locus-tag class description ISU63_00005 PF11638 DnaA N-terminal domain ISU63_00005 PF00308 Bacterial dnaA protein ISU63_00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU63_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU63_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU63_00010 PF02767 DNA polymerase III beta subunit, central domain ISU63_00020 PF02463 RecF/RecN/SMC N terminal domain ISU63_00025 PF00204 DNA gyrase B ISU63_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_00025 PF01751 Toprim domain ISU63_00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU63_00025 PF18053 DNA gyrase B subunit insert domain ISU63_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU63_00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_00045 PF13291 ACT domain ISU63_00055 PF07119 Protein of unknown function (DUF1375) ISU63_00060 PF00011 Hsp20/alpha crystallin family ISU63_00065 PF00011 Hsp20/alpha crystallin family ISU63_00070 PF06826 Predicted Permease Membrane Region ISU63_00070 PF02080 TrkA-C domain ISU63_00075 PF00155 Aminotransferase class I and II ISU63_00085 PF00128 Alpha amylase, catalytic domain ISU63_00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU63_00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU63_00100 PF00691 OmpA family ISU63_00100 PF13488 Glycine zipper ISU63_00110 PF03352 Methyladenine glycosylase ISU63_00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU63_00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU63_00120 PF05746 DALR anticodon binding domain ISU63_00130 PF11254 Protein of unknown function (DUF3053) ISU63_00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU63_00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU63_00135 PF02378 Phosphotransferase system, EIIC ISU63_00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU63_00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU63_00145 PF05068 Mannitol repressor ISU63_00150 PF10928 Protein of unknown function (DUF2810) ISU63_00165 PF00672 HAMP domain ISU63_00165 PF02203 Tar ligand binding domain homologue ISU63_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU63_00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU63_00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU63_00175 PF02634 FdhD/NarQ family ISU63_00185 PF09163 Formate dehydrogenase N, transmembrane ISU63_00185 PF13247 4Fe-4S dicluster domain ISU63_00190 PF01292 Prokaryotic cytochrome b561 ISU63_00195 PF04216 Protein involved in formate dehydrogenase formation ISU63_00200 PF03841 L-seryl-tRNA selenium transferase ISU63_00200 PF12390 Selenocysteine synthase N terminal ISU63_00205 PF03144 Elongation factor Tu domain 2 ISU63_00205 PF09106 Elongation factor SelB, winged helix ISU63_00205 PF09107 Elongation factor SelB, winged helix ISU63_00205 PF00009 Elongation factor Tu GTP binding domain ISU63_00235 PF07690 Major Facilitator Superfamily ISU63_00245 PF08220 DeoR-like helix-turn-helix domain ISU63_00245 PF00455 DeoR C terminal sensor domain ISU63_00250 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU63_00250 PF01694 Rhomboid family ISU63_00255 PF00581 Rhodanese-like domain ISU63_00260 PF00196 Bacterial regulatory proteins, luxR family ISU63_00260 PF17874 MalT-like TPR region ISU63_00265 PF00343 Carbohydrate phosphorylase ISU63_00270 PF00343 Carbohydrate phosphorylase ISU63_00275 PF02446 4-alpha-glucanotransferase ISU63_00280 PF01521 Iron-sulphur cluster biosynthesis ISU63_00280 PF01106 NifU-like domain ISU63_00285 PF00156 Phosphoribosyl transferase domain ISU63_00290 PF00561 alpha/beta hydrolase fold ISU63_00295 PF07338 Protein of unknown function (DUF1471) ISU63_00300 PF09012 FeoC like transcriptional regulator ISU63_00305 PF02421 Ferrous iron transport protein B ISU63_00305 PF07670 Nucleoside recognition ISU63_00305 PF17910 FeoB cytosolic helical domain ISU63_00305 PF07664 Ferrous iron transport protein B C terminus ISU63_00310 PF04023 FeoA domain ISU63_00315 PF09371 Tex-like protein N-terminal domain ISU63_00315 PF16921 Tex protein YqgF-like domain ISU63_00315 PF00575 S1 RNA binding domain ISU63_00315 PF17674 HHH domain ISU63_00320 PF03449 Transcription elongation factor, N-terminal ISU63_00320 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU63_00325 PF00486 Transcriptional regulatory protein, C terminal ISU63_00325 PF00072 Response regulator receiver domain ISU63_00330 PF00512 His Kinase A (phospho-acceptor) domain ISU63_00330 PF00672 HAMP domain ISU63_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_00335 PF01293 Phosphoenolpyruvate carboxykinase ISU63_00340 PF01430 Hsp33 protein ISU63_00345 PF01479 S4 domain ISU63_00350 PF13419 Haloacid dehalogenase-like hydrolase ISU63_00355 PF07095 Intracellular growth attenuator protein IgaA ISU63_00360 PF00293 NUDIX domain ISU63_00365 PF17092 Penicillin-binding protein OB-like domain ISU63_00365 PF00912 Transglycosylase ISU63_00365 PF00905 Penicillin binding protein transpeptidase domain ISU63_00390 PF03958 Bacterial type II/III secretion system short domain ISU63_00390 PF00263 Bacterial type II and III secretion system protein ISU63_00395 PF01202 Shikimate kinase ISU63_00400 PF01761 3-dehydroquinate synthase ISU63_00405 PF05036 Sporulation related domain ISU63_00410 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU63_00415 PF00834 Ribulose-phosphate 3 epimerase family ISU63_00420 PF13419 Haloacid dehalogenase-like hydrolase ISU63_00425 PF00579 tRNA synthetases class I (W and Y) ISU63_00430 PF14824 Sirohaem biosynthesis protein central ISU63_00430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU63_00430 PF10414 Sirohaem synthase dimerisation region ISU63_00435 PF01226 Formate/nitrite transporter ISU63_00440 PF13806 Rieske-like [2Fe-2S] domain ISU63_00445 PF04324 BFD-like [2Fe-2S] binding domain ISU63_00445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU63_00445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU63_00445 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_00445 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU63_00450 PF07969 Amidohydrolase family ISU63_00455 PF07690 Major Facilitator Superfamily ISU63_00465 PF00356 Bacterial regulatory proteins, lacI family ISU63_00470 PF02056 Family 4 glycosyl hydrolase ISU63_00470 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU63_00475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU63_00480 PF05872 Bacterial protein of unknown function (DUF853) ISU63_00485 PF00117 Glutamine amidotransferase class-I ISU63_00490 PF00202 Aminotransferase class-III ISU63_00495 PF12805 FUSC-like inner membrane protein yccS ISU63_00500 PF13545 Crp-like helix-turn-helix domain ISU63_00500 PF00027 Cyclic nucleotide-binding domain ISU63_00505 PF02566 OsmC-like protein ISU63_00515 PF00485 Phosphoribulokinase / Uridine kinase family ISU63_00520 PF06794 Uncharacterised protein family (UPF0270) ISU63_00525 PF00561 alpha/beta hydrolase fold ISU63_00530 PF01810 LysE type translocator ISU63_00535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU63_00540 PF00005 ABC transporter ISU63_00545 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_00550 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU63_00560 PF00535 Glycosyl transferase family 2 ISU63_00570 PF02525 Flavodoxin-like fold ISU63_00575 PF00999 Sodium/hydrogen exchanger family ISU63_00575 PF02254 TrkA-N domain ISU63_00580 PF09526 Probable metal-binding protein (DUF2387) ISU63_00585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU63_00590 PF04102 SlyX ISU63_00595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU63_00595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU63_00600 PF13309 HTH domain ISU63_00600 PF08348 YheO-like PAS domain ISU63_00605 PF02635 DsrE/DsrF-like family ISU63_00610 PF02635 DsrE/DsrF-like family ISU63_00615 PF04077 DsrH like protein ISU63_00620 PF00164 Ribosomal protein S12/S23 ISU63_00625 PF00177 Ribosomal protein S7p/S5e ISU63_00630 PF00679 Elongation factor G C-terminus ISU63_00630 PF14492 Elongation Factor G, domain II ISU63_00630 PF03764 Elongation factor G, domain IV ISU63_00630 PF00009 Elongation factor Tu GTP binding domain ISU63_00630 PF03144 Elongation factor Tu domain 2 ISU63_00635 PF00009 Elongation factor Tu GTP binding domain ISU63_00635 PF03144 Elongation factor Tu domain 2 ISU63_00635 PF03143 Elongation factor Tu C-terminal domain ISU63_00640 PF01797 Transposase IS200 like ISU63_00645 PF04324 BFD-like [2Fe-2S] binding domain ISU63_00650 PF00210 Ferritin-like domain ISU63_00655 PF00338 Ribosomal protein S10p/S20e ISU63_00660 PF00297 Ribosomal protein L3 ISU63_00665 PF00573 Ribosomal protein L4/L1 family ISU63_00670 PF00276 Ribosomal protein L23 ISU63_00675 PF00181 Ribosomal Proteins L2, RNA binding domain ISU63_00675 PF03947 Ribosomal Proteins L2, C-terminal domain ISU63_00680 PF00203 Ribosomal protein S19 ISU63_00685 PF00237 Ribosomal protein L22p/L17e ISU63_00690 PF00189 Ribosomal protein S3, C-terminal domain ISU63_00690 PF07650 KH domain ISU63_00695 PF00252 Ribosomal protein L16p/L10e ISU63_00700 PF00831 Ribosomal L29 protein ISU63_00705 PF00366 Ribosomal protein S17 ISU63_00710 PF00238 Ribosomal protein L14p/L23e ISU63_00715 PF00467 KOW motif ISU63_00715 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU63_00720 PF00281 Ribosomal protein L5 ISU63_00720 PF00673 ribosomal L5P family C-terminus ISU63_00725 PF00253 Ribosomal protein S14p/S29e ISU63_00730 PF00410 Ribosomal protein S8 ISU63_00735 PF00347 Ribosomal protein L6 ISU63_00740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU63_00745 PF03719 Ribosomal protein S5, C-terminal domain ISU63_00745 PF00333 Ribosomal protein S5, N-terminal domain ISU63_00750 PF00327 Ribosomal protein L30p/L7e ISU63_00755 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU63_00760 PF00344 SecY translocase ISU63_00765 PF00444 Ribosomal protein L36 ISU63_00770 PF00416 Ribosomal protein S13/S18 ISU63_00775 PF00411 Ribosomal protein S11 ISU63_00780 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU63_00780 PF01479 S4 domain ISU63_00785 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU63_00785 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU63_00785 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU63_00790 PF01196 Ribosomal protein L17 ISU63_00795 PF13411 MerR HTH family regulatory protein ISU63_00800 PF03889 Alternative ribosome-rescue factor A ISU63_00805 PF01741 Large-conductance mechanosensitive channel, MscL ISU63_00810 PF02080 TrkA-C domain ISU63_00810 PF02254 TrkA-N domain ISU63_00815 PF01189 16S rRNA methyltransferase RsmB/F ISU63_00815 PF01029 NusB family ISU63_00820 PF02911 Formyl transferase, C-terminal domain ISU63_00820 PF00551 Formyl transferase ISU63_00825 PF01327 Polypeptide deformylase ISU63_00830 PF02481 DNA recombination-mediator protein A ISU63_00830 PF17782 DprA winged helix domain ISU63_00835 PF04361 Protein of unknown function (DUF494) ISU63_00840 PF01396 Topoisomerase DNA binding C4 zinc finger ISU63_00845 PF01300 Telomere recombination ISU63_00850 PF01488 Shikimate / quinate 5-dehydrogenase ISU63_00850 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU63_00850 PF08501 Shikimate dehydrogenase substrate binding domain ISU63_00855 PF00132 Bacterial transferase hexapeptide (six repeats) ISU63_00860 PF01695 IstB-like ATP binding protein ISU63_00865 PF00665 Integrase core domain ISU63_00865 PF02796 Helix-turn-helix domain of resolvase ISU63_00870 PF00583 Acetyltransferase (GNAT) family ISU63_00870 PF09500 Putative thioesterase (yiiD_Cterm) ISU63_00875 PF05170 AsmA family ISU63_00880 PF00860 Permease family ISU63_00885 PF03616 Sodium/glutamate symporter ISU63_00895 PF17191 RecG wedge domain ISU63_00895 PF00270 DEAD/DEAH box helicase ISU63_00895 PF00271 Helicase conserved C-terminal domain ISU63_00900 PF00588 SpoU rRNA Methylase family ISU63_00900 PF12105 SpoU, rRNA methylase, C-terminal ISU63_00905 PF02824 TGS domain ISU63_00905 PF04607 Region found in RelA / SpoT proteins ISU63_00905 PF13291 ACT domain ISU63_00910 PF01192 RNA polymerase Rpb6 ISU63_00915 PF00625 Guanylate kinase ISU63_00920 PF03120 NAD-dependent DNA ligase OB-fold domain ISU63_00920 PF01653 NAD-dependent DNA ligase adenylation domain ISU63_00925 PF03458 UPF0126 domain ISU63_00930 PF08340 Domain of unknown function (DUF1732) ISU63_00930 PF03755 YicC-like family, N-terminal region ISU63_00935 PF01138 3' exoribonuclease family, domain 1 ISU63_00935 PF03725 3' exoribonuclease family, domain 2 ISU63_00940 PF00156 Phosphoribosyl transferase domain ISU63_00945 PF00440 Bacterial regulatory proteins, tetR family ISU63_00950 PF00692 dUTPase ISU63_00955 PF02441 Flavoprotein ISU63_00955 PF04127 DNA / pantothenate metabolism flavoprotein ISU63_00960 PF04002 RadC-like JAB domain ISU63_00965 PF00830 Ribosomal L28 family ISU63_00970 PF00471 Ribosomal protein L33 ISU63_00975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU63_00975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU63_00975 PF06827 Zinc finger found in FPG and IleRS ISU63_00980 PF01467 Cytidylyltransferase-like ISU63_00985 PF00535 Glycosyl transferase family 2 ISU63_00990 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU63_00995 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU63_01000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU63_01005 PF01370 NAD dependent epimerase/dehydratase family ISU63_01010 PF00155 Aminotransferase class I and II ISU63_01015 PF00107 Zinc-binding dehydrogenase ISU63_01015 PF08240 Alcohol dehydrogenase GroES-like domain ISU63_01025 PF01551 Peptidase family M23 ISU63_01030 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU63_01030 PF01676 Metalloenzyme superfamily ISU63_01035 PF00581 Rhodanese-like domain ISU63_01040 PF00462 Glutaredoxin ISU63_01045 PF02556 Preprotein translocase subunit SecB ISU63_01050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU63_01050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU63_01055 PF00132 Bacterial transferase hexapeptide (six repeats) ISU63_01055 PF06426 Serine acetyltransferase, N-terminal ISU63_01060 PF00588 SpoU rRNA Methylase family ISU63_01065 PF12833 Helix-turn-helix domain ISU63_01065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU63_01065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU63_01065 PF02805 Metal binding domain of Ada ISU63_01070 PF00672 HAMP domain ISU63_01070 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU63_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_01070 PF00512 His Kinase A (phospho-acceptor) domain ISU63_01075 PF00072 Response regulator receiver domain ISU63_01075 PF00486 Transcriptional regulatory protein, C terminal ISU63_01080 PF07813 LTXXQ motif family protein ISU63_01090 PF04754 Putative transposase, YhgA-like ISU63_01095 PF01545 Cation efflux family ISU63_01095 PF16916 Dimerisation domain of Zinc Transporter ISU63_01100 PF00365 Phosphofructokinase ISU63_01115 PF00939 Sodium:sulfate symporter transmembrane region ISU63_01120 PF03737 Aldolase/RraA ISU63_01125 PF02585 GlcNAc-PI de-N-acetylase ISU63_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_01130 PF03466 LysR substrate binding domain ISU63_01135 PF00121 Triosephosphate isomerase ISU63_01140 PF07305 Protein of unknown function (DUF1454) ISU63_01145 PF05656 Protein of unknown function (DUF805) ISU63_01150 PF00175 Oxidoreductase NAD-binding domain ISU63_01150 PF00970 Oxidoreductase FAD-binding domain ISU63_01155 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU63_01160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_01160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_01165 PF00230 Major intrinsic protein ISU63_01170 PF06005 Cell division protein ZapB ISU63_01180 PF00664 ABC transporter transmembrane region ISU63_01180 PF00005 ABC transporter ISU63_01180 PF03412 Peptidase C39 family ISU63_01185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_01185 PF00529 HlyD membrane-fusion protein of T1SS ISU63_01200 PF03737 Aldolase/RraA ISU63_01205 PF01040 UbiA prenyltransferase family ISU63_01210 PF07724 AAA domain (Cdc48 subfamily) ISU63_01210 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_01210 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_01215 PF00227 Proteasome subunit ISU63_01220 PF05036 Sporulation related domain ISU63_01225 PF00356 Bacterial regulatory proteins, lacI family ISU63_01230 PF18074 Primosomal protein N C-terminal domain ISU63_01230 PF00271 Helicase conserved C-terminal domain ISU63_01230 PF00270 DEAD/DEAH box helicase ISU63_01230 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU63_01230 PF17764 3′ DNA-binding domain (3′BD) ISU63_01235 PF01197 Ribosomal protein L31 ISU63_01240 PF05360 yiaA/B two helix domain ISU63_01245 PF01340 Met Apo-repressor, MetJ ISU63_01255 PF00696 Amino acid kinase family ISU63_01255 PF00742 Homoserine dehydrogenase ISU63_01255 PF03447 Homoserine dehydrogenase, NAD binding domain ISU63_01260 PF02219 Methylenetetrahydrofolate reductase ISU63_01270 PF00311 Phosphoenolpyruvate carboxylase ISU63_01275 PF01546 Peptidase family M20/M25/M40 ISU63_01275 PF07687 Peptidase dimerisation domain ISU63_01280 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU63_01280 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU63_01285 PF00696 Amino acid kinase family ISU63_01290 PF14698 Argininosuccinate lyase C-terminal ISU63_01290 PF00206 Lyase ISU63_01295 PF07715 TonB-dependent Receptor Plug Domain ISU63_01295 PF00593 TonB dependent receptor ISU63_01305 PF00005 ABC transporter ISU63_01305 PF00664 ABC transporter transmembrane region ISU63_01310 PF00529 HlyD membrane-fusion protein of T1SS ISU63_01315 PF03544 Gram-negative bacterial TonB protein C-terminal ISU63_01320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU63_01320 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_01325 PF08534 Redoxin ISU63_01325 PF00462 Glutaredoxin ISU63_01330 PF03466 LysR substrate binding domain ISU63_01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_01335 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_01335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU63_01340 PF00440 Bacterial regulatory proteins, tetR family ISU63_01345 PF07226 Protein of unknown function (DUF1422) ISU63_01350 PF05958 tRNA (Uracil-5-)-methyltransferase ISU63_01355 PF00593 TonB dependent receptor ISU63_01355 PF07715 TonB-dependent Receptor Plug Domain ISU63_01360 PF01177 Asp/Glu/Hydantoin racemase ISU63_01395 PF13407 Periplasmic binding protein domain ISU63_01400 PF00005 ABC transporter ISU63_01405 PF02653 Branched-chain amino acid transport system / permease component ISU63_01410 PF02653 Branched-chain amino acid transport system / permease component ISU63_01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_01415 PF03466 LysR substrate binding domain ISU63_01420 PF04219 Protein of unknown function, DUF ISU63_01425 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU63_01425 PF01078 Magnesium chelatase, subunit ChlI ISU63_01430 PF08046 IlvGEDA operon leader peptide ISU63_01435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU63_01435 PF00205 Thiamine pyrophosphate enzyme, central domain ISU63_01435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU63_01445 PF01063 Amino-transferase class IV ISU63_01450 PF00920 Dehydratase family ISU63_01455 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU63_01455 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_01485 PF03466 LysR substrate binding domain ISU63_01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_01490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU63_01490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU63_01515 PF01320 Colicin immunity protein / pyocin immunity protein ISU63_01520 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_01520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_01530 PF13953 PapC C-terminal domain ISU63_01530 PF00577 Outer membrane usher protein ISU63_01530 PF13954 PapC N-terminal domain ISU63_01535 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_01535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_01545 PF00872 Transposase, Mutator family ISU63_01565 PF13361 UvrD-like helicase C-terminal domain ISU63_01565 PF00580 UvrD/REP helicase N-terminal domain ISU63_01575 PF00270 DEAD/DEAH box helicase ISU63_01575 PF00271 Helicase conserved C-terminal domain ISU63_01580 PF00085 Thioredoxin ISU63_01585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU63_01585 PF07497 Rho termination factor, RNA-binding domain ISU63_01585 PF07498 Rho termination factor, N-terminal domain ISU63_01590 PF00953 Glycosyl transferase family 4 ISU63_01595 PF02706 Chain length determinant protein ISU63_01600 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU63_01605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU63_01605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU63_01605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU63_01610 PF16363 GDP-mannose 4,6 dehydratase ISU63_01615 PF00483 Nucleotidyl transferase ISU63_01625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU63_01630 PF01943 Polysaccharide biosynthesis protein ISU63_01635 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU63_01640 PF06899 WzyE protein, O-antigen assembly polymerase ISU63_01645 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU63_01650 PF00324 Amino acid permease ISU63_01680 PF07719 Tetratricopeptide repeat ISU63_01680 PF07219 HemY protein N-terminus ISU63_01685 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU63_01690 PF02602 Uroporphyrinogen-III synthase HemD ISU63_01695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU63_01695 PF03900 Porphobilinogen deaminase, C-terminal domain ISU63_01705 PF12633 Adenylate cyclase NT domain ISU63_01705 PF01295 Adenylate cyclase, class-I ISU63_01710 PF01491 Frataxin-like domain ISU63_01715 PF13627 Prokaryotic lipoprotein-attachment site ISU63_01720 PF01678 Diaminopimelate epimerase ISU63_01725 PF04340 Protein of unknown function, DUF484 ISU63_01730 PF00589 Phage integrase family ISU63_01730 PF02899 Phage integrase, N-terminal SAM-like domain ISU63_01735 PF13419 Haloacid dehalogenase-like hydrolase ISU63_01740 PF13361 UvrD-like helicase C-terminal domain ISU63_01740 PF00580 UvrD/REP helicase N-terminal domain ISU63_01755 PF09370 Phosphoenolpyruvate hydrolase-like ISU63_01760 PF01544 CorA-like Mg2+ transporter protein ISU63_01765 PF00892 EamA-like transporter family ISU63_01770 PF03061 Thioesterase superfamily ISU63_01775 PF02253 Phospholipase A1 ISU63_01780 PF00570 HRDC domain ISU63_01780 PF00270 DEAD/DEAH box helicase ISU63_01780 PF00271 Helicase conserved C-terminal domain ISU63_01780 PF09382 RQC domain ISU63_01780 PF16124 RecQ zinc-binding ISU63_01785 PF01810 LysE type translocator ISU63_01790 PF01810 LysE type translocator ISU63_01795 PF12146 Serine aminopeptidase, S33 ISU63_01810 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU63_01815 PF04324 BFD-like [2Fe-2S] binding domain ISU63_01815 PF01266 FAD dependent oxidoreductase ISU63_01820 PF00890 FAD binding domain ISU63_01825 PF13183 4Fe-4S dicluster domain ISU63_01825 PF02754 Cysteine-rich domain ISU63_01830 PF08786 DcrB ISU63_01835 PF02592 Putative vitamin uptake transporter ISU63_01840 PF01206 Sulfurtransferase TusA ISU63_01845 PF00403 Heavy-metal-associated domain ISU63_01850 PF07947 YhhN family ISU63_01865 PF06611 Protein of unknown function (DUF1145) ISU63_01875 PF00448 SRP54-type protein, GTPase domain ISU63_01875 PF00448 SRP54-type protein, GTPase domain ISU63_01875 PF02881 SRP54-type protein, helical bundle domain ISU63_01875 PF02881 SRP54-type protein, helical bundle domain ISU63_01880 PF00005 ABC transporter ISU63_01885 PF02687 FtsX-like permease family ISU63_01885 PF18075 FtsX extracellular domain ISU63_01890 PF00140 Sigma-70 factor, region 1.2 ISU63_01890 PF04542 Sigma-70 region 2 ISU63_01890 PF04545 Sigma-70, region 4 ISU63_01895 PF01797 Transposase IS200 like ISU63_01900 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU63_01905 PF13458 Periplasmic binding protein ISU63_01910 PF02653 Branched-chain amino acid transport system / permease component ISU63_01915 PF02653 Branched-chain amino acid transport system / permease component ISU63_01915 PF11862 Domain of unknown function (DUF3382) ISU63_01920 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU63_01920 PF00005 ABC transporter ISU63_01925 PF00005 ABC transporter ISU63_01965 PF13416 Bacterial extracellular solute-binding protein ISU63_01970 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_01975 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_01980 PF00005 ABC transporter ISU63_01980 PF17912 MalK OB fold domain ISU63_01985 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU63_01990 PF03547 Membrane transport protein ISU63_01995 PF00892 EamA-like transporter family ISU63_02000 PF03466 LysR substrate binding domain ISU63_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_02005 PF08267 Cobalamin-independent synthase, N-terminal domain ISU63_02005 PF01717 Cobalamin-independent synthase, Catalytic domain ISU63_02010 PF01738 Dienelactone hydrolase family ISU63_02015 PF01048 Phosphorylase superfamily ISU63_02025 PF13722 5TM C-terminal transporter carbon starvation CstA ISU63_02025 PF02554 Carbon starvation protein CstA ISU63_02030 PF09335 SNARE associated Golgi protein ISU63_02035 PF02646 RmuC family ISU63_02040 PF01209 ubiE/COQ5 methyltransferase family ISU63_02045 PF02036 SCP-2 sterol transfer family ISU63_02050 PF03109 ABC1 family ISU63_02055 PF02416 mttA/Hcf106 family ISU63_02065 PF00902 Sec-independent protein translocase protein (TatC) ISU63_02075 PF02796 Helix-turn-helix domain of resolvase ISU63_02075 PF00665 Integrase core domain ISU63_02080 PF01695 IstB-like ATP binding protein ISU63_02085 PF01026 TatD related DNase ISU63_02090 PF00490 Delta-aminolevulinic acid dehydratase ISU63_02095 PF02357 Transcription termination factor nusG ISU63_02100 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU63_02105 PF00970 Oxidoreductase FAD-binding domain ISU63_02105 PF00175 Oxidoreductase NAD-binding domain ISU63_02110 PF02803 Thiolase, C-terminal domain ISU63_02110 PF00108 Thiolase, N-terminal domain ISU63_02115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU63_02115 PF00378 Enoyl-CoA hydratase/isomerase ISU63_02115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU63_02120 PF00557 Metallopeptidase family M24 ISU63_02125 PF01205 Uncharacterized protein family UPF0029 ISU63_02125 PF09186 Domain of unknown function (DUF1949) ISU63_02140 PF02386 Cation transport protein ISU63_02145 PF12724 Flavodoxin domain ISU63_02175 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU63_02175 PF01565 FAD binding domain ISU63_02180 PF02237 Biotin protein ligase C terminal domain ISU63_02180 PF03099 Biotin/lipoate A/B protein ligase family ISU63_02180 PF08279 HTH domain ISU63_02185 PF00485 Phosphoribulokinase / Uridine kinase family ISU63_02190 PF13673 Acetyltransferase (GNAT) domain ISU63_02195 PF02796 Helix-turn-helix domain of resolvase ISU63_02195 PF00665 Integrase core domain ISU63_02200 PF01695 IstB-like ATP binding protein ISU63_02225 PF00009 Elongation factor Tu GTP binding domain ISU63_02225 PF03143 Elongation factor Tu C-terminal domain ISU63_02225 PF03144 Elongation factor Tu domain 2 ISU63_02230 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU63_02235 PF00467 KOW motif ISU63_02235 PF02357 Transcription termination factor nusG ISU63_02240 PF03946 Ribosomal protein L11, N-terminal domain ISU63_02240 PF00298 Ribosomal protein L11, RNA binding domain ISU63_02245 PF00687 Ribosomal protein L1p/L10e family ISU63_02250 PF00466 Ribosomal protein L10 ISU63_02255 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU63_02255 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU63_02260 PF04565 RNA polymerase Rpb2, domain 3 ISU63_02260 PF04561 RNA polymerase Rpb2, domain 2 ISU63_02260 PF10385 RNA polymerase beta subunit external 1 domain ISU63_02260 PF00562 RNA polymerase Rpb2, domain 6 ISU63_02260 PF04563 RNA polymerase beta subunit ISU63_02260 PF04560 RNA polymerase Rpb2, domain 7 ISU63_02265 PF05000 RNA polymerase Rpb1, domain 4 ISU63_02265 PF04983 RNA polymerase Rpb1, domain 3 ISU63_02265 PF04997 RNA polymerase Rpb1, domain 1 ISU63_02265 PF00623 RNA polymerase Rpb1, domain 2 ISU63_02265 PF04998 RNA polymerase Rpb1, domain 5 ISU63_02270 PF01797 Transposase IS200 like ISU63_02275 PF06968 Biotin and Thiamin Synthesis associated domain ISU63_02275 PF04055 Radical SAM superfamily ISU63_02280 PF05690 Thiazole biosynthesis protein ThiG ISU63_02290 PF00899 ThiF family ISU63_02295 PF02581 Thiamine monophosphate synthase ISU63_02300 PF13667 ThiC-associated domain ISU63_02300 PF01964 Radical SAM ThiC family