locus-tag class description ISU57_00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU57_00005 PF11638 DnaA N-terminal domain ISU57_00005 PF00308 Bacterial dnaA protein ISU57_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU57_00010 PF02767 DNA polymerase III beta subunit, central domain ISU57_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU57_00020 PF02463 RecF/RecN/SMC N terminal domain ISU57_00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU57_00025 PF18053 DNA gyrase B subunit insert domain ISU57_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_00025 PF00204 DNA gyrase B ISU57_00025 PF01751 Toprim domain ISU57_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU57_00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_00045 PF13291 ACT domain ISU57_00055 PF07119 Protein of unknown function (DUF1375) ISU57_00060 PF00011 Hsp20/alpha crystallin family ISU57_00065 PF00011 Hsp20/alpha crystallin family ISU57_00070 PF02080 TrkA-C domain ISU57_00070 PF06826 Predicted Permease Membrane Region ISU57_00075 PF00155 Aminotransferase class I and II ISU57_00085 PF00128 Alpha amylase, catalytic domain ISU57_00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU57_00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU57_00100 PF00691 OmpA family ISU57_00100 PF13488 Glycine zipper ISU57_00110 PF03352 Methyladenine glycosylase ISU57_00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU57_00120 PF05746 DALR anticodon binding domain ISU57_00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU57_00130 PF11254 Protein of unknown function (DUF3053) ISU57_00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU57_00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU57_00135 PF02378 Phosphotransferase system, EIIC ISU57_00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU57_00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU57_00145 PF05068 Mannitol repressor ISU57_00150 PF10928 Protein of unknown function (DUF2810) ISU57_00165 PF00672 HAMP domain ISU57_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU57_00165 PF02203 Tar ligand binding domain homologue ISU57_00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU57_00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU57_00175 PF02634 FdhD/NarQ family ISU57_00185 PF09163 Formate dehydrogenase N, transmembrane ISU57_00185 PF13247 4Fe-4S dicluster domain ISU57_00190 PF01292 Prokaryotic cytochrome b561 ISU57_00195 PF04216 Protein involved in formate dehydrogenase formation ISU57_00200 PF03841 L-seryl-tRNA selenium transferase ISU57_00200 PF12390 Selenocysteine synthase N terminal ISU57_00205 PF03144 Elongation factor Tu domain 2 ISU57_00205 PF00009 Elongation factor Tu GTP binding domain ISU57_00205 PF09107 Elongation factor SelB, winged helix ISU57_00205 PF09106 Elongation factor SelB, winged helix ISU57_00235 PF07690 Major Facilitator Superfamily ISU57_00250 PF01757 Acyltransferase family ISU57_00255 PF00419 Fimbrial protein ISU57_00275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_00275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_00285 PF13407 Periplasmic binding protein domain ISU57_00290 PF00005 ABC transporter ISU57_00295 PF02653 Branched-chain amino acid transport system / permease component ISU57_00300 PF12833 Helix-turn-helix domain ISU57_00310 PF00589 Phage integrase family ISU57_00310 PF14659 Phage integrase, N-terminal SAM-like domain ISU57_00310 PF13356 Arm DNA-binding domain ISU57_00320 PF04606 Ogr/Delta-like zinc finger ISU57_00355 PF00005 ABC transporter ISU57_00360 PF01032 FecCD transport family ISU57_00365 PF01032 FecCD transport family ISU57_00370 PF01497 Periplasmic binding protein ISU57_00385 PF00156 Phosphoribosyl transferase domain ISU57_00390 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_00395 PF01175 Urocanase Rossmann-like domain ISU57_00395 PF17391 Urocanase N-terminal domain ISU57_00395 PF17392 Urocanase C-terminal domain ISU57_00400 PF00221 Aromatic amino acid lyase ISU57_00405 PF00324 Amino acid permease ISU57_00410 PF12146 Serine aminopeptidase, S33 ISU57_00415 PF00884 Sulfatase ISU57_00415 PF08019 Phosphoethanolamine transferase EptA/EptB ISU57_00420 PF00196 Bacterial regulatory proteins, luxR family ISU57_00420 PF00072 Response regulator receiver domain ISU57_00430 PF00665 Integrase core domain ISU57_00430 PF02796 Helix-turn-helix domain of resolvase ISU57_00435 PF01695 IstB-like ATP binding protein ISU57_00440 PF00132 Bacterial transferase hexapeptide (six repeats) ISU57_00445 PF01488 Shikimate / quinate 5-dehydrogenase ISU57_00445 PF08501 Shikimate dehydrogenase substrate binding domain ISU57_00445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU57_00450 PF01300 Telomere recombination ISU57_00455 PF01396 Topoisomerase DNA binding C4 zinc finger ISU57_00460 PF04361 Protein of unknown function (DUF494) ISU57_00465 PF02481 DNA recombination-mediator protein A ISU57_00465 PF17782 DprA winged helix domain ISU57_00470 PF01327 Polypeptide deformylase ISU57_00475 PF02911 Formyl transferase, C-terminal domain ISU57_00475 PF00551 Formyl transferase ISU57_00480 PF01189 16S rRNA methyltransferase RsmB/F ISU57_00480 PF01029 NusB family ISU57_00485 PF02254 TrkA-N domain ISU57_00485 PF02080 TrkA-C domain ISU57_00490 PF01741 Large-conductance mechanosensitive channel, MscL ISU57_00495 PF03889 Alternative ribosome-rescue factor A ISU57_00500 PF13411 MerR HTH family regulatory protein ISU57_00505 PF01196 Ribosomal protein L17 ISU57_00510 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU57_00510 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU57_00510 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU57_00515 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU57_00515 PF01479 S4 domain ISU57_00520 PF00411 Ribosomal protein S11 ISU57_00525 PF00416 Ribosomal protein S13/S18 ISU57_00530 PF00444 Ribosomal protein L36 ISU57_00535 PF00344 SecY translocase ISU57_00540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU57_00545 PF00327 Ribosomal protein L30p/L7e ISU57_00550 PF03719 Ribosomal protein S5, C-terminal domain ISU57_00550 PF00333 Ribosomal protein S5, N-terminal domain ISU57_00555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU57_00560 PF00347 Ribosomal protein L6 ISU57_00565 PF00410 Ribosomal protein S8 ISU57_00570 PF00253 Ribosomal protein S14p/S29e ISU57_00575 PF00281 Ribosomal protein L5 ISU57_00575 PF00673 ribosomal L5P family C-terminus ISU57_00580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU57_00580 PF00467 KOW motif ISU57_00585 PF00238 Ribosomal protein L14p/L23e ISU57_00590 PF00366 Ribosomal protein S17 ISU57_00595 PF00831 Ribosomal L29 protein ISU57_00600 PF00252 Ribosomal protein L16p/L10e ISU57_00605 PF00189 Ribosomal protein S3, C-terminal domain ISU57_00605 PF07650 KH domain ISU57_00610 PF00237 Ribosomal protein L22p/L17e ISU57_00615 PF00203 Ribosomal protein S19 ISU57_00620 PF00181 Ribosomal Proteins L2, RNA binding domain ISU57_00620 PF03947 Ribosomal Proteins L2, C-terminal domain ISU57_00625 PF00276 Ribosomal protein L23 ISU57_00630 PF00573 Ribosomal protein L4/L1 family ISU57_00635 PF00297 Ribosomal protein L3 ISU57_00640 PF00338 Ribosomal protein S10p/S20e ISU57_00645 PF00210 Ferritin-like domain ISU57_00650 PF04324 BFD-like [2Fe-2S] binding domain ISU57_00655 PF01797 Transposase IS200 like ISU57_00660 PF00009 Elongation factor Tu GTP binding domain ISU57_00660 PF03144 Elongation factor Tu domain 2 ISU57_00660 PF03143 Elongation factor Tu C-terminal domain ISU57_00665 PF00679 Elongation factor G C-terminus ISU57_00665 PF14492 Elongation Factor G, domain II ISU57_00665 PF00009 Elongation factor Tu GTP binding domain ISU57_00665 PF03764 Elongation factor G, domain IV ISU57_00665 PF03144 Elongation factor Tu domain 2 ISU57_00670 PF00177 Ribosomal protein S7p/S5e ISU57_00675 PF00164 Ribosomal protein S12/S23 ISU57_00680 PF04077 DsrH like protein ISU57_00685 PF02635 DsrE/DsrF-like family ISU57_00690 PF02635 DsrE/DsrF-like family ISU57_00695 PF08348 YheO-like PAS domain ISU57_00695 PF13309 HTH domain ISU57_00700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU57_00700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU57_00705 PF04102 SlyX ISU57_00710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU57_00715 PF09526 Probable metal-binding protein (DUF2387) ISU57_00720 PF02254 TrkA-N domain ISU57_00720 PF00999 Sodium/hydrogen exchanger family ISU57_00725 PF02525 Flavodoxin-like fold ISU57_00735 PF00535 Glycosyl transferase family 2 ISU57_00745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU57_00750 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_00755 PF00005 ABC transporter ISU57_00760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU57_00765 PF01810 LysE type translocator ISU57_00770 PF00561 alpha/beta hydrolase fold ISU57_00775 PF06794 Uncharacterised protein family (UPF0270) ISU57_00780 PF00485 Phosphoribulokinase / Uridine kinase family ISU57_00790 PF02566 OsmC-like protein ISU57_00795 PF13545 Crp-like helix-turn-helix domain ISU57_00795 PF00027 Cyclic nucleotide-binding domain ISU57_00800 PF12805 FUSC-like inner membrane protein yccS ISU57_00805 PF00202 Aminotransferase class-III ISU57_00810 PF00117 Glutamine amidotransferase class-I ISU57_00815 PF05872 Bacterial protein of unknown function (DUF853) ISU57_00820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU57_00825 PF02056 Family 4 glycosyl hydrolase ISU57_00825 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU57_00830 PF00356 Bacterial regulatory proteins, lacI family ISU57_00840 PF07690 Major Facilitator Superfamily ISU57_00845 PF07969 Amidohydrolase family ISU57_00850 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU57_00850 PF04324 BFD-like [2Fe-2S] binding domain ISU57_00850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU57_00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_00850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU57_00855 PF13806 Rieske-like [2Fe-2S] domain ISU57_00860 PF01226 Formate/nitrite transporter ISU57_00865 PF14824 Sirohaem biosynthesis protein central ISU57_00865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU57_00865 PF10414 Sirohaem synthase dimerisation region ISU57_00870 PF00579 tRNA synthetases class I (W and Y) ISU57_00875 PF13419 Haloacid dehalogenase-like hydrolase ISU57_00880 PF00834 Ribulose-phosphate 3 epimerase family ISU57_00885 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU57_00890 PF05036 Sporulation related domain ISU57_00895 PF01761 3-dehydroquinate synthase ISU57_00900 PF01202 Shikimate kinase ISU57_00905 PF00263 Bacterial type II and III secretion system protein ISU57_00905 PF03958 Bacterial type II/III secretion system short domain ISU57_00930 PF00905 Penicillin binding protein transpeptidase domain ISU57_00930 PF00912 Transglycosylase ISU57_00930 PF17092 Penicillin-binding protein OB-like domain ISU57_00935 PF00293 NUDIX domain ISU57_00940 PF07095 Intracellular growth attenuator protein IgaA ISU57_00945 PF13419 Haloacid dehalogenase-like hydrolase ISU57_00950 PF01479 S4 domain ISU57_00955 PF01430 Hsp33 protein ISU57_00960 PF01293 Phosphoenolpyruvate carboxykinase ISU57_00965 PF00672 HAMP domain ISU57_00965 PF00512 His Kinase A (phospho-acceptor) domain ISU57_00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_00970 PF00072 Response regulator receiver domain ISU57_00970 PF00486 Transcriptional regulatory protein, C terminal ISU57_00975 PF03449 Transcription elongation factor, N-terminal ISU57_00975 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU57_00980 PF17674 HHH domain ISU57_00980 PF00575 S1 RNA binding domain ISU57_00980 PF09371 Tex-like protein N-terminal domain ISU57_00980 PF16921 Tex protein YqgF-like domain ISU57_00985 PF04023 FeoA domain ISU57_00990 PF07664 Ferrous iron transport protein B C terminus ISU57_00990 PF17910 FeoB cytosolic helical domain ISU57_00990 PF02421 Ferrous iron transport protein B ISU57_00990 PF07670 Nucleoside recognition ISU57_00995 PF09012 FeoC like transcriptional regulator ISU57_01000 PF07338 Protein of unknown function (DUF1471) ISU57_01005 PF00561 alpha/beta hydrolase fold ISU57_01010 PF00156 Phosphoribosyl transferase domain ISU57_01015 PF01521 Iron-sulphur cluster biosynthesis ISU57_01015 PF01106 NifU-like domain ISU57_01020 PF02446 4-alpha-glucanotransferase ISU57_01025 PF00343 Carbohydrate phosphorylase ISU57_01030 PF00343 Carbohydrate phosphorylase ISU57_01035 PF17874 MalT-like TPR region ISU57_01035 PF00196 Bacterial regulatory proteins, luxR family ISU57_01040 PF00581 Rhodanese-like domain ISU57_01045 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU57_01045 PF01694 Rhomboid family ISU57_01050 PF00455 DeoR C terminal sensor domain ISU57_01050 PF08220 DeoR-like helix-turn-helix domain ISU57_01075 PF01266 FAD dependent oxidoreductase ISU57_01075 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU57_01080 PF00343 Carbohydrate phosphorylase ISU57_01085 PF00534 Glycosyl transferases group 1 ISU57_01085 PF08323 Starch synthase catalytic domain ISU57_01090 PF00483 Nucleotidyl transferase ISU57_01095 PF00128 Alpha amylase, catalytic domain ISU57_01095 PF18390 Glycogen debranching enzyme C-terminal domain ISU57_01095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU57_01100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU57_01100 PF00128 Alpha amylase, catalytic domain ISU57_01100 PF02806 Alpha amylase, C-terminal all-beta domain ISU57_01105 PF06580 Histidine kinase ISU57_01105 PF07694 5TMR of 5TMR-LYT ISU57_01110 PF07979 Intimin C-type lectin domain ISU57_01110 PF09134 Invasin, domain 3 ISU57_01110 PF11924 Inverse autotransporter, beta-domain ISU57_01110 PF02369 Bacterial Ig-like domain (group 1) ISU57_01140 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU57_01140 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU57_01145 PF01914 MarC family integral membrane protein ISU57_01165 PF01202 Shikimate kinase ISU57_01170 PF02447 GntP family permease ISU57_01175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU57_01175 PF00356 Bacterial regulatory proteins, lacI family ISU57_01180 PF02678 Pirin ISU57_01180 PF17954 Quercetinase C-terminal cupin domain ISU57_01190 PF00486 Transcriptional regulatory protein, C terminal ISU57_01190 PF00072 Response regulator receiver domain ISU57_01200 PF01116 Fructose-bisphosphate aldolase class-II ISU57_01210 PF13407 Periplasmic binding protein domain ISU57_01215 PF02653 Branched-chain amino acid transport system / permease component ISU57_01220 PF00005 ABC transporter ISU57_01225 PF08448 PAS fold ISU57_01225 PF00072 Response regulator receiver domain ISU57_01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_01225 PF00512 His Kinase A (phospho-acceptor) domain ISU57_01225 PF13188 PAS domain ISU57_01235 PF01384 Phosphate transporter family ISU57_01240 PF01797 Transposase IS200 like ISU57_01245 PF10625 Universal stress protein B (UspB) ISU57_01250 PF00582 Universal stress protein family ISU57_01255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU57_01255 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU57_01260 PF08548 Peptidase M10 serralysin C terminal ISU57_01260 PF00413 Matrixin ISU57_01260 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU57_01265 PF04445 Putative SAM-dependent methyltransferase ISU57_01270 PF01432 Peptidase family M3 ISU57_01275 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU57_01280 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_01280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU57_01285 PF05651 Putative sugar diacid recognition ISU57_01285 PF17853 GGDEF-like domain ISU57_01285 PF13556 PucR C-terminal helix-turn-helix domain ISU57_01295 PF02447 GntP family permease ISU57_01300 PF02595 Glycerate kinase family ISU57_01325 PF03631 Virulence factor BrkB ISU57_01330 PF02611 CDP-diacylglycerol pyrophosphatase ISU57_01335 PF05170 AsmA family ISU57_01340 PF00563 EAL domain ISU57_01345 PF01361 Tautomerase enzyme ISU57_01350 PF00294 pfkB family carbohydrate kinase ISU57_01355 PF00675 Insulinase (Peptidase family M16) ISU57_01355 PF05193 Peptidase M16 inactive domain ISU57_01360 PF00375 Sodium:dicarboxylate symporter family ISU57_01370 PF06917 Periplasmic pectate lyase ISU57_01375 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU57_01380 PF00563 EAL domain ISU57_01380 PF00990 Diguanylate cyclase, GGDEF domain ISU57_01380 PF00672 HAMP domain ISU57_01380 PF17154 Gammaproteobacterial periplasmic sensor domain ISU57_01385 PF01270 Glycosyl hydrolases family 8 ISU57_01395 PF00005 ABC transporter ISU57_01395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_01400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_01400 PF00005 ABC transporter ISU57_01405 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_01405 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU57_01410 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_01415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_01420 PF17287 POTRA domain ISU57_01420 PF08479 POTRA domain, ShlB-type ISU57_01420 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU57_01425 PF05594 Haemagluttinin repeat ISU57_01425 PF13332 Hemagglutinin repeat ISU57_01425 PF04829 Pre-toxin domain with VENN motif ISU57_01425 PF05860 haemagglutination activity domain ISU57_01435 PF07690 Major Facilitator Superfamily ISU57_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_01440 PF07730 Histidine kinase ISU57_01440 PF05231 MASE1 ISU57_01445 PF01695 IstB-like ATP binding protein ISU57_01450 PF00665 Integrase core domain ISU57_01450 PF02796 Helix-turn-helix domain of resolvase ISU57_01485 PF04204 Homoserine O-succinyltransferase ISU57_01490 PF01274 Malate synthase ISU57_01495 PF00463 Isocitrate lyase family ISU57_01500 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU57_01510 PF02574 Homocysteine S-methyltransferase ISU57_01510 PF00809 Pterin binding enzyme ISU57_01510 PF02310 B12 binding domain ISU57_01510 PF02607 B12 binding domain ISU57_01510 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISU57_01515 PF13332 Hemagglutinin repeat ISU57_01515 PF05860 haemagglutination activity domain ISU57_01525 PF00696 Amino acid kinase family ISU57_01525 PF01842 ACT domain ISU57_01530 PF00342 Phosphoglucose isomerase ISU57_01535 PF06146 Phosphate-starvation-inducible E ISU57_01540 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_01545 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_01545 PF14785 Maltose transport system permease protein MalF P2 domain ISU57_01550 PF01547 Bacterial extracellular solute-binding protein ISU57_01560 PF17912 MalK OB fold domain ISU57_01560 PF00005 ABC transporter ISU57_01565 PF02264 LamB porin ISU57_01570 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU57_01580 PF05638 Type VI secretion system effector, Hcp ISU57_01590 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU57_01610 PF01695 IstB-like ATP binding protein ISU57_01615 PF00665 Integrase core domain ISU57_01615 PF02796 Helix-turn-helix domain of resolvase ISU57_01625 PF00691 OmpA family ISU57_01630 PF00990 Diguanylate cyclase, GGDEF domain ISU57_01630 PF17152 Periplasmic sensor domain ISU57_01640 PF00690 Cation transporter/ATPase, N-terminus ISU57_01640 PF00689 Cation transporting ATPase, C-terminus ISU57_01645 PF01464 Transglycosylase SLT domain ISU57_01645 PF14718 Soluble lytic murein transglycosylase L domain ISU57_01650 PF01371 Trp repressor protein ISU57_01655 PF01931 Protein of unknown function DUF84 ISU57_01660 PF00300 Histidine phosphatase superfamily (branch 1) ISU57_01665 PF12833 Helix-turn-helix domain ISU57_01665 PF06445 GyrI-like small molecule binding domain ISU57_01670 PF05981 CreA protein ISU57_01675 PF00072 Response regulator receiver domain ISU57_01675 PF00486 Transcriptional regulatory protein, C terminal ISU57_01680 PF08254 Threonine leader peptide ISU57_01685 PF00696 Amino acid kinase family ISU57_01685 PF01842 ACT domain ISU57_01685 PF13840 ACT domain ISU57_01685 PF03447 Homoserine dehydrogenase, NAD binding domain ISU57_01685 PF00742 Homoserine dehydrogenase ISU57_01690 PF08544 GHMP kinases C terminal ISU57_01690 PF00288 GHMP kinases N terminal domain ISU57_01695 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_01695 PF14821 Threonine synthase N terminus ISU57_01700 PF03883 Peroxide stress protein YaaA ISU57_01710 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU57_01715 PF00994 Probable molybdopterin binding domain ISU57_01720 PF07690 Major Facilitator Superfamily ISU57_01730 PF01184 GPR1/FUN34/yaaH family ISU57_01735 PF00012 Hsp70 protein ISU57_01740 PF01556 DnaJ C terminal domain ISU57_01740 PF00684 DnaJ central domain ISU57_01740 PF00226 DnaJ domain ISU57_01745 PF06965 Na+/H+ antiporter 1 ISU57_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_01750 PF03466 LysR substrate binding domain ISU57_01755 PF01649 Ribosomal protein S20 ISU57_01760 PF01687 Riboflavin kinase ISU57_01760 PF06574 FAD synthetase ISU57_01765 PF06827 Zinc finger found in FPG and IleRS ISU57_01765 PF00133 tRNA synthetases class I (I, L, M and V) ISU57_01765 PF08264 Anticodon-binding domain of tRNA ISU57_01770 PF01252 Signal peptidase (SPase) II ISU57_01775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU57_01780 PF02401 LytB protein ISU57_01785 PF01797 Transposase IS200 like ISU57_01790 PF05173 Dihydrodipicolinate reductase, C-terminus ISU57_01790 PF01113 Dihydrodipicolinate reductase, N-terminus ISU57_01795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU57_01795 PF00117 Glutamine amidotransferase class-I ISU57_01800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU57_01800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU57_01800 PF02142 MGS-like domain ISU57_01805 PF01810 LysE type translocator ISU57_01810 PF06738 Putative threonine/serine exporter ISU57_01815 PF12821 Threonine/Serine exporter, ThrE ISU57_01820 PF00186 Dihydrofolate reductase ISU57_01825 PF01797 Transposase IS200 like ISU57_01840 PF00149 Calcineurin-like phosphoesterase ISU57_01845 PF04379 ApaG domain ISU57_01850 PF00398 Ribosomal RNA adenine dimethylase ISU57_01855 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU57_01860 PF09312 SurA N-terminal domain ISU57_01860 PF00639 PPIC-type PPIASE domain ISU57_01865 PF03968 OstA-like protein ISU57_01865 PF04453 LPS transport system D ISU57_01870 PF05099 Tellurite resistance protein TerB ISU57_01870 PF00226 DnaJ domain ISU57_01875 PF00849 RNA pseudouridylate synthase ISU57_01890 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU57_01895 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU57_01910 PF05947 Type VI secretion system, TssF ISU57_01920 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_01920 PF07724 AAA domain (Cdc48 subfamily) ISU57_01920 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_01920 PF17871 AAA lid domain ISU57_01925 PF04717 Type VI secretion system, phage-baseplate injector ISU57_01925 PF06715 Gp5 C-terminal repeat (3 copies) ISU57_01955 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU57_01960 PF05736 OprF membrane domain ISU57_01960 PF00691 OmpA family ISU57_01975 PF00176 SNF2 family N-terminal domain ISU57_01975 PF12137 RNA polymerase recycling family C-terminal ISU57_01975 PF00271 Helicase conserved C-terminal domain ISU57_01975 PF18337 RapA N-terminal Tudor like domain ISU57_01975 PF18339 RapA N-terminal Tudor like domain 1 ISU57_01980 PF00136 DNA polymerase family B ISU57_01980 PF03104 DNA polymerase family B, exonuclease domain ISU57_01985 PF09335 SNARE associated Golgi protein ISU57_01990 PF00005 ABC transporter ISU57_01995 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_02005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_02005 PF12793 Sugar transport-related sRNA regulator N-term ISU57_02010 PF07690 Major Facilitator Superfamily ISU57_02015 PF00694 Aconitase C-terminal domain ISU57_02020 PF00330 Aconitase family (aconitate hydratase) ISU57_02025 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU57_02030 PF00682 HMGL-like ISU57_02030 PF08502 LeuA allosteric (dimerisation) domain ISU57_02035 PF01797 Transposase IS200 like ISU57_02045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_02045 PF03466 LysR substrate binding domain ISU57_02050 PF00501 AMP-binding enzyme ISU57_02055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU57_02055 PF00205 Thiamine pyrophosphate enzyme, central domain ISU57_02055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU57_02060 PF10369 Small subunit of acetolactate synthase ISU57_02065 PF01797 Transposase IS200 like ISU57_02070 PF00356 Bacterial regulatory