CH55_1 IPR005616 Cytochrome C biogenesis protein CcmH CH55_1 IPR038297 CH55_1 CH55_10 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_10 IPR004556 Modification methylase HemK CH55_10 IPR007848 Methyltransferase small domain CH55_10 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CH55_10 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_100 IPR002177 DNA-binding protein Dps CH55_100 IPR008331 Ferritin/DPS protein domain CH55_100 IPR009078 Ferritin-like superfamily CH55_100 IPR012347 Ferritin-related CH55_100 IPR023067 DNA protection during starvation protein, gammaproteobacteria CH55_100 IPR023188 DNA-binding protein Dps, conserved site CH55_1000 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CH55_1000 IPR022770 Ferric iron reductase FhuF domain CH55_1001 IPR000531 TonB-dependent receptor, beta-barrel CH55_1001 IPR010105 TonB-dependent siderophore receptor CH55_1001 IPR010917 TonB-dependent receptor, conserved site CH55_1001 IPR012910 TonB-dependent receptor, plug CH55_1001 IPR036942 CH55_1001 CH55_1001 IPR037066 CH55_1001 CH55_1002 IPR002491 ABC transporter periplasmic binding domain CH55_1003 IPR000522 ABC transporter, permease protein CH55_1003 IPR037294 CH55_1003 CH55_1004 IPR000522 ABC transporter, permease protein CH55_1004 IPR037294 CH55_1004 CH55_1005 IPR003439 ABC transporter-like CH55_1005 IPR003593 AAA+ ATPase domain CH55_1005 IPR017871 ABC transporter, conserved site CH55_1005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1006 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CH55_1006 IPR022770 Ferric iron reductase FhuF domain CH55_1007 IPR016181 Acyl-CoA N-acyltransferase CH55_1007 IPR019432 Siderophore biosynthesis protein, conserved domain CH55_1008 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CH55_1008 IPR036188 CH55_1008 CH55_1009 IPR002129 Pyridoxal phosphate-dependent decarboxylase CH55_1009 IPR010977 Aromatic-L-amino-acid decarboxylase CH55_1009 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1009 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1009 IPR015424 Pyridoxal phosphate-dependent transferase CH55_101 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal CH55_101 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1010 IPR008090 Ferric iron reductase CH55_1010 IPR022770 Ferric iron reductase FhuF domain CH55_1010 IPR024726 Ferric iron reductase, C-terminal CH55_1011 IPR000644 CBS domain CH55_1011 IPR005170 Transporter-associated domain CH55_1011 IPR005496 Integral membrane protein TerC CH55_1011 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_1011 IPR036318 CH55_1011 CH55_1012 IPR007844 AsmA CH55_1012 IPR032712 CH55_1012 CH55_1013 IPR011962 Deoxycytidine triphosphate deaminase CH55_1013 IPR029054 dUTPase-like CH55_1013 IPR036157 CH55_1013 CH55_1014 IPR000764 Uridine kinase like CH55_1014 IPR006083 Phosphoribulokinase/uridine kinase CH55_1014 IPR026008 Uridine kinase CH55_1014 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1015 IPR000808 Mrp, conserved site CH55_1015 IPR019591 Mrp/NBP35 ATP-binding protein CH55_1015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1015 IPR033756 CH55_1015 CH55_1015 IPR034904 CH55_1015 CH55_1016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_1016 IPR002547 tRNA-binding domain CH55_1016 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal CH55_1016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CH55_1016 IPR012340 Nucleic acid-binding, OB-fold CH55_1016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1016 IPR014758 Methionyl-tRNA synthetase CH55_1016 IPR015413 Methionyl/Leucyl tRNA synthetase CH55_1016 IPR023458 Methionine-tRNA ligase, type 1 CH55_1016 IPR029038 Methionyl-tRNA synthetase, Zn-domain CH55_1016 IPR033911 CH55_1016 CH55_1017 IPR002686 Transposase IS200-like CH55_1017 IPR036515 CH55_1017 CH55_1019 IPR025997 Periplasmic binding protein domain CH55_1019 IPR028082 Periplasmic binding protein-like I CH55_102 IPR000182 GNAT domain CH55_102 IPR016181 Acyl-CoA N-acyltransferase CH55_1020 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CH55_1020 IPR013211 LVIVD CH55_1022 IPR011701 Major facilitator superfamily CH55_1022 IPR036259 CH55_1022 CH55_1023 IPR005538 LrgA/CidA family CH55_1023 IPR022957 Uncharacterised protein family UPF0299 CH55_1024 IPR005261 Conserved hypothetical protein CHP00659 CH55_1024 IPR007300 CidB/LrgB family CH55_1025 IPR002125 CMP/dCMP deaminase, zinc-binding CH55_1025 IPR006263 Cytidine deaminase, homodimeric CH55_1025 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain CH55_1025 IPR016192 APOBEC/CMP deaminase, zinc-binding CH55_1025 IPR016193 Cytidine deaminase-like CH55_1025 IPR020797 Cytidine deaminase, bacteria CH55_1026 IPR001891 Malic oxidoreductase CH55_1026 IPR012301 Malic enzyme, N-terminal domain CH55_1026 IPR012302 Malic enzyme, NAD-binding CH55_1026 IPR015884 Malic enzyme, conserved site CH55_1026 IPR023667 NAD-dependent malic enzyme, proteobacteria CH55_1026 IPR036291 CH55_1026 CH55_1026 IPR037062 CH55_1026 CH55_1027 IPR003848 Domain of unknown function DUF218 CH55_1027 IPR023604 Uncharacterised protein family SanA CH55_1028 IPR001851 ABC transporter, permease CH55_1029 IPR003439 ABC transporter-like CH55_1029 IPR003593 AAA+ ATPase domain CH55_1029 IPR017871 ABC transporter, conserved site CH55_1029 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_103 IPR000620 Drug/metabolite transporter CH55_1030 IPR025997 Periplasmic binding protein domain CH55_1030 IPR028082 Periplasmic binding protein-like I CH55_1031 IPR007349 Domain of unknown function DUF418 CH55_1032 IPR001474 GTP cyclohydrolase I CH55_1032 IPR018234 GTP cyclohydrolase I, conserved site CH55_1032 IPR020602 GTP cyclohydrolase I domain CH55_1033 IPR010645 Domain of unknown function DUF1228 CH55_1033 IPR036259 CH55_1033 CH55_1034 IPR000847 Transcription regulator HTH, LysR CH55_1034 IPR005119 LysR, substrate-binding CH55_1034 IPR036388 CH55_1034 CH55_1034 IPR036390 CH55_1034 CH55_1035 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CH55_1035 IPR011032 GroES (chaperonin 10)-like CH55_1035 IPR013149 Alcohol dehydrogenase, C-terminal CH55_1035 IPR013154 Alcohol dehydrogenase GroES-like CH55_1035 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase CH55_1035 IPR020843 Polyketide synthase, enoylreductase CH55_1035 IPR036291 CH55_1035 CH55_1036 IPR000801 Putative esterase CH55_1036 IPR014186 S-formylglutathione hydrolase CH55_1036 IPR029058 Alpha/Beta hydrolase fold CH55_104 IPR000758 Virulence-related outer membrane protein CH55_104 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_104 IPR027385 Outer membrane protein beta-barrel CH55_1040 IPR003439 ABC transporter-like CH55_1040 IPR003593 AAA+ ATPase domain CH55_1040 IPR017871 ABC transporter, conserved site CH55_1040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1041 IPR007197 Radical SAM CH55_1041 IPR013785 Aldolase-type TIM barrel CH55_1041 IPR023885 4Fe4S-binding SPASM domain CH55_1042 IPR001453 Molybdopterin binding domain CH55_1042 IPR005110 MoeA, N-terminal and linker domain CH55_1042 IPR005111 MoeA, C-terminal, domain IV CH55_1042 IPR008284 Molybdenum cofactor biosynthesis, conserved site CH55_1042 IPR036135 CH55_1042 CH55_1042 IPR036425 CH55_1042 CH55_1042 IPR036688 CH55_1042 CH55_1043 IPR000594 UBA/THIF-type NAD/FAD binding fold CH55_1043 IPR012730 Molybdopterin synthase sulfurylase MoeB CH55_1043 IPR035985 CH55_1043 CH55_1044 IPR001207 Transposase, mutator type CH55_1045 IPR001207 Transposase, mutator type CH55_1046 IPR031829 CH55_1046 CH55_1047 IPR003439 ABC transporter-like CH55_1047 IPR003593 AAA+ ATPase domain CH55_1047 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1047 IPR032781 CH55_1047 CH55_1048 IPR031829 CH55_1048 CH55_1048 IPR038334 CH55_1048 CH55_1049 IPR010657 ImpA, N-terminal CH55_1049 IPR021069 ImpA, C-terminal CH55_105 IPR002524 Cation efflux protein CH55_105 IPR027469 Cation efflux protein transmembrane domain CH55_1050 IPR007048 GpW/Gp25/anti-adapter protein IraD CH55_1050 IPR017737 Type VI secretion system, lysozyme-related protein CH55_1051 IPR017734 Type VI secretion system, lipoprotein SciN CH55_1051 IPR038706 CH55_1051 CH55_1052 IPR010732 Protein of unknown function DUF1305 CH55_1053 IPR010272 Type VI secretion system, VCA0110 CH55_1055 IPR008727 PAAR motif CH55_1055 IPR028946 Putative toxin 60 CH55_1056 IPR010657 ImpA, N-terminal CH55_1056 IPR017739 Type VI secretion system-associated, VCA0119 CH55_1057 IPR010623 Domain of unknown function DUF1215 CH55_1058 IPR009612 ImcF-related CH55_1058 IPR010623 Domain of unknown function DUF1215 CH55_106 IPR031829 CH55_106 CH55_106 IPR038334 CH55_106 CH55_1061 IPR011055 Duplicated hybrid motif CH55_1061 IPR016047 Peptidase M23 CH55_1061 IPR023346 Lysozyme-like domain CH55_1063 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CH55_1065 IPR011055 Duplicated hybrid motif CH55_1065 IPR016047 Peptidase M23 CH55_1065 IPR023346 Lysozyme-like domain CH55_1066 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH55_1066 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH55_1066 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CH55_1066 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CH55_1066 IPR037026 CH55_1066 CH55_1067 IPR001270 ClpA/B family CH55_1067 IPR003593 AAA+ ATPase domain CH55_1067 IPR003959 ATPase, AAA-type, core CH55_1067 IPR017729 Type VI secretion system, ATPase ClpV1 CH55_1067 IPR018368 ClpA/B, conserved site 1 CH55_1067 IPR019489 Clp ATPase, C-terminal CH55_1067 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1067 IPR036628 CH55_1067 CH55_1068 IPR008514 Type VI secretion system effector, Hcp CH55_1068 IPR036624 CH55_1068 CH55_1069 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_1069 IPR036737 CH55_1069 CH55_107 IPR031829 CH55_107 CH55_107 IPR038334 CH55_107 CH55_1070 IPR017732 Type IV / VI secretion system, DotU CH55_1070 IPR038522 CH55_1070 CH55_1071 IPR010263 Protein of unknown function DUF876 CH55_1072 IPR010269 Protein of unknown function DUF877 CH55_1074 IPR008312 Uncharacterised conserved protein UCP028301 CH55_1076 IPR001227 Acyl transferase domain CH55_1076 IPR014043 Acyl transferase CH55_1076 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH55_1076 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CH55_1076 IPR020801 Polyketide synthase, acyl transferase domain CH55_1076 IPR024925 Malonyl CoA-acyl carrier protein transacylase CH55_1077 IPR009081 Acyl carrier protein-like CH55_1077 IPR036736 CH55_1077 CH55_1078 IPR024311 Lipocalin-like domain CH55_1079 IPR002347 Glucose/ribitol dehydrogenase CH55_1079 IPR036291 CH55_1079 CH55_108 IPR011032 GroES (chaperonin 10)-like CH55_108 IPR013149 Alcohol dehydrogenase, C-terminal CH55_108 IPR013154 Alcohol dehydrogenase GroES-like CH55_108 IPR020843 Polyketide synthase, enoylreductase CH55_108 IPR036291 CH55_108 CH55_1080 IPR001753 Crotonase superfamily CH55_1080 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CH55_1080 IPR029045 ClpP/crotonase-like domain CH55_1081 IPR001753 Crotonase superfamily CH55_1081 IPR029045 ClpP/crotonase-like domain CH55_1082 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal CH55_1082 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain CH55_1082 IPR016039 Thiolase-like CH55_1083 IPR002347 Glucose/ribitol dehydrogenase CH55_1083 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_1083 IPR036291 CH55_1083 CH55_1084 IPR014030 Beta-ketoacyl synthase, N-terminal CH55_1084 IPR014031 Beta-ketoacyl synthase, C-terminal CH55_1084 IPR016039 Thiolase-like CH55_1084 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH55_1085 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CH55_1085 IPR029069 HotDog domain CH55_1087 IPR002347 Glucose/ribitol dehydrogenase CH55_1087 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_1087 IPR036291 CH55_1087 CH55_1088 IPR006093 Oxygen oxidoreductase covalent FAD-binding site CH55_1088 IPR006094 FAD linked oxidase, N-terminal CH55_1088 IPR016167 FAD-binding, type 2, subdomain 1 CH55_1088 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_1088 IPR016181 Acyl-CoA N-acyltransferase CH55_1088 IPR036318 CH55_1088 CH55_1088 IPR038740 CH55_1088 CH55_1089 IPR012951 Berberine/berberine-like CH55_1089 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_109 IPR025997 Periplasmic binding protein domain CH55_109 IPR028082 Periplasmic binding protein-like I CH55_1093 IPR012337 Ribonuclease H-like domain CH55_1093 IPR032874 CH55_1093 CH55_1095 IPR007453 Sulphur transfer protein DsrC/TusE CH55_1095 IPR025526 DsrC-like domain CH55_1096 IPR001792 Acylphosphatase-like domain CH55_1096 IPR017968 Acylphosphatase, conserved site CH55_1096 IPR020456 Acylphosphatase CH55_1096 IPR028627 Acylphosphatase, bacteria CH55_1096 IPR036046 CH55_1096 CH55_1097 IPR002478 PUA domain CH55_1097 IPR015947 PUA-like domain CH55_1097 IPR019614 S-adenosylmethionine-dependent methyltransferase CH55_1097 IPR023542 rRNA large subunit methyltransferase I CH55_1097 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1097 IPR036974 CH55_1097 CH55_1098 IPR011722 Hemimethylated DNA-binding domain CH55_1098 IPR022866 Heat shock protein HspQ CH55_1098 IPR036623 CH55_1098 CH55_1099 IPR003781 CoA-binding CH55_1099 IPR036291 CH55_1099 CH55_11 IPR000453 Chorismate synthase CH55_11 IPR020541 Chorismate synthase, conserved site CH55_11 IPR035904 CH55_11 CH55_110 IPR003439 ABC transporter-like CH55_110 IPR003593 AAA+ ATPase domain CH55_110 IPR017871 ABC transporter, conserved site CH55_110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1100 IPR018635 Uncharacterised protein family UPF0319 CH55_1101 IPR004363 Methylglyoxal synthase CH55_1101 IPR011607 Methylglyoxal synthase-like domain CH55_1101 IPR018148 Methylglyoxal synthase, active site CH55_1101 IPR036914 CH55_1101 CH55_1102 IPR014017 DNA helicase, UvrD-like, C-terminal CH55_1102 IPR022161 DNA helicase IV, N-terminal domain CH55_1102 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1102 IPR034739 CH55_1102 CH55_1103 IPR005185 Protein of unknown function DUF307 CH55_1103 IPR031308 CH55_1103 CH55_1104 IPR010019 Integral membrane protein, YccS CH55_1104 IPR010020 Integral membrane protein, YccS/YhfK CH55_1104 IPR032692 CH55_1104 CH55_1105 IPR007076 TfoX, N-terminal CH55_1105 IPR007077 TfoX, C-terminal CH55_1105 IPR026256 Transcriptional regulator, TfoX/Sxy-type CH55_1106 IPR004596 Cell division suppressor protein, SulA CH55_1106 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1107 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain CH55_1107 IPR002368 Outer membrane protein, OmpA CH55_1107 IPR006664 Outer membrane protein, bacterial CH55_1107 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_1107 IPR006690 Outer membrane protein, OmpA-like, conserved site CH55_1107 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_1107 IPR036737 CH55_1107 CH55_1108 IPR002686 Transposase IS200-like CH55_1108 IPR036515 CH55_1108 CH55_1109 IPR009390 Macrodomain Ter protein, MatP CH55_1109 IPR013321 Arc-type ribbon-helix-helix CH55_1109 IPR035087 CH55_1109 CH55_1109 IPR035375 CH55_1109 CH55_1109 IPR038339 CH55_1109 CH55_111 IPR001851 ABC transporter, permease CH55_1110 IPR008269 Peptidase S16, Lon C-terminal CH55_1110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_1110 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_1111 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CH55_1111 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CH55_1111 IPR029069 HotDog domain CH55_1113 IPR014030 Beta-ketoacyl synthase, N-terminal CH55_1113 IPR016039 Thiolase-like CH55_1114 IPR001584 Integrase, catalytic core CH55_1114 IPR006120 Resolvase, HTH domain CH55_1114 IPR009057 Homeodomain-like CH55_1114 IPR012337 Ribonuclease H-like domain CH55_1115 IPR002611 IstB-like ATP-binding protein CH55_1115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1116 IPR002611 IstB-like ATP-binding protein CH55_1117 IPR014030 Beta-ketoacyl synthase, N-terminal CH55_1117 IPR014031 Beta-ketoacyl synthase, C-terminal CH55_1117 IPR016039 Thiolase-like CH55_1117 IPR018201 Beta-ketoacyl synthase, active site CH55_1117 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH55_1118 IPR002686 Transposase IS200-like CH55_1118 IPR036515 CH55_1118 CH55_1119 IPR005586 Protein of unknown function DUF330 CH55_112 IPR000843 Transcription regulator HTH, LacI CH55_112 IPR010982 Lambda repressor-like, DNA-binding domain CH55_112 IPR025997 Periplasmic binding protein domain CH55_112 IPR028082 Periplasmic binding protein-like I CH55_1120 IPR003399 Mammalian cell entry-related CH55_1121 IPR005219 Conserved hypothetical protein CHP00155 CH55_1121 IPR007498 Paraquat-inducible protein A CH55_1122 IPR003439 ABC transporter-like CH55_1122 IPR003593 AAA+ ATPase domain CH55_1122 IPR017871 ABC transporter, conserved site CH55_1122 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1122 IPR032524 CH55_1122 CH55_1122 IPR032781 CH55_1122 CH55_1122 IPR037118 CH55_1122 CH55_1123 IPR000241 Putative RNA methylase domain CH55_1123 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_1123 IPR004114 THUMP CH55_1123 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CH55_1123 IPR019614 S-adenosylmethionine-dependent methyltransferase CH55_1123 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1124 IPR001041 2Fe-2S ferredoxin-type domain CH55_1124 IPR005302 Molybdenum cofactor sulfurase, C-terminal CH55_1124 IPR005303 MOSC, N-terminal beta barrel CH55_1124 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH55_1124 IPR011037 Pyruvate kinase-like, insert domain CH55_1124 IPR012675 Beta-grasp domain CH55_1124 IPR036010 CH55_1124 CH55_1125 IPR009809 Cell division protein ZapC CH55_1126 IPR001295 Dihydroorotate dehydrogenase, conserved site CH55_1126 IPR005719 Dihydroorotate dehydrogenase, class 2 CH55_1126 IPR005720 Dihydroorotate dehydrogenase domain CH55_1126 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CH55_1126 IPR013785 Aldolase-type TIM barrel CH55_1127 IPR012779 Peptidase M1, alanyl aminopeptidase CH55_1127 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CH55_1127 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CH55_1127 IPR027268 CH55_1127 CH55_1127 IPR035414 CH55_1127 CH55_1127 IPR037144 CH55_1127 CH55_1127 IPR038438 CH55_1127 CH55_1128 IPR006406 Nicotinate phosphoribosyltransferase CH55_1128 IPR007229 Nicotinate phosphoribosyltransferase family CH55_1128 IPR036068 CH55_1128 CH55_1129 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CH55_1129 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH55_1129 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH55_1129 IPR004522 Asparagine-tRNA ligase CH55_1129 IPR012340 Nucleic acid-binding, OB-fold CH55_113 IPR000847 Transcription regulator HTH, LysR CH55_113 IPR005119 LysR, substrate-binding CH55_113 IPR036388 CH55_113 CH55_113 IPR036390 CH55_113 CH55_1130 IPR001702 Porin, Gram-negative type CH55_1130 IPR001897 Porin, gammaproteobacterial CH55_1130 IPR013793 Porin, Gram-negative type, conserved site CH55_1130 IPR023614 Porin domain CH55_1131 IPR000796 Aspartate/other aminotransferase CH55_1131 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CH55_1131 IPR004839 Aminotransferase, class I/classII CH55_1131 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1131 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1131 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1132 IPR001279 Beta-lactamase-like CH55_1132 IPR036866 CH55_1132 CH55_1133 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CH55_1133 IPR010275 Protein of unknown function DUF882 CH55_1134 IPR002477 Peptidoglycan binding-like CH55_1134 IPR005490 L,D-transpeptidase catalytic domain CH55_1134 IPR036365 CH55_1134 CH55_1134 IPR038063 CH55_1134 CH55_1135 IPR002686 Transposase IS200-like CH55_1135 IPR036515 CH55_1135 CH55_1136 IPR007406 MukB, N-terminal domain CH55_1136 IPR012090 Chromosome partition protein MukB CH55_1136 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1136 IPR032520 CH55_1136 CH55_1137 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE CH55_1138 IPR005582 Chromosome partition protein MukF CH55_1138 IPR010916 TonB box, conserved site CH55_1138 IPR033439 CH55_1138 CH55_1138 IPR033440 CH55_1138 CH55_1138 IPR033441 CH55_1138 CH55_1138 IPR036141 CH55_1138 CH55_1138 IPR036388 CH55_1138 CH55_1138 IPR036390 CH55_1138 CH55_1138 IPR038198 CH55_1138 CH55_1139 IPR025714 Methyltransferase domain CH55_1139 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1139 IPR033664 CH55_1139 CH55_114 IPR011829 Tartrate dehydrogenase CH55_114 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CH55_114 IPR024084 Isopropylmalate dehydrogenase-like domain CH55_1140 IPR011009 Protein kinase-like domain CH55_1140 IPR016477 Fructosamine/Ketosamine-3-kinase CH55_1141 IPR003329 Acylneuraminate cytidylyltransferase CH55_1141 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CH55_1141 IPR029044 Nucleotide-diphospho-sugar transferases CH55_1142 IPR005651 Uncharacterised protein family UPF0434/Trm112 CH55_1142 IPR038053 CH55_1142 CH55_1143 IPR002059 Cold-shock protein, DNA-binding CH55_1143 IPR011129 Cold shock protein CH55_1143 IPR012156 Cold shock, CspA CH55_1143 IPR012340 Nucleic acid-binding, OB-fold CH55_1144 IPR009770 Domain of unknown function DUF1338 CH55_1145 IPR003758 Tetraacyldisaccharide 4'-kinase CH55_1145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1146 IPR003439 ABC transporter-like CH55_1146 IPR003593 AAA+ ATPase domain CH55_1146 IPR011527 ABC transporter type 1, transmembrane domain CH55_1146 IPR011917 ABC transporter, lipid A export, MsbA CH55_1146 IPR017871 ABC transporter, conserved site CH55_1146 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1146 IPR036640 CH55_1146 CH55_1147 IPR001279 Beta-lactamase-like CH55_1147 IPR004477 ComEC/Rec2-related protein CH55_1147 IPR004797 Competence protein ComEC/Rec2 CH55_1147 IPR036866 CH55_1147 CH55_1149 IPR000119 Histone-like bacterial DNA-binding protein CH55_1149 IPR005685 Integration host factor, beta subunit CH55_1149 IPR010992 Integration host factor (IHF)-like DNA-binding domain CH55_1149 IPR020816 Histone-like DNA-binding protein, conserved site CH55_115 IPR000060 BCCT transporter family CH55_115 IPR018093 BCCT transporter, conserved site CH55_1151 IPR000110 Ribosomal protein S1 CH55_1151 IPR003029 Ribosomal protein S1, RNA-binding domain CH55_1151 IPR012340 Nucleic acid-binding, OB-fold CH55_1151 IPR022967 RNA-binding domain, S1 CH55_1152 IPR003136 Cytidylate kinase CH55_1152 IPR011994 Cytidylate kinase domain CH55_1152 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1153 IPR001986 Enolpyruvate transferase domain CH55_1153 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CH55_1153 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CH55_1153 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CH55_1153 IPR036968 CH55_1153 CH55_1154 IPR000192 Aminotransferase class V domain CH55_1154 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1154 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1154 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1154 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CH55_1154 IPR022278 Phosphoserine aminotransferase CH55_1155 IPR005594 YadA-like, C-terminal CH55_1155 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_1156 IPR005594 YadA-like, C-terminal CH55_1156 IPR008126 Outer membrane adhesion, Yersinia CH55_1156 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_1157 IPR004550 L-asparaginase, type II CH55_1157 IPR006034 Asparaginase/glutaminase CH55_1157 IPR020827 Asparaginase/glutaminase, active site 1 CH55_1157 IPR027473 L-asparaginase, C-terminal domain CH55_1157 IPR027474 L-asparaginase, N-terminal CH55_1157 IPR027475 Asparaginase/glutaminase, active site 2 CH55_1157 IPR036152 CH55_1157 CH55_1157 IPR037152 CH55_1157 CH55_1158 IPR003776 YcaO-like domain CH55_1159 IPR000292 Formate/nitrite transporter CH55_1159 IPR023271 Aquaporin-like CH55_1159 IPR023999 Formate transporter FocA, putative CH55_1159 IPR024002 Formate/nitrite transporter, conserved site CH55_116 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CH55_116 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CH55_116 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CH55_116 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CH55_116 IPR036922 CH55_116 CH55_1160 IPR001150 Glycine radical domain CH55_1160 IPR004184 Pyruvate formate lyase domain CH55_1160 IPR005949 Formate acetyltransferase CH55_1160 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH55_1161 IPR002654 Glycosyl transferase, family 25 CH55_1162 IPR001989 Radical-activating enzyme, conserved site CH55_1162 IPR007197 Radical SAM CH55_1162 IPR012838 Pyruvate formate-lyase activating enzyme CH55_1162 IPR013785 Aldolase-type TIM barrel CH55_1163 IPR011701 Major facilitator superfamily CH55_1163 IPR036259 CH55_1163 CH55_1164 IPR001584 Integrase, catalytic core CH55_1164 IPR006120 Resolvase, HTH domain CH55_1164 IPR009057 Homeodomain-like CH55_1164 IPR012337 Ribonuclease H-like domain CH55_1165 IPR002611 IstB-like ATP-binding protein CH55_1165 IPR003593 AAA+ ATPase domain CH55_1165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1166 IPR011701 Major facilitator superfamily CH55_1166 IPR036259 CH55_1166 CH55_1167 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CH55_1167 IPR002317 Serine-tRNA ligase, type1 CH55_1167 IPR010978 tRNA-binding arm CH55_1167 IPR015866 Serine-tRNA synthetase, type1, N-terminal CH55_1168 IPR003593 AAA+ ATPase domain CH55_1168 IPR003959 ATPase, AAA-type, core CH55_1168 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH55_1168 IPR021886 MgsA AAA+ ATPase C-terminal CH55_1168 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1168 IPR032423 CH55_1168 CH55_117 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CH55_1170 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CH55_1170 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CH55_1170 IPR029046 Lipoprotein localisation LolA/LolB/LppX CH55_1171 IPR002543 FtsK domain CH55_1171 IPR018541 FtsK gamma domain CH55_1171 IPR025199 Domain of unknown function DUF4117 CH55_1171 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1171 IPR036388 CH55_1171 CH55_1171 IPR036390 CH55_1171 CH55_1172 IPR000485 AsnC-type HTH domain CH55_1172 IPR011008 Dimeric alpha-beta barrel CH55_1172 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CH55_1172 IPR019887 Transcription regulator AsnC-type, C-terminal CH55_1172 IPR019888 Transcription regulator AsnC-type CH55_1172 IPR036388 CH55_1172 CH55_1172 IPR036390 CH55_1172 CH55_1173 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CH55_1173 IPR005982 Thioredoxin reductase CH55_1173 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CH55_1173 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_1173 IPR036188 CH55_1173 CH55_1174 IPR003439 ABC transporter-like CH55_1174 IPR003593 AAA+ ATPase domain CH55_1174 IPR011527 ABC transporter type 1, transmembrane domain CH55_1174 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CH55_1174 IPR017871 ABC transporter, conserved site CH55_1174 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1174 IPR036640 CH55_1174 CH55_1175 IPR003439 ABC transporter-like CH55_1175 IPR003593 AAA+ ATPase domain CH55_1175 IPR011527 ABC transporter type 1, transmembrane domain CH55_1175 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CH55_1175 IPR017871 ABC transporter, conserved site CH55_1175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1175 IPR036640 CH55_1175 CH55_1176 IPR016181 Acyl-CoA N-acyltransferase CH55_1177 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CH55_1177 IPR016181 Acyl-CoA N-acyltransferase CH55_1178 IPR004368 Translation initiation factor IF-1 CH55_1178 IPR006196 RNA-binding domain, S1, IF1 type CH55_1178 IPR012340 Nucleic acid-binding, OB-fold CH55_1178 IPR022967 RNA-binding domain, S1 CH55_1179 IPR002686 Transposase IS200-like CH55_1179 IPR036515 CH55_1179 CH55_118 IPR000951 Phthalate dioxygenase reductase CH55_118 IPR001041 2Fe-2S ferredoxin-type domain CH55_118 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_118 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH55_118 IPR008333 Oxidoreductase, FAD-binding domain CH55_118 IPR012675 Beta-grasp domain CH55_118 IPR017938 Riboflavin synthase-like beta-barrel CH55_118 IPR036010 CH55_118 CH55_118 IPR039003 CH55_118 CH55_118 IPR039261 CH55_118 CH55_1180 IPR001270 ClpA/B family CH55_1180 IPR003593 AAA+ ATPase domain CH55_1180 IPR003959 ATPase, AAA-type, core CH55_1180 IPR004176 Clp, N-terminal CH55_1180 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CH55_1180 IPR018368 ClpA/B, conserved site 1 CH55_1180 IPR019489 Clp ATPase, C-terminal CH55_1180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1180 IPR028299 ClpA/B, conserved site 2 CH55_1180 IPR036628 CH55_1180 CH55_1181 IPR003769 Adaptor protein ClpS, core CH55_1181 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH55_1181 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CH55_1182 IPR002059 Cold-shock protein, DNA-binding CH55_1182 IPR011129 Cold shock protein CH55_1182 IPR012156 Cold shock, CspA CH55_1182 IPR012340 Nucleic acid-binding, OB-fold CH55_1182 IPR012751 CspD, cold shock CH55_1182 IPR019844 Cold-shock conserved site CH55_1183 IPR003439 ABC transporter-like CH55_1183 IPR003593 AAA+ ATPase domain CH55_1183 IPR003838 Permease FtsX-like CH55_1183 IPR017871 ABC transporter, conserved site CH55_1183 IPR025857 MacB-like periplasmic core domain CH55_1183 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1184 IPR006143 RND efflux pump, membrane fusion protein CH55_1184 IPR032317 CH55_1184 CH55_1185 IPR007488 Protein of unknown function DUF535 CH55_1186 IPR022602 Protein of unknown function DUF2813 CH55_1186 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1187 IPR005642 Protein of unknown function DUF340, prokaryotic membrane CH55_1188 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase CH55_1188 IPR010048 Hydroxylamine reductase CH55_1188 IPR011254 Prismane-like CH55_1188 IPR016099 Prismane-like, alpha/beta-sandwich CH55_1188 IPR016100 Prismane, alpha-bundle CH55_1189 IPR001041 2Fe-2S ferredoxin-type domain CH55_1189 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_1189 IPR001834 NADH:cytochrome b5 reductase (CBR) CH55_1189 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH55_1189 IPR008333 Oxidoreductase, FAD-binding domain CH55_1189 IPR012675 Beta-grasp domain CH55_1189 IPR017938 Riboflavin synthase-like beta-barrel CH55_1189 IPR036010 CH55_1189 CH55_1189 IPR039261 CH55_1189 CH55_119 IPR005565 Haemolysin activator HlyB CH55_119 IPR013686 Polypeptide-transport-associated, ShlB-type CH55_119 IPR027282 Two partner secretion pathway transporter CH55_119 IPR035251 CH55_119 CH55_1190 IPR000399 TPP-binding enzyme, conserved site CH55_1190 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH55_1190 IPR012000 Thiamine pyrophosphate enzyme, central domain CH55_1190 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH55_1190 IPR029035 DHS-like NAD/FAD-binding domain CH55_1190 IPR029061 Thiamin diphosphate-binding fold CH55_1191 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CH55_1191 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1191 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1191 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1191 IPR023603 Threonine aldolase CH55_1192 IPR016040 NAD(P)-binding domain CH55_1192 IPR021295 Protein of unknown function DUF2867 CH55_1192 IPR036291 CH55_1192 CH55_1193 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_1193 IPR036291 CH55_1193 CH55_1194 IPR024289 Domain of unknown function DUF3828 CH55_1195 IPR002701 Chorismate mutase CH55_1195 IPR008240 Chorismate mutase, periplasmic CH55_1195 IPR036263 CH55_1195 CH55_1196 IPR003439 ABC transporter-like CH55_1196 IPR003593 AAA+ ATPase domain CH55_1196 IPR017871 ABC transporter, conserved site CH55_1196 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1196 IPR030679 CH55_1196 CH55_1197 IPR001320 Ionotropic glutamate receptor CH55_1197 IPR001638 Extracellular solute-binding protein, family 3 CH55_1197 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein CH55_1197 IPR018313 Extracellular solute-binding protein, family 3, conserved site CH55_1198 IPR000515 MetI-like domain CH55_1198 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_1198 IPR035906 CH55_1198 CH55_1199 IPR000515 MetI-like domain CH55_1199 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_1199 IPR035906 CH55_1199 CH55_12 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase CH55_12 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CH55_120 IPR008619 Filamentous haemagglutinin repeat CH55_120 IPR008638 Filamentous haemagglutinin, N-terminal CH55_120 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH55_120 IPR011050 Pectin lyase fold/virulence factor CH55_120 IPR012334 Pectin lyase fold CH55_120 IPR024973 ESPR domain CH55_1200 IPR000620 Drug/metabolite transporter CH55_1201 IPR016935 Protein of unknown function DUF2338 CH55_1201 IPR036291 CH55_1201 CH55_1202 IPR004298 Nicotianamine synthase CH55_1202 IPR036291 CH55_1202 CH55_1203 IPR003439 ABC transporter-like CH55_1203 IPR003593 AAA+ ATPase domain CH55_1203 IPR017871 ABC transporter, conserved site CH55_1203 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1204 IPR000522 ABC transporter, permease protein CH55_1204 IPR037294 CH55_1204 CH55_1206 IPR002491 ABC transporter periplasmic binding domain CH55_1207 IPR001107 Band 7 protein CH55_1207 IPR036013 CH55_1207 CH55_1209 IPR001320 Ionotropic glutamate receptor CH55_1209 IPR001638 Extracellular solute-binding protein, family 3 CH55_1209 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein CH55_1209 IPR018313 Extracellular solute-binding protein, family 3, conserved site CH55_121 IPR006914 VENN motif-containing domain CH55_121 IPR025157 Haemagluttinin repeat CH55_1210 IPR010280 (Uracil-5)-methyltransferase family CH55_1210 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC CH55_1210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1210 IPR030390 CH55_1210 CH55_1210 IPR030391 CH55_1210 CH55_1211 IPR019703 Protein of unknown function DUF2593 CH55_1212 IPR000515 MetI-like domain CH55_1212 IPR035906 CH55_1212 CH55_1213 IPR000515 MetI-like domain CH55_1213 IPR035906 CH55_1213 CH55_1214 IPR003439 ABC transporter-like CH55_1214 IPR003593 AAA+ ATPase domain CH55_1214 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CH55_1214 IPR008995 Molybdate/tungstate binding, C-terminal CH55_1214 IPR013611 Transport-associated OB, type 2 CH55_1214 IPR017871 ABC transporter, conserved site CH55_1214 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1215 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CH55_1215 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_1216 IPR019660 Putative sensory transduction regulator YbjN CH55_1217 IPR010815 Protein of unknown function DUF1418 CH55_1218 IPR002109 Glutaredoxin CH55_1218 IPR011767 Glutaredoxin active site CH55_1218 IPR011902 Glutaredoxin, GrxA CH55_1218 IPR014025 Glutaredoxin subgroup CH55_1218 IPR036249 CH55_1218 CH55_1219 IPR006037 Regulator of K+ conductance, C-terminal CH55_1219 IPR006512 YidE/YbjL duplication CH55_1219 IPR023017 Transport protein YbjL, putative CH55_1219 IPR036721 CH55_1219 CH55_122 IPR016630 Uncharacterised conserved protein UCP015278 CH55_1220 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH55_1220 IPR036938 CH55_1220 CH55_1221 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH55_1221 IPR036938 CH55_1221 CH55_1222 IPR002915 DeoC/FbaB/ lacD aldolase CH55_1222 IPR011343 Deoxyribose-phosphate aldolase CH55_1222 IPR013785 Aldolase-type TIM barrel CH55_1222 IPR028581 Deoxyribose-phosphate aldolase type I CH55_1223 IPR001034 HTH DeoR N-terminal domain CH55_1223 IPR014036 DeoR C-terminal sensor domain CH55_1223 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH55_1223 IPR037171 CH55_1223 CH55_1224 IPR018227 Tryptophan/tyrosine permease CH55_1226 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CH55_1226 IPR012338 Beta-lactamase/transpeptidase-like CH55_1226 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CH55_1226 IPR015956 Penicillin-binding protein-associated CH55_1226 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CH55_1226 IPR037167 CH55_1226 CH55_1227 IPR000515 MetI-like domain CH55_1227 IPR035906 CH55_1227 CH55_1228 IPR003439 ABC transporter-like CH55_1228 IPR003593 AAA+ ATPase domain CH55_1228 IPR017871 ABC transporter, conserved site CH55_1228 IPR018449 NIL domain CH55_1228 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1229 IPR004872 Lipoprotein NlpA family CH55_1230 IPR005123 Oxoglutarate/iron-dependent dioxygenase CH55_1230 IPR026992 Non-haem dioxygenase N-terminal domain CH55_1230 IPR027443 Isopenicillin N synthase-like CH55_1231 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CH55_1231 IPR023214 HAD-like domain CH55_1231 IPR036412 CH55_1231 CH55_1232 IPR004045 Glutathione S-transferase, N-terminal CH55_1232 IPR004046 Glutathione S-transferase, C-terminal CH55_1232 IPR036249 CH55_1232 CH55_1232 IPR036282 CH55_1232 CH55_1233 IPR000531 TonB-dependent receptor, beta-barrel CH55_1233 IPR010916 TonB box, conserved site CH55_1233 IPR012910 TonB-dependent receptor, plug CH55_1233 IPR036942 CH55_1233 CH55_1233 IPR037066 CH55_1233 CH55_1234 IPR003439 ABC transporter-like CH55_1234 IPR003593 AAA+ ATPase domain CH55_1234 IPR017871 ABC transporter, conserved site CH55_1234 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1235 IPR000522 ABC transporter, permease protein CH55_1235 IPR037294 CH55_1235 CH55_1236 IPR002491 ABC transporter periplasmic binding domain CH55_1237 IPR002293 Amino acid/polyamine transporter I CH55_1237 IPR004841 Amino acid permease/ SLC12A domain CH55_1238 IPR004841 Amino acid permease/ SLC12A domain CH55_124 IPR006914 VENN motif-containing domain CH55_1240 IPR000847 Transcription regulator HTH, LysR CH55_1240 IPR005119 LysR, substrate-binding CH55_1240 IPR036388 CH55_1240 CH55_1240 IPR036390 CH55_1240 CH55_1241 IPR004630 Uncharacterised protein family UPF0324, bacteria CH55_1241 IPR018383 Uncharacterised protein family UPF0324, prokaryote CH55_1242 IPR001719 AP endonuclease 2 CH55_1242 IPR013022 Xylose isomerase-like, TIM barrel domain CH55_1242 IPR018246 AP endonuclease 2, zinc binding site CH55_1242 IPR036237 CH55_1242 CH55_1243 IPR000015 Outer membrane usher protein CH55_1243 IPR018030 Fimbrial membrane usher, conserved site CH55_1243 IPR025885 PapC, N-terminal domain CH55_1243 IPR025949 PapC-like, C-terminal domain CH55_1243 IPR037224 CH55_1243 CH55_1244 IPR001829 Pili assembly chaperone, bacterial CH55_1244 IPR008962 PapD-like CH55_1244 IPR013783 Immunoglobulin-like fold CH55_1244 IPR016147 PapD, N-terminal, bacterial CH55_1244 IPR016148 Pili assembly chaperone, C-terminal domain CH55_1244 IPR018046 Pili assembly chaperone, conserved site CH55_1244 IPR036316 CH55_1244 CH55_1246 IPR035182 CH55_1246 CH55_1247 IPR001867 Signal transduction response regulator, C-terminal CH55_1247 IPR016032 Signal transduction response regulator, C-terminal effector CH55_1247 IPR036388 CH55_1247 CH55_1248 IPR003352 Phosphotransferase system, EIIC CH55_1248 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CH55_1248 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH55_1248 IPR006327 Phosphotransferase system, fructose IIC component CH55_1248 IPR036095 CH55_1248 CH55_1249 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH55_1249 IPR011611 Carbohydrate kinase PfkB CH55_1249 IPR017583 Tagatose/fructose phosphokinase CH55_1249 IPR022463 Fructose 1-phosphate kinase CH55_1249 IPR029056 Ribokinase-like CH55_1250 IPR000032 Phosphocarrier HPr protein-like CH55_1250 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH55_1250 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH55_1250 IPR002178 PTS EIIA type-2 domain CH55_1250 IPR016152 Phosphotransferase/anion transporter CH55_1250 IPR035895 CH55_1250 CH55_1251 IPR000086 NUDIX hydrolase domain CH55_1251 IPR015797 NUDIX hydrolase domain-like CH55_1251 IPR020084 NUDIX hydrolase, conserved site CH55_1251 IPR020476 NUDIX hydrolase CH55_1252 IPR001851 ABC transporter, permease CH55_1253 IPR003439 ABC transporter-like CH55_1253 IPR003593 AAA+ ATPase domain CH55_1253 IPR017871 ABC transporter, conserved site CH55_1253 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1254 IPR025997 Periplasmic binding protein domain CH55_1254 IPR028082 Periplasmic binding protein-like I CH55_1255 IPR004788 Ribose 5-phosphate isomerase, type A CH55_1255 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CH55_1255 IPR037171 CH55_1255 CH55_1256 IPR000577 CH55_1256 CH55_1256 IPR006000 Xylulokinase CH55_1256 IPR018483 Carbohydrate kinase, FGGY, conserved site CH55_1256 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_1256 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_1257 IPR015590 Aldehyde dehydrogenase domain CH55_1257 IPR016160 Aldehyde dehydrogenase, cysteine active site CH55_1257 IPR016161 Aldehyde/histidinol dehydrogenase CH55_1257 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_1257 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_1258 IPR011234 Fumarylacetoacetase, C-terminal-related CH55_1258 IPR036663 CH55_1258 CH55_1259 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH55_1259 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH55_1259 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH55_1259 IPR036291 CH55_1259 CH55_126 IPR025459 Protein of unknown function DUF4279 CH55_1260 IPR002347 Glucose/ribitol dehydrogenase CH55_1260 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_1260 IPR036291 CH55_1260 CH55_1261 IPR005358 Putative zinc- or iron-chelating domain containing protein CH55_1262 IPR002293 Amino acid/polyamine transporter I CH55_1262 IPR013059 Tryptophan/tyrosine transporter CH55_1262 IPR018227 Tryptophan/tyrosine permease CH55_1263 IPR001059 Translation elongation factor P/YeiP, central CH55_1263 IPR008991 Translation protein SH3-like domain CH55_1263 IPR011897 Translation elongation factor P-like, YeiP CH55_1263 IPR012340 Nucleic acid-binding, OB-fold CH55_1263 IPR013185 Translation elongation factor, KOW-like CH55_1263 IPR013852 Translation elongation factor P/YeiP, conserved site CH55_1263 IPR014722 Ribosomal protein L2 domain 2 CH55_1263 IPR015365 Elongation factor P, C-terminal CH55_1263 IPR020599 Translation elongation factor P/YeiP CH55_1264 IPR004628 Mannonate dehydratase CH55_1264 IPR036237 CH55_1264 CH55_1265 IPR000669 Mannitol dehydrogenase CH55_1265 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_1265 IPR013118 Mannitol dehydrogenase, C-terminal CH55_1265 IPR013131 Mannitol dehydrogenase, N-terminal CH55_1265 IPR013328 Dehydrogenase, multihelical CH55_1265 IPR023027 Mannitol dehydrogenase, conserved site CH55_1265 IPR036291 CH55_1265 CH55_1266 IPR000524 Transcription regulator HTH, GntR CH55_1266 IPR008920 Transcription regulator FadR/GntR, C-terminal CH55_1266 IPR011711 GntR, C-terminal CH55_1266 IPR036388 CH55_1266 CH55_1266 IPR036390 CH55_1266 CH55_1268 IPR003495 CobW/HypB/UreG domain CH55_1268 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CH55_1268 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1269 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH55_1269 IPR032908 CH55_1269 CH55_1269 IPR036938 CH55_1269 CH55_1270 IPR000064 Endopeptidase, NLPC/P60 domain CH55_1270 IPR038765 CH55_1270 CH55_1272 IPR001633 EAL domain CH55_1272 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CH55_1272 IPR035919 CH55_1272 CH55_1273 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_1273 IPR030678 CH55_1273 CH55_1274 IPR000515 MetI-like domain CH55_1274 IPR035906 CH55_1274 CH55_1275 IPR000515 MetI-like domain CH55_1275 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH55_1275 IPR035906 CH55_1275 CH55_1276 IPR003439 ABC transporter-like CH55_1276 IPR003593 AAA+ ATPase domain CH55_1276 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH55_1276 IPR017871 ABC transporter, conserved site CH55_1276 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1277 IPR020489 Uncharacterised protein family YejG CH55_1278 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CH55_1278 IPR011701 Major facilitator superfamily CH55_1278 IPR036259 CH55_1278 CH55_1279 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CH55_1279 IPR002942 RNA-binding S4 domain CH55_1279 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CH55_1279 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CH55_1279 IPR020103 Pseudouridine synthase, catalytic domain CH55_1279 IPR036986 CH55_1279 CH55_1280 IPR001650 Helicase, C-terminal CH55_1280 IPR006935 Helicase/UvrB domain CH55_1280 IPR011332 Zinc-binding ribosomal protein CH55_1280 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_1280 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1281 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CH55_1281 IPR020055 Ribosomal protein L25, short-form CH55_1281 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CH55_1281 IPR029751 Ribosomal protein L25 CH55_1282 IPR002686 Transposase IS200-like CH55_1282 IPR036515 CH55_1282 CH55_1283 IPR002686 Transposase IS200-like CH55_1283 IPR036515 CH55_1283 CH55_1284 IPR007358 Nucleoid-associated protein NdpA CH55_1285 IPR009857 Uncharacterised protein family UPF0352 CH55_1285 IPR023202 YejL-like domain CH55_1286 IPR000917 Sulfatase CH55_1286 IPR012159 Membrane sulfatase, HI0842-related CH55_1286 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_1286 IPR017850 Alkaline-phosphatase-like, core domain CH55_1286 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain CH55_1289 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type CH55_129 IPR003439 ABC transporter-like CH55_129 IPR003593 AAA+ ATPase domain CH55_129 IPR008995 Molybdate/tungstate binding, C-terminal CH55_129 IPR013611 Transport-associated OB, type 2 CH55_129 IPR017871 ABC transporter, conserved site CH55_129 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1293 IPR001360 Glycoside hydrolase, family 1 CH55_1293 IPR017853 Glycoside hydrolase, superfamily CH55_1293 IPR018120 Glycoside hydrolase, family 1, active site CH55_1293 IPR033132 CH55_1293 CH55_1295 IPR000281 Helix-turn-helix protein RpiR CH55_1295 IPR001347 Sugar isomerase (SIS) CH55_1295 IPR009057 Homeodomain-like CH55_1295 IPR036388 CH55_1295 CH55_1296 IPR011083 Phage tail collar domain CH55_1296 IPR037053 CH55_1296 CH55_1297 IPR018755 Bacteriophage Mu, Gp48 CH55_1298 IPR018755 Bacteriophage Mu, Gp48 CH55_1299 IPR006949 Baseplate assembly protein J-like, predicted CH55_13 IPR002781 Transmembrane protein TauE like CH55_130 IPR005841 Alpha-D-phosphohexomutase superfamily CH55_130 IPR005843 Alpha-D-phosphohexomutase, C-terminal CH55_130 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CH55_130 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CH55_130 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CH55_130 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CH55_130 IPR016066 Alpha-D-phosphohexomutase, conserved site CH55_130 IPR036900 CH55_130 CH55_1300 IPR010877 Bacteriophage Mu, Gp46 CH55_1301 IPR014462 Bacteriophage Mu, Gp45 CH55_1302 IPR023399 Baseplate-like protein, two-layer sandwich domain CH55_1302 IPR026276 Baseplate protein GpP CH55_1303 IPR009826 DNA circulation, N-terminal CH55_1305 IPR019289 Bacteriophage tail protein Gp41, putative CH55_1306 IPR019596 Bacteriophage Mu, GpM, tail tube CH55_1307 IPR007067 Tail sheath protein CH55_1307 IPR020287 Tail sheath protein, C-terminal domain CH55_1307 IPR035089 CH55_1307 CH55_1308 IPR024400 Protein of unknown function DUF2635 CH55_131 IPR000843 Transcription regulator HTH, LacI CH55_131 IPR010982 Lambda repressor-like, DNA-binding domain CH55_131 IPR028082 Periplasmic binding protein-like I CH55_1311 IPR013022 Xylose isomerase-like, TIM barrel domain CH55_1311 IPR026040 Hydroxypyruvate isomerase-like CH55_1311 IPR036237 CH55_1311 CH55_1312 IPR001034 HTH DeoR N-terminal domain CH55_1312 IPR014036 DeoR C-terminal sensor domain CH55_1312 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH55_1312 IPR036388 CH55_1312 CH55_1312 IPR036390 CH55_1312 CH55_1312 IPR037171 CH55_1312 CH55_1313 IPR001303 Class II aldolase/adducin N-terminal CH55_1313 IPR036409 CH55_1313 CH55_1314 IPR010737 Protein of unknown function, DUF1537 CH55_1314 IPR031475 CH55_1314 CH55_1314 IPR037051 CH55_1314 CH55_1315 IPR010534 Bacteriophage 933W, GpQ CH55_1316 IPR001387 Cro/C1-type helix-turn-helix domain CH55_1316 IPR010982 Lambda repressor-like, DNA-binding domain CH55_1316 IPR015927 Peptidase S24/S26A/S26B/S26C CH55_1316 IPR036286 CH55_1316 CH55_1317 IPR010391 DNA damage-inducible protein DinI-like CH55_1317 IPR036687 CH55_1317 CH55_1318 IPR000036 Peptidase A26, omptin CH55_1318 IPR020080 Outer membrane adhesin/peptidase omptin CH55_1319 IPR003660 HAMP linker domain CH55_1319 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_1319 IPR029151 Periplasmic sensor domain-like CH55_1319 IPR033479 CH55_1319 CH55_132 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_1320 IPR001279 Beta-lactamase-like CH55_1320 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CH55_1320 IPR036866 CH55_1320 CH55_1321 IPR036259 CH55_1321 CH55_1322 IPR001466 Beta-lactamase-related CH55_1322 IPR012338 Beta-lactamase/transpeptidase-like CH55_1325 IPR002686 Transposase IS200-like CH55_1325 IPR036515 CH55_1325 CH55_1326 IPR001702 Porin, Gram-negative type CH55_1326 IPR001897 Porin, gammaproteobacterial CH55_1326 IPR013793 Porin, Gram-negative type, conserved site CH55_1326 IPR023614 Porin domain CH55_1328 IPR011701 Major facilitator superfamily CH55_1328 IPR036259 CH55_1328 CH55_1329 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_1329 IPR036890 CH55_1329 CH55_133 IPR000515 MetI-like domain CH55_133 IPR035906 CH55_133 CH55_1330 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH55_1330 IPR032306 CH55_1330 CH55_1330 IPR036641 CH55_1330 CH55_1330 IPR038616 CH55_1330 CH55_1331 IPR000792 Transcription regulator LuxR, C-terminal CH55_1331 IPR001789 Signal transduction response regulator, receiver domain CH55_1331 IPR011006 CheY-like superfamily CH55_1331 IPR016032 Signal transduction response regulator, C-terminal effector CH55_1331 IPR030864 CH55_1331 CH55_1331 IPR036388 CH55_1331 CH55_1332 IPR001789 Signal transduction response regulator, receiver domain CH55_1332 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_1332 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_1332 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_1332 IPR011006 CheY-like superfamily CH55_1332 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CH55_1332 IPR030856 CH55_1332 CH55_1332 IPR036097 CH55_1332 CH55_1332 IPR036890 CH55_1332 CH55_1332 IPR038388 CH55_1332 CH55_1333 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CH55_1333 IPR005743 DNA gyrase, subunit A CH55_1333 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CH55_1333 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CH55_1333 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CH55_1333 IPR013760 DNA topoisomerase, type IIA-like domain CH55_1333 IPR035516 CH55_1333 CH55_1334 IPR010233 Ubiquinone biosynthesis O-methyltransferase CH55_1334 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1335 IPR000788 Ribonucleotide reductase large subunit, C-terminal CH55_1335 IPR005144 ATP-cone CH55_1335 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CH55_1335 IPR013346 Ribonucleotide reductase, class I , alpha subunit CH55_1335 IPR013509 Ribonucleotide reductase large subunit, N-terminal CH55_1336 IPR000358 Ribonucleotide reductase small subunit CH55_1336 IPR009078 Ferritin-like superfamily CH55_1336 IPR012348 Ribonucleotide reductase-related CH55_1336 IPR030475 CH55_1336 CH55_1337 IPR001041 2Fe-2S ferredoxin-type domain CH55_1337 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH55_1337 IPR012675 Beta-grasp domain CH55_1337 IPR036010 CH55_1337 CH55_1338 IPR005658 Proteinase inhibitor I11, ecotin CH55_1338 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria CH55_1338 IPR036198 CH55_1338 CH55_1339 IPR001453 Molybdopterin binding domain CH55_1339 IPR008135 Competence-induced protein CinA CH55_1339 IPR036425 CH55_1339 CH55_134 IPR000515 MetI-like domain CH55_134 IPR035906 CH55_134 CH55_1340 IPR013059 Tryptophan/tyrosine transporter CH55_1340 IPR013061 Tryptophan/tryrosine permease, conserved site CH55_1340 IPR018227 Tryptophan/tyrosine permease CH55_1341 IPR009998 YfaZ CH55_1341 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_1342 IPR010582 Catalase immune-responsive domain CH55_1342 IPR011614 Catalase core domain CH55_1342 IPR018028 Catalase, mono-functional, haem-containing CH55_1342 IPR020835 Catalase-like domain CH55_1342 IPR024708 Catalase active site CH55_1342 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CH55_1342 IPR037060 CH55_1342 CH55_1343 IPR006554 Helicase-like, DEXD box c2 type CH55_1343 IPR006555 ATP-dependent helicase, C-terminal CH55_1343 IPR010614 DEAD2 CH55_1343 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_1343 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1343 IPR039000 CH55_1343 CH55_1344 IPR001702 Porin, Gram-negative type CH55_1344 IPR001897 Porin, gammaproteobacterial CH55_1344 IPR013793 Porin, Gram-negative type, conserved site CH55_1344 IPR023614 Porin domain CH55_1345 IPR000620 Drug/metabolite transporter CH55_1347 IPR000310 Orn/Lys/Arg decarboxylase, major domain CH55_1347 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CH55_1347 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CH55_1347 IPR011193 Ornithine/lysine/arginine decarboxylase CH55_1347 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1347 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1347 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1347 IPR036633 CH55_1347 CH55_1348 IPR002293 Amino acid/polyamine transporter I CH55_1349 IPR000515 MetI-like domain CH55_1349 IPR035906 CH55_1349 CH55_135 IPR007184 Mannoside phosphorylase CH55_135 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CH55_1350 IPR003439 ABC transporter-like CH55_1350 IPR003593 AAA+ ATPase domain CH55_1350 IPR017871 ABC transporter, conserved site CH55_1350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1351 IPR000515 MetI-like domain CH55_1351 IPR035906 CH55_1351 CH55_1352 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CH55_1353 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CH55_1354 IPR001307 Thiosulphate sulfurtransferase, conserved site CH55_1354 IPR001763 Rhodanese-like domain CH55_1354 IPR036873 CH55_1354 CH55_1355 IPR002129 Pyridoxal phosphate-dependent decarboxylase CH55_1355 IPR010977 Aromatic-L-amino-acid decarboxylase CH55_1355 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1355 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1355 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1356 IPR005123 Oxoglutarate/iron-dependent dioxygenase CH55_1356 IPR016946 Uncharacterised conserved protein UCP030125 CH55_1357 IPR003439 ABC transporter-like CH55_1357 IPR003593 AAA+ ATPase domain CH55_1357 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CH55_1357 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1358 IPR001851 ABC transporter, permease CH55_1358 IPR003439 ABC transporter-like CH55_1358 IPR017778 ABC transporter, urea, permease protein, UrtC CH55_1358 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CH55_1358 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1358 IPR032823 CH55_1358 CH55_1359 IPR001851 ABC transporter, permease CH55_1359 IPR011989 Armadillo-like helical CH55_1359 IPR016024 Armadillo-type fold CH55_1359 IPR017779 ABC transporter, urea, permease protein, UrtB CH55_136 IPR015045 Protein of unknown function DUF1861 CH55_136 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CH55_1360 IPR000709 Leu/Ile/Val-binding protein CH55_1360 IPR017777 ABC transporter, urea, substrate-binding, UrtA CH55_1360 IPR028082 Periplasmic binding protein-like I CH55_1361 IPR009921 Domain of unknown function DUF1456 CH55_1362 IPR000515 MetI-like domain CH55_1362 IPR005769 ABC transporter, permease PhnE/PtxC CH55_1362 IPR035906 CH55_1362 CH55_1364 IPR000515 MetI-like domain CH55_1364 IPR005769 ABC transporter, permease PhnE/PtxC CH55_1364 IPR035906 CH55_1364 CH55_1365 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein CH55_1365 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein CH55_1366 IPR003439 ABC transporter-like CH55_1366 IPR003593 AAA+ ATPase domain CH55_1366 IPR012693 ABC transporter, phosphonate import, PhnC CH55_1366 IPR017871 ABC transporter, conserved site CH55_1366 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1367 IPR007341 Transglycosylase-associated protein CH55_1368 IPR020941 Suppressor of fused-like domain CH55_1369 IPR002711 HNH endonuclease CH55_1369 IPR003615 HNH nuclease CH55_137 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_1370 IPR008173 Adenylyl cyclase CyaB CH55_1370 IPR023577 CYTH-like domain CH55_1370 IPR033469 CH55_1370 CH55_1371 IPR006094 FAD linked oxidase, N-terminal CH55_1371 IPR012256 D-lactate dehydrogenase CH55_1371 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal CH55_1371 IPR016164 FAD-linked oxidase-like, C-terminal CH55_1371 IPR016167 FAD-binding, type 2, subdomain 1 CH55_1371 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_1371 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 CH55_1371 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 CH55_1371 IPR036318 CH55_1371 CH55_1372 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CH55_1372 IPR012338 Beta-lactamase/transpeptidase-like CH55_1372 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CH55_1374 IPR001269 tRNA-dihydrouridine synthase CH55_1374 IPR013785 Aldolase-type TIM barrel CH55_1374 IPR018517 tRNA-dihydrouridine synthase, conserved site CH55_1374 IPR032886 CH55_1374 CH55_1376 IPR002686 Transposase IS200-like CH55_1376 IPR036515 CH55_1376 CH55_1377 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CH55_1377 IPR001650 Helicase, C-terminal CH55_1377 IPR011545 DEAD/DEAH box helicase domain CH55_1377 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1378 IPR001207 Transposase, mutator type CH55_1380 IPR010665 Protein of unknown function DUF1240 CH55_1381 IPR010665 Protein of unknown function DUF1240 CH55_1382 IPR010665 Protein of unknown function DUF1240 CH55_1384 IPR008514 Type VI secretion system effector, Hcp CH55_1384 IPR036624 CH55_1384 CH55_1385 IPR002686 Transposase IS200-like CH55_1385 IPR036515 CH55_1385 CH55_1386 IPR001674 GMP synthase, C-terminal CH55_1386 IPR004739 GMP synthase, N-terminal CH55_1386 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1386 IPR017926 Glutamine amidotransferase CH55_1386 IPR022310 NAD/GMP synthase CH55_1386 IPR022955 GMP synthase CH55_1386 IPR029062 Class I glutamine amidotransferase-like CH55_1387 IPR000644 CBS domain CH55_1387 IPR001093 IMP dehydrogenase/GMP reductase CH55_1387 IPR005990 Inosine-5'-monophosphate dehydrogenase CH55_1387 IPR013785 Aldolase-type TIM barrel CH55_1387 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CH55_1388 IPR003753 Exonuclease VII, large subunit CH55_1388 IPR020579 Exonuclease VII, large subunit, C-terminal CH55_1388 IPR025824 OB-fold nucleic acid binding domain CH55_1389 IPR010807 Protein of unknown function DUF1407 CH55_1389 IPR029037 YfgJ-like CH55_139 IPR006685 Mechanosensitive ion channel MscS CH55_139 IPR010920 Like-Sm (LSM) domain CH55_139 IPR023408 CH55_139 CH55_1390 IPR004776 Auxin efflux carrier CH55_1390 IPR038770 CH55_1390 CH55_1391 IPR005225 Small GTP-binding protein domain CH55_1391 IPR006073 GTP binding domain CH55_1391 IPR015946 K homology domain-like, alpha/beta CH55_1391 IPR016484 GTP-binding protein EngA CH55_1391 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1391 IPR032859 CH55_1391 CH55_1392 IPR002372 Pyrrolo-quinoline quinone repeat CH55_1392 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CH55_1392 IPR015943 WD40/YVTN repeat-like-containing domain CH55_1392 IPR017687 Outer membrane protein assembly factor BamB CH55_1392 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CH55_1393 IPR011990 Tetratricopeptide-like helical domain CH55_1393 IPR018704 Domain of unknown function DUF09976 CH55_1393 IPR026039 Uncharacterised protein family UPF0070 CH55_1394 IPR004154 Anticodon-binding CH55_1394 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CH55_1394 IPR015807 Histidine-tRNA ligase CH55_1394 IPR036621 CH55_1394 CH55_1395 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CH55_1395 IPR011005 Dihydropteroate synthase-like CH55_1395 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CH55_1395 IPR036849 CH55_1395 CH55_1396 IPR001387 Cro/C1-type helix-turn-helix domain CH55_1396 IPR010982 Lambda repressor-like, DNA-binding domain CH55_1396 IPR023690 Cytoskeleton protein RodZ CH55_1396 IPR025194 Domain of unknown function DUF4115 CH55_1397 IPR011990 Tetratricopeptide-like helical domain CH55_1397 IPR013360 Pilus biogenesis/stability type IV, PilW CH55_1397 IPR019734 Tetratricopeptide repeat CH55_1398 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CH55_1398 IPR007197 Radical SAM CH55_1398 IPR013785 Aldolase-type TIM barrel CH55_1398 IPR027492 Dual-specificity RNA methyltransferase RlmN CH55_1399 IPR001564 Nucleoside diphosphate kinase CH55_1399 IPR023005 Nucleoside diphosphate kinase, active site CH55_1399 IPR034907 CH55_1399 CH55_1399 IPR036850 CH55_1399 CH55_14 IPR007411 Protein of unknown function DUF462 CH55_140 IPR002729 CRISPR-associated protein Cas1 CH55_140 IPR019857 CRISPR-associated protein Cas1, YPEST subtype CH55_1400 IPR001064 Beta/gamma crystallin CH55_1400 IPR011024 Gamma-crystallin-related CH55_1400 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal CH55_1400 IPR015185 Exotoxin A, binding CH55_1402 IPR004899 Pertactin, central region CH55_1402 IPR005546 Autotransporter beta-domain CH55_1402 IPR006315 Outer membrane autotransporter barrel CH55_1402 IPR011050 Pectin lyase fold/virulence factor CH55_1402 IPR012332 P22 tailspike C-terminal domain-like CH55_1402 IPR030930 CH55_1402 CH55_1402 IPR036709 CH55_1402 CH55_1403 IPR004899 Pertactin, central region CH55_1403 IPR005546 Autotransporter beta-domain CH55_1403 IPR006315 Outer membrane autotransporter barrel CH55_1403 IPR011050 Pectin lyase fold/virulence factor CH55_1403 IPR012332 P22 tailspike C-terminal domain-like CH55_1403 IPR036709 CH55_1403 CH55_1404 IPR003991 Pertactin virulence factor family CH55_1404 IPR005546 Autotransporter beta-domain CH55_1404 IPR006315 Outer membrane autotransporter barrel CH55_1404 IPR036709 CH55_1404 CH55_1405 IPR009839 SseB protein N-terminal domain CH55_1405 IPR027945 SseB protein, C-terminal CH55_1406 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CH55_1406 IPR008330 Peptidase M17, peptidase B CH55_1406 IPR011356 Leucine aminopeptidase/peptidase B CH55_1407 IPR007479 ISC system FeS cluster assembly, IscX CH55_1407 IPR036762 CH55_1407 CH55_1408 IPR001041 2Fe-2S ferredoxin-type domain CH55_1408 IPR001055 Adrenodoxin CH55_1408 IPR011536 Ferredoxin, 2Fe-2S type CH55_1408 IPR012675 Beta-grasp domain CH55_1408 IPR018298 Adrenodoxin, iron-sulphur binding site CH55_1408 IPR036010 CH55_1408 CH55_1409 IPR010236 ISC system FeS cluster assembly, HscA chaperone CH55_1409 IPR013126 Heat shock protein 70 family CH55_1409 IPR018181 Heat shock protein 70, conserved site CH55_1409 IPR029047 Heat shock protein 70kD, peptide-binding domain CH55_1409 IPR029048 Heat shock protein 70kD, C-terminal domain CH55_141 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type CH55_141 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_141 IPR038257 CH55_141 CH55_1410 IPR001623 DnaJ domain CH55_1410 IPR004640 Co-chaperone Hsc20 CH55_1410 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CH55_1410 IPR036386 CH55_1410 CH55_1410 IPR036869 CH55_1410 CH55_1411 IPR000361 FeS cluster biogenesis CH55_1411 IPR011302 ISC system FeS cluster assembly, IscA scaffold CH55_1411 IPR016092 FeS cluster insertion protein CH55_1411 IPR017870 FeS cluster insertion, C-terminal, conserved site CH55_1411 IPR035903 CH55_1411 CH55_1412 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CH55_1412 IPR011339 ISC system FeS cluster assembly, IscU scaffold CH55_1413 IPR000192 Aminotransferase class V domain CH55_1413 IPR010240 Cysteine desulfurase CH55_1413 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1413 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1413 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1413 IPR016454 Cysteine desulfurase, NifS CH55_1413 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CH55_1414 IPR000944 Transcription regulator Rrf2-like CH55_1414 IPR010242 Transcription factor HTH, IscR CH55_1414 IPR030489 CH55_1414 CH55_1414 IPR036388 CH55_1414 CH55_1414 IPR036390 CH55_1414 CH55_1415 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH55_1415 IPR004384 RNA methyltransferase TrmH, group 1 CH55_1415 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_1415 IPR029028 Alpha/beta knot methyltransferases CH55_1416 IPR000760 Inositol monophosphatase CH55_1416 IPR020550 Inositol monophosphatase, conserved site CH55_1416 IPR020583 Inositol monophosphatase, metal-binding site CH55_1416 IPR022337 Inositol monophosphatase, SuhB CH55_1417 IPR002686 Transposase IS200-like CH55_1417 IPR036515 CH55_1417 CH55_1418 IPR011541 Nickel/cobalt transporter, high-affinity CH55_1419 IPR010412 Protein of unknown function DUF1007 CH55_1419 IPR016537 Uncharacterised conserved protein UCP008159, CH55_142 IPR013397 CRISPR-associated protein Csy1 CH55_1420 IPR024989 Major facilitator superfamily associated domain CH55_1420 IPR026032 Phenylproprionate/maltose permease CH55_1420 IPR036259 CH55_1420 CH55_1421 IPR011608 PRD domain CH55_1421 IPR036634 CH55_1421 CH55_1422 IPR000758 Virulence-related outer membrane protein CH55_1422 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_1422 IPR027385 Outer membrane protein beta-barrel CH55_1423 IPR001085 Serine hydroxymethyltransferase CH55_1423 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1423 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1423 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1423 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CH55_1423 IPR039429 CH55_1423 CH55_1424 IPR000971 Globin CH55_1424 IPR001221 Phenol hydroxylase reductase CH55_1424 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_1424 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CH55_1424 IPR008333 Oxidoreductase, FAD-binding domain CH55_1424 IPR009050 Globin-like CH55_1424 IPR012292 Globin, structural domain CH55_1424 IPR017938 Riboflavin synthase-like beta-barrel CH55_1424 IPR023950 Flavohemoprotein CH55_1424 IPR039261 CH55_1424 CH55_1425 IPR032791 CH55_1425 CH55_1425 IPR036388 CH55_1425 CH55_1425 IPR036390 CH55_1425 CH55_1426 IPR032791 CH55_1426 CH55_1427 IPR002187 Nitrogen regulatory protein PII CH55_1427 IPR002332 Nitrogen regulatory protein P-II, urydylation site CH55_1427 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH55_1427 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH55_1427 IPR017918 Nitrogen regulatory protein PII, conserved site CH55_1428 IPR000132 Nitrilase/cyanide hydratase, conserved site CH55_1428 IPR003010 Carbon-nitrogen hydrolase CH55_1428 IPR003694 NAD(+) synthetase CH55_1428 IPR014445 Glutamine-dependent NAD(+) synthetase CH55_1428 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1428 IPR022310 NAD/GMP synthase CH55_1428 IPR036526 CH55_1428 CH55_1429 IPR001789 Signal transduction response regulator, receiver domain CH55_1429 IPR002078 RNA polymerase sigma factor 54 interaction domain CH55_1429 IPR003593 AAA+ ATPase domain CH55_1429 IPR009057 Homeodomain-like CH55_1429 IPR011006 CheY-like superfamily CH55_1429 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH55_1429 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH55_1429 IPR025944 Sigma-54 interaction domain, conserved site CH55_1429 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_143 IPR013398 CRISPR-associated protein Csy2 CH55_1430 IPR025262 Quorum-sensing regulator protein G CH55_1431 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_1431 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_1431 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_1431 IPR036097 CH55_1431 CH55_1431 IPR036890 CH55_1431 CH55_1432 IPR002686 Transposase IS200-like CH55_1432 IPR036515 CH55_1432 CH55_1436 IPR010073 Phosphoribosylformylglycinamidine synthase CH55_1436 IPR010918 AIR synthase-related protein, C-terminal domain CH55_1436 IPR029062 Class I glutamine amidotransferase-like CH55_1436 IPR036604 CH55_1436 CH55_1436 IPR036676 CH55_1436 CH55_1436 IPR036921 CH55_1436 CH55_1437 IPR000189 Prokaryotic transglycosylase, active site CH55_1437 IPR001638 Extracellular solute-binding protein, family 3 CH55_1437 IPR008258 Lytic transglycosylase-like SLT domain CH55_1437 IPR023346 Lysozyme-like domain CH55_1437 IPR023703 Membrane-bound lytic murein transglycosylase F CH55_1438 IPR016192 APOBEC/CMP deaminase, zinc-binding CH55_1438 IPR016193 Cytidine deaminase-like CH55_1438 IPR028883 tRNA-specific adenosine deaminase CH55_1439 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB CH55_1439 IPR023214 HAD-like domain CH55_1439 IPR036412 CH55_1439 CH55_144 IPR013399 CRISPR-associated protein Csy3 CH55_1440 IPR001347 Sugar isomerase (SIS) CH55_1440 IPR005486 Glucokinase regulatory protein, conserved site CH55_1440 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CH55_1440 IPR009060 UBA-like CH55_1441 IPR000281 Helix-turn-helix protein RpiR CH55_1441 IPR001347 Sugar isomerase (SIS) CH55_1441 IPR009057 Homeodomain-like CH55_1441 IPR036388 CH55_1441 CH55_1442 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_1442 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_1443 IPR002686 Transposase IS200-like CH55_1443 IPR036515 CH55_1443 CH55_1444 IPR002582 Holo-[acyl carrier protein] synthase CH55_1444 IPR004568 Phosphopantethiene-protein transferase domain CH55_1444 IPR008278 4'-phosphopantetheinyl transferase superfamily CH55_1444 IPR037143 CH55_1444 CH55_1445 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CH55_1445 IPR013785 Aldolase-type TIM barrel CH55_1445 IPR036130 CH55_1445 CH55_1446 IPR003717 Recombination protein O, RecO CH55_1446 IPR012340 Nucleic acid-binding, OB-fold CH55_1446 IPR022572 DNA replication/recombination mediator RecO, N-terminal CH55_1446 IPR037278 CH55_1446 CH55_1447 IPR004044 K Homology domain, type 2 CH55_1447 IPR005225 Small GTP-binding protein domain CH55_1447 IPR005662 GTP-binding protein Era CH55_1447 IPR006073 GTP binding domain CH55_1447 IPR009019 K homology domain, prokaryotic type CH55_1447 IPR015946 K homology domain-like, alpha/beta CH55_1447 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1448 IPR000999 Ribonuclease III domain CH55_1448 IPR011907 Ribonuclease III CH55_1448 IPR014720 Double-stranded RNA-binding domain CH55_1448 IPR036389 CH55_1448 CH55_1449 IPR000223 Peptidase S26A, signal peptidase I CH55_1449 IPR015927 Peptidase S24/S26A/S26B/S26C CH55_1449 IPR019533 Peptidase S26 CH55_1449 IPR019756 Peptidase S26A, signal peptidase I, serine active site CH55_1449 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CH55_1449 IPR019758 Peptidase S26A, signal peptidase I, conserved site CH55_1449 IPR036286 CH55_1449 CH55_145 IPR013396 CRISPR-associated protein Csy4 CH55_1450 IPR000640 Translation elongation factor EFG, V domain CH55_1450 IPR000795 Elongation factor, GTP-binding domain CH55_1450 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CH55_1450 IPR005225 Small GTP-binding protein domain CH55_1450 IPR006297 Elongation factor 4 CH55_1450 IPR013842 GTP-binding protein LepA, C-terminal CH55_1450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1450 IPR031157 CH55_1450 CH55_1450 IPR035647 CH55_1450 CH55_1450 IPR038363 CH55_1450 CH55_1452 IPR026268 Protein RseC CH55_1453 IPR005588 MucB/RseB CH55_1453 IPR033434 CH55_1453 CH55_1453 IPR033436 CH55_1453 CH55_1453 IPR038484 CH55_1453 CH55_1454 IPR005572 Anti sigma-E protein RseA, N-terminal CH55_1454 IPR005573 Anti sigma-E protein RseA, C-terminal CH55_1454 IPR026279 Sigma-E factor negative regulatory protein RseA CH55_1454 IPR036147 CH55_1454 CH55_1455 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CH55_1455 IPR007627 RNA polymerase sigma-70 region 2 CH55_1455 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CH55_1455 IPR013324 RNA polymerase sigma factor, region 3/4 CH55_1455 IPR013325 RNA polymerase sigma factor, region 2 CH55_1455 IPR014284 RNA polymerase sigma-70 like domain CH55_1455 IPR014286 RNA polymerase sigma-70 RpoE type CH55_1455 IPR036388 CH55_1455 CH55_1456 IPR003953 FAD binding domain CH55_1456 IPR005288 L-aspartate oxidase CH55_1456 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CH55_1456 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CH55_1456 IPR036188 CH55_1456 CH55_1456 IPR037099 CH55_1456 CH55_1457 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_1457 IPR007848 Methyltransferase small domain CH55_1457 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase CH55_1457 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1458 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CH55_1458 IPR001650 Helicase, C-terminal CH55_1458 IPR011545 DEAD/DEAH box helicase domain CH55_1458 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_1458 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1458 IPR028621 ATP-dependent RNA helicase SrmB CH55_146 IPR023210 NADP-dependent oxidoreductase domain CH55_146 IPR036812 CH55_146 CH55_1460 IPR002110 Ankyrin repeat CH55_1460 IPR036770 CH55_1460 CH55_1462 IPR024499 Protein of unknown function DUF2974 CH55_1462 IPR029058 Alpha/Beta hydrolase fold CH55_1463 IPR001150 Glycine radical domain CH55_1463 IPR011140 Autonomous glycyl radical cofactor GrcA CH55_1463 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH55_1464 IPR002043 Uracil-DNA glycosylase CH55_1464 IPR005122 Uracil-DNA glycosylase-like CH55_1464 IPR018085 Uracil-DNA glycosylase, active site CH55_1464 IPR036895 CH55_1464 CH55_1465 IPR000816 Peptidase C15, pyroglutamyl peptidase I CH55_1465 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CH55_1465 IPR029762 Pyroglutamyl peptidase I, bacterial-type CH55_1465 IPR033693 CH55_1465 CH55_1465 IPR033694 CH55_1465 CH55_1465 IPR036440 CH55_1465 CH55_1466 IPR009323 Protein of unknown function DUF979 CH55_1467 IPR010374 Protein of unknown function DUF969 CH55_1468 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CH55_1468 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_1469 IPR003778 Allophanate hydrolase subunit 2 CH55_1469 IPR029000 Cyclophilin-like domain CH55_147 IPR036812 CH55_147 CH55_1470 IPR003833 Allophanate hydrolase subunit 1 CH55_1470 IPR010016 Sensor histidine kinase inhibitor, KipI family CH55_1470 IPR029000 Cyclophilin-like domain CH55_1472 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CH55_1472 IPR036069 CH55_1472 CH55_1473 IPR000396 Cyclic-AMP phosphodiesterase, class-II CH55_1473 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site CH55_1473 IPR036866 CH55_1473 CH55_1474 IPR002081 Cryptochrome/DNA photolyase, class 1 CH55_1474 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal CH55_1474 IPR006050 DNA photolyase, N-terminal CH55_1474 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1474 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal CH55_1474 IPR036134 CH55_1474 CH55_1474 IPR036155 CH55_1474 CH55_1475 IPR013560 Domain of unknown function DUF1722 CH55_1476 IPR019663 Uncharacterised protein YbfA CH55_1477 IPR004623 Potassium-transporting ATPase A chain CH55_1478 IPR001757 Cation-transporting P-type ATPase CH55_1478 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA CH55_1478 IPR008250 P-type ATPase, A domain CH55_1478 IPR018303 P-type ATPase, phosphorylation site CH55_1478 IPR023298 P-type ATPase, transmembrane domain CH55_1478 IPR023299 P-type ATPase, cytoplasmic domain N CH55_1478 IPR036412 CH55_1478 CH55_1479 IPR003820 Potassium-transporting ATPase C chain CH55_148 IPR014826 