locus-tag class description M0M60_00005 PF00308 Bacterial dnaA protein M0M60_00005 PF08299 Bacterial dnaA protein helix-turn-helix M0M60_00005 PF11638 DnaA N-terminal domain M0M60_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M0M60_00010 PF02767 DNA polymerase III beta subunit, central domain M0M60_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M0M60_00015 PF02463 RecF/RecN/SMC N terminal domain M0M60_00020 PF00204 DNA gyrase B M0M60_00020 PF00986 DNA gyrase B subunit, carboxyl terminus M0M60_00020 PF18053 DNA gyrase B subunit insert domain M0M60_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_00020 PF01751 Toprim domain M0M60_00035 PF02423 Ornithine cyclodeaminase/mu-crystallin family M0M60_00040 PF13291 ACT domain M0M60_00040 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_00050 PF07119 Protein of unknown function (DUF1375) M0M60_00055 PF00011 Hsp20/alpha crystallin family M0M60_00060 PF00011 Hsp20/alpha crystallin family M0M60_00065 PF06826 Predicted Permease Membrane Region M0M60_00065 PF02080 TrkA-C domain M0M60_00070 PF00155 Aminotransferase class I and II M0M60_00080 PF00128 Alpha amylase, catalytic domain M0M60_00085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0M60_00085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0M60_00095 PF00691 OmpA family M0M60_00095 PF13488 Glycine zipper M0M60_00105 PF03352 Methyladenine glycosylase M0M60_00110 PF02091 Glycyl-tRNA synthetase alpha subunit M0M60_00115 PF05746 DALR anticodon binding domain M0M60_00115 PF02092 Glycyl-tRNA synthetase beta subunit M0M60_00120 PF11254 Protein of unknown function (DUF3053) M0M60_00125 PF02378 Phosphotransferase system, EIIC M0M60_00125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0M60_00125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0M60_00130 PF08125 Mannitol dehydrogenase C-terminal domain M0M60_00130 PF01232 Mannitol dehydrogenase Rossmann domain M0M60_00135 PF05068 Mannitol repressor M0M60_00140 PF10928 Protein of unknown function (DUF2810) M0M60_00155 PF00672 HAMP domain M0M60_00155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0M60_00155 PF02203 Tar ligand binding domain homologue M0M60_00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0M60_00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0M60_00175 PF09163 Formate dehydrogenase N, transmembrane M0M60_00175 PF13247 4Fe-4S dicluster domain M0M60_00180 PF01292 Prokaryotic cytochrome b561 M0M60_00185 PF04216 Protein involved in formate dehydrogenase formation M0M60_00190 PF12390 Selenocysteine synthase N terminal M0M60_00190 PF03841 L-seryl-tRNA selenium transferase M0M60_00225 PF07690 Major Facilitator Superfamily M0M60_00240 PF01757 Acyltransferase family M0M60_00245 PF00419 Fimbrial protein M0M60_00255 PF00577 Outer membrane usher protein M0M60_00255 PF13953 PapC C-terminal domain M0M60_00255 PF13954 PapC N-terminal domain M0M60_00260 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_00260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_00270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_00270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_00280 PF13407 Periplasmic binding protein domain M0M60_00285 PF00005 ABC transporter M0M60_00290 PF02653 Branched-chain amino acid transport system / permease component M0M60_00295 PF12833 Helix-turn-helix domain M0M60_00305 PF14659 Phage integrase, N-terminal SAM-like domain M0M60_00305 PF13356 Arm DNA-binding domain M0M60_00305 PF00589 Phage integrase family M0M60_00315 PF04606 Ogr/Delta-like zinc finger M0M60_00350 PF00005 ABC transporter M0M60_00355 PF01032 FecCD transport family M0M60_00360 PF01032 FecCD transport family M0M60_00365 PF01497 Periplasmic binding protein M0M60_00380 PF00156 Phosphoribosyl transferase domain M0M60_00385 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_00390 PF01175 Urocanase Rossmann-like domain M0M60_00390 PF17392 Urocanase C-terminal domain M0M60_00390 PF17391 Urocanase N-terminal domain M0M60_00395 PF00221 Aromatic amino acid lyase M0M60_00400 PF00324 Amino acid permease M0M60_00405 PF12146 Serine aminopeptidase, S33 M0M60_00410 PF08019 Phosphoethanolamine transferase EptA/EptB M0M60_00410 PF00884 Sulfatase M0M60_00415 PF00196 Bacterial regulatory proteins, luxR family M0M60_00415 PF00072 Response regulator receiver domain M0M60_00420 PF05231 MASE1 M0M60_00420 PF07730 Histidine kinase M0M60_00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_00425 PF07690 Major Facilitator Superfamily M0M60_00435 PF13332 Hemagglutinin repeat M0M60_00435 PF05860 haemagglutination activity domain M0M60_00435 PF04829 Pre-toxin domain with VENN motif M0M60_00435 PF05594 Haemagluttinin repeat M0M60_00440 PF08479 POTRA domain, ShlB-type M0M60_00440 PF17287 POTRA domain M0M60_00440 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0M60_00445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_00455 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_00455 PF12911 N-terminal TM domain of oligopeptide transport permease C M0M60_00460 PF00005 ABC transporter M0M60_00460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_00465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_00465 PF00005 ABC transporter M0M60_00475 PF00672 HAMP domain M0M60_00475 PF00990 Diguanylate cyclase, GGDEF domain M0M60_00475 PF17154 Gammaproteobacterial periplasmic sensor domain M0M60_00475 PF00563 EAL domain M0M60_00480 PF06178 Oligogalacturonate-specific porin protein (KdgM) M0M60_00485 PF06917 Periplasmic pectate lyase M0M60_00495 PF00375 Sodium:dicarboxylate symporter family M0M60_00500 PF00675 Insulinase (Peptidase family M16) M0M60_00500 PF05193 Peptidase M16 inactive domain M0M60_00505 PF00294 pfkB family carbohydrate kinase M0M60_00510 PF01361 Tautomerase enzyme M0M60_00515 PF00563 EAL domain M0M60_00520 PF05170 AsmA family M0M60_00525 PF02611 CDP-diacylglycerol pyrophosphatase M0M60_00530 PF03631 Virulence factor BrkB M0M60_00555 PF02595 Glycerate kinase family M0M60_00560 PF02447 GntP family permease M0M60_00570 PF17853 GGDEF-like domain M0M60_00570 PF05651 Putative sugar diacid recognition M0M60_00570 PF13556 PucR C-terminal helix-turn-helix domain M0M60_00575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0M60_00575 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_00580 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M0M60_00585 PF01432 Peptidase family M3 M0M60_00590 PF04445 Putative SAM-dependent methyltransferase M0M60_00595 PF00413 Matrixin M0M60_00595 PF08548 Peptidase M10 serralysin C terminal M0M60_00595 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) M0M60_00600 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M0M60_00600 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M0M60_00605 PF00582 Universal stress protein family M0M60_00610 PF10625 Universal stress protein B (UspB) M0M60_00615 PF01797 Transposase IS200 like M0M60_00620 PF01384 Phosphate transporter family M0M60_00630 PF13188 PAS domain M0M60_00630 PF08448 PAS fold M0M60_00630 PF00072 Response regulator receiver domain M0M60_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_00630 PF00512 His Kinase A (phospho-acceptor) domain M0M60_00635 PF00005 ABC transporter M0M60_00640 PF02653 Branched-chain amino acid transport system / permease component M0M60_00645 PF13407 Periplasmic binding protein domain M0M60_00655 PF01116 Fructose-bisphosphate aldolase class-II M0M60_00665 PF00072 Response regulator receiver domain M0M60_00665 PF00486 Transcriptional regulatory protein, C terminal M0M60_00675 PF17954 Quercetinase C-terminal cupin domain M0M60_00675 PF02678 Pirin M0M60_00680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M0M60_00680 PF00356 Bacterial regulatory proteins, lacI family M0M60_00685 PF02447 GntP family permease M0M60_00690 PF01202 Shikimate kinase M0M60_00710 PF01914 MarC family integral membrane protein M0M60_00715 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0M60_00715 PF02774 Semialdehyde dehydrogenase, dimerisation domain M0M60_00740 PF09134 Invasin, domain 3 M0M60_00740 PF11924 Inverse autotransporter, beta-domain M0M60_00740 PF02369 Bacterial Ig-like domain (group 1) M0M60_00740 PF07979 Intimin C-type lectin domain M0M60_00745 PF06580 Histidine kinase M0M60_00745 PF07694 5TMR of 5TMR-LYT M0M60_00750 PF02806 Alpha amylase, C-terminal all-beta domain M0M60_00750 PF00128 Alpha amylase, catalytic domain M0M60_00750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0M60_00755 PF00128 Alpha amylase, catalytic domain M0M60_00755 PF18390 Glycogen debranching enzyme C-terminal domain M0M60_00755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M0M60_00760 PF00483 Nucleotidyl transferase M0M60_00765 PF08323 Starch synthase catalytic domain M0M60_00765 PF00534 Glycosyl transferases group 1 M0M60_00770 PF00343 Carbohydrate phosphorylase M0M60_00775 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M0M60_00775 PF01266 FAD dependent oxidoreductase M0M60_00795 PF00665 Integrase core domain M0M60_00795 PF02796 Helix-turn-helix domain of resolvase M0M60_00800 PF01695 IstB-like ATP binding protein M0M60_00810 PF00311 Phosphoenolpyruvate carboxylase M0M60_00815 PF07687 Peptidase dimerisation domain M0M60_00815 PF01546 Peptidase family M20/M25/M40 M0M60_00820 PF02774 Semialdehyde dehydrogenase, dimerisation domain M0M60_00820 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0M60_00825 PF00696 Amino acid kinase family M0M60_00830 PF00206 Lyase M0M60_00830 PF14698 Argininosuccinate lyase C-terminal M0M60_00835 PF07715 TonB-dependent Receptor Plug Domain M0M60_00835 PF00593 TonB dependent receptor M0M60_00845 PF00664 ABC transporter transmembrane region M0M60_00845 PF00005 ABC transporter M0M60_00850 PF00529 HlyD membrane-fusion protein of T1SS M0M60_00855 PF03544 Gram-negative bacterial TonB protein C-terminal M0M60_00860 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_00860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0M60_00865 PF08534 Redoxin M0M60_00865 PF00462 Glutaredoxin M0M60_00870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_00870 PF03466 LysR substrate binding domain M0M60_00875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0M60_00875 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_00880 PF00440 Bacterial regulatory proteins, tetR family M0M60_00885 PF07226 Protein of unknown function (DUF1422) M0M60_00890 PF05958 tRNA (Uracil-5-)-methyltransferase M0M60_00895 PF00593 TonB dependent receptor M0M60_00895 PF07715 TonB-dependent Receptor Plug Domain M0M60_00900 PF01177 Asp/Glu/Hydantoin racemase M0M60_00935 PF13407 Periplasmic binding protein domain M0M60_00940 PF00005 ABC transporter M0M60_00945 PF02653 Branched-chain amino acid transport system / permease component M0M60_00950 PF02653 Branched-chain amino acid transport system / permease component M0M60_00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_00955 PF03466 LysR substrate binding domain M0M60_00960 PF04219 Protein of unknown function, DUF M0M60_00965 PF01078 Magnesium chelatase, subunit ChlI M0M60_00965 PF13335 Magnesium chelatase, subunit ChlI C-terminal M0M60_00970 PF08046 IlvGEDA operon leader peptide M0M60_00975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0M60_00975 PF00205 Thiamine pyrophosphate enzyme, central domain M0M60_00975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0M60_00985 PF01063 Amino-transferase class IV M0M60_00990 PF00920 Dehydratase family M0M60_00995 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_00995 PF00585 C-terminal regulatory domain of Threonine dehydratase M0M60_01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_01030 PF03466 LysR substrate binding domain M0M60_01035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M0M60_01035 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M0M60_01060 PF01320 Colicin immunity protein / pyocin immunity protein M0M60_01065 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_01065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_01075 PF13953 PapC C-terminal domain M0M60_01075 PF13954 PapC N-terminal domain M0M60_01075 PF00577 Outer membrane usher protein M0M60_01080 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_01080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_01090 PF00872 Transposase, Mutator family M0M60_01110 PF13361 UvrD-like helicase C-terminal domain M0M60_01110 PF00580 UvrD/REP helicase N-terminal domain M0M60_01120 PF00271 Helicase conserved C-terminal domain M0M60_01120 PF00270 DEAD/DEAH box helicase M0M60_01125 PF00085 Thioredoxin M0M60_01130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0M60_01130 PF07498 Rho termination factor, N-terminal domain M0M60_01130 PF07497 Rho termination factor, RNA-binding domain M0M60_01135 PF00953 Glycosyl transferase family 4 M0M60_01140 PF02706 Chain length determinant protein M0M60_01145 PF02350 UDP-N-acetylglucosamine 2-epimerase M0M60_01150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0M60_01150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0M60_01150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0M60_01155 PF16363 GDP-mannose 4,6 dehydratase M0M60_01160 PF00483 Nucleotidyl transferase M0M60_01170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0M60_01175 PF01943 Polysaccharide biosynthesis protein M0M60_01180 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 M0M60_01185 PF06899 WzyE protein, O-antigen assembly polymerase M0M60_01190 PF03808 Glycosyl transferase WecB/TagA/CpsF family M0M60_01195 PF00324 Amino acid permease M0M60_01220 PF01797 Transposase IS200 like M0M60_01225 PF07719 Tetratricopeptide repeat M0M60_01225 PF07219 HemY protein N-terminus M0M60_01230 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M0M60_01235 PF02602 Uroporphyrinogen-III synthase HemD M0M60_01240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M0M60_01240 PF03900 Porphobilinogen deaminase, C-terminal domain M0M60_01250 PF01295 Adenylate cyclase, class-I M0M60_01250 PF12633 Adenylate cyclase NT domain M0M60_01255 PF01491 Frataxin-like domain M0M60_01260 PF13627 Prokaryotic lipoprotein-attachment site M0M60_01265 PF01678 Diaminopimelate epimerase M0M60_01270 PF04340 Protein of unknown function, DUF484 M0M60_01275 PF02899 Phage integrase, N-terminal SAM-like domain M0M60_01275 PF00589 Phage integrase family M0M60_01280 PF13419 Haloacid dehalogenase-like hydrolase M0M60_01285 PF00580 UvrD/REP helicase N-terminal domain M0M60_01285 PF13361 UvrD-like helicase C-terminal domain M0M60_01300 PF09370 Phosphoenolpyruvate hydrolase-like M0M60_01305 PF01544 CorA-like Mg2+ transporter protein M0M60_01310 PF00892 EamA-like transporter family M0M60_01315 PF03061 Thioesterase superfamily M0M60_01320 PF02253 Phospholipase A1 M0M60_01325 PF00270 DEAD/DEAH box helicase M0M60_01325 PF00271 Helicase conserved C-terminal domain M0M60_01325 PF00570 HRDC domain M0M60_01325 PF16124 RecQ zinc-binding M0M60_01325 PF09382 RQC domain M0M60_01330 PF01810 LysE type translocator M0M60_01335 PF01810 LysE type translocator M0M60_01340 PF12146 Serine aminopeptidase, S33 M0M60_01355 PF03009 Glycerophosphoryl diester phosphodiesterase family M0M60_01365 PF01266 FAD dependent oxidoreductase M0M60_01365 PF04324 BFD-like [2Fe-2S] binding domain M0M60_01370 PF00890 FAD binding domain M0M60_01375 PF02754 Cysteine-rich domain M0M60_01375 PF13183 4Fe-4S dicluster domain M0M60_01380 PF08786 DcrB M0M60_01385 PF02592 Putative vitamin uptake transporter M0M60_01390 PF01206 Sulfurtransferase TusA M0M60_01395 PF00403 Heavy-metal-associated domain M0M60_01400 PF07947 YhhN family M0M60_01415 PF06611 Protein of unknown function (DUF1145) M0M60_01425 PF02881 SRP54-type protein, helical bundle domain M0M60_01425 PF00448 SRP54-type protein, GTPase domain M0M60_01425 PF00448 SRP54-type protein, GTPase domain M0M60_01425 PF02881 SRP54-type protein, helical bundle domain M0M60_01430 PF00005 ABC transporter M0M60_01435 PF02687 FtsX-like permease family M0M60_01435 PF18075 FtsX extracellular domain M0M60_01440 PF00140 Sigma-70 factor, region 1.2 M0M60_01440 PF04542 Sigma-70 region 2 M0M60_01440 PF04545 Sigma-70, region 4 M0M60_01445 PF01797 Transposase IS200 like M0M60_01450 PF12568 Acetyltransferase (GNAT) domain, PanZ M0M60_01455 PF13458 Periplasmic binding protein M0M60_01460 PF02653 Branched-chain amino acid transport system / permease component M0M60_01465 PF11862 Domain of unknown function (DUF3382) M0M60_01465 PF02653 Branched-chain amino acid transport system / permease component M0M60_01470 PF00005 ABC transporter M0M60_01470 PF12399 Branched-chain amino acid ATP-binding cassette transporter M0M60_01475 PF00005 ABC transporter M0M60_01515 PF13416 Bacterial extracellular solute-binding protein M0M60_01520 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_01525 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_01530 PF00005 ABC transporter M0M60_01530 PF17912 MalK OB fold domain M0M60_01535 PF03009 Glycerophosphoryl diester phosphodiesterase family M0M60_01540 PF03547 Membrane transport protein M0M60_01545 PF00892 EamA-like transporter family M0M60_01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_01550 PF03466 LysR substrate binding domain M0M60_01555 PF08267 Cobalamin-independent synthase, N-terminal domain M0M60_01555 PF01717 Cobalamin-independent synthase, Catalytic domain M0M60_01560 PF01738 Dienelactone hydrolase family M0M60_01565 PF01048 Phosphorylase superfamily M0M60_01575 PF02554 Carbon starvation protein CstA M0M60_01575 PF13722 5TM C-terminal transporter carbon starvation CstA M0M60_01580 PF09335 SNARE associated Golgi protein M0M60_01585 PF02646 RmuC family M0M60_01590 PF01209 ubiE/COQ5 methyltransferase family M0M60_01595 PF02036 SCP-2 sterol transfer family M0M60_01600 PF03109 ABC1 family M0M60_01605 PF02416 mttA/Hcf106 family M0M60_01615 PF00902 Sec-independent protein translocase protein (TatC) M0M60_01625 PF02796 Helix-turn-helix domain of resolvase M0M60_01625 PF00665 Integrase core domain M0M60_01630 PF01695 IstB-like ATP binding protein M0M60_01635 PF01026 TatD related DNase M0M60_01640 PF00490 Delta-aminolevulinic acid dehydratase M0M60_01645 PF02357 Transcription termination factor nusG M0M60_01650 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M0M60_01655 PF00970 Oxidoreductase FAD-binding domain M0M60_01655 PF00175 Oxidoreductase NAD-binding domain M0M60_01660 PF02803 Thiolase, C-terminal domain M0M60_01660 PF00108 Thiolase, N-terminal domain M0M60_01665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0M60_01665 PF00378 Enoyl-CoA hydratase/isomerase M0M60_01665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0M60_01670 PF00557 Metallopeptidase family M24 M0M60_01675 PF09186 Domain of unknown function (DUF1949) M0M60_01675 PF01205 Uncharacterized protein family UPF0029 M0M60_01680 PF01797 Transposase IS200 like M0M60_01690 PF02386 Cation transport protein M0M60_01695 PF12724 Flavodoxin domain M0M60_01725 PF01565 FAD binding domain M0M60_01725 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M0M60_01730 PF02237 Biotin protein ligase C terminal domain M0M60_01730 PF03099 Biotin/lipoate A/B protein ligase family M0M60_01730 PF08279 HTH domain M0M60_01735 PF00485 Phosphoribulokinase / Uridine kinase family M0M60_01740 PF13673 Acetyltransferase (GNAT) domain M0M60_01745 PF00665 Integrase core domain M0M60_01745 PF02796 Helix-turn-helix domain of resolvase M0M60_01750 PF01695 IstB-like ATP binding protein M0M60_01775 PF03144 Elongation factor Tu domain 2 M0M60_01775 PF00009 Elongation factor Tu GTP binding domain M0M60_01775 PF03143 Elongation factor Tu C-terminal domain M0M60_01780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M0M60_01785 PF00467 KOW motif M0M60_01785 PF02357 Transcription termination factor nusG M0M60_01790 PF00298 Ribosomal protein L11, RNA binding domain M0M60_01790 PF03946 Ribosomal protein L11, N-terminal domain M0M60_01795 PF00687 Ribosomal protein L1p/L10e family M0M60_01800 PF00466 Ribosomal protein L10 M0M60_01805 PF00542 Ribosomal protein L7/L12 C-terminal domain M0M60_01805 PF16320 Ribosomal protein L7/L12 dimerisation domain M0M60_01810 PF00562 RNA polymerase Rpb2, domain 6 M0M60_01810 PF10385 RNA polymerase beta subunit external 1 domain M0M60_01810 PF04565 RNA polymerase Rpb2, domain 3 M0M60_01810 PF04561 RNA polymerase Rpb2, domain 2 M0M60_01810 PF04563 RNA polymerase beta subunit M0M60_01810 PF04560 RNA polymerase Rpb2, domain 7 M0M60_01815 PF04997 RNA polymerase Rpb1, domain 1 M0M60_01815 PF00623 RNA polymerase Rpb1, domain 2 M0M60_01815 PF04983 RNA polymerase Rpb1, domain 3 M0M60_01815 PF05000 RNA polymerase Rpb1, domain 4 M0M60_01815 PF04998 RNA polymerase Rpb1, domain 5 M0M60_01820 PF01797 Transposase IS200 like M0M60_01825 PF06968 Biotin and Thiamin Synthesis associated domain M0M60_01825 PF04055 Radical SAM superfamily M0M60_01830 PF05690 Thiazole biosynthesis protein ThiG M0M60_01840 PF00899 ThiF family M0M60_01845 PF02581 Thiamine monophosphate synthase M0M60_01850 PF01964 Radical SAM ThiC family M0M60_01850 PF13667 ThiC-associated domain M0M60_01855 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M0M60_01860 PF00293 NUDIX domain M0M60_01860 PF09297 NADH pyrophosphatase zinc ribbon domain M0M60_01870 PF01208 Uroporphyrinogen decarboxylase (URO-D) M0M60_01875 PF04493 Endonuclease V M0M60_01880 PF04222 Protein of unknown function (DUF416) M0M60_01885 PF00216 Bacterial DNA-binding protein M0M60_01890 PF07356 Protein of unknown function (DUF1481) M0M60_01895 PF02843 Phosphoribosylglycinamide synthetase, C domain M0M60_01895 PF02844 Phosphoribosylglycinamide synthetase, N domain M0M60_01895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M0M60_01900 PF02142 MGS-like domain M0M60_01900 PF01808 AICARFT/IMPCHase bienzyme M0M60_01940 PF04204 Homoserine O-succinyltransferase M0M60_01945 PF01274 Malate synthase M0M60_01950 PF00463 Isocitrate lyase family M0M60_01955 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M0M60_01965 PF02607 B12 binding domain M0M60_01965 PF02965 Vitamin B12 dependent methionine synthase, activation domain M0M60_01965 PF00809 Pterin binding enzyme M0M60_01965 PF02574 Homocysteine S-methyltransferase M0M60_01965 PF02310 B12 binding domain M0M60_01970 PF05860 haemagglutination activity domain M0M60_01970 PF13332 Hemagglutinin repeat M0M60_01975 PF17287 POTRA domain M0M60_01975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0M60_01975 PF08479 POTRA domain, ShlB-type M0M60_01980 PF01842 ACT domain M0M60_01980 PF00696 Amino acid kinase family M0M60_01985 PF00342 Phosphoglucose isomerase M0M60_01990 PF06146 Phosphate-starvation-inducible E M0M60_01995 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_02000 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_02000 PF14785 Maltose transport system permease protein MalF P2 domain M0M60_02005 PF01547 Bacterial extracellular solute-binding protein M0M60_02015 PF17912 MalK OB fold domain M0M60_02015 PF00005 ABC transporter M0M60_02020 PF02264 LamB porin M0M60_02025 PF07148 Maltose operon periplasmic protein precursor (MalM) M0M60_02035 PF05638 Type VI secretion system effector, Hcp M0M60_02045 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0M60_02055 PF05947 Type VI secretion system, TssF M0M60_02065 PF05947 Type VI secretion system, TssF M0M60_02085 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M0M60_02095 PF17871 AAA lid domain M0M60_02095 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_02095 PF07724 AAA domain (Cdc48 subfamily) M0M60_02095 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_02130 PF04717 Type VI secretion system, phage-baseplate injector M0M60_02145 PF05593 RHS Repeat M0M60_02145 PF03527 RHS protein M0M60_02175 PF04717 Type VI secretion system, phage-baseplate injector M0M60_02185 PF05593 RHS Repeat M0M60_02185 PF03527 RHS protein M0M60_02205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0M60_02205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0M60_02210 PF02311 AraC-like ligand binding domain M0M60_02210 PF12833 Helix-turn-helix domain M0M60_02215 PF05025 RbsD / FucU transport protein family M0M60_02220 PF00294 pfkB family carbohydrate kinase M0M60_02225 PF01791 DeoC/LacD family aldolase M0M60_02230 PF03358 NADPH-dependent FMN reductase M0M60_02235 PF09084 NMT1/THI5 like M0M60_02240 PF00296 Luciferase-like monooxygenase M0M60_02245 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_02250 PF00005 ABC transporter M0M60_02265 PF04221 RelB antitoxin M0M60_02270 PF00860 Permease family M0M60_02275 PF00999 Sodium/hydrogen exchanger family M0M60_02285 PF03279 Bacterial lipid A biosynthesis acyltransferase M0M60_02295 PF00005 ABC transporter M0M60_02300 PF02653 Branched-chain amino acid transport system / permease component M0M60_02310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_02310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_02315 PF00571 CBS domain M0M60_02315 PF01380 SIS domain M0M60_02320 PF02798 Glutathione S-transferase, N-terminal domain M0M60_02335 PF01797 Transposase IS200 like M0M60_02340 PF00313 'Cold-shock' DNA-binding domain M0M60_02345 PF00313 'Cold-shock' DNA-binding domain M0M60_02350 PF05433 Glycine zipper 2TM domain M0M60_02355 PF00753 Metallo-beta-lactamase superfamily M0M60_02360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0M60_02360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M0M60_02365 PF02627 Carboxymuconolactone decarboxylase family M0M60_02370 PF07690 Major Facilitator Superfamily M0M60_02395 PF02954 Bacterial regulatory protein, Fis family M0M60_02400 PF01207 Dihydrouridine synthase (Dus) M0M60_02410 PF00474 Sodium:solute symporter family M0M60_02415 PF06196 Protein of unknown function (DUF997) M0M60_02425 PF02785 Biotin carboxylase C-terminal domain M0M60_02425 PF00289 Biotin carboxylase, N-terminal domain M0M60_02425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0M60_02430 PF00364 Biotin-requiring enzyme M0M60_02435 PF01220 Dehydroquinase class II M0M60_02440 PF01794 Ferric reductase like transmembrane component M0M60_02445 PF00174 Oxidoreductase molybdopterin binding domain M0M60_02450 PF00107 Zinc-binding dehydrogenase M0M60_02450 PF08240 Alcohol dehydrogenase GroES-like domain M0M60_02455 PF00563 EAL domain M0M60_02455 PF17157 Gammaproteobacterial periplasmic sensor domain M0M60_02455 PF00990 Diguanylate cyclase, GGDEF domain M0M60_02465 PF04085 rod shape-determining protein MreC M0M60_02470 PF04093 rod shape-determining protein MreD M0M60_02475 PF02545 Maf-like protein M0M60_02480 PF10150 Ribonuclease E/G family M0M60_02480 PF00575 S1 RNA binding domain M0M60_02485 PF13116 Protein of unknown function M0M60_02485 PF13502 AsmA-like C-terminal region M0M60_02490 PF00795 Carbon-nitrogen hydrolase M0M60_02495 PF01523 Putative modulator of DNA gyrase M0M60_02500 PF18807 Tripartite Tc toxins repeat M0M60_02500 PF14431 YwqJ-like deaminase M0M60_02505 PF05785 Rho-activating domain of cytotoxic necrotizing factor M0M60_02505 PF18807 Tripartite Tc toxins repeat M0M60_02530 PF03534 Salmonella virulence plasmid 65kDa B protein M0M60_02530 PF12255 Insecticide toxin TcdB middle/C-terminal region M0M60_02530 PF12256 Insecticide toxin TcdB middle/N-terminal region M0M60_02535 PF18413 Neuraminidase-like domain M0M60_02535 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain M0M60_02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_02550 PF03466 LysR substrate binding domain M0M60_02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_02555 PF03466 LysR substrate binding domain M0M60_02560 PF07869 Protein of unknown function (DUF1656) M0M60_02565 PF13533 Biotin-lipoyl like M0M60_02570 PF04632 Fusaric acid resistance protein family M0M60_02585 PF01337 Barstar (barnase inhibitor) M0M60_02590 PF04751 Protein of unknown function (DUF615) M0M60_02595 PF01523 Putative modulator of DNA gyrase M0M60_02605 PF07361 Cytochrome b562 M0M60_02610 PF01272 Transcription elongation factor, GreA/GreB, C-term M0M60_02610 PF14760 Rnk N-terminus M0M60_02615 PF11941 Domain of unknown function (DUF3459) M0M60_02615 PF00128 Alpha amylase, catalytic domain M0M60_02620 PF02378 Phosphotransferase system, EIIC M0M60_02620 PF00367 phosphotransferase system, EIIB M0M60_02625 PF00356 Bacterial regulatory proteins, lacI family M0M60_02635 PF01695 IstB-like ATP binding protein M0M60_02640 PF02796 Helix-turn-helix domain of resolvase M0M60_02640 PF00665 Integrase core domain M0M60_02645 PF01797 Transposase IS200 like M0M60_02650 PF03884 DNA gyrase inhibitor YacG M0M60_02655 PF07072 Cell division protein M0M60_02660 PF01121 Dephospho-CoA kinase M0M60_02670 PF00478 IMP dehydrogenase / GMP reductase domain M0M60_02675 PF00482 Type II secretion system (T2SS), protein F M0M60_02680 PF00437 Type II/IV secretion system protein M0M60_02680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M0M60_02685 PF07963 Prokaryotic N-terminal methylation motif M0M60_02690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M0M60_02690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M0M60_02695 PF01510 N-acetylmuramoyl-L-alanine amidase M0M60_02700 PF17113 Regulatory signalling modulator protein AmpE M0M60_02705 PF00324 Amino acid permease M0M60_02710 PF00392 Bacterial regulatory proteins, gntR family M0M60_02710 PF07729 FCD domain M0M60_02715 PF17831 Pyruvate dehydrogenase E1 component middle domain M0M60_02715 PF00456 Transketolase, thiamine diphosphate binding domain M0M60_02720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0M60_02720 PF00364 Biotin-requiring enzyme M0M60_02720 PF02817 e3 binding domain M0M60_02725 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_02725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0M60_02730 PF01797 Transposase IS200 like M0M60_02735 PF06434 Aconitate hydratase 2 N-terminus M0M60_02735 PF00330 Aconitase family (aconitate hydratase) M0M60_02735 PF11791 Aconitate B N-terminal domain M0M60_02740 PF06062 Uncharacterised protein family (UPF0231) M0M60_02745 PF00892 EamA-like transporter family