ISU63_02305 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU63_02310 PF09297 NADH pyrophosphatase zinc ribbon domain ISU63_02310 PF00293 NUDIX domain ISU63_02320 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU63_02325 PF04493 Endonuclease V ISU63_02330 PF04222 Protein of unknown function (DUF416) ISU63_02335 PF00216 Bacterial DNA-binding protein ISU63_02340 PF07356 Protein of unknown function (DUF1481) ISU63_02345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU63_02345 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU63_02345 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU63_02350 PF02142 MGS-like domain ISU63_02350 PF01808 AICARFT/IMPCHase bienzyme ISU63_02385 PF01695 IstB-like ATP binding protein ISU63_02390 PF00665 Integrase core domain ISU63_02390 PF02796 Helix-turn-helix domain of resolvase ISU63_02400 PF00593 TonB dependent receptor ISU63_02400 PF07715 TonB-dependent Receptor Plug Domain ISU63_02405 PF07687 Peptidase dimerisation domain ISU63_02405 PF01546 Peptidase family M20/M25/M40 ISU63_02410 PF03806 AbgT putative transporter family ISU63_02415 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU63_02415 PF12468 Type III secretion system leucine rich repeat protein ISU63_02420 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU63_02420 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU63_02420 PF12468 Type III secretion system leucine rich repeat protein ISU63_02420 PF12468 Type III secretion system leucine rich repeat protein ISU63_02430 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU63_02430 PF12468 Type III secretion system leucine rich repeat protein ISU63_02435 PF03797 Autotransporter beta-domain ISU63_02445 PF07906 ShET2 enterotoxin, N-terminal region ISU63_02455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_02455 PF00529 HlyD membrane-fusion protein of T1SS ISU63_02465 PF00563 EAL domain ISU63_02465 PF00990 Diguanylate cyclase, GGDEF domain ISU63_02465 PF08447 PAS fold ISU63_02465 PF08448 PAS fold ISU63_02475 PF00312 Ribosomal protein S15 ISU63_02480 PF09157 Pseudouridine synthase II TruB, C-terminal ISU63_02480 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU63_02480 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU63_02485 PF02033 Ribosome-binding factor A ISU63_02490 PF04760 Translation initiation factor IF-2, N-terminal region ISU63_02490 PF00009 Elongation factor Tu GTP binding domain ISU63_02490 PF03144 Elongation factor Tu domain 2 ISU63_02490 PF08364 Bacterial translation initiation factor IF-2 associated region ISU63_02490 PF11987 Translation-initiation factor 2 ISU63_02495 PF00575 S1 RNA binding domain ISU63_02495 PF08529 NusA N-terminal domain ISU63_02495 PF13184 NusA-like KH domain ISU63_02500 PF02576 RimP N-terminal domain ISU63_02500 PF17384 RimP C-terminal SH3 domain ISU63_02515 PF03840 Preprotein translocase SecG subunit ISU63_02520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU63_02520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU63_02520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU63_02520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU63_02525 PF00809 Pterin binding enzyme ISU63_02530 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_02530 PF17862 AAA+ lid domain ISU63_02530 PF06480 FtsH Extracellular ISU63_02530 PF01434 Peptidase family M41 ISU63_02535 PF01728 FtsJ-like methyltransferase ISU63_02540 PF01985 CRS1 / YhbY (CRM) domain ISU63_02545 PF03449 Transcription elongation factor, N-terminal ISU63_02545 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU63_02550 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU63_02555 PF00072 Response regulator receiver domain ISU63_02555 PF00486 Transcriptional regulatory protein, C terminal ISU63_02560 PF00672 HAMP domain ISU63_02560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_02560 PF00512 His Kinase A (phospho-acceptor) domain ISU63_02565 PF01926 50S ribosome-binding GTPase ISU63_02565 PF01018 GTP1/OBG ISU63_02570 PF00892 EamA-like transporter family ISU63_02575 PF01016 Ribosomal L27 protein ISU63_02580 PF00829 Ribosomal prokaryotic L21 protein ISU63_02585 PF00348 Polyprenyl synthetase ISU63_02595 PF13693 Winged helix-turn-helix DNA-binding ISU63_02600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU63_02600 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU63_02605 PF01316 Arginine repressor, DNA binding domain ISU63_02605 PF02863 Arginine repressor, C-terminal domain ISU63_02615 PF08245 Mur ligase middle domain ISU63_02615 PF02875 Mur ligase family, glutamate ligase domain ISU63_02615 PF01225 Mur ligase family, catalytic domain ISU63_02620 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU63_02625 PF00719 Inorganic pyrophosphatase ISU63_02630 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU63_02635 PF04357 TamB, inner membrane protein subunit of TAM complex ISU63_02640 PF07244 Surface antigen variable number repeat ISU63_02640 PF01103 Surface antigen ISU63_02640 PF17243 POTRA domain TamA domain 1 ISU63_02645 PF01625 Peptide methionine sulfoxide reductase ISU63_02650 PF03471 Transporter associated domain ISU63_02650 PF00571 CBS domain ISU63_02650 PF01595 Cyclin M transmembrane N-terminal domain ISU63_02655 PF06526 Protein of unknown function (DUF1107) ISU63_02660 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU63_02665 PF00459 Inositol monophosphatase family ISU63_02670 PF02872 5'-nucleotidase, C-terminal domain ISU63_02670 PF00149 Calcineurin-like phosphoesterase ISU63_02675 PF01814 Hemerythrin HHE cation binding domain ISU63_02675 PF04405 Domain of Unknown function (DUF542) ISU63_02680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU63_02680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU63_02685 PF08525 Opacity-associated protein A N-terminal motif ISU63_02685 PF04225 Opacity-associated protein A LysM-like domain ISU63_02695 PF01797 Transposase IS200 like ISU63_02700 PF03948 Ribosomal protein L9, C-terminal domain ISU63_02700 PF01281 Ribosomal protein L9, N-terminal domain ISU63_02705 PF01084 Ribosomal protein S18 ISU63_02710 PF00436 Single-strand binding protein family ISU63_02715 PF01250 Ribosomal protein S6 ISU63_02720 PF00326 Prolyl oligopeptidase family ISU63_02725 PF00665 Integrase core domain ISU63_02725 PF02796 Helix-turn-helix domain of resolvase ISU63_02730 PF01695 IstB-like ATP binding protein ISU63_02740 PF07338 Protein of unknown function (DUF1471) ISU63_02745 PF02770 Acyl-CoA dehydrogenase, middle domain ISU63_02745 PF18158 Adaptive response protein AidB N-terminal domain ISU63_02745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU63_02750 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU63_02750 PF00588 SpoU rRNA Methylase family ISU63_02755 PF17876 Cold shock domain ISU63_02755 PF08461 Ribonuclease R winged-helix domain ISU63_02755 PF08206 Ribonuclease B OB domain ISU63_02755 PF00773 RNB domain ISU63_02755 PF00575 S1 RNA binding domain ISU63_02760 PF02082 Transcriptional regulator ISU63_02765 PF00709 Adenylosuccinate synthetase ISU63_02770 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU63_02775 PF01145 SPFH domain / Band 7 family ISU63_02780 PF01145 SPFH domain / Band 7 family ISU63_02780 PF12221 Bacterial membrane protein N terminal ISU63_02785 PF01926 50S ribosome-binding GTPase ISU63_02785 PF13167 GTP-binding GTPase N-terminal ISU63_02785 PF16360 GTP-binding GTPase Middle Region ISU63_02790 PF17209 Hfq protein ISU63_02800 PF08676 MutL C terminal dimerisation domain ISU63_02800 PF01119 DNA mismatch repair protein, C-terminal domain ISU63_02805 PF01520 N-acetylmuramoyl-L-alanine amidase ISU63_02810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU63_02815 PF03853 YjeF-related protein N-terminus ISU63_02815 PF01256 Carbohydrate kinase ISU63_02820 PF08331 Domain of unknown function (DUF1730) ISU63_02835 PF00929 Exonuclease ISU63_02840 PF03193 RsgA GTPase ISU63_02845 PF02666 Phosphatidylserine decarboxylase ISU63_02850 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU63_02850 PF12795 Mechanosensitive ion channel porin domain ISU63_02850 PF00924 Mechanosensitive ion channel ISU63_02855 PF00152 tRNA synthetases class II (D, K and N) ISU63_02865 PF00890 FAD binding domain ISU63_02865 PF02910 Fumarate reductase flavoprotein C-term ISU63_02870 PF13183 4Fe-4S dicluster domain ISU63_02870 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU63_02875 PF02300 Fumarate reductase subunit C ISU63_02880 PF02313 Fumarate reductase subunit D ISU63_02885 PF00893 Small Multidrug Resistance protein ISU63_02890 PF08207 Elongation factor P (EF-P) KOW-like domain ISU63_02890 PF09285 Elongation factor P, C-terminal ISU63_02890 PF01132 Elongation factor P (EF-P) OB domain ISU63_02895 PF04055 Radical SAM superfamily ISU63_02900 PF13698 Domain of unknown function (DUF4156) ISU63_02905 PF00118 TCP-1/cpn60 chaperonin family ISU63_02910 PF00166 Chaperonin 10 Kd subunit ISU63_02915 PF04186 FxsA cytoplasmic membrane protein ISU63_02920 PF00206 Lyase ISU63_02920 PF10415 Fumarase C C-terminus ISU63_02925 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU63_02930 PF03091 CutA1 divalent ion tolerance protein ISU63_02935 PF11412 Disulphide bond corrector protein DsbC ISU63_02935 PF02683 Cytochrome C biogenesis protein transmembrane region ISU63_02940 PF00384 Molybdopterin oxidoreductase ISU63_02940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU63_02940 PF01568 Molydopterin dinucleotide binding domain ISU63_02945 PF12800 4Fe-4S binding domain ISU63_02945 PF13247 4Fe-4S dicluster domain ISU63_02950 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_02950 PF13247 4Fe-4S dicluster domain ISU63_02950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU63_02980 PF06379 L-rhamnose-proton symport protein (RhaT) ISU63_02985 PF12833 Helix-turn-helix domain ISU63_02985 PF02311 AraC-like ligand binding domain ISU63_02990 PF02311 AraC-like ligand binding domain ISU63_02990 PF12833 Helix-turn-helix domain ISU63_03000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_03000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_03005 PF06134 L-rhamnose isomerase (RhaA) ISU63_03010 PF00596 Class II Aldolase and Adducin N-terminal domain ISU63_03015 PF00465 Iron-containing alcohol dehydrogenase ISU63_03020 PF05336 L-rhamnose mutarotase ISU63_03025 PF00436 Single-strand binding protein family ISU63_03030 PF00005 ABC transporter ISU63_03030 PF17760 UvrA interaction domain ISU63_03030 PF17755 UvrA DNA-binding domain ISU63_03035 PF04237 YjbR ISU63_03040 PF00155 Aminotransferase class I and II ISU63_03045 PF01168 Alanine racemase, N-terminal domain ISU63_03045 PF00842 Alanine racemase, C-terminal domain ISU63_03050 PF03796 DnaB-like helicase C terminal domain ISU63_03050 PF00772 DnaB-like helicase N terminal domain ISU63_03055 PF08240 Alcohol dehydrogenase GroES-like domain ISU63_03055 PF00107 Zinc-binding dehydrogenase ISU63_03060 PF09583 Phage shock protein G (Phageshock_PspG) ISU63_03065 PF01207 Dihydrouridine synthase (Dus) ISU63_03070 PF01475 Ferric uptake regulator family ISU63_03075 PF01726 LexA DNA binding domain ISU63_03075 PF00717 Peptidase S24-like ISU63_03080 PF01219 Prokaryotic diacylglycerol kinase ISU63_03085 PF01553 Acyltransferase ISU63_03090 PF01040 UbiA prenyltransferase family ISU63_03095 PF04345 Chorismate lyase ISU63_03100 PF12951 Passenger-associated-transport-repeat ISU63_03105 PF01565 FAD binding domain ISU63_03105 PF08031 Berberine and berberine like ISU63_03120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_03125 PF13953 PapC C-terminal domain ISU63_03125 PF13954 PapC N-terminal domain ISU63_03125 PF00577 Outer membrane usher protein ISU63_03135 PF02342 TerD domain ISU63_03140 PF02342 TerD domain ISU63_03145 PF03741 Integral membrane protein TerC family ISU63_03150 PF05099 Tellurite resistance protein TerB ISU63_03155 PF02342 TerD domain ISU63_03160 PF02342 TerD domain ISU63_03180 PF11202 Phosphoribosyl transferase (PRTase) ISU63_03180 PF15608 PELOTA RNA binding domain ISU63_03200 PF04055 Radical SAM superfamily ISU63_03205 PF06228 Haem utilisation ChuX/HutX ISU63_03210 PF13460 NAD(P)H-binding ISU63_03220 PF00593 TonB dependent receptor ISU63_03220 PF07715 TonB-dependent Receptor Plug Domain ISU63_03225 PF05171 Haemin-degrading HemS.ChuX domain ISU63_03230 PF01497 Periplasmic binding protein ISU63_03235 PF01032 FecCD transport family ISU63_03240 PF00005 ABC transporter ISU63_03245 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU63_03250 PF03222 Tryptophan/tyrosine permease family ISU63_03255 PF03466 LysR substrate binding domain ISU63_03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_03260 PF01206 Sulfurtransferase TusA ISU63_03265 PF04143 Sulphur transport ISU63_03270 PF01312 FlhB HrpN YscU SpaS Family ISU63_03275 PF01311 Bacterial export proteins, family 1 ISU63_03280 PF01313 Bacterial export proteins, family 3 ISU63_03285 PF00813 FliP family ISU63_03290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU63_03305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU63_03305 PF18269 T3SS EscN ATPase C-terminal domain ISU63_03310 PF00771 FHIPEP family ISU63_03325 PF01514 Secretory protein of YscJ/FliF family ISU63_03360 PF03958 Bacterial type II/III secretion system short domain ISU63_03360 PF00263 Bacterial type II and III secretion system protein ISU63_03365 PF00512 His Kinase A (phospho-acceptor) domain ISU63_03365 PF00672 HAMP domain ISU63_03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_03365 PF00072 Response regulator receiver domain ISU63_03365 PF01627 Hpt domain ISU63_03365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU63_03370 PF00196 Bacterial regulatory proteins, luxR family ISU63_03370 PF00072 Response regulator receiver domain ISU63_03375 PF00375 Sodium:dicarboxylate symporter family ISU63_03380 PF00501 AMP-binding enzyme ISU63_03380 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU63_03380 PF13193 AMP-binding enzyme C-terminal domain ISU63_03385 PF04341 Protein of unknown function, DUF485 ISU63_03390 PF00474 Sodium:solute symporter family ISU63_03400 PF02796 Helix-turn-helix domain of resolvase ISU63_03400 PF00665 Integrase core domain ISU63_03405 PF01695 IstB-like ATP binding protein ISU63_03410 PF00501 AMP-binding enzyme ISU63_03410 PF08242 Methyltransferase domain ISU63_03410 PF00550 Phosphopantetheine attachment site ISU63_03410 PF00668 Condensation domain ISU63_03415 PF00501 AMP-binding enzyme ISU63_03415 PF13193 AMP-binding enzyme C-terminal domain ISU63_03415 PF00668 Condensation domain ISU63_03420 PF00668 Condensation domain ISU63_03420 PF08242 Methyltransferase domain ISU63_03420 PF00550 Phosphopantetheine attachment site ISU63_03420 PF00501 AMP-binding enzyme ISU63_03435 PF00975 Thioesterase domain ISU63_03445 PF00005 ABC transporter ISU63_03445 PF08021 Siderophore-interacting FAD-binding domain ISU63_03445 PF00664 ABC transporter transmembrane region ISU63_03445 PF04954 Siderophore-interacting protein ISU63_03450 PF00664 ABC transporter transmembrane region ISU63_03450 PF00005 ABC transporter ISU63_03465 PF02447 GntP family permease ISU63_03475 PF12951 Passenger-associated-transport-repeat ISU63_03480 PF04717 Type VI secretion system, phage-baseplate injector ISU63_03490 PF05593 RHS Repeat ISU63_03490 PF03527 RHS protein ISU63_03505 PF00939 Sodium:sulfate symporter transmembrane region ISU63_03510 PF00356 Bacterial regulatory proteins, lacI family ISU63_03530 PF07715 TonB-dependent Receptor Plug Domain ISU63_03530 PF00593 TonB dependent receptor ISU63_03535 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU63_03540 PF06276 Ferric iron reductase FhuF-like transporter ISU63_03540 PF04183 IucA / IucC family ISU63_03575 PF03472 Autoinducer binding domain ISU63_03575 PF00196 Bacterial regulatory proteins, luxR family ISU63_03580 PF00765 Autoinducer synthase ISU63_03585 PF02517 CPBP intramembrane metalloprotease ISU63_03610 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU63_03625 PF00691 OmpA family ISU63_03625 PF05736 OprF membrane domain ISU63_03635 PF07724 AAA domain (Cdc48 subfamily) ISU63_03635 PF17871 AAA lid domain ISU63_03635 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_03635 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_03640 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU63_03640 PF04717 Type VI secretion system, phage-baseplate injector ISU63_03640 PF13296 Putative type VI secretion system Rhs element Vgr ISU63_03700 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU63_03700 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU63_03700 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU63_03705 PF13407 Periplasmic binding protein domain ISU63_03710 PF00005 ABC transporter ISU63_03715 PF02653 Branched-chain amino acid transport system / permease component ISU63_03720 PF07715 TonB-dependent Receptor Plug Domain ISU63_03730 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU63_03730 PF01464 Transglycosylase SLT domain ISU63_03735 PF04362 Bacterial Fe(2+) trafficking ISU63_03740 PF14815 NUDIX domain ISU63_03740 PF00633 Helix-hairpin-helix motif ISU63_03740 PF10576 Iron-sulfur binding domain of endonuclease III ISU63_03740 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU63_03745 PF02390 Putative methyltransferase ISU63_03750 PF04320 Protein with unknown function (DUF469) ISU63_03755 PF01797 Transposase IS200 like ISU63_03760 PF04960 Glutaminase ISU63_03765 PF11101 Protein of unknown function (DUF2884) ISU63_03770 PF11101 Protein of unknown function (DUF2884) ISU63_03775 PF11713 Peptidase C80 family ISU63_03775 PF12146 Serine aminopeptidase, S33 ISU63_03775 PF11647 Membrane Localization Domain ISU63_03775 PF16671 Actin cross-linking domain ISU63_03775 PF07634 RtxA repeat ISU63_03780 PF04055 Radical SAM superfamily ISU63_03780 PF06969 HemN C-terminal domain ISU63_03785 PF01725 Ham1 family ISU63_03790 PF02594 Uncharacterised ACR, YggU family COG1872 ISU63_03795 PF02325 YGGT family ISU63_03800 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU63_03800 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU63_03805 PF01168 Alanine racemase, N-terminal domain ISU63_03810 PF00437 Type II/IV secretion system protein ISU63_03815 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU63_03820 PF00795 Carbon-nitrogen hydrolase ISU63_03825 PF03652 Holliday junction resolvase ISU63_03830 PF02622 Uncharacterized ACR, COG1678 ISU63_03835 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU63_03835 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU63_03840 PF04452 RNA methyltransferase ISU63_03845 PF04231 Endonuclease I ISU63_03850 PF17283 SprT-like zinc ribbon domain ISU63_03850 PF10263 SprT-like family ISU63_03855 PF02772 S-adenosylmethionine synthetase, central domain ISU63_03855 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU63_03855 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU63_03860 PF17944 Arginine decarboxylase C-terminal helical extension ISU63_03860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU63_03860 PF17810 Arginine decarboxylase helical bundle domain ISU63_03875 PF01435 Peptidase family M48 ISU63_03880 PF02779 Transketolase, pyrimidine binding domain ISU63_03880 PF02780 Transketolase, C-terminal domain ISU63_03880 PF00456 Transketolase, thiamine diphosphate binding domain ISU63_03890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU63_03890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU63_03895 PF00162 Phosphoglycerate kinase ISU63_03900 PF01116 Fructose-bisphosphate aldolase class-II ISU63_03910 PF05552 Conserved TM helix ISU63_03910 PF00924 Mechanosensitive ion channel ISU63_03920 PF04402 Protein of unknown function (DUF541) ISU63_03925 PF03466 LysR substrate binding domain ISU63_03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_03930 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU63_03935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU63_03935 PF01842 ACT domain ISU63_03935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU63_03945 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU63_03955 PF05164 Cell division protein ZapA ISU63_03960 PF03695 Uncharacterised protein family (UPF0149) ISU63_03965 PF05195 Aminopeptidase P, N-terminal domain ISU63_03965 PF00557 Metallopeptidase family M24 ISU63_03970 PF01494 FAD binding domain ISU63_03975 PF01494 FAD binding domain ISU63_03980 PF01571 Aminomethyltransferase folate-binding domain ISU63_03980 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU63_03985 PF01597 Glycine cleavage H-protein ISU63_03990 PF02347 Glycine cleavage system P-protein ISU63_04020 PF03006 Haemolysin-III related ISU63_04030 PF01571 Aminomethyltransferase folate-binding domain ISU63_04035 PF03937 Flavinator of succinate dehydrogenase ISU63_04040 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU63_04045 PF00072 Response regulator receiver domain ISU63_04045 PF00486 Transcriptional regulatory protein, C terminal ISU63_04050 PF00672 HAMP domain ISU63_04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_04050 PF00512 His Kinase A (phospho-acceptor) domain ISU63_04055 PF06123 Inner membrane protein CreD ISU63_04060 PF00258 Flavodoxin ISU63_04065 PF00589 Phage integrase family ISU63_04065 PF02899 Phage integrase, N-terminal SAM-like domain ISU63_04070 PF10411 Disulfide bond isomerase protein N-terminus ISU63_04070 PF13098 Thioredoxin-like domain ISU63_04075 PF02272 DHHA1 domain ISU63_04075 PF01368 DHH family ISU63_04075 PF17768 RecJ OB domain ISU63_04085 PF01336 OB-fold nucleic acid binding domain ISU63_04085 PF00152 tRNA synthetases class II (D, K and N) ISU63_04095 PF00589 Phage integrase family ISU63_04095 PF14659 Phage integrase, N-terminal SAM-like domain ISU63_04095 PF13356 Arm DNA-binding domain ISU63_04115 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU63_04120 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU63_04210 PF03551 Transcriptional regulator PadR-like family ISU63_04215 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU63_04225 PF13407 Periplasmic binding protein domain ISU63_04230 PF02653 Branched-chain amino acid transport system / permease component ISU63_04235 PF00005 ABC transporter ISU63_04240 PF00005 ABC transporter ISU63_04240 PF17912 MalK OB fold domain ISU63_04245 PF13416 Bacterial extracellular solute-binding protein ISU63_04250 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_04255 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_04260 PF07745 Glycosyl hydrolase family 53 ISU63_04265 PF08533 Beta-galactosidase C-terminal domain ISU63_04265 PF08532 Beta-galactosidase trimerisation domain ISU63_04265 PF02449 Beta-galactosidase ISU63_04270 PF02378 Phosphotransferase system, EIIC ISU63_04270 PF00367 phosphotransferase system, EIIB ISU63_04275 PF02264 LamB porin ISU63_04280 PF00356 Bacterial regulatory proteins, lacI family ISU63_04285 PF16338 Domain of unknown function (DUF4968) ISU63_04285 PF17137 Domain of unknown function (DUF5110) ISU63_04285 PF13802 Galactose mutarotase-like ISU63_04285 PF01055 Glycosyl hydrolases family 31 ISU63_04290 PF07690 Major Facilitator Superfamily ISU63_04295 PF00356 Bacterial regulatory proteins, lacI family ISU63_04305 PF01116 Fructose-bisphosphate aldolase class-II ISU63_04315 PF00884 Sulfatase ISU63_04320 PF13186 Iron-sulfur cluster-binding domain ISU63_04320 PF04055 Radical SAM superfamily ISU63_04325 PF07470 Glycosyl Hydrolase Family 88 ISU63_04335 PF01979 Amidohydrolase family ISU63_04340 PF03610 PTS system fructose IIA component ISU63_04345 PF03613 PTS system mannose/fructose/sorbose family IID component ISU63_04350 PF03609 PTS system sorbose-specific iic component ISU63_04355 PF03830 PTS system sorbose subfamily IIB component ISU63_04360 PF01380 SIS domain ISU63_04365 PF08013 Tagatose 6 phosphate kinase ISU63_04370 PF08220 DeoR-like helix-turn-helix domain ISU63_04370 PF00455 DeoR C terminal sensor domain ISU63_04375 PF00884 Sulfatase ISU63_04380 PF01797 Transposase IS200 like ISU63_04385 PF00665 Integrase core domain ISU63_04385 PF02796 Helix-turn-helix domain of resolvase ISU63_04390 PF01695 IstB-like ATP binding protein ISU63_04395 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU63_04395 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU63_04395 PF09093 Lyase, catalytic ISU63_04395 PF09092 Lyase, N terminal ISU63_04415 PF00484 Carbonic anhydrase ISU63_04430 PF03958 Bacterial type II/III secretion system short domain ISU63_04430 PF00263 Bacterial type II and III secretion system protein ISU63_04435 PF00437 Type II/IV secretion system protein ISU63_04445 PF08334 Type II secretion system (T2SS), protein G ISU63_04445 PF07963 Prokaryotic N-terminal methylation motif ISU63_04455 PF07963 Prokaryotic N-terminal methylation motif ISU63_04455 PF02501 Type II secretion system (T2SS), protein I ISU63_04460 PF11612 Type II secretion system (T2SS), protein J ISU63_04460 PF07963 Prokaryotic N-terminal methylation motif ISU63_04480 PF06750 Bacterial Peptidase A24 N-terminal domain ISU63_04480 PF01478 Type IV leader peptidase family ISU63_04500 PF00672 HAMP domain ISU63_04500 PF02203 Tar ligand binding domain homologue ISU63_04500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU63_04515 PF03466 LysR substrate binding domain ISU63_04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_04520 PF07690 Major Facilitator Superfamily ISU63_04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_04525 PF03466 LysR substrate binding domain ISU63_04530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU63_04530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU63_04535 PF00356 Bacterial regulatory proteins, lacI family ISU63_04540 PF01568 Molydopterin dinucleotide binding domain ISU63_04540 PF00384 Molybdopterin oxidoreductase ISU63_04550 PF07690 Major Facilitator Superfamily ISU63_04565 PF00248 Aldo/keto reductase family ISU63_04570 PF02976 DNA mismatch repair enzyme MutH ISU63_04575 PF00293 NUDIX domain ISU63_04580 PF05524 PEP-utilising enzyme, N-terminal ISU63_04580 PF00391 PEP-utilising enzyme, mobile domain ISU63_04580 PF02896 PEP-utilising enzyme, TIM barrel domain ISU63_04580 PF01590 GAF domain ISU63_04585 PF01790 Prolipoprotein diacylglyceryl transferase ISU63_04590 PF00303 Thymidylate synthase ISU63_04615 PF17946 RecC C-terminal domain ISU63_04620 PF05193 Peptidase M16 inactive domain ISU63_04620 PF00675 Insulinase (Peptidase family M16) ISU63_04620 PF16187 Middle or third domain of peptidase_M16 ISU63_04625 PF12705 PD-(D/E)XK nuclease superfamily ISU63_04625 PF13361 UvrD-like helicase C-terminal domain ISU63_04625 PF00580 UvrD/REP helicase N-terminal domain ISU63_04630 PF13538 UvrD-like helicase C-terminal domain ISU63_04635 PF00696 Amino acid kinase family ISU63_04635 PF00583 Acetyltransferase (GNAT) family ISU63_04640 PF01520 N-acetylmuramoyl-L-alanine amidase ISU63_04640 PF11741 AMIN domain ISU63_04655 PF06725 3D domain ISU63_04655 PF03562 MltA specific insert domain ISU63_04660 PF00899 ThiF family ISU63_04665 PF02657 Fe-S metabolism associated domain ISU63_04670 PF00266 Aminotransferase class-V ISU63_04680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_04680 PF03466 LysR substrate binding domain ISU63_04685 PF04241 Protein of unknown function (DUF423) ISU63_04690 PF01728 FtsJ-like methyltransferase ISU63_04690 PF18125 RlmM ferredoxin-like domain ISU63_04695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU63_04695 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU63_04700 PF11892 Domain of unknown function (DUF3412) ISU63_04700 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU63_04700 PF03641 Possible lysine decarboxylase ISU63_04705 PF14489 QueF-like protein ISU63_04705 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU63_04710 PF07348 Syd protein (SUKH-2) ISU63_04715 PF01797 Transposase IS200 like ISU63_04720 PF04287 tRNA pseudouridine synthase C ISU63_04725 PF00849 RNA pseudouridylate synthase ISU63_04730 PF00258 Flavodoxin ISU63_04735 PF11944 Protein of unknown function (DUF3461) ISU63_04745 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU63_04745 PF14602 Hexapeptide repeat of succinyl-transferase ISU63_04745 PF00132 Bacterial transferase hexapeptide (six repeats) ISU63_04750 PF01842 ACT domain ISU63_04750 PF08335 GlnD PII-uridylyltransferase ISU63_04750 PF01966 HD domain ISU63_04750 PF01909 Nucleotidyltransferase domain ISU63_04755 PF00557 Metallopeptidase family M24 ISU63_04760 PF00318 Ribosomal protein S2 ISU63_04765 PF00889 Elongation factor TS ISU63_04770 PF00696 Amino acid kinase family ISU63_04775 PF01765 Ribosome recycling factor ISU63_04780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU63_04780 PF13288 DXP reductoisomerase C-terminal domain