YPD8_0002 SM00344 helix_turn_helix ASNC type YPD8_0004 SM00327 von Willebrand factor (vWF) type A domain YPD8_0005 SM00382 ATPases associated with a variety of cellular activities YPD8_0010 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_0010 SM00895 YPD8_0010 YPD8_0017 SM00475 5'-3' exonuclease YPD8_0018 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPD8_0018 SM00474 3'-5' exonuclease YPD8_0018 SM00482 DNA polymerase A domain YPD8_0019 SM01321 YPD8_0019 YPD8_0022 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_0023 SM00382 ATPases associated with a variety of cellular activities YPD8_0023 SM00448 cheY-homologous receiver domain YPD8_0024 SM00091 PAS domain YPD8_0024 SM00387 Histidine kinase-like ATPases YPD8_0024 SM00388 His Kinase A (phosphoacceptor) domain YPD8_0025 SM01230 YPD8_0025 YPD8_0030 SM00382 ATPases associated with a variety of cellular activities YPD8_0036 SM00487 DEAD-like helicases superfamily YPD8_0036 SM00490 helicase superfamily c-terminal domain YPD8_0038 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPD8_0038 SM00954 Region found in RelA / SpoT proteins YPD8_0039 SM00072 Guanylate kinase homologues. YPD8_0040 SM00532 Ligase N family YPD8_0050 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain YPD8_0050 SM01232 YPD8_0050 YPD8_0058 SM00829 Enoylreductase YPD8_0063 SM00450 Rhodanese Homology Domain YPD8_0066 SM00971 Serine acetyltransferase, N-terminal YPD8_0068 SM00342 helix_turn_helix, arabinose operon control protein YPD8_0069 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_0069 SM00387 Histidine kinase-like ATPases YPD8_0069 SM00388 His Kinase A (phosphoacceptor) domain YPD8_0070 SM00448 cheY-homologous receiver domain YPD8_0070 SM00862 Transcriptional regulatory protein, C terminal YPD8_0088 SM01321 YPD8_0088 YPD8_0089 SM00382 ATPases associated with a variety of cellular activities YPD8_0094 SM00382 ATPases associated with a variety of cellular activities YPD8_0094 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_0097 SM00354 helix_turn _helix lactose operon repressor YPD8_0098 SM00487 DEAD-like helicases superfamily YPD8_0098 SM00490 helicase superfamily c-terminal domain YPD8_0106 SM00420 helix_turn_helix, Deoxyribose operon repressor YPD8_0106 SM01134 YPD8_0106 YPD8_0108 SM00450 Rhodanese Homology Domain YPD8_0109 SM00421 helix_turn_helix, Lux Regulon YPD8_0111 SM00382 ATPases associated with a variety of cellular activities YPD8_0120 SM00316 Ribosomal protein S1-like RNA-binding domain YPD8_0120 SM00732 Likely ribonuclease with RNase H fold. YPD8_0123 SM00448 cheY-homologous receiver domain YPD8_0123 SM00862 Transcriptional regulatory protein, C terminal YPD8_0124 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_0124 SM00387 Histidine kinase-like ATPases YPD8_0124 SM00388 His Kinase A (phosphoacceptor) domain YPD8_0127 SM00363 S4 RNA-binding domain YPD8_0152 SM00354 helix_turn _helix lactose operon repressor YPD8_0159 SM00100 Cyclic nucleotide-monophosphate binding domain YPD8_0159 SM00419 helix_turn_helix, cAMP Regulatory protein YPD8_0165 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_0166 SM00382 ATPases associated with a variety of cellular activities YPD8_0172 SM00382 ATPases associated with a variety of cellular activities YPD8_0185 SM01321 YPD8_0185 YPD8_0187 SM01403 YPD8_0187 YPD8_0191 SM01382 YPD8_0191 YPD8_0191 SM01383 YPD8_0191 YPD8_0193 SM00322 K homology RNA-binding domain YPD8_0195 SM01374 YPD8_0195 YPD8_0196 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPD8_0205 SM00363 S4 RNA-binding domain YPD8_0205 SM01390 YPD8_0205 YPD8_0206 SM00662 RNA polymerases D YPD8_0208 SM00422 helix_turn_helix, mercury resistance YPD8_0220 SM00382 ATPases associated with a variety of cellular activities YPD8_0227 SM00421 helix_turn_helix, Lux Regulon YPD8_0227 SM00448 cheY-homologous receiver domain YPD8_0228 SM00387 Histidine kinase-like ATPases YPD8_0228 SM00388 His Kinase A (phosphoacceptor) domain YPD8_0228 SM00448 cheY-homologous receiver domain YPD8_0231 SM00342 helix_turn_helix, arabinose operon control protein YPD8_0236 SM00382 ATPases associated with a variety of cellular activities YPD8_0247 SM00382 ATPases associated with a variety of cellular activities YPD8_0254 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_0271 SM00060 Fibronectin type 3 domain YPD8_0272 SM00869 Autotransporter beta-domain YPD8_0275 SM00563 Phosphate acyltransferases YPD8_0280 SM00829 Enoylreductase YPD8_0281 SM00382 ATPases associated with a variety of cellular activities YPD8_0282 SM01005 Alanine racemase, C-terminal domain YPD8_0289 SM01007 Class II Aldolase and Adducin N-terminal domain YPD8_0292 SM00342 helix_turn_helix, arabinose operon control protein YPD8_0293 SM00342 helix_turn_helix, arabinose operon control protein YPD8_0296 SM01276 YPD8_0296 YPD8_0300 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPD8_0309 SM00841 Elongation factor P, C-terminal YPD8_0309 SM01185 YPD8_0309 YPD8_0319 SM00479 YPD8_0319 YPD8_0323 SM00257 Lysin motif YPD8_0323 SM00646 YPD8_0323 YPD8_0324 SM01340 YPD8_0324 YPD8_0325 SM00853 MutL C terminal dimerisation domain YPD8_0329 SM00244 prohibitin homologues YPD8_0330 SM00244 prohibitin homologues YPD8_0331 SM00788 Adenylosuccinate synthetase YPD8_0333 SM00316 Ribosomal protein S1-like RNA-binding domain YPD8_0333 SM00357 Cold shock protein domain YPD8_0333 SM00955 YPD8_0333 YPD8_0334 SM00967 RNA 2'-O ribose methyltransferase substrate binding YPD8_0336 SM00382 ATPases associated with a variety of cellular activities YPD8_0338 SM00382 ATPases associated with a variety of cellular activities YPD8_0348 SM00342 helix_turn_helix, arabinose operon control protein YPD8_0354 SM01133 YPD8_0354 YPD8_0358 SM00382 ATPases associated with a variety of cellular activities YPD8_0367 SM00267 diguanylate cyclase YPD8_0372 SM00749 bacterial OsmY and nodulation domain YPD8_0376 SM01133 YPD8_0376 YPD8_0378 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain YPD8_0383 SM00382 ATPases associated with a variety of cellular activities YPD8_0384 SM00530 Helix-turn-helix XRE-family like proteins YPD8_0386 SM00382 ATPases associated with a variety of cellular activities YPD8_0389 SM00267 diguanylate cyclase YPD8_0391 SM00831 Cation transporter/ATPase, N-terminus YPD8_0395 SM00855 Phosphoglycerate mutase family YPD8_0396 SM00342 helix_turn_helix, arabinose operon control protein YPD8_0396 SM00871 Bacterial transcription activator, effector binding domain YPD8_0398 SM00448 cheY-homologous receiver domain YPD8_0398 SM00862 Transcriptional regulatory protein, C terminal YPD8_0404 SM00852 Probable molybdopterin binding domain YPD8_0409 SM00271 DnaJ molecular chaperone homology