M0M60_02750 PF02675 S-adenosylmethionine decarboxylase M0M60_02755 PF17284 Spermidine synthase tetramerisation domain M0M60_02760 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) M0M60_02765 PF07732 Multicopper oxidase M0M60_02765 PF10518 TAT (twin-arginine translocation) pathway signal sequence M0M60_02765 PF00394 Multicopper oxidase M0M60_02765 PF07731 Multicopper oxidase M0M60_02770 PF00156 Phosphoribosyl transferase domain M0M60_02775 PF00484 Carbonic anhydrase M0M60_02780 PF00005 ABC transporter M0M60_02785 PF01061 ABC-2 type transporter M0M60_02790 PF01522 Polysaccharide deacetylase M0M60_02795 PF02261 Aspartate decarboxylase M0M60_02800 PF02569 Pantoate-beta-alanine ligase M0M60_02805 PF02548 Ketopantoate hydroxymethyltransferase M0M60_02810 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M0M60_02815 PF01743 Poly A polymerase head domain M0M60_02815 PF12626 Polymerase A arginine-rich C-terminus M0M60_02815 PF12627 Probable RNA and SrmB- binding site of polymerase A M0M60_02820 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0M60_02825 PF01258 Prokaryotic dksA/traR C4-type zinc finger M0M60_02830 PF03749 Sugar fermentation stimulation protein RE domain M0M60_02830 PF17746 SfsA N-terminal OB domain M0M60_02835 PF02834 LigT like Phosphoesterase M0M60_02840 PF00270 DEAD/DEAH box helicase M0M60_02840 PF04408 Helicase associated domain (HA2) M0M60_02840 PF00271 Helicase conserved C-terminal domain M0M60_02840 PF08482 ATP-dependent helicase C-terminal M0M60_02845 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal M0M60_02845 PF00912 Transglycosylase M0M60_02845 PF00905 Penicillin binding protein transpeptidase domain M0M60_02845 PF14814 Bifunctional transglycosylase second domain M0M60_02850 PF00005 ABC transporter M0M60_02860 PF01497 Periplasmic binding protein M0M60_02865 PF01032 FecCD transport family M0M60_02870 PF00202 Aminotransferase class-III M0M60_02875 PF00654 Voltage gated chloride channel M0M60_02880 PF01521 Iron-sulphur cluster biosynthesis M0M60_02885 PF03458 UPF0126 domain M0M60_02890 PF01497 Periplasmic binding protein M0M60_02895 PF01048 Phosphorylase superfamily M0M60_02900 PF13286 Phosphohydrolase-associated domain M0M60_02900 PF01966 HD domain M0M60_02905 PF00595 PDZ domain M0M60_02910 PF00672 HAMP domain M0M60_02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_02910 PF00512 His Kinase A (phospho-acceptor) domain M0M60_02910 PF01627 Hpt domain M0M60_02910 PF00072 Response regulator receiver domain M0M60_02910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0M60_02920 PF05958 tRNA (Uracil-5-)-methyltransferase M0M60_02920 PF01938 TRAM domain M0M60_02925 PF02824 TGS domain M0M60_02925 PF04607 Region found in RelA / SpoT proteins M0M60_02925 PF13291 ACT domain M0M60_02930 PF03819 MazG nucleotide pyrophosphohydrolase domain M0M60_02935 PF06418 CTP synthase N-terminus M0M60_02935 PF00117 Glutamine amidotransferase class-I M0M60_02940 PF00113 Enolase, C-terminal TIM barrel domain M0M60_02940 PF03952 Enolase, N-terminal domain M0M60_02945 PF00080 Copper/zinc superoxide dismutase (SODC) M0M60_02950 PF04055 Radical SAM superfamily M0M60_02955 PF01242 6-pyruvoyl tetrahydropterin synthase M0M60_02960 PF00667 FAD binding domain M0M60_02960 PF00258 Flavodoxin M0M60_02960 PF00175 Oxidoreductase NAD-binding domain M0M60_02965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0M60_02965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0M60_02995 PF10414 Sirohaem synthase dimerisation region M0M60_02995 PF14824 Sirohaem biosynthesis protein central M0M60_02995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0M60_03000 PF01507 Phosphoadenosine phosphosulfate reductase family M0M60_03005 PF00009 Elongation factor Tu GTP binding domain M0M60_03015 PF12084 Protein of unknown function (DUF3561) M0M60_03020 PF04977 Septum formation initiator M0M60_03025 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M0M60_03030 PF02542 YgbB family M0M60_03035 PF01142 tRNA pseudouridine synthase D (TruD) M0M60_03040 PF01975 Survival protein SurE M0M60_03050 PF01551 Peptidase family M23 M0M60_03050 PF01476 LysM domain M0M60_03055 PF04539 Sigma-70 region 3 M0M60_03055 PF04542 Sigma-70 region 2 M0M60_03055 PF00140 Sigma-70 factor, region 1.2 M0M60_03055 PF04545 Sigma-70, region 4 M0M60_03060 PF00488 MutS domain V M0M60_03060 PF05190 MutS family domain IV M0M60_03060 PF05192 MutS domain III M0M60_03060 PF05188 MutS domain II M0M60_03060 PF01624 MutS domain I M0M60_03065 PF02502 Ribose/Galactose Isomerase M0M60_03070 PF08240 Alcohol dehydrogenase GroES-like domain M0M60_03070 PF00107 Zinc-binding dehydrogenase M0M60_03080 PF02733 Dak1 domain M0M60_03085 PF02734 DAK2 domain M0M60_03090 PF04198 Putative sugar-binding domain M0M60_03090 PF13936 Helix-turn-helix domain M0M60_03095 PF02040 Arsenical pump membrane protein M0M60_03100 PF01022 Bacterial regulatory protein, arsR family M0M60_03115 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_03120 PF00034 Cytochrome c M0M60_03120 PF03150 Di-haem cytochrome c peroxidase M0M60_03120 PF14376 Haem-binding domain M0M60_03140 PF00557 Metallopeptidase family M24 M0M60_03150 PF05683 Fumarase C-terminus M0M60_03150 PF05681 Fumarate hydratase (Fumerase) M0M60_03155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_03155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_03160 PF01261 Xylose isomerase-like TIM barrel M0M60_03165 PF02653 Branched-chain amino acid transport system / permease component M0M60_03170 PF02653 Branched-chain amino acid transport system / permease component M0M60_03175 PF00005 ABC transporter M0M60_03180 PF01797 Transposase IS200 like M0M60_03190 PF00455 DeoR C terminal sensor domain M0M60_03190 PF08220 DeoR-like helix-turn-helix domain M0M60_03195 PF00596 Class II Aldolase and Adducin N-terminal domain M0M60_03200 PF01568 Molydopterin dinucleotide binding domain M0M60_03200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0M60_03200 PF00384 Molybdopterin oxidoreductase M0M60_03205 PF12800 4Fe-4S binding domain M0M60_03205 PF13247 4Fe-4S dicluster domain M0M60_03210 PF04976 DMSO reductase anchor subunit (DmsC) M0M60_03215 PF02613 Nitrate reductase delta subunit M0M60_03220 PF01292 Prokaryotic cytochrome b561 M0M60_03225 PF07361 Cytochrome b562 M0M60_03230 PF00141 Peroxidase M0M60_03235 PF13407 Periplasmic binding protein domain M0M60_03245 PF00005 ABC transporter M0M60_03250 PF02653 Branched-chain amino acid transport system / permease component M0M60_03255 PF00456 Transketolase, thiamine diphosphate binding domain M0M60_03260 PF02780 Transketolase, C-terminal domain M0M60_03260 PF02779 Transketolase, pyrimidine binding domain M0M60_03265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_03265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_03280 PF07690 Major Facilitator Superfamily M0M60_03285 PF02464 Competence-damaged protein M0M60_03290 PF00154 recA bacterial DNA recombination protein M0M60_03295 PF02631 RecX family M0M60_03300 PF02272 DHHA1 domain M0M60_03300 PF01411 tRNA synthetases class II (A) M0M60_03300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0M60_03305 PF02599 Global regulator protein family M0M60_03310 PF00872 Transposase, Mutator family M0M60_03345 PF13419 Haloacid dehalogenase-like hydrolase M0M60_03350 PF09335 SNARE associated Golgi protein M0M60_03355 PF04262 Glutamate-cysteine ligase M0M60_03360 PF02664 S-Ribosylhomocysteinase (LuxS) M0M60_03365 PF01797 Transposase IS200 like M0M60_03370 PF01797 Transposase IS200 like M0M60_03375 PF00571 CBS domain M0M60_03375 PF03471 Transporter associated domain M0M60_03375 PF01595 Cyclin M transmembrane N-terminal domain M0M60_03380 PF01578 Cytochrome C assembly protein M0M60_03385 PF00448 SRP54-type protein, GTPase domain M0M60_03385 PF02978 Signal peptide binding domain M0M60_03385 PF02881 SRP54-type protein, helical bundle domain M0M60_03390 PF00886 Ribosomal protein S16 M0M60_03395 PF05239 PRC-barrel domain M0M60_03395 PF01782 RimM N-terminal domain M0M60_03400 PF01746 tRNA (Guanine-1)-methyltransferase M0M60_03405 PF01245 Ribosomal protein L19 M0M60_03410 PF01797 Transposase IS200 like M0M60_03415 PF04338 Protein of unknown function, DUF481 M0M60_03425 PF00072 Response regulator receiver domain M0M60_03425 PF04397 LytTr DNA-binding domain M0M60_03430 PF00793 DAHP synthetase I family M0M60_03435 PF01817 Chorismate mutase type II M0M60_03435 PF02153 Prephenate dehydrogenase M0M60_03440 PF01817 Chorismate mutase type II M0M60_03440 PF00800 Prephenate dehydratase M0M60_03445 PF01695 IstB-like ATP binding protein M0M60_03450 PF00665 Integrase core domain M0M60_03450 PF02796 Helix-turn-helix domain of resolvase M0M60_03455 PF00326 Prolyl oligopeptidase family M0M60_03460 PF01250 Ribosomal protein S6 M0M60_03465 PF00436 Single-strand binding protein family M0M60_03470 PF01084 Ribosomal protein S18 M0M60_03475 PF03948 Ribosomal protein L9, C-terminal domain M0M60_03475 PF01281 Ribosomal protein L9, N-terminal domain M0M60_03480 PF01797 Transposase IS200 like M0M60_03490 PF04225 Opacity-associated protein A LysM-like domain M0M60_03490 PF08525 Opacity-associated protein A N-terminal motif M0M60_03495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0M60_03495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0M60_03500 PF01814 Hemerythrin HHE cation binding domain M0M60_03500 PF04405 Domain of Unknown function (DUF542) M0M60_03505 PF02872 5'-nucleotidase, C-terminal domain M0M60_03505 PF00149 Calcineurin-like phosphoesterase M0M60_03510 PF00459 Inositol monophosphatase family M0M60_03515 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M0M60_03520 PF06526 Protein of unknown function (DUF1107) M0M60_03525 PF00571 CBS domain M0M60_03525 PF03471 Transporter associated domain M0M60_03525 PF01595 Cyclin M transmembrane N-terminal domain M0M60_03530 PF01625 Peptide methionine sulfoxide reductase M0M60_03535 PF01103 Surface antigen M0M60_03535 PF07244 Surface antigen variable number repeat M0M60_03535 PF17243 POTRA domain TamA domain 1 M0M60_03540 PF04357 TamB, inner membrane protein subunit of TAM complex M0M60_03545 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like M0M60_03550 PF00719 Inorganic pyrophosphatase M0M60_03555 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M0M60_03560 PF01225 Mur ligase family, catalytic domain M0M60_03560 PF02875 Mur ligase family, glutamate ligase domain M0M60_03560 PF08245 Mur ligase middle domain M0M60_03570 PF02863 Arginine repressor, C-terminal domain M0M60_03570 PF01316 Arginine repressor, DNA binding domain M0M60_03575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M0M60_03575 PF00056 lactate/malate dehydrogenase, NAD binding domain M0M60_03580 PF13693 Winged helix-turn-helix DNA-binding M0M60_03590 PF00348 Polyprenyl synthetase M0M60_03595 PF00829 Ribosomal prokaryotic L21 protein M0M60_03600 PF01016 Ribosomal L27 protein M0M60_03605 PF00892 EamA-like transporter family M0M60_03610 PF01018 GTP1/OBG M0M60_03610 PF01926 50S ribosome-binding GTPase M0M60_03615 PF00512 His Kinase A (phospho-acceptor) domain M0M60_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_03615 PF00672 HAMP domain M0M60_03620 PF00072 Response regulator receiver domain M0M60_03620 PF00486 Transcriptional regulatory protein, C terminal M0M60_03625 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M0M60_03630 PF01272 Transcription elongation factor, GreA/GreB, C-term M0M60_03630 PF03449 Transcription elongation factor, N-terminal M0M60_03635 PF01985 CRS1 / YhbY (CRM) domain M0M60_03640 PF01728 FtsJ-like methyltransferase M0M60_03645 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_03645 PF06480 FtsH Extracellular M0M60_03645 PF01434 Peptidase family M41 M0M60_03645 PF17862 AAA+ lid domain M0M60_03650 PF00809 Pterin binding enzyme M0M60_03655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0M60_03655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0M60_03655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0M60_03655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0M60_03660 PF03840 Preprotein translocase SecG subunit M0M60_03675 PF17384 RimP C-terminal SH3 domain M0M60_03675 PF02576 RimP N-terminal domain M0M60_03680 PF13184 NusA-like KH domain M0M60_03680 PF08529 NusA N-terminal domain M0M60_03680 PF00575 S1 RNA binding domain M0M60_03685 PF08364 Bacterial translation initiation factor IF-2 associated region M0M60_03685 PF11987 Translation-initiation factor 2 M0M60_03685 PF04760 Translation initiation factor IF-2, N-terminal region M0M60_03685 PF00009 Elongation factor Tu GTP binding domain M0M60_03685 PF03144 Elongation factor Tu domain 2 M0M60_03690 PF02033 Ribosome-binding factor A M0M60_03695 PF09157 Pseudouridine synthase II TruB, C-terminal M0M60_03695 PF16198 tRNA pseudouridylate synthase B C-terminal domain M0M60_03695 PF01509 TruB family pseudouridylate synthase (N terminal domain) M0M60_03700 PF00312 Ribosomal protein S15 M0M60_03710 PF03725 3' exoribonuclease family, domain 2 M0M60_03710 PF00013 KH domain M0M60_03710 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M0M60_03710 PF01138 3' exoribonuclease family, domain 1 M0M60_03710 PF00575 S1 RNA binding domain M0M60_03715 PF07719 Tetratricopeptide repeat M0M60_03715 PF13181 Tetratricopeptide repeat M0M60_03720 PF03880 DbpA RNA binding domain M0M60_03720 PF00270 DEAD/DEAH box helicase M0M60_03720 PF12343 Cold shock protein DEAD box A M0M60_03720 PF00271 Helicase conserved C-terminal domain M0M60_03730 PF01381 Helix-turn-helix M0M60_03740 PF00296 Luciferase-like monooxygenase M0M60_03745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_03745 PF00529 HlyD membrane-fusion protein of T1SS M0M60_03750 PF00873 AcrB/AcrD/AcrF family M0M60_03755 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M0M60_03755 PF02321 Outer membrane efflux protein M0M60_03760 PF01136 Peptidase family U32 M0M60_03765 PF01136 Peptidase family U32 M0M60_03770 PF02036 SCP-2 sterol transfer family M0M60_03775 PF13508 Acetyltransferase (GNAT) domain M0M60_03780 PF01541 GIY-YIG catalytic domain M0M60_03795 PF13416 Bacterial extracellular solute-binding protein M0M60_03800 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_03805 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_03810 PF00005 ABC transporter M0M60_03810 PF17912 MalK OB fold domain M0M60_03810 PF03459 TOBE domain M0M60_03825 PF13460 NAD(P)H-binding M0M60_03830 PF12706 Beta-lactamase superfamily domain M0M60_03840 PF07969 Amidohydrolase family M0M60_03845 PF00005 ABC transporter M0M60_03850 PF00005 ABC transporter M0M60_03855 PF06007 Phosphonate metabolism protein PhnJ M0M60_03860 PF05861 Bacterial phosphonate metabolism protein (PhnI) M0M60_03865 PF05845 Bacterial phosphonate metabolism protein (PhnH) M0M60_03870 PF06754 Phosphonate metabolism protein PhnG M0M60_03875 PF00392 Bacterial regulatory proteins, gntR family M0M60_03875 PF07702 UTRA domain M0M60_03885 PF03477 ATP cone domain M0M60_03885 PF13597 Anaerobic ribonucleoside-triphosphate reductase M0M60_03890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_03890 PF00005 ABC transporter M0M60_03895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_03895 PF00005 ABC transporter M0M60_03900 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_03900 PF12911 N-terminal TM domain of oligopeptide transport permease C M0M60_03905 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_03915 PF04074 YhcH/YjgK/YiaL M0M60_03920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0M60_03920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0M60_03925 PF06877 Regulator of ribonuclease activity B M0M60_03930 PF00583 Acetyltransferase (GNAT) family M0M60_03935 PF00133 tRNA synthetases class I (I, L, M and V) M0M60_03935 PF10458 Valyl tRNA synthetase tRNA binding arm M0M60_03935 PF08264 Anticodon-binding domain of tRNA M0M60_03940 PF04364 DNA polymerase III chi subunit, HolC M0M60_03945 PF00883 Cytosol aminopeptidase family, catalytic domain M0M60_03945 PF02789 Cytosol aminopeptidase family, N-terminal domain M0M60_03950 PF03739 Lipopolysaccharide export system permease LptF/LptG M0M60_03955 PF03739 Lipopolysaccharide export system permease LptF/LptG M0M60_03965 PF00589 Phage integrase family M0M60_03965 PF13356 Arm DNA-binding domain M0M60_03975 PF08676 MutL C terminal dimerisation domain M0M60_03975 PF01119 DNA mismatch repair protein, C-terminal domain M0M60_03980 PF01695 IstB-like ATP binding protein M0M60_03985 PF00665 Integrase core domain M0M60_03985 PF02796 Helix-turn-helix domain of resolvase M0M60_03995 PF01797 Transposase IS200 like M0M60_04000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M0M60_04005 PF13525 Outer membrane lipoprotein M0M60_04010 PF00849 RNA pseudouridylate synthase M0M60_04010 PF01479 S4 domain M0M60_04015 PF02578 Multi-copper polyphenol oxidoreductase laccase M0M60_04020 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_04020 PF07724 AAA domain (Cdc48 subfamily) M0M60_04020 PF02861 Clp amino terminal domain, pathogenicity island component M0M60_04020 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_04020 PF17871 AAA lid domain M0M60_04050 PF10043 Predicted periplasmic lipoprotein (DUF2279) M0M60_04055 PF13091 PLD-like domain M0M60_04060 PF13607 Succinyl-CoA ligase like flavodoxin domain M0M60_04060 PF13380 CoA binding domain M0M60_04060 PF00583 Acetyltransferase (GNAT) family M0M60_04065 PF03942 DTW domain M0M60_04070 PF00085 Thioredoxin M0M60_04075 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0M60_04075 PF00588 SpoU rRNA Methylase family M0M60_04080 PF07690 Major Facilitator Superfamily M0M60_04085 PF00529 HlyD membrane-fusion protein of T1SS M0M60_04085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_04090 PF01047 MarR family M0M60_04095 PF05437 Branched-chain amino acid transport protein (AzlD) M0M60_04100 PF03591 AzlC protein M0M60_04105 PF07690 Major Facilitator Superfamily M0M60_04115 PF01425 Amidase M0M60_04130 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_04135 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_04140 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_04145 PF00005 ABC transporter M0M60_04155 PF01695 IstB-like ATP binding protein M0M60_04160 PF00665 Integrase core domain M0M60_04160 PF02796 Helix-turn-helix domain of resolvase M0M60_04165 PF00266 Aminotransferase class-V M0M60_04170 PF07687 Peptidase dimerisation domain M0M60_04170 PF01546 Peptidase family M20/M25/M40 M0M60_04180 PF08479 POTRA domain, ShlB-type M0M60_04180 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0M60_04185 PF05860 haemagglutination activity domain M0M60_04190 PF18254 HMW1 domain 2 M0M60_04190 PF18071 HMW1C N-terminal M0M60_04200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0M60_04200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M0M60_04200 PF09317 Domain of unknown function (DUF1974) M0M60_04205 PF13580 SIS domain M0M60_04210 PF13230 Glutamine amidotransferases class-II M0M60_04215 PF03734 L,D-transpeptidase catalytic domain M0M60_04225 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) M0M60_04225 PF11973 NQRA C-terminal domain M0M60_04230 PF03116 NQR2, RnfD, RnfE family M0M60_04235 PF04205 FMN-binding domain M0M60_04240 PF02508 Rnf-Nqr subunit, membrane protein M0M60_04245 PF02508 Rnf-Nqr subunit, membrane protein M0M60_04250 PF00111 2Fe-2S iron-sulfur cluster binding domain M0M60_04250 PF00970 Oxidoreductase FAD-binding domain M0M60_04250 PF00175 Oxidoreductase NAD-binding domain M0M60_04255 PF02424 ApbE family M0M60_04265 PF03009 Glycerophosphoryl diester phosphodiesterase family M0M60_04270 PF11799 impB/mucB/samB family C-terminal domain M0M60_04270 PF00817 impB/mucB/samB family M0M60_04270 PF11798 IMS family HHH motif M0M60_04275 PF07687 Peptidase dimerisation domain M0M60_04275 PF01546 Peptidase family M20/M25/M40 M0M60_04280 PF03466 LysR substrate binding domain M0M60_04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_04295 PF00156 Phosphoribosyl transferase domain M0M60_04300 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) M0M60_04305 PF07417 Sigma factor-binding transcriptional regulator Crl M0M60_04310 PF00696 Amino acid kinase family M0M60_04310 PF01472 PUA domain M0M60_04315 PF00171 Aldehyde dehydrogenase family M0M60_04320 PF07238 PilZ domain M0M60_04320 PF07317 Flagellar regulator YcgR M0M60_04340 PF01202 Shikimate kinase M0M60_04345 PF06865 Pyrimidine/purine nucleoside phosphorylase M0M60_04350 PF04381 Putative exonuclease, RdgC M0M60_04355 PF00480 ROK family M0M60_04360 PF00665 Integrase core domain M0M60_04360 PF02796 Helix-turn-helix domain of resolvase M0M60_04365 PF01695 IstB-like ATP binding protein M0M60_04370 PF13476 AAA domain M0M60_04375 PF12320 Type 5 capsule protein repressor C-terminal domain M0M60_04375 PF00149 Calcineurin-like phosphoesterase M0M60_04380 PF00072 Response regulator receiver domain M0M60_04380 PF00486 Transcriptional regulatory protein, C terminal M0M60_04385 PF00989 PAS fold M0M60_04385 PF00512 His Kinase A (phospho-acceptor) domain M0M60_04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_04385 PF11808 Phosphate regulon sensor protein PhoR M0M60_04390 PF12849 PBP superfamily domain M0M60_04395 PF05525 Branched-chain amino acid transport protein M0M60_04400 PF00324 Amino acid permease M0M60_04405 PF00128 Alpha amylase, catalytic domain M0M60_04405 PF02903 Alpha amylase, N-terminal ig-like domain M0M60_04425 PF01797 Transposase IS200 like M0M60_04430 PF00578 AhpC/TSA family M0M60_04430 PF10417 C-terminal domain of 1-Cys peroxiredoxin M0M60_04435 PF04336 Acyl carrier protein phosphodiesterase M0M60_04440 PF02547 Queuosine biosynthesis protein M0M60_04445 PF01702 Queuine tRNA-ribosyltransferase M0M60_04450 PF02699 Preprotein translocase subunit M0M60_04455 PF02355 Protein export membrane protein M0M60_04455 PF13721 SecD export protein N-terminal TM region M0M60_04455 PF07549 SecD/SecF GG Motif M0M60_04460 PF07549 SecD/SecF GG Motif M0M60_04460 PF02355 Protein export membrane protein M0M60_04465 PF01797 Transposase IS200 like M0M60_04480 PF03477 ATP cone domain M0M60_04485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0M60_04485 PF01872 RibD C-terminal domain M0M60_04490 PF00885 6,7-dimethyl-8-ribityllumazine synthase M0M60_04495 PF01029 NusB family M0M60_04500 PF00586 AIR synthase related protein, N-terminal domain M0M60_04500 PF02769 AIR synthase related protein, C-terminal domain M0M60_04505 PF04608 Phosphatidylglycerophosphatase A M0M60_04510 PF01797 Transposase IS200 like M0M60_04515 PF02780 Transketolase, C-terminal domain M0M60_04515 PF02779 Transketolase, pyrimidine binding domain M0M60_04515 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M0M60_04520 PF00348 Polyprenyl synthetase M0M60_04525 PF02609 Exonuclease VII small subunit M0M60_04530 PF02568 Thiamine biosynthesis protein (ThiI) M0M60_04530 PF02926 THUMP domain M0M60_04535 PF01965 DJ-1/PfpI family M0M60_04540 PF02558 Ketopantoate reductase PanE/ApbA M0M60_04540 PF08546 Ketopantoate reductase PanE/ApbA C terminal M0M60_04545 PF04461 Protein of unknown function (DUF520) M0M60_04550 PF07690 Major Facilitator Superfamily M0M60_04555 PF01040 UbiA prenyltransferase family M0M60_04560 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M0M60_04565 PF00510 Cytochrome c oxidase subunit III M0M60_04570 PF00115 Cytochrome C and Quinol oxidase polypeptide I M0M60_04575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M0M60_04575 PF06481 COX Aromatic Rich Motif M0M60_04580 PF03502 Nucleoside-specific channel-forming protein, Tsx M0M60_04585 PF07690 Major Facilitator Superfamily M0M60_04590 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M0M60_04590 PF03923 Uncharacterized lipoprotein M0M60_04595 PF01722 BolA-like protein M0M60_04600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0M60_04600 PF05698 Bacterial trigger factor protein (TF) C-terminus M0M60_04600 PF05697 Bacterial trigger factor protein (TF) M0M60_04605 PF00574 Clp protease M0M60_04610 PF06689 ClpX C4-type zinc finger M0M60_04610 PF07724 AAA domain (Cdc48 subfamily) M0M60_04610 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_04615 PF02190 ATP-dependent protease La (LON) substrate-binding domain M0M60_04615 PF05362 Lon protease (S16) C-terminal proteolytic domain M0M60_04615 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_04620 PF00216 Bacterial DNA-binding protein M0M60_04625 PF13145 PPIC-type PPIASE domain M0M60_04640 PF06508 Queuosine biosynthesis protein QueC M0M60_04645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_04645 PF12793 Sugar transport-related sRNA regulator N-term M0M60_04655 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_04660 PF01037 Lrp/AsnC ligand binding domain M0M60_04660 PF13404 AsnC-type helix-turn-helix domain M0M60_04665 PF00005 ABC transporter M0M60_04665 PF00664 ABC transporter transmembrane region M0M60_04670 PF00664 ABC transporter transmembrane region M0M60_04670 PF00005 ABC transporter M0M60_04675 PF00543 Nitrogen regulatory protein P-II M0M60_04680 PF00909 Ammonium Transporter Family M0M60_04690 PF09619 Type III secretion system lipoprotein chaperone (YscW) M0M60_04695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M0M60_04705 PF05321 Haemolysin expression modulating protein M0M60_04710 PF10757 Biofilm formation regulator YbaJ M0M60_04720 PF00444 Ribosomal protein L36 M0M60_04725 PF01197 Ribosomal protein L31 M0M60_04730 PF00873 AcrB/AcrD/AcrF family M0M60_04735 PF00529 HlyD membrane-fusion protein of T1SS M0M60_04735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_04740 PF00440 Bacterial regulatory proteins, tetR family M0M60_04740 PF08361 MAATS-type transcriptional repressor, C-terminal region M0M60_04745 PF02635 DsrE/DsrF-like family M0M60_04750 PF12795 Mechanosensitive ion channel porin domain M0M60_04750 PF12794 Mechanosensitive ion channel inner membrane domain 1 M0M60_04750 PF00924 Mechanosensitive ion channel M0M60_04755 PF10689 Protein of unknown function (DUF2496) M0M60_04770 PF00665 Integrase core domain M0M60_04770 PF02796 Helix-turn-helix domain of resolvase M0M60_04775 PF01695 IstB-like ATP binding protein M0M60_04780 PF00156 Phosphoribosyl transferase domain M0M60_04785 PF12169 DNA polymerase III subunits gamma and tau domain III M0M60_04785 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M0M60_04785 PF12170 DNA polymerase III tau subunit V interacting with alpha M0M60_04790 PF02575 YbaB/EbfC DNA-binding family M0M60_04795 PF02132 RecR protein M0M60_04795 PF13662 Toprim domain M0M60_04800 PF00183 Hsp90 protein M0M60_04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_04805 PF05191 Adenylate kinase, active site lid M0M60_04810 PF00762 Ferrochelatase M0M60_04815 PF00970 Oxidoreductase FAD-binding domain M0M60_04815 PF00111 2Fe-2S iron-sulfur cluster binding domain M0M60_04815 PF00175 Oxidoreductase NAD-binding domain M0M60_04820 PF00483 Nucleotidyl transferase M0M60_04825 PF16363 GDP-mannose 4,6 dehydratase M0M60_04830 PF16363 GDP-mannose 4,6 dehydratase M0M60_04835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0M60_04840 PF01370 NAD dependent epimerase/dehydratase family M0M60_04870 PF13439 Glycosyltransferase Family 4 M0M60_04870 PF00534 Glycosyl transferases group 1 M0M60_04885 PF01050 Mannose-6-phosphate isomerase M0M60_04885 PF00483 Nucleotidyl transferase M0M60_04890 PF00535 Glycosyl transferase family 2 M0M60_04895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0M60_04895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0M60_04895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0M60_04895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0M60_04900 PF02706 Chain length determinant protein M0M60_04905 PF00294 pfkB family carbohydrate kinase M0M60_04910 PF00999 Sodium/hydrogen exchanger family M0M60_04910 PF02254 TrkA-N domain M0M60_04915 PF07690 Major Facilitator Superfamily M0M60_04920 PF02872 5'-nucleotidase, C-terminal domain M0M60_04920 PF00149 Calcineurin-like phosphoesterase M0M60_04925 PF02872 5'-nucleotidase, C-terminal domain M0M60_04925 PF00149 Calcineurin-like phosphoesterase M0M60_04930 PF02872 5'-nucleotidase, C-terminal domain M0M60_04930 PF00149 Calcineurin-like phosphoesterase M0M60_04945 PF04073 Aminoacyl-tRNA editing domain M0M60_04955 PF01695 IstB-like ATP binding protein M0M60_04960 PF02796 Helix-turn-helix domain of resolvase M0M60_04960 PF00665 Integrase core domain M0M60_04970 PF00403 Heavy-metal-associated domain M0M60_04975 PF13411 MerR HTH family regulatory protein M0M60_04980 PF01957 NfeD-like C-terminal, partner-binding M0M60_04985 PF16200 C-terminal region of band_7 M0M60_04985 PF01145 SPFH domain / Band 7 family M0M60_04990 PF00085 Thioredoxin M0M60_04995 PF00106 short chain dehydrogenase M0M60_05000 PF13472 GDSL-like Lipase/Acylhydrolase family M0M60_05005 PF00005 ABC transporter M0M60_05015 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M0M60_05015 PF02222 ATP-grasp domain M0M60_05020 PF00731 AIR carboxylase M0M60_05025 PF00149 Calcineurin-like phosphoesterase M0M60_05030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M0M60_05035 PF09190 DALR domain M0M60_05035 PF01406 tRNA synthetases class I (C) catalytic domain M0M60_05040 PF01797 Transposase IS200 like M0M60_05045 PF00308 Bacterial dnaA protein M0M60_05050 PF03960 ArsC family M0M60_05055 PF01435 Peptidase family M48 M0M60_05055 PF07720 Tetratricopeptide repeat M0M60_05060 PF01594 AI-2E family transporter M0M60_05070 PF00578 AhpC/TSA family M0M60_05075 PF01842 ACT domain M0M60_05080 PF00701 Dihydrodipicolinate synthetase family M0M60_05085 PF06804 NlpB/DapX lipoprotein M0M60_05090 PF01797 Transposase IS200 like M0M60_05095 PF01259 SAICAR synthetase M0M60_05100 PF04228 Putative neutral zinc metallopeptidase M0M60_05105 PF04284 Protein of unknown function (DUF441) M0M60_05110 PF08351 Domain of unknown function (DUF1726) M0M60_05110 PF13718 GNAT acetyltransferase 2 M0M60_05110 PF05127 Helicase M0M60_05110 PF17176 tRNA-binding domain M0M60_05120 PF13980 Uncharacterised