_2785 IPR029061 Thiamin diphosphate-binding fold YPD4_2785 IPR033248 Transketolase, C-terminal domain YPD4_2787 IPR007686 YutG/PgpA domain YPD4_2787 IPR026037 Phosphatidylglycerophosphatase A YPD4_2787 IPR036681 PgpA-like superfamily YPD4_2788 IPR036921 PurM-like, N-terminal domain superfamily YPD4_2788 IPR016188 PurM-like, N-terminal domain YPD4_2788 IPR006283 Thiamine-monophosphate kinase YPD4_2788 IPR036676 PurM-like, C-terminal domain superfamily YPD4_2788 IPR010918 PurM-like, C-terminal domain YPD4_2789 IPR035926 NusB-like superfamily YPD4_2789 IPR011605 NusB antitermination factor YPD4_2789 IPR006027 NusB/RsmB/TIM44 YPD4_2790 IPR034964 Lumazine synthase YPD4_2790 IPR002180 Lumazine/riboflavin synthase YPD4_2790 IPR036467 Lumazine/riboflavin synthase superfamily YPD4_2791 IPR016193 Cytidine deaminase-like YPD4_2791 IPR024072 Dihydrofolate reductase-like domain superfamily YPD4_2791 IPR004794 Riboflavin biosynthesis protein RibD YPD4_2791 IPR002125 Cytidine and deoxycytidylate deaminase domain YPD4_2791 IPR016192 APOBEC/CMP deaminase, zinc-binding YPD4_2791 IPR011549 Riboflavin-specific deaminase, C-terminal YPD4_2791 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YPD4_2792 IPR003796 Ribonucleotide reductase regulator NrdR-like YPD4_2792 IPR005144 ATP-cone domain YPD4_2795 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPD4_2795 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPD4_2795 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPD4_2795 IPR005665 Protein-export membrane protein SecF, bacterial YPD4_2796 IPR005791 Protein translocase subunit SecD YPD4_2796 IPR027398 SecD export protein N-terminal TM domain YPD4_2796 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPD4_2796 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPD4_2796 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPD4_2797 IPR003849 Preprotein translocase YajC YPD4_2798 IPR002616 tRNA-guanine(15) transglycosylase-like YPD4_2798 IPR036511 Queuine tRNA-ribosyltransferase-like YPD4_2798 IPR004803 tRNA-guanine transglycosylase YPD4_2799 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily YPD4_2799 IPR042119 QueA, domain 2 YPD4_2799 IPR042118 QueA, domain 1 YPD4_2799 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YPD4_2800 IPR007431 Acyl carrier protein phosphodiesterase YPD4_2800 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YPD4_2801 IPR024706 Peroxiredoxin, AhpC-type YPD4_2801 IPR013766 Thioredoxin domain YPD4_2801 IPR019479 Peroxiredoxin, C-terminal YPD4_2801 IPR036249 Thioredoxin-like superfamily YPD4_2801 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPD4_2802 IPR000101 Gamma-glutamyltranspeptidase YPD4_2802 IPR029055 Nucleophile aminohydrolases, N-terminal YPD4_2803 IPR036291 NAD(P)-binding domain superfamily YPD4_2803 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_2803 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPD4_2803 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_2804 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPD4_2804 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YPD4_2804 IPR013780 Glycosyl hydrolase, all-beta YPD4_2804 IPR017853 Glycoside hydrolase superfamily YPD4_2804 IPR014756 Immunoglobulin E-set YPD4_2804 IPR017069 Maltodextrin glucosidase YPD4_2805 IPR004840 Amino acid permease, conserved site YPD4_2805 IPR004841 Amino acid permease/ SLC12A domain YPD4_2806 IPR004685 Branched-chain amino acid transport system II carrier protein YPD4_2807 IPR011862 Phosphate binding protein YPD4_2807 IPR024370 PBP domain YPD4_2808 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2808 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2808 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2808 IPR035965 PAS domain superfamily YPD4_2808 IPR021766 Phosphate regulon sensor protein PhoR YPD4_2808 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2808 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YPD4_2808 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2808 IPR005467 Histidine kinase domain YPD4_2808 IPR000014 PAS domain YPD4_2808 IPR013767 PAS fold YPD4_2809 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2809 IPR039420 Transcriptional regulatory protein WalR-like YPD4_2809 IPR001789 Signal transduction response regulator, receiver domain YPD4_2809 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YPD4_2809 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_2809 IPR011006 CheY-like superfamily YPD4_2810 IPR004593 Nuclease SbcCD subunit D YPD4_2810 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain YPD4_2810 IPR029052 Metallo-dependent phosphatase-like YPD4_2810 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_2810 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPD4_2811 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2811 IPR038729 Rad50/SbcC-type AAA domain YPD4_2811 IPR004592 Nuclease SbcC, gammaproteobacteria type YPD4_2812 IPR000600 ROK family YPD4_2813 IPR007476 Putative exonuclease, RdgC YPD4_2814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2814 IPR023000 Shikimate kinase, conserved site YPD4_2814 IPR027544 Shikimate kinase 2 YPD4_2814 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPD4_2814 IPR031322 Shikimate kinase/gluconokinase YPD4_2816 IPR013216 Methyltransferase type 11 YPD4_2816 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2817 IPR009875 PilZ domain YPD4_2817 IPR023787 Type III secretion system flagellar brake protein YcgR YPD4_2817 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPD4_2817 IPR012349 FMN-binding split barrel YPD4_2818 IPR012134 Glutamate-5-semialdehyde dehydrogenase YPD4_2818 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_2818 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_2818 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_2818 IPR015590 Aldehyde dehydrogenase domain YPD4_2818 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YPD4_2818 IPR000965 GPR domain YPD4_2819 IPR011529 Glutamate 5-kinase YPD4_2819 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YPD4_2819 IPR019797 Glutamate 5-kinase, conserved site YPD4_2819 IPR002478 PUA domain YPD4_2819 IPR015947 PUA-like superfamily YPD4_2819 IPR001057 Glutamate/acetylglutamate kinase YPD4_2819 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_2819 IPR036393 Acetylglutamate kinase-like superfamily YPD4_2819 IPR041739 Glutamate-5-kinase domain YPD4_2819 IPR036974 PUA domain superfamily YPD4_2820 IPR038208 Sigma factor-binding protein Crl superfamily YPD4_2820 IPR009986 Sigma factor-binding transcriptional regulator Crl YPD4_2822 IPR000836 Phosphoribosyltransferase domain YPD4_2822 IPR029057 Phosphoribosyltransferase-like YPD4_2822 IPR023747 Xanthine-guanine phosphoribosyltransferase YPD4_2825 IPR011650 Peptidase M20, dimerisation domain YPD4_2825 IPR002933 Peptidase M20 YPD4_2825 IPR001160 Peptidase M20C, Xaa-His dipeptidase YPD4_2826 IPR036775 DNA polymerase, Y-family, little finger domain superfamily YPD4_2826 IPR001126 UmuC domain YPD4_2826 IPR017961 DNA polymerase, Y-family, little finger domain YPD4_2826 IPR024728 DNA polymerase type-Y, HhH motif YPD4_2826 IPR022880 DNA polymerase IV YPD4_2827 IPR030395 Glycerophosphodiester phosphodiesterase domain YPD4_2827 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPD4_2828 IPR042159 Flavin-trafficking protein ApbE YPD4_2828 IPR003374 ApbE-like superfamily YPD4_2828 IPR024932 Flavin transferase ApbE YPD4_2829 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPD4_2829 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPD4_2829 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_2829 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F YPD4_2829 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPD4_2829 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_2829 IPR017938 Riboflavin synthase-like beta-barrel YPD4_2829 IPR012675 Beta-grasp domain superfamily YPD4_2829 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_2829 IPR036010 2Fe-2S ferredoxin-like superfamily YPD4_2830 IPR003667 NqrDE/RnfAE YPD4_2830 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPD4_2831 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D YPD4_2831 IPR003667 NqrDE/RnfAE YPD4_2832 IPR007329 FMN-binding YPD4_2832 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C YPD4_2833 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPD4_2833 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B YPD4_2834 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A YPD4_2834 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain YPD4_2835 IPR005490 L,D-transpeptidase catalytic domain YPD4_2835 IPR038063 L,D-transpeptidase catalytic domain-like YPD4_2836 IPR029055 Nucleophile aminohydrolases, N-terminal YPD4_2836 IPR026869 Putative glutamine amidotransferase type 2 YPD4_2836 IPR017932 Glutamine amidotransferase type 2 domain YPD4_2837 IPR035461 GmhA/DiaA YPD4_2837 IPR001347 Sugar isomerase (SIS) YPD4_2837 IPR004515 Phosphoheptose isomerase YPD4_2838 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily YPD4_2838 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPD4_2838 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPD4_2838 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YPD4_2838 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPD4_2838 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPD4_2840 IPR040542 HMW1 domain 2 YPD4_2840 IPR041109 HMW1C N-terminal YPD4_2841 IPR011050 Pectin lyase fold/virulence factor YPD4_2841 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_2841 IPR012334 Pectin lyase fold YPD4_2842 IPR013686 Polypeptide-transport-associated, ShlB-type YPD4_2842 IPR005565 Haemolysin activator HlyB, C-terminal YPD4_2842 IPR034746 POTRA domain YPD4_2843 IPR010158 Amidase, carbamoylase-type YPD4_2843 IPR036264 Bacterial exopeptidase dimerisation domain YPD4_2843 IPR011650 Peptidase M20, dimerisation domain YPD4_2843 IPR002933 Peptidase M20 YPD4_2844 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2844 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2844 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2844 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase YPD4_2844 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_2844 IPR000192 Aminotransferase class V domain YPD4_2845 IPR001584 Integrase, catalytic core YPD4_2845 IPR012337 Ribonuclease H-like superfamily YPD4_2845 IPR017894 HTH domain, IS21 transposase-type YPD4_2845 IPR036397 Ribonuclease H superfamily YPD4_2845 IPR006120 Resolvase, HTH domain YPD4_2846 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_2846 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2846 IPR002611 IstB-like ATP-binding protein YPD4_2846 IPR003593 AAA+ ATPase domain YPD4_2846 IPR001270 ClpA/B family YPD4_2847 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2847 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2847 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPD4_2847 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2847 IPR000192 Aminotransferase class V domain YPD4_2847 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase YPD4_2848 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2848 IPR003439 ABC transporter-like YPD4_2848 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPD4_2848 IPR003593 AAA+ ATPase domain YPD4_2848 IPR017871 ABC transporter, conserved site YPD4_2850 IPR035906 MetI-like superfamily YPD4_2850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_2850 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_2851 IPR018313 Solute-binding protein family 3, conserved site YPD4_2851 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_2851 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPD4_2851 IPR001320 Ionotropic glutamate receptor YPD4_2853 IPR014087 1-carboxybiuret hydrolase, AtzE subunit YPD4_2853 IPR036928 Amidase signature (AS) superfamily YPD4_2853 IPR023631 Amidase signature domain YPD4_2853 IPR000120 Amidase YPD4_2855 IPR020846 Major facilitator superfamily domain YPD4_2855 IPR036259 MFS transporter superfamily YPD4_2855 IPR011701 Major facilitator superfamily YPD4_2856 IPR011606 Branched-chain amino acid transport, permease YPD4_2857 IPR008407 Branched-chain amino acid transport, AzlD YPD4_2858 IPR000835 MarR-type HTH domain YPD4_2858 IPR023187 Transcriptional regulator MarR-type, conserved site YPD4_2858 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2858 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2859 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_2859 IPR005694 Efflux pump membrane protein YPD4_2860 IPR011701 Major facilitator superfamily YPD4_2860 IPR004638 Drug resistance transporter EmrB-like YPD4_2860 IPR020846 Major facilitator superfamily domain YPD4_2860 IPR036259 MFS transporter superfamily YPD4_2861 IPR011701 Major facilitator superfamily YPD4_2861 IPR020846 Major facilitator superfamily domain YPD4_2861 IPR036259 MFS transporter superfamily YPD4_2861 IPR004638 Drug resistance transporter EmrB-like YPD4_2862 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YPD4_2862 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPD4_2862 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_2862 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPD4_2862 IPR004441 RNA methyltransferase TrmH family YPD4_2862 IPR029064 50S ribosomal protein L30e-like YPD4_2862 IPR029028 Alpha/beta knot methyltransferases YPD4_2864 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YPD4_2864 IPR036291 NAD(P)-binding domain superfamily YPD4_2864 IPR011761 ATP-grasp fold YPD4_2864 IPR016102 Succinyl-CoA synthetase-like YPD4_2864 IPR000182 GNAT domain YPD4_2864 IPR003781 CoA-binding YPD4_2864 IPR013815 ATP-grasp fold, subdomain 1 YPD4_2864 IPR016181 Acyl-CoA N-acyltransferase YPD4_2865 IPR025202 Phospholipase D-like domain YPD4_2865 IPR001736 Phospholipase D/Transphosphatidylase YPD4_2865 IPR016270 CDP-alcohol phosphatidyltransferase class-II family YPD4_2866 IPR017028 Uncharacterised conserved protein UCP034456 YPD4_2866 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPD4_2868 IPR017730 Chaperonin ClpB YPD4_2868 IPR036628 Clp, N-terminal domain superfamily YPD4_2868 IPR004176 Clp, N-terminal YPD4_2868 IPR003959 ATPase, AAA-type, core YPD4_2868 IPR001270 ClpA/B family YPD4_2868 IPR018368 ClpA/B, conserved site 1 YPD4_2868 IPR028299 ClpA/B, conserved site 2 YPD4_2868 IPR003593 AAA+ ATPase domain YPD4_2868 IPR041546 ClpA/ClpB, AAA lid domain YPD4_2868 IPR019489 Clp ATPase, C-terminal YPD4_2868 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2869 IPR003593 AAA+ ATPase domain YPD4_2869 IPR003959 ATPase, AAA-type, core YPD4_2869 IPR017730 Chaperonin ClpB YPD4_2869 IPR004176 Clp, N-terminal YPD4_2869 IPR001270 ClpA/B family YPD4_2869 IPR018368 ClpA/B, conserved site 1 YPD4_2869 IPR028299 ClpA/B, conserved site 2 YPD4_2869 IPR041546 ClpA/ClpB, AAA lid domain YPD4_2869 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2869 IPR036628 Clp, N-terminal domain superfamily YPD4_2869 IPR019489 Clp ATPase, C-terminal YPD4_2871 IPR036986 RNA-binding S4 domain superfamily YPD4_2871 IPR002942 RNA-binding S4 domain YPD4_2871 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPD4_2871 IPR006225 Pseudouridine synthase, RluC/RluD YPD4_2871 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_2871 IPR006145 Pseudouridine synthase, RsuA/RluA YPD4_2872 IPR039565 Outer membrane lipoprotein BamD-like YPD4_2872 IPR017689 Outer membrane protein assembly factor BamD YPD4_2872 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_2873 IPR003489 Ribosome hibernation promoting factor/RaiA YPD4_2873 IPR036567 Ribosome hibernation promotion factor-like YPD4_2874 IPR036515 Transposase IS200-like superfamily YPD4_2874 IPR002686 Transposase IS200-like YPD4_2875 IPR010952 Chorismate mutase, gammaproteobacteria YPD4_2875 IPR002701 Chorismate mutase II, prokaryotic-type YPD4_2875 IPR036263 Chorismate mutase type II superfamily YPD4_2875 IPR036979 Chorismate mutase domain superfamily YPD4_2875 IPR018528 Prephenate dehydratase, conserved site YPD4_2875 IPR002912 ACT domain YPD4_2875 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase YPD4_2875 IPR001086 Prephenate dehydratase YPD4_2876 IPR011277 Chorismate mutase, T-protein YPD4_2876 IPR003099 Prephenate dehydrogenase YPD4_2876 IPR002701 Chorismate mutase II, prokaryotic-type YPD4_2876 IPR036979 Chorismate mutase domain superfamily YPD4_2876 IPR036263 Chorismate mutase type II superfamily YPD4_2876 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YPD4_2876 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_2876 IPR036291 NAD(P)-binding domain superfamily YPD4_2877 IPR006219 DHAP synthase, class 1 YPD4_2877 IPR013785 Aldolase-type TIM barrel YPD4_2877 IPR006218 DAHP synthetase I/KDSA YPD4_2878 IPR006219 DHAP synthase, class 1 YPD4_2878 IPR006218 DAHP synthetase I/KDSA YPD4_2878 IPR013785 Aldolase-type TIM barrel YPD4_2879 IPR001789 Signal transduction response regulator, receiver domain YPD4_2879 IPR007492 LytTR DNA-binding domain YPD4_2879 IPR011006 CheY-like superfamily YPD4_2880 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPD4_2881 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPD4_2882 IPR007433 Protein of unknown function DUF481 YPD4_2884 IPR008991 Translation protein SH3-like domain superfamily YPD4_2884 IPR038657 Ribosomal protein L19 superfamily YPD4_2884 IPR018257 Ribosomal protein L19, conserved site YPD4_2884 IPR001857 Ribosomal protein L19 YPD4_2885 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPD4_2885 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YPD4_2885 IPR029028 Alpha/beta knot methyltransferases YPD4_2885 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YPD4_2885 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YPD4_2886 IPR011033 PRC-barrel-like superfamily YPD4_2886 IPR011961 16S rRNA processing protein RimM YPD4_2886 IPR027275 PRC-barrel domain YPD4_2886 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_2886 IPR036976 RimM, N-terminal domain superfamily YPD4_2886 IPR002676 RimM, N-terminal YPD4_2887 IPR003593 AAA+ ATPase domain YPD4_2887 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2887 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily YPD4_2887 IPR004780 Signal recognition particle protein YPD4_2887 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPD4_2887 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPD4_2887 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YPD4_2887 IPR022941 Signal recognition particle, SRP54 subunit YPD4_2887 IPR013822 Signal recognition particle SRP54, helical bundle YPD4_2888 IPR002541 Cytochrome c assembly protein YPD4_2889 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_2889 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_2889 IPR005170 Transporter-associated domain YPD4_2889 IPR000644 CBS domain YPD4_2889 IPR002550 CNNM, transmembrane domain YPD4_2891 IPR003815 S-ribosylhomocysteinase (LuxS) YPD4_2891 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPD4_2891 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily YPD4_2892 IPR006334 Glutamate--cysteine ligase, monofunctional YPD4_2892 IPR007370 Glutamate--cysteine ligase YPD4_2892 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPD4_2893 IPR032816 SNARE associated Golgi protein YPD4_2894 IPR010976 Beta-phosphoglucomutase hydrolase YPD4_2894 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_2894 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPD4_2894 IPR036412 HAD-like superfamily YPD4_2894 IPR006439 HAD hydrolase, subfamily IA YPD4_2894 IPR023214 HAD superfamily YPD4_2895 IPR002318 Alanine-tRNA ligase, class IIc YPD4_2895 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPD4_2895 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily YPD4_2895 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPD4_2895 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_2895 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain YPD4_2895 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YPD4_2895 IPR003156 DHHA1 domain YPD4_2895 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YPD4_2896 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2896 IPR003783 Regulatory protein RecX YPD4_2897 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2897 IPR020584 DNA recombination/repair protein RecA, conserved site YPD4_2897 IPR013765 DNA recombination and repair protein RecA YPD4_2897 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPD4_2897 IPR023400 DNA recombination and repair protein RecA, C-terminal YPD4_2897 IPR003593 AAA+ ATPase domain YPD4_2897 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface YPD4_2898 IPR036653 CinA-like, C-terminal YPD4_2898 IPR008136 CinA, C-terminal YPD4_2899 IPR023745 MSF-type transporter, YcaD YPD4_2899 IPR011701 Major facilitator superfamily YPD4_2899 IPR020846 Major facilitator superfamily domain YPD4_2899 IPR036259 MFS transporter superfamily YPD4_2902 IPR000577 Carbohydrate kinase, FGGY YPD4_2902 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_2902 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_2902 IPR042016 Apulose kinase YPD4_2903 IPR029061 Thiamin diphosphate-binding fold YPD4_2903 IPR033248 Transketolase, C-terminal domain YPD4_2903 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPD4_2903 IPR005475 Transketolase-like, pyrimidine-binding domain YPD4_2904 IPR005474 Transketolase, N-terminal YPD4_2904 IPR029061 Thiamin diphosphate-binding fold YPD4_2905 IPR001851 ABC transporter, permease YPD4_2906 IPR003439 ABC transporter-like YPD4_2906 IPR003593 AAA+ ATPase domain YPD4_2906 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2906 IPR017871 ABC transporter, conserved site YPD4_2906 IPR015861 ABC transporter, ribose import, RbsA YPD4_2909 IPR010255 Haem peroxidase superfamily YPD4_2909 IPR019794 Peroxidase, active site YPD4_2909 IPR000763 Catalase-peroxidase haem YPD4_2909 IPR002016 Haem peroxidase YPD4_2909 IPR019793 Peroxidases heam-ligand binding site YPD4_2910 IPR009155 Cytochrome b562 YPD4_2910 IPR010980 Cytochrome c/b562 YPD4_2911 IPR026269 Tat proofreading chaperone DmsD-type YPD4_2911 IPR020945 DMSO/Nitrate reductase chaperone YPD4_2911 IPR028611 