Formaldehyde-activating enzyme CH55_148 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_148 IPR037075 CH55_148 CH55_1480 IPR003018 GAF domain CH55_1480 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_1480 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_1480 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CH55_1480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_1480 IPR025201 Sensor protein KdpD, transmembrane domain CH55_1480 IPR029016 GAF domain-like CH55_1480 IPR036097 CH55_1480 CH55_1480 IPR036890 CH55_1480 CH55_1480 IPR038318 CH55_1480 CH55_1481 IPR001789 Signal transduction response regulator, receiver domain CH55_1481 IPR001867 Signal transduction response regulator, C-terminal CH55_1481 IPR011006 CheY-like superfamily CH55_1481 IPR036388 CH55_1481 CH55_1482 IPR000620 Drug/metabolite transporter CH55_1485 IPR005843 Alpha-D-phosphohexomutase, C-terminal CH55_1485 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CH55_1485 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CH55_1485 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CH55_1485 IPR005852 Phosphoglucomutase, alpha-D-glucose specific CH55_1485 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CH55_1485 IPR016066 Alpha-D-phosphohexomutase, conserved site CH55_1485 IPR036900 CH55_1485 CH55_1486 IPR005621 Regulation modulator SeqA CH55_1486 IPR010985 Ribbon-helix-helix CH55_1486 IPR013321 Arc-type ribbon-helix-helix CH55_1486 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain CH55_1486 IPR033761 CH55_1486 CH55_1486 IPR036835 CH55_1486 CH55_1489 IPR006879 Uncharacterised protein family UPF0249/HpnK CH55_1489 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_1489 IPR022948 Uncharacterised protein family UPF0249 CH55_149 IPR005828 General substrate transporter CH55_149 IPR005829 Sugar transporter, conserved site CH55_149 IPR036259 CH55_149 CH55_1490 IPR009057 Homeodomain-like CH55_1490 IPR011051 RmlC-like cupin domain CH55_1490 IPR013096 Cupin 2, conserved barrel CH55_1490 IPR014710 RmlC-like jelly roll fold CH55_1490 IPR018060 DNA binding HTH domain, AraC-type CH55_1490 IPR018062 HTH domain AraC-type, conserved site CH55_1490 IPR020449 Transcription regulator HTH, AraC- type CH55_1491 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit CH55_1491 IPR036542 CH55_1491 CH55_1492 IPR003352 Phosphotransferase system, EIIC CH55_1492 IPR004501 Phosphotransferase system, EIIC component, type 3 CH55_1492 IPR004796 Phosphotransferase system, cellobiose-type IIC component CH55_1493 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH55_1493 IPR036095 CH55_1493 CH55_1494 IPR003691 Putative fluoride ion transporter CrcB CH55_1495 IPR003691 Putative fluoride ion transporter CrcB CH55_1496 IPR003148 Regulator of K+ conductance, N-terminal CH55_1496 IPR013099 Two pore domain potassium channel domain CH55_1496 IPR036291 CH55_1496 CH55_1497 IPR010486 HNS-dependent expression A/B CH55_1497 IPR028623 HNS-dependent expression B CH55_1497 IPR036831 CH55_1497 CH55_1497 IPR038303 CH55_1497 CH55_1498 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria CH55_1498 IPR011541 Nickel/cobalt transporter, high-affinity CH55_1499 IPR004937 Urea transporter CH55_1499 IPR017807 Urea transporter, bacteria CH55_1499 IPR029020 Ammonium/urea transporter CH55_15 IPR014987 Uncharacterised protein family YfcL CH55_1500 IPR002669 Urease accessory protein UreD CH55_1501 IPR003495 CobW/HypB/UreG domain CH55_1501 IPR004400 Urease accessory protein UreG CH55_1501 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase CH55_1501 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1502 IPR002639 Urease accessory protein UreF CH55_1502 IPR038277 CH55_1502 CH55_1503 IPR004029 UreE urease accessory, N-terminal CH55_1503 IPR007864 Urease accessory protein UreE, C-terminal domain CH55_1503 IPR012406 Urease accessory protein UreE CH55_1503 IPR036118 CH55_1503 CH55_1504 IPR005848 Urease, alpha subunit CH55_1504 IPR006680 Amidohydrolase 1 CH55_1504 IPR011059 Metal-dependent hydrolase, composite domain CH55_1504 IPR011612 Urease alpha-subunit, N-terminal domain CH55_1504 IPR017950 Urease active site CH55_1504 IPR029754 Urease nickel binding site CH55_1504 IPR032466 CH55_1504 CH55_1505 IPR002019 Urease, beta subunit CH55_1505 IPR036461 CH55_1505 CH55_1506 IPR002026 Urease, gamma/gamma-beta subunit CH55_1506 IPR012010 Urease, gamma subunit CH55_1506 IPR036463 CH55_1506 CH55_1508 IPR003439 ABC transporter-like CH55_1508 IPR003593 AAA+ ATPase domain CH55_1508 IPR017871 ABC transporter, conserved site CH55_1508 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1509 IPR003439 ABC transporter-like CH55_1509 IPR003593 AAA+ ATPase domain CH55_1509 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_151 IPR000847 Transcription regulator HTH, LysR CH55_151 IPR005119 LysR, substrate-binding CH55_151 IPR036388 CH55_151 CH55_151 IPR036390 CH55_151 CH55_1510 IPR000515 MetI-like domain CH55_1510 IPR035906 CH55_1510 CH55_1511 IPR000515 MetI-like domain CH55_1511 IPR035906 CH55_1511 CH55_1512 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_1512 IPR030678 CH55_1512 CH55_1513 IPR002059 Cold-shock protein, DNA-binding CH55_1513 IPR011129 Cold shock protein CH55_1513 IPR012156 Cold shock, CspA CH55_1513 IPR012340 Nucleic acid-binding, OB-fold CH55_1513 IPR019844 Cold-shock conserved site CH55_1514 IPR006983 MbeD/MobD-like CH55_1515 IPR009587 Protein of unknown function DUF1198 CH55_1516 IPR018994 Protein of unknown function DUF2002 CH55_1517 IPR009435 Acid shock CH55_1517 IPR023497 Acid shock protein CH55_1518 IPR002109 Glutaredoxin CH55_1518 IPR011909 Glutaredoxin-like protein NrdH CH55_1518 IPR036249 CH55_1518 CH55_1519 IPR004465 Ribonucleotide reductase Class Ib, NrdI CH55_1519 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CH55_1519 IPR029039 Flavoprotein-like CH55_152 IPR001690 Autoinducer synthesis protein CH55_152 IPR016181 Acyl-CoA N-acyltransferase CH55_152 IPR018311 Autoinducer synthesis, conserved site CH55_1520 IPR000788 Ribonucleotide reductase large subunit, C-terminal CH55_1520 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CH55_1520 IPR013346 Ribonucleotide reductase, class I , alpha subunit CH55_1520 IPR013509 Ribonucleotide reductase large subunit, N-terminal CH55_1520 IPR013554 Ribonucleotide reductase N-terminal CH55_1520 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE CH55_1521 IPR000358 Ribonucleotide reductase small subunit CH55_1521 IPR009078 Ferritin-like superfamily CH55_1521 IPR012348 Ribonucleotide reductase-related CH55_1521 IPR026494 Ribonucleoside reductase subunit beta, NrdF CH55_1521 IPR030475 CH55_1521 CH55_1522 IPR000644 CBS domain CH55_1522 IPR003439 ABC transporter-like CH55_1522 IPR003593 AAA+ ATPase domain CH55_1522 IPR005892 Glycine betaine transport ATP-binding subunit CH55_1522 IPR017871 ABC transporter, conserved site CH55_1522 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1523 IPR000515 MetI-like domain CH55_1523 IPR035906 CH55_1523 CH55_1524 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CH55_1525 IPR002509 Polysaccharide deacetylase CH55_1525 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_1526 IPR001584 Integrase, catalytic core CH55_1526 IPR006120 Resolvase, HTH domain CH55_1526 IPR009057 Homeodomain-like CH55_1526 IPR012337 Ribonuclease H-like domain CH55_1527 IPR002611 IstB-like ATP-binding protein CH55_1528 IPR002611 IstB-like ATP-binding protein CH55_1528 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1529 IPR010998 Integrase, Lambda-type, N-terminal CH55_1529 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_1529 IPR025166 Domain of unknown function DUF4102 CH55_1529 IPR038488 CH55_1529 CH55_153 IPR000792 Transcription regulator LuxR, C-terminal CH55_153 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CH55_153 IPR016032 Signal transduction response regulator, C-terminal effector CH55_153 IPR036388 CH55_153 CH55_153 IPR036693 CH55_153 CH55_1530 IPR002514 Transposase IS3/IS911family CH55_1530 IPR009057 Homeodomain-like CH55_1532 IPR000073 Alpha/beta hydrolase fold-1 CH55_1532 IPR029058 Alpha/Beta hydrolase fold CH55_1534 IPR002145 Ribbon-helix-helix protein, copG CH55_1535 IPR001226 Flavodoxin, conserved site CH55_1535 IPR008254 Flavodoxin/nitric oxide synthase CH55_1535 IPR010086 Flavodoxin, long chain CH55_1535 IPR029039 Flavoprotein-like CH55_1536 IPR002481 Ferric-uptake regulator CH55_1536 IPR036388 CH55_1536 CH55_1536 IPR036390 CH55_1536 CH55_1537 IPR004867 Chitobiase/beta-hexosaminidase C-terminal domain CH55_1537 IPR013783 Immunoglobulin-like fold CH55_1537 IPR014756 Immunoglobulin E-set CH55_1537 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal CH55_1537 IPR015883 Glycoside hydrolase family 20, catalytic core CH55_1537 IPR017853 Glycoside hydrolase, superfamily CH55_1537 IPR025705 Beta-hexosaminidase CH55_1537 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like CH55_1538 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain CH55_1538 IPR008965 Carbohydrate-binding domain CH55_1538 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain CH55_1539 IPR005318 Outer membrane porin, bacterial CH55_1539 IPR023614 Porin domain CH55_154 IPR000620 Drug/metabolite transporter CH55_1540 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CH55_1540 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_1540 IPR004514 Glutamine-tRNA synthetase CH55_1540 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CH55_1540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1540 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CH55_1540 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CH55_1540 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CH55_1540 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain CH55_1540 IPR022861 Glutamine-tRNA ligase, bacterial CH55_1541 IPR002686 Transposase IS200-like CH55_1541 IPR036515 CH55_1541 CH55_1542 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CH55_1542 IPR001996 Phosphotransferase system, IIB component, type 1 CH55_1542 IPR003352 Phosphotransferase system, EIIC CH55_1542 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CH55_1542 IPR011055 Duplicated hybrid motif CH55_1542 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH55_1542 IPR036878 CH55_1542 CH55_1543 IPR004547 Glucosamine-6-phosphate isomerase CH55_1543 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CH55_1543 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CH55_1543 IPR037171 CH55_1543 CH55_1544 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CH55_1544 IPR006680 Amidohydrolase 1 CH55_1544 IPR011059 Metal-dependent hydrolase, composite domain CH55_1544 IPR032466 CH55_1544 CH55_1545 IPR000600 ROK CH55_1545 IPR000835 MarR-type HTH domain CH55_1545 IPR036388 CH55_1545 CH55_1545 IPR036390 CH55_1545 CH55_1546 IPR006357 HAD-superfamily hydrolase, subfamily IIA CH55_1546 IPR023214 HAD-like domain CH55_1546 IPR036412 CH55_1546 CH55_1547 IPR001962 Asparagine synthase CH55_1547 IPR006426 Asparagine synthase, glutamine-hydrolyzing CH55_1547 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1547 IPR017932 Glutamine amidotransferase type 2 domain CH55_1547 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_1554 IPR002938 Monooxygenase, FAD-binding CH55_1554 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 CH55_1554 IPR036188 CH55_1554 CH55_1555 IPR002792 TRAM domain CH55_1555 IPR005839 Methylthiotransferase CH55_1555 IPR006463 tRNA-i(6)A37 modification enzyme MiaB CH55_1555 IPR006638 Elongator protein 3/MiaB/NifB CH55_1555 IPR007197 Radical SAM CH55_1555 IPR013848 Methylthiotransferase, N-terminal CH55_1555 IPR020612 Methylthiotransferase, conserved site CH55_1555 IPR023404 Radical SAM, alpha/beta horseshoe CH55_1555 IPR038135 CH55_1555 CH55_1556 IPR003714 PhoH-like protein CH55_1556 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1557 IPR002036 Endoribonuclease YbeY CH55_1557 IPR020549 Endoribonuclease YbeY, conserved site CH55_1557 IPR023091 Metalloprotease catalytic domain, predicted CH55_1558 IPR000644 CBS domain CH55_1558 IPR005170 Transporter-associated domain CH55_1558 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_1558 IPR036318 CH55_1558 CH55_1559 IPR003010 Carbon-nitrogen hydrolase CH55_1559 IPR004563 Apolipoprotein N-acyltransferase CH55_1559 IPR036526 CH55_1559 CH55_156 IPR001763 Rhodanese-like domain CH55_156 IPR020936 Uncharacterised protein family UPF0176 CH55_156 IPR022111 Protein of unknown function DUF3650 CH55_156 IPR036873 CH55_156 CH55_1560 IPR001638 Extracellular solute-binding protein, family 3 CH55_1561 IPR000515 MetI-like domain CH55_1561 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_1561 IPR035906 CH55_1561 CH55_1562 IPR000515 MetI-like domain CH55_1562 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_1562 IPR035906 CH55_1562 CH55_1563 IPR003439 ABC transporter-like CH55_1563 IPR003593 AAA+ ATPase domain CH55_1563 IPR017871 ABC transporter, conserved site CH55_1563 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1563 IPR030679 CH55_1563 CH55_1564 IPR009912 Protein of unknown function DUF1451 CH55_1565 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_1565 IPR002300 Aminoacyl-tRNA synthetase, class Ia CH55_1565 IPR002302 Leucine-tRNA ligase CH55_1565 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CH55_1565 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CH55_1565 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CH55_1565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1565 IPR025709 Leucyl-tRNA synthetase, editing domain CH55_1566 IPR007485 Lipopolysaccharide assembly, LptE CH55_1567 IPR005790 DNA polymerase III, delta subunit CH55_1567 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH55_1567 IPR010372 DNA polymerase III, delta CH55_1567 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1567 IPR032780 CH55_1567 CH55_1568 IPR004821 Cytidyltransferase-like domain CH55_1568 IPR005248 Probable nicotinate-nucleotide adenylyltransferase CH55_1568 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1569 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CH55_157 IPR002549 Uncharacterised protein family UPF0118 CH55_1570 IPR003742 SPOUT methyltransferase, predicted CH55_1570 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_1570 IPR029028 Alpha/beta knot methyltransferases CH55_1571 IPR001460 Penicillin-binding protein, transpeptidase CH55_1571 IPR005311 Penicillin-binding protein, dimerisation domain CH55_1571 IPR012338 Beta-lactamase/transpeptidase-like CH55_1571 IPR017790 Penicillin-binding protein 2 CH55_1571 IPR036138 CH55_1571 CH55_1572 IPR001182 Cell cycle protein FtsW/RodA CH55_1572 IPR011923 Rod shape-determining protein RodA CH55_1572 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CH55_1573 IPR007730 Sporulation-related domain CH55_1573 IPR009009 RlpA-like double-psi beta-barrel domain CH55_1573 IPR012997 Rare lipoprotein A, bacterial CH55_1573 IPR034718 CH55_1573 CH55_1573 IPR036680 CH55_1573 CH55_1573 IPR036908 CH55_1573 CH55_1574 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CH55_1574 IPR012338 Beta-lactamase/transpeptidase-like CH55_1574 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CH55_1575 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CH55_1575 IPR015956 Penicillin-binding protein-associated CH55_1575 IPR037167 CH55_1575 CH55_1576 IPR007454 Uncharacterised protein family UPF0250 CH55_1576 IPR027471 YbeD-like domain CH55_1577 IPR000544 Octanoyltransferase CH55_1577 IPR004143 Biotin/lipoate A/B protein ligase CH55_1577 IPR020605 Octanoyltransferase, conserved site CH55_1578 IPR003698 Lipoyl synthase CH55_1578 IPR006638 Elongator protein 3/MiaB/NifB CH55_1578 IPR007197 Radical SAM CH55_1578 IPR013785 Aldolase-type TIM barrel CH55_1578 IPR031691 CH55_1578 CH55_1579 IPR003369 Sec-independent protein translocase protein TatA/B/E CH55_1579 IPR006312 Sec-independent protein translocase protein TatA/E CH55_1579 IPR024905 Sec-independent protein translocase protein TatE CH55_158 IPR000792 Transcription regulator LuxR, C-terminal CH55_158 IPR016032 Signal transduction response regulator, C-terminal effector CH55_158 IPR036388 CH55_158 CH55_1580 IPR003691 Putative fluoride ion transporter CrcB CH55_1581 IPR002059 Cold-shock protein, DNA-binding CH55_1581 IPR011129 Cold shock protein CH55_1581 IPR012156 Cold shock, CspA CH55_1581 IPR012340 Nucleic acid-binding, OB-fold CH55_1581 IPR019844 Cold-shock conserved site CH55_1582 IPR002059 Cold-shock protein, DNA-binding CH55_1582 IPR012340 Nucleic acid-binding, OB-fold CH55_1583 IPR000792 Transcription regulator LuxR, C-terminal CH55_1583 IPR016032 Signal transduction response regulator, C-terminal effector CH55_1583 IPR036388 CH55_1583 CH55_1586 IPR015065 Glycogen synthesis protein CH55_1586 IPR036745 CH55_1586 CH55_1587 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CH55_1587 IPR011008 Dimeric alpha-beta barrel CH55_1588 IPR003439 ABC transporter-like CH55_1588 IPR003593 AAA+ ATPase domain CH55_1588 IPR011527 ABC transporter type 1, transmembrane domain CH55_1588 IPR017871 ABC transporter, conserved site CH55_1588 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1588 IPR036640 CH55_1588 CH55_159 IPR006076 FAD dependent oxidoreductase CH55_159 IPR023493 N-methyl-L-tryptophan oxidase MTOX CH55_159 IPR036188 CH55_159 CH55_1590 IPR011051 RmlC-like cupin domain CH55_1590 IPR014710 RmlC-like jelly roll fold CH55_1590 IPR021120 KduI/IolB isomerase CH55_1590 IPR024203 5-deoxy-glucuronate isomerase, IolB CH55_1591 IPR013022 Xylose isomerase-like, TIM barrel domain CH55_1591 IPR030823 CH55_1591 CH55_1591 IPR036237 CH55_1591 CH55_1592 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH55_1592 IPR011611 Carbohydrate kinase PfkB CH55_1592 IPR013785 Aldolase-type TIM barrel CH55_1592 IPR018659 Protein of unknown function DUF2090 CH55_1592 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CH55_1592 IPR029056 Ribokinase-like CH55_1592 IPR030830 CH55_1592 CH55_1593 IPR000683 Oxidoreductase, N-terminal CH55_1593 IPR004104 Oxidoreductase, C-terminal CH55_1593 IPR036291 CH55_1593 CH55_1594 IPR001851 ABC transporter, permease CH55_1595 IPR003439 ABC transporter-like CH55_1595 IPR003593 AAA+ ATPase domain CH55_1595 IPR017871 ABC transporter, conserved site CH55_1595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1596 IPR025997 Periplasmic binding protein domain CH55_1596 IPR028082 Periplasmic binding protein-like I CH55_1597 IPR004104 Oxidoreductase, C-terminal CH55_1598 IPR000683 Oxidoreductase, N-terminal CH55_1598 IPR036291 CH55_1598 CH55_1599 IPR000399 TPP-binding enzyme, conserved site CH55_1599 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH55_1599 IPR012000 Thiamine pyrophosphate enzyme, central domain CH55_1599 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH55_1599 IPR029035 DHS-like NAD/FAD-binding domain CH55_1599 IPR029061 Thiamin diphosphate-binding fold CH55_1599 IPR030817 CH55_1599 CH55_16 IPR006076 FAD dependent oxidoreductase CH55_16 IPR008471 MnmC-like methyltransferase CH55_16 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CH55_16 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CH55_16 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_16 IPR036188 CH55_16 CH55_160 IPR025730 Biofilm regulator BssS CH55_1600 IPR010061 Methylmalonate-semialdehyde dehydrogenase CH55_1600 IPR015590 Aldehyde dehydrogenase domain CH55_1600 IPR016160 Aldehyde dehydrogenase, cysteine active site CH55_1600 IPR016161 Aldehyde/histidinol dehydrogenase CH55_1600 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_1600 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_1602 IPR000281 Helix-turn-helix protein RpiR CH55_1602 IPR001347 Sugar isomerase (SIS) CH55_1602 IPR009057 Homeodomain-like CH55_1602 IPR036388 CH55_1602 CH55_1603 IPR009898 Protein of unknown function DUF1440 CH55_1605 IPR001599 Alpha-2-macroglobulin CH55_1605 IPR002890 Alpha-2-macroglobulin, N-terminal CH55_1605 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CH55_1605 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CH55_1606 IPR002686 Transposase IS200-like CH55_1606 IPR036515 CH55_1606 CH55_1607 IPR002686 Transposase IS200-like CH55_1607 IPR036515 CH55_1607 CH55_1609 IPR001264 Glycosyl transferase, family 51 CH55_1609 IPR001460 Penicillin-binding protein, transpeptidase CH55_1609 IPR009647 Penicillin-binding, C-terminal CH55_1609 IPR011815 Penicillin-binding protein 1C CH55_1609 IPR012338 Beta-lactamase/transpeptidase-like CH55_1609 IPR023346 Lysozyme-like domain CH55_1609 IPR036950 CH55_1609 CH55_161 IPR001207 Transposase, mutator type CH55_1610 IPR010982 Lambda repressor-like, DNA-binding domain CH55_1610 IPR038722 CH55_1610 CH55_1614 IPR010665 Protein of unknown function DUF1240 CH55_1615 IPR010665 Protein of unknown function DUF1240 CH55_1616 IPR008514 Type VI secretion system effector, Hcp CH55_1616 IPR036624 CH55_1616 CH55_1619 IPR003991 Pertactin virulence factor family CH55_1619 IPR004899 Pertactin, central region CH55_1619 IPR005546 Autotransporter beta-domain CH55_1619 IPR006315 Outer membrane autotransporter barrel CH55_1619 IPR011050 Pectin lyase fold/virulence factor CH55_1619 IPR036709 CH55_1619 CH55_162 IPR010391 DNA damage-inducible protein DinI-like CH55_162 IPR036687 CH55_162 CH55_1620 IPR021561 Protein of unknown function DUF2893 CH55_1620 IPR033455 CH55_1620 CH55_1622 IPR001207 Transposase, mutator type CH55_1623 IPR018677 Protein of unknown function DUF2157, membrane CH55_1623 IPR025513 Domain of unknown function DUF4401 CH55_1624 IPR025833 GDYXXLXY protein CH55_1625 IPR001764 Glycoside hydrolase, family 3, N-terminal CH55_1625 IPR002772 Glycoside hydrolase family 3 C-terminal domain CH55_1625 IPR013783 Immunoglobulin-like fold CH55_1625 IPR017853 Glycoside hydrolase, superfamily CH55_1625 IPR019800 Glycoside hydrolase, family 3, active site CH55_1625 IPR026891 Fibronectin type III-like domain CH55_1625 IPR036881 CH55_1625 CH55_1625 IPR036962 CH55_1625 CH55_1627 IPR018170 Aldo/keto reductase, conserved site CH55_1627 IPR020471 Aldo/keto reductase subgroup CH55_1627 IPR023210 NADP-dependent oxidoreductase domain CH55_1627 IPR036812 CH55_1627 CH55_1628 IPR023210 NADP-dependent oxidoreductase domain CH55_1628 IPR036812 CH55_1628 CH55_1629 IPR000847 Transcription regulator HTH, LysR CH55_1629 IPR005119 LysR, substrate-binding CH55_1629 IPR036388 CH55_1629 CH55_1629 IPR036390 CH55_1629 CH55_163 IPR002195 Dihydroorotase, conserved site CH55_163 IPR004721 Dihydroorotase homodimeric type CH55_163 IPR006680 Amidohydrolase 1 CH55_163 IPR032466 CH55_163 CH55_1630 IPR001584 Integrase, catalytic core CH55_1630 IPR006120 Resolvase, HTH domain CH55_1630 IPR009057 Homeodomain-like CH55_1630 IPR012337 Ribonuclease H-like domain CH55_1631 IPR002611 IstB-like ATP-binding protein CH55_1631 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1632 IPR002611 IstB-like ATP-binding protein CH55_1635 IPR000340 Dual specificity phosphatase, catalytic domain CH55_1635 IPR003595 Protein-tyrosine phosphatase, catalytic CH55_1635 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain CH55_1635 IPR026841 CH55_1635 CH55_1635 IPR029021 Protein-tyrosine phosphatase-like CH55_1636 IPR022742 Putative lysophospholipase CH55_1636 IPR022744 Methyltransferase domain, putative CH55_1636 IPR029058 Alpha/Beta hydrolase fold CH55_1636 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1637 IPR002123 Phospholipid/glycerol acyltransferase CH55_1638 IPR000374 Phosphatidate cytidylyltransferase CH55_1639 IPR000462 CDP-alcohol phosphatidyltransferase CH55_164 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CH55_164 IPR011008 Dimeric alpha-beta barrel CH55_1641 IPR038522 CH55_1641 CH55_1646 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CH55_1646 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CH55_1646 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CH55_1646 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CH55_1646 IPR036291 CH55_1646 CH55_1647 IPR036986 CH55_1647 CH55_1648 IPR002686 Transposase IS200-like CH55_1648 IPR036515 CH55_1648 CH55_165 IPR001207 Transposase, mutator type CH55_1650 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CH55_1650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1650 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CH55_1650 IPR015803 Cysteine-tRNA ligase CH55_1650 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CH55_1650 IPR032678 CH55_1650 CH55_1651 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CH55_1651 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CH55_1651 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CH55_1651 IPR029000 Cyclophilin-like domain CH55_1652 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CH55_1652 IPR010138 UDP-2,3-diacylglucosamine hydrolase CH55_1652 IPR029052 Metallo-dependent phosphatase-like CH55_1653 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain CH55_1653 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE CH55_1653 IPR033747 CH55_1653 CH55_1653 IPR035893 CH55_1653 CH55_1654 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CH55_1654 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CH55_1654 IPR011054 Rudiment single hybrid motif CH55_1654 IPR013815 ATP-grasp fold, subdomain 1 CH55_1654 IPR016185 Pre-ATP-grasp domain CH55_1655 IPR003838 Permease FtsX-like CH55_1656 IPR003439 ABC transporter-like CH55_1656 IPR003593 AAA+ ATPase domain CH55_1656 IPR017871 ABC transporter, conserved site CH55_1656 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1657 IPR008265 Lipase, GDSL, active site CH55_1657 IPR013830 CH55_1657 CH55_1657 IPR036514 CH55_1657 CH55_1658 IPR002347 Glucose/ribitol dehydrogenase CH55_1658 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_1658 IPR036291 CH55_1658 CH55_1659 IPR011990 Tetratricopeptide-like helical domain CH55_1659 IPR013766 Thioredoxin domain CH55_1659 IPR036249 CH55_1659 CH55_166 IPR003029 Ribosomal protein S1, RNA-binding domain CH55_166 IPR004659 Ribonuclease E/G CH55_166 IPR012340 Nucleic acid-binding, OB-fold CH55_166 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CH55_166 IPR021968 Polyribonucleotide phosphorylase C-terminal CH55_166 IPR022967 RNA-binding domain, S1 CH55_166 IPR028878 Ribonuclease E CH55_1660 IPR001107 Band 7 protein CH55_1660 IPR001972 Stomatin family CH55_1660 IPR018080 Band 7/stomatin-like, conserved site CH55_1660 IPR036013 CH55_1660 CH55_1661 IPR002810 NfeD-like, C-terminal domain CH55_1662 IPR000551 MerR-type HTH domain CH55_1662 IPR009061 DNA binding domain, putative CH55_1662 IPR011789 Cu(I)-responsive transcriptional regulator CH55_1663 IPR001757 Cation-transporting P-type ATPase CH55_1663 IPR006121 Heavy metal-associated domain, HMA CH55_1663 IPR008250 P-type ATPase, A domain CH55_1663 IPR017969 Heavy-metal-associated, conserved site CH55_1663 IPR018303 P-type ATPase, phosphorylation site CH55_1663 IPR023214 HAD-like domain CH55_1663 IPR023298 P-type ATPase, transmembrane domain CH55_1663 IPR023299 P-type ATPase, cytoplasmic domain N CH55_1663 IPR027256 Cation-transporting P-type ATPase, subfamily IB CH55_1663 IPR036163 CH55_1663 CH55_1663 IPR036412 CH55_1663 CH55_1664 IPR002816 Pheromone shutdown, TraB CH55_1665 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CH55_1665 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CH55_1665 IPR036754 CH55_1665 CH55_1668 IPR006179 5'-Nucleotidase/apyrase CH55_1668 IPR008334 5'-Nucleotidase, C-terminal CH55_1668 IPR036907 CH55_1668 CH55_1669 IPR006179 5'-Nucleotidase/apyrase CH55_1669 IPR029052 Metallo-dependent phosphatase-like CH55_167 IPR002942 RNA-binding S4 domain CH55_167 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CH55_167 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH55_167 IPR006225 Pseudouridine synthase, RluC/RluD CH55_167 IPR020103 Pseudouridine synthase, catalytic domain CH55_167 IPR036986 CH55_167 CH55_1670 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CH55_1670 IPR006146 5'-Nucleotidase, conserved site CH55_1670 IPR029052 Metallo-dependent phosphatase-like CH55_1671 IPR006146 5'-Nucleotidase, conserved site CH55_1671 IPR029052 Metallo-dependent phosphatase-like CH55_1672 IPR011701 Major facilitator superfamily CH55_1672 IPR036259 CH55_1672 CH55_1673 IPR003148 Regulator of K+ conductance, N-terminal CH55_1673 IPR004771 K+/H+ exchanger CH55_1673 IPR006153 Cation/H+ exchanger CH55_1673 IPR036291 CH55_1673 CH55_1673 IPR038770 CH55_1673 CH55_1674 IPR011611 Carbohydrate kinase PfkB CH55_1674 IPR029056 Ribokinase-like CH55_1675 IPR003856 Lipopolysaccharide biosynthesis CH55_1676 IPR005841 Alpha-D-phosphohexomutase superfamily CH55_1676 IPR005843 Alpha-D-phosphohexomutase, C-terminal CH55_1676 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CH55_1676 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CH55_1676 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CH55_1676 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CH55_1676 IPR016066 Alpha-D-phosphohexomutase, conserved site CH55_1676 IPR036900 CH55_1676 CH55_1677 IPR001173 Glycosyltransferase 2-like CH55_1677 IPR029044 Nucleotide-diphospho-sugar transferases CH55_1678 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CH55_1678 IPR005835 Nucleotidyl transferase CH55_1678 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CH55_1678 IPR011051 RmlC-like cupin domain CH55_1678 IPR014710 RmlC-like jelly roll fold CH55_1678 IPR029044 Nucleotide-diphospho-sugar transferases CH55_1679 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_1679 IPR028614 GDP-L-fucose synthase CH55_1679 IPR036291 CH55_1679 CH55_168 IPR003697 Maf-like protein CH55_168 IPR029001 Inosine triphosphate pyrophosphatase-like CH55_1680 IPR016040 NAD(P)-binding domain CH55_1680 IPR036291 CH55_1680 CH55_1681 IPR016040 NAD(P)-binding domain CH55_1681 IPR036291 CH55_1681 CH55_1682 IPR001296 Glycosyl transferase, family 1 CH55_1682 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CH55_1687 IPR001173 Glycosyltransferase 2-like CH55_1687 IPR029044 Nucleotide-diphospho-sugar transferases CH55_1689 IPR036188 CH55_1689 CH55_169 IPR003772 Protein of unknown function DUF177 CH55_1690 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_1690 IPR036291 CH55_1690 CH55_1691 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH55_1691 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1691 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1691 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1692 IPR013445 CDP-glucose 4,6-dehydratase CH55_1692 IPR016040 NAD(P)-binding domain CH55_1692 IPR036291 CH55_1692 CH55_1693 IPR005835 Nucleotidyl transferase CH55_1693 IPR013446 Glucose-1-phosphate cytidylyltransferase CH55_1693 IPR029044 Nucleotide-diphospho-sugar transferases CH55_1694 IPR001221 Phenol hydroxylase reductase CH55_1694 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_1694 IPR008333 Oxidoreductase, FAD-binding domain CH55_1694 IPR017938 Riboflavin synthase-like beta-barrel CH55_1694 IPR039261 CH55_1694 CH55_1695 IPR001041 2Fe-2S ferredoxin-type domain CH55_1695 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH55_1695 IPR012675 Beta-grasp domain CH55_1695 IPR036010 CH55_1695 CH55_1696 IPR001015 Ferrochelatase CH55_1696 IPR019772 Ferrochelatase, active site CH55_1697 IPR000850 Adenylate kinase/UMP-CMP kinase CH55_1697 IPR006259 Adenylate kinase subfamily CH55_1697 IPR007862 Adenylate kinase, active site lid domain CH55_1697 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1697 IPR033690 CH55_1697 CH55_1698 IPR001404 Heat shock protein Hsp90 family CH55_1698 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_1698 IPR019805 Heat shock protein Hsp90, conserved site CH55_1698 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_1698 IPR020575 Heat shock protein Hsp90, N-terminal CH55_1698 IPR036890 CH55_1698 CH55_1698 IPR037196 CH55_1698 CH55_1699 IPR000093 DNA recombination protein RecR CH55_1699 IPR006171 Toprim domain CH55_1699 IPR015967 Recombination protein RecR, conserved site CH55_1699 IPR023627 Recombination protein RecR CH55_1699 IPR023628 Recombination protein RecR, C4-type zinc finger CH55_17 IPR014030 Beta-ketoacyl synthase, N-terminal CH55_17 IPR014031 Beta-ketoacyl synthase, C-terminal CH55_17 IPR016039 Thiolase-like CH55_17 IPR018201 Beta-ketoacyl synthase, active site CH55_17 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH55_170 IPR002677 Ribosomal protein L32p CH55_170 IPR011332 Zinc-binding ribosomal protein CH55_1700 IPR004401 Nucleoid-associated protein YbaB CH55_1700 IPR036894 CH55_1700 CH55_1701 IPR001270 ClpA/B family CH55_1701 IPR003593 AAA+ ATPase domain CH55_1701 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH55_1701 IPR012763 DNA polymerase III, subunit gamma/ tau CH55_1701 IPR021029 DNA polymerase III, tau subunit, domain V CH55_1701 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CH55_1701 IPR022754 DNA polymerase III, gamma subunit, domain III CH55_1701 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1701 IPR038249 CH55_1701 CH55_1702 IPR000836 Phosphoribosyltransferase domain CH55_1702 IPR005764 Adenine phosphoribosyl transferase CH55_1702 IPR029057 Phosphoribosyltransferase-like CH55_1703 IPR007401 Protein of unknown function DUF454 CH55_1704 IPR010890 Primosomal replication PriB/PriC CH55_1704 IPR038338 CH55_1704 CH55_1705 IPR019630 Protein of unknown function DUF2496, YbaM-related CH55_1706 IPR006685 Mechanosensitive ion channel MscS CH55_1706 IPR006686 Mechanosensitive ion channel MscS, conserved site CH55_1706 IPR010920 Like-Sm (LSM) domain CH55_1706 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH55_1706 IPR023408 CH55_1706 CH55_1707 IPR024393 Mechanosensitive ion channel MscS, porin domain CH55_1707 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CH55_1708 IPR003787 Sulphur relay, DsrE/F-like protein CH55_1708 IPR027396 DsrEFH-like CH55_1709 IPR001647 DNA-binding HTH domain, TetR-type CH55_1709 IPR009057 Homeodomain-like CH55_1709 IPR013572 Transcription regulator MAATS, C-terminal CH55_1709 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH55_1709 IPR036271 CH55_1709 CH55_171 IPR003664 Fatty acid synthesis PlsX protein CH55_171 IPR012281 Phospholipid biosynthesis protein, PlsX-like CH55_1710 IPR006143 RND efflux pump, membrane fusion protein CH55_1710 IPR032317 CH55_1710 CH55_1711 IPR001036 Acriflavin resistance protein CH55_1711 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CH55_1711 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_1712 IPR002150 Ribosomal protein L31 CH55_1712 IPR027493 Ribosomal protein L31 type B CH55_1712 IPR034704 CH55_1712 CH55_1713 IPR000473 Ribosomal protein L36 CH55_1713 IPR035977 CH55_1713 CH55_1715 IPR019693 Biofilm formation regulator YbaJ CH55_1716 IPR007985 Haemolysin expression modulating, HHA CH55_1716 IPR036666 CH55_1716 CH55_1717 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CH55_1717 IPR036217 CH55_1717 CH55_1717 IPR036388 CH55_1717 CH55_1718 IPR039366 CH55_1718 CH55_1719 IPR003703 Acyl-CoA thioesterase CH55_1719 IPR029069 HotDog domain CH55_172 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CH55_172 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CH55_172 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH55_172 IPR016039 Thiolase-like CH55_1720 IPR001905 Ammonium transporter CH55_1720 IPR018047 Ammonium transporter, conserved site CH55_1720 IPR024041 Ammonium transporter AmtB-like domain CH55_1720 IPR029020 Ammonium/urea transporter CH55_1721 IPR002187 Nitrogen regulatory protein PII CH55_1721 IPR002332 Nitrogen regulatory protein P-II, urydylation site CH55_1721 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH55_1721 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH55_1721 IPR017918 Nitrogen regulatory protein PII, conserved site CH55_1722 IPR003439 ABC transporter-like CH55_1722 IPR003593 AAA+ ATPase domain CH55_1722 IPR011527 ABC transporter type 1, transmembrane domain CH55_1722 IPR017871 ABC transporter, conserved site CH55_1722 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1722 IPR036640 CH55_1722 CH55_1723 IPR003439 ABC transporter-like CH55_1723 IPR003593 AAA+ ATPase domain CH55_1723 IPR011527 ABC transporter type 1, transmembrane domain CH55_1723 IPR017871 ABC transporter, conserved site CH55_1723 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1723 IPR036640 CH55_1723 CH55_1724 IPR000485 AsnC-type HTH domain CH55_1724 IPR011008 Dimeric alpha-beta barrel CH55_1724 IPR019887 Transcription regulator AsnC-type, C-terminal CH55_1724 IPR019888 Transcription regulator AsnC-type CH55_1724 IPR036388 CH55_1724 CH55_1724 IPR036390 CH55_1724 CH55_1725 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_1725 IPR036052 CH55_1725 CH55_1726 IPR000150 Cof protein CH55_1726 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH55_1726 IPR023214 HAD-like domain CH55_1726 IPR023938 HMP-PP phosphatase CH55_1726 IPR036412 CH55_1726 CH55_1727 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_1727 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CH55_1728 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1728 IPR018317 Queuosine biosynthesis protein QueC CH55_1729 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CH55_1729 IPR029069 HotDog domain CH55_173 IPR001227 Acyl transferase domain CH55_173 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CH55_173 IPR014043 Acyl transferase CH55_173 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH55_173 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CH55_173 IPR020801 Polyketide synthase, acyl transferase domain CH55_173 IPR024925 Malonyl CoA-acyl carrier protein transacylase CH55_1730 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CH55_1730 IPR010994 RuvA domain 2-like CH55_1731 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CH55_1731 IPR027304 Trigger factor/SurA domain CH55_1732 IPR000119 Histone-like bacterial DNA-binding protein CH55_1732 IPR010992 Integration host factor (IHF)-like DNA-binding domain CH55_1732 IPR020816 Histone-like DNA-binding protein, conserved site CH55_1733 IPR003111 Peptidase S16, lon N-terminal CH55_1733 IPR003593 AAA+ ATPase domain CH55_1733 IPR003959 ATPase, AAA-type, core CH55_1733 IPR004815 Lon protease, bacterial/eukaryotic-type CH55_1733 IPR008268 Peptidase S16, active site CH55_1733 IPR008269 Peptidase S16, Lon C-terminal CH55_1733 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_1733 IPR015947 PUA-like domain CH55_1733 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_1733 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1733 IPR027543 Lon protease, bacterial CH55_1734 IPR003593 AAA+ ATPase domain CH55_1734 IPR003959 ATPase, AAA-type, core CH55_1734 IPR004487 Clp protease, ATP-binding subunit ClpX CH55_1734 IPR010603 Zinc finger, ClpX C4-type CH55_1734 IPR019489 Clp ATPase, C-terminal CH55_1734 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1734 IPR038366 CH55_1734 CH55_1735 IPR001907 ATP-dependent Clp protease proteolytic subunit CH55_1735 IPR018215 ClpP, active site CH55_1735 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CH55_1735 IPR029045 ClpP/crotonase-like domain CH55_1735 IPR033135 CH55_1735 CH55_1736 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CH55_1736 IPR005215 Trigger factor CH55_1736 IPR008880 Trigger factor, C-terminal domain CH55_1736 IPR008881 Trigger factor, ribosome-binding, bacterial CH55_1736 IPR027304 Trigger factor/SurA domain CH55_1736 IPR036611 CH55_1736 CH55_1736 IPR037041 CH55_1736 CH55_1738 IPR002634 BolA protein CH55_1738 IPR036065 CH55_1738 CH55_1739 IPR005619 Uncharacterised protein family, YajG CH55_1739 IPR012640 Membrane lipoprotein, lipid attachment site CH55_174 IPR002347 Glucose/ribitol dehydrogenase CH55_174 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CH55_174 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_174 IPR036291 CH55_174 CH55_1740 IPR011701 Major facilitator superfamily CH55_1740 IPR036259 CH55_1740 CH55_1741 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like CH55_1741 IPR036777 CH55_1741 CH55_1742 IPR006333 Cytochrome o ubiquinol oxidase subunit II CH55_1742 IPR008972 Cupredoxin CH55_1742 IPR010514 COX aromatic rich motif CH55_1742 IPR036257 CH55_1742 CH55_1743 IPR000883 Cytochrome c oxidase subunit I CH55_1743 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CH55_1743 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CH55_1743 IPR036927 CH55_1743 CH55_1744 IPR000298 Cytochrome c oxidase subunit III domain CH55_1744 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CH55_1744 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CH55_1744 IPR035973 CH55_1744 CH55_1745 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CH55_1745 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CH55_1746 IPR000537 UbiA prenyltransferase family CH55_1746 IPR006369 Protohaem IX farnesyltransferase CH55_1746 IPR030470 CH55_1746 CH55_1747 IPR011701 Major facilitator superfamily CH55_1747 IPR036259 CH55_1747 CH55_1748 IPR007551 Protein of unknown function DUF520 CH55_1748 IPR035570 CH55_1748 CH55_1748 IPR035571 CH55_1748 CH55_1748 IPR036183 CH55_1748 CH55_1749 IPR003710 Ketopantoate reductase ApbA/PanE CH55_1749 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_1749 IPR013328 Dehydrogenase, multihelical CH55_1749 IPR013332 Ketopantoate reductase, N-terminal domain CH55_1749 IPR013752 Ketopantoate reductase, C-terminal domain CH55_1749 IPR036291 CH55_1749 CH55_175 IPR003231 Acyl carrier protein (ACP) CH55_175 IPR006162 Phosphopantetheine attachment site CH55_175 IPR009081 Acyl carrier protein-like CH55_175 IPR036736 CH55_175 CH55_1750 IPR002818 ThiJ/PfpI CH55_1750 IPR006287 DJ-1 CH55_1750 IPR029062 Class I glutamine amidotransferase-like CH55_1751 IPR003720 tRNA sulfurtransferase ThiI CH55_1751 IPR004114 THUMP CH55_1751 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1751 IPR020536 Thil, AANH domain CH55_1751 IPR026340 Thiazole biosynthesis domain CH55_1751 IPR036873 CH55_1751 CH55_1752 IPR003761 Exonuclease VII, small subunit CH55_1752 IPR037004 CH55_1752 CH55_1753 IPR000092 Polyprenyl synthetase CH55_1753 IPR008949 Terpenoid synthase CH55_1753 IPR033749 CH55_1753 CH55_1754 IPR005474 Transketolase, N-terminal CH55_1754 IPR005475 Transketolase-like, pyrimidine-binding domain CH55_1754 IPR005477 Deoxyxylulose-5-phosphate synthase CH55_1754 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CH55_1754 IPR020826 Transketolase binding site CH55_1754 IPR029061 Thiamin diphosphate-binding fold CH55_1754 IPR033248 CH55_1754 CH55_1755 IPR002686 Transposase IS200-like CH55_1755 IPR036515 CH55_1755 CH55_1756 IPR007686 YutG/PgpA domain CH55_1756 IPR026037 Phosphatidylglycerophosphatase A CH55_1756 IPR036681 CH55_1756 CH55_1757 IPR006283 Thiamine-monophosphate kinase CH55_1757 IPR010918 AIR synthase-related protein, C-terminal domain CH55_1757 IPR016188 PurM, N-terminal-like CH55_1757 IPR036676 CH55_1757 CH55_1757 IPR036921 CH55_1757 CH55_1758 IPR006027 NusB/RsmB/TIM44 CH55_1758 IPR011605 NusB antitermination factor CH55_1758 IPR035926 CH55_1758 CH55_1759 IPR002180 6,7-dimethyl-8-ribityllumazine synthase CH55_1759 IPR034964 CH55_1759 CH55_1759 IPR036467 CH55_1759 CH55_176 IPR014030 Beta-ketoacyl synthase, N-terminal CH55_176 IPR014031 Beta-ketoacyl synthase, C-terminal CH55_176 IPR016039 Thiolase-like CH55_176 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CH55_176 IPR018201 Beta-ketoacyl synthase, active site CH55_176 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH55_1760 IPR002125 CMP/dCMP deaminase, zinc-binding CH55_1760 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CH55_1760 IPR004794 Riboflavin biosynthesis protein RibD CH55_1760 IPR011549 Riboflavin-specific deaminase, C-terminal CH55_1760 IPR016192 APOBEC/CMP deaminase, zinc-binding CH55_1760 IPR016193 Cytidine deaminase-like CH55_1760 IPR024072 Dihydrofolate reductase-like domain CH55_1761 IPR003796 Ribonucleotide reductase regulator NrdR-like CH55_1761 IPR005144 ATP-cone CH55_1764 IPR002686 Transposase IS200-like CH55_1764 IPR036515 CH55_1764 CH55_1765 IPR005665 Protein-export membrane protein SecF, bacterial CH55_1765 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH55_1765 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CH55_1765 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CH55_1766 IPR005791 Protein translocase subunit SecD CH55_1766 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CH55_1766 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CH55_1766 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CH55_1766 IPR027398 SecD export protein N-terminal TM domain CH55_1767 IPR003849 Preprotein translocase YajC CH55_1768 IPR002616 tRNA-guanine(15) transglycosylase-like CH55_1768 IPR004803 Queuine tRNA-ribosyltransferase CH55_1768 IPR036511 CH55_1768 CH55_1769 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CH55_1769 IPR036100 CH55_1769 CH55_177 IPR002686 Transposase IS200-like CH55_177 IPR036515 CH55_177 CH55_1770 IPR007431 Acyl carrier protein phosphodiesterase CH55_1770 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria CH55_1771 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CH55_1771 IPR019479 Peroxiredoxin, C-terminal CH55_1771 IPR024706 Peroxiredoxin, AhpC-type CH55_1771 IPR036249 CH55_1771 CH55_1772 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_1773 IPR000101 Gamma-glutamyltranspeptidase CH55_1773 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_1774 IPR002347 Glucose/ribitol dehydrogenase CH55_1774 IPR036291 CH55_1774 CH55_1775 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain CH55_1775 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH55_1775 IPR013780 Glycosyl hydrolase, family 13, all-beta CH55_1775 IPR014756 Immunoglobulin E-set CH55_1775 IPR017069 Maltodextrin glucosidase CH55_1775 IPR017853 Glycoside hydrolase, superfamily CH55_1776 IPR002293 Amino acid/polyamine transporter I CH55_1776 IPR004840 Amino acid permease, conserved site CH55_1776 IPR004841 Amino acid permease/ SLC12A domain CH55_1777 IPR004685 Branched-chain amino acid transport system II carrier protein CH55_1778 IPR011862 Phosphate binding protein CH55_1778 IPR024370 PBP domain CH55_1779 IPR000014 PAS domain CH55_1779 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_1779 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_1779 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_1779 IPR013767 PAS fold CH55_1779 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CH55_1779 IPR021766 Protein of unknown function DUF3329 CH55_1779 IPR035965 CH55_1779 CH55_1779 IPR036097 CH55_1779 CH55_1779 IPR036890 CH55_1779 CH55_178 IPR002686 Transposase IS200-like CH55_178 IPR036515 CH55_178 CH55_1780 IPR001789 Signal transduction response regulator, receiver domain CH55_1780 IPR001867 Signal transduction response regulator, C-terminal CH55_1780 IPR011006 CheY-like superfamily CH55_1780 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CH55_1780 IPR016032 Signal transduction response regulator, C-terminal effector CH55_1780 IPR036388 CH55_1780 CH55_1781 IPR004593 Nuclease SbcCD subunit D CH55_1781 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CH55_1781 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CH55_1781 IPR029052 Metallo-dependent phosphatase-like CH55_1782 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1782 IPR038729 CH55_1782 CH55_1783 IPR000600 ROK CH55_1784 IPR001270 ClpA/B family CH55_1784 IPR002611 IstB-like ATP-binding protein CH55_1784 IPR003593 AAA+ ATPase domain CH55_1784 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1784 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_1785 IPR001584 Integrase, catalytic core CH55_1785 IPR006120 Resolvase, HTH domain CH55_1785 IPR009057 Homeodomain-like CH55_1785 IPR012337 Ribonuclease H-like domain CH55_1786 IPR007476 Putative exonuclease, RdgC CH55_1787 IPR009664 Protein of unknown function DUF1255 CH55_1787 IPR011051 RmlC-like cupin domain CH55_1787 IPR014710 RmlC-like jelly roll fold CH55_1788 IPR000623 Shikimate kinase/Threonine synthase-like 1 CH55_1788 IPR023000 Shikimate kinase, conserved site CH55_1788 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1788 IPR027544 Shikimate kinase 2 CH55_1788 IPR031322 CH55_1788 CH55_1789 IPR001737 Ribosomal RNA adenine methylase transferase CH55_1789 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_179 IPR001544 Aminotransferase, class IV CH55_179 IPR017824 Aminodeoxychorismate lyase, class IV CH55_179 IPR018300 Aminotransferase, class IV, conserved site CH55_179 IPR036038 CH55_179 CH55_1790 IPR013216 Methyltransferase type 11 CH55_1790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1792 IPR009875 PilZ domain CH55_1792 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CH55_1792 IPR012349 FMN-binding split barrel CH55_1792 IPR023787 Type III secretion system flagellar brake protein YcgR CH55_1793 IPR002686 Transposase IS200-like CH55_1793 IPR036515 CH55_1793 CH55_1794 IPR000965 Gamma-glutamyl phosphate reductase GPR CH55_1794 IPR012134 Glutamate-5-semialdehyde dehydrogenase CH55_1794 IPR015590 Aldehyde dehydrogenase domain CH55_1794 IPR016161 Aldehyde/histidinol dehydrogenase CH55_1794 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_1794 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_1794 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CH55_1795 IPR001048 Aspartate/glutamate/uridylate kinase CH55_1795 IPR001057 Glutamate/acetylglutamate kinase CH55_1795 IPR002478 PUA domain CH55_1795 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CH55_1795 IPR011529 Glutamate 5-kinase CH55_1795 IPR015947 PUA-like domain CH55_1795 IPR019797 Glutamate 5-kinase, conserved site CH55_1795 IPR036393 CH55_1795 CH55_1795 IPR036974 CH55_1795 CH55_1796 IPR009986 Sigma factor-binding protein Crl CH55_1796 IPR038208 CH55_1796 CH55_1797 IPR010520 Protein of unknown function DUF1100, hydrolase-like CH55_1797 IPR029058 Alpha/Beta hydrolase fold CH55_1798 IPR000836 Phosphoribosyltransferase domain CH55_1798 IPR023747 Xanthine-guanine phosphoribosyltransferase CH55_1798 IPR029057 Phosphoribosyltransferase-like CH55_1799 IPR032126 CH55_1799 CH55_18 IPR001920 Asp/Glu racemase CH55_18 IPR004380 Aspartate racemase CH55_18 IPR015942 Asp/Glu/hydantoin racemase CH55_18 IPR018187 Asp/Glu racemase, active site CH55_180 IPR003770 Uncharacterised protein family UPF0755, YceG-like CH55_1800 IPR004302 Chitin-binding, domain 3 CH55_1800 IPR013783 Immunoglobulin-like fold CH55_1800 IPR014756 Immunoglobulin E-set CH55_1800 IPR022409 PKD/Chitinase domain CH55_1800 IPR035986 CH55_1800 CH55_1801 IPR002686 Transposase IS200-like CH55_1801 IPR036515 CH55_1801 CH55_1803 IPR001160 Peptidase M20C, Xaa-His dipeptidase CH55_1803 IPR002933 Peptidase M20 CH55_1803 IPR011650 Peptidase M20, dimerisation domain CH55_1804 IPR001126 DNA-repair protein, UmuC-like CH55_1804 IPR017961 DNA polymerase, Y-family, little finger domain CH55_1804 IPR022880 DNA polymerase IV CH55_1804 IPR024728 DNA polymerase type-Y, HhH motif CH55_1804 IPR036775 CH55_1804 CH55_1805 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CH55_1805 IPR030395 CH55_1805 CH55_1806 IPR007495 Protein of unknown function DUF539 CH55_1807 IPR003374 ApbE-like domain CH55_1807 IPR024932 Flavin transferase ApbE CH55_1808 IPR001041 2Fe-2S ferredoxin-type domain CH55_1808 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_1808 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CH55_1808 IPR008333 Oxidoreductase, FAD-binding domain CH55_1808 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit CH55_1808 IPR012675 Beta-grasp domain CH55_1808 IPR017938 Riboflavin synthase-like beta-barrel CH55_1808 IPR036010 CH55_1808 CH55_1808 IPR039261 CH55_1808 CH55_1809 IPR003667 Electron transport complex, Rnf/Nqr CH55_1809 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit CH55_181 IPR018094 Thymidylate kinase CH55_181 IPR018095 Thymidylate kinase, conserved site CH55_181 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_181 IPR039430 CH55_181 CH55_1810 IPR003667 Electron transport complex, Rnf/Nqr CH55_1810 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit CH55_1811 IPR007329 FMN-binding CH55_1811 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit CH55_1812 IPR004338 NADH-quinone reductase NQR2/RnfD CH55_1812 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit CH55_1813 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A CH55_1813 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal CH55_1814 IPR026869 Putative glutamine amidotransferase type 2 CH55_1814 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_1815 IPR005490 L,D-transpeptidase catalytic domain CH55_1815 IPR038063 CH55_1815 CH55_1816 IPR001347 Sugar isomerase (SIS) CH55_1816 IPR004515 Phosphoheptose isomerase CH55_1817 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CH55_1817 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CH55_1817 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CH55_1817 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CH55_1817 IPR036250 CH55_1817 CH55_1817 IPR037069 CH55_1817 CH55_1818 IPR004356 Adhesin operon regulatory protein CH55_182 IPR004622 DNA polymerase III, delta prime subunit CH55_182 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CH55_182 IPR015199 DNA polymerase III, delta subunit, C-terminal CH55_182 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1820 IPR006626 Parallel beta-helix repeat CH55_1820 IPR008638 Filamentous haemagglutinin, N-terminal CH55_1820 IPR011050 Pectin lyase fold/virulence factor CH55_1820 IPR012334 Pectin lyase fold CH55_1820 IPR024973 ESPR domain CH55_1821 IPR005565 Haemolysin activator HlyB CH55_1821 IPR013686 Polypeptide-transport-associated, ShlB-type CH55_1822 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH55_1822 IPR002933 Peptidase M20 CH55_1822 IPR010158 Amidase, hydantoinase/carbamoylase CH55_1822 IPR036264 CH55_1822 CH55_1823 IPR000192 Aminotransferase class V domain CH55_1823 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1823 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1823 IPR015424 Pyridoxal phosphate-dependent transferase CH55_1824 IPR003439 ABC transporter-like CH55_1824 IPR003593 AAA+ ATPase domain CH55_1824 IPR017871 ABC transporter, conserved site CH55_1824 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1824 IPR030679 CH55_1824 CH55_1825 IPR000515 MetI-like domain CH55_1825 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_1825 IPR035906 CH55_1825 CH55_1826 IPR000515 MetI-like domain CH55_1826 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_1826 IPR035906 CH55_1826 CH55_1827 IPR001638 Extracellular solute-binding protein, family 3 CH55_1827 IPR018313 Extracellular solute-binding protein, family 3, conserved site CH55_1828 IPR000281 Helix-turn-helix protein RpiR CH55_1828 IPR001347 Sugar isomerase (SIS) CH55_1828 IPR009057 Homeodomain-like CH55_1828 IPR036388 CH55_1828 CH55_1829 IPR025148 Protein of unknown function DUF4089 CH55_183 IPR001130 TatD family CH55_183 IPR015991 Uncharacterised deoxyribonuclease TatD-type CH55_183 IPR018228 Deoxyribonuclease, TatD-related, conserved site CH55_183 IPR032466 CH55_183 CH55_1830 IPR014087 Amidohydrolase, AtzE type CH55_1830 IPR023631 Amidase signature domain CH55_1830 IPR036928 CH55_1830 CH55_1831 IPR024507 Protein of unknown function DUF3225 CH55_1831 IPR032710 CH55_1831 CH55_1832 IPR011701 Major facilitator superfamily CH55_1832 IPR036259 CH55_1832 CH55_1833 IPR011606 Branched-chain amino acid transport, permease CH55_1834 IPR008407 Branched-chain amino acid transport, AzlD CH55_1835 IPR000835 MarR-type HTH domain CH55_1835 IPR023187 Transcriptional regulator MarR-type, conserved site CH55_1835 IPR036388 CH55_1835 CH55_1835 IPR036390 CH55_1835 CH55_1836 IPR005694 Efflux pump membrane protein Emr CH55_1836 IPR006143 RND efflux pump, membrane fusion protein CH55_1836 IPR032317 CH55_1836 CH55_1837 IPR004638 Drug resistance transporter EmrB/QacA subfamily CH55_1837 IPR011701 Major facilitator superfamily CH55_1837 IPR036259 CH55_1837 CH55_1838 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH55_1838 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CH55_1838 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted CH55_1838 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_1838 IPR029028 Alpha/beta knot methyltransferases CH55_1838 IPR029064 50S ribosomal protein L30e-like CH55_1839 IPR005746 Thioredoxin CH55_1839 IPR013766 Thioredoxin domain CH55_1839 IPR017937 Thioredoxin, conserved site CH55_1839 IPR036249 CH55_1839 CH55_184 IPR001996 Phosphotransferase system, IIB component, type 1 CH55_184 IPR003352 Phosphotransferase system, EIIC CH55_184 IPR011299 PTS system glucose-specific IIBC component CH55_184 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH55_184 IPR036878 CH55_184 CH55_1840 IPR005636 DTW CH55_1841 IPR000182 GNAT domain CH55_1841 IPR003781 CoA-binding CH55_1841 IPR013815 ATP-grasp fold, subdomain 1 CH55_1841 IPR016102 Succinyl-CoA synthetase-like CH55_1841 IPR016181 Acyl-CoA N-acyltransferase CH55_1841 IPR032875 CH55_1841 CH55_1841 IPR036291 CH55_1841 CH55_1842 IPR001736 Phospholipase D/Transphosphatidylase CH55_1842 IPR025202 Phospholipase D-like domain CH55_1843 IPR017028 Uncharacterised conserved protein UCP034456 CH55_1843 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein CH55_1849 IPR001270 ClpA/B family CH55_1849 IPR003593 AAA+ ATPase domain CH55_1849 IPR003959 ATPase, AAA-type, core CH55_1849 IPR004176 Clp, N-terminal CH55_1849 IPR017730 Chaperonin ClpB CH55_1849 IPR018368 ClpA/B, conserved site 1 CH55_1849 IPR019489 Clp ATPase, C-terminal CH55_1849 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1849 IPR028299 ClpA/B, conserved site 2 CH55_1849 IPR036628 CH55_1849 CH55_185 IPR002686 Transposase IS200-like CH55_185 IPR036515 CH55_185 CH55_1850 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CH55_1850 IPR011324 Cytotoxic necrotizing factor-like, catalytic CH55_1850 IPR038371 CH55_1850 CH55_1851 IPR002942 RNA-binding S4 domain CH55_1851 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CH55_1851 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH55_1851 IPR006225 Pseudouridine synthase, RluC/RluD CH55_1851 IPR020103 Pseudouridine synthase, catalytic domain CH55_1851 IPR036986 CH55_1851 CH55_1852 IPR011990 Tetratricopeptide-like helical domain CH55_1852 IPR017689 Outer membrane protein assembly factor BamD CH55_1852 IPR039565 CH55_1852 CH55_1853 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein CH55_1853 IPR036567 CH55_1853 CH55_1854 IPR002686 Transposase IS200-like CH55_1854 IPR036515 CH55_1854 CH55_1855 IPR001086 Prephenate dehydratase CH55_1855 IPR002701 Chorismate mutase CH55_1855 IPR010952 Chorismate mutase, gammaproteobacteria CH55_1855 IPR036263 CH55_1855 CH55_1855 IPR036979 CH55_1855 CH55_1856 IPR001584 Integrase, catalytic core CH55_1856 IPR006120 Resolvase, HTH domain CH55_1856 IPR009057 Homeodomain-like CH55_1856 IPR012337 Ribonuclease H-like domain CH55_1857 IPR001270 ClpA/B family CH55_1857 IPR002611 IstB-like ATP-binding protein CH55_1857 IPR003593 AAA+ ATPase domain CH55_1857 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1857 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_1858 IPR001086 Prephenate dehydratase CH55_1858 IPR018528 Prephenate dehydratase, conserved site CH55_1859 IPR002701 Chorismate mutase CH55_1859 IPR003099 Prephenate dehydrogenase CH55_1859 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein CH55_1859 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_1859 IPR011277 Chorismate mutase, T-protein CH55_1859 IPR036263 CH55_1859 CH55_1859 IPR036291 CH55_1859 CH55_1859 IPR036979 CH55_1859 CH55_186 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CH55_186 IPR036291 CH55_186 CH55_1860 IPR006218 DAHP synthetase I/KDSA CH55_1860 IPR006219 DHAP synthase, class 1 CH55_1860 IPR013785 Aldolase-type TIM barrel CH55_1861 IPR001789 Signal transduction response regulator, receiver domain CH55_1861 IPR007492 LytTR DNA-binding domain CH55_1861 IPR011006 CheY-like superfamily CH55_1862 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CH55_1863 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CH55_1864 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CH55_1865 IPR007433 Protein of unknown function DUF481 CH55_1866 IPR002686 Transposase IS200-like CH55_1866 IPR036515 CH55_1866 CH55_1867 IPR002686 Transposase IS200-like CH55_1867 IPR036515 CH55_1867 CH55_1868 IPR001857 Ribosomal protein L19 CH55_1868 IPR008991 Translation protein SH3-like domain CH55_1868 IPR018257 Ribosomal protein L19, conserved site CH55_1868 IPR038657 CH55_1868 CH55_1869 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CH55_1869 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CH55_1869 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CH55_1869 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_1869 IPR029028 Alpha/beta knot methyltransferases CH55_187 IPR036291 CH55_187 CH55_1870 IPR002676 RimM protein CH55_1870 IPR009000 Translation protein, beta-barrel domain CH55_1870 IPR011033 PRC-barrel-like CH55_1870 IPR011961 16S rRNA processing protein RimM CH55_1870 IPR027275 PRC-barrel domain CH55_1870 IPR036976 CH55_1870 CH55_1871 IPR000307 Ribosomal protein S16 CH55_1871 IPR020592 Ribosomal protein S16, conserved site CH55_1871 IPR023803 Ribosomal protein S16 domain CH55_1872 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CH55_1872 IPR003593 AAA+ ATPase domain CH55_1872 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CH55_1872 IPR004780 Signal recognition particle protein Ffh CH55_1872 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CH55_1872 IPR022941 Signal recognition particle, SRP54 subunit CH55_1872 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1872 IPR036891 CH55_1872 CH55_1873 IPR002541 Cytochrome c assembly protein CH55_1874 IPR000644 CBS domain CH55_1874 IPR002550 Domain of unknown function DUF21 CH55_1874 IPR005170 Transporter-associated domain CH55_1874 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_1874 IPR036318 CH55_1874 CH55_1875 IPR002686 Transposase IS200-like CH55_1875 IPR036515 CH55_1875 CH55_1876 IPR003815 S-ribosylhomocysteinase (LuxS) CH55_1876 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CH55_1876 IPR037005 CH55_1876 CH55_1877 IPR006334 Glutamate--cysteine ligase, monofunctional CH55_1877 IPR007370 Glutamate--cysteine ligase CH55_1877 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CH55_1878 IPR020143 Uncharacterised protein family, RP436 CH55_1879 IPR006439 HAD hydrolase, subfamily IA CH55_1879 IPR010976 Beta-phosphoglucomutase hydrolase CH55_1879 IPR023198 Phosphoglycolate phosphatase, domain 2 CH55_1879 IPR023214 HAD-like domain CH55_1879 IPR036412 CH55_1879 CH55_188 IPR001310 Histidine triad (HIT) protein CH55_188 IPR019808 Histidine triad, conserved site CH55_188 IPR036265 CH55_188 CH55_1884 IPR003751 Carbon storage regulator CH55_1884 IPR036107 CH55_1884 CH55_1885 IPR002318 Alanine-tRNA ligase, class IIc CH55_1885 IPR003156 DHHA1 domain CH55_1885 IPR009000 Translation protein, beta-barrel domain CH55_1885 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CH55_1885 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain CH55_1885 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CH55_1885 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CH55_1885 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CH55_1886 IPR003783 Regulatory protein RecX CH55_1886 IPR036388 CH55_1886 CH55_1887 IPR003593 AAA+ ATPase domain CH55_1887 IPR013765 DNA recombination and repair protein RecA CH55_1887 IPR020584 DNA recombination/repair protein RecA, conserved site CH55_1887 IPR023400 DNA recombination and repair protein RecA, C-terminal CH55_1887 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1888 IPR008136 CinA, C-terminal CH55_1888 IPR036653 CH55_1888 CH55_1889 IPR011701 Major facilitator superfamily CH55_1889 IPR036259 CH55_1889 CH55_189 IPR010824 Protein of unknown function DUF1425 CH55_189 IPR038483 CH55_189 CH55_1890 IPR000835 MarR-type HTH domain CH55_1890 IPR007324 Sugar-binding domain, putative CH55_1890 IPR036390 CH55_1890 CH55_1890 IPR037171 CH55_1890 CH55_1891 IPR009015 L-fucose isomerase, N-terminal/central domain CH55_1891 IPR015888 L-fucose isomerase, C-terminal CH55_1892 IPR000577 CH55_1892 CH55_1892 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_1892 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_1893 IPR005475 Transketolase-like, pyrimidine-binding domain CH55_1893 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CH55_1893 IPR029061 Thiamin diphosphate-binding fold CH55_1893 IPR033248 CH55_1893 CH55_1894 IPR005474 Transketolase, N-terminal CH55_1894 IPR029061 Thiamin diphosphate-binding fold CH55_1895 IPR001851 ABC transporter, permease CH55_1896 IPR003439 ABC transporter-like CH55_1896 IPR003593 AAA+ ATPase domain CH55_1896 IPR017871 ABC transporter, conserved site CH55_1896 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1897 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CH55_1897 IPR036215 CH55_1897 CH55_1898 IPR025997 Periplasmic binding protein domain CH55_1898 IPR028082 Periplasmic binding protein-like I CH55_1899 IPR000763 Catalase-peroxidase haem CH55_1899 IPR002016 Haem peroxidase, plant/fungal/bacterial CH55_1899 IPR010255 Haem peroxidase CH55_1899 IPR019793 Peroxidases heam-ligand binding site CH55_1899 IPR019794 Peroxidase, active site CH55_19 IPR000259 Fimbrial-type adhesion domain CH55_19 IPR008966 Adhesion domain CH55_19 IPR036937 CH55_19 CH55_190 IPR014094 Penicillin-binding protein activator LpoB CH55_1900 IPR009155 Cytochrome b562 CH55_1900 IPR010980 Cytochrome c/b562 CH55_1901 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CH55_1901 IPR016174 Di-haem cytochrome, transmembrane CH55_1902 IPR020945 DMSO/Nitrate reductase chaperone CH55_1902 IPR026269 Tat proofreading chaperone DmsD-type CH55_1902 IPR028611 Tat proofreading chaperone DmsD CH55_1902 IPR036411 CH55_1902 CH55_1903 IPR007059 DMSO reductase anchor subunit (DmsC) CH55_1904 IPR014297 Dimethylsulphoxide reductase, chain B CH55_1904 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_1904 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_1905 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH55_1905 IPR006656 Molybdopterin oxidoreductase CH55_1905 IPR006657 Molydopterin dinucleotide-binding domain CH55_1905 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH55_1905 IPR009010 Aspartate decarboxylase-like domain CH55_1905 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CH55_1905 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH55_1906 IPR001303 Class II aldolase/adducin N-terminal CH55_1906 IPR004661 L-ribulose-5-phosphate 4-epimerase CH55_1906 IPR036409 CH55_1906 CH55_1907 IPR001034 HTH DeoR N-terminal domain CH55_1907 IPR014036 DeoR C-terminal sensor domain CH55_1907 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH55_1907 IPR036390 CH55_1907 CH55_1907 IPR037171 CH55_1907 CH55_1908 IPR025997 Periplasmic binding protein domain CH55_1908 IPR028082 Periplasmic binding protein-like I CH55_1909 IPR002686 Transposase IS200-like CH55_1909 IPR036515 CH55_1909 CH55_191 IPR002575 Aminoglycoside phosphotransferase CH55_191 IPR011009 Protein kinase-like domain CH55_191 IPR014093 Thiamine kinase CH55_1910 IPR003439 ABC transporter-like CH55_1910 IPR003593 AAA+ ATPase domain CH55_1910 IPR017871 ABC transporter, conserved site CH55_1910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1911 IPR001851 ABC transporter, permease CH55_1912 IPR001851 ABC transporter, permease CH55_1913 IPR004560 L-ribulose-5-phosphate 3-epimerase CH55_1913 IPR013022 Xylose isomerase-like, TIM barrel domain CH55_1913 IPR036237 CH55_1913 CH55_1914 IPR000577 CH55_1914 CH55_1914 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_1914 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_1915 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CH55_1915 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CH55_1915 IPR011167 Iron-dependent fumarate hydratase CH55_1915 IPR020557 Fumarate lyase, conserved site CH55_1915 IPR036660 CH55_1915 CH55_1916 IPR021831 Protein of unknown function DUF3423 CH55_1917 IPR000994 Peptidase M24, structural domain CH55_1917 IPR001714 Peptidase M24, methionine aminopeptidase CH55_1917 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CH55_1917 IPR036005 CH55_1917 CH55_1918 IPR012927 ShET2 enterotoxin, N-terminal CH55_1919 IPR000531 TonB-dependent receptor, beta-barrel CH55_1919 IPR012910 TonB-dependent receptor, plug CH55_1919 IPR036942 CH55_1919 CH55_1919 IPR037066 CH55_1919 CH55_192 IPR001764 Glycoside hydrolase, family 3, N-terminal CH55_192 IPR017853 Glycoside hydrolase, superfamily CH55_192 IPR019800 Glycoside hydrolase, family 3, active site CH55_192 IPR022956 Beta-hexosaminidase, bacterial CH55_192 IPR036962 CH55_192 CH55_1921 IPR004852 Di-haem cytochrome c peroxidase CH55_1921 IPR009056 Cytochrome c-like domain CH55_1921 IPR025992 Haem-binding domain CH55_1921 IPR036909 CH55_1921 CH55_1922 IPR001638 Extracellular solute-binding protein, family 3 CH55_1924 IPR006793 FaeA-like protein CH55_1924 IPR036388 CH55_1924 CH55_1925 IPR001845 HTH ArsR-type DNA-binding domain CH55_1925 IPR036388 CH55_1925 CH55_1925 IPR036390 CH55_1925 CH55_1926 IPR000802 Arsenical pump membrane protein, ArsB CH55_1927 IPR007324 Sugar-binding domain, putative CH55_1927 IPR037171 CH55_1927 CH55_1928 IPR004007 DhaL domain CH55_1928 IPR012737 Dihydroxyacetone kinase, subunit L CH55_1928 IPR036117 CH55_1928 CH55_1929 IPR004006 Dak kinase CH55_193 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CH55_193 IPR022987 Uncharacterised protein family UPF0227 CH55_193 IPR029058 Alpha/Beta hydrolase fold CH55_1930 IPR002347 Glucose/ribitol dehydrogenase CH55_1930 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_1930 IPR036291 CH55_1930 CH55_1931 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CH55_1931 IPR011032 GroES (chaperonin 10)-like CH55_1931 IPR013149 Alcohol dehydrogenase, C-terminal CH55_1931 IPR013154 Alcohol dehydrogenase GroES-like CH55_1931 IPR020843 Polyketide synthase, enoylreductase CH55_1931 IPR036291 CH55_1931 CH55_1932 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CH55_1932 IPR004785 Ribose 5-phosphate isomerase B CH55_1932 IPR036569 CH55_1932 CH55_1933 IPR000432 DNA mismatch repair protein MutS, C-terminal CH55_1933 IPR005748 DNA mismatch repair protein MutS, type 1 CH55_1933 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CH55_1933 IPR007696 DNA mismatch repair protein MutS, core CH55_1933 IPR007860 DNA mismatch repair protein MutS, connector domain CH55_1933 IPR007861 DNA mismatch repair protein MutS, clamp CH55_1933 IPR016151 DNA mismatch repair protein MutS, N-terminal CH55_1933 IPR017261 DNA mismatch repair protein Msh6 CH55_1933 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1933 IPR036187 CH55_1933 CH55_1933 IPR036678 CH55_1933 CH55_1934 IPR000943 RNA polymerase sigma-70 CH55_1934 IPR007624 RNA polymerase sigma-70 region 3 CH55_1934 IPR007627 RNA polymerase sigma-70 region 2 CH55_1934 IPR007630 RNA polymerase sigma-70 region 4 CH55_1934 IPR009042 RNA polymerase sigma-70 region 1.2 CH55_1934 IPR012761 RNA polymerase sigma factor RpoS CH55_1934 IPR013324 RNA polymerase sigma factor, region 3/4 CH55_1934 IPR013325 RNA polymerase sigma factor, region 2 CH55_1934 IPR014284 RNA polymerase sigma-70 like domain CH55_1934 IPR036388 CH55_1934 CH55_1935 IPR011055 Duplicated hybrid motif CH55_1935 IPR016047 Peptidase M23 CH55_1935 IPR018392 LysM domain CH55_1935 IPR036779 CH55_1935 CH55_1936 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CH55_1936 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1937 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CH55_1937 IPR030048 CH55_1937 CH55_1937 IPR036523 CH55_1937 CH55_1938 IPR001656 Pseudouridine synthase, TruD CH55_1938 IPR020103 Pseudouridine synthase, catalytic domain CH55_1938 IPR020119 Pseudouridine synthase TruD, conserved site CH55_1939 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CH55_1939 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CH55_1939 IPR036571 CH55_1939 CH55_194 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_194 IPR036188 CH55_194 CH55_1940 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CH55_1940 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CH55_1940 IPR029044 Nucleotide-diphospho-sugar transferases CH55_1940 IPR034683 CH55_1940 CH55_1941 IPR007060 Septum formation initiator FtsL/DivIC CH55_1941 IPR023081 Cell division protein FtsB CH55_1942 IPR022721 Protein of unknown function DUF3561 CH55_1943 IPR002891 Adenylylsulphate kinase CH55_1943 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1944 IPR000795 Elongation factor, GTP-binding domain CH55_1944 IPR005225 Small GTP-binding protein domain CH55_1944 IPR009000 Translation protein, beta-barrel domain CH55_1944 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH55_1944 IPR011779 Sulphate adenylyltransferase, large subunit CH55_1944 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1944 IPR031157 CH55_1944 CH55_1945 IPR002500 Phosphoadenosine phosphosulphate reductase CH55_1945 IPR011784 Sulphate adenylyltransferase, small subunit CH55_1945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1946 IPR000878 Tetrapyrrole methylase CH55_1946 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH55_1946 IPR006366 Uroporphyrin-III C-methyltransferase CH55_1946 IPR006367 Sirohaem synthase, N-terminal CH55_1946 IPR012409 Sirohaem synthase CH55_1946 IPR014776 Tetrapyrrole methylase, subdomain 2 CH55_1946 IPR014777 Tetrapyrrole methylase, subdomain 1 CH55_1946 IPR019478 Sirohaem synthase, dimerisation domain CH55_1946 IPR028281 Siroheme synthase, central domain CH55_1946 IPR035996 CH55_1946 CH55_1946 IPR036291 CH55_1946 CH55_1946 IPR037115 CH55_1946 CH55_1948 IPR012933 HicA mRNA interferase family CH55_1948 IPR038570 CH55_1948 CH55_1949 IPR013321 Arc-type ribbon-helix-helix CH55_1949 IPR031807 CH55_1949 CH55_1949 IPR035069 CH55_1949 CH55_1950 IPR002500 Phosphoadenosine phosphosulphate reductase CH55_1950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1951 IPR002500 Phosphoadenosine phosphosulphate reductase CH55_1951 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1952 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CH55_1952 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site CH55_1952 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CH55_1952 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CH55_1952 IPR036136 CH55_1952 CH55_1953 IPR001094 Flavodoxin CH55_1953 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_1953 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CH55_1953 IPR003097 FAD-binding, type 1 CH55_1953 IPR008254 Flavodoxin/nitric oxide synthase CH55_1953 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CH55_1953 IPR017938 Riboflavin synthase-like beta-barrel CH55_1953 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 CH55_1953 IPR029039 Flavoprotein-like CH55_1953 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CH55_1953 IPR039261 CH55_1953 CH55_1954 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CH55_1954 IPR038418 CH55_1954 CH55_1955 IPR007197 Radical SAM CH55_1955 IPR013785 Aldolase-type TIM barrel CH55_1955 IPR024924 7-carboxy-7-deazaguanine synthase-like CH55_1955 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria CH55_1956 IPR001424 Superoxide dismutase, copper/zinc binding domain CH55_1956 IPR018152 Superoxide dismutase, copper/zinc, binding site CH55_1956 IPR036423 CH55_1956 CH55_1957 IPR000941 Enolase CH55_1957 IPR020809 Enolase, conserved site CH55_1957 IPR020810 Enolase, C-terminal CH55_1957 IPR020811 Enolase, N-terminal CH55_1957 IPR029017 Enolase N-terminal domain-like CH55_1957 IPR036849 CH55_1957 CH55_1958 IPR004468 CTP synthase CH55_1958 IPR017456 CTP synthase, N-terminal CH55_1958 IPR017926 Glutamine amidotransferase CH55_1958 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1958 IPR029062 Class I glutamine amidotransferase-like CH55_1959 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CH55_1959 IPR011551 