proteins, lacI family ISU57_02070 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU57_02075 PF06610 L-alanine exporter ISU57_02085 PF02381 MraZ protein, putative antitoxin-like ISU57_02090 PF01795 MraW methylase family ISU57_02095 PF04999 Cell division protein FtsL ISU57_02100 PF03717 Penicillin-binding Protein dimerisation domain ISU57_02100 PF00905 Penicillin binding protein transpeptidase domain ISU57_02105 PF01225 Mur ligase family, catalytic domain ISU57_02105 PF08245 Mur ligase middle domain ISU57_02105 PF02875 Mur ligase family, glutamate ligase domain ISU57_02110 PF02875 Mur ligase family, glutamate ligase domain ISU57_02110 PF08245 Mur ligase middle domain ISU57_02110 PF01225 Mur ligase family, catalytic domain ISU57_02115 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU57_02115 PF00953 Glycosyl transferase family 4 ISU57_02120 PF02875 Mur ligase family, glutamate ligase domain ISU57_02120 PF08245 Mur ligase middle domain ISU57_02125 PF01098 Cell cycle protein ISU57_02130 PF03033 Glycosyltransferase family 28 N-terminal domain ISU57_02130 PF04101 Glycosyltransferase family 28 C-terminal domain ISU57_02135 PF01225 Mur ligase family, catalytic domain ISU57_02135 PF02875 Mur ligase family, glutamate ligase domain ISU57_02135 PF08245 Mur ligase middle domain ISU57_02140 PF07478 D-ala D-ala ligase C-terminus ISU57_02140 PF01820 D-ala D-ala ligase N-terminus ISU57_02145 PF08478 POTRA domain, FtsQ-type ISU57_02145 PF03799 Cell division protein FtsQ ISU57_02150 PF02491 SHS2 domain inserted in FTSA ISU57_02155 PF12327 FtsZ family, C-terminal domain ISU57_02155 PF00091 Tubulin/FtsZ family, GTPase domain ISU57_02160 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU57_02170 PF06558 Secretion monitor precursor protein (SecM) ISU57_02175 PF02810 SEC-C motif ISU57_02175 PF07517 SecA DEAD-like domain ISU57_02175 PF01043 SecA preprotein cross-linking domain ISU57_02175 PF07516 SecA Wing and Scaffold domain ISU57_02185 PF00293 NUDIX domain ISU57_02190 PF01695 IstB-like ATP binding protein ISU57_02195 PF02796 Helix-turn-helix domain of resolvase ISU57_02195 PF00665 Integrase core domain ISU57_02205 PF07681 DoxX ISU57_02215 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU57_02220 PF05957 Bacterial protein of unknown function (DUF883) ISU57_02230 PF13721 SecD export protein N-terminal TM region ISU57_02235 PF09335 SNARE associated Golgi protein ISU57_02245 PF00392 Bacterial regulatory proteins, gntR family ISU57_02245 PF07729 FCD domain ISU57_02250 PF07690 Major Facilitator Superfamily ISU57_02255 PF02614 Glucuronate isomerase ISU57_02260 PF08125 Mannitol dehydrogenase C-terminal domain ISU57_02260 PF01232 Mannitol dehydrogenase Rossmann domain ISU57_02265 PF08666 SAF domain ISU57_02265 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU57_02270 PF10688 Bacterial inner membrane protein ISU57_02275 PF01797 Transposase IS200 like ISU57_02280 PF00375 Sodium:dicarboxylate symporter family ISU57_02285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU57_02290 PF01863 Protein of unknown function DUF45 ISU57_02300 PF05175 Methyltransferase small domain ISU57_02305 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_02305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU57_02310 PF03729 Short repeat of unknown function (DUF308) ISU57_02325 PF00092 von Willebrand factor type A domain ISU57_02335 PF02342 TerD domain ISU57_02340 PF00092 von Willebrand factor type A domain ISU57_02345 PF08479 POTRA domain, ShlB-type ISU57_02345 PF17287 POTRA domain ISU57_02345 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU57_02350 PF05860 haemagglutination activity domain ISU57_02350 PF13332 Hemagglutinin repeat ISU57_02350 PF13018 Extended Signal Peptide of Type V secretion system ISU57_02350 PF04829 Pre-toxin domain with VENN motif ISU57_02360 PF04829 Pre-toxin domain with VENN motif ISU57_02360 PF13332 Hemagglutinin repeat ISU57_02365 PF04829 Pre-toxin domain with VENN motif ISU57_02365 PF13332 Hemagglutinin repeat ISU57_02380 PF04829 Pre-toxin domain with VENN motif ISU57_02380 PF05860 haemagglutination activity domain ISU57_02380 PF13332 Hemagglutinin repeat ISU57_02380 PF13018 Extended Signal Peptide of Type V secretion system ISU57_02385 PF05860 haemagglutination activity domain ISU57_02385 PF04829 Pre-toxin domain with VENN motif ISU57_02385 PF13332 Hemagglutinin repeat ISU57_02385 PF13018 Extended Signal Peptide of Type V secretion system ISU57_02405 PF00005 ABC transporter ISU57_02405 PF17912 MalK OB fold domain ISU57_02405 PF03459 TOBE domain ISU57_02410 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU57_02415 PF00356 Bacterial regulatory proteins, lacI family ISU57_02420 PF01547 Bacterial extracellular solute-binding protein ISU57_02425 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_02430 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_02440 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU57_02440 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU57_02440 PF14310 Fibronectin type III-like domain ISU57_02450 PF04632 Fusaric acid resistance protein family ISU57_02455 PF00529 HlyD membrane-fusion protein of T1SS ISU57_02455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_02470 PF00155 Aminotransferase class I and II ISU57_02490 PF01042 Endoribonuclease L-PSP ISU57_02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_02510 PF03466 LysR substrate binding domain ISU57_02555 PF04539 Sigma-70 region 3 ISU57_02555 PF04542 Sigma-70 region 2 ISU57_02555 PF00140 Sigma-70 factor, region 1.2 ISU57_02555 PF03979 Sigma-70 factor, region 1.1 ISU57_02555 PF04546 Sigma-70, non-essential region ISU57_02555 PF04545 Sigma-70, region 4 ISU57_02560 PF01807 CHC2 zinc finger ISU57_02560 PF10410 DnaB-helicase binding domain of primase ISU57_02560 PF08278 DNA primase DnaG DnaB-binding ISU57_02560 PF08275 DNA primase catalytic core, N-terminal domain ISU57_02565 PF01165 Ribosomal protein S21 ISU57_02570 PF00814 Glycoprotease family ISU57_02575 PF02660 Glycerol-3-phosphate acyltransferase ISU57_02580 PF02152 Dihydroneopterin aldolase ISU57_02585 PF02673 Bacitracin resistance protein BacA ISU57_02590 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU57_02590 PF01966 HD domain ISU57_02590 PF01743 Poly A polymerase head domain ISU57_02595 PF08239 Bacterial SH3 domain ISU57_02600 PF01928 CYTH domain ISU57_02605 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU57_02605 PF08335 GlnD PII-uridylyltransferase ISU57_02610 PF01467 Cytidylyltransferase-like ISU57_02610 PF00294 pfkB family carbohydrate kinase ISU57_02615 PF13520 Amino acid permease ISU57_02625 PF04380 Membrane fusogenic activity ISU57_02630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU57_02635 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU57_02640 PF03738 Glutathionylspermidine synthase preATP-grasp ISU57_02645 PF06693 Protein of unknown function (DUF1190) ISU57_02650 PF02321 Outer membrane efflux protein ISU57_02655 PF00293 NUDIX domain ISU57_02660 PF06853 Protein of unknown function (DUF1249) ISU57_02665 PF00149 Calcineurin-like phosphoesterase ISU57_02670 PF05728 Uncharacterised protein family (UPF0227) ISU57_02675 PF01751 Toprim domain ISU57_02675 PF00986 DNA gyrase B subunit, carboxyl terminus ISU57_02675 PF00204 DNA gyrase B ISU57_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_02680 PF03466 LysR substrate binding domain ISU57_02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_02685 PF02525 Flavodoxin-like fold ISU57_02695 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU57_02695 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU57_02700 PF01553 Acyltransferase ISU57_02705 PF07732 Multicopper oxidase ISU57_02705 PF07731 Multicopper oxidase ISU57_02715 PF00248 Aldo/keto reductase family ISU57_02725 PF00465 Iron-containing alcohol dehydrogenase ISU57_02730 PF12833 Helix-turn-helix domain ISU57_02730 PF06719 AraC-type transcriptional regulator N-terminus ISU57_02735 PF09335 SNARE associated Golgi protein ISU57_02740 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU57_02745 PF01618 MotA/TolQ/ExbB proton channel family ISU57_02750 PF02472 Biopolymer transport protein ExbD/TolR ISU57_02785 PF00437 Type II/IV secretion system protein ISU57_02800 PF00263 Bacterial type II and III secretion system protein ISU57_02800 PF13629 Pilus formation protein N terminal region ISU57_02800 PF04972 BON domain ISU57_02805 PF13629 Pilus formation protein N terminal region ISU57_02805 PF04972 BON domain ISU57_02805 PF00263 Bacterial type II and III secretion system protein ISU57_02820 PF01797 Transposase IS200 like ISU57_02825 PF00577 Outer membrane usher protein ISU57_02825 PF13954 PapC N-terminal domain ISU57_02825 PF13953 PapC C-terminal domain ISU57_02830 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_02830 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_02835 PF00419 Fimbrial protein ISU57_02835 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU57_02840 PF01497 Periplasmic binding protein ISU57_02860 PF01312 FlhB HrpN YscU SpaS Family ISU57_02865 PF01311 Bacterial export proteins, family 1 ISU57_02870 PF01313 Bacterial export proteins, family 3 ISU57_02875 PF00813 FliP family ISU57_02880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU57_02890 PF00158 Sigma-54 interaction domain ISU57_02890 PF00072 Response regulator receiver domain ISU57_02890 PF02954 Bacterial regulatory protein, Fis family ISU57_02895 PF02049 Flagellar hook-basal body complex protein FliE ISU57_02900 PF01514 Secretory protein of YscJ/FliF family ISU57_02900 PF08345 Flagellar M-ring protein C-terminal ISU57_02915 PF18269 T3SS EscN ATPase C-terminal domain ISU57_02915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU57_02935 PF13144 Chaperone for flagella basal body P-ring formation ISU57_02940 PF00460 Flagella basal body rod protein ISU57_02945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_02945 PF00460 Flagella basal body rod protein ISU57_02950 PF03963 Flagellar hook capping protein - N-terminal region ISU57_02950 PF13861 FlgD Tudor-like domain ISU57_02950 PF13860 FlgD Ig-like domain ISU57_02955 PF00460 Flagella basal body rod protein ISU57_02955 PF07559 Flagellar basal body protein FlaE ISU57_02955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_02960 PF00460 Flagella basal body rod protein ISU57_02960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_02965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_02965 PF00460 Flagella basal body rod protein ISU57_02970 PF02107 Flagellar L-ring protein ISU57_02975 PF02119 Flagellar P-ring protein ISU57_02985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_02985 PF00460 Flagella basal body rod protein ISU57_03005 PF00486 Transcriptional regulatory protein, C terminal ISU57_03005 PF18500 CadC C-terminal domain 1 ISU57_03010 PF00700 Bacterial flagellin C-terminal helical region ISU57_03010 PF00669 Bacterial flagellin N-terminal helical region ISU57_03025 PF00356 Bacterial regulatory proteins, lacI family ISU57_03030 PF00939 Sodium:sulfate symporter transmembrane region ISU57_03045 PF03527 RHS protein ISU57_03045 PF05593 RHS Repeat ISU57_03055 PF04717 Type VI secretion system, phage-baseplate injector ISU57_03060 PF12951 Passenger-associated-transport-repeat ISU57_03070 PF02447 GntP family permease ISU57_03085 PF00005 ABC transporter ISU57_03085 PF00664 ABC transporter transmembrane region ISU57_03090 PF08021 Siderophore-interacting FAD-binding domain ISU57_03090 PF04954 Siderophore-interacting protein ISU57_03090 PF00005 ABC transporter ISU57_03090 PF00664 ABC transporter transmembrane region ISU57_03100 PF00975 Thioesterase domain ISU57_03115 PF08242 Methyltransferase domain ISU57_03115 PF00501 AMP-binding enzyme ISU57_03115 PF00550 Phosphopantetheine attachment site ISU57_03115 PF00668 Condensation domain ISU57_03120 PF00668 Condensation domain ISU57_03120 PF00501 AMP-binding enzyme ISU57_03120 PF13193 AMP-binding enzyme C-terminal domain ISU57_03125 PF00501 AMP-binding enzyme ISU57_03125 PF00550 Phosphopantetheine attachment site ISU57_03125 PF08242 Methyltransferase domain ISU57_03125 PF00668 Condensation domain ISU57_03130 PF01695 IstB-like ATP binding protein ISU57_03135 PF00665 Integrase core domain ISU57_03135 PF02796 Helix-turn-helix domain of resolvase ISU57_03145 PF00593 TonB dependent receptor ISU57_03145 PF07715 TonB-dependent Receptor Plug Domain ISU57_03150 PF01546 Peptidase family M20/M25/M40 ISU57_03150 PF07687 Peptidase dimerisation domain ISU57_03155 PF03806 AbgT putative transporter family ISU57_03160 PF12468 Type III secretion system leucine rich repeat protein ISU57_03160 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU57_03165 PF12468 Type III secretion system leucine rich repeat protein ISU57_03165 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU57_03165 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU57_03165 PF12468 Type III secretion system leucine rich repeat protein ISU57_03175 PF12468 Type III secretion system leucine rich repeat protein ISU57_03175 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU57_03180 PF03797 Autotransporter beta-domain ISU57_03190 PF07906 ShET2 enterotoxin, N-terminal region ISU57_03195 PF00873 AcrB/AcrD/AcrF family ISU57_03200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_03200 PF00529 HlyD membrane-fusion protein of T1SS ISU57_03210 PF08447 PAS fold ISU57_03210 PF08448 PAS fold ISU57_03210 PF00563 EAL domain ISU57_03210 PF00990 Diguanylate cyclase, GGDEF domain ISU57_03225 PF00593 TonB dependent receptor ISU57_03225 PF07715 TonB-dependent Receptor Plug Domain ISU57_03230 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU57_03235 PF04183 IucA / IucC family ISU57_03235 PF06276 Ferric iron reductase FhuF-like transporter ISU57_03270 PF03472 Autoinducer binding domain ISU57_03270 PF00196 Bacterial regulatory proteins, luxR family ISU57_03275 PF00765 Autoinducer synthase ISU57_03280 PF02517 CPBP intramembrane metalloprotease ISU57_03305 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU57_03320 PF00691 OmpA family ISU57_03320 PF05736 OprF membrane domain ISU57_03330 PF07724 AAA domain (Cdc48 subfamily) ISU57_03330 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_03330 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_03330 PF17871 AAA lid domain ISU57_03335 PF13296 Putative type VI secretion system Rhs element Vgr ISU57_03335 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU57_03335 PF04717 Type VI secretion system, phage-baseplate injector ISU57_03395 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU57_03395 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU57_03395 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU57_03400 PF13407 Periplasmic binding protein domain ISU57_03405 PF00005 ABC transporter ISU57_03410 PF02653 Branched-chain amino acid transport system / permease component ISU57_03415 PF07715 TonB-dependent Receptor Plug Domain ISU57_03425 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU57_03425 PF01464 Transglycosylase SLT domain ISU57_03430 PF04362 Bacterial Fe(2+) trafficking ISU57_03435 PF00633 Helix-hairpin-helix motif ISU57_03435 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU57_03435 PF14815 NUDIX domain ISU57_03435 PF10576 Iron-sulfur binding domain of endonuclease III ISU57_03440 PF02390 Putative methyltransferase ISU57_03445 PF04320 Protein with unknown function (DUF469) ISU57_03450 PF04960 Glutaminase ISU57_03455 PF11101 Protein of unknown function (DUF2884) ISU57_03460 PF11101 Protein of unknown function (DUF2884) ISU57_03465 PF16671 Actin cross-linking domain ISU57_03465 PF12146 Serine aminopeptidase, S33 ISU57_03465 PF07634 RtxA repeat ISU57_03465 PF11713 Peptidase C80 family ISU57_03465 PF11647 Membrane Localization Domain ISU57_03470 PF06969 HemN C-terminal domain ISU57_03470 PF04055 Radical SAM superfamily ISU57_03475 PF01725 Ham1 family ISU57_03480 PF02594 Uncharacterised ACR, YggU family COG1872 ISU57_03485 PF02325 YGGT family ISU57_03490 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU57_03490 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU57_03495 PF01168 Alanine racemase, N-terminal domain ISU57_03500 PF00437 Type II/IV secretion system protein ISU57_03505 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU57_03510 PF00795 Carbon-nitrogen hydrolase ISU57_03515 PF03652 Holliday junction resolvase ISU57_03520 PF02622 Uncharacterized ACR, COG1678 ISU57_03525 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU57_03525 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU57_03530 PF04452 RNA methyltransferase ISU57_03535 PF04231 Endonuclease I ISU57_03540 PF10263 SprT-like family ISU57_03540 PF17283 SprT-like zinc ribbon domain ISU57_03545 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU57_03545 PF02772 S-adenosylmethionine synthetase, central domain ISU57_03545 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU57_03550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU57_03550 PF17944 Arginine decarboxylase C-terminal helical extension ISU57_03550 PF17810 Arginine decarboxylase helical bundle domain ISU57_03555 PF00355 Rieske [2Fe-2S] domain ISU57_03565 PF01435 Peptidase family M48 ISU57_03570 PF00456 Transketolase, thiamine diphosphate binding domain ISU57_03570 PF02780 Transketolase, C-terminal domain ISU57_03570 PF02779 Transketolase, pyrimidine binding domain ISU57_03575 PF01797 Transposase IS200 like ISU57_03580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU57_03580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU57_03585 PF00162 Phosphoglycerate kinase ISU57_03590 PF01116 Fructose-bisphosphate aldolase class-II ISU57_03600 PF05552 Conserved TM helix ISU57_03600 PF00924 Mechanosensitive ion channel ISU57_03605 PF01810 LysE type translocator ISU57_03610 PF04402 Protein of unknown function (DUF541) ISU57_03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_03615 PF03466 LysR substrate binding domain ISU57_03620 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU57_03625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU57_03625 PF01842 ACT domain ISU57_03625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU57_03635 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU57_03645 PF05164 Cell division protein ZapA ISU57_03650 PF03695 Uncharacterised protein family (UPF0149) ISU57_03655 PF05195 Aminopeptidase P, N-terminal domain ISU57_03655 PF00557 Metallopeptidase family M24 ISU57_03660 PF01494 FAD binding domain ISU57_03665 PF01494 FAD binding domain ISU57_03670 PF01571 Aminomethyltransferase folate-binding domain ISU57_03670 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU57_03675 PF01597 Glycine cleavage H-protein ISU57_03680 PF02347 Glycine cleavage system P-protein ISU57_03710 PF03006 Haemolysin-III related ISU57_03720 PF01571 Aminomethyltransferase folate-binding domain ISU57_03725 PF03937 Flavinator of succinate dehydrogenase ISU57_03730 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU57_03735 PF00072 Response regulator receiver domain ISU57_03735 PF00486 Transcriptional regulatory protein, C terminal ISU57_03740 PF00512 His Kinase A (phospho-acceptor) domain ISU57_03740 PF00672 HAMP domain ISU57_03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_03745 PF06123 Inner membrane protein CreD ISU57_03750 PF00258 Flavodoxin ISU57_03755 PF02899 Phage integrase, N-terminal SAM-like domain ISU57_03755 PF00589 Phage integrase family ISU57_03760 PF13098 Thioredoxin-like domain ISU57_03760 PF10411 Disulfide bond isomerase protein N-terminus ISU57_03765 PF17768 RecJ OB domain ISU57_03765 PF02272 DHHA1 domain ISU57_03765 PF01368 DHH family ISU57_03775 PF00152 tRNA synthetases class II (D, K and N) ISU57_03775 PF01336 OB-fold nucleic acid binding domain ISU57_03785 PF14659 Phage integrase, N-terminal SAM-like domain ISU57_03785 PF13356 Arm DNA-binding domain ISU57_03785 PF00589 Phage integrase family ISU57_03805 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU57_03810 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU57_03900 PF03551 Transcriptional regulator PadR-like family ISU57_03905 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU57_03915 PF13407 Periplasmic binding protein domain ISU57_03920 PF02653 Branched-chain amino acid transport system / permease component ISU57_03925 PF00005 ABC transporter ISU57_03930 PF17912 MalK OB fold domain ISU57_03930 PF00005 ABC transporter ISU57_03935 PF13416 Bacterial extracellular solute-binding protein ISU57_03940 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_03945 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_03950 PF07745 Glycosyl hydrolase family 53 ISU57_03955 PF08532 Beta-galactosidase trimerisation domain ISU57_03955 PF08533 Beta-galactosidase C-terminal domain ISU57_03955 PF02449 Beta-galactosidase ISU57_03960 PF02378 Phosphotransferase system, EIIC ISU57_03960 PF00367 phosphotransferase system, EIIB ISU57_03965 PF02264 LamB porin ISU57_03970 PF00356 Bacterial regulatory proteins, lacI family ISU57_03975 PF01055 Glycosyl hydrolases family 31 ISU57_03975 PF13802 Galactose mutarotase-like ISU57_03975 PF17137 Domain of unknown function (DUF5110) ISU57_03975 PF16338 Domain of unknown function (DUF4968) ISU57_03980 PF07690 Major Facilitator Superfamily ISU57_03985 PF00356 Bacterial regulatory proteins, lacI family ISU57_03995 PF01116 Fructose-bisphosphate aldolase class-II ISU57_04005 PF00884 Sulfatase ISU57_04010 PF04055 Radical SAM superfamily ISU57_04010 PF13186 Iron-sulfur cluster-binding domain ISU57_04015 PF07470 Glycosyl Hydrolase Family 88 ISU57_04025 PF01979 Amidohydrolase family ISU57_04030 PF03610 PTS system fructose IIA component ISU57_04035 PF03613 PTS system mannose/fructose/sorbose family IID component ISU57_04040 PF03609 PTS system sorbose-specific iic component ISU57_04045 PF03830 PTS system sorbose subfamily IIB component ISU57_04050 PF01380 SIS domain ISU57_04055 PF08013 Tagatose 6 phosphate kinase ISU57_04060 PF00455 DeoR C terminal sensor domain ISU57_04060 PF08220 DeoR-like helix-turn-helix domain ISU57_04065 PF00884 Sulfatase ISU57_04070 PF01797 Transposase IS200 like ISU57_04075 PF00665 Integrase core domain ISU57_04075 PF02796 Helix-turn-helix domain of resolvase ISU57_04080 PF01695 IstB-like ATP binding protein ISU57_04085 PF09093 Lyase, catalytic ISU57_04085 PF09092 Lyase, N terminal ISU57_04085 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU57_04085 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU57_04105 PF00484 Carbonic anhydrase ISU57_04120 PF03958 Bacterial type II/III secretion system short domain ISU57_04120 PF00263 Bacterial type II and III secretion system protein ISU57_04125 PF00437 Type II/IV secretion system protein ISU57_04135 PF08334 Type II secretion system (T2SS), protein G ISU57_04135 PF07963 Prokaryotic N-terminal methylation motif ISU57_04145 PF02501 Type II secretion system (T2SS), protein I ISU57_04145 PF07963 Prokaryotic N-terminal methylation motif ISU57_04150 PF07963 Prokaryotic N-terminal methylation motif ISU57_04150 PF11612 Type II secretion system (T2SS), protein J ISU57_04170 PF06750 Bacterial Peptidase A24 N-terminal domain ISU57_04170 PF01478 Type IV leader peptidase family ISU57_04190 PF00672 HAMP domain ISU57_04190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU57_04190 PF02203 Tar ligand binding domain homologue ISU57_04205 PF03466 LysR substrate binding domain ISU57_04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_04210 PF07690 Major Facilitator Superfamily ISU57_04215 PF03466 LysR substrate binding domain ISU57_04215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_04220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU57_04220 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU57_04225 PF00356 Bacterial regulatory proteins, lacI family ISU57_04230 PF00384 Molybdopterin oxidoreductase ISU57_04230 PF01568 Molydopterin dinucleotide binding domain ISU57_04235 PF01553 Acyltransferase ISU57_04235 PF13193 AMP-binding enzyme C-terminal domain ISU57_04235 PF00501 AMP-binding enzyme ISU57_04240 PF07690 Major Facilitator Superfamily ISU57_04255 PF00248 Aldo/keto reductase family ISU57_04260 PF02976 DNA mismatch repair enzyme MutH ISU57_04265 PF00293 NUDIX domain ISU57_04270 PF01590 GAF domain ISU57_04270 PF05524 PEP-utilising enzyme, N-terminal ISU57_04270 PF00391 PEP-utilising enzyme, mobile domain ISU57_04270 PF02896 PEP-utilising enzyme, TIM barrel domain ISU57_04275 PF01790 Prolipoprotein diacylglyceryl transferase ISU57_04280 PF00303 Thymidylate synthase ISU57_04305 PF17946 RecC C-terminal domain