ISU63_04780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU63_04785 PF01255 Putative undecaprenyl diphosphate synthase ISU63_04795 PF02163 Peptidase family M50 ISU63_04795 PF17820 PDZ domain ISU63_04800 PF07244 Surface antigen variable number repeat ISU63_04800 PF01103 Surface antigen ISU63_04805 PF03938 Outer membrane protein (OmpH-like) ISU63_04810 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU63_04810 PF00132 Bacterial transferase hexapeptide (six repeats) ISU63_04815 PF07977 FabA-like domain ISU63_04820 PF00132 Bacterial transferase hexapeptide (six repeats) ISU63_04820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU63_04825 PF02684 Lipid-A-disaccharide synthetase ISU63_04830 PF01351 Ribonuclease HII ISU63_04835 PF01336 OB-fold nucleic acid binding domain ISU63_04835 PF02811 PHP domain ISU63_04835 PF14579 Helix-hairpin-helix motif ISU63_04835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU63_04835 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU63_04840 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU63_04845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU63_04850 PF01171 PP-loop family ISU63_04850 PF11734 TilS substrate C-terminal domain ISU63_04850 PF09179 TilS substrate binding domain ISU63_04855 PF00034 Cytochrome c ISU63_04860 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU63_04865 PF06786 Uncharacterised protein family (UPF0253) ISU63_04870 PF07152 YaeQ protein ISU63_04875 PF00472 RF-1 domain ISU63_04880 PF17185 NlpE C-terminal OB domain ISU63_04880 PF04170 NlpE N-terminal domain ISU63_04885 PF04073 Aminoacyl-tRNA editing domain ISU63_04885 PF03129 Anticodon binding domain ISU63_04885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU63_04890 PF18389 TrmO C-terminal domain ISU63_04890 PF01980 tRNA-methyltransferase O ISU63_04895 PF16358 RcsF lipoprotein ISU63_04900 PF03180 NLPA lipoprotein ISU63_04905 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_04910 PF09383 NIL domain ISU63_04910 PF00005 ABC transporter ISU63_04945 PF00248 Aldo/keto reductase family ISU63_04955 PF03372 Endonuclease/Exonuclease/phosphatase family ISU63_04960 PF01464 Transglycosylase SLT domain ISU63_04960 PF01476 LysM domain ISU63_04965 PF00753 Metallo-beta-lactamase superfamily ISU63_04965 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU63_04970 PF08241 Methyltransferase domain ISU63_04975 PF00075 RNase H ISU63_04980 PF00929 Exonuclease ISU63_04990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU63_05000 PF01695 IstB-like ATP binding protein ISU63_05005 PF00665 Integrase core domain ISU63_05005 PF02796 Helix-turn-helix domain of resolvase ISU63_05015 PF05973 Phage derived protein Gp49-like (DUF891) ISU63_05065 PF13356 Arm DNA-binding domain ISU63_05065 PF00589 Phage integrase family ISU63_05080 PF01668 SmpB protein ISU63_05085 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU63_05090 PF03658 RnfH family Ubiquitin ISU63_05095 PF04355 SmpA / OmlA family ISU63_05100 PF02463 RecF/RecN/SMC N terminal domain ISU63_05105 PF01513 ATP-NAD kinase ISU63_05110 PF01025 GrpE ISU63_05115 PF00285 Citrate synthase, C-terminal domain ISU63_05120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU63_05125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU63_05130 PF02910 Fumarate reductase flavoprotein C-term ISU63_05130 PF00890 FAD binding domain ISU63_05135 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU63_05140 PF00676 Dehydrogenase E1 component ISU63_05140 PF16078 2-oxoglutarate dehydrogenase N-terminus ISU63_05140 PF16870 2-oxoglutarate dehydrogenase C-terminal ISU63_05140 PF02779 Transketolase, pyrimidine binding domain ISU63_05145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU63_05145 PF00364 Biotin-requiring enzyme ISU63_05145 PF02817 e3 binding domain ISU63_05150 PF08442 ATP-grasp domain ISU63_05150 PF00549 CoA-ligase ISU63_05155 PF02629 CoA binding domain ISU63_05155 PF00549 CoA-ligase ISU63_05160 PF01654 Cytochrome bd terminal oxidase subunit I ISU63_05165 PF02322 Cytochrome bd terminal oxidase subunit II ISU63_05170 PF08173 Membrane bound YbgT-like protein ISU63_05175 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU63_05180 PF03061 Thioesterase superfamily ISU63_05185 PF01618 MotA/TolQ/ExbB proton channel family ISU63_05190 PF02472 Biopolymer transport protein ExbD/TolR ISU63_05195 PF06519 TolA C-terminal ISU63_05195 PF06519 TolA C-terminal ISU63_05200 PF04052 TolB amino-terminal domain ISU63_05200 PF07676 WD40-like Beta Propeller Repeat ISU63_05205 PF00691 OmpA family ISU63_05210 PF13174 Tetratricopeptide repeat ISU63_05210 PF16331 TolA binding protein trimerisation ISU63_05230 PF02445 Quinolinate synthetase A protein ISU63_05235 PF04973 Nicotinamide mononucleotide transporter ISU63_05240 PF01545 Cation efflux family ISU63_05245 PF00793 DAHP synthetase I family ISU63_05250 PF00300 Histidine phosphatase superfamily (branch 1) ISU63_05260 PF01263 Aldose 1-epimerase ISU63_05270 PF10509 Galactokinase galactose-binding signature ISU63_05270 PF08544 GHMP kinases C terminal ISU63_05270 PF00288 GHMP kinases N terminal domain ISU63_05275 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU63_05275 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU63_05280 PF16363 GDP-mannose 4,6 dehydratase ISU63_05290 PF00005 ABC transporter ISU63_05295 PF03459 TOBE domain ISU63_05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_05300 PF10766 Multidrug efflux pump-associated protein AcrZ ISU63_05310 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_05315 PF00005 ABC transporter ISU63_05315 PF03459 TOBE domain ISU63_05325 PF10282 Lactonase, 7-bladed beta-propeller ISU63_05330 PF00202 Aminotransferase class-III ISU63_05335 PF06968 Biotin and Thiamin Synthesis associated domain ISU63_05335 PF04055 Radical SAM superfamily ISU63_05340 PF00155 Aminotransferase class I and II ISU63_05345 PF08241 Methyltransferase domain ISU63_05355 PF09383 NIL domain ISU63_05355 PF00005 ABC transporter ISU63_05360 PF17757 UvrB interaction domain ISU63_05360 PF04851 Type III restriction enzyme, res subunit ISU63_05360 PF02151 UvrB/uvrC motif ISU63_05360 PF00271 Helicase conserved C-terminal domain ISU63_05360 PF12344 Ultra-violet resistance protein B ISU63_05365 PF09905 DNA-binding protein VF530 ISU63_05370 PF01933 Uncharacterised protein family UPF0052 ISU63_05375 PF06463 Molybdenum Cofactor Synthesis C ISU63_05375 PF04055 Radical SAM superfamily ISU63_05380 PF01967 MoaC family ISU63_05385 PF02597 ThiS family ISU63_05390 PF02391 MoaE protein ISU63_05395 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU63_05400 PF01797 Transposase IS200 like ISU63_05405 PF00732 GMC oxidoreductase ISU63_05405 PF05199 GMC oxidoreductase ISU63_05410 PF00171 Aldehyde dehydrogenase family ISU63_05415 PF13977 BetI-type transcriptional repressor, C-terminal ISU63_05415 PF00440 Bacterial regulatory proteins, tetR family ISU63_05420 PF02028 BCCT, betaine/carnitine/choline family transporter ISU63_05425 PF03466 LysR substrate binding domain ISU63_05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_05435 PF01048 Phosphorylase superfamily ISU63_05455 PF13801 Heavy-metal resistance ISU63_05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_05460 PF00512 His Kinase A (phospho-acceptor) domain ISU63_05465 PF00072 Response regulator receiver domain ISU63_05465 PF02954 Bacterial regulatory protein, Fis family ISU63_05465 PF00158 Sigma-54 interaction domain ISU63_05470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU63_05475 PF03466 LysR substrate binding domain ISU63_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_05500 PF00005 ABC transporter ISU63_05505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_05510 PF00440 Bacterial regulatory proteins, tetR family ISU63_05510 PF09209 Tetracyclin repressor-like, C-terminal domain ISU63_05515 PF00271 Helicase conserved C-terminal domain ISU63_05515 PF00270 DEAD/DEAH box helicase ISU63_05550 PF00872 Transposase, Mutator family ISU63_05565 PF08543 Phosphomethylpyrimidine kinase ISU63_05585 PF00781 Diacylglycerol kinase catalytic domain ISU63_05590 PF16325 Peptidase family U32 C-terminal domain ISU63_05590 PF01136 Peptidase family U32 ISU63_05595 PF07411 Domain of unknown function (DUF1508) ISU63_05600 PF00072 Response regulator receiver domain ISU63_05600 PF00486 Transcriptional regulatory protein, C terminal ISU63_05610 PF07690 Major Facilitator Superfamily ISU63_05615 PF00873 AcrB/AcrD/AcrF family ISU63_05620 PF00873 AcrB/AcrD/AcrF family ISU63_05625 PF13533 Biotin-lipoyl like ISU63_05630 PF08402 TOBE domain ISU63_05630 PF00005 ABC transporter ISU63_05635 PF00155 Aminotransferase class I and II ISU63_05635 PF00392 Bacterial regulatory proteins, gntR family ISU63_05640 PF00202 Aminotransferase class-III ISU63_05650 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_05655 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_05660 PF00012 Hsp70 protein ISU63_05665 PF01769 Divalent cation transporter ISU63_05665 PF03448 MgtE intracellular N domain ISU63_05665 PF00571 CBS domain ISU63_05675 PF02541 Ppx/GppA phosphatase family ISU63_05680 PF13089 Polyphosphate kinase N-terminal domain ISU63_05680 PF17941 Polyphosphate kinase C-terminal domain 1 ISU63_05680 PF02503 Polyphosphate kinase middle domain ISU63_05680 PF13090 Polyphosphate kinase C-terminal domain 2 ISU63_05685 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_05690 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_05695 PF00005 ABC transporter ISU63_05705 PF13302 Acetyltransferase (GNAT) domain ISU63_05710 PF00551 Formyl transferase ISU63_05715 PF02769 AIR synthase related protein, C-terminal domain ISU63_05715 PF00586 AIR synthase related protein, N-terminal domain ISU63_05725 PF01797 Transposase IS200 like ISU63_05730 PF00308 Bacterial dnaA protein ISU63_05735 PF03960 ArsC family ISU63_05740 PF07720 Tetratricopeptide repeat ISU63_05740 PF01435 Peptidase family M48 ISU63_05745 PF01594 AI-2E family transporter ISU63_05755 PF00578 AhpC/TSA family ISU63_05760 PF01842 ACT domain ISU63_05765 PF00701 Dihydrodipicolinate synthetase family ISU63_05770 PF06804 NlpB/DapX lipoprotein ISU63_05775 PF01797 Transposase IS200 like ISU63_05780 PF01259 SAICAR synthetase ISU63_05785 PF04228 Putative neutral zinc metallopeptidase ISU63_05790 PF04284 Protein of unknown function (DUF441) ISU63_05795 PF17176 tRNA-binding domain ISU63_05795 PF05127 Helicase ISU63_05795 PF13718 GNAT acetyltransferase 2 ISU63_05795 PF08351 Domain of unknown function (DUF1726) ISU63_05800 PF13980 Uncharacterised protein family (UPF0370) ISU63_05805 PF02557 D-alanyl-D-alanine carboxypeptidase ISU63_05810 PF07687 Peptidase dimerisation domain ISU63_05810 PF01546 Peptidase family M20/M25/M40 ISU63_05815 PF03960 ArsC family ISU63_05830 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_05835 PF00005 ABC transporter ISU63_05835 PF08402 TOBE domain ISU63_05845 PF00884 Sulfatase ISU63_05850 PF13186 Iron-sulfur cluster-binding domain ISU63_05850 PF04055 Radical SAM superfamily ISU63_05855 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU63_05865 PF00873 AcrB/AcrD/AcrF family ISU63_05875 PF00196 Bacterial regulatory proteins, luxR family ISU63_05875 PF00072 Response regulator receiver domain ISU63_05880 PF00037 4Fe-4S binding domain ISU63_05880 PF13187 4Fe-4S dicluster domain ISU63_05880 PF12800 4Fe-4S binding domain ISU63_05885 PF03927 NapD protein ISU63_05890 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU63_05890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU63_05890 PF01568 Molydopterin dinucleotide binding domain ISU63_05890 PF00384 Molybdopterin oxidoreductase ISU63_05895 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU63_05900 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU63_05905 PF00293 NUDIX domain ISU63_05910 PF00390 Malic enzyme, N-terminal domain ISU63_05910 PF03949 Malic enzyme, NAD binding domain ISU63_05910 PF01515 Phosphate acetyl/butaryl transferase ISU63_05915 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU63_05920 PF01218 Coproporphyrinogen III oxidase ISU63_05925 PF00583 Acetyltransferase (GNAT) family ISU63_05935 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU63_05935 PF03797 Autotransporter beta-domain ISU63_05935 PF03212 Pertactin ISU63_05935 PF13018 Extended Signal Peptide of Type V secretion system ISU63_05940 PF04076 Bacterial OB fold (BOF) protein ISU63_05945 PF06572 Protein of unknown function (DUF1131) ISU63_05950 PF04261 Dyp-type peroxidase family ISU63_05955 PF00701 Dihydrodipicolinate synthetase family ISU63_05960 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU63_05965 PF12468 Type III secretion system leucine rich repeat protein ISU63_05970 PF00480 ROK family ISU63_05975 PF04074 YhcH/YjgK/YiaL ISU63_05980 PF01380 SIS domain ISU63_05980 PF01418 Helix-turn-helix domain, rpiR family ISU63_05985 PF07690 Major Facilitator Superfamily ISU63_05995 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_06000 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_06005 PF00005 ABC transporter ISU63_06010 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_06020 PF00072 Response regulator receiver domain ISU63_06020 PF00486 Transcriptional regulatory protein, C terminal ISU63_06025 PF00512 His Kinase A (phospho-acceptor) domain ISU63_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_06025 PF00672 HAMP domain ISU63_06035 PF00155 Aminotransferase class I and II ISU63_06045 PF00557 Metallopeptidase family M24 ISU63_06055 PF00474 Sodium:solute symporter family ISU63_06060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU63_06060 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_06065 PF00005 ABC transporter ISU63_06065 PF02687 FtsX-like permease family ISU63_06065 PF12704 MacB-like periplasmic core domain ISU63_06070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_06075 PF00072 Response regulator receiver domain ISU63_06075 PF00486 Transcriptional regulatory protein, C terminal ISU63_06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_06080 PF00512 His Kinase A (phospho-acceptor) domain ISU63_06080 PF00672 HAMP domain ISU63_06080 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU63_06085 PF01695 IstB-like ATP binding protein ISU63_06090 PF00665 Integrase core domain ISU63_06090 PF02796 Helix-turn-helix domain of resolvase ISU63_06100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU63_06105 PF05524 PEP-utilising enzyme, N-terminal ISU63_06105 PF00391 PEP-utilising enzyme, mobile domain ISU63_06105 PF02896 PEP-utilising enzyme, TIM barrel domain ISU63_06110 PF00381 PTS HPr component phosphorylation site ISU63_06115 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_06125 PF04354 ZipA, C-terminal FtsZ-binding domain ISU63_06130 PF03120 NAD-dependent DNA ligase OB-fold domain ISU63_06130 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU63_06130 PF12826 Helix-hairpin-helix motif ISU63_06130 PF01653 NAD-dependent DNA ligase adenylation domain ISU63_06130 PF00533 BRCA1 C Terminus (BRCT) domain ISU63_06135 PF12843 Putative quorum-sensing-regulated virulence factor ISU63_06160 PF01797 Transposase IS200 like ISU63_06165 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU63_06200 PF01773 Na+ dependent nucleoside transporter N-terminus ISU63_06200 PF07662 Na+ dependent nucleoside transporter C-terminus ISU63_06200 PF07670 Nucleoside recognition ISU63_06205 PF01566 Natural resistance-associated macrophage protein ISU63_06215 PF00248 Aldo/keto reductase family ISU63_06220 PF03466 LysR substrate binding domain ISU63_06220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_06230 PF02685 Glucokinase ISU63_06235 PF07350 Protein of unknown function (DUF1479) ISU63_06240 PF00155 Aminotransferase class I and II ISU63_06245 PF01292 Prokaryotic cytochrome b561 ISU63_06255 PF03783 Curli production assembly/transport component CsgG ISU63_06265 PF05643 Putative bacterial lipoprotein (DUF799) ISU63_06275 PF02613 Nitrate reductase delta subunit ISU63_06280 PF04976 DMSO reductase anchor subunit (DmsC) ISU63_06285 PF13247 4Fe-4S dicluster domain ISU63_06285 PF12800 4Fe-4S binding domain ISU63_06290 PF01568 Molydopterin dinucleotide binding domain ISU63_06290 PF00384 Molybdopterin oxidoreductase ISU63_06290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU63_06300 PF05638 Type VI secretion system effector, Hcp ISU63_06310 PF00005 ABC transporter ISU63_06315 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_06325 PF13406 Transglycosylase SLT domain ISU63_06370 PF05947 Type VI secretion system, TssF ISU63_06375 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_06375 PF07724 AAA domain (Cdc48 subfamily) ISU63_06375 PF17871 AAA lid domain ISU63_06375 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_06380 PF16970 Type-1 fimbrial protein, A ISU63_06385 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_06385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_06390 PF00577 Outer membrane usher protein ISU63_06390 PF13953 PapC C-terminal domain ISU63_06390 PF13954 PapC N-terminal domain ISU63_06395 PF00872 Transposase, Mutator family ISU63_06405 PF03831 PhnA domain ISU63_06405 PF08274 PhnA Zinc-Ribbon ISU63_06415 PF04011 LemA family ISU63_06430 PF00005 ABC transporter ISU63_06435 PF03379 CcmB protein ISU63_06440 PF01578 Cytochrome C assembly protein ISU63_06445 PF04995 Heme exporter protein D (CcmD) ISU63_06450 PF03100 CcmE ISU63_06455 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU63_06455 PF01578 Cytochrome C assembly protein ISU63_06460 PF08534 Redoxin ISU63_06465 PF03918 Cytochrome C biogenesis protein ISU63_06470 PF03918 Cytochrome C biogenesis protein ISU63_06475 PF04333 MlaA lipoprotein ISU63_06480 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU63_06485 PF04175 Protein of unknown function (DUF406) ISU63_06490 PF02803 Thiolase, C-terminal domain ISU63_06490 PF00108 Thiolase, N-terminal domain ISU63_06495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU63_06495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU63_06495 PF00378 Enoyl-CoA hydratase/isomerase ISU63_06500 PF00300 Histidine phosphatase superfamily (branch 1) ISU63_06505 PF01713 Smr domain ISU63_06510 PF05175 Methyltransferase small domain ISU63_06515 PF01264 Chorismate synthase ISU63_06520 PF03411 Penicillin-insensitive murein endopeptidase ISU63_06525 PF01925 Sulfite exporter TauE/SafE ISU63_06530 PF04315 Elongation factor P hydroxylase ISU63_06535 PF08891 YfcL protein ISU63_06540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU63_06540 PF01266 FAD dependent oxidoreductase ISU63_06545 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU63_06545 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU63_06550 PF01177 Asp/Glu/Hydantoin racemase ISU63_06555 PF00419 Fimbrial protein ISU63_06565 PF00892 EamA-like transporter family ISU63_06575 PF11890 Domain of unknown function (DUF3410) ISU63_06575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU63_06575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU63_06580 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU63_06580 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU63_06585 PF01416 tRNA pseudouridine synthase ISU63_06590 PF09335 SNARE associated Golgi protein ISU63_06595 PF17848 Acetyl-coA carboxylase zinc finger domain ISU63_06595 PF01039 Carboxyl transferase domain ISU63_06600 PF08245 Mur ligase middle domain ISU63_06600 PF02875 Mur ligase family, glutamate ligase domain ISU63_06605 PF05036 Sporulation related domain ISU63_06610 PF02674 Colicin V production protein ISU63_06615 PF00156 Phosphoribosyl transferase domain ISU63_06620 PF02441 Flavoprotein ISU63_06625 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_06630 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_06635 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_06640 PF00005 ABC transporter ISU63_06645 PF01370 NAD dependent epimerase/dehydratase family ISU63_06645 PF08338 Domain of unknown function (DUF1731) ISU63_06655 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU63_06660 PF00293 NUDIX domain ISU63_06665 PF03611 PTS system sugar-specific permease component ISU63_06670 PF00872 Transposase, Mutator family ISU63_06680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU63_06685 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU63_06685 PF00356 Bacterial regulatory proteins, lacI family ISU63_06690 PF01515 Phosphate acetyl/butaryl transferase ISU63_06690 PF07085 DRTGG domain ISU63_06695 PF00871 Acetokinase family ISU63_06700 PF04217 Protein of unknown function, DUF412 ISU63_06705 PF03887 YfbU domain ISU63_06710 PF13419 Haloacid dehalogenase-like hydrolase ISU63_06715 PF02080 TrkA-C domain ISU63_06715 PF03600 Citrate transporter ISU63_06730 PF00155 Aminotransferase class I and II ISU63_06735 PF03466 LysR substrate binding domain ISU63_06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_06740 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU63_06745 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU63_06750 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU63_06750 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU63_06760 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU63_06760 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU63_06760 PF10531 SLBB domain ISU63_06765 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU63_06765 PF01568 Molydopterin dinucleotide binding domain ISU63_06765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU63_06765 PF00384 Molybdopterin oxidoreductase ISU63_06770 PF00146 NADH dehydrogenase ISU63_06775 PF12838 4Fe-4S dicluster domain ISU63_06780 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU63_06785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU63_06790 PF00361 Proton-conducting membrane transporter ISU63_06790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU63_06795 PF00361 Proton-conducting membrane transporter ISU63_06800 PF00361 Proton-conducting membrane transporter ISU63_06810 PF04074 YhcH/YjgK/YiaL ISU63_06815 PF01202 Shikimate kinase ISU63_06820 PF00106 short chain dehydrogenase ISU63_06825 PF02638 Glycosyl hydrolase-like 10 ISU63_06830 PF00356 Bacterial regulatory proteins, lacI family ISU63_06835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU63_06835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU63_06840 PF07690 Major Facilitator Superfamily ISU63_06845 PF03928 Haem-degrading ISU63_06850 PF00920 Dehydratase family ISU63_06855 PF05957 Bacterial protein of unknown function (DUF883) ISU63_06865 PF00425 chorismate binding enzyme ISU63_06870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU63_06870 PF16582 Middle domain of thiamine pyrophosphate ISU63_06870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU63_06875 PF12697 Alpha/beta hydrolase family ISU63_06880 PF00378 Enoyl-CoA hydratase/isomerase ISU63_06885 PF13378 Enolase C-terminal domain-like ISU63_06890 PF13193 AMP-binding enzyme C-terminal domain ISU63_06890 PF00501 AMP-binding enzyme ISU63_06895 PF02885 Glycosyl transferase family, helical bundle domain ISU63_06900 PF07338 Protein of unknown function (DUF1471) ISU63_06905 PF05971 RNA methyltransferase ISU63_06915 PF01695 IstB-like ATP binding protein ISU63_06920 PF02796 Helix-turn-helix domain of resolvase ISU63_06920 PF00665 Integrase core domain ISU63_06925 PF08447 PAS fold ISU63_06925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU63_06925 PF13426 PAS domain ISU63_06930 PF00005 ABC transporter ISU63_06935 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_06940 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_06950 PF00210 Ferritin-like domain ISU63_06955 PF13649 Methyltransferase domain ISU63_06965 PF00892 EamA-like transporter family ISU63_06970 PF13505 Outer membrane protein beta-barrel domain ISU63_06990 PF00107 Zinc-binding dehydrogenase ISU63_06990 PF08240 Alcohol dehydrogenase GroES-like domain ISU63_06995 PF13407 Periplasmic binding protein domain ISU63_07000 PF00005 ABC transporter ISU63_07005 PF02653 Branched-chain amino acid transport system / permease component ISU63_07010 PF00356 Bacterial regulatory proteins, lacI family ISU63_07015 PF03466 LysR substrate binding domain ISU63_07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_07020 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU63_07030 PF02028 BCCT, betaine/carnitine/choline family transporter ISU63_07040 PF00175 Oxidoreductase NAD-binding domain ISU63_07040 PF00970 Oxidoreductase FAD-binding domain ISU63_07040 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU63_07045 PF08479 POTRA domain, ShlB-type ISU63_07045 PF17287 POTRA domain ISU63_07045 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU63_07050 PF05860 haemagglutination activity domain ISU63_07050 PF13332 Hemagglutinin repeat ISU63_07050 PF04829 Pre-toxin domain with VENN motif ISU63_07050 PF13018 Extended Signal Peptide of Type V secretion system ISU63_07090 PF05860 haemagglutination activity domain ISU63_07090 PF15526 Novel toxin 21 ISU63_07090 PF04829 Pre-toxin domain with VENN motif ISU63_07090 PF13332 Hemagglutinin repeat ISU63_07090 PF05594 Haemagluttinin repeat ISU63_07100 PF00005 ABC transporter ISU63_07100 PF17912 MalK OB fold domain ISU63_07105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU63_07105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU63_07105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU63_07105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU63_07110 PF00356 Bacterial regulatory proteins, lacI family ISU63_07120 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_07125 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_07130 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU63_07150 PF00924 Mechanosensitive ion channel ISU63_07155 PF01867 CRISPR associated protein Cas1 ISU63_07165 PF09611 CRISPR-associated protein (Cas_Csy1) ISU63_07170 PF09614 CRISPR-associated protein (Cas_Csy2) ISU63_07175 PF09615 CRISPR-associated protein (Cas_Csy3) ISU63_07180 PF09618 CRISPR-associated protein (Cas_Csy4) ISU63_07185 PF00248 Aldo/keto reductase family ISU63_07195 PF00083 Sugar (and other) transporter ISU63_07205 PF03466 LysR substrate binding domain ISU63_07205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_07210 PF00196 Bacterial regulatory proteins, luxR family ISU63_07210 PF03472 Autoinducer binding domain ISU63_07215 PF00765 Autoinducer synthase ISU63_07230 PF12368 Rhodanase C-terminal ISU63_07230 PF00581 Rhodanese-like domain ISU63_07230 PF17773 UPF0176 acylphosphatase like domain ISU63_07235 PF01594 AI-2E family transporter ISU63_07245 PF00196 Bacterial regulatory proteins, luxR family ISU63_07250 PF01266 FAD dependent oxidoreductase ISU63_07255 PF00872 Transposase, Mutator family ISU63_07260 PF13991 BssS protein family ISU63_07265 PF06183 DinI-like family ISU63_07270 PF01979 Amidohydrolase family ISU63_07275 PF03992 Antibiotic biosynthesis monooxygenase ISU63_07285 PF00872 Transposase, Mutator family ISU63_07290 PF12111 Polyribonucleotide phosphorylase C terminal ISU63_07290 PF10150 Ribonuclease E/G family ISU63_07290 PF00575 S1 RNA binding domain ISU63_07295 PF00849 RNA pseudouridylate synthase ISU63_07295 PF01479 S4 domain ISU63_07300 PF02545 Maf-like protein ISU63_07305 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU63_07310 PF01783 Ribosomal L32p protein family ISU63_07315 PF02504 Fatty acid synthesis protein ISU63_07320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU63_07320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU63_07325 PF00698 Acyl transferase domain ISU63_07335 PF00550 Phosphopantetheine attachment site ISU63_07340 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU63_07340 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU63_07350 PF01063 Amino-transferase class IV ISU63_07355 PF02618 YceG-like family ISU63_07360 PF02223 Thymidylate kinase ISU63_07365 PF09115 DNA polymerase III, delta subunit, C terminal ISU63_07370 PF01026 TatD related DNase ISU63_07375 PF00367 phosphotransferase system, EIIB ISU63_07375 PF02378 Phosphotransferase system, EIIC ISU63_07385 PF08501 Shikimate dehydrogenase substrate binding domain ISU63_07390 PF01230 HIT domain ISU63_07395 PF07233 Protein of unknown function (DUF1425) ISU63_07400 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU63_07400 PF13036 Peptidoglycan-synthase activator LpoB ISU63_07405 PF01636 Phosphotransferase enzyme family ISU63_07410 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU63_07415 PF05728 Uncharacterised protein family (UPF0227) ISU63_07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_07435 PF00872 Transposase, Mutator family ISU63_07440 PF05433 Glycine zipper 2TM domain ISU63_07445 PF00271 Helicase