NTP pyrophosphohydrolase MazG, bacterial CH55_1960 IPR002912 ACT domain CH55_1960 IPR003607 HD/PDEase domain CH55_1960 IPR004095 TGS CH55_1960 IPR004811 RelA/SpoT family CH55_1960 IPR007685 RelA/SpoT CH55_1960 IPR012675 Beta-grasp domain CH55_1960 IPR012676 TGS-like CH55_1961 IPR001789 Signal transduction response regulator, receiver domain CH55_1961 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_1961 IPR003660 HAMP linker domain CH55_1961 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_1961 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_1961 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH55_1961 IPR011006 CheY-like superfamily CH55_1961 IPR019247 Histidine kinase BarA, N-terminal CH55_1961 IPR036097 CH55_1961 CH55_1961 IPR036641 CH55_1961 CH55_1961 IPR036890 CH55_1961 CH55_1962 IPR001478 PDZ domain CH55_1962 IPR001940 Peptidase S1C CH55_1962 IPR009003 Trypsin-like cysteine/serine peptidase domain CH55_1962 IPR011782 Peptidase S1C, Do CH55_1962 IPR036034 CH55_1962 CH55_1963 IPR003607 HD/PDEase domain CH55_1963 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase CH55_1963 IPR006674 HD domain CH55_1963 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria CH55_1963 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CH55_1963 IPR026875 Phosphohydrolase-associated domain CH55_1964 IPR000845 Nucleoside phosphorylase domain CH55_1964 IPR010049 MTA/SAH nucleosidase CH55_1964 IPR035994 CH55_1964 CH55_1965 IPR002491 ABC transporter periplasmic binding domain CH55_1965 IPR023544 ABC transporter, vitamin B12-binding protein CH55_1966 IPR005115 Uncharacterised domain UPF0126 CH55_1967 IPR000361 FeS cluster biogenesis CH55_1967 IPR016092 FeS cluster insertion protein CH55_1967 IPR017870 FeS cluster insertion, C-terminal, conserved site CH55_1967 IPR023063 Iron-sulfur cluster insertion protein ErpA CH55_1967 IPR035903 CH55_1967 CH55_1968 IPR001807 Chloride channel, voltage gated CH55_1968 IPR014743 Chloride channel, core CH55_1968 IPR023861 Chloride channel, ClcA CH55_1969 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CH55_1969 IPR005814 Aminotransferase class-III CH55_1969 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_1969 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_1969 IPR015424 Pyridoxal phosphate-dependent transferase CH55_197 IPR001207 Transposase, mutator type CH55_1970 IPR000522 ABC transporter, permease protein CH55_1970 IPR037294 CH55_1970 CH55_1971 IPR002491 ABC transporter periplasmic binding domain CH55_1972 IPR003439 ABC transporter-like CH55_1972 IPR003593 AAA+ ATPase domain CH55_1972 IPR017871 ABC transporter, conserved site CH55_1972 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1973 IPR001264 Glycosyl transferase, family 51 CH55_1973 IPR001460 Penicillin-binding protein, transpeptidase CH55_1973 IPR011813 Penicillin-binding protein 1B CH55_1973 IPR012338 Beta-lactamase/transpeptidase-like CH55_1973 IPR023346 Lysozyme-like domain CH55_1973 IPR028166 Bifunctional transglycosylase second domain CH55_1973 IPR032730 CH55_1973 CH55_1973 IPR036950 CH55_1973 CH55_1974 IPR001650 Helicase, C-terminal CH55_1974 IPR007502 Helicase-associated domain CH55_1974 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type CH55_1974 IPR011545 DEAD/DEAH box helicase domain CH55_1974 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal CH55_1974 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_1974 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1975 IPR004175 2',5' RNA ligase CH55_1975 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CH55_1976 IPR005224 Sugar fermentation stimulation protein CH55_1977 IPR000962 Zinc finger, DksA/TraR C4-type CH55_1977 IPR012784 RNA polymerase-binding transcription factor DksA CH55_1977 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CH55_1977 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CH55_1977 IPR037187 CH55_1977 CH55_1978 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CH55_1978 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1978 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CH55_1978 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CH55_1979 IPR002646 Poly A polymerase, head domain CH55_1979 IPR010206 Poly(A) polymerase I CH55_1979 IPR025866 Polymerase A arginine-rich C-terminal domain CH55_1979 IPR032828 CH55_1979 CH55_198 IPR001207 Transposase, mutator type CH55_1980 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CH55_1980 IPR035907 CH55_1980 CH55_1981 IPR003700 Ketopantoate hydroxymethyltransferase CH55_1981 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_1982 IPR003721 Pantoate-beta-alanine ligase CH55_1982 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_1983 IPR003190 Aspartate decarboxylase CH55_1983 IPR009010 Aspartate decarboxylase-like domain CH55_1984 IPR002509 Polysaccharide deacetylase CH55_1984 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_1986 IPR000412 ABC-2 transporter CH55_1986 IPR013525 ABC-2 type transporter CH55_1987 IPR003439 ABC transporter-like CH55_1987 IPR003593 AAA+ ATPase domain CH55_1987 IPR017871 ABC transporter, conserved site CH55_1987 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_1988 IPR001765 Carbonic anhydrase CH55_1988 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CH55_1988 IPR036874 CH55_1988 CH55_1989 IPR000836 Phosphoribosyltransferase domain CH55_1989 IPR005904 Hypoxanthine phosphoribosyl transferase CH55_1989 IPR029057 Phosphoribosyltransferase-like CH55_199 IPR008816 Glycine zipper 2TM domain CH55_1990 IPR001117 Multicopper oxidase, type 1 CH55_1990 IPR002355 Multicopper oxidase, copper-binding site CH55_1990 IPR008972 Cupredoxin CH55_1990 IPR011706 Multicopper oxidase, type 2 CH55_1990 IPR011707 Multicopper oxidase, type 3 CH55_1990 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH55_1991 IPR019114 Chaperone lipoprotein, PulS/OutS-like CH55_1991 IPR038432 CH55_1991 CH55_1992 IPR001045 Spermidine/spermine synthases family CH55_1992 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_1992 IPR030373 CH55_1992 CH55_1992 IPR035246 CH55_1992 CH55_1992 IPR037163 CH55_1992 CH55_1993 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CH55_1993 IPR009165 S-adenosylmethionine decarboxylase, bacterial CH55_1993 IPR016067 S-adenosylmethionine decarboxylase, core CH55_1995 IPR008249 Uncharacterised protein family UPF0231 CH55_1996 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CH55_1996 IPR004406 Aconitase B, bacterial CH55_1996 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CH55_1996 IPR015929 Aconitase B, N-terminal, bacterial CH55_1996 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CH55_1996 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 CH55_1996 IPR015933 Aconitase B, HEAT-like, bacterial CH55_1996 IPR018136 Aconitase family, 4Fe-4S cluster binding site CH55_1996 IPR036008 CH55_1996 CH55_1996 IPR036288 CH55_1996 CH55_1997 IPR002686 Transposase IS200-like CH55_1997 IPR036515 CH55_1997 CH55_1998 IPR001100 CH55_1998 CH55_1998 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH55_1998 IPR006258 Dihydrolipoamide dehydrogenase CH55_1998 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CH55_1998 IPR016156 FAD/NAD-linked reductase, dimerisation domain CH55_1998 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_1998 IPR036188 CH55_1998 CH55_1999 IPR000089 Biotin/lipoyl attachment CH55_1999 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CH55_1999 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CH55_1999 IPR004167 E3 binding CH55_1999 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CH55_1999 IPR011053 Single hybrid motif CH55_1999 IPR023213 Chloramphenicol acetyltransferase-like domain CH55_1999 IPR036625 CH55_1999 CH55_2 IPR011990 Tetratricopeptide-like helical domain CH55_2 IPR017560 Cytochrome c-type biogenesis protein CcmI CH55_20 IPR023597 Flagellar regulator Flk CH55_200 IPR001650 Helicase, C-terminal CH55_200 IPR003711 CarD-like/TRCF domain CH55_200 IPR004576 Transcription-repair coupling factor CH55_200 IPR005118 Transcription-repair-coupling factor, C-terminal domain CH55_200 IPR011545 DEAD/DEAH box helicase domain CH55_200 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_200 IPR036101 CH55_200 CH55_200 IPR037235 CH55_200 CH55_2000 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type CH55_2000 IPR005474 Transketolase, N-terminal CH55_2000 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CH55_2000 IPR029061 Thiamin diphosphate-binding fold CH55_2001 IPR000524 Transcription regulator HTH, GntR CH55_2001 IPR008920 Transcription regulator FadR/GntR, C-terminal CH55_2001 IPR011711 GntR, C-terminal CH55_2001 IPR036388 CH55_2001 CH55_2001 IPR036390 CH55_2001 CH55_2002 IPR002293 Amino acid/polyamine transporter I CH55_2002 IPR004840 Amino acid permease, conserved site CH55_2002 IPR004841 Amino acid permease/ SLC12A domain CH55_2003 IPR031347 CH55_2003 CH55_2004 IPR031347 CH55_2004 CH55_2005 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CH55_2005 IPR036505 CH55_2005 CH55_2006 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CH55_2006 IPR004393 Nicotinate-nucleotide pyrophosphorylase CH55_2006 IPR013785 Aldolase-type TIM barrel CH55_2006 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CH55_2006 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CH55_2006 IPR036068 CH55_2006 CH55_2006 IPR037128 CH55_2006 CH55_2007 IPR012902 Prokaryotic N-terminal methylation site CH55_2008 IPR001482 Type II secretion system protein E CH55_2008 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2009 IPR001992 Type II secretion system conserved site CH55_2009 IPR003004 GspF/PilC family CH55_2009 IPR018076 Type II secretion system F domain CH55_201 IPR003838 Permease FtsX-like CH55_201 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family CH55_201 IPR025857 MacB-like periplasmic core domain CH55_2010 IPR001093 IMP dehydrogenase/GMP reductase CH55_2010 IPR005993 Guanosine monophosphate reductase 1 CH55_2010 IPR013785 Aldolase-type TIM barrel CH55_2010 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CH55_2011 IPR001977 Dephospho-CoA kinase CH55_2011 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2012 IPR009777 Cell division protein ZapD CH55_2012 IPR027462 Z ring-associated protein D, C-terminal domain CH55_2012 IPR036268 CH55_2012 CH55_2013 IPR005584 DNA gyrase inhibitor YacG CH55_2013 IPR013088 Zinc finger, NHR/GATA-type CH55_2014 IPR002686 Transposase IS200-like CH55_2014 IPR036515 CH55_2014 CH55_2015 IPR001584 Integrase, catalytic core CH55_2015 IPR006120 Resolvase, HTH domain CH55_2015 IPR009057 Homeodomain-like CH55_2015 IPR012337 Ribonuclease H-like domain CH55_2016 IPR002611 IstB-like ATP-binding protein CH55_2016 IPR003593 AAA+ ATPase domain CH55_2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_2017 IPR036890 CH55_2017 CH55_2018 IPR004919 Domain of unknown function DUF262 CH55_2018 IPR011089 Domain of unknown function DUF1524 CH55_2019 IPR002104 Integrase, catalytic CH55_2019 IPR010998 Integrase, Lambda-type, N-terminal CH55_2019 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_2019 IPR013762 Integrase-like, catalytic core CH55_2019 IPR025166 Domain of unknown function DUF4102 CH55_2019 IPR038488 CH55_2019 CH55_202 IPR003439 ABC transporter-like CH55_202 IPR003593 AAA+ ATPase domain CH55_202 IPR011924 Lipoprotein releasing system, ATP-binding protein CH55_202 IPR017871 ABC transporter, conserved site CH55_202 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2021 IPR005495 Permease YjgP/YjgQ, predicted CH55_2021 IPR030923 CH55_2021 CH55_2022 IPR005495 Permease YjgP/YjgQ, predicted CH55_2022 IPR030922 CH55_2022 CH55_2023 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CH55_2023 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CH55_2023 IPR011356 Leucine aminopeptidase/peptidase B CH55_2023 IPR023042 Peptidase M17, leucine aminopeptidase CH55_2024 IPR007459 DNA polymerase III chi subunit, HolC CH55_2024 IPR036768 CH55_2024 CH55_2025 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_2025 IPR002300 Aminoacyl-tRNA synthetase, class Ia CH55_2025 IPR002303 Valine-tRNA ligase CH55_2025 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CH55_2025 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CH55_2025 IPR010978 tRNA-binding arm CH55_2025 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CH55_2025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_2025 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CH55_2025 IPR037118 CH55_2025 CH55_2026 IPR000182 GNAT domain CH55_2026 IPR016181 Acyl-CoA N-acyltransferase CH55_2027 IPR009671 Regulator of ribonuclease activity B domain CH55_2027 IPR016716 Regulator of ribonuclease activity B CH55_2027 IPR036701 CH55_2027 CH55_2028 IPR002292 Ornithine/putrescine carbamoyltransferase CH55_2028 IPR006130 Aspartate/ornithine carbamoyltransferase CH55_2028 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CH55_2028 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CH55_2028 IPR024904 Ornithine carbamoyltransferase CH55_2028 IPR036901 CH55_2028 CH55_2029 IPR004375 Conserved hypothetical protein CHP00022 CH55_2029 IPR037012 CH55_2029 CH55_203 IPR003838 Permease FtsX-like CH55_203 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family CH55_203 IPR011926 Lipoprotein releasing system, transmembrane protein LolE CH55_203 IPR025857 MacB-like periplasmic core domain CH55_2030 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_2032 IPR000515 MetI-like domain CH55_2032 IPR035906 CH55_2032 CH55_2033 IPR000515 MetI-like domain CH55_2033 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH55_2033 IPR035906 CH55_2033 CH55_2034 IPR003439 ABC transporter-like CH55_2034 IPR003593 AAA+ ATPase domain CH55_2034 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2035 IPR003439 ABC transporter-like CH55_2035 IPR003593 AAA+ ATPase domain CH55_2035 IPR017871 ABC transporter, conserved site CH55_2035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2036 IPR005144 ATP-cone CH55_2036 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CH55_2036 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CH55_2037 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CH55_2039 IPR000524 Transcription regulator HTH, GntR CH55_2039 IPR011663 UbiC transcription regulator-associated CH55_2039 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF CH55_2039 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CH55_2039 IPR036388 CH55_2039 CH55_2039 IPR036390 CH55_2039 CH55_204 IPR000600 ROK CH55_2040 IPR009609 Phosphonate metabolism PhnG CH55_2041 IPR008772 Bacterial phosphonate metabolism, PhnH CH55_2041 IPR038058 CH55_2041 CH55_2042 IPR008772 Bacterial phosphonate metabolism, PhnH CH55_2042 IPR038058 CH55_2042 CH55_2043 IPR008773 Phosphonate metabolism protein PhnI CH55_2044 IPR010306 Phosphonate metabolism PhnJ CH55_2045 IPR003439 ABC transporter-like CH55_2045 IPR003593 AAA+ ATPase domain CH55_2045 IPR012700 Phosphonate C-P lyase system, PhnK CH55_2045 IPR017871 ABC transporter, conserved site CH55_2045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2046 IPR003439 ABC transporter-like CH55_2046 IPR003593 AAA+ ATPase domain CH55_2046 IPR012701 Phosphonate C-P lyase system, PhnL CH55_2046 IPR017871 ABC transporter, conserved site CH55_2046 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2047 IPR011059 Metal-dependent hydrolase, composite domain CH55_2047 IPR012696 Phosphonate metabolism PhnM CH55_2047 IPR013108 Amidohydrolase 3 CH55_2047 IPR032466 CH55_2047 CH55_2048 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH55_2048 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN CH55_2048 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2049 IPR001279 Beta-lactamase-like CH55_2049 IPR017693 Phosphonate metabolism protein PhnP CH55_2049 IPR036866 CH55_2049 CH55_205 IPR003000 Sirtuin family CH55_205 IPR026591 Sirtuin family, catalytic core small domain CH55_205 IPR027546 Sirtuin, class III CH55_205 IPR029035 DHS-like NAD/FAD-binding domain CH55_2050 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH55_2050 IPR036291 CH55_2050 CH55_2051 IPR011194 Uncharacterised protein family UPF0306 CH55_2051 IPR012349 FMN-binding split barrel CH55_2052 IPR008397 Alginate lyase domain CH55_2052 IPR008929 Chondroitin AC/alginate lyase CH55_2053 IPR003439 ABC transporter-like CH55_2053 IPR003593 AAA+ ATPase domain CH55_2053 IPR008995 Molybdate/tungstate binding, C-terminal CH55_2053 IPR013611 Transport-associated OB, type 2 CH55_2053 IPR017871 ABC transporter, conserved site CH55_2053 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2054 IPR000515 MetI-like domain CH55_2054 IPR035906 CH55_2054 CH55_2055 IPR000515 MetI-like domain CH55_2055 IPR035906 CH55_2055 CH55_2056 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_2057 IPR008397 Alginate lyase domain CH55_2057 IPR008929 Chondroitin AC/alginate lyase CH55_2058 IPR008397 Alginate lyase domain CH55_2058 IPR008929 Chondroitin AC/alginate lyase CH55_2058 IPR012480 Heparinase II/III-like CH55_2059 IPR000305 GIY-YIG nuclease superfamily CH55_2059 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CH55_2059 IPR035901 CH55_2059 CH55_206 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH55_206 IPR002933 Peptidase M20 CH55_206 IPR010161 Peptidase M20B, tripeptide aminopeptidase CH55_206 IPR011650 Peptidase M20, dimerisation domain CH55_206 IPR036264 CH55_206 CH55_2060 IPR000182 GNAT domain CH55_2060 IPR016181 Acyl-CoA N-acyltransferase CH55_2061 IPR003033 SCP2 sterol-binding domain CH55_2061 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CH55_2061 IPR036527 CH55_2061 CH55_2062 IPR001539 Peptidase U32 CH55_2062 IPR036206 CH55_2062 CH55_2063 IPR001539 Peptidase U32 CH55_2064 IPR003423 Outer membrane efflux protein CH55_2064 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CH55_2065 IPR001036 Acriflavin resistance protein CH55_2065 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CH55_2065 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_2066 IPR006143 RND efflux pump, membrane fusion protein CH55_2067 IPR006143 RND efflux pump, membrane fusion protein CH55_2067 IPR039562 CH55_2067 CH55_2068 IPR011251 Luciferase-like domain CH55_2068 IPR019949 Luciferase family oxidoreductase, group 1 CH55_2068 IPR036661 CH55_2068 CH55_207 IPR003347 JmjC domain CH55_2070 IPR036661 CH55_2070 CH55_2071 IPR001387 Cro/C1-type helix-turn-helix domain CH55_2071 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2072 IPR009241 Addiction module killer protein CH55_2073 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CH55_2073 IPR001650 Helicase, C-terminal CH55_2073 IPR005580 DbpA, RNA-binding CH55_2073 IPR011545 DEAD/DEAH box helicase domain CH55_2073 IPR012677 Nucleotide-binding, alpha-beta plait CH55_2073 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_2073 IPR021046 Cold-shock protein, DEAD box A, C-terminal CH55_2073 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2073 IPR028618 ATP-dependent RNA helicase DeaD CH55_2074 IPR011990 Tetratricopeptide-like helical domain CH55_2074 IPR013105 Tetratricopeptide TPR2 CH55_2074 IPR019734 Tetratricopeptide repeat CH55_2074 IPR023605 Lipoprotein NlpI CH55_2075 IPR001247 Exoribonuclease, phosphorolytic domain 1 CH55_2075 IPR003029 Ribosomal protein S1, RNA-binding domain CH55_2075 IPR004087 K Homology domain CH55_2075 IPR004088 K Homology domain, type 1 CH55_2075 IPR012162 Polyribonucleotide nucleotidyltransferase CH55_2075 IPR012340 Nucleic acid-binding, OB-fold CH55_2075 IPR015847 Exoribonuclease, phosphorolytic domain 2 CH55_2075 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CH55_2075 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2075 IPR022967 RNA-binding domain, S1 CH55_2075 IPR027408 PNPase/RNase PH domain CH55_2075 IPR036345 CH55_2075 CH55_2075 IPR036456 CH55_2075 CH55_2075 IPR036612 CH55_2075 CH55_2076 IPR001584 Integrase, catalytic core CH55_2076 IPR012337 Ribonuclease H-like domain CH55_2076 IPR025948 HTH-like domain CH55_2076 IPR036397 CH55_2076 CH55_2077 IPR009057 Homeodomain-like CH55_2077 IPR010921 Trp repressor/replication initiator CH55_2078 IPR001029 Flagellin, D0/D1 domain CH55_2078 IPR001492 Flagellin CH55_2079 IPR001867 Signal transduction response regulator, C-terminal CH55_2079 IPR016032 Signal transduction response regulator, C-terminal effector CH55_2079 IPR036388 CH55_2079 CH55_208 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_208 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_208 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_208 IPR015014 PhoQ Sensor CH55_208 IPR036097 CH55_208 CH55_208 IPR036890 CH55_208 CH55_208 IPR038429 CH55_208 CH55_2082 IPR001029 Flagellin, D0/D1 domain CH55_2082 IPR013384 Flagellar hook-associated protein 3 CH55_2083 IPR001444 Flagellar basal body rod protein, N-terminal CH55_2083 IPR002371 Flagellar hook-associated protein, FlgK CH55_2083 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_2084 IPR019301 Flagellar protein FlgJ, N-terminal CH55_2085 IPR001782 Flagellar P-ring protein CH55_2086 IPR000527 Flagellar L-ring protein CH55_2087 IPR001444 Flagellar basal body rod protein, N-terminal CH55_2087 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_2087 IPR012834 Flagellar basal-body rod FlgG CH55_2087 IPR019776 Flagellar basal body rod protein, conserved site CH55_2087 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CH55_2087 IPR037925 CH55_2087 CH55_2088 IPR001444 Flagellar basal body rod protein, N-terminal CH55_2088 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_2088 IPR012836 Flagellar basal-body rod FlgF CH55_2088 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CH55_2088 IPR037925 CH55_2088 CH55_2089 IPR001444 Flagellar basal body rod protein, N-terminal CH55_2089 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_2089 IPR011491 Flagellar basal body FlaE CH55_2089 IPR019776 Flagellar basal body rod protein, conserved site CH55_2089 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CH55_2089 IPR037058 CH55_2089 CH55_2089 IPR037925 CH55_2089 CH55_209 IPR001789 Signal transduction response regulator, receiver domain CH55_209 IPR001867 Signal transduction response regulator, C-terminal CH55_209 IPR011006 CheY-like superfamily CH55_209 IPR036388 CH55_209 CH55_2090 IPR005648 Flagellar hook capping protein CH55_2090 IPR025963 FlgD Tudor-like domain CH55_2090 IPR025965 FlgD Ig-like domain CH55_2091 IPR001444 Flagellar basal body rod protein, N-terminal CH55_2091 IPR006299 Flagellar basal-body rod protein FlgC CH55_2091 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_2091 IPR019776 Flagellar basal body rod protein, conserved site CH55_2092 IPR001444 Flagellar basal body rod protein, N-terminal CH55_2092 IPR006300 Flagellar basal-body rod protein FlgB CH55_2092 IPR019776 Flagellar basal body rod protein, conserved site CH55_2093 IPR013974 SAF domain CH55_2093 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CH55_2094 IPR007412 Anti-sigma-28 factor, FlgM CH55_2094 IPR031316 CH55_2094 CH55_2094 IPR035890 CH55_2094 CH55_2095 IPR007809 FlgN-like domain CH55_2095 IPR036679 CH55_2095 CH55_2096 IPR012823 Flagellar export FliJ CH55_2097 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_2097 IPR003593 AAA+ ATPase domain CH55_2097 IPR005714 ATPase, type III secretion system, FliI/YscN CH55_2097 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH55_2097 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2098 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CH55_2098 IPR019191 Essential protein Yae1, N-terminal CH55_2099 IPR000090 Flagellar motor switch protein FliG CH55_2099 IPR011002 Flagellar motor switch protein FliG, alpha-helical CH55_2099 IPR023087 CH55_2099 CH55_2099 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CH55_2099 IPR032779 CH55_2099 CH55_21 IPR000620 Drug/metabolite transporter CH55_210 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_210 IPR027385 Outer membrane protein beta-barrel CH55_2100 IPR000067 Flagellar M-ring protein FliF CH55_2100 IPR006182 Secretory protein YscJ/FliF CH55_2100 IPR013556 Flagellar M-ring C-terminal CH55_2101 IPR001624 Flagellar hook-basal body complex protein FliE CH55_2102 IPR002078 RNA polymerase sigma factor 54 interaction domain CH55_2102 IPR002197 DNA binding HTH domain, Fis-type CH55_2102 IPR003593 AAA+ ATPase domain CH55_2102 IPR009057 Homeodomain-like CH55_2102 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH55_2102 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH55_2102 IPR025944 Sigma-54 interaction domain, conserved site CH55_2102 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2103 IPR001543 Surface presentation of antigen (SpoA) CH55_2103 IPR036429 CH55_2103 CH55_2104 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CH55_2104 IPR001543 Surface presentation of antigen (SpoA) CH55_2104 IPR012826 Flagellar motor switch FliN CH55_2104 IPR036429 CH55_2104 CH55_2105 IPR005837 Flagellar transport protein FliP CH55_2105 IPR005838 Type III secretion system inner membrane P protein CH55_2106 IPR002191 Bacterial export protein family 3 CH55_2106 IPR006305 Flagellar biosynthesis protein FliQ CH55_2107 IPR002010 Type III secretion system inner membrane R protein CH55_2108 IPR006135 Type III secretion system substrate exporter CH55_2108 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB CH55_2108 IPR029025 Type III secretion system substrate exporter, C-terminal CH55_2109 IPR001712 Type III secretion system FHIPEP CH55_2109 IPR025505 FHIPEP conserved site CH55_211 IPR000362 Fumarate lyase family CH55_211 IPR004769 Adenylosuccinate lyase CH55_211 IPR008948 L-Aspartase-like CH55_211 IPR013539 Adenylosuccinate lyase PurB, C-terminal CH55_211 IPR020557 Fumarate lyase, conserved site CH55_211 IPR022761 Fumarate lyase, N-terminal CH55_211 IPR024083 Fumarase/histidase, N-terminal CH55_2110 IPR021326 Protein of unknown function DUF2931 CH55_2112 IPR002491 ABC transporter periplasmic binding domain CH55_2113 IPR000259 Fimbrial-type adhesion domain CH55_2113 IPR008966 Adhesion domain CH55_2113 IPR036937 CH55_2113 CH55_2114 IPR001829 Pili assembly chaperone, bacterial CH55_2114 IPR008962 PapD-like CH55_2114 IPR013783 Immunoglobulin-like fold CH55_2114 IPR016147 PapD, N-terminal, bacterial CH55_2114 IPR016148 Pili assembly chaperone, C-terminal domain CH55_2114 IPR018046 Pili assembly chaperone, conserved site CH55_2114 IPR036316 CH55_2114 CH55_2115 IPR000015 Outer membrane usher protein CH55_2115 IPR025885 PapC, N-terminal domain CH55_2115 IPR025949 PapC-like, C-terminal domain CH55_2115 IPR037224 CH55_2115 CH55_2116 IPR002686 Transposase IS200-like CH55_2116 IPR036515 CH55_2116 CH55_2117 IPR000045 Prepilin type IV endopeptidase, peptidase domain CH55_2119 IPR032789 CH55_2119 CH55_212 IPR007451 Uncharacterised protein family UPF0274 CH55_212 IPR035932 CH55_212 CH55_2120 IPR004846 Type II/III secretion system CH55_2122 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2123 IPR001482 Type II secretion system protein E CH55_2123 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2124 IPR018076 Type II secretion system F domain CH55_2125 IPR018076 Type II secretion system F domain CH55_2126 IPR011990 Tetratricopeptide-like helical domain CH55_2127 IPR012495 TadE-like CH55_2128 IPR031582 CH55_2128 CH55_2129 IPR036465 CH55_2129 CH55_213 IPR004506 tRNA-specific 2-thiouridylase CH55_213 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_213 IPR023382 Adenine nucleotide alpha hydrolase-like domains CH55_2130 IPR003400 Biopolymer transport protein ExbD/TolR CH55_2130 IPR014170 TonB system transport protein ExbD type-1 CH55_2132 IPR002898 MotA/TolQ/ExbB proton channel CH55_2132 IPR014164 TonB-system energizer ExbB type-1 CH55_2133 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH55_2133 IPR006233 Cystathionine beta-lyase, bacterial CH55_2133 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_2133 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_2133 IPR015424 Pyridoxal phosphate-dependent transferase CH55_2134 IPR032816 CH55_2134 CH55_2135 IPR009057 Homeodomain-like CH55_2135 IPR009594 Transcription regulator HTH, AraC, N-terminal CH55_2135 IPR018060 DNA binding HTH domain, AraC-type CH55_2136 IPR001670 Alcohol dehydrogenase, iron-type CH55_2136 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH55_2137 IPR018170 Aldo/keto reductase, conserved site CH55_2137 IPR020471 Aldo/keto reductase subgroup CH55_2137 IPR023210 NADP-dependent oxidoreductase domain CH55_2137 IPR036812 CH55_2137 CH55_2138 IPR024560 Uncharacterised protein family UPF0313, C-terminal CH55_2139 IPR007197 Radical SAM CH55_2139 IPR013704 Uncharacterised protein family UPF0313, N-terminal CH55_2139 IPR020612 Methylthiotransferase, conserved site CH55_2139 IPR022946 Uncharacterised protein family UPF0313 CH55_2139 IPR023404 Radical SAM, alpha/beta horseshoe CH55_214 IPR000086 NUDIX hydrolase domain CH55_214 IPR015797 NUDIX hydrolase domain-like CH55_214 IPR020084 NUDIX hydrolase, conserved site CH55_214 IPR020476 NUDIX hydrolase CH55_2140 IPR008972 Cupredoxin CH55_2140 IPR011706 Multicopper oxidase, type 2 CH55_2140 IPR011707 Multicopper oxidase, type 3 CH55_2140 IPR026589 Cell division protein FtsP CH55_2141 IPR002123 Phospholipid/glycerol acyltransferase CH55_2141 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CH55_2142 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CH55_2142 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CH55_2142 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CH55_2142 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CH55_2142 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CH55_2142 IPR013760 DNA topoisomerase, type IIA-like domain CH55_2142 IPR035516 CH55_2142 CH55_2143 IPR003680 Flavodoxin-like fold CH55_2143 IPR029039 Flavoprotein-like CH55_2144 IPR000847 Transcription regulator HTH, LysR CH55_2144 IPR005119 LysR, substrate-binding CH55_2144 IPR036388 CH55_2144 CH55_2144 IPR036390 CH55_2144 CH55_2145 IPR001241 DNA topoisomerase, type IIA CH55_2145 IPR002288 DNA gyrase B subunit, C-terminal CH55_2145 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_2145 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CH55_2145 IPR006171 Toprim domain CH55_2145 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CH55_2145 IPR013759 DNA topoisomerase, type IIA, central domain CH55_2145 IPR013760 DNA topoisomerase, type IIA-like domain CH55_2145 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2145 IPR018522 DNA topoisomerase, type IIA, conserved site CH55_2145 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2145 IPR036890 CH55_2145 CH55_2146 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CH55_2146 IPR029058 Alpha/Beta hydrolase fold CH55_2147 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CH55_2147 IPR013622 Calcineurin-like phosphoesterase C-terminal CH55_2147 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CH55_2147 IPR029052 Metallo-dependent phosphatase-like CH55_2148 IPR009659 Protein of unknown function DUF1249 CH55_2149 IPR000086 NUDIX hydrolase domain CH55_2149 IPR004385 Nucleoside diphosphate pyrophosphatase CH55_2149 IPR015797 NUDIX hydrolase domain-like CH55_2149 IPR020084 NUDIX hydrolase, conserved site CH55_215 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CH55_215 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CH55_215 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CH55_215 IPR020103 Pseudouridine synthase, catalytic domain CH55_2150 IPR003423 Outer membrane efflux protein CH55_2150 IPR010130 Type I secretion outer membrane protein, TolC CH55_2152 IPR009576 Biofilm formation YgiB CH55_2153 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CH55_2153 IPR016185 Pre-ATP-grasp domain CH55_2154 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CH55_2154 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type CH55_2155 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CH55_2155 IPR017945 DHBP synthase RibB-like alpha/beta domain CH55_2157 IPR007475 Membrane fusogenic activity CH55_2158 IPR002293 Amino acid/polyamine transporter I CH55_2159 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH55_2159 IPR004821 Cytidyltransferase-like domain CH55_2159 IPR011611 Carbohydrate kinase PfkB CH55_2159 IPR011913 RfaE bifunctional protein, domain I CH55_2159 IPR011914 RfaE bifunctional protein, domain II CH55_2159 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_2159 IPR023030 Bifunctional protein HldE CH55_2159 IPR029056 Ribokinase-like CH55_216 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CH55_216 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CH55_216 IPR024084 Isopropylmalate dehydrogenase-like domain CH55_2160 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CH55_2160 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CH55_2160 IPR023057 Glutamate-ammonia-ligase adenylyltransferase CH55_2161 IPR023577 CYTH-like domain CH55_2161 IPR033469 CH55_2161 CH55_2162 IPR003646 SH3-like domain, bacterial-type CH55_2162 IPR016476 SH3 domain protein CH55_2163 IPR002646 Poly A polymerase, head domain CH55_2163 IPR003607 HD/PDEase domain CH55_2163 IPR006674 HD domain CH55_2163 IPR012006 tRNA nucleotidyltransferase, proteobacteria CH55_2163 IPR032828 CH55_2163 CH55_2164 IPR003824 Undecaprenyl-diphosphatase UppP CH55_2165 IPR006156 Dihydroneopterin aldolase CH55_2165 IPR006157 Dihydroneopterin aldolase/epimerase domain CH55_2166 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CH55_2167 IPR000905 Gcp-like domain CH55_2167 IPR017860 Peptidase M22, conserved site CH55_2167 IPR017861 Kae1/YgjD family CH55_2167 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CH55_2168 IPR001911 Ribosomal protein S21 CH55_2168 IPR018278 Ribosomal protein S21, conserved site CH55_2168 IPR038380 CH55_2168 CH55_2169 IPR002694 Zinc finger, CHC2-type CH55_2169 IPR006171 Toprim domain CH55_2169 IPR006295 DNA primase, DnaG CH55_2169 IPR013173 DNA primase DnaG, DnaB-binding domain CH55_2169 IPR013264 DNA primase, catalytic core, N-terminal CH55_2169 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CH55_2169 IPR019475 DNA primase, DnaB-helicase binding domain CH55_2169 IPR030846 CH55_2169 CH55_2169 IPR036977 CH55_2169 CH55_2169 IPR037068 CH55_2169 CH55_217 IPR000843 Transcription regulator HTH, LacI CH55_217 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH55_217 IPR010982 Lambda repressor-like, DNA-binding domain CH55_217 IPR028082 Periplasmic binding protein-like I CH55_2170 IPR000943 RNA polymerase sigma-70 CH55_2170 IPR007127 RNA polymerase sigma factor 70, region 1.1 CH55_2170 IPR007624 RNA polymerase sigma-70 region 3 CH55_2170 IPR007627 RNA polymerase sigma-70 region 2 CH55_2170 IPR007630 RNA polymerase sigma-70 region 4 CH55_2170 IPR007631 RNA polymerase sigma factor 70, non-essential domain CH55_2170 IPR009042 RNA polymerase sigma-70 region 1.2 CH55_2170 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CH55_2170 IPR013324 RNA polymerase sigma factor, region 3/4 CH55_2170 IPR013325 RNA polymerase sigma factor, region 2 CH55_2170 IPR014284 RNA polymerase sigma-70 like domain CH55_2170 IPR028630 RNA polymerase sigma factor RpoD CH55_2170 IPR036388 CH55_2170 CH55_2173 IPR005335 Terminase small subunit CH55_2173 IPR038713 CH55_2173 CH55_2176 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type CH55_2178 IPR003812 Fido domain CH55_2178 IPR036597 CH55_2178 CH55_2180 IPR036597 CH55_2180 CH55_2181 IPR000847 Transcription regulator HTH, LysR CH55_2181 IPR005119 LysR, substrate-binding CH55_2181 IPR036388 CH55_2181 CH55_2181 IPR036390 CH55_2181 CH55_2182 IPR036249 CH55_2182 CH55_2183 IPR011008 Dimeric alpha-beta barrel CH55_2183 IPR014910 Mono-oxygenase, YdhR CH55_2184 IPR006175 YjgF/Yer057p/UK114 family CH55_2184 IPR035959 CH55_2184 CH55_2185 IPR006056 Enamine/imine deaminase YjgF-like CH55_2185 IPR006175 YjgF/Yer057p/UK114 family CH55_2185 IPR019897 YjgF-like protein, conserved site CH55_2185 IPR035959 CH55_2185 CH55_2186 IPR013559 YheO-like CH55_2187 IPR019587 Polyketide cyclase/dehydrase CH55_2187 IPR023393 START-like domain CH55_2189 IPR018461 Na+/H+ antiporter, NhaC-like CH55_219 IPR000014 PAS domain CH55_219 IPR001610 PAC motif CH55_219 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_219 IPR004090 Chemotaxis methyl-accepting receptor CH55_219 IPR013655 PAS fold-3 CH55_219 IPR035965 CH55_219 CH55_2190 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CH55_2190 IPR004839 Aminotransferase, class I/classII CH55_2190 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_2190 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_2190 IPR015424 Pyridoxal phosphate-dependent transferase CH55_2192 IPR031381 CH55_2192 CH55_2193 IPR039562 CH55_2193 CH55_2194 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CH55_2195 IPR003423 Outer membrane efflux protein CH55_2195 IPR028351 Cyclolysin transport protein CyaE CH55_2196 IPR001764 Glycoside hydrolase, family 3, N-terminal CH55_2196 IPR002772 Glycoside hydrolase family 3 C-terminal domain CH55_2196 IPR013783 Immunoglobulin-like fold CH55_2196 IPR017853 Glycoside hydrolase, superfamily CH55_2196 IPR026891 Fibronectin type III-like domain CH55_2196 IPR036881 CH55_2196 CH55_2196 IPR036962 CH55_2196 CH55_2198 IPR000515 MetI-like domain CH55_2198 IPR035906 CH55_2198 CH55_2199 IPR000515 MetI-like domain CH55_2199 IPR035906 CH55_2199 CH55_22 IPR003313 AraC-type arabinose-binding/dimerisation domain CH55_22 IPR009057 Homeodomain-like CH55_22 IPR011051 RmlC-like cupin domain CH55_22 IPR014710 RmlC-like jelly roll fold CH55_22 IPR018060 DNA binding HTH domain, AraC-type CH55_22 IPR018062 HTH domain AraC-type, conserved site CH55_22 IPR020449 Transcription regulator HTH, AraC- type CH55_220 IPR008030 NmrA-like domain CH55_220 IPR036291 CH55_220 CH55_2200 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_2201 IPR000843 Transcription regulator HTH, LacI CH55_2201 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2201 IPR028082 Periplasmic binding protein-like I CH55_2202 IPR008928 Six-hairpin glycosidase-like CH55_2202 IPR012341 Six-hairpin glycosidase CH55_2203 IPR003439 ABC transporter-like CH55_2203 IPR003593 AAA+ ATPase domain CH55_2203 IPR008995 Molybdate/tungstate binding, C-terminal CH55_2203 IPR013611 Transport-associated OB, type 2 CH55_2203 IPR017871 ABC transporter, conserved site CH55_2203 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2204 IPR019282 Domain of unknown function DUF2329 CH55_2205 IPR025737 MetA-pathway of phenol degradation, putative CH55_2206 IPR005546 Autotransporter beta-domain CH55_2206 IPR036709 CH55_2206 CH55_2208 IPR028952 Immunity protein 38 CH55_221 IPR002577 Helix-turn-helix, HxlR type CH55_221 IPR036388 CH55_221 CH55_221 IPR036390 CH55_221 CH55_2212 IPR006914 VENN motif-containing domain CH55_2212 IPR025157 Haemagluttinin repeat CH55_2213 IPR008619 Filamentous haemagglutinin repeat CH55_2213 IPR008638 Filamentous haemagglutinin, N-terminal CH55_2213 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH55_2213 IPR011050 Pectin lyase fold/virulence factor CH55_2213 IPR012334 Pectin lyase fold CH55_2213 IPR024973 ESPR domain CH55_2214 IPR005565 Haemolysin activator HlyB CH55_2214 IPR013686 Polypeptide-transport-associated, ShlB-type CH55_2214 IPR027282 Two partner secretion pathway transporter CH55_2214 IPR035251 CH55_2214 CH55_2215 IPR002035 von Willebrand factor, type A CH55_2215 IPR011392 Tellurite resistance, TerY CH55_2215 IPR036465 CH55_2215 CH55_2216 IPR003325 TerD domain CH55_2217 IPR002035 von Willebrand factor, type A CH55_2217 IPR011392 Tellurite resistance, TerY CH55_2217 IPR036465 CH55_2217 CH55_2218 IPR002035 von Willebrand factor, type A CH55_2218 IPR028274 TerY-C metal binding domain CH55_2218 IPR036465 CH55_2218 CH55_2219 IPR036457 CH55_2219 CH55_2220 IPR000719 Protein kinase domain CH55_2220 IPR008266 Tyrosine-protein kinase, active site CH55_2220 IPR011009 Protein kinase-like domain CH55_2221 IPR005325 Protein of unknown function DUF308, membrane CH55_2222 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CH55_2222 IPR013785 Aldolase-type TIM barrel CH55_2222 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_2222 IPR036188 CH55_2222 CH55_2223 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_2223 IPR007848 Methyltransferase small domain CH55_2223 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD CH55_2223 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2224 IPR004899 Pertactin, central region CH55_2224 IPR006315 Outer membrane autotransporter barrel CH55_2224 IPR011050 Pectin lyase fold/virulence factor CH55_2224 IPR012332 P22 tailspike C-terminal domain-like CH55_2225 IPR005546 Autotransporter beta-domain CH55_2225 IPR006315 Outer membrane autotransporter barrel CH55_2225 IPR036709 CH55_2225 CH55_2226 IPR002725 Protein of unknown function DUF45 CH55_2227 IPR000683 Oxidoreductase, N-terminal CH55_2227 IPR036291 CH55_2227 CH55_2228 IPR001991 Sodium:dicarboxylate symporter CH55_2228 IPR023025 Serine/threonine transporter SstT CH55_2228 IPR036458 CH55_2228 CH55_223 IPR000560 Histidine phosphatase superfamily, clade-2 CH55_223 IPR029033 Histidine phosphatase superfamily CH55_223 IPR033379 CH55_223 CH55_2230 IPR002686 Transposase IS200-like CH55_2230 IPR036515 CH55_2230 CH55_2231 IPR022231 Protein of unknown function DUF3757 CH55_2232 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CH55_2232 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CH55_2232 IPR029052 Metallo-dependent phosphatase-like CH55_2233 IPR007474 ApaG domain CH55_2233 IPR023065 Uncharacterised protein family ApaG CH55_2233 IPR036767 CH55_2233 CH55_2234 IPR001737 Ribosomal RNA adenine methylase transferase CH55_2234 IPR011530 Ribosomal RNA adenine dimethylase CH55_2234 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CH55_2234 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CH55_2234 IPR023165 rRNA adenine dimethylase-like CH55_2234 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2235 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA CH55_2235 IPR037510 CH55_2235 CH55_2236 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CH55_2236 IPR015391 SurA N-terminal CH55_2236 IPR023034 Peptidyl-prolyl isomerase SurA CH55_2236 IPR027304 Trigger factor/SurA domain CH55_2237 IPR005653 Organic solvent tolerance-like, N-terminal CH55_2237 IPR007543 Organic solvent tolerance protein, C-terminal CH55_2237 IPR020889 Lipopolysaccharide assembly, LptD CH55_2238 IPR001623 DnaJ domain CH55_2238 IPR007791 Heat shock protein DnaJ-like protein DjlA CH55_2238 IPR023749 DnaJ-like protein DjlA CH55_2238 IPR029024 TerB-like CH55_2238 IPR036869 CH55_2238 CH55_2239 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CH55_2239 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH55_2239 IPR020103 Pseudouridine synthase, catalytic domain CH55_224 IPR017704 Putative selenium-binding protein YdfZ CH55_2240 IPR018754 Protein of unknown function DUF2285 CH55_2241 IPR010657 ImpA, N-terminal CH55_2242 IPR008312 Uncharacterised conserved protein UCP028301 CH55_2243 IPR010269 Protein of unknown function DUF877 CH55_2244 IPR008514 Type VI secretion system effector, Hcp CH55_2244 IPR036624 CH55_2244 CH55_2245 IPR007048 GpW/Gp25/anti-adapter protein IraD CH55_2246 IPR010272 Type VI secretion system, VCA0110 CH55_2247 IPR010732 Protein of unknown function DUF1305 CH55_2248 IPR001270 ClpA/B family CH55_2248 IPR003593 AAA+ ATPase domain CH55_2248 IPR003959 ATPase, AAA-type, core CH55_2248 IPR004176 Clp, N-terminal CH55_2248 IPR017729 Type VI secretion system, ATPase ClpV1 CH55_2248 IPR019489 Clp ATPase, C-terminal CH55_2248 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2248 IPR036628 CH55_2248 CH55_2249 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH55_2249 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH55_2249 IPR037026 CH55_2249 CH55_225 IPR021266 Kdo hydroxylase CH55_2250 IPR001646 Pentapeptide repeat CH55_2250 IPR018683 Domain of unknown function DUF2169 CH55_2251 IPR001646 Pentapeptide repeat CH55_2252 IPR021927 Protein of unknown function DUF3540 CH55_2253 IPR025425 Domain of unknown function DUF4150 CH55_2254 IPR017734 Type VI secretion system, lipoprotein SciN CH55_2254 IPR038706 CH55_2254 CH55_2255 IPR010263 Protein of unknown function DUF876 CH55_2256 IPR017732 Type IV / VI secretion system, DotU CH55_2256 IPR038522 CH55_2256 CH55_2257 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_2257 IPR017732 Type IV / VI secretion system, DotU CH55_2257 IPR036737 CH55_2257 CH55_2257 IPR038522 CH55_2257 CH55_2258 IPR009612 ImcF-related CH55_2258 IPR010623 Domain of unknown function DUF1215 CH55_2258 IPR017731 Type VI secretion system, IcmF CH55_2258 IPR025743 ImcF-related, N-terminal domain CH55_2258 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_226 IPR000485 AsnC-type HTH domain CH55_226 IPR011008 Dimeric alpha-beta barrel CH55_226 IPR019887 Transcription regulator AsnC-type, C-terminal CH55_226 IPR019888 Transcription regulator AsnC-type CH55_226 IPR036388 CH55_226 CH55_226 IPR036390 CH55_226 CH55_2260 IPR000330 SNF2-related CH55_2260 IPR001650 Helicase, C-terminal CH55_2260 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_2260 IPR022737 RNA polymerase recycling, bacterial, C-terminal CH55_2260 IPR023949 RNA polymerase-associated protein RapA CH55_2260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2260 IPR038718 CH55_2260 CH55_2261 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain CH55_2261 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain CH55_2261 IPR006172 DNA-directed DNA polymerase, family B CH55_2261 IPR012337 Ribonuclease H-like domain CH55_2261 IPR017964 DNA-directed DNA polymerase, family B, conserved site CH55_2261 IPR023211 DNA polymerase, palm domain CH55_2261 IPR036397 CH55_2261 CH55_2262 IPR032816 CH55_2262 CH55_2263 IPR003439 ABC transporter-like CH55_2263 IPR003593 AAA+ ATPase domain CH55_2263 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ CH55_2263 IPR017871 ABC transporter, conserved site CH55_2263 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2264 IPR000515 MetI-like domain CH55_2264 IPR005947 Thiamine ABC transporter, permease protein CH55_2264 IPR035906 CH55_2264 CH55_2265 IPR005948 Thiamine ABC transporter periplasmic binding protein CH55_2265 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein CH55_2267 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_2267 IPR023767 Transcriptional regulator SgrR CH55_2267 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CH55_2267 IPR036390 CH55_2267 CH55_2268 IPR004750 Sugar efflux CH55_2268 IPR011701 Major facilitator superfamily CH55_2268 IPR036259 CH55_2268 CH55_2269 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CH55_2269 IPR004431 3-isopropylmalate dehydratase, small subunit CH55_2269 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CH55_227 IPR019713 Inner membrane protein YlaC CH55_2270 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CH55_2270 IPR004430 3-isopropylmalate dehydratase, large subunit CH55_2270 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CH55_2270 IPR018136 Aconitase family, 4Fe-4S cluster binding site CH55_2270 IPR036008 CH55_2270 CH55_2271 IPR004429 Isopropylmalate dehydrogenase CH55_2271 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CH55_2271 IPR024084 Isopropylmalate dehydrogenase-like domain CH55_2272 IPR000891 Pyruvate carboxyltransferase CH55_2272 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CH55_2272 IPR005671 2-isopropylmalate synthase, bacterial-type CH55_2272 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CH55_2272 IPR013785 Aldolase-type TIM barrel CH55_2272 IPR036230 CH55_2272 CH55_2273 IPR002686 Transposase IS200-like CH55_2273 IPR036515 CH55_2273 CH55_2274 IPR002686 Transposase IS200-like CH55_2274 IPR036515 CH55_2274 CH55_2276 IPR000847 Transcription regulator HTH, LysR CH55_2276 IPR005119 LysR, substrate-binding CH55_2276 IPR036388 CH55_2276 CH55_2276 IPR036390 CH55_2276 CH55_2277 IPR000873 AMP-dependent synthetase/ligase CH55_2277 IPR020845 AMP-binding, conserved site CH55_2278 IPR000399 TPP-binding enzyme, conserved site CH55_2278 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH55_2278 IPR012000 Thiamine pyrophosphate enzyme, central domain CH55_2278 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH55_2278 IPR012846 Acetolactate synthase, large subunit, biosynthetic CH55_2278 IPR029035 DHS-like NAD/FAD-binding domain CH55_2278 IPR029061 Thiamin diphosphate-binding fold CH55_2279 IPR002912 ACT domain CH55_2279 IPR004789 Acetolactate synthase, small subunit CH55_2279 IPR019455 Acetolactate synthase, small subunit, C-terminal CH55_2279 IPR027271 CH55_2279 CH55_228 IPR011032 GroES (chaperonin 10)-like CH55_228 IPR013149 Alcohol dehydrogenase, C-terminal CH55_228 IPR013154 Alcohol dehydrogenase GroES-like CH55_228 IPR014189 Quinone oxidoreductase PIG3 CH55_228 IPR020843 Polyketide synthase, enoylreductase CH55_228 IPR036291 CH55_228 CH55_2280 IPR002686 Transposase IS200-like CH55_2280 IPR036515 CH55_2280 CH55_2281 IPR000843 Transcription regulator HTH, LacI CH55_2281 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH55_2281 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2281 IPR012781 D-fructose-responsive transcription factor CH55_2281 IPR028082 Periplasmic binding protein-like I CH55_2282 IPR010574 L-alanine exporter AlaE CH55_2283 IPR003444 MraZ CH55_2283 IPR020603 MraZ domain CH55_2283 IPR037914 CH55_2283 CH55_2283 IPR038619 CH55_2283 CH55_2284 IPR002903 Ribosomal RNA small subunit methyltransferase H CH55_2284 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain CH55_2284 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2285 IPR011922 Cell division protein FtsL CH55_2286 IPR001460 Penicillin-binding protein, transpeptidase CH55_2286 IPR005311 Penicillin-binding protein, dimerisation domain CH55_2286 IPR012338 Beta-lactamase/transpeptidase-like CH55_2286 IPR036138 CH55_2286 CH55_2286 IPR037532 CH55_2286 CH55_2287 IPR000713 Mur ligase, N-terminal CH55_2287 IPR004101 Mur ligase, C-terminal CH55_2287 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CH55_2287 IPR013221 Mur ligase, central CH55_2287 IPR035911 CH55_2287 CH55_2287 IPR036565 CH55_2287 CH55_2287 IPR036615 CH55_2287 CH55_2288 IPR000713 Mur ligase, N-terminal CH55_2288 IPR004101 Mur ligase, C-terminal CH55_2288 IPR005863 UDP-MurNAc-pentapeptide synthetase CH55_2288 IPR013221 Mur ligase, central CH55_2288 IPR035911 CH55_2288 CH55_2288 IPR036565 CH55_2288 CH55_2288 IPR036615 CH55_2288 CH55_2289 IPR000715 Glycosyl transferase, family 4 CH55_2289 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CH55_2289 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CH55_229 IPR004199 Beta galactosidase small chain/ domain 5 CH55_229 IPR006101 Glycoside hydrolase, family 2 CH55_229 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CH55_229 IPR006103 Glycoside hydrolase, family 2, TIM barrel CH55_229 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CH55_229 IPR008979 Galactose-binding domain-like CH55_229 IPR011013 Galactose mutarotase-like domain CH55_229 IPR013783 Immunoglobulin-like fold CH55_229 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CH55_229 IPR017853 Glycoside hydrolase, superfamily CH55_229 IPR023230 Glycoside hydrolase, family 2, conserved site CH55_229 IPR023232 Glycoside hydrolase, family 2, active site CH55_229 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase CH55_229 IPR032312 CH55_229 CH55_229 IPR036156 CH55_229 CH55_2290 IPR004101 Mur ligase, C-terminal CH55_2290 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CH55_2290 IPR013221 Mur ligase, central CH55_2290 IPR036565 CH55_2290 CH55_2290 IPR036615 CH55_2290 CH55_2291 IPR001182 Cell cycle protein FtsW/RodA CH55_2291 IPR013437 Cell division protein FtsW CH55_2291 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CH55_2292 IPR004276 Glycosyl transferase, family 28 CH55_2292 IPR006009 N-acetylglucosaminyltransferase, MurG CH55_2292 IPR007235 Glycosyl transferase, family 28, C-terminal CH55_2293 IPR000713 Mur ligase, N-terminal CH55_2293 IPR004101 Mur ligase, C-terminal CH55_2293 IPR005758 UDP-N-acetylmuramate-alanine ligase CH55_2293 IPR013221 Mur ligase, central CH55_2293 IPR036565 CH55_2293 CH55_2293 IPR036615 CH55_2293 CH55_2294 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CH55_2294 IPR005905 D-alanine--D-alanine ligase CH55_2294 IPR011095 D-alanine--D-alanine ligase, C-terminal CH55_2294 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CH55_2294 IPR013815 ATP-grasp fold, subdomain 1 CH55_2294 IPR016185 Pre-ATP-grasp domain CH55_2295 IPR005548 Cell division protein FtsQ/DivIB CH55_2295 IPR013685 Polypeptide-transport-associated, FtsQ-type CH55_2295 IPR026579 Cell division protein FtsQ CH55_2296 IPR003494 SHS2 domain inserted in FtsA CH55_2296 IPR020823 Cell division protein FtsA CH55_2297 IPR000158 Cell division protein FtsZ CH55_2297 IPR003008 Tubulin/FtsZ, GTPase domain CH55_2297 IPR008280 Tubulin/FtsZ, C-terminal CH55_2297 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CH55_2297 IPR020805 Cell division protein FtsZ, conserved site CH55_2297 IPR024757 Cell division protein FtsZ, C-terminal CH55_2297 IPR036525 CH55_2297 CH55_2298 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CH55_2298 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CH55_2298 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CH55_2298 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2299 IPR007922 Protein of unknown function DUF721/UPF0232 CH55_23 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH55_23 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH55_23 IPR020921 Erythronate-4-phosphate dehydrogenase CH55_23 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain CH55_23 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH55_23 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH55_23 IPR036291 CH55_23 CH55_23 IPR038251 CH55_23 CH55_230 IPR002059 Cold-shock protein, DNA-binding CH55_230 IPR011129 Cold shock protein CH55_230 IPR012156 Cold shock, CspA CH55_230 IPR012340 Nucleic acid-binding, OB-fold CH55_230 IPR019844 Cold-shock conserved site CH55_2300 IPR009502 Secretion monitor CH55_2301 IPR000185 Protein translocase subunit SecA CH55_2301 IPR004027 SEC-C motif CH55_2301 IPR011115 SecA DEAD-like, N-terminal CH55_2301 IPR011116 SecA Wing/Scaffold CH55_2301 IPR011130 SecA preprotein, cross-linking domain CH55_2301 IPR020937 SecA conserved site CH55_2301 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2301 IPR036266 CH55_2301 CH55_2301 IPR036670 CH55_2301 CH55_2302 IPR000086 NUDIX hydrolase domain CH55_2302 IPR003561 Mutator MutT CH55_2302 IPR015797 NUDIX hydrolase domain-like CH55_2302 IPR020084 NUDIX hydrolase, conserved site CH55_2302 IPR020476 NUDIX hydrolase CH55_2303 IPR001270 ClpA/B family CH55_2303 IPR002611 IstB-like ATP-binding protein CH55_2303 IPR003593 AAA+ ATPase domain CH55_2303 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2303 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_2304 IPR001584 Integrase, catalytic core CH55_2304 IPR006120 Resolvase, HTH domain CH55_2304 IPR009057 Homeodomain-like CH55_2304 IPR012337 Ribonuclease H-like domain CH55_2306 IPR032808 CH55_2306 CH55_2307 IPR025612 YqjK-like protein CH55_2308 IPR009937 Protein of unknown function DUF1469 CH55_2309 IPR010279 Protein of unknown function DUF883, ElaB CH55_231 IPR019717 Dextransucrase DSRB CH55_2310 IPR009468 Protein of unknown function DUF1090 CH55_2311 IPR026574 Modulator protein MzrA CH55_2311 IPR027398 SecD export protein N-terminal TM domain CH55_2312 IPR032816 CH55_2312 CH55_2314 IPR000524 Transcription regulator HTH, GntR CH55_2314 IPR008920 Transcription regulator FadR/GntR, C-terminal CH55_2314 IPR011711 GntR, C-terminal CH55_2314 IPR036388 CH55_2314 CH55_2314 IPR036390 CH55_2314 CH55_2315 IPR000849 Sugar phosphate transporter CH55_2315 IPR011701 Major facilitator superfamily CH55_2315 IPR036259 CH55_2315 CH55_2316 IPR003766 Uronate isomerase CH55_2316 IPR032466 CH55_2316 CH55_2317 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_2317 IPR013118 Mannitol dehydrogenase, C-terminal CH55_2317 IPR013131 Mannitol dehydrogenase, N-terminal CH55_2317 IPR013328 Dehydrogenase, multihelical CH55_2317 IPR023668 Altronate oxidoreductase CH55_2317 IPR036291 CH55_2317 CH55_2318 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal CH55_2318 IPR013974 SAF domain CH55_2319 IPR019629 Uncharacterised protein family HI1736/YgjV CH55_2319 IPR026267 Inner membrane protein YgjV CH55_232 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_2320 IPR002686 Transposase IS200-like CH55_2320 IPR036515 CH55_2320 CH55_2321 IPR001796 Dihydrofolate reductase domain CH55_2321 IPR012259 Dihydrofolate reductase CH55_2321 IPR017925 Dihydrofolate reductase conserved site CH55_2321 IPR024072 Dihydrofolate reductase-like domain CH55_2322 IPR024528 Domain of unknown function DUF3815 CH55_2323 IPR010619 Domain of unknown function DUF1212 CH55_2324 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CH55_2325 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CH55_2325 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CH55_2325 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CH55_2325 IPR006275 Carbamoyl-phosphate synthase, large subunit CH55_2325 IPR011607 Methylglyoxal synthase-like domain CH55_2325 IPR016185 Pre-ATP-grasp domain CH55_2325 IPR036897 CH55_2325 CH55_2325 IPR036914 CH55_2325 CH55_2326 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain CH55_2326 IPR006274 Carbamoyl-phosphate synthase, small subunit CH55_2326 IPR017926 Glutamine amidotransferase CH55_2326 IPR029062 Class I glutamine amidotransferase-like CH55_2326 IPR036480 CH55_2326 CH55_2327 IPR000846 Dihydrodipicolinate reductase, N-terminal CH55_2327 IPR022663 Dihydrodipicolinate reductase, C-terminal CH55_2327 IPR022664 Dihydrodipicolinate reductase, conserved site CH55_2327 IPR023940 Dihydrodipicolinate reductase, bacterial CH55_2327 IPR036291 CH55_2327 CH55_2328 IPR002686 Transposase IS200-like CH55_2328 IPR036515 CH55_2328 CH55_2329 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CH55_233 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding CH55_233 IPR003660 HAMP linker domain CH55_233 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_233 IPR004090 Chemotaxis methyl-accepting receptor CH55_233 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH55_233 IPR035440 CH55_233 CH55_2330 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CH55_2331 IPR001872 Peptidase A8, signal peptidase II CH55_2332 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_2332 IPR002300 Aminoacyl-tRNA synthetase, class Ia CH55_2332 IPR002301 Isoleucine-tRNA ligase CH55_2332 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CH55_2332 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CH55_2332 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase CH55_2332 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CH55_2332 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_2332 IPR023585 Isoleucine-tRNA ligase, type 1 CH55_2333 IPR002606 Riboflavin kinase, bacterial CH55_2333 IPR004821 Cytidyltransferase-like domain CH55_2333 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_2333 IPR015864 FAD synthetase CH55_2333 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CH55_2333 IPR023465 Riboflavin kinase domain CH55_2334 IPR002583 Ribosomal protein S20 CH55_2334 IPR036510 CH55_2334 CH55_2335 IPR000847 Transcription regulator HTH, LysR CH55_2335 IPR005119 LysR, substrate-binding CH55_2335 IPR036388 CH55_2335 CH55_2335 IPR036390 CH55_2335 CH55_2336 IPR004670 Na+/H+ antiporter NhaA CH55_2336 IPR023171 Na/H antiporter domain CH55_2337 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CH55_2337 IPR001623 DnaJ domain CH55_2337 IPR002939 Chaperone DnaJ, C-terminal CH55_2337 IPR008971 HSP40/DnaJ peptide-binding CH55_2337 IPR012724 Chaperone DnaJ CH55_2337 IPR018253 DnaJ domain, conserved site CH55_2337 IPR036410 CH55_2337 CH55_2337 IPR036869 CH55_2337 CH55_2338 IPR012725 Chaperone DnaK CH55_2338 IPR013126 Heat shock protein 70 family CH55_2338 IPR018181 Heat shock protein 70, conserved site CH55_2338 IPR029047 Heat shock protein 70kD, peptide-binding domain CH55_2338 IPR029048 Heat shock protein 70kD, C-terminal domain CH55_2339 IPR000791 GPR1/FUN34/yaaH CH55_234 IPR003416 MgtC/SapB/SrpB transporter CH55_2340 IPR011024 Gamma-crystallin-related CH55_2340 IPR016181 Acyl-CoA N-acyltransferase CH55_2341 IPR011701 Major facilitator superfamily CH55_2341 IPR036259 CH55_2341 CH55_2342 IPR001453 Molybdopterin binding domain CH55_2342 IPR008284 Molybdenum cofactor biosynthesis, conserved site CH55_2342 IPR036425 CH55_2342 CH55_2343 IPR001585 Transaldolase CH55_2343 IPR004730 Transaldolase type 1 CH55_2343 IPR013785 Aldolase-type TIM barrel CH55_2343 IPR018225 Transaldolase, active site CH55_2344 IPR005583 Uncharacterised protein family UPF0246 CH55_2346 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH55_2346 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_2346 IPR004450 Threonine synthase-like CH55_2346 IPR029144 Threonine synthase, N-terminal CH55_2346 IPR036052 CH55_2346 CH55_2346 IPR037158 CH55_2346 CH55_2347 IPR000870 Homoserine kinase CH55_2347 IPR006203 GHMP kinase, ATP-binding, conserved site CH55_2347 IPR006204 GHMP kinase N-terminal domain CH55_2347 IPR013750 GHMP kinase, C-terminal domain CH55_2347 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2347 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2347 IPR036554 CH55_2347 CH55_2348 IPR001048 Aspartate/glutamate/uridylate kinase CH55_2348 IPR001341 Aspartate kinase domain CH55_2348 IPR001342 Homoserine dehydrogenase, catalytic CH55_2348 IPR002912 ACT domain CH55_2348 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CH55_2348 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CH55_2348 IPR018042 Aspartate kinase, conserved site CH55_2348 IPR019811 Homoserine dehydrogenase, conserved site CH55_2348 IPR027795 GATS-like ACT domain CH55_2348 IPR036291 CH55_2348 CH55_2348 IPR036393 CH55_2348 CH55_235 IPR004014 Cation-transporting P-type ATPase, N-terminal CH55_235 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB CH55_235 IPR008250 P-type ATPase, A domain CH55_235 IPR023298 P-type ATPase, transmembrane domain CH55_2350 IPR001789 Signal transduction response regulator, receiver domain CH55_2350 IPR001867 Signal transduction response regulator, C-terminal CH55_2350 IPR011006 CheY-like superfamily CH55_2350 IPR016032 Signal transduction response regulator, C-terminal effector CH55_2350 IPR036388 CH55_2350 CH55_2351 IPR010292 Uncharacterised protein family CreA CH55_2353 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CH55_2353 IPR013078 Histidine phosphatase superfamily, clade-1 CH55_2353 IPR023086 Phosphoglycerate mutase, GpmB, probable CH55_2353 IPR029033 Histidine phosphatase superfamily CH55_2354 IPR009057 Homeodomain-like CH55_2354 IPR010499 Bacterial transcription activator, effector binding CH55_2354 IPR011256 Regulatory factor, effector binding domain CH55_2354 IPR018060 DNA binding HTH domain, AraC-type CH55_2354 IPR018062 HTH domain AraC-type, conserved site CH55_2354 IPR020449 Transcription regulator HTH, AraC- type CH55_2354 IPR029442 GyrI-like small molecule binding domain CH55_2355 IPR000831 Trp repressor CH55_2355 IPR010921 Trp repressor/replication initiator CH55_2355 IPR013335 Trp repressor, bacterial CH55_2355 IPR038116 CH55_2355 CH55_2356 IPR002786 Non-canonical purine NTP phosphatase CH55_2356 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CH55_2356 IPR029001 Inosine triphosphate pyrophosphatase-like CH55_2357 IPR000189 Prokaryotic transglycosylase, active site CH55_2357 IPR008258 Lytic transglycosylase-like SLT domain CH55_2357 IPR008939 Lytic transglycosylase, superhelical U-shaped CH55_2357 IPR012289 Lytic transglycosylase, superhelical linker CH55_2357 IPR023346 Lysozyme-like domain CH55_2357 IPR037061 CH55_2357 CH55_2358 IPR001757 Cation-transporting P-type ATPase CH55_2358 IPR004014 Cation-transporting P-type ATPase, N-terminal CH55_2358 IPR006068 Cation-transporting P-type ATPase, C-terminal CH55_2358 IPR008250 P-type ATPase, A domain CH55_2358 IPR018303 P-type ATPase, phosphorylation site CH55_2358 IPR023214 HAD-like domain CH55_2358 IPR023298 P-type ATPase, transmembrane domain CH55_2358 IPR023299 P-type ATPase, cytoplasmic domain N CH55_2358 IPR036412 CH55_2358 CH55_2359 IPR025293 Protein of unknown function DUF4154 CH55_236 IPR001757 Cation-transporting P-type ATPase CH55_236 IPR006068 Cation-transporting P-type ATPase, C-terminal CH55_236 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB CH55_236 IPR018303 P-type ATPase, phosphorylation site CH55_236 IPR023214 HAD-like domain CH55_236 IPR023298 P-type ATPase, transmembrane domain CH55_236 IPR023299 P-type ATPase, cytoplasmic domain N CH55_236 IPR036412 CH55_236 CH55_2360 IPR000160 GGDEF domain CH55_2360 IPR029787 Nucleotide cyclase CH55_2360 IPR033417 CH55_2360 CH55_2361 IPR006664 Outer membrane protein, bacterial CH55_2361 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_2361 IPR036737 CH55_2361 CH55_2362 IPR003439 ABC transporter-like CH55_2362 IPR017871 ABC transporter, conserved site CH55_2362 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2363 IPR003439 ABC transporter-like CH55_2363 IPR003593 AAA+ ATPase domain CH55_2363 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2363 IPR032781 CH55_2363 CH55_2364 IPR003812 Fido domain CH55_2364 IPR025230 Domain of unknown function DUF4172 CH55_2364 IPR036388 CH55_2364 CH55_2364 IPR036597 CH55_2364 CH55_2365 IPR001387 Cro/C1-type helix-turn-helix domain CH55_2365 IPR004821 Cytidyltransferase-like domain CH55_2365 IPR006417 Nicotinamide-nucleotide adenylyltransferase CH55_2365 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_2365 IPR016429 Bifunctional transcriptional regulator NadR CH55_2365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2365 IPR038727 CH55_2365 CH55_2366 IPR003593 AAA+ ATPase domain CH55_2366 IPR004504 DNA repair protein RadA CH55_2366 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2366 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2366 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2367 IPR023190 Phosphoserine phosphatase, domain 2 CH55_2367 IPR023214 HAD-like domain CH55_2367 IPR036412 CH55_2367 CH55_2368 IPR019305 Uncharacterised protein family Smp CH55_2369 IPR000845 Nucleoside phosphorylase domain CH55_2369 IPR004402 Purine nucleoside phosphorylase DeoD-type CH55_2369 IPR018016 Nucleoside phosphorylase, conserved site CH55_2369 IPR035994 CH55_2369 CH55_237 IPR023559 Flagellar transcriptional activator FlhD CH55_237 IPR036194 CH55_237 CH55_2370 IPR006124 Metalloenzyme CH55_2370 IPR010045 Phosphopentomutase CH55_2370 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_2370 IPR017850 Alkaline-phosphatase-like, core domain CH55_2370 IPR024052 Phosphopentomutase DeoB cap domain CH55_2371 IPR000312 Glycosyl transferase, family 3 CH55_2371 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CH55_2371 IPR035902 CH55_2371 CH55_2371 IPR036566 CH55_2371 CH55_2372 IPR000312 Glycosyl transferase, family 3 CH55_2372 IPR017459 Glycosyl transferase family 3, N-terminal domain CH55_2372 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CH55_2372 IPR035902 CH55_2372 CH55_2372 IPR036320 CH55_2372 CH55_2373 IPR002915 DeoC/FbaB/ lacD aldolase CH55_2373 IPR011343 Deoxyribose-phosphate aldolase CH55_2373 IPR013785 Aldolase-type TIM barrel CH55_2373 IPR023649 Deoxyribose-phosphate aldolase type II CH55_2374 IPR002668 Concentrative nucleoside transporter N-terminal domain CH55_2374 IPR011642 Nucleoside recognition Gate CH55_2374 IPR011657 Concentrative nucleoside transporter C-terminal domain CH55_2374 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CH55_2375 IPR001130 TatD family CH55_2375 IPR032466 CH55_2375 CH55_2376 IPR001130 TatD family CH55_2376 IPR018228 Deoxyribonuclease, TatD-related, conserved site CH55_2376 IPR032466 CH55_2376 CH55_2377 IPR002641 Patatin/Phospholipase A2-related CH55_2377 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH55_2378 IPR009760 Protein of unknown function DUF1328 CH55_2379 IPR007055 BON domain CH55_2379 IPR014004 Transport-associated and nodulation domain, bacteria CH55_238 IPR007944 Flagellar transcriptional activator FlhC CH55_2380 IPR000795 Elongation factor, GTP-binding domain CH55_2380 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CH55_2380 IPR004548 Peptide chain release factor 3 CH55_2380 IPR005225 Small GTP-binding protein domain CH55_2380 IPR009000 Translation protein, beta-barrel domain CH55_2380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2380 IPR031157 CH55_2380 CH55_2380 IPR032090 CH55_2380 CH55_2380 IPR035647 CH55_2380 CH55_2380 IPR038467 CH55_2380 CH55_2381 IPR000182 GNAT domain CH55_2381 IPR006464 Ribosomal-protein-alanine acetyltransferase CH55_2381 IPR016181 Acyl-CoA N-acyltransferase CH55_2382 IPR004615 DNA polymerase III, psi subunit CH55_2382 IPR036654 CH55_2382 CH55_2383 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_2383 IPR007848 Methyltransferase small domain CH55_2383 IPR013675 Methyltransferase small, N-terminal CH55_2383 IPR023543 rRNA small subunit methyltransferase C CH55_2383 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2385 IPR009885 Protein of unknown function DUF1435 CH55_2386 IPR000160 GGDEF domain CH55_2386 IPR029787 Nucleotide cyclase CH55_2387 IPR000070 Pectinesterase, catalytic CH55_2387 IPR011050 Pectin lyase fold/virulence factor CH55_2387 IPR012334 Pectin lyase fold CH55_2389 IPR001036 Acriflavin resistance protein CH55_2389 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_239 IPR000540 Flagellar motor protein MotA, conserved site CH55_239 IPR002898 MotA/TolQ/ExbB proton channel CH55_239 IPR022522 Flagellar motor stator, MotA CH55_2390 IPR003997 RTX secretion protein D, Gram-negative bacteria CH55_2390 IPR006143 RND efflux pump, membrane fusion protein CH55_2390 IPR032317 CH55_2390 CH55_2391 IPR010445 Protein of unknown function DUF1049 CH55_2392 IPR007016 O-antigen ligase-related CH55_2393 IPR002201 Glycosyl transferase, family 9 CH55_2393 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CH55_2394 IPR000577 CH55_2394 CH55_2394 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_2394 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_2394 IPR033676 CH55_2394 CH55_2395 IPR007324 Sugar-binding domain, putative CH55_2395 IPR037171 CH55_2395 CH55_2396 IPR012318 Helix-turn-helix motif, Crp-type CH55_2396 IPR036388 CH55_2396 CH55_2397 IPR003439 ABC transporter-like CH55_2397 IPR003593 AAA+ ATPase domain CH55_2397 IPR017871 ABC transporter, conserved site CH55_2397 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2398 IPR001851 ABC transporter, permease CH55_2399 IPR001851 ABC transporter, permease CH55_24 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH55_24 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CH55_24 IPR036291 CH55_24 CH55_240 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_240 IPR025713 Motility protein B, N-terminal domain CH55_240 IPR036737 CH55_240 CH55_2400 IPR001851 ABC transporter, permease CH55_2401 IPR025997 Periplasmic binding protein domain CH55_2401 IPR028082 Periplasmic binding protein-like I CH55_2402 IPR002915 DeoC/FbaB/ lacD aldolase CH55_2402 IPR013785 Aldolase-type TIM barrel CH55_2402 IPR033673 CH55_2402 CH55_2403 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CH55_2403 IPR011008 Dimeric alpha-beta barrel CH55_2403 IPR033672 CH55_2403 CH55_2404 IPR019637 Protein of unknown function DUF2501 CH55_2405 IPR000032 Phosphocarrier HPr protein-like CH55_2405 IPR000121 PEP-utilising enzyme, C-terminal CH55_2405 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH55_2405 IPR002178 PTS EIIA type-2 domain CH55_2405 IPR006318 Phosphoenolpyruvate-utilising enzyme CH55_2405 IPR008279 PEP-utilising enzyme, mobile domain CH55_2405 IPR008731 Phosphotransferase system, enzyme I N-terminal CH55_2405 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_2405 IPR016152 Phosphotransferase/anion transporter CH55_2405 IPR018274 PEP-utilising enzyme, active site CH55_2405 IPR023151 PEP-utilising enzyme, conserved site CH55_2405 IPR035895 CH55_2405 CH55_2405 IPR036618 CH55_2405 CH55_2405 IPR036637 CH55_2405 CH55_2406 IPR003352 Phosphotransferase system, EIIC CH55_2406 IPR006327 Phosphotransferase system, fructose IIC component CH55_2407 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CH55_2407 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH55_2407 IPR036095 CH55_2407 CH55_2408 IPR009057 Homeodomain-like CH55_2408 IPR018060 DNA binding HTH domain, AraC-type CH55_2408 IPR018062 HTH domain AraC-type, conserved site CH55_2408 IPR020449 Transcription regulator HTH, AraC- type CH55_2409 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CH55_2409 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH55_2409 IPR036095 CH55_2409 CH55_241 IPR002545 CheW-like protein CH55_241 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_241 IPR004105 Histidine kinase CheA-like, homodimeric domain CH55_241 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_241 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH55_241 IPR015162 CheY binding CH55_241 IPR035891 CH55_241 CH55_241 IPR036061 CH55_241 CH55_241 IPR036097 CH55_241 CH55_241 IPR036641 CH55_241 CH55_241 IPR036890 CH55_241 CH55_241 IPR037006 CH55_241 CH55_2411 IPR010295 Protein of unknown function DUF898 CH55_2412 IPR001915 Peptidase M48 CH55_2413 IPR014544 Uncharacterised conserved protein UCP028408 CH55_2413 IPR024534 Domain of unknown function DUF2220 CH55_2413 IPR024537 Domain of unknown function DUF3322 CH55_2419 IPR036890 CH55_2419 CH55_242 IPR002545 CheW-like protein CH55_242 IPR036061 CH55_242 CH55_2420 IPR002941 DNA methylase N-4/N-6 CH55_2420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2421 IPR002514 Transposase IS3/IS911family CH55_2421 IPR009057 Homeodomain-like CH55_2422 IPR019292 5-methylcytosine restriction system component CH55_2423 IPR003593 AAA+ ATPase domain CH55_2423 IPR011704 ATPase, dynein-related, AAA domain CH55_2423 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2424 IPR001584 Integrase, catalytic core CH55_2424 IPR006120 Resolvase, HTH domain CH55_2424 IPR009057 Homeodomain-like CH55_2424 IPR012337 Ribonuclease H-like domain CH55_2425 IPR002611 IstB-like ATP-binding protein CH55_2425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2426 IPR002611 IstB-like ATP-binding protein CH55_2427 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase CH55_2427 IPR023509 D-Tyr tRNAtyr deacylase-like domain CH55_2428 IPR017039 Virulence factor BrkB CH55_2428 IPR023679 Uncharacterised protein family UPF0761, bacterial CH55_2429 IPR006439 HAD hydrolase, subfamily IA CH55_2429 IPR023198 Phosphoglycolate phosphatase, domain 2 CH55_2429 IPR023214 HAD-like domain CH55_2429 IPR036412 CH55_2429 CH55_243 IPR011701 Major facilitator superfamily CH55_243 IPR036259 CH55_243 CH55_2430 IPR000640 Translation elongation factor EFG, V domain CH55_2430 IPR000795 Elongation factor, GTP-binding domain CH55_2430 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CH55_2430 IPR005225 Small GTP-binding protein domain CH55_2430 IPR006298 GTP-binding protein TypA CH55_2430 IPR009000 Translation protein, beta-barrel domain CH55_2430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2430 IPR031157 CH55_2430 CH55_2430 IPR035647 CH55_2430 CH55_2431 IPR001637 Glutamine synthetase class-I, adenylation site CH55_2431 IPR004809 Glutamine synthetase type I CH55_2431 IPR008146 Glutamine synthetase, catalytic domain CH55_2431 IPR008147 Glutamine synthetase, beta-Grasp CH55_2431 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CH55_2431 IPR027302 Glutamine synthetase, N-terminal conserved site CH55_2431 IPR027303 Glutamine synthetase, glycine-rich site CH55_2431 IPR036651 CH55_2431 CH55_2432 IPR000014 PAS domain CH55_2432 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_2432 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_2432 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_2432 