domain YPD8_0413 SM00904 Riboflavin kinase YPD8_0418 SM01321 YPD8_0418 YPD8_0420 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain YPD8_0421 SM00851 MGS-like domain YPD8_0421 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YPD8_0426 SM01321 YPD8_0426 YPD8_0430 SM00650 Ribosomal RNA adenine dimethylases YPD8_0434 SM00271 DnaJ molecular chaperone homology domain YPD8_0444 SM00382 ATPases associated with a variety of cellular activities YPD8_0444 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_0455 SM00487 DEAD-like helicases superfamily YPD8_0455 SM00490 helicase superfamily c-terminal domain YPD8_0456 SM00486 DNA polymerase type-B family YPD8_0458 SM00382 ATPases associated with a variety of cellular activities YPD8_0463 SM00382 ATPases associated with a variety of cellular activities YPD8_0467 SM01329 YPD8_0467 YPD8_0468 SM00917 LeuA allosteric (dimerisation) domain YPD8_0469 SM01321 YPD8_0469 YPD8_0474 SM01321 YPD8_0474 YPD8_0475 SM00354 helix_turn _helix lactose operon repressor YPD8_0491 SM00842 Cell division protein FtsA YPD8_0492 SM00864 Tubulin/FtsZ family, GTPase domain YPD8_0492 SM00865 Tubulin/FtsZ family, C-terminal domain YPD8_0496 SM00957 SecA DEAD-like domain YPD8_0496 SM00958 SecA preprotein cross-linking domain YPD8_0498 SM00382 ATPases associated with a variety of cellular activities YPD8_0507 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_0507 SM00895 YPD8_0507 YPD8_0511 SM00858 YPD8_0511 YPD8_0513 SM01321 YPD8_0513 YPD8_0517 SM00869 Autotransporter beta-domain YPD8_0521 SM00220 Serine/Threonine protein kinases, catalytic domain YPD8_0523 SM00327 von Willebrand factor (vWF) type A domain YPD8_0524 SM00327 von Willebrand factor (vWF) type A domain YPD8_0526 SM00327 von Willebrand factor (vWF) type A domain YPD8_0528 SM00912 haemagglutination activity domain YPD8_0530 SM00869 Autotransporter beta-domain YPD8_0533 SM00382 ATPases associated with a variety of cellular activities YPD8_0535 SM00354 helix_turn _helix lactose operon repressor YPD8_0540 SM01217 YPD8_0540 YPD8_0559 SM00493 YPD8_0559 YPD8_0561 SM01207 YPD8_0561 YPD8_0562 SM00905 Dihydroneopterin aldolase YPD8_0564 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPD8_0565 SM00287 Bacterial SH3 domain homologues YPD8_0579 SM00387 Histidine kinase-like ATPases YPD8_0579 SM00433 TopoisomeraseII YPD8_0582 SM00434 DNA Topoisomerase IV YPD8_0583 SM00563 Phosphate acyltransferases YPD8_0589 SM00342 helix_turn_helix, arabinose operon control protein YPD8_0606 SM01321 YPD8_0606 YPD8_0607 SM01321 YPD8_0607 YPD8_0620 SM00382 ATPases associated with a variety of cellular activities YPD8_0625 SM00382 ATPases associated with a variety of cellular activities YPD8_0628 SM00858 YPD8_0628 YPD8_0633 SM01321 YPD8_0633 YPD8_0642 SM00862 Transcriptional regulatory protein, C terminal YPD8_0659 SM00354 helix_turn _helix lactose operon repressor YPD8_0666 SM00869 Autotransporter beta-domain YPD8_0667 SM00869 Autotransporter beta-domain YPD8_0672 SM00382 ATPases associated with a variety of cellular activities YPD8_0673 SM00382 ATPases associated with a variety of cellular activities YPD8_0681 SM00382 ATPases associated with a variety of cellular activities YPD8_0683 SM00823 Phosphopantetheine attachment site YPD8_0683 SM00825 Beta-ketoacyl synthase YPD8_0687 SM00364 Leucine-rich repeats, bacterial type YPD8_0687 SM00369 Leucine-rich repeats, typical (most populated) subfamily YPD8_0688 SM00364 Leucine-rich repeats, bacterial type YPD8_0689 SM00364 Leucine-rich repeats, bacterial type YPD8_0690 SM00869 Autotransporter beta-domain YPD8_0695 SM00052 Putative diguanylate phosphodiesterase YPD8_0695 SM00091 PAS domain YPD8_0695 SM00267 diguanylate cyclase YPD8_0702 SM01006 Siderophore biosynthesis protein domain YPD8_0708 SM00421 helix_turn_helix, Lux Regulon YPD8_0717 SM00382 ATPases associated with a variety of cellular activities YPD8_0717 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_0723 SM00382 ATPases associated with a variety of cellular activities YPD8_0728 SM00478 endonuclease III YPD8_0728 SM00525 YPD8_0728 YPD8_0734 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_0739 SM00382 ATPases associated with a variety of cellular activities YPD8_0742 SM00732 Likely ribonuclease with RNase H fold. YPD8_0747 SM00731 SprT homologues. YPD8_0752 SM00861 Transketolase, pyrimidine binding domain YPD8_0753 SM01321 YPD8_0753 YPD8_0754 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPD8_0766 SM01011 Aminopeptidase P, N-terminal domain YPD8_0779 SM00448 cheY-homologous receiver domain YPD8_0779 SM00862 Transcriptional regulatory protein, C terminal YPD8_0780 SM00387 Histidine kinase-like ATPases YPD8_0780 SM00388 His Kinase A (phosphoacceptor) domain YPD8_0786 SM00937 YPD8_0786 YPD8_0789 SM00530 Helix-turn-helix XRE-family like proteins YPD8_0790 SM00530 Helix-turn-helix XRE-family like proteins YPD8_0791 SM00778 Zinc-binding domain of primase-helicase YPD8_0791 SM00885 D5 N terminal like YPD8_0806 SM00382 ATPases associated with a variety of cellular activities YPD8_0807 SM00382 ATPases associated with a variety of cellular activities YPD8_0817 SM00354 helix_turn _helix lactose operon repressor YPD8_0820 SM00354 helix_turn _helix lactose operon repressor YPD8_0836 SM00420 helix_turn_helix, Deoxyribose operon repressor YPD8_0836 SM01134 YPD8_0836 YPD8_0838 SM01321 YPD8_0838 YPD8_0839 SM01321 YPD8_0839 YPD8_0841 SM00382 ATPases associated with a variety of cellular activities YPD8_0846 SM00947 Carbonic anhydrase YPD8_0850 SM00382 ATPases associated with a variety of cellular activities YPD8_0859 SM00862 Transcriptional regulatory protein, C terminal YPD8_0860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_0860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_0860 SM00319 Homologues of the ligand binding domain of Tar YPD8_0862 SM00849 Metallo-beta-lactamase superfamily YPD8_0867 SM00354 helix_turn _helix lactose operon repressor YPD8_0870 SM00563 Phosphate acyltransferases YPD8_0873 SM00927 DNA mismatch repair enzyme MutH YPD8_0875 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YPD8_0880 SM00382 ATPases associated with a variety of cellular activities YPD8_0881 SM00825 Beta-ketoacyl synthase YPD8_0882 SM01321 YPD8_0882 YPD8_0886 SM00382 ATPases associated with a variety of cellular activities YPD8_0887 SM00981 YPD8_0887 YPD8_0896 SM00849 Metallo-beta-lactamase superfamily YPD8_0899 SM01321 YPD8_0899 YPD8_0906 SM01150 YPD8_0906 YPD8_0908 SM00382 ATPases associated with a variety of cellular activities YPD8_0909 SM00849 Metallo-beta-lactamase superfamily YPD8_0910 SM00316 Ribosomal protein S1-like RNA-binding domain YPD8_0916 SM00870 YPD8_0916 YPD8_0924 SM00382 