YPD4_0001	SSF52218	Flavoproteins
YPD4_0002	SSF46785	"Winged helix" DNA-binding domain
YPD4_0002	SSF54909	Dimeric alpha+beta barrel
YPD4_0003	SSF55681	Class II aaRS and biotin synthetases
YPD4_0004	SSF53300	vWA-like
YPD4_0005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0007	SSF102546	RbsD-like
YPD4_0008	SSF53613	Ribokinase-like
YPD4_0009	SSF103473	MFS general substrate transporter
YPD4_0010	SSF46785	"Winged helix" DNA-binding domain
YPD4_0010	SSF48008	GntR ligand-binding domain-like
YPD4_0012	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0013	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_0014	SSF56112	Protein kinase-like (PK-like)
YPD4_0015	SSF52833	Thioredoxin-like
YPD4_0016	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YPD4_0016	SSF53098	Ribonuclease H-like
YPD4_0016	SSF56672	DNA/RNA polymerases
YPD4_0016	SSF88723	PIN domain-like
YPD4_0017	SSF143422	Transposase IS200-like
YPD4_0018	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0020	SSF102114	Radical SAM enzymes
YPD4_0021	SSF46689	Homeodomain-like
YPD4_0021	SSF52172	CheY-like
YPD4_0021	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0022	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_0022	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_0022	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0023	SSF54368	Glutamine synthetase, N-terminal domain
YPD4_0023	SSF55931	Glutamine synthetase/guanido kinase
YPD4_0024	SSF50447	Translation proteins
YPD4_0024	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0024	SSF54980	EF-G C-terminal domain-like
YPD4_0025	SSF56784	HAD-like
YPD4_0027	SSF69500	DTD-like
YPD4_0028	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0029	SSF46689	Homeodomain-like
YPD4_0029	SSF53098	Ribonuclease H-like
YPD4_0030	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_0030	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_0035	SSF50249	Nucleic acid-binding proteins
YPD4_0035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0036	SSF75217	alpha/beta knot
YPD4_0037	SSF109604	HD-domain/PDEase-like
YPD4_0037	SSF55021	ACT-like
YPD4_0037	SSF81271	TGS-like
YPD4_0037	SSF81301	Nucleotidyltransferase
YPD4_0038	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0039	SSF47781	RuvA domain 2-like
YPD4_0039	SSF50249	Nucleic acid-binding proteins
YPD4_0039	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YPD4_0042	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0042	SSF55666	Ribonuclease PH domain 2-like
YPD4_0043	SSF53271	PRTase-like
YPD4_0044	SSF46689	Homeodomain-like
YPD4_0044	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPD4_0045	SSF51283	dUTPase-like
YPD4_0046	SSF102645	CoaB-like
YPD4_0046	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YPD4_0047	SSF47781	RuvA domain 2-like
YPD4_0048	SSF46946	S13-like H2TH domain
YPD4_0048	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPD4_0048	SSF81624	N-terminal domain of MutM-like DNA repair proteins
YPD4_0049	SSF52374	Nucleotidylyl transferase
YPD4_0050	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_0051	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0052	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0053	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0054	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0055	SSF53383	PLP-dependent transferases
YPD4_0056	SSF50129	GroES-like
YPD4_0056	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0057	SSF88713	Glycoside hydrolase/deacetylase
YPD4_0058	SSF88713	Glycoside hydrolase/deacetylase
YPD4_0059	SSF51261	Duplicated hybrid motif
YPD4_0060	SSF53649	Alkaline phosphatase-like
YPD4_0060	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
YPD4_0061	SSF52821	Rhodanese/Cell cycle control phosphatase
YPD4_0062	SSF54611	SecB-like
YPD4_0063	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_0063	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0064	SSF51161	Trimeric LpxA-like enzymes
YPD4_0065	SSF75217	alpha/beta knot
YPD4_0066	SSF46689	Homeodomain-like
YPD4_0066	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YPD4_0066	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
YPD4_0066	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
YPD4_0067	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_0067	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0068	SSF52172	CheY-like
YPD4_0071	SSF160240	Cation efflux protein cytoplasmic domain-like
YPD4_0071	SSF161111	Cation efflux protein transmembrane domain-like
YPD4_0072	SSF53784	Phosphofructokinase
YPD4_0073	SSF53850	Periplasmic binding protein-like II
YPD4_0074	SSF53850	Periplasmic binding protein-like II
YPD4_0076	SSF89562	RraA-like
YPD4_0077	SSF102588	LmbE-like
YPD4_0078	SSF46785	"Winged helix" DNA-binding domain
YPD4_0078	SSF53850	Periplasmic binding protein-like II
YPD4_0079	SSF51351	Triosephosphate isomerase (TIM)
YPD4_0082	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_0082	SSF63380	Riboflavin synthase domain-like
YPD4_0083	SSF56655	Carbohydrate phosphatase
YPD4_0084	SSF53067	Actin-like ATPase domain
YPD4_0085	SSF81338	Aquaporin-like
YPD4_0086	SSF143422	Transposase IS200-like
YPD4_0087	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0087	SSF90123	ABC transporter transmembrane region
YPD4_0088	SSF51230	Single hybrid motif
YPD4_0090	SSF89562	RraA-like
YPD4_0092	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0093	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPD4_0094	SSF110997	Sporulation related repeat
YPD4_0095	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0095	SSF53822	Periplasmic binding protein-like I
YPD4_0096	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0098	SSF47598	Ribbon-helix-helix
YPD4_0099	SSF53383	PLP-dependent transferases
YPD4_0100	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0100	SSF53633	Carbamate kinase-like
YPD4_0100	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_0101	SSF51730	FAD-linked oxidoreductase
YPD4_0102	SSF53098	Ribonuclease H-like
YPD4_0103	SSF48295	TrpR-like
YPD4_0104	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_0104	SSF46785	"Winged helix" DNA-binding domain
YPD4_0105	SSF144091	Rhomboid-like
YPD4_0106	SSF52821	Rhodanese/Cell cycle control phosphatase
YPD4_0107	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0107	SSF48452	TPR-like
YPD4_0107	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0108	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0109	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0110	SSF51445	(Trans)glycosidases
YPD4_0111	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YPD4_0111	SSF89360	HesB-like domain
YPD4_0112	SSF53271	PRTase-like
YPD4_0113	SSF53474	alpha/beta-Hydrolases
YPD4_0114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0115	SSF158832	Tex N-terminal region-like
YPD4_0115	SSF47781	RuvA domain 2-like
YPD4_0115	SSF50249	Nucleic acid-binding proteins
YPD4_0115	SSF53098	Ribonuclease H-like
YPD4_0116	SSF46557	GreA transcript cleavage protein, N-terminal domain
YPD4_0116	SSF54534	FKBP-like
YPD4_0117	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0117	SSF52172	CheY-like
YPD4_0118	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_0118	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0119	SSF53795	PEP carboxykinase-like
YPD4_0119	SSF68923	PEP carboxykinase N-terminal domain
YPD4_0120	SSF118352	HSP33 redox switch-like
YPD4_0120	SSF64397	Hsp33 domain
YPD4_0121	SSF55174	Alpha-L RNA-binding motif
YPD4_0122	SSF56784	HAD-like
YPD4_0124	SSF55811	Nudix
YPD4_0125	SSF53955	Lysozyme-like
YPD4_0125	SSF56601	beta-lactamase/transpeptidase-like
YPD4_0126	SSF53067	Actin-like ATPase domain
YPD4_0132	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0133	SSF56796	Dehydroquinate synthase-like
YPD4_0134	SSF110997	Sporulation related repeat
YPD4_0135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0136	SSF51366	Ribulose-phoshate binding barrel
YPD4_0137	SSF56784	HAD-like
YPD4_0138	SSF52374	Nucleotidylyl transferase
YPD4_0139	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0139	SSF53790	Tetrapyrrole methylase
YPD4_0139	SSF75615	Siroheme synthase middle domains-like
YPD4_0141	SSF50022	ISP domain
YPD4_0142	SSF51905	FAD/NAD(P)-binding domain
YPD4_0142	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
YPD4_0142	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YPD4_0143	SSF51338	Composite domain of metallo-dependent hydrolases
YPD4_0143	SSF51556	Metallo-dependent hydrolases
YPD4_0144	SSF103473	MFS general substrate transporter
YPD4_0145	SSF56935	Porins
YPD4_0146	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0146	SSF53822	Periplasmic binding protein-like I
YPD4_0147	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0147	SSF56327	LDH C-terminal domain-like
YPD4_0148	SSF50891	Cyclophilin-like
YPD4_0149	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0150	SSF52317	Class I glutamine amidotransferase-like
YPD4_0151	SSF53383	PLP-dependent transferases
YPD4_0153	SSF46785	"Winged helix" DNA-binding domain
YPD4_0153	SSF51206	cAMP-binding domain-like
YPD4_0154	SSF82784	OsmC-like
YPD4_0156	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0157	SSF53474	alpha/beta-Hydrolases
YPD4_0159	SSF53850	Periplasmic binding protein-like II
YPD4_0160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0161	SSF161098	MetI-like
YPD4_0162	SSF51197	Clavaminate synthase-like
YPD4_0163	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0164	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_0165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0166	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0167	SSF52218	Flavoproteins
YPD4_0168	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0169	SSF54534	FKBP-like
YPD4_0170	SSF54534	FKBP-like
YPD4_0172	SSF75169	DsrEFH-like
YPD4_0173	SSF75169	DsrEFH-like
YPD4_0174	SSF50249	Nucleic acid-binding proteins
YPD4_0175	SSF47973	Ribosomal protein S7
YPD4_0176	SSF50447	Translation proteins
YPD4_0176	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0176	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0176	SSF54980	EF-G C-terminal domain-like
YPD4_0177	SSF50447	Translation proteins
YPD4_0177	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPD4_0177	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0178	SSF143422	Transposase IS200-like
YPD4_0179	SSF47240	Ferritin-like
YPD4_0180	SSF54999	Ribosomal protein S10
YPD4_0181	SSF50447	Translation proteins
YPD4_0182	SSF52166	Ribosomal protein L4
YPD4_0183	SSF54189	Ribosomal proteins S24e, L23 and L15e
YPD4_0184	SSF50104	Translation proteins SH3-like domain
YPD4_0184	SSF50249	Nucleic acid-binding proteins
YPD4_0185	SSF54843	Ribosomal protein L22
YPD4_0186	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YPD4_0186	SSF54821	Ribosomal protein S3 C-terminal domain
YPD4_0187	SSF54686	Ribosomal protein L16p/L10e
YPD4_0188	SSF50193	Ribosomal protein L14
YPD4_0189	SSF50104	Translation proteins SH3-like domain
YPD4_0190	SSF55282	RL5-like
YPD4_0191	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPD4_0192	SSF56047	Ribosomal protein S8
YPD4_0193	SSF56053	Ribosomal protein L6
YPD4_0194	SSF53137	Translational machinery components
YPD4_0195	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0195	SSF54768	dsRNA-binding domain-like
YPD4_0196	SSF52080	Ribosomal proteins L15p and L18e
YPD4_0197	SSF103491	Preprotein translocase SecY subunit
YPD4_0198	SSF46946	S13-like H2TH domain
YPD4_0199	SSF53137	Translational machinery components
YPD4_0200	SSF55174	Alpha-L RNA-binding motif
YPD4_0201	SSF47789	C-terminal domain of RNA polymerase alpha subunit
YPD4_0201	SSF55257	RBP11-like subunits of RNA polymerase
YPD4_0201	SSF56553	Insert subdomain of RNA polymerase alpha subunit
YPD4_0202	SSF64263	Prokaryotic ribosomal protein L17
YPD4_0203	SSF46955	Putative DNA-binding domain
YPD4_0204	SSF81330	Gated mechanosensitive channel
YPD4_0205	SSF116726	TrkA C-terminal domain-like
YPD4_0205	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0206	SSF48013	NusB-like
YPD4_0206	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0207	SSF50486	FMT C-terminal domain-like
YPD4_0207	SSF53328	Formyltransferase
YPD4_0208	SSF56420	Peptide deformylase
YPD4_0209	SSF102405	MCP/YpsA-like
YPD4_0211	SSF57783	Zinc beta-ribbon
YPD4_0212	SSF55821	YrdC/RibB
YPD4_0213	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0213	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPD4_0214	SSF51161	Trimeric LpxA-like enzymes
YPD4_0215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0216	SSF46689	Homeodomain-like
YPD4_0216	SSF53098	Ribonuclease H-like
YPD4_0217	SSF53474	alpha/beta-Hydrolases
YPD4_0220	SSF56801	Acetyl-CoA synthetase-like
YPD4_0221	SSF118215	Proton glutamate symport protein
YPD4_0222	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0222	SSF52172	CheY-like
YPD4_0223	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPD4_0223	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_0223	SSF52172	CheY-like
YPD4_0223	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0226	SSF46689	Homeodomain-like
YPD4_0231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0234	SSF101801	Surface presentation of antigens (SPOA)
YPD4_0238	SSF160544	EscU C-terminal domain-like
YPD4_0240	SSF46785	"Winged helix" DNA-binding domain
YPD4_0240	SSF53850	Periplasmic binding protein-like II
YPD4_0242	SSF53383	PLP-dependent transferases
YPD4_0243	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0244	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_0245	SSF53807	"Helical backbone" metal receptor
YPD4_0246	SSF144064	Heme iron utilization protein-like
YPD4_0247	SSF56935	Porins
YPD4_0248	SSF56935	Porins
YPD4_0249	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0250	SSF144064	Heme iron utilization protein-like
YPD4_0251	SSF102114	Radical SAM enzymes
YPD4_0252	SSF51730	FAD-linked oxidoreductase
YPD4_0253	SSF46785	"Winged helix" DNA-binding domain
YPD4_0254	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_0256	SSF56784	HAD-like
YPD4_0257	SSF53271	PRTase-like
YPD4_0258	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_0262	SSF158682	TerB-like
YPD4_0267	SSF141729	FimD N-terminal domain-like
YPD4_0268	SSF49354	PapD-like
YPD4_0268	SSF49584	Periplasmic chaperone C-domain
YPD4_0270	SSF49265	Fibronectin type III
YPD4_0270	SSF51055	Carbohydrate binding domain
YPD4_0270	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_0271	SSF103515	Autotransporter
YPD4_0271	SSF51126	Pectin lyase-like
YPD4_0272	SSF64288	Chorismate lyase-like
YPD4_0274	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPD4_0276	SSF46785	"Winged helix" DNA-binding domain
YPD4_0276	SSF51306	LexA/Signal peptidase
YPD4_0277	SSF46785	"Winged helix" DNA-binding domain
YPD4_0278	SSF51395	FMN-linked oxidoreductases
YPD4_0279	SSF50129	GroES-like
YPD4_0279	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0280	SSF48024	N-terminal domain of DnaB helicase
YPD4_0280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0281	SSF50621	Alanine racemase C-terminal domain-like
YPD4_0281	SSF51419	PLP-binding barrel
YPD4_0282	SSF53383	PLP-dependent transferases
YPD4_0283	SSF142906	YjbR-like
YPD4_0284	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0285	SSF50249	Nucleic acid-binding proteins
YPD4_0286	SSF54909	Dimeric alpha+beta barrel
YPD4_0287	SSF56796	Dehydroquinate synthase-like
YPD4_0288	SSF53639	AraD/HMP-PK domain-like
YPD4_0289	SSF51658	Xylose isomerase-like
YPD4_0290	SSF53067	Actin-like ATPase domain
YPD4_0291	SSF46689	Homeodomain-like
YPD4_0291	SSF51215	Regulatory protein AraC
YPD4_0292	SSF46689	Homeodomain-like
YPD4_0292	SSF51182	RmlC-like cupins
YPD4_0294	SSF50203	Bacterial enterotoxins
YPD4_0296	SSF46689	Homeodomain-like
YPD4_0296	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPD4_0297	SSF51971	Nucleotide-binding domain
YPD4_0297	SSF54862	4Fe-4S ferredoxins
YPD4_0298	SSF54862	4Fe-4S ferredoxins
YPD4_0299	SSF50692	ADC-like
YPD4_0299	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_0300	SSF52833	Thioredoxin-like
YPD4_0300	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
YPD4_0302	SSF48557	L-aspartase-like
YPD4_0304	SSF48592	GroEL equatorial domain-like
YPD4_0304	SSF52029	GroEL apical domain-like
YPD4_0304	SSF54849	GroEL-intermediate domain like
YPD4_0306	SSF102114	Radical SAM enzymes
YPD4_0307	SSF50104	Translation proteins SH3-like domain
YPD4_0307	SSF50249	Nucleic acid-binding proteins
YPD4_0308	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_0309	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YPD4_0310	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YPD4_0311	SSF46548	alpha-helical ferredoxin
YPD4_0311	SSF54292	2Fe-2S ferredoxin-like
YPD4_0312	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YPD4_0312	SSF51905	FAD/NAD(P)-binding domain
YPD4_0312	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YPD4_0313	SSF55681	Class II aaRS and biotin synthetases
YPD4_0314	SSF50182	Sm-like ribonucleoproteins
YPD4_0314	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YPD4_0314	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YPD4_0316	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0317	SSF53098	Ribonuclease H-like
YPD4_0318	SSF46548	alpha-helical ferredoxin
YPD4_0319	SSF53613	Ribokinase-like
YPD4_0319	SSF64153	YjeF N-terminal domain-like
YPD4_0320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0321	SSF53187	Zn-dependent exopeptidases
YPD4_0321	SSF54106	LysM domain
YPD4_0322	SSF118116	DNA mismatch repair protein MutL
YPD4_0322	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0322	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0324	SSF50182	Sm-like ribonucleoproteins
YPD4_0325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0325	SSF54980	EF-G C-terminal domain-like
YPD4_0326	SSF117892	Band 7/SPFH domain
YPD4_0327	SSF117892	Band 7/SPFH domain
YPD4_0328	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0329	SSF46785	"Winged helix" DNA-binding domain
YPD4_0330	SSF50249	Nucleic acid-binding proteins
YPD4_0331	SSF50249	Nucleic acid-binding proteins
YPD4_0332	SSF55315	L30e-like
YPD4_0332	SSF75217	alpha/beta knot
YPD4_0333	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YPD4_0333	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YPD4_0334	SSF159871	YdgH-like
YPD4_0335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0336	SSF46689	Homeodomain-like
YPD4_0336	SSF53098	Ribonuclease H-like
YPD4_0337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0339	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0340	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0347	SSF46689	Homeodomain-like
YPD4_0348	SSF52794	PTS system IIB component-like
YPD4_0349	SSF52794	PTS system IIB component-like
YPD4_0351	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YPD4_0351	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_0351	SSF52009	Phosphohistidine domain
YPD4_0351	SSF55594	HPr-like
YPD4_0351	SSF55804	Phoshotransferase/anion transport protein
YPD4_0353	SSF51569	Aldolase
YPD4_0354	SSF53822	Periplasmic binding protein-like I
YPD4_0357	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0358	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_0359	SSF53067	Actin-like ATPase domain
YPD4_0360	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0362	SSF111369	HlyD-like secretion proteins
YPD4_0363	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_0363	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPD4_0363	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_0364	SSF51126	Pectin lyase-like
YPD4_0365	SSF55073	Nucleotide cyclase
YPD4_0367	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0368	SSF102220	DNA polymerase III psi subunit
YPD4_0369	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_0370	SSF50447	Translation proteins
YPD4_0370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0370	SSF54980	EF-G C-terminal domain-like
YPD4_0372	SSF52151	FabD/lysophospholipase-like
YPD4_0373	SSF51556	Metallo-dependent hydrolases
YPD4_0375	SSF51569	Aldolase
YPD4_0376	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YPD4_0376	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YPD4_0377	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YPD4_0377	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
YPD4_0378	SSF143856	DeoB insert domain-like
YPD4_0378	SSF53649	Alkaline phosphatase-like
YPD4_0379	SSF53167	Purine and uridine phosphorylases
YPD4_0381	SSF56784	HAD-like
YPD4_0382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0382	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0383	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0383	SSF52374	Nucleotidylyl transferase
YPD4_0383	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0384	SSF140931	Fic-like
YPD4_0385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0386	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0387	SSF103088	OmpA-like
YPD4_0388	SSF55073	Nucleotide cyclase
YPD4_0390	SSF56784	HAD-like
YPD4_0390	SSF81653	Calcium ATPase, transduction domain A
YPD4_0390	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
YPD4_0390	SSF81665	Calcium ATPase, transmembrane domain M
YPD4_0391	SSF48435	Bacterial muramidases
YPD4_0391	SSF53955	Lysozyme-like
YPD4_0392	SSF48295	TrpR-like
YPD4_0393	SSF52972	ITPase-like
YPD4_0394	SSF53254	Phosphoglycerate mutase-like
YPD4_0395	SSF46689	Homeodomain-like
YPD4_0395	SSF55136	Probable bacterial effector-binding domain
YPD4_0397	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0397	SSF52172	CheY-like
YPD4_0398	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0398	SSF53633	Carbamate kinase-like
YPD4_0398	SSF55021	ACT-like
YPD4_0399	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0399	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_0400	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0400	SSF55060	GHMP Kinase, C-terminal domain
YPD4_0401	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_0403	SSF51569	Aldolase
YPD4_0404	SSF53218	Molybdenum cofactor biosynthesis proteins
YPD4_0405	SSF103473	MFS general substrate transporter
YPD4_0406	SSF49695	gamma-Crystallin-like
YPD4_0406	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_0408	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YPD4_0408	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YPD4_0408	SSF53067	Actin-like ATPase domain
YPD4_0409	SSF46565	Chaperone J-domain
YPD4_0409	SSF49493	HSP40/DnaJ peptide-binding domain
YPD4_0409	SSF57938	DnaJ/Hsp40 cysteine-rich domain
YPD4_0411	SSF46785	"Winged helix" DNA-binding domain
YPD4_0411	SSF53850	Periplasmic binding protein-like II
YPD4_0412	SSF52374	Nucleotidylyl transferase
YPD4_0412	SSF82114	Riboflavin kinase-like
YPD4_0413	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPD4_0413	SSF50677	ValRS/IleRS/LeuRS editing domain
YPD4_0413	SSF52374	Nucleotidylyl transferase