conserved C-terminal domain ISU63_07445 PF03461 TRCF domain ISU63_07445 PF02559 CarD-like/TRCF domain ISU63_07445 PF00270 DEAD/DEAH box helicase ISU63_07445 PF17757 UvrB interaction domain ISU63_07450 PF12704 MacB-like periplasmic core domain ISU63_07450 PF02687 FtsX-like permease family ISU63_07455 PF00005 ABC transporter ISU63_07460 PF02687 FtsX-like permease family ISU63_07460 PF12704 MacB-like periplasmic core domain ISU63_07465 PF00480 ROK family ISU63_07470 PF00480 ROK family ISU63_07475 PF02146 Sir2 family ISU63_07480 PF07687 Peptidase dimerisation domain ISU63_07480 PF01546 Peptidase family M20/M25/M40 ISU63_07485 PF08007 Cupin superfamily protein ISU63_07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_07490 PF08918 PhoQ Sensor ISU63_07495 PF00486 Transcriptional regulatory protein, C terminal ISU63_07495 PF00072 Response regulator receiver domain ISU63_07505 PF08328 Adenylosuccinate lyase C-terminal ISU63_07505 PF00206 Lyase ISU63_07510 PF04356 Protein of unknown function (DUF489) ISU63_07520 PF00293 NUDIX domain ISU63_07525 PF00849 RNA pseudouridylate synthase ISU63_07530 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU63_07535 PF00356 Bacterial regulatory proteins, lacI family ISU63_07535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU63_07545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU63_07545 PF08447 PAS fold ISU63_07550 PF05368 NmrA-like family ISU63_07555 PF01638 HxlR-like helix-turn-helix ISU63_07565 PF00328 Histidine phosphatase superfamily (branch 2) ISU63_07570 PF14001 YdfZ protein ISU63_07580 PF01037 Lrp/AsnC ligand binding domain ISU63_07580 PF13404 AsnC-type helix-turn-helix domain ISU63_07590 PF10777 Inner membrane protein YlaC ISU63_07595 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU63_07595 PF00698 Acyl transferase domain ISU63_07595 PF00107 Zinc-binding dehydrogenase ISU63_07595 PF00550 Phosphopantetheine attachment site ISU63_07595 PF16197 Ketoacyl-synthetase C-terminal extension ISU63_07595 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU63_07595 PF14765 Polyketide synthase dehydratase ISU63_07595 PF08240 Alcohol dehydrogenase GroES-like domain ISU63_07595 PF08659 KR domain ISU63_07600 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU63_07600 PF00703 Glycosyl hydrolases family 2 ISU63_07600 PF16353 Domain of unknown function(DUF4981) ISU63_07600 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU63_07600 PF02929 Beta galactosidase small chain ISU63_07605 PF00313 'Cold-shock' DNA-binding domain ISU63_07610 PF10781 Dextransucrase DSRB ISU63_07620 PF02308 MgtC family ISU63_07625 PF00689 Cation transporting ATPase, C-terminus ISU63_07625 PF00690 Cation transporter/ATPase, N-terminus ISU63_07635 PF05280 Flagellar transcriptional activator (FlhC) ISU63_07640 PF01618 MotA/TolQ/ExbB proton channel family ISU63_07645 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU63_07645 PF00691 OmpA family ISU63_07650 PF01627 Hpt domain ISU63_07650 PF01584 CheW-like domain ISU63_07650 PF09078 CheY binding ISU63_07650 PF02895 Signal transducing histidine kinase, homodimeric domain ISU63_07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_07655 PF01584 CheW-like domain ISU63_07660 PF07690 Major Facilitator Superfamily ISU63_07665 PF01042 Endoribonuclease L-PSP ISU63_07675 PF13309 HTH domain ISU63_07675 PF08348 YheO-like PAS domain ISU63_07680 PF12951 Passenger-associated-transport-repeat ISU63_07695 PF00672 HAMP domain ISU63_07695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU63_07695 PF02203 Tar ligand binding domain homologue ISU63_07700 PF00672 HAMP domain ISU63_07700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU63_07700 PF02203 Tar ligand binding domain homologue ISU63_07705 PF01739 CheR methyltransferase, SAM binding domain ISU63_07705 PF03705 CheR methyltransferase, all-alpha domain ISU63_07710 PF01339 CheB methylesterase ISU63_07710 PF00072 Response regulator receiver domain ISU63_07715 PF00072 Response regulator receiver domain ISU63_07720 PF04344 Chemotaxis phosphatase, CheZ ISU63_07725 PF01510 N-acetylmuramoyl-L-alanine amidase ISU63_07730 PF13018 Extended Signal Peptide of Type V secretion system ISU63_07730 PF03895 YadA-like membrane anchor domain ISU63_07730 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU63_07730 PF05658 Head domain of trimeric autotransporter adhesin ISU63_07735 PF03895 YadA-like membrane anchor domain ISU63_07735 PF13018 Extended Signal Peptide of Type V secretion system ISU63_07735 PF05658 Head domain of trimeric autotransporter adhesin ISU63_07735 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU63_07745 PF01168 Alanine racemase, N-terminal domain ISU63_07745 PF00842 Alanine racemase, C-terminal domain ISU63_07770 PF01695 IstB-like ATP binding protein ISU63_07775 PF00665 Integrase core domain ISU63_07775 PF02796 Helix-turn-helix domain of resolvase ISU63_07785 PF07351 Protein of unknown function (DUF1480) ISU63_07800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_07800 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_07820 PF02470 MlaD protein ISU63_07825 PF04403 Paraquat-inducible protein A ISU63_07830 PF13185 GAF domain ISU63_07835 PF17516 ProQ C-terminal domain ISU63_07835 PF04352 ProQ/FINO family ISU63_07840 PF17804 Tail specific protease N-terminal domain ISU63_07840 PF03572 Peptidase family S41 ISU63_07840 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU63_07840 PF00595 PDZ domain ISU63_07845 PF01435 Peptidase family M48 ISU63_07850 PF00419 Fimbrial protein ISU63_07855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_07855 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_07860 PF13954 PapC N-terminal domain ISU63_07860 PF13953 PapC C-terminal domain ISU63_07860 PF00577 Outer membrane usher protein ISU63_07870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_07870 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_07875 PF07690 Major Facilitator Superfamily ISU63_07880 PF14583 Oligogalacturonate lyase ISU63_07885 PF09339 IclR helix-turn-helix domain ISU63_07885 PF01614 Bacterial transcriptional regulator ISU63_07890 PF01510 N-acetylmuramoyl-L-alanine amidase ISU63_07895 PF00375 Sodium:dicarboxylate symporter family ISU63_07900 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU63_07905 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU63_07910 PF01547 Bacterial extracellular solute-binding protein ISU63_07915 PF00005 ABC transporter ISU63_07915 PF17912 MalK OB fold domain ISU63_07915 PF03459 TOBE domain ISU63_07920 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_07925 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_07930 PF06917 Periplasmic pectate lyase ISU63_07940 PF04962 KduI/IolB family ISU63_07945 PF07883 Cupin domain ISU63_07950 PF00872 Transposase, Mutator family ISU63_07955 PF13419 Haloacid dehalogenase-like hydrolase ISU63_07960 PF14002 YniB-like protein ISU63_07965 PF03881 Fructosamine kinase ISU63_07975 PF00950 ABC 3 transport family ISU63_07980 PF00950 ABC 3 transport family ISU63_07985 PF00005 ABC transporter ISU63_07990 PF01297 Zinc-uptake complex component A periplasmic ISU63_07995 PF01464 Transglycosylase SLT domain ISU63_08000 PF01914 MarC family integral membrane protein ISU63_08010 PF13619 KTSC domain ISU63_08015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU63_08015 PF03129 Anticodon binding domain ISU63_08015 PF02824 TGS domain ISU63_08015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU63_08020 PF00707 Translation initiation factor IF-3, C-terminal domain ISU63_08020 PF05198 Translation initiation factor IF-3, N-terminal domain ISU63_08025 PF01632 Ribosomal protein L35 ISU63_08030 PF00453 Ribosomal protein L20 ISU63_08040 PF01409 tRNA synthetases class II core domain (F) ISU63_08040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU63_08045 PF01588 Putative tRNA binding domain ISU63_08045 PF03147 Ferredoxin-fold anticodon binding domain ISU63_08045 PF03484 tRNA synthetase B5 domain ISU63_08045 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU63_08045 PF03483 B3/4 domain ISU63_08050 PF00216 Bacterial DNA-binding protein ISU63_08060 PF01032 FecCD transport family ISU63_08065 PF00255 Glutathione peroxidase ISU63_08070 PF00005 ABC transporter ISU63_08075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU63_08080 PF00535 Glycosyl transferase family 2 ISU63_08085 PF01370 NAD dependent epimerase/dehydratase family ISU63_08085 PF00551 Formyl transferase ISU63_08085 PF02911 Formyl transferase, C-terminal domain ISU63_08090 PF01522 Polysaccharide deacetylase ISU63_08095 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU63_08100 PF00892 EamA-like transporter family ISU63_08115 PF00877 NlpC/P60 family ISU63_08120 PF10437 Bacterial lipoate protein ligase C-terminus ISU63_08120 PF03099 Biotin/lipoate A/B protein ligase family ISU63_08130 PF00793 DAHP synthetase I family ISU63_08135 PF03618 Kinase/pyrophosphorylase ISU63_08140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU63_08140 PF02896 PEP-utilising enzyme, TIM barrel domain ISU63_08140 PF00391 PEP-utilising enzyme, mobile domain ISU63_08150 PF01594 AI-2E family transporter ISU63_08155 PF02913 FAD linked oxidases, C-terminal domain ISU63_08155 PF13183 4Fe-4S dicluster domain ISU63_08155 PF01565 FAD binding domain ISU63_08160 PF03061 Thioesterase superfamily ISU63_08165 PF01521 Iron-sulphur cluster biosynthesis ISU63_08170 PF01458 Uncharacterized protein family (UPF0051) ISU63_08175 PF00005 ABC transporter ISU63_08180 PF01458 Uncharacterized protein family (UPF0051) ISU63_08185 PF00266 Aminotransferase class-V ISU63_08190 PF02657 Fe-S metabolism associated domain ISU63_08195 PF03734 L,D-transpeptidase catalytic domain ISU63_08195 PF01476 LysM domain ISU63_08195 PF17969 L,D-transpeptidase C-terminal domain ISU63_08205 PF01695 IstB-like ATP binding protein ISU63_08210 PF02796 Helix-turn-helix domain of resolvase ISU63_08210 PF00665 Integrase core domain ISU63_08215 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU63_08215 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU63_08220 PF04728 Lipoprotein leucine-zipper ISU63_08225 PF02887 Pyruvate kinase, alpha/beta domain ISU63_08225 PF00224 Pyruvate kinase, barrel domain ISU63_08240 PF01554 MatE ISU63_08250 PF00677 Lumazine binding domain ISU63_08260 PF07690 Major Facilitator Superfamily ISU63_08265 PF03466 LysR substrate binding domain ISU63_08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_08270 PF00356 Bacterial regulatory proteins, lacI family ISU63_08280 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU63_08280 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU63_08285 PF00877 NlpC/P60 family ISU63_08290 PF00462 Glutaredoxin ISU63_08300 PF00929 Exonuclease ISU63_08305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU63_08310 PF14431 YwqJ-like deaminase ISU63_08310 PF18807 Tripartite Tc toxins repeat ISU63_08315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU63_08320 PF00440 Bacterial regulatory proteins, tetR family ISU63_08320 PF16925 Tetracyclin repressor-like, C-terminal domain ISU63_08325 PF08019 Phosphoethanolamine transferase EptA/EptB ISU63_08325 PF00884 Sulfatase ISU63_08330 PF01047 MarR family ISU63_08335 PF05433 Glycine zipper 2TM domain ISU63_08340 PF03702 Anhydro-N-acetylmuramic acid kinase ISU63_08345 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU63_08350 PF01243 Pyridoxamine 5'-phosphate oxidase ISU63_08350 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU63_08355 PF01479 S4 domain ISU63_08355 PF00579 tRNA synthetases class I (W and Y) ISU63_08360 PF08543 Phosphomethylpyrimidine kinase ISU63_08365 PF02798 Glutathione S-transferase, N-terminal domain ISU63_08365 PF00043 Glutathione S-transferase, C-terminal domain ISU63_08370 PF11656 YjbD family (DUF3811) ISU63_08375 PF04893 Yip1 domain ISU63_08380 PF00854 POT family ISU63_08390 PF00005 ABC transporter ISU63_08395 PF00005 ABC transporter ISU63_08395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_08400 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_08400 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU63_08405 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_08410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_08420 PF02954 Bacterial regulatory protein, Fis family ISU63_08420 PF00158 Sigma-54 interaction domain ISU63_08425 PF04012 PspA/IM30 family ISU63_08430 PF06667 Phage shock protein B ISU63_08435 PF04024 PspC domain ISU63_08445 PF04317 YcjX-like family, DUF463 ISU63_08450 PF05128 Domain of unknown function (DUF697) ISU63_08455 PF08808 RES domain ISU63_08460 PF09722 Protein of unknown function (DUF2384) ISU63_08465 PF18024 Helix-turn-helix domain ISU63_08465 PF00158 Sigma-54 interaction domain ISU63_08470 PF01797 Transposase IS200 like ISU63_08475 PF08534 Redoxin ISU63_08480 PF13378 Enolase C-terminal domain-like ISU63_08480 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU63_08485 PF00246 Zinc carboxypeptidase ISU63_08490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_08495 PF01544 CorA-like Mg2+ transporter protein ISU63_08505 PF07859 alpha/beta hydrolase fold ISU63_08510 PF01171 PP-loop family ISU63_08515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU63_08515 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU63_08515 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU63_08515 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU63_08515 PF10371 Domain of unknown function ISU63_08520 PF00893 Small Multidrug Resistance protein ISU63_08525 PF02308 MgtC family ISU63_08530 PF03891 Domain of unknown function (DUF333) ISU63_08535 PF03724 META domain ISU63_08540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU63_08540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU63_08545 PF11739 Dicarboxylate transport ISU63_08550 PF13617 YnbE-like lipoprotein ISU63_08555 PF07027 Protein of unknown function (DUF1318) ISU63_08560 PF08125 Mannitol dehydrogenase C-terminal domain ISU63_08560 PF01232 Mannitol dehydrogenase Rossmann domain ISU63_08565 PF00325 Bacterial regulatory proteins, crp family ISU63_08565 PF04198 Putative sugar-binding domain ISU63_08570 PF02525 Flavodoxin-like fold ISU63_08575 PF04408 Helicase associated domain (HA2) ISU63_08575 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU63_08575 PF11898 Domain of unknown function (DUF3418) ISU63_08575 PF00271 Helicase conserved C-terminal domain ISU63_08575 PF00270 DEAD/DEAH box helicase ISU63_08590 PF00089 Trypsin ISU63_08620 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU63_08625 PF00672 HAMP domain ISU63_08625 PF00512 His Kinase A (phospho-acceptor) domain ISU63_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_08630 PF00072 Response regulator receiver domain ISU63_08630 PF00486 Transcriptional regulatory protein, C terminal ISU63_08640 PF13520 Amino acid permease ISU63_08645 PF07338 Protein of unknown function (DUF1471) ISU63_08650 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU63_08650 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU63_08650 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU63_08655 PF02233 NAD(P) transhydrogenase beta subunit ISU63_08660 PF00582 Universal stress protein family ISU63_08665 PF00027 Cyclic nucleotide-binding domain ISU63_08665 PF13545 Crp-like helix-turn-helix domain ISU63_08670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU63_08670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU63_08675 PF00245 Alkaline phosphatase ISU63_08685 PF13419 Haloacid dehalogenase-like hydrolase ISU63_08690 PF01842 ACT domain ISU63_08695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU63_08695 PF00205 Thiamine pyrophosphate enzyme, central domain ISU63_08695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU63_08725 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU63_08725 PF01048 Phosphorylase superfamily ISU63_08730 PF00005 ABC transporter ISU63_08735 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_08740 PF09084 NMT1/THI5 like ISU63_08755 PF00356 Bacterial regulatory proteins, lacI family ISU63_08760 PF00654 Voltage gated chloride channel ISU63_08770 PF00480 ROK family ISU63_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_08775 PF03466 LysR substrate binding domain ISU63_08780 PF07690 Major Facilitator Superfamily ISU63_08785 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU63_08790 PF10415 Fumarase C C-terminus ISU63_08790 PF00206 Lyase ISU63_08795 PF01238 Phosphomannose isomerase type I ISU63_08800 PF06097 Bacterial protein of unknown function (DUF945) ISU63_08810 PF13593 SBF-like CPA transporter family (DUF4137) ISU63_08815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU63_08815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU63_08820 PF12833 Helix-turn-helix domain ISU63_08820 PF02311 AraC-like ligand binding domain ISU63_08825 PF02653 Branched-chain amino acid transport system / permease component ISU63_08830 PF00005 ABC transporter ISU63_08835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU63_08840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_08845 PF11762 L-arabinose isomerase C-terminal domain ISU63_08845 PF02610 L-arabinose isomerase ISU63_08850 PF03412 Peptidase C39 family ISU63_08850 PF00664 ABC transporter transmembrane region ISU63_08850 PF00005 ABC transporter ISU63_08860 PF13533 Biotin-lipoyl like ISU63_08865 PF03412 Peptidase C39 family ISU63_08865 PF00664 ABC transporter transmembrane region ISU63_08865 PF00005 ABC transporter ISU63_08870 PF00005 ABC transporter ISU63_08870 PF00664 ABC transporter transmembrane region ISU63_08870 PF03412 Peptidase C39 family ISU63_08875 PF10754 Protein of unknown function (DUF2569) ISU63_08880 PF02508 Rnf-Nqr subunit, membrane protein ISU63_08885 PF04060 Putative Fe-S cluster ISU63_08890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU63_08890 PF13237 4Fe-4S dicluster domain ISU63_08890 PF13375 RnfC Barrel sandwich hybrid domain ISU63_08890 PF10531 SLBB domain ISU63_08895 PF12833 Helix-turn-helix domain ISU63_08895 PF06445 GyrI-like small molecule binding domain ISU63_08900 PF03116 NQR2, RnfD, RnfE family ISU63_08905 PF04205 FMN-binding domain ISU63_08910 PF02508 Rnf-Nqr subunit, membrane protein ISU63_08915 PF10576 Iron-sulfur binding domain of endonuclease III ISU63_08915 PF00633 Helix-hairpin-helix motif ISU63_08915 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU63_08920 PF01370 NAD dependent epimerase/dehydratase family ISU63_08925 PF07690 Major Facilitator Superfamily ISU63_08930 PF00773 RNB domain ISU63_08930 PF00575 S1 RNA binding domain ISU63_08930 PF17876 Cold shock domain ISU63_08930 PF08206 Ribonuclease B OB domain ISU63_08935 PF02554 Carbon starvation protein CstA ISU63_08935 PF13722 5TM C-terminal transporter carbon starvation CstA ISU63_08940 PF04328 Selenoprotein, putative ISU63_08945 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU63_08955 PF00596 Class II Aldolase and Adducin N-terminal domain ISU63_08960 PF05433 Glycine zipper 2TM domain ISU63_08965 PF01253 Translation initiation factor SUI1 ISU63_08970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU63_08980 PF18073 Rubredoxin metal binding domain ISU63_08985 PF06305 Lipopolysaccharide assembly protein A domain ISU63_08990 PF01569 PAP2 superfamily ISU63_08995 PF00925 GTP cyclohydrolase II ISU63_09000 PF00694 Aconitase C-terminal domain ISU63_09000 PF00330 Aconitase family (aconitate hydratase) ISU63_09010 PF03466 LysR substrate binding domain ISU63_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_09015 PF01131 DNA topoisomerase ISU63_09015 PF01751 Toprim domain ISU63_09015 PF01396 Topoisomerase DNA binding C4 zinc finger ISU63_09015 PF08272 Topoisomerase I zinc-ribbon-like ISU63_09025 PF10692 Protein of unknown function (DUF2498) ISU63_09030 PF08496 Peptidase family S49 N-terminal ISU63_09030 PF01343 Peptidase family S49 ISU63_09035 PF00106 short chain dehydrogenase ISU63_09040 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU63_09045 PF00849 RNA pseudouridylate synthase ISU63_09045 PF01479 S4 domain ISU63_09050 PF01300 Telomere recombination ISU63_09055 PF02811 PHP domain ISU63_09065 PF00425 chorismate binding enzyme ISU63_09065 PF04715 Anthranilate synthase component I, N terminal region ISU63_09070 PF00117 Glutamine amidotransferase class-I ISU63_09075 PF00591 Glycosyl transferase family, a/b domain ISU63_09075 PF02885 Glycosyl transferase family, helical bundle domain ISU63_09080 PF00218 Indole-3-glycerol phosphate synthase ISU63_09080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU63_09085 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_09090 PF00290 Tryptophan synthase alpha chain ISU63_09100 PF03922 OmpW family ISU63_09125 PF04279 Intracellular septation protein A ISU63_09130 PF03061 Thioesterase superfamily ISU63_09135 PF00872 Transposase, Mutator family ISU63_09140 PF03544 Gram-negative bacterial TonB protein C-terminal ISU63_09145 PF03795 YCII-related domain ISU63_09160 PF13505 Outer membrane protein beta-barrel domain ISU63_09175 PF13091 PLD-like domain ISU63_09175 PF13396 Phospholipase_D-nuclease N-terminal ISU63_09180 PF04269 Protein of unknown function, DUF440 ISU63_09190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_09190 PF00005 ABC transporter ISU63_09195 PF00005 ABC transporter ISU63_09195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_09200 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_09200 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU63_09205 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_09210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_09215 PF01914 MarC family integral membrane protein ISU63_09220 PF00171 Aldehyde dehydrogenase family ISU63_09220 PF00465 Iron-containing alcohol dehydrogenase ISU63_09225 PF02796 Helix-turn-helix domain of resolvase ISU63_09225 PF00665 Integrase core domain ISU63_09230 PF01695 IstB-like ATP binding protein ISU63_09235 PF00265 Thymidine kinase ISU63_09240 PF00816 H-NS histone family ISU63_09245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU63_09245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU63_09245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU63_09250 PF00072 Response regulator receiver domain ISU63_09255 PF02810 SEC-C motif ISU63_09260 PF01842 ACT domain ISU63_09260 PF00551 Formyl transferase ISU63_09265 PF00872 Transposase, Mutator family ISU63_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_09285 PF03466 LysR substrate binding domain ISU63_09290 PF03372 Endonuclease/Exonuclease/phosphatase family ISU63_09295 PF00293 NUDIX domain ISU63_09300 PF07383 Protein of unknown function (DUF1496) ISU63_09305 PF01751 Toprim domain ISU63_09305 PF01131 DNA topoisomerase ISU63_09310 PF02769 AIR synthase related protein, C-terminal domain ISU63_09310 PF00586 AIR synthase related protein, N-terminal domain ISU63_09315 PF00881 Nitroreductase family ISU63_09320 PF01343 Peptidase family S49 ISU63_09325 PF17763 Glutaminase/Asparaginase C-terminal domain ISU63_09325 PF00710 Asparaginase, N-terminal ISU63_09330 PF00857 Isochorismatase family ISU63_09335 PF07023 Protein of unknown function (DUF1315) ISU63_09340 PF01641 SelR domain ISU63_09345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU63_09345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU63_09350 PF01263 Aldose 1-epimerase ISU63_09355 PF06629 MltA-interacting protein MipA ISU63_09360 PF06798 PrkA serine protein kinase C-terminal domain ISU63_09360 PF08298 PrkA AAA domain ISU63_09365 PF04285 Protein of unknown function (DUF444) ISU63_09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_09375 PF03466 LysR substrate binding domain ISU63_09380 PF05726 Pirin C-terminal cupin domain ISU63_09380 PF02678 Pirin ISU63_09385 PF07690 Major Facilitator Superfamily ISU63_09390 PF01266 FAD dependent oxidoreductase ISU63_09395 PF04293 SpoVR like protein ISU63_09400 PF07840 FadR C-terminal domain ISU63_09400 PF00392 Bacterial regulatory proteins, gntR family ISU63_09405 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ISU63_09410 PF02600 Disulfide bond formation protein DsbB ISU63_09425 PF00266 Aminotransferase class-V ISU63_09435 PF00872 Transposase, Mutator family ISU63_09440 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU63_09595 PF00872 Transposase, Mutator family ISU63_09660 PF06530 Phage antitermination protein Q ISU63_09670 PF05772 NinB protein ISU63_09685 PF01695 IstB-like ATP binding protein ISU63_09690 PF00665 Integrase core domain ISU63_09690 PF02796 Helix-turn-helix domain of resolvase ISU63_09695 PF00589 Phage integrase family ISU63_09695 PF12167 Arm DNA-binding domain ISU63_09700 PF03692 Putative zinc- or iron-chelating domain ISU63_09705 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU63_09710 PF13406 Transglycosylase SLT domain ISU63_09715 PF05166 YcgL domain ISU63_09720 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU63_09720 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU63_09725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU63_09730 PF03776 Septum formation topological specificity factor MinE ISU63_09735 PF01612 3'-5' exonuclease ISU63_09735 PF00570 HRDC domain ISU63_09740 PF00501 AMP-binding enzyme ISU63_09740 PF13193 AMP-binding enzyme C-terminal domain ISU63_09750 PF03843 Outer membrane lipoprotein Slp family ISU63_09755 PF00814 Glycoprotease family ISU63_09760 PF13307 Helicase C-terminal domain ISU63_09760 PF04851 Type III restriction enzyme, res subunit ISU63_09765 PF01042 Endoribonuclease L-PSP ISU63_09770 PF00893 Small Multidrug Resistance protein ISU63_09775 PF00893 Small Multidrug Resistance protein ISU63_09780 PF01081 KDPG and KHG aldolase ISU63_09785 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU63_09785 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU63_09790 PF01418 Helix-turn-helix domain, rpiR family ISU63_09790 PF01380 SIS domain ISU63_09795 PF02887 Pyruvate kinase, alpha/beta domain ISU63_09795 PF00224 Pyruvate kinase, barrel domain ISU63_09805 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU63_09810 PF01476 LysM domain ISU63_09810 PF08525 Opacity-associated protein A N-terminal motif ISU63_09810 PF01551 Peptidase family M23 ISU63_09815 PF01297 Zinc-uptake complex component A periplasmic ISU63_09820 PF00005 ABC transporter ISU63_09825 PF00950 ABC 3 transport family ISU63_09830 PF17864 RuvB AAA lid domain ISU63_09830 PF05491 RuvB C-terminal winged helix domain ISU63_09830 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU63_09835 PF07499 RuvA, C-terminal domain ISU63_09835 PF01330 RuvA N terminal domain ISU63_09840 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU63_09845 PF01709 Transcriptional regulator ISU63_09850 PF00293 NUDIX domain ISU63_09855 PF00152 tRNA synthetases class II (D, K and N) ISU63_09855 PF02938 GAD domain ISU63_09855 PF01336 OB-fold nucleic acid binding domain ISU63_09860 PF01904 Protein of unknown function DUF72 ISU63_09865 PF01124 MAPEG family ISU63_09870 PF13649 Methyltransferase domain ISU63_09875 PF08003 Protein of unknown function (DUF1698) ISU63_09880 PF03932 CutC family ISU63_09885 PF06185 YecM protein ISU63_09890 PF00750 tRNA synthetases class I (R) ISU63_09890 PF03485 Arginyl tRNA synthetase N terminal domain ISU63_09890 PF05746 DALR anticodon binding domain ISU63_09900 PF08479 POTRA domain, ShlB-type ISU63_09900 PF17287 POTRA domain ISU63_09900 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU63_09905 PF03023 Lipid II flippase MurJ ISU63_09910 PF04337 Protein of unknown function, DUF480 ISU63_09915 PF13302 Acetyltransferase (GNAT) domain ISU63_09920 PF07690 Major Facilitator Superfamily ISU63_09925 PF07273 Protein of unknown function (DUF1439) ISU63_09930 PF02613 Nitrate reductase delta subunit ISU63_09935 PF02811 PHP domain ISU63_09945 PF00480 ROK family ISU63_09945 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU63_09950 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU63_09965 PF00005 ABC transporter ISU63_09965 PF08402 TOBE domain ISU63_09970 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_09975 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_09985 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU63_09995 PF00916 Sulfate permease family ISU63_09995 PF01740 STAS domain ISU63_10000 PF00793 DAHP synthetase I family ISU63_10005 PF13369 Transglutaminase-like superfamily ISU63_10010 PF04247 Invasion gene expression up-regulator, SirB ISU63_10015 PF13847 Methyltransferase domain ISU63_10015 PF17827 PrmC N-terminal domain ISU63_10020 PF00472 RF-1 domain ISU63_10020 PF03462 PCRF domain ISU63_10025 PF01488 Shikimate / quinate 5-dehydrogenase ISU63_10025 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU63_10025 