ATPases associated with a variety of cellular activities YPD8_0926 SM00843 YPD8_0926 YPD8_0927 SM00344 helix_turn_helix ASNC type YPD8_0929 SM00382 ATPases associated with a variety of cellular activities YPD8_0930 SM00382 ATPases associated with a variety of cellular activities YPD8_0932 SM01321 YPD8_0932 YPD8_0933 SM00382 ATPases associated with a variety of cellular activities YPD8_0933 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_0935 SM00382 ATPases associated with a variety of cellular activities YPD8_0947 SM00830 Chorismate mutase type II YPD8_0948 SM00382 ATPases associated with a variety of cellular activities YPD8_0949 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_0949 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPD8_0955 SM00382 ATPases associated with a variety of cellular activities YPD8_0960 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_0960 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPD8_0965 SM00382 ATPases associated with a variety of cellular activities YPD8_0971 SM00014 Acid phosphatase homologues YPD8_0972 SM01133 YPD8_0972 YPD8_0973 SM00420 helix_turn_helix, Deoxyribose operon repressor YPD8_0973 SM01134 YPD8_0973 YPD8_0975 SM00936 Penicillin-binding protein 5, C-terminal domain YPD8_0977 SM00382 ATPases associated with a variety of cellular activities YPD8_0977 SM00930 YPD8_0977 YPD8_0983 SM00382 ATPases associated with a variety of cellular activities YPD8_0990 SM00518 AP endonuclease family 2 YPD8_0995 SM00862 Transcriptional regulatory protein, C terminal YPD8_1001 SM00382 ATPases associated with a variety of cellular activities YPD8_1010 SM00841 Elongation factor P, C-terminal YPD8_1010 SM01185 YPD8_1010 YPD8_1013 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_1013 SM00895 YPD8_1013 YPD8_1014 SM00833 Cobalamin synthesis protein cobW C-terminal domain YPD8_1015 SM00014 Acid phosphatase homologues YPD8_1017 SM00052 Putative diguanylate phosphodiesterase YPD8_1021 SM00382 ATPases associated with a variety of cellular activities YPD8_1024 SM00363 S4 RNA-binding domain YPD8_1025 SM00487 DEAD-like helicases superfamily YPD8_1025 SM00490 helicase superfamily c-terminal domain YPD8_1026 SM01321 YPD8_1026 YPD8_1049 SM00420 helix_turn_helix, Deoxyribose operon repressor YPD8_1049 SM01134 YPD8_1049 YPD8_1050 SM01007 Class II Aldolase and Adducin N-terminal domain YPD8_1053 SM00530 Helix-turn-helix XRE-family like proteins YPD8_1055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_1055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_1059 SM01321 YPD8_1059 YPD8_1064 SM00421 helix_turn_helix, Lux Regulon YPD8_1064 SM00448 cheY-homologous receiver domain YPD8_1065 SM00387 Histidine kinase-like ATPases YPD8_1065 SM00388 His Kinase A (phosphoacceptor) domain YPD8_1065 SM00448 cheY-homologous receiver domain YPD8_1066 SM00434 DNA Topoisomerase IV YPD8_1071 SM00852 Probable molybdopterin binding domain YPD8_1074 SM01060 YPD8_1074 YPD8_1075 SM00487 DEAD-like helicases superfamily YPD8_1075 SM00488 YPD8_1075 YPD8_1075 SM00491 YPD8_1075 YPD8_1081 SM00382 ATPases associated with a variety of cellular activities YPD8_1085 SM00450 Rhodanese Homology Domain YPD8_1088 SM00382 ATPases associated with a variety of cellular activities YPD8_1097 SM00382 ATPases associated with a variety of cellular activities YPD8_1099 SM00507 HNH nucleases YPD8_1100 SM01118 YPD8_1100 YPD8_1105 SM01321 YPD8_1105 YPD8_1114 SM01321 YPD8_1114 YPD8_1118 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_1120 SM00487 DEAD-like helicases superfamily YPD8_1120 SM00490 helicase superfamily c-terminal domain YPD8_1121 SM00382 ATPases associated with a variety of cellular activities YPD8_1125 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_1125 SM00876 Biotin and Thiamin Synthesis associated domain YPD8_1130 SM00382 ATPases associated with a variety of cellular activities YPD8_1134 SM00382 ATPases associated with a variety of cellular activities YPD8_1141 SM00855 Phosphoglycerate mutase family YPD8_1143 SM00382 ATPases associated with a variety of cellular activities YPD8_1158 SM00881 CoA binding domain YPD8_1161 SM00861 Transketolase, pyrimidine binding domain YPD8_1173 SM01321 YPD8_1173 YPD8_1182 SM00382 ATPases associated with a variety of cellular activities YPD8_1191 SM00646 YPD8_1191 YPD8_1192 SM00925 MltA specific insert domain YPD8_1199 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPD8_1199 SM00475 5'-3' exonuclease YPD8_1203 SM01321 YPD8_1203 YPD8_1209 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPD8_1218 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPD8_1220 SM00935 Outer membrane protein (OmpH-like) YPD8_1226 SM00481 DNA polymerase alpha chain like domain YPD8_1230 SM00977 TilS substrate C-terminal domain YPD8_1232 SM01322 YPD8_1232 YPD8_1240 SM00382 ATPases associated with a variety of cellular activities YPD8_1240 SM00930 YPD8_1240 YPD8_1245 SM00257 Lysin motif YPD8_1247 SM00849 Metallo-beta-lactamase superfamily YPD8_1250 SM00479 YPD8_1250 YPD8_1254 SM00382 ATPases associated with a variety of cellular activities YPD8_1260 SM01321 YPD8_1260 YPD8_1267 SM00851 MGS-like domain YPD8_1269 SM00881 CoA binding domain YPD8_1270 SM00992 Hemimethylated DNA-binding protein YccV like YPD8_1271 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPD8_1278 SM00825 Beta-ketoacyl synthase YPD8_1285 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPD8_1292 SM00382 ATPases associated with a variety of cellular activities YPD8_1293 SM00382 ATPases associated with a variety of cellular activities YPD8_1293 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_1314 SM00382 ATPases associated with a variety of cellular activities YPD8_1323 SM00749 bacterial OsmY and nodulation domain YPD8_1330 SM00481 DNA polymerase alpha chain like domain YPD8_1332 SM00363 S4 RNA-binding domain YPD8_1335 SM00822 YPD8_1335 YPD8_1338 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPD8_1338 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPD8_1338 SM00493 YPD8_1338 YPD8_1344 SM00014 Acid phosphatase homologues YPD8_1346 SM00028 Tetratricopeptide repeats YPD8_1348 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YPD8_1350 SM01007 Class II Aldolase and Adducin N-terminal domain YPD8_1354 SM00357 Cold shock protein domain YPD8_1354 SM00955 YPD8_1354 YPD8_1357 SM00478 endonuclease III YPD8_1357 SM00525 YPD8_1357 YPD8_1359 SM00900 YPD8_1359 YPD8_1361 SM00342 helix_turn_helix, arabinose operon control protein YPD8_1369 SM00382 ATPases associated with a variety of cellular activities YPD8_1373 SM00382 ATPases associated with a variety of cellular activities YPD8_1375 SM00342 helix_turn_helix, arabinose operon control