Tat proofreading chaperone DmsD YPD4_2911 IPR036411 TorD-like superfamily YPD4_2912 IPR007059 DMSO reductase anchor subunit (DmsC) YPD4_2913 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_2913 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_2913 IPR014297 Dimethylsulphoxide reductase, chain B YPD4_2914 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPD4_2914 IPR006656 Molybdopterin oxidoreductase YPD4_2914 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPD4_2914 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_2914 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_2914 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPD4_2914 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPD4_2914 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_2914 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPD4_2915 IPR001303 Class II aldolase/adducin N-terminal YPD4_2915 IPR004661 L-ribulose-5-phosphate 4-epimerase YPD4_2915 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPD4_2915 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPD4_2916 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPD4_2916 IPR037171 NagB/RpiA transferase-like YPD4_2916 IPR001034 DeoR-type HTH domain YPD4_2916 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2916 IPR014036 DeoR C-terminal sensor domain YPD4_2916 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2918 IPR015861 ABC transporter, ribose import, RbsA YPD4_2918 IPR003439 ABC transporter-like YPD4_2918 IPR003593 AAA+ ATPase domain YPD4_2918 IPR017871 ABC transporter, conserved site YPD4_2918 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2919 IPR001851 ABC transporter, permease YPD4_2920 IPR001851 ABC transporter, permease YPD4_2921 IPR001719 AP endonuclease 2 YPD4_2921 IPR004560 L-ribulose-5-phosphate 3-epimerase YPD4_2921 IPR036237 Xylose isomerase-like superfamily YPD4_2921 IPR013022 Xylose isomerase-like, TIM barrel domain YPD4_2922 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_2922 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_2922 IPR000577 Carbohydrate kinase, FGGY YPD4_2922 IPR018483 Carbohydrate kinase, FGGY, conserved site YPD4_2923 IPR011167 Iron-dependent fumarate hydratase YPD4_2923 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YPD4_2923 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YPD4_2923 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily YPD4_2923 IPR020557 Fumarate lyase, conserved site YPD4_2924 IPR000994 Peptidase M24 YPD4_2924 IPR036005 Creatinase/aminopeptidase-like YPD4_2924 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPD4_2924 IPR001714 Peptidase M24, methionine aminopeptidase YPD4_2927 IPR039426 Vitamin B12 transporter BtuB-like YPD4_2927 IPR010917 TonB-dependent receptor, conserved site YPD4_2927 IPR010916 TonB box, conserved site YPD4_2927 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_2927 IPR012910 TonB-dependent receptor, plug domain YPD4_2927 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_2927 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_2930 IPR018313 Solute-binding protein family 3, conserved site YPD4_2930 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_2930 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPD4_2931 IPR011991 ArsR-like helix-turn-helix domain YPD4_2931 IPR001845 HTH ArsR-type DNA-binding domain YPD4_2931 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2931 IPR018334 ArsR-type transcription regulator, HTH motif YPD4_2931 IPR036390 Winged helix DNA-binding domain superfamily YPD4_2932 IPR000802 Arsenical pump membrane protein, ArsB YPD4_2933 IPR007324 Sugar-binding domain, putative YPD4_2933 IPR009057 Homeobox-like domain superfamily YPD4_2933 IPR037171 NagB/RpiA transferase-like YPD4_2933 IPR025246 Transposase IS30-like HTH domain YPD4_2933 IPR011991 ArsR-like helix-turn-helix domain YPD4_2934 IPR036117 DhaL domain superfamily YPD4_2934 IPR004007 DhaL domain YPD4_2934 IPR012737 Dihydroxyacetone kinase, subunit L YPD4_2935 IPR004006 DhaK domain YPD4_2936 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPD4_2936 IPR002347 Short-chain dehydrogenase/reductase SDR YPD4_2936 IPR036291 NAD(P)-binding domain superfamily YPD4_2937 IPR020843 Polyketide synthase, enoylreductase domain YPD4_2937 IPR036291 NAD(P)-binding domain superfamily YPD4_2937 IPR013149 Alcohol dehydrogenase, C-terminal YPD4_2937 IPR013154 Alcohol dehydrogenase, N-terminal YPD4_2937 IPR011032 GroES-like superfamily YPD4_2938 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily YPD4_2938 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPD4_2938 IPR004785 Ribose 5-phosphate isomerase B YPD4_2939 IPR007861 DNA mismatch repair protein MutS, clamp YPD4_2939 IPR007696 DNA mismatch repair protein MutS, core YPD4_2939 IPR000432 DNA mismatch repair protein MutS, C-terminal YPD4_2939 IPR017261 DNA mismatch repair protein MutS/MSH YPD4_2939 IPR036187 DNA mismatch repair protein MutS, core domain superfamily YPD4_2939 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YPD4_2939 IPR005748 DNA mismatch repair protein MutS YPD4_2939 IPR007860 DNA mismatch repair protein MutS, connector domain YPD4_2939 IPR036678 MutS, connector domain superfamily YPD4_2939 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2939 IPR016151 DNA mismatch repair protein MutS, N-terminal YPD4_2940 IPR013325 RNA polymerase sigma factor, region 2 YPD4_2940 IPR013324 RNA polymerase sigma factor, region 3/4-like YPD4_2940 IPR009042 RNA polymerase sigma-70 region 1.2 YPD4_2940 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_2940 IPR007630 RNA polymerase sigma-70 region 4 YPD4_2940 IPR014284 RNA polymerase sigma-70 like domain YPD4_2940 IPR000943 RNA polymerase sigma-70 YPD4_2940 IPR007624 RNA polymerase sigma-70 region 3 YPD4_2940 IPR007627 RNA polymerase sigma-70 region 2 YPD4_2940 IPR012761 RNA polymerase sigma factor RpoS YPD4_2941 IPR036779 LysM domain superfamily YPD4_2941 IPR018392 LysM domain YPD4_2941 IPR011055 Duplicated hybrid motif YPD4_2941 IPR016047 Peptidase M23 YPD4_2942 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2942 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YPD4_2943 IPR030048 Survival protein SurE YPD4_2943 IPR036523 SurE-like phosphatase/nucleotidase superfamily YPD4_2943 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YPD4_2944 IPR020119 Pseudouridine synthase TruD, conserved site YPD4_2944 IPR001656 Pseudouridine synthase, TruD YPD4_2944 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_2944 IPR042214 Pseudouridine synthase, TruD, catalytic domain YPD4_2944 IPR011760 Pseudouridine synthase, TruD, insertion domain YPD4_2945 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YPD4_2945 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YPD4_2945 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily YPD4_2946 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YPD4_2946 IPR034683 Cytidylyltransferase IspD/TarI YPD4_2946 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_2946 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPD4_2947 IPR007060 Septum formation initiator FtsL/DivIC YPD4_2947 IPR023081 Cell division protein FtsB YPD4_2948 IPR022721 Protein of unknown function DUF3561 YPD4_2949 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2949 IPR002891 Adenylyl-sulfate kinase YPD4_2950 IPR011779 Sulphate adenylyltransferase, large subunit YPD4_2950 IPR031157 Tr-type G domain, conserved site YPD4_2950 IPR000795 Transcription factor, GTP-binding domain YPD4_2950 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_2950 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPD4_2950 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain YPD4_2950 IPR005225 Small GTP-binding protein domain YPD4_2950 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2951 IPR011784 Sulphate adenylyltransferase, small subunit YPD4_2951 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2951 IPR002500 Phosphoadenosine phosphosulphate reductase YPD4_2952 IPR035996 Tetrapyrrole methylase superfamily YPD4_2952 IPR019478 Sirohaem synthase, dimerisation domain YPD4_2952 IPR006367 Sirohaem synthase, N-terminal YPD4_2952 IPR014777 Tetrapyrrole methylase, subdomain 1 YPD4_2952 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPD4_2952 IPR012409 Sirohaem synthase YPD4_2952 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPD4_2952 IPR036291 NAD(P)-binding domain superfamily YPD4_2952 IPR006366 Uroporphyrin-III C-methyltransferase YPD4_2952 IPR014776 Tetrapyrrole methylase, subdomain 2 YPD4_2952 IPR000878 Tetrapyrrole methylase YPD4_2952 IPR028281 Siroheme synthase, central domain YPD4_2954 IPR011800 Phosphoadenosine phosphosulphate reductase CysH YPD4_2954 IPR002500 Phosphoadenosine phosphosulphate reductase YPD4_2954 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2954 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase YPD4_2955 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YPD4_2955 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPD4_2955 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPD4_2955 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPD4_2955 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPD4_2956 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_2956 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_2956 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding YPD4_2956 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_2956 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPD4_2956 IPR029039 Flavoprotein-like superfamily YPD4_2956 IPR008254 Flavodoxin/nitric oxide synthase YPD4_2956 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YPD4_2956 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily YPD4_2956 IPR017938 Riboflavin synthase-like beta-barrel YPD4_2956 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YPD4_2956 IPR001094 Flavodoxin-like YPD4_2957 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family YPD4_2957 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily YPD4_2958 IPR013785 Aldolase-type TIM barrel YPD4_2958 IPR007197 Radical SAM YPD4_2958 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YPD4_2958 IPR024924 7-carboxy-7-deazaguanine synthase-like YPD4_2959 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily YPD4_2959 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone YPD4_2959 IPR018152 Superoxide dismutase, copper/zinc, binding site YPD4_2959 IPR001424 Superoxide dismutase, copper/zinc binding domain YPD4_2960 IPR029017 Enolase-like, N-terminal YPD4_2960 IPR020811 Enolase, N-terminal YPD4_2960 IPR000941 Enolase YPD4_2960 IPR020810 Enolase, C-terminal TIM barrel domain YPD4_2960 IPR020809 Enolase, conserved site YPD4_2960 IPR036849 Enolase-like, C-terminal domain superfamily YPD4_2961 IPR017456 CTP synthase, N-terminal YPD4_2961 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2961 IPR004468 CTP synthase YPD4_2961 IPR017926 Glutamine amidotransferase YPD4_2961 IPR029062 Class I glutamine amidotransferase-like YPD4_2961 IPR033828 CTP synthase GATase domain YPD4_2962 IPR011551 NTP pyrophosphohydrolase MazG YPD4_2962 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPD4_2963 IPR033655 RelA, TGS domain YPD4_2963 IPR012675 Beta-grasp domain superfamily YPD4_2963 IPR003607 HD/PDEase domain YPD4_2963 IPR004095 TGS YPD4_2963 IPR012676 TGS-like YPD4_2963 IPR002912 ACT domain YPD4_2963 IPR007685 RelA/SpoT YPD4_2963 IPR004811 RelA/SpoT family YPD4_2964 IPR003660 HAMP domain YPD4_2964 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPD4_2964 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_2964 IPR011006 CheY-like superfamily YPD4_2964 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_2964 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_2964 IPR005467 Histidine kinase domain YPD4_2964 IPR036641 HPT domain superfamily YPD4_2964 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_2964 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_2964 IPR001789 Signal transduction response regulator, receiver domain YPD4_2964 IPR019247 Histidine kinase BarA, N-terminal YPD4_2965 IPR036034 PDZ superfamily YPD4_2965 IPR001940 Peptidase S1C YPD4_2965 IPR009003 Peptidase S1, PA clan YPD4_2965 IPR001478 PDZ domain YPD4_2965 IPR011782 Peptidase S1C, Do YPD4_2966 IPR001940 Peptidase S1C YPD4_2966 IPR009003 Peptidase S1, PA clan YPD4_2966 IPR036034 PDZ superfamily YPD4_2966 IPR001478 PDZ domain YPD4_2966 IPR011782 Peptidase S1C, Do YPD4_2967 IPR006261 dNTP triphosphohydrolase YPD4_2967 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily YPD4_2967 IPR026875 Phosphohydrolase-associated domain YPD4_2967 IPR006674 HD domain YPD4_2967 IPR003607 HD/PDEase domain YPD4_2967 IPR020779 dNTP triphosphohydrolase, type 1 YPD4_2968 IPR010049 MTA/SAH nucleosidase YPD4_2968 IPR000845 Nucleoside phosphorylase domain YPD4_2968 IPR035994 Nucleoside phosphorylase superfamily YPD4_2969 IPR023544 ABC transporter, vitamin B12-binding protein YPD4_2969 IPR002491 ABC transporter periplasmic binding domain YPD4_2970 IPR005115 Uncharacterised domain UPF0126 YPD4_2971 IPR000361 FeS cluster biogenesis YPD4_2971 IPR016092 FeS cluster insertion protein YPD4_2971 IPR023063 FeS cluster insertion protein ErpA YPD4_2971 IPR035903 HesB-like domain superfamily YPD4_2971 IPR017870 FeS cluster insertion, C-terminal, conserved site YPD4_2972 IPR001807 Chloride channel, voltage gated YPD4_2972 IPR023861 Chloride channel, ClcA YPD4_2972 IPR014743 Chloride channel, core YPD4_2973 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_2973 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_2973 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YPD4_2973 IPR005814 Aminotransferase class-III YPD4_2973 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_2974 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_2974 IPR037294 ABC transporter, BtuC-like YPD4_2975 IPR002491 ABC transporter periplasmic binding domain YPD4_2976 IPR003593 AAA+ ATPase domain YPD4_2976 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2976 IPR003439 ABC transporter-like YPD4_2976 IPR017871 ABC transporter, conserved site YPD4_2977 IPR023346 Lysozyme-like domain superfamily YPD4_2977 IPR001264 Glycosyl transferase, family 51 YPD4_2977 IPR012338 Beta-lactamase/transpeptidase-like YPD4_2977 IPR011813 Penicillin-binding protein 1B YPD4_2977 IPR028166 Bifunctional transglycosylase second domain YPD4_2977 IPR001460 Penicillin-binding protein, transpeptidase YPD4_2977 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YPD4_2977 IPR036950 Penicillin binding protein transglycosylase domain YPD4_2978 IPR001650 Helicase, C-terminal YPD4_2978 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2978 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YPD4_2978 IPR010225 ATP-dependent helicase HrpB YPD4_2978 IPR007502 Helicase-associated domain YPD4_2978 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_2978 IPR011545 DEAD/DEAH box helicase domain YPD4_2979 IPR009097 Cyclic phosphodiesterase YPD4_2979 IPR014051 Phosphoesterase, HXTX YPD4_2979 IPR004175 RNA 2',3'-cyclic phosphodiesterase YPD4_2980 IPR005224 Sugar fermentation stimulation protein YPD4_2980 IPR040452 Sugar fermentation stimulation protein, C-terminal YPD4_2980 IPR041465 SfsA, N-terminal OB domain YPD4_2981 IPR012784 RNA polymerase-binding transcription factor DksA YPD4_2981 IPR000962 Zinc finger, DksA/TraR C4-type YPD4_2981 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPD4_2981 IPR037187 DksA, N-terminal domain superfamily YPD4_2981 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPD4_2982 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2982 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPD4_2982 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YPD4_2982 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPD4_2983 IPR025866 Polymerase A arginine-rich C-terminal domain YPD4_2983 IPR010206 Poly(A) polymerase I YPD4_2983 IPR002646 Poly A polymerase, head domain YPD4_2983 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPD4_2984 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YPD4_2984 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily YPD4_2985 IPR040442 Pyruvate kinase-like domain superfamily YPD4_2985 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_2985 IPR003700 Ketopantoate hydroxymethyltransferase YPD4_2986 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_2986 IPR003721 Pantoate-beta-alanine ligase YPD4_2986 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain YPD4_2987 IPR003190 Aspartate decarboxylase YPD4_2987 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_2988 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPD4_2988 IPR002509 NodB homology domain YPD4_2989 IPR000412 ABC-2 transporter YPD4_2989 IPR013525 ABC-2 type transporter YPD4_2990 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_2990 IPR017871 ABC transporter, conserved site YPD4_2990 IPR003593 AAA+ ATPase domain YPD4_2990 IPR003439 ABC transporter-like YPD4_2991 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPD4_2991 IPR001765 Carbonic anhydrase YPD4_2991 IPR036874 Carbonic anhydrase superfamily YPD4_2992 IPR000836 Phosphoribosyltransferase domain YPD4_2992 IPR005904 Hypoxanthine phosphoribosyl transferase YPD4_2992 IPR029057 Phosphoribosyltransferase-like YPD4_2993 IPR011706 Multicopper oxidase, type 2 YPD4_2993 IPR001117 Multicopper oxidase, type 1 YPD4_2993 IPR011707 Multicopper oxidase, type 3 YPD4_2993 IPR008972 Cupredoxin YPD4_2993 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_2993 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPD4_2993 IPR002355 Multicopper oxidase, copper-binding site YPD4_2994 IPR038432 PulS/OutS-like superfamily YPD4_2994 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPD4_2995 IPR030374 Polyamine biosynthesis domain YPD4_2995 IPR030373 Polyamine biosynthesis domain, conserved site YPD4_2995 IPR037163 Spermidine synthase, tetramerisation domain superfamily YPD4_2995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_2995 IPR035246 Spermidine synthase, tetramerisation domain YPD4_2995 IPR001045 Spermidine/spermine synthases YPD4_2996 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YPD4_2996 IPR009165 S-adenosylmethionine decarboxylase, bacterial YPD4_2996 IPR016067 S-adenosylmethionine decarboxylase, core YPD4_2997 IPR000620 EamA domain YPD4_2998 IPR008249 Uncharacterised protein family UPF0231 YPD4_2999 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPD4_2999 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPD4_2999 IPR015929 Aconitase B, swivel YPD4_2999 IPR036008 Aconitase, iron-sulfur domain YPD4_2999 IPR004406 Aconitase B YPD4_2999 IPR015933 Aconitase B, HEAT-like domain YPD4_2999 IPR036288 Aconitase B, HEAT-like domain superfamily YPD4_2999 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPD4_2999 IPR015932 Aconitase, domain 2 YPD4_2999 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPD4_3001 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPD4_3001 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPD4_3001 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3001 IPR006258 Dihydrolipoamide dehydrogenase YPD4_3001 IPR023753 FAD/NAD(P)-binding domain YPD4_3001 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPD4_3001 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPD4_3002 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPD4_3002 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YPD4_3002 IPR000089 Biotin/lipoyl attachment YPD4_3002 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPD4_3002 IPR036625 E3-binding domain superfamily YPD4_3002 IPR004167 Peripheral subunit-binding domain YPD4_3002 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPD4_3002 IPR011053 Single hybrid motif YPD4_3003 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPD4_3003 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal YPD4_3003 IPR004660 Pyruvate dehydrogenase E1 component YPD4_3003 IPR041621 Pyruvate dehydrogenase E1 component, middle domain YPD4_3003 IPR029061 Thiamin diphosphate-binding fold YPD4_3003 IPR005474 Transketolase, N-terminal YPD4_3004 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3004 IPR000524 Transcription regulator HTH, GntR YPD4_3004 IPR008920 Transcription regulator FadR/GntR, C-terminal YPD4_3004 IPR011711 GntR, C-terminal YPD4_3004 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3005 IPR004841 Amino acid permease/ SLC12A domain YPD4_3005 IPR004840 Amino acid permease, conserved site YPD4_3006 IPR031347 Protein AmpE YPD4_3007 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPD4_3007 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPD4_3008 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YPD4_3008 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPD4_3008 IPR004393 Nicotinate-nucleotide pyrophosphorylase YPD4_3008 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily YPD4_3008 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPD4_3008 IPR013785 Aldolase-type TIM barrel YPD4_3008 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPD4_3009 IPR012902 Prokaryotic N-terminal methylation site YPD4_3010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3010 IPR001482 Type II/IV secretion system protein YPD4_3010 IPR007831 General secretory system II, protein E, N-terminal YPD4_3011 IPR003004 GspF/PilC family YPD4_3011 IPR001992 Type II secretion system conserved site YPD4_3011 IPR018076 Type II secretion system F domain YPD4_3011 IPR042094 Type II secretion system F domain superfamily YPD4_3012 IPR013785 Aldolase-type TIM barrel YPD4_3012 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPD4_3012 IPR001093 IMP dehydrogenase/GMP reductase YPD4_3012 IPR005993 GMP reductase YPD4_3013 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3013 IPR001977 Dephospho-CoA kinase YPD4_3014 IPR027462 Z ring-associated protein D, C-terminal YPD4_3014 IPR009777 Cell division protein ZapD YPD4_3014 IPR036268 ZapD domain superfamily YPD4_3016 IPR017894 HTH domain, IS21 transposase-type YPD4_3016 IPR036397 Ribonuclease H superfamily YPD4_3016 IPR012337 Ribonuclease H-like superfamily YPD4_3016 IPR006120 Resolvase, HTH