protein family (UPF0370) M0M60_05125 PF02557 D-alanyl-D-alanine carboxypeptidase M0M60_05130 PF01546 Peptidase family M20/M25/M40 M0M60_05130 PF07687 Peptidase dimerisation domain M0M60_05135 PF03960 ArsC family M0M60_05150 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_05155 PF08402 TOBE domain M0M60_05155 PF00005 ABC transporter M0M60_05165 PF00884 Sulfatase M0M60_05170 PF04055 Radical SAM superfamily M0M60_05170 PF13186 Iron-sulfur cluster-binding domain M0M60_05175 PF04307 LexA-binding, inner membrane-associated putative hydrolase M0M60_05185 PF00873 AcrB/AcrD/AcrF family M0M60_05195 PF00196 Bacterial regulatory proteins, luxR family M0M60_05195 PF00072 Response regulator receiver domain M0M60_05200 PF00037 4Fe-4S binding domain M0M60_05200 PF13187 4Fe-4S dicluster domain M0M60_05200 PF12800 4Fe-4S binding domain M0M60_05205 PF03927 NapD protein M0M60_05210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0M60_05210 PF00384 Molybdopterin oxidoreductase M0M60_05210 PF01568 Molydopterin dinucleotide binding domain M0M60_05210 PF10518 TAT (twin-arginine translocation) pathway signal sequence M0M60_05215 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) M0M60_05220 PF03264 NapC/NirT cytochrome c family, N-terminal region M0M60_05225 PF00293 NUDIX domain M0M60_05230 PF01515 Phosphate acetyl/butaryl transferase M0M60_05230 PF00390 Malic enzyme, N-terminal domain M0M60_05230 PF03949 Malic enzyme, NAD binding domain M0M60_05235 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M0M60_05240 PF01218 Coproporphyrinogen III oxidase M0M60_05245 PF00583 Acetyltransferase (GNAT) family M0M60_05255 PF03212 Pertactin M0M60_05255 PF13018 Extended Signal Peptide of Type V secretion system M0M60_05255 PF03797 Autotransporter beta-domain M0M60_05255 PF16168 Adhesin of bacterial autotransporter system, probable stalk M0M60_05260 PF04076 Bacterial OB fold (BOF) protein M0M60_05265 PF06572 Protein of unknown function (DUF1131) M0M60_05270 PF04261 Dyp-type peroxidase family M0M60_05275 PF00701 Dihydrodipicolinate synthetase family M0M60_05280 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M0M60_05290 PF12468 Type III secretion system leucine rich repeat protein M0M60_05295 PF00480 ROK family M0M60_05300 PF04074 YhcH/YjgK/YiaL M0M60_05305 PF01418 Helix-turn-helix domain, rpiR family M0M60_05305 PF01380 SIS domain M0M60_05310 PF07690 Major Facilitator Superfamily M0M60_05320 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_05325 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_05330 PF00005 ABC transporter M0M60_05335 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_05350 PF00486 Transcriptional regulatory protein, C terminal M0M60_05350 PF00072 Response regulator receiver domain M0M60_05355 PF00672 HAMP domain M0M60_05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_05355 PF00512 His Kinase A (phospho-acceptor) domain M0M60_05365 PF00155 Aminotransferase class I and II M0M60_05380 PF00474 Sodium:solute symporter family M0M60_05385 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_05385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M0M60_05390 PF00005 ABC transporter M0M60_05390 PF02687 FtsX-like permease family M0M60_05390 PF12704 MacB-like periplasmic core domain M0M60_05395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_05400 PF00072 Response regulator receiver domain M0M60_05400 PF00486 Transcriptional regulatory protein, C terminal M0M60_05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_05405 PF00512 His Kinase A (phospho-acceptor) domain M0M60_05405 PF00672 HAMP domain M0M60_05405 PF16527 Two-component sensor protein CpxA, periplasmic domain M0M60_05410 PF01797 Transposase IS200 like M0M60_05415 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M0M60_05420 PF05524 PEP-utilising enzyme, N-terminal M0M60_05420 PF00391 PEP-utilising enzyme, mobile domain M0M60_05420 PF02896 PEP-utilising enzyme, TIM barrel domain M0M60_05425 PF00381 PTS HPr component phosphorylation site M0M60_05430 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_05440 PF04354 ZipA, C-terminal FtsZ-binding domain M0M60_05445 PF12826 Helix-hairpin-helix motif M0M60_05445 PF00533 BRCA1 C Terminus (BRCT) domain M0M60_05445 PF01653 NAD-dependent DNA ligase adenylation domain M0M60_05445 PF03120 NAD-dependent DNA ligase OB-fold domain M0M60_05445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M0M60_05450 PF12843 Putative quorum-sensing-regulated virulence factor M0M60_05475 PF01797 Transposase IS200 like M0M60_05480 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0M60_05515 PF01773 Na+ dependent nucleoside transporter N-terminus M0M60_05515 PF07670 Nucleoside recognition M0M60_05515 PF07662 Na+ dependent nucleoside transporter C-terminus M0M60_05520 PF01566 Natural resistance-associated macrophage protein M0M60_05530 PF00248 Aldo/keto reductase family M0M60_05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_05535 PF03466 LysR substrate binding domain M0M60_05545 PF02685 Glucokinase M0M60_05550 PF07350 Protein of unknown function (DUF1479) M0M60_05555 PF00155 Aminotransferase class I and II M0M60_05560 PF01292 Prokaryotic cytochrome b561 M0M60_05570 PF03783 Curli production assembly/transport component CsgG M0M60_05580 PF05643 Putative bacterial lipoprotein (DUF799) M0M60_05590 PF02613 Nitrate reductase delta subunit M0M60_05595 PF04976 DMSO reductase anchor subunit (DmsC) M0M60_05600 PF12800 4Fe-4S binding domain M0M60_05600 PF13247 4Fe-4S dicluster domain M0M60_05605 PF01568 Molydopterin dinucleotide binding domain M0M60_05605 PF00384 Molybdopterin oxidoreductase M0M60_05605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0M60_05615 PF05638 Type VI secretion system effector, Hcp M0M60_05625 PF00005 ABC transporter M0M60_05630 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_05640 PF13406 Transglycosylase SLT domain M0M60_05685 PF05947 Type VI secretion system, TssF M0M60_05690 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_05690 PF17871 AAA lid domain M0M60_05690 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_05690 PF07724 AAA domain (Cdc48 subfamily) M0M60_05695 PF16970 Type-1 fimbrial protein, A M0M60_05700 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_05700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_05705 PF00577 Outer membrane usher protein M0M60_05705 PF13954 PapC N-terminal domain M0M60_05705 PF13953 PapC C-terminal domain M0M60_05710 PF00872 Transposase, Mutator family M0M60_05715 PF13953 PapC C-terminal domain M0M60_05715 PF13954 PapC N-terminal domain M0M60_05715 PF00577 Outer membrane usher protein M0M60_05725 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 M0M60_05730 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0M60_05745 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M0M60_05755 PF00665 Integrase core domain M0M60_05755 PF02796 Helix-turn-helix domain of resolvase M0M60_05760 PF01695 IstB-like ATP binding protein M0M60_05795 PF00005 ABC transporter M0M60_05800 PF03059 Nicotianamine synthase protein M0M60_05805 PF10100 Staphylopine dehydrogenase M0M60_05810 PF00892 EamA-like transporter family M0M60_05820 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_05825 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_05830 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_05835 PF00005 ABC transporter M0M60_05840 PF01817 Chorismate mutase type II M0M60_05845 PF12883 Protein of unknown function (DUF3828) M0M60_05850 PF01370 NAD dependent epimerase/dehydratase family M0M60_05855 PF11066 Protein of unknown function (DUF2867) M0M60_05855 PF13460 NAD(P)H-binding M0M60_05860 PF01212 Beta-eliminating lyase M0M60_05865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0M60_05865 PF00205 Thiamine pyrophosphate enzyme, central domain M0M60_05865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0M60_05870 PF00175 Oxidoreductase NAD-binding domain M0M60_05870 PF00970 Oxidoreductase FAD-binding domain M0M60_05870 PF00111 2Fe-2S iron-sulfur cluster binding domain M0M60_05875 PF03063 Prismane/CO dehydrogenase family M0M60_05880 PF03956 Lysine exporter LysO M0M60_05885 PF11398 Protein of unknown function (DUF2813) M0M60_05890 PF04393 Protein of unknown function (DUF535) M0M60_05895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_05900 PF00005 ABC transporter M0M60_05900 PF02687 FtsX-like permease family M0M60_05900 PF12704 MacB-like periplasmic core domain M0M60_05905 PF00313 'Cold-shock' DNA-binding domain M0M60_05910 PF02617 ATP-dependent Clp protease adaptor protein ClpS M0M60_05915 PF17871 AAA lid domain M0M60_05915 PF02861 Clp amino terminal domain, pathogenicity island component M0M60_05915 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_05915 PF07724 AAA domain (Cdc48 subfamily) M0M60_05915 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_05920 PF01797 Transposase IS200 like M0M60_05925 PF01176 Translation initiation factor 1A / IF-1 M0M60_05930 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M0M60_05935 PF00664 ABC transporter transmembrane region M0M60_05935 PF00005 ABC transporter M0M60_05940 PF00664 ABC transporter transmembrane region M0M60_05940 PF00005 ABC transporter M0M60_05945 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_05950 PF01037 Lrp/AsnC ligand binding domain M0M60_05955 PF01580 FtsK/SpoIIIE family M0M60_05955 PF17854 FtsK alpha domain M0M60_05955 PF09397 Ftsk gamma domain M0M60_05955 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M0M60_05960 PF03548 Outer membrane lipoprotein carrier protein LolA M0M60_05965 PF12002 MgsA AAA+ ATPase C terminal M0M60_05965 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_05965 PF16193 AAA C-terminal domain M0M60_05970 PF02403 Seryl-tRNA synthetase N-terminal domain M0M60_05970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0M60_05975 PF07690 Major Facilitator Superfamily M0M60_05980 PF04055 Radical SAM superfamily M0M60_05990 PF02901 Pyruvate formate lyase-like M0M60_05990 PF01228 Glycine radical M0M60_05995 PF01226 Formate/nitrite transporter M0M60_06000 PF18381 YcaO cyclodehydratase C-terminal domain M0M60_06000 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding M0M60_06005 PF00710 Asparaginase, N-terminal M0M60_06005 PF17763 Glutaminase/Asparaginase C-terminal domain M0M60_06010 PF05662 Coiled stalk of trimeric autotransporter adhesin M0M60_06010 PF05658 Head domain of trimeric autotransporter adhesin M0M60_06010 PF05658 Head domain of trimeric autotransporter adhesin M0M60_06010 PF05662 Coiled stalk of trimeric autotransporter adhesin M0M60_06010 PF13018 Extended Signal Peptide of Type V secretion system M0M60_06010 PF03895 YadA-like membrane anchor domain M0M60_06010 PF03895 YadA-like membrane anchor domain M0M60_06010 PF13018 Extended Signal Peptide of Type V secretion system M0M60_06020 PF00266 Aminotransferase class-V M0M60_06025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0M60_06030 PF02224 Cytidylate kinase M0M60_06035 PF00575 S1 RNA binding domain M0M60_06040 PF00216 Bacterial DNA-binding protein M0M60_06045 PF03772 Competence protein M0M60_06045 PF00753 Metallo-beta-lactamase superfamily M0M60_06050 PF00664 ABC transporter transmembrane region M0M60_06050 PF00005 ABC transporter M0M60_06055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M0M60_06060 PF07063 Domain of unknown function (DUF1338) M0M60_06065 PF00313 'Cold-shock' DNA-binding domain M0M60_06070 PF03966 Trm112p-like protein M0M60_06075 PF02348 Cytidylyltransferase M0M60_06080 PF01636 Phosphotransferase enzyme family M0M60_06085 PF13847 Methyltransferase domain M0M60_06090 PF17192 MukF middle domain M0M60_06090 PF17193 MukF C-terminal domain M0M60_06090 PF03882 MukF winged-helix domain M0M60_06095 PF04288 MukE-like family M0M60_06100 PF04310 MukB N-terminal M0M60_06100 PF16330 MukB hinge domain M0M60_06105 PF01797 Transposase IS200 like M0M60_06110 PF01471 Putative peptidoglycan binding domain M0M60_06110 PF03734 L,D-transpeptidase catalytic domain M0M60_06115 PF05951 Bacterial protein of unknown function (DUF882) M0M60_06120 PF00753 Metallo-beta-lactamase superfamily M0M60_06130 PF00155 Aminotransferase class I and II M0M60_06135 PF00267 Gram-negative porin M0M60_06140 PF00152 tRNA synthetases class II (D, K and N) M0M60_06140 PF01336 OB-fold nucleic acid binding domain M0M60_06145 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M0M60_06145 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M0M60_06150 PF01433 Peptidase family M1 domain M0M60_06150 PF11940 Domain of unknown function (DUF3458) Ig-like fold M0M60_06150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M0M60_06155 PF01180 Dihydroorotate dehydrogenase M0M60_06160 PF07126 Cell-division protein ZapC M0M60_06165 PF00111 2Fe-2S iron-sulfur cluster binding domain M0M60_06165 PF03473 MOSC domain M0M60_06165 PF03476 MOSC N-terminal beta barrel domain M0M60_06170 PF10672 S-adenosylmethionine-dependent methyltransferase M0M60_06170 PF01170 Putative RNA methylase family UPF0020 M0M60_06170 PF02926 THUMP domain M0M60_06175 PF00005 ABC transporter M0M60_06175 PF12848 ABC transporter M0M60_06175 PF16326 ABC transporter C-terminal domain M0M60_06180 PF04403 Paraquat-inducible protein A M0M60_06185 PF02470 MlaD protein M0M60_06190 PF03886 ABC-type transport auxiliary lipoprotein component M0M60_06195 PF04957 Ribosome modulation factor M0M60_06200 PF01797 Transposase IS200 like M0M60_06210 PF01695 IstB-like ATP binding protein M0M60_06215 PF00665 Integrase core domain M0M60_06215 PF02796 Helix-turn-helix domain of resolvase M0M60_06230 PF07977 FabA-like domain M0M60_06235 PF13654 AAA domain M0M60_06235 PF05362 Lon protease (S16) C-terminal proteolytic domain M0M60_06240 PF06303 MatP N-terminal domain M0M60_06240 PF17414 MatP C-terminal ribbon-helix-helix domain M0M60_06245 PF01797 Transposase IS200 like M0M60_06250 PF00691 OmpA family M0M60_06250 PF01389 OmpA-like transmembrane domain M0M60_06255 PF03846 Cell division inhibitor SulA M0M60_06260 PF04993 TfoX N-terminal domain M0M60_06260 PF04994 TfoX C-terminal domain M0M60_06265 PF12805 FUSC-like inner membrane protein yccS M0M60_06270 PF03733 Inner membrane component domain M0M60_06275 PF13361 UvrD-like helicase C-terminal domain M0M60_06275 PF12462 DNA helicase IV / RNA helicase N terminal M0M60_06275 PF00580 UvrD/REP helicase N-terminal domain M0M60_06280 PF02142 MGS-like domain M0M60_06285 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M0M60_06290 PF13380 CoA binding domain M0M60_06295 PF08755 Hemimethylated DNA-binding protein YccV like M0M60_06300 PF10672 S-adenosylmethionine-dependent methyltransferase M0M60_06300 PF17785 PUA-like domain M0M60_06305 PF00708 Acylphosphatase M0M60_06310 PF04358 DsrC like protein M0M60_06330 PF08031 Berberine and berberine like M0M60_06330 PF01565 FAD binding domain M0M60_06345 PF07977 FabA-like domain M0M60_06350 PF02801 Beta-ketoacyl synthase, C-terminal domain M0M60_06350 PF00109 Beta-ketoacyl synthase, N-terminal domain M0M60_06360 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M0M60_06360 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M0M60_06370 PF00378 Enoyl-CoA hydratase/isomerase M0M60_06385 PF00550 Phosphopantetheine attachment site M0M60_06390 PF00698 Acyl transferase domain M0M60_06400 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0M60_06415 PF00691 OmpA family M0M60_06415 PF05736 OprF membrane domain M0M60_06425 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_06425 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_06425 PF07724 AAA domain (Cdc48 subfamily) M0M60_06425 PF17871 AAA lid domain M0M60_06430 PF13296 Putative type VI secretion system Rhs element Vgr M0M60_06430 PF04717 Type VI secretion system, phage-baseplate injector M0M60_06430 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M0M60_06520 PF12848 ABC transporter M0M60_06520 PF00005 ABC transporter M0M60_06530 PF00872 Transposase, Mutator family M0M60_06535 PF00899 ThiF family M0M60_06540 PF03454 MoeA C-terminal region (domain IV) M0M60_06540 PF03453 MoeA N-terminal region (domain I and II) M0M60_06540 PF00994 Probable molybdopterin binding domain M0M60_06550 PF00005 ABC transporter M0M60_06555 PF13533 Biotin-lipoyl like M0M60_06570 PF00756 Putative esterase M0M60_06575 PF00107 Zinc-binding dehydrogenase M0M60_06575 PF08240 Alcohol dehydrogenase GroES-like domain M0M60_06580 PF03466 LysR substrate binding domain M0M60_06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_06585 PF06779 Uncharacterised MFS-type transporter YbfB M0M60_06590 PF01227 GTP cyclohydrolase I M0M60_06595 PF04235 Protein of unknown function (DUF418) M0M60_06600 PF13407 Periplasmic binding protein domain M0M60_06605 PF00005 ABC transporter M0M60_06610 PF02653 Branched-chain amino acid transport system / permease component M0M60_06615 PF02698 DUF218 domain M0M60_06620 PF03949 Malic enzyme, NAD binding domain M0M60_06620 PF00390 Malic enzyme, N-terminal domain M0M60_06625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M0M60_06625 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M0M60_06630 PF04172 LrgB-like family M0M60_06635 PF03788 LrgA family M0M60_06640 PF07690 Major Facilitator Superfamily M0M60_06660 PF01695 IstB-like ATP binding protein M0M60_06665 PF02796 Helix-turn-helix domain of resolvase M0M60_06665 PF00665 Integrase core domain M0M60_06670 PF01797 Transposase IS200 like M0M60_06675 PF01588 Putative tRNA binding domain M0M60_06675 PF09334 tRNA synthetases class I (M) M0M60_06680 PF10609 NUBPL iron-transfer P-loop NTPase M0M60_06685 PF00485 Phosphoribulokinase / Uridine kinase family M0M60_06690 PF00692 dUTPase M0M60_06695 PF05170 AsmA family M0M60_06700 PF03471 Transporter associated domain M0M60_06700 PF00571 CBS domain M0M60_06700 PF03741 Integral membrane protein TerC family M0M60_06705 PF11575 FhuF 2Fe-2S C-terminal domain M0M60_06705 PF06276 Ferric iron reductase FhuF-like transporter M0M60_06710 PF00282 Pyridoxal-dependent decarboxylase conserved domain M0M60_06715 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M0M60_06725 PF06276 Ferric iron reductase FhuF-like transporter M0M60_06725 PF04183 IucA / IucC family M0M60_06730 PF00005 ABC transporter M0M60_06735 PF01032 FecCD transport family M0M60_06740 PF01032 FecCD transport family M0M60_06745 PF01497 Periplasmic binding protein M0M60_06750 PF07715 TonB-dependent Receptor Plug Domain M0M60_06750 PF07660 Secretin and TonB N terminus short domain M0M60_06750 PF00593 TonB dependent receptor M0M60_06755 PF04183 IucA / IucC family M0M60_06755 PF06276 Ferric iron reductase FhuF-like transporter M0M60_06760 PF00483 Nucleotidyl transferase M0M60_06765 PF00483 Nucleotidyl transferase M0M60_06770 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M0M60_06770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M0M60_06775 PF01502 Phosphoribosyl-AMP cyclohydrolase M0M60_06775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M0M60_06780 PF00977 Histidine biosynthesis protein M0M60_06785 PF00977 Histidine biosynthesis protein M0M60_06790 PF00117 Glutamine amidotransferase class-I M0M60_06795 PF00475 Imidazoleglycerol-phosphate dehydratase M0M60_06800 PF00155 Aminotransferase class I and II M0M60_06805 PF00815 Histidinol dehydrogenase M0M60_06810 PF08029 HisG, C-terminal domain M0M60_06810 PF01634 ATP phosphoribosyltransferase M0M60_06820 PF01370 NAD dependent epimerase/dehydratase family M0M60_06830 PF02653 Branched-chain amino acid transport system / permease component M0M60_06835 PF00005 ABC transporter M0M60_06840 PF00005 ABC transporter M0M60_06845 PF00465 Iron-containing alcohol dehydrogenase M0M60_06850 PF13520 Amino acid permease M0M60_06860 PF08411 Exonuclease C-terminal M0M60_06860 PF00929 Exonuclease M0M60_06870 PF04363 Protein of unknown function (DUF496) M0M60_06875 PF00872 Transposase, Mutator family M0M60_06880 PF02369 Bacterial Ig-like domain (group 1) M0M60_06880 PF11924 Inverse autotransporter, beta-domain M0M60_06880 PF09134 Invasin, domain 3 M0M60_06885 PF07690 Major Facilitator Superfamily M0M60_06890 PF04134 Protein of unknown function, DUF393 M0M60_06900 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0M60_06905 PF13378 Enolase C-terminal domain-like M0M60_06905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0M60_06910 PF01070 FMN-dependent dehydrogenase M0M60_06915 PF00764 Arginosuccinate synthase M0M60_06920 PF01554 MatE M0M60_06930 PF01522 Polysaccharide deacetylase M0M60_06940 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M0M60_06950 PF00196 Bacterial regulatory proteins, luxR family M0M60_06950 PF00072 Response regulator receiver domain M0M60_06955 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M0M60_06965 PF03480 Bacterial extracellular solute-binding protein, family 7 M0M60_06970 PF01648 4'-phosphopantetheinyl transferase superfamily M0M60_06970 PF17837 4'-phosphopantetheinyl transferase N-terminal domain M0M60_06980 PF16875 Glycosyl hydrolase family 36 N-terminal domain M0M60_06980 PF16874 Glycosyl hydrolase family 36 C-terminal domain M0M60_06985 PF01306 LacY proton/sugar symporter M0M60_06990 PF00872 Transposase, Mutator family M0M60_06995 PF13991 BssS protein family M0M60_07000 PF06183 DinI-like family M0M60_07005 PF01979 Amidohydrolase family M0M60_07010 PF03992 Antibiotic biosynthesis monooxygenase M0M60_07020 PF00872 Transposase, Mutator family M0M60_07025 PF12111 Polyribonucleotide phosphorylase C terminal M0M60_07025 PF10150 Ribonuclease E/G family M0M60_07025 PF00575 S1 RNA binding domain M0M60_07030 PF00849 RNA pseudouridylate synthase M0M60_07030 PF01479 S4 domain M0M60_07035 PF01797 Transposase IS200 like M0M60_07040 PF02545 Maf-like protein M0M60_07045 PF02620 Large ribosomal RNA subunit accumulation protein YceD M0M60_07050 PF01783 Ribosomal L32p protein family M0M60_07055 PF02504 Fatty acid synthesis protein M0M60_07060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0M60_07060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0M60_07065 PF00698 Acyl transferase domain M0M60_07075 PF00550 Phosphopantetheine attachment site M0M60_07080 PF00109 Beta-ketoacyl synthase, N-terminal domain M0M60_07080 PF02801 Beta-ketoacyl synthase, C-terminal domain M0M60_07085 PF01797 Transposase IS200 like M0M60_07090 PF01063 Amino-transferase class IV M0M60_07100 PF02618 YceG-like family M0M60_07105 PF02223 Thymidylate kinase M0M60_07110 PF09115 DNA polymerase III, delta subunit, C terminal M0M60_07115 PF01026 TatD related DNase M0M60_07120 PF02378 Phosphotransferase system, EIIC M0M60_07120 PF00367 phosphotransferase system, EIIB M0M60_07125 PF01797 Transposase IS200 like M0M60_07130 PF08501 Shikimate dehydrogenase substrate binding domain M0M60_07135 PF01230 HIT domain M0M60_07140 PF07233 Protein of unknown function (DUF1425) M0M60_07145 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M0M60_07145 PF13036 Peptidoglycan-synthase activator LpoB M0M60_07150 PF01636 Phosphotransferase enzyme family M0M60_07155 PF00933 Glycosyl hydrolase family 3 N terminal domain M0M60_07160 PF05728 Uncharacterised protein family (UPF0227) M0M60_07165 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_07180 PF00872 Transposase, Mutator family M0M60_07185 PF01695 IstB-like ATP binding protein M0M60_07190 PF00665 Integrase core domain M0M60_07190 PF02796 Helix-turn-helix domain of resolvase M0M60_07195 PF05433 Glycine zipper 2TM domain M0M60_07200 PF02559 CarD-like/TRCF domain M0M60_07200 PF17757 UvrB interaction domain M0M60_07200 PF03461 TRCF domain M0M60_07200 PF00270 DEAD/DEAH box helicase M0M60_07200 PF00271 Helicase conserved C-terminal domain M0M60_07205 PF02687 FtsX-like permease family M0M60_07205 PF12704 MacB-like periplasmic core domain M0M60_07210 PF00005 ABC transporter M0M60_07215 PF02687 FtsX-like permease family M0M60_07215 PF12704 MacB-like periplasmic core domain M0M60_07225 PF02146 Sir2 family M0M60_07230 PF07687 Peptidase dimerisation domain M0M60_07230 PF01546 Peptidase family M20/M25/M40 M0M60_07235 PF08007 Cupin superfamily protein M0M60_07240 PF08918 PhoQ Sensor M0M60_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_07245 PF00072 Response regulator receiver domain M0M60_07245 PF00486 Transcriptional regulatory protein, C terminal M0M60_07255 PF00206 Lyase M0M60_07255 PF08328 Adenylosuccinate lyase C-terminal M0M60_07260 PF04356 Protein of unknown function (DUF489) M0M60_07270 PF00293 NUDIX domain M0M60_07275 PF00849 RNA pseudouridylate synthase M0M60_07280 PF00180 Isocitrate/isopropylmalate dehydrogenase M0M60_07285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M0M60_07285 PF00356 Bacterial regulatory proteins, lacI family M0M60_07295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0M60_07295 PF08447 PAS fold M0M60_07300 PF05368 NmrA-like family M0M60_07305 PF01638 HxlR-like helix-turn-helix M0M60_07315 PF00328 Histidine phosphatase superfamily (branch 2) M0M60_07320 PF14001 YdfZ protein M0M60_07330 PF01037 Lrp/AsnC ligand binding domain M0M60_07330 PF13404 AsnC-type helix-turn-helix domain M0M60_07335 PF10777 Inner membrane protein YlaC M0M60_07340 PF08659 KR domain M0M60_07340 PF00109 Beta-ketoacyl synthase, N-terminal domain M0M60_07340 PF14765 Polyketide synthase dehydratase M0M60_07340 PF00550 Phosphopantetheine attachment site M0M60_07340 PF16197 Ketoacyl-synthetase C-terminal extension M0M60_07340 PF00107 Zinc-binding dehydrogenase M0M60_07340 PF08240 Alcohol dehydrogenase GroES-like domain M0M60_07340 PF02801 Beta-ketoacyl synthase, C-terminal domain M0M60_07340 PF00698 Acyl transferase domain M0M60_07350 PF01797 Transposase IS200 like M0M60_07360 PF00313 'Cold-shock' DNA-binding domain M0M60_07365 PF10781 Dextransucrase DSRB M0M60_07375 PF02308 MgtC family M0M60_07380 PF00689 Cation transporting ATPase, C-terminus M0M60_07380 PF00690 Cation transporter/ATPase, N-terminus M0M60_07390 PF05280 Flagellar transcriptional activator (FlhC) M0M60_07395 PF01618 MotA/TolQ/ExbB proton channel family M0M60_07400 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0M60_07400 PF00691 OmpA family M0M60_07405 PF02895 Signal transducing histidine kinase, homodimeric domain M0M60_07405 PF01584 CheW-like domain M0M60_07405 PF09078 CheY binding M0M60_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_07405 PF01627 Hpt domain M0M60_07410 PF01584 CheW-like domain M0M60_07415 PF07690 Major Facilitator Superfamily M0M60_07420 PF01042 Endoribonuclease L-PSP M0M60_07430 PF08348 YheO-like PAS domain M0M60_07430 PF13309 HTH domain M0M60_07435 PF12951 Passenger-associated-transport-repeat M0M60_07450 PF00672 HAMP domain M0M60_07450 PF02203 Tar ligand binding domain homologue M0M60_07450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0M60_07460 PF01739 CheR methyltransferase, SAM binding domain M0M60_07460 PF03705 CheR methyltransferase, all-alpha domain M0M60_07465 PF01339 CheB methylesterase M0M60_07465 PF00072 Response regulator receiver domain M0M60_07470 PF00072 Response regulator receiver domain M0M60_07475 PF04344 Chemotaxis phosphatase, CheZ M0M60_07480 PF01510 N-acetylmuramoyl-L-alanine amidase M0M60_07495 PF01168 Alanine racemase, N-terminal domain M0M60_07495 PF00842 Alanine racemase, C-terminal domain M0M60_07525 PF01695 IstB-like ATP binding protein M0M60_07530 PF02796 Helix-turn-helix domain of resolvase M0M60_07530 PF00665 Integrase core domain M0M60_07545 PF07351 Protein of unknown function (DUF1480) M0M60_07560 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_07560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_07585 PF04403 Paraquat-inducible protein A M0M60_07590 PF13185 GAF domain M0M60_07595 PF04352 ProQ/FINO family M0M60_07595 PF17516 ProQ C-terminal domain M0M60_07600 PF11818 C-terminal domain of tail specific protease (DUF3340) M0M60_07600 PF00595 PDZ domain M0M60_07600 PF17804 Tail specific protease N-terminal domain M0M60_07600 PF03572 Peptidase family S41 M0M60_07605 PF01435 Peptidase family M48 M0M60_07610 PF00419 Fimbrial protein M0M60_07615 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_07615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_07620 PF00577 Outer membrane usher protein M0M60_07620 PF13953 PapC C-terminal domain M0M60_07620 PF13954 PapC N-terminal domain M0M60_07630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_07630 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_07635 PF07690 Major Facilitator Superfamily M0M60_07640 PF14583 Oligogalacturonate lyase M0M60_07645 PF09339 IclR helix-turn-helix domain M0M60_07645 PF01614 Bacterial transcriptional regulator M0M60_07650 PF01510 N-acetylmuramoyl-L-alanine amidase M0M60_07655 PF00375 Sodium:dicarboxylate symporter family M0M60_07660 PF04307 LexA-binding, inner membrane-associated putative hydrolase M0M60_07665 PF06178 Oligogalacturonate-specific porin protein (KdgM) M0M60_07670 PF01547 Bacterial extracellular solute-binding protein M0M60_07675 PF00005 ABC transporter M0M60_07675 PF17912 MalK OB fold domain M0M60_07675 PF03459 TOBE domain M0M60_07680 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_07685 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_07690 PF06917 Periplasmic pectate lyase M0M60_07700 PF04962 KduI/IolB family M0M60_07705 PF07883 Cupin domain M0M60_07710 PF00872 Transposase, Mutator family M0M60_07715 PF00356 Bacterial regulatory proteins, lacI family M0M60_07715 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M0M60_07720 PF02796 Helix-turn-helix domain of resolvase M0M60_07720 PF00665 Integrase core domain M0M60_07725 PF01695 IstB-like ATP binding protein M0M60_07730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M0M60_07730 PF00356 Bacterial regulatory proteins, lacI family M0M60_07740 PF06167 Glucose-regulated metallo-peptidase M90 M0M60_07755 PF00664 ABC transporter transmembrane region M0M60_07755 PF00005 ABC transporter M0M60_07765 PF12833 Helix-turn-helix domain M0M60_07770 PF10964 Protein of unknown function (DUF2766) M0M60_07775 PF13996 YobH-like protein M0M60_07780 PF13998 MgrB protein