YPD4_0415	SSF54534	FKBP-like
YPD4_0417	SSF143422	Transposase IS200-like
YPD4_0418	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0418	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_0419	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
YPD4_0419	SSF52317	Class I glutamine amidotransferase-like
YPD4_0420	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
YPD4_0420	SSF52335	Methylglyoxal synthase-like
YPD4_0420	SSF52440	PreATP-grasp domain
YPD4_0420	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_0424	SSF53597	Dihydrofolate reductase-like
YPD4_0425	SSF143422	Transposase IS200-like
YPD4_0427	SSF56300	Metallo-dependent phosphatases
YPD4_0428	SSF110069	ApaG-like
YPD4_0429	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0430	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPD4_0431	SSF109998	Triger factor/SurA peptide-binding domain-like
YPD4_0431	SSF54534	FKBP-like
YPD4_0433	SSF46565	Chaperone J-domain
YPD4_0434	SSF55120	Pseudouridine synthase
YPD4_0439	SSF141452	Hcp1-like
YPD4_0443	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0443	SSF81923	Double Clp-N motif
YPD4_0444	SSF69255	gp5 N-terminal domain-like
YPD4_0444	SSF69279	Phage tail proteins
YPD4_0444	SSF69349	Phage fibre proteins
YPD4_0446	SSF141571	Pentapeptide repeat-like
YPD4_0447	SSF141571	Pentapeptide repeat-like
YPD4_0452	SSF103088	OmpA-like
YPD4_0453	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0456	SSF53098	Ribonuclease H-like
YPD4_0456	SSF56672	DNA/RNA polymerases
YPD4_0458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0459	SSF161098	MetI-like
YPD4_0460	SSF53850	Periplasmic binding protein-like II
YPD4_0461	SSF46785	"Winged helix" DNA-binding domain
YPD4_0461	SSF53850	Periplasmic binding protein-like II
YPD4_0462	SSF103473	MFS general substrate transporter
YPD4_0463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0464	SSF46689	Homeodomain-like
YPD4_0464	SSF53098	Ribonuclease H-like
YPD4_0465	SSF52016	LeuD/IlvD-like
YPD4_0466	SSF53732	Aconitase iron-sulfur domain
YPD4_0467	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPD4_0468	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YPD4_0468	SSF51569	Aldolase
YPD4_0469	SSF46785	"Winged helix" DNA-binding domain
YPD4_0469	SSF53850	Periplasmic binding protein-like II
YPD4_0470	SSF56801	Acetyl-CoA synthetase-like
YPD4_0471	SSF52467	DHS-like NAD/FAD-binding domain
YPD4_0471	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_0472	SSF55021	ACT-like
YPD4_0473	SSF143422	Transposase IS200-like
YPD4_0474	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0474	SSF53822	Periplasmic binding protein-like I
YPD4_0476	SSF89447	AbrB/MazE/MraZ-like
YPD4_0477	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0477	SSF81799	Putative methyltransferase TM0872, insert domain
YPD4_0479	SSF56519	Penicillin binding protein dimerisation domain
YPD4_0479	SSF56601	beta-lactamase/transpeptidase-like
YPD4_0480	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPD4_0480	SSF53623	MurD-like peptide ligases, catalytic domain
YPD4_0480	SSF63418	MurE/MurF N-terminal domain
YPD4_0481	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPD4_0481	SSF53623	MurD-like peptide ligases, catalytic domain
YPD4_0481	SSF63418	MurE/MurF N-terminal domain
YPD4_0483	SSF51984	MurCD N-terminal domain
YPD4_0483	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPD4_0483	SSF53623	MurD-like peptide ligases, catalytic domain
YPD4_0485	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0486	SSF51984	MurCD N-terminal domain
YPD4_0486	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPD4_0486	SSF53623	MurD-like peptide ligases, catalytic domain
YPD4_0487	SSF52440	PreATP-grasp domain
YPD4_0487	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_0489	SSF53067	Actin-like ATPase domain
YPD4_0490	SSF52490	Tubulin nucleotide-binding domain-like
YPD4_0490	SSF55307	Tubulin C-terminal domain-like
YPD4_0491	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0494	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0494	SSF81767	Pre-protein crosslinking domain of SecA
YPD4_0494	SSF81886	Helical scaffold and wing domains of SecA
YPD4_0495	SSF55811	Nudix
YPD4_0496	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0497	SSF46689	Homeodomain-like
YPD4_0497	SSF53098	Ribonuclease H-like
YPD4_0505	SSF46785	"Winged helix" DNA-binding domain
YPD4_0505	SSF48008	GntR ligand-binding domain-like
YPD4_0506	SSF103473	MFS general substrate transporter
YPD4_0507	SSF51556	Metallo-dependent hydrolases
YPD4_0508	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_0508	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0511	SSF143422	Transposase IS200-like
YPD4_0512	SSF118215	Proton glutamate symport protein
YPD4_0513	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0513	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_0515	SSF103515	Autotransporter
YPD4_0515	SSF51126	Pectin lyase-like
YPD4_0516	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0517	SSF51395	FMN-linked oxidoreductases
YPD4_0517	SSF51905	FAD/NAD(P)-binding domain
YPD4_0517	SSF51971	Nucleotide-binding domain
YPD4_0519	SSF56112	Protein kinase-like (PK-like)
YPD4_0520	SSF81606	PP2C-like
YPD4_0521	SSF53300	vWA-like
YPD4_0522	SSF53300	vWA-like
YPD4_0524	SSF53300	vWA-like
YPD4_0526	SSF51126	Pectin lyase-like
YPD4_0528	SSF103515	Autotransporter
YPD4_0531	SSF50331	MOP-like
YPD4_0531	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0532	SSF48208	Six-hairpin glycosidases
YPD4_0533	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0533	SSF53822	Periplasmic binding protein-like I
YPD4_0534	SSF53850	Periplasmic binding protein-like II
YPD4_0535	SSF161098	MetI-like
YPD4_0536	SSF161098	MetI-like
YPD4_0538	SSF51445	(Trans)glycosidases
YPD4_0538	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
YPD4_0539	SSF56954	Outer membrane efflux proteins (OEP)
YPD4_0541	SSF111369	HlyD-like secretion proteins
YPD4_0542	SSF53383	PLP-dependent transferases
YPD4_0544	SSF55961	Bet v1-like
YPD4_0546	SSF55298	YjgF-like
YPD4_0547	SSF55298	YjgF-like
YPD4_0548	SSF54909	Dimeric alpha+beta barrel
YPD4_0549	SSF52833	Thioredoxin-like
YPD4_0550	SSF46785	"Winged helix" DNA-binding domain
YPD4_0550	SSF53850	Periplasmic binding protein-like II
YPD4_0551	SSF54060	His-Me finger endonucleases
YPD4_0552	SSF160631	SMI1/KNR4-like
YPD4_0553	SSF160631	SMI1/KNR4-like
YPD4_0555	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPD4_0555	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPD4_0556	SSF117023	DNA primase DnaG, C-terminal domain
YPD4_0556	SSF56731	DNA primase core
YPD4_0557	SSF56731	DNA primase core
YPD4_0558	SSF53067	Actin-like ATPase domain
YPD4_0560	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPD4_0562	SSF81891	Poly A polymerase C-terminal region-like
YPD4_0563	SSF81301	Nucleotidyltransferase
YPD4_0563	SSF81891	Poly A polymerase C-terminal region-like
YPD4_0565	SSF55154	CYTH-like phosphatases
YPD4_0566	SSF81301	Nucleotidyltransferase
YPD4_0566	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
YPD4_0567	SSF52374	Nucleotidylyl transferase
YPD4_0567	SSF53613	Ribokinase-like
YPD4_0569	SSF55821	YrdC/RibB
YPD4_0570	SSF53213	LigB-like
YPD4_0571	SSF52440	PreATP-grasp domain
YPD4_0571	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_0572	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_0574	SSF56954	Outer membrane efflux proteins (OEP)
YPD4_0575	SSF55811	Nudix
YPD4_0577	SSF56300	Metallo-dependent phosphatases
YPD4_0578	SSF53474	alpha/beta-Hydrolases
YPD4_0579	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0579	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0579	SSF56719	Type II DNA topoisomerase
YPD4_0580	SSF46785	"Winged helix" DNA-binding domain
YPD4_0580	SSF53850	Periplasmic binding protein-like II
YPD4_0581	SSF52218	Flavoproteins
YPD4_0582	SSF101904	GyrA/ParC C-terminal domain-like
YPD4_0582	SSF56719	Type II DNA topoisomerase
YPD4_0583	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPD4_0584	SSF49503	Cupredoxins
YPD4_0585	SSF102114	Radical SAM enzymes
YPD4_0587	SSF51430	NAD(P)-linked oxidoreductase
YPD4_0588	SSF56796	Dehydroquinate synthase-like
YPD4_0589	SSF46689	Homeodomain-like
YPD4_0591	SSF53383	PLP-dependent transferases
YPD4_0594	SSF53300	vWA-like
YPD4_0597	SSF48452	TPR-like
YPD4_0600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0606	SSF143422	Transposase IS200-like
YPD4_0607	SSF143422	Transposase IS200-like
YPD4_0608	SSF141729	FimD N-terminal domain-like
YPD4_0609	SSF49354	PapD-like
YPD4_0609	SSF49584	Periplasmic chaperone C-domain
YPD4_0610	SSF49401	Bacterial adhesins
YPD4_0611	SSF53807	"Helical backbone" metal receptor
YPD4_0615	SSF160544	EscU C-terminal domain-like
YPD4_0618	SSF101801	Surface presentation of antigens (SPOA)
YPD4_0619	SSF101801	Surface presentation of antigens (SPOA)
YPD4_0620	SSF46689	Homeodomain-like
YPD4_0620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0623	SSF48029	FliG
YPD4_0625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0627	SSF140566	FlgN-like
YPD4_0632	SSF117143	Flagellar hook protein flgE
YPD4_0633	SSF143422	Transposase IS200-like
YPD4_0634	SSF117143	Flagellar hook protein flgE
YPD4_0635	SSF117143	Flagellar hook protein flgE
YPD4_0638	SSF64518	Phase 1 flagellin
YPD4_0639	SSF64518	Phase 1 flagellin
YPD4_0642	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0643	SSF64518	Phase 1 flagellin
YPD4_0644	SSF64518	Phase 1 flagellin
YPD4_0645	SSF64518	Phase 1 flagellin
YPD4_0647	SSF101116	Flagellar export chaperone FliS
YPD4_0649	SSF51161	Trimeric LpxA-like enzymes
YPD4_0651	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPD4_0651	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPD4_0653	SSF103088	OmpA-like
YPD4_0656	SSF46689	Homeodomain-like
YPD4_0656	SSF48295	TrpR-like
YPD4_0657	SSF53098	Ribonuclease H-like
YPD4_0658	SSF51445	(Trans)glycosidases
YPD4_0659	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0659	SSF53822	Periplasmic binding protein-like I
YPD4_0663	SSF48452	TPR-like
YPD4_0664	SSF69255	gp5 N-terminal domain-like
YPD4_0664	SSF69279	Phage tail proteins
YPD4_0664	SSF69349	Phage fibre proteins
YPD4_0665	SSF103515	Autotransporter
YPD4_0666	SSF103515	Autotransporter
YPD4_0666	SSF51126	Pectin lyase-like
YPD4_0667	SSF103515	Autotransporter
YPD4_0667	SSF51126	Pectin lyase-like
YPD4_0672	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0672	SSF90123	ABC transporter transmembrane region
YPD4_0673	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0673	SSF90123	ABC transporter transmembrane region
YPD4_0674	SSF103473	MFS general substrate transporter
YPD4_0675	SSF53474	alpha/beta-Hydrolases
YPD4_0676	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0677	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0678	SSF47336	ACP-like
YPD4_0678	SSF52777	CoA-dependent acyltransferases
YPD4_0678	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0678	SSF53474	alpha/beta-Hydrolases
YPD4_0678	SSF56801	Acetyl-CoA synthetase-like
YPD4_0679	SSF47336	ACP-like
YPD4_0679	SSF56801	Acetyl-CoA synthetase-like
YPD4_0680	SSF47336	ACP-like
YPD4_0680	SSF52777	CoA-dependent acyltransferases
YPD4_0680	SSF56801	Acetyl-CoA synthetase-like
YPD4_0681	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0682	SSF46689	Homeodomain-like
YPD4_0682	SSF53098	Ribonuclease H-like
YPD4_0683	SSF47336	ACP-like
YPD4_0683	SSF53901	Thiolase-like
YPD4_0683	SSF56801	Acetyl-CoA synthetase-like
YPD4_0684	SSF56935	Porins
YPD4_0685	SSF53187	Zn-dependent exopeptidases
YPD4_0685	SSF55031	Bacterial exopeptidase dimerisation domain
YPD4_0687	SSF52058	L domain-like
YPD4_0688	SSF52058	L domain-like
YPD4_0689	SSF52058	L domain-like
YPD4_0690	SSF103515	Autotransporter
YPD4_0690	SSF51126	Pectin lyase-like
YPD4_0693	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_0693	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPD4_0693	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_0694	SSF111369	HlyD-like secretion proteins
YPD4_0695	SSF141868	EAL domain-like
YPD4_0695	SSF55073	Nucleotide cyclase
YPD4_0695	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_0696	SSF53098	Ribonuclease H-like
YPD4_0697	SSF46689	Homeodomain-like
YPD4_0697	SSF48295	TrpR-like
YPD4_0698	SSF103473	MFS general substrate transporter
YPD4_0699	SSF56935	Porins
YPD4_0700	SSF51905	FAD/NAD(P)-binding domain
YPD4_0702	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_0705	SSF103473	MFS general substrate transporter
YPD4_0706	SSF49482	Aromatic compound dioxygenase
YPD4_0707	SSF53474	alpha/beta-Hydrolases
YPD4_0708	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0708	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
YPD4_0709	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_0717	SSF103088	OmpA-like
YPD4_0718	SSF141452	Hcp1-like
YPD4_0719	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0719	SSF81923	Double Clp-N motif
YPD4_0720	SSF69255	gp5 N-terminal domain-like
YPD4_0720	SSF69279	Phage tail proteins
YPD4_0721	SSF51261	Duplicated hybrid motif
YPD4_0721	SSF53955	Lysozyme-like
YPD4_0725	SSF52172	CheY-like
YPD4_0725	SSF53383	PLP-dependent transferases
YPD4_0725	SSF55904	Ornithine decarboxylase C-terminal domain
YPD4_0726	SSF53822	Periplasmic binding protein-like I
YPD4_0727	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0729	SSF56935	Porins
YPD4_0730	SSF53807	"Helical backbone" metal receptor
YPD4_0731	SSF53955	Lysozyme-like
YPD4_0732	SSF48150	DNA-glycosylase
YPD4_0732	SSF55811	Nudix
YPD4_0733	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0735	SSF56601	beta-lactamase/transpeptidase-like
YPD4_0737	SSF51120	beta-Roll
YPD4_0737	SSF69318	Integrin alpha N-terminal domain
YPD4_0738	SSF102114	Radical SAM enzymes
YPD4_0739	SSF52972	ITPase-like
YPD4_0740	SSF69786	YggU-like
YPD4_0742	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_0742	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0743	SSF51419	PLP-binding barrel
YPD4_0744	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0745	SSF55909	Pentein
YPD4_0746	SSF56317	Carbon-nitrogen hydrolase
YPD4_0747	SSF53098	Ribonuclease H-like
YPD4_0748	SSF143456	VC0467-like
YPD4_0749	SSF52440	PreATP-grasp domain
YPD4_0749	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_0750	SSF75217	alpha/beta knot
YPD4_0750	SSF88697	PUA domain-like
YPD4_0751	SSF54060	His-Me finger endonucleases
YPD4_0753	SSF55973	S-adenosylmethionine synthetase
YPD4_0754	SSF50621	Alanine racemase C-terminal domain-like
YPD4_0754	SSF51419	PLP-binding barrel
YPD4_0755	SSF50022	ISP domain
YPD4_0757	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_0757	SSF52922	TK C-terminal domain-like
YPD4_0758	SSF143422	Transposase IS200-like
YPD4_0759	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0759	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_0760	SSF53748	Phosphoglycerate kinase
YPD4_0761	SSF51569	Aldolase
YPD4_0762	SSF50182	Sm-like ribonucleoproteins
YPD4_0762	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YPD4_0762	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YPD4_0765	SSF46785	"Winged helix" DNA-binding domain
YPD4_0765	SSF53850	Periplasmic binding protein-like II
YPD4_0766	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_0766	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
YPD4_0767	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0767	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPD4_0767	SSF55021	ACT-like
YPD4_0768	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_0769	SSF102829	Cell division protein ZapA-like
YPD4_0770	SSF101327	YgfB-like
YPD4_0771	SSF53092	Creatinase/prolidase N-terminal domain
YPD4_0771	SSF55920	Creatinase/aminopeptidase
YPD4_0772	SSF51905	FAD/NAD(P)-binding domain
YPD4_0773	SSF51905	FAD/NAD(P)-binding domain
YPD4_0774	SSF101790	Aminomethyltransferase beta-barrel domain
YPD4_0774	SSF103025	Folate-binding domain
YPD4_0775	SSF51230	Single hybrid motif
YPD4_0776	SSF53383	PLP-dependent transferases
YPD4_0778	SSF101967	Adhesin YadA, collagen-binding domain
YPD4_0778	SSF54523	Pili subunits
YPD4_0782	SSF101790	Aminomethyltransferase beta-barrel domain
YPD4_0782	SSF103025	Folate-binding domain
YPD4_0784	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0784	SSF52172	CheY-like
YPD4_0785	SSF103190	Sensory domain-like
YPD4_0785	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_0785	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_0787	SSF52218	Flavoproteins
YPD4_0788	SSF47823	lambda integrase-like, N-terminal domain
YPD4_0788	SSF56349	DNA breaking-rejoining enzymes
YPD4_0789	SSF52833	Thioredoxin-like
YPD4_0789	SSF54423	DsbC/DsbG N-terminal domain-like
YPD4_0790	SSF64182	DHH phosphoesterases
YPD4_0791	SSF75620	Release factor
YPD4_0792	SSF50249	Nucleic acid-binding proteins
YPD4_0792	SSF55681	Class II aaRS and biotin synthetases
YPD4_0793	SSF56349	DNA breaking-rejoining enzymes
YPD4_0794	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0795	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0796	SSF46785	"Winged helix" DNA-binding domain
YPD4_0796	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0796	SSF57783	Zinc beta-ribbon
YPD4_0800	SSF140931	Fic-like
YPD4_0801	SSF69369	Cloacin translocation domain
YPD4_0807	SSF46785	"Winged helix" DNA-binding domain
YPD4_0808	SSF54001	Cysteine proteinases
YPD4_0810	SSF53822	Periplasmic binding protein-like I
YPD4_0812	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0813	SSF50331	MOP-like
YPD4_0813	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0814	SSF53850	Periplasmic binding protein-like II
YPD4_0815	SSF160964	MalF N-terminal region-like
YPD4_0815	SSF161098	MetI-like
YPD4_0816	SSF161098	MetI-like
YPD4_0817	SSF51445	(Trans)glycosidases
YPD4_0818	SSF51445	(Trans)glycosidases
YPD4_0818	SSF52317	Class I glutamine amidotransferase-like
YPD4_0819	SSF55604	Glucose permease domain IIB
YPD4_0820	SSF56935	Porins
YPD4_0821	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0821	SSF53822	Periplasmic binding protein-like I
YPD4_0822	SSF51011	Glycosyl hydrolase domain
YPD4_0822	SSF51445	(Trans)glycosidases
YPD4_0822	SSF74650	Galactose mutarotase-like
YPD4_0823	SSF103473	MFS general substrate transporter
YPD4_0824	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0824	SSF53822	Periplasmic binding protein-like I
YPD4_0825	SSF52317	Class I glutamine amidotransferase-like
YPD4_0826	SSF51569	Aldolase
YPD4_0828	SSF53649	Alkaline phosphatase-like
YPD4_0829	SSF102114	Radical SAM enzymes
YPD4_0830	SSF48208	Six-hairpin glycosidases
YPD4_0831	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0832	SSF51338	Composite domain of metallo-dependent hydrolases
YPD4_0832	SSF51556	Metallo-dependent hydrolases
YPD4_0833	SSF53062	PTS system fructose IIA component-like
YPD4_0836	SSF52728	PTS IIb component
YPD4_0837	SSF53697	SIS domain
YPD4_0838	SSF51569	Aldolase
YPD4_0839	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_0839	SSF46785	"Winged helix" DNA-binding domain
YPD4_0840	SSF53649	Alkaline phosphatase-like
YPD4_0841	SSF143422	Transposase IS200-like
YPD4_0842	SSF46689	Homeodomain-like
YPD4_0842	SSF53098	Ribonuclease H-like
YPD4_0843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0844	SSF48230	Chondroitin AC/alginate lyase
YPD4_0844	SSF49785	Galactose-binding domain-like
YPD4_0844	SSF49863	Hyaluronate lyase-like, C-terminal domain
YPD4_0844	SSF74650	Galactose mutarotase-like
YPD4_0845	SSF103515	Autotransporter
YPD4_0847	SSF53056	beta-carbonic anhydrase, cab
YPD4_0848	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0851	SSF160246	EspE N-terminal domain-like
YPD4_0851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0853	SSF54523	Pili subunits
YPD4_0854	SSF54523	Pili subunits
YPD4_0855	SSF158544	GspK insert domain-like
YPD4_0856	SSF53067	Actin-like ATPase domain
YPD4_0860	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_0861	SSF47170	Aspartate receptor, ligand-binding domain
YPD4_0861	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_0862	SSF52833	Thioredoxin-like
YPD4_0863	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_0864	SSF46785	"Winged helix" DNA-binding domain
YPD4_0864	SSF53850	Periplasmic binding protein-like II
YPD4_0865	SSF103473	MFS general substrate transporter
YPD4_0866	SSF46785	"Winged helix" DNA-binding domain
YPD4_0866	SSF53850	Periplasmic binding protein-like II
YPD4_0867	SSF50621	Alanine racemase C-terminal domain-like
YPD4_0867	SSF51419	PLP-binding barrel
YPD4_0868	SSF47413	lambda repressor-like DNA-binding domains
YPD4_0868	SSF53822	Periplasmic binding protein-like I
YPD4_0869	SSF50692	ADC-like
YPD4_0869	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_0870	SSF56801	Acetyl-CoA synthetase-like
YPD4_0870	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPD4_0871	SSF103473	MFS general substrate transporter
YPD4_0872	SSF51430	NAD(P)-linked oxidoreductase
YPD4_0873	SSF52980	Restriction endonuclease-like
YPD4_0874	SSF55811	Nudix
YPD4_0875	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YPD4_0875	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_0875	SSF52009	Phosphohistidine domain
YPD4_0875	SSF55781	GAF domain-like
YPD4_0877	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
YPD4_0878	SSF46689	Homeodomain-like
YPD4_0878	SSF53098	Ribonuclease H-like
YPD4_0879	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0883	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0883	SSF52980	Restriction endonuclease-like
YPD4_0884	SSF63411	LuxS/MPP-like metallohydrolase
YPD4_0885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0886	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0886	SSF52980	Restriction endonuclease-like
YPD4_0887	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0888	SSF53633	Carbamate kinase-like
YPD4_0888	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_0889	SSF53187	Zn-dependent exopeptidases
YPD4_0890	SSF50685	Barwin-like endoglucanases
YPD4_0891	SSF69572	Activating enzymes of the ubiquitin-like proteins
YPD4_0892	SSF82649	SufE/NifU
YPD4_0893	SSF53383	PLP-dependent transferases
YPD4_0894	SSF46785	"Winged helix" DNA-binding domain
YPD4_0894	SSF53850	Periplasmic binding protein-like II
YPD4_0896	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0897	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YPD4_0897	SSF88723	PIN domain-like
YPD4_0898	SSF102405	MCP/YpsA-like
YPD4_0899	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPD4_0901	SSF143422	Transposase IS200-like
YPD4_0902	SSF158452	YqcC-like
YPD4_0903	SSF55120	Pseudouridine synthase
YPD4_0904	SSF52218	Flavoproteins
YPD4_0906	SSF51161	Trimeric LpxA-like enzymes
YPD4_0907	SSF109604	HD-domain/PDEase-like
YPD4_0907	SSF55021	ACT-like
YPD4_0907	SSF81301	Nucleotidyltransferase
YPD4_0907	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
YPD4_0907	SSF81891	Poly A polymerase C-terminal region-like
YPD4_0908	SSF55920	Creatinase/aminopeptidase