domain YPD4_3016 IPR001584 Integrase, catalytic core YPD4_3017 IPR002611 IstB-like ATP-binding protein YPD4_3017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_3017 IPR003593 AAA+ ATPase domain YPD4_3017 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3017 IPR001270 ClpA/B family YPD4_3018 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms YPD4_3018 IPR014762 DNA mismatch repair, conserved site YPD4_3018 IPR042121 MutL, C-terminal domain, regulatory subdomain YPD4_3018 IPR037198 MutL, C-terminal domain superfamily YPD4_3018 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_3018 IPR020667 DNA mismatch repair protein, MutL YPD4_3018 IPR014790 MutL, C-terminal, dimerisation YPD4_3018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3018 IPR042120 MutL, C-terminal domain, dimerisation subdomain YPD4_3018 IPR002099 DNA mismatch repair protein family, N-terminal YPD4_3018 IPR013507 DNA mismatch repair protein, S5 domain 2-like YPD4_3018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_3020 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_3020 IPR013762 Integrase-like, catalytic domain superfamily YPD4_3020 IPR002104 Integrase, catalytic domain YPD4_3020 IPR038488 Integrase, DNA-binding domain superfamily YPD4_3020 IPR025166 Integrase, DNA-binding domain YPD4_3020 IPR010998 Integrase/recombinase, N-terminal YPD4_3021 IPR005495 Permease LptG/LptF-related YPD4_3021 IPR030923 LPS export ABC transporter permease LptG YPD4_3022 IPR030922 LPS export ABC transporter permease LptF YPD4_3022 IPR005495 Permease LptG/LptF-related YPD4_3023 IPR030922 LPS export ABC transporter permease LptF YPD4_3023 IPR005495 Permease LptG/LptF-related YPD4_3024 IPR023042 Peptidase M17, leucine aminopeptidase YPD4_3024 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPD4_3024 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPD4_3024 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YPD4_3025 IPR007459 DNA polymerase III chi subunit, HolC YPD4_3025 IPR036768 DNA polymerase III subunit chi superfamily YPD4_3026 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPD4_3026 IPR002303 Valine-tRNA ligase YPD4_3026 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YPD4_3026 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPD4_3026 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPD4_3026 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPD4_3026 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_3026 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPD4_3026 IPR033705 Valyl tRNA synthetase, anticodon-binding domain YPD4_3026 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPD4_3026 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPD4_3027 IPR016181 Acyl-CoA N-acyltransferase YPD4_3027 IPR000182 GNAT domain YPD4_3028 IPR036701 RraB-like superfamily YPD4_3028 IPR009671 Regulator of ribonuclease activity B domain YPD4_3028 IPR016716 Regulator of ribonuclease activity B YPD4_3029 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPD4_3029 IPR006130 Aspartate/ornithine carbamoyltransferase YPD4_3029 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPD4_3029 IPR002292 Ornithine/putrescine carbamoyltransferase YPD4_3029 IPR024904 Ornithine carbamoyltransferase YPD4_3029 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPD4_3030 IPR004375 YhcH/YjgK/YiaL family YPD4_3030 IPR037012 YhcH/YjgK/YiaL superfamily YPD4_3033 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3033 IPR035906 MetI-like superfamily YPD4_3034 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPD4_3034 IPR035906 MetI-like superfamily YPD4_3034 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3035 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_3035 IPR017871 ABC transporter, conserved site YPD4_3035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3035 IPR003439 ABC transporter-like YPD4_3035 IPR003593 AAA+ ATPase domain YPD4_3036 IPR003439 ABC transporter-like YPD4_3036 IPR003593 AAA+ ATPase domain YPD4_3036 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3036 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_3036 IPR017871 ABC transporter, conserved site YPD4_3037 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YPD4_3037 IPR001150 Glycine radical domain YPD4_3037 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPD4_3037 IPR005144 ATP-cone domain YPD4_3038 IPR001989 Radical-activating enzyme, conserved site YPD4_3038 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YPD4_3038 IPR034457 Organic radical-activating enzymes YPD4_3038 IPR013785 Aldolase-type TIM barrel YPD4_3039 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPD4_3039 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3039 IPR011663 UbiC transcription regulator-associated YPD4_3039 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3039 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPD4_3039 IPR000524 Transcription regulator HTH, GntR YPD4_3040 IPR009609 Phosphonate metabolism PhnG YPD4_3041 IPR008772 Bacterial phosphonate metabolism, PhnH YPD4_3041 IPR038058 PhnH-like superfamily YPD4_3042 IPR008773 Phosphonate metabolism protein PhnI YPD4_3043 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase YPD4_3044 IPR003439 ABC transporter-like YPD4_3044 IPR003593 AAA+ ATPase domain YPD4_3044 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3044 IPR012700 Phosphonate C-P lyase system, PhnK YPD4_3044 IPR017871 ABC transporter, conserved site YPD4_3045 IPR003593 AAA+ ATPase domain YPD4_3045 IPR003439 ABC transporter-like YPD4_3045 IPR017871 ABC transporter, conserved site YPD4_3045 IPR012701 Phosphonate C-P lyase system, PhnL YPD4_3045 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3046 IPR032466 Metal-dependent hydrolase YPD4_3046 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPD4_3046 IPR013108 Amidohydrolase 3 YPD4_3046 IPR012696 Phosphonate metabolism PhnM YPD4_3047 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YPD4_3047 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3047 IPR008144 Guanylate kinase-like domain YPD4_3047 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPD4_3048 IPR017693 Phosphonate metabolism protein PhnP YPD4_3048 IPR001279 Metallo-beta-lactamase YPD4_3048 IPR035682 Phosphonate metabolism protein, MBL domain YPD4_3048 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPD4_3049 IPR016040 NAD(P)-binding domain YPD4_3049 IPR036291 NAD(P)-binding domain superfamily YPD4_3049 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPD4_3050 IPR012349 FMN-binding split barrel YPD4_3050 IPR011194 Uncharacterised protein family UPF0306 YPD4_3052 IPR003439 ABC transporter-like YPD4_3052 IPR017871 ABC transporter, conserved site YPD4_3052 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_3052 IPR040582 MalK, OB fold domain YPD4_3052 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3052 IPR005116 Transport-associated OB, type 1 YPD4_3052 IPR003593 AAA+ ATPase domain YPD4_3053 IPR035906 MetI-like superfamily YPD4_3053 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3055 IPR006059 Bacterial extracellular solute-binding protein YPD4_3058 IPR016181 Acyl-CoA N-acyltransferase YPD4_3058 IPR000182 GNAT domain YPD4_3062 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YPD4_3062 IPR003423 Outer membrane efflux protein YPD4_3062 IPR012640 Membrane lipoprotein, lipid attachment site YPD4_3063 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPD4_3063 IPR001036 Acriflavin resistance protein YPD4_3063 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPD4_3064 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPD4_3064 IPR006143 RND efflux pump, membrane fusion protein YPD4_3065 IPR019949 Luciferase family oxidoreductase, group 1 YPD4_3065 IPR011251 Luciferase-like domain YPD4_3065 IPR036661 Luciferase-like domain superfamily YPD4_3066 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_3066 IPR001387 Cro/C1-type helix-turn-helix domain YPD4_3067 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPD4_3067 IPR021046 Cold-shock protein, DEAD box A, C-terminal YPD4_3067 IPR034415 CsdA, RNA recognition motif YPD4_3067 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPD4_3067 IPR011545 DEAD/DEAH box helicase domain YPD4_3067 IPR028618 ATP-dependent RNA helicase DeaD YPD4_3067 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_3067 IPR001650 Helicase, C-terminal YPD4_3067 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPD4_3067 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3067 IPR014014 RNA helicase, DEAD-box type, Q motif YPD4_3068 IPR013105 Tetratricopeptide repeat 2 YPD4_3068 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_3068 IPR019734 Tetratricopeptide repeat YPD4_3068 IPR013026 Tetratricopeptide repeat-containing domain YPD4_3068 IPR023605 Lipoprotein NlpI YPD4_3069 IPR022967 RNA-binding domain, S1 YPD4_3069 IPR003029 S1 domain YPD4_3069 IPR012340 Nucleic acid-binding, OB-fold YPD4_3069 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_3069 IPR036612 K Homology domain, type 1 superfamily YPD4_3069 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YPD4_3069 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPD4_3069 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPD4_3069 IPR036345 Exoribonuclease, PH domain 2 superfamily YPD4_3069 IPR004087 K Homology domain YPD4_3069 IPR027408 PNPase/RNase PH domain superfamily YPD4_3069 IPR012162 Polyribonucleotide nucleotidyltransferase YPD4_3069 IPR004088 K Homology domain, type 1 YPD4_3069 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily YPD4_3070 IPR025948 HTH-like domain YPD4_3070 IPR038965 Transposase InsF-like YPD4_3070 IPR001584 Integrase, catalytic core YPD4_3070 IPR012337 Ribonuclease H-like superfamily YPD4_3070 IPR036397 Ribonuclease H superfamily YPD4_3078 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3078 IPR036628 Clp, N-terminal domain superfamily YPD4_3078 IPR004176 Clp, N-terminal YPD4_3078 IPR003959 ATPase, AAA-type, core YPD4_3078 IPR017729 Type VI secretion system, ATPase ClpV1 YPD4_3078 IPR041546 ClpA/ClpB, AAA lid domain YPD4_3078 IPR019489 Clp ATPase, C-terminal YPD4_3078 IPR018368 ClpA/B, conserved site 1 YPD4_3078 IPR001270 ClpA/B family YPD4_3078 IPR003593 AAA+ ATPase domain YPD4_3085 IPR006531 Gp5 N-terminal YPD4_3085 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPD4_3085 IPR037026 Vgr protein, OB-fold domain superfamily YPD4_3085 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPD4_3088 IPR006530 YD repeat YPD4_3088 IPR025479 Domain of unknown function DUF4329 YPD4_3088 IPR001826 RHS protein YPD4_3088 IPR022385 Rhs repeat-associated core YPD4_3088 IPR031325 RHS repeat YPD4_3091 IPR037026 Vgr protein, OB-fold domain superfamily YPD4_3091 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPD4_3091 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPD4_3091 IPR006531 Gp5 N-terminal YPD4_3093 IPR001826 RHS protein YPD4_3093 IPR031325 RHS repeat YPD4_3093 IPR022385 Rhs repeat-associated core YPD4_3093 IPR006530 YD repeat YPD4_3096 IPR000683 Oxidoreductase, N-terminal YPD4_3096 IPR004104 Oxidoreductase, C-terminal YPD4_3096 IPR036291 NAD(P)-binding domain superfamily YPD4_3097 IPR003313 AraC-type arabinose-binding/dimerisation domain YPD4_3097 IPR009057 Homeobox-like domain superfamily YPD4_3097 IPR018060 DNA binding HTH domain, AraC-type YPD4_3097 IPR011051 RmlC-like cupin domain superfamily YPD4_3097 IPR014710 RmlC-like jelly roll fold YPD4_3098 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPD4_3098 IPR023064 D-ribose pyranase YPD4_3098 IPR023750 RbsD-like superfamily YPD4_3099 IPR011611 Carbohydrate kinase PfkB YPD4_3099 IPR029056 Ribokinase-like YPD4_3099 IPR002139 Ribokinase/fructokinase YPD4_3099 IPR011877 Ribokinase YPD4_3099 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_3101 IPR029039 Flavoprotein-like superfamily YPD4_3101 IPR005025 NADPH-dependent FMN reductase-like YPD4_3101 IPR020048 NADPH-dependent FMN reductase, SsuE YPD4_3102 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_3102 IPR010067 Aliphatic sulfonates-binding protein YPD4_3102 IPR015168 SsuA/THI5-like YPD4_3103 IPR011251 Luciferase-like domain YPD4_3103 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YPD4_3103 IPR036661 Luciferase-like domain superfamily YPD4_3104 IPR035906 MetI-like superfamily YPD4_3104 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3105 IPR003593 AAA+ ATPase domain YPD4_3105 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB YPD4_3105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3105 IPR017871 ABC transporter, conserved site YPD4_3105 IPR003439 ABC transporter-like YPD4_3106 IPR006043 Xanthine/uracil/vitamin C permease YPD4_3107 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YPD4_3107 IPR006153 Cation/H+ exchanger YPD4_3107 IPR038770 Sodium/solute symporter superfamily YPD4_3107 IPR018422 Cation/H+ exchanger, CPA1 family YPD4_3109 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPD4_3109 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP YPD4_3109 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPD4_3111 IPR003439 ABC transporter-like YPD4_3111 IPR003593 AAA+ ATPase domain YPD4_3111 IPR017871 ABC transporter, conserved site YPD4_3111 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3111 IPR015861 ABC transporter, ribose import, RbsA YPD4_3112 IPR001851 ABC transporter, permease YPD4_3114 IPR000577 Carbohydrate kinase, FGGY YPD4_3114 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_3114 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_3114 IPR005929 Ribulokinase YPD4_3115 IPR035474 KpsF-like, SIS domain YPD4_3115 IPR000644 CBS domain YPD4_3115 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPD4_3115 IPR001347 Sugar isomerase (SIS) YPD4_3116 IPR036249 Thioredoxin-like superfamily YPD4_3116 IPR040079 Glutathione Transferase family YPD4_3116 IPR004045 Glutathione S-transferase, N-terminal YPD4_3116 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPD4_3116 IPR010987 Glutathione S-transferase, C-terminal-like YPD4_3120 IPR008816 Glycine zipper 2TM domain YPD4_3121 IPR001279 Metallo-beta-lactamase YPD4_3121 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPD4_3122 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPD4_3122 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_3122 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YPD4_3122 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_3122 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YPD4_3122 IPR015815 3-hydroxyisobutyrate dehydrogenase-related YPD4_3122 IPR036291 NAD(P)-binding domain superfamily YPD4_3123 IPR012788 4-carboxymuconolactone decarboxylase YPD4_3123 IPR029032 AhpD-like YPD4_3123 IPR003779 Carboxymuconolactone decarboxylase-like YPD4_3124 IPR011701 Major facilitator superfamily YPD4_3124 IPR020846 Major facilitator superfamily domain YPD4_3124 IPR036259 MFS transporter superfamily YPD4_3124 IPR004736 MFS transporter, metabolite:H symporter YPD4_3124 IPR005829 Sugar transporter, conserved site YPD4_3125 IPR005828 Major facilitator, sugar transporter-like YPD4_3125 IPR005829 Sugar transporter, conserved site YPD4_3125 IPR020846 Major facilitator superfamily domain YPD4_3125 IPR004736 MFS transporter, metabolite:H symporter YPD4_3125 IPR036259 MFS transporter superfamily YPD4_3128 IPR013785 Aldolase-type TIM barrel YPD4_3128 IPR035587 DUS-like, FMN-binding domain YPD4_3128 IPR032887 tRNA-dihydrouridine synthase B YPD4_3128 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YPD4_3128 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YPD4_3128 IPR001269 tRNA-dihydrouridine synthase YPD4_3128 IPR018517 tRNA-dihydrouridine synthase, conserved site YPD4_3129 IPR004498 Ribosomal protein L11 methyltransferase YPD4_3129 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3130 IPR018212 Sodium/solute symporter, conserved site YPD4_3130 IPR001734 Sodium/solute symporter YPD4_3130 IPR011849 Sodium/pantothenate symporter YPD4_3130 IPR038377 Sodium/glucose symporter superfamily YPD4_3131 IPR013815 ATP-grasp fold, subdomain 1 YPD4_3131 IPR011054 Rudiment single hybrid motif YPD4_3131 IPR011761 ATP-grasp fold YPD4_3131 IPR011764 Biotin carboxylation domain YPD4_3131 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YPD4_3131 IPR005481 Biotin carboxylase-like, N-terminal domain YPD4_3131 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPD4_3131 IPR016185 Pre-ATP-grasp domain superfamily YPD4_3131 IPR005482 Biotin carboxylase, C-terminal YPD4_3132 IPR011053 Single hybrid motif YPD4_3132 IPR001249 Acetyl-CoA biotin carboxyl carrier YPD4_3132 IPR001882 Biotin-binding site YPD4_3132 IPR000089 Biotin/lipoyl attachment YPD4_3133 IPR001874 Dehydroquinase, class II YPD4_3133 IPR018509 Dehydroquinase, class II, conserved site YPD4_3133 IPR036441 Dehydroquinase, class II superfamily YPD4_3134 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ YPD4_3134 IPR013130 Ferric reductase transmembrane component-like domain YPD4_3135 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily YPD4_3135 IPR000572 Oxidoreductase, molybdopterin-binding domain YPD4_3135 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP YPD4_3136 IPR013149 Alcohol dehydrogenase, C-terminal YPD4_3136 IPR013154 Alcohol dehydrogenase, N-terminal YPD4_3136 IPR014188 Acrylyl-CoA reductase AcuI YPD4_3136 IPR020843 Polyketide synthase, enoylreductase domain YPD4_3136 IPR036291 NAD(P)-binding domain superfamily YPD4_3136 IPR011032 GroES-like superfamily YPD4_3137 IPR029787 Nucleotide cyclase YPD4_3137 IPR000160 GGDEF domain YPD4_3137 IPR035919 EAL domain superfamily YPD4_3137 IPR001633 EAL domain YPD4_3137 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YPD4_3138 IPR004753 Cell shape determining protein MreB YPD4_3139 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 YPD4_3139 IPR007221 Rod shape-determining protein MreC YPD4_3139 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 YPD4_3140 IPR007227 Cell shape-determining protein MreD YPD4_3140 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPD4_3141 IPR029001 Inosine triphosphate pyrophosphatase-like YPD4_3141 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPD4_3142 IPR003029 S1 domain YPD4_3142 IPR004659 Ribonuclease E/G YPD4_3142 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPD4_3142 IPR012340 Nucleic acid-binding, OB-fold YPD4_3142 IPR022967 RNA-binding domain, S1 YPD4_3143 IPR011836 Conserved hypothetical protein CHP02099 YPD4_3143 IPR032712 AsmA-like, C-terminal YPD4_3143 IPR025263 Domain of unknown function DUF3971 YPD4_3144 IPR003010 Carbon-nitrogen hydrolase YPD4_3144 IPR001110 Uncharacterised protein family UPF0012, conserved site YPD4_3144 IPR036526 Carbon-nitrogen hydrolase superfamily YPD4_3145 IPR025502 TldD YPD4_3145 IPR036059 Metalloprotease TldD/PmbA superfamily YPD4_3145 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPD4_3145 IPR002510 Metalloprotease TldD/PmbA YPD4_3146 IPR025968 YwqJ-like deaminase YPD4_3146 IPR041508 Toxin complex C-like repeat YPD4_3146 IPR022385 Rhs repeat-associated core YPD4_3147 IPR041508 Toxin complex C-like repeat YPD4_3147 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily YPD4_3147 IPR022385 Rhs repeat-associated core YPD4_3147 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain YPD4_3147 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPD4_3151 IPR022044 Insecticide toxin TcdB middle/C-terminal YPD4_3151 IPR022045 Insecticide toxin TcdB middle/N-terminal YPD4_3151 IPR003284 Salmonella virulence plasmid 65kDa B protein YPD4_3152 IPR040840 Tc toxin complex TcA, C-terminal TcB-binding domain YPD4_3152 IPR041079 Neuraminidase-like domain YPD4_3156 IPR000847 Transcription regulator HTH, LysR YPD4_3156 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3156 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3156 IPR005119 LysR, substrate-binding YPD4_3157 IPR006143 RND efflux pump, membrane fusion protein YPD4_3157 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPD4_3157 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPD4_3158 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPD4_3158 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YPD4_3159 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_3159 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPD4_3159 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_3159 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_3159 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_3159 IPR010102 Succinate semialdehyde dehydrogenase YPD4_3159 IPR015590 Aldehyde dehydrogenase domain YPD4_3160 IPR016161 Aldehyde/histidinol dehydrogenase YPD4_3160 IPR010102 Succinate semialdehyde dehydrogenase YPD4_3160 IPR016163 Aldehyde dehydrogenase, C-terminal YPD4_3160 IPR016162 Aldehyde dehydrogenase, N-terminal YPD4_3160 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPD4_3160 IPR016160 Aldehyde dehydrogenase, cysteine active site YPD4_3160 IPR015590 Aldehyde dehydrogenase domain YPD4_3162 IPR023153 PSPTO4464-like domain superfamily YPD4_3162 IPR006839 Ribosome-associated, YjgA YPD4_3163 IPR002510 Metalloprotease TldD/PmbA YPD4_3163 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPD4_3163 IPR036059 Metalloprotease TldD/PmbA superfamily YPD4_3165 IPR009155 Cytochrome b562 YPD4_3165 IPR010980 Cytochrome c/b562 YPD4_3166 IPR023459 Transcription elongation factor GreA/GreB family YPD4_3166 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPD4_3166 IPR028625 Regulator of nucleoside diphosphate kinase YPD4_3166 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPD4_3166 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPD4_3167 IPR012769 Trehalose-6-phosphate hydrolase YPD4_3167 IPR017853 Glycoside hydrolase superfamily YPD4_3167 IPR013780 Glycosyl hydrolase, all-beta YPD4_3167 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPD4_3167 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YPD4_3168 IPR036878 Glucose permease domain IIB YPD4_3168 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPD4_3168 IPR003352 Phosphotransferase system, EIIC YPD4_3168 IPR001996 Phosphotransferase system, IIB component, type 1 YPD4_3168 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YPD4_3168 