M0M60_07785 PF13974 YebO-like protein M0M60_07800 PF00324 Amino acid permease M0M60_07805 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP M0M60_07810 PF10736 Protein of unknown function (DUF2627) M0M60_07815 PF00313 'Cold-shock' DNA-binding domain M0M60_07820 PF02578 Multi-copper polyphenol oxidoreductase laccase M0M60_07825 PF13847 Methyltransferase domain M0M60_07835 PF08448 PAS fold M0M60_07835 PF08447 PAS fold M0M60_07835 PF05231 MASE1 M0M60_07835 PF13426 PAS domain M0M60_07835 PF00563 EAL domain M0M60_07835 PF00990 Diguanylate cyclase, GGDEF domain M0M60_07840 PF00593 TonB dependent receptor M0M60_07840 PF07715 TonB-dependent Receptor Plug Domain M0M60_07845 PF02659 Putative manganese efflux pump M0M60_07850 PF06173 Protein of unknown function (DUF986) M0M60_07855 PF03613 PTS system mannose/fructose/sorbose family IID component M0M60_07860 PF03609 PTS system sorbose-specific iic component M0M60_07865 PF03610 PTS system fructose IIA component M0M60_07865 PF03830 PTS system sorbose subfamily IIB component M0M60_07875 PF01047 MarR family M0M60_07880 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0M60_07885 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0M60_07890 PF00171 Aldehyde dehydrogenase family M0M60_07895 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0M60_07900 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase M0M60_07905 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0M60_07910 PF03328 HpcH/HpaI aldolase/citrate lyase family M0M60_07920 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal M0M60_07920 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal M0M60_07925 PF01613 Flavin reductase like domain M0M60_07930 PF03313 Serine dehydratase alpha chain M0M60_07930 PF03315 Serine dehydratase beta chain M0M60_07935 PF00293 NUDIX domain M0M60_07940 PF04715 Anthranilate synthase component I, N terminal region M0M60_07940 PF00425 chorismate binding enzyme M0M60_07945 PF03701 Uncharacterised protein family (UPF0181) M0M60_07950 PF02222 ATP-grasp domain M0M60_07955 PF00271 Helicase conserved C-terminal domain M0M60_07955 PF03880 DbpA RNA binding domain M0M60_07955 PF00270 DEAD/DEAH box helicase M0M60_07960 PF07130 YebG protein M0M60_07965 PF04266 ASCH domain M0M60_07970 PF13995 YebF-like protein M0M60_07975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M0M60_07975 PF00326 Prolyl oligopeptidase family M0M60_07980 PF00561 alpha/beta hydrolase fold M0M60_07985 PF06440 DNA polymerase III, theta subunit M0M60_07990 PF00210 Ferritin-like domain M0M60_07995 PF04234 CopC domain M0M60_08005 PF10709 Protein of unknown function (DUF2511) M0M60_08020 PF01312 FlhB HrpN YscU SpaS Family M0M60_08025 PF00771 FHIPEP family M0M60_08030 PF06366 Flagellar protein FlhE M0M60_08040 PF01797 Transposase IS200 like M0M60_08050 PF05130 FlgN protein M0M60_08055 PF04316 Anti-sigma-28 factor, FlgM M0M60_08060 PF17656 FlgA N-terminal domain M0M60_08060 PF13144 Chaperone for flagella basal body P-ring formation M0M60_08065 PF00460 Flagella basal body rod protein M0M60_08070 PF00460 Flagella basal body rod protein M0M60_08070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0M60_08075 PF13861 FlgD Tudor-like domain M0M60_08075 PF13860 FlgD Ig-like domain M0M60_08075 PF03963 Flagellar hook capping protein - N-terminal region M0M60_08080 PF00460 Flagella basal body rod protein M0M60_08080 PF07559 Flagellar basal body protein FlaE M0M60_08080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0M60_08095 PF02107 Flagellar L-ring protein M0M60_08100 PF02119 Flagellar P-ring protein M0M60_08105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M0M60_08105 PF10135 Rod binding protein M0M60_08110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0M60_08110 PF00460 Flagella basal body rod protein M0M60_08115 PF00669 Bacterial flagellin N-terminal helical region M0M60_08120 PF04198 Putative sugar-binding domain M0M60_08125 PF00596 Class II Aldolase and Adducin N-terminal domain M0M60_08130 PF02653 Branched-chain amino acid transport system / permease component M0M60_08135 PF13407 Periplasmic binding protein domain M0M60_08140 PF00005 ABC transporter M0M60_08145 PF02653 Branched-chain amino acid transport system / permease component M0M60_08150 PF00294 pfkB family carbohydrate kinase M0M60_08165 PF01311 Bacterial export proteins, family 1 M0M60_08170 PF01313 Bacterial export proteins, family 3 M0M60_08175 PF00813 FliP family M0M60_08180 PF04347 Flagellar biosynthesis protein, FliO M0M60_08185 PF16973 Flagellar motor switch protein FliN N-terminal M0M60_08185 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0M60_08190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0M60_08190 PF02154 Flagellar motor switch protein FliM M0M60_08195 PF03748 Flagellar basal body-associated protein FliL M0M60_08200 PF02120 Flagellar hook-length control protein FliK M0M60_08205 PF02050 Flagellar FliJ protein M0M60_08210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0M60_08210 PF18269 T3SS EscN ATPase C-terminal domain M0M60_08215 PF02108 Flagellar assembly protein FliH M0M60_08220 PF14842 FliG N-terminal domain M0M60_08220 PF14841 FliG middle domain M0M60_08220 PF01706 FliG C-terminal domain M0M60_08225 PF01514 Secretory protein of YscJ/FliF family M0M60_08225 PF08345 Flagellar M-ring protein C-terminal M0M60_08230 PF02049 Flagellar hook-basal body complex protein FliE M0M60_08250 PF00730 HhH-GPD superfamily base excision DNA repair protein M0M60_08255 PF01966 HD domain M0M60_08260 PF00672 HAMP domain M0M60_08260 PF00211 Adenylate and Guanylate cyclase catalytic domain M0M60_08260 PF02743 Cache domain M0M60_08265 PF12833 Helix-turn-helix domain M0M60_08270 PF05400 Flagellar protein FliT M0M60_08275 PF02561 Flagellar protein FliS M0M60_08280 PF07195 Flagellar hook-associated protein 2 C-terminus M0M60_08280 PF07196 Flagellin hook IN motif M0M60_08280 PF02465 Flagellar hook-associated protein 2 N-terminus M0M60_08285 PF00700 Bacterial flagellin C-terminal helical region M0M60_08285 PF00669 Bacterial flagellin N-terminal helical region M0M60_08285 PF08884 Flagellin D3 domain M0M60_08290 PF04542 Sigma-70 region 2 M0M60_08290 PF04539 Sigma-70 region 3 M0M60_08290 PF04545 Sigma-70, region 4 M0M60_08295 PF02899 Phage integrase, N-terminal SAM-like domain M0M60_08300 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_08305 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_08310 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_08315 PF00005 ABC transporter M0M60_08335 PF14850 DNA-binding domain of Proline dehydrogenase M0M60_08335 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M0M60_08335 PF00171 Aldehyde dehydrogenase family M0M60_08335 PF01619 Proline dehydrogenase M0M60_08345 PF00474 Sodium:solute symporter family M0M60_08350 PF03239 Iron permease FTR1 family M0M60_08355 PF09375 Imelysin M0M60_08355 PF13473 Cupredoxin-like domain M0M60_08360 PF04261 Dyp-type peroxidase family M0M60_08365 PF03358 NADPH-dependent FMN reductase M0M60_08370 PF01344 Kelch motif M0M60_08375 PF00324 Amino acid permease M0M60_08385 PF13505 Outer membrane protein beta-barrel domain M0M60_08395 PF06942 GlpM protein M0M60_08400 PF10769 Protein of unknown function (DUF2594) M0M60_08405 PF00196 Bacterial regulatory proteins, luxR family M0M60_08405 PF00072 Response regulator receiver domain M0M60_08410 PF01541 GIY-YIG catalytic domain M0M60_08410 PF02151 UvrB/uvrC motif M0M60_08410 PF08459 UvrC Helix-hairpin-helix N-terminal M0M60_08415 PF01066 CDP-alcohol phosphatidyltransferase M0M60_08535 PF00392 Bacterial regulatory proteins, gntR family M0M60_08535 PF07702 UTRA domain M0M60_08540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0M60_08540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0M60_08550 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_08555 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_08560 PF08402 TOBE domain M0M60_08560 PF00005 ABC transporter M0M60_08580 PF02796 Helix-turn-helix domain of resolvase M0M60_08580 PF00665 Integrase core domain M0M60_08585 PF01695 IstB-like ATP binding protein M0M60_08600 PF01979 Amidohydrolase family M0M60_08605 PF07702 UTRA domain M0M60_08605 PF00392 Bacterial regulatory proteins, gntR family M0M60_08610 PF01979 Amidohydrolase family M0M60_08615 PF05962 HutD M0M60_08625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0M60_08625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0M60_08630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M0M60_08630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M0M60_08635 PF01370 NAD dependent epimerase/dehydratase family M0M60_08680 PF00872 Transposase, Mutator family M0M60_08700 PF08242 Methyltransferase domain M0M60_08745 PF00512 His Kinase A (phospho-acceptor) domain M0M60_08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_08745 PF00672 HAMP domain M0M60_08750 PF00486 Transcriptional regulatory protein, C terminal M0M60_08750 PF00072 Response regulator receiver domain M0M60_08755 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M0M60_08795 PF01926 50S ribosome-binding GTPase M0M60_08795 PF06071 Protein of unknown function (DUF933) M0M60_08800 PF01195 Peptidyl-tRNA hydrolase M0M60_08805 PF10762 Protein of unknown function (DUF2583) M0M60_08810 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M0M60_08810 PF14572 Phosphoribosyl synthetase-associated domain M0M60_08815 PF00288 GHMP kinases N terminal domain M0M60_08815 PF08544 GHMP kinases C terminal M0M60_08820 PF03550 Outer membrane lipoprotein LolB M0M60_08825 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M0M60_08825 PF01488 Shikimate / quinate 5-dehydrogenase M0M60_08825 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M0M60_08830 PF03462 PCRF domain M0M60_08830 PF00472 RF-1 domain M0M60_08835 PF13847 Methyltransferase domain M0M60_08835 PF17827 PrmC N-terminal domain M0M60_08840 PF04247 Invasion gene expression up-regulator, SirB M0M60_08845 PF13369 Transglutaminase-like superfamily M0M60_08850 PF00793 DAHP synthetase I family M0M60_08855 PF01797 Transposase IS200 like M0M60_08860 PF01740 STAS domain M0M60_08860 PF00916 Sulfate permease family M0M60_08865 PF01695 IstB-like ATP binding protein M0M60_08870 PF02796 Helix-turn-helix domain of resolvase M0M60_08870 PF00665 Integrase core domain M0M60_08885 PF03009 Glycerophosphoryl diester phosphodiesterase family M0M60_08895 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_08900 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_08905 PF00005 ABC transporter M0M60_08905 PF08402 TOBE domain M0M60_08910 PF01797 Transposase IS200 like M0M60_08920 PF03009 Glycerophosphoryl diester phosphodiesterase family M0M60_08925 PF00480 ROK family M0M60_08925 PF01325 Iron dependent repressor, N-terminal DNA binding domain M0M60_08935 PF02811 PHP domain M0M60_08940 PF02613 Nitrate reductase delta subunit M0M60_08945 PF07273 Protein of unknown function (DUF1439) M0M60_08950 PF07690 Major Facilitator Superfamily M0M60_08955 PF13302 Acetyltransferase (GNAT) domain M0M60_08965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0M60_08970 PF03023 Lipid II flippase MurJ M0M60_08975 PF17287 POTRA domain M0M60_08975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0M60_08975 PF08479 POTRA domain, ShlB-type M0M60_08980 PF05860 haemagglutination activity domain M0M60_08980 PF13332 Hemagglutinin repeat M0M60_08985 PF03485 Arginyl tRNA synthetase N terminal domain M0M60_08985 PF05746 DALR anticodon binding domain M0M60_08985 PF00750 tRNA synthetases class I (R) M0M60_08990 PF06185 YecM protein M0M60_08995 PF03932 CutC family M0M60_09000 PF08003 Protein of unknown function (DUF1698) M0M60_09005 PF13649 Methyltransferase domain M0M60_09010 PF01124 MAPEG family M0M60_09015 PF01904 Protein of unknown function DUF72 M0M60_09020 PF01336 OB-fold nucleic acid binding domain M0M60_09020 PF00152 tRNA synthetases class II (D, K and N) M0M60_09020 PF02938 GAD domain M0M60_09025 PF00293 NUDIX domain M0M60_09030 PF01709 Transcriptional regulator M0M60_09035 PF02075 Crossover junction endodeoxyribonuclease RuvC M0M60_09040 PF07499 RuvA, C-terminal domain M0M60_09040 PF01330 RuvA N terminal domain M0M60_09045 PF17864 RuvB AAA lid domain M0M60_09045 PF05491 RuvB C-terminal winged helix domain M0M60_09045 PF05496 Holliday junction DNA helicase RuvB P-loop domain M0M60_09050 PF00950 ABC 3 transport family M0M60_09055 PF00005 ABC transporter M0M60_09060 PF01297 Zinc-uptake complex component A periplasmic M0M60_09065 PF08525 Opacity-associated protein A N-terminal motif M0M60_09065 PF01551 Peptidase family M23 M0M60_09065 PF01476 LysM domain M0M60_09070 PF03279 Bacterial lipid A biosynthesis acyltransferase M0M60_09080 PF00224 Pyruvate kinase, barrel domain M0M60_09080 PF02887 Pyruvate kinase, alpha/beta domain M0M60_09085 PF01418 Helix-turn-helix domain, rpiR family M0M60_09085 PF01380 SIS domain M0M60_09090 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M0M60_09090 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M0M60_09095 PF01081 KDPG and KHG aldolase M0M60_09100 PF00893 Small Multidrug Resistance protein M0M60_09105 PF00893 Small Multidrug Resistance protein M0M60_09110 PF01042 Endoribonuclease L-PSP M0M60_09115 PF13307 Helicase C-terminal domain M0M60_09115 PF04851 Type III restriction enzyme, res subunit M0M60_09120 PF00814 Glycoprotease family M0M60_09125 PF03843 Outer membrane lipoprotein Slp family M0M60_09135 PF00501 AMP-binding enzyme M0M60_09135 PF13193 AMP-binding enzyme C-terminal domain M0M60_09140 PF01612 3'-5' exonuclease M0M60_09140 PF00570 HRDC domain M0M60_09145 PF03776 Septum formation topological specificity factor MinE M0M60_09150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M0M60_09155 PF03775 Septum formation inhibitor MinC, C-terminal domain M0M60_09155 PF05209 Septum formation inhibitor MinC, N-terminal domain M0M60_09160 PF05166 YcgL domain M0M60_09170 PF13406 Transglycosylase SLT domain M0M60_09175 PF01557 Fumarylacetoacetate (FAA) hydrolase family M0M60_09180 PF03692 Putative zinc- or iron-chelating domain M0M60_09185 PF00589 Phage integrase family M0M60_09185 PF12167 Arm DNA-binding domain M0M60_09190 PF00665 Integrase core domain M0M60_09190 PF02796 Helix-turn-helix domain of resolvase M0M60_09195 PF01695 IstB-like ATP binding protein M0M60_09210 PF05772 NinB protein M0M60_09220 PF06530 Phage antitermination protein Q M0M60_09280 PF00872 Transposase, Mutator family M0M60_09365 PF01797 Transposase IS200 like M0M60_09440 PF02413 Caudovirales tail fibre assembly protein, lambda gpK M0M60_09445 PF00872 Transposase, Mutator family M0M60_09455 PF00266 Aminotransferase class-V M0M60_09475 PF02600 Disulfide bond formation protein DsbB M0M60_09480 PF06450 Bacterial Na+/H+ antiporter B (NhaB) M0M60_09485 PF07840 FadR C-terminal domain M0M60_09485 PF00392 Bacterial regulatory proteins, gntR family M0M60_09490 PF04293 SpoVR like protein M0M60_09495 PF01266 FAD dependent oxidoreductase M0M60_09505 PF02678 Pirin M0M60_09505 PF05726 Pirin C-terminal cupin domain M0M60_09510 PF03466 LysR substrate binding domain M0M60_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_09520 PF04285 Protein of unknown function (DUF444) M0M60_09525 PF06798 PrkA serine protein kinase C-terminal domain M0M60_09525 PF08298 PrkA AAA domain M0M60_09530 PF06629 MltA-interacting protein MipA M0M60_09535 PF01263 Aldose 1-epimerase M0M60_09540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M0M60_09540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M0M60_09545 PF01641 SelR domain M0M60_09550 PF07023 Protein of unknown function (DUF1315) M0M60_09555 PF00857 Isochorismatase family M0M60_09560 PF00710 Asparaginase, N-terminal M0M60_09560 PF17763 Glutaminase/Asparaginase C-terminal domain M0M60_09565 PF01343 Peptidase family S49 M0M60_09570 PF00881 Nitroreductase family M0M60_09575 PF00586 AIR synthase related protein, N-terminal domain M0M60_09575 PF02769 AIR synthase related protein, C-terminal domain M0M60_09580 PF01751 Toprim domain M0M60_09580 PF01131 DNA topoisomerase M0M60_09585 PF07383 Protein of unknown function (DUF1496) M0M60_09590 PF00293 NUDIX domain M0M60_09595 PF03372 Endonuclease/Exonuclease/phosphatase family M0M60_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_09600 PF03466 LysR substrate binding domain M0M60_09620 PF00872 Transposase, Mutator family M0M60_09625 PF00551 Formyl transferase M0M60_09625 PF01842 ACT domain M0M60_09630 PF02810 SEC-C motif M0M60_09635 PF00072 Response regulator receiver domain M0M60_09640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M0M60_09640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M0M60_09640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M0M60_09645 PF00816 H-NS histone family M0M60_09650 PF00265 Thymidine kinase M0M60_09655 PF01695 IstB-like ATP binding protein M0M60_09660 PF02796 Helix-turn-helix domain of resolvase M0M60_09660 PF00665 Integrase core domain M0M60_09665 PF00465 Iron-containing alcohol dehydrogenase M0M60_09665 PF00171 Aldehyde dehydrogenase family M0M60_09670 PF01914 MarC family integral membrane protein M0M60_09675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_09680 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_09685 PF12911 N-terminal TM domain of oligopeptide transport permease C M0M60_09685 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_09690 PF00005 ABC transporter M0M60_09690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_09695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_09695 PF00005 ABC transporter M0M60_09705 PF04269 Protein of unknown function, DUF440 M0M60_09710 PF13091 PLD-like domain M0M60_09710 PF13396 Phospholipase_D-nuclease N-terminal M0M60_09725 PF13505 Outer membrane protein beta-barrel domain M0M60_09740 PF03795 YCII-related domain M0M60_09745 PF03544 Gram-negative bacterial TonB protein C-terminal M0M60_09750 PF00872 Transposase, Mutator family M0M60_09755 PF03061 Thioesterase superfamily M0M60_09760 PF04279 Intracellular septation protein A M0M60_09785 PF03922 OmpW family M0M60_09795 PF00290 Tryptophan synthase alpha chain M0M60_09800 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_09805 PF00218 Indole-3-glycerol phosphate synthase M0M60_09805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M0M60_09815 PF00425 chorismate binding enzyme M0M60_09815 PF04715 Anthranilate synthase component I, N terminal region M0M60_09825 PF02811 PHP domain M0M60_09830 PF01300 Telomere recombination M0M60_09835 PF00849 RNA pseudouridylate synthase M0M60_09835 PF01479 S4 domain M0M60_09840 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M0M60_09845 PF00106 short chain dehydrogenase M0M60_09850 PF01343 Peptidase family S49 M0M60_09850 PF08496 Peptidase family S49 N-terminal M0M60_09855 PF10692 Protein of unknown function (DUF2498) M0M60_09865 PF01396 Topoisomerase DNA binding C4 zinc finger M0M60_09865 PF01751 Toprim domain M0M60_09865 PF01131 DNA topoisomerase M0M60_09865 PF08272 Topoisomerase I zinc-ribbon-like M0M60_09870 PF03466 LysR substrate binding domain M0M60_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_09880 PF00330 Aconitase family (aconitate hydratase) M0M60_09880 PF00694 Aconitase C-terminal domain M0M60_09885 PF00925 GTP cyclohydrolase II M0M60_09890 PF01569 PAP2 superfamily M0M60_09895 PF06305 Lipopolysaccharide assembly protein A domain M0M60_09900 PF18073 Rubredoxin metal binding domain M0M60_09910 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M0M60_09915 PF01253 Translation initiation factor SUI1 M0M60_09920 PF05433 Glycine zipper 2TM domain M0M60_09925 PF00596 Class II Aldolase and Adducin N-terminal domain M0M60_09935 PF00923 Transaldolase/Fructose-6-phosphate aldolase M0M60_09940 PF04328 Selenoprotein, putative M0M60_09945 PF02554 Carbon starvation protein CstA M0M60_09945 PF13722 5TM C-terminal transporter carbon starvation CstA M0M60_09950 PF08206 Ribonuclease B OB domain M0M60_09950 PF00773 RNB domain M0M60_09950 PF17876 Cold shock domain M0M60_09950 PF00575 S1 RNA binding domain M0M60_09955 PF07690 Major Facilitator Superfamily M0M60_09960 PF01370 NAD dependent epimerase/dehydratase family M0M60_09965 PF10576 Iron-sulfur binding domain of endonuclease III M0M60_09965 PF00633 Helix-hairpin-helix motif M0M60_09965 PF00730 HhH-GPD superfamily base excision DNA repair protein M0M60_09970 PF02508 Rnf-Nqr subunit, membrane protein M0M60_09975 PF04205 FMN-binding domain M0M60_09980 PF03116 NQR2, RnfD, RnfE family M0M60_09985 PF06445 GyrI-like small molecule binding domain M0M60_09985 PF12833 Helix-turn-helix domain M0M60_09990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M0M60_09990 PF13237 4Fe-4S dicluster domain M0M60_09990 PF13375 RnfC Barrel sandwich hybrid domain M0M60_09990 PF10531 SLBB domain M0M60_09995 PF04060 Putative Fe-S cluster M0M60_10000 PF02508 Rnf-Nqr subunit, membrane protein M0M60_10005 PF10754 Protein of unknown function (DUF2569) M0M60_10010 PF03412 Peptidase C39 family M0M60_10010 PF00005 ABC transporter M0M60_10010 PF00664 ABC transporter transmembrane region M0M60_10015 PF00664 ABC transporter transmembrane region M0M60_10015 PF00005 ABC transporter M0M60_10020 PF13533 Biotin-lipoyl like M0M60_10030 PF00005 ABC transporter M0M60_10030 PF00664 ABC transporter transmembrane region M0M60_10030 PF03412 Peptidase C39 family M0M60_10035 PF11762 L-arabinose isomerase C-terminal domain M0M60_10035 PF02610 L-arabinose isomerase M0M60_10040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_10045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M0M60_10050 PF00005 ABC transporter M0M60_10055 PF02653 Branched-chain amino acid transport system / permease component M0M60_10060 PF02311 AraC-like ligand binding domain M0M60_10060 PF12833 Helix-turn-helix domain M0M60_10065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0M60_10065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0M60_10070 PF13593 SBF-like CPA transporter family (DUF4137) M0M60_10085 PF00665 Integrase core domain M0M60_10085 PF02796 Helix-turn-helix domain of resolvase M0M60_10090 PF01695 IstB-like ATP binding protein M0M60_10100 PF01238 Phosphomannose isomerase type I M0M60_10105 PF10415 Fumarase C C-terminus M0M60_10105 PF00206 Lyase M0M60_10110 PF05472 DNA replication terminus site-binding protein (Ter protein) M0M60_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_10120 PF03466 LysR substrate binding domain M0M60_10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_10125 PF03466 LysR substrate binding domain M0M60_10130 PF00480 ROK family M0M60_10140 PF00654 Voltage gated chloride channel M0M60_10190 PF05707 Zonular occludens toxin (Zot) M0M60_10255 PF05707 Zonular occludens toxin (Zot) M0M60_10275 PF00356 Bacterial regulatory proteins, lacI family M0M60_10285 PF13407 Periplasmic binding protein domain M0M60_10290 PF09084 NMT1/THI5 like M0M60_10295 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_10300 PF00005 ABC transporter M0M60_10335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0M60_10335 PF00205 Thiamine pyrophosphate enzyme, central domain M0M60_10335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0M60_10340 PF01842 ACT domain M0M60_10345 PF13419 Haloacid dehalogenase-like hydrolase M0M60_10360 PF00245 Alkaline phosphatase M0M60_10365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M0M60_10365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M0M60_10370 PF00027 Cyclic nucleotide-binding domain M0M60_10370 PF13545 Crp-like helix-turn-helix domain M0M60_10375 PF00582 Universal stress protein family M0M60_10380 PF02233 NAD(P) transhydrogenase beta subunit M0M60_10385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M0M60_10385 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M0M60_10385 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M0M60_10395 PF07338 Protein of unknown function (DUF1471) M0M60_10400 PF13520 Amino acid permease M0M60_10410 PF00072 Response regulator receiver domain M0M60_10410 PF00486 Transcriptional regulatory protein, C terminal M0M60_10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_10415 PF00512 His Kinase A (phospho-acceptor) domain M0M60_10415 PF00672 HAMP domain M0M60_10420 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M0M60_10425 PF01797 Transposase IS200 like M0M60_10430 PF18807 Tripartite Tc toxins repeat M0M60_10430 PF14431 YwqJ-like deaminase M0M60_10445 PF04264 YceI-like domain M0M60_10450 PF01292 Prokaryotic cytochrome b561 M0M60_10460 PF00089 Trypsin M0M60_10475 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M0M60_10475 PF04408 Helicase associated domain (HA2) M0M60_10475 PF11898 Domain of unknown function (DUF3418) M0M60_10475 PF00271 Helicase conserved C-terminal domain M0M60_10475 PF00270 DEAD/DEAH box helicase M0M60_10480 PF02525 Flavodoxin-like fold M0M60_10485 PF00325 Bacterial regulatory proteins, crp family M0M60_10485 PF04198 Putative sugar-binding domain M0M60_10490 PF01232 Mannitol dehydrogenase Rossmann domain M0M60_10490 PF08125 Mannitol dehydrogenase C-terminal domain M0M60_10495 PF07027 Protein of unknown function (DUF1318) M0M60_10500 PF13617 YnbE-like lipoprotein M0M60_10505 PF11739 Dicarboxylate transport M0M60_10510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0M60_10510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0M60_10515 PF03724 META domain M0M60_10520 PF03891 Domain of unknown function (DUF333) M0M60_10525 PF02308 MgtC family M0M60_10530 PF00893 Small Multidrug Resistance protein M0M60_10535 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg M0M60_10535 PF10371 Domain of unknown function M0M60_10535 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II M0M60_10535 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase M0M60_10535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0M60_10540 PF01171 PP-loop family M0M60_10545 PF07859 alpha/beta hydrolase fold M0M60_10555 PF01544 CorA-like Mg2+ transporter protein M0M60_10560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_10565 PF00246 Zinc carboxypeptidase M0M60_10570 PF13378 Enolase C-terminal domain-like M0M60_10570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M0M60_10575 PF08534 Redoxin M0M60_10580 PF01797 Transposase IS200 like M0M60_10585 PF18024 Helix-turn-helix domain M0M60_10585 PF00158 Sigma-54 interaction domain M0M60_10590 PF09722 Protein of unknown function (DUF2384) M0M60_10595 PF08808 RES domain M0M60_10600 PF05128 Domain of unknown function (DUF697) M0M60_10605 PF04317 YcjX-like family, DUF463 M0M60_10615 PF04024 PspC domain M0M60_10620 PF06667 Phage shock protein B M0M60_10625 PF04012 PspA/IM30 family M0M60_10630 PF02954 Bacterial regulatory protein, Fis family M0M60_10630 PF00158 Sigma-54 interaction domain M0M60_10635 PF01797 Transposase IS200 like M0M60_10640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_10645 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_10650 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_10650 PF12911 N-terminal TM domain of oligopeptide transport permease C M0M60_10655 PF00005 ABC transporter M0M60_10655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_10660 PF00005 ABC transporter M0M60_10670 PF00854 POT family M0M60_10675 PF04893 Yip1 domain M0M60_10680 PF11656 YjbD family (DUF3811) M0M60_10685 PF01695 IstB-like ATP binding protein M0M60_10690 PF00665 Integrase core domain M0M60_10690 PF02796 Helix-turn-helix domain of resolvase M0M60_10695 PF02798 Glutathione S-transferase, N-terminal domain M0M60_10695 PF00043 Glutathione S-transferase, C-terminal domain M0M60_10700 PF08543 Phosphomethylpyrimidine kinase M0M60_10705 PF01479 S4 domain M0M60_10705 PF00579 tRNA synthetases class I (W and Y) M0M60_10710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M0M60_10710 PF01243 Pyridoxamine 5'-phosphate oxidase M0M60_10715 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme M0M60_10730 PF06945 Protein of unknown function (DUF1289) M0M60_10735 PF08019 Phosphoethanolamine transferase EptA/EptB M0M60_10735 PF00884 Sulfatase M0M60_10740 PF16925 Tetracyclin repressor-like, C-terminal domain M0M60_10740 PF00440 Bacterial regulatory proteins, tetR family M0M60_10745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0M60_10750 PF14431 YwqJ-like deaminase M0M60_10750 PF18807 Tripartite Tc toxins repeat M0M60_10755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0M60_10760 PF00929 Exonuclease M0M60_10770 PF00462 Glutaredoxin M0M60_10775 PF00877 NlpC/P60 family M0M60_10780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M0M60_10780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M0M60_10790 PF00356 Bacterial regulatory proteins, lacI family M0M60_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_10795 PF03466 LysR substrate binding domain M0M60_10800 PF07690 Major Facilitator Superfamily M0M60_10810 PF00677 Lumazine binding domain M0M60_10815 PF01554 MatE M0M60_10830 PF02887 Pyruvate kinase, alpha/beta domain M0M60_10830 PF00224 Pyruvate kinase, barrel domain M0M60_10835 PF04728 Lipoprotein leucine-zipper M0M60_10840 PF01797 Transposase IS200 like M0M60_10845 PF02796 Helix-turn-helix domain of resolvase M0M60_10845 PF00665 Integrase core domain M0M60_10850 PF01695 IstB-like ATP binding protein M0M60_10855 PF17969 L,D-transpeptidase C-terminal domain M0M60_10855 PF01476 LysM domain M0M60_10855 PF03734 L,D-transpeptidase catalytic domain M0M60_10860 PF02657 Fe-S metabolism associated domain M0M60_10865 PF00266 Aminotransferase class-V M0M60_10870 PF01458 Uncharacterized protein family (UPF0051) M0M60_10875 PF00005 ABC transporter M0M60_10880 PF01458 Uncharacterized protein family (UPF0051) M0M60_10885 PF01521 Iron-sulphur cluster biosynthesis M0M60_10890 PF03061 Thioesterase superfamily M0M60_10895 PF01565 FAD binding domain M0M60_10895 PF02913 FAD linked oxidases, C-terminal domain M0M60_10895 PF13183 4Fe-4S dicluster domain M0M60_10900 PF01594 AI-2E family transporter M0M60_10910 PF02896 PEP-utilising enzyme, TIM barrel domain M0M60_10910 PF00391 