ISU57_04310 PF00675 Insulinase (Peptidase family M16) ISU57_04310 PF05193 Peptidase M16 inactive domain ISU57_04310 PF16187 Middle or third domain of peptidase_M16 ISU57_04315 PF00580 UvrD/REP helicase N-terminal domain ISU57_04315 PF13361 UvrD-like helicase C-terminal domain ISU57_04315 PF12705 PD-(D/E)XK nuclease superfamily ISU57_04320 PF13538 UvrD-like helicase C-terminal domain ISU57_04325 PF00696 Amino acid kinase family ISU57_04325 PF00583 Acetyltransferase (GNAT) family ISU57_04330 PF01520 N-acetylmuramoyl-L-alanine amidase ISU57_04330 PF11741 AMIN domain ISU57_04345 PF03562 MltA specific insert domain ISU57_04345 PF06725 3D domain ISU57_04350 PF00899 ThiF family ISU57_04355 PF02657 Fe-S metabolism associated domain ISU57_04360 PF00266 Aminotransferase class-V ISU57_04370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_04370 PF03466 LysR substrate binding domain ISU57_04375 PF04241 Protein of unknown function (DUF423) ISU57_04380 PF01728 FtsJ-like methyltransferase ISU57_04380 PF18125 RlmM ferredoxin-like domain ISU57_04385 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU57_04385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU57_04390 PF01695 IstB-like ATP binding protein ISU57_04395 PF02796 Helix-turn-helix domain of resolvase ISU57_04395 PF00665 Integrase core domain ISU57_04400 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU57_04400 PF03641 Possible lysine decarboxylase ISU57_04400 PF11892 Domain of unknown function (DUF3412) ISU57_04405 PF14489 QueF-like protein ISU57_04405 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU57_04410 PF07348 Syd protein (SUKH-2) ISU57_04415 PF01797 Transposase IS200 like ISU57_04420 PF04287 tRNA pseudouridine synthase C ISU57_04425 PF00849 RNA pseudouridylate synthase ISU57_04430 PF00258 Flavodoxin ISU57_04435 PF11944 Protein of unknown function (DUF3461) ISU57_04440 PF14602 Hexapeptide repeat of succinyl-transferase ISU57_04440 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU57_04440 PF00132 Bacterial transferase hexapeptide (six repeats) ISU57_04445 PF01966 HD domain ISU57_04445 PF01842 ACT domain ISU57_04445 PF01909 Nucleotidyltransferase domain ISU57_04445 PF08335 GlnD PII-uridylyltransferase ISU57_04450 PF00557 Metallopeptidase family M24 ISU57_04455 PF00318 Ribosomal protein S2 ISU57_04460 PF00889 Elongation factor TS ISU57_04465 PF00696 Amino acid kinase family ISU57_04470 PF01765 Ribosome recycling factor ISU57_04475 PF13288 DXP reductoisomerase C-terminal domain ISU57_04475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU57_04475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU57_04480 PF01255 Putative undecaprenyl diphosphate synthase ISU57_04490 PF17820 PDZ domain ISU57_04490 PF02163 Peptidase family M50 ISU57_04495 PF07244 Surface antigen variable number repeat ISU57_04495 PF01103 Surface antigen ISU57_04500 PF03938 Outer membrane protein (OmpH-like) ISU57_04505 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU57_04505 PF00132 Bacterial transferase hexapeptide (six repeats) ISU57_04510 PF07977 FabA-like domain ISU57_04515 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU57_04515 PF00132 Bacterial transferase hexapeptide (six repeats) ISU57_04520 PF02684 Lipid-A-disaccharide synthetase ISU57_04525 PF01351 Ribonuclease HII ISU57_04530 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU57_04530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU57_04530 PF01336 OB-fold nucleic acid binding domain ISU57_04530 PF02811 PHP domain ISU57_04530 PF14579 Helix-hairpin-helix motif ISU57_04535 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU57_04540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU57_04545 PF11734 TilS substrate C-terminal domain ISU57_04545 PF09179 TilS substrate binding domain ISU57_04545 PF01171 PP-loop family ISU57_04550 PF00034 Cytochrome c ISU57_04555 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU57_04560 PF06786 Uncharacterised protein family (UPF0253) ISU57_04565 PF07152 YaeQ protein ISU57_04570 PF00472 RF-1 domain ISU57_04575 PF04170 NlpE N-terminal domain ISU57_04575 PF17185 NlpE C-terminal OB domain ISU57_04580 PF03129 Anticodon binding domain ISU57_04580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU57_04580 PF04073 Aminoacyl-tRNA editing domain ISU57_04585 PF01980 tRNA-methyltransferase O ISU57_04585 PF18389 TrmO C-terminal domain ISU57_04590 PF16358 RcsF lipoprotein ISU57_04595 PF03180 NLPA lipoprotein ISU57_04600 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_04605 PF09383 NIL domain ISU57_04605 PF00005 ABC transporter ISU57_04640 PF00248 Aldo/keto reductase family ISU57_04650 PF03372 Endonuclease/Exonuclease/phosphatase family ISU57_04655 PF01464 Transglycosylase SLT domain ISU57_04655 PF01476 LysM domain ISU57_04660 PF00753 Metallo-beta-lactamase superfamily ISU57_04660 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU57_04665 PF08241 Methyltransferase domain ISU57_04670 PF00075 RNase H ISU57_04675 PF00929 Exonuclease ISU57_04685 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU57_04695 PF01695 IstB-like ATP binding protein ISU57_04700 PF00665 Integrase core domain ISU57_04700 PF02796 Helix-turn-helix domain of resolvase ISU57_04710 PF05973 Phage derived protein Gp49-like (DUF891) ISU57_04760 PF00589 Phage integrase family ISU57_04760 PF13356 Arm DNA-binding domain ISU57_04765 PF01797 Transposase IS200 like ISU57_04775 PF01668 SmpB protein ISU57_04780 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU57_04785 PF03658 RnfH family Ubiquitin ISU57_04790 PF04355 SmpA / OmlA family ISU57_04795 PF02463 RecF/RecN/SMC N terminal domain ISU57_04800 PF01513 ATP-NAD kinase ISU57_04805 PF01025 GrpE ISU57_04810 PF00285 Citrate synthase, C-terminal domain ISU57_04815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU57_04820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU57_04825 PF02910 Fumarate reductase flavoprotein C-term ISU57_04825 PF00890 FAD binding domain ISU57_04830 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU57_04835 PF02779 Transketolase, pyrimidine binding domain ISU57_04835 PF16870 2-oxoglutarate dehydrogenase C-terminal ISU57_04835 PF00676 Dehydrogenase E1 component ISU57_04835 PF16078 2-oxoglutarate dehydrogenase N-terminus ISU57_04840 PF02817 e3 binding domain ISU57_04840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU57_04840 PF00364 Biotin-requiring enzyme ISU57_04845 PF08442 ATP-grasp domain ISU57_04845 PF00549 CoA-ligase ISU57_04850 PF02629 CoA binding domain ISU57_04850 PF00549 CoA-ligase ISU57_04855 PF01654 Cytochrome bd terminal oxidase subunit I ISU57_04860 PF02322 Cytochrome bd terminal oxidase subunit II ISU57_04865 PF08173 Membrane bound YbgT-like protein ISU57_04870 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU57_04875 PF03061 Thioesterase superfamily ISU57_04880 PF01618 MotA/TolQ/ExbB proton channel family ISU57_04885 PF02472 Biopolymer transport protein ExbD/TolR ISU57_04890 PF06519 TolA C-terminal ISU57_04890 PF06519 TolA C-terminal ISU57_04895 PF07676 WD40-like Beta Propeller Repeat ISU57_04895 PF04052 TolB amino-terminal domain ISU57_04900 PF00691 OmpA family ISU57_04905 PF13174 Tetratricopeptide repeat ISU57_04905 PF16331 TolA binding protein trimerisation ISU57_04925 PF02445 Quinolinate synthetase A protein ISU57_04930 PF04973 Nicotinamide mononucleotide transporter ISU57_04935 PF01545 Cation efflux family ISU57_04940 PF00793 DAHP synthetase I family ISU57_04945 PF00300 Histidine phosphatase superfamily (branch 1) ISU57_04955 PF01263 Aldose 1-epimerase ISU57_04965 PF00288 GHMP kinases N terminal domain ISU57_04965 PF08544 GHMP kinases C terminal ISU57_04965 PF10509 Galactokinase galactose-binding signature ISU57_04970 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU57_04970 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU57_04975 PF16363 GDP-mannose 4,6 dehydratase ISU57_04985 PF00005 ABC transporter ISU57_04990 PF03459 TOBE domain ISU57_04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_04995 PF10766 Multidrug efflux pump-associated protein AcrZ ISU57_05005 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05010 PF00005 ABC transporter ISU57_05010 PF03459 TOBE domain ISU57_05020 PF10282 Lactonase, 7-bladed beta-propeller ISU57_05025 PF00202 Aminotransferase class-III ISU57_05030 PF04055 Radical SAM superfamily ISU57_05030 PF06968 Biotin and Thiamin Synthesis associated domain ISU57_05035 PF00155 Aminotransferase class I and II ISU57_05040 PF08241 Methyltransferase domain ISU57_05050 PF00005 ABC transporter ISU57_05050 PF09383 NIL domain ISU57_05055 PF12344 Ultra-violet resistance protein B ISU57_05055 PF02151 UvrB/uvrC motif ISU57_05055 PF04851 Type III restriction enzyme, res subunit ISU57_05055 PF17757 UvrB interaction domain ISU57_05055 PF00271 Helicase conserved C-terminal domain ISU57_05060 PF09905 DNA-binding protein VF530 ISU57_05065 PF01933 Uncharacterised protein family UPF0052 ISU57_05070 PF06463 Molybdenum Cofactor Synthesis C ISU57_05070 PF04055 Radical SAM superfamily ISU57_05075 PF01967 MoaC family ISU57_05080 PF02597 ThiS family ISU57_05085 PF02391 MoaE protein ISU57_05090 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU57_05095 PF01797 Transposase IS200 like ISU57_05105 PF01207 Dihydrouridine synthase (Dus) ISU57_05115 PF00768 D-alanyl-D-alanine carboxypeptidase ISU57_05120 PF09330 D-lactate dehydrogenase, membrane binding ISU57_05120 PF01565 FAD binding domain ISU57_05125 PF01928 CYTH domain ISU57_05130 PF01844 HNH endonuclease ISU57_05140 PF04226 Transglycosylase associated protein ISU57_05145 PF00005 ABC transporter ISU57_05155 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05160 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05165 PF07308 Protein of unknown function (DUF1456) ISU57_05170 PF02954 Bacterial regulatory protein, Fis family ISU57_05170 PF13188 PAS domain ISU57_05170 PF00158 Sigma-54 interaction domain ISU57_05175 PF02653 Branched-chain amino acid transport system / permease component ISU57_05180 PF02653 Branched-chain amino acid transport system / permease component ISU57_05185 PF00005 ABC transporter ISU57_05190 PF00005 ABC transporter ISU57_05205 PF00581 Rhodanese-like domain ISU57_05210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU57_05215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU57_05220 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05225 PF00005 ABC transporter ISU57_05230 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05235 PF13520 Amino acid permease ISU57_05240 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU57_05240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU57_05240 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU57_05250 PF00892 EamA-like transporter family ISU57_05255 PF00267 Gram-negative porin ISU57_05260 PF06733 DEAD_2 ISU57_05260 PF13307 Helicase C-terminal domain ISU57_05265 PF00199 Catalase ISU57_05265 PF06628 Catalase-related immune-responsive ISU57_05270 PF07437 YfaZ precursor ISU57_05275 PF03222 Tryptophan/tyrosine permease family ISU57_05280 PF00994 Probable molybdopterin binding domain ISU57_05285 PF03974 Ecotin ISU57_05290 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU57_05295 PF00268 Ribonucleotide reductase, small chain ISU57_05300 PF00317 Ribonucleotide reductase, all-alpha domain ISU57_05300 PF02867 Ribonucleotide reductase, barrel domain ISU57_05300 PF03477 ATP cone domain ISU57_05310 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU57_05310 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU57_05315 PF00072 Response regulator receiver domain ISU57_05315 PF00512 His Kinase A (phospho-acceptor) domain ISU57_05315 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU57_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_05320 PF00072 Response regulator receiver domain ISU57_05320 PF00196 Bacterial regulatory proteins, luxR family ISU57_05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_05325 PF16359 RcsD-ABL domain ISU57_05325 PF01627 Hpt domain ISU57_05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_05330 PF01627 Hpt domain ISU57_05330 PF16359 RcsD-ABL domain ISU57_05335 PF07690 Major Facilitator Superfamily ISU57_05340 PF00267 Gram-negative porin ISU57_05345 PF01797 Transposase IS200 like ISU57_05360 PF00144 Beta-lactamase ISU57_05370 PF12706 Beta-lactamase superfamily domain ISU57_05375 PF00672 HAMP domain ISU57_05375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU57_05375 PF02743 Cache domain ISU57_05380 PF01278 Omptin family ISU57_05385 PF06183 DinI-like family ISU57_05390 PF01381 Helix-turn-helix ISU57_05390 PF00717 Peptidase S24-like ISU57_05395 PF06530 Phage antitermination protein Q ISU57_05400 PF07005 Sugar-binding N-terminal domain ISU57_05400 PF17042 Nucleotide-binding C-terminal domain ISU57_05410 PF00455 DeoR C terminal sensor domain ISU57_05410 PF08220 DeoR-like helix-turn-helix domain ISU57_05415 PF01261 Xylose isomerase-like TIM barrel ISU57_05435 PF17482 Phage tail sheath C-terminal domain ISU57_05435 PF04984 Phage tail sheath protein subtilisin-like domain ISU57_05475 PF04865 Baseplate J-like protein ISU57_05490 PF07484 Phage Tail Collar Domain ISU57_05495 PF01380 SIS domain ISU57_05495 PF01418 Helix-turn-helix domain, rpiR family ISU57_05500 PF00232 Glycosyl hydrolase family 1 ISU57_05520 PF05638 Type VI secretion system effector, Hcp ISU57_05535 PF11893 Domain of unknown function (DUF3413) ISU57_05535 PF00884 Sulfatase ISU57_05540 PF07208 Protein of unknown function (DUF1414) ISU57_05545 PF04245 37-kD nucleoid-associated bacterial protein ISU57_05550 PF01797 Transposase IS200 like ISU57_05555 PF01386 Ribosomal L25p family ISU57_05560 PF00271 Helicase conserved C-terminal domain ISU57_05560 PF04851 Type III restriction enzyme, res subunit ISU57_05565 PF01479 S4 domain ISU57_05565 PF00849 RNA pseudouridylate synthase ISU57_05570 PF07690 Major Facilitator Superfamily ISU57_05575 PF13989 YejG-like protein ISU57_05580 PF00005 ABC transporter ISU57_05580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_05585 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU57_05585 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05590 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_05600 PF00563 EAL domain ISU57_05600 PF12792 CSS motif domain associated with EAL ISU57_05605 PF00877 NlpC/P60 family ISU57_05610 PF01569 PAP2 superfamily ISU57_05615 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU57_05615 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU57_05625 PF00392 Bacterial regulatory proteins, gntR family ISU57_05625 PF07729 FCD domain ISU57_05630 PF08125 Mannitol dehydrogenase C-terminal domain ISU57_05630 PF01232 Mannitol dehydrogenase Rossmann domain ISU57_05635 PF03786 D-mannonate dehydratase (UxuA) ISU57_05640 PF09285 Elongation factor P, C-terminal ISU57_05640 PF08207 Elongation factor P (EF-P) KOW-like domain ISU57_05640 PF01132 Elongation factor P (EF-P) OB domain ISU57_05645 PF03222 Tryptophan/tyrosine permease family ISU57_05650 PF03692 Putative zinc- or iron-chelating domain ISU57_05660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU57_05660 PF01842 ACT domain ISU57_05660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU57_05670 PF00171 Aldehyde dehydrogenase family ISU57_05675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_05675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_05680 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU57_05690 PF00005 ABC transporter ISU57_05695 PF02653 Branched-chain amino acid transport system / permease component ISU57_05700 PF00293 NUDIX domain ISU57_05705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU57_05705 PF00381 PTS HPr component phosphorylation site ISU57_05710 PF00294 pfkB family carbohydrate kinase ISU57_05715 PF02378 Phosphotransferase system, EIIC ISU57_05715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU57_05720 PF00486 Transcriptional regulatory protein, C terminal ISU57_05725 PF17550 Family of unknown function ISU57_05735 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_05735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_05740 PF00577 Outer membrane usher protein ISU57_05740 PF13954 PapC N-terminal domain ISU57_05740 PF13953 PapC C-terminal domain ISU57_05745 PF01261 Xylose isomerase-like TIM barrel ISU57_05750 PF03601 Conserved hypothetical protein 698 ISU57_05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_05755 PF03466 LysR substrate binding domain ISU57_05760 PF00324 Amino acid permease ISU57_05770 PF01032 FecCD transport family ISU57_05775 PF00005 ABC transporter ISU57_05780 PF07715 TonB-dependent Receptor Plug Domain ISU57_05780 PF00593 TonB dependent receptor ISU57_05785 PF13417 Glutathione S-transferase, N-terminal domain ISU57_05785 PF00043 Glutathione S-transferase, C-terminal domain ISU57_05800 PF03180 NLPA lipoprotein ISU57_05805 PF09383 NIL domain ISU57_05805 PF00005 ABC transporter ISU57_05810 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05815 PF07943 Penicillin-binding protein 5, C-terminal domain ISU57_05815 PF00768 D-alanyl-D-alanine carboxypeptidase ISU57_05830 PF00455 DeoR C terminal sensor domain ISU57_05830 PF08220 DeoR-like helix-turn-helix domain ISU57_05835 PF01791 DeoC/LacD family aldolase ISU57_05840 PF01569 PAP2 superfamily ISU57_05850 PF02080 TrkA-C domain ISU57_05850 PF06826 Predicted Permease Membrane Region ISU57_05855 PF00462 Glutaredoxin ISU57_05860 PF07214 Protein of unknown function (DUF1418) ISU57_05865 PF10722 Putative bacterial sensory transduction regulator ISU57_05870 PF13416 Bacterial extracellular solute-binding protein ISU57_05875 PF00005 ABC transporter ISU57_05875 PF08402 TOBE domain ISU57_05880 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05885 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05890 PF10767 Protein of unknown function (DUF2593) ISU57_05895 PF05958 tRNA (Uracil-5-)-methyltransferase ISU57_05900 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_05925 PF01032 FecCD transport family ISU57_05930 PF01032 FecCD transport family ISU57_05935 PF00005 ABC transporter ISU57_05940 PF03059 Nicotianamine synthase protein ISU57_05945 PF10100 Staphylopine dehydrogenase ISU57_05950 PF00892 EamA-like transporter family ISU57_05960 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05965 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_05970 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_05975 PF00005 ABC transporter ISU57_05980 PF01817 Chorismate mutase type II ISU57_05985 PF12883 Protein of unknown function (DUF3828) ISU57_05990 PF01370 NAD dependent epimerase/dehydratase family ISU57_05995 PF11066 Protein of unknown function (DUF2867) ISU57_05995 PF13460 NAD(P)H-binding ISU57_06000 PF01212 Beta-eliminating lyase ISU57_06010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU57_06010 PF00205 Thiamine pyrophosphate enzyme, central domain ISU57_06010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU57_06015 PF00175 Oxidoreductase NAD-binding domain ISU57_06015 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU57_06015 PF00970 Oxidoreductase FAD-binding domain ISU57_06020 PF03063 Prismane/CO dehydrogenase family ISU57_06025 PF03956 Lysine exporter LysO ISU57_06030 PF11398 Protein of unknown function (DUF2813) ISU57_06035 PF04393 Protein of unknown function (DUF535) ISU57_06040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_06045 PF00005 ABC transporter ISU57_06045 PF02687 FtsX-like permease family ISU57_06045 PF12704 MacB-like periplasmic core domain ISU57_06050 PF00313 'Cold-shock' DNA-binding domain ISU57_06055 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU57_06060 PF02861 Clp amino terminal domain, pathogenicity island component ISU57_06060 PF07724 AAA domain (Cdc48 subfamily) ISU57_06060 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_06060 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_06060 PF17871 AAA lid domain ISU57_06065 PF01797 Transposase IS200 like ISU57_06070 PF01176 Translation initiation factor 1A / IF-1 ISU57_06075 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU57_06080 PF00664 ABC transporter transmembrane region ISU57_06080 PF00005 ABC transporter ISU57_06085 PF00664 ABC transporter transmembrane region ISU57_06085 PF00005 ABC transporter ISU57_06090 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_06095 PF01037 Lrp/AsnC ligand binding domain ISU57_06100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU57_06100 PF17854 FtsK alpha domain ISU57_06100 PF09397 Ftsk gamma domain ISU57_06100 PF01580 FtsK/SpoIIIE family ISU57_06105 PF03548 Outer membrane lipoprotein carrier protein LolA ISU57_06110 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_06110 PF16193 AAA C-terminal domain ISU57_06110 PF12002 MgsA AAA+ ATPase C terminal ISU57_06115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU57_06115 PF02403 Seryl-tRNA synthetase N-terminal domain ISU57_06125 PF01695 IstB-like ATP binding protein ISU57_06130 PF00665 Integrase core domain ISU57_06130 PF02796 Helix-turn-helix domain of resolvase ISU57_06140 PF04055 Radical SAM superfamily ISU57_06150 PF01228 Glycine radical ISU57_06150 PF02901 Pyruvate formate lyase-like ISU57_06155 PF01226 Formate/nitrite transporter ISU57_06160 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU57_06160 PF18381 YcaO cyclodehydratase C-terminal domain ISU57_06165 PF17763 Glutaminase/Asparaginase C-terminal domain ISU57_06165 PF00710 Asparaginase, N-terminal ISU57_06170 PF03895 YadA-like membrane anchor domain ISU57_06170 PF05658 Head domain of trimeric autotransporter adhesin ISU57_06170 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU57_06170 PF03895 YadA-like membrane anchor domain ISU57_06170 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU57_06170 PF05658 Head domain of trimeric autotransporter adhesin ISU57_06170 PF13018 Extended Signal Peptide of Type V secretion system ISU57_06170 PF13018 Extended Signal Peptide of Type V secretion system ISU57_06180 PF00266 Aminotransferase class-V ISU57_06185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU57_06190 PF02224 Cytidylate kinase ISU57_06195 PF00575 S1 RNA binding domain ISU57_06200 PF00216 Bacterial DNA-binding protein ISU57_06205 PF03772 Competence protein ISU57_06205 PF00753 Metallo-beta-lactamase superfamily ISU57_06210 PF00005 ABC transporter ISU57_06210 PF00664 ABC transporter transmembrane region ISU57_06215 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU57_06220 PF07063 Domain of unknown function (DUF1338) ISU57_06225 PF00313 'Cold-shock' DNA-binding domain ISU57_06230 PF03966 Trm112p-like protein ISU57_06235 PF02348 Cytidylyltransferase ISU57_06240 PF01636 Phosphotransferase enzyme family ISU57_06245 PF13847 Methyltransferase domain ISU57_06250 PF03882 MukF winged-helix domain ISU57_06250 PF17193 MukF C-terminal domain ISU57_06250 PF17192 MukF middle domain ISU57_06255 PF04288 MukE-like family ISU57_06260 PF04310 MukB N-terminal ISU57_06260 PF16330 MukB hinge domain ISU57_06265 PF01797 Transposase IS200 like ISU57_06270 PF03734 L,D-transpeptidase catalytic domain ISU57_06270 PF01471 Putative peptidoglycan binding domain ISU57_06275 PF05951 Bacterial protein of unknown function (DUF882) ISU57_06280 PF00753 Metallo-beta-lactamase superfamily ISU57_06290 PF00155 Aminotransferase class I and II ISU57_06295 PF00267 Gram-negative porin ISU57_06300 PF01336 OB-fold nucleic acid binding domain ISU57_06300 PF00152 tRNA synthetases class II (D, K and N) ISU57_06305 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU57_06305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU57_06310 PF01433 Peptidase family M1 domain ISU57_06310 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU57_06310 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU57_06315 PF01180 Dihydroorotate dehydrogenase ISU57_06320 PF07126 Cell-division protein ZapC ISU57_06325 PF03476 MOSC N-terminal beta barrel domain ISU57_06325 PF03473 MOSC domain ISU57_06325 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU57_06330 PF02926 THUMP domain ISU57_06330 PF01170 Putative RNA methylase family UPF0020 ISU57_06330 PF10672 S-adenosylmethionine-dependent methyltransferase ISU57_06335 PF12848 ABC transporter ISU57_06335 PF00005 ABC transporter ISU57_06335 PF16326 ABC transporter C-terminal domain ISU57_06340 PF04403 Paraquat-inducible protein A ISU57_06345 PF02470 MlaD protein ISU57_06350 PF03886 ABC-type transport auxiliary lipoprotein component ISU57_06355 PF04957 Ribosome modulation factor ISU57_06360 PF01797 Transposase IS200 like ISU57_06370 PF01695 