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPD4_3168 IPR013013 Phosphotransferase system, EIIC component, type 1 YPD4_3169 IPR012771 Trehalose operon repressor YPD4_3169 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_3169 IPR000843 LacI-type HTH domain YPD4_3169 IPR028082 Periplasmic binding protein-like I YPD4_3171 IPR019897 RidA, conserved site YPD4_3171 IPR006056 RidA family YPD4_3171 IPR006175 YjgF/YER057c/UK114 family YPD4_3171 IPR035959 RutC-like superfamily YPD4_3172 IPR002801 Aspartate transcarbamylase regulatory subunit YPD4_3172 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily YPD4_3172 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPD4_3172 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPD4_3172 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily YPD4_3173 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPD4_3173 IPR002082 Aspartate carbamoyltransferase YPD4_3173 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPD4_3173 IPR006130 Aspartate/ornithine carbamoyltransferase YPD4_3173 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPD4_3174 IPR005337 RapZ-like family YPD4_3174 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3175 IPR002178 PTS EIIA type-2 domain YPD4_3175 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YPD4_3175 IPR016152 Phosphotransferase/anion transporter YPD4_3176 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPD4_3176 IPR007046 RNA polymerase sigma factor 54, core-binding domain YPD4_3176 IPR000394 RNA polymerase sigma factor 54 YPD4_3176 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily YPD4_3177 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3177 IPR003439 ABC transporter-like YPD4_3177 IPR030921 LPS export ABC transporter, ATP-binding protein LptB YPD4_3177 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPD4_3177 IPR017871 ABC transporter, conserved site YPD4_3177 IPR003593 AAA+ ATPase domain YPD4_3178 IPR005653 Organic solvent tolerance-like, N-terminal YPD4_3178 IPR014340 Lipopolysaccharide export system protein LptA YPD4_3179 IPR010664 Lipopolysaccharide assembly, LptC-related YPD4_3179 IPR026265 Lipopolysaccharide export system protein LptC YPD4_3180 IPR010023 KdsC family YPD4_3180 IPR023214 HAD superfamily YPD4_3180 IPR036412 HAD-like superfamily YPD4_3181 IPR035474 KpsF-like, SIS domain YPD4_3181 IPR000644 CBS domain YPD4_3181 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPD4_3181 IPR001347 Sugar isomerase (SIS) YPD4_3182 IPR004837 Sodium/calcium exchanger membrane region YPD4_3182 IPR004481 Sodium/potassium/calcium exchanger YPD4_3183 IPR017871 ABC transporter, conserved site YPD4_3183 IPR003439 ABC transporter-like YPD4_3183 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3183 IPR003593 AAA+ ATPase domain YPD4_3183 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl YPD4_3184 IPR030802 ABC transporter permease MalE YPD4_3184 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YPD4_3185 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD YPD4_3185 IPR003399 Mce/MlaD YPD4_3186 IPR042245 Tgt2/MlaC superfamily YPD4_3186 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPD4_3187 IPR036513 STAS domain superfamily YPD4_3187 IPR002645 STAS domain YPD4_3188 IPR001986 Enolpyruvate transferase domain YPD4_3188 IPR036968 Enolpyruvate transferase domain superfamily YPD4_3188 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPD4_3188 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPD4_3189 IPR001478 PDZ domain YPD4_3189 IPR036034 PDZ superfamily YPD4_3189 IPR011783 Peptidase S1C, DegS YPD4_3189 IPR001940 Peptidase S1C YPD4_3189 IPR009003 Peptidase S1, PA clan YPD4_3190 IPR002686 Transposase IS200-like YPD4_3190 IPR036515 Transposase IS200-like superfamily YPD4_3191 IPR011782 Peptidase S1C, Do YPD4_3191 IPR009003 Peptidase S1, PA clan YPD4_3191 IPR001478 PDZ domain YPD4_3191 IPR001940 Peptidase S1C YPD4_3191 IPR036034 PDZ superfamily YPD4_3192 IPR009386 Protein of unknown function DUF1043 YPD4_3193 IPR005654 ATPase, AFG1-like YPD4_3193 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3193 IPR030870 Cell division protein ZapE YPD4_3194 IPR023563 Ribosomal protein L13, conserved site YPD4_3194 IPR005823 Ribosomal protein L13, bacterial-type YPD4_3194 IPR005822 Ribosomal protein L13 YPD4_3194 IPR036899 Ribosomal protein L13 superfamily YPD4_3195 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_3195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_3195 IPR000754 Ribosomal protein S9 YPD4_3195 IPR023035 Ribosomal protein S9, bacterial/plastid YPD4_3195 IPR020574 Ribosomal protein S9, conserved site YPD4_3196 IPR010987 Glutathione S-transferase, C-terminal-like YPD4_3196 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPD4_3196 IPR040079 Glutathione Transferase family YPD4_3196 IPR004045 Glutathione S-transferase, N-terminal YPD4_3196 IPR004046 Glutathione S-transferase, C-terminal YPD4_3196 IPR034341 Stringent starvation protein A, N-terminal YPD4_3196 IPR036249 Thioredoxin-like superfamily YPD4_3197 IPR036760 SspB-like superfamily YPD4_3197 IPR007481 Stringent starvation protein B YPD4_3199 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_3199 IPR028261 Dihydroprymidine dehydrogenase domain II YPD4_3199 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3199 IPR009051 Alpha-helical ferredoxin YPD4_3199 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPD4_3199 IPR023753 FAD/NAD(P)-binding domain YPD4_3200 IPR006982 Glutamate synthase, central-N YPD4_3200 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily YPD4_3200 IPR029055 Nucleophile aminohydrolases, N-terminal YPD4_3200 IPR002932 Glutamate synthase domain YPD4_3200 IPR013785 Aldolase-type TIM barrel YPD4_3200 IPR017932 Glutamine amidotransferase type 2 domain YPD4_3200 IPR002489 Glutamate synthase, alpha subunit, C-terminal YPD4_3201 IPR007197 Radical SAM YPD4_3201 IPR039661 ELP3/YhcC YPD4_3201 IPR005911 Protein YhcC-like YPD4_3201 IPR032432 Radical SAM, C-terminal extension YPD4_3201 IPR023404 Radical SAM, alpha/beta horseshoe YPD4_3201 IPR006638 Elp3/MiaB/NifB YPD4_3202 IPR035965 PAS domain superfamily YPD4_3202 IPR013767 PAS fold YPD4_3202 IPR000014 PAS domain YPD4_3202 IPR036641 HPT domain superfamily YPD4_3202 IPR040642 Histidine kinase receptor ArcB, transmembrane domain YPD4_3202 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_3202 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YPD4_3202 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPD4_3202 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_3202 IPR011006 CheY-like superfamily YPD4_3202 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_3202 IPR005467 Histidine kinase domain YPD4_3202 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3202 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_3202 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily YPD4_3202 IPR000700 PAS-associated, C-terminal YPD4_3202 IPR001789 Signal transduction response regulator, receiver domain YPD4_3203 IPR026041 Glyoxalase ElbB YPD4_3203 IPR029062 Class I glutamine amidotransferase-like YPD4_3204 IPR001264 Glycosyl transferase, family 51 YPD4_3204 IPR011812 Biosynthetic peptidoglycan transglycosylase YPD4_3204 IPR023346 Lysozyme-like domain superfamily YPD4_3204 IPR036950 Penicillin binding protein transglycosylase domain YPD4_3205 IPR014004 Transport-associated and nodulation domain, bacteria YPD4_3205 IPR007055 BON domain YPD4_3206 IPR035461 GmhA/DiaA YPD4_3206 IPR001347 Sugar isomerase (SIS) YPD4_3206 IPR023070 DnaA initiator-associating protein YPD4_3207 IPR011335 Restriction endonuclease type II-like YPD4_3207 IPR003509 Uncharacterised protein family UPF0102 YPD4_3207 IPR011856 tRNA endonuclease-like domain superfamily YPD4_3208 IPR007443 Penicillin-binding protein activator LpoA YPD4_3208 IPR028082 Periplasmic binding protein-like I YPD4_3208 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_3209 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YPD4_3209 IPR000878 Tetrapyrrole methylase YPD4_3209 IPR035996 Tetrapyrrole methylase superfamily YPD4_3209 IPR014777 Tetrapyrrole methylase, subdomain 1 YPD4_3209 IPR014776 Tetrapyrrole methylase, subdomain 2 YPD4_3209 IPR008189 rRNA small subunit methyltransferase I YPD4_3210 IPR014710 RmlC-like jelly roll fold YPD4_3210 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPD4_3210 IPR003829 Pirin, N-terminal domain YPD4_3210 IPR012093 Pirin YPD4_3210 IPR011051 RmlC-like cupin domain superfamily YPD4_3211 IPR000847 Transcription regulator HTH, LysR YPD4_3211 IPR005119 LysR, substrate-binding YPD4_3211 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3211 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3212 IPR036249 Thioredoxin-like superfamily YPD4_3212 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPD4_3212 IPR016639 Glutathione S-transferase Omega/GSH YPD4_3212 IPR004045 Glutathione S-transferase, N-terminal YPD4_3212 IPR040079 Glutathione Transferase family YPD4_3212 IPR010987 Glutathione S-transferase, C-terminal-like YPD4_3213 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3213 IPR002611 IstB-like ATP-binding protein YPD4_3213 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_3213 IPR001270 ClpA/B family YPD4_3213 IPR003593 AAA+ ATPase domain YPD4_3214 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_3214 IPR002611 IstB-like ATP-binding protein YPD4_3214 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3214 IPR001270 ClpA/B family YPD4_3214 IPR003593 AAA+ ATPase domain YPD4_3215 IPR001584 Integrase, catalytic core YPD4_3215 IPR036397 Ribonuclease H superfamily YPD4_3215 IPR017894 HTH domain, IS21 transposase-type YPD4_3215 IPR012337 Ribonuclease H-like superfamily YPD4_3215 IPR006120 Resolvase, HTH domain YPD4_3216 IPR029058 Alpha/Beta hydrolase fold YPD4_3216 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPD4_3217 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPD4_3217 IPR035980 Ribosomal protein S6 superfamily YPD4_3217 IPR020815 Ribosomal protein S6, conserved site YPD4_3217 IPR020814 Ribosomal protein S6, plastid/chloroplast YPD4_3217 IPR000529 Ribosomal protein S6 YPD4_3218 IPR036935 Ribosomal protein L9, N-terminal domain superfamily YPD4_3218 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YPD4_3218 IPR000244 Ribosomal protein L9 YPD4_3218 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPD4_3218 IPR020070 Ribosomal protein L9, N-terminal YPD4_3218 IPR020069 Ribosomal protein L9, C-terminal YPD4_3218 IPR020594 Ribosomal protein L9, bacteria/chloroplast YPD4_3219 IPR036515 Transposase IS200-like superfamily YPD4_3219 IPR002686 Transposase IS200-like YPD4_3221 IPR013731 Opacity-associated protein A, N-terminal YPD4_3221 IPR007340 Opacity-associated protein A YPD4_3222 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPD4_3222 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPD4_3222 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPD4_3223 IPR023742 Iron-sulfur cluster repair protein YftE YPD4_3223 IPR012312 Haemerythrin-like YPD4_3223 IPR019903 Repair of iron centres family YPD4_3224 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPD4_3224 IPR041827 CpdB, N-terminal metallophosphatase domain YPD4_3224 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_3224 IPR006179 5'-Nucleotidase/apyrase YPD4_3224 IPR006146 5'-Nucleotidase, conserved site YPD4_3224 IPR036907 5'-Nucleotidase, C-terminal domain superfamily YPD4_3224 IPR029052 Metallo-dependent phosphatase-like YPD4_3224 IPR008334 5'-Nucleotidase, C-terminal YPD4_3225 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPD4_3225 IPR041827 CpdB, N-terminal metallophosphatase domain YPD4_3225 IPR029052 Metallo-dependent phosphatase-like YPD4_3225 IPR036907 5'-Nucleotidase, C-terminal domain superfamily YPD4_3225 IPR006146 5'-Nucleotidase, conserved site YPD4_3225 IPR006179 5'-Nucleotidase/apyrase YPD4_3225 IPR008334 5'-Nucleotidase, C-terminal YPD4_3225 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPD4_3226 IPR000760 Inositol monophosphatase-like YPD4_3226 IPR020550 Inositol monophosphatase, conserved site YPD4_3226 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ YPD4_3226 IPR020583 Inositol monophosphatase, metal-binding site YPD4_3227 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPD4_3228 IPR000644 CBS domain YPD4_3228 IPR002550 CNNM, transmembrane domain YPD4_3228 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_3228 IPR005170 Transporter-associated domain YPD4_3228 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_3229 IPR002569 Peptide methionine sulphoxide reductase MsrA YPD4_3229 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily YPD4_3230 IPR010827 POTRA domain, BamA/TamA-like YPD4_3230 IPR039910 Surface antigen D15-like YPD4_3230 IPR034746 POTRA domain YPD4_3230 IPR035243 TamA, POTRA domain 1 YPD4_3230 IPR000184 Bacterial surface antigen (D15) YPD4_3231 IPR007452 Translocation and assembly module TamB YPD4_3232 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YPD4_3232 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily YPD4_3232 IPR013024 Gamma-glutamyl cyclotransferase-like YPD4_3232 IPR039126 Gamma-glutamylaminecyclotransferase YPD4_3233 IPR008162 Inorganic pyrophosphatase YPD4_3233 IPR036649 Inorganic pyrophosphatase superfamily YPD4_3234 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal YPD4_3234 IPR028343 Fructose-1,6-bisphosphatase YPD4_3234 IPR020548 Fructose-1,6-bisphosphatase, active site YPD4_3234 IPR000146 Fructose-1,6-bisphosphatase class 1 YPD4_3235 IPR013221 Mur ligase, central YPD4_3235 IPR000713 Mur ligase, N-terminal catalytic domain YPD4_3235 IPR036615 Mur ligase, C-terminal domain superfamily YPD4_3235 IPR004101 Mur ligase, C-terminal YPD4_3235 IPR036565 Mur-like, catalytic domain superfamily YPD4_3235 IPR005757 Murein peptide ligase YPD4_3236 IPR020899 Arginine repressor, C-terminal YPD4_3236 IPR036251 Arginine repressor, C-terminal domain superfamily YPD4_3236 IPR020900 Arginine repressor, DNA-binding domain YPD4_3236 IPR001669 Arginine repressor YPD4_3236 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3236 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3237 IPR001236 Lactate/malate dehydrogenase, N-terminal YPD4_3237 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPD4_3237 IPR001252 Malate dehydrogenase, active site YPD4_3237 IPR022383 Lactate/malate dehydrogenase, C-terminal YPD4_3237 IPR001557 L-lactate/malate dehydrogenase YPD4_3237 IPR023958 Malate dehydrogenase, type 1, bacterial YPD4_3237 IPR010097 Malate dehydrogenase, type 1 YPD4_3237 IPR036291 NAD(P)-binding domain superfamily YPD4_3239 IPR033749 Polyprenyl synthetase, conserved site YPD4_3239 IPR000092 Polyprenyl synthetase YPD4_3239 IPR008949 Isoprenoid synthase domain superfamily YPD4_3240 IPR018258 Ribosomal protein L21, conserved site YPD4_3240 IPR036164 L21-like superfamily YPD4_3240 IPR028909 Ribosomal protein L21-like YPD4_3240 IPR001787 Ribosomal protein L21 YPD4_3241 IPR000620 EamA domain YPD4_3242 IPR014100 GTP-binding protein Obg/CgtA YPD4_3242 IPR006169 GTP1/OBG domain YPD4_3242 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPD4_3242 IPR035101 GTP-binding protein, Obg-type YPD4_3242 IPR006074 GTP1/OBG, conserved site YPD4_3242 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3242 IPR036726 GTP1/OBG domain superfamily YPD4_3242 IPR006073 GTP binding domain YPD4_3243 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_3243 IPR005467 Histidine kinase domain YPD4_3243 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3243 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_3243 IPR003660 HAMP domain YPD4_3243 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_3243 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_3244 IPR011006 CheY-like superfamily YPD4_3244 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_3244 IPR001789 Signal transduction response regulator, receiver domain YPD4_3244 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3244 IPR039420 Transcriptional regulatory protein WalR-like YPD4_3245 IPR012338 Beta-lactamase/transpeptidase-like YPD4_3245 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YPD4_3246 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPD4_3246 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPD4_3246 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPD4_3246 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPD4_3246 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPD4_3246 IPR006359 Transcription elongation factor GreA YPD4_3246 IPR023459 Transcription elongation factor GreA/GreB family YPD4_3246 IPR028624 Transcription elongation factor GreA/GreB YPD4_3247 IPR001890 RNA-binding, CRM domain YPD4_3247 IPR017924 RNA-binding protein YhbY YPD4_3247 IPR035920 YhbY-like superfamily YPD4_3248 IPR015507 Ribosomal RNA large subunit methyltransferase E YPD4_3248 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPD4_3248 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3248 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YPD4_3249 IPR011546 Peptidase M41, FtsH extracellular YPD4_3249 IPR003593 AAA+ ATPase domain YPD4_3249 IPR041569 AAA ATPase, AAA+ lid domain YPD4_3249 IPR003960 ATPase, AAA-type, conserved site YPD4_3249 IPR005936 Peptidase, FtsH YPD4_3249 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3249 IPR003959 ATPase, AAA-type, core YPD4_3249 IPR037219 Peptidase M41-like YPD4_3249 IPR000642 Peptidase M41 YPD4_3250 IPR011005 Dihydropteroate synthase-like YPD4_3250 IPR000489 Pterin-binding domain YPD4_3250 IPR006390 Dihydropteroate synthase YPD4_3251 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPD4_3251 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPD4_3251 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPD4_3251 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPD4_3251 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPD4_3251 IPR016066 Alpha-D-phosphohexomutase, conserved site YPD4_3251 IPR005841 Alpha-D-phosphohexomutase superfamily YPD4_3251 IPR006352 Phosphoglucosamine mutase, bacterial type YPD4_3251 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPD4_3252 IPR028998 Ribosome maturation factor RimP, C-terminal YPD4_3252 IPR003728 Ribosome maturation factor RimP YPD4_3252 IPR035956 RimP, N-terminal domain superfamily YPD4_3252 IPR028989 Ribosome maturation factor RimP, N-terminal YPD4_3252 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily YPD4_3253 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YPD4_3253 IPR015946 K homology domain-like, alpha/beta YPD4_3253 IPR009019 K homology domain superfamily, prokaryotic type YPD4_3253 IPR012340 Nucleic acid-binding, OB-fold YPD4_3253 IPR030842 Transcription termination/antitermination protein NusA, bacterial YPD4_3253 IPR022967 RNA-binding domain, S1 YPD4_3253 IPR013735 Transcription factor NusA, N-terminal YPD4_3253 IPR010214 Transcription termination factor NusA, C-terminal duplication YPD4_3253 IPR010213 Transcription termination factor NusA YPD4_3253 IPR025249 KH domain, NusA-like YPD4_3253 IPR003029 S1 domain YPD4_3253 IPR036555 NusA, N-terminal domain superfamily YPD4_3254 IPR004161 Translation elongation factor EFTu-like, domain 2 YPD4_3254 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YPD4_3254 IPR009061 Putative DNA-binding domain superfamily YPD4_3254 IPR013575 Initiation factor 2 associated domain, bacterial YPD4_3254 IPR006847 Translation initiation factor IF-2, N-terminal YPD4_3254 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3254 IPR023115 Translation initiation factor IF- 2, domain 3 YPD4_3254 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_3254 IPR000178 Translation initiation factor aIF-2, bacterial-like YPD4_3254 IPR000795 Transcription factor, GTP-binding domain YPD4_3254 IPR005225 Small GTP-binding protein domain YPD4_3254 IPR015760 Translation initiation factor IF- 2 YPD4_3255 IPR023799 Ribosome-binding factor A domain superfamily YPD4_3255 IPR020053 Ribosome-binding factor A, conserved site YPD4_3255 IPR015946 K homology domain-like, alpha/beta YPD4_3255 IPR000238 Ribosome-binding factor A YPD4_3256 IPR036974 PUA domain superfamily YPD4_3256 IPR002501 Pseudouridine synthase II, N-terminal YPD4_3256 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YPD4_3256 IPR032819 tRNA pseudouridylate synthase B, C-terminal YPD4_3256 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPD4_3256 IPR015947 PUA-like superfamily YPD4_3256 IPR014780 tRNA pseudouridine synthase II, TruB YPD4_3258 IPR001584 Integrase, catalytic core YPD4_3258 IPR038965 Transposase InsF-like YPD4_3258 IPR012337 Ribonuclease H-like superfamily YPD4_3258 IPR036397 Ribonuclease H superfamily YPD4_3258 IPR025948 HTH-like domain YPD4_3262 IPR036624 Hcp1-like superfamily YPD4_3262 IPR008514 Type VI secretion system effector, Hcp YPD4_3263 IPR010794 Maltose operon periplasmic YPD4_3264 IPR036998 Porin, LamB-type superfamily YPD4_3264 IPR003192 Porin, LamB-type YPD4_3264 IPR023738 Maltoporin YPD4_3265 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3265 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPD4_3265 IPR017871 ABC transporter, conserved site YPD4_3265 IPR003439 ABC transporter-like YPD4_3265 IPR003593 AAA+ ATPase domain YPD4_3265 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_3265 IPR040582 MalK, OB fold domain YPD4_3266 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPD4_3266 IPR006061 Solute-binding family 1, conserved site YPD4_3266 IPR006059 Bacterial extracellular solute-binding protein YPD4_3267 IPR035277 MalF, N-terminal YPD4_3267 IPR029345 Maltose transport system permease protein MalF, P2 domain YPD4_3267 IPR035906 MetI-like superfamily YPD4_3267 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3267 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like YPD4_3268 IPR035906 MetI-like superfamily YPD4_3268 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3269 IPR020948 Phosphate-starvation-induced PsiE-like YPD4_3269 IPR009315 Phosphate-starvation-induced PsiE YPD4_3270 IPR001672 Phosphoglucose isomerase (PGI) YPD4_3270 IPR035476 Phosphoglucose isomerase, SIS domain 1 YPD4_3270 IPR018189 Phosphoglucose isomerase, conserved