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU63_10030 PF03550 Outer membrane lipoprotein LolB ISU63_10035 PF00288 GHMP kinases N terminal domain ISU63_10035 PF08544 GHMP kinases C terminal ISU63_10040 PF14572 Phosphoribosyl synthetase-associated domain ISU63_10040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU63_10045 PF10762 Protein of unknown function (DUF2583) ISU63_10050 PF01195 Peptidyl-tRNA hydrolase ISU63_10055 PF06071 Protein of unknown function (DUF933) ISU63_10055 PF01926 50S ribosome-binding GTPase ISU63_10095 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU63_10100 PF00486 Transcriptional regulatory protein, C terminal ISU63_10100 PF00072 Response regulator receiver domain ISU63_10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_10105 PF00512 His Kinase A (phospho-acceptor) domain ISU63_10105 PF00672 HAMP domain ISU63_10150 PF08242 Methyltransferase domain ISU63_10170 PF00872 Transposase, Mutator family ISU63_10215 PF01370 NAD dependent epimerase/dehydratase family ISU63_10220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU63_10220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU63_10225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU63_10225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU63_10235 PF05962 HutD ISU63_10240 PF01979 Amidohydrolase family ISU63_10245 PF00392 Bacterial regulatory proteins, gntR family ISU63_10245 PF07702 UTRA domain ISU63_10250 PF01979 Amidohydrolase family ISU63_10265 PF01695 IstB-like ATP binding protein ISU63_10270 PF02796 Helix-turn-helix domain of resolvase ISU63_10270 PF00665 Integrase core domain ISU63_10280 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU63_10285 PF04996 Succinylarginine dihydrolase ISU63_10290 PF00171 Aldehyde dehydrogenase family ISU63_10295 PF04958 Arginine N-succinyltransferase beta subunit ISU63_10300 PF00202 Aminotransferase class-III ISU63_10305 PF00392 Bacterial regulatory proteins, gntR family ISU63_10305 PF00155 Aminotransferase class I and II ISU63_10315 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU63_10315 PF07730 Histidine kinase ISU63_10315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_10315 PF00672 HAMP domain ISU63_10320 PF01699 Sodium/calcium exchanger protein ISU63_10325 PF02562 PhoH-like protein ISU63_10340 PF13994 PgaD-like protein ISU63_10345 PF00535 Glycosyl transferase family 2 ISU63_10350 PF01522 Polysaccharide deacetylase ISU63_10350 PF14883 Hypothetical glycosyl hydrolase family 13 ISU63_10360 PF00557 Metallopeptidase family M24 ISU63_10365 PF03848 Tellurite resistance protein TehB ISU63_10365 PF09313 Domain of unknown function (DUF1971) ISU63_10375 PF00578 AhpC/TSA family ISU63_10380 PF00005 ABC transporter ISU63_10380 PF02687 FtsX-like permease family ISU63_10380 PF12704 MacB-like periplasmic core domain ISU63_10400 PF10634 Fe2+ transport protein ISU63_10405 PF03239 Iron permease FTR1 family ISU63_10420 PF04960 Glutaminase ISU63_10430 PF08220 DeoR-like helix-turn-helix domain ISU63_10430 PF00455 DeoR C terminal sensor domain ISU63_10435 PF00324 Amino acid permease ISU63_10440 PF00155 Aminotransferase class I and II ISU63_10445 PF02508 Rnf-Nqr subunit, membrane protein ISU63_10455 PF04909 Amidohydrolase ISU63_10460 PF07690 Major Facilitator Superfamily ISU63_10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_10475 PF03466 LysR substrate binding domain ISU63_10480 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU63_10485 PF01575 MaoC like domain ISU63_10490 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISU63_10490 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISU63_10495 PF00072 Response regulator receiver domain ISU63_10495 PF00196 Bacterial regulatory proteins, luxR family ISU63_10500 PF00512 His Kinase A (phospho-acceptor) domain ISU63_10500 PF00989 PAS fold ISU63_10500 PF00072 Response regulator receiver domain ISU63_10500 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_10500 PF01627 Hpt domain ISU63_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_10510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_10510 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_10515 PF00577 Outer membrane usher protein ISU63_10515 PF13953 PapC C-terminal domain ISU63_10515 PF13954 PapC N-terminal domain ISU63_10525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_10525 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_10535 PF13356 Arm DNA-binding domain ISU63_10535 PF00589 Phage integrase family ISU63_10540 PF00425 chorismate binding enzyme ISU63_10545 PF07690 Major Facilitator Superfamily ISU63_10550 PF00664 ABC transporter transmembrane region ISU63_10550 PF00005 ABC transporter ISU63_10555 PF00664 ABC transporter transmembrane region ISU63_10555 PF00005 ABC transporter ISU63_10555 PF08021 Siderophore-interacting FAD-binding domain ISU63_10555 PF04954 Siderophore-interacting protein ISU63_10565 PF00550 Phosphopantetheine attachment site ISU63_10565 PF08242 Methyltransferase domain ISU63_10565 PF00668 Condensation domain ISU63_10565 PF00501 AMP-binding enzyme ISU63_10570 PF00698 Acyl transferase domain ISU63_10570 PF00550 Phosphopantetheine attachment site ISU63_10570 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU63_10570 PF16197 Ketoacyl-synthetase C-terminal extension ISU63_10570 PF00668 Condensation domain ISU63_10570 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU63_10580 PF00975 Thioesterase domain ISU63_10585 PF00501 AMP-binding enzyme ISU63_10585 PF13193 AMP-binding enzyme C-terminal domain ISU63_10590 PF07715 TonB-dependent Receptor Plug Domain ISU63_10590 PF00593 TonB dependent receptor ISU63_10625 PF01695 IstB-like ATP binding protein ISU63_10630 PF00665 Integrase core domain ISU63_10630 PF02796 Helix-turn-helix domain of resolvase ISU63_10650 PF00005 ABC transporter ISU63_10650 PF08402 TOBE domain ISU63_10655 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_10660 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_10670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU63_10670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU63_10675 PF00392 Bacterial regulatory proteins, gntR family ISU63_10675 PF07702 UTRA domain ISU63_10745 PF05638 Type VI secretion system effector, Hcp ISU63_10790 PF01066 CDP-alcohol phosphatidyltransferase ISU63_10795 PF02151 UvrB/uvrC motif ISU63_10795 PF08459 UvrC Helix-hairpin-helix N-terminal ISU63_10795 PF01541 GIY-YIG catalytic domain ISU63_10800 PF00072 Response regulator receiver domain ISU63_10800 PF00196 Bacterial regulatory proteins, luxR family ISU63_10805 PF10769 Protein of unknown function (DUF2594) ISU63_10810 PF06942 GlpM protein ISU63_10820 PF13505 Outer membrane protein beta-barrel domain ISU63_10830 PF00324 Amino acid permease ISU63_10835 PF01344 Kelch motif ISU63_10840 PF03358 NADPH-dependent FMN reductase ISU63_10845 PF04261 Dyp-type peroxidase family ISU63_10850 PF09375 Imelysin ISU63_10850 PF13473 Cupredoxin-like domain ISU63_10855 PF03239 Iron permease FTR1 family ISU63_10860 PF00474 Sodium:solute symporter family ISU63_10870 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU63_10870 PF00171 Aldehyde dehydrogenase family ISU63_10870 PF01619 Proline dehydrogenase ISU63_10870 PF14850 DNA-binding domain of Proline dehydrogenase ISU63_10885 PF00005 ABC transporter ISU63_10890 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_10895 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_10900 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_10905 PF02899 Phage integrase, N-terminal SAM-like domain ISU63_10910 PF04545 Sigma-70, region 4 ISU63_10910 PF04539 Sigma-70 region 3 ISU63_10910 PF04542 Sigma-70 region 2 ISU63_10915 PF00700 Bacterial flagellin C-terminal helical region ISU63_10915 PF08884 Flagellin D3 domain ISU63_10915 PF00669 Bacterial flagellin N-terminal helical region ISU63_10920 PF02465 Flagellar hook-associated protein 2 N-terminus ISU63_10920 PF07196 Flagellin hook IN motif ISU63_10920 PF07195 Flagellar hook-associated protein 2 C-terminus ISU63_10925 PF02561 Flagellar protein FliS ISU63_10930 PF05400 Flagellar protein FliT ISU63_10935 PF12833 Helix-turn-helix domain ISU63_10940 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU63_10940 PF00672 HAMP domain ISU63_10940 PF02743 Cache domain ISU63_10945 PF01966 HD domain ISU63_10950 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU63_10970 PF02049 Flagellar hook-basal body complex protein FliE ISU63_10975 PF01514 Secretory protein of YscJ/FliF family ISU63_10975 PF08345 Flagellar M-ring protein C-terminal ISU63_10985 PF02108 Flagellar assembly protein FliH ISU63_10990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU63_10990 PF18269 T3SS EscN ATPase C-terminal domain ISU63_10995 PF02050 Flagellar FliJ protein ISU63_11000 PF02120 Flagellar hook-length control protein FliK ISU63_11005 PF03748 Flagellar basal body-associated protein FliL ISU63_11010 PF02154 Flagellar motor switch protein FliM ISU63_11010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU63_11015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU63_11015 PF16973 Flagellar motor switch protein FliN N-terminal ISU63_11020 PF04347 Flagellar biosynthesis protein, FliO ISU63_11025 PF00813 FliP family ISU63_11030 PF01313 Bacterial export proteins, family 3 ISU63_11035 PF01311 Bacterial export proteins, family 1 ISU63_11050 PF00294 pfkB family carbohydrate kinase ISU63_11055 PF02653 Branched-chain amino acid transport system / permease component ISU63_11060 PF00005 ABC transporter ISU63_11065 PF13407 Periplasmic binding protein domain ISU63_11070 PF02653 Branched-chain amino acid transport system / permease component ISU63_11075 PF00596 Class II Aldolase and Adducin N-terminal domain ISU63_11080 PF04198 Putative sugar-binding domain ISU63_11085 PF00669 Bacterial flagellin N-terminal helical region ISU63_11090 PF00460 Flagella basal body rod protein ISU63_11090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_11095 PF10135 Rod binding protein ISU63_11095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU63_11100 PF02119 Flagellar P-ring protein ISU63_11105 PF02107 Flagellar L-ring protein ISU63_11120 PF07559 Flagellar basal body protein FlaE ISU63_11120 PF00460 Flagella basal body rod protein ISU63_11120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_11125 PF13861 FlgD Tudor-like domain ISU63_11125 PF13860 FlgD Ig-like domain ISU63_11125 PF03963 Flagellar hook capping protein - N-terminal region ISU63_11130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_11130 PF00460 Flagella basal body rod protein ISU63_11135 PF00460 Flagella basal body rod protein ISU63_11140 PF17656 FlgA N-terminal domain ISU63_11140 PF13144 Chaperone for flagella basal body P-ring formation ISU63_11145 PF04316 Anti-sigma-28 factor, FlgM ISU63_11150 PF05130 FlgN protein ISU63_11170 PF06366 Flagellar protein FlhE ISU63_11175 PF00771 FHIPEP family ISU63_11180 PF01312 FlhB HrpN YscU SpaS Family ISU63_11195 PF10709 Protein of unknown function (DUF2511) ISU63_11205 PF04234 CopC domain ISU63_11210 PF00210 Ferritin-like domain ISU63_11215 PF06440 DNA polymerase III, theta subunit ISU63_11220 PF00561 alpha/beta hydrolase fold ISU63_11225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU63_11225 PF00326 Prolyl oligopeptidase family ISU63_11230 PF13995 YebF-like protein ISU63_11235 PF04266 ASCH domain ISU63_11240 PF07130 YebG protein ISU63_11245 PF00271 Helicase conserved C-terminal domain ISU63_11245 PF03880 DbpA RNA binding domain ISU63_11245 PF00270 DEAD/DEAH box helicase ISU63_11250 PF02222 ATP-grasp domain ISU63_11255 PF03701 Uncharacterised protein family (UPF0181) ISU63_11260 PF00425 chorismate binding enzyme ISU63_11260 PF04715 Anthranilate synthase component I, N terminal region ISU63_11265 PF00293 NUDIX domain ISU63_11270 PF03315 Serine dehydratase beta chain ISU63_11270 PF03313 Serine dehydratase alpha chain ISU63_11275 PF01613 Flavin reductase like domain ISU63_11280 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU63_11280 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU63_11290 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU63_11295 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU63_11300 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU63_11305 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU63_11310 PF00171 Aldehyde dehydrogenase family ISU63_11315 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU63_11320 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU63_11325 PF01047 MarR family ISU63_11330 PF03741 Integral membrane protein TerC family ISU63_11330 PF03471 Transporter associated domain ISU63_11335 PF03610 PTS system fructose IIA component ISU63_11335 PF03830 PTS system sorbose subfamily IIB component ISU63_11340 PF03609 PTS system sorbose-specific iic component ISU63_11345 PF03613 PTS system mannose/fructose/sorbose family IID component ISU63_11350 PF06173 Protein of unknown function (DUF986) ISU63_11355 PF02659 Putative manganese efflux pump ISU63_11360 PF07715 TonB-dependent Receptor Plug Domain ISU63_11360 PF00593 TonB dependent receptor ISU63_11375 PF13847 Methyltransferase domain ISU63_11380 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU63_11385 PF00313 'Cold-shock' DNA-binding domain ISU63_11390 PF10736 Protein of unknown function (DUF2627) ISU63_11395 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU63_11400 PF00324 Amino acid permease ISU63_11415 PF13974 YebO-like protein ISU63_11420 PF13998 MgrB protein ISU63_11425 PF13996 YobH-like protein ISU63_11430 PF10964 Protein of unknown function (DUF2766) ISU63_11435 PF12833 Helix-turn-helix domain ISU63_11445 PF00664 ABC transporter transmembrane region ISU63_11445 PF00005 ABC transporter ISU63_11460 PF06167 Glucose-regulated metallo-peptidase M90 ISU63_11470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU63_11470 PF00356 Bacterial regulatory proteins, lacI family ISU63_11475 PF01695 IstB-like ATP binding protein ISU63_11480 PF00665 Integrase core domain ISU63_11480 PF02796 Helix-turn-helix domain of resolvase ISU63_11490 PF00872 Transposase, Mutator family ISU63_11495 PF01306 LacY proton/sugar symporter ISU63_11500 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU63_11500 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU63_11510 PF01648 4'-phosphopantetheinyl transferase superfamily ISU63_11510 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU63_11515 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU63_11525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU63_11530 PF00196 Bacterial regulatory proteins, luxR family ISU63_11530 PF00072 Response regulator receiver domain ISU63_11540 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU63_11550 PF01522 Polysaccharide deacetylase ISU63_11560 PF01554 MatE ISU63_11565 PF00764 Arginosuccinate synthase ISU63_11570 PF01070 FMN-dependent dehydrogenase ISU63_11575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU63_11575 PF13378 Enolase C-terminal domain-like ISU63_11580 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU63_11590 PF04134 Protein of unknown function, DUF393 ISU63_11595 PF07690 Major Facilitator Superfamily ISU63_11600 PF09134 Invasin, domain 3 ISU63_11600 PF02369 Bacterial Ig-like domain (group 1) ISU63_11600 PF11924 Inverse autotransporter, beta-domain ISU63_11605 PF00872 Transposase, Mutator family ISU63_11610 PF04363 Protein of unknown function (DUF496) ISU63_11620 PF08411 Exonuclease C-terminal ISU63_11620 PF00929 Exonuclease ISU63_11630 PF13520 Amino acid permease ISU63_11635 PF01797 Transposase IS200 like ISU63_11640 PF00465 Iron-containing alcohol dehydrogenase ISU63_11645 PF00005 ABC transporter ISU63_11650 PF00005 ABC transporter ISU63_11655 PF02653 Branched-chain amino acid transport system / permease component ISU63_11670 PF01370 NAD dependent epimerase/dehydratase family ISU63_11680 PF08029 HisG, C-terminal domain ISU63_11680 PF01634 ATP phosphoribosyltransferase ISU63_11685 PF00815 Histidinol dehydrogenase ISU63_11690 PF00155 Aminotransferase class I and II ISU63_11695 PF00475 Imidazoleglycerol-phosphate dehydratase ISU63_11700 PF00117 Glutamine amidotransferase class-I ISU63_11705 PF00977 Histidine biosynthesis protein ISU63_11710 PF00977 Histidine biosynthesis protein ISU63_11715 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU63_11715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU63_11720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU63_11720 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU63_11725 PF00483 Nucleotidyl transferase ISU63_11730 PF00483 Nucleotidyl transferase ISU63_11735 PF04183 IucA / IucC family ISU63_11735 PF06276 Ferric iron reductase FhuF-like transporter ISU63_11740 PF00593 TonB dependent receptor ISU63_11740 PF07660 Secretin and TonB N terminus short domain ISU63_11740 PF07715 TonB-dependent Receptor Plug Domain ISU63_11745 PF01497 Periplasmic binding protein ISU63_11750 PF01032 FecCD transport family ISU63_11755 PF01032 FecCD transport family ISU63_11760 PF00005 ABC transporter ISU63_11765 PF06276 Ferric iron reductase FhuF-like transporter ISU63_11765 PF04183 IucA / IucC family ISU63_11775 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU63_11780 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU63_11785 PF11575 FhuF 2Fe-2S C-terminal domain ISU63_11785 PF06276 Ferric iron reductase FhuF-like transporter ISU63_11790 PF03741 Integral membrane protein TerC family ISU63_11790 PF03471 Transporter associated domain ISU63_11790 PF00571 CBS domain ISU63_11795 PF05170 AsmA family ISU63_11800 PF00692 dUTPase ISU63_11805 PF00485 Phosphoribulokinase / Uridine kinase family ISU63_11810 PF10609 NUBPL iron-transfer P-loop NTPase ISU63_11815 PF01588 Putative tRNA binding domain ISU63_11815 PF09334 tRNA synthetases class I (M) ISU63_11820 PF01797 Transposase IS200 like ISU63_11840 PF07690 Major Facilitator Superfamily ISU63_11845 PF03788 LrgA family ISU63_11850 PF04172 LrgB-like family ISU63_11855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU63_11855 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU63_11860 PF03949 Malic enzyme, NAD binding domain ISU63_11860 PF00390 Malic enzyme, N-terminal domain ISU63_11865 PF02698 DUF218 domain ISU63_11870 PF02653 Branched-chain amino acid transport system / permease component ISU63_11875 PF00005 ABC transporter ISU63_11880 PF13407 Periplasmic binding protein domain ISU63_11885 PF04235 Protein of unknown function (DUF418) ISU63_11890 PF01227 GTP cyclohydrolase I ISU63_11895 PF06779 Uncharacterised MFS-type transporter YbfB ISU63_11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_11900 PF03466 LysR substrate binding domain ISU63_11905 PF08240 Alcohol dehydrogenase GroES-like domain ISU63_11905 PF00107 Zinc-binding dehydrogenase ISU63_11910 PF00756 Putative esterase ISU63_11925 PF13533 Biotin-lipoyl like ISU63_11930 PF00005 ABC transporter ISU63_11940 PF00994 Probable molybdopterin binding domain ISU63_11940 PF03453 MoeA N-terminal region (domain I and II) ISU63_11940 PF03454 MoeA C-terminal region (domain IV) ISU63_11945 PF00899 ThiF family ISU63_11950 PF00872 Transposase, Mutator family ISU63_11960 PF12848 ABC transporter ISU63_11960 PF00005 ABC transporter ISU63_12050 PF04717 Type VI secretion system, phage-baseplate injector ISU63_12050 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU63_12050 PF13296 Putative type VI secretion system Rhs element Vgr ISU63_12055 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_12055 PF07724 AAA domain (Cdc48 subfamily) ISU63_12055 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_12055 PF17871 AAA lid domain ISU63_12065 PF05736 OprF membrane domain ISU63_12065 PF00691 OmpA family ISU63_12080 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU63_12090 PF00698 Acyl transferase domain ISU63_12095 PF00550 Phosphopantetheine attachment site ISU63_12110 PF00378 Enoyl-CoA hydratase/isomerase ISU63_12120 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU63_12120 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU63_12130 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU63_12130 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU63_12135 PF07977 FabA-like domain ISU63_12150 PF08031 Berberine and berberine like ISU63_12150 PF01565 FAD binding domain ISU63_12170 PF04358 DsrC like protein ISU63_12175 PF00708 Acylphosphatase ISU63_12180 PF17785 PUA-like domain ISU63_12180 PF10672 S-adenosylmethionine-dependent methyltransferase ISU63_12185 PF08755 Hemimethylated DNA-binding protein YccV like ISU63_12190 PF13380 CoA binding domain ISU63_12195 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU63_12200 PF02142 MGS-like domain ISU63_12205 PF13361 UvrD-like helicase C-terminal domain ISU63_12205 PF00580 UvrD/REP helicase N-terminal domain ISU63_12205 PF12462 DNA helicase IV / RNA helicase N terminal ISU63_12210 PF03733 Inner membrane component domain ISU63_12215 PF12805 FUSC-like inner membrane protein yccS ISU63_12220 PF04994 TfoX C-terminal domain ISU63_12220 PF04993 TfoX N-terminal domain ISU63_12225 PF03846 Cell division inhibitor SulA ISU63_12230 PF00691 OmpA family ISU63_12230 PF01389 OmpA-like transmembrane domain ISU63_12235 PF01797 Transposase IS200 like ISU63_12240 PF17414 MatP C-terminal ribbon-helix-helix domain ISU63_12240 PF06303 MatP N-terminal domain ISU63_12245 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU63_12245 PF13654 AAA domain ISU63_12250 PF07977 FabA-like domain ISU63_12265 PF02796 Helix-turn-helix domain of resolvase ISU63_12265 PF00665 Integrase core domain ISU63_12270 PF01695 IstB-like ATP binding protein ISU63_12280 PF04957 Ribosome modulation factor ISU63_12285 PF03886 ABC-type transport auxiliary lipoprotein component ISU63_12290 PF02470 MlaD protein ISU63_12295 PF04403 Paraquat-inducible protein A ISU63_12300 PF12848 ABC transporter ISU63_12300 PF16326 ABC transporter C-terminal domain ISU63_12300 PF00005 ABC transporter ISU63_12305 PF02926 THUMP domain ISU63_12305 PF10672 S-adenosylmethionine-dependent methyltransferase ISU63_12305 PF01170 Putative RNA methylase family UPF0020 ISU63_12310 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU63_12310 PF03473 MOSC domain ISU63_12310 PF03476 MOSC N-terminal beta barrel domain ISU63_12315 PF07126 Cell-division protein ZapC ISU63_12320 PF01180 Dihydroorotate dehydrogenase ISU63_12325 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU63_12325 PF01433 Peptidase family M1 domain ISU63_12325 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU63_12330 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU63_12330 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU63_12335 PF00152 tRNA synthetases class II (D, K and N) ISU63_12335 PF01336 OB-fold nucleic acid binding domain ISU63_12340 PF00267 Gram-negative porin ISU63_12345 PF00155 Aminotransferase class I and II ISU63_12355 PF00753 Metallo-beta-lactamase superfamily ISU63_12360 PF05951 Bacterial protein of unknown function (DUF882) ISU63_12365 PF03734 L,D-transpeptidase catalytic domain ISU63_12365 PF01471 Putative peptidoglycan binding domain ISU63_12375 PF16330 MukB hinge domain ISU63_12375 PF04310 MukB N-terminal ISU63_12380 PF04288 MukE-like family ISU63_12385 PF17192 MukF middle domain ISU63_12385 PF03882 MukF winged-helix domain ISU63_12385 PF17193 MukF C-terminal domain ISU63_12390 PF13847 Methyltransferase domain ISU63_12395 PF01636 Phosphotransferase enzyme family ISU63_12400 PF02348 Cytidylyltransferase ISU63_12405 PF03966 Trm112p-like protein ISU63_12410 PF00313 'Cold-shock' DNA-binding domain ISU63_12415 PF07063 Domain of unknown function (DUF1338) ISU63_12420 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU63_12425 PF00005 ABC transporter ISU63_12425 PF00664 ABC transporter transmembrane region ISU63_12430 PF03772 Competence protein ISU63_12430 PF00753 Metallo-beta-lactamase superfamily ISU63_12435 PF00216 Bacterial DNA-binding protein ISU63_12440 PF00575 S1 RNA binding domain ISU63_12445 PF02224 Cytidylate kinase ISU63_12450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU63_12455 PF00266 Aminotransferase class-V ISU63_12465 PF05658 Head domain of trimeric autotransporter adhesin ISU63_12465 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU63_12465 PF05658 Head domain of trimeric autotransporter adhesin ISU63_12465 PF13018 Extended Signal Peptide of Type V secretion system ISU63_12465 PF03895 YadA-like membrane anchor domain ISU63_12465 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU63_12465 PF13018 Extended Signal Peptide of Type V secretion system ISU63_12465 PF03895 YadA-like membrane anchor domain ISU63_12470 PF00710 Asparaginase, N-terminal ISU63_12470 PF17763 Glutaminase/Asparaginase C-terminal domain ISU63_12475 PF18381 YcaO cyclodehydratase C-terminal domain ISU63_12475 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU63_12480 PF01226 Formate/nitrite transporter ISU63_12485 PF01228 Glycine radical ISU63_12485 PF02901 Pyruvate formate lyase-like ISU63_12495 PF04055 Radical SAM superfamily ISU63_12505 PF02796 Helix-turn-helix domain of resolvase ISU63_12505 PF00665 Integrase core domain ISU63_12510 PF01695 IstB-like ATP binding protein ISU63_12520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU63_12520 PF02403 Seryl-tRNA synthetase N-terminal domain ISU63_12525 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_12525 PF12002 MgsA AAA+ ATPase C terminal ISU63_12525 PF16193 AAA C-terminal domain ISU63_12530 PF03548 Outer membrane lipoprotein carrier protein LolA ISU63_12535 PF09397 Ftsk gamma domain ISU63_12535 PF17854 FtsK alpha domain ISU63_12535 PF01580 FtsK/SpoIIIE family ISU63_12535 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU63_12540 PF01037 Lrp/AsnC ligand binding domain ISU63_12545 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_12550 PF00005 ABC transporter ISU63_12550 PF00664 ABC transporter transmembrane region ISU63_12555 PF00664 ABC transporter transmembrane region ISU63_12555 PF00005 ABC transporter ISU63_12560 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU63_12565 PF01176 Translation initiation factor 1A / IF-1 ISU63_12580 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU63_12585 PF00313 'Cold-shock' DNA-binding domain ISU63_12590 PF02687 FtsX-like permease family ISU63_12590 PF00005 ABC transporter ISU63_12590 PF12704 MacB-like periplasmic core domain ISU63_12595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_12600 PF04393 Protein of unknown function (DUF535) ISU63_12605 PF11398 Protein of unknown function (DUF2813) ISU63_12610 PF03956 Lysine exporter LysO ISU63_12615 PF03063 Prismane/CO dehydrogenase family ISU63_12620 PF00175 Oxidoreductase NAD-binding domain ISU63_12620 PF00970 Oxidoreductase FAD-binding domain ISU63_12620 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU63_12625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU63_12625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU63_12625 PF00205 Thiamine pyrophosphate enzyme, central domain ISU63_12635 PF01212 Beta-eliminating lyase ISU63_12640 PF11066 Protein of unknown function (DUF2867) ISU63_12640 PF13460 NAD(P)H-binding ISU63_12645 PF01370 NAD dependent epimerase/dehydratase family ISU63_12650 PF12883 Protein of unknown function (DUF3828) ISU63_12655 PF01817 Chorismate mutase type II ISU63_12660 PF00005 ABC transporter ISU63_12665 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_12670 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_12675 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_12685 PF00892 EamA-like transporter family ISU63_12690 PF10100 Staphylopine dehydrogenase ISU63_12695 PF03059 Nicotianamine synthase protein ISU63_12700 PF00005 ABC transporter ISU63_12705 PF01032 FecCD transport family ISU63_12710 PF01032 FecCD transport family ISU63_12735 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_12740 PF05958 tRNA (Uracil-5-)-methyltransferase ISU63_12745 PF10767 Protein of unknown function (DUF2593) ISU63_12750 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_12755 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_12760 PF00005 ABC transporter ISU63_12760 PF08402 TOBE domain ISU63_12765 PF13416 Bacterial extracellular solute-binding protein ISU63_12770 PF10722 Putative bacterial sensory transduction regulator ISU63_12775 PF07214 Protein of unknown function (DUF1418) ISU63_12780 PF00462 Glutaredoxin ISU63_12785 PF06826 Predicted Permease Membrane Region ISU63_12785 PF02080 TrkA-C domain ISU63_12795 PF01569 PAP2 superfamily ISU63_12800 PF01791 DeoC/LacD family aldolase ISU63_12805 PF08220 DeoR-like helix-turn-helix domain ISU63_12805 PF00455 DeoR C terminal sensor domain ISU63_12815 PF07943 Penicillin-binding protein 5, C-terminal domain