PEP-utilising enzyme, mobile domain M0M60_10910 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M0M60_10915 PF03618 Kinase/pyrophosphorylase M0M60_10920 PF00793 DAHP synthetase I family M0M60_10930 PF03099 Biotin/lipoate A/B protein ligase family M0M60_10930 PF10437 Bacterial lipoate protein ligase C-terminus M0M60_10935 PF00877 NlpC/P60 family M0M60_10950 PF00892 EamA-like transporter family M0M60_10955 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M0M60_10960 PF01522 Polysaccharide deacetylase M0M60_10965 PF01370 NAD dependent epimerase/dehydratase family M0M60_10965 PF02911 Formyl transferase, C-terminal domain M0M60_10965 PF00551 Formyl transferase M0M60_10970 PF00535 Glycosyl transferase family 2 M0M60_10975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M0M60_10980 PF00005 ABC transporter M0M60_10985 PF00255 Glutathione peroxidase M0M60_10990 PF01032 FecCD transport family M0M60_11000 PF00216 Bacterial DNA-binding protein M0M60_11005 PF03483 B3/4 domain M0M60_11005 PF03147 Ferredoxin-fold anticodon binding domain M0M60_11005 PF01588 Putative tRNA binding domain M0M60_11005 PF03484 tRNA synthetase B5 domain M0M60_11005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M0M60_11010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M0M60_11010 PF01409 tRNA synthetases class II core domain (F) M0M60_11015 PF00453 Ribosomal protein L20 M0M60_11020 PF01632 Ribosomal protein L35 M0M60_11025 PF00707 Translation initiation factor IF-3, C-terminal domain M0M60_11025 PF05198 Translation initiation factor IF-3, N-terminal domain M0M60_11030 PF03129 Anticodon binding domain M0M60_11030 PF02824 TGS domain M0M60_11030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0M60_11030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M0M60_11035 PF13619 KTSC domain M0M60_11045 PF01914 MarC family integral membrane protein M0M60_11050 PF01464 Transglycosylase SLT domain M0M60_11055 PF01297 Zinc-uptake complex component A periplasmic M0M60_11060 PF00005 ABC transporter M0M60_11065 PF00950 ABC 3 transport family M0M60_11070 PF00950 ABC 3 transport family M0M60_11080 PF03881 Fructosamine kinase M0M60_11085 PF14002 YniB-like protein M0M60_11090 PF13419 Haloacid dehalogenase-like hydrolase M0M60_11095 PF00872 Transposase, Mutator family M0M60_11100 PF01266 FAD dependent oxidoreductase M0M60_11105 PF00196 Bacterial regulatory proteins, luxR family M0M60_11115 PF01594 AI-2E family transporter M0M60_11120 PF00581 Rhodanese-like domain M0M60_11120 PF12368 Rhodanase C-terminal M0M60_11120 PF17773 UPF0176 acylphosphatase like domain M0M60_11135 PF00765 Autoinducer synthase M0M60_11140 PF00196 Bacterial regulatory proteins, luxR family M0M60_11140 PF03472 Autoinducer binding domain M0M60_11145 PF03466 LysR substrate binding domain M0M60_11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_11150 PF00083 Sugar (and other) transporter M0M60_11160 PF00248 Aldo/keto reductase family M0M60_11165 PF09618 CRISPR-associated protein (Cas_Csy4) M0M60_11170 PF09615 CRISPR-associated protein (Cas_Csy3) M0M60_11175 PF09614 CRISPR-associated protein (Cas_Csy2) M0M60_11180 PF09611 CRISPR-associated protein (Cas_Csy1) M0M60_11190 PF01867 CRISPR associated protein Cas1 M0M60_11195 PF00924 Mechanosensitive ion channel M0M60_11215 PF04041 beta-1,4-mannooligosaccharide phosphorylase M0M60_11220 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_11225 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_11235 PF00356 Bacterial regulatory proteins, lacI family M0M60_11240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0M60_11240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0M60_11240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0M60_11240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0M60_11245 PF00005 ABC transporter M0M60_11245 PF17912 MalK OB fold domain M0M60_11255 PF04829 Pre-toxin domain with VENN motif M0M60_11255 PF05594 Haemagluttinin repeat M0M60_11255 PF13332 Hemagglutinin repeat M0M60_11255 PF05860 haemagglutination activity domain M0M60_11255 PF15526 Novel toxin 21 M0M60_11280 PF04829 Pre-toxin domain with VENN motif M0M60_11280 PF15526 Novel toxin 21 M0M60_11280 PF05860 haemagglutination activity domain M0M60_11280 PF13332 Hemagglutinin repeat M0M60_11280 PF05594 Haemagluttinin repeat M0M60_11300 PF13332 Hemagglutinin repeat M0M60_11300 PF04829 Pre-toxin domain with VENN motif M0M60_11300 PF13018 Extended Signal Peptide of Type V secretion system M0M60_11300 PF05860 haemagglutination activity domain M0M60_11305 PF08479 POTRA domain, ShlB-type M0M60_11305 PF17287 POTRA domain M0M60_11305 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0M60_11310 PF00175 Oxidoreductase NAD-binding domain M0M60_11310 PF00970 Oxidoreductase FAD-binding domain M0M60_11310 PF00111 2Fe-2S iron-sulfur cluster binding domain M0M60_11315 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M0M60_11315 PF00355 Rieske [2Fe-2S] domain M0M60_11320 PF02028 BCCT, betaine/carnitine/choline family transporter M0M60_11330 PF00180 Isocitrate/isopropylmalate dehydrogenase M0M60_11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_11335 PF03466 LysR substrate binding domain M0M60_11340 PF00356 Bacterial regulatory proteins, lacI family M0M60_11345 PF02653 Branched-chain amino acid transport system / permease component M0M60_11350 PF00005 ABC transporter M0M60_11355 PF13407 Periplasmic binding protein domain M0M60_11360 PF08240 Alcohol dehydrogenase GroES-like domain M0M60_11360 PF00107 Zinc-binding dehydrogenase M0M60_11380 PF13505 Outer membrane protein beta-barrel domain M0M60_11385 PF00892 EamA-like transporter family M0M60_11395 PF13649 Methyltransferase domain M0M60_11400 PF00210 Ferritin-like domain M0M60_11410 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_11415 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_11420 PF00005 ABC transporter M0M60_11425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0M60_11425 PF13426 PAS domain M0M60_11425 PF08447 PAS fold M0M60_11430 PF02796 Helix-turn-helix domain of resolvase M0M60_11430 PF00665 Integrase core domain M0M60_11435 PF01695 IstB-like ATP binding protein M0M60_11450 PF05971 RNA methyltransferase M0M60_11455 PF07338 Protein of unknown function (DUF1471) M0M60_11465 PF02885 Glycosyl transferase family, helical bundle domain M0M60_11470 PF00501 AMP-binding enzyme M0M60_11470 PF13193 AMP-binding enzyme C-terminal domain M0M60_11475 PF13378 Enolase C-terminal domain-like M0M60_11480 PF00378 Enoyl-CoA hydratase/isomerase M0M60_11485 PF12697 Alpha/beta hydrolase family M0M60_11490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0M60_11490 PF16582 Middle domain of thiamine pyrophosphate M0M60_11490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0M60_11495 PF00425 chorismate binding enzyme M0M60_11505 PF05957 Bacterial protein of unknown function (DUF883) M0M60_11510 PF00920 Dehydratase family M0M60_11515 PF03928 Haem-degrading M0M60_11520 PF07690 Major Facilitator Superfamily M0M60_11525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0M60_11525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0M60_11530 PF00356 Bacterial regulatory proteins, lacI family M0M60_11535 PF02638 Glycosyl hydrolase-like 10 M0M60_11540 PF00106 short chain dehydrogenase M0M60_11545 PF01202 Shikimate kinase M0M60_11550 PF04074 YhcH/YjgK/YiaL M0M60_11560 PF00361 Proton-conducting membrane transporter M0M60_11565 PF00361 Proton-conducting membrane transporter M0M60_11570 PF00361 Proton-conducting membrane transporter M0M60_11570 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M0M60_11575 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M0M60_11580 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M0M60_11585 PF12838 4Fe-4S dicluster domain M0M60_11590 PF00146 NADH dehydrogenase M0M60_11595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0M60_11595 PF00384 Molybdopterin oxidoreductase M0M60_11595 PF01568 Molydopterin dinucleotide binding domain M0M60_11595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M0M60_11600 PF10531 SLBB domain M0M60_11600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M0M60_11600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M0M60_11625 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M0M60_11630 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M0M60_11635 PF03466 LysR substrate binding domain M0M60_11635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_11640 PF00155 Aminotransferase class I and II M0M60_11655 PF03600 Citrate transporter M0M60_11655 PF02080 TrkA-C domain M0M60_11660 PF13419 Haloacid dehalogenase-like hydrolase M0M60_11665 PF03887 YfbU domain M0M60_11670 PF04217 Protein of unknown function, DUF412 M0M60_11675 PF00871 Acetokinase family M0M60_11680 PF07085 DRTGG domain M0M60_11680 PF01515 Phosphate acetyl/butaryl transferase M0M60_11690 PF00356 Bacterial regulatory proteins, lacI family M0M60_11690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M0M60_11695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0M60_11705 PF00872 Transposase, Mutator family M0M60_11710 PF06832 Penicillin-Binding Protein C-terminus Family M0M60_11710 PF00912 Transglycosylase M0M60_11710 PF00905 Penicillin binding protein transpeptidase domain M0M60_11715 PF17962 Bacterial macroglobulin domain 6 M0M60_11715 PF00207 Alpha-2-macroglobulin family M0M60_11715 PF01835 MG2 domain M0M60_11715 PF07703 Alpha-2-macroglobulin bait region domain M0M60_11715 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain M0M60_11715 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain M0M60_11715 PF11974 Bacterial alpha-2-macroglobulin MG3 domain M0M60_11730 PF00171 Aldehyde dehydrogenase family M0M60_11735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0M60_11735 PF00205 Thiamine pyrophosphate enzyme, central domain M0M60_11735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0M60_11745 PF13407 Periplasmic binding protein domain M0M60_11750 PF00005 ABC transporter M0M60_11755 PF02653 Branched-chain amino acid transport system / permease component M0M60_11760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0M60_11760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M0M60_11765 PF00294 pfkB family carbohydrate kinase M0M60_11770 PF01261 Xylose isomerase-like TIM barrel M0M60_11775 PF04962 KduI/IolB family M0M60_11785 PF00664 ABC transporter transmembrane region M0M60_11785 PF00005 ABC transporter M0M60_11810 PF00196 Bacterial regulatory proteins, luxR family M0M60_11820 PF00313 'Cold-shock' DNA-binding domain M0M60_11825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M0M60_11830 PF02416 mttA/Hcf106 family M0M60_11835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M0M60_11835 PF04055 Radical SAM superfamily M0M60_11840 PF03099 Biotin/lipoate A/B protein ligase family M0M60_11845 PF04359 Protein of unknown function (DUF493) M0M60_11850 PF07943 Penicillin-binding protein 5, C-terminal domain M0M60_11850 PF00768 D-alanyl-D-alanine carboxypeptidase M0M60_11855 PF03330 Lytic transglycolase M0M60_11855 PF05036 Sporulation related domain M0M60_11860 PF01098 Cell cycle protein M0M60_11865 PF03717 Penicillin-binding Protein dimerisation domain M0M60_11865 PF00905 Penicillin binding protein transpeptidase domain M0M60_11870 PF02590 Predicted SPOUT methyltransferase M0M60_11880 PF01467 Cytidylyltransferase-like M0M60_11885 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M0M60_11885 PF06144 DNA polymerase III, delta subunit M0M60_11890 PF04390 Lipopolysaccharide-assembly M0M60_11895 PF00133 tRNA synthetases class I (I, L, M and V) M0M60_11895 PF08264 Anticodon-binding domain of tRNA M0M60_11895 PF13603 Leucyl-tRNA synthetase, Domain 2 M0M60_11900 PF07295 Zinc-ribbon containing domain M0M60_11905 PF00005 ABC transporter M0M60_11910 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_11915 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_11920 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_11925 PF00795 Carbon-nitrogen hydrolase M0M60_11930 PF03471 Transporter associated domain M0M60_11930 PF00571 CBS domain M0M60_11935 PF02130 Uncharacterized protein family UPF0054 M0M60_11940 PF02562 PhoH-like protein M0M60_11945 PF00919 Uncharacterized protein family UPF0004 M0M60_11945 PF04055 Radical SAM superfamily M0M60_11945 PF01938 TRAM domain M0M60_11950 PF01494 FAD binding domain M0M60_11980 PF00733 Asparagine synthase M0M60_11980 PF13537 Glutamine amidotransferase domain M0M60_11985 PF13344 Haloacid dehalogenase-like hydrolase M0M60_11990 PF01047 MarR family M0M60_11990 PF00480 ROK family M0M60_11995 PF01979 Amidohydrolase family M0M60_12000 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M0M60_12005 PF00367 phosphotransferase system, EIIB M0M60_12005 PF02378 Phosphotransferase system, EIIC M0M60_12005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M0M60_12010 PF01797 Transposase IS200 like M0M60_12015 PF00749 tRNA synthetases class I (E and Q), catalytic domain M0M60_12015 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M0M60_12020 PF03573 outer membrane porin, OprD family M0M60_12030 PF01475 Ferric uptake regulator family M0M60_12035 PF00258 Flavodoxin M0M60_12045 PF01402 Ribbon-helix-helix protein, copG family M0M60_12050 PF12697 Alpha/beta hydrolase family M0M60_12060 PF13356 Arm DNA-binding domain M0M60_12060 PF00589 Phage integrase family M0M60_12075 PF01695 IstB-like ATP binding protein M0M60_12080 PF02796 Helix-turn-helix domain of resolvase M0M60_12080 PF00665 Integrase core domain M0M60_12090 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M0M60_12095 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_12100 PF00005 ABC transporter M0M60_12100 PF00571 CBS domain M0M60_12105 PF00268 Ribonucleotide reductase, small chain M0M60_12110 PF02867 Ribonucleotide reductase, barrel domain M0M60_12110 PF00317 Ribonucleotide reductase, all-alpha domain M0M60_12110 PF08343 Ribonucleotide reductase N-terminal M0M60_12115 PF07972 NrdI Flavodoxin like M0M60_12125 PF06392 Acid shock protein repeat M0M60_12130 PF09400 Protein of unknown function (DUF2002) M0M60_12135 PF06711 Protein of unknown function (DUF1198) M0M60_12140 PF00872 Transposase, Mutator family M0M60_12150 PF00313 'Cold-shock' DNA-binding domain M0M60_12155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_12160 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_12165 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_12165 PF12911 N-terminal TM domain of oligopeptide transport permease C M0M60_12170 PF00005 ABC transporter M0M60_12175 PF00005 ABC transporter M0M60_12180 PF00547 Urease, gamma subunit M0M60_12185 PF00699 Urease beta subunit M0M60_12190 PF01979 Amidohydrolase family M0M60_12190 PF00449 Urease alpha-subunit, N-terminal domain M0M60_12195 PF02814 UreE urease accessory protein, N-terminal domain M0M60_12195 PF05194 UreE urease accessory protein, C-terminal domain M0M60_12200 PF01730 UreF M0M60_12205 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0M60_12210 PF01774 UreD urease accessory protein M0M60_12215 PF01774 UreD urease accessory protein M0M60_12220 PF03253 Urea transporter M0M60_12225 PF03824 High-affinity nickel-transport protein M0M60_12230 PF06411 HdeA/HdeB family M0M60_12235 PF07885 Ion channel M0M60_12235 PF02254 TrkA-N domain M0M60_12240 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M0M60_12245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M0M60_12255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0M60_12260 PF02378 Phosphotransferase system, EIIC M0M60_12265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M0M60_12270 PF07883 Cupin domain M0M60_12270 PF12833 Helix-turn-helix domain M0M60_12275 PF04794 YdjC-like protein M0M60_12285 PF17206 SeqA protein N-terminal domain M0M60_12285 PF03925 SeqA protein C-terminal domain M0M60_12290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M0M60_12290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M0M60_12290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M0M60_12290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M0M60_12305 PF00072 Response regulator receiver domain M0M60_12305 PF00486 Transcriptional regulatory protein, C terminal M0M60_12310 PF13493 Domain of unknown function (DUF4118) M0M60_12310 PF13492 GAF domain M0M60_12310 PF00512 His Kinase A (phospho-acceptor) domain M0M60_12310 PF02702 Osmosensitive K+ channel His kinase sensor domain M0M60_12310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_12315 PF02669 K+-transporting ATPase, c chain M0M60_12325 PF03814 Potassium-transporting ATPase A subunit M0M60_12340 PF10725 Protein of unknown function (DUF2517) M0M60_12345 PF08349 Protein of unknown function (DUF1722) M0M60_12350 PF03441 FAD binding domain of DNA photolyase M0M60_12350 PF00875 DNA photolyase M0M60_12355 PF02112 cAMP phosphodiesterases class-II M0M60_12360 PF01784 NIF3 (NGG1p interacting factor 3) M0M60_12375 PF02626 Carboxyltransferase domain, subdomain A and B M0M60_12380 PF03746 LamB/YcsF family M0M60_12395 PF01470 Pyroglutamyl peptidase M0M60_12400 PF03167 Uracil DNA glycosylase superfamily M0M60_12405 PF01228 Glycine radical M0M60_12415 PF12796 Ankyrin repeats (3 copies) M0M60_12420 PF00270 DEAD/DEAH box helicase M0M60_12420 PF00271 Helicase conserved C-terminal domain M0M60_12425 PF05175 Methyltransferase small domain M0M60_12435 PF02910 Fumarate reductase flavoprotein C-term M0M60_12435 PF00890 FAD binding domain M0M60_12440 PF04542 Sigma-70 region 2 M0M60_12440 PF08281 Sigma-70, region 4 M0M60_12445 PF03873 Anti sigma-E protein RseA, C-terminal domain M0M60_12445 PF03872 Anti sigma-E protein RseA, N-terminal domain M0M60_12450 PF03888 MucB/RseB N-terminal domain M0M60_12450 PF17188 MucB/RseB C-terminal domain M0M60_12465 PF00679 Elongation factor G C-terminus M0M60_12465 PF00009 Elongation factor Tu GTP binding domain M0M60_12465 PF03144 Elongation factor Tu domain 2 M0M60_12465 PF06421 GTP-binding protein LepA C-terminus M0M60_12470 PF10502 Signal peptidase, peptidase S26 M0M60_12475 PF00035 Double-stranded RNA binding motif M0M60_12475 PF14622 Ribonuclease-III-like M0M60_12480 PF07650 KH domain M0M60_12480 PF01926 50S ribosome-binding GTPase M0M60_12485 PF02565 Recombination protein O C terminal M0M60_12485 PF11967 Recombination protein O N terminal M0M60_12490 PF00665 Integrase core domain M0M60_12490 PF02796 Helix-turn-helix domain of resolvase M0M60_12495 PF01695 IstB-like ATP binding protein M0M60_12505 PF06744 Type VI secretion protein IcmF C-terminal M0M60_12505 PF14331 ImcF-related N-terminal domain M0M60_12505 PF06761 Intracellular multiplication and human macrophage-killing M0M60_12510 PF04717 Type VI secretion system, phage-baseplate injector M0M60_12525 PF07024 ImpE protein M0M60_12540 PF03831 PhnA domain M0M60_12540 PF08274 PhnA Zinc-Ribbon M0M60_12550 PF04011 LemA family M0M60_12565 PF00005 ABC transporter M0M60_12570 PF03379 CcmB protein M0M60_12575 PF01578 Cytochrome C assembly protein M0M60_12580 PF04995 Heme exporter protein D (CcmD) M0M60_12585 PF03100 CcmE M0M60_12590 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M0M60_12590 PF01578 Cytochrome C assembly protein M0M60_12595 PF08534 Redoxin M0M60_12600 PF03918 Cytochrome C biogenesis protein M0M60_12605 PF03918 Cytochrome C biogenesis protein M0M60_12610 PF04333 MlaA lipoprotein M0M60_12615 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M0M60_12620 PF04175 Protein of unknown function (DUF406) M0M60_12625 PF02803 Thiolase, C-terminal domain M0M60_12625 PF00108 Thiolase, N-terminal domain M0M60_12630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M0M60_12630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M0M60_12630 PF00378 Enoyl-CoA hydratase/isomerase M0M60_12635 PF00300 Histidine phosphatase superfamily (branch 1) M0M60_12640 PF01713 Smr domain M0M60_12645 PF05175 Methyltransferase small domain M0M60_12650 PF01264 Chorismate synthase M0M60_12655 PF03411 Penicillin-insensitive murein endopeptidase M0M60_12660 PF01925 Sulfite exporter TauE/SafE M0M60_12665 PF04315 Elongation factor P hydroxylase M0M60_12670 PF08891 YfcL protein M0M60_12675 PF01266 FAD dependent oxidoreductase M0M60_12675 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M0M60_12680 PF00109 Beta-ketoacyl synthase, N-terminal domain M0M60_12680 PF02801 Beta-ketoacyl synthase, C-terminal domain M0M60_12690 PF01177 Asp/Glu/Hydantoin racemase M0M60_12695 PF00419 Fimbrial protein M0M60_12705 PF00892 EamA-like transporter family M0M60_12715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0M60_12715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0M60_12715 PF11890 Domain of unknown function (DUF3410) M0M60_12720 PF01797 Transposase IS200 like M0M60_12725 PF01118 Semialdehyde dehydrogenase, NAD binding domain M0M60_12725 PF02774 Semialdehyde dehydrogenase, dimerisation domain M0M60_12730 PF01416 tRNA pseudouridine synthase M0M60_12735 PF09335 SNARE associated Golgi protein M0M60_12740 PF01039 Carboxyl transferase domain M0M60_12740 PF17848 Acetyl-coA carboxylase zinc finger domain M0M60_12745 PF02875 Mur ligase family, glutamate ligase domain M0M60_12745 PF08245 Mur ligase middle domain M0M60_12750 PF05036 Sporulation related domain M0M60_12755 PF02674 Colicin V production protein M0M60_12760 PF00156 Phosphoribosyl transferase domain M0M60_12765 PF02441 Flavoprotein M0M60_12770 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_12775 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_12780 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_12785 PF00005 ABC transporter M0M60_12790 PF08338 Domain of unknown function (DUF1731) M0M60_12790 PF01370 NAD dependent epimerase/dehydratase family M0M60_12805 PF00293 NUDIX domain M0M60_12810 PF03611 PTS system sugar-specific permease component M0M60_12815 PF00872 Transposase, Mutator family M0M60_12825 PF13693 Winged helix-turn-helix DNA-binding M0M60_12845 PF05638 Type VI secretion system effector, Hcp M0M60_12860 PF16168 Adhesin of bacterial autotransporter system, probable stalk M0M60_12860 PF03797 Autotransporter beta-domain M0M60_12860 PF13018 Extended Signal Peptide of Type V secretion system M0M60_12860 PF03212 Pertactin M0M60_12880 PF00872 Transposase, Mutator family M0M60_12895 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0M60_12895 PF14310 Fibronectin type III-like domain M0M60_12895 PF00933 Glycosyl hydrolase family 3 N terminal domain M0M60_12910 PF00248 Aldo/keto reductase family M0M60_12915 PF00248 Aldo/keto reductase family M0M60_12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_12920 PF03466 LysR substrate binding domain M0M60_12925 PF00665 Integrase core domain M0M60_12925 PF02796 Helix-turn-helix domain of resolvase M0M60_12930 PF01695 IstB-like ATP binding protein M0M60_12945 PF00782 Dual specificity phosphatase, catalytic domain M0M60_12950 PF12146 Serine aminopeptidase, S33 M0M60_12950 PF12147 Putative methyltransferase M0M60_12955 PF01553 Acyltransferase M0M60_12965 PF01066 CDP-alcohol phosphatidyltransferase M0M60_13005 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M0M60_13005 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M0M60_13015 PF01797 Transposase IS200 like M0M60_13025 PF00586 AIR synthase related protein, N-terminal domain M0M60_13025 PF02769 AIR synthase related protein, C-terminal domain M0M60_13030 PF00551 Formyl transferase M0M60_13035 PF13302 Acetyltransferase (GNAT) domain M0M60_13050 PF00005 ABC transporter M0M60_13055 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13060 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13065 PF17941 Polyphosphate kinase C-terminal domain 1 M0M60_13065 PF13090 Polyphosphate kinase C-terminal domain 2 M0M60_13065 PF02503 Polyphosphate kinase middle domain M0M60_13065 PF13089 Polyphosphate kinase N-terminal domain M0M60_13070 PF02541 Ppx/GppA phosphatase family M0M60_13080 PF03448 MgtE intracellular N domain M0M60_13080 PF01769 Divalent cation transporter M0M60_13080 PF00571 CBS domain M0M60_13085 PF00012 Hsp70 protein M0M60_13090 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13095 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13105 PF00202 Aminotransferase class-III M0M60_13110 PF00392 Bacterial regulatory proteins, gntR family M0M60_13110 PF00155 Aminotransferase class I and II M0M60_13115 PF08402 TOBE domain M0M60_13115 PF00005 ABC transporter M0M60_13120 PF13533 Biotin-lipoyl like M0M60_13125 PF00873 AcrB/AcrD/AcrF family M0M60_13130 PF00873 AcrB/AcrD/AcrF family M0M60_13135 PF07690 Major Facilitator Superfamily M0M60_13140 PF00672 HAMP domain M0M60_13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_13140 PF00512 His Kinase A (phospho-acceptor) domain M0M60_13145 PF00672 HAMP domain M0M60_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_13145 PF00512 His Kinase A (phospho-acceptor) domain M0M60_13150 PF00072 Response regulator receiver domain M0M60_13150 PF00486 Transcriptional regulatory protein, C terminal M0M60_13155 PF07411 Domain of unknown function (DUF1508) M0M60_13160 PF01136 Peptidase family U32 M0M60_13160 PF16325 Peptidase family U32 C-terminal domain M0M60_13165 PF00781 Diacylglycerol kinase catalytic domain M0M60_13185 PF08543 Phosphomethylpyrimidine kinase M0M60_13200 PF00872 Transposase, Mutator family M0M60_13230 PF05638 Type VI secretion system effector, Hcp M0M60_13235 PF01797 Transposase IS200 like M0M60_13240 PF00117 Glutamine amidotransferase class-I M0M60_13240 PF02540 NAD synthase M0M60_13240 PF00958 GMP synthase C terminal domain M0M60_13245 PF00478 IMP dehydrogenase / GMP reductase domain M0M60_13245 PF00571 CBS domain M0M60_13250 PF02601 Exonuclease VII, large subunit M0M60_13250 PF13742 OB-fold nucleic acid binding domain M0M60_13255 PF07191 zinc-ribbons M0M60_13265 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M0M60_13265 PF01926 50S ribosome-binding GTPase M0M60_13270 PF13360 PQQ-like domain M0M60_13275 PF09976 Tetratricopeptide repeat-like domain M0M60_13280 PF03129 Anticodon binding domain M0M60_13280 PF13393 Histidyl-tRNA synthetase M0M60_13285 PF04551 GcpE protein M0M60_13290 PF13464 Domain of unknown function (DUF4115) M0M60_13300 PF04055 Radical SAM superfamily M0M60_13305 PF00334 Nucleoside diphosphate kinase M0M60_13315 PF16168 Adhesin of bacterial autotransporter system, probable stalk M0M60_13315 PF03797 Autotransporter beta-domain M0M60_13315 PF03212 Pertactin M0M60_13330 PF07179 SseB protein N-terminal domain M0M60_13330 PF14581 SseB protein C-terminal domain M0M60_13335 PF00883 Cytosol aminopeptidase family, catalytic domain M0M60_13335 PF12404 Peptidase M0M60_13340 PF04384 Iron-sulphur cluster assembly M0M60_13345 PF00111 2Fe-2S iron-sulfur cluster binding domain M0M60_13350 PF00012 Hsp70 protein M0M60_13355 PF00226 DnaJ domain M0M60_13355 PF07743 HSCB C-terminal oligomerisation domain M0M60_13360 PF01521 Iron-sulphur cluster biosynthesis M0M60_13365 PF01592 NifU-like N terminal domain M0M60_13370 PF00266 Aminotransferase class-V M0M60_13375 PF02082 Transcriptional regulator M0M60_13380 PF00588 SpoU rRNA Methylase family M0M60_13385 PF00459 Inositol monophosphatase family M0M60_13390 PF01797 Transposase IS200 like M0M60_13395 PF03824 High-affinity nickel-transport protein M0M60_13400 PF06226 Protein of unknown function (DUF1007) M0M60_13405 PF00874 PRD domain M0M60_13410 PF12832 MFS_1 like family M0M60_13415 PF13505 Outer membrane protein beta-barrel domain M0M60_13425 PF00464 Serine hydroxymethyltransferase M0M60_13430 PF00042 Globin M0M60_13430 PF00970 Oxidoreductase FAD-binding domain M0M60_13430 PF00175 Oxidoreductase NAD-binding domain M0M60_13440 PF00543 Nitrogen regulatory protein P-II M0M60_13445 PF02540 NAD synthase M0M60_13445 PF00795 Carbon-nitrogen hydrolase M0M60_13450 PF00158 Sigma-54 interaction domain M0M60_13450 PF00072 Response regulator receiver domain M0M60_13455 PF13942 YfhG lipoprotein M0M60_13460 PF00512 His Kinase A (phospho-acceptor) domain M0M60_13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_13465 PF01797 Transposase IS200 like M0M60_13490 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M0M60_13490 PF02769 AIR synthase related protein, C-terminal domain M0M60_13490 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M0M60_13495 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_13495 PF01464 Transglycosylase SLT domain M0M60_13500 PF14437 MafB19-like deaminase M0M60_13510 PF01380 SIS domain M0M60_13515 PF01418 Helix-turn-helix domain, rpiR family M0M60_13515 PF01380 SIS domain M0M60_13520 PF12838 4Fe-4S dicluster domain M0M60_13525 PF01797 Transposase IS200 like M0M60_13530 PF01648 4'-phosphopantetheinyl transferase superfamily M0M60_13535 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M0M60_13540 PF01695 IstB-like ATP binding protein M0M60_13545 PF00665 Integrase core domain M0M60_13545 PF02796 Helix-turn-helix domain of resolvase M0M60_13555 PF05958 tRNA (Uracil-5-)-methyltransferase M0M60_13560 PF10767 Protein of unknown function (DUF2593) M0M60_13565 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13570 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13575 PF00005 ABC transporter M0M60_13575 PF08402 TOBE domain M0M60_13580 PF13416 Bacterial extracellular solute-binding protein M0M60_13585 PF10722 Putative bacterial sensory transduction regulator M0M60_13590 PF07214 Protein of unknown function (DUF1418) M0M60_13595 PF00462 Glutaredoxin M0M60_13600 PF02080 TrkA-C domain M0M60_13600 PF06826 Predicted Permease Membrane Region M0M60_13610 PF01569 PAP2 superfamily M0M60_13615 PF01791 DeoC/LacD family aldolase M0M60_13620 PF00455 DeoR C terminal sensor domain M0M60_13620 PF08220 DeoR-like helix-turn-helix domain M0M60_13630 PF07943 Penicillin-binding protein 5, C-terminal domain M0M60_13630 PF00768 D-alanyl-D-alanine carboxypeptidase M0M60_13635 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13640 PF09383 NIL domain M0M60_13640 PF00005 ABC transporter M0M60_13645 PF03180 NLPA lipoprotein M0M60_13660 PF00043 Glutathione S-transferase, C-terminal