site YPD4_3270 IPR023096 Phosphoglucose isomerase, C-terminal YPD4_3270 IPR035482 Phosphoglucose isomerase, SIS domain 2 YPD4_3271 IPR036393 Acetylglutamate kinase-like superfamily YPD4_3271 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain YPD4_3271 IPR002912 ACT domain YPD4_3271 IPR018042 Aspartate kinase, conserved site YPD4_3271 IPR001341 Aspartate kinase YPD4_3271 IPR005260 Aspartate kinase, monofunctional class YPD4_3271 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_3272 IPR027282 Two partner secretion pathway transporter YPD4_3272 IPR034746 POTRA domain YPD4_3272 IPR005565 Haemolysin activator HlyB, C-terminal YPD4_3272 IPR013686 Polypeptide-transport-associated, ShlB-type YPD4_3272 IPR035251 ShlB, POTRA domain YPD4_3273 IPR027282 Two partner secretion pathway transporter YPD4_3273 IPR035251 ShlB, POTRA domain YPD4_3273 IPR034746 POTRA domain YPD4_3273 IPR013686 Polypeptide-transport-associated, ShlB-type YPD4_3273 IPR005565 Haemolysin activator HlyB, C-terminal YPD4_3274 IPR011050 Pectin lyase fold/virulence factor YPD4_3274 IPR008638 Filamentous haemagglutinin, N-terminal YPD4_3274 IPR025157 Hemagglutinin repeat YPD4_3274 IPR012334 Pectin lyase fold YPD4_3275 IPR036724 Cobalamin-binding domain superfamily YPD4_3275 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YPD4_3275 IPR036594 Methionine synthase domain YPD4_3275 IPR011822 Cobalamin-dependent methionine synthase YPD4_3275 IPR033706 Methionine synthase, B12-binding domain YPD4_3275 IPR036589 Homocysteine-binding domain superfamily YPD4_3275 IPR003726 Homocysteine-binding domain YPD4_3275 IPR011005 Dihydropteroate synthase-like YPD4_3275 IPR000489 Pterin-binding domain YPD4_3275 IPR006158 Cobalamin (vitamin B12)-binding domain YPD4_3275 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily YPD4_3275 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPD4_3276 IPR005471 Transcription regulator IclR, N-terminal YPD4_3276 IPR014757 Transcription regulator IclR, C-terminal YPD4_3276 IPR029016 GAF-like domain superfamily YPD4_3276 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3276 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3277 IPR014757 Transcription regulator IclR, C-terminal YPD4_3277 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3277 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3277 IPR005471 Transcription regulator IclR, N-terminal YPD4_3277 IPR029016 GAF-like domain superfamily YPD4_3278 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPD4_3279 IPR040442 Pyruvate kinase-like domain superfamily YPD4_3279 IPR006254 Isocitrate lyase YPD4_3279 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YPD4_3279 IPR039556 ICL/PEPM domain YPD4_3279 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_3280 IPR006252 Malate synthase A YPD4_3280 IPR011076 Malate synthase-like superfamily YPD4_3280 IPR001465 Malate synthase YPD4_3280 IPR019830 Malate synthase, conserved site YPD4_3281 IPR029062 Class I glutamine amidotransferase-like YPD4_3281 IPR005697 Homoserine O-succinyltransferase MetA YPD4_3281 IPR033752 MetA family YPD4_3282 IPR024051 AICAR transformylase, duplicated domain superfamily YPD4_3282 IPR016193 Cytidine deaminase-like YPD4_3282 IPR011607 Methylglyoxal synthase-like domain YPD4_3282 IPR036914 Methylglyoxal synthase-like domain superfamily YPD4_3282 IPR002695 Bifunctional purine biosynthesis protein PurH-like YPD4_3283 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YPD4_3283 IPR016185 Pre-ATP-grasp domain superfamily YPD4_3283 IPR013815 ATP-grasp fold, subdomain 1 YPD4_3283 IPR011761 ATP-grasp fold YPD4_3283 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily YPD4_3283 IPR000115 Phosphoribosylglycinamide synthetase YPD4_3283 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YPD4_3283 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YPD4_3283 IPR011054 Rudiment single hybrid motif YPD4_3283 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPD4_3284 IPR010858 Protein of unknown function DUF1481 YPD4_3284 IPR016500 Uncharacterised conserved protein UCP006993 YPD4_3285 IPR007338 Protein of unknown function DUF416 YPD4_3285 IPR023381 YP001051499.1-like domain superfamily YPD4_3286 IPR007581 Endonuclease V YPD4_3287 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YPD4_3287 IPR038071 UROD/MetE-like superfamily YPD4_3287 IPR006361 Uroporphyrinogen decarboxylase HemE YPD4_3289 IPR022925 NADH pyrophosphatase NudC YPD4_3289 IPR015797 NUDIX hydrolase-like domain superfamily YPD4_3289 IPR020084 NUDIX hydrolase, conserved site YPD4_3289 IPR015376 Zinc ribbon, NADH pyrophosphatase YPD4_3289 IPR000086 NUDIX hydrolase domain YPD4_3290 IPR038309 Rsd/AlgQ superfamily YPD4_3290 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPD4_3290 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPD4_3291 IPR037509 Phosphomethylpyrimidine synthase YPD4_3291 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B YPD4_3291 IPR038521 ThiC/Bza superfamily YPD4_3291 IPR025747 ThiC-associated domain YPD4_3292 IPR013785 Aldolase-type TIM barrel YPD4_3292 IPR036206 Thiamin phosphate synthase superfamily YPD4_3292 IPR022998 Thiamine phosphate synthase/TenI YPD4_3292 IPR034291 Thiamine phosphate synthase YPD4_3293 IPR000594 THIF-type NAD/FAD binding fold YPD4_3293 IPR035985 Ubiquitin-activating enzyme YPD4_3293 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF YPD4_3294 IPR008867 Thiazole synthase YPD4_3294 IPR033983 Thiazole synthase ThiG YPD4_3294 IPR013785 Aldolase-type TIM barrel YPD4_3295 IPR010722 Biotin and thiamin synthesis-associated domain YPD4_3295 IPR007197 Radical SAM YPD4_3295 IPR013785 Aldolase-type TIM barrel YPD4_3295 IPR012726 Thiazole biosynthesis ThiH YPD4_3295 IPR034428 ThiH/NocL/HydG-like YPD4_3296 IPR002686 Transposase IS200-like YPD4_3296 IPR036515 Transposase IS200-like superfamily YPD4_3297 IPR038120 RNA polymerase Rpb1, funnel domain superfamily YPD4_3297 IPR006592 RNA polymerase, N-terminal YPD4_3297 IPR000722 RNA polymerase, alpha subunit YPD4_3297 IPR007081 RNA polymerase Rpb1, domain 5 YPD4_3297 IPR007083 RNA polymerase Rpb1, domain 4 YPD4_3297 IPR007080 RNA polymerase Rpb1, domain 1 YPD4_3297 IPR042102 RNA polymerase Rpb1, domain 3 superfamily YPD4_3297 IPR007066 RNA polymerase Rpb1, domain 3 YPD4_3297 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YPD4_3298 IPR015712 DNA-directed RNA polymerase, subunit 2 YPD4_3298 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain YPD4_3298 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily YPD4_3298 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type YPD4_3298 IPR007121 RNA polymerase, beta subunit, conserved site YPD4_3298 IPR007644 RNA polymerase, beta subunit, protrusion YPD4_3298 IPR007642 RNA polymerase Rpb2, domain 2 YPD4_3298 IPR037034 RNA polymerase Rpb2, domain 2 superfamily YPD4_3298 IPR007645 RNA polymerase Rpb2, domain 3 YPD4_3298 IPR007641 RNA polymerase Rpb2, domain 7 YPD4_3298 IPR014724 RNA polymerase Rpb2, OB-fold YPD4_3298 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YPD4_3299 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily YPD4_3299 IPR008932 Ribosomal protein L7/L12, oligomerisation YPD4_3299 IPR013823 Ribosomal protein L7/L12, C-terminal YPD4_3299 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPD4_3299 IPR000206 Ribosomal protein L7/L12 YPD4_3300 IPR002363 Ribosomal protein L10, eubacterial, conserved site YPD4_3300 IPR022973 Ribosomal protein L10 YPD4_3300 IPR001790 Ribosomal protein L10P YPD4_3301 IPR002143 Ribosomal protein L1 YPD4_3301 IPR005878 Ribosomal protein L1, bacterial-type YPD4_3301 IPR023673 Ribosomal protein L1, conserved site YPD4_3301 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPD4_3301 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPD4_3301 IPR023674 Ribosomal protein L1-like YPD4_3302 IPR000911 Ribosomal protein L11/L12 YPD4_3302 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YPD4_3302 IPR006519 Ribosomal protein L11, bacterial-type YPD4_3302 IPR020783 Ribosomal protein L11, C-terminal YPD4_3302 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YPD4_3302 IPR020784 Ribosomal protein L11, N-terminal YPD4_3302 IPR020785 Ribosomal protein L11, conserved site YPD4_3303 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPD4_3303 IPR005824 KOW YPD4_3303 IPR006645 NusG, N-terminal YPD4_3303 IPR036735 NusG, N-terminal domain superfamily YPD4_3303 IPR014722 Ribosomal protein L2, domain 2 YPD4_3303 IPR001062 Transcription antitermination protein, NusG YPD4_3303 IPR008991 Translation protein SH3-like domain superfamily YPD4_3304 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPD4_3304 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPD4_3304 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPD4_3304 IPR000795 Transcription factor, GTP-binding domain YPD4_3304 IPR005225 Small GTP-binding protein domain YPD4_3304 IPR031157 Tr-type G domain, conserved site YPD4_3304 IPR033720 Elongation factor Tu, domain 2 YPD4_3304 IPR004161 Translation elongation factor EFTu-like, domain 2 YPD4_3304 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPD4_3304 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_3304 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3305 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_3305 IPR002611 IstB-like ATP-binding protein YPD4_3305 IPR001270 ClpA/B family YPD4_3305 IPR003593 AAA+ ATPase domain YPD4_3305 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3306 IPR017894 HTH domain, IS21 transposase-type YPD4_3306 IPR001584 Integrase, catalytic core YPD4_3306 IPR012337 Ribonuclease H-like superfamily YPD4_3306 IPR006120 Resolvase, HTH domain YPD4_3306 IPR036397 Ribonuclease H superfamily YPD4_3307 IPR000182 GNAT domain YPD4_3307 IPR016181 Acyl-CoA N-acyltransferase YPD4_3308 IPR006083 Phosphoribulokinase/uridine kinase YPD4_3308 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3308 IPR004566 Pantothenate kinase YPD4_3309 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3309 IPR008988 Transcriptional repressor, C-terminal YPD4_3309 IPR013196 Helix-turn-helix, type 11 YPD4_3309 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3309 IPR003142 Biotin protein ligase, C-terminal YPD4_3309 IPR004409 Biotin operon repressor, helix-turn-helix domain YPD4_3309 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YPD4_3309 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPD4_3309 IPR030855 Bifunctional ligase/repressor BirA YPD4_3310 IPR036318 FAD-binding, type PCMH-like superfamily YPD4_3310 IPR016167 FAD-binding, type PCMH, subdomain 1 YPD4_3310 IPR016169 FAD-binding, type PCMH, subdomain 2 YPD4_3310 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YPD4_3310 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YPD4_3310 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily YPD4_3310 IPR006094 FAD linked oxidase, N-terminal YPD4_3310 IPR016166 FAD-binding domain, PCMH-type YPD4_3311 IPR003445 Cation transporter YPD4_3311 IPR004772 TrkH potassium transport family YPD4_3312 IPR035647 EF-G domain III/V-like YPD4_3312 IPR023582 Impact family YPD4_3312 IPR015796 Impact family, bacterial/archaeal YPD4_3312 IPR001498 Impact, N-terminal YPD4_3312 IPR036956 Impact, N-terminal domain superfamily YPD4_3312 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_3312 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPD4_3312 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPD4_3314 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPD4_3314 IPR022846 Xaa-Pro dipeptidase YPD4_3314 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPD4_3314 IPR000994 Peptidase M24 YPD4_3314 IPR036005 Creatinase/aminopeptidase-like YPD4_3315 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPD4_3315 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPD4_3315 IPR012799 Fatty oxidation complex, alpha subunit FadB YPD4_3315 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPD4_3315 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_3315 IPR029045 ClpP/crotonase-like domain superfamily YPD4_3315 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPD4_3315 IPR036291 NAD(P)-binding domain superfamily YPD4_3315 IPR001753 Enoyl-CoA hydratase/isomerase YPD4_3316 IPR012805 Acetyl-CoA C-acyltransferase FadA YPD4_3316 IPR002155 Thiolase YPD4_3316 IPR016039 Thiolase-like YPD4_3316 IPR020615 Thiolase, acyl-enzyme intermediate active site YPD4_3316 IPR020610 Thiolase, active site YPD4_3316 IPR020617 Thiolase, C-terminal YPD4_3316 IPR020616 Thiolase, N-terminal YPD4_3316 IPR020613 Thiolase, conserved site YPD4_3317 IPR017927 FAD-binding domain, ferredoxin reductase-type YPD4_3317 IPR017938 Riboflavin synthase-like beta-barrel YPD4_3317 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPD4_3317 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPD4_3317 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPD4_3318 IPR002830 UbiD decarboxylyase family YPD4_3318 IPR023677 UbiD decarboxylyase, bacteria YPD4_3319 IPR036735 NusG, N-terminal domain superfamily YPD4_3319 IPR006645 NusG, N-terminal YPD4_3319 IPR010215 Transcription antitermination protein RfaH YPD4_3320 IPR001731 Delta-aminolevulinic acid dehydratase YPD4_3320 IPR030656 Delta-aminolevulinic acid dehydratase, active site YPD4_3320 IPR013785 Aldolase-type TIM barrel YPD4_3321 IPR024918 3'-5' ssDNA/RNA exonuclease TatD YPD4_3321 IPR001130 TatD family YPD4_3321 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPD4_3321 IPR032466 Metal-dependent hydrolase YPD4_3322 IPR002611 IstB-like ATP-binding protein YPD4_3322 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3322 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_3322 IPR001270 ClpA/B family YPD4_3322 IPR003593 AAA+ ATPase domain YPD4_3323 IPR017894 HTH domain, IS21 transposase-type YPD4_3323 IPR001584 Integrase, catalytic core YPD4_3323 IPR012337 Ribonuclease H-like superfamily YPD4_3323 IPR036397 Ribonuclease H superfamily YPD4_3323 IPR006120 Resolvase, HTH domain YPD4_3324 IPR024918 3'-5' ssDNA/RNA exonuclease TatD YPD4_3324 IPR001130 TatD family YPD4_3324 IPR032466 Metal-dependent hydrolase YPD4_3324 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPD4_3325 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPD4_3325 IPR002033 Sec-independent periplasmic protein translocase TatC YPD4_3326 IPR018448 Twin-arginine translocation protein TatB YPD4_3327 IPR004147 UbiB domain YPD4_3327 IPR010232 Probable protein kinase UbiB YPD4_3327 IPR011009 Protein kinase-like domain superfamily YPD4_3328 IPR003033 SCP2 sterol-binding domain YPD4_3328 IPR036527 SCP2 sterol-binding domain superfamily YPD4_3328 IPR038989 Ubiquinone biosynthesis protein UbiJ YPD4_3329 IPR004033 UbiE/COQ5 methyltransferase YPD4_3329 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3329 IPR023576 UbiE/COQ5 methyltransferase, conserved site YPD4_3330 IPR003798 DNA recombination RmuC YPD4_3331 IPR032816 SNARE associated Golgi protein YPD4_3331 IPR032818 DedA family YPD4_3332 IPR025299 CstA, C-terminal domain YPD4_3332 IPR003706 CstA, N-terminal domain YPD4_3334 IPR000845 Nucleoside phosphorylase domain YPD4_3334 IPR035994 Nucleoside phosphorylase superfamily YPD4_3334 IPR018016 Nucleoside phosphorylase, conserved site YPD4_3334 IPR010058 Uridine phosphorylase YPD4_3335 IPR002925 Dienelactone hydrolase YPD4_3335 IPR029058 Alpha/Beta hydrolase fold YPD4_3336 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YPD4_3336 IPR038071 UROD/MetE-like superfamily YPD4_3336 IPR006276 Cobalamin-independent methionine synthase YPD4_3336 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YPD4_3337 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3337 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain YPD4_3337 IPR000847 Transcription regulator HTH, LysR YPD4_3337 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3337 IPR005119 LysR, substrate-binding YPD4_3338 IPR004776 Membrane transport protein YPD4_3339 IPR030395 Glycerophosphodiester phosphodiesterase domain YPD4_3339 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPD4_3340 IPR003593 AAA+ ATPase domain YPD4_3340 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC YPD4_3340 IPR040582 MalK, OB fold domain YPD4_3340 IPR003439 ABC transporter-like YPD4_3340 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3340 IPR017871 ABC transporter, conserved site YPD4_3340 IPR008995 Molybdate/tungstate binding, C-terminal YPD4_3341 IPR035906 MetI-like superfamily YPD4_3341 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE YPD4_3341 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3342 IPR035906 MetI-like superfamily YPD4_3342 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3343 IPR006061 Solute-binding family 1, conserved site YPD4_3343 IPR006059 Bacterial extracellular solute-binding protein YPD4_3351 IPR017871 ABC transporter, conserved site YPD4_3351 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3351 IPR003439 ABC transporter-like YPD4_3351 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPD4_3351 IPR003593 AAA+ ATPase domain YPD4_3352 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3352 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPD4_3352 IPR017871 ABC transporter, conserved site YPD4_3352 IPR003439 ABC transporter-like YPD4_3352 IPR003593 AAA+ ATPase domain YPD4_3353 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPD4_3353 IPR001851 ABC transporter, permease YPD4_3354 IPR001851 ABC transporter, permease YPD4_3355 IPR028082 Periplasmic binding protein-like I YPD4_3355 IPR000709 Leu/Ile/Val-binding protein YPD4_3355 IPR028081 Leucine-binding protein domain YPD4_3356 IPR016181 Acyl-CoA N-acyltransferase YPD4_3356 IPR032900 PanD regulatory factor PanZ YPD4_3356 IPR000182 GNAT domain YPD4_3356 IPR040448 PanZ, acetyltransferase (GNAT) domain YPD4_3357 IPR002686 Transposase IS200-like YPD4_3357 IPR036515 Transposase IS200-like superfamily YPD4_3358 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YPD4_3358 IPR000943 RNA polymerase sigma-70 YPD4_3358 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3358 IPR014284 RNA polymerase sigma-70 like domain YPD4_3358 IPR013324 RNA polymerase sigma factor, region 3/4-like YPD4_3358 IPR009042 RNA polymerase sigma-70 region 1.2 YPD4_3358 IPR013325 RNA polymerase sigma factor, region 2 YPD4_3358 IPR007627 RNA polymerase sigma-70 region 2 YPD4_3358 IPR007630 RNA polymerase sigma-70 region 4 YPD4_3359 IPR040690 FtsX, extracellular domain YPD4_3359 IPR003838 ABC transporter permease protein domain YPD4_3359 IPR004513 Cell division protein FtsX YPD4_3360 IPR003439 ABC transporter-like YPD4_3360 IPR017871 ABC transporter, conserved site YPD4_3360 IPR003593 AAA+ ATPase domain YPD4_3360 IPR005286 Cell division protein FtsE, ATP-binding YPD4_3360 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3361 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3361 IPR036225 SRP/SRP receptor, N-terminal YPD4_3361 IPR003593 AAA+ ATPase domain YPD4_3361 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPD4_3361 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPD4_3361 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPD4_3361 IPR004390 Signal-recognition particle receptor FtsY YPD4_3361 IPR013822 Signal recognition particle SRP54, helical bundle YPD4_3361 IPR013822 Signal recognition particle SRP54, helical bundle YPD4_3361 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPD4_3361 IPR004390 Signal-recognition particle receptor FtsY YPD4_3361 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3361 IPR036225 SRP/SRP receptor, N-terminal YPD4_3361 IPR003593 AAA+ ATPase domain YPD4_3362 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3362 IPR004398 RNA methyltransferase, RsmD YPD4_3362 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_3365 IPR012506 YhhN-like YPD4_3366 IPR023298 P-type ATPase, transmembrane domain superfamily YPD4_3366 IPR001757 P-type ATPase YPD4_3366 IPR008250 P-type ATPase, A domain superfamily YPD4_3366 IPR023214 HAD superfamily YPD4_3366 IPR023299 P-type ATPase, cytoplasmic domain N YPD4_3366 IPR017969 Heavy-metal-associated, conserved site YPD4_3366 IPR006121 Heavy metal-associated domain, HMA YPD4_3366 IPR036163 Heavy metal-associated domain superfamily YPD4_3366 IPR027256 P-type ATPase, subfamily IB YPD4_3366 IPR018303 P-type ATPase, phosphorylation site YPD4_3366 IPR036412 HAD-like superfamily YPD4_3367 IPR001455 TusA-like domain YPD4_3367 IPR022931 Sulfur carrier protein TusA YPD4_3367 IPR036868 TusA-like domain superfamily YPD4_3368 IPR003744 Queuosine precursor transporter YPD4_3369 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPD4_3369 IPR014894 Protein DcrB YPD4_3370 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_3370 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YPD4_3370 IPR009051 Alpha-helical ferredoxin YPD4_3370 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_3370 IPR004017 Cysteine-rich domain YPD4_3371 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3371 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPD4_3371 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YPD4_3372 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPD4_3372 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3372 IPR006076 FAD dependent oxidoreductase YPD4_3372 IPR007419 BFD-like [2Fe-2S]-binding domain YPD4_3372 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YPD4_3372 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPD4_3373 IPR030395 Glycerophosphodiester phosphodiesterase domain YPD4_3373 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPD4_3375 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPD4_3375 IPR023214 HAD superfamily YPD4_3375 IPR036412 HAD-like superfamily YPD4_3375 IPR000150 Cof family YPD4_3376 IPR022742 Serine aminopeptidase, S33 YPD4_3376 IPR029058 Alpha/Beta hydrolase fold YPD4_3377 IPR001123 Amino acid exporter protein, LeuE-type YPD4_3377 IPR004778 Homoserine/Threonine efflux protein YPD4_3378 IPR004778 Homoserine/Threonine efflux protein YPD4_3378 IPR001123 Amino acid exporter protein, LeuE-type YPD4_3379 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3379 IPR018982 RQC domain YPD4_3379 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YPD4_3379 