YPD4_0909	SSF52313	Ribosomal protein S2
YPD4_0910	SSF46934	UBA-like
YPD4_0910	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
YPD4_0911	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
YPD4_0912	SSF53633	Carbamate kinase-like
YPD4_0913	SSF55194	Ribosome recycling factor, RRF
YPD4_0914	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0914	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_0914	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
YPD4_0915	SSF64005	Undecaprenyl diphosphate synthase
YPD4_0917	SSF50156	PDZ domain-like
YPD4_0920	SSF111384	OmpH-like
YPD4_0921	SSF51161	Trimeric LpxA-like enzymes
YPD4_0922	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_0923	SSF51161	Trimeric LpxA-like enzymes
YPD4_0924	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_0925	SSF53098	Ribonuclease H-like
YPD4_0926	SSF89550	PHP domain-like
YPD4_0927	SSF52096	ClpP/crotonase
YPD4_0928	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YPD4_0929	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_0929	SSF56037	PheT/TilS domain
YPD4_0929	SSF82829	MesJ substrate recognition domain-like
YPD4_0930	SSF46626	Cytochrome c
YPD4_0931	SSF52980	Restriction endonuclease-like
YPD4_0932	SSF75620	Release factor
YPD4_0934	SSF52954	Class II aaRS ABD-related
YPD4_0934	SSF55681	Class II aaRS and biotin synthetases
YPD4_0934	SSF55826	YbaK/ProRS associated domain
YPD4_0935	SSF118196	YaeB-like
YPD4_0936	SSF53850	Periplasmic binding protein-like II
YPD4_0937	SSF161098	MetI-like
YPD4_0938	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0939	SSF56784	HAD-like
YPD4_0940	SSF51430	NAD(P)-linked oxidoreductase
YPD4_0942	SSF56219	DNase I-like
YPD4_0943	SSF53955	Lysozyme-like
YPD4_0943	SSF54106	LysM domain
YPD4_0944	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_0945	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_0946	SSF53098	Ribonuclease H-like
YPD4_0947	SSF53098	Ribonuclease H-like
YPD4_0949	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0950	SSF46689	Homeodomain-like
YPD4_0950	SSF53098	Ribonuclease H-like
YPD4_0951	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0953	SSF56349	DNA breaking-rejoining enzymes
YPD4_0956	SSF56349	DNA breaking-rejoining enzymes
YPD4_0957	SSF143422	Transposase IS200-like
YPD4_0958	SSF74982	Small protein B (SmpB)
YPD4_0959	SSF55961	Bet v1-like
YPD4_0961	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0962	SSF111331	NAD kinase/diacylglycerol kinase-like
YPD4_0963	SSF51064	Head domain of nucleotide exchange factor GrpE
YPD4_0963	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
YPD4_0964	SSF48256	Citrate synthase
YPD4_0965	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YPD4_0966	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YPD4_0966	SSF51905	FAD/NAD(P)-binding domain
YPD4_0966	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YPD4_0967	SSF46548	alpha-helical ferredoxin
YPD4_0967	SSF54292	2Fe-2S ferredoxin-like
YPD4_0968	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_0969	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YPD4_0969	SSF51230	Single hybrid motif
YPD4_0969	SSF52777	CoA-dependent acyltransferases
YPD4_0970	SSF52210	Succinyl-CoA synthetase domains
YPD4_0970	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_0971	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0971	SSF52210	Succinyl-CoA synthetase domains
YPD4_0976	SSF74653	TolA/TonB C-terminal domain
YPD4_0977	SSF52964	TolB, N-terminal domain
YPD4_0977	SSF69304	Tricorn protease N-terminal domain
YPD4_0978	SSF103088	OmpA-like
YPD4_0979	SSF48452	TPR-like
YPD4_0980	SSF142754	NadA-like
YPD4_0982	SSF161111	Cation efflux protein transmembrane domain-like
YPD4_0983	SSF51569	Aldolase
YPD4_0984	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0985	SSF53098	Ribonuclease H-like
YPD4_0986	SSF53254	Phosphoglycerate mutase-like
YPD4_0988	SSF74650	Galactose mutarotase-like
YPD4_0989	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_0989	SSF55060	GHMP Kinase, C-terminal domain
YPD4_0990	SSF54197	HIT-like
YPD4_0991	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_0993	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0994	SSF46785	"Winged helix" DNA-binding domain
YPD4_0994	SSF50331	MOP-like
YPD4_0995	SSF53850	Periplasmic binding protein-like II
YPD4_0996	SSF161098	MetI-like
YPD4_0997	SSF50331	MOP-like
YPD4_0997	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_0998	SSF56784	HAD-like
YPD4_0999	SSF50974	Nitrous oxide reductase, N-terminal domain
YPD4_1000	SSF53383	PLP-dependent transferases
YPD4_1001	SSF53383	PLP-dependent transferases
YPD4_1002	SSF102114	Radical SAM enzymes
YPD4_1003	SSF53383	PLP-dependent transferases
YPD4_1004	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1007	SSF46600	C-terminal UvrC-binding domain of UvrB
YPD4_1007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1008	SSF142338	CofD-like
YPD4_1009	SSF102114	Radical SAM enzymes
YPD4_1010	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
YPD4_1011	SSF54690	Molybdopterin synthase subunit MoaE
YPD4_1013	SSF143422	Transposase IS200-like
YPD4_1014	SSF51905	FAD/NAD(P)-binding domain
YPD4_1014	SSF54373	FAD-linked reductases, C-terminal domain
YPD4_1015	SSF53720	ALDH-like
YPD4_1016	SSF46689	Homeodomain-like
YPD4_1016	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPD4_1018	SSF46785	"Winged helix" DNA-binding domain
YPD4_1018	SSF53850	Periplasmic binding protein-like II
YPD4_1019	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1020	SSF53167	Purine and uridine phosphorylases
YPD4_1021	SSF103473	MFS general substrate transporter
YPD4_1022	SSF143422	Transposase IS200-like
YPD4_1023	SSF103473	MFS general substrate transporter
YPD4_1025	SSF103190	Sensory domain-like
YPD4_1025	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_1025	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_1025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_1026	SSF46689	Homeodomain-like
YPD4_1026	SSF52172	CheY-like
YPD4_1026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1027	SSF51395	FMN-linked oxidoreductases
YPD4_1028	SSF46785	"Winged helix" DNA-binding domain
YPD4_1028	SSF53850	Periplasmic binding protein-like II
YPD4_1029	SSF54909	Dimeric alpha+beta barrel
YPD4_1032	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1033	SSF111369	HlyD-like secretion proteins
YPD4_1034	SSF46689	Homeodomain-like
YPD4_1034	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPD4_1035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1041	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1042	SSF143422	Transposase IS200-like
YPD4_1044	SSF51395	FMN-linked oxidoreductases
YPD4_1045	SSF56601	beta-lactamase/transpeptidase-like
YPD4_1046	SSF55103	FAD-linked oxidases, C-terminal domain
YPD4_1046	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_1047	SSF55154	CYTH-like phosphatases
YPD4_1050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1051	SSF53850	Periplasmic binding protein-like II
YPD4_1052	SSF161098	MetI-like
YPD4_1053	SSF161098	MetI-like
YPD4_1055	SSF53822	Periplasmic binding protein-like I
YPD4_1056	SSF48371	ARM repeat
YPD4_1058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1059	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1061	SSF53383	PLP-dependent transferases
YPD4_1062	SSF52821	Rhodanese/Cell cycle control phosphatase
YPD4_1063	SSF53850	Periplasmic binding protein-like II
YPD4_1064	SSF53850	Periplasmic binding protein-like II
YPD4_1065	SSF161098	MetI-like
YPD4_1066	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1066	SSF54631	CBS-domain pair
YPD4_1067	SSF161098	MetI-like
YPD4_1069	SSF53383	PLP-dependent transferases
YPD4_1069	SSF55904	Ornithine decarboxylase C-terminal domain
YPD4_1070	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1071	SSF56935	Porins
YPD4_1072	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1073	SSF56634	Heme-dependent catalase-like
YPD4_1074	SSF56925	OMPA-like
YPD4_1076	SSF53218	Molybdenum cofactor biosynthesis proteins
YPD4_1077	SSF49772	Ecotin, trypsin inhibitor
YPD4_1078	SSF47240	Ferritin-like
YPD4_1079	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YPD4_1079	SSF51998	PFL-like glycyl radical enzymes
YPD4_1080	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1081	SSF101904	GyrA/ParC C-terminal domain-like
YPD4_1081	SSF56719	Type II DNA topoisomerase
YPD4_1082	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_1082	SSF52172	CheY-like
YPD4_1082	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_1083	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_1083	SSF52172	CheY-like
YPD4_1084	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPD4_1085	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_1086	SSF103473	MFS general substrate transporter
YPD4_1087	SSF56935	Porins
YPD4_1088	SSF143422	Transposase IS200-like
YPD4_1089	SSF56601	beta-lactamase/transpeptidase-like
YPD4_1090	SSF103473	MFS general substrate transporter
YPD4_1091	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_1092	SSF103190	Sensory domain-like
YPD4_1092	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_1093	SSF69917	OMPT-like
YPD4_1094	SSF47413	lambda repressor-like DNA-binding domains
YPD4_1094	SSF51306	LexA/Signal peptidase
YPD4_1096	SSF142764	YgbK-like
YPD4_1097	SSF53639	AraD/HMP-PK domain-like
YPD4_1098	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_1098	SSF46785	"Winged helix" DNA-binding domain
YPD4_1099	SSF51658	Xylose isomerase-like
YPD4_1105	SSF69279	Phage tail proteins
YPD4_1110	SSF88874	Receptor-binding domain of short tail fibre protein gp12
YPD4_1111	SSF46689	Homeodomain-like
YPD4_1111	SSF53697	SIS domain
YPD4_1112	SSF51445	(Trans)glycosidases
YPD4_1115	SSF54060	His-Me finger endonucleases
YPD4_1117	SSF53649	Alkaline phosphatase-like
YPD4_1119	SSF143422	Transposase IS200-like
YPD4_1120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1120	SSF57829	Zn-binding ribosomal proteins
YPD4_1121	SSF55120	Pseudouridine synthase
YPD4_1121	SSF55174	Alpha-L RNA-binding motif
YPD4_1122	SSF103473	MFS general substrate transporter
YPD4_1124	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1125	SSF161098	MetI-like
YPD4_1126	SSF161098	MetI-like
YPD4_1127	SSF53850	Periplasmic binding protein-like II
YPD4_1128	SSF141868	EAL domain-like
YPD4_1129	SSF54001	Cysteine proteinases
YPD4_1130	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPD4_1131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1132	SSF46785	"Winged helix" DNA-binding domain
YPD4_1132	SSF48008	GntR ligand-binding domain-like
YPD4_1133	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_1133	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1134	SSF51658	Xylose isomerase-like
YPD4_1135	SSF50104	Translation proteins SH3-like domain
YPD4_1135	SSF50249	Nucleic acid-binding proteins
YPD4_1137	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1138	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1138	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPD4_1139	SSF56529	FAH
YPD4_1140	SSF53720	ALDH-like
YPD4_1141	SSF53067	Actin-like ATPase domain
YPD4_1142	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_1142	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
YPD4_1143	SSF53822	Periplasmic binding protein-like I
YPD4_1144	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1146	SSF55811	Nudix
YPD4_1147	SSF55594	HPr-like
YPD4_1147	SSF55804	Phoshotransferase/anion transport protein
YPD4_1148	SSF53613	Ribokinase-like
YPD4_1149	SSF52794	PTS system IIB component-like
YPD4_1150	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_1153	SSF49354	PapD-like
YPD4_1153	SSF49584	Periplasmic chaperone C-domain
YPD4_1154	SSF141729	FimD N-terminal domain-like
YPD4_1155	SSF51658	Xylose isomerase-like
YPD4_1158	SSF46785	"Winged helix" DNA-binding domain
YPD4_1158	SSF53850	Periplasmic binding protein-like II
YPD4_1160	SSF53807	"Helical backbone" metal receptor
YPD4_1161	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1162	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1163	SSF56935	Porins
YPD4_1164	SSF47616	GST C-terminal domain-like
YPD4_1164	SSF52833	Thioredoxin-like
YPD4_1165	SSF56784	HAD-like
YPD4_1166	SSF51197	Clavaminate synthase-like
YPD4_1167	SSF53850	Periplasmic binding protein-like II
YPD4_1168	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1168	SSF55021	ACT-like
YPD4_1169	SSF161098	MetI-like
YPD4_1170	SSF56601	beta-lactamase/transpeptidase-like
YPD4_1170	SSF69189	Penicillin-binding protein associated domain
YPD4_1172	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_1173	SSF51569	Aldolase
YPD4_1174	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPD4_1175	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPD4_1176	SSF116726	TrkA C-terminal domain-like
YPD4_1178	SSF53850	Periplasmic binding protein-like II
YPD4_1179	SSF50331	MOP-like
YPD4_1179	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1180	SSF161098	MetI-like
YPD4_1181	SSF161098	MetI-like
YPD4_1183	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1184	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1185	SSF53850	Periplasmic binding protein-like II
YPD4_1186	SSF117892	Band 7/SPFH domain
YPD4_1187	SSF53807	"Helical backbone" metal receptor
YPD4_1188	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1189	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1191	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1192	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1193	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1194	SSF161098	MetI-like
YPD4_1195	SSF161098	MetI-like
YPD4_1196	SSF53850	Periplasmic binding protein-like II
YPD4_1197	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1198	SSF48600	Chorismate mutase II
YPD4_1200	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1201	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1202	SSF53383	PLP-dependent transferases
YPD4_1203	SSF52467	DHS-like NAD/FAD-binding domain
YPD4_1203	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_1204	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_1204	SSF54292	2Fe-2S ferredoxin-like
YPD4_1204	SSF63380	Riboflavin synthase domain-like
YPD4_1205	SSF56821	Prismane protein-like
YPD4_1207	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1209	SSF111369	HlyD-like secretion proteins
YPD4_1210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1211	SSF54736	ClpS-like
YPD4_1212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1212	SSF81923	Double Clp-N motif
YPD4_1213	SSF143422	Transposase IS200-like
YPD4_1214	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_1215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1215	SSF90123	ABC transporter transmembrane region
YPD4_1216	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1216	SSF90123	ABC transporter transmembrane region
YPD4_1217	SSF51905	FAD/NAD(P)-binding domain
YPD4_1218	SSF46785	"Winged helix" DNA-binding domain
YPD4_1218	SSF54909	Dimeric alpha+beta barrel
YPD4_1219	SSF46785	"Winged helix" DNA-binding domain
YPD4_1219	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1219	SSF81995	beta-sandwich domain of Sec23/24
YPD4_1220	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
YPD4_1221	SSF48019	post-AAA+ oligomerization domain-like
YPD4_1221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1222	SSF46589	tRNA-binding arm
YPD4_1222	SSF55681	Class II aaRS and biotin synthetases
YPD4_1223	SSF103473	MFS general substrate transporter
YPD4_1224	SSF102114	Radical SAM enzymes
YPD4_1226	SSF51998	PFL-like glycyl radical enzymes
YPD4_1227	SSF51998	PFL-like glycyl radical enzymes
YPD4_1230	SSF53774	Glutaminase/Asparaginase
YPD4_1231	SSF101967	Adhesin YadA, collagen-binding domain
YPD4_1231	SSF54523	Pili subunits
YPD4_1232	SSF54523	Pili subunits
YPD4_1233	SSF53383	PLP-dependent transferases
YPD4_1234	SSF55205	EPT/RTPC-like
YPD4_1235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1236	SSF50249	Nucleic acid-binding proteins
YPD4_1237	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_1238	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1238	SSF90123	ABC transporter transmembrane region
YPD4_1239	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1241	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_1242	SSF56112	Protein kinase-like (PK-like)
YPD4_1243	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1244	SSF140570	MukF C-terminal domain-like
YPD4_1244	SSF46785	"Winged helix" DNA-binding domain
YPD4_1246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1247	SSF143422	Transposase IS200-like
YPD4_1248	SSF47090	PGBD-like
YPD4_1249	SSF141523	L,D-transpeptidase catalytic domain-like
YPD4_1250	SSF55166	Hedgehog/DD-peptidase
YPD4_1251	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_1252	SSF53383	PLP-dependent transferases
YPD4_1253	SSF56935	Porins
YPD4_1254	SSF50249	Nucleic acid-binding proteins
YPD4_1254	SSF55681	Class II aaRS and biotin synthetases
YPD4_1255	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YPD4_1255	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YPD4_1256	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPD4_1256	SSF63737	Leukotriene A4 hydrolase N-terminal domain
YPD4_1258	SSF51395	FMN-linked oxidoreductases
YPD4_1260	SSF141673	MOSC N-terminal domain-like
YPD4_1260	SSF50800	PK beta-barrel domain-like
YPD4_1260	SSF54292	2Fe-2S ferredoxin-like
YPD4_1261	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1262	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1265	SSF159594	XCC0632-like
YPD4_1266	SSF143422	Transposase IS200-like
YPD4_1267	SSF53901	Thiolase-like
YPD4_1268	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1269	SSF46689	Homeodomain-like
YPD4_1269	SSF53098	Ribonuclease H-like
YPD4_1270	SSF53901	Thiolase-like
YPD4_1271	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_1272	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_1274	SSF143422	Transposase IS200-like
YPD4_1275	SSF103088	OmpA-like
YPD4_1275	SSF56925	OMPA-like
YPD4_1276	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1277	SSF159894	YgaC/TfoX-N like
YPD4_1280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1281	SSF52335	Methylglyoxal synthase-like
YPD4_1283	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1284	SSF141255	YccV-like
YPD4_1285	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1285	SSF88697	PUA domain-like
YPD4_1286	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
YPD4_1289	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_1289	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_1290	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1291	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_1292	SSF53901	Thiolase-like
YPD4_1293	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1294	SSF53901	Thiolase-like
YPD4_1295	SSF52096	ClpP/crotonase
YPD4_1296	SSF52096	ClpP/crotonase
YPD4_1297	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1299	SSF52151	FabD/lysophospholipase-like
YPD4_1299	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YPD4_1304	SSF103088	OmpA-like
YPD4_1305	SSF141452	Hcp1-like
YPD4_1306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1306	SSF81923	Double Clp-N motif
YPD4_1307	SSF69255	gp5 N-terminal domain-like
YPD4_1307	SSF69279	Phage tail proteins
YPD4_1308	SSF53955	Lysozyme-like
YPD4_1310	SSF51261	Duplicated hybrid motif
YPD4_1310	SSF53955	Lysozyme-like
YPD4_1312	SSF51261	Duplicated hybrid motif
YPD4_1312	SSF53955	Lysozyme-like
YPD4_1322	SSF160719	gpW/gp25-like
YPD4_1325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1328	SSF69572	Activating enzymes of the ubiquitin-like proteins
YPD4_1329	SSF53218	Molybdenum cofactor biosynthesis proteins
YPD4_1329	SSF63867	MoeA C-terminal domain-like
YPD4_1329	SSF63882	MoeA N-terminal region -like
YPD4_1330	SSF102114	Radical SAM enzymes
YPD4_1331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1334	SSF53474	alpha/beta-Hydrolases
YPD4_1335	SSF50129	GroES-like
YPD4_1335	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1336	SSF46785	"Winged helix" DNA-binding domain
YPD4_1336	SSF53850	Periplasmic binding protein-like II
YPD4_1337	SSF103473	MFS general substrate transporter
YPD4_1338	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPD4_1340	SSF53822	Periplasmic binding protein-like I
YPD4_1341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1344	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1344	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPD4_1345	SSF53927	Cytidine deaminase-like
YPD4_1348	SSF103473	MFS general substrate transporter
YPD4_1349	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
YPD4_1350	SSF53822	Periplasmic binding protein-like I
YPD4_1352	SSF143422	Transposase IS200-like
YPD4_1353	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPD4_1353	SSF50249	Nucleic acid-binding proteins
YPD4_1353	SSF52374	Nucleotidylyl transferase
YPD4_1353	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
YPD4_1354	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YPD4_1354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1356	SSF51283	dUTPase-like
YPD4_1358	SSF54631	CBS-domain pair
YPD4_1358	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_1360	SSF53383	PLP-dependent transferases
YPD4_1361	SSF51905	FAD/NAD(P)-binding domain
YPD4_1362	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_1364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1365	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1366	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1367	SSF53807	"Helical backbone" metal receptor
YPD4_1368	SSF56935	Porins
YPD4_1370	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_1371	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_1372	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_1372	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1373	SSF101386	all-alpha NTP pyrophosphatases
YPD4_1373	SSF141734	HisI-like
YPD4_1374	SSF51366	Ribulose-phoshate binding barrel
YPD4_1375	SSF51366	Ribulose-phoshate binding barrel
YPD4_1376	SSF52317	Class I glutamine amidotransferase-like
YPD4_1377	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_1377	SSF56784	HAD-like
YPD4_1378	SSF53383	PLP-dependent transferases
YPD4_1379	SSF53720	ALDH-like
YPD4_1380	SSF53850	Periplasmic binding protein-like II
YPD4_1380	SSF54913	GlnB-like
YPD4_1381	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1384	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1386	SSF56796	Dehydroquinate synthase-like
YPD4_1388	SSF53098	Ribonuclease H-like
YPD4_1389	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1391	SSF49373	Invasin/intimin cell-adhesion fragments
YPD4_1392	SSF103473	MFS general substrate transporter
YPD4_1394	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1395	SSF56529	FAH