IstB-like ATP binding protein ISU57_06375 PF02796 Helix-turn-helix domain of resolvase ISU57_06375 PF00665 Integrase core domain ISU57_06390 PF07977 FabA-like domain ISU57_06395 PF13654 AAA domain ISU57_06395 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU57_06400 PF17414 MatP C-terminal ribbon-helix-helix domain ISU57_06400 PF06303 MatP N-terminal domain ISU57_06405 PF01797 Transposase IS200 like ISU57_06410 PF01389 OmpA-like transmembrane domain ISU57_06410 PF00691 OmpA family ISU57_06415 PF03846 Cell division inhibitor SulA ISU57_06420 PF04993 TfoX N-terminal domain ISU57_06420 PF04994 TfoX C-terminal domain ISU57_06425 PF12805 FUSC-like inner membrane protein yccS ISU57_06430 PF03733 Inner membrane component domain ISU57_06435 PF12462 DNA helicase IV / RNA helicase N terminal ISU57_06435 PF13361 UvrD-like helicase C-terminal domain ISU57_06435 PF00580 UvrD/REP helicase N-terminal domain ISU57_06440 PF02142 MGS-like domain ISU57_06445 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU57_06450 PF13380 CoA binding domain ISU57_06455 PF08755 Hemimethylated DNA-binding protein YccV like ISU57_06460 PF17785 PUA-like domain ISU57_06460 PF10672 S-adenosylmethionine-dependent methyltransferase ISU57_06465 PF00708 Acylphosphatase ISU57_06470 PF04358 DsrC like protein ISU57_06490 PF01565 FAD binding domain ISU57_06490 PF08031 Berberine and berberine like ISU57_06505 PF07977 FabA-like domain ISU57_06510 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU57_06510 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU57_06520 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU57_06520 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU57_06530 PF00378 Enoyl-CoA hydratase/isomerase ISU57_06545 PF00550 Phosphopantetheine attachment site ISU57_06550 PF00698 Acyl transferase domain ISU57_06560 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU57_06575 PF05736 OprF membrane domain ISU57_06575 PF00691 OmpA family ISU57_06585 PF17871 AAA lid domain ISU57_06585 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_06585 PF07724 AAA domain (Cdc48 subfamily) ISU57_06585 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_06590 PF04717 Type VI secretion system, phage-baseplate injector ISU57_06590 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU57_06590 PF13296 Putative type VI secretion system Rhs element Vgr ISU57_06680 PF00005 ABC transporter ISU57_06680 PF12848 ABC transporter ISU57_06690 PF00872 Transposase, Mutator family ISU57_06695 PF00899 ThiF family ISU57_06700 PF00994 Probable molybdopterin binding domain ISU57_06700 PF03454 MoeA C-terminal region (domain IV) ISU57_06700 PF03453 MoeA N-terminal region (domain I and II) ISU57_06710 PF00005 ABC transporter ISU57_06715 PF13533 Biotin-lipoyl like ISU57_06730 PF00756 Putative esterase ISU57_06735 PF08240 Alcohol dehydrogenase GroES-like domain ISU57_06735 PF00107 Zinc-binding dehydrogenase ISU57_06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_06740 PF03466 LysR substrate binding domain ISU57_06745 PF06779 Uncharacterised MFS-type transporter YbfB ISU57_06750 PF01227 GTP cyclohydrolase I ISU57_06755 PF04235 Protein of unknown function (DUF418) ISU57_06760 PF13407 Periplasmic binding protein domain ISU57_06765 PF00005 ABC transporter ISU57_06770 PF02653 Branched-chain amino acid transport system / permease component ISU57_06775 PF02698 DUF218 domain ISU57_06780 PF03949 Malic enzyme, NAD binding domain ISU57_06780 PF00390 Malic enzyme, N-terminal domain ISU57_06785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU57_06785 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU57_06790 PF04172 LrgB-like family ISU57_06795 PF03788 LrgA family ISU57_06800 PF07690 Major Facilitator Superfamily ISU57_06820 PF01797 Transposase IS200 like ISU57_06825 PF09334 tRNA synthetases class I (M) ISU57_06825 PF01588 Putative tRNA binding domain ISU57_06830 PF10609 NUBPL iron-transfer P-loop NTPase ISU57_06835 PF00485 Phosphoribulokinase / Uridine kinase family ISU57_06840 PF00692 dUTPase ISU57_06845 PF05170 AsmA family ISU57_06850 PF03741 Integral membrane protein TerC family ISU57_06850 PF03471 Transporter associated domain ISU57_06850 PF00571 CBS domain ISU57_06855 PF11575 FhuF 2Fe-2S C-terminal domain ISU57_06855 PF06276 Ferric iron reductase FhuF-like transporter ISU57_06860 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU57_06865 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU57_06875 PF06276 Ferric iron reductase FhuF-like transporter ISU57_06875 PF04183 IucA / IucC family ISU57_06880 PF00005 ABC transporter ISU57_06885 PF01032 FecCD transport family ISU57_06890 PF01032 FecCD transport family ISU57_06895 PF01497 Periplasmic binding protein ISU57_06900 PF07715 TonB-dependent Receptor Plug Domain ISU57_06900 PF07660 Secretin and TonB N terminus short domain ISU57_06900 PF00593 TonB dependent receptor ISU57_06910 PF00483 Nucleotidyl transferase ISU57_06915 PF00483 Nucleotidyl transferase ISU57_06920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU57_06920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU57_06925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU57_06925 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU57_06930 PF00977 Histidine biosynthesis protein ISU57_06935 PF00977 Histidine biosynthesis protein ISU57_06940 PF00117 Glutamine amidotransferase class-I ISU57_06945 PF00475 Imidazoleglycerol-phosphate dehydratase ISU57_06950 PF00155 Aminotransferase class I and II ISU57_06955 PF00815 Histidinol dehydrogenase ISU57_06960 PF01634 ATP phosphoribosyltransferase ISU57_06960 PF08029 HisG, C-terminal domain ISU57_06970 PF01370 NAD dependent epimerase/dehydratase family ISU57_06985 PF02653 Branched-chain amino acid transport system / permease component ISU57_06990 PF00005 ABC transporter ISU57_06995 PF00005 ABC transporter ISU57_07000 PF00465 Iron-containing alcohol dehydrogenase ISU57_07005 PF13520 Amino acid permease ISU57_07015 PF00929 Exonuclease ISU57_07015 PF08411 Exonuclease C-terminal ISU57_07025 PF04363 Protein of unknown function (DUF496) ISU57_07030 PF00872 Transposase, Mutator family ISU57_07035 PF09134 Invasin, domain 3 ISU57_07035 PF11924 Inverse autotransporter, beta-domain ISU57_07035 PF02369 Bacterial Ig-like domain (group 1) ISU57_07040 PF07690 Major Facilitator Superfamily ISU57_07045 PF04134 Protein of unknown function, DUF393 ISU57_07055 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU57_07060 PF13378 Enolase C-terminal domain-like ISU57_07060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU57_07065 PF01070 FMN-dependent dehydrogenase ISU57_07070 PF00764 Arginosuccinate synthase ISU57_07075 PF01554 MatE ISU57_07085 PF01522 Polysaccharide deacetylase ISU57_07095 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU57_07105 PF00196 Bacterial regulatory proteins, luxR family ISU57_07105 PF00072 Response regulator receiver domain ISU57_07110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU57_07120 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU57_07125 PF01648 4'-phosphopantetheinyl transferase superfamily ISU57_07125 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU57_07135 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU57_07135 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU57_07140 PF01306 LacY proton/sugar symporter ISU57_07145 PF00872 Transposase, Mutator family ISU57_07155 PF02796 Helix-turn-helix domain of resolvase ISU57_07155 PF00665 Integrase core domain ISU57_07160 PF01695 IstB-like ATP binding protein ISU57_07170 PF00970 Oxidoreductase FAD-binding domain ISU57_07170 PF00175 Oxidoreductase NAD-binding domain ISU57_07170 PF00042 Globin ISU57_07175 PF00464 Serine hydroxymethyltransferase ISU57_07185 PF13505 Outer membrane protein beta-barrel domain ISU57_07190 PF12832 MFS_1 like family ISU57_07195 PF00874 PRD domain ISU57_07200 PF06226 Protein of unknown function (DUF1007) ISU57_07205 PF03824 High-affinity nickel-transport protein ISU57_07210 PF00459 Inositol monophosphatase family ISU57_07215 PF00588 SpoU rRNA Methylase family ISU57_07220 PF02082 Transcriptional regulator ISU57_07225 PF00266 Aminotransferase class-V ISU57_07230 PF01592 NifU-like N terminal domain ISU57_07235 PF01521 Iron-sulphur cluster biosynthesis ISU57_07240 PF00226 DnaJ domain ISU57_07240 PF07743 HSCB C-terminal oligomerisation domain ISU57_07245 PF00012 Hsp70 protein ISU57_07250 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU57_07255 PF04384 Iron-sulphur cluster assembly ISU57_07260 PF00883 Cytosol aminopeptidase family, catalytic domain ISU57_07260 PF12404 Peptidase ISU57_07265 PF14581 SseB protein C-terminal domain ISU57_07265 PF07179 SseB protein N-terminal domain ISU57_07280 PF03797 Autotransporter beta-domain ISU57_07280 PF03212 Pertactin ISU57_07280 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU57_07285 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU57_07285 PF03797 Autotransporter beta-domain ISU57_07285 PF03212 Pertactin ISU57_07295 PF00334 Nucleoside diphosphate kinase ISU57_07300 PF04055 Radical SAM superfamily ISU57_07310 PF13464 Domain of unknown function (DUF4115) ISU57_07315 PF04551 GcpE protein ISU57_07320 PF03129 Anticodon binding domain ISU57_07320 PF13393 Histidyl-tRNA synthetase ISU57_07325 PF09976 Tetratricopeptide repeat-like domain ISU57_07330 PF13360 PQQ-like domain ISU57_07335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU57_07335 PF01926 50S ribosome-binding GTPase ISU57_07345 PF07191 zinc-ribbons ISU57_07350 PF02601 Exonuclease VII, large subunit ISU57_07350 PF13742 OB-fold nucleic acid binding domain ISU57_07355 PF00571 CBS domain ISU57_07355 PF00478 IMP dehydrogenase / GMP reductase domain ISU57_07360 PF00117 Glutamine amidotransferase class-I ISU57_07360 PF00958 GMP synthase C terminal domain ISU57_07360 PF02540 NAD synthase ISU57_07365 PF01797 Transposase IS200 like ISU57_07370 PF05638 Type VI secretion system effector, Hcp ISU57_07400 PF00872 Transposase, Mutator family ISU57_07415 PF08543 Phosphomethylpyrimidine kinase ISU57_07440 PF00781 Diacylglycerol kinase catalytic domain ISU57_07445 PF16325 Peptidase family U32 C-terminal domain ISU57_07445 PF01136 Peptidase family U32 ISU57_07450 PF07411 Domain of unknown function (DUF1508) ISU57_07455 PF00486 Transcriptional regulatory protein, C terminal ISU57_07455 PF00072 Response regulator receiver domain ISU57_07465 PF07690 Major Facilitator Superfamily ISU57_07470 PF00873 AcrB/AcrD/AcrF family ISU57_07475 PF00873 AcrB/AcrD/AcrF family ISU57_07480 PF13533 Biotin-lipoyl like ISU57_07485 PF00005 ABC transporter ISU57_07485 PF08402 TOBE domain ISU57_07490 PF00392 Bacterial regulatory proteins, gntR family ISU57_07490 PF00155 Aminotransferase class I and II ISU57_07495 PF00202 Aminotransferase class-III ISU57_07505 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_07510 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_07515 PF00012 Hsp70 protein ISU57_07520 PF03448 MgtE intracellular N domain ISU57_07520 PF01769 Divalent cation transporter ISU57_07520 PF00571 CBS domain ISU57_07530 PF02541 Ppx/GppA phosphatase family ISU57_07535 PF02503 Polyphosphate kinase middle domain ISU57_07535 PF13090 Polyphosphate kinase C-terminal domain 2 ISU57_07535 PF13089 Polyphosphate kinase N-terminal domain ISU57_07535 PF17941 Polyphosphate kinase C-terminal domain 1 ISU57_07540 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_07545 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_07550 PF00005 ABC transporter ISU57_07560 PF13302 Acetyltransferase (GNAT) domain ISU57_07565 PF00551 Formyl transferase ISU57_07570 PF02769 AIR synthase related protein, C-terminal domain ISU57_07570 PF00586 AIR synthase related protein, N-terminal domain ISU57_07580 PF01797 Transposase IS200 like ISU57_07585 PF00308 Bacterial dnaA protein ISU57_07590 PF03960 ArsC family ISU57_07595 PF01435 Peptidase family M48 ISU57_07595 PF07720 Tetratricopeptide repeat ISU57_07600 PF01594 AI-2E family transporter ISU57_07610 PF00578 AhpC/TSA family ISU57_07615 PF01842 ACT domain ISU57_07620 PF00701 Dihydrodipicolinate synthetase family ISU57_07625 PF06804 NlpB/DapX lipoprotein ISU57_07630 PF01797 Transposase IS200 like ISU57_07635 PF01259 SAICAR synthetase ISU57_07640 PF04228 Putative neutral zinc metallopeptidase ISU57_07645 PF04284 Protein of unknown function (DUF441) ISU57_07650 PF08351 Domain of unknown function (DUF1726) ISU57_07650 PF05127 Helicase ISU57_07650 PF13718 GNAT acetyltransferase 2 ISU57_07650 PF17176 tRNA-binding domain ISU57_07655 PF13980 Uncharacterised protein family (UPF0370) ISU57_07660 PF02557 D-alanyl-D-alanine carboxypeptidase ISU57_07665 PF01546 Peptidase family M20/M25/M40 ISU57_07665 PF07687 Peptidase dimerisation domain ISU57_07670 PF03960 ArsC family ISU57_07685 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_07690 PF08402 TOBE domain ISU57_07690 PF00005 ABC transporter ISU57_07700 PF00884 Sulfatase ISU57_07705 PF04055 Radical SAM superfamily ISU57_07705 PF13186 Iron-sulfur cluster-binding domain ISU57_07710 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU57_07720 PF00873 AcrB/AcrD/AcrF family ISU57_07730 PF00072 Response regulator receiver domain ISU57_07730 PF00196 Bacterial regulatory proteins, luxR family ISU57_07735 PF12800 4Fe-4S binding domain ISU57_07735 PF13187 4Fe-4S dicluster domain ISU57_07735 PF00037 4Fe-4S binding domain ISU57_07740 PF03927 NapD protein ISU57_07750 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU57_07755 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU57_07760 PF00293 NUDIX domain ISU57_07765 PF03949 Malic enzyme, NAD binding domain ISU57_07765 PF00390 Malic enzyme, N-terminal domain ISU57_07765 PF01515 Phosphate acetyl/butaryl transferase ISU57_07770 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU57_07775 PF01218 Coproporphyrinogen III oxidase ISU57_07780 PF00583 Acetyltransferase (GNAT) family ISU57_07790 PF03797 Autotransporter beta-domain ISU57_07790 PF13018 Extended Signal Peptide of Type V secretion system ISU57_07790 PF03212 Pertactin ISU57_07790 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU57_07795 PF04076 Bacterial OB fold (BOF) protein ISU57_07800 PF06572 Protein of unknown function (DUF1131) ISU57_07805 PF04261 Dyp-type peroxidase family ISU57_07810 PF00701 Dihydrodipicolinate synthetase family ISU57_07815 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU57_07820 PF12468 Type III secretion system leucine rich repeat protein ISU57_07825 PF00480 ROK family ISU57_07830 PF04074 YhcH/YjgK/YiaL ISU57_07835 PF01418 Helix-turn-helix domain, rpiR family ISU57_07835 PF01380 SIS domain ISU57_07840 PF07690 Major Facilitator Superfamily ISU57_07850 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_07855 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_07860 PF00005 ABC transporter ISU57_07865 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_07875 PF00072 Response regulator receiver domain ISU57_07875 PF00486 Transcriptional regulatory protein, C terminal ISU57_07880 PF00672 HAMP domain ISU57_07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_07880 PF00512 His Kinase A (phospho-acceptor) domain ISU57_07890 PF00155 Aminotransferase class I and II ISU57_07900 PF00557 Metallopeptidase family M24 ISU57_07910 PF00474 Sodium:solute symporter family ISU57_07915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU57_07915 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_07920 PF00005 ABC transporter ISU57_07920 PF02687 FtsX-like permease family ISU57_07920 PF12704 MacB-like periplasmic core domain ISU57_07925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_07930 PF00072 Response regulator receiver domain ISU57_07930 PF00486 Transcriptional regulatory protein, C terminal ISU57_07935 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU57_07935 PF00672 HAMP domain ISU57_07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_07935 PF00512 His Kinase A (phospho-acceptor) domain ISU57_07940 PF01797 Transposase IS200 like ISU57_07945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU57_07950 PF02896 PEP-utilising enzyme, TIM barrel domain ISU57_07950 PF05524 PEP-utilising enzyme, N-terminal ISU57_07950 PF00391 PEP-utilising enzyme, mobile domain ISU57_07955 PF00381 PTS HPr component phosphorylation site ISU57_07960 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_07970 PF04354 ZipA, C-terminal FtsZ-binding domain ISU57_07975 PF00533 BRCA1 C Terminus (BRCT) domain ISU57_07975 PF12826 Helix-hairpin-helix motif ISU57_07975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU57_07975 PF03120 NAD-dependent DNA ligase OB-fold domain ISU57_07975 PF01653 NAD-dependent DNA ligase adenylation domain ISU57_07980 PF12843 Putative quorum-sensing-regulated virulence factor ISU57_08005 PF01797 Transposase IS200 like ISU57_08010 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU57_08045 PF07670 Nucleoside recognition ISU57_08045 PF01773 Na+ dependent nucleoside transporter N-terminus ISU57_08045 PF07662 Na+ dependent nucleoside transporter C-terminus ISU57_08050 PF01566 Natural resistance-associated macrophage protein ISU57_08060 PF00248 Aldo/keto reductase family ISU57_08065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_08065 PF03466 LysR substrate binding domain ISU57_08075 PF02685 Glucokinase ISU57_08080 PF07350 Protein of unknown function (DUF1479) ISU57_08085 PF00155 Aminotransferase class I and II ISU57_08090 PF01292 Prokaryotic cytochrome b561 ISU57_08100 PF03783 Curli production assembly/transport component CsgG ISU57_08110 PF05643 Putative bacterial lipoprotein (DUF799) ISU57_08120 PF02613 Nitrate reductase delta subunit ISU57_08125 PF04976 DMSO reductase anchor subunit (DmsC) ISU57_08130 PF13247 4Fe-4S dicluster domain ISU57_08130 PF12800 4Fe-4S binding domain ISU57_08135 PF00384 Molybdopterin oxidoreductase ISU57_08135 PF01568 Molydopterin dinucleotide binding domain ISU57_08135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU57_08145 PF05638 Type VI secretion system effector, Hcp ISU57_08155 PF00005 ABC transporter ISU57_08160 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_08170 PF13406 Transglycosylase SLT domain ISU57_08215 PF05947 Type VI secretion system, TssF ISU57_08220 PF17871 AAA lid domain ISU57_08220 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_08220 PF07724 AAA domain (Cdc48 subfamily) ISU57_08220 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_08225 PF16970 Type-1 fimbrial protein, A ISU57_08235 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_08235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_08240 PF00577 Outer membrane usher protein ISU57_08240 PF13954 PapC N-terminal domain ISU57_08240 PF13953 PapC C-terminal domain ISU57_08245 PF00872 Transposase, Mutator family ISU57_08250 PF13954 PapC N-terminal domain ISU57_08250 PF00577 Outer membrane usher protein ISU57_08250 PF13953 PapC C-terminal domain ISU57_08260 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU57_08265 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU57_08280 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU57_08290 PF00665 Integrase core domain ISU57_08290 PF02796 Helix-turn-helix domain of resolvase ISU57_08295 PF01695 IstB-like ATP binding protein ISU57_08305 PF06761 Intracellular multiplication and human macrophage-killing ISU57_08305 PF14331 ImcF-related N-terminal domain ISU57_08305 PF06744 Type VI secretion protein IcmF C-terminal ISU57_08310 PF06715 Gp5 C-terminal repeat (3 copies) ISU57_08310 PF04717 Type VI secretion system, phage-baseplate injector ISU57_08325 PF07024 ImpE protein ISU57_08340 PF03831 PhnA domain ISU57_08340 PF08274 PhnA Zinc-Ribbon ISU57_08350 PF04011 LemA family ISU57_08365 PF00005 ABC transporter ISU57_08370 PF03379 CcmB protein ISU57_08375 PF01578 Cytochrome C assembly protein ISU57_08380 PF04995 Heme exporter protein D (CcmD) ISU57_08385 PF03100 CcmE ISU57_08390 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU57_08390 PF01578 Cytochrome C assembly protein ISU57_08395 PF08534 Redoxin ISU57_08400 PF03918 Cytochrome C biogenesis protein ISU57_08405 PF03918 Cytochrome C biogenesis protein ISU57_08410 PF04333 MlaA lipoprotein ISU57_08415 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU57_08420 PF04175 Protein of unknown function (DUF406) ISU57_08425 PF02803 Thiolase, C-terminal domain ISU57_08425 PF00108 Thiolase, N-terminal domain ISU57_08430 PF00378 Enoyl-CoA hydratase/isomerase ISU57_08430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU57_08430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU57_08435 PF00300 Histidine phosphatase superfamily (branch 1) ISU57_08440 PF01713 Smr domain ISU57_08445 PF05175 Methyltransferase small domain ISU57_08450 PF01264 Chorismate synthase ISU57_08455 PF03411 Penicillin-insensitive murein endopeptidase ISU57_08460 PF01925 Sulfite exporter TauE/SafE ISU57_08465 PF04315 Elongation factor P hydroxylase ISU57_08470 PF08891 YfcL protein ISU57_08475 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU57_08475 PF01266 FAD dependent oxidoreductase ISU57_08480 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU57_08480 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU57_08485 PF01177 Asp/Glu/Hydantoin racemase ISU57_08490 PF00419 Fimbrial protein ISU57_08500 PF00892 EamA-like transporter family ISU57_08510 PF11890 Domain of unknown function (DUF3410) ISU57_08510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU57_08510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU57_08515 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU57_08515 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU57_08520 PF01416 tRNA pseudouridine synthase ISU57_08525 PF09335 SNARE associated Golgi protein ISU57_08530 PF17848 Acetyl-coA carboxylase zinc finger domain ISU57_08530 PF01039 Carboxyl transferase domain ISU57_08535 PF08245 Mur ligase middle domain ISU57_08535 PF02875 Mur ligase family, glutamate ligase domain ISU57_08540 PF05036 Sporulation related domain ISU57_08545 PF02674 Colicin V production protein ISU57_08550 PF00156 Phosphoribosyl transferase domain ISU57_08555 PF02441 Flavoprotein ISU57_08560 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_08565 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_08570 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_08575 PF00005 ABC transporter ISU57_08580 PF08338 Domain of unknown function (DUF1731) ISU57_08580 PF01370 NAD dependent epimerase/dehydratase family ISU57_08590 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU57_08595 PF00293 NUDIX domain ISU57_08600 PF03611 PTS system sugar-specific permease component ISU57_08610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU57_08615 PF00356 Bacterial regulatory proteins, lacI family ISU57_08615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU57_08620 PF01515 Phosphate acetyl/butaryl transferase ISU57_08620 PF07085 DRTGG domain ISU57_08625 PF00871 Acetokinase family ISU57_08630 PF04217 Protein of unknown function, DUF412 ISU57_08635 PF03887 YfbU domain ISU57_08640 PF13419 Haloacid dehalogenase-like hydrolase ISU57_08645 PF02080 TrkA-C domain ISU57_08645 PF03600 Citrate transporter ISU57_08660 PF00155 Aminotransferase class I and II ISU57_08665 PF03466 LysR substrate binding domain ISU57_08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_08670 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU57_08675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU57_08680 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU57_08680 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU57_08690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU57_08690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU57_08690 PF10531 SLBB domain ISU57_08695 PF00384 Molybdopterin oxidoreductase ISU57_08695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU57_08695 PF01568 Molydopterin dinucleotide binding domain ISU57_08695 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU57_08700 PF00146 NADH dehydrogenase ISU57_08705 PF12838 4Fe-4S dicluster domain ISU57_08710 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU57_08715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU57_08720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU57_08720 PF00361 Proton-conducting membrane transporter ISU57_08725 PF00361 Proton-conducting membrane transporter ISU57_08730 PF00361 Proton-conducting membrane transporter ISU57_08745 PF00106 short chain dehydrogenase ISU57_08750 PF01202 Shikimate kinase ISU57_08765 PF02638 Glycosyl hydrolase-like 10 ISU57_08770 PF00356 Bacterial regulatory proteins, lacI