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3379 IPR002121 HRDC domain YPD4_3379 IPR001650 Helicase, C-terminal YPD4_3379 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_3379 IPR004589 DNA helicase, ATP-dependent, RecQ type YPD4_3379 IPR011545 DEAD/DEAH box helicase domain YPD4_3379 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YPD4_3379 IPR010997 HRDC-like superfamily YPD4_3380 IPR003187 Phospholipase A1 YPD4_3380 IPR036541 Phospholipase A1 superfamily YPD4_3381 IPR003736 Phenylacetic acid degradation-related domain YPD4_3381 IPR006683 Thioesterase domain YPD4_3381 IPR029069 HotDog domain superfamily YPD4_3382 IPR000620 EamA domain YPD4_3382 IPR004626 RarD protein YPD4_3383 IPR004488 Magnesium/cobalt transport protein CorA YPD4_3383 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPD4_3384 IPR013785 Aldolase-type TIM barrel YPD4_3384 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_3384 IPR009215 TIM-barrel domain, IGPS-like YPD4_3385 IPR008322 Uncharacterised protein family UPF0261 YPD4_3386 IPR008322 Uncharacterised protein family UPF0261 YPD4_3388 IPR013986 DExx box DNA helicase domain superfamily YPD4_3388 IPR005753 DNA helicase, ATP-dependent, UvrD type YPD4_3388 IPR014017 UvrD-like DNA helicase, C-terminal YPD4_3388 IPR000212 DNA helicase, UvrD/REP type YPD4_3388 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3388 IPR014016 UvrD-like helicase, ATP-binding domain YPD4_3388 IPR034739 UvrD/AddA helicase, N-terminal YPD4_3389 IPR036412 HAD-like superfamily YPD4_3389 IPR023214 HAD superfamily YPD4_3389 IPR006439 HAD hydrolase, subfamily IA YPD4_3389 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_3390 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_3390 IPR013762 Integrase-like, catalytic domain superfamily YPD4_3390 IPR010998 Integrase/recombinase, N-terminal YPD4_3390 IPR004107 Integrase, SAM-like, N-terminal YPD4_3390 IPR011931 Tyrosine recombinase XerC YPD4_3390 IPR023009 Tyrosine recombinase XerC/XerD YPD4_3390 IPR002104 Integrase, catalytic domain YPD4_3391 IPR029016 GAF-like domain superfamily YPD4_3391 IPR007435 Protein of unknown function DUF484 YPD4_3392 IPR018510 Diaminopimelate epimerase, active site YPD4_3392 IPR001653 Diaminopimelate epimerase, DapF YPD4_3393 IPR002908 Frataxin/CyaY YPD4_3393 IPR036524 Frataxin/CyaY superfamily YPD4_3393 IPR020895 Frataxin conserved site YPD4_3394 IPR024685 Adenylate cyclase class-I, N-terminal domain YPD4_3394 IPR024686 Adenylate cyclase class-I, conserved site YPD4_3394 IPR000274 Adenylate cyclase, class-I YPD4_3395 IPR000860 Porphobilinogen deaminase YPD4_3395 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YPD4_3395 IPR022417 Porphobilinogen deaminase, N-terminal YPD4_3395 IPR022418 Porphobilinogen deaminase, C-terminal YPD4_3395 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily YPD4_3396 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YPD4_3396 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily YPD4_3396 IPR039793 Uroporphyrinogen-III synthase YPD4_3397 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YPD4_3398 IPR019734 Tetratricopeptide repeat YPD4_3398 IPR013105 Tetratricopeptide repeat 2 YPD4_3398 IPR005254 Heme biosynthesis-associated TPR protein YPD4_3398 IPR010817 HemY, N-terminal YPD4_3398 IPR013026 Tetratricopeptide repeat-containing domain YPD4_3398 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_3400 IPR004841 Amino acid permease/ SLC12A domain YPD4_3400 IPR004840 Amino acid permease, conserved site YPD4_3401 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YPD4_3401 IPR004629 Glycosyl transferase WecB/TagA/CpsF YPD4_3402 IPR010691 Probable ECA polymerase WzyE YPD4_3403 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase YPD4_3404 IPR032896 Lipid III flippase WzxE YPD4_3404 IPR002797 Polysaccharide biosynthesis protein YPD4_3405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_3405 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE YPD4_3405 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_3405 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPD4_3405 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like YPD4_3405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPD4_3406 IPR012752 dTDP-fucosamine acetyltransferase WecD YPD4_3406 IPR016181 Acyl-CoA N-acyltransferase YPD4_3406 IPR002110 Ankyrin repeat YPD4_3406 IPR020683 Ankyrin repeat-containing domain YPD4_3406 IPR000182 GNAT domain YPD4_3407 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_3407 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YPD4_3407 IPR005835 Nucleotidyl transferase domain YPD4_3408 IPR016040 NAD(P)-binding domain YPD4_3408 IPR005888 dTDP-glucose 4,6-dehydratase YPD4_3408 IPR036291 NAD(P)-binding domain superfamily YPD4_3409 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC YPD4_3409 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YPD4_3409 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPD4_3409 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPD4_3409 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPD4_3409 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPD4_3409 IPR036291 NAD(P)-binding domain superfamily YPD4_3409 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_3409 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPD4_3410 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain YPD4_3410 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB YPD4_3410 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like YPD4_3411 IPR003856 Polysaccharide chain length determinant N-terminal domain YPD4_3411 IPR032895 ECA polysaccharide chain length modulation protein WzzE YPD4_3412 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YPD4_3412 IPR000715 Glycosyl transferase, family 4 YPD4_3413 IPR003593 AAA+ ATPase domain YPD4_3413 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_3413 IPR011129 Cold shock domain YPD4_3413 IPR011112 Rho termination factor, N-terminal YPD4_3413 IPR036269 Rho termination factor, N-terminal domain superfamily YPD4_3413 IPR011113 Rho termination factor, RNA-binding domain YPD4_3413 IPR012340 Nucleic acid-binding, OB-fold YPD4_3413 IPR004665 Transcription termination factor Rho YPD4_3413 IPR041703 Transcription termination factor Rho, ATP binding domain YPD4_3413 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3414 IPR013766 Thioredoxin domain YPD4_3414 IPR017937 Thioredoxin, conserved site YPD4_3414 IPR005746 Thioredoxin YPD4_3414 IPR036249 Thioredoxin-like superfamily YPD4_3415 IPR023554 ATP-dependent RNA helicase RhlB type YPD4_3415 IPR014014 RNA helicase, DEAD-box type, Q motif YPD4_3415 IPR011545 DEAD/DEAH box helicase domain YPD4_3415 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPD4_3415 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3415 IPR001650 Helicase, C-terminal YPD4_3415 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_3416 IPR030673 Pyrophosphatase, GppA/Ppx-type YPD4_3416 IPR003695 Ppx/GppA phosphatase YPD4_3416 IPR022371 Exopolyphosphatase YPD4_3416 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase YPD4_3417 IPR000212 DNA helicase, UvrD/REP type YPD4_3417 IPR005752 ATP-dependent DNA helicase Rep YPD4_3417 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3417 IPR034739 UvrD/AddA helicase, N-terminal YPD4_3417 IPR014016 UvrD-like helicase, ATP-binding domain YPD4_3417 IPR013986 DExx box DNA helicase domain superfamily YPD4_3417 IPR014017 UvrD-like DNA helicase, C-terminal YPD4_3419 IPR001207 Transposase, mutator type YPD4_3421 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_3421 IPR008962 PapD-like superfamily YPD4_3421 IPR016147 Pili assembly chaperone, N-terminal YPD4_3421 IPR016148 Pili assembly chaperone, C-terminal YPD4_3421 IPR001829 Pili assembly chaperone, bacterial YPD4_3421 IPR018046 Pili assembly chaperone, conserved site YPD4_3421 IPR013783 Immunoglobulin-like fold YPD4_3422 IPR037224 PapC, N-terminal domain superfamily YPD4_3422 IPR025949 PapC-like, C-terminal domain YPD4_3422 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_3422 IPR018030 Fimbrial membrane usher, conserved site YPD4_3422 IPR000015 Outer membrane usher protein YPD4_3422 IPR025885 PapC, N-terminal domain YPD4_3424 IPR008962 PapD-like superfamily YPD4_3424 IPR016148 Pili assembly chaperone, C-terminal YPD4_3424 IPR001829 Pili assembly chaperone, bacterial YPD4_3424 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_3424 IPR016147 Pili assembly chaperone, N-terminal YPD4_3424 IPR013783 Immunoglobulin-like fold YPD4_3424 IPR018046 Pili assembly chaperone, conserved site YPD4_3426 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_3426 IPR013023 Ketol-acid reductoisomerase YPD4_3426 IPR013116 Ketol-acid reductoisomerase, N-terminal YPD4_3426 IPR000506 Ketol-acid reductoisomerase, C-terminal YPD4_3426 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_3426 IPR036291 NAD(P)-binding domain superfamily YPD4_3427 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain YPD4_3427 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3427 IPR000847 Transcription regulator HTH, LysR YPD4_3427 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3427 IPR005119 LysR, substrate-binding YPD4_3432 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_3432 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_3432 IPR005787 Threonine dehydratase, biosynthetic YPD4_3432 IPR038110 Threonine dehydratase, ACT-like domain superfamily YPD4_3432 IPR001721 Threonine dehydratase, ACT-like domain YPD4_3432 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPD4_3433 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPD4_3433 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPD4_3433 IPR004404 Dihydroxy-acid dehydratase YPD4_3433 IPR037237 IlvD/EDD, N-terminal domain YPD4_3433 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPD4_3434 IPR001544 Aminotransferase class IV YPD4_3434 IPR018300 Aminotransferase, class IV, conserved site YPD4_3434 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPD4_3434 IPR005785 Branched-chain amino acid aminotransferase I YPD4_3434 IPR033939 Branched-chain aminotransferase YPD4_3435 IPR029061 Thiamin diphosphate-binding fold YPD4_3435 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPD4_3435 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPD4_3435 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPD4_3435 IPR012000 Thiamine pyrophosphate enzyme, central domain YPD4_3435 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPD4_3435 IPR000399 TPP-binding enzyme, conserved site YPD4_3435 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPD4_3436 IPR003593 AAA+ ATPase domain YPD4_3436 IPR004482 Mg chelatase-related protein YPD4_3436 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPD4_3436 IPR000523 Magnesium chelatase ChlI domain YPD4_3436 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_3436 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3436 IPR025158 Mg chelatase-related protein, C-terminal domain YPD4_3437 IPR007335 Protein of unknown function DUF413 YPD4_3438 IPR005119 LysR, substrate-binding YPD4_3438 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3438 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3438 IPR020890 Transcription regulator HTH, HdfR YPD4_3438 IPR000847 Transcription regulator HTH, LysR YPD4_3439 IPR001851 ABC transporter, permease YPD4_3440 IPR001851 ABC transporter, permease YPD4_3441 IPR003439 ABC transporter-like YPD4_3441 IPR003593 AAA+ ATPase domain YPD4_3441 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3441 IPR017871 ABC transporter, conserved site YPD4_3442 IPR025997 Periplasmic binding protein YPD4_3442 IPR028082 Periplasmic binding protein-like I YPD4_3442 IPR033893 ABC transporter periplasmic-binding protein YtfQ YPD4_3443 IPR004391 Glutamate racemase YPD4_3443 IPR015942 Asp/Glu/hydantoin racemase YPD4_3443 IPR033134 Asp/Glu racemase, active site 2 YPD4_3443 IPR018187 Asp/Glu racemase, active site 1 YPD4_3443 IPR001920 Asp/Glu racemase YPD4_3444 IPR010101 TonB-dependent vitamin B12 transporter BtuB YPD4_3444 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_3444 IPR012910 TonB-dependent receptor, plug domain YPD4_3444 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_3444 IPR010917 TonB-dependent receptor, conserved site YPD4_3444 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_3444 IPR039426 Vitamin B12 transporter BtuB-like YPD4_3445 IPR030390 RNA methyltransferase TrmA, active site YPD4_3445 IPR030391 RNA methyltransferase TrmA, conserved site YPD4_3445 IPR010280 (Uracil-5)-methyltransferase family YPD4_3445 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YPD4_3445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3446 IPR009867 Protein of unknown function DUF1422 YPD4_3447 IPR023764 Transcriptional repressor HTH, FabR YPD4_3447 IPR001647 DNA-binding HTH domain, TetR-type YPD4_3447 IPR009057 Homeobox-like domain superfamily YPD4_3448 IPR022962 Soluble pyridine nucleotide transhydrogenase YPD4_3448 IPR023753 FAD/NAD(P)-binding domain YPD4_3448 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPD4_3448 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPD4_3448 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3448 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPD4_3449 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3449 IPR005119 LysR, substrate-binding YPD4_3449 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3449 IPR000847 Transcription regulator HTH, LysR YPD4_3450 IPR011906 Glutaredoxin domain YPD4_3450 IPR036249 Thioredoxin-like superfamily YPD4_3450 IPR013740 Redoxin YPD4_3450 IPR037944 Peroxiredoxin-5-like YPD4_3450 IPR011767 Glutaredoxin active site YPD4_3450 IPR002109 Glutaredoxin YPD4_3450 IPR014025 Glutaredoxin subgroup YPD4_3451 IPR023753 FAD/NAD(P)-binding domain YPD4_3451 IPR006258 Dihydrolipoamide dehydrogenase YPD4_3451 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPD4_3451 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPD4_3451 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPD4_3451 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3451 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPD4_3452 IPR006260 TonB/TolA, C-terminal YPD4_3452 IPR037682 TonB, C-terminal YPD4_3453 IPR006144 Secretion protein HlyD, conserved site YPD4_3453 IPR010129 Type I secretion membrane fusion protein, HlyD family YPD4_3454 IPR010128 ATPase, type I secretion system, PrtD YPD4_3454 IPR003593 AAA+ ATPase domain YPD4_3454 IPR011527 ABC transporter type 1, transmembrane domain YPD4_3454 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3454 IPR003439 ABC transporter-like YPD4_3454 IPR017871 ABC transporter, conserved site YPD4_3454 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_3456 IPR039426 Vitamin B12 transporter BtuB-like YPD4_3456 IPR000531 TonB-dependent receptor-like, beta-barrel YPD4_3456 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPD4_3456 IPR037066 TonB-dependent receptor, plug domain superfamily YPD4_3456 IPR011276 TonB-dependent haem/haemoglobin receptor YPD4_3456 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPD4_3456 IPR012910 TonB-dependent receptor, plug domain YPD4_3457 IPR020557 Fumarate lyase, conserved site YPD4_3457 IPR008948 L-Aspartase-like YPD4_3457 IPR024083 Fumarase/histidase, N-terminal YPD4_3457 IPR022761 Fumarate lyase, N-terminal YPD4_3457 IPR000362 Fumarate lyase family YPD4_3457 IPR029419 Argininosuccinate lyase, C-terminal YPD4_3457 IPR009049 Argininosuccinate lyase YPD4_3458 IPR001048 Aspartate/glutamate/uridylate kinase YPD4_3458 IPR037528 Acetylglutamate kinase ArgB YPD4_3458 IPR004662 Acetylglutamate kinase family YPD4_3458 IPR036393 Acetylglutamate kinase-like superfamily YPD4_3458 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic YPD4_3459 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YPD4_3459 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YPD4_3459 IPR036291 NAD(P)-binding domain superfamily YPD4_3459 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPD4_3459 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPD4_3460 IPR036264 Bacterial exopeptidase dimerisation domain YPD4_3460 IPR010169 Acetylornithine deacetylase ArgE YPD4_3460 IPR011650 Peptidase M20, dimerisation domain YPD4_3460 IPR002933 Peptidase M20 YPD4_3460 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPD4_3461 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site YPD4_3461 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YPD4_3461 IPR021135 Phosphoenolpyruvate carboxylase YPD4_3461 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPD4_3461 IPR033129 Phosphoenolpyruvate carboxylase, His active site YPD4_3463 IPR038965 Transposase InsF-like YPD4_3463 IPR001584 Integrase, catalytic core YPD4_3463 IPR012337 Ribonuclease H-like superfamily YPD4_3463 IPR025948 HTH-like domain YPD4_3463 IPR036397 Ribonuclease H superfamily YPD4_3465 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPD4_3465 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3465 IPR006076 FAD dependent oxidoreductase YPD4_3465 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily YPD4_3465 IPR031656 Alpha-glycerophosphate oxidase, C-terminal YPD4_3466 IPR000811 Glycosyl transferase, family 35 YPD4_3466 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPD4_3466 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPD4_3467 IPR001296 Glycosyl transferase, family 1 YPD4_3467 IPR013534 Starch synthase, catalytic domain YPD4_3467 IPR011835 Bacterial/plant glycogen synthase YPD4_3468 IPR011004 Trimeric LpxA-like superfamily YPD4_3468 IPR005835 Nucleotidyl transferase domain YPD4_3468 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YPD4_3468 IPR005836 ADP-glucose pyrophosphorylase, conserved site YPD4_3468 IPR011831 Glucose-1-phosphate adenylyltransferase YPD4_3468 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_3469 IPR014756 Immunoglobulin E-set YPD4_3469 IPR013783 Immunoglobulin-like fold YPD4_3469 IPR017853 Glycoside hydrolase superfamily YPD4_3469 IPR004193 Glycoside hydrolase, family 13, N-terminal YPD4_3469 IPR011837 Glycogen debranching enzyme, GlgX type YPD4_3469 IPR040784 Glycogen debranching enzyme, C-terminal domain YPD4_3469 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPD4_3469 IPR013780 Glycosyl hydrolase, all-beta YPD4_3469 IPR022844 Glycogen debranching enzyme, bacterial YPD4_3470 IPR017853 Glycoside hydrolase superfamily YPD4_3470 IPR013780 Glycosyl hydrolase, all-beta YPD4_3470 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta YPD4_3470 IPR004193 Glycoside hydrolase, family 13, N-terminal YPD4_3470 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPD4_3470 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YPD4_3470 IPR014756 Immunoglobulin E-set YPD4_3470 IPR013783 Immunoglobulin-like fold YPD4_3470 IPR037439 1,4-alpha-glucan-branching enzyme YPD4_3471 IPR003018 GAF domain YPD4_3471 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3471 IPR010559 Signal transduction histidine kinase, internal region YPD4_3471 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YPD4_3472 IPR008964 Invasin/intimin cell-adhesion fragments YPD4_3472 IPR024519 Inverse autotransporter, beta-domain YPD4_3472 IPR038177 Inverse autotransporter, beta-domain superfamily YPD4_3472 IPR013783 Immunoglobulin-like fold YPD4_3472 IPR016187 C-type lectin fold YPD4_3472 IPR016186 C-type lectin-like/link domain superfamily YPD4_3472 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPD4_3472 IPR015217 Invasin, domain 3 YPD4_3472 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPD4_3472 IPR013117 Intimin, C-terminal YPD4_3473 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPD4_3473 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPD4_3473 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YPD4_3473 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YPD4_3473 IPR012080 Aspartate-semialdehyde dehydrogenase YPD4_3473 IPR036291 NAD(P)-binding domain superfamily YPD4_3474 IPR002771 Multiple antibiotic resistance (MarC)-related YPD4_3476 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPD4_3476 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3476 IPR031322 Shikimate kinase/gluconokinase YPD4_3477 IPR003474 Gluconate transporter YPD4_3478 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPD4_3478 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPD4_3478 IPR000843 LacI-type HTH domain YPD4_3478 IPR028082 Periplasmic binding protein-like I YPD4_3479 IPR003829 Pirin, N-terminal domain YPD4_3479 IPR012093 Pirin YPD4_3479 IPR014710 RmlC-like jelly roll fold YPD4_3479 IPR011051 RmlC-like cupin domain superfamily YPD4_3479 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPD4_3480 IPR011006 CheY-like superfamily YPD4_3480 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3480 IPR001867 OmpR/PhoB-type DNA-binding domain YPD4_3480 IPR039420 Transcriptional regulatory protein WalR-like YPD4_3480 IPR001789 Signal transduction response regulator, receiver domain YPD4_3480 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_3482 IPR013785 Aldolase-type TIM barrel YPD4_3482 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 YPD4_3482 IPR000771 Fructose-bisphosphate aldolase, class-II YPD4_3484 IPR028082 Periplasmic binding protein-like I YPD4_3484 IPR025997 Periplasmic binding protein YPD4_3485 IPR001851 ABC transporter, permease YPD4_3486 IPR003593 AAA+ ATPase domain YPD4_3486 IPR003439 ABC transporter-like YPD4_3486 IPR017871 ABC transporter, conserved site YPD4_3486 IPR015861 ABC transporter, ribose import, RbsA YPD4_3486 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3487 IPR011006 CheY-like superfamily YPD4_3487 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_3487 IPR001789 Signal transduction response regulator, receiver domain YPD4_3487 IPR005467 Histidine kinase domain YPD4_3487 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3487 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPD4_3487 IPR000014 PAS domain YPD4_3487 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPD4_3487 IPR035965 PAS domain superfamily YPD4_3487 IPR013656 PAS fold-4 YPD4_3487 