domain M0M60_13660 PF13417 Glutathione S-transferase, N-terminal domain M0M60_13665 PF07715 TonB-dependent Receptor Plug Domain M0M60_13665 PF00593 TonB dependent receptor M0M60_13670 PF00005 ABC transporter M0M60_13675 PF01032 FecCD transport family M0M60_13685 PF00324 Amino acid permease M0M60_13690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_13690 PF03466 LysR substrate binding domain M0M60_13695 PF03601 Conserved hypothetical protein 698 M0M60_13700 PF01261 Xylose isomerase-like TIM barrel M0M60_13705 PF00577 Outer membrane usher protein M0M60_13705 PF13953 PapC C-terminal domain M0M60_13705 PF13954 PapC N-terminal domain M0M60_13710 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_13710 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_13720 PF17550 Family of unknown function M0M60_13725 PF00486 Transcriptional regulatory protein, C terminal M0M60_13730 PF02378 Phosphotransferase system, EIIC M0M60_13730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0M60_13735 PF00294 pfkB family carbohydrate kinase M0M60_13740 PF00381 PTS HPr component phosphorylation site M0M60_13740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0M60_13745 PF00293 NUDIX domain M0M60_13750 PF02653 Branched-chain amino acid transport system / permease component M0M60_13755 PF00005 ABC transporter M0M60_13765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M0M60_13770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_13770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_13775 PF00171 Aldehyde dehydrogenase family M0M60_13785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0M60_13785 PF01842 ACT domain M0M60_13785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0M60_13795 PF03692 Putative zinc- or iron-chelating domain M0M60_13800 PF03222 Tryptophan/tyrosine permease family M0M60_13805 PF01132 Elongation factor P (EF-P) OB domain M0M60_13805 PF09285 Elongation factor P, C-terminal M0M60_13805 PF08207 Elongation factor P (EF-P) KOW-like domain M0M60_13810 PF03786 D-mannonate dehydratase (UxuA) M0M60_13815 PF01232 Mannitol dehydrogenase Rossmann domain M0M60_13815 PF08125 Mannitol dehydrogenase C-terminal domain M0M60_13820 PF07729 FCD domain M0M60_13820 PF00392 Bacterial regulatory proteins, gntR family M0M60_13825 PF02492 CobW/HypB/UreG, nucleotide-binding domain M0M60_13825 PF07683 Cobalamin synthesis protein cobW C-terminal domain M0M60_13830 PF01569 PAP2 superfamily M0M60_13835 PF00877 NlpC/P60 family M0M60_13840 PF12792 CSS motif domain associated with EAL M0M60_13840 PF00563 EAL domain M0M60_13845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_13850 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13855 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_13855 PF12911 N-terminal TM domain of oligopeptide transport permease C M0M60_13860 PF00005 ABC transporter M0M60_13860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M0M60_13865 PF13989 YejG-like protein M0M60_13870 PF07690 Major Facilitator Superfamily M0M60_13875 PF00849 RNA pseudouridylate synthase M0M60_13875 PF01479 S4 domain M0M60_13880 PF00271 Helicase conserved C-terminal domain M0M60_13880 PF04851 Type III restriction enzyme, res subunit M0M60_13885 PF01386 Ribosomal L25p family M0M60_13890 PF01797 Transposase IS200 like M0M60_13895 PF04245 37-kD nucleoid-associated bacterial protein M0M60_13900 PF07208 Protein of unknown function (DUF1414) M0M60_13905 PF11893 Domain of unknown function (DUF3413) M0M60_13905 PF00884 Sulfatase M0M60_13920 PF05638 Type VI secretion system effector, Hcp M0M60_13940 PF00232 Glycosyl hydrolase family 1 M0M60_13945 PF01418 Helix-turn-helix domain, rpiR family M0M60_13945 PF01380 SIS domain M0M60_13950 PF07484 Phage Tail Collar Domain M0M60_13960 PF04865 Baseplate J-like protein M0M60_14000 PF04984 Phage tail sheath protein subtilisin-like domain M0M60_14000 PF17482 Phage tail sheath C-terminal domain M0M60_14020 PF01261 Xylose isomerase-like TIM barrel M0M60_14025 PF00455 DeoR C terminal sensor domain M0M60_14025 PF08220 DeoR-like helix-turn-helix domain M0M60_14035 PF17042 Nucleotide-binding C-terminal domain M0M60_14035 PF07005 Sugar-binding N-terminal domain M0M60_14040 PF06530 Phage antitermination protein Q M0M60_14045 PF01381 Helix-turn-helix M0M60_14045 PF00717 Peptidase S24-like M0M60_14050 PF06183 DinI-like family M0M60_14055 PF01278 Omptin family M0M60_14060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0M60_14060 PF02743 Cache domain M0M60_14060 PF00672 HAMP domain M0M60_14065 PF12706 Beta-lactamase superfamily domain M0M60_14075 PF00144 Beta-lactamase M0M60_14090 PF01797 Transposase IS200 like M0M60_14095 PF01797 Transposase IS200 like M0M60_14100 PF00267 Gram-negative porin M0M60_14105 PF07690 Major Facilitator Superfamily M0M60_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_14110 PF01627 Hpt domain M0M60_14110 PF16359 RcsD-ABL domain M0M60_14115 PF01627 Hpt domain M0M60_14115 PF16359 RcsD-ABL domain M0M60_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_14120 PF00196 Bacterial regulatory proteins, luxR family M0M60_14120 PF00072 Response regulator receiver domain M0M60_14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_14125 PF00512 His Kinase A (phospho-acceptor) domain M0M60_14125 PF09456 RcsC Alpha-Beta-Loop (ABL) M0M60_14125 PF00072 Response regulator receiver domain M0M60_14130 PF03989 DNA gyrase C-terminal domain, beta-propeller M0M60_14130 PF00521 DNA gyrase/topoisomerase IV, subunit A M0M60_14140 PF00317 Ribonucleotide reductase, all-alpha domain M0M60_14140 PF02867 Ribonucleotide reductase, barrel domain M0M60_14140 PF03477 ATP cone domain M0M60_14145 PF00268 Ribonucleotide reductase, small chain M0M60_14150 PF00111 2Fe-2S iron-sulfur cluster binding domain M0M60_14155 PF03974 Ecotin M0M60_14160 PF00994 Probable molybdopterin binding domain M0M60_14165 PF03222 Tryptophan/tyrosine permease family M0M60_14170 PF07437 YfaZ precursor M0M60_14175 PF06628 Catalase-related immune-responsive M0M60_14175 PF00199 Catalase M0M60_14180 PF06733 DEAD_2 M0M60_14180 PF13307 Helicase C-terminal domain M0M60_14185 PF00267 Gram-negative porin M0M60_14190 PF00892 EamA-like transporter family M0M60_14200 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M0M60_14200 PF01276 Orn/Lys/Arg decarboxylase, major domain M0M60_14200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M0M60_14205 PF13520 Amino acid permease M0M60_14210 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_14215 PF00005 ABC transporter M0M60_14220 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_14230 PF00581 Rhodanese-like domain M0M60_14245 PF00005 ABC transporter M0M60_14250 PF00005 ABC transporter M0M60_14255 PF02653 Branched-chain amino acid transport system / permease component M0M60_14260 PF02653 Branched-chain amino acid transport system / permease component M0M60_14265 PF13188 PAS domain M0M60_14265 PF00158 Sigma-54 interaction domain M0M60_14265 PF02954 Bacterial regulatory protein, Fis family M0M60_14270 PF07308 Protein of unknown function (DUF1456) M0M60_14275 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_14280 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_14290 PF00005 ABC transporter M0M60_14295 PF04226 Transglycosylase associated protein M0M60_14305 PF01844 HNH endonuclease M0M60_14310 PF01928 CYTH domain M0M60_14315 PF09330 D-lactate dehydrogenase, membrane binding M0M60_14315 PF01565 FAD binding domain M0M60_14320 PF00768 D-alanyl-D-alanine carboxypeptidase M0M60_14330 PF01207 Dihydrouridine synthase (Dus) M0M60_14340 PF01797 Transposase IS200 like M0M60_14345 PF01027 Inhibitor of apoptosis-promoting Bax1 M0M60_14350 PF02391 MoaE protein M0M60_14355 PF02597 ThiS family M0M60_14360 PF01967 MoaC family M0M60_14365 PF06463 Molybdenum Cofactor Synthesis C M0M60_14365 PF04055 Radical SAM superfamily M0M60_14370 PF01933 Uncharacterised protein family UPF0052 M0M60_14375 PF09905 DNA-binding protein VF530 M0M60_14380 PF00271 Helicase conserved C-terminal domain M0M60_14380 PF04851 Type III restriction enzyme, res subunit M0M60_14380 PF02151 UvrB/uvrC motif M0M60_14380 PF12344 Ultra-violet resistance protein B M0M60_14380 PF17757 UvrB interaction domain M0M60_14385 PF00005 ABC transporter M0M60_14385 PF09383 NIL domain M0M60_14395 PF08241 Methyltransferase domain M0M60_14400 PF00155 Aminotransferase class I and II M0M60_14405 PF06968 Biotin and Thiamin Synthesis associated domain M0M60_14405 PF04055 Radical SAM superfamily M0M60_14410 PF00202 Aminotransferase class-III M0M60_14415 PF10282 Lactonase, 7-bladed beta-propeller M0M60_14425 PF00005 ABC transporter M0M60_14425 PF03459 TOBE domain M0M60_14430 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_14440 PF10766 Multidrug efflux pump-associated protein AcrZ M0M60_14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_14445 PF03459 TOBE domain M0M60_14450 PF00005 ABC transporter M0M60_14460 PF16363 GDP-mannose 4,6 dehydratase M0M60_14465 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M0M60_14465 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M0M60_14470 PF10509 Galactokinase galactose-binding signature M0M60_14470 PF08544 GHMP kinases C terminal M0M60_14470 PF00288 GHMP kinases N terminal domain M0M60_14480 PF01263 Aldose 1-epimerase M0M60_14490 PF00300 Histidine phosphatase superfamily (branch 1) M0M60_14495 PF00793 DAHP synthetase I family M0M60_14500 PF02796 Helix-turn-helix domain of resolvase M0M60_14500 PF00665 Integrase core domain M0M60_14505 PF01695 IstB-like ATP binding protein M0M60_14510 PF00793 DAHP synthetase I family M0M60_14515 PF01545 Cation efflux family M0M60_14520 PF04973 Nicotinamide mononucleotide transporter M0M60_14525 PF02445 Quinolinate synthetase A protein M0M60_14545 PF16331 TolA binding protein trimerisation M0M60_14545 PF13174 Tetratricopeptide repeat M0M60_14550 PF00691 OmpA family M0M60_14555 PF04052 TolB amino-terminal domain M0M60_14555 PF07676 WD40-like Beta Propeller Repeat M0M60_14560 PF06519 TolA C-terminal M0M60_14560 PF06519 TolA C-terminal M0M60_14565 PF02472 Biopolymer transport protein ExbD/TolR M0M60_14570 PF01618 MotA/TolQ/ExbB proton channel family M0M60_14575 PF03061 Thioesterase superfamily M0M60_14580 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) M0M60_14585 PF08173 Membrane bound YbgT-like protein M0M60_14590 PF02322 Cytochrome bd terminal oxidase subunit II M0M60_14595 PF01654 Cytochrome bd terminal oxidase subunit I M0M60_14600 PF00549 CoA-ligase M0M60_14600 PF02629 CoA binding domain M0M60_14605 PF00549 CoA-ligase M0M60_14605 PF08442 ATP-grasp domain M0M60_14610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M0M60_14610 PF00364 Biotin-requiring enzyme M0M60_14610 PF02817 e3 binding domain M0M60_14615 PF16078 2-oxoglutarate dehydrogenase N-terminus M0M60_14615 PF00676 Dehydrogenase E1 component M0M60_14615 PF16870 2-oxoglutarate dehydrogenase C-terminal M0M60_14615 PF02779 Transketolase, pyrimidine binding domain M0M60_14620 PF13085 2Fe-2S iron-sulfur cluster binding domain M0M60_14625 PF02910 Fumarate reductase flavoprotein C-term M0M60_14625 PF00890 FAD binding domain M0M60_14630 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0M60_14635 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M0M60_14640 PF00285 Citrate synthase, C-terminal domain M0M60_14645 PF01025 GrpE M0M60_14650 PF01513 ATP-NAD kinase M0M60_14655 PF02463 RecF/RecN/SMC N terminal domain M0M60_14660 PF04355 SmpA / OmlA family M0M60_14665 PF03658 RnfH family Ubiquitin M0M60_14670 PF03364 Polyketide cyclase / dehydrase and lipid transport M0M60_14675 PF01668 SmpB protein M0M60_14685 PF01797 Transposase IS200 like M0M60_14690 PF13356 Arm DNA-binding domain M0M60_14690 PF00589 Phage integrase family M0M60_14750 PF05973 Phage derived protein Gp49-like (DUF891) M0M60_14760 PF02796 Helix-turn-helix domain of resolvase M0M60_14760 PF00665 Integrase core domain M0M60_14765 PF01695 IstB-like ATP binding protein M0M60_14775 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M0M60_14785 PF00929 Exonuclease M0M60_14790 PF00075 RNase H M0M60_14795 PF08241 Methyltransferase domain M0M60_14800 PF16123 Hydroxyacylglutathione hydrolase C-terminus M0M60_14800 PF00753 Metallo-beta-lactamase superfamily M0M60_14805 PF01476 LysM domain M0M60_14805 PF01464 Transglycosylase SLT domain M0M60_14810 PF03372 Endonuclease/Exonuclease/phosphatase family M0M60_14820 PF00248 Aldo/keto reductase family M0M60_14860 PF00005 ABC transporter M0M60_14860 PF09383 NIL domain M0M60_14865 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_14870 PF03180 NLPA lipoprotein M0M60_14875 PF16358 RcsF lipoprotein M0M60_14880 PF01980 tRNA-methyltransferase O M0M60_14880 PF18389 TrmO C-terminal domain M0M60_14885 PF04073 Aminoacyl-tRNA editing domain M0M60_14885 PF03129 Anticodon binding domain M0M60_14885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M0M60_14890 PF17185 NlpE C-terminal OB domain M0M60_14890 PF04170 NlpE N-terminal domain M0M60_14895 PF00472 RF-1 domain M0M60_14900 PF07152 YaeQ protein M0M60_14905 PF06786 Uncharacterised protein family (UPF0253) M0M60_14910 PF07073 Modulator of Rho-dependent transcription termination (ROF) M0M60_14915 PF00034 Cytochrome c M0M60_14920 PF11734 TilS substrate C-terminal domain M0M60_14920 PF09179 TilS substrate binding domain M0M60_14920 PF01171 PP-loop family M0M60_14925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M0M60_14930 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M0M60_14935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0M60_14935 PF01336 OB-fold nucleic acid binding domain M0M60_14935 PF02811 PHP domain M0M60_14935 PF14579 Helix-hairpin-helix motif M0M60_14935 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0M60_14940 PF01351 Ribonuclease HII M0M60_14945 PF02684 Lipid-A-disaccharide synthetase M0M60_14950 PF00132 Bacterial transferase hexapeptide (six repeats) M0M60_14950 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M0M60_14955 PF07977 FabA-like domain M0M60_14960 PF00132 Bacterial transferase hexapeptide (six repeats) M0M60_14960 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M0M60_14965 PF03938 Outer membrane protein (OmpH-like) M0M60_14970 PF01103 Surface antigen M0M60_14970 PF07244 Surface antigen variable number repeat M0M60_14975 PF17820 PDZ domain M0M60_14975 PF02163 Peptidase family M50 M0M60_14985 PF01255 Putative undecaprenyl diphosphate synthase M0M60_14990 PF13288 DXP reductoisomerase C-terminal domain M0M60_14990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M0M60_14990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M0M60_14995 PF01765 Ribosome recycling factor M0M60_15000 PF00696 Amino acid kinase family M0M60_15005 PF00889 Elongation factor TS M0M60_15010 PF00318 Ribosomal protein S2 M0M60_15015 PF00557 Metallopeptidase family M24 M0M60_15020 PF08335 GlnD PII-uridylyltransferase M0M60_15020 PF01966 HD domain M0M60_15020 PF01909 Nucleotidyltransferase domain M0M60_15020 PF01842 ACT domain M0M60_15025 PF00132 Bacterial transferase hexapeptide (six repeats) M0M60_15025 PF14602 Hexapeptide repeat of succinyl-transferase M0M60_15025 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M0M60_15030 PF11944 Protein of unknown function (DUF3461) M0M60_15035 PF00258 Flavodoxin M0M60_15040 PF00849 RNA pseudouridylate synthase M0M60_15045 PF04287 tRNA pseudouridine synthase C M0M60_15050 PF01797 Transposase IS200 like M0M60_15055 PF07348 Syd protein (SUKH-2) M0M60_15060 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M0M60_15060 PF14489 QueF-like protein M0M60_15065 PF03641 Possible lysine decarboxylase M0M60_15065 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M0M60_15065 PF11892 Domain of unknown function (DUF3412) M0M60_15070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0M60_15070 PF01367 5'-3' exonuclease, C-terminal SAM fold M0M60_15075 PF01728 FtsJ-like methyltransferase M0M60_15075 PF18125 RlmM ferredoxin-like domain M0M60_15080 PF04241 Protein of unknown function (DUF423) M0M60_15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_15085 PF03466 LysR substrate binding domain M0M60_15095 PF00266 Aminotransferase class-V M0M60_15100 PF02657 Fe-S metabolism associated domain M0M60_15105 PF00899 ThiF family M0M60_15110 PF06725 3D domain M0M60_15110 PF03562 MltA specific insert domain M0M60_15125 PF01520 N-acetylmuramoyl-L-alanine amidase M0M60_15125 PF11741 AMIN domain M0M60_15130 PF00696 Amino acid kinase family M0M60_15130 PF00583 Acetyltransferase (GNAT) family M0M60_15135 PF13538 UvrD-like helicase C-terminal domain M0M60_15140 PF00580 UvrD/REP helicase N-terminal domain M0M60_15140 PF13361 UvrD-like helicase C-terminal domain M0M60_15140 PF12705 PD-(D/E)XK nuclease superfamily M0M60_15145 PF00675 Insulinase (Peptidase family M16) M0M60_15145 PF16187 Middle or third domain of peptidase_M16 M0M60_15145 PF05193 Peptidase M16 inactive domain M0M60_15150 PF17946 RecC C-terminal domain M0M60_15170 PF01695 IstB-like ATP binding protein M0M60_15175 PF00665 Integrase core domain M0M60_15175 PF02796 Helix-turn-helix domain of resolvase M0M60_15180 PF02801 Beta-ketoacyl synthase, C-terminal domain M0M60_15180 PF00550 Phosphopantetheine attachment site M0M60_15180 PF00501 AMP-binding enzyme M0M60_15180 PF13193 AMP-binding enzyme C-terminal domain M0M60_15180 PF00109 Beta-ketoacyl synthase, N-terminal domain M0M60_15180 PF00668 Condensation domain M0M60_15180 PF16197 Ketoacyl-synthetase C-terminal extension M0M60_15180 PF00202 Aminotransferase class-III M0M60_15185 PF00593 TonB dependent receptor M0M60_15185 PF07715 TonB-dependent Receptor Plug Domain M0M60_15190 PF01546 Peptidase family M20/M25/M40 M0M60_15190 PF07687 Peptidase dimerisation domain M0M60_15195 PF03806 AbgT putative transporter family M0M60_15200 PF12468 Type III secretion system leucine rich repeat protein M0M60_15200 PF14496 C-terminal novel E3 ligase, LRR-interacting M0M60_15205 PF12468 Type III secretion system leucine rich repeat protein M0M60_15205 PF12468 Type III secretion system leucine rich repeat protein M0M60_15205 PF14496 C-terminal novel E3 ligase, LRR-interacting M0M60_15205 PF14496 C-terminal novel E3 ligase, LRR-interacting M0M60_15215 PF12468 Type III secretion system leucine rich repeat protein M0M60_15215 PF14496 C-terminal novel E3 ligase, LRR-interacting M0M60_15220 PF03797 Autotransporter beta-domain M0M60_15230 PF07906 ShET2 enterotoxin, N-terminal region M0M60_15235 PF00873 AcrB/AcrD/AcrF family M0M60_15240 PF00529 HlyD membrane-fusion protein of T1SS M0M60_15240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_15250 PF08447 PAS fold M0M60_15250 PF08448 PAS fold M0M60_15250 PF00563 EAL domain M0M60_15250 PF00990 Diguanylate cyclase, GGDEF domain M0M60_15265 PF00593 TonB dependent receptor M0M60_15265 PF07715 TonB-dependent Receptor Plug Domain M0M60_15270 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M0M60_15275 PF06276 Ferric iron reductase FhuF-like transporter M0M60_15275 PF04183 IucA / IucC family M0M60_15310 PF00196 Bacterial regulatory proteins, luxR family M0M60_15310 PF03472 Autoinducer binding domain M0M60_15315 PF00765 Autoinducer synthase M0M60_15320 PF02517 CPBP intramembrane metalloprotease M0M60_15345 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0M60_15360 PF05736 OprF membrane domain M0M60_15360 PF00691 OmpA family M0M60_15370 PF07724 AAA domain (Cdc48 subfamily) M0M60_15370 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_15370 PF17871 AAA lid domain M0M60_15370 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_15375 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) M0M60_15375 PF04717 Type VI secretion system, phage-baseplate injector M0M60_15375 PF13296 Putative type VI secretion system Rhs element Vgr M0M60_15435 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M0M60_15435 PF01276 Orn/Lys/Arg decarboxylase, major domain M0M60_15435 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M0M60_15440 PF13407 Periplasmic binding protein domain M0M60_15445 PF00005 ABC transporter M0M60_15450 PF02653 Branched-chain amino acid transport system / permease component M0M60_15455 PF07715 TonB-dependent Receptor Plug Domain M0M60_15465 PF01464 Transglycosylase SLT domain M0M60_15465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M0M60_15470 PF04362 Bacterial Fe(2+) trafficking M0M60_15475 PF00633 Helix-hairpin-helix motif M0M60_15475 PF00730 HhH-GPD superfamily base excision DNA repair protein M0M60_15475 PF14815 NUDIX domain M0M60_15475 PF10576 Iron-sulfur binding domain of endonuclease III M0M60_15480 PF02390 Putative methyltransferase M0M60_15485 PF04320 Protein with unknown function (DUF469) M0M60_15490 PF04960 Glutaminase M0M60_15500 PF07634 RtxA repeat M0M60_15500 PF11713 Peptidase C80 family M0M60_15500 PF12146 Serine aminopeptidase, S33 M0M60_15500 PF16671 Actin cross-linking domain M0M60_15500 PF11647 Membrane Localization Domain M0M60_15505 PF06969 HemN C-terminal domain M0M60_15505 PF04055 Radical SAM superfamily M0M60_15510 PF01725 Ham1 family M0M60_15515 PF02594 Uncharacterised ACR, YggU family COG1872 M0M60_15520 PF02325 YGGT family M0M60_15525 PF03807 NADP oxidoreductase coenzyme F420-dependent M0M60_15525 PF14748 Pyrroline-5-carboxylate reductase dimerisation M0M60_15530 PF01168 Alanine racemase, N-terminal domain M0M60_15535 PF00437 Type II/IV secretion system protein M0M60_15540 PF04371 Porphyromonas-type peptidyl-arginine deiminase M0M60_15545 PF00795 Carbon-nitrogen hydrolase M0M60_15550 PF03652 Holliday junction resolvase M0M60_15555 PF02622 Uncharacterized ACR, COG1678 M0M60_15560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M0M60_15560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M0M60_15565 PF04452 RNA methyltransferase M0M60_15570 PF04231 Endonuclease I M0M60_15575 PF10263 SprT-like family M0M60_15575 PF17283 SprT-like zinc ribbon domain M0M60_15580 PF02773 S-adenosylmethionine synthetase, C-terminal domain M0M60_15580 PF02772 S-adenosylmethionine synthetase, central domain M0M60_15580 PF00438 S-adenosylmethionine synthetase, N-terminal domain M0M60_15585 PF17810 Arginine decarboxylase helical bundle domain M0M60_15585 PF17944 Arginine decarboxylase C-terminal helical extension M0M60_15585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0M60_15590 PF01695 IstB-like ATP binding protein M0M60_15595 PF00665 Integrase core domain M0M60_15595 PF02796 Helix-turn-helix domain of resolvase M0M60_15605 PF01435 Peptidase family M48 M0M60_15610 PF00456 Transketolase, thiamine diphosphate binding domain M0M60_15610 PF02779 Transketolase, pyrimidine binding domain M0M60_15610 PF02780 Transketolase, C-terminal domain M0M60_15615 PF01797 Transposase IS200 like M0M60_15620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M0M60_15620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M0M60_15625 PF00162 Phosphoglycerate kinase M0M60_15630 PF01116 Fructose-bisphosphate aldolase class-II M0M60_15640 PF00924 Mechanosensitive ion channel M0M60_15640 PF05552 Conserved TM helix M0M60_15645 PF01810 LysE type translocator M0M60_15650 PF04402 Protein of unknown function (DUF541) M0M60_15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_15655 PF03466 LysR substrate binding domain M0M60_15660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M0M60_15665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M0M60_15665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M0M60_15665 PF01842 ACT domain M0M60_15675 PF01812 5-formyltetrahydrofolate cyclo-ligase family M0M60_15685 PF05164 Cell division protein ZapA M0M60_15690 PF03695 Uncharacterised protein family (UPF0149) M0M60_15695 PF00557 Metallopeptidase family M24 M0M60_15695 PF05195 Aminopeptidase P, N-terminal domain M0M60_15700 PF01494 FAD binding domain M0M60_15705 PF01494 FAD binding domain M0M60_15710 PF01571 Aminomethyltransferase folate-binding domain M0M60_15710 PF08669 Glycine cleavage T-protein C-terminal barrel domain M0M60_15715 PF01597 Glycine cleavage H-protein M0M60_15720 PF02347 Glycine cleavage system P-protein M0M60_15750 PF03006 Haemolysin-III related M0M60_15760 PF01571 Aminomethyltransferase folate-binding domain M0M60_15765 PF03937 Flavinator of succinate dehydrogenase M0M60_15770 PF07254 Membrane-bound toxin component of toxin-antitoxin system M0M60_15775 PF00486 Transcriptional regulatory protein, C terminal M0M60_15775 PF00072 Response regulator receiver domain M0M60_15780 PF00672 HAMP domain M0M60_15780 PF00512 His Kinase A (phospho-acceptor) domain M0M60_15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_15785 PF06123 Inner membrane protein CreD M0M60_15790 PF00258 Flavodoxin M0M60_15795 PF00589 Phage integrase family M0M60_15795 PF02899 Phage integrase, N-terminal SAM-like domain M0M60_15800 PF13098 Thioredoxin-like domain M0M60_15800 PF10411 Disulfide bond isomerase protein N-terminus M0M60_15805 PF01368 DHH family M0M60_15805 PF02272 DHHA1 domain M0M60_15805 PF17768 RecJ OB domain M0M60_15815 PF00152 tRNA synthetases class II (D, K and N) M0M60_15815 PF01336 OB-fold nucleic acid binding domain M0M60_15825 PF13356 Arm DNA-binding domain M0M60_15825 PF14659 Phage integrase, N-terminal SAM-like domain M0M60_15825 PF00589 Phage integrase family M0M60_15845 PF15723 Motility quorum-sensing regulator, toxin of MqsA M0M60_15850 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA M0M60_15940 PF03551 Transcriptional regulator PadR-like family M0M60_15950 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family M0M60_15960 PF13407 Periplasmic binding protein domain M0M60_15965 PF02653 Branched-chain amino acid transport system / permease component M0M60_15970 PF00005 ABC transporter M0M60_15975 PF00005 ABC transporter M0M60_15975 PF17912 MalK OB fold domain M0M60_15980 PF13416 Bacterial extracellular solute-binding protein M0M60_15985 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_15990 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_15995 PF07745 Glycosyl hydrolase family 53 M0M60_16000 PF02449 Beta-galactosidase M0M60_16000 PF08533 Beta-galactosidase C-terminal domain M0M60_16000 PF08532 Beta-galactosidase trimerisation domain M0M60_16005 PF00367 phosphotransferase system, EIIB M0M60_16005 PF02378 Phosphotransferase system, EIIC M0M60_16010 PF02264 LamB porin M0M60_16015 PF00356 Bacterial regulatory proteins, lacI family M0M60_16020 PF13802 Galactose mutarotase-like M0M60_16020 PF01055 Glycosyl hydrolases family 31 M0M60_16020 PF16338 Domain of unknown function (DUF4968) M0M60_16020 PF17137 Domain of unknown function (DUF5110) M0M60_16025 PF07690 Major Facilitator Superfamily M0M60_16030 PF00356 Bacterial regulatory proteins, lacI family M0M60_16040 PF01116 Fructose-bisphosphate aldolase class-II M0M60_16050 PF00884 Sulfatase M0M60_16055 PF13186 Iron-sulfur cluster-binding domain M0M60_16055 PF04055 Radical SAM superfamily M0M60_16060 PF07470 Glycosyl Hydrolase Family 88 M0M60_16070 PF01979 Amidohydrolase family M0M60_16075 PF03610 PTS system fructose IIA component M0M60_16080 PF03613 PTS system mannose/fructose/sorbose family IID component M0M60_16085 PF03609 PTS system sorbose-specific iic component M0M60_16090 PF03830 PTS system sorbose subfamily IIB component M0M60_16095 PF01380 SIS domain M0M60_16100 PF08013 Tagatose 6 phosphate kinase M0M60_16105 PF00455 DeoR C terminal sensor domain M0M60_16105 PF08220 DeoR-like helix-turn-helix domain M0M60_16110 PF00884 Sulfatase M0M60_16120 PF01797 Transposase IS200 like M0M60_16125 PF02796 Helix-turn-helix domain of resolvase M0M60_16125 PF00665 Integrase core domain M0M60_16130 PF01695 IstB-like ATP binding protein M0M60_16135 PF02278 Polysaccharide lyase family 8, super-sandwich domain M0M60_16135 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M0M60_16135 PF09093 Lyase, catalytic M0M60_16135 PF09092 Lyase, N terminal M0M60_16155 PF00484 Carbonic anhydrase M0M60_16170 PF00263 Bacterial type II and III secretion system protein M0M60_16170 PF03958 Bacterial type II/III secretion system short domain M0M60_16175 PF00437 Type II/IV secretion system protein M0M60_16180 PF00482 Type II secretion system (T2SS), protein F M0M60_16185 PF07963 Prokaryotic N-terminal methylation motif M0M60_16185 PF08334 Type II secretion system (T2SS), protein G M0M60_16200 PF07963 Prokaryotic N-terminal methylation motif M0M60_16200 PF02501 Type II secretion system (T2SS), protein I M0M60_16205 PF11612 Type II secretion system (T2SS), protein J M0M60_16205 PF07963 Prokaryotic N-terminal methylation motif M0M60_16225 PF01478 Type IV leader peptidase family M0M60_16225 PF06750 Bacterial Peptidase A24 N-terminal domain M0M60_16245 PF00672 HAMP domain M0M60_16245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M0M60_16245 PF02203 Tar ligand binding domain homologue M0M60_16260 PF03466 LysR substrate binding domain M0M60_16260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_16265 PF07690 Major Facilitator Superfamily M0M60_16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_16270 PF03466 LysR substrate binding domain M0M60_16275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M0M60_16275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M0M60_16280 PF00356 Bacterial regulatory proteins, lacI family M0M60_16285 PF00384 Molybdopterin oxidoreductase M0M60_16285 PF01568 Molydopterin dinucleotide binding domain M0M60_16290 PF13193 AMP-binding enzyme C-terminal domain M0M60_16290 PF00501 AMP-binding enzyme M0M60_16290 PF01553 Acyltransferase M0M60_16295 PF07690 Major Facilitator Superfamily M0M60_16310 PF00248 Aldo/keto reductase family M0M60_16315 PF02976 DNA mismatch repair enzyme MutH M0M60_16320 PF00293 NUDIX domain M0M60_16325 PF00391 PEP-utilising enzyme, mobile domain M0M60_16325 PF01590 GAF domain M0M60_16325 PF05524 PEP-utilising enzyme, N-terminal M0M60_16325 PF02896 PEP-utilising enzyme, TIM barrel domain M0M60_16330 PF01790 Prolipoprotein diacylglyceryl transferase M0M60_16335 PF00303 Thymidylate synthase M0M60_16350 PF02796 Helix-turn-helix domain of resolvase