protein YPD8_1389 SM00354 helix_turn _helix lactose operon repressor YPD8_1404 SM00098 Alkaline phosphatase homologues YPD8_1406 SM00100 Cyclic nucleotide-monophosphate binding domain YPD8_1406 SM00419 helix_turn_helix, cAMP Regulatory protein YPD8_1409 SM01002 Alanine dehydrogenase/PNT, C-terminal domain YPD8_1409 SM01003 Alanine dehydrogenase/PNT, N-terminal domain YPD8_1413 SM00448 cheY-homologous receiver domain YPD8_1413 SM00862 Transcriptional regulatory protein, C terminal YPD8_1414 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_1414 SM00387 Histidine kinase-like ATPases YPD8_1414 SM00388 His Kinase A (phosphoacceptor) domain YPD8_1416 SM01321 YPD8_1416 YPD8_1418 SM00867 YceI-like domain YPD8_1420 SM00020 Trypsin-like serine protease YPD8_1421 SM00530 Helix-turn-helix XRE-family like proteins YPD8_1423 SM00382 ATPases associated with a variety of cellular activities YPD8_1423 SM00487 DEAD-like helicases superfamily YPD8_1423 SM00490 helicase superfamily c-terminal domain YPD8_1423 SM00847 Helicase associated domain (HA2) Add an annotation YPD8_1434 SM00890 Domain of unknown function YPD8_1437 SM00422 helix_turn_helix, mercury resistance YPD8_1441 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPD8_1445 SM01321 YPD8_1445 YPD8_1446 SM00091 PAS domain YPD8_1446 SM00382 ATPases associated with a variety of cellular activities YPD8_1448 SM00953 YPD8_1448 YPD8_1453 SM00382 ATPases associated with a variety of cellular activities YPD8_1454 SM01321 YPD8_1454 YPD8_1458 SM00382 ATPases associated with a variety of cellular activities YPD8_1459 SM00382 ATPases associated with a variety of cellular activities YPD8_1465 SM00363 S4 RNA-binding domain YPD8_1470 SM00347 helix_turn_helix multiple antibiotic resistance protein YPD8_1477 SM00479 YPD8_1477 YPD8_1489 SM01321 YPD8_1489 YPD8_1491 SM00382 ATPases associated with a variety of cellular activities YPD8_1496 SM00382 ATPases associated with a variety of cellular activities YPD8_1516 SM00382 ATPases associated with a variety of cellular activities YPD8_1520 SM01321 YPD8_1520 YPD8_1521 SM00873 B3/4 domain YPD8_1521 SM00874 tRNA synthetase B5 domain YPD8_1521 SM00896 Ferredoxin-fold anticodon binding domain YPD8_1525 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPD8_1529 SM00382 ATPases associated with a variety of cellular activities YPD8_1542 SM00421 helix_turn_helix, Lux Regulon YPD8_1550 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPD8_1555 SM00634 Bacterial Ig-like domain (group 1) YPD8_1562 SM00382 ATPases associated with a variety of cellular activities YPD8_1563 SM00382 ATPases associated with a variety of cellular activities YPD8_1575 SM01350 YPD8_1575 YPD8_1584 SM00382 ATPases associated with a variety of cellular activities YPD8_1586 SM01006 Siderophore biosynthesis protein domain YPD8_1590 SM01091 Transporter associated domain YPD8_1596 SM01321 YPD8_1596 YPD8_1604 SM00919 Malic enzyme, NAD binding domain YPD8_1604 SM01274 YPD8_1604 YPD8_1607 SM00382 ATPases associated with a variety of cellular activities YPD8_1613 SM00829 Enoylreductase YPD8_1617 SM00382 ATPases associated with a variety of cellular activities YPD8_1619 SM00852 Probable molybdopterin binding domain YPD8_1624 SM00155 Phospholipase D. Active site motifs. YPD8_1626 SM00382 ATPases associated with a variety of cellular activities YPD8_1627 SM00382 ATPases associated with a variety of cellular activities YPD8_1634 SM00382 ATPases associated with a variety of cellular activities YPD8_1636 SM00528 Domain in histone-like proteins of HNS family YPD8_1637 SM00984 UDP binding domain YPD8_1638 SM00448 cheY-homologous receiver domain YPD8_1645 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPD8_1645 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPD8_1645 SM00493 YPD8_1645 YPD8_1649 SM00870 YPD8_1649 YPD8_1652 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPD8_1655 SM00763 PrkA AAA domain YPD8_1663 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_1674 SM00060 Fibronectin type 3 domain YPD8_1677 SM01040 BRO family, N-terminal domain YPD8_1679 SM00232 JAB/MPN domain YPD8_1681 SM01321 YPD8_1681 YPD8_1685 SM00635 Bacterial Ig-like domain 2 YPD8_1690 SM00635 Bacterial Ig-like domain 2 YPD8_1704 SM01040 BRO family, N-terminal domain YPD8_1707 SM00382 ATPases associated with a variety of cellular activities YPD8_1715 SM00341 Helicase and RNase D C-terminal YPD8_1715 SM00474 3'-5' exonuclease YPD8_1719 SM00487 DEAD-like helicases superfamily YPD8_1719 SM00491 YPD8_1719 YPD8_1728 SM00257 Lysin motif YPD8_1730 SM00382 ATPases associated with a variety of cellular activities YPD8_1732 SM00382 ATPases associated with a variety of cellular activities YPD8_1733 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPD8_1744 SM00836 DALR anticodon binding domain YPD8_1744 SM01016 Arginyl tRNA synthetase N terminal dom YPD8_1745 SM00912 haemagglutination activity domain YPD8_1753 SM00481 DNA polymerase alpha chain like domain YPD8_1757 SM01321 YPD8_1757 YPD8_1768 SM00937 YPD8_1768 YPD8_1772 SM01400 YPD8_1772 YPD8_1776 SM00450 Rhodanese Homology Domain YPD8_1783 SM00448 cheY-homologous receiver domain YPD8_1783 SM00862 Transcriptional regulatory protein, C terminal YPD8_1784 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_1784 SM00387 Histidine kinase-like ATPases YPD8_1784 SM00388 His Kinase A (phosphoacceptor) domain YPD8_1794 SM00671 Sel1-like repeats. YPD8_1795 SM00671 Sel1-like repeats. YPD8_1811 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_1811 SM00866 YPD8_1811 YPD8_1814 SM00382 ATPases associated with a variety of cellular activities YPD8_1822 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_1823 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_1823 SM00387 Histidine kinase-like ATPases YPD8_1835 SM00382 ATPases associated with a variety of cellular activities YPD8_1843 SM00420 helix_turn_helix, Deoxyribose operon repressor YPD8_1843 SM01134 YPD8_1843 YPD8_1856 SM00421 helix_turn_helix, Lux Regulon YPD8_1856 SM00448 cheY-homologous receiver domain YPD8_1857 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_1857 SM00387 Histidine kinase-like ATPases YPD8_1857 SM00388 His Kinase A (phosphoacceptor) domain YPD8_1857 SM00448 cheY-homologous receiver domain YPD8_1866 SM00382 ATPases associated with a variety of cellular activities YPD8_1868 SM00382 ATPases associated with a variety of cellular activities YPD8_1869 SM00342 helix_turn_helix, arabinose operon control protein YPD8_1870 SM00823 Phosphopantetheine attachment site YPD8_1879 SM00382 ATPases associated with a variety of cellular activities YPD8_1881 SM00382 ATPases associated with a variety of cellular activities YPD8_1886 