YPD4_1396	SSF51604	Enolase C-terminal domain-like
YPD4_1396	SSF54826	Enolase N-terminal domain-like
YPD4_1397	SSF51395	FMN-linked oxidoreductases
YPD4_1398	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_1398	SSF69864	Argininosuccinate synthetase, C-terminal domain
YPD4_1400	SSF103473	MFS general substrate transporter
YPD4_1401	SSF88713	Glycoside hydrolase/deacetylase
YPD4_1404	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_1404	SSF52172	CheY-like
YPD4_1408	SSF56214	4'-phosphopantetheinyl transferase
YPD4_1409	SSF51445	(Trans)glycosidases
YPD4_1410	SSF103473	MFS general substrate transporter
YPD4_1412	SSF56784	HAD-like
YPD4_1414	SSF56112	Protein kinase-like (PK-like)
YPD4_1415	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1416	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1418	SSF53807	"Helical backbone" metal receptor
YPD4_1419	SSF53955	Lysozyme-like
YPD4_1421	SSF52954	Class II aaRS ABD-related
YPD4_1421	SSF55186	ThrRS/AlaRS common domain
YPD4_1421	SSF55681	Class II aaRS and biotin synthetases
YPD4_1421	SSF81271	TGS-like
YPD4_1422	SSF55200	Translation initiation factor IF3, C-terminal domain
YPD4_1423	SSF74731	Ribosomal protein L20
YPD4_1424	SSF46589	tRNA-binding arm
YPD4_1424	SSF55681	Class II aaRS and biotin synthetases
YPD4_1425	SSF46955	Putative DNA-binding domain
YPD4_1425	SSF50249	Nucleic acid-binding proteins
YPD4_1425	SSF54991	Anticodon-binding domain of PheRS
YPD4_1425	SSF55681	Class II aaRS and biotin synthetases
YPD4_1425	SSF56037	PheT/TilS domain
YPD4_1427	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1428	SSF52833	Thioredoxin-like
YPD4_1429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1430	SSF53383	PLP-dependent transferases
YPD4_1431	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_1432	SSF50486	FMT C-terminal domain-like
YPD4_1432	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1432	SSF53328	Formyltransferase
YPD4_1433	SSF88713	Glycoside hydrolase/deacetylase
YPD4_1435	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1436	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1437	SSF54001	Cysteine proteinases
YPD4_1438	SSF55681	Class II aaRS and biotin synthetases
YPD4_1438	SSF82649	SufE/NifU
YPD4_1441	SSF51569	Aldolase
YPD4_1442	SSF47454	A DNA-binding domain in eukaryotic transcription factors
YPD4_1443	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_1443	SSF52009	Phosphohistidine domain
YPD4_1443	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_1445	SSF46548	alpha-helical ferredoxin
YPD4_1445	SSF55103	FAD-linked oxidases, C-terminal domain
YPD4_1445	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_1446	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_1447	SSF89360	HesB-like domain
YPD4_1448	SSF101960	Stabilizer of iron transporter SufD
YPD4_1449	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1450	SSF101960	Stabilizer of iron transporter SufD
YPD4_1451	SSF53383	PLP-dependent transferases
YPD4_1452	SSF82649	SufE/NifU
YPD4_1453	SSF141523	L,D-transpeptidase catalytic domain-like
YPD4_1454	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1455	SSF46689	Homeodomain-like
YPD4_1455	SSF53098	Ribonuclease H-like
YPD4_1456	SSF143422	Transposase IS200-like
YPD4_1457	SSF50800	PK beta-barrel domain-like
YPD4_1457	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_1457	SSF52935	PK C-terminal domain-like
YPD4_1460	SSF63380	Riboflavin synthase domain-like
YPD4_1461	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1462	SSF103473	MFS general substrate transporter
YPD4_1463	SSF46785	"Winged helix" DNA-binding domain
YPD4_1463	SSF53850	Periplasmic binding protein-like II
YPD4_1464	SSF47413	lambda repressor-like DNA-binding domains
YPD4_1464	SSF53822	Periplasmic binding protein-like I
YPD4_1465	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YPD4_1465	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YPD4_1466	SSF54001	Cysteine proteinases
YPD4_1467	SSF52833	Thioredoxin-like
YPD4_1468	SSF53098	Ribonuclease H-like
YPD4_1469	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YPD4_1471	SSF51395	FMN-linked oxidoreductases
YPD4_1472	SSF46689	Homeodomain-like
YPD4_1472	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPD4_1473	SSF53649	Alkaline phosphatase-like
YPD4_1474	SSF51430	NAD(P)-linked oxidoreductase
YPD4_1475	SSF46785	"Winged helix" DNA-binding domain
YPD4_1477	SSF53067	Actin-like ATPase domain
YPD4_1478	SSF141488	YdhA-like
YPD4_1479	SSF50475	FMN-binding split barrel
YPD4_1480	SSF52374	Nucleotidylyl transferase
YPD4_1480	SSF55174	Alpha-L RNA-binding motif
YPD4_1481	SSF53613	Ribokinase-like
YPD4_1482	SSF47616	GST C-terminal domain-like
YPD4_1482	SSF52833	Thioredoxin-like
YPD4_1484	SSF103473	MFS general substrate transporter
YPD4_1485	SSF69118	AhpD-like
YPD4_1486	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1487	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1488	SSF161098	MetI-like
YPD4_1489	SSF161098	MetI-like
YPD4_1490	SSF53850	Periplasmic binding protein-like II
YPD4_1491	SSF143422	Transposase IS200-like
YPD4_1492	SSF46689	Homeodomain-like
YPD4_1492	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1500	SSF46689	Homeodomain-like
YPD4_1500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1500	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_1501	SSF143422	Transposase IS200-like
YPD4_1502	SSF52833	Thioredoxin-like
YPD4_1503	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1504	SSF46689	Homeodomain-like
YPD4_1504	SSF53098	Ribonuclease H-like
YPD4_1507	SSF49354	PapD-like
YPD4_1512	SSF55781	GAF domain-like
YPD4_1513	SSF48657	FinO-like
YPD4_1514	SSF50156	PDZ domain-like
YPD4_1514	SSF52096	ClpP/crotonase
YPD4_1516	SSF49401	Bacterial adhesins
YPD4_1517	SSF49354	PapD-like
YPD4_1517	SSF49584	Periplasmic chaperone C-domain
YPD4_1518	SSF141729	FimD N-terminal domain-like
YPD4_1519	SSF49401	Bacterial adhesins
YPD4_1520	SSF49354	PapD-like
YPD4_1520	SSF49584	Periplasmic chaperone C-domain
YPD4_1521	SSF103473	MFS general substrate transporter
YPD4_1522	SSF103473	MFS general substrate transporter
YPD4_1523	SSF82171	DPP6 N-terminal domain-like
YPD4_1524	SSF46785	"Winged helix" DNA-binding domain
YPD4_1524	SSF55781	GAF domain-like
YPD4_1525	SSF47090	PGBD-like
YPD4_1525	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YPD4_1526	SSF118215	Proton glutamate symport protein
YPD4_1528	SSF56935	Porins
YPD4_1529	SSF53850	Periplasmic binding protein-like II
YPD4_1530	SSF50331	MOP-like
YPD4_1530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1531	SSF161098	MetI-like
YPD4_1532	SSF161098	MetI-like
YPD4_1534	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1535	SSF51182	RmlC-like cupins
YPD4_1536	SSF51182	RmlC-like cupins
YPD4_1538	SSF47413	lambda repressor-like DNA-binding domains
YPD4_1538	SSF53822	Periplasmic binding protein-like I
YPD4_1539	SSF46689	Homeodomain-like
YPD4_1539	SSF53098	Ribonuclease H-like
YPD4_1540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1541	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPD4_1542	SSF56112	Protein kinase-like (PK-like)
YPD4_1543	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1543	SSF90123	ABC transporter transmembrane region
YPD4_1544	SSF46689	Homeodomain-like
YPD4_1547	SSF56925	OMPA-like
YPD4_1548	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
YPD4_1549	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1550	SSF55073	Nucleotide cyclase
YPD4_1550	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_1551	SSF56935	Porins
YPD4_1556	SSF52728	PTS IIb component
YPD4_1556	SSF53062	PTS system fructose IIA component-like
YPD4_1557	SSF54631	CBS-domain pair
YPD4_1557	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_1558	SSF46785	"Winged helix" DNA-binding domain
YPD4_1559	SSF56529	FAH
YPD4_1560	SSF56529	FAH
YPD4_1561	SSF53720	ALDH-like
YPD4_1562	SSF53213	LigB-like
YPD4_1563	SSF55331	Tautomerase/MIF
YPD4_1564	SSF56529	FAH
YPD4_1565	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_1566	SSF103473	MFS general substrate transporter
YPD4_1567	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YPD4_1567	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YPD4_1568	SSF50475	FMN-binding split barrel
YPD4_1569	SSF143548	Serine metabolism enzymes domain
YPD4_1570	SSF55811	Nudix
YPD4_1571	SSF56322	ADC synthase
YPD4_1572	SSF51246	Rudiment single hybrid motif
YPD4_1572	SSF52440	PreATP-grasp domain
YPD4_1572	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_1573	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1575	SSF88697	PUA domain-like
YPD4_1577	SSF50993	Peptidase/esterase 'gauge' domain
YPD4_1577	SSF53474	alpha/beta-Hydrolases
YPD4_1578	SSF53474	alpha/beta-Hydrolases
YPD4_1579	SSF47240	Ferritin-like
YPD4_1580	SSF81296	E set domains
YPD4_1585	SSF160544	EscU C-terminal domain-like
YPD4_1589	SSF143422	Transposase IS200-like
YPD4_1590	SSF49373	Invasin/intimin cell-adhesion fragments
YPD4_1590	SSF56436	C-type lectin-like
YPD4_1591	SSF140566	FlgN-like
YPD4_1592	SSF101498	Anti-sigma factor FlgM
YPD4_1597	SSF117143	Flagellar hook protein flgE
YPD4_1598	SSF117143	Flagellar hook protein flgE
YPD4_1599	SSF117143	Flagellar hook protein flgE
YPD4_1603	SSF64518	Phase 1 flagellin
YPD4_1604	SSF64518	Phase 1 flagellin
YPD4_1605	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_1605	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPD4_1606	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1606	SSF53639	AraD/HMP-PK domain-like
YPD4_1608	SSF53822	Periplasmic binding protein-like I
YPD4_1609	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1611	SSF53613	Ribokinase-like
YPD4_1612	SSF143100	TTHA1013/TTHA0281-like
YPD4_1616	SSF101801	Surface presentation of antigens (SPOA)
YPD4_1617	SSF101801	Surface presentation of antigens (SPOA)
YPD4_1617	SSF103039	CheC-like
YPD4_1621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1622	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1624	SSF48029	FliG
YPD4_1627	SSF48150	DNA-glycosylase
YPD4_1628	SSF109604	HD-domain/PDEase-like
YPD4_1629	SSF55781	GAF domain-like
YPD4_1630	SSF46689	Homeodomain-like
YPD4_1630	SSF51215	Regulatory protein AraC
YPD4_1631	SSF101116	Flagellar export chaperone FliS
YPD4_1633	SSF64518	Phase 1 flagellin
YPD4_1634	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPD4_1634	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPD4_1636	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_1637	SSF53850	Periplasmic binding protein-like II
YPD4_1638	SSF161098	MetI-like
YPD4_1639	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1640	SSF46785	"Winged helix" DNA-binding domain
YPD4_1641	SSF47598	Ribbon-helix-helix
YPD4_1641	SSF51730	FAD-linked oxidoreductase
YPD4_1641	SSF53720	ALDH-like
YPD4_1641	SSF81935	N-terminal domain of bifunctional PutA protein
YPD4_1644	SSF49503	Cupredoxins
YPD4_1645	SSF54909	Dimeric alpha+beta barrel
YPD4_1646	SSF52218	Flavoproteins
YPD4_1647	SSF117281	Kelch motif
YPD4_1649	SSF56925	OMPA-like
YPD4_1651	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_1651	SSF52172	CheY-like
YPD4_1652	SSF46600	C-terminal UvrC-binding domain of UvrB
YPD4_1652	SSF47781	RuvA domain 2-like
YPD4_1652	SSF82771	GIY-YIG endonuclease
YPD4_1654	SSF141452	Hcp1-like
YPD4_1655	SSF53098	Ribonuclease H-like
YPD4_1658	SSF52200	Toll/Interleukin receptor TIR domain
YPD4_1663	SSF46785	"Winged helix" DNA-binding domain
YPD4_1663	SSF64288	Chorismate lyase-like
YPD4_1664	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1664	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_1665	SSF53850	Periplasmic binding protein-like II
YPD4_1666	SSF161098	MetI-like
YPD4_1667	SSF161098	MetI-like
YPD4_1668	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1669	SSF46689	Homeodomain-like
YPD4_1669	SSF53098	Ribonuclease H-like
YPD4_1670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1673	SSF56935	Porins
YPD4_1674	SSF56801	Acetyl-CoA synthetase-like
YPD4_1675	SSF53474	alpha/beta-Hydrolases
YPD4_1676	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1677	SSF47336	ACP-like
YPD4_1677	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1677	SSF52151	FabD/lysophospholipase-like
YPD4_1677	SSF52777	CoA-dependent acyltransferases
YPD4_1677	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1677	SSF53474	alpha/beta-Hydrolases
YPD4_1677	SSF53901	Thiolase-like
YPD4_1677	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YPD4_1678	SSF47336	ACP-like
YPD4_1678	SSF52777	CoA-dependent acyltransferases
YPD4_1678	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1678	SSF56801	Acetyl-CoA synthetase-like
YPD4_1679	SSF46689	Homeodomain-like
YPD4_1680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1680	SSF90123	ABC transporter transmembrane region
YPD4_1681	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1681	SSF90123	ABC transporter transmembrane region
YPD4_1682	SSF103473	MFS general substrate transporter
YPD4_1683	SSF56322	ADC synthase
YPD4_1684	SSF56349	DNA breaking-rejoining enzymes
YPD4_1685	SSF49354	PapD-like
YPD4_1685	SSF49584	Periplasmic chaperone C-domain
YPD4_1686	SSF49401	Bacterial adhesins
YPD4_1688	SSF141729	FimD N-terminal domain-like
YPD4_1689	SSF49354	PapD-like
YPD4_1689	SSF49584	Periplasmic chaperone C-domain
YPD4_1690	SSF49401	Bacterial adhesins
YPD4_1691	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_1691	SSF52172	CheY-like
YPD4_1691	SSF53850	Periplasmic binding protein-like II
YPD4_1691	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_1692	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_1692	SSF52172	CheY-like
YPD4_1693	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_1694	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_1695	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_1696	SSF46785	"Winged helix" DNA-binding domain
YPD4_1696	SSF53850	Periplasmic binding protein-like II
YPD4_1697	SSF49478	Cna protein B-type domain
YPD4_1699	SSF103473	MFS general substrate transporter
YPD4_1700	SSF51556	Metallo-dependent hydrolases
YPD4_1701	SSF46785	"Winged helix" DNA-binding domain
YPD4_1701	SSF53850	Periplasmic binding protein-like II
YPD4_1703	SSF53383	PLP-dependent transferases
YPD4_1705	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_1705	SSF46785	"Winged helix" DNA-binding domain
YPD4_1706	SSF56601	beta-lactamase/transpeptidase-like
YPD4_1707	SSF103473	MFS general substrate transporter
YPD4_1713	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1714	SSF52833	Thioredoxin-like
YPD4_1715	SSF46626	Cytochrome c
YPD4_1716	SSF51197	Clavaminate synthase-like
YPD4_1716	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1717	SSF53092	Creatinase/prolidase N-terminal domain
YPD4_1717	SSF55920	Creatinase/aminopeptidase
YPD4_1718	SSF48452	TPR-like
YPD4_1719	SSF88713	Glycoside hydrolase/deacetylase
YPD4_1720	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_1722	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_1723	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1725	SSF158472	HAMP domain-like
YPD4_1725	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_1726	SSF46785	"Winged helix" DNA-binding domain
YPD4_1726	SSF53383	PLP-dependent transferases
YPD4_1727	SSF53383	PLP-dependent transferases
YPD4_1728	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_1729	SSF53720	ALDH-like
YPD4_1730	SSF55909	Pentein
YPD4_1731	SSF53187	Zn-dependent exopeptidases
YPD4_1732	SSF56935	Porins
YPD4_1733	SSF46689	Homeodomain-like
YPD4_1733	SSF53098	Ribonuclease H-like
YPD4_1734	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1735	SSF53187	Zn-dependent exopeptidases
YPD4_1736	SSF51338	Composite domain of metallo-dependent hydrolases
YPD4_1736	SSF51556	Metallo-dependent hydrolases
YPD4_1737	SSF46785	"Winged helix" DNA-binding domain
YPD4_1737	SSF64288	Chorismate lyase-like
YPD4_1738	SSF51338	Composite domain of metallo-dependent hydrolases
YPD4_1738	SSF51556	Metallo-dependent hydrolases
YPD4_1739	SSF51182	RmlC-like cupins
YPD4_1740	SSF56322	ADC synthase
YPD4_1741	SSF53901	Thiolase-like
YPD4_1742	SSF53901	Thiolase-like
YPD4_1743	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1744	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_1746	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1747	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_1749	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_1753	SSF81901	HCP-like
YPD4_1753	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
YPD4_1754	SSF81901	HCP-like
YPD4_1755	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YPD4_1756	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1757	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1758	SSF51182	RmlC-like cupins
YPD4_1759	SSF51182	RmlC-like cupins
YPD4_1760	SSF48371	ARM repeat
YPD4_1761	SSF53474	alpha/beta-Hydrolases
YPD4_1762	SSF51182	RmlC-like cupins
YPD4_1763	SSF69118	AhpD-like
YPD4_1764	SSF158472	HAMP domain-like
YPD4_1764	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_1764	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_1765	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_1765	SSF52172	CheY-like
YPD4_1766	SSF53474	alpha/beta-Hydrolases
YPD4_1767	SSF52218	Flavoproteins
YPD4_1768	SSF81342	Transmembrane di-heme cytochromes
YPD4_1770	SSF53822	Periplasmic binding protein-like I
YPD4_1771	SSF53474	alpha/beta-Hydrolases
YPD4_1772	SSF52821	Rhodanese/Cell cycle control phosphatase
YPD4_1773	SSF53098	Ribonuclease H-like
YPD4_1774	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1774	SSF81271	TGS-like
YPD4_1775	SSF53178	Peptidyl-tRNA hydrolase-like
YPD4_1776	SSF53271	PRTase-like
YPD4_1777	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_1777	SSF55060	GHMP Kinase, C-terminal domain
YPD4_1778	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
YPD4_1779	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1779	SSF69075	Glutamyl tRNA-reductase dimerization domain
YPD4_1779	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
YPD4_1780	SSF75620	Release factor
YPD4_1781	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1783	SSF48452	TPR-like
YPD4_1784	SSF51569	Aldolase
YPD4_1785	SSF52091	SpoIIaa-like
YPD4_1787	SSF51695	PLC-like phosphodiesterases
YPD4_1788	SSF53850	Periplasmic binding protein-like II
YPD4_1789	SSF161098	MetI-like
YPD4_1790	SSF161098	MetI-like
YPD4_1791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1792	SSF143422	Transposase IS200-like
YPD4_1793	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1794	SSF51695	PLC-like phosphodiesterases
YPD4_1795	SSF46785	"Winged helix" DNA-binding domain
YPD4_1795	SSF53067	Actin-like ATPase domain
YPD4_1796	SSF89550	PHP domain-like
YPD4_1797	SSF89155	TorD-like
YPD4_1799	SSF103473	MFS general substrate transporter
YPD4_1800	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_1801	SSF46785	"Winged helix" DNA-binding domain
YPD4_1801	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1801	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_1805	SSF51126	Pectin lyase-like
YPD4_1806	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPD4_1806	SSF52374	Nucleotidylyl transferase
YPD4_1806	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
YPD4_1807	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YPD4_1808	SSF110395	CutC-like
YPD4_1809	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1810	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1811	SSF161084	MAPEG domain-like
YPD4_1812	SSF117396	TM1631-like
YPD4_1813	SSF50249	Nucleic acid-binding proteins
YPD4_1813	SSF55261	GAD domain-like
YPD4_1813	SSF55681	Class II aaRS and biotin synthetases
YPD4_1814	SSF55811	Nudix
YPD4_1815	SSF75625	YebC-like
YPD4_1816	SSF53098	Ribonuclease H-like
YPD4_1817	SSF46929	DNA helicase RuvA subunit, C-terminal domain
YPD4_1817	SSF47781	RuvA domain 2-like
YPD4_1817	SSF50249	Nucleic acid-binding proteins
YPD4_1818	SSF46785	"Winged helix" DNA-binding domain
YPD4_1818	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1819	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_1820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1821	SSF53807	"Helical backbone" metal receptor
YPD4_1822	SSF51261	Duplicated hybrid motif
YPD4_1824	SSF50800	PK beta-barrel domain-like
YPD4_1824	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_1824	SSF52935	PK C-terminal domain-like
YPD4_1825	SSF46689	Homeodomain-like
YPD4_1825	SSF53697	SIS domain
YPD4_1826	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1826	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_1827	SSF51569	Aldolase
YPD4_1828	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1829	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1830	SSF55298	YjgF-like
YPD4_1831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1832	SSF53067	Actin-like ATPase domain
YPD4_1834	SSF56801	Acetyl-CoA synthetase-like
YPD4_1835	SSF47819	HRDC-like
YPD4_1835	SSF53098	Ribonuclease H-like
YPD4_1836	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1837	SSF63848	Cell-division inhibitor MinC, C-terminal domain
YPD4_1838	SSF53955	Lysozyme-like
YPD4_1839	SSF56529	FAH
YPD4_1841	SSF56349	DNA breaking-rejoining enzymes
YPD4_1842	SSF46689	Homeodomain-like
YPD4_1842	SSF53098	Ribonuclease H-like
YPD4_1843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1844	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_1845	SSF103370	NinB
YPD4_1848	SSF53955	Lysozyme-like
YPD4_1860	SSF49373	Invasin/intimin cell-adhesion fragments
YPD4_1865	SSF49373	Invasin/intimin cell-adhesion fragments
YPD4_1869	SSF143422	Transposase IS200-like
YPD4_1871	SSF102712	JAB1/MPN domain
YPD4_1871	SSF54001	Cysteine proteinases
YPD4_1874	SSF49265	Fibronectin type III
YPD4_1879	SSF103473	MFS general substrate transporter
YPD4_1880	SSF53383	PLP-dependent transferases
YPD4_1883	SSF158442	DsbB-like
YPD4_1885	SSF46785	"Winged helix" DNA-binding domain
YPD4_1885	SSF48008	GntR ligand-binding domain-like
YPD4_1887	SSF51905	FAD/NAD(P)-binding domain
YPD4_1887	SSF54373	FAD-linked reductases, C-terminal domain
YPD4_1888	SSF103473	MFS general substrate transporter
YPD4_1889	SSF51182	RmlC-like cupins
YPD4_1890	SSF46785	"Winged helix" DNA-binding domain
YPD4_1890	SSF53850	Periplasmic binding protein-like II
YPD4_1891	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_1893	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1895	SSF74650	Galactose mutarotase-like
YPD4_1896	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1896	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_1897	SSF51316	Mss4-like
YPD4_1899	SSF52499	Isochorismatase-like hydrolases
YPD4_1900	SSF53774	Glutaminase/Asparaginase
YPD4_1901	SSF52096	ClpP/crotonase
YPD4_1902	SSF55469	FMN-dependent nitroreductase-like
YPD4_1903	SSF55326	PurM N-terminal domain-like
YPD4_1903	SSF56042	PurM C-terminal domain-like
YPD4_1904	SSF56712	Prokaryotic type I DNA topoisomerase
YPD4_1905	SSF55811	Nudix
YPD4_1906	SSF56219	DNase I-like