ISU63_12815 PF00768 D-alanyl-D-alanine carboxypeptidase ISU63_12820 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_12825 PF09383 NIL domain ISU63_12825 PF00005 ABC transporter ISU63_12830 PF03180 NLPA lipoprotein ISU63_12845 PF13417 Glutathione S-transferase, N-terminal domain ISU63_12845 PF00043 Glutathione S-transferase, C-terminal domain ISU63_12850 PF07715 TonB-dependent Receptor Plug Domain ISU63_12850 PF00593 TonB dependent receptor ISU63_12855 PF00005 ABC transporter ISU63_12860 PF01032 FecCD transport family ISU63_12870 PF00324 Amino acid permease ISU63_12875 PF03466 LysR substrate binding domain ISU63_12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_12880 PF03601 Conserved hypothetical protein 698 ISU63_12885 PF01261 Xylose isomerase-like TIM barrel ISU63_12890 PF13953 PapC C-terminal domain ISU63_12890 PF00577 Outer membrane usher protein ISU63_12890 PF13954 PapC N-terminal domain ISU63_12895 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_12895 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_12905 PF17550 Family of unknown function ISU63_12910 PF00486 Transcriptional regulatory protein, C terminal ISU63_12915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU63_12915 PF02378 Phosphotransferase system, EIIC ISU63_12920 PF00294 pfkB family carbohydrate kinase ISU63_12925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU63_12925 PF00381 PTS HPr component phosphorylation site ISU63_12930 PF00293 NUDIX domain ISU63_12935 PF02653 Branched-chain amino acid transport system / permease component ISU63_12940 PF00005 ABC transporter ISU63_12950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU63_12955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_12955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_12960 PF00171 Aldehyde dehydrogenase family ISU63_12970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU63_12970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU63_12970 PF01842 ACT domain ISU63_12980 PF03692 Putative zinc- or iron-chelating domain ISU63_12985 PF03222 Tryptophan/tyrosine permease family ISU63_12990 PF09285 Elongation factor P, C-terminal ISU63_12990 PF08207 Elongation factor P (EF-P) KOW-like domain ISU63_12990 PF01132 Elongation factor P (EF-P) OB domain ISU63_12995 PF03786 D-mannonate dehydratase (UxuA) ISU63_13000 PF01232 Mannitol dehydrogenase Rossmann domain ISU63_13000 PF08125 Mannitol dehydrogenase C-terminal domain ISU63_13005 PF07729 FCD domain ISU63_13005 PF00392 Bacterial regulatory proteins, gntR family ISU63_13010 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU63_13010 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU63_13015 PF01569 PAP2 superfamily ISU63_13020 PF00877 NlpC/P60 family ISU63_13025 PF12792 CSS motif domain associated with EAL ISU63_13025 PF00563 EAL domain ISU63_13030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_13035 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_13040 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU63_13040 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_13045 PF00005 ABC transporter ISU63_13045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_13050 PF13989 YejG-like protein ISU63_13055 PF07690 Major Facilitator Superfamily ISU63_13060 PF01479 S4 domain ISU63_13060 PF00849 RNA pseudouridylate synthase ISU63_13065 PF04851 Type III restriction enzyme, res subunit ISU63_13065 PF00271 Helicase conserved C-terminal domain ISU63_13070 PF01386 Ribosomal L25p family ISU63_13075 PF01797 Transposase IS200 like ISU63_13080 PF04245 37-kD nucleoid-associated bacterial protein ISU63_13085 PF07208 Protein of unknown function (DUF1414) ISU63_13090 PF11893 Domain of unknown function (DUF3413) ISU63_13090 PF00884 Sulfatase ISU63_13105 PF05638 Type VI secretion system effector, Hcp ISU63_13125 PF00232 Glycosyl hydrolase family 1 ISU63_13130 PF01380 SIS domain ISU63_13130 PF01418 Helix-turn-helix domain, rpiR family ISU63_13135 PF07484 Phage Tail Collar Domain ISU63_13150 PF04865 Baseplate J-like protein ISU63_13190 PF17482 Phage tail sheath C-terminal domain ISU63_13190 PF04984 Phage tail sheath protein subtilisin-like domain ISU63_13210 PF01261 Xylose isomerase-like TIM barrel ISU63_13215 PF08220 DeoR-like helix-turn-helix domain ISU63_13215 PF00455 DeoR C terminal sensor domain ISU63_13225 PF17042 Nucleotide-binding C-terminal domain ISU63_13225 PF07005 Sugar-binding N-terminal domain ISU63_13230 PF06530 Phage antitermination protein Q ISU63_13235 PF01381 Helix-turn-helix ISU63_13235 PF00717 Peptidase S24-like ISU63_13240 PF06183 DinI-like family ISU63_13245 PF01278 Omptin family ISU63_13250 PF00672 HAMP domain ISU63_13250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU63_13250 PF02743 Cache domain ISU63_13255 PF12706 Beta-lactamase superfamily domain ISU63_13265 PF00144 Beta-lactamase ISU63_13285 PF00267 Gram-negative porin ISU63_13290 PF07690 Major Facilitator Superfamily ISU63_13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_13295 PF16359 RcsD-ABL domain ISU63_13295 PF01627 Hpt domain ISU63_13300 PF16359 RcsD-ABL domain ISU63_13300 PF01627 Hpt domain ISU63_13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_13305 PF00196 Bacterial regulatory proteins, luxR family ISU63_13305 PF00072 Response regulator receiver domain ISU63_13310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_13310 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU63_13310 PF00512 His Kinase A (phospho-acceptor) domain ISU63_13310 PF00072 Response regulator receiver domain ISU63_13315 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU63_13315 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU63_13325 PF03477 ATP cone domain ISU63_13325 PF02867 Ribonucleotide reductase, barrel domain ISU63_13325 PF00317 Ribonucleotide reductase, all-alpha domain ISU63_13330 PF00268 Ribonucleotide reductase, small chain ISU63_13335 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU63_13340 PF03974 Ecotin ISU63_13345 PF00994 Probable molybdopterin binding domain ISU63_13350 PF03222 Tryptophan/tyrosine permease family ISU63_13355 PF07437 YfaZ precursor ISU63_13360 PF06628 Catalase-related immune-responsive ISU63_13360 PF00199 Catalase ISU63_13365 PF13307 Helicase C-terminal domain ISU63_13365 PF06733 DEAD_2 ISU63_13370 PF00267 Gram-negative porin ISU63_13375 PF00892 EamA-like transporter family ISU63_13385 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU63_13385 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU63_13385 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU63_13390 PF13520 Amino acid permease ISU63_13395 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_13400 PF00005 ABC transporter ISU63_13405 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_13415 PF00581 Rhodanese-like domain ISU63_13430 PF00005 ABC transporter ISU63_13435 PF00005 ABC transporter ISU63_13440 PF02653 Branched-chain amino acid transport system / permease component ISU63_13445 PF02653 Branched-chain amino acid transport system / permease component ISU63_13450 PF13188 PAS domain ISU63_13450 PF02954 Bacterial regulatory protein, Fis family ISU63_13450 PF00158 Sigma-54 interaction domain ISU63_13455 PF07308 Protein of unknown function (DUF1456) ISU63_13460 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_13465 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_13475 PF00005 ABC transporter ISU63_13480 PF04226 Transglycosylase associated protein ISU63_13490 PF01844 HNH endonuclease ISU63_13495 PF01928 CYTH domain ISU63_13500 PF01565 FAD binding domain ISU63_13500 PF09330 D-lactate dehydrogenase, membrane binding ISU63_13505 PF00768 D-alanyl-D-alanine carboxypeptidase ISU63_13515 PF01207 Dihydrouridine synthase (Dus) ISU63_13540 PF00872 Transposase, Mutator family ISU63_13570 PF05638 Type VI secretion system effector, Hcp ISU63_13575 PF01797 Transposase IS200 like ISU63_13580 PF00117 Glutamine amidotransferase class-I ISU63_13580 PF00958 GMP synthase C terminal domain ISU63_13580 PF02540 NAD synthase ISU63_13585 PF00571 CBS domain ISU63_13585 PF00478 IMP dehydrogenase / GMP reductase domain ISU63_13590 PF13742 OB-fold nucleic acid binding domain ISU63_13590 PF02601 Exonuclease VII, large subunit ISU63_13595 PF07191 zinc-ribbons ISU63_13605 PF01926 50S ribosome-binding GTPase ISU63_13605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU63_13610 PF13360 PQQ-like domain ISU63_13615 PF09976 Tetratricopeptide repeat-like domain ISU63_13620 PF03129 Anticodon binding domain ISU63_13620 PF13393 Histidyl-tRNA synthetase ISU63_13625 PF04551 GcpE protein ISU63_13630 PF13464 Domain of unknown function (DUF4115) ISU63_13640 PF04055 Radical SAM superfamily ISU63_13645 PF00334 Nucleoside diphosphate kinase ISU63_13655 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU63_13655 PF03212 Pertactin ISU63_13655 PF03797 Autotransporter beta-domain ISU63_13660 PF03212 Pertactin ISU63_13660 PF03797 Autotransporter beta-domain ISU63_13660 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU63_13675 PF14581 SseB protein C-terminal domain ISU63_13675 PF07179 SseB protein N-terminal domain ISU63_13680 PF12404 Peptidase ISU63_13680 PF00883 Cytosol aminopeptidase family, catalytic domain ISU63_13685 PF04384 Iron-sulphur cluster assembly ISU63_13690 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU63_13695 PF00012 Hsp70 protein ISU63_13700 PF00226 DnaJ domain ISU63_13700 PF07743 HSCB C-terminal oligomerisation domain ISU63_13705 PF01521 Iron-sulphur cluster biosynthesis ISU63_13710 PF01592 NifU-like N terminal domain ISU63_13715 PF00266 Aminotransferase class-V ISU63_13720 PF02082 Transcriptional regulator ISU63_13725 PF00588 SpoU rRNA Methylase family ISU63_13730 PF00459 Inositol monophosphatase family ISU63_13735 PF01797 Transposase IS200 like ISU63_13740 PF03824 High-affinity nickel-transport protein ISU63_13745 PF06226 Protein of unknown function (DUF1007) ISU63_13750 PF00874 PRD domain ISU63_13755 PF12832 MFS_1 like family ISU63_13760 PF13505 Outer membrane protein beta-barrel domain ISU63_13770 PF00464 Serine hydroxymethyltransferase ISU63_13775 PF00970 Oxidoreductase FAD-binding domain ISU63_13775 PF00042 Globin ISU63_13775 PF00175 Oxidoreductase NAD-binding domain ISU63_13785 PF00543 Nitrogen regulatory protein P-II ISU63_13790 PF02540 NAD synthase ISU63_13790 PF00795 Carbon-nitrogen hydrolase ISU63_13795 PF00158 Sigma-54 interaction domain ISU63_13795 PF00072 Response regulator receiver domain ISU63_13800 PF13942 YfhG lipoprotein ISU63_13805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_13805 PF00512 His Kinase A (phospho-acceptor) domain ISU63_13835 PF02769 AIR synthase related protein, C-terminal domain ISU63_13835 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU63_13835 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU63_13840 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_13840 PF01464 Transglycosylase SLT domain ISU63_13845 PF14437 MafB19-like deaminase ISU63_13855 PF01380 SIS domain ISU63_13860 PF01418 Helix-turn-helix domain, rpiR family ISU63_13860 PF01380 SIS domain ISU63_13865 PF12838 4Fe-4S dicluster domain ISU63_13870 PF01797 Transposase IS200 like ISU63_13875 PF01648 4'-phosphopantetheinyl transferase superfamily ISU63_13880 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU63_13885 PF11967 Recombination protein O N terminal ISU63_13885 PF02565 Recombination protein O C terminal ISU63_13890 PF07650 KH domain ISU63_13890 PF01926 50S ribosome-binding GTPase ISU63_13895 PF14622 Ribonuclease-III-like ISU63_13895 PF00035 Double-stranded RNA binding motif ISU63_13900 PF10502 Signal peptidase, peptidase S26 ISU63_13905 PF00009 Elongation factor Tu GTP binding domain ISU63_13905 PF06421 GTP-binding protein LepA C-terminus ISU63_13905 PF03144 Elongation factor Tu domain 2 ISU63_13905 PF00679 Elongation factor G C-terminus ISU63_13920 PF17188 MucB/RseB C-terminal domain ISU63_13920 PF03888 MucB/RseB N-terminal domain ISU63_13925 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU63_13925 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU63_13930 PF08281 Sigma-70, region 4 ISU63_13930 PF04542 Sigma-70 region 2 ISU63_13935 PF02910 Fumarate reductase flavoprotein C-term ISU63_13935 PF00890 FAD binding domain ISU63_13940 PF05175 Methyltransferase small domain ISU63_13945 PF00270 DEAD/DEAH box helicase ISU63_13945 PF00271 Helicase conserved C-terminal domain ISU63_13950 PF12796 Ankyrin repeats (3 copies) ISU63_13960 PF01228 Glycine radical ISU63_13965 PF03167 Uracil DNA glycosylase superfamily ISU63_13970 PF01470 Pyroglutamyl peptidase ISU63_13985 PF03746 LamB/YcsF family ISU63_13990 PF02626 Carboxyltransferase domain, subdomain A and B ISU63_14005 PF01784 NIF3 (NGG1p interacting factor 3) ISU63_14010 PF02112 cAMP phosphodiesterases class-II ISU63_14015 PF03441 FAD binding domain of DNA photolyase ISU63_14015 PF00875 DNA photolyase ISU63_14020 PF08349 Protein of unknown function (DUF1722) ISU63_14025 PF10725 Protein of unknown function (DUF2517) ISU63_14040 PF03814 Potassium-transporting ATPase A subunit ISU63_14050 PF02669 K+-transporting ATPase, c chain ISU63_14055 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU63_14055 PF00512 His Kinase A (phospho-acceptor) domain ISU63_14055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_14055 PF13493 Domain of unknown function (DUF4118) ISU63_14055 PF13492 GAF domain ISU63_14060 PF00486 Transcriptional regulatory protein, C terminal ISU63_14060 PF00072 Response regulator receiver domain ISU63_14075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU63_14075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU63_14075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU63_14075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU63_14080 PF03925 SeqA protein C-terminal domain ISU63_14080 PF17206 SeqA protein N-terminal domain ISU63_14090 PF04794 YdjC-like protein ISU63_14095 PF12833 Helix-turn-helix domain ISU63_14095 PF07883 Cupin domain ISU63_14100 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU63_14105 PF02378 Phosphotransferase system, EIIC ISU63_14110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU63_14120 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU63_14125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU63_14130 PF02254 TrkA-N domain ISU63_14130 PF07885 Ion channel ISU63_14135 PF06411 HdeA/HdeB family ISU63_14140 PF03824 High-affinity nickel-transport protein ISU63_14145 PF03253 Urea transporter ISU63_14155 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU63_14160 PF01730 UreF ISU63_14165 PF05194 UreE urease accessory protein, C-terminal domain ISU63_14165 PF02814 UreE urease accessory protein, N-terminal domain ISU63_14170 PF01979 Amidohydrolase family ISU63_14170 PF00449 Urease alpha-subunit, N-terminal domain ISU63_14175 PF00699 Urease beta subunit ISU63_14180 PF00547 Urease, gamma subunit ISU63_14185 PF00005 ABC transporter ISU63_14190 PF00005 ABC transporter ISU63_14195 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_14195 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU63_14200 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_14205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_14210 PF00313 'Cold-shock' DNA-binding domain ISU63_14220 PF06711 Protein of unknown function (DUF1198) ISU63_14225 PF09400 Protein of unknown function (DUF2002) ISU63_14230 PF06392 Acid shock protein repeat ISU63_14245 PF08343 Ribonucleotide reductase N-terminal ISU63_14245 PF00317 Ribonucleotide reductase, all-alpha domain ISU63_14245 PF02867 Ribonucleotide reductase, barrel domain ISU63_14250 PF00268 Ribonucleotide reductase, small chain ISU63_14255 PF00571 CBS domain ISU63_14255 PF00005 ABC transporter ISU63_14260 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_14265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU63_14280 PF00665 Integrase core domain ISU63_14280 PF02796 Helix-turn-helix domain of resolvase ISU63_14285 PF01695 IstB-like ATP binding protein ISU63_14300 PF13356 Arm DNA-binding domain ISU63_14300 PF00589 Phage integrase family ISU63_14310 PF12697 Alpha/beta hydrolase family ISU63_14315 PF01402 Ribbon-helix-helix protein, copG family ISU63_14320 PF00258 Flavodoxin ISU63_14325 PF01475 Ferric uptake regulator family ISU63_14335 PF03573 outer membrane porin, OprD family ISU63_14340 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU63_14340 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU63_14345 PF01797 Transposase IS200 like ISU63_14350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU63_14350 PF02378 Phosphotransferase system, EIIC ISU63_14350 PF00367 phosphotransferase system, EIIB ISU63_14355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU63_14360 PF01979 Amidohydrolase family ISU63_14365 PF00480 ROK family ISU63_14365 PF01047 MarR family ISU63_14370 PF13344 Haloacid dehalogenase-like hydrolase ISU63_14375 PF00733 Asparagine synthase ISU63_14375 PF13537 Glutamine amidotransferase domain ISU63_14410 PF01494 FAD binding domain ISU63_14415 PF00919 Uncharacterized protein family UPF0004 ISU63_14415 PF04055 Radical SAM superfamily ISU63_14415 PF01938 TRAM domain ISU63_14420 PF02562 PhoH-like protein ISU63_14425 PF02130 Uncharacterized protein family UPF0054 ISU63_14430 PF00571 CBS domain ISU63_14430 PF03471 Transporter associated domain ISU63_14435 PF00795 Carbon-nitrogen hydrolase ISU63_14440 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_14445 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_14450 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_14455 PF00005 ABC transporter ISU63_14460 PF07295 Zinc-ribbon containing domain ISU63_14465 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU63_14465 PF08264 Anticodon-binding domain of tRNA ISU63_14465 PF00133 tRNA synthetases class I (I, L, M and V) ISU63_14470 PF04390 Lipopolysaccharide-assembly ISU63_14475 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU63_14475 PF06144 DNA polymerase III, delta subunit ISU63_14480 PF01467 Cytidylyltransferase-like ISU63_14490 PF02590 Predicted SPOUT methyltransferase ISU63_14495 PF00905 Penicillin binding protein transpeptidase domain ISU63_14495 PF03717 Penicillin-binding Protein dimerisation domain ISU63_14500 PF01098 Cell cycle protein ISU63_14505 PF03330 Lytic transglycolase ISU63_14505 PF05036 Sporulation related domain ISU63_14510 PF00768 D-alanyl-D-alanine carboxypeptidase ISU63_14510 PF07943 Penicillin-binding protein 5, C-terminal domain ISU63_14515 PF04359 Protein of unknown function (DUF493) ISU63_14520 PF03099 Biotin/lipoate A/B protein ligase family ISU63_14525 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU63_14525 PF04055 Radical SAM superfamily ISU63_14530 PF02416 mttA/Hcf106 family ISU63_14535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU63_14540 PF00313 'Cold-shock' DNA-binding domain ISU63_14545 PF00313 'Cold-shock' DNA-binding domain ISU63_14550 PF00196 Bacterial regulatory proteins, luxR family ISU63_14575 PF00664 ABC transporter transmembrane region ISU63_14575 PF00005 ABC transporter ISU63_14585 PF04962 KduI/IolB family ISU63_14590 PF01261 Xylose isomerase-like TIM barrel ISU63_14595 PF00294 pfkB family carbohydrate kinase ISU63_14600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU63_14600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU63_14605 PF02653 Branched-chain amino acid transport system / permease component ISU63_14610 PF00005 ABC transporter ISU63_14615 PF13407 Periplasmic binding protein domain ISU63_14625 PF00205 Thiamine pyrophosphate enzyme, central domain ISU63_14625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU63_14625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU63_14630 PF00171 Aldehyde dehydrogenase family ISU63_14645 PF01835 MG2 domain ISU63_14645 PF17962 Bacterial macroglobulin domain 6 ISU63_14645 PF07703 Alpha-2-macroglobulin bait region domain ISU63_14645 PF00207 Alpha-2-macroglobulin family ISU63_14645 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU63_14645 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU63_14645 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU63_14650 PF01797 Transposase IS200 like ISU63_14655 PF00905 Penicillin binding protein transpeptidase domain ISU63_14655 PF00912 Transglycosylase ISU63_14655 PF06832 Penicillin-Binding Protein C-terminus Family ISU63_14660 PF13693 Winged helix-turn-helix DNA-binding ISU63_14680 PF05638 Type VI secretion system effector, Hcp ISU63_14695 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU63_14695 PF03797 Autotransporter beta-domain ISU63_14695 PF13018 Extended Signal Peptide of Type V secretion system ISU63_14695 PF03212 Pertactin ISU63_14715 PF00872 Transposase, Mutator family ISU63_14730 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU63_14730 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU63_14730 PF14310 Fibronectin type III-like domain ISU63_14740 PF00248 Aldo/keto reductase family ISU63_14745 PF00248 Aldo/keto reductase family ISU63_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_14750 PF03466 LysR substrate binding domain ISU63_14755 PF02796 Helix-turn-helix domain of resolvase ISU63_14755 PF00665 Integrase core domain ISU63_14760 PF01695 IstB-like ATP binding protein ISU63_14775 PF00782 Dual specificity phosphatase, catalytic domain ISU63_14780 PF12147 Putative methyltransferase ISU63_14780 PF12146 Serine aminopeptidase, S33 ISU63_14785 PF01553 Acyltransferase ISU63_14795 PF01066 CDP-alcohol phosphatidyltransferase ISU63_14805 PF00589 Phage integrase family ISU63_14835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU63_14835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU63_14845 PF01797 Transposase IS200 like ISU63_14850 PF01406 tRNA synthetases class I (C) catalytic domain ISU63_14850 PF09190 DALR domain ISU63_14855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU63_14860 PF00149 Calcineurin-like phosphoesterase ISU63_14865 PF00731 AIR carboxylase ISU63_14870 PF02222 ATP-grasp domain ISU63_14870 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU63_14880 PF00005 ABC transporter ISU63_14885 PF13472 GDSL-like Lipase/Acylhydrolase family ISU63_14890 PF00106 short chain dehydrogenase ISU63_14895 PF00085 Thioredoxin ISU63_14900 PF16200 C-terminal region of band_7 ISU63_14900 PF01145 SPFH domain / Band 7 family ISU63_14905 PF01957 NfeD-like C-terminal, partner-binding ISU63_14910 PF13411 MerR HTH family regulatory protein ISU63_14915 PF00403 Heavy-metal-associated domain ISU63_14920 PF01963 TraB family ISU63_14925 PF04073 Aminoacyl-tRNA editing domain ISU63_14940 PF07690 Major Facilitator Superfamily ISU63_14945 PF02254 TrkA-N domain ISU63_14945 PF00999 Sodium/hydrogen exchanger family ISU63_14950 PF00294 pfkB family carbohydrate kinase ISU63_14955 PF02706 Chain length determinant protein ISU63_14960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU63_14960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU63_14960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU63_14960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU63_14965 PF00535 Glycosyl transferase family 2 ISU63_14970 PF01050 Mannose-6-phosphate isomerase ISU63_14970 PF00483 Nucleotidyl transferase ISU63_14975 PF01370 NAD dependent epimerase/dehydratase family ISU63_14985 PF00534 Glycosyl transferases group 1 ISU63_14985 PF13439 Glycosyltransferase Family 4 ISU63_15015 PF01370 NAD dependent epimerase/dehydratase family ISU63_15020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU63_15030 PF00483 Nucleotidyl transferase ISU63_15035 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU63_15035 PF00970 Oxidoreductase FAD-binding domain ISU63_15035 PF00175 Oxidoreductase NAD-binding domain ISU63_15040 PF00762 Ferrochelatase ISU63_15045 PF05191 Adenylate kinase, active site lid ISU63_15050 PF00183 Hsp90 protein ISU63_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_15055 PF02132 RecR protein ISU63_15055 PF13662 Toprim domain ISU63_15060 PF02575 YbaB/EbfC DNA-binding family ISU63_15065 PF12169 DNA polymerase III subunits gamma and tau domain III ISU63_15065 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU63_15065 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU63_15070 PF00156 Phosphoribosyl transferase domain ISU63_15075 PF04304 Protein of unknown function (DUF454) ISU63_15085 PF10689 Protein of unknown function (DUF2496) ISU63_15090 PF00924 Mechanosensitive ion channel ISU63_15090 PF12795 Mechanosensitive ion channel porin domain ISU63_15090 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU63_15095 PF02635 DsrE/DsrF-like family ISU63_15100 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU63_15100 PF00440 Bacterial regulatory proteins, tetR family ISU63_15105 PF00529 HlyD membrane-fusion protein of T1SS ISU63_15105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_15110 PF00873 AcrB/AcrD/AcrF family ISU63_15115 PF01197 Ribosomal protein L31 ISU63_15120 PF00444 Ribosomal protein L36 ISU63_15130 PF10757 Biofilm formation regulator YbaJ ISU63_15135 PF05321 Haemolysin expression modulating protein ISU63_15145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU63_15150 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU63_15160 PF00909 Ammonium Transporter Family ISU63_15165 PF00543 Nitrogen regulatory protein P-II ISU63_15170 PF00005 ABC transporter ISU63_15170 PF00664 ABC transporter transmembrane region ISU63_15175 PF00005 ABC transporter ISU63_15175 PF00664 ABC transporter transmembrane region ISU63_15180 PF01037 Lrp/AsnC ligand binding domain ISU63_15180 PF13404 AsnC-type helix-turn-helix domain ISU63_15185 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_15195 PF12793 Sugar transport-related sRNA regulator N-term ISU63_15195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_15200 PF06508 Queuosine biosynthesis protein QueC ISU63_15215 PF13145 PPIC-type PPIASE domain ISU63_15220 PF00216 Bacterial DNA-binding protein ISU63_15225 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU63_15225 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU63_15225 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_15230 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_15230 PF06689 ClpX C4-type zinc finger ISU63_15230 PF07724 AAA domain (Cdc48 subfamily) ISU63_15235 PF00574 Clp protease ISU63_15240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU63_15240 PF05697 Bacterial trigger factor protein (TF) ISU63_15240 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU63_15245 PF01722 BolA-like protein ISU63_15250 PF03923 Uncharacterized lipoprotein ISU63_15250 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU63_15255 PF07690 Major Facilitator Superfamily ISU63_15260 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU63_15265 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU63_15265 PF06481 COX Aromatic Rich Motif ISU63_15270 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU63_15275 PF00510 Cytochrome c oxidase subunit III ISU63_15280 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU63_15285 PF01040 UbiA prenyltransferase family ISU63_15290 PF07690 Major Facilitator Superfamily ISU63_15295 PF04461 Protein of unknown function (DUF520) ISU63_15300 PF02558 Ketopantoate reductase PanE/ApbA ISU63_15300 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU63_15305 PF01965 DJ-1/PfpI family ISU63_15310 PF02568 Thiamine biosynthesis protein (ThiI) ISU63_15310 PF02926 THUMP domain ISU63_15315 PF02609 Exonuclease VII small subunit ISU63_15320 PF00348 Polyprenyl synthetase ISU63_15325 PF02780 Transketolase, C-terminal domain ISU63_15325 PF02779 Transketolase, pyrimidine binding domain ISU63_15325 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU63_15335 PF04608 Phosphatidylglycerophosphatase A ISU63_15340 PF02769 AIR synthase related protein, C-terminal domain ISU63_15340 PF00586 AIR synthase related protein, N-terminal domain ISU63_15345 PF01029 NusB family ISU63_15350 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU63_15355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU63_15355 PF01872 RibD C-terminal domain ISU63_15360 PF03477 ATP cone domain ISU63_15380 PF07549 SecD/SecF GG Motif ISU63_15380 PF02355 Protein export membrane protein ISU63_15385 PF13721 SecD export protein N-terminal TM region ISU63_15385 PF07549 SecD/SecF GG Motif ISU63_15385 PF02355 Protein export membrane protein ISU63_15390 PF02699 Preprotein translocase subunit ISU63_15395 PF01702 Queuine tRNA-ribosyltransferase ISU63_15400 PF02547 Queuosine biosynthesis protein ISU63_15405 PF04336 Acyl carrier protein phosphodiesterase ISU63_15410 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU63_15410 PF00578 AhpC/TSA family ISU63_15430 PF00128 