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_1886 SM00866 YPD8_1886 YPD8_1895 SM01321 YPD8_1895 YPD8_1897 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPD8_1898 SM00465 GIY-YIG type nucleases (URI domain) YPD8_1899 SM00421 helix_turn_helix, Lux Regulon YPD8_1899 SM00448 cheY-homologous receiver domain YPD8_1914 SM00382 ATPases associated with a variety of cellular activities YPD8_1916 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_1916 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPD8_1924 SM00342 helix_turn_helix, arabinose operon control protein YPD8_1927 SM00478 endonuclease III YPD8_1933 SM00382 ATPases associated with a variety of cellular activities YPD8_1946 SM00382 ATPases associated with a variety of cellular activities YPD8_1949 SM01007 Class II Aldolase and Adducin N-terminal domain YPD8_1953 SM00047 Lysozyme subfamily 2 YPD8_1962 SM00858 YPD8_1962 YPD8_1965 SM00634 Bacterial Ig-like domain (group 1) YPD8_1966 SM01321 YPD8_1966 YPD8_1979 SM01022 YPD8_1979 YPD8_1981 SM00487 DEAD-like helicases superfamily YPD8_1981 SM00490 helicase superfamily c-terminal domain YPD8_1986 SM00903 Flavin reductase like domain YPD8_1996 SM00347 helix_turn_helix multiple antibiotic resistance protein YPD8_1997 SM01091 Transporter associated domain YPD8_2004 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPD8_2004 SM00091 PAS domain YPD8_2004 SM00267 diguanylate cyclase YPD8_2009 SM00342 helix_turn_helix, arabinose operon control protein YPD8_2010 SM00382 ATPases associated with a variety of cellular activities YPD8_2011 SM00090 RIO-like kinase YPD8_2013 SM00382 ATPases associated with a variety of cellular activities YPD8_2015 SM00354 helix_turn _helix lactose operon repressor YPD8_2022 SM00382 ATPases associated with a variety of cellular activities YPD8_2028 SM00346 helix_turn_helix isocitrate lyase regulation YPD8_2037 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPD8_2037 SM00245 tail specific protease YPD8_2038 SM00945 ProQ/FINO family YPD8_2043 SM00972 Spore Coat Protein U domain YPD8_2044 SM00972 Spore Coat Protein U domain YPD8_2047 SM00972 Spore Coat Protein U domain YPD8_2048 SM01022 YPD8_2048 YPD8_2050 SM00382 ATPases associated with a variety of cellular activities YPD8_2052 SM01005 Alanine racemase, C-terminal domain YPD8_2056 SM00644 YPD8_2056 YPD8_2058 SM00448 cheY-homologous receiver domain YPD8_2059 SM00448 cheY-homologous receiver domain YPD8_2060 SM00138 Methyltransferase, chemotaxis proteins YPD8_2061 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_2061 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_2061 SM00319 Homologues of the ligand binding domain of Tar YPD8_2062 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_2062 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_2062 SM00319 Homologues of the ligand binding domain of Tar YPD8_2065 SM00869 Autotransporter beta-domain YPD8_2070 SM00260 Two component signalling adaptor domain YPD8_2071 SM00073 Histidine Phosphotransfer domain YPD8_2071 SM00260 Two component signalling adaptor domain YPD8_2071 SM00387 Histidine kinase-like ATPases YPD8_2071 SM01231 YPD8_2071 YPD8_2075 SM00831 Cation transporter/ATPase, N-terminus YPD8_2077 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_2077 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_2077 SM00319 Homologues of the ligand binding domain of Tar YPD8_2079 SM01038 Beta galactosidase small chain YPD8_2080 SM00829 Enoylreductase YPD8_2082 SM00344 helix_turn_helix ASNC type YPD8_2087 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPD8_2087 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_2088 SM00354 helix_turn _helix lactose operon repressor YPD8_2089 SM01329 YPD8_2089 YPD8_2097 SM00448 cheY-homologous receiver domain YPD8_2097 SM00862 Transcriptional regulatory protein, C terminal YPD8_2099 SM00387 Histidine kinase-like ATPases YPD8_2099 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2100 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. YPD8_2105 SM00382 ATPases associated with a variety of cellular activities YPD8_2121 SM01321 YPD8_2121 YPD8_2128 SM01321 YPD8_2128 YPD8_2129 SM00825 Beta-ketoacyl synthase YPD8_2130 SM00822 YPD8_2130 YPD8_2131 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPD8_2136 SM01321 YPD8_2136 YPD8_2137 SM00363 S4 RNA-binding domain YPD8_2138 SM00316 Ribosomal protein S1-like RNA-binding domain YPD8_2141 SM00354 helix_turn _helix lactose operon repressor YPD8_2155 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YPD8_2156 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPD8_2156 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YPD8_2169 SM00354 helix_turn _helix lactose operon repressor YPD8_2180 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPD8_2184 SM00382 ATPases associated with a variety of cellular activities YPD8_2186 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPD8_2186 SM00091 PAS domain YPD8_2186 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_2187 SM00382 ATPases associated with a variety of cellular activities YPD8_2189 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_2189 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPD8_2199 SM00829 Enoylreductase YPD8_2202 SM00382 ATPases associated with a variety of cellular activities YPD8_2204 SM00354 helix_turn _helix lactose operon repressor YPD8_2206 SM01329 YPD8_2206 YPD8_2217 SM00382 ATPases associated with a variety of cellular activities YPD8_2219 SM00354 helix_turn _helix lactose operon repressor YPD8_2239 SM00421 helix_turn_helix, Lux Regulon YPD8_2242 SM00450 Rhodanese Homology Domain YPD8_2244 SM00421 helix_turn_helix, Lux Regulon YPD8_2250 SM01359 YPD8_2250 YPD8_2250 SM01360 YPD8_2250 YPD8_2258 SM00382 ATPases associated with a variety of cellular activities YPD8_2266 SM00382 ATPases associated with a variety of cellular activities YPD8_2271 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_2284 SM00382 ATPases associated with a variety of cellular activities YPD8_2287 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_2289 SM00116 Domain in cystathionine beta-synthase and other proteins. YPD8_2289 SM01091 Transporter associated domain YPD8_2292 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_2300 SM01321 YPD8_2300 YPD8_2303 SM01081 Putative carbohydrate binding domain YPD8_2309 SM00382 ATPases associated with a variety of cellular activities YPD8_2314 SM00382 ATPases associated with a variety of cellular activities YPD8_2326 SM00382 ATPases associated with a variety of cellular activities YPD8_2327 SM00382 ATPases associated with a variety of cellular activities YPD8_2331 SM00988 UreE urease accessory protein, N-terminal