M0M60_16350 PF00665 Integrase core domain M0M60_16355 PF01695 IstB-like ATP binding protein M0M60_16360 PF00550 Phosphopantetheine attachment site M0M60_16360 PF00501 AMP-binding enzyme M0M60_16360 PF08242 Methyltransferase domain M0M60_16360 PF00668 Condensation domain M0M60_16365 PF00501 AMP-binding enzyme M0M60_16365 PF13193 AMP-binding enzyme C-terminal domain M0M60_16365 PF00668 Condensation domain M0M60_16370 PF00501 AMP-binding enzyme M0M60_16370 PF00668 Condensation domain M0M60_16370 PF08242 Methyltransferase domain M0M60_16370 PF00550 Phosphopantetheine attachment site M0M60_16390 PF00975 Thioesterase domain M0M60_16400 PF08021 Siderophore-interacting FAD-binding domain M0M60_16400 PF04954 Siderophore-interacting protein M0M60_16400 PF00664 ABC transporter transmembrane region M0M60_16400 PF00005 ABC transporter M0M60_16405 PF00664 ABC transporter transmembrane region M0M60_16405 PF00005 ABC transporter M0M60_16420 PF02447 GntP family permease M0M60_16430 PF12951 Passenger-associated-transport-repeat M0M60_16435 PF04717 Type VI secretion system, phage-baseplate injector M0M60_16445 PF05593 RHS Repeat M0M60_16445 PF03527 RHS protein M0M60_16460 PF00939 Sodium:sulfate symporter transmembrane region M0M60_16465 PF00356 Bacterial regulatory proteins, lacI family M0M60_16505 PF00691 OmpA family M0M60_16505 PF13677 Membrane MotB of proton-channel complex MotA/MotB M0M60_16510 PF01618 MotA/TolQ/ExbB proton channel family M0M60_16515 PF04542 Sigma-70 region 2 M0M60_16515 PF04545 Sigma-70, region 4 M0M60_16540 PF07195 Flagellar hook-associated protein 2 C-terminus M0M60_16540 PF02465 Flagellar hook-associated protein 2 N-terminus M0M60_16540 PF07196 Flagellin hook IN motif M0M60_16545 PF00700 Bacterial flagellin C-terminal helical region M0M60_16545 PF00669 Bacterial flagellin N-terminal helical region M0M60_16550 PF00700 Bacterial flagellin C-terminal helical region M0M60_16550 PF00669 Bacterial flagellin N-terminal helical region M0M60_16555 PF00700 Bacterial flagellin C-terminal helical region M0M60_16555 PF00669 Bacterial flagellin N-terminal helical region M0M60_16560 PF00486 Transcriptional regulatory protein, C terminal M0M60_16560 PF18500 CadC C-terminal domain 1 M0M60_16580 PF00460 Flagella basal body rod protein M0M60_16580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0M60_16590 PF02119 Flagellar P-ring protein M0M60_16595 PF02107 Flagellar L-ring protein M0M60_16600 PF00460 Flagella basal body rod protein M0M60_16600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0M60_16610 PF01797 Transposase IS200 like M0M60_16620 PF07559 Flagellar basal body protein FlaE M0M60_16620 PF00460 Flagella basal body rod protein M0M60_16620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0M60_16625 PF13861 FlgD Tudor-like domain M0M60_16625 PF03963 Flagellar hook capping protein - N-terminal region M0M60_16625 PF13860 FlgD Ig-like domain M0M60_16630 PF00460 Flagella basal body rod protein M0M60_16630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M0M60_16635 PF00460 Flagella basal body rod protein M0M60_16640 PF13144 Chaperone for flagella basal body P-ring formation M0M60_16660 PF18269 T3SS EscN ATPase C-terminal domain M0M60_16660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0M60_16675 PF01514 Secretory protein of YscJ/FliF family M0M60_16675 PF08345 Flagellar M-ring protein C-terminal M0M60_16680 PF02049 Flagellar hook-basal body complex protein FliE M0M60_16685 PF00072 Response regulator receiver domain M0M60_16685 PF00158 Sigma-54 interaction domain M0M60_16685 PF02954 Bacterial regulatory protein, Fis family M0M60_16695 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0M60_16700 PF00813 FliP family M0M60_16705 PF01313 Bacterial export proteins, family 3 M0M60_16710 PF01311 Bacterial export proteins, family 1 M0M60_16715 PF01312 FlhB HrpN YscU SpaS Family M0M60_16735 PF01497 Periplasmic binding protein M0M60_16740 PF09222 Fimbrial adhesin F17-AG, lectin domain M0M60_16740 PF00419 Fimbrial protein M0M60_16745 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_16745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_16750 PF13953 PapC C-terminal domain M0M60_16750 PF13954 PapC N-terminal domain M0M60_16750 PF00577 Outer membrane usher protein M0M60_16755 PF01797 Transposase IS200 like M0M60_16760 PF01797 Transposase IS200 like M0M60_16775 PF04972 BON domain M0M60_16775 PF00263 Bacterial type II and III secretion system protein M0M60_16775 PF13629 Pilus formation protein N terminal region M0M60_16780 PF04972 BON domain M0M60_16780 PF00263 Bacterial type II and III secretion system protein M0M60_16780 PF13629 Pilus formation protein N terminal region M0M60_16795 PF00437 Type II/IV secretion system protein M0M60_16830 PF02472 Biopolymer transport protein ExbD/TolR M0M60_16835 PF01618 MotA/TolQ/ExbB proton channel family M0M60_16840 PF01053 Cys/Met metabolism PLP-dependent enzyme M0M60_16845 PF09335 SNARE associated Golgi protein M0M60_16850 PF06719 AraC-type transcriptional regulator N-terminus M0M60_16850 PF12833 Helix-turn-helix domain M0M60_16855 PF00465 Iron-containing alcohol dehydrogenase M0M60_16865 PF00248 Aldo/keto reductase family M0M60_16875 PF07732 Multicopper oxidase M0M60_16875 PF07731 Multicopper oxidase M0M60_16880 PF01553 Acyltransferase M0M60_16885 PF03989 DNA gyrase C-terminal domain, beta-propeller M0M60_16885 PF00521 DNA gyrase/topoisomerase IV, subunit A M0M60_16895 PF02525 Flavodoxin-like fold M0M60_16900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_16900 PF03466 LysR substrate binding domain M0M60_16905 PF01751 Toprim domain M0M60_16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_16905 PF00204 DNA gyrase B M0M60_16905 PF00986 DNA gyrase B subunit, carboxyl terminus M0M60_16910 PF05728 Uncharacterised protein family (UPF0227) M0M60_16915 PF00149 Calcineurin-like phosphoesterase M0M60_16920 PF06853 Protein of unknown function (DUF1249) M0M60_16925 PF00293 NUDIX domain M0M60_16930 PF02321 Outer membrane efflux protein M0M60_16935 PF06693 Protein of unknown function (DUF1190) M0M60_16940 PF03738 Glutathionylspermidine synthase preATP-grasp M0M60_16945 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M0M60_16950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M0M60_16955 PF04380 Membrane fusogenic activity M0M60_16965 PF13520 Amino acid permease M0M60_16970 PF00294 pfkB family carbohydrate kinase M0M60_16970 PF01467 Cytidylyltransferase-like M0M60_16975 PF08335 GlnD PII-uridylyltransferase M0M60_16975 PF03710 Glutamate-ammonia ligase adenylyltransferase M0M60_16980 PF01928 CYTH domain M0M60_16985 PF08239 Bacterial SH3 domain M0M60_16990 PF01966 HD domain M0M60_16990 PF01743 Poly A polymerase head domain M0M60_16990 PF12627 Probable RNA and SrmB- binding site of polymerase A M0M60_16995 PF02673 Bacitracin resistance protein BacA M0M60_17000 PF02152 Dihydroneopterin aldolase M0M60_17005 PF02660 Glycerol-3-phosphate acyltransferase M0M60_17010 PF00814 Glycoprotease family M0M60_17015 PF01165 Ribosomal protein S21 M0M60_17020 PF10410 DnaB-helicase binding domain of primase M0M60_17020 PF08278 DNA primase DnaG DnaB-binding M0M60_17020 PF08275 DNA primase catalytic core, N-terminal domain M0M60_17020 PF01807 CHC2 zinc finger M0M60_17025 PF04546 Sigma-70, non-essential region M0M60_17025 PF03979 Sigma-70 factor, region 1.1 M0M60_17025 PF00140 Sigma-70 factor, region 1.2 M0M60_17025 PF04542 Sigma-70 region 2 M0M60_17025 PF04539 Sigma-70 region 3 M0M60_17025 PF04545 Sigma-70, region 4 M0M60_17085 PF03466 LysR substrate binding domain M0M60_17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_17105 PF01042 Endoribonuclease L-PSP M0M60_17135 PF04632 Fusaric acid resistance protein family M0M60_17145 PF14310 Fibronectin type III-like domain M0M60_17145 PF00933 Glycosyl hydrolase family 3 N terminal domain M0M60_17145 PF01915 Glycosyl hydrolase family 3 C-terminal domain M0M60_17155 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_17160 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_17165 PF01547 Bacterial extracellular solute-binding protein M0M60_17170 PF00356 Bacterial regulatory proteins, lacI family M0M60_17175 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M0M60_17180 PF03459 TOBE domain M0M60_17180 PF17912 MalK OB fold domain M0M60_17180 PF00005 ABC transporter M0M60_17200 PF13018 Extended Signal Peptide of Type V secretion system M0M60_17200 PF05860 haemagglutination activity domain M0M60_17200 PF13332 Hemagglutinin repeat M0M60_17200 PF04829 Pre-toxin domain with VENN motif M0M60_17205 PF13018 Extended Signal Peptide of Type V secretion system M0M60_17205 PF04829 Pre-toxin domain with VENN motif M0M60_17205 PF05860 haemagglutination activity domain M0M60_17205 PF13332 Hemagglutinin repeat M0M60_17215 PF04829 Pre-toxin domain with VENN motif M0M60_17215 PF13332 Hemagglutinin repeat M0M60_17220 PF04829 Pre-toxin domain with VENN motif M0M60_17220 PF13332 Hemagglutinin repeat M0M60_17230 PF13332 Hemagglutinin repeat M0M60_17230 PF04829 Pre-toxin domain with VENN motif M0M60_17230 PF05860 haemagglutination activity domain M0M60_17230 PF13018 Extended Signal Peptide of Type V secretion system M0M60_17235 PF04829 Pre-toxin domain with VENN motif M0M60_17235 PF05860 haemagglutination activity domain M0M60_17235 PF13332 Hemagglutinin repeat M0M60_17235 PF13018 Extended Signal Peptide of Type V secretion system M0M60_17240 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M0M60_17240 PF17287 POTRA domain M0M60_17240 PF08479 POTRA domain, ShlB-type M0M60_17245 PF00092 von Willebrand factor type A domain M0M60_17250 PF02342 TerD domain M0M60_17275 PF03729 Short repeat of unknown function (DUF308) M0M60_17280 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_17280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M0M60_17285 PF05175 Methyltransferase small domain M0M60_17290 PF03797 Autotransporter beta-domain M0M60_17295 PF01863 Protein of unknown function DUF45 M0M60_17300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M0M60_17305 PF00375 Sodium:dicarboxylate symporter family M0M60_17310 PF01797 Transposase IS200 like M0M60_17315 PF10688 Bacterial inner membrane protein M0M60_17320 PF08666 SAF domain M0M60_17320 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M0M60_17325 PF08125 Mannitol dehydrogenase C-terminal domain M0M60_17325 PF01232 Mannitol dehydrogenase Rossmann domain M0M60_17330 PF02614 Glucuronate isomerase M0M60_17335 PF07690 Major Facilitator Superfamily M0M60_17340 PF07729 FCD domain M0M60_17340 PF00392 Bacterial regulatory proteins, gntR family M0M60_17350 PF09335 SNARE associated Golgi protein M0M60_17355 PF13721 SecD export protein N-terminal TM region M0M60_17365 PF05957 Bacterial protein of unknown function (DUF883) M0M60_17370 PF07332 Putative Actinobacterial Holin-X, holin superfamily III M0M60_17380 PF07681 DoxX M0M60_17390 PF00665 Integrase core domain M0M60_17390 PF02796 Helix-turn-helix domain of resolvase M0M60_17395 PF01695 IstB-like ATP binding protein M0M60_17400 PF00293 NUDIX domain M0M60_17410 PF07516 SecA Wing and Scaffold domain M0M60_17410 PF01043 SecA preprotein cross-linking domain M0M60_17410 PF07517 SecA DEAD-like domain M0M60_17410 PF02810 SEC-C motif M0M60_17415 PF06558 Secretion monitor precursor protein (SecM) M0M60_17425 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M0M60_17430 PF00091 Tubulin/FtsZ family, GTPase domain M0M60_17430 PF12327 FtsZ family, C-terminal domain M0M60_17435 PF02491 SHS2 domain inserted in FTSA M0M60_17440 PF03799 Cell division protein FtsQ M0M60_17440 PF08478 POTRA domain, FtsQ-type M0M60_17445 PF07478 D-ala D-ala ligase C-terminus M0M60_17445 PF01820 D-ala D-ala ligase N-terminus M0M60_17450 PF02875 Mur ligase family, glutamate ligase domain M0M60_17450 PF08245 Mur ligase middle domain M0M60_17450 PF01225 Mur ligase family, catalytic domain M0M60_17455 PF04101 Glycosyltransferase family 28 C-terminal domain M0M60_17455 PF03033 Glycosyltransferase family 28 N-terminal domain M0M60_17460 PF01098 Cell cycle protein M0M60_17465 PF02875 Mur ligase family, glutamate ligase domain M0M60_17465 PF08245 Mur ligase middle domain M0M60_17470 PF00953 Glycosyl transferase family 4 M0M60_17470 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M0M60_17475 PF01225 Mur ligase family, catalytic domain M0M60_17475 PF02875 Mur ligase family, glutamate ligase domain M0M60_17475 PF08245 Mur ligase middle domain M0M60_17480 PF01225 Mur ligase family, catalytic domain M0M60_17480 PF02875 Mur ligase family, glutamate ligase domain M0M60_17480 PF08245 Mur ligase middle domain M0M60_17485 PF03717 Penicillin-binding Protein dimerisation domain M0M60_17485 PF00905 Penicillin binding protein transpeptidase domain M0M60_17490 PF04999 Cell division protein FtsL M0M60_17495 PF01795 MraW methylase family M0M60_17500 PF02381 MraZ protein, putative antitoxin-like M0M60_17510 PF06610 L-alanine exporter M0M60_17515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M0M60_17515 PF00356 Bacterial regulatory proteins, lacI family M0M60_17520 PF01797 Transposase IS200 like M0M60_17525 PF10369 Small subunit of acetolactate synthase M0M60_17530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M0M60_17530 PF00205 Thiamine pyrophosphate enzyme, central domain M0M60_17530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M0M60_17535 PF00501 AMP-binding enzyme M0M60_17540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_17540 PF03466 LysR substrate binding domain M0M60_17550 PF01797 Transposase IS200 like M0M60_17555 PF00682 HMGL-like M0M60_17555 PF08502 LeuA allosteric (dimerisation) domain M0M60_17560 PF00180 Isocitrate/isopropylmalate dehydrogenase M0M60_17565 PF00330 Aconitase family (aconitate hydratase) M0M60_17570 PF00694 Aconitase C-terminal domain M0M60_17575 PF07690 Major Facilitator Superfamily M0M60_17580 PF00665 Integrase core domain M0M60_17580 PF02796 Helix-turn-helix domain of resolvase M0M60_17585 PF01695 IstB-like ATP binding protein M0M60_17595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M0M60_17595 PF12793 Sugar transport-related sRNA regulator N-term M0M60_17610 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_17615 PF00005 ABC transporter M0M60_17620 PF09335 SNARE associated Golgi protein M0M60_17625 PF00136 DNA polymerase family B M0M60_17625 PF03104 DNA polymerase family B, exonuclease domain M0M60_17630 PF00176 SNF2 family N-terminal domain M0M60_17630 PF18339 RapA N-terminal Tudor like domain 1 M0M60_17630 PF12137 RNA polymerase recycling family C-terminal M0M60_17630 PF00271 Helicase conserved C-terminal domain M0M60_17630 PF18337 RapA N-terminal Tudor like domain M0M60_17645 PF06744 Type VI secretion protein IcmF C-terminal M0M60_17645 PF14331 ImcF-related N-terminal domain M0M60_17645 PF06761 Intracellular multiplication and human macrophage-killing M0M60_17650 PF00691 OmpA family M0M60_17650 PF05736 OprF membrane domain M0M60_17655 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M0M60_17690 PF04717 Type VI secretion system, phage-baseplate injector M0M60_17690 PF06715 Gp5 C-terminal repeat (3 copies) M0M60_17695 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_17695 PF17871 AAA lid domain M0M60_17695 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_17695 PF07724 AAA domain (Cdc48 subfamily) M0M60_17705 PF05947 Type VI secretion system, TssF M0M60_17720 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M0M60_17725 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 M0M60_17740 PF00849 RNA pseudouridylate synthase M0M60_17745 PF00226 DnaJ domain M0M60_17745 PF05099 Tellurite resistance protein TerB M0M60_17750 PF04453 LPS transport system D M0M60_17750 PF03968 OstA-like protein M0M60_17755 PF00639 PPIC-type PPIASE domain M0M60_17755 PF09312 SurA N-terminal domain M0M60_17760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M0M60_17765 PF00398 Ribosomal RNA adenine dimethylase M0M60_17770 PF04379 ApaG domain M0M60_17775 PF00149 Calcineurin-like phosphoesterase M0M60_17790 PF01797 Transposase IS200 like M0M60_17795 PF00186 Dihydrofolate reductase M0M60_17800 PF12821 Threonine/Serine exporter, ThrE M0M60_17805 PF06738 Putative threonine/serine exporter M0M60_17810 PF01810 LysE type translocator M0M60_17815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M0M60_17815 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M0M60_17815 PF02142 MGS-like domain M0M60_17820 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M0M60_17820 PF00117 Glutamine amidotransferase class-I M0M60_17825 PF05173 Dihydrodipicolinate reductase, C-terminus M0M60_17825 PF01113 Dihydrodipicolinate reductase, N-terminus M0M60_17830 PF01797 Transposase IS200 like M0M60_17835 PF02401 LytB protein M0M60_17840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0M60_17845 PF01252 Signal peptidase (SPase) II M0M60_17850 PF08264 Anticodon-binding domain of tRNA M0M60_17850 PF00133 tRNA synthetases class I (I, L, M and V) M0M60_17850 PF06827 Zinc finger found in FPG and IleRS M0M60_17855 PF06574 FAD synthetase M0M60_17855 PF01687 Riboflavin kinase M0M60_17860 PF01649 Ribosomal protein S20 M0M60_17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_17865 PF03466 LysR substrate binding domain M0M60_17870 PF06965 Na+/H+ antiporter 1 M0M60_17875 PF00226 DnaJ domain M0M60_17875 PF00684 DnaJ central domain M0M60_17875 PF01556 DnaJ C terminal domain M0M60_17880 PF00012 Hsp70 protein M0M60_17885 PF01184 GPR1/FUN34/yaaH family M0M60_17895 PF07690 Major Facilitator Superfamily M0M60_17900 PF00994 Probable molybdopterin binding domain M0M60_17905 PF00923 Transaldolase/Fructose-6-phosphate aldolase M0M60_17915 PF03883 Peroxide stress protein YaaA M0M60_17920 PF00291 Pyridoxal-phosphate dependent enzyme M0M60_17920 PF14821 Threonine synthase N terminus M0M60_17925 PF08544 GHMP kinases C terminal M0M60_17925 PF00288 GHMP kinases N terminal domain M0M60_17930 PF03447 Homoserine dehydrogenase, NAD binding domain M0M60_17930 PF00742 Homoserine dehydrogenase M0M60_17930 PF00696 Amino acid kinase family M0M60_17930 PF01842 ACT domain M0M60_17930 PF13840 ACT domain M0M60_17935 PF08254 Threonine leader peptide M0M60_17945 PF00072 Response regulator receiver domain M0M60_17945 PF00486 Transcriptional regulatory protein, C terminal M0M60_17950 PF05981 CreA protein M0M60_17955 PF06445 GyrI-like small molecule binding domain M0M60_17955 PF12833 Helix-turn-helix domain M0M60_17960 PF00300 Histidine phosphatase superfamily (branch 1) M0M60_17965 PF01931 Protein of unknown function DUF84 M0M60_17970 PF01371 Trp repressor protein M0M60_17975 PF01464 Transglycosylase SLT domain M0M60_17975 PF14718 Soluble lytic murein transglycosylase L domain M0M60_17980 PF00689 Cation transporting ATPase, C-terminus M0M60_17980 PF00690 Cation transporter/ATPase, N-terminus M0M60_17990 PF00990 Diguanylate cyclase, GGDEF domain M0M60_17990 PF17152 Periplasmic sensor domain M0M60_17995 PF00691 OmpA family M0M60_18005 PF02661 Fic/DOC family M0M60_18010 PF01381 Helix-turn-helix M0M60_18010 PF13521 AAA domain M0M60_18015 PF18073 Rubredoxin metal binding domain M0M60_18020 PF18429 Domain of unknown function (DUF5609) M0M60_18025 PF10144 Bacterial virulence factor haemolysin M0M60_18030 PF01048 Phosphorylase superfamily M0M60_18035 PF01676 Metalloenzyme superfamily M0M60_18045 PF01791 DeoC/LacD family aldolase M0M60_18050 PF01773 Na+ dependent nucleoside transporter N-terminus M0M60_18050 PF07670 Nucleoside recognition M0M60_18050 PF07662 Na+ dependent nucleoside transporter C-terminus M0M60_18055 PF01026 TatD related DNase M0M60_18060 PF01734 Patatin-like phospholipase M0M60_18065 PF07043 Protein of unknown function (DUF1328) M0M60_18070 PF04972 BON domain M0M60_18075 PF00009 Elongation factor Tu GTP binding domain M0M60_18075 PF03144 Elongation factor Tu domain 2 M0M60_18075 PF16658 Class II release factor RF3, C-terminal domain M0M60_18080 PF00583 Acetyltransferase (GNAT) family M0M60_18085 PF03603 DNA polymerase III psi subunit M0M60_18090 PF05175 Methyltransferase small domain M0M60_18090 PF08468 Methyltransferase small domain N-terminal M0M60_18100 PF07256 Protein of unknown function (DUF1435) M0M60_18105 PF00990 Diguanylate cyclase, GGDEF domain M0M60_18110 PF01095 Pectinesterase M0M60_18125 PF00873 AcrB/AcrD/AcrF family M0M60_18130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_18145 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M0M60_18150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_18150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_18165 PF00005 ABC transporter M0M60_18170 PF02653 Branched-chain amino acid transport system / permease component M0M60_18175 PF02653 Branched-chain amino acid transport system / permease component M0M60_18180 PF13407 Periplasmic binding protein domain M0M60_18185 PF01791 DeoC/LacD family aldolase M0M60_18190 PF03992 Antibiotic biosynthesis monooxygenase M0M60_18195 PF10696 Protein of unknown function (DUF2501) M0M60_18200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0M60_18200 PF00381 PTS HPr component phosphorylation site M0M60_18200 PF02896 PEP-utilising enzyme, TIM barrel domain M0M60_18200 PF05524 PEP-utilising enzyme, N-terminal M0M60_18200 PF00391 PEP-utilising enzyme, mobile domain M0M60_18210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0M60_18215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M0M60_18220 PF12833 Helix-turn-helix domain M0M60_18230 PF05987 Bacterial protein of unknown function (DUF898) M0M60_18245 PF00665 Integrase core domain M0M60_18270 PF01555 DNA methylase M0M60_18285 PF07728 AAA domain (dynein-related subfamily) M0M60_18285 PF12102 Domain of unknown function (DUF3578) M0M60_18290 PF02796 Helix-turn-helix domain of resolvase M0M60_18290 PF00665 Integrase core domain M0M60_18295 PF01695 IstB-like ATP binding protein M0M60_18300 PF07338 Protein of unknown function (DUF1471) M0M60_18305 PF02770 Acyl-CoA dehydrogenase, middle domain M0M60_18305 PF18158 Adaptive response protein AidB N-terminal domain M0M60_18305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M0M60_18310 PF00588 SpoU rRNA Methylase family M0M60_18310 PF08032 RNA 2'-O ribose methyltransferase substrate binding M0M60_18315 PF17876 Cold shock domain M0M60_18315 PF08461 Ribonuclease R winged-helix domain M0M60_18315 PF08206 Ribonuclease B OB domain M0M60_18315 PF00773 RNB domain M0M60_18315 PF00575 S1 RNA binding domain M0M60_18320 PF02082 Transcriptional regulator M0M60_18325 PF00709 Adenylosuccinate synthetase M0M60_18330 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) M0M60_18335 PF01145 SPFH domain / Band 7 family M0M60_18340 PF01145 SPFH domain / Band 7 family M0M60_18340 PF12221 Bacterial membrane protein N terminal M0M60_18345 PF01926 50S ribosome-binding GTPase M0M60_18345 PF16360 GTP-binding GTPase Middle Region M0M60_18345 PF13167 GTP-binding GTPase N-terminal M0M60_18350 PF17209 Hfq protein M0M60_18360 PF01119 DNA mismatch repair protein, C-terminal domain M0M60_18360 PF08676 MutL C terminal dimerisation domain M0M60_18365 PF01520 N-acetylmuramoyl-L-alanine amidase M0M60_18370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M0M60_18375 PF01256 Carbohydrate kinase M0M60_18375 PF03853 YjeF-related protein N-terminus M0M60_18380 PF08331 Domain of unknown function (DUF1730) M0M60_18390 PF00929 Exonuclease M0M60_18395 PF03193 RsgA GTPase M0M60_18400 PF02666 Phosphatidylserine decarboxylase M0M60_18405 PF00924 Mechanosensitive ion channel M0M60_18405 PF12795 Mechanosensitive ion channel porin domain M0M60_18405 PF12794 Mechanosensitive ion channel inner membrane domain 1 M0M60_18410 PF00152 tRNA synthetases class II (D, K and N) M0M60_18420 PF00890 FAD binding domain M0M60_18420 PF02910 Fumarate reductase flavoprotein C-term M0M60_18425 PF13085 2Fe-2S iron-sulfur cluster binding domain M0M60_18425 PF13183 4Fe-4S dicluster domain M0M60_18430 PF02300 Fumarate reductase subunit C M0M60_18435 PF02313 Fumarate reductase subunit D M0M60_18440 PF01797 Transposase IS200 like M0M60_18445 PF00893 Small Multidrug Resistance protein M0M60_18450 PF01132 Elongation factor P (EF-P) OB domain M0M60_18450 PF08207 Elongation factor P (EF-P) KOW-like domain M0M60_18450 PF09285 Elongation factor P, C-terminal M0M60_18455 PF04055 Radical SAM superfamily M0M60_18460 PF13698 Domain of unknown function (DUF4156) M0M60_18465 PF00118 TCP-1/cpn60 chaperonin family M0M60_18470 PF00166 Chaperonin 10 Kd subunit M0M60_18475 PF04186 FxsA cytoplasmic membrane protein M0M60_18480 PF10415 Fumarase C C-terminus M0M60_18480 PF00206 Lyase M0M60_18490 PF03091 CutA1 divalent ion tolerance protein M0M60_18495 PF11412 Disulphide bond corrector protein DsbC M0M60_18495 PF02683 Cytochrome C biogenesis protein transmembrane region M0M60_18500 PF01568 Molydopterin dinucleotide binding domain M0M60_18500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M0M60_18500 PF00384 Molybdopterin oxidoreductase M0M60_18505 PF12800 4Fe-4S binding domain M0M60_18505 PF13247 4Fe-4S dicluster domain M0M60_18510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M0M60_18510 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_18510 PF13247 4Fe-4S dicluster domain M0M60_18545 PF06379 L-rhamnose-proton symport protein (RhaT) M0M60_18550 PF02311 AraC-like ligand binding domain M0M60_18550 PF12833 Helix-turn-helix domain M0M60_18555 PF02311 AraC-like ligand binding domain M0M60_18555 PF12833 Helix-turn-helix domain M0M60_18565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_18565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_18570 PF06134 L-rhamnose isomerase (RhaA) M0M60_18575 PF00596 Class II Aldolase and Adducin N-terminal domain M0M60_18580 PF00465 Iron-containing alcohol dehydrogenase M0M60_18585 PF05336 L-rhamnose mutarotase M0M60_18590 PF00436 Single-strand binding protein family M0M60_18595 PF00005 ABC transporter M0M60_18595 PF17755 UvrA DNA-binding domain M0M60_18595 PF17760 UvrA interaction domain M0M60_18600 PF04237 YjbR M0M60_18605 PF00155 Aminotransferase class I and II M0M60_18610 PF00842 Alanine racemase, C-terminal domain M0M60_18610 PF01168 Alanine racemase, N-terminal domain M0M60_18615 PF00772 DnaB-like helicase N terminal domain M0M60_18615 PF03796 DnaB-like helicase C terminal domain M0M60_18620 PF08240 Alcohol dehydrogenase GroES-like domain M0M60_18620 PF00107 Zinc-binding dehydrogenase M0M60_18625 PF09583 Phage shock protein G (Phageshock_PspG) M0M60_18630 PF01207 Dihydrouridine synthase (Dus) M0M60_18635 PF01475 Ferric uptake regulator family M0M60_18640 PF01726 LexA DNA binding domain M0M60_18640 PF00717 Peptidase S24-like M0M60_18645 PF01219 Prokaryotic diacylglycerol kinase M0M60_18650 PF01553 Acyltransferase M0M60_18655 PF01040 UbiA prenyltransferase family M0M60_18660 PF04345 Chorismate lyase M0M60_18665 PF12951 Passenger-associated-transport-repeat M0M60_18670 PF08031 Berberine and berberine like M0M60_18670 PF01565 FAD binding domain M0M60_18685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_18690 PF13953 PapC C-terminal domain M0M60_18690 PF13954 PapC N-terminal domain M0M60_18690 PF00577 Outer membrane usher protein M0M60_18700 PF02342 TerD domain M0M60_18705 PF02342 TerD domain M0M60_18710 PF03741 Integral membrane protein TerC family M0M60_18715 PF05099 Tellurite resistance protein TerB M0M60_18720 PF02342 TerD domain M0M60_18725 PF02342 TerD domain M0M60_18745 PF11202 Phosphoribosyl transferase (PRTase) M0M60_18745 PF15608 PELOTA RNA binding domain M0M60_18765 PF04055 Radical SAM superfamily M0M60_18770 PF06228 Haem utilisation ChuX/HutX M0M60_18775 PF13460 NAD(P)H-binding M0M60_18780 PF10636 Hemin uptake protein hemP M0M60_18785 PF07715 TonB-dependent Receptor Plug Domain M0M60_18785 PF00593 TonB dependent receptor M0M60_18790 PF05171 Haemin-degrading HemS.ChuX domain M0M60_18795 PF01497 Periplasmic binding protein M0M60_18800 PF01032 FecCD transport family M0M60_18805 PF00005 ABC transporter M0M60_18810 PF01053 Cys/Met metabolism PLP-dependent enzyme M0M60_18815 PF03222 Tryptophan/tyrosine permease family M0M60_18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_18820 PF03466 LysR substrate binding domain M0M60_18825 PF01206 Sulfurtransferase TusA M0M60_18830 PF04143 Sulphur transport M0M60_18840 PF01312 FlhB HrpN YscU SpaS Family M0M60_18845 PF01311 Bacterial export proteins, family 1 M0M60_18850 PF01313 Bacterial export proteins, family 3 M0M60_18855 PF00813 FliP family M0M60_18860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M0M60_18875 PF18269 T3SS EscN ATPase C-terminal domain M0M60_18875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0M60_18880 PF00771 FHIPEP family M0M60_18895 PF01514 Secretory protein of YscJ/FliF family M0M60_18930 PF00263 Bacterial type II and III secretion system protein M0M60_18930 PF03958 Bacterial type II/III secretion system short domain M0M60_18935 PF00072 Response regulator receiver domain M0M60_18935 PF01627 Hpt domain M0M60_18935 PF00512 His Kinase A (phospho-acceptor) domain M0M60_18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_18935 PF00672 HAMP domain M0M60_18935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M0M60_18940 PF00072 Response regulator receiver domain M0M60_18940 PF00196 Bacterial regulatory proteins, luxR family M0M60_18945 PF00375 Sodium:dicarboxylate symporter family M0M60_18950 PF16177 Acetyl-coenzyme A synthetase N-terminus M0M60_18950 PF00501 AMP-binding enzyme M0M60_18950 PF13193 AMP-binding enzyme C-terminal domain M0M60_18955 PF04341 Protein of unknown function, DUF485 M0M60_18960 PF00474 Sodium:solute symporter family M0M60_18970 PF00665 Integrase core domain M0M60_18970 PF02796 Helix-turn-helix domain of resolvase M0M60_18975 PF01695 IstB-like ATP binding protein M0M60_18980 PF00132 Bacterial transferase hexapeptide (six repeats) M0M60_18985 PF08501 Shikimate dehydrogenase substrate binding domain M0M60_18985 PF01488 Shikimate / quinate 5-dehydrogenase M0M60_18985 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M0M60_18990 