IPR013767 PAS fold CH55_2432 IPR035965 CH55_2432 CH55_2432 IPR036097 CH55_2432 CH55_2432 IPR036890 CH55_2432 CH55_2433 IPR001789 Signal transduction response regulator, receiver domain CH55_2433 IPR002078 RNA polymerase sigma factor 54 interaction domain CH55_2433 IPR002197 DNA binding HTH domain, Fis-type CH55_2433 IPR003593 AAA+ ATPase domain CH55_2433 IPR009057 Homeodomain-like CH55_2433 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) CH55_2433 IPR011006 CheY-like superfamily CH55_2433 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH55_2433 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH55_2433 IPR025944 Sigma-54 interaction domain, conserved site CH55_2433 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2434 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN CH55_2434 IPR006638 Elongator protein 3/MiaB/NifB CH55_2434 IPR007197 Radical SAM CH55_2434 IPR010723 HemN, C-terminal domain CH55_2434 IPR023404 Radical SAM, alpha/beta horseshoe CH55_2435 IPR007336 Der GTPase activator CH55_2436 IPR006073 GTP binding domain CH55_2436 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CH55_2436 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2437 IPR002686 Transposase IS200-like CH55_2437 IPR036515 CH55_2437 CH55_2438 IPR002686 Transposase IS200-like CH55_2438 IPR036515 CH55_2438 CH55_2439 IPR001098 DNA-directed DNA polymerase, family A, palm domain CH55_2439 IPR002298 DNA polymerase A CH55_2439 IPR002421 5'-3' exonuclease, N-terminal CH55_2439 IPR002562 3'-5' exonuclease domain CH55_2439 IPR008918 Helix-hairpin-helix motif, class 2 CH55_2439 IPR012337 Ribonuclease H-like domain CH55_2439 IPR018320 DNA polymerase 1 CH55_2439 IPR019760 DNA-directed DNA polymerase, family A, conserved site CH55_2439 IPR020045 5'-3' exonuclease, C-terminal domain CH55_2439 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CH55_2439 IPR029060 PIN domain-like CH55_2439 IPR036279 CH55_2439 CH55_2439 IPR036397 CH55_2439 CH55_244 IPR006056 Enamine/imine deaminase YjgF-like CH55_244 IPR006175 YjgF/Yer057p/UK114 family CH55_244 IPR035959 CH55_244 CH55_2440 IPR001853 DSBA-like thioredoxin domain CH55_2440 IPR017937 Thioredoxin, conserved site CH55_2440 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CH55_2440 IPR036249 CH55_2440 CH55_2441 IPR002575 Aminoglycoside phosphotransferase CH55_2441 IPR011009 Protein kinase-like domain CH55_2441 IPR032882 CH55_2441 CH55_2442 IPR009383 Protein of unknown function DUF1040 CH55_2442 IPR038134 CH55_2442 CH55_2443 IPR013482 Molybdenum cofactor guanylyltransferase CH55_2443 IPR025877 MobA-like NTP transferase domain CH55_2443 IPR029044 Nucleotide-diphospho-sugar transferases CH55_2444 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CH55_2444 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2445 IPR001207 Transposase, mutator type CH55_245 IPR013022 Xylose isomerase-like, TIM barrel domain CH55_245 IPR036237 CH55_245 CH55_2451 IPR001584 Integrase, catalytic core CH55_2451 IPR006120 Resolvase, HTH domain CH55_2451 IPR009057 Homeodomain-like CH55_2451 IPR012337 Ribonuclease H-like domain CH55_2453 IPR002611 IstB-like ATP-binding protein CH55_2453 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2454 IPR002611 IstB-like ATP-binding protein CH55_2455 IPR004045 Glutathione S-transferase, N-terminal CH55_2455 IPR016639 Glutathione S-transferase (GST) CH55_2455 IPR036249 CH55_2455 CH55_2455 IPR036282 CH55_2455 CH55_2456 IPR000847 Transcription regulator HTH, LysR CH55_2456 IPR005119 LysR, substrate-binding CH55_2456 IPR036388 CH55_2456 CH55_2456 IPR036390 CH55_2456 CH55_2457 IPR003829 Pirin, N-terminal domain CH55_2457 IPR011051 RmlC-like cupin domain CH55_2457 IPR012093 Pirin CH55_2457 IPR014710 RmlC-like jelly roll fold CH55_2458 IPR000878 Tetrapyrrole methylase CH55_2458 IPR008189 rRNA small subunit methyltransferase I CH55_2458 IPR014776 Tetrapyrrole methylase, subdomain 2 CH55_2458 IPR014777 Tetrapyrrole methylase, subdomain 1 CH55_2458 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CH55_2458 IPR035996 CH55_2458 CH55_2459 IPR007443 Penicillin-binding protein activator LpoA CH55_2459 IPR011990 Tetratricopeptide-like helical domain CH55_2459 IPR028082 Periplasmic binding protein-like I CH55_246 IPR013559 YheO-like CH55_246 IPR039445 CH55_246 CH55_2460 IPR003509 Uncharacterised protein family UPF0102 CH55_2460 IPR011335 Restriction endonuclease type II-like CH55_2460 IPR011856 tRNA endonuclease-like domain CH55_2461 IPR001347 Sugar isomerase (SIS) CH55_2461 IPR023070 DnaA initiator-associating protein CH55_2462 IPR007055 BON domain CH55_2462 IPR014004 Transport-associated and nodulation domain, bacteria CH55_2463 IPR001264 Glycosyl transferase, family 51 CH55_2463 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase CH55_2463 IPR023346 Lysozyme-like domain CH55_2463 IPR036950 CH55_2463 CH55_2464 IPR026041 Enhancing lycopene biosynthesis protein 2 CH55_2464 IPR029062 Class I glutamine amidotransferase-like CH55_2465 IPR000014 PAS domain CH55_2465 IPR001789 Signal transduction response regulator, receiver domain CH55_2465 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_2465 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_2465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_2465 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH55_2465 IPR011006 CheY-like superfamily CH55_2465 IPR013767 PAS fold CH55_2465 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB CH55_2465 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain CH55_2465 IPR035965 CH55_2465 CH55_2465 IPR036097 CH55_2465 CH55_2465 IPR036641 CH55_2465 CH55_2465 IPR036890 CH55_2465 CH55_2466 IPR005911 Conserved hypothetical protein CHP01212 CH55_2466 IPR006638 Elongator protein 3/MiaB/NifB CH55_2466 IPR007197 Radical SAM CH55_2466 IPR023404 Radical SAM, alpha/beta horseshoe CH55_2466 IPR032432 CH55_2466 CH55_2467 IPR002489 Glutamate synthase, alpha subunit, C-terminal CH55_2467 IPR002932 Glutamate synthase domain CH55_2467 IPR006982 Glutamate synthase, central-N CH55_2467 IPR013785 Aldolase-type TIM barrel CH55_2467 IPR017932 Glutamine amidotransferase type 2 domain CH55_2467 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_2467 IPR036485 CH55_2467 CH55_2468 IPR009051 Alpha-helical ferredoxin CH55_2468 IPR028261 Dihydroprymidine dehydrogenase domain II CH55_2468 IPR036188 CH55_2468 CH55_2469 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_2469 IPR036188 CH55_2469 CH55_247 IPR006315 Outer membrane autotransporter barrel CH55_247 IPR011050 Pectin lyase fold/virulence factor CH55_247 IPR012332 P22 tailspike C-terminal domain-like CH55_2471 IPR007481 Stringent starvation protein B CH55_2471 IPR036760 CH55_2471 CH55_2472 IPR004045 Glutathione S-transferase, N-terminal CH55_2472 IPR004046 Glutathione S-transferase, C-terminal CH55_2472 IPR036249 CH55_2472 CH55_2472 IPR036282 CH55_2472 CH55_2473 IPR000754 Ribosomal protein S9 CH55_2473 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2473 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2473 IPR020574 Ribosomal protein S9, conserved site CH55_2473 IPR023035 Ribosomal protein S9, bacterial/plastid CH55_2474 IPR005822 Ribosomal protein L13 CH55_2474 IPR005823 Ribosomal protein L13, bacterial-type CH55_2474 IPR023563 Ribosomal protein L13, conserved site CH55_2474 IPR036899 CH55_2474 CH55_2475 IPR005654 ATPase, AFG1-like CH55_2475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2475 IPR030870 CH55_2475 CH55_2477 IPR009386 Protein of unknown function DUF1043 CH55_2478 IPR001478 PDZ domain CH55_2478 IPR001940 Peptidase S1C CH55_2478 IPR009003 Trypsin-like cysteine/serine peptidase domain CH55_2478 IPR011782 Peptidase S1C, Do CH55_2478 IPR036034 CH55_2478 CH55_2479 IPR002686 Transposase IS200-like CH55_2479 IPR036515 CH55_2479 CH55_248 IPR005546 Autotransporter beta-domain CH55_248 IPR006315 Outer membrane autotransporter barrel CH55_248 IPR036709 CH55_248 CH55_2480 IPR001478 PDZ domain CH55_2480 IPR001940 Peptidase S1C CH55_2480 IPR009003 Trypsin-like cysteine/serine peptidase domain CH55_2480 IPR011783 Peptidase S1C, DegS CH55_2480 IPR036034 CH55_2480 CH55_2481 IPR001986 Enolpyruvate transferase domain CH55_2481 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CH55_2481 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CH55_2481 IPR036968 CH55_2481 CH55_2482 IPR002634 BolA protein CH55_2482 IPR036065 CH55_2482 CH55_2483 IPR002645 STAS domain CH55_2483 IPR036513 CH55_2483 CH55_2484 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CH55_2485 IPR003399 Mammalian cell entry-related CH55_2485 IPR030970 CH55_2485 CH55_2486 IPR003453 Permease domain CH55_2486 IPR030802 CH55_2486 CH55_2487 IPR003439 ABC transporter-like CH55_2487 IPR003593 AAA+ ATPase domain CH55_2487 IPR017871 ABC transporter, conserved site CH55_2487 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2488 IPR004481 Sodium/potassium/calcium exchanger CH55_2488 IPR004837 Sodium/calcium exchanger membrane region CH55_2489 IPR000644 CBS domain CH55_2489 IPR001347 Sugar isomerase (SIS) CH55_2489 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CH55_249 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein CH55_249 IPR019286 Protein of unknown function DUF2339, transmembrane CH55_2490 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase CH55_2490 IPR023214 HAD-like domain CH55_2490 IPR036412 CH55_2490 CH55_2491 IPR010664 Lipopolysaccharide assembly, LptC-related CH55_2491 IPR026265 Lipopolysaccharide export system protein LptC CH55_2492 IPR005653 Organic solvent tolerance-like, N-terminal CH55_2492 IPR014340 Lipopolysaccharide assembly, LptA CH55_2493 IPR003439 ABC transporter-like CH55_2493 IPR003593 AAA+ ATPase domain CH55_2493 IPR017871 ABC transporter, conserved site CH55_2493 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2493 IPR030921 CH55_2493 CH55_2493 IPR032823 CH55_2493 CH55_2494 IPR000394 RNA polymerase sigma factor 54 CH55_2494 IPR007046 RNA polymerase sigma factor 54, core-binding CH55_2494 IPR007634 RNA polymerase sigma factor 54, DNA-binding CH55_2494 IPR038709 CH55_2494 CH55_2495 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein CH55_2495 IPR036567 CH55_2495 CH55_2496 IPR002178 PTS EIIA type-2 domain CH55_2496 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CH55_2496 IPR016152 Phosphotransferase/anion transporter CH55_2497 IPR005337 ATPase, P-loop-containing CH55_2497 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2498 IPR000032 Phosphocarrier HPr protein-like CH55_2498 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH55_2498 IPR035895 CH55_2498 CH55_2499 IPR002082 Aspartate carbamoyltransferase CH55_2499 IPR006130 Aspartate/ornithine carbamoyltransferase CH55_2499 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CH55_2499 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CH55_2499 IPR036901 CH55_2499 CH55_25 IPR001406 Pseudouridine synthase I, TruA CH55_25 IPR020095 Pseudouridine synthase I, TruA, C-terminal CH55_25 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CH55_25 IPR020103 Pseudouridine synthase, catalytic domain CH55_2500 IPR002801 Aspartate transcarbamylase regulatory subunit CH55_2500 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CH55_2500 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CH55_2500 IPR036792 CH55_2500 CH55_2500 IPR036793 CH55_2500 CH55_2501 IPR006056 Enamine/imine deaminase YjgF-like CH55_2501 IPR006175 YjgF/Yer057p/UK114 family CH55_2501 IPR019897 YjgF-like protein, conserved site CH55_2501 IPR035959 CH55_2501 CH55_2502 IPR031948 CH55_2502 CH55_2502 IPR038643 CH55_2502 CH55_2503 IPR000843 Transcription regulator HTH, LacI CH55_2503 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2503 IPR012771 Trehalose operon repressor CH55_2503 IPR028082 Periplasmic binding protein-like I CH55_2504 IPR001996 Phosphotransferase system, IIB component, type 1 CH55_2504 IPR003352 Phosphotransferase system, EIIC CH55_2504 IPR011296 Phosphotransferase system, trehalose-specific IIBC component CH55_2504 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH55_2504 IPR036878 CH55_2504 CH55_2505 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH55_2505 IPR012769 Trehalose-6-phosphate hydrolase CH55_2505 IPR013780 Glycosyl hydrolase, family 13, all-beta CH55_2505 IPR017853 Glycoside hydrolase, superfamily CH55_2505 IPR022567 Domain of unknown function DUF3459 CH55_2506 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CH55_2506 IPR023459 Transcription elongation factor GreA/GreB family CH55_2506 IPR028625 Regulator of nucleoside diphosphate kinase CH55_2506 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CH55_2506 IPR036953 CH55_2506 CH55_2507 IPR009155 Cytochrome b562 CH55_2507 IPR010980 Cytochrome c/b562 CH55_2509 IPR002510 TldD/PmbA CH55_2509 IPR035068 CH55_2509 CH55_2509 IPR036059 CH55_2509 CH55_251 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding CH55_251 IPR003660 HAMP linker domain CH55_251 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_251 IPR004090 Chemotaxis methyl-accepting receptor CH55_251 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH55_251 IPR035440 CH55_251 CH55_2510 IPR006839 Ribosome-associated, YjgA CH55_2510 IPR023153 PSPTO4464-like domain CH55_2511 IPR000468 Barstar (barnase inhibitor) CH55_2511 IPR035905 CH55_2511 CH55_2512 IPR000026 Guanine-specific ribonuclease N1/T1 CH55_2512 IPR001887 Barnase CH55_2512 IPR016191 Ribonuclease/ribotoxin CH55_2513 IPR015590 Aldehyde dehydrogenase domain CH55_2513 IPR016161 Aldehyde/histidinol dehydrogenase CH55_2513 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_2513 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_2514 IPR015590 Aldehyde dehydrogenase domain CH55_2514 IPR016160 Aldehyde dehydrogenase, cysteine active site CH55_2514 IPR016161 Aldehyde/histidinol dehydrogenase CH55_2514 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_2514 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_2514 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CH55_2515 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CH55_2515 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB CH55_2516 IPR006143 RND efflux pump, membrane fusion protein CH55_2516 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CH55_2516 IPR039562 CH55_2516 CH55_2517 IPR012451 Protein of unknown function DUF1656 CH55_2518 IPR000847 Transcription regulator HTH, LysR CH55_2518 IPR005119 LysR, substrate-binding CH55_2518 IPR036388 CH55_2518 CH55_2518 IPR036390 CH55_2518 CH55_2519 IPR000847 Transcription regulator HTH, LysR CH55_2519 IPR036388 CH55_2519 CH55_2519 IPR036390 CH55_2519 CH55_252 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding CH55_252 IPR003660 HAMP linker domain CH55_252 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_252 IPR004090 Chemotaxis methyl-accepting receptor CH55_252 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CH55_252 IPR035440 CH55_252 CH55_2520 IPR018003 Insecticidal toxin complex/plasmid virulence protein CH55_2522 IPR003284 Salmonella virulence plasmid 65kDa B protein CH55_2522 IPR022044 Insecticide toxin TcdB middle/C-terminal CH55_2522 IPR022045 Insecticide toxin TcdB middle/N-terminal CH55_2523 IPR032126 CH55_2523 CH55_2524 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CH55_2524 IPR039561 CH55_2524 CH55_2525 IPR022538 Protein of unknown function DUF2570 CH55_2526 IPR000340 Dual specificity phosphatase, catalytic domain CH55_2526 IPR006530 YD repeat CH55_2526 IPR016130 Protein-tyrosine phosphatase, active site CH55_2526 IPR022385 Rhs repeat-associated core CH55_2526 IPR029021 Protein-tyrosine phosphatase-like CH55_2528 IPR006530 YD repeat CH55_2528 IPR016130 Protein-tyrosine phosphatase, active site CH55_2528 IPR022385 Rhs repeat-associated core CH55_2528 IPR029021 Protein-tyrosine phosphatase-like CH55_2529 IPR002510 TldD/PmbA CH55_2529 IPR025502 TldD CH55_2529 IPR035068 CH55_2529 CH55_2529 IPR036059 CH55_2529 CH55_253 IPR000780 MCP methyltransferase, CheR-type CH55_253 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CH55_253 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CH55_253 IPR026024 Chemotaxis protein methyltransferase CheR CH55_253 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_253 IPR036804 CH55_253 CH55_2530 IPR001110 Uncharacterised protein family UPF0012, conserved site CH55_2530 IPR003010 Carbon-nitrogen hydrolase CH55_2530 IPR036526 CH55_2530 CH55_2531 IPR011836 Conserved hypothetical protein CHP02099 CH55_2531 IPR025263 Domain of unknown function DUF3971 CH55_2531 IPR032712 CH55_2531 CH55_2532 IPR003029 Ribosomal protein S1, RNA-binding domain CH55_2532 IPR004659 Ribonuclease E/G CH55_2532 IPR012340 Nucleic acid-binding, OB-fold CH55_2532 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CH55_2532 IPR022967 RNA-binding domain, S1 CH55_2533 IPR003697 Maf-like protein CH55_2533 IPR029001 Inosine triphosphate pyrophosphatase-like CH55_2534 IPR007227 Cell shape-determining protein MreD CH55_2534 IPR026034 Cell shape-determining protein MreD, proteobacterial type CH55_2535 IPR007221 Rod shape-determining protein MreC CH55_2536 IPR004753 Cell shape determining protein MreB/Mrl CH55_2537 IPR000160 GGDEF domain CH55_2537 IPR001633 EAL domain CH55_2537 IPR029787 Nucleotide cyclase CH55_2537 IPR033423 CH55_2537 CH55_2537 IPR035919 CH55_2537 CH55_2538 IPR011032 GroES (chaperonin 10)-like CH55_2538 IPR013149 Alcohol dehydrogenase, C-terminal CH55_2538 IPR013154 Alcohol dehydrogenase GroES-like CH55_2538 IPR014188 Acrylyl-CoA reductase AcuI CH55_2538 IPR020843 Polyketide synthase, enoylreductase CH55_2538 IPR036291 CH55_2538 CH55_2539 IPR000572 Oxidoreductase, molybdopterin-binding domain CH55_2539 IPR022867 Sulphoxide reductase catalytic subunit YedY CH55_2539 IPR036374 CH55_2539 CH55_254 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CH55_254 IPR001789 Signal transduction response regulator, receiver domain CH55_254 IPR008248 Signal transduction response regulator, chemotaxis, CheB CH55_254 IPR011006 CheY-like superfamily CH55_254 IPR035909 CH55_254 CH55_2540 IPR013130 Ferric reductase transmembrane component-like domain CH55_2540 IPR022837 Sulphoxide reductase heme-binding subunit YedZ CH55_2541 IPR001874 Dehydroquinase, class II CH55_2541 IPR018509 Dehydroquinase, class II, conserved site CH55_2541 IPR036441 CH55_2541 CH55_2542 IPR000089 Biotin/lipoyl attachment CH55_2542 IPR001249 Acetyl-CoA biotin carboxyl carrier CH55_2542 IPR001882 Biotin-binding site CH55_2542 IPR011053 Single hybrid motif CH55_2543 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CH55_2543 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CH55_2543 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CH55_2543 IPR005482 Biotin carboxylase, C-terminal CH55_2543 IPR011054 Rudiment single hybrid motif CH55_2543 IPR013815 ATP-grasp fold, subdomain 1 CH55_2543 IPR016185 Pre-ATP-grasp domain CH55_2545 IPR010398 Protein of unknown function DUF997 CH55_2546 IPR001734 Sodium/solute symporter CH55_2546 IPR011849 Sodium/pantothenate symporter CH55_2546 IPR018212 Sodium/solute symporter, conserved site CH55_2546 IPR038377 CH55_2546 CH55_2547 IPR004498 Ribosomal protein L11 methyltransferase CH55_2547 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2548 IPR001269 tRNA-dihydrouridine synthase CH55_2548 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CH55_2548 IPR013785 Aldolase-type TIM barrel CH55_2548 IPR018517 tRNA-dihydrouridine synthase, conserved site CH55_2548 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CH55_2548 IPR032887 CH55_2548 CH55_2549 IPR002197 DNA binding HTH domain, Fis-type CH55_2549 IPR005412 DNA-binding protein Fis CH55_2549 IPR009057 Homeodomain-like CH55_255 IPR001789 Signal transduction response regulator, receiver domain CH55_255 IPR011006 CheY-like superfamily CH55_2551 IPR000524 Transcription regulator HTH, GntR CH55_2551 IPR008920 Transcription regulator FadR/GntR, C-terminal CH55_2551 IPR011711 GntR, C-terminal CH55_2551 IPR036388 CH55_2551 CH55_2551 IPR036390 CH55_2551 CH55_2552 IPR005829 Sugar transporter, conserved site CH55_2552 IPR011701 Major facilitator superfamily CH55_2552 IPR036259 CH55_2552 CH55_2553 IPR003779 Carboxymuconolactone decarboxylase-like CH55_2553 IPR029032 AhpD-like CH55_2554 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CH55_2554 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CH55_2554 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_2554 IPR013328 Dehydrogenase, multihelical CH55_2554 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CH55_2554 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CH55_2554 IPR036291 CH55_2554 CH55_2555 IPR001279 Beta-lactamase-like CH55_2555 IPR036866 CH55_2555 CH55_2556 IPR008816 Glycine zipper 2TM domain CH55_2557 IPR002059 Cold-shock protein, DNA-binding CH55_2557 IPR011129 Cold shock protein CH55_2557 IPR012156 Cold shock, CspA CH55_2557 IPR012340 Nucleic acid-binding, OB-fold CH55_2557 IPR019844 Cold-shock conserved site CH55_2558 IPR002059 Cold-shock protein, DNA-binding CH55_2558 IPR011129 Cold shock protein CH55_2558 IPR012156 Cold shock, CspA CH55_2558 IPR012340 Nucleic acid-binding, OB-fold CH55_2558 IPR019844 Cold-shock conserved site CH55_2559 IPR002686 Transposase IS200-like CH55_2559 IPR036515 CH55_2559 CH55_256 IPR007439 Chemotaxis phosphatase, CheZ CH55_2560 IPR036869 CH55_2560 CH55_2561 IPR027372 Phytase-like domain CH55_2562 IPR004045 Glutathione S-transferase, N-terminal CH55_2562 IPR036249 CH55_2562 CH55_2562 IPR036282 CH55_2562 CH55_2563 IPR001347 Sugar isomerase (SIS) CH55_2564 IPR000577 CH55_2564 CH55_2564 IPR006003 Carbohydrate kinase, FGGY-related CH55_2564 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_2564 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_2565 IPR001851 ABC transporter, permease CH55_2566 IPR001851 ABC transporter, permease CH55_2567 IPR003439 ABC transporter-like CH55_2567 IPR003593 AAA+ ATPase domain CH55_2567 IPR017871 ABC transporter, conserved site CH55_2567 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2568 IPR025997 Periplasmic binding protein domain CH55_2568 IPR028082 Periplasmic binding protein-like I CH55_2569 IPR004960 Bacterial lipid A biosynthesis acyltransferase CH55_2569 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CH55_2569 IPR030857 CH55_2569 CH55_257 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CH55_257 IPR036365 CH55_257 CH55_257 IPR036366 CH55_257 CH55_257 IPR036505 CH55_257 CH55_2571 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CH55_2571 IPR006153 Cation/H+ exchanger CH55_2572 IPR006043 Xanthine/uracil/vitamin C permease CH55_2573 IPR007337 RelB antitoxin/Antitoxin DinJ CH55_2573 IPR026262 Antitoxin DinJ CH55_2574 IPR003439 ABC transporter-like CH55_2574 IPR003593 AAA+ ATPase domain CH55_2574 IPR017871 ABC transporter, conserved site CH55_2574 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2575 IPR000515 MetI-like domain CH55_2575 IPR035906 CH55_2575 CH55_2576 IPR011251 Luciferase-like domain CH55_2576 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent CH55_2576 IPR036661 CH55_2576 CH55_2577 IPR001638 Extracellular solute-binding protein, family 3 CH55_2577 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates CH55_2577 IPR015168 SsuA/THI5-like CH55_2578 IPR005025 NADPH-dependent FMN reductase-like CH55_2578 IPR020048 NADPH-dependent FMN reductase, SsuE CH55_2578 IPR029039 Flavoprotein-like CH55_2579 IPR002915 DeoC/FbaB/ lacD aldolase CH55_2579 IPR011343 Deoxyribose-phosphate aldolase CH55_2579 IPR013785 Aldolase-type TIM barrel CH55_258 IPR008635 Coiled stalk of trimeric autotransporter adhesin CH55_258 IPR008640 Head domain of trimeric autotransporter adhesin CH55_258 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_2580 IPR002139 Ribokinase CH55_2580 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH55_2580 IPR011611 Carbohydrate kinase PfkB CH55_2580 IPR011877 Ribokinase, bacterial CH55_2580 IPR029056 Ribokinase-like CH55_2581 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CH55_2581 IPR023750 RbsD-like domain CH55_2582 IPR003313 AraC-type arabinose-binding/dimerisation domain CH55_2582 IPR009057 Homeodomain-like CH55_2582 IPR014710 RmlC-like jelly roll fold CH55_2582 IPR018060 DNA binding HTH domain, AraC-type CH55_2582 IPR037923 CH55_2582 CH55_2583 IPR000683 Oxidoreductase, N-terminal CH55_2583 IPR036291 CH55_2583 CH55_2584 IPR013022 Xylose isomerase-like, TIM barrel domain CH55_2584 IPR036237 CH55_2584 CH55_2586 IPR001826 RHS protein CH55_2586 IPR006530 YD repeat CH55_2586 IPR008727 PAAR motif CH55_2586 IPR022385 Rhs repeat-associated core CH55_2586 IPR031325 CH55_2586 CH55_2587 IPR014894 Protein DcrB CH55_2587 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH55_2588 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH55_2588 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH55_2588 IPR037026 CH55_2588 CH55_2589 IPR021069 ImpA, C-terminal CH55_259 IPR005594 YadA-like, C-terminal CH55_259 IPR008635 Coiled stalk of trimeric autotransporter adhesin CH55_259 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_2590 IPR001387 Cro/C1-type helix-turn-helix domain CH55_2590 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2591 IPR014944 Toxin SymE-like CH55_2593 IPR018958 SMI1/KNR4 like domain CH55_2593 IPR037883 CH55_2593 CH55_2594 IPR001826 RHS protein CH55_2594 IPR022385 Rhs repeat-associated core CH55_2595 IPR006530 YD repeat CH55_2595 IPR008727 PAAR motif CH55_2595 IPR031325 CH55_2595 CH55_2596 IPR014894 Protein DcrB CH55_2596 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH55_2597 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH55_2597 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH55_2597 IPR037026 CH55_2597 CH55_2598 IPR021069 ImpA, C-terminal CH55_2599 IPR010657 ImpA, N-terminal CH55_26 IPR032816 CH55_26 CH55_2600 IPR009612 ImcF-related CH55_2600 IPR010623 Domain of unknown function DUF1215 CH55_2600 IPR017731 Type VI secretion system, IcmF CH55_2600 IPR025743 ImcF-related, N-terminal domain CH55_2600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2601 IPR010657 ImpA, N-terminal CH55_2601 IPR017739 Type VI secretion system-associated, VCA0119 CH55_2602 IPR017738 Type VI secretion system-associated, VCA0118 CH55_2603 IPR002197 DNA binding HTH domain, Fis-type CH55_2603 IPR009057 Homeodomain-like CH55_2604 IPR001270 ClpA/B family CH55_2604 IPR003593 AAA+ ATPase domain CH55_2604 IPR003959 ATPase, AAA-type, core CH55_2604 IPR017729 Type VI secretion system, ATPase ClpV1 CH55_2604 IPR018368 ClpA/B, conserved site 1 CH55_2604 IPR019489 Clp ATPase, C-terminal CH55_2604 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2604 IPR028299 ClpA/B, conserved site 2 CH55_2604 IPR036628 CH55_2604 CH55_2605 IPR017732 Type IV / VI secretion system, DotU CH55_2605 IPR038522 CH55_2605 CH55_2606 IPR010263 Protein of unknown function DUF876 CH55_2607 IPR017734 Type VI secretion system, lipoprotein SciN CH55_2607 IPR038706 CH55_2607 CH55_2608 IPR008984 SMAD/FHA domain CH55_2608 IPR017735 Type VI secretion system, FHA domain-containing protein CH55_2609 IPR010732 Protein of unknown function DUF1305 CH55_2610 IPR010272 Type VI secretion system, VCA0110 CH55_2611 IPR009057 Homeodomain-like CH55_2611 IPR010921 Trp repressor/replication initiator CH55_2612 IPR001584 Integrase, catalytic core CH55_2612 IPR012337 Ribonuclease H-like domain CH55_2612 IPR025948 HTH-like domain CH55_2612 IPR036397 CH55_2612 CH55_2613 IPR010351 Protein of unknown function DUF943 CH55_2615 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CH55_2615 IPR006076 FAD dependent oxidoreductase CH55_2615 IPR031656 CH55_2615 CH55_2615 IPR036188 CH55_2615 CH55_2615 IPR038299 CH55_2615 CH55_2616 IPR000811 Glycosyl transferase, family 35 CH55_2616 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CH55_2616 IPR035090 CH55_2616 CH55_2617 IPR001296 Glycosyl transferase, family 1 CH55_2617 IPR011835 Glycogen/starch synthase, ADP-glucose type CH55_2617 IPR013534 Starch synthase, catalytic domain CH55_2618 IPR013534 Starch synthase, catalytic domain CH55_2619 IPR005835 Nucleotidyl transferase CH55_2619 IPR005836 ADP-glucose pyrophosphorylase, conserved site CH55_2619 IPR011004 Trimeric LpxA-like CH55_2619 IPR011831 Glucose-1-phosphate adenylyltransferase CH55_2619 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CH55_2619 IPR029044 Nucleotide-diphospho-sugar transferases CH55_262 IPR000821 Alanine racemase CH55_262 IPR001608 Alanine racemase, N-terminal CH55_262 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH55_262 IPR011079 Alanine racemase, C-terminal CH55_262 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CH55_262 IPR029066 PLP-binding barrel CH55_2620 IPR004193 Glycoside hydrolase, family 13, N-terminal CH55_2620 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH55_2620 IPR011837 Glycogen debranching enzyme, GlgX type CH55_2620 IPR013780 Glycosyl hydrolase, family 13, all-beta CH55_2620 IPR013783 Immunoglobulin-like fold CH55_2620 IPR014756 Immunoglobulin E-set CH55_2620 IPR017853 Glycoside hydrolase, superfamily CH55_2620 IPR022844 Glycogen debranching enzyme, bacterial CH55_2621 IPR004193 Glycoside hydrolase, family 13, N-terminal CH55_2621 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH55_2621 IPR006048 Alpha-amylase, C-terminal all beta CH55_2621 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CH55_2621 IPR013780 Glycosyl hydrolase, family 13, all-beta CH55_2621 IPR013783 Immunoglobulin-like fold CH55_2621 IPR014756 Immunoglobulin E-set CH55_2621 IPR017853 Glycoside hydrolase, superfamily CH55_2621 IPR037439 CH55_2621 CH55_2622 IPR010559 Signal transduction histidine kinase, internal region CH55_2622 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CH55_2622 IPR036890 CH55_2622 CH55_2623 IPR003344 Bacterial Ig-like, group 1 CH55_2623 IPR003535 Intimin/invasin bacterial adhesion mediator protein CH55_2623 IPR008964 Invasin/intimin cell-adhesion CH55_2623 IPR013783 Immunoglobulin-like fold CH55_2623 IPR018392 LysM domain CH55_2623 IPR024519 Domain of unknown function DUF3442, intimin/invasin CH55_2623 IPR036779 CH55_2623 CH55_2623 IPR038177 CH55_2623 CH55_2628 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CH55_2628 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH55_2628 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CH55_2628 IPR012080 Aspartate-semialdehyde dehydrogenase CH55_2628 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CH55_2628 IPR036291 CH55_2628 CH55_2629 IPR002771 Multiple antibiotic resistance (MarC)-related CH55_2633 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CH55_2633 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2633 IPR031322 CH55_2633 CH55_2634 IPR003474 Gluconate transporter CH55_2635 IPR000843 Transcription regulator HTH, LacI CH55_2635 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH55_2635 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2635 IPR028082 Periplasmic binding protein-like I CH55_2636 IPR003829 Pirin, N-terminal domain CH55_2636 IPR011051 RmlC-like cupin domain CH55_2636 IPR012093 Pirin CH55_2636 IPR014710 RmlC-like jelly roll fold CH55_2638 IPR001789 Signal transduction response regulator, receiver domain CH55_2638 IPR001867 Signal transduction response regulator, C-terminal CH55_2638 IPR011006 CheY-like superfamily CH55_2638 IPR016032 Signal transduction response regulator, C-terminal effector CH55_2638 IPR036388 CH55_2638 CH55_2639 IPR011611 Carbohydrate kinase PfkB CH55_2639 IPR029056 Ribokinase-like CH55_2640 IPR000771 Ketose-bisphosphate aldolase, class-II CH55_2640 IPR013785 Aldolase-type TIM barrel CH55_2641 IPR010864 Protein of unknown function DUF1498 CH55_2641 IPR011051 RmlC-like cupin domain CH55_2641 IPR014710 RmlC-like jelly roll fold CH55_2642 IPR025997 Periplasmic binding protein domain CH55_2642 IPR028082 Periplasmic binding protein-like I CH55_2643 IPR001851 ABC transporter, permease CH55_2644 IPR003439 ABC transporter-like CH55_2644 IPR003593 AAA+ ATPase domain CH55_2644 IPR017871 ABC transporter, conserved site CH55_2644 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2645 IPR001789 Signal transduction response regulator, receiver domain CH55_2645 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_2645 IPR003660 HAMP linker domain CH55_2645 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_2645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_2645 IPR011006 CheY-like superfamily CH55_2645 IPR035965 CH55_2645 CH55_2645 IPR036097 CH55_2645 CH55_2645 IPR036890 CH55_2645 CH55_2646 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CH55_2646 IPR023166 HI0933 insert-like domain CH55_2646 IPR036188 CH55_2646 CH55_2647 IPR001204 Phosphate transporter CH55_2648 IPR002686 Transposase IS200-like CH55_2648 IPR036515 CH55_2648 CH55_2649 IPR019598 Universal stress protein B CH55_265 IPR002641 Patatin/Phospholipase A2-related CH55_265 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CH55_2650 IPR006015 Universal stress protein A CH55_2650 IPR006016 UspA CH55_2650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_2651 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CH55_2651 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CH55_2651 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CH55_2651 IPR014362 Glutamate dehydrogenase CH55_2651 IPR033524 CH55_2651 CH55_2651 IPR036291 CH55_2651 CH55_2652 IPR006026 Peptidase, metallopeptidase CH55_2652 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_2652 IPR013858 Peptidase M10 serralysin C-terminal domain CH55_2652 IPR016294 Peptidase M10B CH55_2652 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CH55_2652 IPR024079 Metallopeptidase, catalytic domain CH55_2653 IPR007536 Ribosomal RNA small subunit methyltransferase J CH55_2653 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2654 IPR001567 Peptidase M3A/M3B CH55_2654 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CH55_2655 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_2655 IPR007473 Ribosomal RNA large subunit methyltransferase J CH55_2655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2656 IPR001100 CH55_2656 CH55_2656 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH55_2656 IPR006322 Glutathione reductase, eukaryote/bacterial CH55_2656 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CH55_2656 IPR016156 FAD/NAD-linked reductase, dimerisation domain CH55_2656 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_2656 IPR036188 CH55_2656 CH55_2657 IPR008599 Putative sugar diacid recognition CH55_2657 IPR025736 PucR C-terminal helix-turn-helix domain CH55_2658 IPR003474 Gluconate transporter CH55_2659 IPR004381 Glycerate kinase CH55_2659 IPR018193 Glycerate kinase, flavodoxin-like domain CH55_2659 IPR018197 Glycerate kinase, restriction-enzyme-like fold CH55_2659 IPR036129 CH55_2659 CH55_2660 IPR010351 Protein of unknown function DUF943 CH55_2661 IPR010351 Protein of unknown function DUF943 CH55_2662 IPR017483 Conserved hypothetical protein CHP03034 CH55_2663 IPR004899 Pertactin, central region CH55_2663 IPR005546 Autotransporter beta-domain CH55_2663 IPR006315 Outer membrane autotransporter barrel CH55_2663 IPR011050 Pectin lyase fold/virulence factor CH55_2663 IPR012332 P22 tailspike C-terminal domain-like CH55_2663 IPR036709 CH55_2663 CH55_2664 IPR005274 Inner membrane protein YhjD CH55_2664 IPR017039 Virulence factor BrkB CH55_2665 IPR032712 CH55_2665 CH55_2666 IPR003763 CDP-diacylglycerol pyrophosphatase CH55_2666 IPR036265 CH55_2666 CH55_2666 IPR038433 CH55_2666 CH55_2667 IPR007844 AsmA CH55_2668 IPR001633 EAL domain CH55_2668 IPR035919 CH55_2668 CH55_2669 IPR004370 4-oxalocrotonate tautomerase CH55_2669 IPR014347 Tautomerase/MIF superfamily CH55_2669 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CH55_2670 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH55_2670 IPR011611 Carbohydrate kinase PfkB CH55_2670 IPR029056 Ribokinase-like CH55_2671 IPR007863 Peptidase M16, C-terminal domain CH55_2671 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CH55_2671 IPR011765 Peptidase M16, N-terminal CH55_2672 IPR001991 Sodium:dicarboxylate symporter CH55_2672 IPR018107 Sodium:dicarboxylate symporter, conserved site CH55_2672 IPR023954 C4-dicarboxylate transport protein CH55_2672 IPR036458 CH55_2672 CH55_2673 IPR000421 Coagulation factor 5/8 C-terminal type domain CH55_2673 IPR008979 Galactose-binding domain-like CH55_2674 IPR010702 Periplasmic pectate lyase CH55_2675 IPR009331 Oligogalacturonate-specific porin CH55_2676 IPR000160 GGDEF domain CH55_2676 IPR001633 EAL domain CH55_2676 IPR029787 Nucleotide cyclase CH55_2676 IPR033419 CH55_2676 CH55_2676 IPR035919 CH55_2676 CH55_2677 IPR002037 Glycoside hydrolase, family 8 CH55_2677 IPR008928 Six-hairpin glycosidase-like CH55_2677 IPR012341 Six-hairpin glycosidase CH55_2678 IPR003439 ABC transporter-like CH55_2678 IPR003593 AAA+ ATPase domain CH55_2678 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH55_2678 IPR017871 ABC transporter, conserved site CH55_2678 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2679 IPR003439 ABC transporter-like CH55_2679 IPR003593 AAA+ ATPase domain CH55_2679 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH55_2679 IPR017871 ABC transporter, conserved site CH55_2679 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_268 IPR001270 ClpA/B family CH55_268 IPR002611 IstB-like ATP-binding protein CH55_268 IPR003593 AAA+ ATPase domain CH55_268 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2680 IPR000515 MetI-like domain CH55_2680 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH55_2680 IPR035906 CH55_2680 CH55_2681 IPR000515 MetI-like domain CH55_2681 IPR035906 CH55_2681 CH55_2682 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_2682 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CH55_2682 IPR030678 CH55_2682 CH55_2684 IPR005565 Haemolysin activator HlyB CH55_2684 IPR013686 Polypeptide-transport-associated, ShlB-type CH55_2684 IPR027282 Two partner secretion pathway transporter CH55_2684 IPR035251 CH55_2684 CH55_2685 IPR008638 Filamentous haemagglutinin, N-terminal CH55_2685 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CH55_2685 IPR011050 Pectin lyase fold/virulence factor CH55_2685 IPR012334 Pectin lyase fold CH55_2686 IPR002686 Transposase IS200-like CH55_2686 IPR036515 CH55_2686 CH55_2688 IPR000849 Sugar phosphate transporter CH55_2688 IPR011701 Major facilitator superfamily CH55_2688 IPR036259 CH55_2688 CH55_2689 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_2689 IPR007895 MASE1 CH55_2689 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CH55_2689 IPR036890 CH55_2689 CH55_2690 IPR000792 Transcription regulator LuxR, C-terminal CH55_2690 IPR001789 Signal transduction response regulator, receiver domain CH55_2690 IPR011006 CheY-like superfamily CH55_2690 IPR016032 Signal transduction response regulator, C-terminal effector CH55_2691 IPR000917 Sulfatase CH55_2691 IPR012549 Domain of unknown function DUF1705 CH55_2691 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_2691 IPR017850 Alkaline-phosphatase-like, core domain CH55_2692 IPR022742 Putative lysophospholipase CH55_2692 IPR029058 Alpha/Beta hydrolase fold CH55_2693 IPR002293 Amino acid/polyamine transporter I CH55_2693 IPR004840 Amino acid permease, conserved site CH55_2693 IPR004841 Amino acid permease/ SLC12A domain CH55_2694 IPR001106 Aromatic amino acid lyase CH55_2694 IPR005921 Histidine ammonia-lyase CH55_2694 IPR008948 L-Aspartase-like CH55_2694 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CH55_2694 IPR024083 Fumarase/histidase, N-terminal CH55_2695 IPR023636 Urocanase conserved site CH55_2695 IPR023637 Urocanase CH55_2695 IPR035085 CH55_2695 CH55_2695 IPR035400 CH55_2695 CH55_2695 IPR035401 CH55_2695 CH55_2695 IPR036190 CH55_2695 CH55_2695 IPR038364 CH55_2695 CH55_2696 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_2696 IPR036052 CH55_2696 CH55_2697 IPR000836 Phosphoribosyltransferase domain CH55_2697 IPR029057 Phosphoribosyltransferase-like CH55_2698 IPR000620 Drug/metabolite transporter CH55_27 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CH55_27 IPR029045 ClpP/crotonase-like domain CH55_27 IPR034733 CH55_27 CH55_270 IPR001584 Integrase, catalytic core CH55_270 IPR006120 Resolvase, HTH domain CH55_270 IPR009057 Homeodomain-like CH55_270 IPR012337 Ribonuclease H-like domain CH55_2700 IPR002491 ABC transporter periplasmic binding domain CH55_2701 IPR000522 ABC transporter, permease protein CH55_2701 IPR037294 CH55_2701 CH55_2702 IPR000522 ABC transporter, permease protein CH55_2702 IPR037294 CH55_2702 CH55_2703 IPR011204 Virulence protein RhuM-like CH55_2704 IPR003439 ABC transporter-like CH55_2704 IPR003593 AAA+ ATPase domain CH55_2704 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2706 IPR001387 Cro/C1-type helix-turn-helix domain CH55_2706 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2707 IPR025668 Transposase DDE domain CH55_2709 IPR007684 Zinc finger, Ogr/Delta-type CH55_271 IPR001670 Alcohol dehydrogenase, iron-type CH55_271 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase CH55_271 IPR015590 Aldehyde dehydrogenase domain CH55_271 IPR016161 Aldehyde/histidinol dehydrogenase CH55_271 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_271 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_271 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH55_2711 IPR002104 Integrase, catalytic CH55_2711 IPR010998 Integrase, Lambda-type, N-terminal CH55_2711 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_2711 IPR013762 Integrase-like, catalytic core CH55_2711 IPR025166 Domain of unknown function DUF4102 CH55_2711 IPR038488 CH55_2711 CH55_2713 IPR009057 Homeodomain-like CH55_2713 IPR018060 DNA binding HTH domain, AraC-type CH55_2713 IPR018062 HTH domain AraC-type, conserved site CH55_2713 IPR020449 Transcription regulator HTH, AraC- type CH55_2713 IPR028082 Periplasmic binding protein-like I CH55_2714 IPR001851 ABC transporter, permease CH55_2715 IPR003439 ABC transporter-like CH55_2715 IPR003593 AAA+ ATPase domain CH55_2715 IPR013455 ABC transporter, D-xylose, ATP-binding protein CH55_2715 IPR017871 ABC transporter, conserved site CH55_2715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2716 IPR013456 D-xylose ABC transporter, substrate-binding protein CH55_2716 IPR025997 Periplasmic binding protein domain CH55_2716 IPR028082 Periplasmic binding protein-like I CH55_2717 IPR001998 Xylose isomerase CH55_2717 IPR013452 Xylose isomerase, bacterial-type CH55_2717 IPR036237 CH55_2717 CH55_2718 IPR000577 CH55_2718 CH55_2718 IPR006000 Xylulokinase CH55_2718 IPR018483 Carbohydrate kinase, FGGY, conserved site CH55_2718 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_2718 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_2719 IPR000259 Fimbrial-type adhesion domain CH55_2719 IPR008966 Adhesion domain CH55_2719 IPR036937 CH55_2719 CH55_272 IPR002771 Multiple antibiotic resistance (MarC)-related CH55_2720 IPR001829 Pili assembly chaperone, bacterial CH55_2720 IPR008962 PapD-like CH55_2720 IPR013783 Immunoglobulin-like fold CH55_2720 IPR016147 PapD, N-terminal, bacterial CH55_2720 IPR016148 Pili assembly chaperone, C-terminal domain CH55_2720 IPR018046 Pili assembly chaperone, conserved site CH55_2720 IPR036316 CH55_2720 CH55_2721 IPR000015 Outer membrane usher protein CH55_2721 IPR025949 PapC-like, C-terminal domain CH55_2722 IPR000015 Outer membrane usher protein CH55_2722 IPR018030 Fimbrial membrane usher, conserved site CH55_2722 IPR025885 PapC, N-terminal domain CH55_2722 IPR037224 CH55_2722 CH55_2723 IPR000259 Fimbrial-type adhesion domain CH55_2723 IPR008966 Adhesion domain CH55_2723 IPR036937 CH55_2723 CH55_2724 IPR002656 Acyltransferase 3 CH55_2724 IPR032905 CH55_2724 CH55_2725 IPR009057 Homeodomain-like CH55_2725 IPR010921 Trp repressor/replication initiator CH55_2726 IPR001584 Integrase, catalytic core CH55_2726 IPR012337 Ribonuclease H-like domain CH55_2726 IPR025948 HTH-like domain CH55_2726 IPR036397 CH55_2726 CH55_2727 IPR011701 Major facilitator superfamily CH55_2727 IPR036259 CH55_2727 CH55_273 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_273 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CH55_273 IPR030678 CH55_273 CH55_2730 IPR025320 Protein of unknown function DUF4225 CH55_2732 IPR002513 Tn3 transposase DDE domain CH55_2733 IPR004535 Translation elongation factor, selenocysteine-specific CH55_2733 IPR009000 Translation protein, beta-barrel domain CH55_2733 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH55_2733 IPR015190 Translation elongation factor SelB, winged helix, type 2 CH55_2733 IPR015191 Translation elongation factor SelB, winged helix, type 3 CH55_2733 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2733 IPR036388 CH55_2733 CH55_2733 IPR036390 CH55_2733 CH55_2734 IPR000795 Elongation factor, GTP-binding domain CH55_2734 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2734 IPR031157 CH55_2734 CH55_2735 IPR004534 L-seryl-tRNA selenium transferase CH55_2735 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_2735 IPR015424 Pyridoxal phosphate-dependent transferase CH55_2735 IPR018319 L-seryl-tRNA selenium transferase-like CH55_2735 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CH55_2736 IPR006452 Formate dehydrogenase accessory protein CH55_2736 IPR024064 FdhE-like CH55_2737 IPR006471 Formate dehydrogenase, gamma subunit CH55_2737 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CH55_2737 IPR016174 Di-haem cytochrome, transmembrane CH55_2738 IPR006470 Formate dehydrogenase, beta subunit CH55_2738 IPR014603 Formate dehydrogenase, iron-sulphur subunit CH55_2738 IPR015246 Formate dehydrogenase, transmembrane CH55_2738 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_2738 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_2738 IPR038384 CH55_2738 CH55_2739 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic CH55_2739 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH55_2739 IPR006656 Molybdopterin oxidoreductase CH55_2739 IPR006657 Molydopterin dinucleotide-binding domain CH55_2739 IPR009010 Aspartate decarboxylase-like domain CH55_274 IPR000515 MetI-like domain CH55_274 IPR035906 CH55_274 CH55_2740 IPR006656 Molybdopterin oxidoreductase CH55_2740 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH55_2740 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH55_2741 IPR003786 Protein FdhD CH55_2741 IPR016193 Cytidine deaminase-like CH55_2742 IPR001189 Manganese/iron superoxide dismutase CH55_2742 IPR019831 Manganese/iron superoxide dismutase, N-terminal CH55_2742 IPR019832 Manganese/iron superoxide dismutase, C-terminal CH55_2742 IPR019833 Manganese/iron superoxide dismutase, binding site CH55_2742 IPR036314 CH55_2742 CH55_2742 IPR036324 CH55_2742 CH55_2743 IPR003660 HAMP linker domain CH55_2743 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_2743 IPR004090 Chemotaxis methyl-accepting receptor CH55_2743 IPR032255 CH55_2743 CH55_2746 IPR019545 DM13 domain CH55_2747 IPR021230 Protein of unknown function DUF2810 CH55_2749 IPR007761 Mannitol repressor CH55_2749 IPR038026 CH55_2749 CH55_275 IPR000515 MetI-like domain CH55_275 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH55_275 IPR035906 CH55_275 CH55_2750 IPR000669 Mannitol dehydrogenase CH55_2750 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_2750 IPR013118 Mannitol dehydrogenase, C-terminal CH55_2750 IPR013131 Mannitol dehydrogenase, N-terminal CH55_2750 IPR013328 Dehydrogenase, multihelical CH55_2750 IPR023027 Mannitol dehydrogenase, conserved site CH55_2750 IPR023028 Mannitol-1-phosphate 5-dehydrogenase CH55_2750 IPR036291 CH55_2750 CH55_2751 IPR002178 PTS EIIA type-2 domain CH55_2751 IPR003352 Phosphotransferase system, EIIC CH55_2751 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH55_2751 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC CH55_2751 IPR016152 Phosphotransferase/anion transporter CH55_2751 IPR036095 CH55_2751 CH55_2752 IPR021413 Protein of unknown function DUF3053 CH55_2753 IPR008909 DALR anticodon binding CH55_2753 IPR015944 Glycine-tRNA ligase, beta subunit CH55_2754 IPR002310 Glycine-tRNA ligase, alpha subunit CH55_2756 IPR004597 DNA-3-methyladenine glycosylase I CH55_2756 IPR005019 Methyladenine glycosylase CH55_2756 IPR011257 DNA glycosylase CH55_2757 IPR000182 GNAT domain CH55_2757 IPR016181 Acyl-CoA N-acyltransferase CH55_2758 IPR006664 Outer membrane protein, bacterial CH55_2758 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_2758 IPR036737 CH55_2758 CH55_2758 IPR039567 CH55_2758 CH55_2759 IPR036388 CH55_2759 CH55_2759 IPR036390 CH55_2759 CH55_276 IPR003439 ABC transporter-like CH55_276 IPR003593 AAA+ ATPase domain CH55_276 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH55_276 IPR017871 ABC transporter, conserved site CH55_276 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2760 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH55_2760 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH55_2760 IPR023756 Glyoxylate/hydroxypyruvate reductase B CH55_2760 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH55_2760 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH55_2760 IPR036291 CH55_2760 CH55_2761 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CH55_2761 IPR014635 Alpha-amylase, MalS type CH55_2761 IPR017853 Glycoside hydrolase, superfamily CH55_2763 IPR004839 Aminotransferase, class I/classII CH55_2763 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_2763 IPR015424 Pyridoxal phosphate-dependent transferase CH55_2764 IPR006037 Regulator of K+ conductance, C-terminal CH55_2764 IPR006512 YidE/YbjL duplication CH55_2764 IPR023018 Transport protein YidE, putative CH55_2764 IPR036721 CH55_2764 CH55_2765 IPR002068 Alpha crystallin/Hsp20 domain CH55_2765 IPR008978 HSP20-like chaperone CH55_2765 IPR022848 Small heat shock protein IbpB CH55_2766 IPR002068 Alpha crystallin/Hsp20 domain CH55_2766 IPR008978 HSP20-like chaperone CH55_2766 IPR023728 Small heat shock protein IbpA CH55_2767 IPR010780 Protein of unknown function DUF1375 CH55_2768 IPR011042 Six-bladed beta-propeller, TolB-like CH55_2768 IPR011659 WD40-like Beta Propeller CH55_277 IPR003439 ABC transporter-like CH55_277 IPR003593 AAA+ ATPase domain CH55_277 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH55_277 IPR017871 ABC transporter, conserved site CH55_277 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2770 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH55_2770 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_2770 IPR036052 CH55_2770 CH55_2771 IPR003462 Ornithine cyclodeaminase/mu-crystallin CH55_2771 IPR023401 Ornithine cyclodeaminase, N-terminal CH55_2771 IPR036291 CH55_2771 CH55_2772 IPR009057 Homeodomain-like CH55_2772 IPR010921 Trp repressor/replication initiator CH55_2774 IPR001584 Integrase, catalytic core CH55_2774 IPR012337 Ribonuclease H-like domain CH55_2774 IPR025948 HTH-like domain CH55_2774 IPR036397 CH55_2774 CH55_2775 IPR000150 Cof protein CH55_2775 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH55_2775 IPR023214 HAD-like domain CH55_2775 IPR036412 CH55_2775 CH55_2776 IPR000565 DNA topoisomerase, type IIA, subunit B CH55_2776 IPR001241 DNA topoisomerase, type IIA CH55_2776 IPR002288 DNA gyrase B subunit, C-terminal CH55_2776 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_2776 IPR006171 Toprim domain CH55_2776 IPR011557 DNA gyrase, subunit B CH55_2776 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CH55_2776 IPR013759 DNA topoisomerase, type IIA, central domain CH55_2776 IPR013760 DNA topoisomerase, type IIA-like domain CH55_2776 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2776 IPR018522 DNA topoisomerase, type IIA, conserved site CH55_2776 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2776 IPR036890 CH55_2776 CH55_2777 IPR001238 DNA-binding, RecF CH55_2777 IPR003395 RecF/RecN/SMC, N-terminal CH55_2777 IPR018078 DNA-binding, RecF, conserved site CH55_2777 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2778 IPR001001 DNA polymerase III, beta chain CH55_2778 IPR022634 DNA polymerase III, beta chain, N-terminal CH55_2778 IPR022635 DNA polymerase III, beta chain, C-terminal CH55_2778 IPR022637 DNA polymerase III, beta chain, central CH55_2779 IPR001957 Chromosomal replication control, initiator DnaA CH55_2779 IPR003593 AAA+ ATPase domain CH55_2779 IPR010921 Trp repressor/replication initiator CH55_2779 IPR013159 Chromosomal replication initiator, DnaA C-terminal CH55_2779 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CH55_2779 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CH55_2779 IPR020591 Chromosomal replication control, initiator DnaA-like CH55_2779 IPR024633 DnaA N-terminal domain CH55_2779 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2779 IPR038454 CH55_2779 CH55_2781 IPR000271 Ribosomal protein L34 CH55_2781 IPR020939 Ribosomal protein L34, conserved site CH55_2782 IPR000100 Ribonuclease P CH55_2782 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2782 IPR020539 Ribonuclease P, conserved site CH55_2782 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2783 IPR002696 Putative membrane protein insertion efficiency factor CH55_2784 IPR001708 Membrane insertase OXA1/ALB3/YidC CH55_2784 IPR019998 Membrane insertase YidC CH55_2784 IPR028053 Membrane insertase YidC, N-terminal CH55_2784 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CH55_2784 IPR038210 CH55_2784 CH55_2784 IPR038221 CH55_2784 CH55_2785 IPR004520 tRNA modification GTPase MnmE CH55_2785 IPR005225 Small GTP-binding protein domain CH55_2785 IPR006073 GTP binding domain CH55_2785 IPR018948 GTP-binding protein TrmE, N-terminal CH55_2785 IPR025867 tRNA modification GTPase MnmE C-terminal domain CH55_2785 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CH55_2785 IPR027368 tRNA modification GTPase MnmE domain 2 CH55_2785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2786 IPR010758 Trans-2-enoyl-CoA reductase CH55_2786 IPR024906 Enoyl reductase FAD binding domain CH55_2786 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative CH55_2789 IPR006043 Xanthine/uracil/vitamin C permease CH55_2789 IPR026033 Purine permease PbuG-like CH55_279 IPR007376 dsDNA mimic, putative CH55_279 IPR036763 CH55_279 CH55_2790 IPR006439 HAD hydrolase, subfamily IA CH55_2790 IPR023198 Phosphoglycolate phosphatase, domain 2 CH55_2790 IPR023214 HAD-like domain CH55_2790 IPR036412 CH55_2790 CH55_2791 IPR000515 MetI-like domain CH55_2791 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_2791 IPR035906 CH55_2791 CH55_2792 IPR000515 MetI-like domain CH55_2792 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_2792 IPR035906 CH55_2792 CH55_2793 IPR001638 Extracellular solute-binding protein, family 3 CH55_2793 IPR018313 Extracellular solute-binding protein, family 3, conserved site CH55_2794 IPR007607 Protein of unknown function DUF583 CH55_2795 IPR026022 PhoU domain CH55_2795 IPR028366 Phosphate transport system protein PhoU CH55_2795 IPR038078 CH55_2795 CH55_2796 IPR003439 ABC transporter-like CH55_2796 IPR003593 AAA+ ATPase domain CH55_2796 IPR005670 Phosphate transport system permease protein 1 CH55_2796 IPR017871 ABC transporter, conserved site CH55_2796 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2797 IPR000515 MetI-like domain CH55_2797 IPR005672 Phosphate transport system permease protein PstA CH55_2797 IPR035906 CH55_2797 CH55_2798 IPR000515 MetI-like domain CH55_2798 IPR011864 Phosphate ABC transporter, permease protein PstC CH55_2798 IPR035906 CH55_2798 CH55_2799 IPR005673 ABC transporter, phosphate-binding protein PstS CH55_2799 IPR024370 PBP domain CH55_28 IPR001645 Folylpolyglutamate synthetase CH55_28 IPR004101 Mur ligase, C-terminal CH55_28 IPR013221 Mur ligase, central CH55_28 IPR018109 Folylpolyglutamate synthetase, conserved site CH55_28 IPR036565 CH55_28 CH55_28 IPR036615 CH55_28 CH55_280 IPR001736 Phospholipase D/Transphosphatidylase CH55_280 IPR022924 Cardiolipin synthase CH55_280 IPR025202 Phospholipase D-like domain CH55_280 IPR027379 Cardiolipin synthase N-terminal CH55_280 IPR030840 CH55_280 CH55_2800 IPR001347 Sugar isomerase (SIS) CH55_2800 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CH55_2800 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_2801 IPR001451 Bacterial transferase hexapeptide repeat CH55_2801 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CH55_2801 IPR011004 Trimeric LpxA-like CH55_2801 IPR018357 Hexapeptide transferase, conserved site CH55_2801 IPR025877 MobA-like NTP transferase domain CH55_2801 IPR029044 Nucleotide-diphospho-sugar transferases CH55_2802 IPR001469 ATPase, F1 complex, delta/epsilon subunit CH55_2802 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal CH55_2802 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain CH55_2802 IPR036771 CH55_2802 CH55_2802 IPR036794 CH55_2802 CH55_2803 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_2803 IPR003593 AAA+ ATPase domain CH55_2803 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CH55_2803 IPR005722 ATPase, F1 complex, beta subunit CH55_2803 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH55_2803 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal CH55_2803 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2803 IPR036121 CH55_2803 CH55_2804 IPR000131 ATPase, F1 complex, gamma subunit CH55_2804 IPR023632 ATPase, F1 complex, gamma subunit conserved site CH55_2804 IPR035968 CH55_2804 CH55_2805 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_2805 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CH55_2805 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CH55_2805 IPR005294 ATPase, F1 complex, alpha subunit CH55_2805 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH55_2805 IPR023366 ATP synthase subunit alpha-like domain CH55_2805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2805 IPR036121 CH55_2805 CH55_2805 IPR038376 CH55_2805 CH55_2806 IPR000711 ATPase, OSCP/delta subunit CH55_2806 IPR020781 ATPase, OSCP/delta subunit, conserved site CH55_2806 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CH55_2807 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast CH55_2807 IPR005864 ATPase, F0 complex, subunit B, bacterial CH55_2807 IPR028987 F-type ATP synthase subunit B-like, membrane domain CH55_2808 IPR000454 ATPase, F0 complex, subunit C CH55_2808 IPR002379 V-ATPase proteolipid subunit C-like domain CH55_2808 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast CH55_2808 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CH55_2808 IPR035921 CH55_2808 CH55_2808 IPR038662 CH55_2808 CH55_2809 IPR000568 ATPase, F0 complex, subunit A CH55_2809 IPR023011 ATPase, F0 complex, subunit A, active site CH55_2809 IPR035908 CH55_2809 CH55_281 IPR000758 Virulence-related outer membrane protein CH55_281 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_281 IPR027385 Outer membrane protein beta-barrel CH55_2810 IPR005598 ATP synthase protein I CH55_2811 IPR003682 rRNA small subunit methyltransferase G CH55_2811 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2812 IPR002218 Glucose-inhibited division protein A-related CH55_2812 IPR004416 Glucose-inhibited division protein A CH55_2812 IPR020595 Glucose-inhibited division protein A-related, conserved site CH55_2812 IPR026904 GidA associated domain 3 CH55_2812 IPR036188 CH55_2812 CH55_2813 IPR001094 Flavodoxin CH55_2813 IPR008254 Flavodoxin/nitric oxide synthase CH55_2813 IPR029039 Flavoprotein-like CH55_2814 IPR000485 AsnC-type HTH domain CH55_2814 IPR011008 Dimeric alpha-beta barrel CH55_2814 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CH55_2814 IPR019887 Transcription regulator AsnC-type, C-terminal CH55_2814 IPR019888 Transcription regulator AsnC-type CH55_2814 IPR036388 CH55_2814 CH55_2814 IPR036390 CH55_2814 CH55_2815 IPR004618 Aspartate--ammonia ligase CH55_2816 IPR002035 von Willebrand factor, type A CH55_2816 IPR008912 Uncharacterised protein family CoxE-like CH55_2816 IPR023481 Uncharacterised protein family ViaA CH55_2816 IPR036465 CH55_2816 CH55_2817 IPR003593 AAA+ ATPase domain CH55_2817 IPR011704 ATPase, dynein-related, AAA domain CH55_2817 IPR022547 ATPase, RavA, C-terminal CH55_2817 IPR023671 ATPase RavA CH55_2817 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2818 IPR003855 K+ potassium transporter CH55_2818 IPR023051 Potassium uptake protein, low affinity, Kup CH55_2819 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CH55_2819 IPR023064 D-ribose pyranase CH55_2819 IPR023750 RbsD-like domain CH55_2820 IPR002139 Ribokinase CH55_2820 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CH55_2820 IPR011611 Carbohydrate kinase PfkB CH55_2820 IPR011877 Ribokinase, bacterial CH55_2820 IPR029056 Ribokinase-like CH55_2821 IPR004638 Drug resistance transporter EmrB/QacA subfamily CH55_2821 IPR011701 Major facilitator superfamily CH55_2821 IPR036259 CH55_2821 CH55_2823 IPR000524 Transcription regulator HTH, GntR CH55_2823 IPR008920 Transcription regulator FadR/GntR, C-terminal CH55_2823 IPR011711 GntR, C-terminal CH55_2823 IPR036388 CH55_2823 CH55_2823 IPR036390 CH55_2823 CH55_283 IPR027392 Transcription factor zinc-finger CH55_2832 IPR005697 Homoserine O-succinyltransferase CH55_2832 IPR029062 Class I glutamine amidotransferase-like CH55_2832 IPR033752 CH55_2832 CH55_2833 IPR001465 Malate synthase CH55_2833 IPR006252 Malate synthase A CH55_2833 IPR011076 Malate synthase-like CH55_2834 IPR006254 Isocitrate lyase CH55_2834 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_2834 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CH55_2835 IPR010452 Isocitrate dehydrogenase kinasephosphatase CH55_2836 IPR014757 Transcription regulator IclR, C-terminal CH55_2836 IPR029016 GAF domain-like CH55_2837 IPR005471 Transcription regulator IclR, N-terminal CH55_2837 IPR036388 CH55_2837 CH55_2837 IPR036390 CH55_2837 CH55_2838 IPR000489 Pterin-binding CH55_2838 IPR003726 Homocysteine S-methyltransferase CH55_2838 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CH55_2838 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CH55_2838 IPR006158 Cobalamin (vitamin B12)-binding domain CH55_2838 IPR011005 Dihydropteroate synthase-like CH55_2838 IPR011822 Cobalamin-dependent methionine synthase CH55_2838 IPR036589 CH55_2838 CH55_2838 IPR036594 CH55_2838 CH55_2838 IPR036724 CH55_2838 CH55_2838 IPR037010 CH55_2838 CH55_2839 IPR008638 Filamentous haemagglutinin, N-terminal CH55_2839 IPR011050 Pectin lyase fold/virulence factor CH55_2839 IPR012334 Pectin lyase fold CH55_2839 IPR025157 Haemagluttinin repeat CH55_284 IPR005545 YCII-related CH55_284 IPR011008 Dimeric alpha-beta barrel CH55_2840 IPR005565 Haemolysin activator HlyB CH55_2840 IPR013686 Polypeptide-transport-associated, ShlB-type CH55_2840 IPR027282 Two partner secretion pathway transporter CH55_2840 IPR035251 CH55_2840 CH55_2841 IPR001048 Aspartate/glutamate/uridylate kinase CH55_2841 IPR001341 Aspartate kinase domain CH55_2841 IPR005260 Aspartate kinase, monofunctional class CH55_2841 IPR018042 Aspartate kinase, conserved site CH55_2841 IPR036393 CH55_2841 CH55_2842 IPR001672 Phosphoglucose isomerase (PGI) CH55_2842 IPR018189 Phosphoglucose isomerase, conserved site CH55_2842 IPR023096 Phosphoglucose isomerase, C-terminal CH55_2843 IPR009315 Phosphate-starvation-induced PsiE CH55_2843 IPR020948 Phosphate-starvation-induced PsiE-like CH55_2844 IPR000515 MetI-like domain CH55_2844 IPR035906 CH55_2844 CH55_2845 IPR000515 MetI-like domain CH55_2845 IPR029345 Maltose transport system permease protein MalF, P2 domain CH55_2845 IPR035277 CH55_2845 CH55_2845 IPR035906 CH55_2845 CH55_2846 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_2846 IPR006060 Maltose binding protein CH55_2846 IPR006061 Bacterial extracellular solute-binding family 1, conserved site CH55_2848 IPR003439 ABC transporter-like CH55_2848 IPR003593 AAA+ ATPase domain CH55_2848 IPR008995 Molybdate/tungstate binding, C-terminal CH55_2848 IPR013611 Transport-associated OB, type 2 CH55_2848 IPR017871 ABC transporter, conserved site CH55_2848 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2849 IPR003192 Porin, LamB type CH55_2849 IPR023738 Maltoporin CH55_2849 IPR036998 CH55_2849 CH55_2850 IPR010794 Maltose operon periplasmic CH55_2852 IPR008514 Type VI secretion system effector, Hcp CH55_2852 IPR036624 CH55_2852 CH55_2853 IPR008312 Uncharacterised conserved protein UCP028301 CH55_2854 IPR010269 Protein of unknown function DUF877 CH55_2855 IPR007048 GpW/Gp25/anti-adapter protein IraD CH55_2855 IPR017737 Type VI secretion system, lysozyme-related protein CH55_2856 IPR010272 Type VI secretion system, VCA0110 CH55_2857 IPR001584 Integrase, catalytic core CH55_2857 IPR006120 Resolvase, HTH domain CH55_2857 IPR009057 Homeodomain-like CH55_2857 IPR012337 Ribonuclease H-like domain CH55_2859 IPR002611 IstB-like ATP-binding protein CH55_2859 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_286 IPR003538 Gram-negative bacterial TonB protein CH55_286 IPR006260 TonB, C-terminal CH55_286 IPR037682 CH55_286 CH55_2860 IPR001584 Integrase, catalytic core CH55_2860 IPR012337 Ribonuclease H-like domain CH55_2860 IPR025948 HTH-like domain CH55_2860 IPR036397 CH55_2860 CH55_2861 IPR010272 Type VI secretion system, VCA0110 CH55_2862 IPR009057 Homeodomain-like CH55_2862 IPR010921 Trp repressor/replication initiator CH55_2863 IPR001034 HTH DeoR N-terminal domain CH55_2863 IPR014036 DeoR C-terminal sensor domain CH55_2863 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CH55_2863 IPR036388 CH55_2863 CH55_2863 IPR036390 CH55_2863 CH55_2863 IPR037171 CH55_2863 CH55_2864 IPR022732 Peptidase S54, GlpG peptidase, N-terminal CH55_2864 IPR022764 Peptidase S54, rhomboid domain CH55_2864 IPR023662 Rhomboid protease GlpG CH55_2864 IPR035952 CH55_2864 CH55_2864 IPR038236 CH55_2864 CH55_2865 IPR001763 Rhodanese-like domain CH55_2865 IPR023695 Thiosulfate sulfurtransferase, bacterial CH55_2865 IPR036873 CH55_2865 CH55_2866 IPR000792 Transcription regulator LuxR, C-terminal CH55_2866 IPR011990 Tetratricopeptide-like helical domain CH55_2866 IPR016032 Signal transduction response regulator, C-terminal effector CH55_2866 IPR023768 Transcriptional regulator HTH-type, MalT CH55_2866 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2866 IPR036388 CH55_2866 CH55_2868 IPR000811 Glycosyl transferase, family 35 CH55_2868 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CH55_2868 IPR035090 CH55_2868 CH55_2869 IPR003385 Glycoside hydrolase, family 77 CH55_2869 IPR017853 Glycoside hydrolase, superfamily CH55_287 IPR001207 Transposase, mutator type CH55_2870 IPR000361 FeS cluster biogenesis CH55_2870 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CH55_2870 IPR017726 Fe/S biogenesis protein NfuA CH55_2870 IPR034904 CH55_2870 CH55_2870 IPR035903 CH55_2870 CH55_2871 IPR000836 Phosphoribosyltransferase domain CH55_2871 IPR029057 Phosphoribosyltransferase-like CH55_2872 IPR000073 Alpha/beta hydrolase fold-1 CH55_2872 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase CH55_2872 IPR029058 Alpha/Beta hydrolase fold CH55_2873 IPR010854 Domain of unknown function DUF1471 CH55_2873 IPR025543 Dodecin-like CH55_2873 IPR036275 CH55_2873 CH55_2874 IPR015102 Transcriptional regulator HTH-type, FeoC CH55_2874 IPR023732 Ferrous iron transport protein C CH55_2874 IPR036388 CH55_2874 CH55_2874 IPR036390 CH55_2874 CH55_2875 IPR003373 Ferrous iron transport protein B CH55_2875 IPR005225 Small GTP-binding protein domain CH55_2875 IPR011640 Ferrous iron transport protein B, C-terminal CH55_2875 IPR011642 Nucleoside recognition Gate CH55_2875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2875 IPR030389 CH55_2875 CH55_2876 IPR007167 Ferrous iron transporter FeoA domain CH55_2876 IPR008988 Transcriptional repressor, C-terminal CH55_2876 IPR038157 CH55_2876 CH55_2877 IPR003029 Ribosomal protein S1, RNA-binding domain CH55_2877 IPR006641 YqgF/RNase H-like domain CH55_2877 IPR010994 RuvA domain 2-like CH55_2877 IPR012337 Ribonuclease H-like domain CH55_2877 IPR012340 Nucleic acid-binding, OB-fold CH55_2877 IPR018974 Tex-like protein, N-terminal CH55_2877 IPR022967 RNA-binding domain, S1 CH55_2877 IPR023319 Tex-like protein, HTH domain CH55_2877 IPR023323 Tex-like domain CH55_2877 IPR032639 CH55_2877 CH55_2877 IPR037027 CH55_2877 CH55_2878 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CH55_2878 IPR006358 Transcription elongation factor GreB CH55_2878 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CH55_2878 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CH55_2878 IPR023459 Transcription elongation factor GreA/GreB family CH55_2878 IPR028624 Transcription elongation factor GreA/GreB CH55_2878 IPR036805 CH55_2878 CH55_2878 IPR036953 CH55_2878 CH55_2879 IPR001789 Signal transduction response regulator, receiver domain CH55_2879 IPR001867 Signal transduction response regulator, C-terminal CH55_2879 IPR011006 CheY-like superfamily CH55_2879 IPR016032 Signal transduction response regulator, C-terminal effector CH55_2879 IPR036388 CH55_2879 CH55_288 IPR006683 Thioesterase superfamily CH55_288 IPR029069 HotDog domain CH55_2880 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_2880 IPR003660 HAMP linker domain CH55_2880 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_2880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_2880 IPR036097 CH55_2880 CH55_2880 IPR036890 CH55_2880 CH55_2881 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CH55_2881 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CH55_2881 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CH55_2881 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CH55_2882 IPR000397 Heat shock protein Hsp33 CH55_2882 IPR016153 Heat shock protein Hsp33, N-terminal CH55_2882 IPR016154 Heat shock protein Hsp33, C-terminal CH55_2882 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CH55_2883 IPR002942 RNA-binding S4 domain CH55_2883 IPR025708 Heat shock protein 15 CH55_2883 IPR036986 CH55_2883 CH55_2884 IPR006439 HAD hydrolase, subfamily IA CH55_2884 IPR023214 HAD-like domain CH55_2884 IPR036412 CH55_2884 CH55_2885 IPR010771 Intracellular growth attenuator IgaA CH55_2887 IPR000086 NUDIX hydrolase domain CH55_2887 IPR015797 NUDIX hydrolase domain-like CH55_2887 IPR020084 NUDIX hydrolase, conserved site CH55_2888 IPR001264 Glycosyl transferase, family 51 CH55_2888 IPR001460 Penicillin-binding protein, transpeptidase CH55_2888 IPR012338 Beta-lactamase/transpeptidase-like CH55_2888 IPR023346 Lysozyme-like domain CH55_2888 IPR031376 CH55_2888 CH55_2888 IPR036950 CH55_2888 CH55_2889 IPR005883 Type IV pilus assembly protein PilM CH55_289 IPR006008 Intracellular septation protein A CH55_2890 IPR007813 Fimbrial assembly PilN CH55_2892 IPR019684 Protein of unknown function DUF2531 CH55_2893 IPR001775 GspD/PilQ family CH55_2893 IPR004846 Type II/III secretion system CH55_2893 IPR005644 NolW-like CH55_2893 IPR013355 Type IV pilus secretin PilQ CH55_2893 IPR038591 CH55_2893 CH55_2894 IPR000623 Shikimate kinase/Threonine synthase-like 1 CH55_2894 IPR023000 Shikimate kinase, conserved site CH55_2894 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2894 IPR031322 CH55_2894 CH55_2895 IPR016037 3-dehydroquinate synthase AroB CH55_2895 IPR030960 CH55_2895 CH55_2895 IPR030963 CH55_2895 CH55_2896 IPR007730 Sporulation-related domain CH55_2896 IPR032899 CH55_2896 CH55_2896 IPR036680 CH55_2896 CH55_2897 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_2897 IPR012263 Adenine modification methylase, M.EcoRV-type CH55_2897 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CH55_2897 IPR023095 Adenine-specific methyltransferase, domain 2 CH55_2897 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2898 IPR000056 Ribulose-phosphate 3-epimerase-like CH55_2898 IPR011060 Ribulose-phosphate binding barrel CH55_2898 IPR013785 Aldolase-type TIM barrel CH55_2898 IPR026019 Ribulose-phosphate 3-epimerase CH55_2899 IPR006346 2-phosphoglycolate phosphatase, prokaryotic CH55_2899 IPR006439 HAD hydrolase, subfamily IA CH55_2899 IPR023198 Phosphoglycolate phosphatase, domain 2 CH55_2899 IPR023214 HAD-like domain CH55_2899 IPR036412 CH55_2899 CH55_2899 IPR037512 CH55_2899 CH55_29 IPR007730 Sporulation-related domain CH55_29 IPR032898 CH55_29 CH55_29 IPR036680 CH55_29 CH55_290 IPR011547 Sulphate transporter CH55_2900 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_2900 IPR002305 Aminoacyl-tRNA synthetase, class Ic CH55_2900 IPR002306 Tryptophan-tRNA ligase CH55_2900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_2900 IPR024109 Tryptophan-tRNA ligase, bacterial-type CH55_2901 IPR000878 Tetrapyrrole methylase CH55_2901 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CH55_2901 IPR006366 Uroporphyrin-III C-methyltransferase CH55_2901 IPR006367 Sirohaem synthase, N-terminal CH55_2901 IPR012409 Sirohaem synthase CH55_2901 IPR014776 Tetrapyrrole methylase, subdomain 2 CH55_2901 IPR014777 Tetrapyrrole methylase, subdomain 1 CH55_2901 IPR019478 Sirohaem synthase, dimerisation domain CH55_2901 IPR028281 Siroheme synthase, central domain CH55_2901 IPR035996 CH55_2901 CH55_2901 IPR036291 CH55_2901 CH55_2901 IPR037115 CH55_2901 CH55_2902 IPR000292 Formate/nitrite transporter CH55_2902 IPR023271 Aquaporin-like CH55_2902 IPR024002 Formate/nitrite transporter, conserved site CH55_2903 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD CH55_2903 IPR036922 CH55_2903 CH55_2904 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CH55_2904 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site CH55_2904 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CH55_2904 IPR007419 BFD-like [2Fe-2S]-binding domain CH55_2904 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CH55_2904 IPR017121 Nitrite reductase [NAD(P)H], large subunit CH55_2904 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_2904 IPR036136 CH55_2904 CH55_2904 IPR036188 CH55_2904 CH55_2905 IPR011059 Metal-dependent hydrolase, composite domain CH55_2905 IPR013108 Amidohydrolase 3 CH55_2905 IPR032466 CH55_2905 CH55_2906 IPR011701 Major facilitator superfamily CH55_2906 IPR023528 Major facilitator superfamily transporter, TsgA CH55_2906 IPR036259 CH55_2906 CH55_2907 IPR000531 TonB-dependent receptor, beta-barrel CH55_2907 IPR010100 TonB-dependent copper receptor CH55_2907 IPR012910 TonB-dependent receptor, plug CH55_2907 IPR036942 CH55_2907 CH55_2907 IPR037066 CH55_2907 CH55_2908 IPR000843 Transcription regulator HTH, LacI CH55_2908 IPR010982 Lambda repressor-like, DNA-binding domain CH55_2908 IPR028082 Periplasmic binding protein-like I CH55_2909 IPR001088 Glycoside hydrolase, family 4 CH55_2909 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CH55_2909 IPR019802 Glycoside hydrolase, family 4, conserved site CH55_2909 IPR022616 Glycosyl hydrolase, family 4, C-terminal CH55_2909 IPR036291 CH55_2909 CH55_291 IPR002645 STAS domain CH55_291 IPR036513 CH55_291 CH55_2910 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CH55_2910 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CH55_2910 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CH55_2910 IPR029000 Cyclophilin-like domain CH55_2911 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2911 IPR033186 CH55_2911 CH55_2912 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CH55_2912 IPR017926 Glutamine amidotransferase CH55_2912 IPR029062 Class I glutamine amidotransferase-like CH55_2913 IPR004636 Acetylornithine/Succinylornithine transaminase family CH55_2913 IPR005814 Aminotransferase class-III CH55_2913 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_2913 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_2913 IPR015424 Pyridoxal phosphate-dependent transferase CH55_2913 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria CH55_2914 IPR010020 Integral membrane protein, YccS/YhfK CH55_2914 IPR032692 CH55_2914 CH55_2915 IPR000595 Cyclic nucleotide-binding domain CH55_2915 IPR012318 Helix-turn-helix motif, Crp-type CH55_2915 IPR014710 RmlC-like jelly roll fold CH55_2915 IPR018335 Transcription regulator HTH, Crp-type, conserved site CH55_2915 IPR018488 Cyclic nucleotide-binding, conserved site CH55_2915 IPR018490 Cyclic nucleotide-binding-like CH55_2915 IPR036388 CH55_2915 CH55_2915 IPR036390 