domain YPD8_2344 SM00342 helix_turn_helix, arabinose operon control protein YPD8_2349 SM00448 cheY-homologous receiver domain YPD8_2349 SM00862 Transcriptional regulatory protein, C terminal YPD8_2350 SM00387 Histidine kinase-like ATPases YPD8_2350 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2358 SM00796 Allophanate hydrolase subunit 1 YPD8_2359 SM00797 Allophanate hydrolase subunit 2 YPD8_2364 SM00986 Uracil DNA glycosylase superfamily YPD8_2364 SM00987 UreE urease accessory protein, C-terminal domain YPD8_2367 SM00248 ankyrin repeats YPD8_2368 SM00487 DEAD-like helicases superfamily YPD8_2368 SM00490 helicase superfamily c-terminal domain YPD8_2378 SM00358 Double-stranded RNA binding motif YPD8_2378 SM00535 Ribonuclease III family YPD8_2382 SM00382 ATPases associated with a variety of cellular activities YPD8_2385 SM01321 YPD8_2385 YPD8_2390 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_2392 SM01211 YPD8_2392 YPD8_2395 SM01321 YPD8_2395 YPD8_2396 SM00387 Histidine kinase-like ATPases YPD8_2396 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2398 SM00382 ATPases associated with a variety of cellular activities YPD8_2398 SM00448 cheY-homologous receiver domain YPD8_2400 SM00938 Nitrogen regulatory protein P-II YPD8_2410 SM01321 YPD8_2410 YPD8_2416 SM00271 DnaJ molecular chaperone homology domain YPD8_2423 SM00869 Autotransporter beta-domain YPD8_2424 SM00247 Beta/gamma crystallins YPD8_2425 SM00562 YPD8_2425 YPD8_2427 SM00028 Tetratricopeptide repeats YPD8_2428 SM00530 Helix-turn-helix XRE-family like proteins YPD8_2432 SM00564 beta-propeller repeat YPD8_2436 SM00116 Domain in cystathionine beta-synthase and other proteins. YPD8_2436 SM01240 YPD8_2436 YPD8_2438 SM01321 YPD8_2438 YPD8_2446 SM00046 Diacylglycerol kinase catalytic domain (presumed) YPD8_2449 SM00448 cheY-homologous receiver domain YPD8_2449 SM00862 Transcriptional regulatory protein, C terminal YPD8_2450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_2450 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2455 SM00382 ATPases associated with a variety of cellular activities YPD8_2456 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_2462 SM00924 MgtE intracellular N domain YPD8_2467 SM00382 ATPases associated with a variety of cellular activities YPD8_2474 SM01321 YPD8_2474 YPD8_2479 SM00563 Phosphate acyltransferases YPD8_2481 SM00195 Dual specificity phosphatase, catalytic domain YPD8_2481 SM00404 Protein tyrosine phosphatase, catalytic domain motif YPD8_2484 SM00382 ATPases associated with a variety of cellular activities YPD8_2490 SM01217 YPD8_2490 YPD8_2496 SM00869 Autotransporter beta-domain YPD8_2506 SM00052 Putative diguanylate phosphodiesterase YPD8_2508 SM00382 ATPases associated with a variety of cellular activities YPD8_2511 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_2520 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPD8_2522 SM00342 helix_turn_helix, arabinose operon control protein YPD8_2527 SM00825 Beta-ketoacyl synthase YPD8_2535 SM00463 Small MutS-related domain YPD8_2536 SM00855 Phosphoglycerate mutase family YPD8_2549 SM00382 ATPases associated with a variety of cellular activities YPD8_2561 SM00382 ATPases associated with a variety of cellular activities YPD8_2575 SM00382 ATPases associated with a variety of cellular activities YPD8_2575 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_2584 SM00421 helix_turn_helix, Lux Regulon YPD8_2588 SM00382 ATPases associated with a variety of cellular activities YPD8_2591 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPD8_2610 SM01321 YPD8_2610 YPD8_2613 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPD8_2613 SM00292 breast cancer carboxy-terminal domain YPD8_2613 SM00532 Ligase N family YPD8_2614 SM00771 ZipA, C-terminal domain (FtsZ-binding) YPD8_2619 SM01321 YPD8_2619 YPD8_2620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_2620 SM00387 Histidine kinase-like ATPases YPD8_2620 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2621 SM00448 cheY-homologous receiver domain YPD8_2621 SM00862 Transcriptional regulatory protein, C terminal YPD8_2623 SM00382 ATPases associated with a variety of cellular activities YPD8_2624 SM00450 Rhodanese Homology Domain YPD8_2628 SM00327 von Willebrand factor (vWF) type A domain YPD8_2629 SM00387 Histidine kinase-like ATPases YPD8_2629 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2630 SM00448 cheY-homologous receiver domain YPD8_2630 SM00862 Transcriptional regulatory protein, C terminal YPD8_2633 SM00382 ATPases associated with a variety of cellular activities YPD8_2641 SM00364 Leucine-rich repeats, bacterial type YPD8_2644 SM01130 YPD8_2644 YPD8_2648 SM00869 Autotransporter beta-domain YPD8_2653 SM00919 Malic enzyme, NAD binding domain YPD8_2653 SM01274 YPD8_2653 YPD8_2657 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPD8_2659 SM00421 helix_turn_helix, Lux Regulon YPD8_2659 SM00448 cheY-homologous receiver domain YPD8_2665 SM00382 ATPases associated with a variety of cellular activities YPD8_2676 SM01321 YPD8_2676 YPD8_2678 SM01130 YPD8_2678 YPD8_2686 SM01321 YPD8_2686 YPD8_2687 SM00840 YPD8_2687 YPD8_2690 SM01001 AIR carboxylase YPD8_2693 SM00382 ATPases associated with a variety of cellular activities YPD8_2695 SM00822 YPD8_2695 YPD8_2697 SM00244 prohibitin homologues YPD8_2699 SM00422 helix_turn_helix, mercury resistance YPD8_2727 SM00387 Histidine kinase-like ATPases YPD8_2728 SM00493 YPD8_2728 YPD8_2730 SM00382 ATPases associated with a variety of cellular activities YPD8_2744 SM00938 Nitrogen regulatory protein P-II YPD8_2745 SM00382 ATPases associated with a variety of cellular activities YPD8_2746 SM00382 ATPases associated with a variety of cellular activities YPD8_2747 SM00344 helix_turn_helix ASNC type YPD8_2755 SM00382 ATPases associated with a variety of cellular activities YPD8_2755 SM00464 Found in ATP-dependent protease La (LON) YPD8_2756 SM00382 ATPases associated with a variety of cellular activities YPD8_2756 SM00994 ClpX C4-type zinc finger YPD8_2756 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_2773 SM00981 YPD8_2773 YPD8_2775 SM00861 Transketolase, pyrimidine binding domain YPD8_2776 SM01321 YPD8_2776 YPD8_2785 SM01321 YPD8_2785 YPD8_2788 SM01323 YPD8_2788 YPD8_2795 SM00642 Alpha-amylase domain YPD8_2797 SM00382 ATPases associated with a variety of cellular activities YPD8_2802 SM00091 PAS domain YPD8_2802 SM00387 Histidine kinase-like ATPases YPD8_2802 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2803 SM00448 cheY-homologous receiver domain YPD8_2803 SM00862 Transcriptional regulatory protein, C terminal YPD8_2813 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPD8_2817 