family ISU57_08775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU57_08775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU57_08780 PF07690 Major Facilitator Superfamily ISU57_08785 PF03928 Haem-degrading ISU57_08790 PF00920 Dehydratase family ISU57_08795 PF05957 Bacterial protein of unknown function (DUF883) ISU57_08805 PF00425 chorismate binding enzyme ISU57_08810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU57_08810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU57_08810 PF16582 Middle domain of thiamine pyrophosphate ISU57_08815 PF12697 Alpha/beta hydrolase family ISU57_08820 PF00378 Enoyl-CoA hydratase/isomerase ISU57_08825 PF13378 Enolase C-terminal domain-like ISU57_08835 PF02885 Glycosyl transferase family, helical bundle domain ISU57_08840 PF07338 Protein of unknown function (DUF1471) ISU57_08845 PF05971 RNA methyltransferase ISU57_08855 PF01695 IstB-like ATP binding protein ISU57_08860 PF02796 Helix-turn-helix domain of resolvase ISU57_08860 PF00665 Integrase core domain ISU57_08865 PF08447 PAS fold ISU57_08865 PF13426 PAS domain ISU57_08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU57_08870 PF00005 ABC transporter ISU57_08875 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_08880 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_08890 PF00210 Ferritin-like domain ISU57_08895 PF13649 Methyltransferase domain ISU57_08905 PF00892 EamA-like transporter family ISU57_08910 PF13505 Outer membrane protein beta-barrel domain ISU57_08930 PF00107 Zinc-binding dehydrogenase ISU57_08930 PF08240 Alcohol dehydrogenase GroES-like domain ISU57_08935 PF13407 Periplasmic binding protein domain ISU57_08940 PF00005 ABC transporter ISU57_08945 PF02653 Branched-chain amino acid transport system / permease component ISU57_08950 PF00356 Bacterial regulatory proteins, lacI family ISU57_08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_08955 PF03466 LysR substrate binding domain ISU57_08960 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU57_08970 PF02028 BCCT, betaine/carnitine/choline family transporter ISU57_08980 PF00175 Oxidoreductase NAD-binding domain ISU57_08980 PF00970 Oxidoreductase FAD-binding domain ISU57_08980 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU57_08985 PF08479 POTRA domain, ShlB-type ISU57_08985 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU57_08985 PF17287 POTRA domain ISU57_08990 PF13018 Extended Signal Peptide of Type V secretion system ISU57_08990 PF13332 Hemagglutinin repeat ISU57_08990 PF05860 haemagglutination activity domain ISU57_08990 PF04829 Pre-toxin domain with VENN motif ISU57_09030 PF05594 Haemagluttinin repeat ISU57_09030 PF13332 Hemagglutinin repeat ISU57_09030 PF05860 haemagglutination activity domain ISU57_09030 PF15526 Novel toxin 21 ISU57_09030 PF04829 Pre-toxin domain with VENN motif ISU57_09040 PF17912 MalK OB fold domain ISU57_09040 PF00005 ABC transporter ISU57_09045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU57_09045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU57_09045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU57_09045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU57_09050 PF00356 Bacterial regulatory proteins, lacI family ISU57_09060 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_09065 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_09070 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU57_09095 PF00924 Mechanosensitive ion channel ISU57_09100 PF01867 CRISPR associated protein Cas1 ISU57_09110 PF09611 CRISPR-associated protein (Cas_Csy1) ISU57_09115 PF09614 CRISPR-associated protein (Cas_Csy2) ISU57_09120 PF09615 CRISPR-associated protein (Cas_Csy3) ISU57_09125 PF09618 CRISPR-associated protein (Cas_Csy4) ISU57_09130 PF00248 Aldo/keto reductase family ISU57_09140 PF00083 Sugar (and other) transporter ISU57_09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_09150 PF03466 LysR substrate binding domain ISU57_09155 PF00196 Bacterial regulatory proteins, luxR family ISU57_09155 PF03472 Autoinducer binding domain ISU57_09160 PF00765 Autoinducer synthase ISU57_09175 PF17773 UPF0176 acylphosphatase like domain ISU57_09175 PF00581 Rhodanese-like domain ISU57_09175 PF12368 Rhodanase C-terminal ISU57_09180 PF01594 AI-2E family transporter ISU57_09190 PF00196 Bacterial regulatory proteins, luxR family ISU57_09195 PF01266 FAD dependent oxidoreductase ISU57_09200 PF00872 Transposase, Mutator family ISU57_09210 PF03992 Antibiotic biosynthesis monooxygenase ISU57_09215 PF01979 Amidohydrolase family ISU57_09220 PF06183 DinI-like family ISU57_09225 PF13991 BssS protein family ISU57_09230 PF00872 Transposase, Mutator family ISU57_09235 PF12111 Polyribonucleotide phosphorylase C terminal ISU57_09235 PF00575 S1 RNA binding domain ISU57_09235 PF10150 Ribonuclease E/G family ISU57_09240 PF00849 RNA pseudouridylate synthase ISU57_09240 PF01479 S4 domain ISU57_09245 PF02545 Maf-like protein ISU57_09250 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU57_09255 PF01783 Ribosomal L32p protein family ISU57_09260 PF02504 Fatty acid synthesis protein ISU57_09265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU57_09265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU57_09270 PF00698 Acyl transferase domain ISU57_09280 PF00550 Phosphopantetheine attachment site ISU57_09285 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU57_09285 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU57_09290 PF01797 Transposase IS200 like ISU57_09295 PF01063 Amino-transferase class IV ISU57_09300 PF02618 YceG-like family ISU57_09305 PF02223 Thymidylate kinase ISU57_09310 PF09115 DNA polymerase III, delta subunit, C terminal ISU57_09315 PF01026 TatD related DNase ISU57_09320 PF00367 phosphotransferase system, EIIB ISU57_09320 PF02378 Phosphotransferase system, EIIC ISU57_09325 PF01797 Transposase IS200 like ISU57_09330 PF08501 Shikimate dehydrogenase substrate binding domain ISU57_09335 PF01230 HIT domain ISU57_09340 PF07233 Protein of unknown function (DUF1425) ISU57_09345 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU57_09345 PF13036 Peptidoglycan-synthase activator LpoB ISU57_09350 PF01636 Phosphotransferase enzyme family ISU57_09355 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU57_09360 PF05728 Uncharacterised protein family (UPF0227) ISU57_09365 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_09380 PF00872 Transposase, Mutator family ISU57_09385 PF05433 Glycine zipper 2TM domain ISU57_09390 PF02559 CarD-like/TRCF domain ISU57_09390 PF00271 Helicase conserved C-terminal domain ISU57_09390 PF03461 TRCF domain ISU57_09390 PF17757 UvrB interaction domain ISU57_09390 PF00270 DEAD/DEAH box helicase ISU57_09395 PF02687 FtsX-like permease family ISU57_09395 PF12704 MacB-like periplasmic core domain ISU57_09400 PF00005 ABC transporter ISU57_09405 PF12704 MacB-like periplasmic core domain ISU57_09405 PF02687 FtsX-like permease family ISU57_09410 PF00480 ROK family ISU57_09415 PF00480 ROK family ISU57_09420 PF02146 Sir2 family ISU57_09425 PF07687 Peptidase dimerisation domain ISU57_09425 PF01546 Peptidase family M20/M25/M40 ISU57_09430 PF08007 Cupin superfamily protein ISU57_09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_09435 PF08918 PhoQ Sensor ISU57_09440 PF00486 Transcriptional regulatory protein, C terminal ISU57_09440 PF00072 Response regulator receiver domain ISU57_09450 PF00206 Lyase ISU57_09450 PF08328 Adenylosuccinate lyase C-terminal ISU57_09455 PF04356 Protein of unknown function (DUF489) ISU57_09465 PF00293 NUDIX domain ISU57_09470 PF00849 RNA pseudouridylate synthase ISU57_09475 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU57_09480 PF00356 Bacterial regulatory proteins, lacI family ISU57_09480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU57_09490 PF08447 PAS fold ISU57_09490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU57_09495 PF05368 NmrA-like family ISU57_09500 PF01638 HxlR-like helix-turn-helix ISU57_09510 PF00328 Histidine phosphatase superfamily (branch 2) ISU57_09515 PF14001 YdfZ protein ISU57_09525 PF01037 Lrp/AsnC ligand binding domain ISU57_09525 PF13404 AsnC-type helix-turn-helix domain ISU57_09535 PF10777 Inner membrane protein YlaC ISU57_09540 PF00550 Phosphopantetheine attachment site ISU57_09540 PF14765 Polyketide synthase dehydratase ISU57_09540 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU57_09540 PF08659 KR domain ISU57_09540 PF16197 Ketoacyl-synthetase C-terminal extension ISU57_09540 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU57_09540 PF08240 Alcohol dehydrogenase GroES-like domain ISU57_09540 PF00698 Acyl transferase domain ISU57_09540 PF00107 Zinc-binding dehydrogenase ISU57_09545 PF02929 Beta galactosidase small chain ISU57_09545 PF00703 Glycosyl hydrolases family 2 ISU57_09545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU57_09545 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU57_09545 PF16353 Domain of unknown function(DUF4981) ISU57_09550 PF00313 'Cold-shock' DNA-binding domain ISU57_09555 PF10781 Dextransucrase DSRB ISU57_09565 PF02308 MgtC family ISU57_09570 PF00690 Cation transporter/ATPase, N-terminus ISU57_09570 PF00689 Cation transporting ATPase, C-terminus ISU57_09580 PF05280 Flagellar transcriptional activator (FlhC) ISU57_09585 PF01618 MotA/TolQ/ExbB proton channel family ISU57_09590 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU57_09590 PF00691 OmpA family ISU57_09595 PF01584 CheW-like domain ISU57_09595 PF09078 CheY binding ISU57_09595 PF02895 Signal transducing histidine kinase, homodimeric domain ISU57_09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_09595 PF01627 Hpt domain ISU57_09600 PF01584 CheW-like domain ISU57_09605 PF07690 Major Facilitator Superfamily ISU57_09610 PF01042 Endoribonuclease L-PSP ISU57_09620 PF13309 HTH domain ISU57_09620 PF08348 YheO-like PAS domain ISU57_09625 PF12951 Passenger-associated-transport-repeat ISU57_09640 PF00672 HAMP domain ISU57_09640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU57_09640 PF02203 Tar ligand binding domain homologue ISU57_09645 PF00672 HAMP domain ISU57_09645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU57_09645 PF02203 Tar ligand binding domain homologue ISU57_09650 PF01739 CheR methyltransferase, SAM binding domain ISU57_09650 PF03705 CheR methyltransferase, all-alpha domain ISU57_09655 PF01339 CheB methylesterase ISU57_09655 PF00072 Response regulator receiver domain ISU57_09660 PF00072 Response regulator receiver domain ISU57_09665 PF04344 Chemotaxis phosphatase, CheZ ISU57_09670 PF01510 N-acetylmuramoyl-L-alanine amidase ISU57_09675 PF03895 YadA-like membrane anchor domain ISU57_09675 PF05658 Head domain of trimeric autotransporter adhesin ISU57_09675 PF13018 Extended Signal Peptide of Type V secretion system ISU57_09675 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU57_09680 PF13018 Extended Signal Peptide of Type V secretion system ISU57_09680 PF03895 YadA-like membrane anchor domain ISU57_09680 PF05658 Head domain of trimeric autotransporter adhesin ISU57_09680 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU57_09690 PF00842 Alanine racemase, C-terminal domain ISU57_09690 PF01168 Alanine racemase, N-terminal domain ISU57_09715 PF01695 IstB-like ATP binding protein ISU57_09720 PF00665 Integrase core domain ISU57_09720 PF02796 Helix-turn-helix domain of resolvase ISU57_09730 PF07351 Protein of unknown function (DUF1480) ISU57_09745 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_09745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_09765 PF02470 MlaD protein ISU57_09770 PF04403 Paraquat-inducible protein A ISU57_09775 PF13185 GAF domain ISU57_09780 PF04352 ProQ/FINO family ISU57_09780 PF17516 ProQ C-terminal domain ISU57_09785 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU57_09785 PF00595 PDZ domain ISU57_09785 PF03572 Peptidase family S41 ISU57_09785 PF17804 Tail specific protease N-terminal domain ISU57_09790 PF01435 Peptidase family M48 ISU57_09795 PF00419 Fimbrial protein ISU57_09800 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_09800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_09805 PF13953 PapC C-terminal domain ISU57_09805 PF13954 PapC N-terminal domain ISU57_09805 PF00577 Outer membrane usher protein ISU57_09815 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_09815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_09820 PF07690 Major Facilitator Superfamily ISU57_09825 PF14583 Oligogalacturonate lyase ISU57_09830 PF09339 IclR helix-turn-helix domain ISU57_09830 PF01614 Bacterial transcriptional regulator ISU57_09835 PF01510 N-acetylmuramoyl-L-alanine amidase ISU57_09840 PF00375 Sodium:dicarboxylate symporter family ISU57_09845 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU57_09850 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU57_09855 PF01547 Bacterial extracellular solute-binding protein ISU57_09860 PF00005 ABC transporter ISU57_09860 PF03459 TOBE domain ISU57_09860 PF17912 MalK OB fold domain ISU57_09865 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_09870 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_09875 PF06917 Periplasmic pectate lyase ISU57_09885 PF04962 KduI/IolB family ISU57_09890 PF07883 Cupin domain ISU57_09895 PF00872 Transposase, Mutator family ISU57_09915 PF08242 Methyltransferase domain ISU57_09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_09960 PF00512 His Kinase A (phospho-acceptor) domain ISU57_09960 PF00672 HAMP domain ISU57_09965 PF00072 Response regulator receiver domain ISU57_09965 PF00486 Transcriptional regulatory protein, C terminal ISU57_09970 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU57_10010 PF01926 50S ribosome-binding GTPase ISU57_10010 PF06071 Protein of unknown function (DUF933) ISU57_10015 PF01195 Peptidyl-tRNA hydrolase ISU57_10020 PF10762 Protein of unknown function (DUF2583) ISU57_10025 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU57_10025 PF14572 Phosphoribosyl synthetase-associated domain ISU57_10030 PF00288 GHMP kinases N terminal domain ISU57_10030 PF08544 GHMP kinases C terminal ISU57_10035 PF03550 Outer membrane lipoprotein LolB ISU57_10040 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU57_10040 PF01488 Shikimate / quinate 5-dehydrogenase ISU57_10040 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU57_10045 PF00472 RF-1 domain ISU57_10045 PF03462 PCRF domain ISU57_10050 PF17827 PrmC N-terminal domain ISU57_10050 PF13847 Methyltransferase domain ISU57_10055 PF04247 Invasion gene expression up-regulator, SirB ISU57_10060 PF13369 Transglutaminase-like superfamily ISU57_10065 PF00793 DAHP synthetase I family ISU57_10070 PF01740 STAS domain ISU57_10070 PF00916 Sulfate permease family ISU57_10080 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU57_10090 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_10095 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_10100 PF00005 ABC transporter ISU57_10100 PF08402 TOBE domain ISU57_10105 PF01797 Transposase IS200 like ISU57_10115 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU57_10120 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU57_10120 PF00480 ROK family ISU57_10130 PF02811 PHP domain ISU57_10135 PF02613 Nitrate reductase delta subunit ISU57_10140 PF07273 Protein of unknown function (DUF1439) ISU57_10145 PF07690 Major Facilitator Superfamily ISU57_10150 PF13302 Acetyltransferase (GNAT) domain ISU57_10155 PF04337 Protein of unknown function, DUF480 ISU57_10160 PF03023 Lipid II flippase MurJ ISU57_10165 PF08479 POTRA domain, ShlB-type ISU57_10165 PF17287 POTRA domain ISU57_10165 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU57_10170 PF05860 haemagglutination activity domain ISU57_10170 PF13332 Hemagglutinin repeat ISU57_10175 PF05746 DALR anticodon binding domain ISU57_10175 PF00750 tRNA synthetases class I (R) ISU57_10175 PF03485 Arginyl tRNA synthetase N terminal domain ISU57_10180 PF06185 YecM protein ISU57_10185 PF03932 CutC family ISU57_10190 PF08003 Protein of unknown function (DUF1698) ISU57_10195 PF13649 Methyltransferase domain ISU57_10200 PF01124 MAPEG family ISU57_10205 PF01904 Protein of unknown function DUF72 ISU57_10210 PF02938 GAD domain ISU57_10210 PF01336 OB-fold nucleic acid binding domain ISU57_10210 PF00152 tRNA synthetases class II (D, K and N) ISU57_10215 PF00293 NUDIX domain ISU57_10220 PF01709 Transcriptional regulator ISU57_10225 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU57_10230 PF01330 RuvA N terminal domain ISU57_10230 PF07499 RuvA, C-terminal domain ISU57_10235 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU57_10235 PF17864 RuvB AAA lid domain ISU57_10235 PF05491 RuvB C-terminal winged helix domain ISU57_10240 PF00950 ABC 3 transport family ISU57_10245 PF00005 ABC transporter ISU57_10250 PF01297 Zinc-uptake complex component A periplasmic ISU57_10255 PF01551 Peptidase family M23 ISU57_10255 PF08525 Opacity-associated protein A N-terminal motif ISU57_10255 PF01476 LysM domain ISU57_10260 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU57_10270 PF00224 Pyruvate kinase, barrel domain ISU57_10270 PF02887 Pyruvate kinase, alpha/beta domain ISU57_10275 PF01418 Helix-turn-helix domain, rpiR family ISU57_10275 PF01380 SIS domain ISU57_10280 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU57_10280 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU57_10285 PF01081 KDPG and KHG aldolase ISU57_10290 PF00893 Small Multidrug Resistance protein ISU57_10295 PF00893 Small Multidrug Resistance protein ISU57_10300 PF01042 Endoribonuclease L-PSP ISU57_10305 PF04851 Type III restriction enzyme, res subunit ISU57_10305 PF13307 Helicase C-terminal domain ISU57_10310 PF00814 Glycoprotease family ISU57_10315 PF03843 Outer membrane lipoprotein Slp family ISU57_10325 PF00501 AMP-binding enzyme ISU57_10325 PF13193 AMP-binding enzyme C-terminal domain ISU57_10330 PF00570 HRDC domain ISU57_10330 PF01612 3'-5' exonuclease ISU57_10335 PF03776 Septum formation topological specificity factor MinE ISU57_10340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU57_10345 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU57_10345 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU57_10350 PF05166 YcgL domain ISU57_10355 PF13406 Transglycosylase SLT domain ISU57_10360 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU57_10365 PF03692 Putative zinc- or iron-chelating domain ISU57_10370 PF00589 Phage integrase family ISU57_10370 PF12167 Arm DNA-binding domain ISU57_10375 PF00665 Integrase core domain ISU57_10375 PF02796 Helix-turn-helix domain of resolvase ISU57_10380 PF01695 IstB-like ATP binding protein ISU57_10395 PF05772 NinB protein ISU57_10405 PF06530 Phage antitermination protein Q ISU57_10470 PF00872 Transposase, Mutator family ISU57_10625 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU57_10630 PF00872 Transposase, Mutator family ISU57_10640 PF00266 Aminotransferase class-V ISU57_10655 PF02600 Disulfide bond formation protein DsbB ISU57_10665 PF07840 FadR C-terminal domain ISU57_10665 PF00392 Bacterial regulatory proteins, gntR family ISU57_10670 PF04293 SpoVR like protein ISU57_10675 PF01266 FAD dependent oxidoreductase ISU57_10680 PF07690 Major Facilitator Superfamily ISU57_10685 PF02678 Pirin ISU57_10685 PF05726 Pirin C-terminal cupin domain ISU57_10690 PF03466 LysR substrate binding domain ISU57_10690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_10700 PF04285 Protein of unknown function (DUF444) ISU57_10705 PF08298 PrkA AAA domain ISU57_10705 PF06798 PrkA serine protein kinase C-terminal domain ISU57_10710 PF06629 MltA-interacting protein MipA ISU57_10715 PF01263 Aldose 1-epimerase ISU57_10720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU57_10720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU57_10725 PF01641 SelR domain ISU57_10730 PF07023 Protein of unknown function (DUF1315) ISU57_10735 PF00857 Isochorismatase family ISU57_10740 PF00710 Asparaginase, N-terminal ISU57_10740 PF17763 Glutaminase/Asparaginase C-terminal domain ISU57_10745 PF01343 Peptidase family S49 ISU57_10750 PF00881 Nitroreductase family ISU57_10755 PF00586 AIR synthase related protein, N-terminal domain ISU57_10755 PF02769 AIR synthase related protein, C-terminal domain ISU57_10760 PF01131 DNA topoisomerase ISU57_10760 PF01751 Toprim domain ISU57_10765 PF07383 Protein of unknown function (DUF1496) ISU57_10770 PF00293 NUDIX domain ISU57_10775 PF03372 Endonuclease/Exonuclease/phosphatase family ISU57_10780 PF03466 LysR substrate binding domain ISU57_10780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_10800 PF00872 Transposase, Mutator family ISU57_10805 PF00551 Formyl transferase ISU57_10805 PF01842 ACT domain ISU57_10810 PF02810 SEC-C motif ISU57_10815 PF00072 Response regulator receiver domain ISU57_10820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU57_10820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU57_10820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU57_10825 PF00816 H-NS histone family ISU57_10830 PF00265 Thymidine kinase ISU57_10835 PF01695 IstB-like ATP binding protein ISU57_10840 PF02796 Helix-turn-helix domain of resolvase ISU57_10840 PF00665 Integrase core domain ISU57_10845 PF01797 Transposase IS200 like ISU57_10850 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU57_10855 PF00512 His Kinase A (phospho-acceptor) domain ISU57_10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_10855 PF00672 HAMP domain ISU57_10860 PF00072 Response regulator receiver domain ISU57_10860 PF00486 Transcriptional regulatory protein, C terminal ISU57_10870 PF13520 Amino acid permease ISU57_10875 PF07338 Protein of unknown function (DUF1471) ISU57_10880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU57_10880 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU57_10880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU57_10885 PF02233 NAD(P) transhydrogenase beta subunit ISU57_10890 PF00582 Universal stress protein family ISU57_10895 PF13545 Crp-like helix-turn-helix domain ISU57_10895 PF00027 Cyclic nucleotide-binding domain ISU57_10900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU57_10900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU57_10905 PF00245 Alkaline phosphatase ISU57_10915 PF13419 Haloacid dehalogenase-like hydrolase ISU57_10920 PF01842 ACT domain ISU57_10925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU57_10925 PF00205 Thiamine pyrophosphate enzyme, central domain ISU57_10925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU57_10955 PF01048 Phosphorylase superfamily ISU57_10955 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU57_10960 PF00005 ABC transporter ISU57_10965 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_10970 PF09084 NMT1/THI5 like ISU57_10985 PF00356 Bacterial regulatory proteins, lacI family ISU57_10990 PF00654 Voltage gated chloride channel ISU57_11000 PF00480 ROK family ISU57_11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_11005 PF03466 LysR substrate binding domain ISU57_11010 PF07690 Major Facilitator Superfamily ISU57_11015 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU57_11020 PF10415 Fumarase C C-terminus ISU57_11020 PF00206 Lyase ISU57_11025 PF01238 Phosphomannose isomerase type I ISU57_11030 PF06097 Bacterial protein of unknown function (DUF945) ISU57_11040 PF13593 SBF-like CPA transporter family (DUF4137) ISU57_11045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU57_11045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU57_11050 PF12833 Helix-turn-helix domain ISU57_11050 PF02311 AraC-like ligand binding domain ISU57_11055 PF02653 Branched-chain amino acid transport system / permease component ISU57_11060 PF00005 ABC transporter ISU57_11065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU57_11070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_11075 PF02610 L-arabinose isomerase ISU57_11075 PF11762 L-arabinose isomerase C-terminal domain ISU57_11080 PF03412 Peptidase C39 family ISU57_11080 PF00005 ABC transporter ISU57_11080 PF00664 ABC transporter transmembrane region ISU57_11090 PF13533 Biotin-lipoyl like ISU57_11095 PF03412 Peptidase C39 family ISU57_11095 PF00005 ABC transporter ISU57_11095 PF00664 ABC transporter transmembrane region ISU57_11100 PF03412 Peptidase C39 family ISU57_11100 PF00664 ABC transporter transmembrane region ISU57_11100 PF00005 ABC transporter ISU57_11110 PF10754 Protein of unknown function (DUF2569) ISU57_11115 PF02508 Rnf-Nqr subunit, membrane protein ISU57_11120 PF04060 Putative Fe-S cluster ISU57_11125 PF10531 SLBB