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPD4_3488 IPR023166 HI0933-like insert domain superfamily YPD4_3488 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like YPD4_3488 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3489 IPR001204 Phosphate transporter YPD4_3491 IPR019598 Universal stress protein B YPD4_3492 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPD4_3492 IPR006015 Universal stress protein A family YPD4_3492 IPR006016 UspA YPD4_3493 IPR033922 NAD(P) binding domain of glutamate dehydrogenase YPD4_3493 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YPD4_3493 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YPD4_3493 IPR033524 Leu/Phe/Val dehydrogenases active site YPD4_3493 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YPD4_3493 IPR036291 NAD(P)-binding domain superfamily YPD4_3493 IPR014362 Glutamate dehydrogenase YPD4_3494 IPR024079 Metallopeptidase, catalytic domain superfamily YPD4_3494 IPR013858 Peptidase M10 serralysin, C-terminal YPD4_3494 IPR006026 Peptidase, metallopeptidase YPD4_3494 IPR034033 Serralysin-like metallopeptidase domain YPD4_3494 IPR001818 Peptidase M10, metallopeptidase YPD4_3494 IPR018511 Hemolysin-type calcium-binding conserved site YPD4_3494 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_3494 IPR001343 RTX calcium-binding nonapeptide repeat YPD4_3494 IPR016294 Peptidase M10B YPD4_3495 IPR007536 Ribosomal RNA small subunit methyltransferase J YPD4_3495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3496 IPR001567 Peptidase M3A/M3B catalytic domain YPD4_3496 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPD4_3497 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_3497 IPR007473 Ribosomal RNA large subunit methyltransferase J YPD4_3497 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3498 IPR006322 Glutathione reductase, eukaryote/bacterial YPD4_3498 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3498 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPD4_3498 IPR023753 FAD/NAD(P)-binding domain YPD4_3498 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPD4_3498 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPD4_3498 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPD4_3499 IPR041522 CdaR, GGDEF-like domain YPD4_3499 IPR042070 PucR C-terminal helix-turn-helix domain superfamily YPD4_3499 IPR008599 Putative sugar diacid recognition YPD4_3499 IPR025736 PucR C-terminal helix-turn-helix domain YPD4_3500 IPR003474 Gluconate transporter YPD4_3501 IPR036129 Glycerate kinase superfamily YPD4_3501 IPR018197 Glycerate kinase, restriction-enzyme-like fold YPD4_3501 IPR004381 Glycerate kinase YPD4_3501 IPR018193 Glycerate kinase, flavodoxin-like fold YPD4_3506 IPR017039 Virulence factor BrkB YPD4_3506 IPR005274 Inner membrane protein YhjD YPD4_3507 IPR036265 HIT-like superfamily YPD4_3507 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily YPD4_3507 IPR003763 CDP-diacylglycerol pyrophosphatase YPD4_3508 IPR007844 AsmA YPD4_3509 IPR001633 EAL domain YPD4_3509 IPR035919 EAL domain superfamily YPD4_3510 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPD4_3510 IPR011611 Carbohydrate kinase PfkB YPD4_3510 IPR029056 Ribokinase-like YPD4_3511 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPD4_3511 IPR011765 Peptidase M16, N-terminal YPD4_3511 IPR007863 Peptidase M16, C-terminal YPD4_3512 IPR023954 C4-dicarboxylate transport protein YPD4_3512 IPR001991 Sodium:dicarboxylate symporter YPD4_3512 IPR018107 Sodium:dicarboxylate symporter, conserved site YPD4_3512 IPR036458 Sodium:dicarboxylate symporter superfamily YPD4_3514 IPR010702 Periplasmic pectate lyase YPD4_3515 IPR009331 Oligogalacturonate-specific porin YPD4_3516 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YPD4_3516 IPR035919 EAL domain superfamily YPD4_3516 IPR003660 HAMP domain YPD4_3516 IPR000160 GGDEF domain YPD4_3516 IPR001633 EAL domain YPD4_3516 IPR029787 Nucleotide cyclase YPD4_3517 IPR008928 Six-hairpin glycosidase superfamily YPD4_3517 IPR019834 Glycoside hydrolase, family 8, conserved site YPD4_3517 IPR002037 Glycoside hydrolase, family 8 YPD4_3517 IPR012341 Six-hairpin glycosidase-like superfamily YPD4_3518 IPR003593 AAA+ ATPase domain YPD4_3518 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_3518 IPR003439 ABC transporter-like YPD4_3518 IPR017871 ABC transporter, conserved site YPD4_3518 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3519 IPR003593 AAA+ ATPase domain YPD4_3519 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3519 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPD4_3519 IPR017871 ABC transporter, conserved site YPD4_3519 IPR003439 ABC transporter-like YPD4_3520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3520 IPR035906 MetI-like superfamily YPD4_3520 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPD4_3521 IPR035906 MetI-like superfamily YPD4_3521 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3522 IPR000914 Solute-binding protein family 5 domain YPD4_3522 IPR023765 Solute-binding protein family 5, conserved site YPD4_3522 IPR039424 Solute-binding protein family 5 YPD4_3522 IPR030678 Peptide/nickel binding protein, MppA-type YPD4_3523 IPR005565 Haemolysin activator HlyB, C-terminal YPD4_3523 IPR013686 Polypeptide-transport-associated, ShlB-type YPD4_3523 IPR034746 POTRA domain YPD4_3523 IPR035251 ShlB, POTRA domain YPD4_3523 IPR027282 Two partner secretion pathway transporter YPD4_3525 IPR000849 Sugar phosphate transporter YPD4_3525 IPR011701 Major facilitator superfamily YPD4_3525 IPR021159 Glycerate/sugar phosphate transporter, conserved site YPD4_3525 IPR036259 MFS transporter superfamily YPD4_3525 IPR020846 Major facilitator superfamily domain YPD4_3526 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPD4_3526 IPR007895 MASE1 YPD4_3526 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_3526 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3526 IPR005467 Histidine kinase domain YPD4_3527 IPR002611 IstB-like ATP-binding protein YPD4_3527 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_3527 IPR001270 ClpA/B family YPD4_3527 IPR003593 AAA+ ATPase domain YPD4_3527 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3528 IPR017894 HTH domain, IS21 transposase-type YPD4_3528 IPR001584 Integrase, catalytic core YPD4_3528 IPR006120 Resolvase, HTH domain YPD4_3528 IPR012337 Ribonuclease H-like superfamily YPD4_3528 IPR036397 Ribonuclease H superfamily YPD4_3529 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3529 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPD4_3529 IPR005467 Histidine kinase domain YPD4_3529 IPR007895 MASE1 YPD4_3529 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_3530 IPR011006 CheY-like superfamily YPD4_3530 IPR000792 Transcription regulator LuxR, C-terminal YPD4_3530 IPR001789 Signal transduction response regulator, receiver domain YPD4_3530 IPR016032 Signal transduction response regulator, C-terminal effector YPD4_3531 IPR000917 Sulfatase, N-terminal YPD4_3531 IPR040423 Phosphoethanolamine transferase YPD4_3531 IPR012549 Phosphoethanolamine transferase, N-terminal YPD4_3531 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPD4_3532 IPR012354 Esterase/lipase YPD4_3532 IPR022742 Serine aminopeptidase, S33 YPD4_3532 IPR029058 Alpha/Beta hydrolase fold YPD4_3533 IPR004840 Amino acid permease, conserved site YPD4_3533 IPR004841 Amino acid permease/ SLC12A domain YPD4_3534 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YPD4_3534 IPR008948 L-Aspartase-like YPD4_3534 IPR005921 Histidine ammonia-lyase YPD4_3534 IPR024083 Fumarase/histidase, N-terminal YPD4_3534 IPR001106 Aromatic amino acid lyase YPD4_3535 IPR035400 Urocanase, N-terminal domain YPD4_3535 IPR023637 Urocanase YPD4_3535 IPR035401 Urocanase, C-terminal domain YPD4_3535 IPR038364 Urocanase, central domain superfamily YPD4_3535 IPR023636 Urocanase conserved site YPD4_3535 IPR035085 Urocanase, Rossmann-like domain YPD4_3535 IPR036190 Urocanase superfamily YPD4_3536 IPR005856 Cysteine synthase YPD4_3536 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPD4_3536 IPR005858 Cysteine synthase CysM YPD4_3536 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_3536 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_3537 IPR029057 Phosphoribosyltransferase-like YPD4_3537 IPR000836 Phosphoribosyltransferase domain YPD4_3537 IPR005764 Adenine phosphoribosyl transferase YPD4_3539 IPR011761 ATP-grasp fold YPD4_3540 IPR033870 FatB domain YPD4_3540 IPR002491 ABC transporter periplasmic binding domain YPD4_3541 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_3541 IPR037294 ABC transporter, BtuC-like YPD4_3542 IPR000522 ABC transporter, permease protein, BtuC-like YPD4_3542 IPR037294 ABC transporter, BtuC-like YPD4_3543 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3543 IPR003593 AAA+ ATPase domain YPD4_3543 IPR017871 ABC transporter, conserved site YPD4_3543 IPR003439 ABC transporter-like YPD4_3547 IPR002104 Integrase, catalytic domain YPD4_3547 IPR010998 Integrase/recombinase, N-terminal YPD4_3547 IPR013762 Integrase-like, catalytic domain superfamily YPD4_3547 IPR004107 Integrase, SAM-like, N-terminal YPD4_3547 IPR025166 Integrase, DNA-binding domain YPD4_3547 IPR038488 Integrase, DNA-binding domain superfamily YPD4_3547 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPD4_3548 IPR009057 Homeobox-like domain superfamily YPD4_3548 IPR018060 DNA binding HTH domain, AraC-type YPD4_3548 IPR018062 HTH domain AraC-type, conserved site YPD4_3548 IPR020449 Transcription regulator HTH, AraC- type YPD4_3548 IPR028082 Periplasmic binding protein-like I YPD4_3549 IPR001851 ABC transporter, permease YPD4_3550 IPR017871 ABC transporter, conserved site YPD4_3550 IPR013455 ABC transporter, D-xylose, ATP-binding protein YPD4_3550 IPR003593 AAA+ ATPase domain YPD4_3550 IPR003439 ABC transporter-like YPD4_3550 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3551 IPR025997 Periplasmic binding protein YPD4_3551 IPR028082 Periplasmic binding protein-like I YPD4_3551 IPR013456 D-xylose ABC transporter, substrate-binding protein YPD4_3552 IPR036237 Xylose isomerase-like superfamily YPD4_3552 IPR013452 Xylose isomerase, bacterial-type YPD4_3552 IPR001998 Xylose isomerase YPD4_3553 IPR018483 Carbohydrate kinase, FGGY, conserved site YPD4_3553 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPD4_3553 IPR000577 Carbohydrate kinase, FGGY YPD4_3553 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPD4_3553 IPR006000 Xylulokinase YPD4_3555 IPR016147 Pili assembly chaperone, N-terminal YPD4_3555 IPR018046 Pili assembly chaperone, conserved site YPD4_3555 IPR016148 Pili assembly chaperone, C-terminal YPD4_3555 IPR008962 PapD-like superfamily YPD4_3555 IPR001829 Pili assembly chaperone, bacterial YPD4_3555 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_3555 IPR013783 Immunoglobulin-like fold YPD4_3556 IPR000015 Outer membrane usher protein YPD4_3556 IPR037224 PapC, N-terminal domain superfamily YPD4_3556 IPR025885 PapC, N-terminal domain YPD4_3556 IPR025949 PapC-like, C-terminal domain YPD4_3556 IPR018030 Fimbrial membrane usher, conserved site YPD4_3556 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_3557 IPR025885 PapC, N-terminal domain YPD4_3557 IPR025949 PapC-like, C-terminal domain YPD4_3557 IPR018030 Fimbrial membrane usher, conserved site YPD4_3557 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_3557 IPR037224 PapC, N-terminal domain superfamily YPD4_3557 IPR000015 Outer membrane usher protein YPD4_3558 IPR036937 Fimbrial-type adhesion domain superfamily YPD4_3558 IPR000259 Fimbrial-type adhesion domain YPD4_3558 IPR008966 Adhesion domain superfamily YPD4_3559 IPR032905 O-acetyltransferase WecH YPD4_3559 IPR002656 Acyltransferase 3 YPD4_3561 IPR038965 Transposase InsF-like YPD4_3561 IPR025948 HTH-like domain YPD4_3561 IPR001584 Integrase, catalytic core YPD4_3561 IPR012337 Ribonuclease H-like superfamily YPD4_3561 IPR036397 Ribonuclease H superfamily YPD4_3562 IPR036259 MFS transporter superfamily YPD4_3562 IPR011701 Major facilitator superfamily YPD4_3562 IPR020846 Major facilitator superfamily domain YPD4_3565 IPR002513 Tn3 transposase DDE domain YPD4_3565 IPR025296 Domain of unknown function DUF4158 YPD4_3566 IPR036390 Winged helix DNA-binding domain superfamily YPD4_3566 IPR015190 Translation elongation factor SelB, winged helix, type 2 YPD4_3566 IPR031157 Tr-type G domain, conserved site YPD4_3566 IPR015191 Translation elongation factor SelB, winged helix, type 3 YPD4_3566 IPR004161 Translation elongation factor EFTu-like, domain 2 YPD4_3566 IPR004535 Translation elongation factor, selenocysteine-specific YPD4_3566 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPD4_3566 IPR036388 Winged helix-like DNA-binding domain superfamily YPD4_3566 IPR000795 Transcription factor, GTP-binding domain YPD4_3566 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3566 IPR009000 Translation protein, beta-barrel domain superfamily YPD4_3567 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_3567 IPR004534 L-seryl-tRNA(Sec) selenium transferase YPD4_3567 IPR018319 L-seryl-tRNA selenium transferase-like YPD4_3567 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YPD4_3567 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_3568 IPR006452 Formate dehydrogenase accessory protein YPD4_3568 IPR024064 FdhE-like superfamily YPD4_3569 IPR016174 Di-haem cytochrome, transmembrane YPD4_3569 IPR006471 Formate dehydrogenase, gamma subunit YPD4_3569 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPD4_3570 IPR015246 Formate dehydrogenase, transmembrane YPD4_3570 IPR014603 Formate dehydrogenase iron-sulphur subunit YPD4_3570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPD4_3570 IPR038384 Formate dehydrogenase, C-terminal domain superfamily YPD4_3570 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria YPD4_3570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPD4_3571 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPD4_3571 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_3571 IPR006656 Molybdopterin oxidoreductase YPD4_3571 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPD4_3571 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPD4_3571 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_3571 IPR006443 Formate dehydrogenase-N, alpha subunit YPD4_3571 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_3572 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPD4_3572 IPR006443 Formate dehydrogenase-N, alpha subunit YPD4_3572 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPD4_3572 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPD4_3572 IPR006656 Molybdopterin oxidoreductase YPD4_3572 IPR006657 Molybdopterin dinucleotide-binding domain YPD4_3572 IPR009010 Aspartate decarboxylase-like domain superfamily YPD4_3572 IPR006311 Twin-arginine translocation pathway, signal sequence YPD4_3573 IPR003786 Sulfur carrier protein FdhD YPD4_3573 IPR016193 Cytidine deaminase-like YPD4_3574 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPD4_3574 IPR001189 Manganese/iron superoxide dismutase YPD4_3574 IPR019833 Manganese/iron superoxide dismutase, binding site YPD4_3574 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPD4_3574 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPD4_3574 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPD4_3575 IPR004090 Chemotaxis methyl-accepting receptor YPD4_3575 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPD4_3575 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPD4_3575 IPR003660 HAMP domain YPD4_3575 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPD4_3575 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPD4_3578 IPR021230 Protein of unknown function DUF2810 YPD4_3579 IPR007761 Mannitol repressor MtlR-like YPD4_3579 IPR038026 MtlR-like superfamily YPD4_3580 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YPD4_3580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPD4_3580 IPR013131 Mannitol dehydrogenase, N-terminal YPD4_3580 IPR000669 Mannitol dehydrogenase YPD4_3580 IPR036291 NAD(P)-binding domain superfamily YPD4_3580 IPR013118 Mannitol dehydrogenase, C-terminal YPD4_3580 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPD4_3580 IPR023027 Mannitol dehydrogenase, conserved site YPD4_3583 IPR021413 Protein of unknown function DUF3053 YPD4_3584 IPR006194 Glycine-tRNA synthetase, heterodimeric YPD4_3584 IPR015944 Glycine-tRNA ligase, beta subunit YPD4_3584 IPR008909 DALR anticodon binding YPD4_3585 IPR002310 Glycine-tRNA ligase, alpha subunit YPD4_3585 IPR006194 Glycine-tRNA synthetase, heterodimeric YPD4_3586 IPR011257 DNA glycosylase YPD4_3586 IPR005019 Methyladenine glycosylase YPD4_3586 IPR004597 DNA-3-methyladenine glycosylase I YPD4_3588 IPR036737 OmpA-like domain superfamily YPD4_3588 IPR006664 Outer membrane protein, bacterial YPD4_3588 IPR039567 Glycine zipper domain YPD4_3588 IPR006665 OmpA-like domain YPD4_3588 IPR006690 Outer membrane protein, OmpA-like, conserved site YPD4_3590 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPD4_3590 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPD4_3590 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPD4_3590 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPD4_3590 IPR036291 NAD(P)-binding domain superfamily YPD4_3590 IPR023756 Glyoxylate/hydroxypyruvate reductase B YPD4_3591 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPD4_3591 IPR014635 Alpha-amylase, MalS type YPD4_3591 IPR017853 Glycoside hydrolase superfamily YPD4_3593 IPR015424 Pyridoxal phosphate-dependent transferase YPD4_3593 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPD4_3593 IPR004839 Aminotransferase, class I/classII YPD4_3594 IPR006512 YidE/YbjL duplication YPD4_3594 IPR023018 Transport protein YidE, putative YPD4_3594 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPD4_3594 IPR006037 Regulator of K+ conductance, C-terminal YPD4_3595 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPD4_3595 IPR008978 HSP20-like chaperone YPD4_3595 IPR022848 Small heat shock protein IbpB YPD4_3595 IPR002068 Alpha crystallin/Hsp20 domain YPD4_3596 IPR002068 Alpha crystallin/Hsp20 domain YPD4_3596 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPD4_3596 IPR008978 HSP20-like chaperone YPD4_3596 IPR023728 Small heat shock protein IbpA YPD4_3597 IPR010780 Protein of unknown function DUF1375 YPD4_3598 IPR022223 Protein of unknown function DUF3748 YPD4_3598 IPR011659 WD40-like Beta Propeller YPD4_3598 IPR011042 Six-bladed beta-propeller, TolB-like YPD4_3599 IPR022223 Protein of unknown function DUF3748 YPD4_3599 IPR011659 WD40-like Beta Propeller YPD4_3599 IPR011042 Six-bladed beta-propeller, TolB-like YPD4_3600 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPD4_3600 IPR002912 ACT domain YPD4_3600 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPD4_3600 IPR005789 Threonine dehydratase, catabolic YPD4_3600 IPR001926 Pyridoxal-phosphate dependent enzyme YPD4_3601 IPR014334 Ectoine utilization protein EutC YPD4_3601 IPR036291 NAD(P)-binding domain superfamily YPD4_3601 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPD4_3601 IPR023401 Ornithine cyclodeaminase, N-terminal YPD4_3603 IPR025948 HTH-like domain YPD4_3603 IPR036397 Ribonuclease H superfamily YPD4_3603 IPR012337 Ribonuclease H-like superfamily YPD4_3603 IPR038965 Transposase InsF-like YPD4_3603 IPR001584 Integrase, catalytic core YPD4_3604 IPR023214 HAD superfamily YPD4_3604 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPD4_3604 IPR000150 Cof family YPD4_3604 IPR036412 HAD-like superfamily YPD4_3605 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPD4_3605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPD4_3605 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPD4_3605 IPR034160 DNA gyrase subunit B, TOPRIM domain YPD4_3605 IPR006171 TOPRIM domain YPD4_3605 IPR001241 DNA topoisomerase, type IIA YPD4_3605 IPR002288 DNA gyrase B subunit, C-terminal YPD4_3605 IPR020568 Ribosomal protein S5 domain 2-type fold YPD4_3605 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPD4_3605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPD4_3605 IPR011557 DNA gyrase, subunit B YPD4_3605 IPR041423 DNA gyrase subunit B insert domain YPD4_3605 IPR003594 Histidine kinase/HSP90-like ATPase YPD4_3605 IPR018522 DNA topoisomerase, type IIA, conserved site YPD4_3606 IPR001238 DNA-binding, RecF YPD4_3606 IPR042174 DNA-binding RecF, domain 2 YPD4_3606 IPR018078 DNA-binding, RecF, conserved site YPD4_3606 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3606 IPR003395 RecF/RecN/SMC, N-terminal YPD4_3607 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal YPD4_3607 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal YPD4_3607 IPR001001 DNA polymerase III, beta sliding clamp YPD4_3607 IPR022637 DNA polymerase III, beta sliding clamp, central YPD4_3608 IPR038454 DnaA, N-terminal domain superfamily YPD4_3608 IPR003593 AAA+ ATPase domain YPD4_3608 IPR020591 Chromosomal replication control, initiator DnaA-like YPD4_3608 IPR024633 DnaA N-terminal domain YPD4_3608 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3608 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPD4_3608 IPR013317 Chromosomal replication initiator protein DnaA YPD4_3608 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPD4_3608 IPR001957 Chromosomal replication control, initiator DnaA YPD4_3608 IPR010921 Trp repressor/replication initiator YPD4_3609 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3609 IPR038454 DnaA, N-terminal domain superfamily YPD4_3609 IPR024633 DnaA N-terminal domain YPD4_3609 IPR013317 Chromosomal replication initiator protein DnaA YPD4_3609 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPD4_3609 IPR020591 Chromosomal replication control, initiator DnaA-like YPD4_3609 IPR001957 Chromosomal replication control, initiator DnaA YPD4_3609 IPR003593 AAA+ ATPase domain YPD4_3609 IPR010921 Trp repressor/replication initiator YPD4_3609 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPD4_3610 IPR038210 Membrane insertase YidC, periplasmic domain YPD4_3610 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 YPD4_3610 IPR038221 YidC, periplasmic domain superfamily YPD4_3610 IPR028053 Membrane insertase