PF01300 Telomere recombination M0M60_18995 PF01396 Topoisomerase DNA binding C4 zinc finger M0M60_19000 PF04361 Protein of unknown function (DUF494) M0M60_19005 PF02481 DNA recombination-mediator protein A M0M60_19005 PF17782 DprA winged helix domain M0M60_19010 PF01327 Polypeptide deformylase M0M60_19015 PF02911 Formyl transferase, C-terminal domain M0M60_19015 PF00551 Formyl transferase M0M60_19020 PF01029 NusB family M0M60_19020 PF01189 16S rRNA methyltransferase RsmB/F M0M60_19025 PF02080 TrkA-C domain M0M60_19025 PF02254 TrkA-N domain M0M60_19030 PF01741 Large-conductance mechanosensitive channel, MscL M0M60_19035 PF03889 Alternative ribosome-rescue factor A M0M60_19040 PF13411 MerR HTH family regulatory protein M0M60_19045 PF01196 Ribosomal protein L17 M0M60_19050 PF01000 RNA polymerase Rpb3/RpoA insert domain M0M60_19050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M0M60_19050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M0M60_19055 PF00163 Ribosomal protein S4/S9 N-terminal domain M0M60_19055 PF01479 S4 domain M0M60_19060 PF00411 Ribosomal protein S11 M0M60_19065 PF00416 Ribosomal protein S13/S18 M0M60_19070 PF00444 Ribosomal protein L36 M0M60_19075 PF00344 SecY translocase M0M60_19080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M0M60_19085 PF00327 Ribosomal protein L30p/L7e M0M60_19090 PF03719 Ribosomal protein S5, C-terminal domain M0M60_19090 PF00333 Ribosomal protein S5, N-terminal domain M0M60_19095 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M0M60_19100 PF00347 Ribosomal protein L6 M0M60_19105 PF00410 Ribosomal protein S8 M0M60_19110 PF00253 Ribosomal protein S14p/S29e M0M60_19115 PF00281 Ribosomal protein L5 M0M60_19115 PF00673 ribosomal L5P family C-terminus M0M60_19120 PF00467 KOW motif M0M60_19120 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M0M60_19125 PF00238 Ribosomal protein L14p/L23e M0M60_19130 PF00366 Ribosomal protein S17 M0M60_19135 PF00831 Ribosomal L29 protein M0M60_19140 PF00252 Ribosomal protein L16p/L10e M0M60_19145 PF07650 KH domain M0M60_19145 PF00189 Ribosomal protein S3, C-terminal domain M0M60_19150 PF00237 Ribosomal protein L22p/L17e M0M60_19155 PF00203 Ribosomal protein S19 M0M60_19160 PF03947 Ribosomal Proteins L2, C-terminal domain M0M60_19160 PF00181 Ribosomal Proteins L2, RNA binding domain M0M60_19165 PF00276 Ribosomal protein L23 M0M60_19170 PF00573 Ribosomal protein L4/L1 family M0M60_19175 PF00297 Ribosomal protein L3 M0M60_19180 PF00338 Ribosomal protein S10p/S20e M0M60_19185 PF00210 Ferritin-like domain M0M60_19190 PF04324 BFD-like [2Fe-2S] binding domain M0M60_19195 PF01797 Transposase IS200 like M0M60_19200 PF03144 Elongation factor Tu domain 2 M0M60_19200 PF00009 Elongation factor Tu GTP binding domain M0M60_19200 PF03143 Elongation factor Tu C-terminal domain M0M60_19205 PF00679 Elongation factor G C-terminus M0M60_19205 PF14492 Elongation Factor G, domain II M0M60_19205 PF03764 Elongation factor G, domain IV M0M60_19205 PF00009 Elongation factor Tu GTP binding domain M0M60_19205 PF03144 Elongation factor Tu domain 2 M0M60_19210 PF00177 Ribosomal protein S7p/S5e M0M60_19215 PF00164 Ribosomal protein S12/S23 M0M60_19220 PF04077 DsrH like protein M0M60_19225 PF02635 DsrE/DsrF-like family M0M60_19230 PF02635 DsrE/DsrF-like family M0M60_19235 PF13309 HTH domain M0M60_19235 PF08348 YheO-like PAS domain M0M60_19240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0M60_19240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M0M60_19245 PF04102 SlyX M0M60_19250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M0M60_19255 PF09526 Probable metal-binding protein (DUF2387) M0M60_19260 PF00999 Sodium/hydrogen exchanger family M0M60_19260 PF02254 TrkA-N domain M0M60_19265 PF02525 Flavodoxin-like fold M0M60_19275 PF00535 Glycosyl transferase family 2 M0M60_19285 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M0M60_19290 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_19295 PF00005 ABC transporter M0M60_19300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M0M60_19305 PF01810 LysE type translocator M0M60_19310 PF00561 alpha/beta hydrolase fold M0M60_19315 PF06794 Uncharacterised protein family (UPF0270) M0M60_19320 PF00485 Phosphoribulokinase / Uridine kinase family M0M60_19330 PF02566 OsmC-like protein M0M60_19335 PF13545 Crp-like helix-turn-helix domain M0M60_19335 PF00027 Cyclic nucleotide-binding domain M0M60_19340 PF12805 FUSC-like inner membrane protein yccS M0M60_19345 PF00202 Aminotransferase class-III M0M60_19350 PF00117 Glutamine amidotransferase class-I M0M60_19360 PF01695 IstB-like ATP binding protein M0M60_19365 PF02796 Helix-turn-helix domain of resolvase M0M60_19365 PF00665 Integrase core domain M0M60_19375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M0M60_19380 PF11975 Family 4 glycosyl hydrolase C-terminal domain M0M60_19380 PF02056 Family 4 glycosyl hydrolase M0M60_19385 PF00356 Bacterial regulatory proteins, lacI family M0M60_19395 PF07690 Major Facilitator Superfamily M0M60_19400 PF07969 Amidohydrolase family M0M60_19405 PF18267 Rubredoxin NAD+ reductase C-terminal domain M0M60_19405 PF04324 BFD-like [2Fe-2S] binding domain M0M60_19405 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_19405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M0M60_19405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M0M60_19410 PF13806 Rieske-like [2Fe-2S] domain M0M60_19415 PF01226 Formate/nitrite transporter M0M60_19420 PF10414 Sirohaem synthase dimerisation region M0M60_19420 PF14824 Sirohaem biosynthesis protein central M0M60_19420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0M60_19425 PF00579 tRNA synthetases class I (W and Y) M0M60_19430 PF13419 Haloacid dehalogenase-like hydrolase M0M60_19435 PF00834 Ribulose-phosphate 3 epimerase family M0M60_19440 PF02086 D12 class N6 adenine-specific DNA methyltransferase M0M60_19445 PF05036 Sporulation related domain M0M60_19450 PF01761 3-dehydroquinate synthase M0M60_19455 PF01202 Shikimate kinase M0M60_19460 PF03958 Bacterial type II/III secretion system short domain M0M60_19460 PF00263 Bacterial type II and III secretion system protein M0M60_19490 PF00905 Penicillin binding protein transpeptidase domain M0M60_19490 PF00912 Transglycosylase M0M60_19490 PF17092 Penicillin-binding protein OB-like domain M0M60_19495 PF00293 NUDIX domain M0M60_19500 PF07095 Intracellular growth attenuator protein IgaA M0M60_19505 PF13419 Haloacid dehalogenase-like hydrolase M0M60_19510 PF01479 S4 domain M0M60_19515 PF01430 Hsp33 protein M0M60_19520 PF01293 Phosphoenolpyruvate carboxykinase M0M60_19525 PF00672 HAMP domain M0M60_19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_19525 PF00512 His Kinase A (phospho-acceptor) domain M0M60_19530 PF00486 Transcriptional regulatory protein, C terminal M0M60_19530 PF00072 Response regulator receiver domain M0M60_19535 PF01272 Transcription elongation factor, GreA/GreB, C-term M0M60_19535 PF03449 Transcription elongation factor, N-terminal M0M60_19540 PF00575 S1 RNA binding domain M0M60_19540 PF17674 HHH domain M0M60_19540 PF09371 Tex-like protein N-terminal domain M0M60_19540 PF16921 Tex protein YqgF-like domain M0M60_19545 PF04023 FeoA domain M0M60_19550 PF07664 Ferrous iron transport protein B C terminus M0M60_19550 PF07670 Nucleoside recognition M0M60_19550 PF02421 Ferrous iron transport protein B M0M60_19550 PF17910 FeoB cytosolic helical domain M0M60_19555 PF09012 FeoC like transcriptional regulator M0M60_19560 PF07338 Protein of unknown function (DUF1471) M0M60_19565 PF00561 alpha/beta hydrolase fold M0M60_19570 PF00156 Phosphoribosyl transferase domain M0M60_19575 PF01106 NifU-like domain M0M60_19575 PF01521 Iron-sulphur cluster biosynthesis M0M60_19580 PF02446 4-alpha-glucanotransferase M0M60_19590 PF00196 Bacterial regulatory proteins, luxR family M0M60_19590 PF17874 MalT-like TPR region M0M60_19595 PF00581 Rhodanese-like domain M0M60_19600 PF01694 Rhomboid family M0M60_19600 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease M0M60_19605 PF00455 DeoR C terminal sensor domain M0M60_19605 PF08220 DeoR-like helix-turn-helix domain M0M60_19615 PF02219 Methylenetetrahydrofolate reductase M0M60_19620 PF00742 Homoserine dehydrogenase M0M60_19620 PF00696 Amino acid kinase family M0M60_19620 PF03447 Homoserine dehydrogenase, NAD binding domain M0M60_19630 PF01340 Met Apo-repressor, MetJ M0M60_19635 PF05360 yiaA/B two helix domain M0M60_19640 PF01197 Ribosomal protein L31 M0M60_19645 PF00270 DEAD/DEAH box helicase M0M60_19645 PF00271 Helicase conserved C-terminal domain M0M60_19645 PF17764 3′ DNA-binding domain (3′BD) M0M60_19645 PF18074 Primosomal protein N C-terminal domain M0M60_19645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M0M60_19655 PF00356 Bacterial regulatory proteins, lacI family M0M60_19660 PF05036 Sporulation related domain M0M60_19665 PF00227 Proteasome subunit M0M60_19670 PF00004 ATPase family associated with various cellular activities (AAA) M0M60_19670 PF07724 AAA domain (Cdc48 subfamily) M0M60_19670 PF10431 C-terminal, D2-small domain, of ClpB protein M0M60_19675 PF01040 UbiA prenyltransferase family M0M60_19680 PF03737 Aldolase/RraA M0M60_19695 PF00529 HlyD membrane-fusion protein of T1SS M0M60_19695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M0M60_19705 PF00665 Integrase core domain M0M60_19705 PF02796 Helix-turn-helix domain of resolvase M0M60_19710 PF01695 IstB-like ATP binding protein M0M60_19720 PF01797 Transposase IS200 like M0M60_19725 PF06005 Cell division protein ZapB M0M60_19730 PF00230 Major intrinsic protein M0M60_19735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_19735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_19740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M0M60_19740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M0M60_19745 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M0M60_19750 PF00970 Oxidoreductase FAD-binding domain M0M60_19750 PF00175 Oxidoreductase NAD-binding domain M0M60_19755 PF05656 Protein of unknown function (DUF805) M0M60_19760 PF07305 Protein of unknown function (DUF1454) M0M60_19765 PF00121 Triosephosphate isomerase M0M60_19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_19770 PF03466 LysR substrate binding domain M0M60_19775 PF02585 GlcNAc-PI de-N-acetylase M0M60_19780 PF03737 Aldolase/RraA M0M60_19785 PF00939 Sodium:sulfate symporter transmembrane region M0M60_19800 PF00365 Phosphofructokinase M0M60_19805 PF01545 Cation efflux family M0M60_19805 PF16916 Dimerisation domain of Zinc Transporter M0M60_19815 PF04754 Putative transposase, YhgA-like M0M60_19830 PF07813 LTXXQ motif family protein M0M60_19835 PF00486 Transcriptional regulatory protein, C terminal M0M60_19835 PF00072 Response regulator receiver domain M0M60_19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_19840 PF00672 HAMP domain M0M60_19840 PF16527 Two-component sensor protein CpxA, periplasmic domain M0M60_19840 PF00512 His Kinase A (phospho-acceptor) domain M0M60_19845 PF02805 Metal binding domain of Ada M0M60_19845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M0M60_19845 PF12833 Helix-turn-helix domain M0M60_19845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M0M60_19850 PF00588 SpoU rRNA Methylase family M0M60_19855 PF00132 Bacterial transferase hexapeptide (six repeats) M0M60_19855 PF06426 Serine acetyltransferase, N-terminal M0M60_19860 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M0M60_19860 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M0M60_19865 PF02556 Preprotein translocase subunit SecB M0M60_19870 PF00462 Glutaredoxin M0M60_19875 PF00581 Rhodanese-like domain M0M60_19880 PF01676 Metalloenzyme superfamily M0M60_19880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M0M60_19885 PF01551 Peptidase family M23 M0M60_19895 PF08240 Alcohol dehydrogenase GroES-like domain M0M60_19895 PF00107 Zinc-binding dehydrogenase M0M60_19900 PF00155 Aminotransferase class I and II M0M60_19905 PF01370 NAD dependent epimerase/dehydratase family M0M60_19910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M0M60_19915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M0M60_19920 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M0M60_19925 PF00535 Glycosyl transferase family 2 M0M60_19930 PF01467 Cytidylyltransferase-like M0M60_19935 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M0M60_19935 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M0M60_19935 PF06827 Zinc finger found in FPG and IleRS M0M60_19940 PF00471 Ribosomal protein L33 M0M60_19945 PF00830 Ribosomal L28 family M0M60_19950 PF04002 RadC-like JAB domain M0M60_19955 PF04127 DNA / pantothenate metabolism flavoprotein M0M60_19955 PF02441 Flavoprotein M0M60_19960 PF00692 dUTPase M0M60_19965 PF00440 Bacterial regulatory proteins, tetR family M0M60_19970 PF00156 Phosphoribosyl transferase domain M0M60_19975 PF01797 Transposase IS200 like M0M60_19980 PF01138 3' exoribonuclease family, domain 1 M0M60_19980 PF03725 3' exoribonuclease family, domain 2 M0M60_19985 PF03755 YicC-like family, N-terminal region M0M60_19985 PF08340 Domain of unknown function (DUF1732) M0M60_19990 PF03458 UPF0126 domain M0M60_19995 PF01653 NAD-dependent DNA ligase adenylation domain M0M60_19995 PF03120 NAD-dependent DNA ligase OB-fold domain M0M60_20000 PF00625 Guanylate kinase M0M60_20005 PF01192 RNA polymerase Rpb6 M0M60_20010 PF02824 TGS domain M0M60_20010 PF04607 Region found in RelA / SpoT proteins M0M60_20010 PF13291 ACT domain M0M60_20015 PF12105 SpoU, rRNA methylase, C-terminal M0M60_20015 PF00588 SpoU rRNA Methylase family M0M60_20020 PF00270 DEAD/DEAH box helicase M0M60_20020 PF00271 Helicase conserved C-terminal domain M0M60_20020 PF17191 RecG wedge domain M0M60_20030 PF03616 Sodium/glutamate symporter M0M60_20035 PF00860 Permease family M0M60_20040 PF05170 AsmA family M0M60_20045 PF00583 Acetyltransferase (GNAT) family M0M60_20045 PF09500 Putative thioesterase (yiiD_Cterm) M0M60_20050 PF02796 Helix-turn-helix domain of resolvase M0M60_20050 PF00665 Integrase core domain M0M60_20055 PF01695 IstB-like ATP binding protein M0M60_20065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M0M60_20065 PF03466 LysR substrate binding domain M0M60_20070 PF02678 Pirin M0M60_20070 PF17954 Quercetinase C-terminal cupin domain M0M60_20080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M0M60_20085 PF04348 LppC putative lipoprotein M0M60_20090 PF02021 Uncharacterised protein family UPF0102 M0M60_20095 PF13580 SIS domain M0M60_20100 PF04972 BON domain M0M60_20105 PF00912 Transglycosylase M0M60_20115 PF01627 Hpt domain M0M60_20115 PF18415 Histidine kinase receptor ArcB trans-membrane domain M0M60_20115 PF00512 His Kinase A (phospho-acceptor) domain M0M60_20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_20115 PF00072 Response regulator receiver domain M0M60_20115 PF00989 PAS fold M0M60_20120 PF16199 Radical_SAM C-terminal domain M0M60_20120 PF04055 Radical SAM superfamily M0M60_20125 PF01493 GXGXG motif M0M60_20125 PF00310 Glutamine amidotransferases class-II M0M60_20125 PF04898 Glutamate synthase central domain M0M60_20125 PF01645 Conserved region in glutamate synthase M0M60_20130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M0M60_20130 PF07992 Pyridine nucleotide-disulphide oxidoreductase M0M60_20140 PF04386 Stringent starvation protein B M0M60_20145 PF00043 Glutathione S-transferase, C-terminal domain M0M60_20145 PF02798 Glutathione S-transferase, N-terminal domain M0M60_20155 PF00380 Ribosomal protein S9/S16 M0M60_20160 PF00572 Ribosomal protein L13 M0M60_20165 PF03969 AFG1-like ATPase M0M60_20170 PF06295 Protein of unknown function (DUF1043) M0M60_20175 PF00595 PDZ domain M0M60_20175 PF13180 PDZ domain M0M60_20180 PF01797 Transposase IS200 like M0M60_20185 PF13180 PDZ domain M0M60_20190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M0M60_20195 PF01722 BolA-like protein M0M60_20200 PF13466 STAS domain M0M60_20205 PF05494 MlaC protein M0M60_20210 PF02470 MlaD protein M0M60_20215 PF02405 Permease MlaE M0M60_20220 PF00005 ABC transporter M0M60_20225 PF01699 Sodium/calcium exchanger protein M0M60_20230 PF00571 CBS domain M0M60_20230 PF01380 SIS domain M0M60_20240 PF06835 Lipopolysaccharide-assembly, LptC-related M0M60_20245 PF03968 OstA-like protein M0M60_20250 PF00005 ABC transporter M0M60_20250 PF12399 Branched-chain amino acid ATP-binding cassette transporter M0M60_20255 PF04963 Sigma-54 factor, core binding domain M0M60_20255 PF00309 Sigma-54 factor, Activator interacting domain (AID) M0M60_20255 PF04552 Sigma-54, DNA binding domain M0M60_20265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M0M60_20270 PF03668 P-loop ATPase protein family M0M60_20275 PF00381 PTS HPr component phosphorylation site M0M60_20280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M0M60_20280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M0M60_20285 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M0M60_20285 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M0M60_20290 PF01042 Endoribonuclease L-PSP M0M60_20295 PF02796 Helix-turn-helix domain of resolvase M0M60_20295 PF00665 Integrase core domain M0M60_20300 PF01695 IstB-like ATP binding protein M0M60_20305 PF02580 D-Tyr-tRNA(Tyr) deacylase M0M60_20310 PF03631 Virulence factor BrkB M0M60_20315 PF13419 Haloacid dehalogenase-like hydrolase M0M60_20320 PF00679 Elongation factor G C-terminus M0M60_20320 PF00009 Elongation factor Tu GTP binding domain M0M60_20320 PF03144 Elongation factor Tu domain 2 M0M60_20325 PF03951 Glutamine synthetase, beta-Grasp domain M0M60_20325 PF00120 Glutamine synthetase, catalytic domain M0M60_20330 PF00512 His Kinase A (phospho-acceptor) domain M0M60_20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M0M60_20330 PF00989 PAS fold M0M60_20335 PF02954 Bacterial regulatory protein, Fis family M0M60_20335 PF00158 Sigma-54 interaction domain M0M60_20335 PF00072 Response regulator receiver domain M0M60_20340 PF06969 HemN C-terminal domain M0M60_20340 PF04055 Radical SAM superfamily M0M60_20345 PF04220 Der GTPase activator (YihI) M0M60_20350 PF01926 50S ribosome-binding GTPase M0M60_20355 PF01797 Transposase IS200 like M0M60_20360 PF00476 DNA polymerase family A M0M60_20360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0M60_20360 PF01367 5'-3' exonuclease, C-terminal SAM fold M0M60_20360 PF01612 3'-5' exonuclease M0M60_20365 PF01323 DSBA-like thioredoxin domain M0M60_20370 PF01636 Phosphotransferase enzyme family M0M60_20375 PF06288 Protein of unknown function (DUF1040) M0M60_20380 PF12804 MobA-like NTP transferase domain M0M60_20385 PF03205 Molybdopterin guanine dinucleotide synthesis protein B M0M60_20390 PF00872 Transposase, Mutator family M0M60_20415 PF00392 Bacterial regulatory proteins, gntR family M0M60_20415 PF07729 FCD domain M0M60_20420 PF07690 Major Facilitator Superfamily M0M60_20430 PF00294 pfkB family carbohydrate kinase M0M60_20435 PF05025 RbsD / FucU transport protein family M0M60_20440 PF02705 K+ potassium transporter M0M60_20445 PF07728 AAA domain (dynein-related subfamily) M0M60_20445 PF17868 AAA lid domain M0M60_20445 PF12592 Protein of unknown function (DUF3763) M0M60_20450 PF05762 VWA domain containing CoxE-like protein M0M60_20455 PF03590 Aspartate-ammonia ligase M0M60_20460 PF01037 Lrp/AsnC ligand binding domain M0M60_20465 PF00258 Flavodoxin M0M60_20470 PF01134 Glucose inhibited division protein A M0M60_20470 PF13932 GidA associated domain M0M60_20475 PF02527 rRNA small subunit methyltransferase G M0M60_20480 PF03899 ATP synthase I chain M0M60_20485 PF00119 ATP synthase A chain M0M60_20490 PF00137 ATP synthase subunit C M0M60_20495 PF00430 ATP synthase B/B' CF(0) M0M60_20500 PF00213 ATP synthase delta (OSCP) subunit M0M60_20505 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0M60_20505 PF00306 ATP synthase alpha/beta chain, C terminal domain M0M60_20505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0M60_20510 PF00231 ATP synthase M0M60_20515 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0M60_20515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0M60_20520 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M0M60_20520 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M0M60_20525 PF12804 MobA-like NTP transferase domain M0M60_20525 PF00132 Bacterial transferase hexapeptide (six repeats) M0M60_20530 PF01380 SIS domain M0M60_20535 PF12849 PBP superfamily domain M0M60_20540 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_20545 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_20550 PF00005 ABC transporter M0M60_20555 PF01895 PhoU domain M0M60_20565 PF00497 Bacterial extracellular solute-binding proteins, family 3 M0M60_20570 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_20575 PF00528 Binding-protein-dependent transport system inner membrane component M0M60_20580 PF13419 Haloacid dehalogenase-like hydrolase M0M60_20590 PF00860 Permease family M0M60_20615 PF07055 Enoyl reductase FAD binding domain M0M60_20615 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M0M60_20615 PF12241 Trans-2-enoyl-CoA reductase catalytic region M0M60_20620 PF01926 50S ribosome-binding GTPase M0M60_20620 PF12631 MnmE helical domain M0M60_20620 PF10396 GTP-binding protein TrmE N-terminus M0M60_20625 PF02096 60Kd inner membrane protein M0M60_20625 PF14849 YidC periplasmic domain M0M60_20630 PF01809 Putative membrane protein insertion efficiency factor M0M60_20635 PF00825 Ribonuclease P M0M60_20640 PF00468 Ribosomal protein L34 M0M60_20660 PF02811 PHP domain M0M60_20660 PF14579 Helix-hairpin-helix motif M0M60_20660 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0M60_20660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0M60_20665 PF00665 Integrase core domain M0M60_20665 PF02796 Helix-turn-helix domain of resolvase M0M60_20670 PF01695 IstB-like ATP binding protein M0M60_20705 PF01367 5'-3' exonuclease, C-terminal SAM fold M0M60_20705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M0M60_20715 PF00154 recA bacterial DNA recombination protein M0M60_20760 PF01051 Initiator Replication protein M0M60_20800 PF01797 Transposase IS200 like M0M60_20840 PF17191 RecG wedge domain M0M60_20840 PF00271 Helicase conserved C-terminal domain M0M60_20840 PF00270 DEAD/DEAH box helicase M0M60_20845 PF02195 ParB-like nuclease domain M0M60_20845 PF17762 HTH domain found in ParB protein M0M60_20850 PF02195 ParB-like nuclease domain M0M60_20850 PF17762 HTH domain found in ParB protein M0M60_20855 PF00664 ABC transporter transmembrane region M0M60_20855 PF03412 Peptidase C39 family M0M60_20855 PF00005 ABC transporter M0M60_20980 PF08400 Prophage tail fibre N-terminal M0M60_20980 PF03335 Phage tail fibre repeat M0M60_20980 PF07484 Phage Tail Collar Domain M0M60_20980 PF08400 Prophage tail fibre N-terminal M0M60_20980 PF07484 Phage Tail Collar Domain M0M60_20980 PF03335 Phage tail fibre repeat M0M60_20985 PF02413 Caudovirales tail fibre assembly protein, lambda gpK M0M60_20990 PF01695 IstB-like ATP binding protein M0M60_20995 PF02796 Helix-turn-helix domain of resolvase M0M60_20995 PF00665 Integrase core domain M0M60_21000 PF02811 PHP domain M0M60_21000 PF14579 Helix-hairpin-helix motif M0M60_21000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M0M60_21000 PF07733 Bacterial DNA polymerase III alpha NTPase domain M0M60_21010 PF11775 Cobalamin biosynthesis protein CobT VWA domain M0M60_21010 PF06213 Cobalamin biosynthesis protein CobT M0M60_21030 PF09255 Caf1 Capsule antigen M0M60_21035 PF00577 Outer membrane usher protein M0M60_21035 PF13953 PapC C-terminal domain M0M60_21035 PF13954 PapC N-terminal domain M0M60_21040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M0M60_21040 PF02753 Pili assembly chaperone PapD, C-terminal domain M0M60_21045 PF06445 GyrI-like small molecule binding domain M0M60_21045 PF12833 Helix-turn-helix domain M0M60_21050 PF00872 Transposase, Mutator family M0M60_21060 PF01548 Transposase M0M60_21060 PF02371 Transposase IS116/IS110/IS902 family M0M60_21085 PF13091 PLD-like domain M0M60_21095 PF04754 Putative transposase, YhgA-like M0M60_21100 PF02796 Helix-turn-helix domain of resolvase M0M60_21100 PF00239 Resolvase, N terminal domain M0M60_21115 PF13614 AAA domain M0M60_21115 PF18607 ParA helix turn helix domain M0M60_21120 PF02195 ParB-like nuclease domain M0M60_21120 PF08775 ParB family M0M60_21140 PF01555 DNA methylase M0M60_21150 PF07128 Protein of unknown function (DUF1380) M0M60_21165 PF06006 Bacterial protein of unknown function (DUF905) M0M60_21170 PF02195 ParB-like nuclease domain M0M60_21175 PF02796 Helix-turn-helix domain of resolvase M0M60_21175 PF00665 Integrase core domain M0M60_21180 PF01695 IstB-like ATP binding protein M0M60_21185 PF02413 Caudovirales tail fibre assembly protein, lambda gpK M0M60_21190 PF07484 Phage Tail Collar Domain M0M60_21190 PF03335 Phage tail fibre repeat M0M60_21190 PF03335 Phage tail fibre repeat M0M60_21190 PF08400 Prophage tail fibre N-terminal M0M60_21190 PF07484 Phage Tail Collar Domain M0M60_21190 PF08400 Prophage tail fibre N-terminal M0M60_21230 PF05973 Phage derived protein Gp49-like (DUF891) M0M60_21240 PF01278 Omptin family M0M60_21265 PF01695 IstB-like ATP binding protein M0M60_21270 PF02796 Helix-turn-helix domain of resolvase M0M60_21270 PF00665 Integrase core domain M0M60_21275 PF05973 Phage derived protein Gp49-like (DUF891) M0M60_21285 PF01278 Omptin family M0M60_21305 PF01815 Rop protein M0M60_21310 PF01695 IstB-like ATP binding protein M0M60_21315 PF00665 Integrase core domain M0M60_21315 PF02796 Helix-turn-helix domain of resolvase M0M60_21320 PF05973 Phage derived protein Gp49-like (DUF891) M0M60_21330 PF01278 Omptin family M0M60_21350 PF01815 Rop protein M0M60_21355 PF01695 IstB-like ATP binding protein M0M60_21395 PF01815 Rop protein M0M60_21425 PF01278 Omptin family M0M60_21445 PF01815 Rop protein M0M60_21450 PF01695 IstB-like ATP binding protein M0M60_21465 PF01313 Bacterial export proteins, family 3 M0M60_21470 PF01311 Bacterial export proteins, family 1 M0M60_21480 PF09619 Type III secretion system lipoprotein chaperone (YscW) M0M60_21485 PF02311 AraC-like ligand binding domain M0M60_21485 PF12833 Helix-turn-helix domain M0M60_21490 PF17551 Family of unknown function (DUF5463) M0M60_21495 PF05932 Tir chaperone protein (CesT) family M0M60_21500 PF03958 Bacterial type II/III secretion system short domain M0M60_21500 PF00263 Bacterial type II and III secretion system protein M0M60_21505 PF16697 Inner membrane component of T3SS, cytoplasmic domain M0M60_21505 PF16693 Inner membrane component of T3SS, periplasmic domain M0M60_21510 PF08988 Type III secretion system, cytoplasmic E component of needle M0M60_21515 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF M0M60_21520 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) M0M60_21525 PF09025 YopR, type III needle-polymerisation regulator M0M60_21530 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI M0M60_21535 PF01514 Secretory protein of YscJ/FliF family M0M60_21540 PF06578 YOP proteins translocation protein K (YscK) M0M60_21545 PF02108 Flagellar assembly protein FliH M0M60_21550 PF09013 YopH, N-terminal M0M60_21565 PF09013 YopH, N-terminal M0M60_21565 PF00102 Protein-tyrosine phosphatase M0M60_21585 PF03421 YopJ Serine/Threonine acetyltransferase M0M60_21590 PF00069 Protein kinase domain M0M60_21590 PF09632 Rac1-binding domain M0M60_21615 PF02387 IncFII RepA protein family M0M60_21630 PF10723 Replication regulatory protein RepB M0M60_21655 PF18272 single-stranded DNA binding TraI N-terminal subdomain M0M60_21655 PF07057 DNA helicase TraI M0M60_21655 PF08751 TrwC relaxase M0M60_21655 PF18340 DNA relaxase TraI 2B/2B-like domain M0M60_21665 PF00892 EamA-like transporter family M0M60_21670 PF03895 YadA-like membrane anchor domain M0M60_21670 PF05658 Head domain of trimeric autotransporter adhesin M0M60_21670 PF05662 Coiled stalk of trimeric autotransporter adhesin M0M60_21675 PF05662 Coiled stalk of trimeric autotransporter adhesin M0M60_21675 PF05658 Head domain of trimeric autotransporter adhesin M0M60_21675 PF03895 YadA-like membrane anchor domain M0M60_21685 PF13700 Domain of unknown function (DUF4158) M0M60_21685 PF01526 Tn3 transposase DDE domain M0M60_21690 PF02796 Helix-turn-helix domain of resolvase M0M60_21690 PF00239 Resolvase, N terminal domain M0M60_21725 PF00665 Integrase core domain M0M60_21725 PF02796 Helix-turn-helix domain of resolvase M0M60_21730 PF01695 IstB-like ATP binding protein M0M60_21745 PF05932 Tir chaperone protein (CesT) family M0M60_21750 PF03545 Yersinia virulence determinant (YopE) M0M60_21750 PF09020 YopE, N terminal M0M60_21760 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M0M60_21780 PF02195 ParB-like nuclease domain M0M60_21780 PF18090 Centromere-binding protein HTH domain M0M60_21785 PF13614 AAA domain M0M60_21800 PF05818 Enterobacterial TraT complement resistance protein M0M60_21805 PF05818 Enterobacterial TraT complement resistance protein M0M60_21820 PF03543 Yersinia/Haemophilus virulence surface antigen M0M60_21825 PF05932 Tir chaperone protein (CesT) family M0M60_21850 PF12468 Type III secretion system leucine rich repeat protein M0M60_21865 PF05844 YopD protein M0M60_21870 PF04888 Secretion system effector C (SseC) like family M0M60_21875 PF07720 Tetratricopeptide repeat M0M60_21880 PF04792 V antigen (LcrV) protein M0M60_21885 PF07216 LcrG protein M0M60_21890 PF09621 Type III secretion system regulator (LcrR) M0M60_21895 PF00771 FHIPEP family M0M60_21905 PF09474 Type III secretion system YscX (type_III_YscX) M0M60_21915 PF09059 TyeA M0M60_21920 PF07201 HrpJ-like domain M0M60_21925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M0M60_21925 PF02874 ATP synthase alpha/beta family, beta-barrel domain M0M60_21925 PF18269 T3SS EscN ATPase C-terminal domain M0M60_21930 PF07321 Type III secretion protein YscO M0M60_21935 PF02120 Flagellar hook-length control protein FliK M0M60_21940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term