CH55_2915 CH55_2916 IPR003718 OsmC/Ohr family CH55_2916 IPR015946 K homology domain-like, alpha/beta CH55_2916 IPR036102 CH55_2916 CH55_2917 IPR010665 Protein of unknown function DUF1240 CH55_2918 IPR006082 Phosphoribulokinase CH55_2918 IPR006083 Phosphoribulokinase/uridine kinase CH55_2918 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2919 IPR010648 Uncharacterised protein family UPF0270 CH55_2919 IPR036685 CH55_2919 CH55_292 IPR009627 Uncharacterised protein family UPF0259 CH55_2920 IPR000073 Alpha/beta hydrolase fold-1 CH55_2920 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site CH55_2920 IPR012020 AB-hydrolase YheT, putative CH55_2920 IPR029058 Alpha/Beta hydrolase fold CH55_2921 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CH55_2922 IPR001638 Extracellular solute-binding protein, family 3 CH55_2922 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CH55_2922 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA CH55_2923 IPR003439 ABC transporter-like CH55_2923 IPR003593 AAA+ ATPase domain CH55_2923 IPR017871 ABC transporter, conserved site CH55_2923 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2924 IPR000515 MetI-like domain CH55_2924 IPR035906 CH55_2924 CH55_2925 IPR003819 Taurine catabolism dioxygenase TauD/TfdA CH55_2926 IPR002201 Glycosyl transferase, family 9 CH55_2927 IPR001173 Glycosyltransferase 2-like CH55_2927 IPR029044 Nucleotide-diphospho-sugar transferases CH55_2928 IPR003439 ABC transporter-like CH55_2928 IPR003593 AAA+ ATPase domain CH55_2928 IPR017871 ABC transporter, conserved site CH55_2928 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2928 IPR032781 CH55_2928 CH55_2929 IPR003439 ABC transporter-like CH55_2929 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_293 IPR000758 Virulence-related outer membrane protein CH55_293 IPR005618 Outer membrane protein, OmpW CH55_293 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_2930 IPR003680 Flavodoxin-like fold CH55_2930 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG CH55_2930 IPR029039 Flavoprotein-like CH55_2931 IPR003148 Regulator of K+ conductance, N-terminal CH55_2931 IPR004771 K+/H+ exchanger CH55_2931 IPR006153 Cation/H+ exchanger CH55_2931 IPR020884 Glutathione-regulated potassium-efflux system protein KefB CH55_2931 IPR036291 CH55_2931 CH55_2931 IPR038770 CH55_2931 CH55_2932 IPR012658 Conserved hypothetical protein CHP02443 CH55_2933 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CH55_2934 IPR007236 SlyX CH55_2935 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CH55_2935 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CH55_2935 IPR036944 CH55_2935 CH55_2936 IPR013559 YheO-like CH55_2936 IPR039445 CH55_2936 CH55_2937 IPR003787 Sulphur relay, DsrE/F-like protein CH55_2937 IPR017463 Sulphur relay, TusD/DsrE CH55_2937 IPR027396 DsrEFH-like CH55_2938 IPR003787 Sulphur relay, DsrE/F-like protein CH55_2938 IPR017462 Sulphur relay, TusC/DsrF CH55_2938 IPR027396 DsrEFH-like CH55_2938 IPR037450 CH55_2938 CH55_2939 IPR007215 Sulphur relay, TusB/DsrH CH55_2939 IPR023526 Sulphur relay, TusB CH55_2939 IPR027396 DsrEFH-like CH55_294 IPR007055 BON domain CH55_294 IPR014004 Transport-associated and nodulation domain, bacteria CH55_2940 IPR005679 Ribosomal protein S12, bacteria CH55_2940 IPR006032 Ribosomal protein S12/S23 CH55_2940 IPR012340 Nucleic acid-binding, OB-fold CH55_2941 IPR000235 Ribosomal protein S5/S7 CH55_2941 IPR005717 Ribosomal protein S7, bacterial/organellar-type CH55_2941 IPR020606 Ribosomal protein S7, conserved site CH55_2941 IPR023798 Ribosomal protein S7 domain CH55_2941 IPR036823 CH55_2941 CH55_2942 IPR000640 Translation elongation factor EFG, V domain CH55_2942 IPR000795 Elongation factor, GTP-binding domain CH55_2942 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CH55_2942 IPR004540 Translation elongation factor EFG/EF2 CH55_2942 IPR005225 Small GTP-binding protein domain CH55_2942 IPR005517 Translation elongation factor EFG/EF2, domain IV CH55_2942 IPR009000 Translation protein, beta-barrel domain CH55_2942 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2942 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2942 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2942 IPR031157 CH55_2942 CH55_2942 IPR035647 CH55_2942 CH55_2943 IPR000795 Elongation factor, GTP-binding domain CH55_2943 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CH55_2943 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CH55_2943 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CH55_2943 IPR005225 Small GTP-binding protein domain CH55_2943 IPR009000 Translation protein, beta-barrel domain CH55_2943 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH55_2943 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2943 IPR031157 CH55_2943 CH55_2944 IPR002686 Transposase IS200-like CH55_2944 IPR036515 CH55_2944 CH55_2945 IPR007419 BFD-like [2Fe-2S]-binding domain CH55_2946 IPR002024 Bacterioferritin CH55_2946 IPR008331 Ferritin/DPS protein domain CH55_2946 IPR009078 Ferritin-like superfamily CH55_2946 IPR012347 Ferritin-related CH55_2947 IPR001848 Ribosomal protein S10 CH55_2947 IPR018268 Ribosomal protein S10, conserved site CH55_2947 IPR027486 Ribosomal protein S10 domain CH55_2947 IPR036838 CH55_2947 CH55_2948 IPR000597 Ribosomal protein L3 CH55_2948 IPR009000 Translation protein, beta-barrel domain CH55_2948 IPR019926 Ribosomal protein L3, conserved site CH55_2948 IPR019927 Ribosomal protein L3, bacterial/organelle-type CH55_2949 IPR002136 Ribosomal protein L4/L1e CH55_2949 IPR013005 Ribosomal protein L4/L1e, bacterial-type CH55_2949 IPR023574 Ribosomal protein L4 domain CH55_295 IPR002028 Tryptophan synthase, alpha chain CH55_295 IPR011060 Ribulose-phosphate binding barrel CH55_295 IPR013785 Aldolase-type TIM barrel CH55_295 IPR018204 Tryptophan synthase, alpha chain, active site CH55_2950 IPR001014 Ribosomal protein L23/L25, conserved site CH55_2950 IPR012677 Nucleotide-binding, alpha-beta plait CH55_2950 IPR012678 Ribosomal protein L23/L15e core domain CH55_2950 IPR013025 Ribosomal protein L25/L23 CH55_2951 IPR002171 Ribosomal protein L2 CH55_2951 IPR005880 Ribosomal protein L2, bacterial/organellar-type CH55_2951 IPR008991 Translation protein SH3-like domain CH55_2951 IPR012340 Nucleic acid-binding, OB-fold CH55_2951 IPR014722 Ribosomal protein L2 domain 2 CH55_2951 IPR014726 Ribosomal protein L2, domain 3 CH55_2951 IPR022666 Ribosomal Proteins L2, RNA binding domain CH55_2951 IPR022669 Ribosomal protein L2, C-terminal CH55_2951 IPR022671 Ribosomal protein L2, conserved site CH55_2952 IPR002222 Ribosomal protein S19/S15 CH55_2952 IPR005732 Ribosomal protein S19, bacterial-type CH55_2952 IPR020934 Ribosomal protein S19 conserved site CH55_2952 IPR023575 Ribosomal protein S19, superfamily CH55_2953 IPR001063 Ribosomal protein L22/L17 CH55_2953 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CH55_2953 IPR018260 Ribosomal protein L22/L17, conserved site CH55_2953 IPR036394 CH55_2953 CH55_2954 IPR001351 Ribosomal protein S3, C-terminal CH55_2954 IPR004044 K Homology domain, type 2 CH55_2954 IPR004087 K Homology domain CH55_2954 IPR005704 Ribosomal protein S3, bacterial CH55_2954 IPR009019 K homology domain, prokaryotic type CH55_2954 IPR015946 K homology domain-like, alpha/beta CH55_2954 IPR018280 Ribosomal protein S3, conserved site CH55_2954 IPR036419 CH55_2954 CH55_2955 IPR000114 Ribosomal protein L16 CH55_2955 IPR016180 Ribosomal protein L10e/L16 CH55_2955 IPR020798 Ribosomal protein L16, conserved site CH55_2955 IPR036920 CH55_2955 CH55_2956 IPR001854 Ribosomal protein L29 CH55_2956 IPR018254 Ribosomal protein L29, conserved site CH55_2956 IPR036049 CH55_2956 CH55_2957 IPR000266 Ribosomal protein S17 CH55_2957 IPR012340 Nucleic acid-binding, OB-fold CH55_2957 IPR019979 Ribosomal protein S17, conserved site CH55_2957 IPR019984 Ribosomal protein S17, bacterial-type CH55_2958 IPR000218 Ribosomal protein L14b/L23e CH55_2958 IPR005745 Ribosomal protein L14, bacterial-type CH55_2958 IPR019972 Ribosomal protein L14 conserved site CH55_2958 IPR036853 CH55_2958 CH55_2959 IPR003256 Ribosomal protein L24 CH55_2959 IPR005824 KOW CH55_2959 IPR005825 Ribosomal protein L24/L26, conserved site CH55_2959 IPR008991 Translation protein SH3-like domain CH55_2959 IPR014722 Ribosomal protein L2 domain 2 CH55_296 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_296 IPR006653 Tryptophan synthase, beta chain, conserved site CH55_296 IPR006654 Tryptophan synthase, beta chain CH55_296 IPR023026 Tryptophan synthase beta chain/beta chain-like CH55_296 IPR036052 CH55_296 CH55_2960 IPR002132 Ribosomal protein L5 CH55_2960 IPR020930 Ribosomal protein L5, bacterial-type CH55_2960 IPR022803 Ribosomal protein L5 domain CH55_2960 IPR031309 CH55_2960 CH55_2960 IPR031310 CH55_2960 CH55_2961 IPR001209 Ribosomal protein S14 CH55_2961 IPR018271 Ribosomal protein S14, conserved site CH55_2961 IPR023036 Ribosomal protein S14, bacterial/plastid CH55_2962 IPR000630 Ribosomal protein S8 CH55_2962 IPR035987 CH55_2962 CH55_2963 IPR000702 Ribosomal protein L6 CH55_2963 IPR002358 Ribosomal protein L6, conserved site CH55_2963 IPR019906 Ribosomal protein L6, bacterial-type CH55_2963 IPR020040 Ribosomal protein L6, alpha-beta domain CH55_2963 IPR036789 CH55_2963 CH55_2964 IPR004389 Ribosomal protein L18, bacterial-type CH55_2964 IPR005484 Ribosomal protein L18/L5 CH55_2965 IPR005324 Ribosomal protein S5, C-terminal CH55_2965 IPR005712 Ribosomal protein S5, bacterial-type CH55_2965 IPR013810 Ribosomal protein S5, N-terminal CH55_2965 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_2965 IPR018192 Ribosomal protein S5, N-terminal, conserved site CH55_2965 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_2966 IPR005996 Ribosomal protein L30, bacterial-type CH55_2966 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CH55_2966 IPR018038 Ribosomal protein L30, conserved site CH55_2966 IPR036919 CH55_2966 CH55_2967 IPR001196 Ribosomal protein L15, conserved site CH55_2967 IPR005749 Ribosomal protein L15, bacterial-type CH55_2967 IPR021131 Ribosomal protein L18e/L15P CH55_2967 IPR030878 CH55_2967 CH55_2967 IPR036227 CH55_2967 CH55_2968 IPR002208 SecY/SEC61-alpha family CH55_2968 IPR023201 SecY subunit domain CH55_2968 IPR026593 Protein translocase subunit SecY CH55_2968 IPR030659 CH55_2968 CH55_2969 IPR000473 Ribosomal protein L36 CH55_2969 IPR035977 CH55_2969 CH55_297 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain CH55_297 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CH55_297 IPR011060 Ribulose-phosphate binding barrel CH55_297 IPR013785 Aldolase-type TIM barrel CH55_297 IPR013798 Indole-3-glycerol phosphate synthase CH55_2970 IPR001892 Ribosomal protein S13 CH55_2970 IPR010979 Ribosomal protein S13-like, H2TH CH55_2970 IPR018269 Ribosomal protein S13, conserved site CH55_2970 IPR019980 Ribosomal protein S13, bacterial-type CH55_2970 IPR027437 30s ribosomal protein S13, C-terminal CH55_2971 IPR001971 Ribosomal protein S11 CH55_2971 IPR018102 Ribosomal S11, conserved site CH55_2971 IPR019981 Ribosomal protein S11, bacterial-type CH55_2971 IPR036967 CH55_2971 CH55_2972 IPR001912 Ribosomal protein S4/S9, N-terminal CH55_2972 IPR002942 RNA-binding S4 domain CH55_2972 IPR005709 Ribosomal protein S4, bacterial-type CH55_2972 IPR018079 Ribosomal protein S4, conserved site CH55_2972 IPR036986 CH55_2972 CH55_2973 IPR011260 RNA polymerase, alpha subunit, C-terminal CH55_2973 IPR011262 DNA-directed RNA polymerase, insert domain CH55_2973 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CH55_2973 IPR011773 DNA-directed RNA polymerase, alpha subunit CH55_2973 IPR036603 CH55_2973 CH55_2973 IPR036643 CH55_2973 CH55_2974 IPR000456 Ribosomal protein L17 CH55_2974 IPR036373 CH55_2974 CH55_2975 IPR000551 MerR-type HTH domain CH55_2975 IPR009061 DNA binding domain, putative CH55_2975 IPR011788 Zn(II)-responsive transcriptional regulator CH55_2976 IPR005589 Protein of unknown function DUF331 CH55_2977 IPR001185 Large-conductance mechanosensitive channel CH55_2977 IPR019823 Large-conductance mechanosensitive channel, conserved site CH55_2977 IPR036019 CH55_2977 CH55_2977 IPR037673 CH55_2977 CH55_2978 IPR003148 Regulator of K+ conductance, N-terminal CH55_2978 IPR006036 Potassium uptake protein TrkA CH55_2978 IPR006037 Regulator of K+ conductance, C-terminal CH55_2978 IPR036291 CH55_2978 CH55_2978 IPR036721 CH55_2978 CH55_2979 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p CH55_2979 IPR004573 rRNA small subunit methyltransferase B CH55_2979 IPR006027 NusB/RsmB/TIM44 CH55_2979 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CH55_2979 IPR023267 RNA (C5-cytosine) methyltransferase CH55_2979 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae CH55_2979 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_2979 IPR035926 CH55_2979 CH55_298 IPR000312 Glycosyl transferase, family 3 CH55_298 IPR005940 Anthranilate phosphoribosyl transferase CH55_298 IPR017459 Glycosyl transferase family 3, N-terminal domain CH55_298 IPR035902 CH55_298 CH55_298 IPR036320 CH55_298 CH55_2980 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CH55_2980 IPR002376 Formyl transferase, N-terminal CH55_2980 IPR005793 Formyl transferase, C-terminal CH55_2980 IPR005794 Methionyl-tRNA formyltransferase CH55_2980 IPR011034 Formyl transferase, C-terminal-like CH55_2980 IPR036477 CH55_2980 CH55_2980 IPR037022 CH55_2980 CH55_2981 IPR023635 Peptide deformylase CH55_2981 IPR036821 CH55_2981 CH55_2982 IPR003488 DNA recombination-mediator protein A CH55_2983 IPR007456 Protein of unknown function DUF494 CH55_2984 IPR013498 DNA topoisomerase, type IA, zn finger CH55_2985 IPR006070 YrdC-like domain CH55_2985 IPR017945 DHBP synthase RibB-like alpha/beta domain CH55_2985 IPR023535 Threonylcarbamoyl-AMP synthase CH55_2986 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CH55_2986 IPR011342 Shikimate dehydrogenase CH55_2986 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CH55_2986 IPR022893 Shikimate, quinate/shikimate dehydrogenase CH55_2986 IPR036291 CH55_2986 CH55_2987 IPR001451 Bacterial transferase hexapeptide repeat CH55_2987 IPR011004 Trimeric LpxA-like CH55_2988 IPR002611 IstB-like ATP-binding protein CH55_2989 IPR002611 IstB-like ATP-binding protein CH55_2989 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_299 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CH55_299 IPR017926 Glutamine amidotransferase CH55_299 IPR029062 Class I glutamine amidotransferase-like CH55_2991 IPR001584 Integrase, catalytic core CH55_2991 IPR006120 Resolvase, HTH domain CH55_2991 IPR009057 Homeodomain-like CH55_2991 IPR012337 Ribonuclease H-like domain CH55_2992 IPR000182 GNAT domain CH55_2992 IPR012660 Thioesterase, putative CH55_2992 IPR016181 Acyl-CoA N-acyltransferase CH55_2992 IPR029069 HotDog domain CH55_2994 IPR006042 Xanthine/uracil permease CH55_2994 IPR006043 Xanthine/uracil/vitamin C permease CH55_2994 IPR017588 Xanthine permease CH55_2995 IPR004445 Sodium/glutamate symporter CH55_2996 IPR001650 Helicase, C-terminal CH55_2996 IPR004609 ATP-dependent DNA helicase RecG CH55_2996 IPR011545 DEAD/DEAH box helicase domain CH55_2996 IPR012340 Nucleic acid-binding, OB-fold CH55_2996 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_2996 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_2996 IPR033454 CH55_2996 CH55_2997 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH55_2997 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal CH55_2997 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_2997 IPR029028 Alpha/beta knot methyltransferases CH55_2997 IPR033671 CH55_2997 CH55_2998 IPR002912 ACT domain CH55_2998 IPR003607 HD/PDEase domain CH55_2998 IPR004095 TGS CH55_2998 IPR004811 RelA/SpoT family CH55_2998 IPR007685 RelA/SpoT CH55_2998 IPR012675 Beta-grasp domain CH55_2998 IPR012676 TGS-like CH55_2999 IPR003716 DNA-directed RNA polymerase, omega subunit CH55_2999 IPR006110 RNA polymerase, subunit omega/K/RPB6 CH55_2999 IPR012293 RNA polymerase subunit, RPB6/omega CH55_2999 IPR036161 CH55_2999 CH55_3 IPR007428 VacJ-like lipoprotein CH55_30 IPR003825 Colicin V production, CvpA CH55_300 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial CH55_300 IPR005801 ADC synthase CH55_300 IPR006805 Anthranilate synthase component I, N-terminal CH55_300 IPR015890 Chorismate binding, C-terminal CH55_300 IPR019999 Anthranilate synthase component I - like CH55_3000 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CH55_3000 IPR017665 Guanylate kinase CH55_3000 IPR020590 Guanylate kinase, conserved site CH55_3000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3001 IPR004150 NAD-dependent DNA ligase, OB-fold CH55_3001 IPR012340 Nucleic acid-binding, OB-fold CH55_3001 IPR013839 NAD-dependent DNA ligase, adenylation CH55_3001 IPR013840 NAD-dependent DNA ligase, N-terminal CH55_3001 IPR020923 DNA ligase B CH55_3002 IPR010994 RuvA domain 2-like CH55_3003 IPR005115 Uncharacterised domain UPF0126 CH55_3004 IPR005229 Conserved hypothetical protein CHP00255 CH55_3004 IPR013527 YicC-like, N-terminal CH55_3004 IPR013551 Domain of unknown function DUF1732 CH55_3005 IPR001247 Exoribonuclease, phosphorolytic domain 1 CH55_3005 IPR002381 Ribonuclease phosphorolytic, bacterial-type CH55_3005 IPR015847 Exoribonuclease, phosphorolytic domain 2 CH55_3005 IPR018336 Ribonuclease PH, conserved site CH55_3005 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_3005 IPR027408 PNPase/RNase PH domain CH55_3005 IPR036345 CH55_3005 CH55_3006 IPR000836 Phosphoribosyltransferase domain CH55_3006 IPR004467 Orotate phosphoribosyl transferase domain CH55_3006 IPR023031 Orotate phosphoribosyltransferase CH55_3006 IPR029057 Phosphoribosyltransferase-like CH55_3007 IPR001647 DNA-binding HTH domain, TetR-type CH55_3007 IPR009057 Homeodomain-like CH55_3007 IPR023769 Nucleoid occlusion factor SlmA CH55_3007 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH55_3007 IPR036271 CH55_3007 CH55_3008 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CH55_3008 IPR029054 dUTPase-like CH55_3008 IPR036157 CH55_3008 CH55_3009 IPR003382 Flavoprotein CH55_3009 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CH55_3009 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CH55_3009 IPR035929 CH55_3009 CH55_3009 IPR036551 CH55_3009 CH55_301 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH55_301 IPR004013 PHP, C-terminal CH55_301 IPR016195 Polymerase/histidinol phosphatase-like CH55_3010 IPR001405 RadC protein CH55_3010 IPR010994 RuvA domain 2-like CH55_3010 IPR020891 Uncharacterised protein family UPF0758, conserved site CH55_3010 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CH55_3010 IPR025657 RadC-like JAB domain CH55_3011 IPR001383 Ribosomal protein L28 CH55_3011 IPR026569 Ribosomal protein L28/L24 CH55_3011 IPR034704 CH55_3011 CH55_3011 IPR037147 CH55_3011 CH55_3012 IPR001705 Ribosomal protein L33 CH55_3012 IPR011332 Zinc-binding ribosomal protein CH55_3012 IPR018264 Ribosomal protein L33, conserved site CH55_3012 IPR038584 CH55_3012 CH55_3013 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase CH55_3013 IPR010979 Ribosomal protein S13-like, H2TH CH55_3013 IPR012319 DNA glycosylase/AP lyase, catalytic domain CH55_3013 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CH55_3013 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CH55_3013 IPR020629 Formamidopyrimidine-DNA glycosylase CH55_3013 IPR035937 CH55_3013 CH55_3014 IPR001980 Coenzyme A biosynthesis protein CH55_3014 IPR004821 Cytidyltransferase-like domain CH55_3014 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_3015 IPR001173 Glycosyltransferase 2-like CH55_3015 IPR029044 Nucleotide-diphospho-sugar transferases CH55_3016 IPR001296 Glycosyl transferase, family 1 CH55_3016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CH55_3016 IPR038107 CH55_3016 CH55_3017 IPR002201 Glycosyl transferase, family 9 CH55_3017 IPR011908 Lipopolysaccharide heptosyltransferase I CH55_3018 IPR002201 Glycosyl transferase, family 9 CH55_3018 IPR011910 Lipopolysaccharide heptosyltransferase II CH55_3019 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_3019 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CH55_3019 IPR036291 CH55_3019 CH55_302 IPR006070 YrdC-like domain CH55_302 IPR017945 DHBP synthase RibB-like alpha/beta domain CH55_3020 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CH55_3020 IPR004839 Aminotransferase, class I/classII CH55_3020 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CH55_3020 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3020 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3020 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3021 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CH55_3021 IPR004627 L-threonine 3-dehydrogenase CH55_3021 IPR011032 GroES (chaperonin 10)-like CH55_3021 IPR013149 Alcohol dehydrogenase, C-terminal CH55_3021 IPR013154 Alcohol dehydrogenase GroES-like CH55_3021 IPR020843 Polyketide synthase, enoylreductase CH55_3021 IPR036291 CH55_3021 CH55_3022 IPR006837 Protein of unknown function DUF610, YibQ CH55_3022 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_3023 IPR006837 Protein of unknown function DUF610, YibQ CH55_3023 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_3024 IPR011055 Duplicated hybrid motif CH55_3024 IPR016047 Peptidase M23 CH55_3025 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CH55_3025 IPR006124 Metalloenzyme CH55_3025 IPR011258 BPG-independent PGAM, N-terminal CH55_3025 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_3025 IPR017850 Alkaline-phosphatase-like, core domain CH55_3025 IPR036646 CH55_3025 CH55_3026 IPR001763 Rhodanese-like domain CH55_3026 IPR036873 CH55_3026 CH55_3027 IPR002109 Glutaredoxin CH55_3027 IPR011767 Glutaredoxin active site CH55_3027 IPR011900 Glutaredoxin, GrxC CH55_3027 IPR014025 Glutaredoxin subgroup CH55_3027 IPR036249 CH55_3027 CH55_3028 IPR003708 Bacterial protein export chaperone SecB CH55_3028 IPR035958 CH55_3028 CH55_3029 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CH55_3029 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CH55_3029 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_3029 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CH55_3029 IPR013328 Dehydrogenase, multihelical CH55_3029 IPR036291 CH55_3029 CH55_303 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CH55_303 IPR002942 RNA-binding S4 domain CH55_303 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CH55_303 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CH55_303 IPR020103 Pseudouridine synthase, catalytic domain CH55_303 IPR036986 CH55_303 CH55_3030 IPR001451 Bacterial transferase hexapeptide repeat CH55_3030 IPR005881 Serine O-acetyltransferase CH55_3030 IPR010493 Serine acetyltransferase, N-terminal CH55_3030 IPR011004 Trimeric LpxA-like CH55_3030 IPR018357 Hexapeptide transferase, conserved site CH55_3031 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH55_3031 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CH55_3031 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_3031 IPR029028 Alpha/beta knot methyltransferases CH55_3032 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CH55_3032 IPR004026 Ada DNA repair, metal-binding CH55_3032 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CH55_3032 IPR009057 Homeodomain-like CH55_3032 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CH55_3032 IPR016221 Bifunctional regulatory protein Ada CH55_3032 IPR018060 DNA binding HTH domain, AraC-type CH55_3032 IPR035451 CH55_3032 CH55_3032 IPR036217 CH55_3032 CH55_3032 IPR036388 CH55_3032 CH55_3032 IPR036631 CH55_3032 CH55_3033 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_3033 IPR003660 HAMP linker domain CH55_3033 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_3033 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_3033 IPR032404 CH55_3033 CH55_3033 IPR036097 CH55_3033 CH55_3033 IPR036890 CH55_3033 CH55_3033 IPR038515 CH55_3033 CH55_3034 IPR001789 Signal transduction response regulator, receiver domain CH55_3034 IPR001867 Signal transduction response regulator, C-terminal CH55_3034 IPR011006 CheY-like superfamily CH55_3034 IPR036388 CH55_3034 CH55_3035 IPR012899 LTXXQ motif family protein CH55_3036 IPR006842 Transposase (putative), YhgA-like CH55_3036 IPR010106 Conserved hypothetical protein CHP01784 CH55_3037 IPR002524 Cation efflux protein CH55_3037 IPR023783 Cation efflux pump FieF CH55_3037 IPR027469 Cation efflux protein transmembrane domain CH55_3037 IPR027470 Cation efflux protein cytoplasmic domain CH55_3037 IPR036837 CH55_3037 CH55_3038 IPR000023 Phosphofructokinase domain CH55_3038 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type CH55_3038 IPR012828 6-phosphofructokinase CH55_3038 IPR015912 Phosphofructokinase, conserved site CH55_3038 IPR022953 Phosphofructokinase CH55_3038 IPR035966 CH55_3038 CH55_304 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CH55_304 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain CH55_304 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3040 IPR005669 Thiosulphate/Sulfate-binding protein CH55_3040 IPR034408 CH55_3040 CH55_3042 IPR001898 Sodium/sulphate symporter CH55_3042 IPR030676 CH55_3042 CH55_3043 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase CH55_3043 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase CH55_3043 IPR036704 CH55_3043 CH55_3044 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CH55_3044 IPR024078 Putative deacetylase LmbE-like domain CH55_3045 IPR000847 Transcription regulator HTH, LysR CH55_3045 IPR005119 LysR, substrate-binding CH55_3045 IPR036388 CH55_3045 CH55_3045 IPR036390 CH55_3045 CH55_3046 IPR000652 Triosephosphate isomerase CH55_3046 IPR013785 Aldolase-type TIM barrel CH55_3046 IPR020861 Triosephosphate isomerase, active site CH55_3046 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CH55_3046 IPR035990 CH55_3046 CH55_3047 IPR009918 Protein of unknown function DUF1454 CH55_3048 IPR008523 Lactobacillus phage LBR48, DUF805 CH55_3049 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_3049 IPR008333 Oxidoreductase, FAD-binding domain CH55_3049 IPR017938 Riboflavin synthase-like beta-barrel CH55_3049 IPR039261 CH55_3049 CH55_305 IPR002347 Glucose/ribitol dehydrogenase CH55_305 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_305 IPR036291 CH55_305 CH55_3050 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CH55_3051 IPR000577 CH55_3051 CH55_3051 IPR005999 Glycerol kinase CH55_3051 IPR018483 Carbohydrate kinase, FGGY, conserved site CH55_3051 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_3051 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_3052 IPR000425 Major intrinsic protein CH55_3052 IPR022357 Major intrinsic protein, conserved site CH55_3052 IPR023271 Aquaporin-like CH55_3053 IPR009252 Cell division protein ZapB CH55_3054 IPR002686 Transposase IS200-like CH55_3054 IPR036515 CH55_3054 CH55_3055 IPR003439 ABC transporter-like CH55_3055 IPR003593 AAA+ ATPase domain CH55_3055 IPR005074 Peptidase C39, bacteriocin processing CH55_3055 IPR011527 ABC transporter type 1, transmembrane domain CH55_3055 IPR017871 ABC transporter, conserved site CH55_3055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3055 IPR036640 CH55_3055 CH55_3056 IPR003997 RTX secretion protein D, Gram-negative bacteria CH55_3056 IPR006144 Secretion protein HlyD, conserved site CH55_3056 IPR011053 Single hybrid motif CH55_3058 IPR025326 Protein of unknown function DUF4232 CH55_3059 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase CH55_3059 IPR010203 Regulator of ribonuclease activity A CH55_3059 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria CH55_3059 IPR036704 CH55_3059 CH55_306 IPR002142 Peptidase S49 CH55_306 IPR013703 Peptidase S49, N-terminal proteobacteria CH55_306 IPR029045 ClpP/crotonase-like domain CH55_3060 IPR000537 UbiA prenyltransferase family CH55_3060 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CH55_3060 IPR026046 UbiA prenyltransferase domain containing protein 1 CH55_3061 IPR003593 AAA+ ATPase domain CH55_3061 IPR003959 ATPase, AAA-type, core CH55_3061 IPR004491 Heat shock protein HslU CH55_3061 IPR019489 Clp ATPase, C-terminal CH55_3061 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3062 IPR001353 Proteasome, subunit alpha/beta CH55_3062 IPR022281 ATP-dependent protease, HslV subunit CH55_3062 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_3063 IPR007730 Sporulation-related domain CH55_3063 IPR011930 Cell division protein FtsN CH55_3063 IPR036680 CH55_3063 CH55_3064 IPR000843 Transcription regulator HTH, LacI CH55_3064 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3064 IPR028082 Periplasmic binding protein-like I CH55_3066 IPR001650 Helicase, C-terminal CH55_3066 IPR005259 Primosomal protein n CH55_3066 IPR011545 DEAD/DEAH box helicase domain CH55_3066 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_3066 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3067 IPR002150 Ribosomal protein L31 CH55_3067 IPR027491 Ribosomal protein L31 type A CH55_3067 IPR034704 CH55_3067 CH55_3068 IPR008024 YiaAB two helix CH55_3069 IPR002084 Methionine repressor MetJ CH55_3069 IPR010985 Ribbon-helix-helix CH55_3069 IPR023453 Methionine repressor MetJ domain CH55_307 IPR019633 Protein of unknown function DUF2498 CH55_307 IPR038191 CH55_307 CH55_3070 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH55_3070 IPR011821 O-succinylhomoserine (thiol)-lyase CH55_3070 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3070 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3070 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3071 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH55_3071 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3071 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3072 IPR001048 Aspartate/glutamate/uridylate kinase CH55_3072 IPR001341 Aspartate kinase domain CH55_3072 IPR001342 Homoserine dehydrogenase, catalytic CH55_3072 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CH55_3072 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CH55_3072 IPR018042 Aspartate kinase, conserved site CH55_3072 IPR019811 Homoserine dehydrogenase, conserved site CH55_3072 IPR036291 CH55_3072 CH55_3072 IPR036393 CH55_3072 CH55_3073 IPR003171 Methylenetetrahydrofolate reductase CH55_3073 IPR004620 5,10-methylenetetrahydrofolate reductase CH55_3073 IPR029041 FAD-linked oxidoreductase-like CH55_3074 IPR001584 Integrase, catalytic core CH55_3074 IPR012337 Ribonuclease H-like domain CH55_3074 IPR025948 HTH-like domain CH55_3074 IPR036397 CH55_3074 CH55_3075 IPR009057 Homeodomain-like CH55_3075 IPR010921 Trp repressor/replication initiator CH55_3076 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_3076 IPR018129 Phosphoenolpyruvate carboxylase, active site CH55_3076 IPR021135 Phosphoenolpyruvate carboxylase CH55_3076 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CH55_3076 IPR033129 CH55_3076 CH55_3077 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH55_3077 IPR002933 Peptidase M20 CH55_3077 IPR010169 Acetylornithine deacetylase (ArgE) CH55_3077 IPR011650 Peptidase M20, dimerisation domain CH55_3077 IPR036264 CH55_3077 CH55_3078 IPR000534 Semialdehyde dehydrogenase, NAD-binding CH55_3078 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CH55_3078 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CH55_3078 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CH55_3078 IPR036291 CH55_3078 CH55_3079 IPR001048 Aspartate/glutamate/uridylate kinase CH55_3079 IPR004662 Acetylglutamate kinase CH55_3079 IPR036393 CH55_3079 CH55_3079 IPR037528 CH55_3079 CH55_3080 IPR000362 Fumarate lyase family CH55_3080 IPR008948 L-Aspartase-like CH55_3080 IPR009049 Argininosuccinate lyase CH55_3080 IPR020557 Fumarate lyase, conserved site CH55_3080 IPR022761 Fumarate lyase, N-terminal CH55_3080 IPR024083 Fumarase/histidase, N-terminal CH55_3080 IPR029419 Argininosuccinate lyase, C-terminal CH55_3082 IPR012910 TonB-dependent receptor, plug CH55_3082 IPR036942 CH55_3082 CH55_3082 IPR037066 CH55_3082 CH55_3083 IPR000531 TonB-dependent receptor, beta-barrel CH55_3083 IPR036942 CH55_3083 CH55_3084 IPR010495 Haem-binding HasA CH55_3084 IPR036912 CH55_3084 CH55_3085 IPR003439 ABC transporter-like CH55_3085 IPR003593 AAA+ ATPase domain CH55_3085 IPR010128 ATPase, type I secretion system, PrtD CH55_3085 IPR011527 ABC transporter type 1, transmembrane domain CH55_3085 IPR017871 ABC transporter, conserved site CH55_3085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3085 IPR036640 CH55_3085 CH55_3086 IPR003997 RTX secretion protein D, Gram-negative bacteria CH55_3086 IPR006144 Secretion protein HlyD, conserved site CH55_3086 IPR010129 Type I secretion membrane fusion protein, HlyD CH55_3086 IPR039562 CH55_3086 CH55_3087 IPR006260 TonB, C-terminal CH55_3087 IPR037682 CH55_3087 CH55_3088 IPR001100 CH55_3088 CH55_3088 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH55_3088 IPR016156 FAD/NAD-linked reductase, dimerisation domain CH55_3088 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_3088 IPR036188 CH55_3088 CH55_3088 IPR036324 CH55_3088 CH55_3089 IPR002109 Glutaredoxin CH55_3089 IPR011767 Glutaredoxin active site CH55_3089 IPR011906 Glutaredoxin domain CH55_3089 IPR013740 Redoxin CH55_3089 IPR014025 Glutaredoxin subgroup CH55_3089 IPR036249 CH55_3089 CH55_309 IPR003601 DNA topoisomerase, type IA, domain 2 CH55_309 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CH55_309 IPR005733 DNA topoisomerase I, bacterial-type CH55_309 IPR006171 Toprim domain CH55_309 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type CH55_309 IPR013497 DNA topoisomerase, type IA, central CH55_309 IPR013498 DNA topoisomerase, type IA, zn finger CH55_309 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CH55_309 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CH55_309 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CH55_309 IPR023405 DNA topoisomerase, type IA, core domain CH55_309 IPR023406 DNA topoisomerase, type IA, active site CH55_309 IPR028612 DNA topoisomerase I, type IA CH55_3090 IPR001100 CH55_3090 CH55_3090 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH55_3090 IPR016156 FAD/NAD-linked reductase, dimerisation domain CH55_3090 IPR022962 Soluble pyridine nucleotide transhydrogenase CH55_3090 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_3090 IPR036188 CH55_3090 CH55_3091 IPR000847 Transcription regulator HTH, LysR CH55_3091 IPR005119 LysR, substrate-binding CH55_3091 IPR036388 CH55_3091 CH55_3091 IPR036390 CH55_3091 CH55_3093 IPR001647 DNA-binding HTH domain, TetR-type CH55_3093 IPR009057 Homeodomain-like CH55_3093 IPR023764 Transcriptional repressor HTH, FabR CH55_3094 IPR009867 Protein of unknown function DUF1422 CH55_3095 IPR010280 (Uracil-5)-methyltransferase family CH55_3095 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CH55_3095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3095 IPR030390 CH55_3095 CH55_3095 IPR030391 CH55_3095 CH55_3096 IPR000531 TonB-dependent receptor, beta-barrel CH55_3096 IPR010101 TonB-dependent vitamin B12 transporter BtuB CH55_3096 IPR010917 TonB-dependent receptor, conserved site CH55_3096 IPR012910 TonB-dependent receptor, plug CH55_3096 IPR036942 CH55_3096 CH55_3096 IPR037066 CH55_3096 CH55_3097 IPR001920 Asp/Glu racemase CH55_3097 IPR004391 Glutamate racemase CH55_3097 IPR015942 Asp/Glu/hydantoin racemase CH55_3097 IPR018187 Asp/Glu racemase, active site CH55_3097 IPR033134 CH55_3097 CH55_31 IPR000836 Phosphoribosyltransferase domain CH55_31 IPR005854 Amidophosphoribosyl transferase CH55_31 IPR029055 Nucleophile aminohydrolases, N-terminal CH55_31 IPR029057 Phosphoribosyltransferase-like CH55_310 IPR000847 Transcription regulator HTH, LysR CH55_310 IPR005119 LysR, substrate-binding CH55_310 IPR036388 CH55_310 CH55_310 IPR036390 CH55_310 CH55_3104 IPR025997 Periplasmic binding protein domain CH55_3104 IPR028082 Periplasmic binding protein-like I CH55_3105 IPR003439 ABC transporter-like CH55_3105 IPR003593 AAA+ ATPase domain CH55_3105 IPR017871 ABC transporter, conserved site CH55_3105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3106 IPR001851 ABC transporter, permease CH55_3107 IPR000847 Transcription regulator HTH, LysR CH55_3107 IPR005119 LysR, substrate-binding CH55_3107 IPR020890 Transcription regulator HTH, HdfR CH55_3107 IPR036388 CH55_3107 CH55_3107 IPR036390 CH55_3107 CH55_3108 IPR001851 ABC transporter, permease CH55_3109 IPR007335 Protein of unknown function DUF413 CH55_3110 IPR000523 Magnesium chelatase, ChlI subunit CH55_3110 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase CH55_3110 IPR003593 AAA+ ATPase domain CH55_3110 IPR004482 Mg chelatase-related protein CH55_3110 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_3110 IPR025158 Mg chelatase-related protein, C-terminal domain CH55_3110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3111 IPR000399 TPP-binding enzyme, conserved site CH55_3111 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH55_3111 IPR012000 Thiamine pyrophosphate enzyme, central domain CH55_3111 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH55_3111 IPR012846 Acetolactate synthase, large subunit, biosynthetic CH55_3111 IPR029035 DHS-like NAD/FAD-binding domain CH55_3111 IPR029061 Thiamin diphosphate-binding fold CH55_3113 IPR001544 Aminotransferase, class IV CH55_3113 IPR005785 Branched-chain amino acid aminotransferase I CH55_3113 IPR018300 Aminotransferase, class IV, conserved site CH55_3113 IPR036038 CH55_3113 CH55_3114 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CH55_3114 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CH55_3114 IPR037237 CH55_3114 CH55_3115 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CH55_3115 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CH55_3115 IPR037237 CH55_3115 CH55_3116 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CH55_3116 IPR001721 ACT-like domain CH55_3116 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_3116 IPR005787 Threonine dehydratase, biosynthetic CH55_3116 IPR036052 CH55_3116 CH55_3116 IPR038110 CH55_3116 CH55_3117 IPR010351 Protein of unknown function DUF943 CH55_3118 IPR010351 Protein of unknown function DUF943 CH55_3119 IPR010351 Protein of unknown function DUF943 CH55_312 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CH55_312 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CH55_312 IPR006249 Aconitate/iron regulatory protein 2 CH55_312 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CH55_312 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CH55_312 IPR018136 Aconitase family, 4Fe-4S cluster binding site CH55_312 IPR036008 CH55_312 CH55_3120 IPR017483 Conserved hypothetical protein CHP03034 CH55_3122 IPR000847 Transcription regulator HTH, LysR CH55_3122 IPR005119 LysR, substrate-binding CH55_3122 IPR036388 CH55_3122 CH55_3122 IPR036390 CH55_3122 CH55_3123 IPR000506 Acetohydroxy acid isomeroreductase C-terminal CH55_3123 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_3123 IPR013023 Acetohydroxy acid isomeroreductase CH55_3123 IPR013116 Acetohydroxy acid isomeroreductase, catalytic CH55_3123 IPR013328 Dehydrogenase, multihelical CH55_3123 IPR036291 CH55_3123 CH55_3125 IPR016128 Pyosin/cloacin translocation domain CH55_3125 IPR036302 CH55_3125 CH55_3127 IPR003060 Pyocin S killer protein CH55_3127 IPR003615 HNH nuclease CH55_3127 IPR037146 CH55_3127 CH55_3128 IPR000290 Colicin immunity protein/pyocin immunity protein CH55_3128 IPR035900 CH55_3128 CH55_3129 IPR001829 Pili assembly chaperone, bacterial CH55_3129 IPR008962 PapD-like CH55_3129 IPR013783 Immunoglobulin-like fold CH55_3129 IPR016147 PapD, N-terminal, bacterial CH55_3129 IPR016148 Pili assembly chaperone, C-terminal domain CH55_3129 IPR018046 Pili assembly chaperone, conserved site CH55_3129 IPR036316 CH55_3129 CH55_313 IPR000926 GTP cyclohydrolase II, RibA CH55_313 IPR032677 CH55_313 CH55_313 IPR036144 CH55_313 CH55_3130 IPR000259 Fimbrial-type adhesion domain CH55_3130 IPR008966 Adhesion domain CH55_3130 IPR011228 Uncharacterised conserved protein UCP029766 CH55_3130 IPR036937 CH55_3130 CH55_3131 IPR000015 Outer membrane usher protein CH55_3131 IPR018030 Fimbrial membrane usher, conserved site CH55_3131 IPR025949 PapC-like, C-terminal domain CH55_3132 IPR025885 PapC, N-terminal domain CH55_3132 IPR037224 CH55_3132 CH55_3133 IPR001829 Pili assembly chaperone, bacterial CH55_3133 IPR008962 PapD-like CH55_3133 IPR013783 Immunoglobulin-like fold CH55_3133 IPR016147 PapD, N-terminal, bacterial CH55_3133 IPR016148 Pili assembly chaperone, C-terminal domain CH55_3133 IPR036316 CH55_3133 CH55_3134 IPR008966 Adhesion domain CH55_3134 IPR036937 CH55_3134 CH55_3134 IPR039458 CH55_3134 CH55_3135 IPR001207 Transposase, mutator type CH55_3136 IPR007788 Glutamine cyclotransferase CH55_3136 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CH55_3136 IPR015943 WD40/YVTN repeat-like-containing domain CH55_3138 IPR005752 DNA helicase, ATP-dependent, RepA type CH55_3138 IPR013986 DExx box DNA helicase domain CH55_3138 IPR014017 DNA helicase, UvrD-like, C-terminal CH55_3138 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3138 IPR034739 CH55_3138 CH55_3139 IPR003695 Ppx/GppA phosphatase CH55_314 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CH55_314 IPR036938 CH55_314 CH55_3140 IPR003695 Ppx/GppA phosphatase CH55_3141 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CH55_3141 IPR001650 Helicase, C-terminal CH55_3141 IPR011545 DEAD/DEAH box helicase domain CH55_3141 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_3141 IPR023554 RNA helicase, ATP-dependent, RhlB-type CH55_3141 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3142 IPR005746 Thioredoxin CH55_3142 IPR013766 Thioredoxin domain CH55_3142 IPR017937 Thioredoxin, conserved site CH55_3142 IPR036249 CH55_3142 CH55_3143 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_3143 IPR003593 AAA+ ATPase domain CH55_3143 IPR004665 Transcription termination factor Rho CH55_3143 IPR011112 Rho termination factor, N-terminal CH55_3143 IPR011113 Rho termination factor, RNA-binding CH55_3143 IPR011129 Cold shock protein CH55_3143 IPR012340 Nucleic acid-binding, OB-fold CH55_3143 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3143 IPR036269 CH55_3143 CH55_3144 IPR000715 Glycosyl transferase, family 4 CH55_3144 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase CH55_3145 IPR003856 Lipopolysaccharide biosynthesis CH55_3145 IPR032895 CH55_3145 CH55_3146 IPR003331 UDP-N-acetylglucosamine 2-epimerase CH55_3146 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type CH55_3146 IPR032892 CH55_3146 CH55_3147 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CH55_3147 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_3147 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CH55_3147 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CH55_3147 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CH55_3147 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CH55_3147 IPR032891 CH55_3147 CH55_3147 IPR036220 CH55_3147 CH55_3147 IPR036291 CH55_3147 CH55_3148 IPR005888 dTDP-glucose 4,6-dehydratase CH55_3148 IPR016040 NAD(P)-binding domain CH55_3148 IPR036291 CH55_3148 CH55_3149 IPR005835 Nucleotidyl transferase CH55_3149 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CH55_3149 IPR029044 Nucleotide-diphospho-sugar transferases CH55_315 IPR010445 Protein of unknown function DUF1049 CH55_315 IPR032906 CH55_315 CH55_3150 IPR000182 GNAT domain CH55_3150 IPR012752 TDP-D-fucosamine acetyltransferase WecD CH55_3150 IPR016181 Acyl-CoA N-acyltransferase CH55_3151 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH55_3151 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase CH55_3151 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3151 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3151 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3151 IPR032894 CH55_3151 CH55_3152 IPR002797 Polysaccharide biosynthesis protein CH55_3152 IPR032896 CH55_3152 CH55_3153 IPR009993 4-alpha-L-fucosyltransferase CH55_3154 IPR010691 Uncharacterised protein family WzyE CH55_3155 IPR004629 Glycosyl transferase WecB/TagA/CpsF CH55_3155 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase CH55_3156 IPR002293 Amino acid/polyamine transporter I CH55_3156 IPR004840 Amino acid permease, conserved site CH55_3156 IPR004841 Amino acid permease/ SLC12A domain CH55_316 IPR011990 Tetratricopeptide-like helical domain CH55_316 IPR019734 Tetratricopeptide repeat CH55_316 IPR030865 CH55_316 CH55_3162 IPR002686 Transposase IS200-like CH55_3162 IPR036515 CH55_3162 CH55_3163 IPR005254 Heme biosynthesis-associated TPR protein CH55_3163 IPR010817 HemY, N-terminal CH55_3163 IPR011990 Tetratricopeptide-like helical domain CH55_3164 IPR007470 HemX CH55_3165 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CH55_3165 IPR036108 CH55_3165 CH55_3166 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase CH55_3166 IPR022417 Porphobilinogen deaminase, N-terminal CH55_3166 IPR022418 Porphobilinogen deaminase, C-terminal CH55_3166 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CH55_3166 IPR036803 CH55_3166 CH55_3167 IPR000274 Adenylate cyclase, class-I CH55_3167 IPR024685 Adenylate cyclase class-I, N-terminal domain CH55_3167 IPR024686 Adenylate cyclase class-I, conserved site CH55_3168 IPR002908 Frataxin/CyaY CH55_3168 IPR020895 Frataxin conserved site CH55_3168 IPR036524 CH55_3168 CH55_3169 IPR032831 CH55_3169 CH55_317 IPR010985 Ribbon-helix-helix CH55_317 IPR013321 Arc-type ribbon-helix-helix CH55_3170 IPR001653 Diaminopimelate epimerase, DapF CH55_3170 IPR018510 Diaminopimelate epimerase, active site CH55_3171 IPR007435 Protein of unknown function DUF484 CH55_3171 IPR029016 GAF domain-like CH55_3172 IPR002104 Integrase, catalytic CH55_3172 IPR004107 Integrase, SAM-like, N-terminal CH55_3172 IPR010998 Integrase, Lambda-type, N-terminal CH55_3172 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_3172 IPR011931 Tyrosine recombinase XerC CH55_3172 IPR013762 Integrase-like, catalytic core CH55_3172 IPR023009 Tyrosine recombinase XerC/XerD CH55_3173 IPR006439 HAD hydrolase, subfamily IA CH55_3173 IPR023214 HAD-like domain CH55_3173 IPR036412 CH55_3173 CH55_3174 IPR005753 DNA helicase, ATP-dependent, UvrD type CH55_3174 IPR013986 DExx box DNA helicase domain CH55_3174 IPR014017 DNA helicase, UvrD-like, C-terminal CH55_3174 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3174 IPR034739 CH55_3174 CH55_3175 IPR001647 DNA-binding HTH domain, TetR-type CH55_3175 IPR009057 Homeodomain-like CH55_3176 IPR008322 Uncharacterised protein family UPF0261 CH55_3177 IPR009215 TIM-barrel domain, IGPS-like CH55_3177 IPR013785 Aldolase-type TIM barrel CH55_3177 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_3178 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CH55_3178 IPR004488 Magnesium/cobalt transport protein CorA CH55_3179 IPR000620 Drug/metabolite transporter CH55_3179 IPR004626 RarD protein CH55_318 IPR001754 Orotidine 5'-phosphate decarboxylase domain CH55_318 IPR011060 Ribulose-phosphate binding barrel CH55_318 IPR013785 Aldolase-type TIM barrel CH55_318 IPR014732 Orotidine 5'-phosphate decarboxylase CH55_318 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CH55_3180 IPR003736 Phenylacetic acid degradation-related domain CH55_3180 IPR006683 Thioesterase superfamily CH55_3180 IPR029069 HotDog domain CH55_3181 IPR003187 Phospholipase A1 CH55_3181 IPR036541 CH55_3181 CH55_3182 IPR001650 Helicase, C-terminal CH55_3182 IPR002121 HRDC domain CH55_3182 IPR004589 DNA helicase, ATP-dependent, RecQ type CH55_3182 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CH55_3182 IPR010997 HRDC-like CH55_3182 IPR011545 DEAD/DEAH box helicase domain CH55_3182 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_3182 IPR018982 RQC domain CH55_3182 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3182 IPR032284 CH55_3182 CH55_3182 IPR036388 CH55_3182 CH55_3183 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CH55_3183 IPR004778 Homoserine/Threonine efflux protein CH55_3184 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CH55_3185 IPR022742 Putative lysophospholipase CH55_3185 IPR029058 Alpha/Beta hydrolase fold CH55_3186 IPR000150 Cof protein CH55_3186 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH55_3186 IPR023214 HAD-like domain CH55_3186 IPR036412 CH55_3186 CH55_3187 IPR004954 Peptidase M60, viral enhancin protein CH55_3188 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CH55_3188 IPR030395 CH55_3188 CH55_3189 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CH55_3189 IPR006076 FAD dependent oxidoreductase CH55_3189 IPR007419 BFD-like [2Fe-2S]-binding domain CH55_3189 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit CH55_3189 IPR036188 CH55_3189 CH55_319 IPR001950 Translation initiation factor SUI1 CH55_319 IPR005872 Archaeal/bacterial translation initiation factor SUI1 CH55_319 IPR036877 CH55_319 CH55_3190 IPR003953 FAD binding domain CH55_3190 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit CH55_3190 IPR036188 CH55_3190 CH55_3191 IPR004017 Cysteine-rich domain CH55_3191 IPR009051 Alpha-helical ferredoxin CH55_3191 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit CH55_3191 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_3192 IPR014894 Protein DcrB CH55_3192 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH55_3193 IPR003744 Protein of unknown function DUF165 CH55_3194 IPR001455 TusA-like domain CH55_3194 IPR022931 Sulphurtransferase TusA CH55_3194 IPR036868 CH55_3194 CH55_3195 IPR001757 Cation-transporting P-type ATPase CH55_3195 IPR006121 Heavy metal-associated domain, HMA CH55_3195 IPR008250 P-type ATPase, A domain CH55_3195 IPR017969 Heavy-metal-associated, conserved site CH55_3195 IPR018303 P-type ATPase, phosphorylation site CH55_3195 IPR023214 HAD-like domain CH55_3195 IPR023298 P-type ATPase, transmembrane domain CH55_3195 IPR023299 P-type ATPase, cytoplasmic domain N CH55_3195 IPR027256 Cation-transporting P-type ATPase, subfamily IB CH55_3195 IPR036163 CH55_3195 CH55_3195 IPR036412 CH55_3195 CH55_3196 IPR012506 YhhN-like CH55_3197 IPR014949 Protein of unknown function DUF1820 CH55_3198 IPR019635 Protein of unknown function DUF2500 CH55_3199 IPR009525 Protein of unknown function DUF1145 CH55_32 IPR003382 Flavoprotein CH55_32 IPR004507 Decarboxylase UbiX/Pad1 CH55_32 IPR036551 CH55_32 CH55_320 IPR008816 Glycine zipper 2TM domain CH55_3200 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_3200 IPR004398 RNA methyltransferase, RsmD CH55_3200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3201 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CH55_3201 IPR003593 AAA+ ATPase domain CH55_3201 IPR004390 Signal-recognition particle receptor FtsY CH55_3201 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CH55_3201 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3201 IPR036225 CH55_3201 CH55_3202 IPR003439 ABC transporter-like CH55_3202 IPR003593 AAA+ ATPase domain CH55_3202 IPR005286 Cell division protein FtsE, ATP-binding CH55_3202 IPR017871 ABC transporter, conserved site CH55_3202 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3203 IPR003838 Permease FtsX-like CH55_3203 IPR004513 ABC transporter, cell division protein FtsX CH55_3204 IPR000943 RNA polymerase sigma-70 CH55_3204 IPR007627 RNA polymerase sigma-70 region 2 CH55_3204 IPR007630 RNA polymerase sigma-70 region 4 CH55_3204 IPR009042 RNA polymerase sigma-70 region 1.2 CH55_3204 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CH55_3204 IPR013324 RNA polymerase sigma factor, region 3/4 CH55_3204 IPR013325 RNA polymerase sigma factor, region 2 CH55_3204 IPR014284 RNA polymerase sigma-70 like domain CH55_3204 IPR036388 CH55_3204 CH55_3205 IPR002686 Transposase IS200-like CH55_3205 IPR036515 CH55_3205 CH55_3206 IPR000182 GNAT domain CH55_3206 IPR016181 Acyl-CoA N-acyltransferase CH55_3206 IPR032900 CH55_3206 CH55_3207 IPR000709 Leu/Ile/Val-binding protein CH55_3207 IPR028081 Leucine-binding protein domain CH55_3207 IPR028082 Periplasmic binding protein-like I CH55_3208 IPR001851 ABC transporter, permease CH55_3209 IPR001851 ABC transporter, permease CH55_3209 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CH55_321 IPR001303 Class II aldolase/adducin N-terminal CH55_321 IPR036409 CH55_321 CH55_3210 IPR003439 ABC transporter-like CH55_3210 IPR003593 AAA+ ATPase domain CH55_3210 IPR017871 ABC transporter, conserved site CH55_3210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3210 IPR032823 CH55_3210 CH55_3211 IPR003439 ABC transporter-like CH55_3211 IPR003593 AAA+ ATPase domain CH55_3211 IPR017871 ABC transporter, conserved site CH55_3211 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3211 IPR030660 CH55_3211 CH55_3215 IPR013783 Immunoglobulin-like fold CH55_3216 IPR008962 PapD-like CH55_3216 IPR013783 Immunoglobulin-like fold CH55_3218 IPR032636 CH55_3218 CH55_3219 IPR007540 Fimbrial major subunit, CS1-type CH55_322 IPR018680 Protein of unknown function DUF2164 CH55_3220 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_3220 IPR006061 Bacterial extracellular solute-binding family 1, conserved site CH55_3221 IPR000515 MetI-like domain CH55_3221 IPR035906 CH55_3221 CH55_3222 IPR000515 MetI-like domain CH55_3222 IPR035906 CH55_3222 CH55_3223 IPR003439 ABC transporter-like CH55_3223 IPR003593 AAA+ ATPase domain CH55_3223 IPR008995 Molybdate/tungstate binding, C-terminal CH55_3223 IPR013611 Transport-associated OB, type 2 CH55_3223 IPR017871 ABC transporter, conserved site CH55_3223 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3224 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CH55_3224 IPR030395 CH55_3224 CH55_3225 IPR004776 Auxin efflux carrier CH55_3226 IPR000847 Transcription regulator HTH, LysR CH55_3226 IPR005119 LysR, substrate-binding CH55_3226 IPR036388 CH55_3226 CH55_3226 IPR036390 CH55_3226 CH55_3227 IPR000620 Drug/metabolite transporter CH55_3227 IPR004779 Carboxylate/Amino Acid/Amine Transporter CH55_3228 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CH55_3228 IPR006276 Cobalamin-independent methionine synthase CH55_3228 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CH55_3228 IPR038071 CH55_3228 CH55_3229 IPR002925 Dienelactone hydrolase CH55_3229 IPR029058 Alpha/Beta hydrolase fold CH55_323 IPR001585 Transaldolase CH55_323 IPR004731 Transaldolase 3A/3B CH55_323 IPR013785 Aldolase-type TIM barrel CH55_323 IPR018225 Transaldolase, active site CH55_3230 IPR000845 Nucleoside phosphorylase domain CH55_3230 IPR010058 Uridine phosphorylase CH55_3230 IPR018016 Nucleoside phosphorylase, conserved site CH55_3230 IPR035994 CH55_3230 CH55_3231 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CH55_3231 IPR029021 Protein-tyrosine phosphatase-like CH55_3232 IPR003706 Carbon starvation protein CstA CH55_3232 IPR025299 CstA C-terminal domain CH55_3233 IPR032816 CH55_3233 CH55_3234 IPR003798 DNA recombination RmuC CH55_3235 IPR004033 UbiE/COQ5 methyltransferase CH55_3235 IPR023576 UbiE/COQ5 methyltransferase, conserved site CH55_3235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3236 IPR003033 SCP2 sterol-binding domain CH55_3236 IPR036527 CH55_3236 CH55_3237 IPR004147 UbiB domain CH55_3237 IPR010232 Probable protein kinase UbiB CH55_3237 IPR011009 Protein kinase-like domain CH55_3238 IPR003369 Sec-independent protein translocase protein TatA/B/E CH55_3238 IPR006312 Sec-independent protein translocase protein TatA/E CH55_3239 IPR018448 Twin-arginine translocation protein TatB CH55_324 IPR007423 Protein of unknown function DUF466 CH55_3240 IPR002033 Sec-independent periplasmic protein translocase TatC CH55_3240 IPR019820 Sec-independent periplasmic protein translocase, conserved site CH55_3241 IPR001130 TatD family CH55_3241 IPR018228 Deoxyribonuclease, TatD-related, conserved site CH55_3241 IPR032466 CH55_3241 CH55_3242 IPR001584 Integrase, catalytic core CH55_3242 IPR006120 Resolvase, HTH domain CH55_3242 IPR009057 Homeodomain-like CH55_3242 IPR012337 Ribonuclease H-like domain CH55_3243 IPR001270 ClpA/B family CH55_3243 IPR002611 IstB-like ATP-binding protein CH55_3243 IPR003593 AAA+ ATPase domain CH55_3243 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3243 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_3244 IPR001130 TatD family CH55_3244 IPR018228 Deoxyribonuclease, TatD-related, conserved site CH55_3244 IPR032466 CH55_3244 CH55_3245 IPR001731 Porphobilinogen synthase CH55_3245 IPR013785 Aldolase-type TIM barrel CH55_3245 IPR030656 CH55_3245 CH55_3246 IPR005824 KOW CH55_3246 IPR006645 NusG, N-terminal CH55_3246 IPR010215 Transcription antitermination protein RfaH CH55_3246 IPR036735 CH55_3246 CH55_3247 IPR002830 UbiD decarboxylyase family CH55_3247 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CH55_3248 IPR001221 Phenol hydroxylase reductase CH55_3248 IPR001433 Oxidoreductase FAD/NAD(P)-binding CH55_3248 IPR008333 Oxidoreductase, FAD-binding domain CH55_3248 IPR017938 Riboflavin synthase-like beta-barrel CH55_3248 IPR039261 CH55_3248 CH55_3249 IPR002155 Thiolase CH55_3249 IPR012805 Acetyl-CoA C-acyltransferase FadA CH55_3249 IPR016039 Thiolase-like CH55_3249 IPR020610 Thiolase, active site CH55_3249 IPR020613 Thiolase, conserved site CH55_3249 IPR020615 Thiolase, acyl-enzyme intermediate active site CH55_3249 IPR020616 Thiolase, N-terminal CH55_3249 IPR020617 Thiolase, C-terminal CH55_325 IPR003706 Carbon starvation protein CstA CH55_325 IPR025299 CstA C-terminal domain CH55_3250 IPR001753 Crotonase superfamily CH55_3250 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CH55_3250 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CH55_3250 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CH55_3250 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_3250 IPR012799 Fatty oxidation complex, alpha subunit FadB CH55_3250 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CH55_3250 IPR029045 ClpP/crotonase-like domain CH55_3250 IPR036291 CH55_3250 CH55_3251 IPR000994 Peptidase M24, structural domain CH55_3251 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CH55_3251 IPR022846 Xaa-Pro dipeptidase CH55_3251 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH55_3251 IPR036005 CH55_3251 CH55_3252 IPR001498 Impact, N-terminal CH55_3252 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_3252 IPR036956 CH55_3252 CH55_3253 IPR002686 Transposase IS200-like CH55_3253 IPR036515 CH55_3253 CH55_3254 IPR001498 Impact, N-terminal CH55_3254 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CH55_3254 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_3254 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CH55_3254 IPR035647 CH55_3254 CH55_3254 IPR036956 CH55_3254 CH55_3255 IPR003445 Cation transporter CH55_3255 IPR004772 Potassium uptake protein TrkH family CH55_3256 IPR001226 Flavodoxin, conserved site CH55_3256 IPR026816 Flavodoxin domain CH55_3256 IPR029039 Flavoprotein-like CH55_326 IPR001900 CH55_326 CH55_326 IPR003029 Ribosomal protein S1, RNA-binding domain CH55_326 IPR004476 Ribonuclease II/ribonuclease R CH55_326 IPR011129 Cold shock protein CH55_326 IPR011804 Ribonuclease II CH55_326 IPR012340 Nucleic acid-binding, OB-fold CH55_326 IPR013223 Ribonuclease B, N-terminal OB domain CH55_326 IPR022966 Ribonuclease II/R, conserved site CH55_3261 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CH55_3261 IPR006094 FAD linked oxidase, N-terminal CH55_3261 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CH55_3261 IPR016167 FAD-binding, type 2, subdomain 1 CH55_3261 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_3261 IPR036318 CH55_3261 CH55_3261 IPR036635 CH55_3261 CH55_3262 IPR003142 Biotin protein ligase, C-terminal CH55_3262 IPR004143 Biotin/lipoate A/B protein ligase CH55_3262 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CH55_3262 IPR004409 Biotin operon repressor, helix-turn-helix domain CH55_3262 IPR008988 Transcriptional repressor, C-terminal CH55_3262 IPR013196 Helix-turn-helix, type 11 CH55_3262 IPR030855 CH55_3262 CH55_3262 IPR036388 CH55_3262 CH55_3262 IPR036390 CH55_3262 CH55_3263 IPR004566 Bacterial pantothenate kinase CH55_3263 IPR006083 Phosphoribulokinase/uridine kinase CH55_3263 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3264 IPR000182 GNAT domain CH55_3264 IPR016181 Acyl-CoA N-acyltransferase CH55_3265 IPR001584 Integrase, catalytic core CH55_3265 IPR006120 Resolvase, HTH domain CH55_3265 IPR009057 Homeodomain-like CH55_3267 IPR001270 ClpA/B family CH55_3267 IPR002611 IstB-like ATP-binding protein CH55_3267 IPR003593 AAA+ ATPase domain CH55_3267 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3267 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_327 IPR011701 Major facilitator superfamily CH55_327 IPR036259 CH55_327 CH55_3272 IPR000795 Elongation factor, GTP-binding domain CH55_3272 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CH55_3272 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CH55_3272 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CH55_3272 IPR005225 Small GTP-binding protein domain CH55_3272 IPR009000 Translation protein, beta-barrel domain CH55_3272 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CH55_3272 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3272 IPR031157 CH55_3272 CH55_3273 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CH55_3273 IPR005807 SecE subunit of protein translocation complex CH55_3273 IPR038379 CH55_3273 CH55_3274 IPR001062 Transcription antitermination protein, NusG CH55_3274 IPR005824 KOW CH55_3274 IPR006645 NusG, N-terminal CH55_3274 IPR008991 Translation protein SH3-like domain CH55_3274 IPR014722 Ribosomal protein L2 domain 2 CH55_3274 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CH55_3274 IPR036735 CH55_3274 CH55_3275 IPR000911 Ribosomal protein L11/L12 CH55_3275 IPR006519 Ribosomal protein L11, bacterial-type CH55_3275 IPR020783 Ribosomal protein L11, C-terminal CH55_3275 IPR020784 Ribosomal protein L11, N-terminal CH55_3275 IPR020785 Ribosomal protein L11, conserved site CH55_3275 IPR036769 CH55_3275 CH55_3275 IPR036796 CH55_3275 CH55_3276 IPR002143 Ribosomal protein L1 CH55_3276 IPR005878 Ribosomal protein L1, bacterial-type CH55_3276 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CH55_3276 IPR023673 Ribosomal protein L1, conserved site CH55_3276 IPR023674 Ribosomal protein L1-like CH55_3276 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CH55_3277 IPR001790 Ribosomal protein L10/acidic P0 CH55_3277 IPR002363 Ribosomal protein L10, eubacterial, conserved site CH55_3277 IPR022973 Ribosomal protein L10 CH55_3278 IPR000206 Ribosomal protein L7/L12 CH55_3278 IPR008932 Ribosomal protein L7/L12, oligomerisation CH55_3278 IPR013823 Ribosomal protein L7/L12, C-terminal CH55_3278 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CH55_3278 IPR036235 CH55_3278 CH55_328 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_328 IPR036291 CH55_328 CH55_3280 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 CH55_3280 IPR007121 RNA polymerase, beta subunit, conserved site CH55_3280 IPR007641 RNA polymerase Rpb2, domain 7 CH55_3280 IPR007642 RNA polymerase Rpb2, domain 2 CH55_3280 IPR007644 RNA polymerase, beta subunit, protrusion CH55_3280 IPR007645 RNA polymerase Rpb2, domain 3 CH55_3280 IPR010243 DNA-directed RNA polymerase, beta subunit CH55_3280 IPR014724 RNA polymerase Rpb2, OB-fold CH55_3280 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CH55_3280 IPR037033 CH55_3280 CH55_3280 IPR037034 CH55_3280 CH55_3281 IPR000722 RNA polymerase, alpha subunit CH55_3281 IPR006592 RNA polymerase, N-terminal CH55_3281 IPR007066 RNA polymerase Rpb1, domain 3 CH55_3281 IPR007080 RNA polymerase Rpb1, domain 1 CH55_3281 IPR007081 RNA polymerase Rpb1, domain 5 CH55_3281 IPR007083 RNA polymerase Rpb1, domain 4 CH55_3281 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CH55_3281 IPR038120 CH55_3281 CH55_3282 IPR002686 Transposase IS200-like CH55_3282 IPR036515 CH55_3282 CH55_3283 IPR007197 Radical SAM CH55_3283 IPR010722 Biotin and thiamin synthesis-associated domain CH55_3283 IPR012726 Thiazole biosynthesis ThiH CH55_3283 IPR013785 Aldolase-type TIM barrel CH55_3284 IPR008867 Thiazole biosynthesis CH55_3284 IPR013785 Aldolase-type TIM barrel CH55_3284 IPR033983 CH55_3284 CH55_3285 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CH55_3285 IPR010035 ThiS, thiamine-biosynthesis CH55_3285 IPR012675 Beta-grasp domain CH55_3285 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH55_3286 IPR000594 UBA/THIF-type NAD/FAD binding fold CH55_3286 IPR035985 CH55_3286 CH55_3287 IPR013785 Aldolase-type TIM barrel CH55_3287 IPR022998 Thiamin phosphate synthase superfamily CH55_3287 IPR034291 CH55_3287 CH55_3287 IPR036206 CH55_3287 CH55_3288 IPR002817 Thiamine biosynthesis protein ThiC CH55_3288 IPR025747 ThiC-associated domain CH55_3288 IPR037509 CH55_3288 CH55_3288 IPR038521 CH55_3288 CH55_3289 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CH55_3289 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd CH55_3289 IPR038309 CH55_3289 CH55_329 IPR000445 Helix-hairpin-helix motif CH55_329 IPR003265 HhH-GPD domain CH55_329 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CH55_329 IPR004035 Endonuclease III, iron-sulphur binding site CH55_329 IPR004036 Endonuclease III-like, conserved site-2 CH55_329 IPR005759 Endonuclease III CH55_329 IPR011257 DNA glycosylase CH55_329 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CH55_3290 IPR000086 NUDIX hydrolase domain CH55_3290 IPR015376 Zinc ribbon, NADH pyrophosphatase CH55_3290 IPR015797 NUDIX hydrolase domain-like CH55_3290 IPR020084 NUDIX hydrolase, conserved site CH55_3290 IPR022925 NADH pyrophosphatase NudC CH55_3292 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CH55_3292 IPR006361 Uroporphyrinogen decarboxylase HemE CH55_3292 IPR038071 CH55_3292 CH55_3293 IPR007581 Endonuclease V CH55_3294 IPR007338 Protein of unknown function DUF416 CH55_3294 IPR023381 YP001051499.1-like domain CH55_3295 IPR000119 Histone-like bacterial DNA-binding protein CH55_3295 IPR010992 Integration host factor (IHF)-like DNA-binding domain CH55_3295 IPR020816 Histone-like DNA-binding protein, conserved site CH55_3296 IPR010858 Protein of unknown function DUF1481 CH55_3296 IPR016500 Uncharacterised conserved protein UCP006993 CH55_3297 IPR000115 Phosphoribosylglycinamide synthetase CH55_3297 IPR011054 Rudiment single hybrid motif CH55_3297 IPR013815 ATP-grasp fold, subdomain 1 CH55_3297 IPR016185 Pre-ATP-grasp domain CH55_3297 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CH55_3297 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CH55_3297 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CH55_3297 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CH55_3297 IPR037123 CH55_3297 CH55_3298 IPR002695 AICARFT/IMPCHase bienzyme CH55_3298 IPR011607 Methylglyoxal synthase-like domain CH55_3298 IPR016193 Cytidine deaminase-like CH55_3298 IPR024051 AICAR transformylase domain CH55_3298 IPR036914 CH55_3298 CH55_33 IPR001638 Extracellular solute-binding protein, family 3 CH55_33 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein CH55_33 IPR018313 Extracellular solute-binding protein, family 3, conserved site CH55_330 IPR003667 Electron transport complex, Rnf/Nqr CH55_330 IPR010968 Electron transport complex, RnfE CH55_3304 IPR002514 Transposase IS3/IS911family CH55_3304 IPR009057 Homeodomain-like CH55_3305 IPR001584 Integrase, catalytic core CH55_3305 IPR012337 Ribonuclease H-like domain CH55_3305 IPR025948 HTH-like domain CH55_3305 IPR036397 CH55_3305 CH55_3307 IPR002611 IstB-like ATP-binding protein CH55_3307 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3308 IPR002611 IstB-like ATP-binding protein CH55_3309 IPR001584 Integrase, catalytic core CH55_3309 IPR006120 Resolvase, HTH domain CH55_3309 IPR009057 Homeodomain-like CH55_3309 IPR012337 Ribonuclease H-like domain CH55_331 IPR007329 FMN-binding CH55_331 IPR010209 Electron transport complex, RnfG CH55_3310 IPR000873 AMP-dependent synthetase/ligase CH55_3310 IPR009081 Acyl carrier protein-like CH55_3310 IPR014030 Beta-ketoacyl synthase, N-terminal CH55_3310 IPR014031 Beta-ketoacyl synthase, C-terminal CH55_3310 IPR016039 Thiolase-like CH55_3310 IPR018201 Beta-ketoacyl synthase, active site CH55_3310 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CH55_3310 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CH55_3310 IPR036736 CH55_3310 CH55_3311 IPR000531 TonB-dependent receptor, beta-barrel CH55_3311 IPR012910 TonB-dependent receptor, plug CH55_3311 IPR036942 CH55_3311 CH55_3312 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH55_3312 IPR002933 Peptidase M20 CH55_3312 IPR010161 Peptidase M20B, tripeptide aminopeptidase CH55_3312 IPR011650 Peptidase M20, dimerisation domain CH55_3312 IPR036264 CH55_3312 CH55_3313 IPR004697 AbgT CH55_3314 IPR003591 Leucine-rich repeat, typical subtype CH55_3314 IPR029487 Novel E3 ligase domain CH55_3314 IPR032674 CH55_3314 CH55_3314 IPR032675 CH55_3314 CH55_3315 IPR032674 CH55_3315 CH55_3315 IPR032675 CH55_3315 CH55_3316 IPR029487 Novel E3 ligase domain CH55_3316 IPR032674 CH55_3316 CH55_3316 IPR032675 CH55_3316 CH55_3317 IPR005546 Autotransporter beta-domain CH55_3317 IPR006315 Outer membrane autotransporter barrel CH55_3317 IPR011050 Pectin lyase fold/virulence factor CH55_3317 IPR012332 P22 tailspike C-terminal domain-like CH55_3317 IPR024973 ESPR domain CH55_3317 IPR036709 CH55_3317 CH55_3319 IPR012927 ShET2 enterotoxin, N-terminal CH55_332 IPR004338 NADH-quinone reductase NQR2/RnfD CH55_332 IPR011303 Electron transport complex, RnfD CH55_3320 IPR001036 Acriflavin resistance protein CH55_3320 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CH55_3320 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_3321 IPR006143 RND efflux pump, membrane fusion protein CH55_3321 IPR032317 CH55_3321 CH55_3323 IPR000014 PAS domain CH55_3323 IPR000160 GGDEF domain CH55_3323 IPR007892 CHASE4 CH55_3323 IPR013767 PAS fold CH55_3323 IPR029787 Nucleotide cyclase CH55_3323 IPR035965 CH55_3323 CH55_3324 IPR001633 EAL domain CH55_3324 IPR035919 CH55_3324 CH55_3325 IPR001584 Integrase, catalytic core CH55_3325 IPR012337 Ribonuclease H-like domain CH55_3325 IPR025948 HTH-like domain CH55_3325 IPR036397 CH55_3325 CH55_3326 IPR009057 Homeodomain-like CH55_3326 IPR010921 Trp repressor/replication initiator CH55_3327 IPR000589 Ribosomal protein S15 CH55_3327 IPR005290 Ribosomal protein S15, bacterial-type CH55_3327 IPR009068 S15/NS1, RNA-binding CH55_3328 IPR002501 Pseudouridine synthase II CH55_3328 IPR014780 tRNA pseudouridine synthase II, TruB CH55_3328 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CH55_3328 IPR015947 PUA-like domain CH55_3328 IPR020103 Pseudouridine synthase, catalytic domain CH55_3328 IPR032819 CH55_3328 CH55_3328 IPR036974 CH55_3328 CH55_3329 IPR000238 Ribosome-binding factor A CH55_3329 IPR015946 K homology domain-like, alpha/beta CH55_3329 IPR020053 Ribosome-binding factor A, conserved site CH55_3329 IPR023799 Ribosome-binding factor A domain CH55_333 IPR009057 Homeodomain-like CH55_333 IPR011256 Regulatory factor, effector binding domain CH55_333 IPR018060 DNA binding HTH domain, AraC-type CH55_333 IPR020449 Transcription regulator HTH, AraC- type CH55_333 IPR029442 GyrI-like small molecule binding domain CH55_3330 IPR000178 Translation initiation factor aIF-2, bacterial-like CH55_3330 IPR000795 Elongation factor, GTP-binding domain CH55_3330 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CH55_3330 IPR005225 Small GTP-binding protein domain CH55_3330 IPR006847 Translation initiation factor IF-2, N-terminal CH55_3330 IPR009000 Translation protein, beta-barrel domain CH55_3330 IPR009061 DNA binding domain, putative CH55_3330 IPR013575 Initiation factor 2 associated domain, bacterial CH55_3330 IPR023115 Translation initiation factor IF- 2, domain 3 CH55_3330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3330 IPR036925 CH55_3330 CH55_3331 IPR004087 K Homology domain CH55_3331 IPR009019 K homology domain, prokaryotic type CH55_3331 IPR010213 Transcription termination factor NusA CH55_3331 IPR010214 Transcription termination factor NusA, C-terminal duplication CH55_3331 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CH55_3331 IPR012340 Nucleic acid-binding, OB-fold CH55_3331 IPR013735 Transcription factor NusA, N-terminal CH55_3331 IPR015946 K homology domain-like, alpha/beta CH55_3331 IPR022967 RNA-binding domain, S1 CH55_3331 IPR025249 KH domain, NusA-like CH55_3331 IPR030842 CH55_3331 CH55_3331 IPR036555 CH55_3331 CH55_3332 IPR003728 Ribosome maturation factor RimP CH55_3332 IPR028989 Ribosome maturation factor RimP, N-terminal CH55_3332 IPR028998 Ribosome maturation factor RimP, C-terminal CH55_3332 IPR035956 CH55_3332 CH55_3332 IPR036847 CH55_3332 CH55_3335 IPR004692 Preprotein translocase SecG subunit CH55_3336 IPR005841 Alpha-D-phosphohexomutase superfamily CH55_3336 IPR005843 Alpha-D-phosphohexomutase, C-terminal CH55_3336 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CH55_3336 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CH55_3336 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CH55_3336 IPR006352 Phosphoglucosamine mutase CH55_3336 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CH55_3336 IPR016066 Alpha-D-phosphohexomutase, conserved site CH55_3336 IPR036900 CH55_3336 CH55_3337 IPR000489 Pterin-binding CH55_3337 IPR006390 Dihydropteroate synthase CH55_3337 IPR011005 Dihydropteroate synthase-like CH55_3338 IPR000642 Peptidase M41 CH55_3338 IPR003593 AAA+ ATPase domain CH55_3338 IPR003959 ATPase, AAA-type, core CH55_3338 IPR003960 ATPase, AAA-type, conserved site CH55_3338 IPR005936 Peptidase, FtsH CH55_3338 IPR011546 Peptidase M41, FtsH extracellular CH55_3338 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3338 IPR037219 CH55_3338 CH55_3339 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CH55_3339 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria CH55_3339 IPR015507 Ribosomal RNA large subunit methyltransferase E CH55_3339 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_334 IPR009051 Alpha-helical ferredoxin CH55_334 IPR010208 Electron transport complex protein RnfC CH55_334 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CH55_334 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_334 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_334 IPR019554 Soluble ligand binding domain CH55_334 IPR026902 RnfC Barrel sandwich hybrid domain CH55_334 IPR037225 CH55_334 CH55_3340 IPR001890 RNA-binding, CRM domain CH55_3340 IPR017924 RNA-binding protein YhbY CH55_3340 IPR035920 CH55_3340 CH55_3341 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CH55_3341 IPR006359 Transcription elongation factor GreA CH55_3341 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CH55_3341 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CH55_3341 IPR023459 Transcription elongation factor GreA/GreB family CH55_3341 IPR028624 Transcription elongation factor GreA/GreB CH55_3341 IPR036805 CH55_3341 CH55_3341 IPR036953 CH55_3341 CH55_3342 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CH55_3342 IPR012338 Beta-lactamase/transpeptidase-like CH55_3343 IPR001789 Signal transduction response regulator, receiver domain CH55_3343 IPR001867 Signal transduction response regulator, C-terminal CH55_3343 IPR011006 CheY-like superfamily CH55_3343 IPR036388 CH55_3343 CH55_3344 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_3344 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_3344 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_3344 IPR036097 CH55_3344 CH55_3344 IPR036890 CH55_3344 CH55_3345 IPR006073 GTP binding domain CH55_3345 IPR006074 GTP1/OBG, conserved site CH55_3345 IPR006169 GTP1/OBG domain CH55_3345 IPR014100 GTP-binding protein Obg/CgtA CH55_3345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3345 IPR035101 CH55_3345 CH55_3345 IPR036726 CH55_3345 CH55_3346 IPR000620 Drug/metabolite transporter CH55_3347 IPR001684 Ribosomal protein L27 CH55_3347 IPR018261 Ribosomal protein L27, conserved site CH55_3348 IPR001787 Ribosomal protein L21 CH55_3348 IPR018258 Ribosomal protein L21, conserved site CH55_3348 