YPD4_1907	SSF46785	"Winged helix" DNA-binding domain
YPD4_1909	SSF53328	Formyltransferase
YPD4_1909	SSF55021	ACT-like
YPD4_1910	SSF103642	Sec-C motif
YPD4_1910	SSF54427	NTF2-like
YPD4_1911	SSF52172	CheY-like
YPD4_1912	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_1912	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1912	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
YPD4_1913	SSF81273	H-NS histone-like proteins
YPD4_1914	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1914	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPD4_1915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1916	SSF46689	Homeodomain-like
YPD4_1916	SSF53098	Ribonuclease H-like
YPD4_1917	SSF53720	ALDH-like
YPD4_1917	SSF56796	Dehydroquinate synthase-like
YPD4_1918	SSF53720	ALDH-like
YPD4_1920	SSF53850	Periplasmic binding protein-like II
YPD4_1921	SSF161098	MetI-like
YPD4_1922	SSF161098	MetI-like
YPD4_1923	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1924	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1925	SSF102816	Putative dsDNA mimic
YPD4_1926	SSF56024	Phospholipase D/nuclease
YPD4_1927	SSF56925	OMPA-like
YPD4_1928	SSF74653	TolA/TonB C-terminal domain
YPD4_1930	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_1933	SSF52091	SpoIIaa-like
YPD4_1935	SSF56925	OMPA-like
YPD4_1937	SSF51366	Ribulose-phoshate binding barrel
YPD4_1938	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_1939	SSF51366	Ribulose-phoshate binding barrel
YPD4_1940	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YPD4_1940	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YPD4_1941	SSF52317	Class I glutamine amidotransferase-like
YPD4_1942	SSF56322	ADC synthase
YPD4_1943	SSF89550	PHP domain-like
YPD4_1944	SSF55821	YrdC/RibB
YPD4_1945	SSF55120	Pseudouridine synthase
YPD4_1945	SSF55174	Alpha-L RNA-binding motif
YPD4_1946	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1947	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1948	SSF52096	ClpP/crotonase
YPD4_1949	SSF56712	Prokaryotic type I DNA topoisomerase
YPD4_1949	SSF57783	Zinc beta-ribbon
YPD4_1950	SSF46785	"Winged helix" DNA-binding domain
YPD4_1950	SSF53850	Periplasmic binding protein-like II
YPD4_1952	SSF52016	LeuD/IlvD-like
YPD4_1952	SSF53732	Aconitase iron-sulfur domain
YPD4_1953	SSF142695	RibA-like
YPD4_1954	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPD4_1956	SSF48452	TPR-like
YPD4_1957	SSF51366	Ribulose-phoshate binding barrel
YPD4_1958	SSF55159	eIF1-like
YPD4_1959	SSF53639	AraD/HMP-PK domain-like
YPD4_1960	SSF51569	Aldolase
YPD4_1963	SSF50249	Nucleic acid-binding proteins
YPD4_1964	SSF103473	MFS general substrate transporter
YPD4_1965	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1966	SSF48150	DNA-glycosylase
YPD4_1970	SSF46689	Homeodomain-like
YPD4_1970	SSF55136	Probable bacterial effector-binding domain
YPD4_1971	SSF142019	Nqo1 FMN-binding domain-like
YPD4_1971	SSF46548	alpha-helical ferredoxin
YPD4_1972	SSF54862	4Fe-4S ferredoxins
YPD4_1975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1975	SSF90123	ABC transporter transmembrane region
YPD4_1976	SSF111369	HlyD-like secretion proteins
YPD4_1978	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1978	SSF90123	ABC transporter transmembrane region
YPD4_1979	SSF50443	FucI/AraA C-terminal domain-like
YPD4_1979	SSF53743	FucI/AraA N-terminal and middle domains
YPD4_1980	SSF53067	Actin-like ATPase domain
YPD4_1981	SSF53822	Periplasmic binding protein-like I
YPD4_1982	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1984	SSF46689	Homeodomain-like
YPD4_1984	SSF51215	Regulatory protein AraC
YPD4_1985	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_1989	SSF51182	RmlC-like cupins
YPD4_1990	SSF48557	L-aspartase-like
YPD4_1991	SSF56596	Replication terminator protein (Tus)
YPD4_1992	SSF103473	MFS general substrate transporter
YPD4_1993	SSF46785	"Winged helix" DNA-binding domain
YPD4_1993	SSF53850	Periplasmic binding protein-like II
YPD4_1994	SSF46785	"Winged helix" DNA-binding domain
YPD4_1994	SSF53067	Actin-like ATPase domain
YPD4_1995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_1996	SSF81340	Clc chloride channel
YPD4_1997	SSF47413	lambda repressor-like DNA-binding domains
YPD4_1997	SSF53822	Periplasmic binding protein-like I
YPD4_1999	SSF53822	Periplasmic binding protein-like I
YPD4_2000	SSF53850	Periplasmic binding protein-like II
YPD4_2001	SSF161098	MetI-like
YPD4_2002	SSF53167	Purine and uridine phosphorylases
YPD4_2006	SSF54001	Cysteine proteinases
YPD4_2007	SSF52467	DHS-like NAD/FAD-binding domain
YPD4_2007	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_2008	SSF55021	ACT-like
YPD4_2009	SSF56784	HAD-like
YPD4_2010	SSF158682	TerB-like
YPD4_2012	SSF53649	Alkaline phosphatase-like
YPD4_2013	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YPD4_2013	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
YPD4_2014	SSF46785	"Winged helix" DNA-binding domain
YPD4_2014	SSF51206	cAMP-binding domain-like
YPD4_2015	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2016	SSF52467	DHS-like NAD/FAD-binding domain
YPD4_2017	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2017	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPD4_2018	SSF159871	YdgH-like
YPD4_2021	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2021	SSF52172	CheY-like
YPD4_2022	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2022	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2023	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPD4_2024	SSF143422	Transposase IS200-like
YPD4_2025	SSF81298	Adenylylcyclase toxin (the edema factor)
YPD4_2026	SSF81298	Adenylylcyclase toxin (the edema factor)
YPD4_2027	SSF101874	YceI-like
YPD4_2028	SSF81342	Transmembrane di-heme cytochromes
YPD4_2029	SSF50494	Trypsin-like serine proteases
YPD4_2030	SSF47413	lambda repressor-like DNA-binding domains
YPD4_2032	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2033	SSF52218	Flavoproteins
YPD4_2034	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_2035	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_2035	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2038	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2038	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPD4_2042	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_2043	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_2043	SSF52922	TK C-terminal domain-like
YPD4_2043	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
YPD4_2043	SSF54862	4Fe-4S ferredoxins
YPD4_2044	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2045	SSF53474	alpha/beta-Hydrolases
YPD4_2046	SSF46955	Putative DNA-binding domain
YPD4_2047	SSF143865	CorA soluble domain-like
YPD4_2047	SSF144083	Magnesium transport protein CorA, transmembrane region
YPD4_2048	SSF53850	Periplasmic binding protein-like II
YPD4_2049	SSF53187	Zn-dependent exopeptidases
YPD4_2050	SSF51604	Enolase C-terminal domain-like
YPD4_2050	SSF54826	Enolase N-terminal domain-like
YPD4_2051	SSF46689	Homeodomain-like
YPD4_2051	SSF53098	Ribonuclease H-like
YPD4_2052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2053	SSF52151	FabD/lysophospholipase-like
YPD4_2054	SSF50621	Alanine racemase C-terminal domain-like
YPD4_2054	SSF51419	PLP-binding barrel
YPD4_2056	SSF101967	Adhesin YadA, collagen-binding domain
YPD4_2056	SSF54523	Pili subunits
YPD4_2057	SSF101967	Adhesin YadA, collagen-binding domain
YPD4_2058	SSF47090	PGBD-like
YPD4_2058	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YPD4_2059	SSF75708	Chemotaxis phosphatase CheZ
YPD4_2060	SSF52172	CheY-like
YPD4_2061	SSF52172	CheY-like
YPD4_2061	SSF52738	Methylesterase CheB, C-terminal domain
YPD4_2062	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
YPD4_2062	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2063	SSF47170	Aspartate receptor, ligand-binding domain
YPD4_2063	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_2064	SSF47170	Aspartate receptor, ligand-binding domain
YPD4_2064	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_2067	SSF103515	Autotransporter
YPD4_2067	SSF51126	Pectin lyase-like
YPD4_2069	SSF51658	Xylose isomerase-like
YPD4_2070	SSF55298	YjgF-like
YPD4_2071	SSF103473	MFS general substrate transporter
YPD4_2072	SSF50341	CheW-like
YPD4_2073	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPD4_2073	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2073	SSF50341	CheW-like
YPD4_2073	SSF55052	CheY-binding domain of CheA
YPD4_2073	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2075	SSF103088	OmpA-like
YPD4_2077	SSF160930	FlhC-like
YPD4_2078	SSF56784	HAD-like
YPD4_2078	SSF81653	Calcium ATPase, transduction domain A
YPD4_2078	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
YPD4_2078	SSF81665	Calcium ATPase, transmembrane domain M
YPD4_2080	SSF47170	Aspartate receptor, ligand-binding domain
YPD4_2080	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_2081	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_2082	SSF49303	beta-Galactosidase/glucuronidase domain
YPD4_2082	SSF49785	Galactose-binding domain-like
YPD4_2082	SSF51445	(Trans)glycosidases
YPD4_2082	SSF74650	Galactose mutarotase-like
YPD4_2083	SSF50129	GroES-like
YPD4_2083	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2085	SSF46785	"Winged helix" DNA-binding domain
YPD4_2085	SSF54909	Dimeric alpha+beta barrel
YPD4_2087	SSF53254	Phosphoglycerate mutase-like
YPD4_2088	SSF46785	"Winged helix" DNA-binding domain
YPD4_2089	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2090	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_2090	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_2091	SSF47413	lambda repressor-like DNA-binding domains
YPD4_2091	SSF53822	Periplasmic binding protein-like I
YPD4_2092	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPD4_2093	SSF55120	Pseudouridine synthase
YPD4_2094	SSF55811	Nudix
YPD4_2095	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2096	SSF101322	YcfC-like
YPD4_2097	SSF48557	L-aspartase-like
YPD4_2098	SSF56925	OMPA-like
YPD4_2099	SSF52172	CheY-like
YPD4_2100	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2100	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2101	SSF51197	Clavaminate synthase-like
YPD4_2102	SSF53187	Zn-dependent exopeptidases
YPD4_2102	SSF55031	Bacterial exopeptidase dimerisation domain
YPD4_2103	SSF52467	DHS-like NAD/FAD-binding domain
YPD4_2104	SSF53067	Actin-like ATPase domain
YPD4_2106	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2108	SSF141259	CarD-like
YPD4_2108	SSF143517	TRCF domain-like
YPD4_2108	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2113	SSF51905	FAD/NAD(P)-binding domain
YPD4_2114	SSF53474	alpha/beta-Hydrolases
YPD4_2115	SSF51445	(Trans)glycosidases
YPD4_2116	SSF56112	Protein kinase-like (PK-like)
YPD4_2119	SSF54197	HIT-like
YPD4_2120	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2120	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPD4_2121	SSF143422	Transposase IS200-like
YPD4_2122	SSF55604	Glucose permease domain IIB
YPD4_2123	SSF51556	Metallo-dependent hydrolases
YPD4_2124	SSF48019	post-AAA+ oligomerization domain-like
YPD4_2124	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2127	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
YPD4_2128	SSF143422	Transposase IS200-like
YPD4_2129	SSF53901	Thiolase-like
YPD4_2130	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2131	SSF52151	FabD/lysophospholipase-like
YPD4_2131	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YPD4_2132	SSF53901	Thiolase-like
YPD4_2133	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPD4_2135	SSF52972	ITPase-like
YPD4_2136	SSF143422	Transposase IS200-like
YPD4_2137	SSF55120	Pseudouridine synthase
YPD4_2137	SSF55174	Alpha-L RNA-binding motif
YPD4_2138	SSF50249	Nucleic acid-binding proteins
YPD4_2140	SSF51556	Metallo-dependent hydrolases
YPD4_2142	SSF51905	FAD/NAD(P)-binding domain
YPD4_2142	SSF54373	FAD-linked reductases, C-terminal domain
YPD4_2143	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2145	SSF52821	Rhodanese/Cell cycle control phosphatase
YPD4_2146	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_2147	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_2148	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2148	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
YPD4_2149	SSF46785	"Winged helix" DNA-binding domain
YPD4_2149	SSF53850	Periplasmic binding protein-like II
YPD4_2150	SSF103473	MFS general substrate transporter
YPD4_2151	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_2152	SSF51430	NAD(P)-linked oxidoreductase
YPD4_2157	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2159	SSF50182	Sm-like ribonucleoproteins
YPD4_2161	SSF56925	OMPA-like
YPD4_2162	SSF75005	Arabinanase/levansucrase/invertase
YPD4_2163	SSF75005	Arabinanase/levansucrase/invertase
YPD4_2164	SSF161098	MetI-like
YPD4_2165	SSF161098	MetI-like
YPD4_2166	SSF53850	Periplasmic binding protein-like II
YPD4_2167	SSF47413	lambda repressor-like DNA-binding domains
YPD4_2167	SSF53822	Periplasmic binding protein-like I
YPD4_2168	SSF53738	Phosphoglucomutase, first 3 domains
YPD4_2168	SSF55957	Phosphoglucomutase, C-terminal domain
YPD4_2169	SSF50331	MOP-like
YPD4_2169	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2176	SSF51126	Pectin lyase-like
YPD4_2178	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_2178	SSF54292	2Fe-2S ferredoxin-like
YPD4_2178	SSF63380	Riboflavin synthase domain-like
YPD4_2179	SSF50022	ISP domain
YPD4_2179	SSF55961	Bet v1-like
YPD4_2181	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPD4_2182	SSF46785	"Winged helix" DNA-binding domain
YPD4_2182	SSF53850	Periplasmic binding protein-like II
YPD4_2183	SSF47413	lambda repressor-like DNA-binding domains
YPD4_2183	SSF53822	Periplasmic binding protein-like I
YPD4_2185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2186	SSF53822	Periplasmic binding protein-like I
YPD4_2187	SSF50129	GroES-like
YPD4_2187	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2190	SSF161111	Cation efflux protein transmembrane domain-like
YPD4_2191	SSF56925	OMPA-like
YPD4_2192	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_2193	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_2194	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2195	SSF47240	Ferritin-like
YPD4_2196	SSF48452	TPR-like
YPD4_2197	SSF53850	Periplasmic binding protein-like II
YPD4_2198	SSF161098	MetI-like
YPD4_2199	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2200	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_2200	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_2201	SSF46689	Homeodomain-like
YPD4_2201	SSF53098	Ribonuclease H-like
YPD4_2202	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2205	SSF52799	(Phosphotyrosine protein) phosphatases II
YPD4_2206	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2206	SSF53474	alpha/beta-Hydrolases
YPD4_2207	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPD4_2211	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2211	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPD4_2212	SSF143422	Transposase IS200-like
YPD4_2213	SSF53271	PRTase-like
YPD4_2214	SSF55326	PurM N-terminal domain-like
YPD4_2214	SSF56042	PurM C-terminal domain-like
YPD4_2215	SSF53328	Formyltransferase
YPD4_2216	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_2219	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2220	SSF161098	MetI-like
YPD4_2221	SSF161098	MetI-like
YPD4_2221	SSF82171	DPP6 N-terminal domain-like
YPD4_2222	SSF140356	PPK N-terminal domain-like
YPD4_2222	SSF143724	PHP14-like
YPD4_2222	SSF56024	Phospholipase D/nuclease
YPD4_2223	SSF109604	HD-domain/PDEase-like
YPD4_2223	SSF53067	Actin-like ATPase domain
YPD4_2224	SSF158791	MgtE N-terminal domain-like
YPD4_2224	SSF161093	MgtE membrane domain-like
YPD4_2224	SSF54631	CBS-domain pair
YPD4_2225	SSF53067	Actin-like ATPase domain
YPD4_2226	SSF161098	MetI-like
YPD4_2227	SSF161098	MetI-like
YPD4_2228	SSF161098	MetI-like
YPD4_2229	SSF53850	Periplasmic binding protein-like II
YPD4_2230	SSF53383	PLP-dependent transferases
YPD4_2231	SSF46785	"Winged helix" DNA-binding domain
YPD4_2231	SSF53383	PLP-dependent transferases
YPD4_2232	SSF50331	MOP-like
YPD4_2232	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2233	SSF111369	HlyD-like secretion proteins
YPD4_2234	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_2234	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPD4_2234	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_2235	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_2235	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPD4_2235	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_2236	SSF103473	MFS general substrate transporter
YPD4_2237	SSF158472	HAMP domain-like
YPD4_2237	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2237	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2238	SSF52172	CheY-like
YPD4_2239	SSF160113	YegP-like
YPD4_2241	SSF111331	NAD kinase/diacylglycerol kinase-like
YPD4_2242	SSF89872	Inhibitor of vertebrate lysozyme, Ivy
YPD4_2244	SSF53613	Ribokinase-like
YPD4_2250	SSF141452	Hcp1-like
YPD4_2251	SSF143422	Transposase IS200-like
YPD4_2252	SSF52317	Class I glutamine amidotransferase-like
YPD4_2252	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2252	SSF54810	GMP synthetase C-terminal dimerisation domain
YPD4_2253	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YPD4_2253	SSF54631	CBS-domain pair
YPD4_2256	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2257	SSF50998	Quinoprotein alcohol dehydrogenase-like
YPD4_2258	SSF48452	TPR-like
YPD4_2259	SSF52954	Class II aaRS ABD-related
YPD4_2259	SSF55681	Class II aaRS and biotin synthetases
YPD4_2260	SSF51604	Enolase C-terminal domain-like
YPD4_2260	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YPD4_2261	SSF47413	lambda repressor-like DNA-binding domains
YPD4_2262	SSF48452	TPR-like
YPD4_2263	SSF102114	Radical SAM enzymes
YPD4_2264	SSF54919	Nucleoside diphosphate kinase, NDK
YPD4_2265	SSF49695	gamma-Crystallin-like
YPD4_2266	SSF103515	Autotransporter
YPD4_2266	SSF51126	Pectin lyase-like
YPD4_2267	SSF103515	Autotransporter
YPD4_2267	SSF51126	Pectin lyase-like
YPD4_2268	SSF103515	Autotransporter
YPD4_2270	SSF53187	Zn-dependent exopeptidases
YPD4_2271	SSF54292	2Fe-2S ferredoxin-like
YPD4_2272	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YPD4_2272	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YPD4_2272	SSF53067	Actin-like ATPase domain
YPD4_2273	SSF46565	Chaperone J-domain
YPD4_2273	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
YPD4_2274	SSF89360	HesB-like domain
YPD4_2275	SSF82649	SufE/NifU
YPD4_2276	SSF53383	PLP-dependent transferases
YPD4_2277	SSF53383	PLP-dependent transferases
YPD4_2278	SSF46785	"Winged helix" DNA-binding domain
YPD4_2279	SSF75217	alpha/beta knot
YPD4_2280	SSF56655	Carbohydrate phosphatase
YPD4_2281	SSF143422	Transposase IS200-like
YPD4_2284	SSF63520	PTS-regulatory domain, PRD
YPD4_2285	SSF103473	MFS general substrate transporter
YPD4_2286	SSF103473	MFS general substrate transporter
YPD4_2287	SSF56925	OMPA-like
YPD4_2288	SSF53383	PLP-dependent transferases
YPD4_2289	SSF46458	Globin-like
YPD4_2289	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_2289	SSF63380	Riboflavin synthase domain-like
YPD4_2290	SSF46785	"Winged helix" DNA-binding domain
YPD4_2290	SSF53850	Periplasmic binding protein-like II
YPD4_2291	SSF53850	Periplasmic binding protein-like II
YPD4_2292	SSF54913	GlnB-like
YPD4_2293	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2293	SSF56317	Carbon-nitrogen hydrolase
YPD4_2294	SSF46689	Homeodomain-like
YPD4_2294	SSF52172	CheY-like
YPD4_2294	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2296	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2296	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2297	SSF143422	Transposase IS200-like
YPD4_2300	SSF109736	FGAM synthase PurL, linker domain
YPD4_2300	SSF52317	Class I glutamine amidotransferase-like
YPD4_2300	SSF55326	PurM N-terminal domain-like
YPD4_2300	SSF56042	PurM C-terminal domain-like
YPD4_2300	SSF82697	PurS-like
YPD4_2301	SSF53850	Periplasmic binding protein-like II
YPD4_2301	SSF53955	Lysozyme-like
YPD4_2302	SSF53927	Cytidine deaminase-like
YPD4_2303	SSF56784	HAD-like
YPD4_2304	SSF46934	UBA-like
YPD4_2304	SSF53697	SIS domain
YPD4_2305	SSF46689	Homeodomain-like
YPD4_2305	SSF53697	SIS domain
YPD4_2306	SSF143422	Transposase IS200-like
YPD4_2307	SSF56214	4'-phosphopantetheinyl transferase
YPD4_2308	SSF63892	Pyridoxine 5'-phosphate synthase
YPD4_2309	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2310	SSF46689	Homeodomain-like
YPD4_2310	SSF53098	Ribonuclease H-like
YPD4_2311	SSF50249	Nucleic acid-binding proteins
YPD4_2311	SSF57863	ArfGap/RecO-like zinc finger
YPD4_2312	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2312	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YPD4_2313	SSF54768	dsRNA-binding domain-like
YPD4_2313	SSF69065	RNase III domain-like
YPD4_2314	SSF51306	LexA/Signal peptidase
YPD4_2315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2315	SSF54980	EF-G C-terminal domain-like
YPD4_2319	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
YPD4_2320	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPD4_2320	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPD4_2321	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YPD4_2321	SSF51905	FAD/NAD(P)-binding domain
YPD4_2321	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YPD4_2322	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2324	SSF48403	Ankyrin repeat
YPD4_2325	SSF53474	alpha/beta-Hydrolases
YPD4_2326	SSF51998	PFL-like glycyl radical enzymes
YPD4_2327	SSF52141	Uracil-DNA glycosylase-like
YPD4_2328	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
YPD4_2331	SSF88713	Glycoside hydrolase/deacetylase
YPD4_2332	SSF50891	Cyclophilin-like
YPD4_2333	SSF160467	PH0987 N-terminal domain-like
YPD4_2333	SSF50891	Cyclophilin-like
YPD4_2334	SSF102705	NIF3 (NGG1p interacting factor 3)-like
YPD4_2335	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_2336	SSF48173	Cryptochrome/photolyase FAD-binding domain
YPD4_2336	SSF52425	Cryptochrome/photolyase, N-terminal domain
YPD4_2339	SSF56784	HAD-like
YPD4_2339	SSF81653	Calcium ATPase, transduction domain A
YPD4_2339	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
YPD4_2339	SSF81665	Calcium ATPase, transmembrane domain M
YPD4_2341	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2341	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2341	SSF55781	GAF domain-like
YPD4_2341	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2342	SSF52172	CheY-like
YPD4_2343	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_2344	SSF53738	Phosphoglucomutase, first 3 domains
YPD4_2344	SSF55957	Phosphoglucomutase, C-terminal domain