Alpha amylase, catalytic domain ISU63_15430 PF02903 Alpha amylase, N-terminal ig-like domain ISU63_15435 PF00324 Amino acid permease ISU63_15440 PF05525 Branched-chain amino acid transport protein ISU63_15445 PF12849 PBP superfamily domain ISU63_15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_15450 PF00512 His Kinase A (phospho-acceptor) domain ISU63_15450 PF00989 PAS fold ISU63_15450 PF11808 Phosphate regulon sensor protein PhoR ISU63_15455 PF00486 Transcriptional regulatory protein, C terminal ISU63_15455 PF00072 Response regulator receiver domain ISU63_15460 PF00149 Calcineurin-like phosphoesterase ISU63_15460 PF12320 Type 5 capsule protein repressor C-terminal domain ISU63_15465 PF13476 AAA domain ISU63_15470 PF00480 ROK family ISU63_15475 PF01695 IstB-like ATP binding protein ISU63_15480 PF02796 Helix-turn-helix domain of resolvase ISU63_15480 PF00665 Integrase core domain ISU63_15485 PF04381 Putative exonuclease, RdgC ISU63_15490 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU63_15495 PF01202 Shikimate kinase ISU63_15505 PF08241 Methyltransferase domain ISU63_15515 PF07317 Flagellar regulator YcgR ISU63_15515 PF07238 PilZ domain ISU63_15520 PF01797 Transposase IS200 like ISU63_15525 PF00171 Aldehyde dehydrogenase family ISU63_15530 PF01472 PUA domain ISU63_15530 PF00696 Amino acid kinase family ISU63_15535 PF07417 Sigma factor-binding transcriptional regulator Crl ISU63_15540 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU63_15545 PF00156 Phosphoribosyl transferase domain ISU63_15560 PF01797 Transposase IS200 like ISU63_15565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_15565 PF03466 LysR substrate binding domain ISU63_15570 PF01546 Peptidase family M20/M25/M40 ISU63_15570 PF07687 Peptidase dimerisation domain ISU63_15575 PF11798 IMS family HHH motif ISU63_15575 PF11799 impB/mucB/samB family C-terminal domain ISU63_15575 PF00817 impB/mucB/samB family ISU63_15580 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU63_15590 PF02424 ApbE family ISU63_15595 PF00970 Oxidoreductase FAD-binding domain ISU63_15595 PF00175 Oxidoreductase NAD-binding domain ISU63_15595 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU63_15600 PF02508 Rnf-Nqr subunit, membrane protein ISU63_15605 PF02508 Rnf-Nqr subunit, membrane protein ISU63_15610 PF04205 FMN-binding domain ISU63_15615 PF03116 NQR2, RnfD, RnfE family ISU63_15620 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU63_15620 PF11973 NQRA C-terminal domain ISU63_15625 PF03734 L,D-transpeptidase catalytic domain ISU63_15630 PF13230 Glutamine amidotransferases class-II ISU63_15635 PF13580 SIS domain ISU63_15640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU63_15640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU63_15640 PF09317 Domain of unknown function (DUF1974) ISU63_15650 PF18254 HMW1 domain 2 ISU63_15650 PF18071 HMW1C N-terminal ISU63_15660 PF08479 POTRA domain, ShlB-type ISU63_15660 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU63_15670 PF01546 Peptidase family M20/M25/M40 ISU63_15670 PF07687 Peptidase dimerisation domain ISU63_15675 PF00266 Aminotransferase class-V ISU63_15680 PF00005 ABC transporter ISU63_15685 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_15690 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_15695 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_15710 PF01425 Amidase ISU63_15720 PF07690 Major Facilitator Superfamily ISU63_15725 PF03591 AzlC protein ISU63_15730 PF05437 Branched-chain amino acid transport protein (AzlD) ISU63_15735 PF01047 MarR family ISU63_15740 PF00529 HlyD membrane-fusion protein of T1SS ISU63_15740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_15745 PF07690 Major Facilitator Superfamily ISU63_15750 PF00588 SpoU rRNA Methylase family ISU63_15750 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU63_15755 PF00085 Thioredoxin ISU63_15760 PF03942 DTW domain ISU63_15765 PF00583 Acetyltransferase (GNAT) family ISU63_15765 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU63_15765 PF13380 CoA binding domain ISU63_15770 PF13091 PLD-like domain ISU63_15775 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU63_15805 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_15805 PF07724 AAA domain (Cdc48 subfamily) ISU63_15805 PF17871 AAA lid domain ISU63_15805 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_15805 PF02861 Clp amino terminal domain, pathogenicity island component ISU63_15810 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU63_15815 PF01479 S4 domain ISU63_15815 PF00849 RNA pseudouridylate synthase ISU63_15820 PF13525 Outer membrane lipoprotein ISU63_15825 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU63_15840 PF02796 Helix-turn-helix domain of resolvase ISU63_15840 PF00665 Integrase core domain ISU63_15845 PF01695 IstB-like ATP binding protein ISU63_15855 PF01817 Chorismate mutase type II ISU63_15855 PF02153 Prephenate dehydrogenase ISU63_15860 PF00793 DAHP synthetase I family ISU63_15865 PF04397 LytTr DNA-binding domain ISU63_15865 PF00072 Response regulator receiver domain ISU63_15875 PF04338 Protein of unknown function, DUF481 ISU63_15880 PF01797 Transposase IS200 like ISU63_15885 PF01245 Ribosomal protein L19 ISU63_15890 PF01746 tRNA (Guanine-1)-methyltransferase ISU63_15895 PF01782 RimM N-terminal domain ISU63_15895 PF05239 PRC-barrel domain ISU63_15900 PF00886 Ribosomal protein S16 ISU63_15905 PF00448 SRP54-type protein, GTPase domain ISU63_15905 PF02881 SRP54-type protein, helical bundle domain ISU63_15905 PF02978 Signal peptide binding domain ISU63_15910 PF01578 Cytochrome C assembly protein ISU63_15915 PF00571 CBS domain ISU63_15915 PF01595 Cyclin M transmembrane N-terminal domain ISU63_15915 PF03471 Transporter associated domain ISU63_15930 PF02664 S-Ribosylhomocysteinase (LuxS) ISU63_15935 PF04262 Glutamate-cysteine ligase ISU63_15940 PF09335 SNARE associated Golgi protein ISU63_15945 PF13419 Haloacid dehalogenase-like hydrolase ISU63_15980 PF02599 Global regulator protein family ISU63_15985 PF02272 DHHA1 domain ISU63_15985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU63_15985 PF01411 tRNA synthetases class II (A) ISU63_15990 PF02631 RecX family ISU63_15995 PF00154 recA bacterial DNA recombination protein ISU63_16000 PF02464 Competence-damaged protein ISU63_16005 PF07690 Major Facilitator Superfamily ISU63_16020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_16020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_16025 PF02780 Transketolase, C-terminal domain ISU63_16025 PF02779 Transketolase, pyrimidine binding domain ISU63_16030 PF00456 Transketolase, thiamine diphosphate binding domain ISU63_16035 PF02653 Branched-chain amino acid transport system / permease component ISU63_16040 PF00005 ABC transporter ISU63_16050 PF13407 Periplasmic binding protein domain ISU63_16055 PF00141 Peroxidase ISU63_16060 PF07361 Cytochrome b562 ISU63_16065 PF01292 Prokaryotic cytochrome b561 ISU63_16070 PF02613 Nitrate reductase delta subunit ISU63_16075 PF04976 DMSO reductase anchor subunit (DmsC) ISU63_16080 PF13247 4Fe-4S dicluster domain ISU63_16080 PF12800 4Fe-4S binding domain ISU63_16085 PF00384 Molybdopterin oxidoreductase ISU63_16085 PF01568 Molydopterin dinucleotide binding domain ISU63_16085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU63_16090 PF00596 Class II Aldolase and Adducin N-terminal domain ISU63_16095 PF00455 DeoR C terminal sensor domain ISU63_16095 PF08220 DeoR-like helix-turn-helix domain ISU63_16105 PF01797 Transposase IS200 like ISU63_16110 PF00005 ABC transporter ISU63_16115 PF02653 Branched-chain amino acid transport system / permease component ISU63_16120 PF02653 Branched-chain amino acid transport system / permease component ISU63_16125 PF01261 Xylose isomerase-like TIM barrel ISU63_16130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_16130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_16135 PF05683 Fumarase C-terminus ISU63_16135 PF05681 Fumarate hydratase (Fumerase) ISU63_16145 PF00557 Metallopeptidase family M24 ISU63_16155 PF07715 TonB-dependent Receptor Plug Domain ISU63_16155 PF00593 TonB dependent receptor ISU63_16165 PF00034 Cytochrome c ISU63_16165 PF03150 Di-haem cytochrome c peroxidase ISU63_16165 PF14376 Haem-binding domain ISU63_16170 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_16185 PF01022 Bacterial regulatory protein, arsR family ISU63_16190 PF02040 Arsenical pump membrane protein ISU63_16195 PF13936 Helix-turn-helix domain ISU63_16195 PF04198 Putative sugar-binding domain ISU63_16200 PF02734 DAK2 domain ISU63_16205 PF02733 Dak1 domain ISU63_16215 PF00107 Zinc-binding dehydrogenase ISU63_16215 PF08240 Alcohol dehydrogenase GroES-like domain ISU63_16220 PF02502 Ribose/Galactose Isomerase ISU63_16225 PF00488 MutS domain V ISU63_16225 PF05190 MutS family domain IV ISU63_16225 PF05192 MutS domain III ISU63_16225 PF05188 MutS domain II ISU63_16225 PF01624 MutS domain I ISU63_16230 PF00140 Sigma-70 factor, region 1.2 ISU63_16230 PF04545 Sigma-70, region 4 ISU63_16230 PF04539 Sigma-70 region 3 ISU63_16230 PF04542 Sigma-70 region 2 ISU63_16235 PF01551 Peptidase family M23 ISU63_16235 PF01476 LysM domain ISU63_16245 PF01975 Survival protein SurE ISU63_16250 PF01142 tRNA pseudouridine synthase D (TruD) ISU63_16255 PF02542 YgbB family ISU63_16260 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU63_16265 PF04977 Septum formation initiator ISU63_16270 PF12084 Protein of unknown function (DUF3561) ISU63_16280 PF00009 Elongation factor Tu GTP binding domain ISU63_16285 PF01507 Phosphoadenosine phosphosulfate reductase family ISU63_16290 PF14824 Sirohaem biosynthesis protein central ISU63_16290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU63_16290 PF10414 Sirohaem synthase dimerisation region ISU63_16320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU63_16320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU63_16325 PF00175 Oxidoreductase NAD-binding domain ISU63_16325 PF00667 FAD binding domain ISU63_16325 PF00258 Flavodoxin ISU63_16330 PF01242 6-pyruvoyl tetrahydropterin synthase ISU63_16335 PF04055 Radical SAM superfamily ISU63_16340 PF00080 Copper/zinc superoxide dismutase (SODC) ISU63_16345 PF03952 Enolase, N-terminal domain ISU63_16345 PF00113 Enolase, C-terminal TIM barrel domain ISU63_16350 PF00117 Glutamine amidotransferase class-I ISU63_16350 PF06418 CTP synthase N-terminus ISU63_16355 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU63_16360 PF13291 ACT domain ISU63_16360 PF02824 TGS domain ISU63_16360 PF04607 Region found in RelA / SpoT proteins ISU63_16365 PF05958 tRNA (Uracil-5-)-methyltransferase ISU63_16365 PF01938 TRAM domain ISU63_16375 PF00072 Response regulator receiver domain ISU63_16375 PF00672 HAMP domain ISU63_16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_16375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU63_16375 PF00512 His Kinase A (phospho-acceptor) domain ISU63_16375 PF01627 Hpt domain ISU63_16380 PF00595 PDZ domain ISU63_16385 PF01966 HD domain ISU63_16385 PF13286 Phosphohydrolase-associated domain ISU63_16390 PF01048 Phosphorylase superfamily ISU63_16395 PF01497 Periplasmic binding protein ISU63_16400 PF03458 UPF0126 domain ISU63_16405 PF01521 Iron-sulphur cluster biosynthesis ISU63_16410 PF00654 Voltage gated chloride channel ISU63_16415 PF00202 Aminotransferase class-III ISU63_16420 PF01032 FecCD transport family ISU63_16425 PF01497 Periplasmic binding protein ISU63_16430 PF00005 ABC transporter ISU63_16435 PF14814 Bifunctional transglycosylase second domain ISU63_16435 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU63_16435 PF00912 Transglycosylase ISU63_16435 PF00905 Penicillin binding protein transpeptidase domain ISU63_16440 PF04408 Helicase associated domain (HA2) ISU63_16440 PF00270 DEAD/DEAH box helicase ISU63_16440 PF08482 ATP-dependent helicase C-terminal ISU63_16440 PF00271 Helicase conserved C-terminal domain ISU63_16445 PF02834 LigT like Phosphoesterase ISU63_16450 PF03749 Sugar fermentation stimulation protein RE domain ISU63_16450 PF17746 SfsA N-terminal OB domain ISU63_16455 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU63_16460 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU63_16465 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU63_16465 PF01743 Poly A polymerase head domain ISU63_16465 PF12626 Polymerase A arginine-rich C-terminus ISU63_16470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU63_16475 PF02548 Ketopantoate hydroxymethyltransferase ISU63_16480 PF02569 Pantoate-beta-alanine ligase ISU63_16485 PF02261 Aspartate decarboxylase ISU63_16495 PF01061 ABC-2 type transporter ISU63_16500 PF00005 ABC transporter ISU63_16505 PF00484 Carbonic anhydrase ISU63_16510 PF00156 Phosphoribosyl transferase domain ISU63_16515 PF07731 Multicopper oxidase ISU63_16515 PF07732 Multicopper oxidase ISU63_16515 PF00394 Multicopper oxidase ISU63_16515 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU63_16520 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU63_16525 PF17284 Spermidine synthase tetramerisation domain ISU63_16530 PF02675 S-adenosylmethionine decarboxylase ISU63_16535 PF00892 EamA-like transporter family ISU63_16540 PF06062 Uncharacterised protein family (UPF0231) ISU63_16545 PF00330 Aconitase family (aconitate hydratase) ISU63_16545 PF06434 Aconitate hydratase 2 N-terminus ISU63_16545 PF11791 Aconitate B N-terminal domain ISU63_16550 PF01797 Transposase IS200 like ISU63_16555 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_16555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU63_16560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU63_16560 PF02817 e3 binding domain ISU63_16560 PF00364 Biotin-requiring enzyme ISU63_16565 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU63_16565 PF00456 Transketolase, thiamine diphosphate binding domain ISU63_16570 PF07729 FCD domain ISU63_16570 PF00392 Bacterial regulatory proteins, gntR family ISU63_16575 PF00324 Amino acid permease ISU63_16580 PF17113 Regulatory signalling modulator protein AmpE ISU63_16585 PF01510 N-acetylmuramoyl-L-alanine amidase ISU63_16590 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU63_16590 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU63_16595 PF07963 Prokaryotic N-terminal methylation motif ISU63_16600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU63_16600 PF00437 Type II/IV secretion system protein ISU63_16605 PF00482 Type II secretion system (T2SS), protein F ISU63_16610 PF00478 IMP dehydrogenase / GMP reductase domain ISU63_16615 PF01121 Dephospho-CoA kinase ISU63_16620 PF07072 Cell division protein ISU63_16625 PF03884 DNA gyrase inhibitor YacG ISU63_16635 PF02796 Helix-turn-helix domain of resolvase ISU63_16635 PF00665 Integrase core domain ISU63_16640 PF01695 IstB-like ATP binding protein ISU63_16645 PF01119 DNA mismatch repair protein, C-terminal domain ISU63_16645 PF08676 MutL C terminal dimerisation domain ISU63_16655 PF13356 Arm DNA-binding domain ISU63_16655 PF00589 Phage integrase family ISU63_16665 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU63_16670 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU63_16675 PF00883 Cytosol aminopeptidase family, catalytic domain ISU63_16675 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU63_16680 PF04364 DNA polymerase III chi subunit, HolC ISU63_16685 PF10458 Valyl tRNA synthetase tRNA binding arm ISU63_16685 PF00133 tRNA synthetases class I (I, L, M and V) ISU63_16685 PF08264 Anticodon-binding domain of tRNA ISU63_16690 PF00583 Acetyltransferase (GNAT) family ISU63_16695 PF06877 Regulator of ribonuclease activity B ISU63_16700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU63_16700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU63_16705 PF04074 YhcH/YjgK/YiaL ISU63_16715 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_16720 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_16720 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU63_16725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_16725 PF00005 ABC transporter ISU63_16730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_16730 PF00005 ABC transporter ISU63_16735 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU63_16735 PF03477 ATP cone domain ISU63_16745 PF00392 Bacterial regulatory proteins, gntR family ISU63_16745 PF07702 UTRA domain ISU63_16750 PF06754 Phosphonate metabolism protein PhnG ISU63_16755 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU63_16760 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU63_16765 PF06007 Phosphonate metabolism protein PhnJ ISU63_16770 PF00005 ABC transporter ISU63_16775 PF00005 ABC transporter ISU63_16780 PF07969 Amidohydrolase family ISU63_16790 PF12706 Beta-lactamase superfamily domain ISU63_16795 PF13460 NAD(P)H-binding ISU63_16810 PF00005 ABC transporter ISU63_16810 PF03459 TOBE domain ISU63_16810 PF17912 MalK OB fold domain ISU63_16815 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_16820 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_16825 PF13416 Bacterial extracellular solute-binding protein ISU63_16840 PF01541 GIY-YIG catalytic domain ISU63_16845 PF13508 Acetyltransferase (GNAT) domain ISU63_16850 PF02036 SCP-2 sterol transfer family ISU63_16855 PF01136 Peptidase family U32 ISU63_16860 PF01136 Peptidase family U32 ISU63_16865 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU63_16865 PF02321 Outer membrane efflux protein ISU63_16870 PF00873 AcrB/AcrD/AcrF family ISU63_16875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_16875 PF00529 HlyD membrane-fusion protein of T1SS ISU63_16880 PF00296 Luciferase-like monooxygenase ISU63_16890 PF01381 Helix-turn-helix ISU63_16900 PF00271 Helicase conserved C-terminal domain ISU63_16900 PF00270 DEAD/DEAH box helicase ISU63_16900 PF12343 Cold shock protein DEAD box A ISU63_16900 PF03880 DbpA RNA binding domain ISU63_16910 PF13181 Tetratricopeptide repeat ISU63_16910 PF07719 Tetratricopeptide repeat ISU63_16915 PF00575 S1 RNA binding domain ISU63_16915 PF03725 3' exoribonuclease family, domain 2 ISU63_16915 PF01138 3' exoribonuclease family, domain 1 ISU63_16915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU63_16915 PF00013 KH domain ISU63_16925 PF00700 Bacterial flagellin C-terminal helical region ISU63_16925 PF00669 Bacterial flagellin N-terminal helical region ISU63_16930 PF00486 Transcriptional regulatory protein, C terminal ISU63_16930 PF18500 CadC C-terminal domain 1 ISU63_16950 PF00460 Flagella basal body rod protein ISU63_16950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_16960 PF02119 Flagellar P-ring protein ISU63_16965 PF02107 Flagellar L-ring protein ISU63_16970 PF00460 Flagella basal body rod protein ISU63_16970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_16975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_16975 PF00460 Flagella basal body rod protein ISU63_16980 PF07559 Flagellar basal body protein FlaE ISU63_16980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_16980 PF00460 Flagella basal body rod protein ISU63_16985 PF13861 FlgD Tudor-like domain ISU63_16985 PF03963 Flagellar hook capping protein - N-terminal region ISU63_16985 PF13860 FlgD Ig-like domain ISU63_16990 PF00460 Flagella basal body rod protein ISU63_16990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU63_16995 PF00460 Flagella basal body rod protein ISU63_17000 PF13144 Chaperone for flagella basal body P-ring formation ISU63_17020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU63_17020 PF18269 T3SS EscN ATPase C-terminal domain ISU63_17035 PF08345 Flagellar M-ring protein C-terminal ISU63_17035 PF01514 Secretory protein of YscJ/FliF family ISU63_17040 PF02049 Flagellar hook-basal body complex protein FliE ISU63_17045 PF00158 Sigma-54 interaction domain ISU63_17045 PF02954 Bacterial regulatory protein, Fis family ISU63_17045 PF00072 Response regulator receiver domain ISU63_17055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU63_17060 PF00813 FliP family ISU63_17065 PF01313 Bacterial export proteins, family 3 ISU63_17070 PF01311 Bacterial export proteins, family 1 ISU63_17075 PF01312 FlhB HrpN YscU SpaS Family ISU63_17080 PF00771 FHIPEP family ISU63_17095 PF01497 Periplasmic binding protein ISU63_17100 PF00419 Fimbrial protein ISU63_17100 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU63_17105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_17105 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_17110 PF00577 Outer membrane usher protein ISU63_17110 PF13954 PapC N-terminal domain ISU63_17110 PF13953 PapC C-terminal domain ISU63_17130 PF04972 BON domain ISU63_17130 PF00263 Bacterial type II and III secretion system protein ISU63_17130 PF13629 Pilus formation protein N terminal region ISU63_17135 PF04972 BON domain ISU63_17135 PF00263 Bacterial type II and III secretion system protein ISU63_17135 PF13629 Pilus formation protein N terminal region ISU63_17150 PF00437 Type II/IV secretion system protein ISU63_17185 PF02472 Biopolymer transport protein ExbD/TolR ISU63_17190 PF01618 MotA/TolQ/ExbB proton channel family ISU63_17195 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU63_17200 PF09335 SNARE associated Golgi protein ISU63_17205 PF06719 AraC-type transcriptional regulator N-terminus ISU63_17205 PF12833 Helix-turn-helix domain ISU63_17210 PF00465 Iron-containing alcohol dehydrogenase ISU63_17220 PF00248 Aldo/keto reductase family ISU63_17230 PF07731 Multicopper oxidase ISU63_17230 PF07732 Multicopper oxidase ISU63_17235 PF01553 Acyltransferase ISU63_17240 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU63_17240 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU63_17250 PF02525 Flavodoxin-like fold ISU63_17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_17255 PF03466 LysR substrate binding domain ISU63_17260 PF00204 DNA gyrase B ISU63_17260 PF00986 DNA gyrase B subunit, carboxyl terminus ISU63_17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_17260 PF01751 Toprim domain ISU63_17265 PF05728 Uncharacterised protein family (UPF0227) ISU63_17270 PF00149 Calcineurin-like phosphoesterase ISU63_17275 PF06853 Protein of unknown function (DUF1249) ISU63_17280 PF00293 NUDIX domain ISU63_17285 PF02321 Outer membrane efflux protein ISU63_17290 PF06693 Protein of unknown function (DUF1190) ISU63_17295 PF03738 Glutathionylspermidine synthase preATP-grasp ISU63_17300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU63_17305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU63_17310 PF04380 Membrane fusogenic activity ISU63_17320 PF13520 Amino acid permease ISU63_17325 PF00294 pfkB family carbohydrate kinase ISU63_17325 PF01467 Cytidylyltransferase-like ISU63_17330 PF08335 GlnD PII-uridylyltransferase ISU63_17330 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU63_17335 PF01928 CYTH domain ISU63_17340 PF08239 Bacterial SH3 domain ISU63_17345 PF01966 HD domain ISU63_17345 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU63_17345 PF01743 Poly A polymerase head domain ISU63_17350 PF02673 Bacitracin resistance protein BacA ISU63_17355 PF02152 Dihydroneopterin aldolase ISU63_17360 PF02660 Glycerol-3-phosphate acyltransferase ISU63_17365 PF00814 Glycoprotease family ISU63_17370 PF01165 Ribosomal protein S21 ISU63_17375 PF01807 CHC2 zinc finger ISU63_17375 PF08275 DNA primase catalytic core, N-terminal domain ISU63_17375 PF08278 DNA primase DnaG DnaB-binding ISU63_17375 PF10410 DnaB-helicase binding domain of primase ISU63_17380 PF04542 Sigma-70 region 2 ISU63_17380 PF04545 Sigma-70, region 4 ISU63_17380 PF00140 Sigma-70 factor, region 1.2 ISU63_17380 PF03979 Sigma-70 factor, region 1.1 ISU63_17380 PF04539 Sigma-70 region 3 ISU63_17380 PF04546 Sigma-70, non-essential region ISU63_17425 PF03466 LysR substrate binding domain ISU63_17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_17445 PF01042 Endoribonuclease L-PSP ISU63_17465 PF00155 Aminotransferase class I and II ISU63_17480 PF00529 HlyD membrane-fusion protein of T1SS ISU63_17480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_17485 PF04632 Fusaric acid resistance protein family ISU63_17495 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU63_17495 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU63_17495 PF14310 Fibronectin type III-like domain ISU63_17505 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_17510 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_17515 PF01547 Bacterial extracellular solute-binding protein ISU63_17520 PF00356 Bacterial regulatory proteins, lacI family ISU63_17525 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU63_17530 PF03459 TOBE domain ISU63_17530 PF17912 MalK OB fold domain ISU63_17530 PF00005 ABC transporter ISU63_17550 PF05860 haemagglutination activity domain ISU63_17550 PF13018 Extended Signal Peptide of Type V secretion system ISU63_17550 PF13332 Hemagglutinin repeat ISU63_17550 PF04829 Pre-toxin domain with VENN motif ISU63_17555 PF04829 Pre-toxin domain with VENN motif ISU63_17555 PF05860 haemagglutination activity domain ISU63_17555 PF13332 Hemagglutinin repeat ISU63_17555 PF13018 Extended Signal Peptide of Type V secretion system ISU63_17570 PF13332 Hemagglutinin repeat ISU63_17570 PF04829 Pre-toxin domain with VENN motif ISU63_17575 PF13332 Hemagglutinin repeat ISU63_17575 PF04829 Pre-toxin domain with VENN motif ISU63_17585 PF04829 Pre-toxin domain with VENN motif ISU63_17585 PF13018 Extended Signal Peptide of Type V secretion system ISU63_17585 PF05860 haemagglutination activity domain ISU63_17585 PF13332 Hemagglutinin repeat ISU63_17590 PF17287 POTRA domain ISU63_17590 PF08479 POTRA domain, ShlB-type ISU63_17590 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU63_17595 PF00092 von Willebrand factor type A domain ISU63_17600 PF02342 TerD domain ISU63_17610 PF00092 von Willebrand factor type A domain ISU63_17625 PF03729 Short repeat of unknown function (DUF308) ISU63_17630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_17630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU63_17635 PF05175 Methyltransferase small domain ISU63_17640 PF03797 Autotransporter beta-domain ISU63_17645 PF01863 Protein of unknown function DUF45 ISU63_17650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU63_17655 PF00375 Sodium:dicarboxylate symporter family ISU63_17660 PF01797 Transposase IS200 like ISU63_17665 PF10688 Bacterial inner membrane protein ISU63_17670 PF08666 SAF domain ISU63_17670 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU63_17675 PF01232 Mannitol dehydrogenase Rossmann domain ISU63_17675 PF08125 Mannitol dehydrogenase C-terminal domain ISU63_17680 PF02614 Glucuronate isomerase ISU63_17685 PF07690 Major Facilitator Superfamily ISU63_17690 PF00392 Bacterial regulatory proteins, gntR family ISU63_17690 PF07729 FCD domain ISU63_17700 PF09335 SNARE associated Golgi protein ISU63_17705 PF13721 SecD export protein N-terminal TM region ISU63_17715 PF05957 Bacterial protein of unknown function (DUF883) ISU63_17720 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU63_17730 PF07681 DoxX ISU63_17740 PF00665 Integrase core domain ISU63_17740 PF02796 Helix-turn-helix domain of resolvase ISU63_17745 PF01695 IstB-like ATP binding protein ISU63_17750 PF00293 NUDIX domain ISU63_17760 PF07516 SecA Wing and Scaffold domain ISU63_17760 PF02810 SEC-C motif ISU63_17760 PF07517 SecA DEAD-like domain ISU63_17760 PF01043 SecA preprotein cross-linking domain ISU63_17765 PF06558 Secretion monitor precursor protein (SecM) ISU63_17775 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU63_17780 PF12327 FtsZ family, C-terminal domain ISU63_17780 PF00091 Tubulin/FtsZ family, GTPase domain ISU63_17785 PF02491 SHS2 domain inserted in FTSA ISU63_17790 PF08478 POTRA domain, FtsQ-type ISU63_17790 PF03799 Cell division protein FtsQ ISU63_17795 PF07478 D-ala D-ala ligase C-terminus ISU63_17795 PF01820 D-ala D-ala ligase N-terminus ISU63_17800 PF01225 Mur ligase family, catalytic domain ISU63_17800 PF02875 Mur ligase family, glutamate ligase domain ISU63_17800 PF08245 Mur ligase middle domain ISU63_17805 PF04101 Glycosyltransferase family 28 C-terminal domain ISU63_17805 PF03033 Glycosyltransferase family 28 N-terminal domain ISU63_17810 PF01098 Cell cycle protein ISU63_17815 PF02875 Mur ligase family, glutamate ligase domain ISU63_17815 PF08245 Mur ligase middle domain ISU63_17820 PF00953 Glycosyl transferase family 4 ISU63_17820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU63_17825 PF02875 Mur ligase family, glutamate ligase domain ISU63_17825 PF08245 Mur ligase middle domain ISU63_17825 PF01225 Mur ligase family, catalytic domain ISU63_17830 PF02875 Mur ligase family, glutamate ligase domain