IPR028909 Ribosomal protein L21-like CH55_3348 IPR036164 CH55_3348 CH55_3349 IPR000092 Polyprenyl synthetase CH55_3349 IPR008949 Terpenoid synthase CH55_3349 IPR033749 CH55_3349 CH55_335 IPR007202 4Fe-4S domain CH55_335 IPR010207 Electron transport complex, RnfB CH55_335 IPR011005 Dihydropteroate synthase-like CH55_335 IPR016463 Electron transport complex, RnfB, Proteobacteria CH55_335 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_3350 IPR003314 Transposase MuA/Repressor CI, DNA-binding CH55_3350 IPR009061 DNA binding domain, putative CH55_3350 IPR036388 CH55_3350 CH55_3351 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3351 IPR038722 CH55_3351 CH55_3352 IPR001236 Lactate/malate dehydrogenase, N-terminal CH55_3352 IPR001252 Malate dehydrogenase, active site CH55_3352 IPR001557 L-lactate/malate dehydrogenase CH55_3352 IPR010097 Malate dehydrogenase, type 1 CH55_3352 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CH55_3352 IPR022383 Lactate/malate dehydrogenase, C-terminal CH55_3352 IPR023958 Malate dehydrogenase, type 1, bacterial CH55_3352 IPR036291 CH55_3352 CH55_3353 IPR001669 Arginine repressor CH55_3353 IPR020899 Arginine repressor, C-terminal CH55_3353 IPR020900 Arginine repressor, DNA-binding domain CH55_3353 IPR036251 CH55_3353 CH55_3353 IPR036388 CH55_3353 CH55_3353 IPR036390 CH55_3353 CH55_3354 IPR010854 Domain of unknown function DUF1471 CH55_3354 IPR025543 Dodecin-like CH55_3354 IPR036275 CH55_3354 CH55_3355 IPR000713 Mur ligase, N-terminal CH55_3355 IPR004101 Mur ligase, C-terminal CH55_3355 IPR005757 Murein peptide ligase CH55_3355 IPR013221 Mur ligase, central CH55_3355 IPR036565 CH55_3355 CH55_3355 IPR036615 CH55_3355 CH55_3356 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase CH55_3356 IPR020548 Fructose-1,6-bisphosphatase, active site CH55_3356 IPR028343 Fructose-1,6-bisphosphatase CH55_3356 IPR033391 CH55_3356 CH55_3357 IPR008162 Inorganic pyrophosphatase CH55_3357 IPR036649 CH55_3357 CH55_3358 IPR009288 AIG2-like CH55_3358 IPR036568 CH55_3358 CH55_3359 IPR007452 Protein of unknown function DUF490 CH55_336 IPR003667 Electron transport complex, Rnf/Nqr CH55_336 IPR011293 Electron transport complex, RnfA CH55_3360 IPR007452 Protein of unknown function DUF490 CH55_3361 IPR000184 Bacterial surface antigen (D15) CH55_3361 IPR010827 Surface antigen variable number CH55_3361 IPR035243 CH55_3361 CH55_3362 IPR002569 Peptide methionine sulphoxide reductase MsrA CH55_3362 IPR036509 CH55_3362 CH55_3363 IPR000644 CBS domain CH55_3363 IPR002550 Domain of unknown function DUF21 CH55_3363 IPR005170 Transporter-associated domain CH55_3363 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_3363 IPR036318 CH55_3363 CH55_3364 IPR009491 Protein of unknown function DUF1107 CH55_3365 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CH55_3365 IPR036249 CH55_3365 CH55_3366 IPR000760 Inositol monophosphatase CH55_3366 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial CH55_3366 IPR020550 Inositol monophosphatase, conserved site CH55_3366 IPR020583 Inositol monophosphatase, metal-binding site CH55_3367 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CH55_3367 IPR006146 5'-Nucleotidase, conserved site CH55_3367 IPR006179 5'-Nucleotidase/apyrase CH55_3367 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CH55_3367 IPR008334 5'-Nucleotidase, C-terminal CH55_3367 IPR029052 Metallo-dependent phosphatase-like CH55_3367 IPR036907 CH55_3367 CH55_3368 IPR012312 Haemerythrin/HHE cation-binding motif CH55_3368 IPR019903 Repair of iron centres family CH55_3368 IPR023742 Iron-sulfur cluster repair protein YftE CH55_3369 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CH55_3369 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CH55_3369 IPR036944 CH55_3369 CH55_337 IPR019690 Protein of unknown function DUF2569 CH55_3370 IPR007340 Opacity-associated protein A CH55_3370 IPR013731 Opacity-associated protein A, N-terminal CH55_3371 IPR022231 Protein of unknown function DUF3757 CH55_3372 IPR002686 Transposase IS200-like CH55_3372 IPR036515 CH55_3372 CH55_3373 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CH55_3373 IPR020069 Ribosomal protein L9, C-terminal CH55_3373 IPR020070 Ribosomal protein L9, N-terminal CH55_3373 IPR020594 Ribosomal protein L9, bacteria/chloroplast CH55_3373 IPR036791 CH55_3373 CH55_3373 IPR036935 CH55_3373 CH55_3374 IPR001648 Ribosomal protein S18 CH55_3374 IPR018275 Ribosomal protein S18, conserved site CH55_3374 IPR036870 CH55_3374 CH55_3375 IPR000529 Ribosomal protein S6 CH55_3375 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CH55_3375 IPR020814 Ribosomal protein S6, plastid/chloroplast CH55_3375 IPR020815 Ribosomal protein S6, conserved site CH55_3375 IPR035980 CH55_3375 CH55_3377 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CH55_3377 IPR029058 Alpha/Beta hydrolase fold CH55_3378 IPR001584 Integrase, catalytic core CH55_3378 IPR006120 Resolvase, HTH domain CH55_3378 IPR009057 Homeodomain-like CH55_3378 IPR012337 Ribonuclease H-like domain CH55_3379 IPR001270 ClpA/B family CH55_3379 IPR002611 IstB-like ATP-binding protein CH55_3379 IPR003593 AAA+ ATPase domain CH55_3379 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3379 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_338 IPR003439 ABC transporter-like CH55_338 IPR011527 ABC transporter type 1, transmembrane domain CH55_338 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_338 IPR036640 CH55_338 CH55_3380 IPR010854 Domain of unknown function DUF1471 CH55_3380 IPR025543 Dodecin-like CH55_3380 IPR036275 CH55_3380 CH55_3381 IPR006089 Acyl-CoA dehydrogenase, conserved site CH55_3381 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CH55_3381 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CH55_3381 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CH55_3381 IPR036250 CH55_3381 CH55_3382 IPR001537 tRNA/rRNA methyltransferase, SpoU type CH55_3382 IPR004441 RNA methyltransferase TrmH family CH55_3382 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CH55_3382 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CH55_3382 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_3382 IPR029028 Alpha/beta knot methyltransferases CH55_3382 IPR029064 50S ribosomal protein L30e-like CH55_3383 IPR001900 CH55_3383 CH55_3383 IPR003029 Ribosomal protein S1, RNA-binding domain CH55_3383 IPR004476 Ribonuclease II/ribonuclease R CH55_3383 IPR011129 Cold shock protein CH55_3383 IPR011805 Ribonuclease R CH55_3383 IPR012340 Nucleic acid-binding, OB-fold CH55_3383 IPR013223 Ribonuclease B, N-terminal OB domain CH55_3383 IPR013668 Ribonuclease R winged-helix domain CH55_3383 IPR022967 RNA-binding domain, S1 CH55_3384 IPR000944 Transcription regulator Rrf2-like CH55_3384 IPR023761 Transcriptional repressor HTH, NsrR CH55_3384 IPR030489 CH55_3384 CH55_3384 IPR036388 CH55_3384 CH55_3384 IPR036390 CH55_3384 CH55_3385 IPR001114 Adenylosuccinate synthetase CH55_3385 IPR018220 Adenylosuccinate synthase, active site CH55_3385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3385 IPR033128 CH55_3385 CH55_3386 IPR019201 Protein of unknown function DUF2065 CH55_3387 IPR001107 Band 7 protein CH55_3387 IPR010200 HflC CH55_3387 IPR036013 CH55_3387 CH55_3388 IPR001107 Band 7 protein CH55_3388 IPR001972 Stomatin family CH55_3388 IPR010201 HflK CH55_3388 IPR020980 Menbrane protein HflK, N-terminal CH55_3388 IPR036013 CH55_3388 CH55_3389 IPR006073 GTP binding domain CH55_3389 IPR016496 GTPase HflX CH55_3389 IPR025121 GTPase HflX N-terminal domain CH55_3389 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3389 IPR032305 CH55_3389 CH55_3389 IPR035647 CH55_3389 CH55_339 IPR003997 RTX secretion protein D, Gram-negative bacteria CH55_339 IPR039562 CH55_339 CH55_3390 IPR005001 Host factor Hfq CH55_3390 IPR010920 Like-Sm (LSM) domain CH55_3391 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase CH55_3391 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3392 IPR002099 DNA mismatch repair protein family CH55_3392 IPR013507 DNA mismatch repair protein, C-terminal CH55_3392 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_3392 IPR014762 DNA mismatch repair, conserved site CH55_3392 IPR014790 MutL, C-terminal, dimerisation CH55_3392 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_3392 IPR020667 DNA mismatch repair protein, MutL CH55_3392 IPR036890 CH55_3392 CH55_3392 IPR037198 CH55_3392 CH55_3393 IPR002508 Cell wall hydrolase/autolysin, catalytic CH55_3393 IPR018392 LysM domain CH55_3393 IPR021731 AMIN domain CH55_3393 IPR036779 CH55_3393 CH55_3394 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CH55_3394 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3395 IPR000631 YjeF C-terminal domain CH55_3395 IPR004443 YjeF N-terminal domain CH55_3395 IPR029056 Ribokinase-like CH55_3395 IPR030677 CH55_3395 CH55_3395 IPR036652 CH55_3395 CH55_3396 IPR004453 Epoxyqueuosine reductase QueG CH55_3396 IPR009051 Alpha-helical ferredoxin CH55_3396 IPR013542 Domain of unknown function DUF1730 CH55_3396 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_34 IPR000515 MetI-like domain CH55_34 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_34 IPR035906 CH55_34 CH55_340 IPR003997 RTX secretion protein D, Gram-negative bacteria CH55_340 IPR006143 RND efflux pump, membrane fusion protein CH55_340 IPR006144 Secretion protein HlyD, conserved site CH55_3400 IPR012337 Ribonuclease H-like domain CH55_3400 IPR013520 Exonuclease, RNase T/DNA polymerase III CH55_3400 IPR022894 Oligoribonuclease CH55_3400 IPR036397 CH55_3400 CH55_3401 IPR004881 Ribosome biogenesis GTPase RsgA, putative CH55_3401 IPR010914 EngC GTPase CH55_3401 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3402 IPR003817 Phosphatidylserine decarboxylase-related CH55_3402 IPR033177 CH55_3402 CH55_3402 IPR033178 CH55_3402 CH55_3403 IPR006685 Mechanosensitive ion channel MscS CH55_3403 IPR006686 Mechanosensitive ion channel MscS, conserved site CH55_3403 IPR010920 Like-Sm (LSM) domain CH55_3403 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CH55_3403 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH55_3403 IPR023408 CH55_3403 CH55_3403 IPR024393 Mechanosensitive ion channel MscS, porin domain CH55_3403 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CH55_3404 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH55_3404 IPR004525 Elongation factor P--(R)-beta-lysine ligase CH55_3404 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CH55_3405 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CH55_3405 IPR003953 FAD binding domain CH55_3405 IPR005884 Fumarate reductase, flavoprotein subunit CH55_3405 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CH55_3405 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CH55_3405 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CH55_3405 IPR036188 CH55_3405 CH55_3405 IPR037099 CH55_3405 CH55_3406 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CH55_3406 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CH55_3406 IPR009051 Alpha-helical ferredoxin CH55_3406 IPR012675 Beta-grasp domain CH55_3406 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_3406 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_3406 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CH55_3406 IPR036010 CH55_3406 CH55_3407 IPR003510 Fumarate reductase, subunit C CH55_3407 IPR034804 CH55_3407 CH55_3408 IPR003418 Fumarate reductase, D subunit CH55_3408 IPR034804 CH55_3408 CH55_3409 IPR000390 Small multidrug resistance protein family CH55_341 IPR003439 ABC transporter-like CH55_341 IPR003593 AAA+ ATPase domain CH55_341 IPR005074 Peptidase C39, bacteriocin processing CH55_341 IPR010132 ATPase, type I secretion system, HlyB CH55_341 IPR011527 ABC transporter type 1, transmembrane domain CH55_341 IPR017871 ABC transporter, conserved site CH55_341 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_341 IPR036640 CH55_341 CH55_3410 IPR001059 Translation elongation factor P/YeiP, central CH55_3410 IPR008991 Translation protein SH3-like domain CH55_3410 IPR011768 Translation elongation factor P CH55_3410 IPR012340 Nucleic acid-binding, OB-fold CH55_3410 IPR013185 Translation elongation factor, KOW-like CH55_3410 IPR013852 Translation elongation factor P/YeiP, conserved site CH55_3410 IPR014722 Ribosomal protein L2 domain 2 CH55_3410 IPR015365 Elongation factor P, C-terminal CH55_3410 IPR020599 Translation elongation factor P/YeiP CH55_3411 IPR003739 Lysine-2,3-aminomutase family CH55_3411 IPR007197 Radical SAM CH55_3411 IPR013785 Aldolase-type TIM barrel CH55_3411 IPR022462 Lysine-2,3-aminomutase-like CH55_3412 IPR025294 Protein of unknown function DUF4156 CH55_3413 IPR001844 Chaperonin Cpn60 CH55_3413 IPR002423 Chaperonin Cpn60/TCP-1 CH55_3413 IPR018370 Chaperonin Cpn60, conserved site CH55_3413 IPR027409 GroEL-like apical domain CH55_3413 IPR027410 TCP-1-like chaperonin intermediate domain CH55_3413 IPR027413 GroEL-like equatorial domain CH55_3414 IPR011032 GroES (chaperonin 10)-like CH55_3414 IPR018369 Chaperonin Cpn10, conserved site CH55_3414 IPR020818 Chaperonin Cpn10 CH55_3414 IPR037124 CH55_3414 CH55_3415 IPR007313 FxsA cytoplasmic membrane protein CH55_3416 IPR000362 Fumarate lyase family CH55_3416 IPR004708 Aspartate ammonia-lyase CH55_3416 IPR008948 L-Aspartase-like CH55_3416 IPR018951 Fumarase C, C-terminal CH55_3416 IPR020557 Fumarate lyase, conserved site CH55_3416 IPR022761 Fumarate lyase, N-terminal CH55_3416 IPR024083 Fumarase/histidase, N-terminal CH55_3417 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CH55_3418 IPR004323 Divalent ion tolerance protein, CutA CH55_3418 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH55_3418 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH55_3418 IPR023700 Divalent cation tolerance protein CutA, bacteria CH55_3419 IPR003834 Cytochrome c assembly protein, transmembrane domain CH55_3419 IPR017937 Thioredoxin, conserved site CH55_3419 IPR022910 Thiol:disulphide interchange protein DsbD CH55_3419 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CH55_3419 IPR036249 CH55_3419 CH55_3419 IPR036929 CH55_3419 CH55_3420 IPR006478 Formate dehydrogenase, alpha subunit CH55_3420 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH55_3420 IPR006656 Molybdopterin oxidoreductase CH55_3420 IPR006657 Molydopterin dinucleotide-binding domain CH55_3420 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH55_3420 IPR009010 Aspartate decarboxylase-like domain CH55_3420 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH55_3421 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_3421 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_3422 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CH55_3422 IPR009051 Alpha-helical ferredoxin CH55_3422 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_3422 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_3422 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_3422 IPR028261 Dihydroprymidine dehydrogenase domain II CH55_3422 IPR036188 CH55_3422 CH55_3423 IPR001647 DNA-binding HTH domain, TetR-type CH55_3423 IPR009057 Homeodomain-like CH55_3423 IPR036271 CH55_3423 CH55_3425 IPR004954 Peptidase M60, viral enhancin protein CH55_3425 IPR031161 CH55_3425 CH55_3427 IPR008992 Enterotoxin CH55_3429 IPR004673 L-rhamnose-proton symport, RhaT CH55_343 IPR003762 L-arabinose isomerase CH55_343 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CH55_343 IPR009015 L-fucose isomerase, N-terminal/central domain CH55_343 IPR024664 L-arabinose isomerase, C-terminal CH55_343 IPR038583 CH55_343 CH55_3430 IPR003313 AraC-type arabinose-binding/dimerisation domain CH55_3430 IPR009057 Homeodomain-like CH55_3430 IPR011051 RmlC-like cupin domain CH55_3430 IPR014710 RmlC-like jelly roll fold CH55_3430 IPR018060 DNA binding HTH domain, AraC-type CH55_3430 IPR018062 HTH domain AraC-type, conserved site CH55_3430 IPR020449 Transcription regulator HTH, AraC- type CH55_3430 IPR023699 Transcription activator HTH, RhaR CH55_3431 IPR003313 AraC-type arabinose-binding/dimerisation domain CH55_3431 IPR009057 Homeodomain-like CH55_3431 IPR014710 RmlC-like jelly roll fold CH55_3431 IPR018060 DNA binding HTH domain, AraC-type CH55_3431 IPR020449 Transcription regulator HTH, AraC- type CH55_3431 IPR023609 Transcription regulator HTH, RhaS CH55_3431 IPR037923 CH55_3431 CH55_3434 IPR000577 CH55_3434 CH55_3434 IPR013449 Rhamnulokinase CH55_3434 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_3434 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_3435 IPR009308 Rhamnose isomerase CH55_3435 IPR036237 CH55_3435 CH55_3436 IPR001303 Class II aldolase/adducin N-terminal CH55_3436 IPR013447 Rhamnulose-1-phosphate aldolase CH55_3436 IPR036409 CH55_3436 CH55_3437 IPR001670 Alcohol dehydrogenase, iron-type CH55_3437 IPR013460 Lactaldehyde reductase CH55_3437 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH55_3438 IPR008000 Rhamnose mutarotase CH55_3438 IPR011008 Dimeric alpha-beta barrel CH55_3438 IPR013448 L-rhamnose 1-epimerase CH55_3439 IPR000424 Primosome PriB/single-strand DNA-binding CH55_3439 IPR011344 Single-stranded DNA-binding protein CH55_3439 IPR012340 Nucleic acid-binding, OB-fold CH55_344 IPR005929 L-ribulokinase CH55_344 IPR018484 Carbohydrate kinase, FGGY, N-terminal CH55_344 IPR018485 Carbohydrate kinase, FGGY, C-terminal CH55_3440 IPR003439 ABC transporter-like CH55_3440 IPR004602 UvrABC system subunit A CH55_3440 IPR017871 ABC transporter, conserved site CH55_3440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3441 IPR007351 Uncharacterised protein YjbR CH55_3441 IPR038056 CH55_3441 CH55_3442 IPR000796 Aspartate/other aminotransferase CH55_3442 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CH55_3442 IPR004839 Aminotransferase, class I/classII CH55_3442 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3442 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3442 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3443 IPR000821 Alanine racemase CH55_3443 IPR001608 Alanine racemase, N-terminal CH55_3443 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH55_3443 IPR011079 Alanine racemase, C-terminal CH55_3443 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CH55_3443 IPR029066 PLP-binding barrel CH55_3444 IPR003593 AAA+ ATPase domain CH55_3444 IPR007692 DNA helicase, DnaB type CH55_3444 IPR007693 DNA helicase, DnaB-like, N-terminal CH55_3444 IPR007694 DNA helicase, DnaB-like, C-terminal CH55_3444 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CH55_3444 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3444 IPR036185 CH55_3444 CH55_3445 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CH55_3445 IPR011032 GroES (chaperonin 10)-like CH55_3445 IPR013149 Alcohol dehydrogenase, C-terminal CH55_3445 IPR013154 Alcohol dehydrogenase GroES-like CH55_3445 IPR020843 Polyketide synthase, enoylreductase CH55_3445 IPR036291 CH55_3445 CH55_3446 IPR014318 Phage shock protein, PspG CH55_3447 IPR001269 tRNA-dihydrouridine synthase CH55_3447 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN CH55_3447 IPR013785 Aldolase-type TIM barrel CH55_3447 IPR018517 tRNA-dihydrouridine synthase, conserved site CH55_3448 IPR002481 Ferric-uptake regulator CH55_3448 IPR036388 CH55_3448 CH55_3448 IPR036390 CH55_3448 CH55_3449 IPR006197 Peptidase S24, LexA-like CH55_3449 IPR006199 LexA repressor, DNA-binding domain CH55_3449 IPR006200 LexA repressor CH55_3449 IPR015927 Peptidase S24/S26A/S26B/S26C CH55_3449 IPR036286 CH55_3449 CH55_3449 IPR036388 CH55_3449 CH55_3449 IPR036390 CH55_3449 CH55_345 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH55_345 IPR026266 L-arabinose-binding periplasmic protein CH55_345 IPR028082 Periplasmic binding protein-like I CH55_3450 IPR000829 Diacylglycerol kinase, prokaryotic CH55_3450 IPR036945 CH55_3450 CH55_3451 IPR002123 Phospholipid/glycerol acyltransferase CH55_3451 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CH55_3451 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CH55_3452 IPR000537 UbiA prenyltransferase family CH55_3452 IPR006370 4-hydroxybenzoate polyprenyl transferase CH55_3452 IPR030470 CH55_3452 CH55_3453 IPR007440 Chorismate--pyruvate lyase CH55_3453 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CH55_3454 IPR005546 Autotransporter beta-domain CH55_3454 IPR006315 Outer membrane autotransporter barrel CH55_3454 IPR011050 Pectin lyase fold/virulence factor CH55_3454 IPR012332 P22 tailspike C-terminal domain-like CH55_3454 IPR036709 CH55_3454 CH55_3455 IPR003961 Fibronectin, type III CH55_3455 IPR006094 FAD linked oxidase, N-terminal CH55_3455 IPR012951 Berberine/berberine-like CH55_3455 IPR013783 Immunoglobulin-like fold CH55_3455 IPR036116 CH55_3455 CH55_3455 IPR036318 CH55_3455 CH55_3455 IPR036573 CH55_3455 CH55_3456 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain CH55_3457 IPR036259 CH55_3457 CH55_3458 IPR008962 PapD-like CH55_3458 IPR013783 Immunoglobulin-like fold CH55_3458 IPR016147 PapD, N-terminal, bacterial CH55_3458 IPR036316 CH55_3458 CH55_3459 IPR000015 Outer membrane usher protein CH55_3459 IPR018030 Fimbrial membrane usher, conserved site CH55_3459 IPR025885 PapC, N-terminal domain CH55_3459 IPR025949 PapC-like, C-terminal domain CH55_3459 IPR037224 CH55_3459 CH55_346 IPR003439 ABC transporter-like CH55_346 IPR003593 AAA+ ATPase domain CH55_346 IPR017871 ABC transporter, conserved site CH55_346 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3460 IPR010546 Protein of unknown function DUF1120 CH55_3461 IPR003325 TerD domain CH55_3462 IPR003325 TerD domain CH55_3463 IPR005496 Integral membrane protein TerC CH55_3463 IPR022369 Integral membrane protein TerC, riboswitch-linked CH55_3464 IPR007791 Heat shock protein DnaJ-like protein DjlA CH55_3464 IPR029024 TerB-like CH55_3465 IPR003325 TerD domain CH55_3465 IPR017115 Tellurite resistance, TerA CH55_3466 IPR003325 TerD domain CH55_3467 IPR011226 ATP-grasp family CH55_3468 IPR011214 Uncharacterised conserved protein UCP020967 CH55_3468 IPR022537 TRSP domain CH55_3468 IPR029057 Phosphoribosyltransferase-like CH55_3469 IPR023214 HAD-like domain CH55_3469 IPR024197 Uncharacterised conserved protein UCP030802 CH55_3469 IPR036412 CH55_3469 CH55_347 IPR001851 ABC transporter, permease CH55_3470 IPR011215 Phosphoribosyl transferase CH55_3470 IPR028157 PELOTA RNA-binding domain CH55_3471 IPR011206 Citrate lyase beta subunit-like CH55_3471 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_3471 IPR039480 CH55_3471 CH55_3472 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW CH55_3472 IPR036390 CH55_3472 CH55_3473 IPR003171 Methylenetetrahydrofolate reductase CH55_3473 IPR029041 FAD-linked oxidoreductase-like CH55_3474 IPR006638 Elongator protein 3/MiaB/NifB CH55_3474 IPR007197 Radical SAM CH55_3474 IPR023404 Radical SAM, alpha/beta horseshoe CH55_3474 IPR026332 Putative heme utilization radical SAM enzyme HutW CH55_3475 IPR010413 Heme utilization carrier protein HutX like CH55_3476 IPR016040 NAD(P)-binding domain CH55_3476 IPR036291 CH55_3476 CH55_3477 IPR000531 TonB-dependent receptor, beta-barrel CH55_3477 IPR010916 TonB box, conserved site CH55_3477 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CH55_3477 IPR011276 TonB-dependent haem/haemoglobin receptor CH55_3477 IPR012910 TonB-dependent receptor, plug CH55_3477 IPR036942 CH55_3477 CH55_3477 IPR037066 CH55_3477 CH55_3478 IPR007845 Haemin-degrading HemS/ChuX domain CH55_3479 IPR002491 ABC transporter periplasmic binding domain CH55_348 IPR003313 AraC-type arabinose-binding/dimerisation domain CH55_348 IPR009057 Homeodomain-like CH55_348 IPR018060 DNA binding HTH domain, AraC-type CH55_348 IPR018062 HTH domain AraC-type, conserved site CH55_348 IPR020449 Transcription regulator HTH, AraC- type CH55_348 IPR037923 CH55_348 CH55_3480 IPR000522 ABC transporter, permease protein CH55_3480 IPR037294 CH55_3480 CH55_3481 IPR003439 ABC transporter-like CH55_3481 IPR003593 AAA+ ATPase domain CH55_3481 IPR017871 ABC transporter, conserved site CH55_3481 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3482 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CH55_3482 IPR006233 Cystathionine beta-lyase, bacterial CH55_3482 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3482 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3482 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3484 IPR000847 Transcription regulator HTH, LysR CH55_3484 IPR005119 LysR, substrate-binding CH55_3484 IPR036388 CH55_3484 CH55_3484 IPR036390 CH55_3484 CH55_3485 IPR001455 TusA-like domain CH55_3485 IPR036868 CH55_3485 CH55_3486 IPR007272 Sulphur transport domain CH55_3487 IPR006135 Type III secretion system substrate exporter CH55_3487 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CH55_3487 IPR029025 Type III secretion system substrate exporter, C-terminal CH55_3488 IPR002010 Type III secretion system inner membrane R protein CH55_3488 IPR006304 Type III secretion protein SpaR/YscT CH55_3489 IPR002191 Bacterial export protein family 3 CH55_3489 IPR006306 Type III secretion protein HrpO CH55_349 IPR000683 Oxidoreductase, N-terminal CH55_349 IPR004104 Oxidoreductase, C-terminal CH55_349 IPR036291 CH55_349 CH55_3490 IPR005773 Yop virulence translocation protein R CH55_3490 IPR005838 Type III secretion system inner membrane P protein CH55_3491 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CH55_3491 IPR001543 Surface presentation of antigen (SpoA) CH55_3491 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO CH55_3491 IPR036429 CH55_3491 CH55_3494 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_3494 IPR003593 AAA+ ATPase domain CH55_3494 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CH55_3494 IPR005714 ATPase, type III secretion system, FliI/YscN CH55_3494 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH55_3494 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3495 IPR001712 Type III secretion system FHIPEP CH55_3496 IPR001712 Type III secretion system FHIPEP CH55_3496 IPR025505 FHIPEP conserved site CH55_3497 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E CH55_3497 IPR012842 Type III secretion system HrpE/YscL CH55_3498 IPR025292 Type III secretion system protein CH55_3499 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CH55_3499 IPR006182 Secretory protein YscJ/FliF CH55_35 IPR000515 MetI-like domain CH55_35 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_35 IPR035906 CH55_35 CH55_350 IPR016833 Putative sodium bile acid cotransporter CH55_350 IPR038770 CH55_350 CH55_3500 IPR012670 Type III secretion system, YscI/HrpB CH55_3501 IPR010437 Type III secretion system SsaH CH55_3502 IPR011841 Type III secretion system, needle protein CH55_3502 IPR021123 Type III secretion, needle-protein-like CH55_3502 IPR037203 CH55_3502 CH55_3503 IPR009057 Homeodomain-like CH55_3503 IPR018060 DNA binding HTH domain, AraC-type CH55_3503 IPR020449 Transcription regulator HTH, AraC- type CH55_3504 IPR012671 Type III secretion system, secretion protein E CH55_3505 IPR012843 Type III secretion system YscD/HrpQ CH55_3505 IPR032034 CH55_3505 CH55_3506 IPR003522 Type III secretion system outer membrane pore YscC/HrcC CH55_3506 IPR004845 Type II secretion system GspD, conserved site CH55_3506 IPR004846 Type II/III secretion system CH55_3506 IPR005644 NolW-like CH55_3506 IPR038591 CH55_3506 CH55_3507 IPR001789 Signal transduction response regulator, receiver domain CH55_3507 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_3507 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_3507 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_3507 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CH55_3507 IPR011006 CheY-like superfamily CH55_3507 IPR036097 CH55_3507 CH55_3507 IPR036641 CH55_3507 CH55_3507 IPR036890 CH55_3507 CH55_3508 IPR000792 Transcription regulator LuxR, C-terminal CH55_3508 IPR001789 Signal transduction response regulator, receiver domain CH55_3508 IPR011006 CheY-like superfamily CH55_3508 IPR016032 Signal transduction response regulator, C-terminal effector CH55_3509 IPR001991 Sodium:dicarboxylate symporter CH55_3509 IPR018107 Sodium:dicarboxylate symporter, conserved site CH55_3509 IPR034703 CH55_3509 CH55_3509 IPR036458 CH55_3509 CH55_3510 IPR000873 AMP-dependent synthetase/ligase CH55_3510 IPR011904 Acetate-CoA ligase CH55_3510 IPR020845 AMP-binding, conserved site CH55_3510 IPR025110 AMP-binding enzyme C-terminal domain CH55_3510 IPR032387 CH55_3510 CH55_3511 IPR007436 Protein of unknown function DUF485 CH55_3512 IPR001734 Sodium/solute symporter CH55_3512 IPR014083 Cation/acetate symporter ActP CH55_3512 IPR018212 Sodium/solute symporter, conserved site CH55_3512 IPR038377 CH55_3512 CH55_3513 IPR025890 Abhydrolase, bacterial CH55_3513 IPR029058 Alpha/Beta hydrolase fold CH55_3514 IPR001584 Integrase, catalytic core CH55_3514 IPR006120 Resolvase, HTH domain CH55_3514 IPR009057 Homeodomain-like CH55_3514 IPR012337 Ribonuclease H-like domain CH55_3515 IPR001270 ClpA/B family CH55_3515 IPR002611 IstB-like ATP-binding protein CH55_3515 IPR003593 AAA+ ATPase domain CH55_3515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3515 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_3516 IPR000873 AMP-dependent synthetase/ligase CH55_3516 IPR001242 Condensation domain CH55_3516 IPR006162 Phosphopantetheine attachment site CH55_3516 IPR009081 Acyl carrier protein-like CH55_3516 IPR010071 Amino acid adenylation domain CH55_3516 IPR020845 AMP-binding, conserved site CH55_3516 IPR023213 Chloramphenicol acetyltransferase-like domain CH55_3516 IPR036736 CH55_3516 CH55_3517 IPR000873 AMP-dependent synthetase/ligase CH55_3517 IPR010071 Amino acid adenylation domain CH55_3517 IPR020845 AMP-binding, conserved site CH55_3518 IPR009081 Acyl carrier protein-like CH55_3518 IPR029058 Alpha/Beta hydrolase fold CH55_3518 IPR036736 CH55_3518 CH55_3519 IPR001242 Condensation domain CH55_3519 IPR023213 Chloramphenicol acetyltransferase-like domain CH55_352 IPR010352 Protein of unknown function DUF945 CH55_3520 IPR000873 AMP-dependent synthetase/ligase CH55_3520 IPR001031 Thioesterase CH55_3520 IPR006162 Phosphopantetheine attachment site CH55_3520 IPR009081 Acyl carrier protein-like CH55_3520 IPR010071 Amino acid adenylation domain CH55_3520 IPR013217 Methyltransferase type 12 CH55_3520 IPR020459 AMP-binding CH55_3520 IPR020845 AMP-binding, conserved site CH55_3520 IPR029058 Alpha/Beta hydrolase fold CH55_3520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3520 IPR036736 CH55_3520 CH55_3521 IPR036291 CH55_3521 CH55_3523 IPR000683 Oxidoreductase, N-terminal CH55_3523 IPR010091 Thiazolinyl imide reductase CH55_3523 IPR036291 CH55_3523 CH55_3524 IPR001031 Thioesterase CH55_3524 IPR029058 Alpha/Beta hydrolase fold CH55_3525 IPR011701 Major facilitator superfamily CH55_3525 IPR036259 CH55_3525 CH55_3526 IPR003439 ABC transporter-like CH55_3526 IPR003593 AAA+ ATPase domain CH55_3526 IPR011527 ABC transporter type 1, transmembrane domain CH55_3526 IPR017871 ABC transporter, conserved site CH55_3526 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3526 IPR036640 CH55_3526 CH55_3527 IPR003439 ABC transporter-like CH55_3527 IPR003593 AAA+ ATPase domain CH55_3527 IPR011527 ABC transporter type 1, transmembrane domain CH55_3527 IPR017871 ABC transporter, conserved site CH55_3527 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3527 IPR036640 CH55_3527 CH55_353 IPR001250 Mannose-6-phosphate isomerase, type I CH55_353 IPR011051 RmlC-like cupin domain CH55_353 IPR014710 RmlC-like jelly roll fold CH55_353 IPR016305 Mannose-6-phosphate isomerase CH55_353 IPR018050 Phosphomannose isomerase, type I, conserved site CH55_3531 IPR003474 Gluconate transporter CH55_3533 IPR005546 Autotransporter beta-domain CH55_3533 IPR006315 Outer membrane autotransporter barrel CH55_3533 IPR011050 Pectin lyase fold/virulence factor CH55_3533 IPR012332 P22 tailspike C-terminal domain-like CH55_3533 IPR036709 CH55_3533 CH55_3534 IPR005546 Autotransporter beta-domain CH55_3534 IPR006315 Outer membrane autotransporter barrel CH55_3534 IPR011050 Pectin lyase fold/virulence factor CH55_3534 IPR012332 P22 tailspike C-terminal domain-like CH55_3534 IPR036709 CH55_3534 CH55_3535 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH55_3535 IPR010609 Gp5, C-terminal CH55_3535 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH55_3535 IPR037026 CH55_3535 CH55_3536 IPR011990 Tetratricopeptide-like helical domain CH55_3537 IPR001826 RHS protein CH55_3537 IPR006530 YD repeat CH55_3537 IPR022385 Rhs repeat-associated core CH55_3537 IPR031325 CH55_3537 CH55_354 IPR000362 Fumarate lyase family CH55_354 IPR005677 Fumarate hydratase, class II CH55_354 IPR008948 L-Aspartase-like CH55_354 IPR018951 Fumarase C, C-terminal CH55_354 IPR020557 Fumarate lyase, conserved site CH55_354 IPR022761 Fumarate lyase, N-terminal CH55_354 IPR024083 Fumarase/histidase, N-terminal CH55_3540 IPR001898 Sodium/sulphate symporter CH55_3540 IPR031312 CH55_3540 CH55_3541 IPR000843 Transcription regulator HTH, LacI CH55_3541 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3541 IPR028082 Periplasmic binding protein-like I CH55_3542 IPR001584 Integrase, catalytic core CH55_3542 IPR012337 Ribonuclease H-like domain CH55_3542 IPR025948 HTH-like domain CH55_3542 IPR036397 CH55_3542 CH55_3543 IPR001547 Glycoside hydrolase, family 5 CH55_3543 IPR017853 Glycoside hydrolase, superfamily CH55_3544 IPR009057 Homeodomain-like CH55_3544 IPR010921 Trp repressor/replication initiator CH55_3545 IPR001927 Sodium:galactoside symporter CH55_3545 IPR036259 CH55_3545 CH55_3546 IPR000531 TonB-dependent receptor, beta-barrel CH55_3546 IPR010105 TonB-dependent siderophore receptor CH55_3546 IPR010917 TonB-dependent receptor, conserved site CH55_3546 IPR012910 TonB-dependent receptor, plug CH55_3546 IPR036942 CH55_3546 CH55_3546 IPR037066 CH55_3546 CH55_3547 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CH55_3547 IPR036188 CH55_3547 CH55_3548 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CH55_3548 IPR022770 Ferric iron reductase FhuF domain CH55_3549 IPR016181 Acyl-CoA N-acyltransferase CH55_3549 IPR019432 Siderophore biosynthesis protein, conserved domain CH55_355 IPR008865 DNA replication terminus site-binding protein CH55_355 IPR036381 CH55_355 CH55_355 IPR036384 CH55_355 CH55_3550 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CH55_3550 IPR022770 Ferric iron reductase FhuF domain CH55_3551 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CH55_3552 IPR011701 Major facilitator superfamily CH55_3552 IPR036259 CH55_3552 CH55_3553 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CH55_3553 IPR015889 Intradiol ring-cleavage dioxygenase, core CH55_3554 IPR010126 Esterase, PHB depolymerase CH55_3554 IPR029058 Alpha/Beta hydrolase fold CH55_3555 IPR001690 Autoinducer synthesis protein CH55_3555 IPR016181 Acyl-CoA N-acyltransferase CH55_3555 IPR018311 Autoinducer synthesis, conserved site CH55_3556 IPR000792 Transcription regulator LuxR, C-terminal CH55_3556 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CH55_3556 IPR016032 Signal transduction response regulator, C-terminal effector CH55_3556 IPR036388 CH55_3556 CH55_3556 IPR036693 CH55_3556 CH55_3558 IPR003675 CAAX amino terminal protease CH55_356 IPR005829 Sugar transporter, conserved site CH55_356 IPR011701 Major facilitator superfamily CH55_356 IPR036259 CH55_356 CH55_3560 IPR003220 InsA N-terminal domain CH55_3560 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain CH55_3563 IPR008312 Uncharacterised conserved protein UCP028301 CH55_3564 IPR010269 Protein of unknown function DUF877 CH55_3565 IPR010263 Protein of unknown function DUF876 CH55_3566 IPR017732 Type IV / VI secretion system, DotU CH55_3566 IPR038522 CH55_3566 CH55_3567 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_3567 IPR036737 CH55_3567 CH55_3568 IPR008514 Type VI secretion system effector, Hcp CH55_3568 IPR036624 CH55_3568 CH55_3569 IPR001270 ClpA/B family CH55_3569 IPR003593 AAA+ ATPase domain CH55_3569 IPR003959 ATPase, AAA-type, core CH55_3569 IPR017729 Type VI secretion system, ATPase ClpV1 CH55_3569 IPR018368 ClpA/B, conserved site 1 CH55_3569 IPR019489 Clp ATPase, C-terminal CH55_3569 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3569 IPR036628 CH55_3569 CH55_357 IPR000847 Transcription regulator HTH, LysR CH55_357 IPR005119 LysR, substrate-binding CH55_357 IPR036388 CH55_357 CH55_357 IPR036390 CH55_357 CH55_3570 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH55_3570 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH55_3570 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CH55_3570 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CH55_3570 IPR037026 CH55_3570 CH55_3571 IPR011055 Duplicated hybrid motif CH55_3571 IPR023346 Lysozyme-like domain CH55_3572 IPR003220 InsA N-terminal domain CH55_3572 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain CH55_3573 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CH55_3574 IPR011055 Duplicated hybrid motif CH55_3574 IPR016047 Peptidase M23 CH55_3574 IPR023346 Lysozyme-like domain CH55_3576 IPR003220 InsA N-terminal domain CH55_3576 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain CH55_3577 IPR005063 Transposase, IS1 CH55_3578 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CH55_3579 IPR002104 Integrase, catalytic CH55_3579 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_3579 IPR013762 Integrase-like, catalytic core CH55_358 IPR000600 ROK CH55_358 IPR036388 CH55_358 CH55_358 IPR036390 CH55_358 CH55_3581 IPR000310 Orn/Lys/Arg decarboxylase, major domain CH55_3581 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CH55_3581 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CH55_3581 IPR011006 CheY-like superfamily CH55_3581 IPR011193 Ornithine/lysine/arginine decarboxylase CH55_3581 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3581 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3581 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3581 IPR027464 Ornithine decarboxylase, N-terminal domain CH55_3581 IPR027568 Ornithine decarboxylase SpeF CH55_3581 IPR036633 CH55_3581 CH55_3582 IPR025997 Periplasmic binding protein domain CH55_3582 IPR028082 Periplasmic binding protein-like I CH55_3583 IPR003439 ABC transporter-like CH55_3583 IPR003593 AAA+ ATPase domain CH55_3583 IPR017871 ABC transporter, conserved site CH55_3583 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3584 IPR001851 ABC transporter, permease CH55_3585 IPR000531 TonB-dependent receptor, beta-barrel CH55_3585 IPR010105 TonB-dependent siderophore receptor CH55_3585 IPR012910 TonB-dependent receptor, plug CH55_3585 IPR036942 CH55_3585 CH55_3585 IPR037066 CH55_3585 CH55_3586 IPR002491 ABC transporter periplasmic binding domain CH55_3587 IPR000189 Prokaryotic transglycosylase, active site CH55_3587 IPR008258 Lytic transglycosylase-like SLT domain CH55_3587 IPR023346 Lysozyme-like domain CH55_3587 IPR023664 Murein transglycosylase-C CH55_3587 IPR024570 Murein transglycosylase-C, N-terminal CH55_3588 IPR007457 Fe(II) trafficking protein YggX CH55_3588 IPR036766 CH55_3588 CH55_3589 IPR000445 Helix-hairpin-helix motif CH55_3589 IPR003265 HhH-GPD domain CH55_3589 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CH55_3589 IPR004035 Endonuclease III, iron-sulphur binding site CH55_3589 IPR004036 Endonuclease III-like, conserved site-2 CH55_3589 IPR005760 A/G-specific adenine glycosylase MutY CH55_3589 IPR011257 DNA glycosylase CH55_3589 IPR015797 NUDIX hydrolase domain-like CH55_3589 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CH55_3589 IPR029119 MutY, C-terminal CH55_3590 IPR003358 tRNA (guanine-N-7) methyltransferase CH55_3590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3591 IPR007416 Protein of unknown function DUF469 CH55_3592 IPR012338 Beta-lactamase/transpeptidase-like CH55_3592 IPR015868 Glutaminase CH55_3593 IPR021307 Protein of unknown function DUF2884 CH55_3594 IPR021307 Protein of unknown function DUF2884 CH55_3595 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_3595 IPR020974 Peptidase C80, RTX cysteine protease domain CH55_3595 IPR038383 CH55_3595 CH55_3596 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related CH55_3596 IPR006638 Elongator protein 3/MiaB/NifB CH55_3596 IPR007197 Radical SAM CH55_3596 IPR010723 HemN, C-terminal domain CH55_3596 IPR023404 Radical SAM, alpha/beta horseshoe CH55_3597 IPR002637 Ham1-like protein CH55_3597 IPR020922 Non-canonical purine NTP pyrophosphatase CH55_3597 IPR029001 Inosine triphosphate pyrophosphatase-like CH55_3598 IPR003746 Protein of unknown function DUF167 CH55_3598 IPR005228 Conserved hypothetical protein CHP00251 CH55_3598 IPR036591 CH55_3598 CH55_3599 IPR003425 Uncharacterised protein family Ycf19 CH55_36 IPR003439 ABC transporter-like CH55_36 IPR003593 AAA+ ATPase domain CH55_36 IPR017871 ABC transporter, conserved site CH55_36 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_36 IPR030679 CH55_36 CH55_360 IPR004472 Dethiobiotin synthase BioD CH55_360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3600 IPR000304 Pyrroline-5-carboxylate reductase CH55_3600 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_3600 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CH55_3600 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CH55_3600 IPR036291 CH55_3600 CH55_3601 IPR001608 Alanine racemase, N-terminal CH55_3601 IPR011078 Uncharacterised protein family UPF0001 CH55_3601 IPR029066 PLP-binding barrel CH55_3602 IPR001482 Type II secretion system protein E CH55_3602 IPR003593 AAA+ ATPase domain CH55_3602 IPR006321 Pilus retraction protein PilT CH55_3602 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3603 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CH55_3603 IPR017754 Agmatine deiminase CH55_3604 IPR003010 Carbon-nitrogen hydrolase CH55_3604 IPR017755 N-carbamoylputrescine amidase CH55_3604 IPR036526 CH55_3604 CH55_3605 IPR005227 Resolvase, holliday junction-type, YqgF-like CH55_3605 IPR006641 YqgF/RNase H-like domain CH55_3605 IPR012337 Ribonuclease H-like domain CH55_3605 IPR037027 CH55_3605 CH55_3606 IPR003774 Protein of unknown function UPF0301 CH55_3607 IPR004215 Prokaryotic glutathione synthetase, N-terminal CH55_3607 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CH55_3607 IPR006284 Glutathione synthetase, prokaryotic CH55_3607 IPR013815 ATP-grasp fold, subdomain 1 CH55_3607 IPR016185 Pre-ATP-grasp domain CH55_3608 IPR006700 Ribosomal RNA small subunit methyltransferase E CH55_3608 IPR015947 PUA-like domain CH55_3608 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CH55_3608 IPR029028 Alpha/beta knot methyltransferases CH55_3609 IPR007346 Endonuclease I CH55_361 IPR001807 Chloride channel, voltage gated CH55_361 IPR014743 Chloride channel, core CH55_361 IPR023790 Chloride channel, voltage-gated, ClcB CH55_3610 IPR006640 Domain of unknown function SprT-like CH55_3610 IPR023483 Uncharacterised protein family SprT CH55_3610 IPR035240 CH55_3610 CH55_3611 IPR002133 S-adenosylmethionine synthetase CH55_3611 IPR022628 S-adenosylmethionine synthetase, N-terminal CH55_3611 IPR022629 S-adenosylmethionine synthetase, central domain CH55_3611 IPR022630 S-adenosylmethionine synthetase, C-terminal CH55_3611 IPR022631 S-adenosylmethionine synthetase, conserved site CH55_3611 IPR022636 S-adenosylmethionine synthetase superfamily CH55_3613 IPR000183 Ornithine/DAP/Arg decarboxylase CH55_3613 IPR002985 Arginine decarboxylase CH55_3613 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH55_3613 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CH55_3613 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CH55_3613 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CH55_3613 IPR029066 PLP-binding barrel CH55_3614 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CH55_3614 IPR036922 CH55_3614 CH55_3615 IPR001915 Peptidase M48 CH55_3616 IPR005474 Transketolase, N-terminal CH55_3616 IPR005475 Transketolase-like, pyrimidine-binding domain CH55_3616 IPR005478 Transketolase, bacterial-like CH55_3616 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CH55_3616 IPR020826 Transketolase binding site CH55_3616 IPR029061 Thiamin diphosphate-binding fold CH55_3616 IPR033248 CH55_3616 CH55_3617 IPR002686 Transposase IS200-like CH55_3617 IPR036515 CH55_3617 CH55_3618 IPR006422 D-erythrose-4-phosphate dehydrogenase CH55_3618 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CH55_3618 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CH55_3618 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CH55_3618 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CH55_3618 IPR036291 CH55_3618 CH55_3619 IPR001576 Phosphoglycerate kinase CH55_3619 IPR015824 Phosphoglycerate kinase, N-terminal CH55_3619 IPR015911 Phosphoglycerate kinase, conserved site CH55_3619 IPR036043 CH55_3619 CH55_362 IPR000843 Transcription regulator HTH, LacI CH55_362 IPR010982 Lambda repressor-like, DNA-binding domain CH55_362 IPR028082 Periplasmic binding protein-like I CH55_3620 IPR000771 Ketose-bisphosphate aldolase, class-II CH55_3620 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype CH55_3620 IPR013785 Aldolase-type TIM barrel CH55_3621 IPR006685 Mechanosensitive ion channel MscS CH55_3621 IPR006686 Mechanosensitive ion channel MscS, conserved site CH55_3621 IPR008910 Conserved TM helix CH55_3621 IPR010920 Like-Sm (LSM) domain CH55_3621 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CH55_3621 IPR011066 Mechanosensitive ion channel MscS, C-terminal CH55_3621 IPR023408 CH55_3621 CH55_3622 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CH55_3622 IPR004777 L-lysine exporter/arginine exporter CH55_3622 IPR023445 Arginine exporter protein ArgO, enterobacteria CH55_3623 IPR007497 Protein of unknown function DUF541 CH55_3624 IPR000847 Transcription regulator HTH, LysR CH55_3624 IPR005119 LysR, substrate-binding CH55_3624 IPR017685 Transcription regulator ArgP CH55_3624 IPR023490 Chromosome initiation inhibitor CH55_3624 IPR036388 CH55_3624 CH55_3624 IPR036390 CH55_3624 CH55_3625 IPR004788 Ribose 5-phosphate isomerase, type A CH55_3625 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CH55_3625 IPR037171 CH55_3625 CH55_3626 IPR002912 ACT domain CH55_3626 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH55_3626 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH55_3626 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH55_3626 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH55_3626 IPR036291 CH55_3626 CH55_3627 IPR002698 5-formyltetrahydrofolate cyclo-ligase CH55_3627 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CH55_3627 IPR037171 CH55_3627 CH55_3628 IPR007838 Cell division protein ZapA-like CH55_3628 IPR023771 Cell division protein ZapA, eubacteria CH55_3628 IPR036192 CH55_3628 CH55_3629 IPR011978 Uncharacterised protein family UPF0149 CH55_3629 IPR036255 CH55_3629 CH55_3630 IPR000994 Peptidase M24, structural domain CH55_3630 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CH55_3630 IPR001714 Peptidase M24, methionine aminopeptidase CH55_3630 IPR007865 Aminopeptidase P, N-terminal CH55_3630 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH55_3630 IPR036005 CH55_3630 CH55_3631 IPR002938 Monooxygenase, FAD-binding CH55_3631 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 CH55_3631 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CH55_3631 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CH55_3631 IPR036188 CH55_3631 CH55_3632 IPR002938 Monooxygenase, FAD-binding CH55_3632 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 CH55_3632 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CH55_3632 IPR036188 CH55_3632 CH55_3633 IPR006222 Glycine cleavage T-protein, N-terminal CH55_3633 IPR006223 Glycine cleavage system T protein CH55_3633 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CH55_3633 IPR022903 Glycine cleavage system T protein, bacteria CH55_3633 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CH55_3633 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA CH55_3633 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CH55_3634 IPR002930 Glycine cleavage system H-protein CH55_3634 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CH55_3634 IPR011053 Single hybrid motif CH55_3634 IPR017453 Glycine cleavage system H-protein, subgroup CH55_3634 IPR033753 CH55_3634 CH55_3635 IPR003437 Glycine cleavage system P protein, homodimeric CH55_3635 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3635 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3635 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3635 IPR020581 Glycine cleavage system P protein CH55_3636 IPR024311 Lipocalin-like domain CH55_3638 IPR005594 YadA-like, C-terminal CH55_3638 IPR008635 Coiled stalk of trimeric autotransporter adhesin CH55_3638 IPR008640 Head domain of trimeric autotransporter adhesin CH55_3638 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_364 IPR025997 Periplasmic binding protein domain CH55_364 IPR028082 Periplasmic binding protein-like I CH55_3640 IPR004254 Hly-III-related CH55_3640 IPR005744 HylII CH55_3641 IPR018681 Protein of unknown function DUF2165, transmembrane CH55_3642 IPR006222 Glycine cleavage T-protein, N-terminal CH55_3642 IPR017703 YgfZ/GcvT conserved site CH55_3642 IPR023758 tRNA-modifying protein YgfZ CH55_3642 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA CH55_3642 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CH55_3643 IPR005631 Flavinator of succinate dehydrogenase CH55_3643 IPR036714 CH55_3643 CH55_3644 IPR001789 Signal transduction response regulator, receiver domain CH55_3644 IPR001867 Signal transduction response regulator, C-terminal CH55_3644 IPR011006 CheY-like superfamily CH55_3644 IPR016032 Signal transduction response regulator, C-terminal effector CH55_3644 IPR036388 CH55_3644 CH55_3645 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_3645 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_3645 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_3645 IPR029150 Sensory domain of two-component sensor kinase CH55_3645 IPR029151 Periplasmic sensor domain-like CH55_3645 IPR036097 CH55_3645 CH55_3645 IPR036890 CH55_3645 CH55_3646 IPR010364 Uncharacterised protein family, inner membrane CreD CH55_3647 IPR001226 Flavodoxin, conserved site CH55_3647 IPR008254 Flavodoxin/nitric oxide synthase CH55_3647 IPR010086 Flavodoxin, long chain CH55_3647 IPR029039 Flavoprotein-like CH55_3648 IPR002104 Integrase, catalytic CH55_3648 IPR004107 Integrase, SAM-like, N-terminal CH55_3648 IPR010998 Integrase, Lambda-type, N-terminal CH55_3648 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_3648 IPR011932 Tyrosine recombinase XerD CH55_3648 IPR013762 Integrase-like, catalytic core CH55_3648 IPR023009 Tyrosine recombinase XerC/XerD CH55_3649 IPR009094 Disulphide bond isomerase, DsbC, N-terminal CH55_3649 IPR012336 Thioredoxin-like fold CH55_3649 IPR017937 Thioredoxin, conserved site CH55_3649 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CH55_3649 IPR036249 CH55_3649 CH55_3650 IPR001667 DDH domain CH55_3650 IPR003156 DHHA1 domain CH55_3650 IPR004610 Bacterial RecJ exonuclease CH55_3650 IPR038763 CH55_3650 CH55_3651 IPR000352 Peptide chain release factor class I/class II CH55_3651 IPR004374 Peptide chain release factor 2 CH55_3651 IPR005139 Peptide chain release factor CH55_3652 IPR002313 Lysine-tRNA ligase, class II CH55_3652 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH55_3652 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH55_3652 IPR012340 Nucleic acid-binding, OB-fold CH55_3652 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CH55_3652 IPR034762 CH55_3652 CH55_3654 IPR002104 Integrase, catalytic CH55_3654 IPR010998 Integrase, Lambda-type, N-terminal CH55_3654 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_3654 IPR013762 Integrase-like, catalytic core CH55_3654 IPR025166 Domain of unknown function DUF4102 CH55_3654 IPR038488 CH55_3654 CH55_3656 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH55_3656 IPR035093 CH55_3656 CH55_3657 IPR001387 Cro/C1-type helix-turn-helix domain CH55_3657 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3658 IPR031451 CH55_3658 CH55_3658 IPR038493 CH55_3658 CH55_3659 IPR001387 Cro/C1-type helix-turn-helix domain CH55_3659 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3659 IPR022452 Zinc finger/helix-turn-helix protein, YgiT CH55_3659 IPR022453 Zinc finger, YgiT-type CH55_3659 IPR032758 CH55_3659 CH55_366 IPR000515 MetI-like domain CH55_366 IPR035906 CH55_366 CH55_3660 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal CH55_3660 IPR006171 Toprim domain CH55_3660 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal CH55_3660 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CH55_3660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3660 IPR036388 CH55_3660 CH55_3660 IPR036390 CH55_3660 CH55_3661 IPR009241 Addiction module killer protein CH55_3662 IPR009061 DNA binding domain, putative CH55_3662 IPR010260 Bacteriophage P4, Orf88 CH55_3666 IPR003812 Fido domain CH55_3666 IPR036597 CH55_3666 CH55_3667 IPR008727 PAAR motif CH55_3667 IPR016128 Pyosin/cloacin translocation domain CH55_3667 IPR036302 CH55_3667 CH55_3668 IPR025983 Cysteine-rich CPCC domain CH55_367 IPR003439 ABC transporter-like CH55_367 IPR003593 AAA+ ATPase domain CH55_367 IPR017871 ABC transporter, conserved site CH55_367 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3670 IPR015287 Colicin D immunity protein domain CH55_3670 IPR036471 CH55_3670 CH55_3672 IPR021488 Protein of unknown function DUF3142 CH55_3674 IPR008727 PAAR motif CH55_3675 IPR024476 Protein of unknown function DUF3861 CH55_3676 IPR005149 Transcription regulator PadR N-terminal CH55_3676 IPR036388 CH55_3676 CH55_3676 IPR036390 CH55_3676 CH55_3677 IPR024453 CH55_3677 CH55_3677 IPR038765 CH55_3677 CH55_3679 IPR025997 Periplasmic binding protein domain CH55_3679 IPR028082 Periplasmic binding protein-like I CH55_368 IPR000845 Nucleoside phosphorylase domain CH55_368 IPR011271 AMP nucleosidase CH55_368 IPR018953 AMP nucleoside phosphorylase, N-terminal CH55_368 IPR035994 CH55_368 CH55_368 IPR037109 CH55_368 CH55_3680 IPR001851 ABC transporter, permease CH55_3681 IPR003439 ABC transporter-like CH55_3681 IPR003593 AAA+ ATPase domain CH55_3681 IPR017871 ABC transporter, conserved site CH55_3681 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3682 IPR003439 ABC transporter-like CH55_3682 IPR003593 AAA+ ATPase domain CH55_3682 IPR008995 Molybdate/tungstate binding, C-terminal CH55_3682 IPR013611 Transport-associated OB, type 2 CH55_3682 IPR017871 ABC transporter, conserved site CH55_3682 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3683 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_3683 IPR006060 Maltose binding protein CH55_3684 IPR000515 MetI-like domain CH55_3684 IPR035906 CH55_3684 CH55_3685 IPR000515 MetI-like domain CH55_3685 IPR035906 CH55_3685 CH55_3686 IPR011683 Glycosyl hydrolase family 53 CH55_3686 IPR017853 Glycoside hydrolase, superfamily CH55_3687 IPR011683 Glycosyl hydrolase family 53 CH55_3687 IPR017853 Glycoside hydrolase, superfamily CH55_3688 IPR003476 Glycoside hydrolase, family 42 CH55_3688 IPR013529 Glycoside hydrolase, family 42, N-terminal CH55_3688 IPR013738 Beta-galactosidase trimerisation CH55_3688 IPR013739 Beta-galactosidase C-terminal CH55_3688 IPR013780 Glycosyl hydrolase, family 13, all-beta CH55_3688 IPR017853 Glycoside hydrolase, superfamily CH55_3688 IPR029062 Class I glutamine amidotransferase-like CH55_3689 IPR001996 Phosphotransferase system, IIB component, type 1 CH55_3689 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CH55_3689 IPR036878 CH55_3689 CH55_3690 IPR003192 Porin, LamB type CH55_3690 IPR023738 Maltoporin CH55_3690 IPR036998 CH55_3690 CH55_3691 IPR000843 Transcription regulator HTH, LacI CH55_3691 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3691 IPR028082 Periplasmic binding protein-like I CH55_3692 IPR000322 Glycoside hydrolase, family 31 CH55_3692 IPR011013 Galactose mutarotase-like domain CH55_3692 IPR013780 Glycosyl hydrolase, family 13, all-beta CH55_3692 IPR017853 Glycoside hydrolase, superfamily CH55_3692 IPR025887 Glycoside hydrolase family 31, N-terminal domain CH55_3692 IPR033403 CH55_3692 CH55_3693 IPR011701 Major facilitator superfamily CH55_3693 IPR036259 CH55_3693 CH55_3694 IPR000843 Transcription regulator HTH, LacI CH55_3694 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3694 IPR028082 Periplasmic binding protein-like I CH55_3695 IPR002818 ThiJ/PfpI CH55_3695 IPR029062 Class I glutamine amidotransferase-like CH55_3697 IPR000771 Ketose-bisphosphate aldolase, class-II CH55_3697 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY CH55_3697 IPR013785 Aldolase-type TIM barrel CH55_3698 IPR016624 Uncharacterised conserved protein UCP014753 CH55_3699 IPR000917 Sulfatase CH55_3699 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_3699 IPR017850 Alkaline-phosphatase-like, core domain CH55_3699 IPR024607 Sulfatase, conserved site CH55_37 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_37 IPR010099 Sugar nucleotide epimerase YfcH,-like putative CH55_37 IPR013549 Domain of unknown function DUF1731 CH55_37 IPR036291 CH55_37 CH55_370 IPR009216 Virulence factor SrfB CH55_3700 IPR007197 Radical SAM CH55_3700 IPR013785 Aldolase-type TIM barrel CH55_3700 IPR023885 4Fe4S-binding SPASM domain CH55_3701 IPR008928 Six-hairpin glycosidase-like CH55_3701 IPR010905 Glycosyl hydrolase, family 88 CH55_3701 IPR012341 Six-hairpin glycosidase CH55_3702 IPR002347 Glucose/ribitol dehydrogenase CH55_3702 IPR036291 CH55_3702 CH55_3703 IPR002347 Glucose/ribitol dehydrogenase CH55_3703 IPR036291 CH55_3703 CH55_3704 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CH55_3704 IPR006680 Amidohydrolase 1 CH55_3704 IPR011059 Metal-dependent hydrolase, composite domain CH55_3704 IPR032466 CH55_3704 CH55_3705 IPR004701 Phosphotransferase system, mannose-type IIA component CH55_3705 IPR036662 CH55_3705 CH55_3706 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CH55_3707 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit CH55_3708 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CH55_3708 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CH55_3708 IPR036667 CH55_3708 CH55_3709 IPR001347 Sugar isomerase (SIS) CH55_3709 IPR014180 Sugar isomerase, AgaS CH55_371 IPR017030 Virulence effector, SrfC CH55_3710 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ CH55_3710 IPR013785 Aldolase-type TIM barrel CH55_3711 IPR001034 HTH DeoR N-terminal domain CH55_3711 IPR014036 DeoR C-terminal sensor domain CH55_3711 IPR036388 CH55_3711 CH55_3711 IPR036390 CH55_3711 CH55_3711 IPR037171 CH55_3711 CH55_3712 IPR000917 Sulfatase CH55_3712 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_3712 IPR017850 Alkaline-phosphatase-like, core domain CH55_3713 IPR002686 Transposase IS200-like CH55_3713 IPR036515 CH55_3713 CH55_3714 IPR001584 Integrase, catalytic core CH55_3714 IPR006120 Resolvase, HTH domain CH55_3714 IPR009057 Homeodomain-like CH55_3714 IPR012337 Ribonuclease H-like domain CH55_3715 IPR001270 ClpA/B family CH55_3715 IPR002611 IstB-like ATP-binding protein CH55_3715 IPR003593 AAA+ ATPase domain CH55_3715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3715 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_3716 IPR003159 Polysaccharide lyase family 8, central domain CH55_3716 IPR004103 Polysaccharide lyase family 8, C-terminal CH55_3716 IPR008929 Chondroitin AC/alginate lyase CH55_3716 IPR011013 Galactose mutarotase-like domain CH55_3716 IPR011071 Polysaccharide lyase family 8-like, C-terminal CH55_3716 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CH55_3716 IPR015177 Lyase, catalytic CH55_3717 IPR008929 Chondroitin AC/alginate lyase CH55_3717 IPR008979 Galactose-binding domain-like CH55_3717 IPR015176 Lyase, N-terminal CH55_3717 IPR015177 Lyase, catalytic CH55_3718 IPR005546 Autotransporter beta-domain CH55_3718 IPR006315 Outer membrane autotransporter barrel CH55_3718 IPR036709 CH55_3718 CH55_3719 IPR031605 CH55_3719 CH55_372 IPR017030 Virulence effector, SrfC CH55_3721 IPR001765 Carbonic anhydrase CH55_3721 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH55_3721 IPR036874 CH55_3721 CH55_3722 IPR016032 Signal transduction response regulator, C-terminal effector CH55_3722 IPR036388 CH55_3722 CH55_3723 IPR024961 CH55_3723 CH55_3724 IPR001775 GspD/PilQ family CH55_3724 IPR004845 Type II secretion system GspD, conserved site CH55_3724 IPR004846 Type II/III secretion system CH55_3724 IPR005644 NolW-like CH55_3724 IPR013356 Type II secretion system GspD CH55_3724 IPR038591 CH55_3724 CH55_3725 IPR001482 Type II secretion system protein E CH55_3725 IPR003593 AAA+ ATPase domain CH55_3725 IPR013369 Type II secretion system GspE CH55_3725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3725 IPR037257 CH55_3725 CH55_3727 IPR001992 Type II secretion system conserved site CH55_3727 IPR003004 GspF/PilC family CH55_3727 IPR018076 Type II secretion system F domain CH55_3728 IPR000983 Bacterial general secretion pathway protein G-type pilin CH55_3728 IPR010054 General secretion pathway protein G CH55_3728 IPR012902 Prokaryotic N-terminal methylation site CH55_3728 IPR013545 Type II secretion system protein G CH55_3729 IPR002416 Type II secretion system protein H CH55_3729 IPR012902 Prokaryotic N-terminal methylation site CH55_373 IPR010846 Protein of unknown function DUF1460 CH55_373 IPR038765 CH55_373 CH55_3730 IPR003413 Type II secretion system protein I domain CH55_3731 IPR010055 Type II secretion system protein J CH55_3731 IPR012902 Prokaryotic N-terminal methylation site CH55_3732 IPR005628 General secretion pathway protein K CH55_3732 IPR038072 CH55_3732 CH55_3733 IPR007812 Type II secretion system protein L CH55_3733 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CH55_3733 IPR025691 GspL periplasmic domain CH55_3735 IPR000045 Prepilin type IV endopeptidase, peptidase domain CH55_3735 IPR010627 Peptidase A24A, N-terminal CH55_3735 IPR014032 Peptidase A24A, prepilin type IV, bacterial CH55_3736 IPR019114 Chaperone lipoprotein, PulS/OutS-like CH55_3736 IPR038432 CH55_3736 CH55_3737 IPR001867 Signal transduction response regulator, C-terminal CH55_3737 IPR016032 Signal transduction response regulator, C-terminal effector CH55_3737 IPR036388 CH55_3737 CH55_3738 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding CH55_3738 IPR035440 CH55_3738 CH55_3739 IPR001853 DSBA-like thioredoxin domain CH55_3739 IPR036249 CH55_3739 CH55_374 IPR000399 TPP-binding enzyme, conserved site CH55_374 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH55_374 IPR012000 Thiamine pyrophosphate enzyme, central domain CH55_374 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH55_374 IPR012846 Acetolactate synthase, large subunit, biosynthetic CH55_374 IPR029035 DHS-like NAD/FAD-binding domain CH55_374 IPR029061 Thiamin diphosphate-binding fold CH55_3740 IPR003660 HAMP linker domain CH55_3740 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_3740 IPR004090 Chemotaxis methyl-accepting receptor CH55_3741 IPR001279 Beta-lactamase-like CH55_3741 IPR036866 CH55_3741 CH55_3742 IPR000847 Transcription regulator HTH, LysR CH55_3742 IPR005119 LysR, substrate-binding CH55_3742 IPR036388 CH55_3742 CH55_3742 IPR036390 CH55_3742 CH55_3743 IPR000847 Transcription regulator HTH, LysR CH55_3743 IPR005119 LysR, substrate-binding CH55_3743 IPR036388 CH55_3743 CH55_3743 IPR036390 CH55_3743 CH55_3744 IPR011701 Major facilitator superfamily CH55_3744 IPR036259 CH55_3744 CH55_3745 IPR000843 Transcription regulator HTH, LacI CH55_3745 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3745 IPR028082 Periplasmic binding protein-like I CH55_3746 IPR000183 Ornithine/DAP/Arg decarboxylase CH55_3746 IPR002986 Diaminopimelate decarboxylase, LysA CH55_3746 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CH55_3746 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CH55_3746 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CH55_3746 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CH55_3746 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CH55_3746 IPR029066 PLP-binding barrel CH55_3747 IPR006656 Molybdopterin oxidoreductase CH55_3747 IPR006657 Molydopterin dinucleotide-binding domain CH55_3747 IPR009010 Aspartate decarboxylase-like domain CH55_3749 IPR000873 AMP-dependent synthetase/ligase CH55_3749 IPR002123 Phospholipid/glycerol acyltransferase CH55_3749 IPR020845 AMP-binding, conserved site CH55_3749 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas CH55_3749 IPR025110 AMP-binding enzyme C-terminal domain CH55_3750 IPR011701 Major facilitator superfamily CH55_3750 IPR023727 Lysophospholipid transporter LplT CH55_3750 IPR036259 CH55_3750 CH55_3753 IPR023210 NADP-dependent oxidoreductase domain CH55_3753 IPR036812 CH55_3753 CH55_3754 IPR004230 DNA mismatch repair protein MutH CH55_3754 IPR011335 Restriction endonuclease type II-like CH55_3754 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II CH55_3754 IPR037057 CH55_3754 CH55_3755 IPR000086 NUDIX hydrolase domain CH55_3755 IPR015797 NUDIX hydrolase domain-like CH55_3755 IPR020084 NUDIX hydrolase, conserved site CH55_3755 IPR020476 NUDIX hydrolase CH55_3755 IPR022927 RNA pyrophosphohydrolase RppH CH55_3756 IPR003018 GAF domain CH55_3756 IPR008279 PEP-utilising enzyme, mobile domain CH55_3756 IPR008731 Phosphotransferase system, enzyme I N-terminal CH55_3756 IPR018274 PEP-utilising enzyme, active site CH55_3756 IPR029016 GAF domain-like CH55_3756 IPR036618 CH55_3756 CH55_3756 IPR036637 CH55_3756 CH55_3757 IPR000121 PEP-utilising enzyme, C-terminal CH55_3757 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_3757 IPR023151 PEP-utilising enzyme, conserved site CH55_3758 IPR001640 Prolipoprotein diacylglyceryl transferase CH55_3759 IPR000398 Thymidylate synthase CH55_3759 IPR020940 Thymidylate synthase, active site CH55_3759 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CH55_3759 IPR036926 CH55_3759 CH55_376 IPR006439 HAD hydrolase, subfamily IA CH55_376 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB CH55_376 IPR023198 Phosphoglycolate phosphatase, domain 2 CH55_376 IPR023214 HAD-like domain CH55_376 IPR036412 CH55_376 CH55_3761 IPR012902 Prokaryotic N-terminal methylation site CH55_3762 IPR012902 Prokaryotic N-terminal methylation site CH55_3762 IPR016419 Prepilin peptidase-dependent protein B, predicted CH55_3763 IPR019652 Protein of unknown function DUF2509 CH55_3764 IPR012902 Prokaryotic N-terminal methylation site CH55_3764 IPR022204 Prepilin peptidase dependent protein C CH55_3765 IPR006697 Exodeoxyribonuclease V, gamma subunit CH55_3765 IPR011335 Restriction endonuclease type II-like CH55_3765 IPR013986 DExx box DNA helicase domain CH55_3765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3766 IPR001431 Peptidase M16, zinc-binding site CH55_3766 IPR007863 Peptidase M16, C-terminal domain CH55_3766 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CH55_3766 IPR011765 Peptidase M16, N-terminal CH55_3766 IPR032632 CH55_3766 CH55_3767 IPR004586 Exodeoxyribonuclease V, beta subunit CH55_3767 IPR011335 Restriction endonuclease type II-like CH55_3767 IPR011604 Exonuclease, phage-type/RecB, C-terminal CH55_3767 IPR014017 DNA helicase, UvrD-like, C-terminal CH55_3767 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3767 IPR034739 CH55_3767 CH55_3768 IPR006344 Exodeoxyribonuclease V, alpha subunit CH55_3768 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3768 IPR027785 UvrD-like helicase C-terminal domain CH55_3769 IPR000182 GNAT domain CH55_3769 IPR001048 Aspartate/glutamate/uridylate kinase CH55_3769 IPR010167 Amino-acid N-acetyltransferase (ArgA) CH55_3769 IPR016181 Acyl-CoA N-acyltransferase CH55_3769 IPR036393 CH55_3769 CH55_377 IPR025266 TerB, N-terminal CH55_377 IPR028932 TerB-C domain CH55_377 IPR029024 TerB-like CH55_3770 IPR002508 Cell wall hydrolase/autolysin, catalytic CH55_3770 IPR021731 AMIN domain CH55_3773 IPR005300 Lytic transglycosylase MltA CH55_3773 IPR010611 3D domain CH55_3773 IPR026044 Membrane-bound lytic murein transglycosylase A CH55_3773 IPR036908 CH55_3773 CH55_3774 IPR000594 UBA/THIF-type NAD/FAD binding fold CH55_3774 IPR035985 CH55_3774 CH55_3775 IPR003808 Fe-S metabolism associated domain, SufE-like CH55_3775 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CH55_3776 IPR000192 Aminotransferase class V domain CH55_3776 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3776 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3776 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3776 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CH55_3776 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA CH55_3777 IPR010305 Protein of unknown function DUF903 CH55_3777 IPR010920 Like-Sm (LSM) domain CH55_3778 IPR000847 Transcription regulator HTH, LysR CH55_3778 IPR005119 LysR, substrate-binding CH55_3778 IPR036388 CH55_3778 CH55_3778 IPR036390 CH55_3778 CH55_3779 IPR006696 Protein of unknown function DUF423 CH55_378 IPR001952 Alkaline phosphatase CH55_378 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_378 IPR017850 Alkaline-phosphatase-like, core domain CH55_378 IPR018299 Alkaline phosphatase, active site CH55_3780 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CH55_3780 IPR011224 Ribosomal RNA large subunit methyltransferase M CH55_3780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3781 IPR002421 5'-3' exonuclease, N-terminal CH55_3781 IPR008918 Helix-hairpin-helix motif, class 2 CH55_3781 IPR020045 5'-3' exonuclease, C-terminal domain CH55_3781 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CH55_3781 IPR022895 Flap endonuclease Xni CH55_3781 IPR029060 PIN domain-like CH55_3781 IPR036279 CH55_3781 CH55_3782 IPR021826 Protein of unknown function DUF3412 CH55_3782 IPR027820 Domain of unknown function DUF4478 CH55_3782 IPR031100 CH55_3782 CH55_3782 IPR037153 CH55_3782 CH55_3783 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CH55_3783 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CH55_3783 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CH55_3784 IPR009948 Syd CH55_3784 IPR038228 CH55_3784 CH55_3785 IPR002686 Transposase IS200-like CH55_3785 IPR036515 CH55_3785 CH55_3786 IPR007384 Protein of unknown function UCP006257 CH55_3786 IPR023376 YqcC-like domain CH55_3786 IPR036814 CH55_3786 CH55_3787 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CH55_3787 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CH55_3787 IPR020103 Pseudouridine synthase, catalytic domain CH55_3788 IPR001094 Flavodoxin CH55_3788 IPR008254 Flavodoxin/nitric oxide synthase CH55_3788 IPR029039 Flavoprotein-like CH55_3789 IPR020911 Uncharacterised protein family UPF0325 CH55_379 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CH55_379 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CH55_379 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CH55_379 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CH55_379 IPR036217 CH55_379 CH55_379 IPR036388 CH55_379 CH55_379 IPR036631 CH55_379 CH55_3790 IPR002686 Transposase IS200-like CH55_3790 IPR036515 CH55_3790 CH55_3791 IPR001451 Bacterial transferase hexapeptide repeat CH55_3791 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CH55_3791 IPR011004 Trimeric LpxA-like CH55_3791 IPR018357 Hexapeptide transferase, conserved site CH55_3791 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CH55_3791 IPR037133 CH55_3791 CH55_3792 IPR002912 ACT domain CH55_3792 IPR002934 Nucleotidyl transferase domain CH55_3792 IPR003607 HD/PDEase domain CH55_3792 IPR006674 HD domain CH55_3792 IPR010043 Protein-PII uridylyltransferase CH55_3792 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CH55_3793 IPR000994 Peptidase M24, structural domain CH55_3793 IPR001714 Peptidase M24, methionine aminopeptidase CH55_3793 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CH55_3793 IPR036005 CH55_3793 CH55_3794 IPR001865 Ribosomal protein S2 CH55_3794 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CH55_3794 IPR018130 Ribosomal protein S2, conserved site CH55_3794 IPR023591 Ribosomal protein S2, flavodoxin-like domain CH55_3795 IPR001816 Translation elongation factor EFTs/EF1B CH55_3795 IPR009060 UBA-like CH55_3795 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CH55_3795 IPR018101 Translation elongation factor Ts, conserved site CH55_3795 IPR036402 CH55_3795 CH55_3796 IPR001048 Aspartate/glutamate/uridylate kinase CH55_3796 IPR011817 Uridylate kinase CH55_3796 IPR015963 Uridylate kinase, bacteria CH55_3796 IPR036393 CH55_3796 CH55_3797 IPR002661 Ribosome recycling factor CH55_3797 IPR023584 Ribosome recycling factor domain CH55_3797 IPR036191 CH55_3797 CH55_3798 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CH55_3798 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CH55_3798 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CH55_3798 IPR026877 DXP reductoisomerase C-terminal domain CH55_3798 IPR036169 CH55_3798 CH55_3798 IPR036291 CH55_3798 CH55_3799 IPR001441 Decaprenyl diphosphate synthase-like CH55_3799 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CH55_3799 IPR036424 CH55_3799 CH55_38 IPR001633 EAL domain CH55_38 IPR035919 CH55_38 CH55_380 IPR000595 Cyclic nucleotide-binding domain CH55_380 IPR012318 Helix-turn-helix motif, Crp-type CH55_380 IPR014710 RmlC-like jelly roll fold CH55_380 IPR018335 Transcription regulator HTH, Crp-type, conserved site CH55_380 IPR018490 Cyclic nucleotide-binding-like CH55_380 IPR036388 CH55_380 CH55_380 IPR036390 CH55_380 CH55_3800 IPR000374 Phosphatidate cytidylyltransferase CH55_3801 IPR001478 PDZ domain CH55_3801 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CH55_3801 IPR008915 Peptidase M50 CH55_3801 IPR036034 CH55_3801 CH55_3802 IPR000184 Bacterial surface antigen (D15) CH55_3802 IPR010827 Surface antigen variable number CH55_3802 IPR023707 Outer membrane protein assembly factor BamA CH55_3803 IPR005632 Chaperone protein Skp CH55_3803 IPR024930 Skp domain CH55_3804 IPR001451 Bacterial transferase hexapeptide repeat CH55_3804 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CH55_3804 IPR011004 Trimeric LpxA-like CH55_3804 IPR018357 Hexapeptide transferase, conserved site CH55_3804 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CH55_3805 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CH55_3805 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CH55_3805 IPR029069 HotDog domain CH55_3806 IPR001451 Bacterial transferase hexapeptide repeat CH55_3806 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CH55_3806 IPR011004 Trimeric LpxA-like CH55_3806 IPR018357 Hexapeptide transferase, conserved site CH55_3806 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal CH55_3806 IPR037157 CH55_3806 CH55_3807 IPR003835 Glycosyl transferase, family 19 CH55_3808 IPR012337 Ribonuclease H-like domain CH55_3808 IPR022898 Ribonuclease HII CH55_3808 IPR024567 Ribonuclease HII/HIII domain CH55_3808 IPR036397 CH55_3808 CH55_3809 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH55_3809 IPR004013 PHP, C-terminal CH55_3809 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH55_3809 IPR004805 DNA polymerase III, alpha subunit CH55_3809 IPR011708 Bacterial DNA polymerase III, alpha subunit CH55_3809 IPR016195 Polymerase/histidinol phosphatase-like CH55_3809 IPR029460 DNA polymerase, helix-hairpin-helix motif CH55_381 IPR006016 UspA CH55_3810 IPR001095 Acetyl-CoA carboxylase, alpha subunit CH55_3810 IPR029045 ClpP/crotonase-like domain CH55_3811 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH55_3811 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH55_3812 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CH55_3812 IPR012094 Lysidine-tRNA(Ile) synthetase CH55_3812 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal CH55_3812 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CH55_3812 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_3812 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain CH55_3813 IPR008168 Cytochrome c, class IC CH55_3813 IPR009056 Cytochrome c-like domain CH55_3813 IPR036909 CH55_3813 CH55_3814 IPR009778 Modulator of Rho-dependent transcription termination CH55_3814 IPR023534 Rof/RNase