YPD4_2345	SSF47598	Ribbon-helix-helix
YPD4_2345	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
YPD4_2346	SSF88713	Glycoside hydrolase/deacetylase
YPD4_2347	SSF46689	Homeodomain-like
YPD4_2347	SSF51182	RmlC-like cupins
YPD4_2348	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
YPD4_2350	SSF52794	PTS system IIB component-like
YPD4_2353	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2353	SSF81324	Voltage-gated potassium channels
YPD4_2354	SSF47752	Protein HNS-dependent expression A; HdeA
YPD4_2358	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2360	SSF69287	Urease metallochaperone UreE, N-terminal domain
YPD4_2361	SSF51338	Composite domain of metallo-dependent hydrolases
YPD4_2361	SSF51556	Metallo-dependent hydrolases
YPD4_2362	SSF51278	Urease, beta-subunit
YPD4_2363	SSF54111	Urease, gamma-subunit
YPD4_2364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2366	SSF161098	MetI-like
YPD4_2367	SSF161098	MetI-like
YPD4_2368	SSF53850	Periplasmic binding protein-like II
YPD4_2371	SSF159894	YgaC/TfoX-N like
YPD4_2373	SSF52218	Flavoproteins
YPD4_2374	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YPD4_2375	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YPD4_2375	SSF51998	PFL-like glycyl radical enzymes
YPD4_2376	SSF47240	Ferritin-like
YPD4_2377	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2377	SSF54631	CBS-domain pair
YPD4_2378	SSF161098	MetI-like
YPD4_2379	SSF53850	Periplasmic binding protein-like II
YPD4_2380	SSF88713	Glycoside hydrolase/deacetylase
YPD4_2381	SSF46689	Homeodomain-like
YPD4_2381	SSF53098	Ribonuclease H-like
YPD4_2382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2384	SSF53474	alpha/beta-Hydrolases
YPD4_2385	SSF52218	Flavoproteins
YPD4_2386	SSF46785	"Winged helix" DNA-binding domain
YPD4_2387	SSF51445	(Trans)glycosidases
YPD4_2387	SSF55545	beta-N-acetylhexosaminidase-like domain
YPD4_2387	SSF81296	E set domains
YPD4_2388	SSF49384	Carbohydrate-binding domain
YPD4_2390	SSF50715	Ribosomal protein L25-like
YPD4_2390	SSF52374	Nucleotidylyl transferase
YPD4_2391	SSF143422	Transposase IS200-like
YPD4_2392	SSF51261	Duplicated hybrid motif
YPD4_2392	SSF55604	Glucose permease domain IIB
YPD4_2394	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_2395	SSF51338	Composite domain of metallo-dependent hydrolases
YPD4_2395	SSF51556	Metallo-dependent hydrolases
YPD4_2396	SSF46785	"Winged helix" DNA-binding domain
YPD4_2396	SSF53067	Actin-like ATPase domain
YPD4_2397	SSF56784	HAD-like
YPD4_2398	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2398	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPD4_2399	SSF51905	FAD/NAD(P)-binding domain
YPD4_2400	SSF102114	Radical SAM enzymes
YPD4_2401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2402	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPD4_2403	SSF54631	CBS-domain pair
YPD4_2403	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_2404	SSF56317	Carbon-nitrogen hydrolase
YPD4_2405	SSF53850	Periplasmic binding protein-like II
YPD4_2406	SSF161098	MetI-like
YPD4_2407	SSF161098	MetI-like
YPD4_2408	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2410	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPD4_2410	SSF50677	ValRS/IleRS/LeuRS editing domain
YPD4_2410	SSF52374	Nucleotidylyl transferase
YPD4_2412	SSF48019	post-AAA+ oligomerization domain-like
YPD4_2412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2413	SSF52374	Nucleotidylyl transferase
YPD4_2414	SSF81301	Nucleotidyltransferase
YPD4_2415	SSF75217	alpha/beta knot
YPD4_2416	SSF56519	Penicillin binding protein dimerisation domain
YPD4_2416	SSF56601	beta-lactamase/transpeptidase-like
YPD4_2418	SSF50685	Barwin-like endoglucanases
YPD4_2419	SSF110997	Sporulation related repeat
YPD4_2420	SSF56601	beta-lactamase/transpeptidase-like
YPD4_2420	SSF69189	Penicillin-binding protein associated domain
YPD4_2421	SSF55681	Class II aaRS and biotin synthetases
YPD4_2422	SSF102114	Radical SAM enzymes
YPD4_2424	SSF50249	Nucleic acid-binding proteins
YPD4_2425	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2427	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2427	SSF90123	ABC transporter transmembrane region
YPD4_2429	SSF51182	RmlC-like cupins
YPD4_2430	SSF51658	Xylose isomerase-like
YPD4_2431	SSF53613	Ribokinase-like
YPD4_2432	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2432	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_2434	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2435	SSF53822	Periplasmic binding protein-like I
YPD4_2436	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_2437	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2438	SSF52467	DHS-like NAD/FAD-binding domain
YPD4_2438	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_2439	SSF53720	ALDH-like
YPD4_2440	SSF46689	Homeodomain-like
YPD4_2440	SSF53697	SIS domain
YPD4_2442	SSF48239	Terpenoid cyclases/Protein prenyltransferases
YPD4_2443	SSF53955	Lysozyme-like
YPD4_2445	SSF55804	Phoshotransferase/anion transport protein
YPD4_2446	SSF47413	lambda repressor-like DNA-binding domains
YPD4_2446	SSF53822	Periplasmic binding protein-like I
YPD4_2447	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2447	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPD4_2447	SSF75138	HprK N-terminal domain-like
YPD4_2448	SSF53067	Actin-like ATPase domain
YPD4_2450	SSF116960	YfbU-like
YPD4_2451	SSF56784	HAD-like
YPD4_2452	SSF116726	TrkA C-terminal domain-like
YPD4_2453	SSF109604	HD-domain/PDEase-like
YPD4_2454	SSF53383	PLP-dependent transferases
YPD4_2455	SSF46785	"Winged helix" DNA-binding domain
YPD4_2455	SSF53850	Periplasmic binding protein-like II
YPD4_2457	SSF56770	HydA/Nqo6-like
YPD4_2458	SSF143243	Nqo5-like
YPD4_2458	SSF56762	HydB/Nqo4-like
YPD4_2459	SSF52833	Thioredoxin-like
YPD4_2460	SSF140490	Nqo1C-terminal domain-like
YPD4_2460	SSF142019	Nqo1 FMN-binding domain-like
YPD4_2460	SSF142984	Nqo1 middle domain-like
YPD4_2461	SSF50692	ADC-like
YPD4_2461	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_2461	SSF54292	2Fe-2S ferredoxin-like
YPD4_2461	SSF54862	4Fe-4S ferredoxins
YPD4_2463	SSF54862	4Fe-4S ferredoxins
YPD4_2470	SSF51197	Clavaminate synthase-like
YPD4_2471	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2472	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2473	SSF51445	(Trans)glycosidases
YPD4_2474	SSF47413	lambda repressor-like DNA-binding domains
YPD4_2474	SSF53822	Periplasmic binding protein-like I
YPD4_2475	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2475	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPD4_2476	SSF103473	MFS general substrate transporter
YPD4_2477	SSF143744	GlcG-like
YPD4_2478	SSF143975	IlvD/EDD N-terminal domain-like
YPD4_2478	SSF52016	LeuD/IlvD-like
YPD4_2481	SSF56322	ADC synthase
YPD4_2482	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_2483	SSF53474	alpha/beta-Hydrolases
YPD4_2484	SSF52096	ClpP/crotonase
YPD4_2485	SSF51604	Enolase C-terminal domain-like
YPD4_2485	SSF54826	Enolase N-terminal domain-like
YPD4_2486	SSF56801	Acetyl-CoA synthetase-like
YPD4_2487	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YPD4_2487	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YPD4_2488	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2489	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2490	SSF46689	Homeodomain-like
YPD4_2490	SSF53098	Ribonuclease H-like
YPD4_2491	SSF46785	"Winged helix" DNA-binding domain
YPD4_2491	SSF53850	Periplasmic binding protein-like II
YPD4_2492	SSF51430	NAD(P)-linked oxidoreductase
YPD4_2493	SSF51430	NAD(P)-linked oxidoreductase
YPD4_2495	SSF51445	(Trans)glycosidases
YPD4_2495	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
YPD4_2501	SSF103515	Autotransporter
YPD4_2501	SSF51126	Pectin lyase-like
YPD4_2502	SSF141452	Hcp1-like
YPD4_2506	SSF56601	beta-lactamase/transpeptidase-like
YPD4_2509	SSF55811	Nudix
YPD4_2510	SSF56300	Metallo-dependent phosphatases
YPD4_2511	SSF141868	EAL domain-like
YPD4_2512	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2514	SSF161098	MetI-like
YPD4_2515	SSF161098	MetI-like
YPD4_2516	SSF53850	Periplasmic binding protein-like II
YPD4_2517	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YPD4_2518	SSF53271	PRTase-like
YPD4_2518	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPD4_2520	SSF110997	Sporulation related repeat
YPD4_2521	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPD4_2521	SSF53623	MurD-like peptide ligases, catalytic domain
YPD4_2522	SSF52096	ClpP/crotonase
YPD4_2524	SSF55120	Pseudouridine synthase
YPD4_2525	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2525	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_2526	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2526	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPD4_2527	SSF46689	Homeodomain-like
YPD4_2527	SSF51182	RmlC-like cupins
YPD4_2528	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_2530	SSF49401	Bacterial adhesins
YPD4_2531	SSF53681	Aspartate/glutamate racemase
YPD4_2532	SSF53901	Thiolase-like
YPD4_2533	SSF53901	Thiolase-like
YPD4_2534	SSF51905	FAD/NAD(P)-binding domain
YPD4_2534	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2537	SSF55166	Hedgehog/DD-peptidase
YPD4_2538	SSF103263	Chorismate synthase, AroC
YPD4_2539	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2540	SSF160443	SMR domain-like
YPD4_2541	SSF53254	Phosphoglycerate mutase-like
YPD4_2542	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_2542	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2542	SSF52096	ClpP/crotonase
YPD4_2543	SSF53901	Thiolase-like
YPD4_2544	SSF56935	Porins
YPD4_2546	SSF48452	TPR-like
YPD4_2548	SSF52833	Thioredoxin-like
YPD4_2550	SSF82093	Heme chaperone CcmE
YPD4_2554	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2556	SSF140478	LemA-like
YPD4_2558	SSF57783	Zinc beta-ribbon
YPD4_2558	SSF82057	Prokaryotic SH3-related domain
YPD4_2560	SSF160719	gpW/gp25-like
YPD4_2561	SSF144059	ImpE-like
YPD4_2563	SSF69255	gp5 N-terminal domain-like
YPD4_2563	SSF69279	Phage tail proteins
YPD4_2563	SSF69349	Phage fibre proteins
YPD4_2564	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2565	SSF103088	OmpA-like
YPD4_2566	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2567	SSF46689	Homeodomain-like
YPD4_2567	SSF53098	Ribonuclease H-like
YPD4_2571	SSF141452	Hcp1-like
YPD4_2574	SSF49401	Bacterial adhesins
YPD4_2577	SSF141729	FimD N-terminal domain-like
YPD4_2578	SSF49354	PapD-like
YPD4_2578	SSF49584	Periplasmic chaperone C-domain
YPD4_2579	SSF49401	Bacterial adhesins
YPD4_2580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2580	SSF81923	Double Clp-N motif
YPD4_2584	SSF49401	Bacterial adhesins
YPD4_2585	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_2587	SSF103088	OmpA-like
YPD4_2588	SSF55724	Mog1p/PsbP-like
YPD4_2589	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2590	SSF53955	Lysozyme-like
YPD4_2591	SSF53850	Periplasmic binding protein-like II
YPD4_2592	SSF161098	MetI-like
YPD4_2593	SSF50331	MOP-like
YPD4_2593	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2596	SSF50692	ADC-like
YPD4_2596	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_2597	SSF54862	4Fe-4S ferredoxins
YPD4_2599	SSF89155	TorD-like
YPD4_2600	SSF54862	4Fe-4S ferredoxins
YPD4_2603	SSF52964	TolB, N-terminal domain
YPD4_2605	SSF81342	Transmembrane di-heme cytochromes
YPD4_2606	SSF53383	PLP-dependent transferases
YPD4_2607	SSF51197	Clavaminate synthase-like
YPD4_2608	SSF53067	Actin-like ATPase domain
YPD4_2610	SSF46785	"Winged helix" DNA-binding domain
YPD4_2610	SSF53850	Periplasmic binding protein-like II
YPD4_2611	SSF51430	NAD(P)-linked oxidoreductase
YPD4_2615	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
YPD4_2615	SSF52374	Nucleotidylyl transferase
YPD4_2616	SSF143422	Transposase IS200-like
YPD4_2619	SSF47781	RuvA domain 2-like
YPD4_2619	SSF50249	Nucleic acid-binding proteins
YPD4_2619	SSF52113	BRCT domain
YPD4_2619	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YPD4_2620	SSF64383	Cell-division protein ZipA, C-terminal domain
YPD4_2622	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_2623	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YPD4_2623	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_2623	SSF52009	Phosphohistidine domain
YPD4_2624	SSF51261	Duplicated hybrid motif
YPD4_2625	SSF143422	Transposase IS200-like
YPD4_2626	SSF158472	HAMP domain-like
YPD4_2626	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2626	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2627	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2627	SSF52172	CheY-like
YPD4_2628	SSF111369	HlyD-like secretion proteins
YPD4_2629	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2630	SSF51905	FAD/NAD(P)-binding domain
YPD4_2630	SSF52821	Rhodanese/Cell cycle control phosphatase
YPD4_2630	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPD4_2632	SSF53092	Creatinase/prolidase N-terminal domain
YPD4_2632	SSF55920	Creatinase/aminopeptidase
YPD4_2633	SSF53383	PLP-dependent transferases
YPD4_2634	SSF53300	vWA-like
YPD4_2635	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2635	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2636	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2636	SSF52172	CheY-like
YPD4_2637	SSF52058	L domain-like
YPD4_2638	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_2639	SSF50331	MOP-like
YPD4_2639	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2640	SSF161098	MetI-like
YPD4_2641	SSF161098	MetI-like
YPD4_2642	SSF53850	Periplasmic binding protein-like II
YPD4_2643	SSF103473	MFS general substrate transporter
YPD4_2644	SSF46689	Homeodomain-like
YPD4_2644	SSF53697	SIS domain
YPD4_2645	SSF51197	Clavaminate synthase-like
YPD4_2646	SSF53067	Actin-like ATPase domain
YPD4_2647	SSF52058	L domain-like
YPD4_2648	SSF52058	L domain-like
YPD4_2649	SSF51366	Ribulose-phoshate binding barrel
YPD4_2650	SSF51569	Aldolase
YPD4_2651	SSF54909	Dimeric alpha+beta barrel
YPD4_2653	SSF101756	Hypothetical protein YgiW
YPD4_2654	SSF103515	Autotransporter
YPD4_2654	SSF51126	Pectin lyase-like
YPD4_2656	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_2657	SSF102886	Coproporphyrinogen III oxidase
YPD4_2659	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2659	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPD4_2659	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPD4_2660	SSF55811	Nudix
YPD4_2661	SSF48695	Multiheme cytochromes
YPD4_2662	SSF48695	Multiheme cytochromes
YPD4_2663	SSF50692	ADC-like
YPD4_2663	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_2664	SSF54862	4Fe-4S ferredoxins
YPD4_2665	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2665	SSF52172	CheY-like
YPD4_2666	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_2666	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPD4_2666	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_2669	SSF102114	Radical SAM enzymes
YPD4_2670	SSF53649	Alkaline phosphatase-like
YPD4_2671	SSF50331	MOP-like
YPD4_2671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2672	SSF161098	MetI-like
YPD4_2673	SSF53850	Periplasmic binding protein-like II
YPD4_2674	SSF48452	TPR-like
YPD4_2675	SSF52833	Thioredoxin-like
YPD4_2676	SSF53187	Zn-dependent exopeptidases
YPD4_2676	SSF55031	Bacterial exopeptidase dimerisation domain
YPD4_2677	SSF55166	Hedgehog/DD-peptidase
YPD4_2678	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_2679	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2682	SSF56104	SAICAR synthase-like
YPD4_2683	SSF143422	Transposase IS200-like
YPD4_2685	SSF51569	Aldolase
YPD4_2686	SSF55021	ACT-like
YPD4_2687	SSF52833	Thioredoxin-like
YPD4_2690	SSF48452	TPR-like
YPD4_2691	SSF52833	Thioredoxin-like
YPD4_2692	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2693	SSF143422	Transposase IS200-like
YPD4_2694	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPD4_2694	SSF52374	Nucleotidylyl transferase
YPD4_2695	SSF50891	Cyclophilin-like
YPD4_2696	SSF56300	Metallo-dependent phosphatases
YPD4_2697	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
YPD4_2698	SSF51246	Rudiment single hybrid motif
YPD4_2698	SSF52440	PreATP-grasp domain
YPD4_2698	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_2701	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2702	SSF52266	SGNH hydrolase
YPD4_2703	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2704	SSF48452	TPR-like
YPD4_2704	SSF52833	Thioredoxin-like
YPD4_2705	SSF117892	Band 7/SPFH domain
YPD4_2706	SSF141322	NfeD domain-like
YPD4_2707	SSF46955	Putative DNA-binding domain
YPD4_2708	SSF55008	HMA, heavy metal-associated domain
YPD4_2708	SSF56784	HAD-like
YPD4_2708	SSF81653	Calcium ATPase, transduction domain A
YPD4_2708	SSF81665	Calcium ATPase, transmembrane domain M
YPD4_2710	SSF55826	YbaK/ProRS associated domain
YPD4_2711	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YPD4_2712	SSF56300	Metallo-dependent phosphatases
YPD4_2713	SSF103473	MFS general substrate transporter
YPD4_2714	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2715	SSF53613	Ribokinase-like
YPD4_2716	SSF160355	Bacterial polysaccharide co-polymerase-like
YPD4_2717	SSF53738	Phosphoglucomutase, first 3 domains
YPD4_2717	SSF55957	Phosphoglucomutase, C-terminal domain
YPD4_2718	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_2719	SSF51182	RmlC-like cupins
YPD4_2719	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_2720	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2721	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2722	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2723	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_2725	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_2726	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_2728	SSF51905	FAD/NAD(P)-binding domain
YPD4_2729	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2730	SSF53383	PLP-dependent transferases
YPD4_2731	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2732	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_2733	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_2733	SSF54292	2Fe-2S ferredoxin-like
YPD4_2733	SSF63380	Riboflavin synthase domain-like
YPD4_2734	SSF53800	Chelatase
YPD4_2735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2736	SSF110942	HSP90 C-terminal domain
YPD4_2736	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_2736	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2737	SSF111304	Recombination protein RecR
YPD4_2738	SSF82607	YbaB-like
YPD4_2739	SSF48019	post-AAA+ oligomerization domain-like
YPD4_2739	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2740	SSF53271	PRTase-like
YPD4_2742	SSF50182	Sm-like ribonucleoproteins
YPD4_2742	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YPD4_2742	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YPD4_2743	SSF75169	DsrEFH-like
YPD4_2744	SSF46689	Homeodomain-like
YPD4_2744	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPD4_2745	SSF111369	HlyD-like secretion proteins
YPD4_2746	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_2747	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_2747	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPD4_2747	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_2750	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YPD4_2752	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_2753	SSF111352	Ammonium transporter
YPD4_2754	SSF54913	GlnB-like
YPD4_2755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2755	SSF90123	ABC transporter transmembrane region
YPD4_2756	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2756	SSF90123	ABC transporter transmembrane region
YPD4_2757	SSF46785	"Winged helix" DNA-binding domain
YPD4_2757	SSF54909	Dimeric alpha+beta barrel
YPD4_2758	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_2759	SSF56784	HAD-like
YPD4_2760	SSF53850	Periplasmic binding protein-like II
YPD4_2761	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2762	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_2763	SSF47781	RuvA domain 2-like
YPD4_2764	SSF109998	Triger factor/SurA peptide-binding domain-like
YPD4_2764	SSF54534	FKBP-like
YPD4_2765	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_2766	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2766	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_2766	SSF88697	PUA domain-like
YPD4_2767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2767	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPD4_2768	SSF52096	ClpP/crotonase
YPD4_2769	SSF102735	Trigger factor ribosome-binding domain
YPD4_2769	SSF109998	Triger factor/SurA peptide-binding domain-like
YPD4_2769	SSF54534	FKBP-like
YPD4_2770	SSF82657	BolA-like
YPD4_2772	SSF103473	MFS general substrate transporter
YPD4_2773	SSF111364	Tsx-like channel
YPD4_2774	SSF49503	Cupredoxins
YPD4_2774	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
YPD4_2775	SSF81442	Cytochrome c oxidase subunit I-like
YPD4_2776	SSF81452	Cytochrome c oxidase subunit III-like
YPD4_2779	SSF103473	MFS general substrate transporter
YPD4_2780	SSF89963	YajQ-like
YPD4_2781	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_2781	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2782	SSF52317	Class I glutamine amidotransferase-like
YPD4_2783	SSF143437	THUMP domain-like
YPD4_2783	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2783	SSF52821	Rhodanese/Cell cycle control phosphatase
YPD4_2784	SSF48576	Terpenoid synthases
YPD4_2785	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_2785	SSF52922	TK C-terminal domain-like
YPD4_2786	SSF143422	Transposase IS200-like
YPD4_2787	SSF101307	YutG-like
YPD4_2788	SSF55326	PurM N-terminal domain-like
YPD4_2788	SSF56042	PurM C-terminal domain-like
YPD4_2789	SSF48013	NusB-like
YPD4_2790	SSF52121	Lumazine synthase
YPD4_2791	SSF53597	Dihydrofolate reductase-like
YPD4_2791	SSF53927	Cytidine deaminase-like
YPD4_2795	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_2796	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_2798	SSF51713	tRNA-guanine transglycosylase
YPD4_2799	SSF111337	QueA-like
YPD4_2801	SSF52833	Thioredoxin-like
YPD4_2802	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPD4_2803	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2804	SSF51011	Glycosyl hydrolase domain
YPD4_2804	SSF51445	(Trans)glycosidases
YPD4_2804	SSF81296	E set domains
YPD4_2807	SSF53850	Periplasmic binding protein-like II
YPD4_2808	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2808	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_2808	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2809	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_2809	SSF52172	CheY-like
YPD4_2810	SSF56300	Metallo-dependent phosphatases
YPD4_2811	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2812	SSF53067	Actin-like ATPase domain