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins YPD8_2826 SM00900 YPD8_2826 YPD8_2835 SM00710 Parallel beta-helix repeats YPD8_2835 SM00912 haemagglutination activity domain YPD8_2840 SM00382 ATPases associated with a variety of cellular activities YPD8_2842 SM00382 ATPases associated with a variety of cellular activities YPD8_2845 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_2852 SM00347 helix_turn_helix multiple antibiotic resistance protein YPD8_2858 SM01144 YPD8_2858 YPD8_2859 SM00881 CoA binding domain YPD8_2860 SM00155 Phospholipase D. Active site motifs. YPD8_2863 SM00382 ATPases associated with a variety of cellular activities YPD8_2863 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_2865 SM00363 S4 RNA-binding domain YPD8_2868 SM01321 YPD8_2868 YPD8_2869 SM00830 Chorismate mutase type II YPD8_2871 SM00382 ATPases associated with a variety of cellular activities YPD8_2873 SM00830 Chorismate mutase type II YPD8_2875 SM00448 cheY-homologous receiver domain YPD8_2875 SM00850 LytTr DNA-binding domain YPD8_2879 SM01321 YPD8_2879 YPD8_2883 SM00382 ATPases associated with a variety of cellular activities YPD8_2883 SM00962 SRP54-type protein, GTPase domain YPD8_2883 SM00963 SRP54-type protein, helical bundle domain YPD8_2885 SM01091 Transporter associated domain YPD8_2886 SM01321 YPD8_2886 YPD8_2891 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPD8_2893 SM00382 ATPases associated with a variety of cellular activities YPD8_2900 SM00861 Transketolase, pyrimidine binding domain YPD8_2903 SM00382 ATPases associated with a variety of cellular activities YPD8_2912 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPD8_2913 SM01007 Class II Aldolase and Adducin N-terminal domain YPD8_2914 SM00420 helix_turn_helix, Deoxyribose operon repressor YPD8_2914 SM01134 YPD8_2914 YPD8_2916 SM01321 YPD8_2916 YPD8_2917 SM00382 ATPases associated with a variety of cellular activities YPD8_2927 SM01235 YPD8_2927 YPD8_2928 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_2929 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YPD8_2932 SM01120 YPD8_2932 YPD8_2935 SM00829 Enoylreductase YPD8_2937 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YPD8_2937 SM00534 ATPase domain of DNA mismatch repair MUTS family YPD8_2958 SM01192 YPD8_2958 YPD8_2958 SM01193 YPD8_2958 YPD8_2961 SM00954 Region found in RelA / SpoT proteins YPD8_2962 SM00073 Histidine Phosphotransfer domain YPD8_2962 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_2962 SM00387 Histidine kinase-like ATPases YPD8_2962 SM00388 His Kinase A (phosphoacceptor) domain YPD8_2962 SM00448 cheY-homologous receiver domain YPD8_2963 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPD8_2964 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPD8_2973 SM00382 ATPases associated with a variety of cellular activities YPD8_2976 SM00487 DEAD-like helicases superfamily YPD8_2976 SM00490 helicase superfamily c-terminal domain YPD8_2976 SM00847 Helicase associated domain (HA2) Add an annotation YPD8_2989 SM00382 ATPases associated with a variety of cellular activities YPD8_2990 SM00947 Carbonic anhydrase YPD8_3000 SM01321 YPD8_3000 YPD8_3004 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_3004 SM00895 YPD8_3004 YPD8_3007 SM00644 YPD8_3007 YPD8_3012 SM01240 YPD8_3012 YPD8_3015 SM01321 YPD8_3015 YPD8_3017 SM00382 ATPases associated with a variety of cellular activities YPD8_3034 SM00382 ATPases associated with a variety of cellular activities YPD8_3035 SM00382 ATPases associated with a variety of cellular activities YPD8_3038 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_3038 SM00866 YPD8_3038 YPD8_3043 SM00382 ATPases associated with a variety of cellular activities YPD8_3044 SM00382 ATPases associated with a variety of cellular activities YPD8_3046 SM00072 Guanylate kinase homologues. YPD8_3047 SM00849 Metallo-beta-lactamase superfamily YPD8_3048 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPD8_3051 SM00382 ATPases associated with a variety of cellular activities YPD8_3065 SM00530 Helix-turn-helix XRE-family like proteins YPD8_3066 SM00487 DEAD-like helicases superfamily YPD8_3066 SM00490 helicase superfamily c-terminal domain YPD8_3067 SM00028 Tetratricopeptide repeats YPD8_3068 SM00316 Ribosomal protein S1-like RNA-binding domain YPD8_3068 SM00322 K homology RNA-binding domain YPD8_3074 SM00316 Ribosomal protein S1-like RNA-binding domain YPD8_3074 SM00322 K homology RNA-binding domain YPD8_3079 SM00382 ATPases associated with a variety of cellular activities YPD8_3083 SM00448 cheY-homologous receiver domain YPD8_3083 SM00862 Transcriptional regulatory protein, C terminal YPD8_3084 SM00387 Histidine kinase-like ATPases YPD8_3084 SM00388 His Kinase A (phosphoacceptor) domain YPD8_3108 SM01321 YPD8_3108 YPD8_3113 SM00382 ATPases associated with a variety of cellular activities YPD8_3121 SM00749 bacterial OsmY and nodulation domain YPD8_3124 SM00073 Histidine Phosphotransfer domain YPD8_3124 SM00091 PAS domain YPD8_3124 SM00387 Histidine kinase-like ATPases YPD8_3124 SM00388 His Kinase A (phosphoacceptor) domain YPD8_3124 SM00448 cheY-homologous receiver domain YPD8_3125 SM00729 Elongator protein 3, MiaB family, Radical SAM YPD8_3135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPD8_3136 SM01321 YPD8_3136 YPD8_3137 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPD8_3143 SM00382 ATPases associated with a variety of cellular activities YPD8_3145 SM00116 Domain in cystathionine beta-synthase and other proteins. YPD8_3149 SM00382 ATPases associated with a variety of cellular activities YPD8_3157 SM00354 helix_turn _helix lactose operon repressor YPD8_3159 SM00642 Alpha-amylase domain YPD8_3184 SM00316 Ribosomal protein S1-like RNA-binding domain YPD8_3189 SM00052 Putative diguanylate phosphodiesterase YPD8_3189 SM00267 diguanylate cyclase YPD8_3190 SM00829 Enoylreductase YPD8_3195 SM00878 Biotin carboxylase C-terminal domain YPD8_3200 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPD8_3200 SM00895 YPD8_3200 YPD8_3204 SM00849 Metallo-beta-lactamase superfamily YPD8_3206 SM01321 YPD8_3206 YPD8_3214 SM00382 ATPases associated with a variety of cellular activities YPD8_3220 SM00382 ATPases associated with a variety of cellular activities YPD8_3223 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_3225 SM01133 YPD8_3225 YPD8_3228 SM00342 helix_turn_helix, arabinose operon control protein YPD8_3235 SM00530 Helix-turn-helix XRE-family like proteins YPD8_3236 SM00860 SMI1 / KNR4 family YPD8_3248 SM00382 ATPases associated with a variety of cellular activities YPD8_3248 SM01086 C-terminal, D2-small domain, of ClpB protein YPD8_3263 SM00382 ATPases