P-like CH55_3814 IPR038626 CH55_3814 CH55_3815 IPR009624 Uncharacterised protein family UPF0253 CH55_3816 IPR009822 YaeQ CH55_3816 IPR011335 Restriction endonuclease type II-like CH55_3816 IPR038590 CH55_3816 CH55_3817 IPR000352 Peptide chain release factor class I/class II CH55_3818 IPR007298 Copper resistance lipoprotein NlpE CH55_3818 IPR033450 CH55_3818 CH55_3818 IPR038139 CH55_3818 CH55_3819 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CH55_3819 IPR002316 Proline-tRNA ligase, class IIa CH55_3819 IPR004154 Anticodon-binding CH55_3819 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CH55_3819 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CH55_3819 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CH55_3819 IPR036621 CH55_3819 CH55_3819 IPR036754 CH55_3819 CH55_382 IPR012136 NADP transhydrogenase, beta subunit CH55_382 IPR029035 DHS-like NAD/FAD-binding domain CH55_382 IPR034300 CH55_382 CH55_3820 IPR023368 Uncharacterised protein family UPF0066, conserved site CH55_3820 IPR023370 TsaA-like domain CH55_3820 IPR036413 CH55_3820 CH55_3820 IPR036414 CH55_3820 CH55_3821 IPR030852 CH55_3821 CH55_3822 IPR004872 Lipoprotein NlpA family CH55_3823 IPR000515 MetI-like domain CH55_3823 IPR035906 CH55_3823 CH55_3824 IPR003439 ABC transporter-like CH55_3824 IPR003593 AAA+ ATPase domain CH55_3824 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria CH55_3824 IPR017871 ABC transporter, conserved site CH55_3824 IPR018449 NIL domain CH55_3824 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3825 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CH55_3825 IPR006543 Histidinol-phosphate phosphatase CH55_3825 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CH55_3825 IPR023214 HAD-like domain CH55_3825 IPR036412 CH55_3825 CH55_383 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CH55_383 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CH55_383 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CH55_383 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CH55_383 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CH55_383 IPR026255 NAD(P) transhydrogenase, alpha subunit CH55_383 IPR036291 CH55_383 CH55_3831 IPR018170 Aldo/keto reductase, conserved site CH55_3831 IPR020471 Aldo/keto reductase subgroup CH55_3831 IPR023210 NADP-dependent oxidoreductase domain CH55_3831 IPR036812 CH55_3831 CH55_3833 IPR005135 Endonuclease/exonuclease/phosphatase CH55_3833 IPR036691 CH55_3833 CH55_3834 IPR000189 Prokaryotic transglycosylase, active site CH55_3834 IPR008258 Lytic transglycosylase-like SLT domain CH55_3834 IPR018392 LysM domain CH55_3834 IPR023346 Lysozyme-like domain CH55_3834 IPR036779 CH55_3834 CH55_3835 IPR001279 Beta-lactamase-like CH55_3835 IPR017782 Hydroxyacylglutathione hydrolase CH55_3835 IPR032282 CH55_3835 CH55_3835 IPR036866 CH55_3835 CH55_3836 IPR013216 Methyltransferase type 11 CH55_3836 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3837 IPR002156 Ribonuclease H domain CH55_3837 IPR012337 Ribonuclease H-like domain CH55_3837 IPR022892 Ribonuclease H CH55_3837 IPR036397 CH55_3837 CH55_3838 IPR006054 DNA polymerase III, epsilon subunit CH55_3838 IPR006309 DNA polymerase 3, epsilon subunit CH55_3838 IPR012337 Ribonuclease H-like domain CH55_3838 IPR013520 Exonuclease, RNase T/DNA polymerase III CH55_3838 IPR036397 CH55_3838 CH55_384 IPR010854 Domain of unknown function DUF1471 CH55_384 IPR025539 YdgH protein CH55_384 IPR025543 Dodecin-like CH55_384 IPR036275 CH55_384 CH55_3840 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin CH55_3840 IPR038271 CH55_3840 CH55_3842 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_3843 IPR001270 ClpA/B family CH55_3843 IPR002611 IstB-like ATP-binding protein CH55_3843 IPR003593 AAA+ ATPase domain CH55_3843 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3843 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_3844 IPR001584 Integrase, catalytic core CH55_3844 IPR006120 Resolvase, HTH domain CH55_3844 IPR009057 Homeodomain-like CH55_3844 IPR012337 Ribonuclease H-like domain CH55_3845 IPR038488 CH55_3845 CH55_3846 IPR009241 Addiction module killer protein CH55_3846 IPR014056 Addiction module killer protein, predicted CH55_3847 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3847 IPR014057 Addiction module antidote protein, HI1420 CH55_3849 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_385 IPR002293 Amino acid/polyamine transporter I CH55_385 IPR004754 Amino acid antiporter CH55_3850 IPR006171 Toprim domain CH55_3850 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal CH55_3851 IPR018880 Bacteriophage P4, Ash protein CH55_3852 IPR010260 Bacteriophage P4, Orf88 CH55_3853 IPR010998 Integrase, Lambda-type, N-terminal CH55_3853 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_3853 IPR013762 Integrase-like, catalytic core CH55_3853 IPR024456 Integrase catalytic domain, putative CH55_3853 IPR024457 Putative integrase, N-terminal CH55_3855 IPR025382 Domain of unknown function DUF4297 CH55_3856 IPR002104 Integrase, catalytic CH55_3856 IPR010998 Integrase, Lambda-type, N-terminal CH55_3856 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_3856 IPR013762 Integrase-like, catalytic core CH55_3856 IPR025166 Domain of unknown function DUF4102 CH55_3856 IPR038488 CH55_3856 CH55_3857 IPR002686 Transposase IS200-like CH55_3857 IPR036515 CH55_3857 CH55_3858 IPR000037 SsrA-binding protein CH55_3858 IPR020081 SsrA-binding protein, conserved site CH55_3858 IPR023620 Small protein B CH55_3859 IPR005031 Streptomyces cyclase/dehydrase CH55_3859 IPR023393 START-like domain CH55_3860 IPR005346 RnfH protein CH55_3860 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH55_3860 IPR037021 CH55_3860 CH55_3861 IPR007450 Lipoprotein SmpA/OmlA CH55_3861 IPR026592 Outer membrane protein assembly factor BamE CH55_3861 IPR037873 CH55_3861 CH55_3862 IPR003395 RecF/RecN/SMC, N-terminal CH55_3862 IPR004604 DNA recombination/repair protein RecN CH55_3862 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3863 IPR002504 Inorganic polyphosphate/ATP-NAD kinase CH55_3863 IPR016064 ATP-NAD kinase-like domain CH55_3863 IPR017437 ATP-NAD kinase, PpnK-type, all-beta CH55_3863 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CH55_3864 IPR000740 GrpE nucleotide exchange factor CH55_3864 IPR009012 GrpE nucleotide exchange factor, head CH55_3864 IPR013805 GrpE nucleotide exchange factor, coiled-coil CH55_3865 IPR002020 Citrate synthase-like CH55_3865 IPR010953 Citrate synthase, type I CH55_3865 IPR016142 Citrate synthase-like, large alpha subdomain CH55_3865 IPR016143 Citrate synthase-like, small alpha subdomain CH55_3865 IPR019810 Citrate synthase active site CH55_3865 IPR024176 Citrate synthase, bacterial-type CH55_3865 IPR036969 CH55_3865 CH55_3866 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit CH55_3866 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CH55_3866 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CH55_3866 IPR034804 CH55_3866 CH55_3867 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CH55_3867 IPR034804 CH55_3867 CH55_3868 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CH55_3868 IPR003953 FAD binding domain CH55_3868 IPR011281 Succinate dehydrogenase, flavoprotein subunit CH55_3868 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CH55_3868 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CH55_3868 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CH55_3868 IPR036188 CH55_3868 CH55_3868 IPR037099 CH55_3868 CH55_3869 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CH55_3869 IPR009051 Alpha-helical ferredoxin CH55_3869 IPR012675 Beta-grasp domain CH55_3869 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_3869 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CH55_3869 IPR036010 CH55_3869 CH55_387 IPR001789 Signal transduction response regulator, receiver domain CH55_387 IPR001867 Signal transduction response regulator, C-terminal CH55_387 IPR011006 CheY-like superfamily CH55_387 IPR016032 Signal transduction response regulator, C-terminal effector CH55_387 IPR036388 CH55_387 CH55_3870 IPR001017 Dehydrogenase, E1 component CH55_3870 IPR005475 Transketolase-like, pyrimidine-binding domain CH55_3870 IPR011603 2-oxoglutarate dehydrogenase E1 component CH55_3870 IPR029061 Thiamin diphosphate-binding fold CH55_3870 IPR031717 CH55_3870 CH55_3870 IPR032106 CH55_3870 CH55_3871 IPR000089 Biotin/lipoyl attachment CH55_3871 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CH55_3871 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CH55_3871 IPR004167 E3 binding CH55_3871 IPR006255 Dihydrolipoamide succinyltransferase CH55_3871 IPR011053 Single hybrid motif CH55_3871 IPR023213 Chloramphenicol acetyltransferase-like domain CH55_3871 IPR036625 CH55_3871 CH55_3872 IPR005809 Succinyl-CoA synthetase, beta subunit CH55_3872 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CH55_3872 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CH55_3872 IPR013815 ATP-grasp fold, subdomain 1 CH55_3872 IPR016102 Succinyl-CoA synthetase-like CH55_3872 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CH55_3873 IPR003781 CoA-binding CH55_3873 IPR005810 Succinyl-CoA ligase, alpha subunit CH55_3873 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CH55_3873 IPR016102 Succinyl-CoA synthetase-like CH55_3873 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CH55_3873 IPR033847 CH55_3873 CH55_3873 IPR036291 CH55_3873 CH55_3874 IPR002585 Cytochrome d ubiquinol oxidase, subunit I CH55_3875 IPR003317 Cytochrome d ubiquinol oxidase, subunit II CH55_3876 IPR011724 Cyd operon protein YbgT CH55_3876 IPR012994 Membrane bound YbgT-like CH55_3877 IPR011846 Cyd operon protein YbgE CH55_3878 IPR006683 Thioesterase superfamily CH55_3878 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CH55_3878 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CH55_3878 IPR029069 HotDog domain CH55_3879 IPR002898 MotA/TolQ/ExbB proton channel CH55_3879 IPR014163 Tol-Pal system, TolQ CH55_388 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_388 IPR003660 HAMP linker domain CH55_388 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_388 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_388 IPR036097 CH55_388 CH55_388 IPR036890 CH55_388 CH55_3880 IPR003400 Biopolymer transport protein ExbD/TolR CH55_3880 IPR014168 Biopolymer transport, TolR CH55_3881 IPR014161 Tol-Pal system, TolA CH55_3882 IPR007195 TolB, N-terminal CH55_3882 IPR011042 Six-bladed beta-propeller, TolB-like CH55_3882 IPR011659 WD40-like Beta Propeller CH55_3882 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB CH55_3882 IPR036752 CH55_3882 CH55_3883 IPR006664 Outer membrane protein, bacterial CH55_3883 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_3883 IPR006690 Outer membrane protein, OmpA-like, conserved site CH55_3883 IPR014169 Peptidoglycan-associated lipoprotein CH55_3883 IPR036737 CH55_3883 CH55_3883 IPR039001 CH55_3883 CH55_3884 IPR011990 Tetratricopeptide-like helical domain CH55_3884 IPR014162 Tol-Pal system, YbgF CH55_3884 IPR019734 Tetratricopeptide repeat CH55_3884 IPR032519 CH55_3884 CH55_3884 IPR034706 CH55_3884 CH55_3888 IPR003473 Quinolinate synthetase A CH55_3888 IPR023513 Quinolinate synthase A, type 1 CH55_3888 IPR036094 CH55_3888 CH55_3889 IPR006419 Nicotinamide mononucleotide transporter PnuC CH55_389 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase CH55_3890 IPR002524 Cation efflux protein CH55_3890 IPR023500 Zinc transporter ZitB CH55_3890 IPR027469 Cation efflux protein transmembrane domain CH55_3890 IPR036837 CH55_3890 CH55_3892 IPR006218 DAHP synthetase I/KDSA CH55_3892 IPR006219 DHAP synthase, class 1 CH55_3892 IPR013785 Aldolase-type TIM barrel CH55_3893 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CH55_3893 IPR005952 Phosphoglycerate mutase 1 CH55_3893 IPR013078 Histidine phosphatase superfamily, clade-1 CH55_3893 IPR029033 Histidine phosphatase superfamily CH55_3894 IPR011690 Phosphate-starvation-induced PsiF repeat CH55_3895 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CH55_3895 IPR011013 Galactose mutarotase-like domain CH55_3895 IPR013458 Aldose 1-epimerase, bacterial CH55_3895 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CH55_3895 IPR015443 Aldose 1-epimerase CH55_3895 IPR018052 Aldose 1-epimerase, conserved site CH55_3897 IPR000705 Galactokinase CH55_3897 IPR006203 GHMP kinase, ATP-binding, conserved site CH55_3897 IPR006204 GHMP kinase N-terminal domain CH55_3897 IPR006206 Mevalonate/galactokinase CH55_3897 IPR013750 GHMP kinase, C-terminal domain CH55_3897 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_3897 IPR019539 Galactokinase galactose-binding domain CH55_3897 IPR019741 Galactokinase, conserved site CH55_3897 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_3897 IPR022963 Galactokinase, bacterial CH55_3897 IPR036554 CH55_3897 CH55_3898 IPR001937 Galactose-1-phosphate uridyl transferase, class I CH55_3898 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal CH55_3898 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal CH55_3898 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site CH55_3898 IPR036265 CH55_3898 CH55_3899 IPR005886 UDP-glucose 4-epimerase GalE CH55_3899 IPR016040 NAD(P)-binding domain CH55_3899 IPR036291 CH55_3899 CH55_39 IPR000979 Phosphodiesterase MJ0936/Vps29 CH55_39 IPR020935 Phosphodiesterase YfcE, conserved site CH55_39 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CH55_39 IPR029052 Metallo-dependent phosphatase-like CH55_390 IPR002686 Transposase IS200-like CH55_390 IPR036515 CH55_390 CH55_3900 IPR003675 CAAX amino terminal protease CH55_3902 IPR003439 ABC transporter-like CH55_3902 IPR003593 AAA+ ATPase domain CH55_3902 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3903 IPR000847 Transcription regulator HTH, LysR CH55_3903 IPR003725 Molybdenum-binding protein, N-terminal CH55_3903 IPR004606 Molybdenum-pterin binding CH55_3903 IPR005116 Transport-associated OB, type 1 CH55_3903 IPR008995 Molybdate/tungstate binding, C-terminal CH55_3903 IPR016462 Molybdate-dependent transcriptional regulator, ModE CH55_3903 IPR036388 CH55_3903 CH55_3903 IPR036390 CH55_3903 CH55_3904 IPR019702 Protein of unknown function DUF2592 CH55_3905 IPR005950 Molybdenum ABC transporter, periplasmic binding protein CH55_3906 IPR000515 MetI-like domain CH55_3906 IPR011867 Molybdate ABC transporter, permease protein CH55_3906 IPR035906 CH55_3906 CH55_3907 IPR003439 ABC transporter-like CH55_3907 IPR003593 AAA+ ATPase domain CH55_3907 IPR004606 Molybdenum-pterin binding CH55_3907 IPR005116 Transport-associated OB, type 1 CH55_3907 IPR008995 Molybdate/tungstate binding, C-terminal CH55_3907 IPR011868 Molybdate ABC transporter, ATP-binding protein CH55_3907 IPR017871 ABC transporter, conserved site CH55_3907 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3908 IPR000150 Cof protein CH55_3908 IPR006379 HAD-superfamily hydrolase, subfamily IIB CH55_3908 IPR023214 HAD-like domain CH55_3908 IPR036412 CH55_3908 CH55_3909 IPR011045 Nitrous oxide reductase, N-terminal CH55_3909 IPR015943 WD40/YVTN repeat-like-containing domain CH55_3909 IPR019405 Lactonase, 7-bladed beta propeller CH55_3909 IPR022528 6-phosphogluconolactonase, YbhE-type CH55_391 IPR005165 Anthrax toxin, edema factor, central CH55_391 IPR022385 Rhs repeat-associated core CH55_391 IPR035099 CH55_391 CH55_391 IPR037017 CH55_391 CH55_3910 IPR005814 Aminotransferase class-III CH55_3910 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CH55_3910 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3910 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3910 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3911 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CH55_3911 IPR006638 Elongator protein 3/MiaB/NifB CH55_3911 IPR007197 Radical SAM CH55_3911 IPR010722 Biotin and thiamin synthesis-associated domain CH55_3911 IPR013785 Aldolase-type TIM barrel CH55_3911 IPR024177 Biotin synthase CH55_3912 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CH55_3912 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CH55_3912 IPR004839 Aminotransferase, class I/classII CH55_3912 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3912 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3912 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3912 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CH55_3913 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CH55_3913 IPR013216 Methyltransferase type 11 CH55_3913 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_3914 IPR004472 Dethiobiotin synthase BioD CH55_3914 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3915 IPR003439 ABC transporter-like CH55_3915 IPR003593 AAA+ ATPase domain CH55_3915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3916 IPR001650 Helicase, C-terminal CH55_3916 IPR001943 UVR domain CH55_3916 IPR004807 UvrABC system, subunit B CH55_3916 IPR006935 Helicase/UvrB domain CH55_3916 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_3916 IPR024759 UvrB, YAD/RRR-motif-containing domain CH55_3916 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3916 IPR036876 CH55_3916 CH55_3917 IPR018668 Protein of unknown function DUF2132 CH55_3917 IPR036361 CH55_3917 CH55_3918 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CH55_3918 IPR010119 Gluconeogenesis factor CH55_3918 IPR038136 CH55_3918 CH55_392 IPR035099 CH55_392 CH55_3920 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CH55_3920 IPR006638 Elongator protein 3/MiaB/NifB CH55_3920 IPR007197 Radical SAM CH55_3920 IPR010505 Molybdenum cofactor synthesis C-terminal CH55_3920 IPR013483 Molybdenum cofactor biosynthesis protein A CH55_3920 IPR013785 Aldolase-type TIM barrel CH55_3921 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CH55_3921 IPR023045 Molybdenum cofactor biosynthesis C CH55_3921 IPR036522 CH55_3921 CH55_3922 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CH55_3922 IPR012675 Beta-grasp domain CH55_3922 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CH55_3923 IPR003448 Molybdopterin biosynthesis MoaE CH55_3923 IPR036563 CH55_3923 CH55_3924 IPR006214 Bax inhibitor 1-related CH55_3925 IPR002686 Transposase IS200-like CH55_3925 IPR036515 CH55_3925 CH55_3926 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CH55_3926 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CH55_3926 IPR011533 Oxygen-dependent choline dehydrogenase CH55_3926 IPR012132 Glucose-methanol-choline oxidoreductase CH55_3926 IPR027424 Glucose Oxidase, domain 2 CH55_3926 IPR036188 CH55_3926 CH55_3927 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase CH55_3927 IPR015590 Aldehyde dehydrogenase domain CH55_3927 IPR016160 Aldehyde dehydrogenase, cysteine active site CH55_3927 IPR016161 Aldehyde/histidinol dehydrogenase CH55_3927 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_3927 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_3927 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CH55_3928 IPR001647 DNA-binding HTH domain, TetR-type CH55_3928 IPR009057 Homeodomain-like CH55_3928 IPR017757 Transcriptional repressor BetI CH55_3928 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH55_3928 IPR036271 CH55_3928 CH55_3928 IPR039538 CH55_3928 CH55_3929 IPR000060 BCCT transporter family CH55_3929 IPR018093 BCCT transporter, conserved site CH55_393 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CH55_393 IPR016174 Di-haem cytochrome, transmembrane CH55_3930 IPR000847 Transcription regulator HTH, LysR CH55_3930 IPR005119 LysR, substrate-binding CH55_3930 IPR036388 CH55_3930 CH55_3930 IPR036390 CH55_3930 CH55_3931 IPR000620 Drug/metabolite transporter CH55_3932 IPR000845 Nucleoside phosphorylase domain CH55_3932 IPR010943 Xanthosine phosphorylase CH55_3932 IPR011268 Purine nucleoside phosphorylase CH55_3932 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific CH55_3932 IPR035994 CH55_3932 CH55_3933 IPR004740 Nucleoside:H+ symporter CH55_3933 IPR036259 CH55_3933 CH55_3934 IPR002686 Transposase IS200-like CH55_3934 IPR036515 CH55_3934 CH55_3935 IPR004740 Nucleoside:H+ symporter CH55_3935 IPR036259 CH55_3935 CH55_3936 IPR020365 Zinc resistance-associated protein, ZraP CH55_3936 IPR025961 Heavy-metal resistance protein CH55_3937 IPR000014 PAS domain CH55_3937 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_3937 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_3937 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_3937 IPR013767 PAS fold CH55_3937 IPR029151 Periplasmic sensor domain-like CH55_3937 IPR033463 CH55_3937 CH55_3937 IPR035965 CH55_3937 CH55_3937 IPR036097 CH55_3937 CH55_3937 IPR036890 CH55_3937 CH55_3938 IPR001789 Signal transduction response regulator, receiver domain CH55_3938 IPR002078 RNA polymerase sigma factor 54 interaction domain CH55_3938 IPR002197 DNA binding HTH domain, Fis-type CH55_3938 IPR003593 AAA+ ATPase domain CH55_3938 IPR009057 Homeodomain-like CH55_3938 IPR011006 CheY-like superfamily CH55_3938 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH55_3938 IPR025944 Sigma-54 interaction domain, conserved site CH55_3938 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3939 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CH55_3939 IPR013785 Aldolase-type TIM barrel CH55_3940 IPR000847 Transcription regulator HTH, LysR CH55_3940 IPR005119 LysR, substrate-binding CH55_3940 IPR036388 CH55_3940 CH55_3940 IPR036390 CH55_3940 CH55_3941 IPR009799 EthD domain CH55_3941 IPR011008 Dimeric alpha-beta barrel CH55_3942 IPR000412 ABC-2 transporter CH55_3944 IPR003439 ABC transporter-like CH55_3944 IPR003593 AAA+ ATPase domain CH55_3944 IPR017871 ABC transporter, conserved site CH55_3944 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3945 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CH55_3945 IPR032317 CH55_3945 CH55_3946 IPR001647 DNA-binding HTH domain, TetR-type CH55_3946 IPR009057 Homeodomain-like CH55_3946 IPR015292 Transcription regulator YbiH, C-terminal CH55_3946 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CH55_3946 IPR036271 CH55_3946 CH55_3947 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CH55_3947 IPR001650 Helicase, C-terminal CH55_3947 IPR011545 DEAD/DEAH box helicase domain CH55_3947 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_3947 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3947 IPR028622 ATP-dependent RNA helicase RhlE CH55_3949 IPR038717 CH55_3949 CH55_395 IPR001254 Peptidase S1 CH55_395 IPR001314 Peptidase S1A, chymotrypsin-type CH55_395 IPR009003 Trypsin-like cysteine/serine peptidase domain CH55_395 IPR018114 Peptidase S1, trypsin family, active site CH55_395 IPR033116 CH55_395 CH55_3954 IPR001207 Transposase, mutator type CH55_3955 IPR001207 Transposase, mutator type CH55_3956 IPR001207 Transposase, mutator type CH55_3958 IPR010351 Protein of unknown function DUF943 CH55_3959 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CH55_3959 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CH55_3959 IPR029056 Ribokinase-like CH55_396 IPR001387 Cro/C1-type helix-turn-helix domain CH55_396 IPR010982 Lambda repressor-like, DNA-binding domain CH55_3963 IPR014453 Inhibitor of vertebrate lysozyme CH55_3963 IPR036501 CH55_3963 CH55_3964 IPR001206 Diacylglycerol kinase, catalytic domain CH55_3964 IPR005218 Diacylglycerol/lipid kinase CH55_3964 IPR016064 ATP-NAD kinase-like domain CH55_3964 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CH55_3964 IPR022433 Lipid kinase YegS CH55_3965 IPR001539 Peptidase U32 CH55_3965 IPR032525 CH55_3965 CH55_3966 IPR010879 Domain of unknown function DUF1508 CH55_3966 IPR036913 CH55_3966 CH55_3967 IPR001789 Signal transduction response regulator, receiver domain CH55_3967 IPR001867 Signal transduction response regulator, C-terminal CH55_3967 IPR011006 CheY-like superfamily CH55_3967 IPR036388 CH55_3967 CH55_3968 IPR003660 HAMP linker domain CH55_3968 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_3968 IPR036097 CH55_3968 CH55_3968 IPR036890 CH55_3968 CH55_3969 IPR004638 Drug resistance transporter EmrB/QacA subfamily CH55_3969 IPR011701 Major facilitator superfamily CH55_3969 IPR023721 Multidrug resistance protein MdtD, putative CH55_3969 IPR036259 CH55_3969 CH55_397 IPR009241 Addiction module killer protein CH55_3970 IPR001036 Acriflavin resistance protein CH55_3970 IPR023931 Multidrug resistance protein MdtC CH55_3970 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_3971 IPR001036 Acriflavin resistance protein CH55_3971 IPR022831 Multidrug resistance protein MdtB CH55_3971 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_3972 IPR006143 RND efflux pump, membrane fusion protein CH55_3972 IPR022824 Multidrug resistance protein MdtA CH55_3972 IPR039562 CH55_3972 CH55_3973 IPR003439 ABC transporter-like CH55_3973 IPR003593 AAA+ ATPase domain CH55_3973 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CH55_3973 IPR008995 Molybdate/tungstate binding, C-terminal CH55_3973 IPR013611 Transport-associated OB, type 2 CH55_3973 IPR017871 ABC transporter, conserved site CH55_3973 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3974 IPR000524 Transcription regulator HTH, GntR CH55_3974 IPR004839 Aminotransferase, class I/classII CH55_3974 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3974 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3974 IPR036388 CH55_3974 CH55_3974 IPR036390 CH55_3974 CH55_3975 IPR004632 4-aminobutyrate aminotransferase, bacterial CH55_3975 IPR005814 Aminotransferase class-III CH55_3975 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_3975 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_3975 IPR015424 Pyridoxal phosphate-dependent transferase CH55_3976 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_3977 IPR000515 MetI-like domain CH55_3977 IPR035906 CH55_3977 CH55_3978 IPR000515 MetI-like domain CH55_3978 IPR035906 CH55_3978 CH55_3979 IPR013126 Heat shock protein 70 family CH55_3979 IPR018181 Heat shock protein 70, conserved site CH55_398 IPR001650 Helicase, C-terminal CH55_398 IPR003593 AAA+ ATPase domain CH55_398 IPR007502 Helicase-associated domain CH55_398 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type CH55_398 IPR011545 DEAD/DEAH box helicase domain CH55_398 IPR011709 Domain of unknown function DUF1605 CH55_398 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_398 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal CH55_398 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3980 IPR006667 SLC41 divalent cation transporters, integral membrane domain CH55_3980 IPR036739 CH55_3980 CH55_3980 IPR038048 CH55_3980 CH55_3981 IPR000644 CBS domain CH55_3981 IPR006668 Magnesium transporter, MgtE intracellular domain CH55_3981 IPR038076 CH55_3981 CH55_3982 IPR003695 Ppx/GppA phosphatase CH55_3982 IPR022371 Exopolyphosphatase CH55_3982 IPR030673 CH55_3982 CH55_3983 IPR003414 Polyphosphate kinase CH55_3983 IPR024953 Polyphosphate kinase middle domain CH55_3983 IPR025198 Polyphosphate kinase N-terminal domain CH55_3983 IPR025200 Polyphosphate kinase C-terminal domain CH55_3983 IPR036830 CH55_3983 CH55_3983 IPR036832 CH55_3983 CH55_3984 IPR035906 CH55_3984 CH55_3986 IPR000515 MetI-like domain CH55_3986 IPR005672 Phosphate transport system permease protein PstA CH55_3986 IPR035906 CH55_3986 CH55_3987 IPR003439 ABC transporter-like CH55_3987 IPR003593 AAA+ ATPase domain CH55_3987 IPR005670 Phosphate transport system permease protein 1 CH55_3987 IPR017871 ABC transporter, conserved site CH55_3987 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3988 IPR005358 Putative zinc- or iron-chelating domain containing protein CH55_399 IPR003680 Flavodoxin-like fold CH55_399 IPR023048 NADH-azoreductase, FMN-dependent CH55_399 IPR029039 Flavoprotein-like CH55_3990 IPR020193 Flagellin lysine-N-methylase, C-terminal CH55_3991 IPR000182 GNAT domain CH55_3991 IPR016181 Acyl-CoA N-acyltransferase CH55_3992 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CH55_3992 IPR002376 Formyl transferase, N-terminal CH55_3992 IPR004607 Phosphoribosylglycinamide formyltransferase CH55_3992 IPR036477 CH55_3992 CH55_3993 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CH55_3993 IPR010918 AIR synthase-related protein, C-terminal domain CH55_3993 IPR016188 PurM, N-terminal-like CH55_3993 IPR036676 CH55_3993 CH55_3993 IPR036921 CH55_3993 CH55_3994 IPR005765 Uracil phosphoribosyl transferase CH55_3994 IPR029057 Phosphoribosyltransferase-like CH55_3994 IPR034332 CH55_3994 CH55_3995 IPR002686 Transposase IS200-like CH55_3995 IPR036515 CH55_3995 CH55_3996 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CH55_3996 IPR017788 DnaA regulatory inactivator Hda CH55_3996 IPR020591 Chromosomal replication control, initiator DnaA-like CH55_3996 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CH55_3996 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_3997 IPR006659 Arsenate reductase CH55_3997 IPR006660 Arsenate reductase-like CH55_3997 IPR036249 CH55_3997 CH55_3998 IPR001915 Peptidase M48 CH55_3998 IPR011716 Tetratricopeptide TPR-3 CH55_3998 IPR011990 Tetratricopeptide-like helical domain CH55_3998 IPR030873 CH55_3998 CH55_3999 IPR002549 Uncharacterised protein family UPF0118 CH55_4 IPR005017 Membrane protein, aromatic hydrocarbon degradation CH55_40 IPR000086 NUDIX hydrolase domain CH55_40 IPR015797 NUDIX hydrolase domain-like CH55_40 IPR024195 NUDIX hydrolase, YfcD, predicted CH55_400 IPR007324 Sugar-binding domain, putative CH55_400 IPR036388 CH55_400 CH55_400 IPR037171 CH55_400 CH55_4002 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CH55_4002 IPR024706 Peroxiredoxin, AhpC-type CH55_4002 IPR036249 CH55_4002 CH55_4003 IPR016867 Glycine cleavage repressor GcvR CH55_4004 IPR002220 DapA-like CH55_4004 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CH55_4004 IPR013785 Aldolase-type TIM barrel CH55_4004 IPR020624 Dihydrodipicolinate synthetase, conserved site CH55_4004 IPR020625 Dihydrodipicolinate synthetase, active site CH55_4005 IPR010653 Lipoprotein, NlpB CH55_4005 IPR014524 Outer membrane protein assembly factor BamC CH55_4006 IPR002686 Transposase IS200-like CH55_4006 IPR036515 CH55_4006 CH55_4007 IPR002686 Transposase IS200-like CH55_4007 IPR036515 CH55_4007 CH55_4008 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CH55_4008 IPR018236 SAICAR synthetase, conserved site CH55_4008 IPR028923 SAICAR synthetase/ADE2, N-terminal CH55_4009 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CH55_401 IPR000669 Mannitol dehydrogenase CH55_401 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_401 IPR013118 Mannitol dehydrogenase, C-terminal CH55_401 IPR013131 Mannitol dehydrogenase, N-terminal CH55_401 IPR013328 Dehydrogenase, multihelical CH55_401 IPR036291 CH55_401 CH55_4010 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CH55_4011 IPR007382 Uncharacterised protein family UPF0756, transmembrame CH55_4012 IPR000182 GNAT domain CH55_4012 IPR007807 Helicase domain CH55_4012 IPR013562 Domain of unknown function DUF1726 CH55_4012 IPR016181 Acyl-CoA N-acyltransferase CH55_4012 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA CH55_4012 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4012 IPR033442 CH55_4012 CH55_4012 IPR038321 CH55_4012 CH55_4013 IPR020910 Uncharacterised protein family UPF0370 CH55_4014 IPR003709 Peptidase M15B/M15C CH55_4014 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CH55_4015 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CH55_4015 IPR002933 Peptidase M20 CH55_4015 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CH55_4015 IPR011650 Peptidase M20, dimerisation domain CH55_4015 IPR036264 CH55_4015 CH55_4016 IPR006504 Transcriptional regulator Spx/MgsR CH55_4016 IPR006660 Arsenate reductase-like CH55_4016 IPR036249 CH55_4016 CH55_4017 IPR011990 Tetratricopeptide-like helical domain CH55_4018 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_4019 IPR000515 MetI-like domain CH55_4019 IPR035906 CH55_4019 CH55_402 IPR008309 Uncharacterised conserved protein UCP025560 CH55_4020 IPR003439 ABC transporter-like CH55_4020 IPR003593 AAA+ ATPase domain CH55_4020 IPR008995 Molybdate/tungstate binding, C-terminal CH55_4020 IPR017871 ABC transporter, conserved site CH55_4020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4021 IPR000917 Sulfatase CH55_4021 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_4021 IPR017850 Alkaline-phosphatase-like, core domain CH55_4021 IPR024607 Sulfatase, conserved site CH55_4022 IPR007197 Radical SAM CH55_4022 IPR013785 Aldolase-type TIM barrel CH55_4022 IPR023885 4Fe4S-binding SPASM domain CH55_4023 IPR007404 Protein of unknown function DUF457 CH55_4026 IPR001036 Acriflavin resistance protein CH55_4026 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CH55_4026 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_4027 IPR001036 Acriflavin resistance protein CH55_4027 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CH55_4028 IPR017162 Uncharacterised conserved protein UCP037266 CH55_4028 IPR036388 CH55_4028 CH55_4029 IPR000792 Transcription regulator LuxR, C-terminal CH55_4029 IPR001789 Signal transduction response regulator, receiver domain CH55_4029 IPR011006 CheY-like superfamily CH55_4029 IPR016032 Signal transduction response regulator, C-terminal effector CH55_403 IPR025985 YnbE-like lipoprotein CH55_4030 IPR004496 Ferredoxin-type protein NapF CH55_4030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_4030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_4031 IPR005623 Chaperone NapD, nitrate reductase assembly CH55_4032 IPR006656 Molybdopterin oxidoreductase CH55_4032 IPR006657 Molydopterin dinucleotide-binding domain CH55_4032 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH55_4032 IPR009010 Aspartate decarboxylase-like domain CH55_4032 IPR010051 Periplasmic nitrate reductase, large subunit CH55_4032 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH55_4032 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH55_4033 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CH55_4033 IPR036280 CH55_4033 CH55_4034 IPR005126 NapC/NirT cytochrome c, N-terminal CH55_4034 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CH55_4034 IPR024717 Denitrification system component NapC/NirT/NrfH CH55_4034 IPR036280 CH55_4034 CH55_4034 IPR038266 CH55_4034 CH55_4035 IPR000086 NUDIX hydrolase domain CH55_4035 IPR004385 Nucleoside diphosphate pyrophosphatase CH55_4035 IPR015797 NUDIX hydrolase domain-like CH55_4036 IPR002505 Phosphate acetyl/butaryl transferase CH55_4036 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase CH55_4036 IPR012301 Malic enzyme, N-terminal domain CH55_4036 IPR012302 Malic enzyme, NAD-binding CH55_4036 IPR015884 Malic enzyme, conserved site CH55_4036 IPR036291 CH55_4036 CH55_4036 IPR037062 CH55_4036 CH55_4037 IPR003791 Protein of unknown function UPF0178 CH55_4038 IPR001260 Coproporphyrinogen III oxidase, aerobic CH55_4038 IPR018375 Coproporphyrinogen III oxidase, conserved site CH55_4038 IPR036406 CH55_4038 CH55_4039 IPR000182 GNAT domain CH55_4039 IPR016181 Acyl-CoA N-acyltransferase CH55_4039 IPR023072 Acetyltransferase, YpeA CH55_404 IPR021730 Dicarboxylate transport CH55_4042 IPR003991 Pertactin virulence factor family CH55_4042 IPR004899 Pertactin, central region CH55_4042 IPR005546 Autotransporter beta-domain CH55_4042 IPR006315 Outer membrane autotransporter barrel CH55_4042 IPR011050 Pectin lyase fold/virulence factor CH55_4042 IPR012332 P22 tailspike C-terminal domain-like CH55_4042 IPR036709 CH55_4042 CH55_4043 IPR005220 Viral OB-fold, YgiW CH55_4043 IPR036700 CH55_4043 CH55_4045 IPR010938 Protein of unknown function DUF1131 CH55_4045 IPR038714 CH55_4045 CH55_4046 IPR006314 Dyp-type peroxidase CH55_4046 IPR011008 Dimeric alpha-beta barrel CH55_4047 IPR002220 DapA-like CH55_4047 IPR013785 Aldolase-type TIM barrel CH55_4047 IPR020624 Dihydrodipicolinate synthetase, conserved site CH55_4048 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CH55_4048 IPR011060 Ribulose-phosphate binding barrel CH55_4048 IPR013785 Aldolase-type TIM barrel CH55_4049 IPR001611 Leucine-rich repeat CH55_4049 IPR003591 Leucine-rich repeat, typical subtype CH55_4049 IPR032674 CH55_4049 CH55_4049 IPR032675 CH55_4049 CH55_405 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH55_405 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH55_405 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CH55_405 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CH55_405 IPR036291 CH55_405 CH55_4050 IPR000600 ROK CH55_4050 IPR023945 N-acetylmannosamine kinase, bacterial CH55_4051 IPR004375 Conserved hypothetical protein CHP00022 CH55_4051 IPR037012 CH55_4051 CH55_4052 IPR000281 Helix-turn-helix protein RpiR CH55_4052 IPR001347 Sugar isomerase (SIS) CH55_4052 IPR009057 Homeodomain-like CH55_4052 IPR036388 CH55_4052 CH55_4053 IPR004742 Sialic acid transporter CH55_4053 IPR011701 Major facilitator superfamily CH55_4053 IPR036259 CH55_4053 CH55_4054 IPR005669 Thiosulphate/Sulfate-binding protein CH55_4055 IPR000515 MetI-like domain CH55_4055 IPR005667 Sulphate ABC transporter permease protein 2 CH55_4055 IPR011865 Sulphate ABC transporter, permease protein CysT CH55_4055 IPR035906 CH55_4055 CH55_4056 IPR000515 MetI-like domain CH55_4056 IPR005667 Sulphate ABC transporter permease protein 2 CH55_4056 IPR011866 Sulphate ABC transporter, permease protein CysW CH55_4056 IPR035906 CH55_4056 CH55_4057 IPR003439 ABC transporter-like CH55_4057 IPR003593 AAA+ ATPase domain CH55_4057 IPR005666 Sulphate transport system permease protein 1 CH55_4057 IPR008995 Molybdate/tungstate binding, C-terminal CH55_4057 IPR017871 ABC transporter, conserved site CH55_4057 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4058 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CH55_4058 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_4058 IPR005856 Cysteine synthase K/M CH55_4058 IPR005858 Cysteine synthase B CH55_4058 IPR036052 CH55_4058 CH55_4059 IPR032675 CH55_4059 CH55_406 IPR005184 Domain of unknown function DUF306, Meta/HslJ CH55_406 IPR038670 CH55_406 CH55_4060 IPR001789 Signal transduction response regulator, receiver domain CH55_4060 IPR001867 Signal transduction response regulator, C-terminal CH55_4060 IPR011006 CheY-like superfamily CH55_4060 IPR016032 Signal transduction response regulator, C-terminal effector CH55_4060 IPR036388 CH55_4060 CH55_4061 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_4061 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_4061 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_4061 IPR036097 CH55_4061 CH55_4061 IPR036890 CH55_4061 CH55_4062 IPR002035 von Willebrand factor, type A CH55_4062 IPR036465 CH55_4062 CH55_4063 IPR004839 Aminotransferase, class I/classII CH55_4063 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_4063 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_4063 IPR015424 Pyridoxal phosphate-dependent transferase CH55_4063 IPR027619 Putative C-S lyase CH55_4064 IPR000587 Creatinase, N-terminal CH55_4064 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH55_4065 IPR000587 Creatinase, N-terminal CH55_4065 IPR000994 Peptidase M24, structural domain CH55_4065 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CH55_4065 IPR036005 CH55_4065 CH55_4066 IPR021741 Protein of unknown function DUF3311 CH55_4067 IPR038377 CH55_4067 CH55_4068 IPR001763 Rhodanese-like domain CH55_4068 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH55_4068 IPR016156 FAD/NAD-linked reductase, dimerisation domain CH55_4068 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CH55_4068 IPR036188 CH55_4068 CH55_4068 IPR036873 CH55_4068 CH55_4069 IPR003439 ABC transporter-like CH55_4069 IPR003593 AAA+ ATPase domain CH55_4069 IPR003838 Permease FtsX-like CH55_4069 IPR017871 ABC transporter, conserved site CH55_4069 IPR025857 MacB-like periplasmic core domain CH55_4069 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4070 IPR006143 RND efflux pump, membrane fusion protein CH55_4070 IPR032317 CH55_4070 CH55_4071 IPR001789 Signal transduction response regulator, receiver domain CH55_4071 IPR001867 Signal transduction response regulator, C-terminal CH55_4071 IPR011006 CheY-like superfamily CH55_4071 IPR016032 Signal transduction response regulator, C-terminal effector CH55_4071 IPR036388 CH55_4071 CH55_4072 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_4072 IPR003660 HAMP linker domain CH55_4072 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_4072 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CH55_4072 IPR036097 CH55_4072 CH55_4072 IPR036890 CH55_4072 CH55_4074 IPR001270 ClpA/B family CH55_4074 IPR002611 IstB-like ATP-binding protein CH55_4074 IPR003593 AAA+ ATPase domain CH55_4074 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4076 IPR001584 Integrase, catalytic core CH55_4076 IPR006120 Resolvase, HTH domain CH55_4076 IPR009057 Homeodomain-like CH55_4076 IPR012337 Ribonuclease H-like domain CH55_4077 IPR002686 Transposase IS200-like CH55_4077 IPR036515 CH55_4077 CH55_4078 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CH55_4078 IPR011055 Duplicated hybrid motif CH55_4079 IPR000121 PEP-utilising enzyme, C-terminal CH55_4079 IPR006318 Phosphoenolpyruvate-utilising enzyme CH55_4079 IPR008279 PEP-utilising enzyme, mobile domain CH55_4079 IPR008731 Phosphotransferase system, enzyme I N-terminal CH55_4079 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_4079 IPR018274 PEP-utilising enzyme, active site CH55_4079 IPR023151 PEP-utilising enzyme, conserved site CH55_4079 IPR024692 Phosphotransferase system, enzyme I CH55_4079 IPR036618 CH55_4079 CH55_4079 IPR036637 CH55_4079 CH55_408 IPR003416 MgtC/SapB/SrpB transporter CH55_4080 IPR000032 Phosphocarrier HPr protein-like CH55_4080 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CH55_4080 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CH55_4080 IPR035895 CH55_4080 CH55_4081 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CH55_4081 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_4081 IPR005856 Cysteine synthase K/M CH55_4081 IPR005859 Cysteine synthase A CH55_4081 IPR036052 CH55_4081 CH55_4082 IPR022985 CysZ, gammaproteobacteria CH55_4083 IPR007449 ZipA, C-terminal FtsZ-binding domain CH55_4083 IPR011919 Cell division protein ZipA CH55_4083 IPR036765 CH55_4083 CH55_4084 IPR001357 BRCT domain CH55_4084 IPR001679 NAD-dependent DNA ligase CH55_4084 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CH55_4084 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CH55_4084 IPR004150 NAD-dependent DNA ligase, OB-fold CH55_4084 IPR010994 RuvA domain 2-like CH55_4084 IPR012340 Nucleic acid-binding, OB-fold CH55_4084 IPR013839 NAD-dependent DNA ligase, adenylation CH55_4084 IPR013840 NAD-dependent DNA ligase, N-terminal CH55_4084 IPR018239 NAD-dependent DNA ligase, active site CH55_4084 IPR033136 CH55_4084 CH55_4084 IPR036420 CH55_4084 CH55_4085 IPR024530 Protein of unknown function DUF3820 CH55_4086 IPR025577 FlxA-like protein CH55_4087 IPR009267 Protein of unknown function DUF925 CH55_409 IPR000390 Small multidrug resistance protein family CH55_4091 IPR002686 Transposase IS200-like CH55_4091 IPR036515 CH55_4091 CH55_4092 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CH55_4092 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_4092 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CH55_4092 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CH55_4092 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_4092 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CH55_4092 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CH55_4096 IPR002668 Concentrative nucleoside transporter N-terminal domain CH55_4096 IPR011642 Nucleoside recognition Gate CH55_4096 IPR011657 Concentrative nucleoside transporter C-terminal domain CH55_4097 IPR001046 NRAMP family CH55_4098 IPR019638 Protein of unknown function DUF2502 CH55_4099 IPR023210 NADP-dependent oxidoreductase domain CH55_4099 IPR036812 CH55_4099 CH55_41 IPR004703 Phosphotransferase system, sugar-specific permease component CH55_410 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CH55_410 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CH55_410 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CH55_410 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH55_410 IPR011895 Pyruvate-flavodoxin oxidoreductase CH55_410 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_410 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_410 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain CH55_410 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CH55_410 IPR029061 Thiamin diphosphate-binding fold CH55_410 IPR033412 CH55_410 CH55_410 IPR037112 CH55_410 CH55_4100 IPR000847 Transcription regulator HTH, LysR CH55_4100 IPR005119 LysR, substrate-binding CH55_4100 IPR036388 CH55_4100 CH55_4100 IPR036390 CH55_4100 CH55_4101 IPR007896 Transmembrane pair, bacterial CH55_4102 IPR003836 Glucokinase CH55_4103 IPR010856 Protein of unknown function DUF1479 CH55_4103 IPR027443 Isopenicillin N synthase-like CH55_4104 IPR004839 Aminotransferase, class I/classII CH55_4104 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_4104 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_4104 IPR015424 Pyridoxal phosphate-dependent transferase CH55_4105 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CH55_4105 IPR016174 Di-haem cytochrome, transmembrane CH55_4106 IPR031807 CH55_4106 CH55_4107 IPR005534 Curli production assembly/transport component CsgG CH55_4108 IPR014508 Uncharacterised conserved protein, TPR-like repeat CH55_4109 IPR008517 Protein of unknown function DUF799 CH55_411 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CH55_411 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA CH55_411 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_411 IPR035107 CH55_411 CH55_4110 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_4110 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_4111 IPR020945 DMSO/Nitrate reductase chaperone CH55_4111 IPR026269 Tat proofreading chaperone DmsD-type CH55_4111 IPR036411 CH55_4111 CH55_4112 IPR007059 DMSO reductase anchor subunit (DmsC) CH55_4113 IPR014297 Dimethylsulphoxide reductase, chain B CH55_4113 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_4113 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_4114 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CH55_4114 IPR006656 Molybdopterin oxidoreductase CH55_4114 IPR006657 Molydopterin dinucleotide-binding domain CH55_4114 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH55_4114 IPR009010 Aspartate decarboxylase-like domain CH55_4114 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CH55_4114 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CH55_4114 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CH55_4115 IPR025320 Protein of unknown function DUF4225 CH55_4116 IPR008514 Type VI secretion system effector, Hcp CH55_4116 IPR036624 CH55_4116 CH55_4117 IPR014591 Uncharacterised conserved protein UCP034455 CH55_4117 IPR021125 Protein of unknown function DUF2127 CH55_4118 IPR003439 ABC transporter-like CH55_4118 IPR003593 AAA+ ATPase domain CH55_4118 IPR008995 Molybdate/tungstate binding, C-terminal CH55_4118 IPR017871 ABC transporter, conserved site CH55_4118 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4119 IPR000515 MetI-like domain CH55_4119 IPR035906 CH55_4119 CH55_4120 IPR000515 MetI-like domain CH55_4120 IPR035906 CH55_4120 CH55_4121 IPR006061 Bacterial extracellular solute-binding family 1, conserved site CH55_4121 IPR026045 Ferric binding protein CH55_4122 IPR011757 Lytic transglycosylase MltB CH55_4122 IPR023346 Lysozyme-like domain CH55_4122 IPR031304 CH55_4122 CH55_4123 IPR000792 Transcription regulator LuxR, C-terminal CH55_4123 IPR016032 Signal transduction response regulator, C-terminal effector CH55_4123 IPR036388 CH55_4123 CH55_4124 IPR014894 Protein DcrB CH55_4124 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CH55_4125 IPR006664 Outer membrane protein, bacterial CH55_4125 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_4125 IPR036737 CH55_4125 CH55_4127 IPR021067 Glycosyltransferase, GlcNAc CH55_4127 IPR029044 Nucleotide-diphospho-sugar transferases CH55_4128 IPR000259 Fimbrial-type adhesion domain CH55_4128 IPR008966 Adhesion domain CH55_4128 IPR036937 CH55_4128 CH55_4129 IPR010657 ImpA, N-terminal CH55_413 IPR013094 Alpha/beta hydrolase fold-3 CH55_413 IPR029058 Alpha/Beta hydrolase fold CH55_4130 IPR010732 Protein of unknown function DUF1305 CH55_4131 IPR010272 Type VI secretion system, VCA0110 CH55_4132 IPR001270 ClpA/B family CH55_4132 IPR003593 AAA+ ATPase domain CH55_4132 IPR003959 ATPase, AAA-type, core CH55_4132 IPR004176 Clp, N-terminal CH55_4132 IPR017729 Type VI secretion system, ATPase ClpV1 CH55_4132 IPR018368 ClpA/B, conserved site 1 CH55_4132 IPR019489 Clp ATPase, C-terminal CH55_4132 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4132 IPR028299 ClpA/B, conserved site 2 CH55_4132 IPR036628 CH55_4132 CH55_4133 IPR008966 Adhesion domain CH55_4133 IPR036937 CH55_4133 CH55_4133 IPR039458 CH55_4133 CH55_4134 IPR001829 Pili assembly chaperone, bacterial CH55_4134 IPR008962 PapD-like CH55_4134 IPR013783 Immunoglobulin-like fold CH55_4134 IPR016147 PapD, N-terminal, bacterial CH55_4134 IPR016148 Pili assembly chaperone, C-terminal domain CH55_4134 IPR018046 Pili assembly chaperone, conserved site CH55_4134 IPR036316 CH55_4134 CH55_4135 IPR000015 Outer membrane usher protein CH55_4135 IPR025885 PapC, N-terminal domain CH55_4135 IPR037224 CH55_4135 CH55_4136 IPR001207 Transposase, mutator type CH55_4137 IPR001207 Transposase, mutator type CH55_4138 IPR000015 Outer membrane usher protein CH55_4138 IPR025949 PapC-like, C-terminal domain CH55_4139 IPR000259 Fimbrial-type adhesion domain CH55_4139 IPR008966 Adhesion domain CH55_4139 IPR036937 CH55_4139 CH55_414 IPR000551 MerR-type HTH domain CH55_414 IPR009061 DNA binding domain, putative CH55_4140 IPR008312 Uncharacterised conserved protein UCP028301 CH55_4141 IPR010269 Protein of unknown function DUF877 CH55_4142 IPR008514 Type VI secretion system effector, Hcp CH55_4142 IPR036624 CH55_4142 CH55_4143 IPR017734 Type VI secretion system, lipoprotein SciN CH55_4143 IPR038706 CH55_4143 CH55_4144 IPR010263 Protein of unknown function DUF876 CH55_4145 IPR017732 Type IV / VI secretion system, DotU CH55_4145 IPR038522 CH55_4145 CH55_4146 IPR001584 Integrase, catalytic core CH55_4146 IPR006120 Resolvase, HTH domain CH55_4146 IPR009057 Homeodomain-like CH55_4146 IPR012337 Ribonuclease H-like domain CH55_4148 IPR002611 IstB-like ATP-binding protein CH55_4148 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4149 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CH55_4149 IPR017732 Type IV / VI secretion system, DotU CH55_4149 IPR017733 Type VI secretion system, OmpA/MotB domain CH55_4149 IPR036737 CH55_4149 CH55_4149 IPR038522 CH55_4149 CH55_415 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CH55_4150 IPR009612 ImcF-related CH55_4150 IPR010623 Domain of unknown function DUF1215 CH55_4150 IPR017731 Type VI secretion system, IcmF CH55_4150 IPR025743 ImcF-related, N-terminal domain CH55_4150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4151 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CH55_4151 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CH55_4151 IPR037026 CH55_4151 CH55_4152 IPR008727 PAAR motif CH55_4154 IPR009211 Predicted virulence protein, SciE type CH55_4154 IPR011990 Tetratricopeptide-like helical domain CH55_4155 IPR007048 GpW/Gp25/anti-adapter protein IraD CH55_4157 IPR004624 PhnA protein CH55_4157 IPR013987 PhnA protein, N-terminal CH55_4157 IPR013988 PhnA protein, C-terminal CH55_4158 IPR018702 Protein of unknown function DUF2207, membrane CH55_4159 IPR007156 LemA CH55_4159 IPR023353 LemA-like domain CH55_416 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_416 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CH55_416 IPR030678 CH55_416 CH55_4162 IPR003439 ABC transporter-like CH55_4162 IPR003593 AAA+ ATPase domain CH55_4162 IPR005895 ABC transporter, haem export, CcmA CH55_4162 IPR017871 ABC transporter, conserved site CH55_4162 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4163 IPR003544 Cytochrome c-type biogenesis protein CcmB CH55_4163 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CH55_4164 IPR002541 Cytochrome c assembly protein CH55_4164 IPR003557 Cytochrome c-type biogenesis protein CcmC CH55_4165 IPR007078 Haem exporter protein D (CcmD) CH55_4166 IPR004329 CcmE/CycJ protein CH55_4166 IPR036127 CH55_4166 CH55_4167 IPR002541 Cytochrome c assembly protein CH55_4167 IPR003567 Cytochrome c-type biogenesis protein CH55_4167 IPR003568 Cytochrome c-type biogenesis protein CcmF CH55_4167 IPR032523 CH55_4167 CH55_4168 IPR036895 CH55_4168 CH55_417 IPR000834 Peptidase M14, carboxypeptidase A CH55_4174 IPR002421 5'-3' exonuclease, N-terminal CH55_4174 IPR008918 Helix-hairpin-helix motif, class 2 CH55_4174 IPR020045 5'-3' exonuclease, C-terminal domain CH55_4174 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CH55_4174 IPR029060 PIN domain-like CH55_4174 IPR036279 CH55_4174 CH55_4176 IPR013765 DNA recombination and repair protein RecA CH55_4176 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4178 IPR001107 Band 7 protein CH55_4179 IPR019701 Bacteriophage P22, NinX CH55_418 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CH55_418 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH55_418 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CH55_418 IPR029017 Enolase N-terminal domain-like CH55_418 IPR029065 Enolase C-terminal domain-like CH55_418 IPR036849 CH55_418 CH55_4185 IPR000525 Initiator Rep protein CH55_4188 IPR001638 Extracellular solute-binding protein, family 3 CH55_4188 IPR015168 SsuA/THI5-like CH55_4189 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CH55_4189 IPR029052 Metallo-dependent phosphatase-like CH55_419 IPR002065 Putative thiol peroxidase Tpx CH55_419 IPR013740 Redoxin CH55_419 IPR018219 Thiol peroxidase conserved site CH55_419 IPR036249 CH55_419 CH55_4191 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4191 IPR038729 CH55_4191 CH55_4193 IPR012337 Ribonuclease H-like domain CH55_4193 IPR036397 CH55_4193 CH55_4194 IPR002686 Transposase IS200-like CH55_4194 IPR036515 CH55_4194 CH55_4195 IPR002686 Transposase IS200-like CH55_4195 IPR036515 CH55_4195 CH55_4198 IPR003223 Flagellin phase1 repressor CH55_42 IPR001207 Transposase, mutator type CH55_420 IPR002686 Transposase IS200-like CH55_420 IPR036515 CH55_420 CH55_4201 IPR001650 Helicase, C-terminal CH55_4201 IPR011545 DEAD/DEAH box helicase domain CH55_4201 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_4201 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4202 IPR003115 ParB/Sulfiredoxin CH55_4202 IPR036086 CH55_4202 CH55_4203 IPR003115 ParB/Sulfiredoxin CH55_4203 IPR036086 CH55_4203 CH55_4204 IPR003439 ABC transporter-like CH55_4204 IPR003593 AAA+ ATPase domain CH55_4204 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH55_4204 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4206 IPR016181 Acyl-CoA N-acyltransferase CH55_4209 IPR004921 Terminase, large subunit CH55_4209 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_421 IPR000014 PAS domain CH55_421 IPR002078 RNA polymerase sigma factor 54 interaction domain CH55_421 IPR003593 AAA+ ATPase domain CH55_421 IPR009057 Homeodomain-like CH55_421 IPR013767 PAS fold CH55_421 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CH55_421 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH55_421 IPR025944 Sigma-54 interaction domain, conserved site CH55_421 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_421 IPR030828 CH55_421 CH55_421 IPR035965 CH55_421 CH55_4214 IPR003343 Bacterial Ig-like, group 2 CH55_4214 IPR008964 Invasin/intimin cell-adhesion CH55_422 IPR011979 Conserved hypothetical protein CHP02293 CH55_422 IPR024467 Domain of unknown function DUF2384 CH55_4220 IPR003343 Bacterial Ig-like, group 2 CH55_4220 IPR008964 Invasin/intimin cell-adhesion CH55_4223 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CH55_4223 IPR013491 Caudovirus, tape measure, N-terminal CH55_4224 IPR010265 Bacteriophage lambda, GpM, minor tail CH55_4225 IPR006487 Bacteriophage lambda, GpL, minor tail CH55_4226 IPR000064 Endopeptidase, NLPC/P60 domain CH55_4226 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain CH55_4226 IPR028090 JAB domain, prokaryotic CH55_4226 IPR038765 CH55_4226 CH55_4228 IPR013783 Immunoglobulin-like fold CH55_4228 IPR015406 Domain of unknown function DUF1983 CH55_4228 IPR021034 Domain of unknown function, DUF3672 CH55_4228 IPR032876 CH55_4228 CH55_4228 IPR036116 CH55_4228 CH55_4229 IPR025484 Domain of unknown function DUF4376 CH55_423 IPR014914 RES CH55_4230 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 CH55_4230 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CH55_4230 IPR011083 Phage tail collar domain CH55_4230 IPR037053 CH55_4230 CH55_4232 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CH55_4233 IPR001270 ClpA/B family CH55_4233 IPR002611 IstB-like ATP-binding protein CH55_4233 IPR003593 AAA+ ATPase domain CH55_4233 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4233 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_4234 IPR001584 Integrase, catalytic core CH55_4234 IPR006120 Resolvase, HTH domain CH55_4234 IPR009057 Homeodomain-like CH55_4234 IPR012337 Ribonuclease H-like domain CH55_4238 IPR025285 Domain of unknown function DUF4145 CH55_4239 IPR001207 Transposase, mutator type CH55_424 IPR006507 Uncharacterised protein family UPF0283 CH55_424 IPR021147 Protein of unknown function DUF697 CH55_4240 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CH55_4240 IPR003346 Transposase, IS116/IS110/IS902 CH55_4241 IPR000477 Reverse transcriptase domain CH55_4242 IPR001736 Phospholipase D/Transphosphatidylase CH55_4243 IPR025202 Phospholipase D-like domain CH55_4245 IPR006842 Transposase (putative), YhgA-like CH55_4245 IPR010106 Conserved hypothetical protein CHP01784 CH55_4246 IPR006118 Recombinase, conserved site CH55_4246 IPR006119 Resolvase, N-terminal CH55_4246 IPR036162 CH55_4246 CH55_4247 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH55_4247 IPR035093 CH55_4247 CH55_4248 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CH55_4248 IPR036165 CH55_4248 CH55_4249 IPR025669 AAA domain CH55_4249 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_425 IPR007413 Protein of unknown function DUF463, YcjX-like protein CH55_4250 IPR003115 ParB/Sulfiredoxin CH55_4250 IPR004437 ParB/RepB/Spo0J partition protein family CH55_4250 IPR014884 ParB protein family, C-terminal CH55_4251 IPR003593 AAA+ ATPase domain CH55_4251 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4253 IPR001091 Restriction/modification DNA-methylase CH55_4253 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_4253 IPR002941 DNA methylase N-4/N-6 CH55_4253 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_4255 IPR009811 Protein of unknown function DUF1380 CH55_4257 IPR009899 Antirestriction CH55_4258 IPR009253 Protein of unknown function DUF905 CH55_4258 IPR038612 CH55_4258 CH55_4259 IPR003115 ParB/Sulfiredoxin CH55_4259 IPR036086 CH55_4259 CH55_426 IPR014321 Phage shock protein, PspD CH55_4260 IPR001584 Integrase, catalytic core CH55_4260 IPR006120 Resolvase, HTH domain CH55_4260 IPR009057 Homeodomain-like CH55_4260 IPR012337 Ribonuclease H-like domain CH55_4261 IPR001270 ClpA/B family CH55_4261 IPR002611 IstB-like ATP-binding protein CH55_4261 IPR003593 AAA+ ATPase domain CH55_4261 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4261 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_4262 IPR012310 DNA ligase, ATP-dependent, central CH55_4262 IPR012340 Nucleic acid-binding, OB-fold CH55_4262 IPR016306 DNA ligase, ATP-dependent, bacteriophage T3-type CH55_4267 IPR009057 Homeodomain-like CH55_4267 IPR011256 Regulatory factor, effector binding domain CH55_4267 IPR018060 DNA binding HTH domain, AraC-type CH55_4267 IPR018062 HTH domain AraC-type, conserved site CH55_4267 IPR020449 Transcription regulator HTH, AraC- type CH55_4267 IPR029442 GyrI-like small molecule binding domain CH55_4269 IPR001829 Pili assembly chaperone, bacterial CH55_4269 IPR008962 PapD-like CH55_4269 IPR013783 Immunoglobulin-like fold CH55_4269 IPR016147 PapD, N-terminal, bacterial CH55_4269 IPR016148 Pili assembly chaperone, C-terminal domain CH55_4269 IPR018046 Pili assembly chaperone, conserved site CH55_4269 IPR036316 CH55_4269 CH55_427 IPR007168 Phage shock protein, PspC, N-terminal CH55_427 IPR014320 Phage shock protein, PspC CH55_4270 IPR000015 Outer membrane usher protein CH55_4270 IPR018030 Fimbrial membrane usher, conserved site CH55_4270 IPR025949 PapC-like, C-terminal domain CH55_4271 IPR008966 Adhesion domain CH55_4271 IPR015335 Capsule antigen, Caf1 CH55_4271 IPR038699 CH55_4271 CH55_4273 IPR002104 Integrase, catalytic CH55_4273 IPR010998 Integrase, Lambda-type, N-terminal CH55_4273 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_4273 IPR013762 Integrase-like, catalytic core CH55_4275 IPR006538 Cobalt chelatase, CobT subunit CH55_4275 IPR025861 Cobalamin biosynthesis protein CobT VWA domain CH55_4275 IPR036465 CH55_4275 CH55_4276 IPR011704 ATPase, dynein-related, AAA domain CH55_4276 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4277 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH55_4277 IPR004013 PHP, C-terminal CH55_4277 IPR004805 DNA polymerase III, alpha subunit CH55_4277 IPR011708 Bacterial DNA polymerase III, alpha subunit CH55_4278 IPR003522 Type III secretion system outer membrane pore YscC/HrcC CH55_4278 IPR004845 Type II secretion system GspD, conserved site CH55_4278 IPR004846 Type II/III secretion system CH55_4278 IPR005644 NolW-like CH55_4278 IPR038591 CH55_4278 CH55_428 IPR009554 Phage shock protein, PspB CH55_4280 IPR005644 NolW-like CH55_4280 IPR038591 CH55_4280 CH55_4281 IPR010261 Tir chaperone protein (CesT) family CH55_4281 IPR013353 Type III secretion system chaperone YscB CH55_4282 IPR009057 Homeodomain-like CH55_4282 IPR018060 DNA binding HTH domain, AraC-type CH55_4282 IPR018062 HTH domain AraC-type, conserved site CH55_4282 IPR020449 Transcription regulator HTH, AraC- type CH55_4283 IPR003313 AraC-type arabinose-binding/dimerisation domain CH55_4283 IPR037923 CH55_4283 CH55_4284 IPR013400 Type III secretion system chaperone, YscW CH55_4284 IPR039366 CH55_4284 CH55_4285 IPR006135 Type III secretion system substrate exporter CH55_4285 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CH55_4285 IPR029025 Type III secretion system substrate exporter, C-terminal CH55_4286 IPR002010 Type III secretion system inner membrane R protein CH55_4286 IPR006304 Type III secretion protein SpaR/YscT CH55_4287 IPR002191 Bacterial export protein family 3 CH55_4287 IPR006306 Type III secretion protein HrpO CH55_4288 IPR005773 Yop virulence translocation protein R CH55_4288 IPR005838 Type III secretion system inner membrane P protein CH55_4289 IPR001543 Surface presentation of antigen (SpoA) CH55_4289 IPR003283 Type III secretion system outer membrane, SpaO CH55_4289 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO CH55_4289 IPR036429 CH55_4289 CH55_429 IPR007157 PspA/IM30 CH55_429 IPR014319 Phage shock protein, PspA CH55_4290 IPR013354 Type III secretion system needle length determinant, C-terminal domain CH55_4290 IPR021136 Flagellar hook-length control protein-like, C-terminal CH55_4291 IPR009929 Type III secretion sytem,YscO CH55_4292 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_4292 IPR005714 ATPase, type III secretion system, FliI/YscN CH55_4292 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH55_4292 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4293 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_4293 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CH55_4293 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4294 IPR010812 Hypersensitivity response secretion-like, HrpJ CH55_4294 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC CH55_4295 IPR013351 Type III secretion system effector delivery regulator TyeA-related CH55_4295 IPR015144 Type III secretion system effector delivery regulator TyeA CH55_4295 IPR038347 CH55_4295 CH55_4296 IPR012673 Type III secretion system chaperone SycN CH55_4297 IPR012672 Type III secretion system YscX CH55_4298 IPR011990 Tetratricopeptide-like helical domain CH55_4298 IPR016684 Type III secretion system chaperone, YscY CH55_4299 IPR001712 Type III secretion system FHIPEP CH55_4299 IPR006302 Type III secretion protein HrcV CH55_4299 IPR025505 FHIPEP conserved site CH55_43 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CH55_43 IPR036095 CH55_43 CH55_430 IPR002078 RNA polymerase sigma factor 54 interaction domain CH55_430 IPR002197 DNA binding HTH domain, Fis-type CH55_430 IPR003593 AAA+ ATPase domain CH55_430 IPR009057 Homeodomain-like CH55_430 IPR014317 Transcription activator PspF CH55_430 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CH55_430 IPR025944 Sigma-54 interaction domain, conserved site CH55_430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4300 IPR013405 Type III secretion system regulator, LcrR CH55_4300 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 CH55_4301 IPR009863 Type III secretion protein, LcrG CH55_4302 IPR005413 Low calcium response V antigen CH55_4302 IPR036139 CH55_4302 CH55_4303 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CH55_4303 IPR011716 Tetratricopeptide TPR-3 CH55_4303 IPR011990 Tetratricopeptide-like helical domain CH55_4303 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup CH55_4304 IPR006972 Secretion system effector C, SseC-like CH55_4305 IPR008898 YopD-like CH55_4308 IPR032674 CH55_4308 CH55_4308 IPR032675 CH55_4308 CH55_4309 IPR001207 Transposase, mutator type CH55_431 IPR000914 Bacterial extracellular solute-binding protein, family 5 CH55_431 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CH55_431 IPR030678 CH55_431 CH55_4312 IPR010261 Tir chaperone protein (CesT) family CH55_4313 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen CH55_4313 IPR006473 Peptidase C58, YopT-type domain CH55_4313 IPR038765 CH55_4313 CH55_4314 IPR016505 Type III secretion system YopQ CH55_4315 IPR008874 Enterobacterial TraT complement resistance CH55_4316 IPR002514 Transposase IS3/IS911family CH55_4316 IPR009057 Homeodomain-like CH55_4317 IPR012337 Ribonuclease H-like domain CH55_4317 IPR025948 HTH-like domain CH55_4318 IPR001584 Integrase, catalytic core CH55_4318 IPR012337 Ribonuclease H-like domain CH55_432 IPR000515 MetI-like domain CH55_432 IPR035906 CH55_432 CH55_4320 IPR000551 MerR-type HTH domain CH55_4320 IPR009061 DNA binding domain, putative CH55_4320 IPR025669 AAA domain CH55_4320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4321 IPR003115 ParB/Sulfiredoxin CH55_4321 IPR004437 ParB/RepB/Spo0J partition protein family CH55_4321 IPR036086 CH55_4321 CH55_4323 IPR010985 Ribbon-helix-helix CH55_4323 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CH55_4323 IPR038296 CH55_4323 CH55_4324 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CH55_4324 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 CH55_4324 IPR035093 CH55_4324 CH55_4325 IPR003537 Yersinia virulence determinant YopE CH55_4325 IPR014773 Virulence factor YopE uncharacterised domain CH55_4325 IPR015110 YopE, N-terminal domain CH55_4325 IPR037168 CH55_4325 CH55_4326 IPR005416 Type III secretion chaperone SycE CH55_4326 IPR010261 Tir chaperone protein (CesT) family CH55_4327 IPR001584 Integrase, catalytic core CH55_4327 IPR012337 Ribonuclease H-like domain CH55_4327 IPR036397 CH55_4327 CH55_4328 IPR001584 Integrase, catalytic core CH55_4328 IPR012337 Ribonuclease H-like domain CH55_4329 IPR002611 IstB-like ATP-binding protein CH55_4329 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_433 IPR000515 MetI-like domain CH55_433 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CH55_433 IPR035906 CH55_433 CH55_4330 IPR010261 Tir chaperone protein (CesT) family CH55_4331 IPR001584 Integrase, catalytic core CH55_4331 IPR012337 Ribonuclease H-like domain CH55_4331 IPR025948 HTH-like domain CH55_4331 IPR036397 CH55_4331 CH55_4332 IPR002514 Transposase IS3/IS911family CH55_4332 IPR009057 Homeodomain-like CH55_4335 IPR006118 Recombinase, conserved site CH55_4335 IPR006119 Resolvase, N-terminal CH55_4335 IPR006120 Resolvase, HTH domain CH55_4335 IPR009057 Homeodomain-like CH55_4335 IPR036162 CH55_4335 CH55_4336 IPR025296 Domain of unknown function DUF4158 CH55_4338 IPR002513 Tn3 transposase DDE domain CH55_434 IPR003439 ABC transporter-like CH55_434 IPR003593 AAA+ ATPase domain CH55_434 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CH55_434 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4341 IPR005594 YadA-like, C-terminal CH55_4341 IPR008126 Outer membrane adhesion, Yersinia CH55_4341 IPR008635 Coiled stalk of trimeric autotransporter adhesin CH55_4341 IPR008640 Head domain of trimeric autotransporter adhesin CH55_4341 IPR011049 Serralysin-like metalloprotease, C-terminal CH55_4345 IPR002514 Transposase IS3/IS911family CH55_4345 IPR009057 Homeodomain-like CH55_4346 IPR001584 Integrase, catalytic core CH55_4346 IPR012337 Ribonuclease H-like domain CH55_4347 IPR025948 HTH-like domain CH55_4349 IPR019661 Replication regulatory protein RepA2 CH55_435 IPR003439 ABC transporter-like CH55_435 IPR003593 AAA+ ATPase domain CH55_435 IPR017871 ABC transporter, conserved site CH55_435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4351 IPR003446 Plasmid replication initiation, RepA CH55_4351 IPR017837 Plasmid replication initiator, RepA, IncFII type CH55_4354 IPR001584 Integrase, catalytic core CH55_4354 IPR012337 Ribonuclease H-like domain CH55_4357 IPR000719 Protein kinase domain CH55_4357 IPR003547 Serine/threonine protein kinase, yersinia-type CH55_4357 IPR008271 Serine/threonine-protein kinase, active site CH55_4357 IPR011009 Protein kinase-like domain CH55_4357 IPR019093 Rac1-binding domain CH55_4358 IPR003547 Serine/threonine protein kinase, yersinia-type CH55_4358 IPR019093 Rac1-binding domain CH55_4359 IPR005083 Serine/Threonine acetyltransferase, YopJ CH55_436 IPR029032 AhpD-like CH55_4360 IPR001584 Integrase, catalytic core CH55_4360 IPR012337 Ribonuclease H-like domain CH55_4360 IPR036397 CH55_4360 CH55_4361 IPR000242 Protein-tyrosine phosphatase, receptor/non-receptor type CH55_4361 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH CH55_4361 IPR003595 Protein-tyrosine phosphatase, catalytic CH55_4361 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal CH55_4361 IPR016130 Protein-tyrosine phosphatase, active site CH55_4361 IPR029021 Protein-tyrosine phosphatase-like CH55_4361 IPR036484 CH55_4361 CH55_4362 IPR001584 Integrase, catalytic core CH55_4362 IPR012337 Ribonuclease H-like domain CH55_4364 IPR002514 Transposase IS3/IS911family CH55_4364 IPR009057 Homeodomain-like CH55_4365 IPR015103 Protein-tyrosine phosphatase, YopH, N-terminal CH55_4365 IPR036484 CH55_4365 CH55_4366 IPR012842 Type III secretion system HrpE/YscL CH55_4366 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CH55_4367 IPR009510 Type III secretion system, secretion protein K CH55_4368 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CH55_4368 IPR006182 Secretory protein YscJ/FliF CH55_4369 IPR012670 Type III secretion system, YscI/HrpB CH55_4370 IPR013349 Type III secretion system effector YopR CH55_4371 IPR011990 Tetratricopeptide-like helical domain CH55_4371 IPR013348 Type III secretion system YscG CH55_4372 IPR011841 Type III secretion system, needle protein CH55_4372 IPR021123 Type III secretion, needle-protein-like CH55_4372 IPR037203 CH55_4372 CH55_4373 IPR012671 Type III secretion system, secretion protein E CH55_4374 IPR012843 Type III secretion system YscD/HrpQ CH55_4374 IPR032034 CH55_4374 CH55_4375 IPR000769 Regulatory protein Rop CH55_4375 IPR035962 CH55_4375 CH55_4376 IPR001270 ClpA/B family CH55_4376 IPR002611 IstB-like ATP-binding protein CH55_4376 IPR003593 AAA+ ATPase domain CH55_4376 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_4376 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_4378 IPR001584 Integrase, catalytic core CH55_4378 IPR006120 Resolvase, HTH domain CH55_4378 IPR009057 Homeodomain-like CH55_4378 IPR012337 Ribonuclease H-like domain CH55_4379 IPR009241 Addiction module killer protein CH55_438 IPR000109 Proton-dependent oligopeptide transporter family CH55_438 IPR005279 Amino acid/peptide transporter family CH55_438 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CH55_438 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A CH55_438 IPR036259 CH55_438 CH55_4380 IPR001387 Cro/C1-type helix-turn-helix domain CH55_4380 IPR010982 Lambda repressor-like, DNA-binding domain CH55_4380 IPR039554 CH55_4380 CH55_4381 IPR000036 Peptidase A26, omptin CH55_4381 IPR020079 Peptidase A26, omptin, conserved site CH55_4381 IPR020080 Outer membrane adhesin/peptidase omptin CH55_4383 IPR023346 Lysozyme-like domain CH55_4383 IPR031922 CH55_4383 CH55_4384 IPR031911 CH55_4384 CH55_439 IPR009698 Protein of unknown function DUF1282 CH55_44 IPR002178 PTS EIIA type-2 domain CH55_44 IPR016152 Phosphotransferase/anion transporter CH55_440 IPR020317 Uncharacterised protein family YjbD CH55_441 IPR004045 Glutathione S-transferase, N-terminal CH55_441 IPR004046 Glutathione S-transferase, C-terminal CH55_441 IPR036249 CH55_441 CH55_441 IPR036282 CH55_441 CH55_442 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase CH55_442 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CH55_442 IPR023685 Pyridoxal kinase PdxY CH55_442 IPR029056 Ribokinase-like CH55_443 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_443 IPR002305 Aminoacyl-tRNA synthetase, class Ic CH55_443 IPR002307 Tyrosine-tRNA ligase CH55_443 IPR002942 RNA-binding S4 domain CH55_443 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_443 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CH55_443 IPR036986 CH55_443 CH55_444 IPR000659 Pyridoxamine 5'-phosphate oxidase CH55_444 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain CH55_444 IPR012349 FMN-binding split barrel CH55_444 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CH55_444 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CH55_445 IPR018660 C-type lysozyme, inhibitor CH55_445 IPR036328 CH55_445 CH55_446 IPR005338 Anhydro-N-acetylmuramic acid kinase CH55_447 IPR008816 Glycine zipper 2TM domain CH55_448 IPR000835 MarR-type HTH domain CH55_448 IPR023071 Transcriptional regulator, SlyA CH55_448 IPR023187 Transcriptional regulator MarR-type, conserved site CH55_448 IPR036388 CH55_448 CH55_448 IPR036390 CH55_448 CH55_449 IPR000917 Sulfatase CH55_449 IPR012549 Domain of unknown function DUF1705 CH55_449 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CH55_449 IPR017850 Alkaline-phosphatase-like, core domain CH55_45 IPR000843 Transcription regulator HTH, LacI CH55_45 IPR010982 Lambda repressor-like, DNA-binding domain CH55_45 IPR028082 Periplasmic binding protein-like I CH55_450 IPR001647 DNA-binding HTH domain, TetR-type CH55_450 IPR009057 Homeodomain-like CH55_450 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CH55_450 IPR036271 CH55_450 CH55_451 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CH55_451 IPR013785 Aldolase-type TIM barrel CH55_452 IPR022385 Rhs repeat-associated core CH55_453 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CH55_453 IPR004361 Glyoxalase I CH55_453 IPR018146 Glyoxalase I, conserved site CH55_453 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH55_454 IPR005987 Ribonuclease T CH55_454 IPR012337 Ribonuclease H-like domain CH55_454 IPR013520 Exonuclease, RNase T/DNA polymerase III CH55_454 IPR036397 CH55_454 CH55_455 IPR002109 Glutaredoxin CH55_455 IPR004480 Monothiol glutaredoxin-related CH55_455 IPR014434 Monothiol glutaredoxin CH55_455 IPR036249 CH55_455 CH55_457 IPR000064 Endopeptidase, NLPC/P60 domain CH55_457 IPR038765 CH55_457 CH55_458 IPR001189 Manganese/iron superoxide dismutase CH55_458 IPR019831 Manganese/iron superoxide dismutase, N-terminal CH55_458 IPR019832 Manganese/iron superoxide dismutase, C-terminal CH55_458 IPR019833 