YPD4_2814	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2816	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2818	SSF53720	ALDH-like
YPD4_2819	SSF53633	Carbamate kinase-like
YPD4_2819	SSF88697	PUA domain-like
YPD4_2821	SSF53474	alpha/beta-Hydrolases
YPD4_2822	SSF53271	PRTase-like
YPD4_2823	SSF49299	PKD domain
YPD4_2823	SSF81296	E set domains
YPD4_2824	SSF53850	Periplasmic binding protein-like II
YPD4_2825	SSF53187	Zn-dependent exopeptidases
YPD4_2826	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
YPD4_2826	SSF56672	DNA/RNA polymerases
YPD4_2827	SSF51695	PLC-like phosphodiesterases
YPD4_2828	SSF143631	ApbE-like
YPD4_2829	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_2829	SSF54292	2Fe-2S ferredoxin-like
YPD4_2829	SSF63380	Riboflavin synthase domain-like
YPD4_2835	SSF141523	L,D-transpeptidase catalytic domain-like
YPD4_2836	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPD4_2837	SSF53697	SIS domain
YPD4_2838	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YPD4_2838	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YPD4_2841	SSF51126	Pectin lyase-like
YPD4_2843	SSF53187	Zn-dependent exopeptidases
YPD4_2843	SSF55031	Bacterial exopeptidase dimerisation domain
YPD4_2844	SSF53383	PLP-dependent transferases
YPD4_2845	SSF46689	Homeodomain-like
YPD4_2845	SSF53098	Ribonuclease H-like
YPD4_2846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2847	SSF53383	PLP-dependent transferases
YPD4_2848	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2849	SSF161098	MetI-like
YPD4_2850	SSF161098	MetI-like
YPD4_2851	SSF53850	Periplasmic binding protein-like II
YPD4_2852	SSF46689	Homeodomain-like
YPD4_2852	SSF53697	SIS domain
YPD4_2853	SSF75304	Amidase signature (AS) enzymes
YPD4_2854	SSF54427	NTF2-like
YPD4_2855	SSF103473	MFS general substrate transporter
YPD4_2858	SSF46785	"Winged helix" DNA-binding domain
YPD4_2859	SSF111369	HlyD-like secretion proteins
YPD4_2860	SSF103473	MFS general substrate transporter
YPD4_2861	SSF103473	MFS general substrate transporter
YPD4_2862	SSF55315	L30e-like
YPD4_2862	SSF75217	alpha/beta knot
YPD4_2864	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2864	SSF52210	Succinyl-CoA synthetase domains
YPD4_2864	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_2864	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_2865	SSF56024	Phospholipase D/nuclease
YPD4_2868	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2869	SSF81923	Double Clp-N motif
YPD4_2870	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
YPD4_2871	SSF55120	Pseudouridine synthase
YPD4_2871	SSF55174	Alpha-L RNA-binding motif
YPD4_2872	SSF48452	TPR-like
YPD4_2873	SSF69754	Ribosome binding protein Y (YfiA homologue)
YPD4_2874	SSF143422	Transposase IS200-like
YPD4_2875	SSF48600	Chorismate mutase II
YPD4_2875	SSF53850	Periplasmic binding protein-like II
YPD4_2875	SSF55021	ACT-like
YPD4_2876	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_2876	SSF48600	Chorismate mutase II
YPD4_2876	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2877	SSF51569	Aldolase
YPD4_2878	SSF51569	Aldolase
YPD4_2879	SSF52172	CheY-like
YPD4_2883	SSF143422	Transposase IS200-like
YPD4_2884	SSF50104	Translation proteins SH3-like domain
YPD4_2885	SSF75217	alpha/beta knot
YPD4_2886	SSF50346	PRC-barrel domain
YPD4_2886	SSF50447	Translation proteins
YPD4_2887	SSF47446	Signal peptide-binding domain
YPD4_2887	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2889	SSF54631	CBS-domain pair
YPD4_2889	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_2890	SSF143422	Transposase IS200-like
YPD4_2891	SSF63411	LuxS/MPP-like metallohydrolase
YPD4_2892	SSF55931	Glutamine synthetase/guanido kinase
YPD4_2894	SSF56784	HAD-like
YPD4_2895	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
YPD4_2895	SSF50447	Translation proteins
YPD4_2895	SSF55186	ThrRS/AlaRS common domain
YPD4_2895	SSF55681	Class II aaRS and biotin synthetases
YPD4_2897	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2897	SSF54752	RecA protein, C-terminal domain
YPD4_2898	SSF142433	CinA-like
YPD4_2899	SSF103473	MFS general substrate transporter
YPD4_2900	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_2900	SSF46785	"Winged helix" DNA-binding domain
YPD4_2901	SSF53743	FucI/AraA N-terminal and middle domains
YPD4_2902	SSF53067	Actin-like ATPase domain
YPD4_2903	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_2903	SSF52922	TK C-terminal domain-like
YPD4_2904	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_2906	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2907	SSF141318	TM0957-like
YPD4_2908	SSF53822	Periplasmic binding protein-like I
YPD4_2909	SSF48113	Heme-dependent peroxidases
YPD4_2910	SSF47175	Cytochromes
YPD4_2911	SSF89155	TorD-like
YPD4_2913	SSF54862	4Fe-4S ferredoxins
YPD4_2914	SSF50692	ADC-like
YPD4_2914	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_2915	SSF53639	AraD/HMP-PK domain-like
YPD4_2916	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_2916	SSF46785	"Winged helix" DNA-binding domain
YPD4_2917	SSF53822	Periplasmic binding protein-like I
YPD4_2918	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2921	SSF51658	Xylose isomerase-like
YPD4_2922	SSF53067	Actin-like ATPase domain
YPD4_2923	SSF117457	FumA C-terminal domain-like
YPD4_2924	SSF55920	Creatinase/aminopeptidase
YPD4_2926	SSF56935	Porins
YPD4_2927	SSF56935	Porins
YPD4_2930	SSF53850	Periplasmic binding protein-like II
YPD4_2931	SSF46785	"Winged helix" DNA-binding domain
YPD4_2933	SSF100950	NagB/RpiA/CoA transferase-like
YPD4_2934	SSF101473	DhaL-like
YPD4_2935	SSF82549	DAK1/DegV-like
YPD4_2936	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2937	SSF50129	GroES-like
YPD4_2937	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2938	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YPD4_2939	SSF48334	DNA repair protein MutS, domain III
YPD4_2939	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2939	SSF53150	DNA repair protein MutS, domain II
YPD4_2939	SSF55271	DNA repair protein MutS, domain I
YPD4_2940	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPD4_2940	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPD4_2941	SSF51261	Duplicated hybrid motif
YPD4_2942	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2943	SSF64167	SurE-like
YPD4_2944	SSF55120	Pseudouridine synthase
YPD4_2945	SSF69765	IpsF-like
YPD4_2946	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_2949	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2950	SSF50447	Translation proteins
YPD4_2950	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPD4_2950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2951	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2952	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_2952	SSF53790	Tetrapyrrole methylase
YPD4_2952	SSF75615	Siroheme synthase middle domains-like
YPD4_2953	SSF143100	TTHA1013/TTHA0281-like
YPD4_2954	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_2955	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
YPD4_2955	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YPD4_2956	SSF52218	Flavoproteins
YPD4_2956	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_2956	SSF63380	Riboflavin synthase domain-like
YPD4_2957	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPD4_2958	SSF102114	Radical SAM enzymes
YPD4_2959	SSF49329	Cu,Zn superoxide dismutase-like
YPD4_2960	SSF51604	Enolase C-terminal domain-like
YPD4_2960	SSF54826	Enolase N-terminal domain-like
YPD4_2961	SSF52317	Class I glutamine amidotransferase-like
YPD4_2961	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2962	SSF101386	all-alpha NTP pyrophosphatases
YPD4_2963	SSF109604	HD-domain/PDEase-like
YPD4_2963	SSF55021	ACT-like
YPD4_2963	SSF81271	TGS-like
YPD4_2963	SSF81301	Nucleotidyltransferase
YPD4_2964	SSF158472	HAMP domain-like
YPD4_2964	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPD4_2964	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_2964	SSF52172	CheY-like
YPD4_2964	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_2965	SSF50156	PDZ domain-like
YPD4_2965	SSF50494	Trypsin-like serine proteases
YPD4_2967	SSF109604	HD-domain/PDEase-like
YPD4_2968	SSF53167	Purine and uridine phosphorylases
YPD4_2969	SSF53807	"Helical backbone" metal receptor
YPD4_2971	SSF89360	HesB-like domain
YPD4_2972	SSF81340	Clc chloride channel
YPD4_2973	SSF53383	PLP-dependent transferases
YPD4_2974	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_2975	SSF53807	"Helical backbone" metal receptor
YPD4_2976	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2977	SSF53955	Lysozyme-like
YPD4_2977	SSF56601	beta-lactamase/transpeptidase-like
YPD4_2978	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2979	SSF55144	LigT-like
YPD4_2981	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
YPD4_2981	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPD4_2982	SSF52374	Nucleotidylyl transferase
YPD4_2983	SSF81301	Nucleotidyltransferase
YPD4_2983	SSF81891	Poly A polymerase C-terminal region-like
YPD4_2984	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
YPD4_2985	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_2986	SSF52374	Nucleotidylyl transferase
YPD4_2987	SSF50692	ADC-like
YPD4_2988	SSF88713	Glycoside hydrolase/deacetylase
YPD4_2990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_2991	SSF53056	beta-carbonic anhydrase, cab
YPD4_2992	SSF53271	PRTase-like
YPD4_2993	SSF49503	Cupredoxins
YPD4_2995	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_2996	SSF56276	S-adenosylmethionine decarboxylase
YPD4_2997	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_2999	SSF52016	LeuD/IlvD-like
YPD4_2999	SSF53732	Aconitase iron-sulfur domain
YPD4_2999	SSF74778	Aconitase B, N-terminal domain
YPD4_3000	SSF143422	Transposase IS200-like
YPD4_3001	SSF51905	FAD/NAD(P)-binding domain
YPD4_3001	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPD4_3002	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YPD4_3002	SSF51230	Single hybrid motif
YPD4_3002	SSF52777	CoA-dependent acyltransferases
YPD4_3003	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_3003	SSF52922	TK C-terminal domain-like
YPD4_3004	SSF46785	"Winged helix" DNA-binding domain
YPD4_3004	SSF48008	GntR ligand-binding domain-like
YPD4_3007	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YPD4_3008	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YPD4_3008	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YPD4_3009	SSF54523	Pili subunits
YPD4_3010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3012	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YPD4_3013	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3014	SSF160950	YacF-like
YPD4_3015	SSF143422	Transposase IS200-like
YPD4_3016	SSF46689	Homeodomain-like
YPD4_3016	SSF53098	Ribonuclease H-like
YPD4_3017	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3018	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_3020	SSF56349	DNA breaking-rejoining enzymes
YPD4_3024	SSF52949	Macro domain-like
YPD4_3024	SSF53187	Zn-dependent exopeptidases
YPD4_3025	SSF102400	DNA polymerase III chi subunit
YPD4_3026	SSF46589	tRNA-binding arm
YPD4_3026	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPD4_3026	SSF50677	ValRS/IleRS/LeuRS editing domain
YPD4_3026	SSF52374	Nucleotidylyl transferase
YPD4_3027	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_3028	SSF89946	Hypothetical protein VC0424
YPD4_3029	SSF53671	Aspartate/ornithine carbamoyltransferase
YPD4_3030	SSF51197	Clavaminate synthase-like
YPD4_3031	SSF53850	Periplasmic binding protein-like II
YPD4_3032	SSF53850	Periplasmic binding protein-like II
YPD4_3033	SSF161098	MetI-like
YPD4_3034	SSF161098	MetI-like
YPD4_3035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3037	SSF51998	PFL-like glycyl radical enzymes
YPD4_3039	SSF46785	"Winged helix" DNA-binding domain
YPD4_3039	SSF64288	Chorismate lyase-like
YPD4_3041	SSF159709	PhnH-like
YPD4_3044	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3046	SSF51338	Composite domain of metallo-dependent hydrolases
YPD4_3046	SSF51556	Metallo-dependent hydrolases
YPD4_3047	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3048	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_3049	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3050	SSF50475	FMN-binding split barrel
YPD4_3051	SSF48230	Chondroitin AC/alginate lyase
YPD4_3052	SSF50331	MOP-like
YPD4_3052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3053	SSF161098	MetI-like
YPD4_3054	SSF161098	MetI-like
YPD4_3055	SSF53850	Periplasmic binding protein-like II
YPD4_3056	SSF48230	Chondroitin AC/alginate lyase
YPD4_3057	SSF48230	Chondroitin AC/alginate lyase
YPD4_3058	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_3059	SSF55718	SCP-like
YPD4_3060	SSF51391	Thiamin phosphate synthase
YPD4_3062	SSF56954	Outer membrane efflux proteins (OEP)
YPD4_3063	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPD4_3063	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPD4_3063	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPD4_3064	SSF111369	HlyD-like secretion proteins
YPD4_3065	SSF51679	Bacterial luciferase-like
YPD4_3066	SSF47413	lambda repressor-like DNA-binding domains
YPD4_3067	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3068	SSF48452	TPR-like
YPD4_3069	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
YPD4_3069	SSF50249	Nucleic acid-binding proteins
YPD4_3069	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_3069	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
YPD4_3069	SSF55666	Ribonuclease PH domain 2-like
YPD4_3070	SSF53098	Ribonuclease H-like
YPD4_3071	SSF46689	Homeodomain-like
YPD4_3071	SSF48295	TrpR-like
YPD4_3074	SSF49879	SMAD/FHA domain
YPD4_3078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3078	SSF81923	Double Clp-N motif
YPD4_3079	SSF46689	Homeodomain-like
YPD4_3082	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3085	SSF69255	gp5 N-terminal domain-like
YPD4_3085	SSF69279	Phage tail proteins
YPD4_3085	SSF69349	Phage fibre proteins
YPD4_3086	SSF55724	Mog1p/PsbP-like
YPD4_3089	SSF160631	SMI1/KNR4-like
YPD4_3090	SSF47413	lambda repressor-like DNA-binding domains
YPD4_3091	SSF69255	gp5 N-terminal domain-like
YPD4_3091	SSF69279	Phage tail proteins
YPD4_3091	SSF69349	Phage fibre proteins
YPD4_3092	SSF55724	Mog1p/PsbP-like
YPD4_3095	SSF51658	Xylose isomerase-like
YPD4_3096	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3096	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_3097	SSF46689	Homeodomain-like
YPD4_3097	SSF51215	Regulatory protein AraC
YPD4_3098	SSF102546	RbsD-like
YPD4_3099	SSF53613	Ribokinase-like
YPD4_3100	SSF51569	Aldolase
YPD4_3101	SSF52218	Flavoproteins
YPD4_3102	SSF53850	Periplasmic binding protein-like II
YPD4_3103	SSF51679	Bacterial luciferase-like
YPD4_3104	SSF161098	MetI-like
YPD4_3105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3110	SSF53822	Periplasmic binding protein-like I
YPD4_3111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3114	SSF53067	Actin-like ATPase domain
YPD4_3115	SSF53697	SIS domain
YPD4_3116	SSF47616	GST C-terminal domain-like
YPD4_3116	SSF52833	Thioredoxin-like
YPD4_3117	SSF63829	Calcium-dependent phosphotriesterase
YPD4_3118	SSF46565	Chaperone J-domain
YPD4_3119	SSF143422	Transposase IS200-like
YPD4_3121	SSF56281	Metallo-hydrolase/oxidoreductase
YPD4_3122	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_3122	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3123	SSF69118	AhpD-like
YPD4_3124	SSF103473	MFS general substrate transporter
YPD4_3125	SSF103473	MFS general substrate transporter
YPD4_3126	SSF46785	"Winged helix" DNA-binding domain
YPD4_3126	SSF48008	GntR ligand-binding domain-like
YPD4_3127	SSF160631	SMI1/KNR4-like
YPD4_3128	SSF51395	FMN-linked oxidoreductases
YPD4_3129	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3131	SSF51246	Rudiment single hybrid motif
YPD4_3131	SSF52440	PreATP-grasp domain
YPD4_3131	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_3132	SSF51230	Single hybrid motif
YPD4_3133	SSF52304	Type II 3-dehydroquinate dehydratase
YPD4_3135	SSF56524	Oxidoreductase molybdopterin-binding domain
YPD4_3136	SSF50129	GroES-like
YPD4_3136	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3137	SSF141868	EAL domain-like
YPD4_3137	SSF55073	Nucleotide cyclase
YPD4_3138	SSF53067	Actin-like ATPase domain
YPD4_3141	SSF52972	ITPase-like
YPD4_3142	SSF50249	Nucleic acid-binding proteins
YPD4_3144	SSF56317	Carbon-nitrogen hydrolase
YPD4_3145	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YPD4_3146	SSF52799	(Phosphotyrosine protein) phosphatases II
YPD4_3147	SSF52799	(Phosphotyrosine protein) phosphatases II
YPD4_3149	SSF55166	Hedgehog/DD-peptidase
YPD4_3151	SSF69318	Integrin alpha N-terminal domain
YPD4_3155	SSF46785	"Winged helix" DNA-binding domain
YPD4_3156	SSF46785	"Winged helix" DNA-binding domain
YPD4_3156	SSF53850	Periplasmic binding protein-like II
YPD4_3157	SSF111369	HlyD-like secretion proteins
YPD4_3159	SSF53720	ALDH-like
YPD4_3160	SSF53720	ALDH-like
YPD4_3161	SSF53933	Microbial ribonucleases
YPD4_3162	SSF158710	PSPTO4464-like
YPD4_3163	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YPD4_3165	SSF47175	Cytochromes
YPD4_3166	SSF54534	FKBP-like
YPD4_3167	SSF51011	Glycosyl hydrolase domain
YPD4_3167	SSF51445	(Trans)glycosidases
YPD4_3168	SSF55604	Glucose permease domain IIB
YPD4_3169	SSF47413	lambda repressor-like DNA-binding domains
YPD4_3169	SSF53822	Periplasmic binding protein-like I
YPD4_3170	SSF69318	Integrin alpha N-terminal domain
YPD4_3171	SSF55298	YjgF-like
YPD4_3172	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
YPD4_3172	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
YPD4_3173	SSF53671	Aspartate/ornithine carbamoyltransferase
YPD4_3174	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3175	SSF55804	Phoshotransferase/anion transport protein
YPD4_3177	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3180	SSF56784	HAD-like
YPD4_3181	SSF53697	SIS domain
YPD4_3183	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3187	SSF52091	SpoIIaa-like
YPD4_3188	SSF55205	EPT/RTPC-like
YPD4_3189	SSF50156	PDZ domain-like
YPD4_3189	SSF50494	Trypsin-like serine proteases
YPD4_3190	SSF143422	Transposase IS200-like
YPD4_3191	SSF50156	PDZ domain-like
YPD4_3191	SSF50494	Trypsin-like serine proteases
YPD4_3193	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3194	SSF52161	Ribosomal protein L13
YPD4_3195	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_3196	SSF47616	GST C-terminal domain-like
YPD4_3196	SSF52833	Thioredoxin-like
YPD4_3197	SSF101738	SspB-like
YPD4_3199	SSF46548	alpha-helical ferredoxin
YPD4_3199	SSF51971	Nucleotide-binding domain
YPD4_3200	SSF51395	FMN-linked oxidoreductases
YPD4_3200	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPD4_3200	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
YPD4_3201	SSF102114	Radical SAM enzymes
YPD4_3202	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPD4_3202	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_3202	SSF52172	CheY-like
YPD4_3202	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_3202	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_3203	SSF52317	Class I glutamine amidotransferase-like
YPD4_3204	SSF53955	Lysozyme-like
YPD4_3206	SSF53697	SIS domain
YPD4_3207	SSF52980	Restriction endonuclease-like
YPD4_3208	SSF53822	Periplasmic binding protein-like I
YPD4_3209	SSF53790	Tetrapyrrole methylase
YPD4_3210	SSF51182	RmlC-like cupins
YPD4_3211	SSF46785	"Winged helix" DNA-binding domain
YPD4_3211	SSF53850	Periplasmic binding protein-like II
YPD4_3212	SSF47616	GST C-terminal domain-like
YPD4_3212	SSF52833	Thioredoxin-like
YPD4_3213	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3215	SSF46689	Homeodomain-like
YPD4_3215	SSF53098	Ribonuclease H-like
YPD4_3216	SSF53474	alpha/beta-Hydrolases
YPD4_3217	SSF54995	Ribosomal protein S6
YPD4_3218	SSF55653	Ribosomal protein L9 C-domain
YPD4_3218	SSF55658	L9 N-domain-like
YPD4_3219	SSF143422	Transposase IS200-like
YPD4_3222	SSF54534	FKBP-like
YPD4_3224	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YPD4_3225	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YPD4_3225	SSF56300	Metallo-dependent phosphatases
YPD4_3226	SSF56655	Carbohydrate phosphatase
YPD4_3227	SSF52833	Thioredoxin-like
YPD4_3228	SSF54631	CBS-domain pair
YPD4_3228	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_3229	SSF55068	Peptide methionine sulfoxide reductase
YPD4_3232	SSF110857	Gamma-glutamyl cyclotransferase-like
YPD4_3233	SSF50324	Inorganic pyrophosphatase
YPD4_3234	SSF56655	Carbohydrate phosphatase
YPD4_3235	SSF51984	MurCD N-terminal domain
YPD4_3235	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPD4_3235	SSF53623	MurD-like peptide ligases, catalytic domain
YPD4_3236	SSF46785	"Winged helix" DNA-binding domain
YPD4_3236	SSF55252	C-terminal domain of arginine repressor
YPD4_3237	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3237	SSF56327	LDH C-terminal domain-like
YPD4_3238	SSF46955	Putative DNA-binding domain
YPD4_3239	SSF48576	Terpenoid synthases
YPD4_3240	SSF141091	L21p-like
YPD4_3241	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_3242	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3242	SSF82051	Obg GTP-binding protein N-terminal domain
YPD4_3243	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_3243	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_3244	SSF52172	CheY-like
YPD4_3245	SSF56601	beta-lactamase/transpeptidase-like
YPD4_3246	SSF46557	GreA transcript cleavage protein, N-terminal domain
YPD4_3246	SSF54534	FKBP-like
YPD4_3247	SSF75471	YhbY-like
YPD4_3248	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3249	SSF140990	FtsH protease domain-like
YPD4_3249	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3250	SSF51717	Dihydropteroate synthetase-like
YPD4_3251	SSF53738	Phosphoglucomutase, first 3 domains
YPD4_3251	SSF55957	Phosphoglucomutase, C-terminal domain
YPD4_3252	SSF74942	YhbC-like, C-terminal domain
YPD4_3252	SSF75420	YhbC-like, N-terminal domain
YPD4_3253	SSF47794	Rad51 N-terminal domain-like
YPD4_3253	SSF50249	Nucleic acid-binding proteins
YPD4_3253	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YPD4_3253	SSF69705	Transcription factor NusA, N-terminal domain
YPD4_3254	SSF46955	Putative DNA-binding domain
YPD4_3254	SSF50447	Translation proteins
YPD4_3254	SSF52156	Initiation factor IF2/eIF5b, domain 3
YPD4_3254	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3255	SSF89919	Ribosome-binding factor A, RbfA
YPD4_3256	SSF55120	Pseudouridine synthase
YPD4_3256	SSF88697	PUA domain-like
YPD4_3257	SSF46689	Homeodomain-like
YPD4_3257	SSF48295	TrpR-like
YPD4_3258	SSF53098	Ribonuclease H-like
YPD4_3259	SSF160719	gpW/gp25-like
YPD4_3262	SSF141452	Hcp1-like
YPD4_3264	SSF56935	Porins
YPD4_3265	SSF50331	MOP-like