domain ISU57_11125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU57_11125 PF13237 4Fe-4S dicluster domain ISU57_11125 PF13375 RnfC Barrel sandwich hybrid domain ISU57_11130 PF06445 GyrI-like small molecule binding domain ISU57_11130 PF12833 Helix-turn-helix domain ISU57_11135 PF03116 NQR2, RnfD, RnfE family ISU57_11140 PF04205 FMN-binding domain ISU57_11145 PF02508 Rnf-Nqr subunit, membrane protein ISU57_11150 PF00633 Helix-hairpin-helix motif ISU57_11150 PF10576 Iron-sulfur binding domain of endonuclease III ISU57_11150 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU57_11155 PF01370 NAD dependent epimerase/dehydratase family ISU57_11160 PF07690 Major Facilitator Superfamily ISU57_11165 PF08206 Ribonuclease B OB domain ISU57_11165 PF00773 RNB domain ISU57_11165 PF17876 Cold shock domain ISU57_11165 PF00575 S1 RNA binding domain ISU57_11170 PF13722 5TM C-terminal transporter carbon starvation CstA ISU57_11170 PF02554 Carbon starvation protein CstA ISU57_11175 PF04328 Selenoprotein, putative ISU57_11180 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU57_11190 PF00596 Class II Aldolase and Adducin N-terminal domain ISU57_11195 PF05433 Glycine zipper 2TM domain ISU57_11200 PF01253 Translation initiation factor SUI1 ISU57_11205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU57_11215 PF18073 Rubredoxin metal binding domain ISU57_11220 PF06305 Lipopolysaccharide assembly protein A domain ISU57_11225 PF01569 PAP2 superfamily ISU57_11230 PF00925 GTP cyclohydrolase II ISU57_11235 PF00330 Aconitase family (aconitate hydratase) ISU57_11235 PF00694 Aconitase C-terminal domain ISU57_11245 PF03466 LysR substrate binding domain ISU57_11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_11250 PF01396 Topoisomerase DNA binding C4 zinc finger ISU57_11250 PF01751 Toprim domain ISU57_11250 PF08272 Topoisomerase I zinc-ribbon-like ISU57_11250 PF01131 DNA topoisomerase ISU57_11260 PF10692 Protein of unknown function (DUF2498) ISU57_11265 PF08496 Peptidase family S49 N-terminal ISU57_11265 PF01343 Peptidase family S49 ISU57_11270 PF00106 short chain dehydrogenase ISU57_11275 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU57_11280 PF00849 RNA pseudouridylate synthase ISU57_11280 PF01479 S4 domain ISU57_11285 PF01300 Telomere recombination ISU57_11290 PF02811 PHP domain ISU57_11300 PF00425 chorismate binding enzyme ISU57_11300 PF04715 Anthranilate synthase component I, N terminal region ISU57_11305 PF00117 Glutamine amidotransferase class-I ISU57_11310 PF02885 Glycosyl transferase family, helical bundle domain ISU57_11310 PF00591 Glycosyl transferase family, a/b domain ISU57_11315 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU57_11315 PF00218 Indole-3-glycerol phosphate synthase ISU57_11320 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_11325 PF00290 Tryptophan synthase alpha chain ISU57_11335 PF03922 OmpW family ISU57_11360 PF04279 Intracellular septation protein A ISU57_11365 PF03061 Thioesterase superfamily ISU57_11370 PF00872 Transposase, Mutator family ISU57_11375 PF03544 Gram-negative bacterial TonB protein C-terminal ISU57_11380 PF03795 YCII-related domain ISU57_11395 PF13505 Outer membrane protein beta-barrel domain ISU57_11410 PF13396 Phospholipase_D-nuclease N-terminal ISU57_11410 PF13091 PLD-like domain ISU57_11415 PF04269 Protein of unknown function, DUF440 ISU57_11425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_11425 PF00005 ABC transporter ISU57_11430 PF00005 ABC transporter ISU57_11430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_11435 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU57_11435 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_11440 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_11445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_11450 PF01914 MarC family integral membrane protein ISU57_11455 PF00171 Aldehyde dehydrogenase family ISU57_11455 PF00465 Iron-containing alcohol dehydrogenase ISU57_11460 PF00665 Integrase core domain ISU57_11460 PF02796 Helix-turn-helix domain of resolvase ISU57_11465 PF01695 IstB-like ATP binding protein ISU57_11495 PF00089 Trypsin ISU57_11510 PF04408 Helicase associated domain (HA2) ISU57_11510 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU57_11510 PF00271 Helicase conserved C-terminal domain ISU57_11510 PF11898 Domain of unknown function (DUF3418) ISU57_11510 PF00270 DEAD/DEAH box helicase ISU57_11515 PF02525 Flavodoxin-like fold ISU57_11520 PF04198 Putative sugar-binding domain ISU57_11520 PF00325 Bacterial regulatory proteins, crp family ISU57_11525 PF08125 Mannitol dehydrogenase C-terminal domain ISU57_11525 PF01232 Mannitol dehydrogenase Rossmann domain ISU57_11530 PF07027 Protein of unknown function (DUF1318) ISU57_11535 PF13617 YnbE-like lipoprotein ISU57_11540 PF11739 Dicarboxylate transport ISU57_11545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU57_11545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU57_11550 PF03724 META domain ISU57_11555 PF03891 Domain of unknown function (DUF333) ISU57_11560 PF02308 MgtC family ISU57_11565 PF00893 Small Multidrug Resistance protein ISU57_11570 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU57_11570 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU57_11570 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU57_11570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU57_11570 PF10371 Domain of unknown function ISU57_11575 PF01171 PP-loop family ISU57_11580 PF07859 alpha/beta hydrolase fold ISU57_11590 PF01544 CorA-like Mg2+ transporter protein ISU57_11595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_11600 PF00246 Zinc carboxypeptidase ISU57_11605 PF13378 Enolase C-terminal domain-like ISU57_11605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU57_11610 PF08534 Redoxin ISU57_11615 PF01797 Transposase IS200 like ISU57_11620 PF18024 Helix-turn-helix domain ISU57_11620 PF00158 Sigma-54 interaction domain ISU57_11625 PF09722 Protein of unknown function (DUF2384) ISU57_11630 PF08808 RES domain ISU57_11635 PF05128 Domain of unknown function (DUF697) ISU57_11640 PF04317 YcjX-like family, DUF463 ISU57_11650 PF04024 PspC domain ISU57_11655 PF06667 Phage shock protein B ISU57_11660 PF04012 PspA/IM30 family ISU57_11665 PF02954 Bacterial regulatory protein, Fis family ISU57_11665 PF00158 Sigma-54 interaction domain ISU57_11670 PF01797 Transposase IS200 like ISU57_11675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_11680 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_11685 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU57_11685 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_11690 PF00005 ABC transporter ISU57_11690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_11695 PF00005 ABC transporter ISU57_11705 PF00854 POT family ISU57_11710 PF04893 Yip1 domain ISU57_11715 PF11656 YjbD family (DUF3811) ISU57_11720 PF00043 Glutathione S-transferase, C-terminal domain ISU57_11720 PF02798 Glutathione S-transferase, N-terminal domain ISU57_11725 PF08543 Phosphomethylpyrimidine kinase ISU57_11730 PF01479 S4 domain ISU57_11730 PF00579 tRNA synthetases class I (W and Y) ISU57_11735 PF01243 Pyridoxamine 5'-phosphate oxidase ISU57_11735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU57_11740 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU57_11745 PF03702 Anhydro-N-acetylmuramic acid kinase ISU57_11750 PF05433 Glycine zipper 2TM domain ISU57_11755 PF01047 MarR family ISU57_11760 PF00884 Sulfatase ISU57_11760 PF08019 Phosphoethanolamine transferase EptA/EptB ISU57_11765 PF00440 Bacterial regulatory proteins, tetR family ISU57_11765 PF16925 Tetracyclin repressor-like, C-terminal domain ISU57_11775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU57_11780 PF00929 Exonuclease ISU57_11790 PF00462 Glutaredoxin ISU57_11795 PF00877 NlpC/P60 family ISU57_11800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU57_11800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU57_11810 PF00356 Bacterial regulatory proteins, lacI family ISU57_11815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_11815 PF03466 LysR substrate binding domain ISU57_11820 PF07690 Major Facilitator Superfamily ISU57_11830 PF00677 Lumazine binding domain ISU57_11840 PF01554 MatE ISU57_11855 PF00224 Pyruvate kinase, barrel domain ISU57_11855 PF02887 Pyruvate kinase, alpha/beta domain ISU57_11860 PF04728 Lipoprotein leucine-zipper ISU57_11865 PF01797 Transposase IS200 like ISU57_11870 PF00665 Integrase core domain ISU57_11870 PF02796 Helix-turn-helix domain of resolvase ISU57_11875 PF01695 IstB-like ATP binding protein ISU57_11885 PF01476 LysM domain ISU57_11885 PF17969 L,D-transpeptidase C-terminal domain ISU57_11885 PF03734 L,D-transpeptidase catalytic domain ISU57_11890 PF02657 Fe-S metabolism associated domain ISU57_11895 PF00266 Aminotransferase class-V ISU57_11900 PF01458 Uncharacterized protein family (UPF0051) ISU57_11905 PF00005 ABC transporter ISU57_11910 PF01458 Uncharacterized protein family (UPF0051) ISU57_11915 PF01521 Iron-sulphur cluster biosynthesis ISU57_11920 PF03061 Thioesterase superfamily ISU57_11925 PF13183 4Fe-4S dicluster domain ISU57_11925 PF01565 FAD binding domain ISU57_11925 PF02913 FAD linked oxidases, C-terminal domain ISU57_11930 PF01594 AI-2E family transporter ISU57_11940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU57_11940 PF02896 PEP-utilising enzyme, TIM barrel domain ISU57_11940 PF00391 PEP-utilising enzyme, mobile domain ISU57_11945 PF03618 Kinase/pyrophosphorylase ISU57_11950 PF00793 DAHP synthetase I family ISU57_11960 PF10437 Bacterial lipoate protein ligase C-terminus ISU57_11960 PF03099 Biotin/lipoate A/B protein ligase family ISU57_11965 PF00877 NlpC/P60 family ISU57_11980 PF00892 EamA-like transporter family ISU57_11985 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU57_11990 PF01522 Polysaccharide deacetylase ISU57_11995 PF01370 NAD dependent epimerase/dehydratase family ISU57_11995 PF02911 Formyl transferase, C-terminal domain ISU57_11995 PF00551 Formyl transferase ISU57_12000 PF00535 Glycosyl transferase family 2 ISU57_12005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU57_12010 PF00005 ABC transporter ISU57_12015 PF00255 Glutathione peroxidase ISU57_12020 PF01032 FecCD transport family ISU57_12030 PF00216 Bacterial DNA-binding protein ISU57_12035 PF03484 tRNA synthetase B5 domain ISU57_12035 PF03147 Ferredoxin-fold anticodon binding domain ISU57_12035 PF01588 Putative tRNA binding domain ISU57_12035 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU57_12035 PF03483 B3/4 domain ISU57_12040 PF01409 tRNA synthetases class II core domain (F) ISU57_12040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU57_12050 PF00453 Ribosomal protein L20 ISU57_12055 PF01632 Ribosomal protein L35 ISU57_12060 PF05198 Translation initiation factor IF-3, N-terminal domain ISU57_12060 PF00707 Translation initiation factor IF-3, C-terminal domain ISU57_12065 PF03129 Anticodon binding domain ISU57_12065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU57_12065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU57_12065 PF02824 TGS domain ISU57_12070 PF13619 KTSC domain ISU57_12080 PF01914 MarC family integral membrane protein ISU57_12085 PF01464 Transglycosylase SLT domain ISU57_12090 PF01297 Zinc-uptake complex component A periplasmic ISU57_12095 PF00005 ABC transporter ISU57_12100 PF00950 ABC 3 transport family ISU57_12105 PF00950 ABC 3 transport family ISU57_12115 PF03881 Fructosamine kinase ISU57_12120 PF14002 YniB-like protein ISU57_12125 PF13419 Haloacid dehalogenase-like hydrolase ISU57_12130 PF00872 Transposase, Mutator family ISU57_12175 PF01370 NAD dependent epimerase/dehydratase family ISU57_12180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU57_12180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU57_12185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU57_12185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU57_12195 PF05962 HutD ISU57_12200 PF01979 Amidohydrolase family ISU57_12205 PF07702 UTRA domain ISU57_12205 PF00392 Bacterial regulatory proteins, gntR family ISU57_12210 PF01979 Amidohydrolase family ISU57_12225 PF01695 IstB-like ATP binding protein ISU57_12230 PF02796 Helix-turn-helix domain of resolvase ISU57_12230 PF00665 Integrase core domain ISU57_12250 PF08402 TOBE domain ISU57_12250 PF00005 ABC transporter ISU57_12255 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_12260 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_12270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU57_12270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU57_12275 PF07702 UTRA domain ISU57_12275 PF00392 Bacterial regulatory proteins, gntR family ISU57_12345 PF05638 Type VI secretion system effector, Hcp ISU57_12390 PF01066 CDP-alcohol phosphatidyltransferase ISU57_12395 PF01541 GIY-YIG catalytic domain ISU57_12395 PF02151 UvrB/uvrC motif ISU57_12395 PF08459 UvrC Helix-hairpin-helix N-terminal ISU57_12400 PF00196 Bacterial regulatory proteins, luxR family ISU57_12400 PF00072 Response regulator receiver domain ISU57_12405 PF10769 Protein of unknown function (DUF2594) ISU57_12410 PF06942 GlpM protein ISU57_12420 PF13505 Outer membrane protein beta-barrel domain ISU57_12430 PF00324 Amino acid permease ISU57_12435 PF01344 Kelch motif ISU57_12440 PF03358 NADPH-dependent FMN reductase ISU57_12445 PF04261 Dyp-type peroxidase family ISU57_12450 PF13473 Cupredoxin-like domain ISU57_12450 PF09375 Imelysin ISU57_12455 PF03239 Iron permease FTR1 family ISU57_12460 PF00474 Sodium:solute symporter family ISU57_12470 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU57_12470 PF01619 Proline dehydrogenase ISU57_12470 PF14850 DNA-binding domain of Proline dehydrogenase ISU57_12470 PF00171 Aldehyde dehydrogenase family ISU57_12485 PF00005 ABC transporter ISU57_12490 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_12495 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_12500 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_12505 PF02899 Phage integrase, N-terminal SAM-like domain ISU57_12510 PF04545 Sigma-70, region 4 ISU57_12510 PF04539 Sigma-70 region 3 ISU57_12510 PF04542 Sigma-70 region 2 ISU57_12515 PF00669 Bacterial flagellin N-terminal helical region ISU57_12515 PF00700 Bacterial flagellin C-terminal helical region ISU57_12515 PF08884 Flagellin D3 domain ISU57_12520 PF07196 Flagellin hook IN motif ISU57_12520 PF07195 Flagellar hook-associated protein 2 C-terminus ISU57_12520 PF02465 Flagellar hook-associated protein 2 N-terminus ISU57_12525 PF02561 Flagellar protein FliS ISU57_12530 PF05400 Flagellar protein FliT ISU57_12535 PF12833 Helix-turn-helix domain ISU57_12540 PF02743 Cache domain ISU57_12540 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU57_12540 PF00672 HAMP domain ISU57_12545 PF01966 HD domain ISU57_12550 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU57_12570 PF02049 Flagellar hook-basal body complex protein FliE ISU57_12575 PF01514 Secretory protein of YscJ/FliF family ISU57_12575 PF08345 Flagellar M-ring protein C-terminal ISU57_12580 PF14841 FliG middle domain ISU57_12580 PF01706 FliG C-terminal domain ISU57_12580 PF14842 FliG N-terminal domain ISU57_12585 PF02108 Flagellar assembly protein FliH ISU57_12590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU57_12590 PF18269 T3SS EscN ATPase C-terminal domain ISU57_12595 PF02050 Flagellar FliJ protein ISU57_12600 PF02120 Flagellar hook-length control protein FliK ISU57_12605 PF03748 Flagellar basal body-associated protein FliL ISU57_12610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU57_12610 PF02154 Flagellar motor switch protein FliM ISU57_12615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU57_12615 PF16973 Flagellar motor switch protein FliN N-terminal ISU57_12620 PF04347 Flagellar biosynthesis protein, FliO ISU57_12625 PF00813 FliP family ISU57_12630 PF01313 Bacterial export proteins, family 3 ISU57_12635 PF01311 Bacterial export proteins, family 1 ISU57_12650 PF00294 pfkB family carbohydrate kinase ISU57_12655 PF02653 Branched-chain amino acid transport system / permease component ISU57_12660 PF00005 ABC transporter ISU57_12665 PF13407 Periplasmic binding protein domain ISU57_12670 PF02653 Branched-chain amino acid transport system / permease component ISU57_12675 PF00596 Class II Aldolase and Adducin N-terminal domain ISU57_12680 PF04198 Putative sugar-binding domain ISU57_12685 PF00669 Bacterial flagellin N-terminal helical region ISU57_12690 PF00460 Flagella basal body rod protein ISU57_12690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_12695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU57_12695 PF10135 Rod binding protein ISU57_12700 PF02119 Flagellar P-ring protein ISU57_12705 PF02107 Flagellar L-ring protein ISU57_12720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_12720 PF00460 Flagella basal body rod protein ISU57_12720 PF07559 Flagellar basal body protein FlaE ISU57_12725 PF13861 FlgD Tudor-like domain ISU57_12725 PF13860 FlgD Ig-like domain ISU57_12725 PF03963 Flagellar hook capping protein - N-terminal region ISU57_12730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU57_12730 PF00460 Flagella basal body rod protein ISU57_12735 PF00460 Flagella basal body rod protein ISU57_12740 PF17656 FlgA N-terminal domain ISU57_12740 PF13144 Chaperone for flagella basal body P-ring formation ISU57_12745 PF04316 Anti-sigma-28 factor, FlgM ISU57_12750 PF05130 FlgN protein ISU57_12760 PF01797 Transposase IS200 like ISU57_12770 PF06366 Flagellar protein FlhE ISU57_12775 PF00771 FHIPEP family ISU57_12780 PF01312 FlhB HrpN YscU SpaS Family ISU57_12795 PF10709 Protein of unknown function (DUF2511) ISU57_12805 PF04234 CopC domain ISU57_12810 PF00210 Ferritin-like domain ISU57_12815 PF06440 DNA polymerase III, theta subunit ISU57_12820 PF00561 alpha/beta hydrolase fold ISU57_12825 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU57_12825 PF00326 Prolyl oligopeptidase family ISU57_12830 PF13995 YebF-like protein ISU57_12835 PF04266 ASCH domain ISU57_12840 PF07130 YebG protein ISU57_12845 PF00271 Helicase conserved C-terminal domain ISU57_12845 PF03880 DbpA RNA binding domain ISU57_12845 PF00270 DEAD/DEAH box helicase ISU57_12850 PF02222 ATP-grasp domain ISU57_12855 PF03701 Uncharacterised protein family (UPF0181) ISU57_12860 PF00425 chorismate binding enzyme ISU57_12860 PF04715 Anthranilate synthase component I, N terminal region ISU57_12865 PF00293 NUDIX domain ISU57_12870 PF03315 Serine dehydratase beta chain ISU57_12870 PF03313 Serine dehydratase alpha chain ISU57_12875 PF01613 Flavin reductase like domain ISU57_12880 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU57_12880 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU57_12885 PF07690 Major Facilitator Superfamily ISU57_12890 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU57_12895 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU57_12900 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU57_12905 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU57_12910 PF00171 Aldehyde dehydrogenase family ISU57_12915 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU57_12920 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU57_12925 PF01047 MarR family ISU57_12930 PF03741 Integral membrane protein TerC family ISU57_12930 PF03471 Transporter associated domain ISU57_12935 PF03830 PTS system sorbose subfamily IIB component ISU57_12935 PF03610 PTS system fructose IIA component ISU57_12940 PF03609 PTS system sorbose-specific iic component ISU57_12945 PF03613 PTS system mannose/fructose/sorbose family IID component ISU57_12950 PF06173 Protein of unknown function (DUF986) ISU57_12955 PF02659 Putative manganese efflux pump ISU57_12960 PF07715 TonB-dependent Receptor Plug Domain ISU57_12960 PF00593 TonB dependent receptor ISU57_12975 PF13847 Methyltransferase domain ISU57_12980 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU57_12985 PF00313 'Cold-shock' DNA-binding domain ISU57_12990 PF10736 Protein of unknown function (DUF2627) ISU57_12995 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU57_13000 PF00324 Amino acid permease ISU57_13015 PF13974 YebO-like protein ISU57_13020 PF13998 MgrB protein ISU57_13025 PF13996 YobH-like protein ISU57_13030 PF10964 Protein of unknown function (DUF2766) ISU57_13035 PF12833 Helix-turn-helix domain ISU57_13045 PF00664 ABC transporter transmembrane region ISU57_13045 PF00005 ABC transporter ISU57_13060 PF06167 Glucose-regulated metallo-peptidase M90 ISU57_13070 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU57_13070 PF00356 Bacterial regulatory proteins, lacI family ISU57_13075 PF01695 IstB-like ATP binding protein ISU57_13080 PF02796 Helix-turn-helix domain of resolvase ISU57_13080 PF00665 Integrase core domain ISU57_13090 PF00543 Nitrogen regulatory protein P-II ISU57_13095 PF00795 Carbon-nitrogen hydrolase ISU57_13095 PF02540 NAD synthase ISU57_13100 PF00158 Sigma-54 interaction domain ISU57_13100 PF00072 Response regulator receiver domain ISU57_13105 PF13942 YfhG lipoprotein ISU57_13110 PF00512 His Kinase A (phospho-acceptor) domain ISU57_13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_13115 PF01797 Transposase IS200 like ISU57_13140 PF02769 AIR synthase related protein, C-terminal domain ISU57_13140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU57_13140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU57_13145 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_13145 PF01464 Transglycosylase SLT domain ISU57_13150 PF14437 MafB19-like deaminase ISU57_13160 PF01380 SIS domain ISU57_13165 PF01418 Helix-turn-helix domain, rpiR family ISU57_13165 PF01380 SIS domain ISU57_13170 PF12838 4Fe-4S dicluster domain ISU57_13175 PF01797 Transposase IS200 like ISU57_13180 PF01648 4'-phosphopantetheinyl transferase superfamily ISU57_13185 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU57_13190 PF11967 Recombination protein O N terminal ISU57_13190 PF02565 Recombination protein O C terminal ISU57_13195 PF07650 KH domain ISU57_13195 PF01926 50S ribosome-binding GTPase ISU57_13200 PF14622 Ribonuclease-III-like ISU57_13200 PF00035 Double-stranded RNA binding motif ISU57_13205 PF10502 Signal peptidase, peptidase S26 ISU57_13210 PF00009 Elongation factor Tu GTP binding domain ISU57_13210 PF00679 Elongation factor G C-terminus ISU57_13210 PF06421 GTP-binding protein LepA C-terminus ISU57_13210 PF03144 Elongation factor Tu domain 2 ISU57_13225 PF03888 MucB/RseB N-terminal domain ISU57_13225 PF17188 MucB/RseB C-terminal domain ISU57_13230 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU57_13230 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU57_13235 PF04542 Sigma-70 region 2 ISU57_13235 PF08281 Sigma-70, region 4 ISU57_13240 PF00890 FAD binding domain ISU57_13240 PF02910 Fumarate reductase flavoprotein C-term ISU57_13245 PF05175 Methyltransferase small domain ISU57_13250 PF00270 DEAD/DEAH box helicase ISU57_13250 PF00271 Helicase conserved C-terminal domain ISU57_13255 PF12796 Ankyrin repeats (3 copies) ISU57_13265 PF01228 Glycine radical ISU57_13270 PF03167 Uracil DNA glycosylase superfamily ISU57_13275 PF01470 Pyroglutamyl peptidase ISU57_13290 PF03746 LamB/YcsF family ISU57_13295 PF02626 Carboxyltransferase domain, subdomain A and B ISU57_13310 PF01784 NIF3 (NGG1p interacting factor 3) ISU57_13315 PF02112 cAMP phosphodiesterases class-II ISU57_13320 PF00875 DNA photolyase ISU57_13320 PF03441 FAD binding domain of DNA photolyase ISU57_13325 PF08349 Protein of unknown function (DUF1722) ISU57_13330 PF10725 Protein of unknown function (DUF2517) ISU57_13345 PF03814 Potassium-transporting ATPase A subunit ISU57_13355 PF02669 K+-transporting ATPase, c chain ISU57_13360 PF00512 His Kinase A (phospho-acceptor) domain ISU57_13360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_13360 PF13492 GAF domain ISU57_13360 PF13493 Domain of unknown function (DUF4118) ISU57_13360 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU57_13365 PF00072 Response regulator receiver domain ISU57_13365 PF00486 Transcriptional regulatory protein, C terminal ISU57_13380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU57_13380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU57_13380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU57_13380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU57_13385 PF03925 SeqA protein C-terminal domain ISU57_13385 PF17206 SeqA protein N-terminal domain ISU57_13395 PF04794 YdjC-like protein ISU57_13400 PF12833 Helix-turn-helix domain ISU57_13400 PF07883 Cupin