ISU63_17830 PF08245 Mur ligase middle domain ISU63_17830 PF01225 Mur ligase family, catalytic domain ISU63_17835 PF00905 Penicillin binding protein transpeptidase domain ISU63_17835 PF03717 Penicillin-binding Protein dimerisation domain ISU63_17840 PF04999 Cell division protein FtsL ISU63_17845 PF01795 MraW methylase family ISU63_17850 PF02381 MraZ protein, putative antitoxin-like ISU63_17860 PF06610 L-alanine exporter ISU63_17865 PF00356 Bacterial regulatory proteins, lacI family ISU63_17865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU63_17870 PF01797 Transposase IS200 like ISU63_17875 PF10369 Small subunit of acetolactate synthase ISU63_17880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU63_17880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU63_17880 PF00205 Thiamine pyrophosphate enzyme, central domain ISU63_17885 PF00501 AMP-binding enzyme ISU63_17890 PF03466 LysR substrate binding domain ISU63_17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_17900 PF01797 Transposase IS200 like ISU63_17905 PF05173 Dihydrodipicolinate reductase, C-terminus ISU63_17905 PF01113 Dihydrodipicolinate reductase, N-terminus ISU63_17910 PF00117 Glutamine amidotransferase class-I ISU63_17910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU63_17915 PF02142 MGS-like domain ISU63_17915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU63_17915 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU63_17920 PF01810 LysE type translocator ISU63_17925 PF06738 Putative threonine/serine exporter ISU63_17930 PF12821 Threonine/Serine exporter, ThrE ISU63_17935 PF00186 Dihydrofolate reductase ISU63_17940 PF01797 Transposase IS200 like ISU63_17955 PF00149 Calcineurin-like phosphoesterase ISU63_17960 PF04379 ApaG domain ISU63_17965 PF00398 Ribosomal RNA adenine dimethylase ISU63_17970 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU63_17975 PF00639 PPIC-type PPIASE domain ISU63_17975 PF09312 SurA N-terminal domain ISU63_17980 PF03968 OstA-like protein ISU63_17980 PF04453 LPS transport system D ISU63_17985 PF00226 DnaJ domain ISU63_17985 PF05099 Tellurite resistance protein TerB ISU63_17990 PF00849 RNA pseudouridylate synthase ISU63_18005 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU63_18010 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU63_18025 PF05947 Type VI secretion system, TssF ISU63_18035 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_18035 PF17871 AAA lid domain ISU63_18035 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_18035 PF07724 AAA domain (Cdc48 subfamily) ISU63_18040 PF06715 Gp5 C-terminal repeat (3 copies) ISU63_18040 PF04717 Type VI secretion system, phage-baseplate injector ISU63_18070 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU63_18075 PF00691 OmpA family ISU63_18075 PF05736 OprF membrane domain ISU63_18090 PF18339 RapA N-terminal Tudor like domain 1 ISU63_18090 PF00176 SNF2 family N-terminal domain ISU63_18090 PF12137 RNA polymerase recycling family C-terminal ISU63_18090 PF00271 Helicase conserved C-terminal domain ISU63_18090 PF18337 RapA N-terminal Tudor like domain ISU63_18095 PF00136 DNA polymerase family B ISU63_18095 PF03104 DNA polymerase family B, exonuclease domain ISU63_18100 PF09335 SNARE associated Golgi protein ISU63_18105 PF00005 ABC transporter ISU63_18110 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_18120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_18120 PF12793 Sugar transport-related sRNA regulator N-term ISU63_18125 PF07690 Major Facilitator Superfamily ISU63_18130 PF00694 Aconitase C-terminal domain ISU63_18135 PF00330 Aconitase family (aconitate hydratase) ISU63_18140 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU63_18145 PF08502 LeuA allosteric (dimerisation) domain ISU63_18145 PF00682 HMGL-like ISU63_18150 PF01797 Transposase IS200 like ISU63_18155 PF02401 LytB protein ISU63_18160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU63_18165 PF01252 Signal peptidase (SPase) II ISU63_18170 PF06827 Zinc finger found in FPG and IleRS ISU63_18170 PF00133 tRNA synthetases class I (I, L, M and V) ISU63_18170 PF08264 Anticodon-binding domain of tRNA ISU63_18175 PF06574 FAD synthetase ISU63_18175 PF01687 Riboflavin kinase ISU63_18180 PF01649 Ribosomal protein S20 ISU63_18185 PF03466 LysR substrate binding domain ISU63_18185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_18190 PF06965 Na+/H+ antiporter 1 ISU63_18195 PF00226 DnaJ domain ISU63_18195 PF01556 DnaJ C terminal domain ISU63_18195 PF00684 DnaJ central domain ISU63_18200 PF00012 Hsp70 protein ISU63_18205 PF01184 GPR1/FUN34/yaaH family ISU63_18215 PF07690 Major Facilitator Superfamily ISU63_18220 PF00994 Probable molybdopterin binding domain ISU63_18225 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU63_18235 PF03883 Peroxide stress protein YaaA ISU63_18240 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_18240 PF14821 Threonine synthase N terminus ISU63_18245 PF00288 GHMP kinases N terminal domain ISU63_18245 PF08544 GHMP kinases C terminal ISU63_18250 PF13840 ACT domain ISU63_18250 PF00696 Amino acid kinase family ISU63_18250 PF01842 ACT domain ISU63_18250 PF00742 Homoserine dehydrogenase ISU63_18250 PF03447 Homoserine dehydrogenase, NAD binding domain ISU63_18255 PF08254 Threonine leader peptide ISU63_18260 PF00072 Response regulator receiver domain ISU63_18260 PF00486 Transcriptional regulatory protein, C terminal ISU63_18265 PF05981 CreA protein ISU63_18270 PF12833 Helix-turn-helix domain ISU63_18270 PF06445 GyrI-like small molecule binding domain ISU63_18275 PF00300 Histidine phosphatase superfamily (branch 1) ISU63_18280 PF01931 Protein of unknown function DUF84 ISU63_18285 PF01371 Trp repressor protein ISU63_18290 PF01464 Transglycosylase SLT domain ISU63_18290 PF14718 Soluble lytic murein transglycosylase L domain ISU63_18295 PF00689 Cation transporting ATPase, C-terminus ISU63_18295 PF00690 Cation transporter/ATPase, N-terminus ISU63_18305 PF17152 Periplasmic sensor domain ISU63_18305 PF00990 Diguanylate cyclase, GGDEF domain ISU63_18310 PF00691 OmpA family ISU63_18320 PF02661 Fic/DOC family ISU63_18325 PF01381 Helix-turn-helix ISU63_18325 PF13521 AAA domain ISU63_18330 PF18073 Rubredoxin metal binding domain ISU63_18335 PF18429 Domain of unknown function (DUF5609) ISU63_18340 PF10144 Bacterial virulence factor haemolysin ISU63_18345 PF01048 Phosphorylase superfamily ISU63_18350 PF01676 Metalloenzyme superfamily ISU63_18360 PF01791 DeoC/LacD family aldolase ISU63_18365 PF07670 Nucleoside recognition ISU63_18365 PF01773 Na+ dependent nucleoside transporter N-terminus ISU63_18365 PF07662 Na+ dependent nucleoside transporter C-terminus ISU63_18370 PF01026 TatD related DNase ISU63_18375 PF01734 Patatin-like phospholipase ISU63_18380 PF07043 Protein of unknown function (DUF1328) ISU63_18385 PF04972 BON domain ISU63_18390 PF16658 Class II release factor RF3, C-terminal domain ISU63_18390 PF03144 Elongation factor Tu domain 2 ISU63_18390 PF00009 Elongation factor Tu GTP binding domain ISU63_18395 PF00583 Acetyltransferase (GNAT) family ISU63_18400 PF03603 DNA polymerase III psi subunit ISU63_18405 PF05175 Methyltransferase small domain ISU63_18405 PF08468 Methyltransferase small domain N-terminal ISU63_18415 PF07256 Protein of unknown function (DUF1435) ISU63_18420 PF00990 Diguanylate cyclase, GGDEF domain ISU63_18425 PF01095 Pectinesterase ISU63_18440 PF00873 AcrB/AcrD/AcrF family ISU63_18445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU63_18460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU63_18465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_18465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_18475 PF00005 ABC transporter ISU63_18480 PF02653 Branched-chain amino acid transport system / permease component ISU63_18485 PF02653 Branched-chain amino acid transport system / permease component ISU63_18490 PF13407 Periplasmic binding protein domain ISU63_18495 PF01791 DeoC/LacD family aldolase ISU63_18500 PF03992 Antibiotic biosynthesis monooxygenase ISU63_18505 PF10696 Protein of unknown function (DUF2501) ISU63_18510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU63_18510 PF00381 PTS HPr component phosphorylation site ISU63_18510 PF00391 PEP-utilising enzyme, mobile domain ISU63_18510 PF02896 PEP-utilising enzyme, TIM barrel domain ISU63_18510 PF05524 PEP-utilising enzyme, N-terminal ISU63_18520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU63_18525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU63_18530 PF12833 Helix-turn-helix domain ISU63_18540 PF05987 Bacterial protein of unknown function (DUF898) ISU63_18580 PF01555 DNA methylase ISU63_18595 PF07728 AAA domain (dynein-related subfamily) ISU63_18595 PF12102 Domain of unknown function (DUF3578) ISU63_18600 PF00665 Integrase core domain ISU63_18600 PF02796 Helix-turn-helix domain of resolvase ISU63_18605 PF01695 IstB-like ATP binding protein ISU63_18610 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU63_18615 PF03631 Virulence factor BrkB ISU63_18620 PF13419 Haloacid dehalogenase-like hydrolase ISU63_18625 PF00009 Elongation factor Tu GTP binding domain ISU63_18625 PF03144 Elongation factor Tu domain 2 ISU63_18625 PF00679 Elongation factor G C-terminus ISU63_18630 PF03951 Glutamine synthetase, beta-Grasp domain ISU63_18630 PF00120 Glutamine synthetase, catalytic domain ISU63_18635 PF00989 PAS fold ISU63_18635 PF00512 His Kinase A (phospho-acceptor) domain ISU63_18635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_18640 PF02954 Bacterial regulatory protein, Fis family ISU63_18640 PF00072 Response regulator receiver domain ISU63_18640 PF00158 Sigma-54 interaction domain ISU63_18645 PF04055 Radical SAM superfamily ISU63_18645 PF06969 HemN C-terminal domain ISU63_18650 PF04220 Der GTPase activator (YihI) ISU63_18655 PF01926 50S ribosome-binding GTPase ISU63_18660 PF01797 Transposase IS200 like ISU63_18670 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU63_18670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU63_18670 PF00476 DNA polymerase family A ISU63_18670 PF01612 3'-5' exonuclease ISU63_18675 PF01323 DSBA-like thioredoxin domain ISU63_18680 PF01636 Phosphotransferase enzyme family ISU63_18685 PF06288 Protein of unknown function (DUF1040) ISU63_18690 PF12804 MobA-like NTP transferase domain ISU63_18695 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU63_18700 PF00872 Transposase, Mutator family ISU63_18725 PF00665 Integrase core domain ISU63_18725 PF02796 Helix-turn-helix domain of resolvase ISU63_18730 PF01695 IstB-like ATP binding protein ISU63_18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_18740 PF03466 LysR substrate binding domain ISU63_18745 PF02678 Pirin ISU63_18745 PF17954 Quercetinase C-terminal cupin domain ISU63_18755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU63_18765 PF02021 Uncharacterised protein family UPF0102 ISU63_18770 PF13580 SIS domain ISU63_18775 PF04972 BON domain ISU63_18780 PF00912 Transglycosylase ISU63_18790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_18790 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU63_18790 PF00512 His Kinase A (phospho-acceptor) domain ISU63_18790 PF00989 PAS fold ISU63_18790 PF00072 Response regulator receiver domain ISU63_18790 PF01627 Hpt domain ISU63_18795 PF04055 Radical SAM superfamily ISU63_18795 PF16199 Radical_SAM C-terminal domain ISU63_18800 PF01493 GXGXG motif ISU63_18800 PF01645 Conserved region in glutamate synthase ISU63_18800 PF04898 Glutamate synthase central domain ISU63_18800 PF00310 Glutamine amidotransferases class-II ISU63_18805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU63_18805 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_18815 PF04386 Stringent starvation protein B ISU63_18820 PF02798 Glutathione S-transferase, N-terminal domain ISU63_18820 PF00043 Glutathione S-transferase, C-terminal domain ISU63_18830 PF00380 Ribosomal protein S9/S16 ISU63_18835 PF00572 Ribosomal protein L13 ISU63_18840 PF03969 AFG1-like ATPase ISU63_18845 PF06295 Protein of unknown function (DUF1043) ISU63_18850 PF00595 PDZ domain ISU63_18850 PF13180 PDZ domain ISU63_18855 PF01797 Transposase IS200 like ISU63_18860 PF13180 PDZ domain ISU63_18865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU63_18870 PF01722 BolA-like protein ISU63_18875 PF13466 STAS domain ISU63_18880 PF05494 MlaC protein ISU63_18885 PF02470 MlaD protein ISU63_18890 PF02405 Permease MlaE ISU63_18895 PF00005 ABC transporter ISU63_18900 PF01699 Sodium/calcium exchanger protein ISU63_18905 PF00571 CBS domain ISU63_18905 PF01380 SIS domain ISU63_18915 PF06835 Lipopolysaccharide-assembly, LptC-related ISU63_18920 PF03968 OstA-like protein ISU63_18925 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU63_18925 PF00005 ABC transporter ISU63_18930 PF04552 Sigma-54, DNA binding domain ISU63_18930 PF04963 Sigma-54 factor, core binding domain ISU63_18930 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU63_18940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU63_18945 PF03668 P-loop ATPase protein family ISU63_18950 PF00381 PTS HPr component phosphorylation site ISU63_18955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU63_18955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU63_18960 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU63_18960 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU63_18965 PF01042 Endoribonuclease L-PSP ISU63_18975 PF00356 Bacterial regulatory proteins, lacI family ISU63_18980 PF02378 Phosphotransferase system, EIIC ISU63_18980 PF00367 phosphotransferase system, EIIB ISU63_18985 PF00128 Alpha amylase, catalytic domain ISU63_18985 PF11941 Domain of unknown function (DUF3459) ISU63_18990 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU63_18990 PF14760 Rnk N-terminus ISU63_18995 PF07361 Cytochrome b562 ISU63_19005 PF01523 Putative modulator of DNA gyrase ISU63_19010 PF04751 Protein of unknown function (DUF615) ISU63_19015 PF01337 Barstar (barnase inhibitor) ISU63_19030 PF04632 Fusaric acid resistance protein family ISU63_19035 PF13533 Biotin-lipoyl like ISU63_19040 PF07869 Protein of unknown function (DUF1656) ISU63_19045 PF03466 LysR substrate binding domain ISU63_19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_19050 PF03466 LysR substrate binding domain ISU63_19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU63_19060 PF18413 Neuraminidase-like domain ISU63_19060 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU63_19065 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU63_19065 PF03534 Salmonella virulence plasmid 65kDa B protein ISU63_19065 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU63_19085 PF18807 Tripartite Tc toxins repeat ISU63_19085 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU63_19090 PF14431 YwqJ-like deaminase ISU63_19090 PF18807 Tripartite Tc toxins repeat ISU63_19095 PF01523 Putative modulator of DNA gyrase ISU63_19100 PF00795 Carbon-nitrogen hydrolase ISU63_19105 PF13116 Protein of unknown function ISU63_19105 PF13502 AsmA-like C-terminal region ISU63_19110 PF00575 S1 RNA binding domain ISU63_19110 PF10150 Ribonuclease E/G family ISU63_19115 PF02545 Maf-like protein ISU63_19120 PF04093 rod shape-determining protein MreD ISU63_19125 PF04085 rod shape-determining protein MreC ISU63_19135 PF00990 Diguanylate cyclase, GGDEF domain ISU63_19135 PF17157 Gammaproteobacterial periplasmic sensor domain ISU63_19135 PF00563 EAL domain ISU63_19140 PF08240 Alcohol dehydrogenase GroES-like domain ISU63_19140 PF00107 Zinc-binding dehydrogenase ISU63_19145 PF00174 Oxidoreductase molybdopterin binding domain ISU63_19150 PF01794 Ferric reductase like transmembrane component ISU63_19155 PF01220 Dehydroquinase class II ISU63_19160 PF00364 Biotin-requiring enzyme ISU63_19165 PF00289 Biotin carboxylase, N-terminal domain ISU63_19165 PF02785 Biotin carboxylase C-terminal domain ISU63_19165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU63_19175 PF06196 Protein of unknown function (DUF997) ISU63_19180 PF00474 Sodium:solute symporter family ISU63_19190 PF01207 Dihydrouridine synthase (Dus) ISU63_19195 PF02954 Bacterial regulatory protein, Fis family ISU63_19220 PF07690 Major Facilitator Superfamily ISU63_19225 PF02627 Carboxymuconolactone decarboxylase family ISU63_19230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU63_19230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU63_19235 PF00753 Metallo-beta-lactamase superfamily ISU63_19240 PF05433 Glycine zipper 2TM domain ISU63_19245 PF00313 'Cold-shock' DNA-binding domain ISU63_19250 PF00313 'Cold-shock' DNA-binding domain ISU63_19270 PF02798 Glutathione S-transferase, N-terminal domain ISU63_19275 PF00571 CBS domain ISU63_19275 PF01380 SIS domain ISU63_19280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_19280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_19290 PF02653 Branched-chain amino acid transport system / permease component ISU63_19295 PF00005 ABC transporter ISU63_19305 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU63_19315 PF00999 Sodium/hydrogen exchanger family ISU63_19320 PF00860 Permease family ISU63_19325 PF04221 RelB antitoxin ISU63_19335 PF00005 ABC transporter ISU63_19340 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_19345 PF00296 Luciferase-like monooxygenase ISU63_19350 PF09084 NMT1/THI5 like ISU63_19355 PF03358 NADPH-dependent FMN reductase ISU63_19360 PF01791 DeoC/LacD family aldolase ISU63_19365 PF00294 pfkB family carbohydrate kinase ISU63_19370 PF05025 RbsD / FucU transport protein family ISU63_19375 PF02311 AraC-like ligand binding domain ISU63_19375 PF12833 Helix-turn-helix domain ISU63_19400 PF05593 RHS Repeat ISU63_19400 PF03527 RHS protein ISU63_19410 PF04717 Type VI secretion system, phage-baseplate injector ISU63_19440 PF03527 RHS protein ISU63_19440 PF05593 RHS Repeat ISU63_19455 PF04717 Type VI secretion system, phage-baseplate injector ISU63_19490 PF17871 AAA lid domain ISU63_19490 PF00004 ATPase family associated with various cellular activities (AAA) ISU63_19490 PF07724 AAA domain (Cdc48 subfamily) ISU63_19490 PF10431 C-terminal, D2-small domain, of ClpB protein ISU63_19500 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU63_19545 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU63_19545 PF01266 FAD dependent oxidoreductase ISU63_19550 PF00343 Carbohydrate phosphorylase ISU63_19555 PF00534 Glycosyl transferases group 1 ISU63_19555 PF08323 Starch synthase catalytic domain ISU63_19565 PF18390 Glycogen debranching enzyme C-terminal domain ISU63_19565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU63_19565 PF00128 Alpha amylase, catalytic domain ISU63_19570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU63_19570 PF02806 Alpha amylase, C-terminal all-beta domain ISU63_19570 PF00128 Alpha amylase, catalytic domain ISU63_19575 PF06580 Histidine kinase ISU63_19575 PF07694 5TMR of 5TMR-LYT ISU63_19580 PF02369 Bacterial Ig-like domain (group 1) ISU63_19580 PF09134 Invasin, domain 3 ISU63_19580 PF07979 Intimin C-type lectin domain ISU63_19580 PF11924 Inverse autotransporter, beta-domain ISU63_19610 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU63_19610 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU63_19615 PF01914 MarC family integral membrane protein ISU63_19630 PF01202 Shikimate kinase ISU63_19635 PF02447 GntP family permease ISU63_19640 PF00356 Bacterial regulatory proteins, lacI family ISU63_19640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU63_19645 PF17954 Quercetinase C-terminal cupin domain ISU63_19645 PF02678 Pirin ISU63_19655 PF00486 Transcriptional regulatory protein, C terminal ISU63_19655 PF00072 Response regulator receiver domain ISU63_19665 PF01116 Fructose-bisphosphate aldolase class-II ISU63_19675 PF13407 Periplasmic binding protein domain ISU63_19680 PF02653 Branched-chain amino acid transport system / permease component ISU63_19685 PF00005 ABC transporter ISU63_19690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_19690 PF00072 Response regulator receiver domain ISU63_19690 PF13188 PAS domain ISU63_19690 PF08448 PAS fold ISU63_19690 PF00512 His Kinase A (phospho-acceptor) domain ISU63_19700 PF01384 Phosphate transporter family ISU63_19710 PF10625 Universal stress protein B (UspB) ISU63_19715 PF00582 Universal stress protein family ISU63_19720 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU63_19720 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU63_19725 PF08548 Peptidase M10 serralysin C terminal ISU63_19725 PF00413 Matrixin ISU63_19725 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU63_19730 PF04445 Putative SAM-dependent methyltransferase ISU63_19735 PF01432 Peptidase family M3 ISU63_19740 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU63_19745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU63_19745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU63_19750 PF05651 Putative sugar diacid recognition ISU63_19750 PF13556 PucR C-terminal helix-turn-helix domain ISU63_19750 PF17853 GGDEF-like domain ISU63_19760 PF02447 GntP family permease ISU63_19765 PF02595 Glycerate kinase family ISU63_19790 PF03631 Virulence factor BrkB ISU63_19795 PF02611 CDP-diacylglycerol pyrophosphatase ISU63_19800 PF05170 AsmA family ISU63_19805 PF00563 EAL domain ISU63_19810 PF01361 Tautomerase enzyme ISU63_19815 PF00294 pfkB family carbohydrate kinase ISU63_19820 PF00675 Insulinase (Peptidase family M16) ISU63_19820 PF05193 Peptidase M16 inactive domain ISU63_19825 PF00375 Sodium:dicarboxylate symporter family ISU63_19835 PF06917 Periplasmic pectate lyase ISU63_19840 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU63_19845 PF00672 HAMP domain ISU63_19845 PF00990 Diguanylate cyclase, GGDEF domain ISU63_19845 PF00563 EAL domain ISU63_19845 PF17154 Gammaproteobacterial periplasmic sensor domain ISU63_19850 PF01270 Glycosyl hydrolases family 8 ISU63_19855 PF00005 ABC transporter ISU63_19855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_19860 PF00005 ABC transporter ISU63_19860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU63_19865 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU63_19865 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_19870 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_19875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU63_19880 PF08479 POTRA domain, ShlB-type ISU63_19880 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU63_19880 PF17287 POTRA domain ISU63_19885 PF05860 haemagglutination activity domain ISU63_19885 PF13332 Hemagglutinin repeat ISU63_19885 PF04829 Pre-toxin domain with VENN motif ISU63_19885 PF05594 Haemagluttinin repeat ISU63_19890 PF01797 Transposase IS200 like ISU63_19900 PF07690 Major Facilitator Superfamily ISU63_19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU63_19905 PF05231 MASE1 ISU63_19905 PF07730 Histidine kinase ISU63_19910 PF01695 IstB-like ATP binding protein ISU63_19915 PF00665 Integrase core domain ISU63_19915 PF02796 Helix-turn-helix domain of resolvase ISU63_19925 PF00196 Bacterial regulatory proteins, luxR family ISU63_19925 PF00072 Response regulator receiver domain ISU63_19930 PF00884 Sulfatase ISU63_19930 PF08019 Phosphoethanolamine transferase EptA/EptB ISU63_19935 PF12146 Serine aminopeptidase, S33 ISU63_19940 PF00324 Amino acid permease ISU63_19945 PF00221 Aromatic amino acid lyase ISU63_19950 PF17392 Urocanase C-terminal domain ISU63_19950 PF17391 Urocanase N-terminal domain ISU63_19950 PF01175 Urocanase Rossmann-like domain ISU63_19955 PF00291 Pyridoxal-phosphate dependent enzyme ISU63_19960 PF00156 Phosphoribosyl transferase domain ISU63_19975 PF01497 Periplasmic binding protein ISU63_19980 PF01032 FecCD transport family ISU63_19985 PF01032 FecCD transport family ISU63_19990 PF00005 ABC transporter ISU63_20025 PF04606 Ogr/Delta-like zinc finger ISU63_20035 PF13356 Arm DNA-binding domain ISU63_20035 PF00589 Phage integrase family ISU63_20035 PF14659 Phage integrase, N-terminal SAM-like domain ISU63_20045 PF12833 Helix-turn-helix domain ISU63_20050 PF02653 Branched-chain amino acid transport system / permease component ISU63_20055 PF00005 ABC transporter ISU63_20060 PF13407 Periplasmic binding protein domain ISU63_20070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU63_20070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU63_20080 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU63_20080 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU63_20090 PF00419 Fimbrial protein ISU63_20095 PF01757 Acyltransferase family ISU63_20120 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU63_20130 PF05638 Type VI secretion system effector, Hcp ISU63_20140 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU63_20145 PF02264 LamB porin ISU63_20150 PF17912 MalK OB fold domain ISU63_20150 PF00005 ABC transporter ISU63_20160 PF01547 Bacterial extracellular solute-binding protein ISU63_20165 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_20165 PF14785 Maltose transport system permease protein MalF P2 domain ISU63_20170 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_20175 PF06146 Phosphate-starvation-inducible E ISU63_20180 PF00342 Phosphoglucose isomerase ISU63_20185 PF00696 Amino acid kinase family ISU63_20185 PF01842 ACT domain ISU63_20190 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU63_20190 PF08479 POTRA domain, ShlB-type ISU63_20190 PF17287 POTRA domain ISU63_20195 PF05860 haemagglutination activity domain ISU63_20195 PF13332 Hemagglutinin repeat ISU63_20200 PF02574 Homocysteine S-methyltransferase ISU63_20200 PF00809 Pterin binding enzyme ISU63_20200 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISU63_20200 PF02607 B12 binding domain ISU63_20200 PF02310 B12 binding domain ISU63_20210 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU63_20215 PF00463 Isocitrate lyase family ISU63_20220 PF01274 Malate synthase ISU63_20225 PF04204 Homoserine O-succinyltransferase ISU63_20260 PF00392 Bacterial regulatory proteins, gntR family ISU63_20260 PF07729 FCD domain ISU63_20265 PF07690 Major Facilitator Superfamily ISU63_20280 PF00294 pfkB family carbohydrate kinase ISU63_20285 PF05025 RbsD / FucU transport protein family ISU63_20290 PF02705 K+ potassium transporter ISU63_20295 PF17868 AAA lid domain ISU63_20295 PF12592 Protein of unknown function (DUF3763) ISU63_20295 PF07728 AAA domain (dynein-related subfamily) ISU63_20300 PF05762 VWA domain containing CoxE-like protein ISU63_20305 PF03590 Aspartate-ammonia ligase ISU63_20310 PF01037 Lrp/AsnC ligand binding domain ISU63_20315 PF00258 Flavodoxin ISU63_20320 PF13932 GidA associated domain ISU63_20320 PF01134 Glucose inhibited division protein A ISU63_20325 PF02527 rRNA small subunit methyltransferase G ISU63_20330 PF03899 ATP synthase I chain ISU63_20335 PF00119 ATP synthase A chain ISU63_20340 PF00137 ATP synthase subunit C ISU63_20345 PF00430 ATP synthase B/B' CF(0) ISU63_20350 PF00213 ATP synthase delta (OSCP) subunit ISU63_20355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU63_20355 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU63_20355 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU63_20360 PF00231 ATP synthase ISU63_20365 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU63_20365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU63_20370 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU63_20370 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU63_20375 PF12804 MobA-like NTP transferase domain ISU63_20375 PF00132 Bacterial transferase hexapeptide (six repeats) ISU63_20380 PF01380 SIS domain ISU63_20385 PF12849 PBP superfamily domain ISU63_20390 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_20395 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_20400 PF00005 ABC transporter ISU63_20405 PF01895 PhoU domain ISU63_20415 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU63_20420 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_20425 PF00528 Binding-protein-dependent transport system inner membrane component ISU63_20430 PF13419 Haloacid dehalogenase-like hydrolase ISU63_20440 PF00860 Permease family ISU63_20460 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU63_20460 PF07055 Enoyl reductase FAD binding domain ISU63_20460 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU63_20465 PF01926 50S ribosome-binding GTPase ISU63_20465 PF12631 MnmE helical domain ISU63_20465 PF10396 GTP-binding protein TrmE N-terminus ISU63_20470 PF02096 60Kd inner membrane protein ISU63_20470 PF14849 YidC periplasmic domain ISU63_20475 PF01809 Putative membrane protein insertion efficiency factor ISU63_20480 PF00825 Ribonuclease P ISU63_20485 PF00468 Ribosomal protein L34