YPD4_3265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3266	SSF53850	Periplasmic binding protein-like II
YPD4_3267	SSF160964	MalF N-terminal region-like
YPD4_3267	SSF161098	MetI-like
YPD4_3268	SSF161098	MetI-like
YPD4_3270	SSF53697	SIS domain
YPD4_3271	SSF53633	Carbamate kinase-like
YPD4_3271	SSF55021	ACT-like
YPD4_3274	SSF51126	Pectin lyase-like
YPD4_3275	SSF47644	Methionine synthase domain
YPD4_3275	SSF51717	Dihydropteroate synthetase-like
YPD4_3275	SSF52242	Cobalamin (vitamin B12)-binding domain
YPD4_3275	SSF56507	Methionine synthase activation domain-like
YPD4_3275	SSF82282	Homocysteine S-methyltransferase
YPD4_3276	SSF46785	"Winged helix" DNA-binding domain
YPD4_3277	SSF55781	GAF domain-like
YPD4_3279	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_3280	SSF51645	Malate synthase G
YPD4_3281	SSF52317	Class I glutamine amidotransferase-like
YPD4_3282	SSF52335	Methylglyoxal synthase-like
YPD4_3282	SSF53927	Cytidine deaminase-like
YPD4_3283	SSF51246	Rudiment single hybrid motif
YPD4_3283	SSF52440	PreATP-grasp domain
YPD4_3283	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_3287	SSF51726	UROD/MetE-like
YPD4_3289	SSF55811	Nudix
YPD4_3292	SSF51391	Thiamin phosphate synthase
YPD4_3293	SSF69572	Activating enzymes of the ubiquitin-like proteins
YPD4_3294	SSF110399	ThiG-like
YPD4_3295	SSF102114	Radical SAM enzymes
YPD4_3296	SSF143422	Transposase IS200-like
YPD4_3297	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YPD4_3298	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YPD4_3299	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
YPD4_3299	SSF54736	ClpS-like
YPD4_3300	SSF160369	Ribosomal protein L10-like
YPD4_3301	SSF56808	Ribosomal protein L1
YPD4_3302	SSF46906	Ribosomal protein L11, C-terminal domain
YPD4_3302	SSF54747	Ribosomal L11/L12e N-terminal domain
YPD4_3303	SSF50104	Translation proteins SH3-like domain
YPD4_3303	SSF82679	N-utilization substance G protein NusG, N-terminal domain
YPD4_3304	SSF50447	Translation proteins
YPD4_3304	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPD4_3304	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3306	SSF46689	Homeodomain-like
YPD4_3306	SSF53098	Ribonuclease H-like
YPD4_3307	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_3308	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3309	SSF46785	"Winged helix" DNA-binding domain
YPD4_3309	SSF50037	C-terminal domain of transcriptional repressors
YPD4_3309	SSF55681	Class II aaRS and biotin synthetases
YPD4_3310	SSF56176	FAD-binding/transporter-associated domain-like
YPD4_3310	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
YPD4_3312	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_3312	SSF54980	EF-G C-terminal domain-like
YPD4_3313	SSF143422	Transposase IS200-like
YPD4_3314	SSF55920	Creatinase/aminopeptidase
YPD4_3315	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_3315	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3315	SSF52096	ClpP/crotonase
YPD4_3316	SSF53901	Thiolase-like
YPD4_3317	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPD4_3317	SSF63380	Riboflavin synthase domain-like
YPD4_3318	SSF143968	UbiD C-terminal domain-like
YPD4_3318	SSF50475	FMN-binding split barrel
YPD4_3319	SSF82679	N-utilization substance G protein NusG, N-terminal domain
YPD4_3320	SSF51569	Aldolase
YPD4_3321	SSF51556	Metallo-dependent hydrolases
YPD4_3322	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3323	SSF46689	Homeodomain-like
YPD4_3323	SSF53098	Ribonuclease H-like
YPD4_3324	SSF51556	Metallo-dependent hydrolases
YPD4_3327	SSF56112	Protein kinase-like (PK-like)
YPD4_3328	SSF55718	SCP-like
YPD4_3329	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3333	SSF52799	(Phosphotyrosine protein) phosphatases II
YPD4_3334	SSF53167	Purine and uridine phosphorylases
YPD4_3335	SSF53474	alpha/beta-Hydrolases
YPD4_3336	SSF51726	UROD/MetE-like
YPD4_3337	SSF46785	"Winged helix" DNA-binding domain
YPD4_3337	SSF53850	Periplasmic binding protein-like II
YPD4_3339	SSF51695	PLC-like phosphodiesterases
YPD4_3340	SSF50331	MOP-like
YPD4_3340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3341	SSF161098	MetI-like
YPD4_3342	SSF161098	MetI-like
YPD4_3343	SSF53850	Periplasmic binding protein-like II
YPD4_3346	SSF49354	PapD-like
YPD4_3351	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3352	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3355	SSF53822	Periplasmic binding protein-like I
YPD4_3356	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_3357	SSF143422	Transposase IS200-like
YPD4_3358	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPD4_3358	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPD4_3360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3361	SSF47364	Domain of the SRP/SRP receptor G-proteins
YPD4_3361	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3362	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3366	SSF55008	HMA, heavy metal-associated domain
YPD4_3366	SSF56784	HAD-like
YPD4_3366	SSF81653	Calcium ATPase, transduction domain A
YPD4_3366	SSF81665	Calcium ATPase, transmembrane domain M
YPD4_3367	SSF64307	SirA-like
YPD4_3370	SSF46548	alpha-helical ferredoxin
YPD4_3371	SSF51905	FAD/NAD(P)-binding domain
YPD4_3372	SSF51905	FAD/NAD(P)-binding domain
YPD4_3373	SSF51695	PLC-like phosphodiesterases
YPD4_3375	SSF56784	HAD-like
YPD4_3376	SSF53474	alpha/beta-Hydrolases
YPD4_3379	SSF47819	HRDC-like
YPD4_3379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3380	SSF56931	Outer membrane phospholipase A (OMPLA)
YPD4_3381	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPD4_3382	SSF103481	Multidrug resistance efflux transporter EmrE
YPD4_3383	SSF143865	CorA soluble domain-like
YPD4_3383	SSF144083	Magnesium transport protein CorA, transmembrane region
YPD4_3384	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_3387	SSF46689	Homeodomain-like
YPD4_3388	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3389	SSF56784	HAD-like
YPD4_3390	SSF47823	lambda integrase-like, N-terminal domain
YPD4_3390	SSF56349	DNA breaking-rejoining enzymes
YPD4_3392	SSF54506	Diaminopimelate epimerase-like
YPD4_3393	SSF55387	Frataxin/Nqo15-like
YPD4_3395	SSF53850	Periplasmic binding protein-like II
YPD4_3395	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
YPD4_3396	SSF69618	HemD-like
YPD4_3398	SSF48452	TPR-like
YPD4_3399	SSF143422	Transposase IS200-like
YPD4_3405	SSF53383	PLP-dependent transferases
YPD4_3406	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_3407	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_3408	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3409	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_3409	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3409	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
YPD4_3410	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_3411	SSF160355	Bacterial polysaccharide co-polymerase-like
YPD4_3413	SSF50249	Nucleic acid-binding proteins
YPD4_3413	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3413	SSF68912	Rho N-terminal domain-like
YPD4_3414	SSF52833	Thioredoxin-like
YPD4_3415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3416	SSF109604	HD-domain/PDEase-like
YPD4_3416	SSF53067	Actin-like ATPase domain
YPD4_3417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3418	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
YPD4_3420	SSF49401	Bacterial adhesins
YPD4_3421	SSF49354	PapD-like
YPD4_3421	SSF49584	Periplasmic chaperone C-domain
YPD4_3422	SSF141729	FimD N-terminal domain-like
YPD4_3423	SSF49401	Bacterial adhesins
YPD4_3424	SSF49354	PapD-like
YPD4_3424	SSF49584	Periplasmic chaperone C-domain
YPD4_3425	SSF69369	Cloacin translocation domain
YPD4_3426	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_3426	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3427	SSF46785	"Winged helix" DNA-binding domain
YPD4_3427	SSF53850	Periplasmic binding protein-like II
YPD4_3432	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_3432	SSF55021	ACT-like
YPD4_3433	SSF143975	IlvD/EDD N-terminal domain-like
YPD4_3433	SSF52016	LeuD/IlvD-like
YPD4_3434	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
YPD4_3435	SSF52467	DHS-like NAD/FAD-binding domain
YPD4_3435	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPD4_3436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3436	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_3438	SSF46785	"Winged helix" DNA-binding domain
YPD4_3438	SSF53850	Periplasmic binding protein-like II
YPD4_3441	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3442	SSF53822	Periplasmic binding protein-like I
YPD4_3443	SSF53681	Aspartate/glutamate racemase
YPD4_3444	SSF56935	Porins
YPD4_3445	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3447	SSF46689	Homeodomain-like
YPD4_3448	SSF51905	FAD/NAD(P)-binding domain
YPD4_3448	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPD4_3449	SSF46785	"Winged helix" DNA-binding domain
YPD4_3449	SSF53850	Periplasmic binding protein-like II
YPD4_3450	SSF52833	Thioredoxin-like
YPD4_3451	SSF51905	FAD/NAD(P)-binding domain
YPD4_3451	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPD4_3452	SSF74653	TolA/TonB C-terminal domain
YPD4_3453	SSF111369	HlyD-like secretion proteins
YPD4_3454	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3454	SSF90123	ABC transporter transmembrane region
YPD4_3455	SSF54621	Heme-binding protein A (HasA)
YPD4_3456	SSF56935	Porins
YPD4_3457	SSF48557	L-aspartase-like
YPD4_3458	SSF53633	Carbamate kinase-like
YPD4_3459	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3459	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_3460	SSF53187	Zn-dependent exopeptidases
YPD4_3460	SSF55031	Bacterial exopeptidase dimerisation domain
YPD4_3461	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPD4_3462	SSF46689	Homeodomain-like
YPD4_3462	SSF48295	TrpR-like
YPD4_3463	SSF53098	Ribonuclease H-like
YPD4_3465	SSF51905	FAD/NAD(P)-binding domain
YPD4_3465	SSF54373	FAD-linked reductases, C-terminal domain
YPD4_3466	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_3467	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPD4_3468	SSF51161	Trimeric LpxA-like enzymes
YPD4_3468	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_3469	SSF51011	Glycosyl hydrolase domain
YPD4_3469	SSF51445	(Trans)glycosidases
YPD4_3469	SSF81296	E set domains
YPD4_3470	SSF51011	Glycosyl hydrolase domain
YPD4_3470	SSF51445	(Trans)glycosidases
YPD4_3470	SSF81296	E set domains
YPD4_3471	SSF55781	GAF domain-like
YPD4_3471	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_3472	SSF49373	Invasin/intimin cell-adhesion fragments
YPD4_3473	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3473	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPD4_3476	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3478	SSF47413	lambda repressor-like DNA-binding domains
YPD4_3478	SSF53822	Periplasmic binding protein-like I
YPD4_3479	SSF51182	RmlC-like cupins
YPD4_3480	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_3480	SSF52172	CheY-like
YPD4_3481	SSF53613	Ribokinase-like
YPD4_3482	SSF51569	Aldolase
YPD4_3483	SSF51182	RmlC-like cupins
YPD4_3484	SSF53822	Periplasmic binding protein-like I
YPD4_3486	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3487	SSF158472	HAMP domain-like
YPD4_3487	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPD4_3487	SSF52172	CheY-like
YPD4_3487	SSF55785	PYP-like sensor domain (PAS domain)
YPD4_3487	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_3488	SSF160996	HI0933 insert domain-like
YPD4_3488	SSF51905	FAD/NAD(P)-binding domain
YPD4_3490	SSF143422	Transposase IS200-like
YPD4_3492	SSF52402	Adenine nucleotide alpha hydrolases-like
YPD4_3493	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3493	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPD4_3494	SSF51120	beta-Roll
YPD4_3494	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPD4_3495	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3496	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPD4_3497	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3498	SSF51905	FAD/NAD(P)-binding domain
YPD4_3498	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPD4_3501	SSF110738	Glycerate kinase I
YPD4_3505	SSF103515	Autotransporter
YPD4_3505	SSF51126	Pectin lyase-like
YPD4_3507	SSF54197	HIT-like
YPD4_3509	SSF141868	EAL domain-like
YPD4_3510	SSF53613	Ribokinase-like
YPD4_3511	SSF63411	LuxS/MPP-like metallohydrolase
YPD4_3512	SSF118215	Proton glutamate symport protein
YPD4_3513	SSF49785	Galactose-binding domain-like
YPD4_3515	SSF56935	Porins
YPD4_3516	SSF141868	EAL domain-like
YPD4_3516	SSF55073	Nucleotide cyclase
YPD4_3517	SSF48208	Six-hairpin glycosidases
YPD4_3518	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3520	SSF161098	MetI-like
YPD4_3521	SSF161098	MetI-like
YPD4_3522	SSF53850	Periplasmic binding protein-like II
YPD4_3525	SSF103473	MFS general substrate transporter
YPD4_3526	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_3527	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3528	SSF46689	Homeodomain-like
YPD4_3528	SSF53098	Ribonuclease H-like
YPD4_3530	SSF46894	C-terminal effector domain of the bipartite response regulators
YPD4_3530	SSF52172	CheY-like
YPD4_3531	SSF53649	Alkaline phosphatase-like
YPD4_3532	SSF53474	alpha/beta-Hydrolases
YPD4_3534	SSF48557	L-aspartase-like
YPD4_3535	SSF111326	Urocanase
YPD4_3536	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_3537	SSF53271	PRTase-like
YPD4_3539	SSF56059	Glutathione synthetase ATP-binding domain-like
YPD4_3540	SSF53807	"Helical backbone" metal receptor
YPD4_3541	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_3542	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPD4_3543	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3545	SSF47413	lambda repressor-like DNA-binding domains
YPD4_3547	SSF56349	DNA breaking-rejoining enzymes
YPD4_3548	SSF46689	Homeodomain-like
YPD4_3548	SSF53822	Periplasmic binding protein-like I
YPD4_3550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3551	SSF53822	Periplasmic binding protein-like I
YPD4_3552	SSF51658	Xylose isomerase-like
YPD4_3553	SSF53067	Actin-like ATPase domain
YPD4_3554	SSF49401	Bacterial adhesins
YPD4_3555	SSF49354	PapD-like
YPD4_3555	SSF49584	Periplasmic chaperone C-domain
YPD4_3557	SSF141729	FimD N-terminal domain-like
YPD4_3558	SSF49401	Bacterial adhesins
YPD4_3560	SSF46689	Homeodomain-like
YPD4_3560	SSF48295	TrpR-like
YPD4_3561	SSF53098	Ribonuclease H-like
YPD4_3562	SSF103473	MFS general substrate transporter
YPD4_3566	SSF46785	"Winged helix" DNA-binding domain
YPD4_3566	SSF50447	Translation proteins
YPD4_3566	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPD4_3566	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3567	SSF53383	PLP-dependent transferases
YPD4_3568	SSF144020	FdhE-like
YPD4_3569	SSF81342	Transmembrane di-heme cytochromes
YPD4_3570	SSF54862	4Fe-4S ferredoxins
YPD4_3571	SSF50692	ADC-like
YPD4_3571	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_3572	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPD4_3573	SSF53927	Cytidine deaminase-like
YPD4_3574	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YPD4_3574	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YPD4_3575	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPD4_3579	SSF158668	MtlR-like
YPD4_3580	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPD4_3580	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3584	SSF109604	HD-domain/PDEase-like
YPD4_3585	SSF55681	Class II aaRS and biotin synthetases
YPD4_3586	SSF48150	DNA-glycosylase
YPD4_3587	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_3588	SSF103088	OmpA-like
YPD4_3589	SSF46785	"Winged helix" DNA-binding domain
YPD4_3590	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3590	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPD4_3591	SSF51445	(Trans)glycosidases
YPD4_3593	SSF53383	PLP-dependent transferases
YPD4_3594	SSF116726	TrkA C-terminal domain-like
YPD4_3595	SSF49764	HSP20-like chaperones
YPD4_3596	SSF49764	HSP20-like chaperones
YPD4_3598	SSF82171	DPP6 N-terminal domain-like
YPD4_3600	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPD4_3601	SSF51735	NAD(P)-binding Rossmann-fold domains
YPD4_3602	SSF46689	Homeodomain-like
YPD4_3602	SSF48295	TrpR-like
YPD4_3603	SSF53098	Ribonuclease H-like
YPD4_3604	SSF56784	HAD-like
YPD4_3605	SSF54211	Ribosomal protein S5 domain 2-like
YPD4_3605	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPD4_3605	SSF56719	Type II DNA topoisomerase
YPD4_3606	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3607	SSF55979	DNA clamp
YPD4_3608	SSF48295	TrpR-like
YPD4_3608	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3609	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3611	SSF116878	TrmE connector domain
YPD4_3611	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3615	SSF56784	HAD-like
YPD4_3616	SSF161098	MetI-like
YPD4_3617	SSF161098	MetI-like
YPD4_3618	SSF53850	Periplasmic binding protein-like II
YPD4_3620	SSF109755	PhoU-like
YPD4_3621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3622	SSF161098	MetI-like
YPD4_3623	SSF161098	MetI-like
YPD4_3624	SSF53850	Periplasmic binding protein-like II
YPD4_3625	SSF53697	SIS domain
YPD4_3625	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPD4_3626	SSF51161	Trimeric LpxA-like enzymes
YPD4_3626	SSF53448	Nucleotide-diphospho-sugar transferases
YPD4_3627	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
YPD4_3627	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
YPD4_3628	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YPD4_3628	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YPD4_3628	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3629	SSF52943	ATP synthase (F1-ATPase), gamma subunit
YPD4_3630	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YPD4_3630	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YPD4_3630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_3631	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
YPD4_3632	SSF81573	F1F0 ATP synthase subunit B, membrane domain
YPD4_3633	SSF81336	F1F0 ATP synthase subunit A
YPD4_3635	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_3636	SSF51905	FAD/NAD(P)-binding domain
YPD4_pCD0001	SSF53098	Ribonuclease H-like
YPD4_pCD0002	SSF69635	Type III secretory system chaperone-like
YPD4_pCD0003	SSF47233	Bacterial GAP domain
YPD4_pCD0003	SSF69635	Type III secretory system chaperone-like
YPD4_pCD0005	SSF109709	KorB DNA-binding domain-like
YPD4_pCD0005	SSF110849	ParB/Sulfiredoxin
YPD4_pCD0006	SSF46955	Putative DNA-binding domain
YPD4_pCD0006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pCD0007	SSF53098	Ribonuclease H-like
YPD4_pCD0008	SSF46689	Homeodomain-like
YPD4_pCD0011	SSF54001	Cysteine proteinases
YPD4_pCD0012	SSF69635	Type III secretory system chaperone-like
YPD4_pCD0015	SSF52058	L domain-like
YPD4_pCD0019	SSF48452	TPR-like
YPD4_pCD0020	SSF103388	Virulence-associated V antigen
YPD4_pCD0023	SSF48452	TPR-like
YPD4_pCD0025	SSF69635	Type III secretory system chaperone-like
YPD4_pCD0026	SSF140591	Type III secretion system domain
YPD4_pCD0027	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pCD0030	SSF101801	Surface presentation of antigens (SPOA)
YPD4_pCD0033	SSF160544	EscU C-terminal domain-like
YPD4_pCD0035	SSF46689	Homeodomain-like
YPD4_pCD0035	SSF51215	Regulatory protein AraC
YPD4_pCD0036	SSF69635	Type III secretory system chaperone-like
YPD4_pCD0042	SSF140591	Type III secretion system domain
YPD4_pCD0046	SSF160527	V-type ATPase subunit E-like
YPD4_pCD0047	SSF64449	YopH tyrosine phosphatase N-terminal domain
YPD4_pCD0049	SSF52799	(Phosphotyrosine protein) phosphatases II
YPD4_pCD0049	SSF64449	YopH tyrosine phosphatase N-terminal domain
YPD4_pCD0050	SSF53098	Ribonuclease H-like
YPD4_pCD0052	SSF56112	Protein kinase-like (PK-like)
YPD4_pCD0053	SSF69635	Type III secretory system chaperone-like
YPD4_pCD0056	SSF46689	Homeodomain-like
YPD4_pCD0057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pCD0058	SSF101967	Adhesin YadA, collagen-binding domain
YPD4_pCD0058	SSF54523	Pili subunits
YPD4_pCD0061	SSF46689	Homeodomain-like
YPD4_pCD0061	SSF53041	Resolvase-like
YPD4_pCD0064	SSF53098	Ribonuclease H-like
YPD4_pCD0065	SSF69635	Type III secretory system chaperone-like
YPD4_pCD0066	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0001	SSF46689	Homeodomain-like
YPD4_pMT0001	SSF53098	Ribonuclease H-like
YPD4_pMT0002	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0004	SSF88874	Receptor-binding domain of short tail fibre protein gp12
YPD4_pMT0006	SSF49265	Fibronectin type III
YPD4_pMT0008	SSF102712	JAB1/MPN domain
YPD4_pMT0008	SSF54001	Cysteine proteinases
YPD4_pMT0011	SSF57997	Tropomyosin
YPD4_pMT0013	SSF49373	Invasin/intimin cell-adhesion fragments
YPD4_pMT0019	SSF49373	Invasin/intimin cell-adhesion fragments
YPD4_pMT0020	SSF56563	Major capsid protein gp5
YPD4_pMT0023	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0025	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPD4_pMT0026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0027	SSF110849	ParB/Sulfiredoxin
YPD4_pMT0028	SSF110849	ParB/Sulfiredoxin
YPD4_pMT0029	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0034	SSF143422	Transposase IS200-like
YPD4_pMT0035	SSF53098	Ribonuclease H-like
YPD4_pMT0037	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0038	SSF56300	Metallo-dependent phosphatases
YPD4_pMT0039	SSF53850	Periplasmic binding protein-like II
YPD4_pMT0046	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0047	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YPD4_pMT0047	SSF88723	PIN domain-like
YPD4_pMT0052	SSF52141	Uracil-DNA glycosylase-like
YPD4_pMT0053	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0054	SSF53300	vWA-like
YPD4_pMT0056	SSF56349	DNA breaking-rejoining enzymes
YPD4_pMT0057	SSF49401	Bacterial adhesins
YPD4_pMT0058	SSF141729	FimD N-terminal domain-like
YPD4_pMT0059	SSF49354	PapD-like
YPD4_pMT0059	SSF49584	Periplasmic chaperone C-domain
YPD4_pMT0060	SSF46689	Homeodomain-like
YPD4_pMT0060	SSF55136	Probable bacterial effector-binding domain
YPD4_pMT0064	SSF56672	DNA/RNA polymerases
YPD4_pMT0065	SSF56024	Phospholipase D/nuclease
YPD4_pMT0066	SSF56024	Phospholipase D/nuclease
YPD4_pMT0068	SSF53041	Resolvase-like
YPD4_pMT0069	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pMT0072	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPD4_pMT0076	SSF109709	KorB DNA-binding domain-like
YPD4_pMT0076	SSF110849	ParB/Sulfiredoxin
YPD4_pPCP0001	SSF46689	Homeodomain-like
YPD4_pPCP0001	SSF53098	Ribonuclease H-like
YPD4_pPCP0002	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPD4_pPCP0005	SSF53955	Lysozyme-like
YPD4_pPCP0007	SSF69917	OMPT-like
YPD4_pPCP0008	SSF47413	lambda repressor-like DNA-binding domains