YidC, N-terminal YPD4_3610 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPD4_3610 IPR019998 Membrane insertase YidC YPD4_3611 IPR018948 GTP-binding protein TrmE, N-terminal YPD4_3611 IPR006073 GTP binding domain YPD4_3611 IPR004520 tRNA modification GTPase MnmE YPD4_3611 IPR027368 tRNA modification GTPase MnmE domain 2 YPD4_3611 IPR025867 MnmE, helical domain YPD4_3611 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3611 IPR031168 TrmE-type guanine nucleotide-binding domain YPD4_3611 IPR005225 Small GTP-binding protein domain YPD4_3611 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPD4_3612 IPR010758 Trans-2-enoyl-CoA reductase YPD4_3612 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YPD4_3612 IPR024906 Enoyl reductase FAD binding domain YPD4_3614 IPR006043 Xanthine/uracil/vitamin C permease YPD4_3614 IPR026033 Azaguanine-like transporters YPD4_3615 IPR036412 HAD-like superfamily YPD4_3615 IPR006439 HAD hydrolase, subfamily IA YPD4_3615 IPR041492 Haloacid dehalogenase-like hydrolase YPD4_3615 IPR023214 HAD superfamily YPD4_3615 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPD4_3616 IPR035906 MetI-like superfamily YPD4_3616 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3616 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_3617 IPR035906 MetI-like superfamily YPD4_3617 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPD4_3617 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3618 IPR018313 Solute-binding protein family 3, conserved site YPD4_3618 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPD4_3618 IPR001320 Ionotropic glutamate receptor YPD4_3618 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPD4_3620 IPR026022 PhoU domain YPD4_3620 IPR028366 Phosphate transport system protein PhoU YPD4_3620 IPR038078 PhoU-like domain superfamily YPD4_3621 IPR003593 AAA+ ATPase domain YPD4_3621 IPR005670 Phosphate transport system permease protein 1 YPD4_3621 IPR003439 ABC transporter-like YPD4_3621 IPR015850 ABC transporter, phosphate import, PstB YPD4_3621 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3621 IPR017871 ABC transporter, conserved site YPD4_3622 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3622 IPR035906 MetI-like superfamily YPD4_3622 IPR005672 Phosphate transport system permease protein PstA YPD4_3623 IPR011864 Phosphate ABC transporter, permease protein PstC YPD4_3623 IPR035906 MetI-like superfamily YPD4_3623 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPD4_3624 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS YPD4_3624 IPR024370 PBP domain YPD4_3625 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YPD4_3625 IPR029055 Nucleophile aminohydrolases, N-terminal YPD4_3625 IPR001347 Sugar isomerase (SIS) YPD4_3625 IPR017932 Glutamine amidotransferase type 2 domain YPD4_3625 IPR035466 GlmS/AgaS, SIS domain 1 YPD4_3625 IPR035490 GlmS/FrlB, SIS domain 2 YPD4_3626 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YPD4_3626 IPR011004 Trimeric LpxA-like superfamily YPD4_3626 IPR029044 Nucleotide-diphospho-sugar transferases YPD4_3626 IPR025877 MobA-like NTP transferase YPD4_3626 IPR018357 Hexapeptide transferase, conserved site YPD4_3626 IPR001451 Hexapeptide repeat YPD4_3626 IPR038009 GlmU, C-terminal LbH domain YPD4_3627 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal YPD4_3627 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit YPD4_3627 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPD4_3627 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal YPD4_3627 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily YPD4_3628 IPR003593 AAA+ ATPase domain YPD4_3628 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPD4_3628 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal YPD4_3628 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_3628 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPD4_3628 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3628 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPD4_3628 IPR005722 ATP synthase, F1 complex, beta subunit YPD4_3629 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site YPD4_3629 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily YPD4_3629 IPR000131 ATP synthase, F1 complex, gamma subunit YPD4_3630 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily YPD4_3630 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPD4_3630 IPR005294 ATP synthase, F1 complex, alpha subunit YPD4_3630 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPD4_3630 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_3630 IPR000793 ATP synthase, alpha subunit, C-terminal YPD4_3630 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPD4_3630 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPD4_3630 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_3630 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain YPD4_3631 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily YPD4_3631 IPR020781 ATPase, OSCP/delta subunit, conserved site YPD4_3631 IPR000711 ATPase, OSCP/delta subunit YPD4_3632 IPR005864 ATP synthase, F0 complex, subunit b, bacterial YPD4_3632 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast YPD4_3632 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily YPD4_3633 IPR035908 ATP synthase, F0 complex, subunit A superfamily YPD4_3633 IPR000568 ATP synthase, F0 complex, subunit A YPD4_3633 IPR023011 ATP synthase, F0 complex, subunit A, active site YPD4_3634 IPR005598 ATP synthase protein I YPD4_3635 IPR003682 rRNA small subunit methyltransferase G YPD4_3635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_3636 IPR020595 MnmG-related, conserved site YPD4_3636 IPR036188 FAD/NAD(P)-binding domain superfamily YPD4_3636 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related YPD4_3636 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG YPD4_3636 IPR026904 GidA associated domain 3 YPD4_pCD0001 IPR036397 Ribonuclease H superfamily YPD4_pCD0001 IPR012337 Ribonuclease H-like superfamily YPD4_pCD0001 IPR025948 HTH-like domain YPD4_pCD0001 IPR001584 Integrase, catalytic core YPD4_pCD0002 IPR010261 Tir chaperone protein (CesT) family YPD4_pCD0002 IPR005416 Type III secretion chaperone SycE YPD4_pCD0003 IPR015110 YopE, N-terminal domain YPD4_pCD0003 IPR014773 Virulence factor YopE, GAP domain YPD4_pCD0003 IPR003537 Yersinia virulence determinant YopE YPD4_pCD0003 IPR037168 Virulence factor YopE, GAP domain superfamily YPD4_pCD0005 IPR003115 ParB/Sulfiredoxin YPD4_pCD0005 IPR036086 ParB/Sulfiredoxin superfamily YPD4_pCD0005 IPR004437 ParB/RepB/Spo0J partition protein YPD4_pCD0005 IPR040873 SopB, HTH domain YPD4_pCD0006 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pCD0006 IPR025669 AAA domain YPD4_pCD0007 IPR025948 HTH-like domain YPD4_pCD0007 IPR012337 Ribonuclease H-like superfamily YPD4_pCD0007 IPR036397 Ribonuclease H superfamily YPD4_pCD0007 IPR001584 Integrase, catalytic core YPD4_pCD0009 IPR008874 Enterobacterial TraT complement resistance YPD4_pCD0010 IPR016505 Type III secretion system YopQ YPD4_pCD0011 IPR006473 Peptidase C58, YopT-type domain YPD4_pCD0011 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen YPD4_pCD0011 IPR038765 Papain-like cysteine peptidase superfamily YPD4_pCD0012 IPR010261 Tir chaperone protein (CesT) family YPD4_pCD0015 IPR032675 Leucine-rich repeat domain superfamily YPD4_pCD0015 IPR001611 Leucine-rich repeat YPD4_pCD0015 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPD4_pCD0016 IPR032874 DDE domain YPD4_pCD0017 IPR008898 YopD-like YPD4_pCD0018 IPR006972 Secretion system effector C, SseC-like YPD4_pCD0019 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_pCD0019 IPR013026 Tetratricopeptide repeat-containing domain YPD4_pCD0019 IPR011716 Tetratricopeptide TPR-3 YPD4_pCD0019 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup YPD4_pCD0019 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD YPD4_pCD0020 IPR036139 Virulence-associated V antigen superfamily YPD4_pCD0020 IPR005413 Low calcium response V antigen YPD4_pCD0021 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 YPD4_pCD0021 IPR013405 Type III secretion system regulator, LcrR YPD4_pCD0022 IPR006302 Type III secretion protein HrcV YPD4_pCD0022 IPR025505 FHIPEP conserved site YPD4_pCD0022 IPR042194 FHIPEP, domain 1 YPD4_pCD0022 IPR001712 Type III secretion system FHIPEP YPD4_pCD0022 IPR042193 FHIPEP, domain 3 YPD4_pCD0022 IPR042196 FHIPEP, domain 4 YPD4_pCD0023 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_pCD0023 IPR016684 Type III secretion system chaperone, YscY YPD4_pCD0024 IPR012672 Type III secretion system YscX YPD4_pCD0025 IPR012673 Type III secretion system chaperone SycN YPD4_pCD0026 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC YPD4_pCD0026 IPR010812 Hypersensitivity response secretion-like, HrpJ YPD4_pCD0027 IPR003593 AAA+ ATPase domain YPD4_pCD0027 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPD4_pCD0027 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pCD0027 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPD4_pCD0027 IPR005714 ATPase, type III secretion system, FliI/YscN YPD4_pCD0027 IPR013380 ATPase, type III secretion system, H+-transporting YPD4_pCD0027 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPD4_pCD0027 IPR040627 T3SS EscN ATPase, C-terminal YPD4_pCD0028 IPR009929 Type III secretion sytem,YscO YPD4_pCD0029 IPR021136 Flagellar hook-length control protein-like, C-terminal YPD4_pCD0029 IPR013354 Type III secretion system needle length determinant, C-terminal domain YPD4_pCD0030 IPR036429 SpoA-like superfamily YPD4_pCD0030 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPD4_pCD0030 IPR003283 Type III secretion system outer membrane, SpaO YPD4_pCD0030 IPR001543 Surface presentation of antigen (SpoA) YPD4_pCD0031 IPR005773 Yop virulence translocation protein R YPD4_pCD0031 IPR005838 Type III secretion system inner membrane P protein YPD4_pCD0032 IPR006304 Type III secretion protein SpaR/YscT YPD4_pCD0032 IPR002010 Type III secretion system inner membrane R protein YPD4_pCD0033 IPR006135 Type III secretion system substrate exporter YPD4_pCD0033 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPD4_pCD0033 IPR029025 Type III secretion system substrate exporter, C-terminal YPD4_pCD0035 IPR020449 Transcription regulator HTH, AraC- type YPD4_pCD0035 IPR037923 Transcription regulator HTH-like YPD4_pCD0035 IPR018060 DNA binding HTH domain, AraC-type YPD4_pCD0035 IPR018062 HTH domain AraC-type, conserved site YPD4_pCD0035 IPR009057 Homeobox-like domain superfamily YPD4_pCD0035 IPR003313 AraC-type arabinose-binding/dimerisation domain YPD4_pCD0036 IPR010261 Tir chaperone protein (CesT) family YPD4_pCD0036 IPR013353 Type III secretion system chaperone YscB YPD4_pCD0040 IPR032034 Yop protein translocation protein D, periplasmic domain YPD4_pCD0040 IPR032030 YscD, cytoplasmic domain YPD4_pCD0040 IPR012843 Type III secretion system YscD/HrpQ YPD4_pCD0040 IPR008984 SMAD/FHA domain superfamily YPD4_pCD0040 IPR000253 Forkhead-associated (FHA) domain YPD4_pCD0041 IPR011990 Tetratricopeptide-like helical domain superfamily YPD4_pCD0041 IPR013348 Type III secretion system YscG YPD4_pCD0042 IPR041814 Type III secretion system virulence factor YopR, core domain YPD4_pCD0042 IPR013349 Type III secretion system effector YopR YPD4_pCD0043 IPR012670 Type III secretion system, YscI/HrpB YPD4_pCD0044 IPR006182 Secretory protein YscJ/FliF YPD4_pCD0044 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPD4_pCD0045 IPR009510 Type III secretion system, secretion protein K YPD4_pCD0046 IPR012842 Type III secretion system HrpE/YscL YPD4_pCD0046 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPD4_pCD0047 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily YPD4_pCD0047 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal YPD4_pCD0049 IPR016130 Protein-tyrosine phosphatase, active site YPD4_pCD0049 IPR000242 PTP type protein phosphatase YPD4_pCD0049 IPR036484 Protein-tyrosine phosphatase, YopH, N-terminal domain superfamily YPD4_pCD0049 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH YPD4_pCD0049 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal YPD4_pCD0049 IPR029021 Protein-tyrosine phosphatase-like YPD4_pCD0049 IPR000387 Tyrosine specific protein phosphatases domain YPD4_pCD0049 IPR003595 Protein-tyrosine phosphatase, catalytic YPD4_pCD0050 IPR001584 Integrase, catalytic core YPD4_pCD0050 IPR025948 HTH-like domain YPD4_pCD0050 IPR012337 Ribonuclease H-like superfamily YPD4_pCD0050 IPR036397 Ribonuclease H superfamily YPD4_pCD0052 IPR008271 Serine/threonine-protein kinase, active site YPD4_pCD0052 IPR000719 Protein kinase domain YPD4_pCD0052 IPR011009 Protein kinase-like domain superfamily YPD4_pCD0052 IPR019093 Rac1-binding domain YPD4_pCD0052 IPR003547 Serine/threonine protein kinase, yersinia-type YPD4_pCD0054 IPR017837 Plasmid replication initiator, RepA, IncFII type YPD4_pCD0054 IPR003446 Plasmid replication initiation, RepA YPD4_pCD0057 IPR009767 DNA helicase, TraI type YPD4_pCD0057 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pCD0057 IPR040987 TraI, N-terminal subdomain YPD4_pCD0057 IPR014059 Conjugative relaxase, N-terminal YPD4_pCD0057 IPR014862 TrwC relaxase YPD4_pCD0057 IPR040668 TraI, 2B/2B-like domain YPD4_pCD0057 IPR014129 Conjugative transfer relaxase protein TraI YPD4_pCD0058 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPD4_pCD0058 IPR008126 Outer membrane adhesion, Yersinia YPD4_pCD0058 IPR011049 Serralysin-like metalloprotease, C-terminal YPD4_pCD0058 IPR005594 YadA-like, C-terminal YPD4_pCD0058 IPR008640 Head domain of trimeric autotransporter adhesin YPD4_pCD0060 IPR002513 Tn3 transposase DDE domain YPD4_pCD0060 IPR025296 Domain of unknown function DUF4158 YPD4_pCD0061 IPR009057 Homeobox-like domain superfamily YPD4_pCD0061 IPR006118 Recombinase, conserved site YPD4_pCD0061 IPR006119 Resolvase, N-terminal catalytic domain YPD4_pCD0061 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily YPD4_pCD0061 IPR006120 Resolvase, HTH domain YPD4_pCD0064 IPR025948 HTH-like domain YPD4_pCD0064 IPR036397 Ribonuclease H superfamily YPD4_pCD0064 IPR012337 Ribonuclease H-like superfamily YPD4_pCD0064 IPR001584 Integrase, catalytic core YPD4_pCD0066 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pCD0066 IPR001270 ClpA/B family YPD4_pCD0066 IPR002611 IstB-like ATP-binding protein YPD4_pCD0066 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_pCD0066 IPR003593 AAA+ ATPase domain YPD4_pMT0001 IPR001584 Integrase, catalytic core YPD4_pMT0001 IPR036397 Ribonuclease H superfamily YPD4_pMT0001 IPR012337 Ribonuclease H-like superfamily YPD4_pMT0001 IPR017894 HTH domain, IS21 transposase-type YPD4_pMT0001 IPR006120 Resolvase, HTH domain YPD4_pMT0002 IPR003593 AAA+ ATPase domain YPD4_pMT0002 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_pMT0002 IPR001270 ClpA/B family YPD4_pMT0002 IPR002611 IstB-like ATP-binding protein YPD4_pMT0002 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pMT0003 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPD4_pMT0004 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 YPD4_pMT0004 IPR008969 Carboxypeptidase-like, regulatory domain superfamily YPD4_pMT0004 IPR037053 Phage tail collar domain superfamily YPD4_pMT0004 IPR037053 Phage tail collar domain superfamily YPD4_pMT0004 IPR008969 Carboxypeptidase-like, regulatory domain superfamily YPD4_pMT0004 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal YPD4_pMT0004 IPR011083 Phage tail collar domain YPD4_pMT0004 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 YPD4_pMT0004 IPR011083 Phage tail collar domain YPD4_pMT0004 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal YPD4_pMT0011 IPR013491 Caudovirus, tape measure, N-terminal YPD4_pMT0026 IPR003439 ABC transporter-like YPD4_pMT0026 IPR010132 ATPase, type I secretion system, HlyB YPD4_pMT0026 IPR017871 ABC transporter, conserved site YPD4_pMT0026 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pMT0026 IPR005074 Peptidase C39, bacteriocin processing YPD4_pMT0026 IPR003593 AAA+ ATPase domain YPD4_pMT0026 IPR039395 Peptidase C39-like A YPD4_pMT0026 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPD4_pMT0026 IPR011527 ABC transporter type 1, transmembrane domain YPD4_pMT0026 IPR039421 Type I protein exporter YPD4_pMT0027 IPR041468 ParB/Spo0J, HTH domain YPD4_pMT0027 IPR004437 ParB/RepB/Spo0J partition protein YPD4_pMT0027 IPR003115 ParB/Sulfiredoxin YPD4_pMT0027 IPR036086 ParB/Sulfiredoxin superfamily YPD4_pMT0028 IPR036086 ParB/Sulfiredoxin superfamily YPD4_pMT0028 IPR003115 ParB/Sulfiredoxin YPD4_pMT0028 IPR041468 ParB/Spo0J, HTH domain YPD4_pMT0028 IPR004437 ParB/RepB/Spo0J partition protein YPD4_pMT0029 IPR004609 ATP-dependent DNA helicase RecG YPD4_pMT0029 IPR012340 Nucleic acid-binding, OB-fold YPD4_pMT0029 IPR011545 DEAD/DEAH box helicase domain YPD4_pMT0029 IPR033454 RecG, wedge domain YPD4_pMT0029 IPR001650 Helicase, C-terminal YPD4_pMT0029 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pMT0029 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPD4_pMT0041 IPR000525 Initiator Rep protein YPD4_pMT0046 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface YPD4_pMT0046 IPR023400 DNA recombination and repair protein RecA, C-terminal YPD4_pMT0046 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPD4_pMT0046 IPR013765 DNA recombination and repair protein RecA YPD4_pMT0046 IPR020584 DNA recombination/repair protein RecA, conserved site YPD4_pMT0046 IPR003593 AAA+ ATPase domain YPD4_pMT0046 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pMT0047 IPR038969 Flap endonuclease YPD4_pMT0047 IPR029060 PIN-like domain superfamily YPD4_pMT0047 IPR008918 Helix-hairpin-helix motif, class 2 YPD4_pMT0047 IPR002421 5'-3' exonuclease, N-terminal YPD4_pMT0047 IPR020045 DNA polymerase I-like, H3TH domain YPD4_pMT0047 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPD4_pMT0047 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPD4_pMT0052 IPR040982 DNA polymerase III alpha subunit finger domain YPD4_pMT0052 IPR029460 DNA polymerase, helix-hairpin-helix motif YPD4_pMT0052 IPR004013 PHP domain YPD4_pMT0052 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPD4_pMT0052 IPR004805 DNA polymerase III, alpha subunit YPD4_pMT0052 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain YPD4_pMT0052 IPR036895 Uracil-DNA glycosylase-like domain superfamily YPD4_pMT0054 IPR036465 von Willebrand factor A-like domain superfamily YPD4_pMT0054 IPR002035 von Willebrand factor, type A YPD4_pMT0054 IPR025861 Cobalamin biosynthesis protein CobT VWA domain YPD4_pMT0054 IPR006538 Cobalt chelatase, CobT subunit YPD4_pMT0057 IPR038699 F1 capsule antigen superfamily YPD4_pMT0057 IPR015335 F1 capsule antigen YPD4_pMT0057 IPR008966 Adhesion domain superfamily YPD4_pMT0058 IPR037224 PapC, N-terminal domain superfamily YPD4_pMT0058 IPR025885 PapC, N-terminal domain YPD4_pMT0058 IPR000015 Outer membrane usher protein YPD4_pMT0058 IPR018030 Fimbrial membrane usher, conserved site YPD4_pMT0058 IPR025949 PapC-like, C-terminal domain YPD4_pMT0058 IPR042186 Outer membrane usher protein FimD, plug domain YPD4_pMT0059 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPD4_pMT0059 IPR018046 Pili assembly chaperone, conserved site YPD4_pMT0059 IPR013783 Immunoglobulin-like fold YPD4_pMT0059 IPR016148 Pili assembly chaperone, C-terminal YPD4_pMT0059 IPR016147 Pili assembly chaperone, N-terminal YPD4_pMT0059 IPR008962 PapD-like superfamily YPD4_pMT0059 IPR001829 Pili assembly chaperone, bacterial YPD4_pMT0060 IPR018062 HTH domain AraC-type, conserved site YPD4_pMT0060 IPR020449 Transcription regulator HTH, AraC- type YPD4_pMT0060 IPR018060 DNA binding HTH domain, AraC-type YPD4_pMT0060 IPR009057 Homeobox-like domain superfamily YPD4_pMT0060 IPR029442 GyrI-like small molecule binding domain YPD4_pMT0060 IPR011256 Regulatory factor, effector binding domain superfamily YPD4_pMT0061 IPR001207 Transposase, mutator type YPD4_pMT0062 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPD4_pMT0062 IPR003346 Transposase, IS116/IS110/IS902 YPD4_pMT0063 IPR006842 Transposase (putative), YhgA-like YPD4_pMT0063 IPR010106 Recombination-promoting nuclease RpnA YPD4_pMT0064 IPR000477 Reverse transcriptase domain YPD4_pMT0066 IPR025202 Phospholipase D-like domain YPD4_pMT0066 IPR001736 Phospholipase D/Transphosphatidylase YPD4_pMT0067 IPR006842 Transposase (putative), YhgA-like YPD4_pMT0067 IPR010106 Recombination-promoting nuclease RpnA YPD4_pMT0068 IPR006120 Resolvase, HTH domain YPD4_pMT0068 IPR006119 Resolvase, N-terminal catalytic domain YPD4_pMT0068 IPR006118 Recombinase, conserved site YPD4_pMT0068 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily YPD4_pMT0069 IPR025669 AAA domain YPD4_pMT0069 IPR041250 ParA helix turn helix domain YPD4_pMT0069 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pMT0070 IPR004437 ParB/RepB/Spo0J partition protein YPD4_pMT0070 IPR014884 ParB protein family, C-terminal YPD4_pMT0070 IPR003115 ParB/Sulfiredoxin YPD4_pMT0070 IPR036086 ParB/Sulfiredoxin superfamily YPD4_pMT0072 IPR002941 DNA methylase N-4/N-6 YPD4_pMT0072 IPR001091 Restriction/modification DNA-methylase YPD4_pMT0072 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPD4_pMT0072 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPD4_pMT0073 IPR009811 Protein of unknown function DUF1380 YPD4_pMT0076 IPR004437 ParB/RepB/Spo0J partition protein YPD4_pMT0076 IPR003115 ParB/Sulfiredoxin YPD4_pMT0076 IPR036086 ParB/Sulfiredoxin superfamily YPD4_pPCP0001 IPR006120 Resolvase, HTH domain YPD4_pPCP0001 IPR012337 Ribonuclease H-like superfamily YPD4_pPCP0001 IPR036397 Ribonuclease H superfamily YPD4_pPCP0001 IPR017894 HTH domain, IS21 transposase-type YPD4_pPCP0001 IPR001584 Integrase, catalytic core YPD4_pPCP0002 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPD4_pPCP0002 IPR003593 AAA+ ATPase domain YPD4_pPCP0002 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPD4_pPCP0002 IPR001270 ClpA/B family YPD4_pPCP0002 IPR002611 IstB-like ATP-binding protein YPD4_pPCP0007 IPR000036 Peptidase A26, omptin YPD4_pPCP0007 IPR020080 Outer membrane adhesin/peptidase omptin YPD4_pPCP0007 IPR020079 Peptidase A26, omptin, conserved site YPD4_pPCP0009 IPR009241 Toxin HigB-like