domain ISU57_13405 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU57_13410 PF02378 Phosphotransferase system, EIIC ISU57_13415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU57_13425 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU57_13430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU57_13435 PF02254 TrkA-N domain ISU57_13435 PF07885 Ion channel ISU57_13440 PF06411 HdeA/HdeB family ISU57_13445 PF03824 High-affinity nickel-transport protein ISU57_13450 PF03253 Urea transporter ISU57_13455 PF01774 UreD urease accessory protein ISU57_13460 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU57_13465 PF01730 UreF ISU57_13470 PF02814 UreE urease accessory protein, N-terminal domain ISU57_13470 PF05194 UreE urease accessory protein, C-terminal domain ISU57_13475 PF01979 Amidohydrolase family ISU57_13475 PF00449 Urease alpha-subunit, N-terminal domain ISU57_13480 PF00699 Urease beta subunit ISU57_13485 PF00547 Urease, gamma subunit ISU57_13490 PF00005 ABC transporter ISU57_13495 PF00005 ABC transporter ISU57_13500 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU57_13500 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_13505 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_13510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_13515 PF00313 'Cold-shock' DNA-binding domain ISU57_13525 PF06711 Protein of unknown function (DUF1198) ISU57_13530 PF09400 Protein of unknown function (DUF2002) ISU57_13535 PF06392 Acid shock protein repeat ISU57_13545 PF07972 NrdI Flavodoxin like ISU57_13550 PF02867 Ribonucleotide reductase, barrel domain ISU57_13550 PF00317 Ribonucleotide reductase, all-alpha domain ISU57_13550 PF08343 Ribonucleotide reductase N-terminal ISU57_13555 PF00268 Ribonucleotide reductase, small chain ISU57_13560 PF00005 ABC transporter ISU57_13560 PF00571 CBS domain ISU57_13565 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_13570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU57_13585 PF00665 Integrase core domain ISU57_13585 PF02796 Helix-turn-helix domain of resolvase ISU57_13590 PF01695 IstB-like ATP binding protein ISU57_13605 PF00589 Phage integrase family ISU57_13605 PF13356 Arm DNA-binding domain ISU57_13615 PF12697 Alpha/beta hydrolase family ISU57_13620 PF01402 Ribbon-helix-helix protein, copG family ISU57_13625 PF00258 Flavodoxin ISU57_13630 PF01475 Ferric uptake regulator family ISU57_13640 PF03573 outer membrane porin, OprD family ISU57_13645 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU57_13645 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU57_13650 PF01797 Transposase IS200 like ISU57_13655 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU57_13655 PF02378 Phosphotransferase system, EIIC ISU57_13655 PF00367 phosphotransferase system, EIIB ISU57_13660 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU57_13665 PF01979 Amidohydrolase family ISU57_13670 PF01047 MarR family ISU57_13670 PF00480 ROK family ISU57_13675 PF13344 Haloacid dehalogenase-like hydrolase ISU57_13680 PF00733 Asparagine synthase ISU57_13680 PF13537 Glutamine amidotransferase domain ISU57_13715 PF01494 FAD binding domain ISU57_13720 PF04055 Radical SAM superfamily ISU57_13720 PF01938 TRAM domain ISU57_13720 PF00919 Uncharacterized protein family UPF0004 ISU57_13725 PF02562 PhoH-like protein ISU57_13730 PF02130 Uncharacterized protein family UPF0054 ISU57_13735 PF03471 Transporter associated domain ISU57_13735 PF00571 CBS domain ISU57_13740 PF00795 Carbon-nitrogen hydrolase ISU57_13745 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_13750 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_13755 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_13760 PF00005 ABC transporter ISU57_13765 PF07295 Zinc-ribbon containing domain ISU57_13770 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU57_13770 PF08264 Anticodon-binding domain of tRNA ISU57_13770 PF00133 tRNA synthetases class I (I, L, M and V) ISU57_13775 PF04390 Lipopolysaccharide-assembly ISU57_13780 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU57_13780 PF06144 DNA polymerase III, delta subunit ISU57_13785 PF01467 Cytidylyltransferase-like ISU57_13795 PF02590 Predicted SPOUT methyltransferase ISU57_13800 PF00905 Penicillin binding protein transpeptidase domain ISU57_13800 PF03717 Penicillin-binding Protein dimerisation domain ISU57_13805 PF01098 Cell cycle protein ISU57_13810 PF03330 Lytic transglycolase ISU57_13810 PF05036 Sporulation related domain ISU57_13815 PF00768 D-alanyl-D-alanine carboxypeptidase ISU57_13815 PF07943 Penicillin-binding protein 5, C-terminal domain ISU57_13820 PF04359 Protein of unknown function (DUF493) ISU57_13825 PF03099 Biotin/lipoate A/B protein ligase family ISU57_13830 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU57_13830 PF04055 Radical SAM superfamily ISU57_13835 PF02416 mttA/Hcf106 family ISU57_13840 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU57_13845 PF00313 'Cold-shock' DNA-binding domain ISU57_13850 PF00313 'Cold-shock' DNA-binding domain ISU57_13855 PF00196 Bacterial regulatory proteins, luxR family ISU57_13880 PF00664 ABC transporter transmembrane region ISU57_13880 PF00005 ABC transporter ISU57_13890 PF04962 KduI/IolB family ISU57_13895 PF01261 Xylose isomerase-like TIM barrel ISU57_13900 PF00294 pfkB family carbohydrate kinase ISU57_13905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU57_13905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU57_13910 PF02653 Branched-chain amino acid transport system / permease component ISU57_13915 PF00005 ABC transporter ISU57_13920 PF13407 Periplasmic binding protein domain ISU57_13930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU57_13930 PF00205 Thiamine pyrophosphate enzyme, central domain ISU57_13930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU57_13935 PF00171 Aldehyde dehydrogenase family ISU57_13950 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU57_13950 PF01835 MG2 domain ISU57_13950 PF17962 Bacterial macroglobulin domain 6 ISU57_13950 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU57_13950 PF07703 Alpha-2-macroglobulin bait region domain ISU57_13950 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU57_13950 PF00207 Alpha-2-macroglobulin family ISU57_13955 PF01797 Transposase IS200 like ISU57_13960 PF06832 Penicillin-Binding Protein C-terminus Family ISU57_13960 PF00905 Penicillin binding protein transpeptidase domain ISU57_13960 PF00912 Transglycosylase ISU57_13965 PF13693 Winged helix-turn-helix DNA-binding ISU57_13985 PF05638 Type VI secretion system effector, Hcp ISU57_14000 PF03797 Autotransporter beta-domain ISU57_14000 PF13018 Extended Signal Peptide of Type V secretion system ISU57_14000 PF03212 Pertactin ISU57_14000 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU57_14020 PF00872 Transposase, Mutator family ISU57_14035 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU57_14035 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU57_14035 PF14310 Fibronectin type III-like domain ISU57_14045 PF00248 Aldo/keto reductase family ISU57_14050 PF00248 Aldo/keto reductase family ISU57_14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_14055 PF03466 LysR substrate binding domain ISU57_14060 PF00665 Integrase core domain ISU57_14060 PF02796 Helix-turn-helix domain of resolvase ISU57_14065 PF01695 IstB-like ATP binding protein ISU57_14080 PF00782 Dual specificity phosphatase, catalytic domain ISU57_14085 PF12146 Serine aminopeptidase, S33 ISU57_14085 PF12147 Putative methyltransferase ISU57_14090 PF01553 Acyltransferase ISU57_14100 PF01066 CDP-alcohol phosphatidyltransferase ISU57_14110 PF00589 Phage integrase family ISU57_14140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU57_14140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU57_14150 PF01797 Transposase IS200 like ISU57_14155 PF09190 DALR domain ISU57_14155 PF01406 tRNA synthetases class I (C) catalytic domain ISU57_14160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU57_14165 PF00149 Calcineurin-like phosphoesterase ISU57_14170 PF00731 AIR carboxylase ISU57_14175 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU57_14175 PF02222 ATP-grasp domain ISU57_14185 PF00005 ABC transporter ISU57_14190 PF13472 GDSL-like Lipase/Acylhydrolase family ISU57_14195 PF00106 short chain dehydrogenase ISU57_14200 PF00085 Thioredoxin ISU57_14205 PF16200 C-terminal region of band_7 ISU57_14205 PF01145 SPFH domain / Band 7 family ISU57_14210 PF01957 NfeD-like C-terminal, partner-binding ISU57_14215 PF13411 MerR HTH family regulatory protein ISU57_14220 PF00403 Heavy-metal-associated domain ISU57_14225 PF01963 TraB family ISU57_14230 PF04073 Aminoacyl-tRNA editing domain ISU57_14245 PF07690 Major Facilitator Superfamily ISU57_14250 PF00999 Sodium/hydrogen exchanger family ISU57_14250 PF02254 TrkA-N domain ISU57_14255 PF00294 pfkB family carbohydrate kinase ISU57_14260 PF02706 Chain length determinant protein ISU57_14265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU57_14265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU57_14265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU57_14265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU57_14270 PF00535 Glycosyl transferase family 2 ISU57_14275 PF01050 Mannose-6-phosphate isomerase ISU57_14275 PF00483 Nucleotidyl transferase ISU57_14280 PF01370 NAD dependent epimerase/dehydratase family ISU57_14290 PF13439 Glycosyltransferase Family 4 ISU57_14290 PF00534 Glycosyl transferases group 1 ISU57_14320 PF01370 NAD dependent epimerase/dehydratase family ISU57_14325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU57_14330 PF16363 GDP-mannose 4,6 dehydratase ISU57_14335 PF00483 Nucleotidyl transferase ISU57_14340 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU57_14340 PF00970 Oxidoreductase FAD-binding domain ISU57_14340 PF00175 Oxidoreductase NAD-binding domain ISU57_14345 PF00762 Ferrochelatase ISU57_14350 PF05191 Adenylate kinase, active site lid ISU57_14355 PF00183 Hsp90 protein ISU57_14355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_14360 PF02132 RecR protein ISU57_14360 PF13662 Toprim domain ISU57_14365 PF02575 YbaB/EbfC DNA-binding family ISU57_14370 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU57_14370 PF12169 DNA polymerase III subunits gamma and tau domain III ISU57_14370 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU57_14375 PF00156 Phosphoribosyl transferase domain ISU57_14380 PF04304 Protein of unknown function (DUF454) ISU57_14390 PF10689 Protein of unknown function (DUF2496) ISU57_14395 PF00924 Mechanosensitive ion channel ISU57_14395 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU57_14395 PF12795 Mechanosensitive ion channel porin domain ISU57_14405 PF02635 DsrE/DsrF-like family ISU57_14410 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU57_14410 PF00440 Bacterial regulatory proteins, tetR family ISU57_14415 PF00529 HlyD membrane-fusion protein of T1SS ISU57_14415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_14420 PF00873 AcrB/AcrD/AcrF family ISU57_14425 PF01197 Ribosomal protein L31 ISU57_14430 PF00444 Ribosomal protein L36 ISU57_14440 PF10757 Biofilm formation regulator YbaJ ISU57_14445 PF05321 Haemolysin expression modulating protein ISU57_14455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU57_14460 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU57_14470 PF00909 Ammonium Transporter Family ISU57_14475 PF00543 Nitrogen regulatory protein P-II ISU57_14480 PF00005 ABC transporter ISU57_14480 PF00664 ABC transporter transmembrane region ISU57_14485 PF00664 ABC transporter transmembrane region ISU57_14485 PF00005 ABC transporter ISU57_14490 PF01037 Lrp/AsnC ligand binding domain ISU57_14490 PF13404 AsnC-type helix-turn-helix domain ISU57_14495 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_14505 PF12793 Sugar transport-related sRNA regulator N-term ISU57_14505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU57_14510 PF06508 Queuosine biosynthesis protein QueC ISU57_14525 PF13145 PPIC-type PPIASE domain ISU57_14530 PF00216 Bacterial DNA-binding protein ISU57_14535 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU57_14535 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_14535 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU57_14540 PF07724 AAA domain (Cdc48 subfamily) ISU57_14540 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_14540 PF06689 ClpX C4-type zinc finger ISU57_14545 PF00574 Clp protease ISU57_14550 PF05697 Bacterial trigger factor protein (TF) ISU57_14550 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU57_14550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU57_14555 PF01722 BolA-like protein ISU57_14560 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU57_14560 PF03923 Uncharacterized lipoprotein ISU57_14565 PF07690 Major Facilitator Superfamily ISU57_14570 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU57_14575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU57_14575 PF06481 COX Aromatic Rich Motif ISU57_14580 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU57_14585 PF00510 Cytochrome c oxidase subunit III ISU57_14590 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU57_14595 PF01040 UbiA prenyltransferase family ISU57_14600 PF07690 Major Facilitator Superfamily ISU57_14605 PF04461 Protein of unknown function (DUF520) ISU57_14610 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU57_14610 PF02558 Ketopantoate reductase PanE/ApbA ISU57_14615 PF01965 DJ-1/PfpI family ISU57_14620 PF02926 THUMP domain ISU57_14620 PF02568 Thiamine biosynthesis protein (ThiI) ISU57_14625 PF02609 Exonuclease VII small subunit ISU57_14630 PF00348 Polyprenyl synthetase ISU57_14635 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU57_14635 PF02779 Transketolase, pyrimidine binding domain ISU57_14635 PF02780 Transketolase, C-terminal domain ISU57_14640 PF01797 Transposase IS200 like ISU57_14645 PF01695 IstB-like ATP binding protein ISU57_14650 PF02796 Helix-turn-helix domain of resolvase ISU57_14650 PF00665 Integrase core domain ISU57_14655 PF04608 Phosphatidylglycerophosphatase A ISU57_14660 PF02769 AIR synthase related protein, C-terminal domain ISU57_14660 PF00586 AIR synthase related protein, N-terminal domain ISU57_14665 PF01029 NusB family ISU57_14670 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU57_14675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU57_14675 PF01872 RibD C-terminal domain ISU57_14680 PF03477 ATP cone domain ISU57_14695 PF01797 Transposase IS200 like ISU57_14700 PF07549 SecD/SecF GG Motif ISU57_14700 PF02355 Protein export membrane protein ISU57_14705 PF02355 Protein export membrane protein ISU57_14705 PF13721 SecD export protein N-terminal TM region ISU57_14705 PF07549 SecD/SecF GG Motif ISU57_14710 PF02699 Preprotein translocase subunit ISU57_14715 PF01702 Queuine tRNA-ribosyltransferase ISU57_14720 PF02547 Queuosine biosynthesis protein ISU57_14725 PF04336 Acyl carrier protein phosphodiesterase ISU57_14730 PF00578 AhpC/TSA family ISU57_14730 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU57_14750 PF00128 Alpha amylase, catalytic domain ISU57_14750 PF02903 Alpha amylase, N-terminal ig-like domain ISU57_14755 PF00324 Amino acid permease ISU57_14760 PF05525 Branched-chain amino acid transport protein ISU57_14765 PF12849 PBP superfamily domain ISU57_14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_14770 PF11808 Phosphate regulon sensor protein PhoR ISU57_14770 PF00989 PAS fold ISU57_14770 PF00512 His Kinase A (phospho-acceptor) domain ISU57_14775 PF00486 Transcriptional regulatory protein, C terminal ISU57_14775 PF00072 Response regulator receiver domain ISU57_14780 PF00149 Calcineurin-like phosphoesterase ISU57_14780 PF12320 Type 5 capsule protein repressor C-terminal domain ISU57_14785 PF13476 AAA domain ISU57_14790 PF00480 ROK family ISU57_14795 PF04381 Putative exonuclease, RdgC ISU57_14800 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU57_14805 PF01202 Shikimate kinase ISU57_14815 PF08241 Methyltransferase domain ISU57_14825 PF07317 Flagellar regulator YcgR ISU57_14825 PF07238 PilZ domain ISU57_14830 PF00171 Aldehyde dehydrogenase family ISU57_14835 PF00696 Amino acid kinase family ISU57_14835 PF01472 PUA domain ISU57_14840 PF07417 Sigma factor-binding transcriptional regulator Crl ISU57_14845 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU57_14850 PF00156 Phosphoribosyl transferase domain ISU57_14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_14865 PF03466 LysR substrate binding domain ISU57_14870 PF07687 Peptidase dimerisation domain ISU57_14870 PF01546 Peptidase family M20/M25/M40 ISU57_14875 PF11798 IMS family HHH motif ISU57_14875 PF00817 impB/mucB/samB family ISU57_14875 PF11799 impB/mucB/samB family C-terminal domain ISU57_14880 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU57_14890 PF02424 ApbE family ISU57_14895 PF00175 Oxidoreductase NAD-binding domain ISU57_14895 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU57_14895 PF00970 Oxidoreductase FAD-binding domain ISU57_14900 PF02508 Rnf-Nqr subunit, membrane protein ISU57_14905 PF02508 Rnf-Nqr subunit, membrane protein ISU57_14910 PF04205 FMN-binding domain ISU57_14915 PF03116 NQR2, RnfD, RnfE family ISU57_14920 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU57_14920 PF11973 NQRA C-terminal domain ISU57_14925 PF03734 L,D-transpeptidase catalytic domain ISU57_14930 PF13230 Glutamine amidotransferases class-II ISU57_14935 PF13580 SIS domain ISU57_14940 PF09317 Domain of unknown function (DUF1974) ISU57_14940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU57_14940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU57_14950 PF18071 HMW1C N-terminal ISU57_14950 PF18254 HMW1 domain 2 ISU57_14960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU57_14960 PF08479 POTRA domain, ShlB-type ISU57_14970 PF01546 Peptidase family M20/M25/M40 ISU57_14970 PF07687 Peptidase dimerisation domain ISU57_14975 PF00266 Aminotransferase class-V ISU57_14980 PF00665 Integrase core domain ISU57_14980 PF02796 Helix-turn-helix domain of resolvase ISU57_14985 PF01695 IstB-like ATP binding protein ISU57_14990 PF00266 Aminotransferase class-V ISU57_14995 PF00005 ABC transporter ISU57_15000 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_15005 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_15010 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_15025 PF01425 Amidase ISU57_15035 PF07690 Major Facilitator Superfamily ISU57_15040 PF03591 AzlC protein ISU57_15045 PF05437 Branched-chain amino acid transport protein (AzlD) ISU57_15050 PF01047 MarR family ISU57_15055 PF00529 HlyD membrane-fusion protein of T1SS ISU57_15055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_15060 PF07690 Major Facilitator Superfamily ISU57_15065 PF00588 SpoU rRNA Methylase family ISU57_15065 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU57_15070 PF00085 Thioredoxin ISU57_15075 PF03942 DTW domain ISU57_15080 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU57_15080 PF00583 Acetyltransferase (GNAT) family ISU57_15080 PF13380 CoA binding domain ISU57_15085 PF13091 PLD-like domain ISU57_15090 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU57_15120 PF02861 Clp amino terminal domain, pathogenicity island component ISU57_15120 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_15120 PF07724 AAA domain (Cdc48 subfamily) ISU57_15120 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_15120 PF17871 AAA lid domain ISU57_15125 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU57_15130 PF00849 RNA pseudouridylate synthase ISU57_15130 PF01479 S4 domain ISU57_15135 PF13525 Outer membrane lipoprotein ISU57_15140 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU57_15145 PF01797 Transposase IS200 like ISU57_15155 PF00665 Integrase core domain ISU57_15155 PF02796 Helix-turn-helix domain of resolvase ISU57_15160 PF01695 IstB-like ATP binding protein ISU57_15170 PF02153 Prephenate dehydrogenase ISU57_15170 PF01817 Chorismate mutase type II ISU57_15175 PF00793 DAHP synthetase I family ISU57_15180 PF00072 Response regulator receiver domain ISU57_15180 PF04397 LytTr DNA-binding domain ISU57_15190 PF04338 Protein of unknown function, DUF481 ISU57_15195 PF01797 Transposase IS200 like ISU57_15200 PF01245 Ribosomal protein L19 ISU57_15205 PF01746 tRNA (Guanine-1)-methyltransferase ISU57_15210 PF01782 RimM N-terminal domain ISU57_15210 PF05239 PRC-barrel domain ISU57_15215 PF00886 Ribosomal protein S16 ISU57_15220 PF02881 SRP54-type protein, helical bundle domain ISU57_15220 PF02978 Signal peptide binding domain ISU57_15220 PF00448 SRP54-type protein, GTPase domain ISU57_15225 PF01578 Cytochrome C assembly protein ISU57_15230 PF01595 Cyclin M transmembrane N-terminal domain ISU57_15230 PF03471 Transporter associated domain ISU57_15230 PF00571 CBS domain ISU57_15235 PF01797 Transposase IS200 like ISU57_15240 PF02664 S-Ribosylhomocysteinase (LuxS) ISU57_15245 PF04262 Glutamate-cysteine ligase ISU57_15250 PF09335 SNARE associated Golgi protein ISU57_15255 PF13419 Haloacid dehalogenase-like hydrolase ISU57_15285 PF02599 Global regulator protein family ISU57_15290 PF02272 DHHA1 domain ISU57_15290 PF01411 tRNA synthetases class II (A) ISU57_15290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU57_15295 PF02631 RecX family ISU57_15300 PF00154 recA bacterial DNA recombination protein ISU57_15305 PF02464 Competence-damaged protein ISU57_15310 PF07690 Major Facilitator Superfamily ISU57_15325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_15325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_15330 PF02779 Transketolase, pyrimidine binding domain ISU57_15330 PF02780 Transketolase, C-terminal domain ISU57_15335 PF00456 Transketolase, thiamine diphosphate binding domain ISU57_15340 PF02653 Branched-chain amino acid transport system / permease component ISU57_15345 PF00005 ABC transporter ISU57_15355 PF13407 Periplasmic binding protein domain ISU57_15360 PF00141 Peroxidase ISU57_15365 PF07361 Cytochrome b562 ISU57_15370 PF01292 Prokaryotic cytochrome b561 ISU57_15375 PF02613 Nitrate reductase delta subunit ISU57_15380 PF04976 DMSO reductase anchor subunit (DmsC) ISU57_15385 PF13247 4Fe-4S dicluster domain ISU57_15385 PF12800 4Fe-4S binding domain ISU57_15390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU57_15390 PF00384 Molybdopterin oxidoreductase ISU57_15390 PF01568 Molydopterin dinucleotide binding domain ISU57_15395 PF00596 Class II Aldolase and Adducin N-terminal domain ISU57_15400 PF00455 DeoR C terminal sensor domain ISU57_15400 PF08220 DeoR-like helix-turn-helix domain ISU57_15410 PF01797 Transposase IS200 like ISU57_15415 PF00005 ABC transporter ISU57_15420 PF02653 Branched-chain amino acid transport system / permease component ISU57_15425 PF02653 Branched-chain amino acid transport system / permease component ISU57_15430 PF01261 Xylose isomerase-like TIM barrel ISU57_15435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_15435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_15440 PF05683 Fumarase C-terminus ISU57_15440 PF05681 Fumarate hydratase (Fumerase) ISU57_15450 PF00557 Metallopeptidase family M24 ISU57_15460 PF07715 TonB-dependent Receptor Plug Domain ISU57_15460 PF00593 TonB dependent receptor ISU57_15470 PF03150 Di-haem cytochrome c peroxidase ISU57_15470 PF14376 Haem-binding domain ISU57_15470 PF00034 Cytochrome c ISU57_15475 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_15490 PF01022 Bacterial regulatory protein, arsR family ISU57_15495 PF02040 Arsenical pump membrane protein ISU57_15500 PF04198 Putative sugar-binding domain ISU57_15500 PF13936 Helix-turn-helix domain ISU57_15505 PF02734 DAK2 domain ISU57_15510 PF02733 Dak1 domain ISU57_15520 PF08240 Alcohol dehydrogenase GroES-like domain ISU57_15520 PF00107 Zinc-binding dehydrogenase ISU57_15525 PF02502 Ribose/Galactose Isomerase ISU57_15530 PF01624 MutS domain I ISU57_15530 PF00488 MutS domain V ISU57_15530 PF05190 MutS family domain IV ISU57_15530 PF05192 MutS domain III ISU57_15530 PF05188 MutS domain II ISU57_15535 PF04542 Sigma-70 region 2 ISU57_15535 PF04539 Sigma-70 region 3 ISU57_15535 PF04545 Sigma-70, region 4 ISU57_15535 PF00140 Sigma-70 factor, region 1.2 ISU57_15540 PF01551 Peptidase family M23 ISU57_15540 PF01476 LysM domain ISU57_15550 PF01975 Survival protein SurE ISU57_15555 PF01142 tRNA pseudouridine synthase D (TruD) ISU57_15560 PF02542 YgbB family ISU57_15565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU57_15570 PF04977 Septum formation