associated with a variety of cellular activities YPD8_3273 SM00912 haemagglutination activity domain YPD8_3274 SM01018 B12 binding domain YPD8_3275 SM00346 helix_turn_helix isocitrate lyase regulation YPD8_3281 SM00798 AICARFT/IMPCHase bienzyme YPD8_3281 SM00851 MGS-like domain YPD8_3282 SM00798 AICARFT/IMPCHase bienzyme YPD8_3283 SM01209 YPD8_3283 YPD8_3283 SM01210 YPD8_3283 YPD8_3295 SM00876 Biotin and Thiamin Synthesis associated domain YPD8_3296 SM01321 YPD8_3296 YPD8_3297 SM00663 RNA polymerase I subunit A N-terminus YPD8_3302 SM00649 Ribosomal protein L11/L12 YPD8_3303 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPD8_3303 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPD8_3306 SM00382 ATPases associated with a variety of cellular activities YPD8_3314 SM01321 YPD8_3314 YPD8_3320 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPD8_3320 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPD8_3321 SM01004 Delta-aminolevulinic acid dehydratase YPD8_3323 SM00382 ATPases associated with a variety of cellular activities YPD8_3341 SM00382 ATPases associated with a variety of cellular activities YPD8_3352 SM00382 ATPases associated with a variety of cellular activities YPD8_3353 SM00382 ATPases associated with a variety of cellular activities YPD8_3358 SM01321 YPD8_3358 YPD8_3361 SM00382 ATPases associated with a variety of cellular activities YPD8_3362 SM00382 ATPases associated with a variety of cellular activities YPD8_3362 SM00962 SRP54-type protein, GTPase domain YPD8_3362 SM00963 SRP54-type protein, helical bundle domain YPD8_3380 SM00341 Helicase and RNase D C-terminal YPD8_3380 SM00487 DEAD-like helicases superfamily YPD8_3380 SM00490 helicase superfamily c-terminal domain YPD8_3380 SM00956 YPD8_3380 YPD8_3393 SM01219 YPD8_3393 YPD8_3399 SM01321 YPD8_3399 YPD8_3409 SM00984 UDP binding domain YPD8_3413 SM00357 Cold shock protein domain YPD8_3413 SM00382 ATPases associated with a variety of cellular activities YPD8_3413 SM00959 Rho termination factor, N-terminal domain YPD8_3415 SM00487 DEAD-like helicases superfamily YPD8_3415 SM00490 helicase superfamily c-terminal domain YPD8_3438 SM00382 ATPases associated with a variety of cellular activities YPD8_3443 SM00382 ATPases associated with a variety of cellular activities YPD8_3456 SM00382 ATPases associated with a variety of cellular activities YPD8_3461 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPD8_3471 SM00642 Alpha-amylase domain YPD8_3472 SM00642 Alpha-amylase domain YPD8_3475 SM00257 Lysin motif YPD8_3475 SM00634 Bacterial Ig-like domain (group 1) YPD8_3476 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPD8_3481 SM00354 helix_turn _helix lactose operon repressor YPD8_3483 SM00448 cheY-homologous receiver domain YPD8_3483 SM00862 Transcriptional regulatory protein, C terminal YPD8_3489 SM00382 ATPases associated with a variety of cellular activities YPD8_3490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_3490 SM00387 Histidine kinase-like ATPases YPD8_3490 SM00388 His Kinase A (phosphoacceptor) domain YPD8_3490 SM00448 cheY-homologous receiver domain YPD8_3493 SM01321 YPD8_3493 YPD8_3496 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YPD8_3497 SM00235 Zinc-dependent metalloprotease YPD8_3515 SM00052 Putative diguanylate phosphodiesterase YPD8_3522 SM00052 Putative diguanylate phosphodiesterase YPD8_3522 SM00267 diguanylate cyclase YPD8_3524 SM00382 ATPases associated with a variety of cellular activities YPD8_3530 SM00912 haemagglutination activity domain YPD8_3532 SM00387 Histidine kinase-like ATPases YPD8_3533 SM00382 ATPases associated with a variety of cellular activities YPD8_3536 SM00421 helix_turn_helix, Lux Regulon YPD8_3536 SM00448 cheY-homologous receiver domain YPD8_3549 SM00382 ATPases associated with a variety of cellular activities YPD8_3551 SM00530 Helix-turn-helix XRE-family like proteins YPD8_3554 SM00342 helix_turn_helix, arabinose operon control protein YPD8_3557 SM00382 ATPases associated with a variety of cellular activities YPD8_3579 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPD8_3582 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPD8_3582 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPD8_3582 SM01358 YPD8_3582 YPD8_3597 SM00642 Alpha-amylase domain YPD8_3612 SM00387 Histidine kinase-like ATPases YPD8_3612 SM00433 TopoisomeraseII YPD8_3614 SM00480 DNA polymerase III beta subunit YPD8_3615 SM00382 ATPases associated with a variety of cellular activities YPD8_3615 SM00760 Bacterial dnaA protein helix-turn-helix domain YPD8_3624 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_3627 SM00382 ATPases associated with a variety of cellular activities YPD8_3634 SM00382 ATPases associated with a variety of cellular activities YPD8_3642 SM01228 YPD8_3642 YPD8_pCD0005 SM00470 ParB-like nuclease domain YPD8_pCD0017 SM00364 Leucine-rich repeats, bacterial type YPD8_pCD0029 SM00382 ATPases associated with a variety of cellular activities YPD8_pCD0037 SM00342 helix_turn_helix, arabinose operon control protein YPD8_pCD0050 SM00194 Protein tyrosine phosphatase, catalytic domain YPD8_pCD0050 SM00404 Protein tyrosine phosphatase, catalytic domain motif YPD8_pCD0053 SM00220 Serine/Threonine protein kinases, catalytic domain YPD8_pCD0062 SM00857 Resolvase, N terminal domain YPD8_pMT0002 SM00382 ATPases associated with a variety of cellular activities YPD8_pMT0008 SM00232 JAB/MPN domain YPD8_pMT0013 SM00635 Bacterial Ig-like domain 2 YPD8_pMT0019 SM00635 Bacterial Ig-like domain 2 YPD8_pMT0027 SM00382 ATPases associated with a variety of cellular activities YPD8_pMT0028 SM00470 ParB-like nuclease domain YPD8_pMT0029 SM00470 ParB-like nuclease domain YPD8_pMT0030 SM00487 DEAD-like helicases superfamily YPD8_pMT0030 SM00490 helicase superfamily c-terminal domain YPD8_pMT0034 SM01321 YPD8_pMT0034 YPD8_pMT0039 SM00062 Bacterial periplasmic substrate-binding proteins YPD8_pMT0045 SM00244 prohibitin homologues YPD8_pMT0047 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPD8_pMT0047 SM00475 5'-3' exonuclease YPD8_pMT0050 SM00382 ATPases associated with a variety of cellular activities YPD8_pMT0054 SM00481 DNA polymerase alpha chain like domain YPD8_pMT0062 SM00342 helix_turn_helix, arabinose operon control protein YPD8_pMT0067 SM00155 Phospholipase D. Active site motifs. YPD8_pMT0071 SM00857 Resolvase, N terminal domain YPD8_pMT0074 SM00470 ParB-like nuclease domain YPD8_pMT0075 SM00382 ATPases associated with a variety of cellular activities YPD8_pMT0080 SM00470 ParB-like nuclease domain YPD8_pPCP0002 SM00382 ATPases associated with a variety of cellular activities YPD8_pPCP0008 SM00530 Helix-turn-helix XRE-family like proteins