Manganese/iron superoxide dismutase, binding site CH55_458 IPR036314 CH55_458 CH55_458 IPR036324 CH55_458 CH55_46 IPR002505 Phosphate acetyl/butaryl transferase CH55_46 IPR004614 Phosphate acetyltransferase CH55_46 IPR010766 DRTGG CH55_46 IPR016475 Phosphate acetyltransferase, bacteria CH55_46 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_46 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like CH55_460 IPR000847 Transcription regulator HTH, LysR CH55_460 IPR005119 LysR, substrate-binding CH55_460 IPR036388 CH55_460 CH55_460 IPR036390 CH55_460 CH55_461 IPR000843 Transcription regulator HTH, LacI CH55_461 IPR010982 Lambda repressor-like, DNA-binding domain CH55_462 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CH55_462 IPR011701 Major facilitator superfamily CH55_462 IPR036259 CH55_462 CH55_463 IPR003333 Mycolic acid cyclopropane synthase CH55_463 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_464 IPR001783 Lumazine-binding protein CH55_464 IPR017938 Riboflavin synthase-like beta-barrel CH55_464 IPR023366 ATP synthase subunit alpha-like domain CH55_464 IPR026017 Lumazine-binding domain CH55_465 IPR002528 Multi antimicrobial extrusion protein CH55_465 IPR022913 Multidrug resistance protein MdtK CH55_468 IPR001697 Pyruvate kinase CH55_468 IPR011037 Pyruvate kinase-like, insert domain CH55_468 IPR015793 Pyruvate kinase, barrel CH55_468 IPR015795 Pyruvate kinase, C-terminal CH55_468 IPR015806 Pyruvate kinase, beta-barrel insert domain CH55_468 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_468 IPR018209 Pyruvate kinase, active site CH55_468 IPR036918 CH55_468 CH55_469 IPR006817 Lipoprotein leucine-zipper CH55_469 IPR016367 Murein-lipoprotein CH55_47 IPR000890 Aliphatic acid kinase, short-chain CH55_47 IPR004372 Acetate/Proprionate kinase CH55_47 IPR023865 Aliphatic acid kinase, short-chain, conserved site CH55_471 IPR001584 Integrase, catalytic core CH55_471 IPR006120 Resolvase, HTH domain CH55_471 IPR009057 Homeodomain-like CH55_471 IPR012337 Ribonuclease H-like domain CH55_472 IPR002611 IstB-like ATP-binding protein CH55_473 IPR002611 IstB-like ATP-binding protein CH55_473 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_474 IPR005490 L,D-transpeptidase catalytic domain CH55_474 IPR038063 CH55_474 CH55_475 IPR003808 Fe-S metabolism associated domain, SufE-like CH55_475 IPR023939 Cysteine desulfuration protein SufE CH55_476 IPR000192 Aminotransferase class V domain CH55_476 IPR010970 Cysteine desulfurase, SufS CH55_476 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_476 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_476 IPR015424 Pyridoxal phosphate-dependent transferase CH55_476 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CH55_477 IPR000825 SUF system FeS cluster assembly, SufBD CH55_477 IPR011542 SUF system FeS cluster assembly, SufD CH55_477 IPR037284 CH55_477 CH55_478 IPR003439 ABC transporter-like CH55_478 IPR003593 AAA+ ATPase domain CH55_478 IPR010230 FeS cluster assembly SUF system, ATPase SufC CH55_478 IPR017871 ABC transporter, conserved site CH55_478 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_479 IPR000825 SUF system FeS cluster assembly, SufBD CH55_479 IPR010231 SUF system FeS cluster assembly, SufB CH55_479 IPR037284 CH55_479 CH55_48 IPR007334 Uncharacterised protein family UPF0208 CH55_480 IPR000361 FeS cluster biogenesis CH55_480 IPR016092 FeS cluster insertion protein CH55_480 IPR017870 FeS cluster insertion, C-terminal, conserved site CH55_480 IPR035903 CH55_480 CH55_481 IPR003736 Phenylacetic acid degradation-related domain CH55_481 IPR006683 Thioesterase superfamily CH55_481 IPR029069 HotDog domain CH55_481 IPR030863 CH55_481 CH55_482 IPR004113 FAD-linked oxidase, C-terminal CH55_482 IPR006094 FAD linked oxidase, N-terminal CH55_482 IPR009051 Alpha-helical ferredoxin CH55_482 IPR016164 FAD-linked oxidase-like, C-terminal CH55_482 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_482 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_482 IPR036318 CH55_482 CH55_483 IPR002549 Uncharacterised protein family UPF0118 CH55_484 IPR000121 PEP-utilising enzyme, C-terminal CH55_484 IPR008279 PEP-utilising enzyme, mobile domain CH55_484 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_484 IPR018274 PEP-utilising enzyme, active site CH55_484 IPR023151 PEP-utilising enzyme, conserved site CH55_484 IPR036637 CH55_484 CH55_485 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CH55_485 IPR013815 ATP-grasp fold, subdomain 1 CH55_486 IPR005177 Bifunctional kinase-pyrophosphorylase CH55_486 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain CH55_486 IPR026530 Phosphoenolpyruvate synthase regulatory protein CH55_487 IPR006218 DAHP synthetase I/KDSA CH55_487 IPR006219 DHAP synthase, class 1 CH55_487 IPR013785 Aldolase-type TIM barrel CH55_488 IPR003846 Uncharacterised protein family UPF0061 CH55_489 IPR003846 Uncharacterised protein family UPF0061 CH55_49 IPR005587 Uncharacterised protein family UPF0304, YfbU CH55_49 IPR023145 YfbU, helix-hairpin domain CH55_49 IPR023146 YfbU, alpha-helical bundle domain CH55_490 IPR004143 Biotin/lipoate A/B protein ligase CH55_490 IPR004562 Lipoyltransferase/lipoate-protein ligase CH55_490 IPR019491 Lipoate protein ligase, C-terminal CH55_490 IPR023741 Lipoate-protein ligase A CH55_491 IPR000064 Endopeptidase, NLPC/P60 domain CH55_491 IPR038765 CH55_491 CH55_492 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CH55_493 IPR000620 Drug/metabolite transporter CH55_493 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CH55_494 IPR003342 Glycosyl transferase, family 39 CH55_494 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase CH55_495 IPR002509 Polysaccharide deacetylase CH55_495 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_495 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable CH55_496 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_496 IPR002376 Formyl transferase, N-terminal CH55_496 IPR005793 Formyl transferase, C-terminal CH55_496 IPR011034 Formyl transferase, C-terminal-like CH55_496 IPR021168 Bifunctional polymyxin resistance protein, ArnA CH55_496 IPR036291 CH55_496 CH55_496 IPR036477 CH55_496 CH55_497 IPR001173 Glycosyltransferase 2-like CH55_497 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CH55_497 IPR029044 Nucleotide-diphospho-sugar transferases CH55_498 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CH55_498 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_498 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_498 IPR015424 Pyridoxal phosphate-dependent transferase CH55_498 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB CH55_499 IPR003439 ABC transporter-like CH55_499 IPR003593 AAA+ ATPase domain CH55_499 IPR017871 ABC transporter, conserved site CH55_499 IPR023693 ABC transporter, vitamin B12, BtuD CH55_499 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_5 IPR005272 Conserved hypothetical protein CHP00743 CH55_5 IPR035571 CH55_5 CH55_50 IPR006439 HAD hydrolase, subfamily IA CH55_50 IPR023198 Phosphoglycolate phosphatase, domain 2 CH55_50 IPR023214 HAD-like domain CH55_50 IPR036412 CH55_50 CH55_500 IPR000889 Glutathione peroxidase CH55_500 IPR029759 Glutathione peroxidase active site CH55_500 IPR033674 CH55_500 CH55_500 IPR036249 CH55_500 CH55_501 IPR000522 ABC transporter, permease protein CH55_501 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC CH55_501 IPR037294 CH55_501 CH55_502 IPR019638 Protein of unknown function DUF2502 CH55_503 IPR000119 Histone-like bacterial DNA-binding protein CH55_503 IPR005684 Integration host factor, alpha subunit CH55_503 IPR010992 Integration host factor (IHF)-like DNA-binding domain CH55_503 IPR020816 Histone-like DNA-binding protein, conserved site CH55_504 IPR002547 tRNA-binding domain CH55_504 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CH55_504 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding CH55_504 IPR005146 B3/B4 tRNA-binding domain CH55_504 IPR005147 tRNA synthetase, B5-domain CH55_504 IPR009061 DNA binding domain, putative CH55_504 IPR012340 Nucleic acid-binding, OB-fold CH55_504 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CH55_504 IPR036690 CH55_504 CH55_505 IPR002319 Phenylalanyl-tRNA synthetase CH55_505 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CH55_505 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CH55_505 IPR010978 tRNA-binding arm CH55_505 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CH55_506 IPR005813 Ribosomal protein L20 CH55_506 IPR035566 CH55_506 CH55_507 IPR001706 Ribosomal protein L35, non-mitochondrial CH55_507 IPR018265 Ribosomal protein L35, conserved site CH55_507 IPR021137 Ribosomal protein L35 CH55_507 IPR037229 CH55_507 CH55_508 IPR001288 Translation initiation factor 3 CH55_508 IPR019815 Translation initiation factor 3, C-terminal CH55_508 IPR036788 CH55_508 CH55_509 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CH55_509 IPR002320 Threonine-tRNA ligase, class IIa CH55_509 IPR004095 TGS CH55_509 IPR004154 Anticodon-binding CH55_509 IPR012675 Beta-grasp domain CH55_509 IPR012676 TGS-like CH55_509 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CH55_509 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CH55_509 IPR036621 CH55_509 CH55_51 IPR004680 Citrate transporter-like domain CH55_51 IPR006037 Regulator of K+ conductance, C-terminal CH55_51 IPR031312 CH55_51 CH55_51 IPR036721 CH55_51 CH55_510 IPR025309 KTSC domain CH55_512 IPR002771 Multiple antibiotic resistance (MarC)-related CH55_513 IPR000189 Prokaryotic transglycosylase, active site CH55_513 IPR008258 Lytic transglycosylase-like SLT domain CH55_513 IPR023346 Lysozyme-like domain CH55_514 IPR006127 Periplasmic solute binding protein family CH55_514 IPR006128 Adhesion lipoprotein CH55_514 IPR006129 Adhesin B CH55_515 IPR003439 ABC transporter-like CH55_515 IPR003593 AAA+ ATPase domain CH55_515 IPR017871 ABC transporter, conserved site CH55_515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_516 IPR001626 ABC-3 CH55_516 IPR037294 CH55_516 CH55_517 IPR001626 ABC-3 CH55_517 IPR037294 CH55_517 CH55_518 IPR011009 Protein kinase-like domain CH55_518 IPR016477 Fructosamine/Ketosamine-3-kinase CH55_519 IPR025229 YniB-like protein CH55_52 IPR003607 HD/PDEase domain CH55_52 IPR006674 HD domain CH55_52 IPR022971 5'-deoxynucleotidase YfbR CH55_520 IPR006439 HAD hydrolase, subfamily IA CH55_520 IPR023198 Phosphoglycolate phosphatase, domain 2 CH55_520 IPR023214 HAD-like domain CH55_520 IPR036412 CH55_520 CH55_521 IPR001207 Transposase, mutator type CH55_522 IPR011051 RmlC-like cupin domain CH55_522 IPR013096 Cupin 2, conserved barrel CH55_522 IPR014710 RmlC-like jelly roll fold CH55_522 IPR025499 Pectin degradation protein KdgF CH55_523 IPR007045 5-keto 4-deoxyuronate isomerase CH55_523 IPR011051 RmlC-like cupin domain CH55_523 IPR014710 RmlC-like jelly roll fold CH55_523 IPR021120 KduI/IolB isomerase CH55_523 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain CH55_524 IPR002347 Glucose/ribitol dehydrogenase CH55_524 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CH55_524 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_524 IPR036291 CH55_524 CH55_525 IPR010702 Periplasmic pectate lyase CH55_526 IPR000515 MetI-like domain CH55_526 IPR035906 CH55_526 CH55_527 IPR000515 MetI-like domain CH55_527 IPR035906 CH55_527 CH55_528 IPR003439 ABC transporter-like CH55_528 IPR003593 AAA+ ATPase domain CH55_528 IPR008995 Molybdate/tungstate binding, C-terminal CH55_528 IPR017871 ABC transporter, conserved site CH55_528 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_529 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_53 IPR004839 Aminotransferase, class I/classII CH55_53 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_53 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_53 IPR015424 Pyridoxal phosphate-dependent transferase CH55_530 IPR009331 Oligogalacturonate-specific porin CH55_531 IPR007404 Protein of unknown function DUF457 CH55_531 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted CH55_532 IPR001991 Sodium:dicarboxylate symporter CH55_532 IPR036458 CH55_532 CH55_533 IPR002477 Peptidoglycan binding-like CH55_533 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CH55_533 IPR036365 CH55_533 CH55_533 IPR036366 CH55_533 CH55_533 IPR036505 CH55_533 CH55_534 IPR005471 Transcription regulator IclR, N-terminal CH55_534 IPR014757 Transcription regulator IclR, C-terminal CH55_534 IPR029016 GAF domain-like CH55_534 IPR036388 CH55_534 CH55_534 IPR036390 CH55_534 CH55_535 IPR015943 WD40/YVTN repeat-like-containing domain CH55_535 IPR027946 Oligogalacturonate lyase domain CH55_536 IPR011701 Major facilitator superfamily CH55_536 IPR036259 CH55_536 CH55_537 IPR001829 Pili assembly chaperone, bacterial CH55_537 IPR008962 PapD-like CH55_537 IPR013783 Immunoglobulin-like fold CH55_537 IPR016147 PapD, N-terminal, bacterial CH55_537 IPR016148 Pili assembly chaperone, C-terminal domain CH55_537 IPR018046 Pili assembly chaperone, conserved site CH55_537 IPR036316 CH55_537 CH55_538 IPR000259 Fimbrial-type adhesion domain CH55_538 IPR008966 Adhesion domain CH55_538 IPR036937 CH55_538 CH55_539 IPR000015 Outer membrane usher protein CH55_539 IPR018030 Fimbrial membrane usher, conserved site CH55_539 IPR025885 PapC, N-terminal domain CH55_539 IPR025949 PapC-like, C-terminal domain CH55_539 IPR037224 CH55_539 CH55_54 IPR000847 Transcription regulator HTH, LysR CH55_54 IPR005119 LysR, substrate-binding CH55_54 IPR036388 CH55_54 CH55_54 IPR036390 CH55_54 CH55_540 IPR001829 Pili assembly chaperone, bacterial CH55_540 IPR008962 PapD-like CH55_540 IPR013783 Immunoglobulin-like fold CH55_540 IPR016147 PapD, N-terminal, bacterial CH55_540 IPR016148 Pili assembly chaperone, C-terminal domain CH55_540 IPR018046 Pili assembly chaperone, conserved site CH55_540 IPR036316 CH55_540 CH55_541 IPR008966 Adhesion domain CH55_541 IPR036937 CH55_541 CH55_541 IPR039458 CH55_541 CH55_542 IPR001915 Peptidase M48 CH55_542 IPR022919 Peptidase M48, protease HtpX, putative CH55_544 IPR001478 PDZ domain CH55_544 IPR004447 C-terminal-processing peptidase S41A CH55_544 IPR005151 Tail specific protease CH55_544 IPR020992 Tail specific protease, C-terminal CH55_544 IPR029045 ClpP/crotonase-like domain CH55_544 IPR036034 CH55_544 CH55_545 IPR016103 ProQ/FinO domain CH55_545 IPR023529 Transporter ProP effector, ProQ CH55_545 IPR035236 CH55_545 CH55_545 IPR036442 CH55_545 CH55_546 IPR003018 GAF domain CH55_546 IPR029016 GAF domain-like CH55_547 IPR005219 Conserved hypothetical protein CHP00155 CH55_547 IPR007498 Paraquat-inducible protein A CH55_548 IPR003399 Mammalian cell entry-related CH55_549 IPR003399 Mammalian cell entry-related CH55_55 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CH55_55 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CH55_55 IPR038430 CH55_55 CH55_550 IPR007893 Spore coat protein U CH55_551 IPR007893 Spore coat protein U CH55_552 IPR007893 Spore coat protein U CH55_553 IPR008962 PapD-like CH55_553 IPR013783 Immunoglobulin-like fold CH55_553 IPR016147 PapD, N-terminal, bacterial CH55_554 IPR000015 Outer membrane usher protein CH55_554 IPR025949 PapC-like, C-terminal domain CH55_555 IPR007893 Spore coat protein U CH55_556 IPR009950 Protein of unknown function DUF1480 CH55_557 IPR007374 ASCH domain CH55_557 IPR009326 Protein of unknown function DUF984 CH55_557 IPR015947 PUA-like domain CH55_558 IPR001584 Integrase, catalytic core CH55_558 IPR006120 Resolvase, HTH domain CH55_558 IPR009057 Homeodomain-like CH55_558 IPR012337 Ribonuclease H-like domain CH55_559 IPR001270 ClpA/B family CH55_559 IPR002611 IstB-like ATP-binding protein CH55_559 IPR003593 AAA+ ATPase domain CH55_559 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_559 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_56 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CH55_56 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CH55_560 IPR001267 Thymidine kinase CH55_560 IPR020633 Thymidine kinase, conserved site CH55_560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_561 IPR001801 Histone-like protein H-NS CH55_561 IPR027444 Histone-like protein H-NS, C-terminal domain CH55_561 IPR027454 Histone-like protein H-NS family, oligomerisation domain CH55_561 IPR037150 CH55_561 CH55_562 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CH55_562 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_562 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CH55_562 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CH55_562 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CH55_562 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CH55_562 IPR036220 CH55_562 CH55_562 IPR036291 CH55_562 CH55_563 IPR001789 Signal transduction response regulator, receiver domain CH55_563 IPR011006 CheY-like superfamily CH55_563 IPR028616 Regulator of RpoS CH55_563 IPR036457 CH55_563 CH55_564 IPR004027 SEC-C motif CH55_564 IPR023006 Uncharacterised protein family UPF0225 CH55_564 IPR032710 CH55_564 CH55_565 IPR001207 Transposase, mutator type CH55_566 IPR002376 Formyl transferase, N-terminal CH55_566 IPR002912 ACT domain CH55_566 IPR004810 Formyltetrahydrofolate deformylase CH55_566 IPR036477 CH55_566 CH55_569 IPR000847 Transcription regulator HTH, LysR CH55_569 IPR036388 CH55_569 CH55_569 IPR036390 CH55_569 CH55_57 IPR001135 NADH-quinone oxidoreductase, subunit D CH55_57 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CH55_57 IPR010218 NADH dehydrogenase, subunit C CH55_57 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CH55_57 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CH55_57 IPR023062 NADH dehydrogenase, subunit CD CH55_57 IPR029014 NiFe hydrogenase-like CH55_57 IPR037232 CH55_57 CH55_57 IPR038290 CH55_57 CH55_570 IPR004808 AP endonuclease 1 CH55_570 IPR005135 Endonuclease/exonuclease/phosphatase CH55_570 IPR020847 AP endonuclease 1, binding site CH55_570 IPR020848 AP endonuclease 1, conserved site CH55_570 IPR036691 CH55_570 CH55_571 IPR000086 NUDIX hydrolase domain CH55_571 IPR015797 NUDIX hydrolase domain-like CH55_571 IPR020084 NUDIX hydrolase, conserved site CH55_571 IPR020476 NUDIX hydrolase CH55_572 IPR009971 Protein of unknown function DUF1496 CH55_573 IPR003601 DNA topoisomerase, type IA, domain 2 CH55_573 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CH55_573 IPR005738 DNA topoisomerase III CH55_573 IPR006171 Toprim domain CH55_573 IPR013497 DNA topoisomerase, type IA, central CH55_573 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CH55_573 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CH55_573 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CH55_573 IPR023405 DNA topoisomerase, type IA, core domain CH55_573 IPR023406 DNA topoisomerase, type IA, active site CH55_574 IPR004536 Selenide water dikinase CH55_574 IPR010918 AIR synthase-related protein, C-terminal domain CH55_574 IPR016188 PurM, N-terminal-like CH55_574 IPR023061 Selenide, water dikinase, class I CH55_574 IPR036676 CH55_574 CH55_574 IPR036921 CH55_574 CH55_575 IPR000415 Nitroreductase-like CH55_575 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CH55_575 IPR029479 Nitroreductase CH55_576 IPR002142 Peptidase S49 CH55_576 IPR004634 Peptidase S49, protease IV CH55_576 IPR004635 Peptidase S49, SppA CH55_576 IPR029045 ClpP/crotonase-like domain CH55_577 IPR006033 L-asparaginase, type I CH55_577 IPR006034 Asparaginase/glutaminase CH55_577 IPR020827 Asparaginase/glutaminase, active site 1 CH55_577 IPR027473 L-asparaginase, C-terminal domain CH55_577 IPR027474 L-asparaginase, N-terminal CH55_577 IPR027475 Asparaginase/glutaminase, active site 2 CH55_577 IPR036152 CH55_577 CH55_577 IPR037152 CH55_577 CH55_578 IPR000868 Isochorismatase-like CH55_578 IPR036380 CH55_578 CH55_579 IPR009749 Protein of unknown function DUF1315 CH55_58 IPR002023 NADH-quinone oxidoreductase subunit E-like CH55_58 IPR036249 CH55_58 CH55_580 IPR002579 Peptide methionine sulphoxide reductase MrsB CH55_580 IPR011057 Mss4-like CH55_581 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CH55_581 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CH55_581 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CH55_581 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CH55_581 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CH55_581 IPR036291 CH55_581 CH55_582 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CH55_582 IPR011013 Galactose mutarotase-like domain CH55_582 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CH55_582 IPR025532 Glucose-6-phosphate 1-epimerase CH55_583 IPR010583 MltA-interacting MipA CH55_584 IPR010650 PrkA C-terminal domain CH55_584 IPR013153 PrkA AAA domain CH55_584 IPR016230 Serine-protein kinase, PrkA CH55_584 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_585 IPR006698 Thermus phage phiYS40, Orf56 CH55_586 IPR000620 Drug/metabolite transporter CH55_587 IPR000847 Transcription regulator HTH, LysR CH55_587 IPR005119 LysR, substrate-binding CH55_587 IPR036388 CH55_587 CH55_587 IPR036390 CH55_587 CH55_588 IPR003829 Pirin, N-terminal domain CH55_588 IPR008778 Pirin, C-terminal domain CH55_588 IPR011051 RmlC-like cupin domain CH55_588 IPR012093 Pirin CH55_588 IPR014710 RmlC-like jelly roll fold CH55_589 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG CH55_589 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CH55_589 IPR005829 Sugar transporter, conserved site CH55_589 IPR011701 Major facilitator superfamily CH55_589 IPR036259 CH55_589 CH55_59 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CH55_59 IPR011537 NADH ubiquinone oxidoreductase, F subunit CH55_59 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CH55_59 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding CH55_59 IPR037207 CH55_59 CH55_59 IPR037225 CH55_59 CH55_590 IPR006076 FAD dependent oxidoreductase CH55_590 IPR023080 D-amino acid dehydrogenase small subunit, DadA CH55_590 IPR036188 CH55_590 CH55_591 IPR007390 Sporulation stage V, protein R CH55_592 IPR000524 Transcription regulator HTH, GntR CH55_592 IPR008920 Transcription regulator FadR/GntR, C-terminal CH55_592 IPR014178 Fatty acid response transcription factor FadR CH55_592 IPR028374 FadR, C-terminal domain CH55_592 IPR036388 CH55_592 CH55_592 IPR036390 CH55_592 CH55_593 IPR004671 Na+/H+ antiporter NhaB CH55_594 IPR003752 Disulphide bond formation protein DsbB/BdbC CH55_594 IPR022920 Disulphide bond formation protein DsbB CH55_594 IPR023380 Disulphide bond formation protein DsbB-like domain CH55_597 IPR000192 Aminotransferase class V domain CH55_597 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_597 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_597 IPR015424 Pyridoxal phosphate-dependent transferase CH55_597 IPR016454 Cysteine desulfurase, NifS CH55_598 IPR011701 Major facilitator superfamily CH55_598 IPR036259 CH55_598 CH55_599 IPR001207 Transposase, mutator type CH55_6 IPR002155 Thiolase CH55_6 IPR012806 Acetyl-CoA C-acyltransferase FadI CH55_6 IPR016039 Thiolase-like CH55_6 IPR020610 Thiolase, active site CH55_6 IPR020613 Thiolase, conserved site CH55_6 IPR020615 Thiolase, acyl-enzyme intermediate active site CH55_6 IPR020616 Thiolase, N-terminal CH55_6 IPR020617 Thiolase, C-terminal CH55_60 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CH55_60 IPR006656 Molybdopterin oxidoreductase CH55_60 IPR006657 Molydopterin dinucleotide-binding domain CH55_60 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CH55_60 IPR009010 Aspartate decarboxylase-like domain CH55_60 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CH55_60 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CH55_60 IPR036010 CH55_60 CH55_600 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CH55_603 IPR003961 Fibronectin, type III CH55_603 IPR013783 Immunoglobulin-like fold CH55_603 IPR015406 Domain of unknown function DUF1983 CH55_603 IPR032876 CH55_603 CH55_603 IPR036116 CH55_603 CH55_606 IPR010654 Bacteriophage lambda tail assembly I CH55_609 IPR003497 BRO N-terminal domain CH55_61 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CH55_61 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CH55_611 IPR005569 Arc-like DNA binding CH55_611 IPR010985 Ribbon-helix-helix CH55_611 IPR013321 Arc-type ribbon-helix-helix CH55_613 IPR000064 Endopeptidase, NLPC/P60 domain CH55_613 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain CH55_613 IPR028090 JAB domain, prokaryotic CH55_613 IPR038765 CH55_613 CH55_614 IPR006487 Bacteriophage lambda, GpL, minor tail CH55_615 IPR010265 Bacteriophage lambda, GpM, minor tail CH55_616 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CH55_616 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal CH55_617 IPR014915 Bacteriophage TLS, TfmB CH55_618 IPR014859 Protein of unknown function DUF1789 CH55_619 IPR003343 Bacterial Ig-like, group 2 CH55_619 IPR008964 Invasin/intimin cell-adhesion CH55_619 IPR014918 Bacteriophage T1, Orf41 CH55_62 IPR010226 NADH-quinone oxidoreductase, chain I CH55_62 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CH55_62 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CH55_620 IPR025395 Protein of unknown function DUF4128 CH55_625 IPR003343 Bacterial Ig-like, group 2 CH55_625 IPR008964 Invasin/intimin cell-adhesion CH55_627 IPR017029 Putative phage head morphogenesis protein CH55_628 IPR025129 Domain of unknown function DUF4055 CH55_63 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CH55_631 IPR001207 Transposase, mutator type CH55_633 IPR018738 Protein of unknown function DUF2280 CH55_635 IPR005039 Antirepressor protein, C-terminal CH55_637 IPR004929 Bacteriophage Rz lysis protein CH55_638 IPR002196 Glycoside hydrolase, family 24 CH55_638 IPR023346 Lysozyme-like domain CH55_64 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CH55_64 IPR039428 CH55_64 CH55_642 IPR003497 BRO N-terminal domain CH55_643 IPR010534 Bacteriophage 933W, GpQ CH55_644 IPR008713 Bacteriophage lambda NinG CH55_645 IPR008711 Recombinase NinB CH55_645 IPR036619 CH55_645 CH55_646 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CH55_646 IPR023095 Adenine-specific methyltransferase, domain 2 CH55_646 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_647 IPR009634 Bacteriophage 933W, Xis excisionase CH55_647 IPR038146 CH55_647 CH55_648 IPR002611 IstB-like ATP-binding protein CH55_648 IPR003593 AAA+ ATPase domain CH55_648 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_65 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CH55_65 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CH55_65 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CH55_65 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CH55_650 IPR001584 Integrase, catalytic core CH55_650 IPR006120 Resolvase, HTH domain CH55_650 IPR009057 Homeodomain-like CH55_650 IPR012337 Ribonuclease H-like domain CH55_651 IPR002104 Integrase, catalytic CH55_651 IPR010998 Integrase, Lambda-type, N-terminal CH55_651 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_651 IPR013762 Integrase-like, catalytic core CH55_651 IPR022000 Domain of unknown function (DUF3596) CH55_652 IPR005358 Putative zinc- or iron-chelating domain containing protein CH55_652 IPR008228 Uncharacterised conserved protein UCP006173 CH55_653 IPR011234 Fumarylacetoacetase, C-terminal-related CH55_653 IPR036663 CH55_653 CH55_654 IPR011970 Lytic murein transglycosylase CH55_654 IPR023346 Lysozyme-like domain CH55_654 IPR031304 CH55_654 CH55_656 IPR027354 YcgL domain CH55_656 IPR038068 CH55_656 CH55_657 IPR005526 Septum formation inhibitor MinC, C-terminal CH55_657 IPR007874 Septum formation inhibitor MinC, N-terminal CH55_657 IPR013033 Septum formation inhibitor MinC CH55_657 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CH55_657 IPR036145 CH55_657 CH55_657 IPR038061 CH55_657 CH55_658 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CH55_658 IPR010223 ATP binding protein MinD, bacterial-type CH55_658 IPR025501 ATP binding protein MinD CH55_658 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_659 IPR005527 Septum formation topological specificity factor MinE CH55_659 IPR036707 CH55_659 CH55_66 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CH55_66 IPR003918 NADH:ubiquinone oxidoreductase CH55_66 IPR010227 NADH-quinone oxidoreductase, chain M/4 CH55_660 IPR002121 HRDC domain CH55_660 IPR002562 3'-5' exonuclease domain CH55_660 IPR006292 Ribonuclease D CH55_660 IPR010997 HRDC-like CH55_660 IPR012337 Ribonuclease H-like domain CH55_660 IPR036397 CH55_660 CH55_661 IPR000873 AMP-dependent synthetase/ligase CH55_661 IPR020845 AMP-binding, conserved site CH55_661 IPR025110 AMP-binding enzyme C-terminal domain CH55_662 IPR004658 Outer membrane lipoprotein Slp CH55_663 IPR000905 Gcp-like domain CH55_663 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ CH55_664 IPR006555 ATP-dependent helicase, C-terminal CH55_664 IPR010614 DEAD2 CH55_664 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_664 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_665 IPR006175 YjgF/Yer057p/UK114 family CH55_665 IPR019897 YjgF-like protein, conserved site CH55_665 IPR035959 CH55_665 CH55_666 IPR000390 Small multidrug resistance protein family CH55_666 IPR023737 Spermidine export protein MdtI CH55_667 IPR000390 Small multidrug resistance protein family CH55_667 IPR023740 Spermidine export protein MdtJ CH55_668 IPR000887 KDPG/KHG aldolase CH55_668 IPR013785 Aldolase-type TIM barrel CH55_668 IPR031337 CH55_668 CH55_668 IPR031338 CH55_668 CH55_67 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CH55_67 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CH55_670 IPR001282 Glucose-6-phosphate dehydrogenase CH55_670 IPR019796 Glucose-6-phosphate dehydrogenase, active site CH55_670 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CH55_670 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CH55_670 IPR036291 CH55_670 CH55_671 IPR000281 Helix-turn-helix protein RpiR CH55_671 IPR001347 Sugar isomerase (SIS) CH55_671 IPR009057 Homeodomain-like CH55_671 IPR036388 CH55_671 CH55_672 IPR001697 Pyruvate kinase CH55_672 IPR011037 Pyruvate kinase-like, insert domain CH55_672 IPR015793 Pyruvate kinase, barrel CH55_672 IPR015795 Pyruvate kinase, C-terminal CH55_672 IPR015806 Pyruvate kinase, beta-barrel insert domain CH55_672 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_672 IPR018209 Pyruvate kinase, active site CH55_672 IPR036918 CH55_672 CH55_673 IPR004960 Bacterial lipid A biosynthesis acyltransferase CH55_673 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase CH55_674 IPR007340 Opacity-associated protein A CH55_674 IPR011055 Duplicated hybrid motif CH55_674 IPR013731 Opacity-associated protein A, N-terminal CH55_674 IPR016047 Peptidase M23 CH55_674 IPR018392 LysM domain CH55_675 IPR006127 Periplasmic solute binding protein family CH55_676 IPR003439 ABC transporter-like CH55_676 IPR003593 AAA+ ATPase domain CH55_676 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_677 IPR001626 ABC-3 CH55_677 IPR037294 CH55_677 CH55_678 IPR003593 AAA+ ATPase domain CH55_678 IPR004605 DNA helicase, Holliday junction RuvB type CH55_678 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal CH55_678 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal CH55_678 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_678 IPR036388 CH55_678 CH55_678 IPR036390 CH55_678 CH55_679 IPR000085 Bacterial DNA recombination protein RuvA CH55_679 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CH55_679 IPR010994 RuvA domain 2-like CH55_679 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal CH55_679 IPR012340 Nucleic acid-binding, OB-fold CH55_679 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CH55_679 IPR036267 CH55_679 CH55_680 IPR002176 Crossover junction endodeoxyribonuclease RuvC CH55_680 IPR012337 Ribonuclease H-like domain CH55_680 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CH55_680 IPR036397 CH55_680 CH55_681 IPR002876 Transcriptional regulator TACO1-like CH55_681 IPR017856 Integrase, N-terminal zinc-binding domain-like CH55_681 IPR026564 Transcriptional regulator TACO1-like, domain 3 CH55_681 IPR029072 YebC-like CH55_682 IPR000086 NUDIX hydrolase domain CH55_682 IPR003564 dATP pyrophosphohydrolase CH55_682 IPR015797 NUDIX hydrolase domain-like CH55_682 IPR020084 NUDIX hydrolase, conserved site CH55_683 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CH55_683 IPR004115 GAD-like domain CH55_683 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CH55_683 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CH55_683 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type CH55_683 IPR012340 Nucleic acid-binding, OB-fold CH55_683 IPR029351 GAD domain CH55_684 IPR002763 Protein of unknown function DUF72 CH55_684 IPR036520 CH55_684 CH55_685 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CH55_685 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CH55_686 IPR005271 tRNA (cmo5U34)-methyltransferase CH55_686 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_687 IPR010017 tRNA (mo5U34)-methyltransferase CH55_687 IPR027555 tRNA (mo5U34)-methyltransferase-like CH55_687 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_688 IPR023648 Copper homeostasis CutC domain CH55_688 IPR036822 CH55_688 CH55_689 IPR010393 Protein of unknown function DUF991 CH55_689 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CH55_69 IPR004375 Conserved hypothetical protein CHP00022 CH55_69 IPR037012 CH55_69 CH55_690 IPR001278 Arginine-tRNA ligase CH55_690 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CH55_690 IPR005148 Arginyl tRNA synthetase N-terminal domain CH55_690 IPR008909 DALR anticodon binding CH55_690 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CH55_690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_690 IPR035684 CH55_690 CH55_690 IPR036695 CH55_690 CH55_691 IPR025157 Haemagluttinin repeat CH55_692 IPR008638 Filamentous haemagglutinin, N-terminal CH55_692 IPR011050 Pectin lyase fold/virulence factor CH55_692 IPR012334 Pectin lyase fold CH55_692 IPR025157 Haemagluttinin repeat CH55_693 IPR005565 Haemolysin activator HlyB CH55_693 IPR013686 Polypeptide-transport-associated, ShlB-type CH55_693 IPR027282 Two partner secretion pathway transporter CH55_693 IPR035251 CH55_693 CH55_694 IPR004268 Flagellin assembly, membrane protein MviN CH55_695 IPR000683 Oxidoreductase, N-terminal CH55_695 IPR036291 CH55_695 CH55_696 IPR007432 Protein of unknown function DUF480 CH55_696 IPR036388 CH55_696 CH55_696 IPR036390 CH55_696 CH55_697 IPR000182 GNAT domain CH55_697 IPR016181 Acyl-CoA N-acyltransferase CH55_698 IPR011701 Major facilitator superfamily CH55_698 IPR022855 Multidrug resistance protein MdtH CH55_698 IPR036259 CH55_698 CH55_699 IPR010835 Protein of unknown function DUF1439 CH55_7 IPR001753 Crotonase superfamily CH55_7 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CH55_7 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CH55_7 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CH55_7 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_7 IPR012802 Fatty oxidation complex, alpha subunit FadJ CH55_7 IPR029045 ClpP/crotonase-like domain CH55_7 IPR036291 CH55_7 CH55_70 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CH55_70 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_70 IPR031322 CH55_70 CH55_700 IPR020945 DMSO/Nitrate reductase chaperone CH55_700 IPR026269 Tat proofreading chaperone DmsD-type CH55_700 IPR036411 CH55_700 CH55_701 IPR003141 Polymerase/histidinol phosphatase, N-terminal CH55_701 IPR004013 PHP, C-terminal CH55_701 IPR016195 Polymerase/histidinol phosphatase-like CH55_701 IPR023710 Probable phosphatase YcdX CH55_703 IPR000600 ROK CH55_703 IPR036388 CH55_703 CH55_703 IPR036390 CH55_703 CH55_704 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CH55_704 IPR030395 CH55_704 CH55_705 IPR003439 ABC transporter-like CH55_705 IPR003593 AAA+ ATPase domain CH55_705 IPR017871 ABC transporter, conserved site CH55_705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_706 IPR000515 MetI-like domain CH55_706 IPR035906 CH55_706 CH55_707 IPR000515 MetI-like domain CH55_707 IPR035906 CH55_707 CH55_708 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_709 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CH55_709 IPR030395 CH55_709 CH55_71 IPR002347 Glucose/ribitol dehydrogenase CH55_71 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_71 IPR036291 CH55_71 CH55_712 IPR001902 Sulphate anion transporter CH55_712 IPR002645 STAS domain CH55_712 IPR011547 Sulphate transporter CH55_712 IPR018045 Sulphate anion transporter, conserved site CH55_712 IPR036513 CH55_712 CH55_713 IPR006218 DAHP synthetase I/KDSA CH55_713 IPR006269 3-deoxy-8-phosphooctulonate synthase CH55_713 IPR013785 Aldolase-type TIM barrel CH55_714 IPR011990 Tetratricopeptide-like helical domain CH55_714 IPR032698 CH55_714 CH55_715 IPR007360 Invasion gene expression up-regulator, SirB CH55_716 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CH55_716 IPR004556 Modification methylase HemK CH55_716 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CH55_716 IPR025714 Methyltransferase domain CH55_716 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_717 IPR000352 Peptide chain release factor class I/class II CH55_717 IPR004373 Peptide chain release factor 1 CH55_717 IPR005139 Peptide chain release factor CH55_718 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CH55_718 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CH55_718 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CH55_718 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CH55_718 IPR018214 Glutamyl-tRNA reductase, conserved site CH55_718 IPR036291 CH55_718 CH55_718 IPR036343 CH55_718 CH55_718 IPR036453 CH55_718 CH55_719 IPR004565 Outer membrane lipoprotein LolB CH55_719 IPR029046 Lipoprotein localisation LolA/LolB/LppX CH55_72 IPR003790 Protein of unknown function DUF187 CH55_72 IPR013785 Aldolase-type TIM barrel CH55_72 IPR017853 Glycoside hydrolase, superfamily CH55_720 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CH55_720 IPR006204 GHMP kinase N-terminal domain CH55_720 IPR013750 GHMP kinase, C-terminal domain CH55_720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CH55_720 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_720 IPR036554 CH55_720 CH55_721 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CH55_721 IPR005946 Ribose-phosphate diphosphokinase CH55_721 IPR029057 Phosphoribosyltransferase-like CH55_721 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CH55_721 IPR037515 CH55_721 CH55_722 IPR019698 Protein of unknown function DUF2583 CH55_723 IPR001328 Peptidyl-tRNA hydrolase CH55_723 IPR018171 Peptidyl-tRNA hydrolase, conserved site CH55_723 IPR036416 CH55_723 CH55_724 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CH55_724 IPR006073 GTP binding domain CH55_724 IPR012675 Beta-grasp domain CH55_724 IPR012676 TGS-like CH55_724 IPR013029 Domain of unknown function DUF933 CH55_724 IPR023192 TGS-like domain CH55_724 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_726 IPR001584 Integrase, catalytic core CH55_726 IPR012337 Ribonuclease H-like domain CH55_726 IPR036397 CH55_726 CH55_727 IPR001763 Rhodanese-like domain CH55_727 IPR036873 CH55_727 CH55_728 IPR013094 Alpha/beta hydrolase fold-3 CH55_728 IPR029058 Alpha/Beta hydrolase fold CH55_729 IPR028082 Periplasmic binding protein-like I CH55_73 IPR000843 Transcription regulator HTH, LacI CH55_73 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH55_73 IPR010982 Lambda repressor-like, DNA-binding domain CH55_73 IPR028082 Periplasmic binding protein-like I CH55_730 IPR025145 Protein of unknown function DUF4087 CH55_731 IPR016174 Di-haem cytochrome, transmembrane CH55_731 IPR025517 Domain of unknown function DUF4405 CH55_732 IPR008254 Flavodoxin/nitric oxide synthase CH55_732 IPR029039 Flavoprotein-like CH55_733 IPR002925 Dienelactone hydrolase CH55_733 IPR029058 Alpha/Beta hydrolase fold CH55_734 IPR001789 Signal transduction response regulator, receiver domain CH55_734 IPR001867 Signal transduction response regulator, C-terminal CH55_734 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CH55_734 IPR011006 CheY-like superfamily CH55_734 IPR016032 Signal transduction response regulator, C-terminal effector CH55_734 IPR036388 CH55_734 CH55_735 IPR003594 Histidine kinase-like ATPase, C-terminal domain CH55_735 IPR003660 HAMP linker domain CH55_735 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CH55_735 IPR006290 Heavy metal sensor kinase CH55_735 IPR036097 CH55_735 CH55_735 IPR036890 CH55_735 CH55_736 IPR003779 Carboxymuconolactone decarboxylase-like CH55_736 IPR029032 AhpD-like CH55_737 IPR011051 RmlC-like cupin domain CH55_737 IPR013096 Cupin 2, conserved barrel CH55_737 IPR014710 RmlC-like jelly roll fold CH55_738 IPR000073 Alpha/beta hydrolase fold-1 CH55_738 IPR029058 Alpha/Beta hydrolase fold CH55_739 IPR011989 Armadillo-like helical CH55_739 IPR016024 Armadillo-type fold CH55_74 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH55_74 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CH55_74 IPR036291 CH55_74 CH55_740 IPR011051 RmlC-like cupin domain CH55_741 IPR011051 RmlC-like cupin domain CH55_743 IPR002347 Glucose/ribitol dehydrogenase CH55_743 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_743 IPR036291 CH55_743 CH55_744 IPR013217 Methyltransferase type 12 CH55_744 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted CH55_744 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_745 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CH55_745 IPR022133 Ribose-5-phosphate isomerase, C-terminal CH55_745 IPR036569 CH55_745 CH55_746 IPR006597 Sel1-like CH55_746 IPR025115 Domain of unknown function DUF4034 CH55_748 IPR006597 Sel1-like CH55_748 IPR011652 MORN variant CH55_748 IPR011990 Tetratricopeptide-like helical domain CH55_749 IPR001207 Transposase, mutator type CH55_75 IPR011701 Major facilitator superfamily CH55_75 IPR036259 CH55_75 CH55_750 IPR001207 Transposase, mutator type CH55_751 IPR001207 Transposase, mutator type CH55_754 IPR007235 Glycosyl transferase, family 28, C-terminal CH55_756 IPR025993 Ceramide glucosyltransferase CH55_756 IPR029044 Nucleotide-diphospho-sugar transferases CH55_757 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_757 IPR036291 CH55_757 CH55_758 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related CH55_759 IPR001279 Beta-lactamase-like CH55_759 IPR036866 CH55_759 CH55_76 IPR005624 Domain of unknown function DUF336 CH55_76 IPR010371 Uncharacterised protein family UPF0303 CH55_76 IPR038084 CH55_76 CH55_760 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_760 IPR036291 CH55_760 CH55_761 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CH55_761 IPR016039 Thiolase-like CH55_762 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH55_762 IPR016039 Thiolase-like CH55_763 IPR005801 ADC synthase CH55_763 IPR015890 Chorismate binding, C-terminal CH55_764 IPR010282 Uncharacterised protein family HutD/Ves CH55_764 IPR011051 RmlC-like cupin domain CH55_764 IPR014710 RmlC-like jelly roll fold CH55_765 IPR006680 Amidohydrolase 1 CH55_765 IPR010252 Formiminoglutamate deiminase CH55_765 IPR011059 Metal-dependent hydrolase, composite domain CH55_765 IPR032466 CH55_765 CH55_766 IPR000524 Transcription regulator HTH, GntR CH55_766 IPR010248 Histidine utilization repressor CH55_766 IPR011663 UbiC transcription regulator-associated CH55_766 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CH55_766 IPR036388 CH55_766 CH55_766 IPR036390 CH55_766 CH55_767 IPR005920 Imidazolonepropionase CH55_767 IPR006680 Amidohydrolase 1 CH55_767 IPR011059 Metal-dependent hydrolase, composite domain CH55_767 IPR032466 CH55_767 CH55_768 IPR007709 N-formylglutamate amidohydrolase CH55_768 IPR010247 N-formylglutamate deformylase CH55_77 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CH55_77 IPR004786 6-phosphogluconate dehydratase CH55_77 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CH55_77 IPR037237 CH55_77 CH55_770 IPR001270 ClpA/B family CH55_770 IPR002611 IstB-like ATP-binding protein CH55_770 IPR003593 AAA+ ATPase domain CH55_770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_770 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_771 IPR001584 Integrase, catalytic core CH55_771 IPR006120 Resolvase, HTH domain CH55_771 IPR009057 Homeodomain-like CH55_771 IPR012337 Ribonuclease H-like domain CH55_773 IPR008995 Molybdate/tungstate binding, C-terminal CH55_773 IPR013611 Transport-associated OB, type 2 CH55_774 IPR003439 ABC transporter-like CH55_774 IPR003593 AAA+ ATPase domain CH55_774 IPR017871 ABC transporter, conserved site CH55_774 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_775 IPR000515 MetI-like domain CH55_775 IPR035906 CH55_775 CH55_776 IPR000515 MetI-like domain CH55_776 IPR035906 CH55_776 CH55_777 IPR006059 Bacterial extracellular solute-binding, family 1 CH55_778 IPR000683 Oxidoreductase, N-terminal CH55_778 IPR036291 CH55_778 CH55_779 IPR000524 Transcription regulator HTH, GntR CH55_779 IPR011663 UbiC transcription regulator-associated CH55_779 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CH55_779 IPR036388 CH55_779 CH55_779 IPR036390 CH55_779 CH55_785 IPR001207 Transposase, mutator type CH55_786 IPR001207 Transposase, mutator type CH55_787 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain CH55_787 IPR035897 CH55_787 CH55_788 IPR025528 Protein of unknown function DUF4415 CH55_789 IPR007460 Burkholderia phage Bups phi1, Orf7.3 CH55_789 IPR038573 CH55_789 CH55_79 IPR010279 Protein of unknown function DUF883, ElaB CH55_790 IPR006531 Gp5 N-terminal CH55_790 IPR013046 Bacteriophage Mu/P2, baseplate assembly CH55_790 IPR037026 CH55_790 CH55_791 IPR007048 GpW/Gp25/anti-adapter protein IraD CH55_793 IPR021225 Protein of unknown function DUF2778 CH55_796 IPR002514 Transposase IS3/IS911family CH55_797 IPR001584 Integrase, catalytic core CH55_797 IPR012337 Ribonuclease H-like domain CH55_797 IPR036397 CH55_797 CH55_798 IPR008514 Type VI secretion system effector, Hcp CH55_798 IPR036624 CH55_798 CH55_8 IPR004449 Phosphohistidine phosphatase SixA, subgroup CH55_8 IPR013078 Histidine phosphatase superfamily, clade-1 CH55_8 IPR029033 Histidine phosphatase superfamily CH55_803 IPR007694 DNA helicase, DnaB-like, C-terminal CH55_804 IPR011010 DNA breaking-rejoining enzyme, catalytic core CH55_804 IPR013762 Integrase-like, catalytic core CH55_808 IPR000462 CDP-alcohol phosphatidyltransferase CH55_808 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CH55_808 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CH55_809 IPR000305 GIY-YIG nuclease superfamily CH55_809 IPR001162 UvrC family homology region CH55_809 IPR001943 UVR domain CH55_809 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CH55_809 IPR004791 UvrABC system, subunit C CH55_809 IPR010994 RuvA domain 2-like CH55_809 IPR035901 CH55_809 CH55_809 IPR036876 CH55_809 CH55_809 IPR038476 CH55_809 CH55_81 IPR004561 Isochorismate synthase CH55_81 IPR005801 ADC synthase CH55_81 IPR015890 Chorismate binding, C-terminal CH55_81 IPR034681 CH55_81 CH55_810 IPR000792 Transcription regulator LuxR, C-terminal CH55_810 IPR001789 Signal transduction response regulator, receiver domain CH55_810 IPR011006 CheY-like superfamily CH55_810 IPR016032 Signal transduction response regulator, C-terminal effector CH55_812 IPR009707 GlpM CH55_814 IPR000758 Virulence-related outer membrane protein CH55_814 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_814 IPR027385 Outer membrane protein beta-barrel CH55_816 IPR002293 Amino acid/polyamine transporter I CH55_816 IPR004840 Amino acid permease, conserved site CH55_816 IPR004841 Amino acid permease/ SLC12A domain CH55_817 IPR006652 Kelch repeat type 1 CH55_817 IPR015915 Kelch-type beta propeller CH55_817 IPR019936 Mutatrotase, YjhT-like CH55_818 IPR005025 NADPH-dependent FMN reductase-like CH55_818 IPR010089 Flavoprotein WrbA CH55_818 IPR029039 Flavoprotein-like CH55_818 IPR037513 CH55_818 CH55_819 IPR006313 Deferrochelatase/peroxidase EfeB CH55_819 IPR006314 Dyp-type peroxidase CH55_819 IPR011008 Dimeric alpha-beta barrel CH55_820 IPR008972 Cupredoxin CH55_820 IPR018976 CH55_820 CH55_820 IPR028096 EfeO-type cupredoxin-like domain CH55_820 IPR038352 CH55_820 CH55_821 IPR004923 Iron permease FTR1/Fip1/EfeU CH55_822 IPR001734 Sodium/solute symporter CH55_822 IPR011851 Sodium/proline symporter CH55_822 IPR018212 Sodium/solute symporter, conserved site CH55_822 IPR038377 CH55_822 CH55_824 IPR002872 Proline dehydrogenase domain CH55_824 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CH55_824 IPR010985 Ribbon-helix-helix CH55_824 IPR013321 Arc-type ribbon-helix-helix CH55_824 IPR015590 Aldehyde dehydrogenase domain CH55_824 IPR016160 Aldehyde dehydrogenase, cysteine active site CH55_824 IPR016161 Aldehyde/histidinol dehydrogenase CH55_824 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_824 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_824 IPR024082 Proline dehydrogenase PutA, domain II CH55_824 IPR024089 Proline dehydrogenase PutA, domain I/II CH55_824 IPR024090 Proline dehydrogenase PutA, domain I CH55_824 IPR025703 Bifunctional protein PutA CH55_824 IPR029041 FAD-linked oxidoreductase-like CH55_824 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CH55_826 IPR036388 CH55_826 CH55_826 IPR036390 CH55_826 CH55_827 IPR003439 ABC transporter-like CH55_827 IPR003593 AAA+ ATPase domain CH55_827 IPR017871 ABC transporter, conserved site CH55_827 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_827 IPR030679 CH55_827 CH55_828 IPR000515 MetI-like domain CH55_828 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_828 IPR035906 CH55_828 CH55_829 IPR001320 Ionotropic glutamate receptor CH55_829 IPR001638 Extracellular solute-binding protein, family 3 CH55_829 IPR018313 Extracellular solute-binding protein, family 3, conserved site CH55_83 IPR004433 Menaquinone biosynthesis protein MenD CH55_83 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CH55_83 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CH55_83 IPR029061 Thiamin diphosphate-binding fold CH55_83 IPR032264 CH55_83 CH55_830 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CH55_830 IPR005966 D-cysteine desulfhydrase CH55_830 IPR023702 D-cysteine desulphhydrase, bacterial CH55_830 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CH55_830 IPR036052 CH55_830 CH55_831 IPR004107 Integrase, SAM-like, N-terminal CH55_831 IPR022523 Flagellar regulator, FliZ CH55_832 IPR000943 RNA polymerase sigma-70 CH55_832 IPR007624 RNA polymerase sigma-70 region 3 CH55_832 IPR007627 RNA polymerase sigma-70 region 2 CH55_832 IPR007630 RNA polymerase sigma-70 region 4 CH55_832 IPR012845 RNA polymerase sigma factor, FliA/WhiG CH55_832 IPR013324 RNA polymerase sigma factor, region 3/4 CH55_832 IPR013325 RNA polymerase sigma factor, region 2 CH55_832 IPR014284 RNA polymerase sigma-70 like domain CH55_832 IPR028617 RNA polymerase sigma factor FliA CH55_833 IPR001029 Flagellin, D0/D1 domain CH55_833 IPR001492 Flagellin CH55_834 IPR003481 Flagellar hook-associated protein 2, N-terminal CH55_834 IPR010809 Flagellar hook-associated 2, C-terminal CH55_834 IPR010810 Flagellin hook, IN motif CH55_835 IPR003713 Flagellar protein FliS CH55_835 IPR036584 CH55_835 CH55_836 IPR008622 Flagellar protein FliT CH55_837 IPR009057 Homeodomain-like CH55_837 IPR018060 DNA binding HTH domain, AraC-type CH55_837 IPR020449 Transcription regulator HTH, AraC- type CH55_837 IPR037923 CH55_837 CH55_839 IPR029016 GAF domain-like CH55_84 IPR000073 Alpha/beta hydrolase fold-1 CH55_84 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CH55_84 IPR029058 Alpha/Beta hydrolase fold CH55_841 IPR003265 HhH-GPD domain CH55_841 IPR011257 DNA glycosylase CH55_842 IPR003812 Fido domain CH55_842 IPR006440 Death on curing protein CH55_844 IPR001624 Flagellar hook-basal body complex protein FliE CH55_845 IPR000067 Flagellar M-ring protein FliF CH55_845 IPR006182 Secretory protein YscJ/FliF CH55_845 IPR013556 Flagellar M-ring C-terminal CH55_846 IPR000090 Flagellar motor switch protein FliG CH55_846 IPR011002 Flagellar motor switch protein FliG, alpha-helical CH55_846 IPR023087 CH55_846 CH55_846 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CH55_846 IPR032779 CH55_846 CH55_847 IPR000563 Flagellar assembly protein FliH CH55_847 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CH55_848 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CH55_848 IPR003593 AAA+ ATPase domain CH55_848 IPR005714 ATPase, type III secretion system, FliI/YscN CH55_848 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CH55_848 IPR020005 Flagellar export ATPase FliI, clade 1 CH55_848 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_849 IPR012823 Flagellar export FliJ CH55_849 IPR018006 Flagellar FliJ, proteobacteria CH55_85 IPR001753 Crotonase superfamily CH55_85 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase CH55_85 IPR014748 Crontonase, C-terminal CH55_85 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CH55_85 IPR029045 ClpP/crotonase-like domain CH55_850 IPR001635 Flagellar hook-length control protein FliK CH55_850 IPR021136 Flagellar hook-length control protein-like, C-terminal CH55_850 IPR038610 CH55_850 CH55_851 IPR005503 Flagellar basal body-associated protein FliL CH55_852 IPR001543 Surface presentation of antigen (SpoA) CH55_852 IPR001689 Flagellar motor switch protein FliM CH55_852 IPR028976 CheC-like domain CH55_852 IPR036429 CH55_852 CH55_853 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CH55_853 IPR001543 Surface presentation of antigen (SpoA) CH55_853 IPR012826 Flagellar motor switch FliN CH55_853 IPR031576 CH55_853 CH55_853 IPR036429 CH55_853 CH55_854 IPR022781 Flagellar biosynthesis protein, FliO CH55_855 IPR005837 Flagellar transport protein FliP CH55_855 IPR005838 Type III secretion system inner membrane P protein CH55_856 IPR002191 Bacterial export protein family 3 CH55_856 IPR006305 Flagellar biosynthesis protein FliQ CH55_857 IPR002010 Type III secretion system inner membrane R protein CH55_857 IPR006303 Flagellar biosynthesis protein FliR CH55_858 IPR012933 HicA mRNA interferase family CH55_858 IPR038570 CH55_858 CH55_859 IPR031807 CH55_859 CH55_859 IPR035069 CH55_859 CH55_86 IPR010196 O-succinylbenzoic acid (OSB) synthetase CH55_86 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH55_86 IPR029017 Enolase N-terminal domain-like CH55_86 IPR029065 Enolase C-terminal domain-like CH55_86 IPR036849 CH55_86 CH55_860 IPR011611 Carbohydrate kinase PfkB CH55_860 IPR029056 Ribokinase-like CH55_861 IPR001851 ABC transporter, permease CH55_862 IPR001851 ABC transporter, permease CH55_863 IPR003439 ABC transporter-like CH55_863 IPR003593 AAA+ ATPase domain CH55_863 IPR017871 ABC transporter, conserved site CH55_863 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_864 IPR025997 Periplasmic binding protein domain CH55_864 IPR028082 Periplasmic binding protein-like I CH55_865 IPR001851 ABC transporter, permease CH55_866 IPR001303 Class II aldolase/adducin N-terminal CH55_866 IPR002347 Glucose/ribitol dehydrogenase CH55_866 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_866 IPR036291 CH55_866 CH55_866 IPR036409 CH55_866 CH55_867 IPR007324 Sugar-binding domain, putative CH55_867 IPR013324 RNA polymerase sigma factor, region 3/4 CH55_867 IPR037171 CH55_867 CH55_868 IPR001029 Flagellin, D0/D1 domain CH55_868 IPR013384 Flagellar hook-associated protein 3 CH55_869 IPR001444 Flagellar basal body rod protein, N-terminal CH55_869 IPR002371 Flagellar hook-associated protein, FlgK CH55_869 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_87 IPR000873 AMP-dependent synthetase/ligase CH55_87 IPR010192 2-succinylbenzoate--CoA ligase CH55_87 IPR020845 AMP-binding, conserved site CH55_870 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CH55_870 IPR013377 Flagellar rod assembly protein/muramidase FlgJ CH55_870 IPR019301 Flagellar protein FlgJ, N-terminal CH55_871 IPR001782 Flagellar P-ring protein CH55_872 IPR000527 Flagellar L-ring protein CH55_873 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_873 IPR012834 Flagellar basal-body rod FlgG CH55_873 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CH55_873 IPR037925 CH55_873 CH55_874 IPR001444 Flagellar basal body rod protein, N-terminal CH55_874 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CH55_874 IPR037925 CH55_874 CH55_875 IPR001444 Flagellar basal body rod protein, N-terminal CH55_875 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_875 IPR011491 Flagellar basal body FlaE CH55_875 IPR019776 Flagellar basal body rod protein, conserved site CH55_875 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CH55_875 IPR037058 CH55_875 CH55_875 IPR037925 CH55_875 CH55_876 IPR005648 Flagellar hook capping protein CH55_876 IPR025963 FlgD Tudor-like domain CH55_876 IPR025965 FlgD Ig-like domain CH55_877 IPR001444 Flagellar basal body rod protein, N-terminal CH55_877 IPR006299 Flagellar basal-body rod protein FlgC CH55_877 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CH55_877 IPR019776 Flagellar basal body rod protein, conserved site CH55_878 IPR001444 Flagellar basal body rod protein, N-terminal CH55_878 IPR006300 Flagellar basal-body rod protein FlgB CH55_878 IPR019776 Flagellar basal body rod protein, conserved site CH55_879 IPR013974 SAF domain CH55_879 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CH55_88 IPR000312 Glycosyl transferase, family 3 CH55_88 IPR017459 Glycosyl transferase family 3, N-terminal domain CH55_88 IPR035902 CH55_88 CH55_88 IPR036320 CH55_88 CH55_880 IPR007412 Anti-sigma-28 factor, FlgM CH55_880 IPR031316 CH55_880 CH55_880 IPR035890 CH55_880 CH55_881 IPR007809 FlgN-like domain CH55_881 IPR036679 CH55_881 CH55_882 IPR003344 Bacterial Ig-like, group 1 CH55_882 IPR008964 Invasin/intimin cell-adhesion CH55_882 IPR013117 Intimin, C-terminal CH55_882 IPR013783 Immunoglobulin-like fold CH55_882 IPR015217 Invasin, domain 3 CH55_882 IPR016186 C-type lectin-like CH55_882 IPR016187 C-type lectin fold CH55_882 IPR024519 Domain of unknown function DUF3442, intimin/invasin CH55_882 IPR038177 CH55_882 CH55_883 IPR002686 Transposase IS200-like CH55_883 IPR036515 CH55_883 CH55_884 IPR003535 Intimin/invasin bacterial adhesion mediator protein CH55_884 IPR024519 Domain of unknown function DUF3442, intimin/invasin CH55_884 IPR038177 CH55_884 CH55_885 IPR009420 Flagellar FlhE CH55_886 IPR001712 Type III secretion system FHIPEP CH55_886 IPR006301 Flagellar biosynthesis protein FlhA CH55_886 IPR025505 FHIPEP conserved site CH55_887 IPR006135 Type III secretion system substrate exporter CH55_887 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB CH55_887 IPR029025 Type III secretion system substrate exporter, C-terminal CH55_889 IPR010862 Protein of unknown function DUF1493 CH55_89 IPR010854 Domain of unknown function DUF1471 CH55_89 IPR025543 Dodecin-like CH55_89 IPR036275 CH55_89 CH55_890 IPR019648 Protein of unknown function DUF2511 CH55_891 IPR008457 Copper resistance D CH55_892 IPR007348 CopC domain CH55_892 IPR014756 Immunoglobulin E-set CH55_893 IPR008331 Ferritin/DPS protein domain CH55_893 IPR009078 Ferritin-like superfamily CH55_893 IPR012347 Ferritin-related CH55_894 IPR009052 DNA polymerase III-theta, bacterial CH55_894 IPR036745 CH55_894 CH55_895 IPR000073 Alpha/beta hydrolase fold-1 CH55_895 IPR005944 Proline iminopeptidase CH55_895 IPR029058 Alpha/Beta hydrolase fold CH55_896 IPR029058 Alpha/Beta hydrolase fold CH55_897 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CH55_897 IPR002470 Peptidase S9A, prolyl oligopeptidase CH55_897 IPR023302 Peptidase S9A, N-terminal domain CH55_897 IPR029058 Alpha/Beta hydrolase fold CH55_898 IPR020236 Uncharacterised protein family YebF CH55_898 IPR025603 YebF/Colicin-M immunity protein CH55_898 IPR038703 CH55_898 CH55_899 IPR007374 ASCH domain CH55_899 IPR008314 Uncharacterised conserved protein UCP029143 CH55_899 IPR015947 PUA-like domain CH55_9 IPR002625 Smr protein/MutS2 C-terminal CH55_9 IPR022990 Uncharacterised protein family UPF0115 CH55_9 IPR036063 CH55_9 CH55_90 IPR010286 Ribosomal RNA large subunit methyltransferase F-like CH55_90 IPR016909 Ribosomal RNA large subunit methyltransferase F CH55_90 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_900 IPR009813 Uncharacterised protein family YebG CH55_900 IPR038627 CH55_900 CH55_901 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CH55_901 IPR001650 Helicase, C-terminal CH55_901 IPR005580 DbpA, RNA-binding CH55_901 IPR011545 DEAD/DEAH box helicase domain CH55_901 IPR012677 Nucleotide-binding, alpha-beta plait CH55_901 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CH55_901 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_901 IPR028619 ATP-dependent RNA helicase DbpA CH55_902 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CH55_902 IPR005862 Phosphoribosylglycinamide formyltransferase 2 CH55_902 IPR011054 Rudiment single hybrid motif CH55_902 IPR013815 ATP-grasp fold, subdomain 1 CH55_902 IPR016185 Pre-ATP-grasp domain CH55_903 IPR005371 Uncharacterised protein family UPF0181 CH55_904 IPR005801 ADC synthase CH55_904 IPR005802 Para-aminobenzoate synthase, component I CH55_904 IPR006805 Anthranilate synthase component I, N-terminal CH55_904 IPR015890 Chorismate binding, C-terminal CH55_904 IPR019999 Anthranilate synthase component I - like CH55_905 IPR000059 NUDIX hydrolase, NudL, conserved site CH55_905 IPR000086 NUDIX hydrolase domain CH55_905 IPR015797 NUDIX hydrolase domain-like CH55_905 IPR023735 Uncharacterised nudix hydrolase NudL CH55_906 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CH55_906 IPR005130 Serine dehydratase-like, alpha subunit CH55_906 IPR005131 Serine dehydratase beta chain CH55_906 IPR029009 Allosteric substrate binding domain CH55_907 IPR002563 Flavin reductase-like, FMN-binding CH55_907 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component CH55_907 IPR012349 FMN-binding split barrel CH55_908 IPR004925 HpaB/PvcC/4-BUDH CH55_908 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CH55_908 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria CH55_908 IPR024674 HpaB/PvcC/4-BUDH N-terminal CH55_908 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein CH55_908 IPR024719 HpaB/PvcC/4-BUDH C-terminal CH55_908 IPR036250 CH55_908 CH55_909 IPR011701 Major facilitator superfamily CH55_909 IPR024671 Autophagy-related protein 22-like CH55_909 IPR036259 CH55_909 CH55_91 IPR001270 ClpA/B family CH55_91 IPR002611 IstB-like ATP-binding protein CH55_91 IPR003593 AAA+ ATPase domain CH55_91 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_91 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_910 IPR011701 Major facilitator superfamily CH55_910 IPR036259 CH55_910 CH55_911 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CH55_911 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase CH55_911 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CH55_912 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase CH55_912 IPR036663 CH55_912 CH55_913 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase CH55_913 IPR014347 Tautomerase/MIF superfamily CH55_914 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CH55_914 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe CH55_915 IPR015590 Aldehyde dehydrogenase domain CH55_915 IPR016160 Aldehyde dehydrogenase, cysteine active site CH55_915 IPR016161 Aldehyde/histidinol dehydrogenase CH55_915 IPR016162 Aldehyde dehydrogenase, N-terminal CH55_915 IPR016163 Aldehyde dehydrogenase, C-terminal CH55_915 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CH55_916 IPR011234 Fumarylacetoacetase, C-terminal-related CH55_916 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit CH55_916 IPR036663 CH55_916 CH55_917 IPR011234 Fumarylacetoacetase, C-terminal-related CH55_917 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit CH55_917 IPR036663 CH55_917 CH55_918 IPR000835 MarR-type HTH domain CH55_918 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR CH55_918 IPR036388 CH55_918 CH55_918 IPR036390 CH55_918 CH55_919 IPR000644 CBS domain CH55_919 IPR005170 Transporter-associated domain CH55_919 IPR005496 Integral membrane protein TerC CH55_919 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CH55_919 IPR036318 CH55_919 CH55_920 IPR004701 Phosphotransferase system, mannose-type IIA component CH55_920 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CH55_920 IPR013789 Phosphotransferase system, mannose family IIA component CH55_920 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CH55_920 IPR036662 CH55_920 CH55_920 IPR036667 CH55_920 CH55_921 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit CH55_922 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CH55_923 IPR009328 Protein of unknown function DUF986 CH55_924 IPR003810 Domain of unknown function DUF204 CH55_924 IPR022929 Putative manganese efflux pump MntP CH55_925 IPR000531 TonB-dependent receptor, beta-barrel CH55_925 IPR010105 TonB-dependent siderophore receptor CH55_925 IPR010916 TonB box, conserved site CH55_925 IPR010917 TonB-dependent receptor, conserved site CH55_925 IPR012910 TonB-dependent receptor, plug CH55_925 IPR036942 CH55_925 CH55_925 IPR037066 CH55_925 CH55_926 IPR000014 PAS domain CH55_926 IPR035965 CH55_926 CH55_927 IPR000014 PAS domain CH55_927 IPR000160 GGDEF domain CH55_927 IPR001610 PAC motif CH55_927 IPR013767 PAS fold CH55_927 IPR029787 Nucleotide cyclase CH55_927 IPR035965 CH55_927 CH55_929 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted CH55_929 IPR025714 Methyltransferase domain CH55_929 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CH55_93 IPR001584 Integrase, catalytic core CH55_93 IPR006120 Resolvase, HTH domain CH55_93 IPR009057 Homeodomain-like CH55_93 IPR012337 Ribonuclease H-like domain CH55_930 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CH55_930 IPR011324 Cytotoxic necrotizing factor-like, catalytic CH55_930 IPR038371 CH55_930 CH55_931 IPR002059 Cold-shock protein, DNA-binding CH55_931 IPR011129 Cold shock protein CH55_931 IPR012156 Cold shock, CspA CH55_931 IPR012340 Nucleic acid-binding, OB-fold CH55_931 IPR019844 Cold-shock conserved site CH55_933 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP CH55_933 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CH55_934 IPR002293 Amino acid/polyamine transporter I CH55_934 IPR004840 Amino acid permease, conserved site CH55_934 IPR004841 Amino acid permease/ SLC12A domain CH55_935 IPR025135 Protein of unknown function DUF4060 CH55_936 IPR019701 Bacteriophage P22, NinX CH55_937 IPR025594 YebO-like protein CH55_938 IPR025611 YobH-like protein CH55_939 IPR020262 Uncharacterised protein family YecJ CH55_94 IPR000014 PAS domain CH55_94 IPR001610 PAC motif CH55_94 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CH55_94 IPR013656 PAS fold-4 CH55_94 IPR035965 CH55_94 CH55_941 IPR009057 Homeodomain-like CH55_941 IPR018060 DNA binding HTH domain, AraC-type CH55_941 IPR020449 Transcription regulator HTH, AraC- type CH55_943 IPR003439 ABC transporter-like CH55_943 IPR003593 AAA+ ATPase domain CH55_943 IPR011527 ABC transporter type 1, transmembrane domain CH55_943 IPR017871 ABC transporter, conserved site CH55_943 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_943 IPR036640 CH55_943 CH55_944 IPR000687 RIO kinase CH55_944 IPR011009 Protein kinase-like domain CH55_944 IPR018935 RIO kinase, conserved site CH55_945 IPR005545 YCII-related CH55_945 IPR011008 Dimeric alpha-beta barrel CH55_946 IPR010384 MtfA family CH55_946 IPR024079 Metallopeptidase, catalytic domain CH55_949 IPR001270 ClpA/B family CH55_949 IPR002611 IstB-like ATP-binding protein CH55_949 IPR003593 AAA+ ATPase domain CH55_949 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_949 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CH55_950 IPR001584 Integrase, catalytic core CH55_950 IPR006120 Resolvase, HTH domain CH55_950 IPR009057 Homeodomain-like CH55_950 IPR012337 Ribonuclease H-like domain CH55_951 IPR000843 Transcription regulator HTH, LacI CH55_951 IPR001761 Periplasmic binding protein/LacI sugar binding domain CH55_951 IPR010982 Lambda repressor-like, DNA-binding domain CH55_951 IPR028082 Periplasmic binding protein-like I CH55_952 IPR001207 Transposase, mutator type CH55_953 IPR000576 LacY/RafB permease family CH55_953 IPR036259 CH55_953 CH55_954 IPR000111 Glycoside hydrolase, clan GH-D CH55_954 IPR002252 Glycoside hydrolase, family 36 CH55_954 IPR013785 Aldolase-type TIM barrel CH55_954 IPR017853 Glycoside hydrolase, superfamily CH55_954 IPR031704 CH55_954 CH55_954 IPR038417 CH55_954 CH55_957 IPR003542 Enterobactin synthetase-like, component D CH55_957 IPR008278 4'-phosphopantetheinyl transferase superfamily CH55_957 IPR037143 CH55_957 CH55_958 IPR004682 TRAP dicarboxylate transporter CH55_958 IPR018389 Bacterial extracellular solute-binding protein, family 7 CH55_958 IPR038404 CH55_958 CH55_959 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CH55_96 IPR003439 ABC transporter-like CH55_96 IPR003593 AAA+ ATPase domain CH55_96 IPR017871 ABC transporter, conserved site CH55_96 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_96 IPR030679 CH55_96 CH55_960 IPR004681 TRAP transporter permease protein CH55_960 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CH55_961 IPR000792 Transcription regulator LuxR, C-terminal CH55_961 IPR001789 Signal transduction response regulator, receiver domain CH55_961 IPR011006 CheY-like superfamily CH55_961 IPR016032 Signal transduction response regulator, C-terminal effector CH55_963 IPR018636 Protein of unknown function DUF2058 CH55_965 IPR002509 Polysaccharide deacetylase CH55_965 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CH55_966 IPR005829 Sugar transporter, conserved site CH55_966 IPR011701 Major facilitator superfamily CH55_966 IPR036259 CH55_966 CH55_967 IPR002528 Multi antimicrobial extrusion protein CH55_968 IPR001518 Argininosuccinate synthase CH55_968 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CH55_968 IPR018223 Argininosuccinate synthase, conserved site CH55_968 IPR023437 Argininosuccinate synthase, type 2 subfamily CH55_968 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CH55_968 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CH55_969 IPR000262 FMN-dependent dehydrogenase CH55_969 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CH55_969 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CH55_969 IPR013785 Aldolase-type TIM barrel CH55_969 IPR020920 L-lactate dehydrogenase, bacterial CH55_97 IPR000515 MetI-like domain CH55_97 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CH55_97 IPR035906 CH55_97 CH55_971 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CH55_971 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CH55_971 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CH55_971 IPR029017 Enolase N-terminal domain-like CH55_971 IPR029065 Enolase C-terminal domain-like CH55_971 IPR036849 CH55_971 CH55_972 IPR011234 Fumarylacetoacetase, C-terminal-related CH55_972 IPR036663 CH55_972 CH55_973 IPR002347 Glucose/ribitol dehydrogenase CH55_973 IPR020904 Short-chain dehydrogenase/reductase, conserved site CH55_973 IPR036291 CH55_973 CH55_974 IPR007263 Protein of unknown function DUF393 CH55_975 IPR011701 Major facilitator superfamily CH55_975 IPR036259 CH55_975 CH55_976 IPR001207 Transposase, mutator type CH55_977 IPR003344 Bacterial Ig-like, group 1 CH55_977 IPR003535 Intimin/invasin bacterial adhesion mediator protein CH55_977 IPR008964 Invasin/intimin cell-adhesion CH55_977 IPR013783 Immunoglobulin-like fold CH55_977 IPR015217 Invasin, domain 3 CH55_977 IPR024519 Domain of unknown function DUF3442, intimin/invasin CH55_977 IPR038177 CH55_977 CH55_978 IPR007458 Protein of unknown function DUF496 CH55_979 IPR013120 Male sterility, NAD-binding CH55_979 IPR036291 CH55_979 CH55_98 IPR001320 Ionotropic glutamate receptor CH55_98 IPR001638 Extracellular solute-binding protein, family 3 CH55_98 IPR018313 Extracellular solute-binding protein, family 3, conserved site CH55_980 IPR012337 Ribonuclease H-like domain CH55_980 IPR013520 Exonuclease, RNase T/DNA polymerase III CH55_980 IPR013620 Exonuclease C-terminal CH55_980 IPR023607 Exodeoxyribonuclease I CH55_980 IPR036397 CH55_980 CH55_980 IPR038649 CH55_980 CH55_981 IPR002293 Amino acid/polyamine transporter I CH55_983 IPR001670 Alcohol dehydrogenase, iron-type CH55_983 IPR016205 Glycerol dehydrogenase CH55_983 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CH55_984 IPR003439 ABC transporter-like CH55_984 IPR003593 AAA+ ATPase domain CH55_984 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_985 IPR003439 ABC transporter-like CH55_985 IPR003593 AAA+ ATPase domain CH55_985 IPR017871 ABC transporter, conserved site CH55_985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CH55_986 IPR001851 ABC transporter, permease CH55_987 IPR032032 CH55_987 CH55_987 IPR038314 CH55_987 CH55_988 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CH55_988 IPR036291 CH55_988 CH55_989 IPR011322 Nitrogen regulatory PII-like, alpha/beta CH55_989 IPR013115 Histidine biosynthesis HisG, C-terminal CH55_989 IPR013820 ATP phosphoribosyltransferase, catalytic domain CH55_989 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CH55_989 IPR018198 ATP phosphoribosyltransferase, conserved site CH55_989 IPR020621 ATP phosphoribosyltransferase HisG, long form CH55_99 IPR003848 Domain of unknown function DUF218 CH55_99 IPR011990 Tetratricopeptide-like helical domain CH55_990 IPR001692 Histidinol dehydrogenase, conserved site CH55_990 IPR012131 Histidinol dehydrogenase CH55_990 IPR016161 Aldehyde/histidinol dehydrogenase CH55_990 IPR022695 Histidinol dehydrogenase, monofunctional CH55_991 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CH55_991 IPR004839 Aminotransferase, class I/classII CH55_991 IPR005861 Histidinol-phosphate aminotransferase family CH55_991 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CH55_991 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CH55_991 IPR015424 Pyridoxal phosphate-dependent transferase CH55_992 IPR000807 Imidazoleglycerol-phosphate dehydratase CH55_992 IPR005954 Histidinol-phosphatase CH55_992 IPR006543 Histidinol-phosphate phosphatase CH55_992 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CH55_992 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CH55_992 IPR020566 Histidine biosynthesis bifunctional protein HisB CH55_992 IPR020568 Ribosomal protein S5 domain 2-type fold CH55_992 IPR023214 HAD-like domain CH55_992 IPR036412 CH55_992 CH55_992 IPR038494 CH55_992 CH55_993 IPR010139 Imidazole glycerol phosphate synthase, subunit H CH55_993 IPR017926 Glutamine amidotransferase CH55_993 IPR029062 Class I glutamine amidotransferase-like CH55_994 IPR006062 Histidine biosynthesis CH55_994 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CH55_994 IPR011060 Ribulose-phosphate binding barrel CH55_994 IPR013785 Aldolase-type TIM barrel CH55_994 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CH55_995 IPR004651 Histidine biosynthesis, HisF CH55_995 IPR006062 Histidine biosynthesis CH55_995 IPR011060 Ribulose-phosphate binding barrel CH55_995 IPR013785 Aldolase-type TIM barrel CH55_996 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CH55_996 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CH55_996 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CH55_996 IPR023019 Histidine biosynthesis bifunctional protein HisIE CH55_996 IPR038019 CH55_996 CH55_997 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CH55_997 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CH55_997 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CH55_997 IPR006183 CH55_997 CH55_997 IPR006184 6-phosphogluconate-binding site CH55_997 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CH55_997 IPR013328 Dehydrogenase, multihelical CH55_997 IPR036291 CH55_997 CH55_998 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CH55_998 IPR005835 Nucleotidyl transferase CH55_998 IPR029044 Nucleotide-diphospho-sugar transferases CH55_999 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CH55_999 IPR005835 Nucleotidyl transferase CH55_999 IPR029044 Nucleotide-diphospho-sugar transferases