initiator ISU57_15575 PF12084 Protein of unknown function (DUF3561) ISU57_15585 PF00009 Elongation factor Tu GTP binding domain ISU57_15590 PF01507 Phosphoadenosine phosphosulfate reductase family ISU57_15625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU57_15625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU57_15630 PF00175 Oxidoreductase NAD-binding domain ISU57_15630 PF00258 Flavodoxin ISU57_15630 PF00667 FAD binding domain ISU57_15635 PF01242 6-pyruvoyl tetrahydropterin synthase ISU57_15640 PF04055 Radical SAM superfamily ISU57_15645 PF00080 Copper/zinc superoxide dismutase (SODC) ISU57_15650 PF03952 Enolase, N-terminal domain ISU57_15650 PF00113 Enolase, C-terminal TIM barrel domain ISU57_15655 PF00117 Glutamine amidotransferase class-I ISU57_15655 PF06418 CTP synthase N-terminus ISU57_15660 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU57_15665 PF04607 Region found in RelA / SpoT proteins ISU57_15665 PF02824 TGS domain ISU57_15665 PF13291 ACT domain ISU57_15670 PF05958 tRNA (Uracil-5-)-methyltransferase ISU57_15670 PF01938 TRAM domain ISU57_15680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU57_15680 PF01627 Hpt domain ISU57_15680 PF00512 His Kinase A (phospho-acceptor) domain ISU57_15680 PF00672 HAMP domain ISU57_15680 PF00072 Response regulator receiver domain ISU57_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_15685 PF00595 PDZ domain ISU57_15690 PF01966 HD domain ISU57_15690 PF13286 Phosphohydrolase-associated domain ISU57_15695 PF01048 Phosphorylase superfamily ISU57_15700 PF01497 Periplasmic binding protein ISU57_15705 PF03458 UPF0126 domain ISU57_15710 PF01521 Iron-sulphur cluster biosynthesis ISU57_15715 PF00654 Voltage gated chloride channel ISU57_15720 PF00202 Aminotransferase class-III ISU57_15725 PF01032 FecCD transport family ISU57_15730 PF01497 Periplasmic binding protein ISU57_15735 PF00005 ABC transporter ISU57_15740 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU57_15740 PF00912 Transglycosylase ISU57_15740 PF00905 Penicillin binding protein transpeptidase domain ISU57_15740 PF14814 Bifunctional transglycosylase second domain ISU57_15745 PF00271 Helicase conserved C-terminal domain ISU57_15745 PF04408 Helicase associated domain (HA2) ISU57_15745 PF00270 DEAD/DEAH box helicase ISU57_15745 PF08482 ATP-dependent helicase C-terminal ISU57_15750 PF02834 LigT like Phosphoesterase ISU57_15755 PF17746 SfsA N-terminal OB domain ISU57_15755 PF03749 Sugar fermentation stimulation protein RE domain ISU57_15760 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU57_15765 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU57_15770 PF01743 Poly A polymerase head domain ISU57_15770 PF12626 Polymerase A arginine-rich C-terminus ISU57_15770 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU57_15775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU57_15780 PF02548 Ketopantoate hydroxymethyltransferase ISU57_15785 PF02569 Pantoate-beta-alanine ligase ISU57_15790 PF02261 Aspartate decarboxylase ISU57_15800 PF01061 ABC-2 type transporter ISU57_15805 PF00005 ABC transporter ISU57_15810 PF00484 Carbonic anhydrase ISU57_15815 PF00156 Phosphoribosyl transferase domain ISU57_15820 PF00394 Multicopper oxidase ISU57_15820 PF07732 Multicopper oxidase ISU57_15820 PF07731 Multicopper oxidase ISU57_15820 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU57_15825 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU57_15830 PF17284 Spermidine synthase tetramerisation domain ISU57_15835 PF02675 S-adenosylmethionine decarboxylase ISU57_15840 PF00892 EamA-like transporter family ISU57_15845 PF06062 Uncharacterised protein family (UPF0231) ISU57_15850 PF06434 Aconitate hydratase 2 N-terminus ISU57_15850 PF00330 Aconitase family (aconitate hydratase) ISU57_15850 PF11791 Aconitate B N-terminal domain ISU57_15855 PF01797 Transposase IS200 like ISU57_15860 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_15860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU57_15865 PF02817 e3 binding domain ISU57_15865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU57_15865 PF00364 Biotin-requiring enzyme ISU57_15870 PF00456 Transketolase, thiamine diphosphate binding domain ISU57_15870 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU57_15875 PF00392 Bacterial regulatory proteins, gntR family ISU57_15875 PF07729 FCD domain ISU57_15880 PF00324 Amino acid permease ISU57_15885 PF17113 Regulatory signalling modulator protein AmpE ISU57_15890 PF01510 N-acetylmuramoyl-L-alanine amidase ISU57_15895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU57_15895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU57_15900 PF07963 Prokaryotic N-terminal methylation motif ISU57_15905 PF00437 Type II/IV secretion system protein ISU57_15905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU57_15910 PF00482 Type II secretion system (T2SS), protein F ISU57_15915 PF00478 IMP dehydrogenase / GMP reductase domain ISU57_15920 PF01121 Dephospho-CoA kinase ISU57_15925 PF07072 Cell division protein ISU57_15930 PF03884 DNA gyrase inhibitor YacG ISU57_15935 PF01797 Transposase IS200 like ISU57_15940 PF02796 Helix-turn-helix domain of resolvase ISU57_15940 PF00665 Integrase core domain ISU57_15945 PF01695 IstB-like ATP binding protein ISU57_15950 PF08676 MutL C terminal dimerisation domain ISU57_15950 PF01119 DNA mismatch repair protein, C-terminal domain ISU57_15960 PF00589 Phage integrase family ISU57_15960 PF13356 Arm DNA-binding domain ISU57_15970 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU57_15975 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU57_15980 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU57_15980 PF00883 Cytosol aminopeptidase family, catalytic domain ISU57_15985 PF04364 DNA polymerase III chi subunit, HolC ISU57_15990 PF00133 tRNA synthetases class I (I, L, M and V) ISU57_15990 PF10458 Valyl tRNA synthetase tRNA binding arm ISU57_15990 PF08264 Anticodon-binding domain of tRNA ISU57_15995 PF00583 Acetyltransferase (GNAT) family ISU57_16000 PF06877 Regulator of ribonuclease activity B ISU57_16005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU57_16005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU57_16010 PF04074 YhcH/YjgK/YiaL ISU57_16020 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_16025 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_16025 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU57_16030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_16030 PF00005 ABC transporter ISU57_16035 PF00005 ABC transporter ISU57_16035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU57_16040 PF03477 ATP cone domain ISU57_16040 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU57_16050 PF07702 UTRA domain ISU57_16050 PF00392 Bacterial regulatory proteins, gntR family ISU57_16055 PF06754 Phosphonate metabolism protein PhnG ISU57_16060 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU57_16065 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU57_16070 PF06007 Phosphonate metabolism protein PhnJ ISU57_16075 PF00005 ABC transporter ISU57_16080 PF00005 ABC transporter ISU57_16085 PF07969 Amidohydrolase family ISU57_16095 PF12706 Beta-lactamase superfamily domain ISU57_16100 PF13460 NAD(P)H-binding ISU57_16115 PF17912 MalK OB fold domain ISU57_16115 PF03459 TOBE domain ISU57_16115 PF00005 ABC transporter ISU57_16120 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_16125 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_16130 PF13416 Bacterial extracellular solute-binding protein ISU57_16145 PF01541 GIY-YIG catalytic domain ISU57_16150 PF13508 Acetyltransferase (GNAT) domain ISU57_16155 PF02036 SCP-2 sterol transfer family ISU57_16160 PF01136 Peptidase family U32 ISU57_16165 PF01136 Peptidase family U32 ISU57_16170 PF02321 Outer membrane efflux protein ISU57_16170 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU57_16175 PF00873 AcrB/AcrD/AcrF family ISU57_16180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_16180 PF00529 HlyD membrane-fusion protein of T1SS ISU57_16185 PF00296 Luciferase-like monooxygenase ISU57_16195 PF01381 Helix-turn-helix ISU57_16205 PF12343 Cold shock protein DEAD box A ISU57_16205 PF03880 DbpA RNA binding domain ISU57_16205 PF00271 Helicase conserved C-terminal domain ISU57_16205 PF00270 DEAD/DEAH box helicase ISU57_16215 PF13181 Tetratricopeptide repeat ISU57_16215 PF07719 Tetratricopeptide repeat ISU57_16220 PF00575 S1 RNA binding domain ISU57_16220 PF01138 3' exoribonuclease family, domain 1 ISU57_16220 PF00013 KH domain ISU57_16220 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU57_16220 PF03725 3' exoribonuclease family, domain 2 ISU57_16230 PF00312 Ribosomal protein S15 ISU57_16235 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU57_16235 PF09157 Pseudouridine synthase II TruB, C-terminal ISU57_16235 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU57_16240 PF02033 Ribosome-binding factor A ISU57_16245 PF11987 Translation-initiation factor 2 ISU57_16245 PF08364 Bacterial translation initiation factor IF-2 associated region ISU57_16245 PF03144 Elongation factor Tu domain 2 ISU57_16245 PF00009 Elongation factor Tu GTP binding domain ISU57_16245 PF04760 Translation initiation factor IF-2, N-terminal region ISU57_16250 PF00575 S1 RNA binding domain ISU57_16250 PF08529 NusA N-terminal domain ISU57_16250 PF13184 NusA-like KH domain ISU57_16255 PF17384 RimP C-terminal SH3 domain ISU57_16255 PF02576 RimP N-terminal domain ISU57_16270 PF03840 Preprotein translocase SecG subunit ISU57_16275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU57_16275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU57_16275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU57_16275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU57_16280 PF00809 Pterin binding enzyme ISU57_16285 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_16285 PF01434 Peptidase family M41 ISU57_16285 PF17862 AAA+ lid domain ISU57_16285 PF06480 FtsH Extracellular ISU57_16290 PF01728 FtsJ-like methyltransferase ISU57_16295 PF01985 CRS1 / YhbY (CRM) domain ISU57_16300 PF03449 Transcription elongation factor, N-terminal ISU57_16300 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU57_16305 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU57_16310 PF00072 Response regulator receiver domain ISU57_16310 PF00486 Transcriptional regulatory protein, C terminal ISU57_16315 PF00672 HAMP domain ISU57_16315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_16315 PF00512 His Kinase A (phospho-acceptor) domain ISU57_16320 PF01018 GTP1/OBG ISU57_16320 PF01926 50S ribosome-binding GTPase ISU57_16325 PF00892 EamA-like transporter family ISU57_16330 PF01016 Ribosomal L27 protein ISU57_16335 PF00829 Ribosomal prokaryotic L21 protein ISU57_16340 PF00348 Polyprenyl synthetase ISU57_16350 PF13693 Winged helix-turn-helix DNA-binding ISU57_16355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU57_16355 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU57_16360 PF02863 Arginine repressor, C-terminal domain ISU57_16360 PF01316 Arginine repressor, DNA binding domain ISU57_16370 PF01225 Mur ligase family, catalytic domain ISU57_16370 PF08245 Mur ligase middle domain ISU57_16370 PF02875 Mur ligase family, glutamate ligase domain ISU57_16375 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU57_16380 PF00719 Inorganic pyrophosphatase ISU57_16385 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU57_16390 PF04357 TamB, inner membrane protein subunit of TAM complex ISU57_16395 PF01103 Surface antigen ISU57_16395 PF17243 POTRA domain TamA domain 1 ISU57_16395 PF07244 Surface antigen variable number repeat ISU57_16400 PF01625 Peptide methionine sulfoxide reductase ISU57_16405 PF01595 Cyclin M transmembrane N-terminal domain ISU57_16405 PF00571 CBS domain ISU57_16405 PF03471 Transporter associated domain ISU57_16410 PF06526 Protein of unknown function (DUF1107) ISU57_16415 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU57_16420 PF00459 Inositol monophosphatase family ISU57_16425 PF02872 5'-nucleotidase, C-terminal domain ISU57_16425 PF00149 Calcineurin-like phosphoesterase ISU57_16430 PF01814 Hemerythrin HHE cation binding domain ISU57_16430 PF04405 Domain of Unknown function (DUF542) ISU57_16435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU57_16435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU57_16440 PF04225 Opacity-associated protein A LysM-like domain ISU57_16440 PF08525 Opacity-associated protein A N-terminal motif ISU57_16450 PF01797 Transposase IS200 like ISU57_16455 PF03948 Ribosomal protein L9, C-terminal domain ISU57_16455 PF01281 Ribosomal protein L9, N-terminal domain ISU57_16460 PF01084 Ribosomal protein S18 ISU57_16465 PF00436 Single-strand binding protein family ISU57_16470 PF01250 Ribosomal protein S6 ISU57_16475 PF00326 Prolyl oligopeptidase family ISU57_16480 PF02796 Helix-turn-helix domain of resolvase ISU57_16480 PF00665 Integrase core domain ISU57_16485 PF01695 IstB-like ATP binding protein ISU57_16495 PF07338 Protein of unknown function (DUF1471) ISU57_16500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU57_16500 PF02770 Acyl-CoA dehydrogenase, middle domain ISU57_16500 PF18158 Adaptive response protein AidB N-terminal domain ISU57_16505 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU57_16505 PF00588 SpoU rRNA Methylase family ISU57_16510 PF08206 Ribonuclease B OB domain ISU57_16510 PF17876 Cold shock domain ISU57_16510 PF08461 Ribonuclease R winged-helix domain ISU57_16510 PF00773 RNB domain ISU57_16510 PF00575 S1 RNA binding domain ISU57_16515 PF02082 Transcriptional regulator ISU57_16520 PF00709 Adenylosuccinate synthetase ISU57_16525 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU57_16530 PF01145 SPFH domain / Band 7 family ISU57_16535 PF12221 Bacterial membrane protein N terminal ISU57_16535 PF01145 SPFH domain / Band 7 family ISU57_16540 PF13167 GTP-binding GTPase N-terminal ISU57_16540 PF01926 50S ribosome-binding GTPase ISU57_16540 PF16360 GTP-binding GTPase Middle Region ISU57_16545 PF17209 Hfq protein ISU57_16555 PF01119 DNA mismatch repair protein, C-terminal domain ISU57_16555 PF08676 MutL C terminal dimerisation domain ISU57_16560 PF01520 N-acetylmuramoyl-L-alanine amidase ISU57_16565 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU57_16570 PF01256 Carbohydrate kinase ISU57_16570 PF03853 YjeF-related protein N-terminus ISU57_16575 PF08331 Domain of unknown function (DUF1730) ISU57_16590 PF00929 Exonuclease ISU57_16595 PF03193 RsgA GTPase ISU57_16600 PF02666 Phosphatidylserine decarboxylase ISU57_16605 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU57_16605 PF12795 Mechanosensitive ion channel porin domain ISU57_16605 PF00924 Mechanosensitive ion channel ISU57_16610 PF00152 tRNA synthetases class II (D, K and N) ISU57_16620 PF00890 FAD binding domain ISU57_16620 PF02910 Fumarate reductase flavoprotein C-term ISU57_16625 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU57_16625 PF13183 4Fe-4S dicluster domain ISU57_16630 PF02300 Fumarate reductase subunit C ISU57_16635 PF02313 Fumarate reductase subunit D ISU57_16640 PF00893 Small Multidrug Resistance protein ISU57_16645 PF08207 Elongation factor P (EF-P) KOW-like domain ISU57_16645 PF09285 Elongation factor P, C-terminal ISU57_16645 PF01132 Elongation factor P (EF-P) OB domain ISU57_16650 PF04055 Radical SAM superfamily ISU57_16655 PF13698 Domain of unknown function (DUF4156) ISU57_16660 PF00118 TCP-1/cpn60 chaperonin family ISU57_16665 PF00166 Chaperonin 10 Kd subunit ISU57_16670 PF04186 FxsA cytoplasmic membrane protein ISU57_16675 PF00206 Lyase ISU57_16675 PF10415 Fumarase C C-terminus ISU57_16680 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU57_16685 PF03091 CutA1 divalent ion tolerance protein ISU57_16690 PF11412 Disulphide bond corrector protein DsbC ISU57_16690 PF02683 Cytochrome C biogenesis protein transmembrane region ISU57_16695 PF01568 Molydopterin dinucleotide binding domain ISU57_16695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU57_16695 PF00384 Molybdopterin oxidoreductase ISU57_16700 PF13247 4Fe-4S dicluster domain ISU57_16700 PF12800 4Fe-4S binding domain ISU57_16705 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_16705 PF13247 4Fe-4S dicluster domain ISU57_16705 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU57_16735 PF06379 L-rhamnose-proton symport protein (RhaT) ISU57_16740 PF12833 Helix-turn-helix domain ISU57_16740 PF02311 AraC-like ligand binding domain ISU57_16745 PF12833 Helix-turn-helix domain ISU57_16745 PF02311 AraC-like ligand binding domain ISU57_16755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_16755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_16760 PF06134 L-rhamnose isomerase (RhaA) ISU57_16765 PF00596 Class II Aldolase and Adducin N-terminal domain ISU57_16770 PF00465 Iron-containing alcohol dehydrogenase ISU57_16775 PF05336 L-rhamnose mutarotase ISU57_16780 PF00436 Single-strand binding protein family ISU57_16785 PF17760 UvrA interaction domain ISU57_16785 PF17755 UvrA DNA-binding domain ISU57_16785 PF00005 ABC transporter ISU57_16790 PF04237 YjbR ISU57_16795 PF00155 Aminotransferase class I and II ISU57_16800 PF00842 Alanine racemase, C-terminal domain ISU57_16800 PF01168 Alanine racemase, N-terminal domain ISU57_16805 PF00772 DnaB-like helicase N terminal domain ISU57_16805 PF03796 DnaB-like helicase C terminal domain ISU57_16810 PF08240 Alcohol dehydrogenase GroES-like domain ISU57_16810 PF00107 Zinc-binding dehydrogenase ISU57_16815 PF09583 Phage shock protein G (Phageshock_PspG) ISU57_16820 PF01207 Dihydrouridine synthase (Dus) ISU57_16825 PF01475 Ferric uptake regulator family ISU57_16830 PF01726 LexA DNA binding domain ISU57_16830 PF00717 Peptidase S24-like ISU57_16835 PF01219 Prokaryotic diacylglycerol kinase ISU57_16840 PF01553 Acyltransferase ISU57_16845 PF01040 UbiA prenyltransferase family ISU57_16850 PF04345 Chorismate lyase ISU57_16855 PF12951 Passenger-associated-transport-repeat ISU57_16860 PF08031 Berberine and berberine like ISU57_16860 PF01565 FAD binding domain ISU57_16875 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_16880 PF00577 Outer membrane usher protein ISU57_16880 PF13954 PapC N-terminal domain ISU57_16880 PF13953 PapC C-terminal domain ISU57_16890 PF02342 TerD domain ISU57_16895 PF02342 TerD domain ISU57_16900 PF03741 Integral membrane protein TerC family ISU57_16905 PF05099 Tellurite resistance protein TerB ISU57_16910 PF02342 TerD domain ISU57_16915 PF02342 TerD domain ISU57_16935 PF15608 PELOTA RNA binding domain ISU57_16935 PF11202 Phosphoribosyl transferase (PRTase) ISU57_16955 PF04055 Radical SAM superfamily ISU57_16960 PF06228 Haem utilisation ChuX/HutX ISU57_16965 PF13460 NAD(P)H-binding ISU57_16975 PF07715 TonB-dependent Receptor Plug Domain ISU57_16975 PF00593 TonB dependent receptor ISU57_16980 PF05171 Haemin-degrading HemS.ChuX domain ISU57_16985 PF01497 Periplasmic binding protein ISU57_16990 PF01032 FecCD transport family ISU57_16995 PF00005 ABC transporter ISU57_17000 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU57_17005 PF03222 Tryptophan/tyrosine permease family ISU57_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_17010 PF03466 LysR substrate binding domain ISU57_17015 PF01206 Sulfurtransferase TusA ISU57_17020 PF04143 Sulphur transport ISU57_17025 PF01312 FlhB HrpN YscU SpaS Family ISU57_17030 PF01311 Bacterial export proteins, family 1 ISU57_17035 PF01313 Bacterial export proteins, family 3 ISU57_17040 PF00813 FliP family ISU57_17045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU57_17060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU57_17060 PF18269 T3SS EscN ATPase C-terminal domain ISU57_17065 PF00771 FHIPEP family ISU57_17115 PF03958 Bacterial type II/III secretion system short domain ISU57_17115 PF00263 Bacterial type II and III secretion system protein ISU57_17120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU57_17120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_17120 PF01627 Hpt domain ISU57_17120 PF00672 HAMP domain ISU57_17120 PF00072 Response regulator receiver domain ISU57_17120 PF00512 His Kinase A (phospho-acceptor) domain ISU57_17125 PF00072 Response regulator receiver domain ISU57_17125 PF00196 Bacterial regulatory proteins, luxR family ISU57_17130 PF00375 Sodium:dicarboxylate symporter family ISU57_17135 PF13193 AMP-binding enzyme C-terminal domain ISU57_17135 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU57_17135 PF00501 AMP-binding enzyme ISU57_17140 PF04341 Protein of unknown function, DUF485 ISU57_17145 PF00474 Sodium:solute symporter family ISU57_17155 PF02796 Helix-turn-helix domain of resolvase ISU57_17155 PF00665 Integrase core domain ISU57_17160 PF01695 IstB-like ATP binding protein ISU57_17195 PF01808 AICARFT/IMPCHase bienzyme ISU57_17195 PF02142 MGS-like domain ISU57_17200 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU57_17200 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU57_17200 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU57_17205 PF07356 Protein of unknown function (DUF1481) ISU57_17210 PF00216 Bacterial DNA-binding protein ISU57_17215 PF04222 Protein of unknown function (DUF416) ISU57_17220 PF04493 Endonuclease V ISU57_17225 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU57_17235 PF00293 NUDIX domain ISU57_17235 PF09297 NADH pyrophosphatase zinc ribbon domain ISU57_17240 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU57_17245 PF01964 Radical SAM ThiC family ISU57_17245 PF13667 ThiC-associated domain ISU57_17250 PF02581 Thiamine monophosphate synthase ISU57_17255 PF00899 ThiF family ISU57_17265 PF05690 Thiazole biosynthesis protein ThiG ISU57_17270 PF06968 Biotin and Thiamin Synthesis associated domain ISU57_17270 PF04055 Radical SAM superfamily ISU57_17275 PF01797 Transposase IS200 like ISU57_17280 PF04997 RNA polymerase Rpb1, domain 1 ISU57_17280 PF04998 RNA polymerase Rpb1, domain 5 ISU57_17280 PF00623 RNA polymerase Rpb1, domain 2 ISU57_17280 PF04983 RNA polymerase Rpb1, domain 3 ISU57_17280 PF05000 RNA polymerase Rpb1, domain 4 ISU57_17285 PF04561 RNA polymerase Rpb2, domain 2 ISU57_17285 PF00562 RNA polymerase Rpb2, domain 6 ISU57_17285 PF04560 RNA polymerase Rpb2, domain 7 ISU57_17285 PF04565 RNA polymerase Rpb2, domain 3 ISU57_17285 PF10385 RNA polymerase beta subunit external 1 domain ISU57_17285 PF04563 RNA polymerase beta subunit ISU57_17290 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU57_17290 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU57_17295 PF00466 Ribosomal protein L10 ISU57_17300 PF00687 Ribosomal protein L1p/L10e family ISU57_17305 PF00298 Ribosomal protein L11, RNA binding domain ISU57_17305 PF03946 Ribosomal protein L11, N-terminal domain ISU57_17310 PF02357 Transcription termination factor nusG ISU57_17310 PF00467 KOW motif ISU57_17315 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU57_17320 PF00009 Elongation factor Tu GTP binding domain ISU57_17320 PF03144 Elongation factor Tu domain 2 ISU57_17320 PF03143 Elongation factor Tu C-terminal domain ISU57_17345 PF01695 IstB-like ATP binding protein ISU57_17350 PF02796 Helix-turn-helix domain of resolvase ISU57_17350 PF00665 Integrase core domain ISU57_17355 PF13673 Acetyltransferase (GNAT) domain ISU57_17360 PF00485 Phosphoribulokinase / Uridine kinase family ISU57_17365 PF02237 Biotin protein ligase C terminal domain ISU57_17365 PF03099 Biotin/lipoate A/B protein ligase family ISU57_17365 PF08279 HTH domain ISU57_17370 PF01565 FAD binding domain ISU57_17370 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU57_17400 PF12724 Flavodoxin domain ISU57_17405 PF02386 Cation transport protein ISU57_17415 PF01797 Transposase IS200 like ISU57_17420 PF09186 Domain of unknown function (DUF1949) ISU57_17420 PF01205 Uncharacterized protein family UPF0029 ISU57_17425 PF00557 Metallopeptidase family M24 ISU57_17430 PF00378 Enoyl-CoA hydratase/isomerase ISU57_17430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU57_17430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU57_17435 PF02803 Thiolase, C-terminal domain ISU57_17435 PF00108 Thiolase, N-terminal domain ISU57_17440 PF00175 Oxidoreductase NAD-binding domain ISU57_17440 PF00970 Oxidoreductase FAD-binding domain ISU57_17445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU57_17450 PF02357 Transcription termination factor nusG ISU57_17455 PF00490 Delta-aminolevulinic acid dehydratase ISU57_17460 PF01026 TatD related DNase ISU57_17465 PF01695 IstB-like ATP binding protein ISU57_17470 PF02796 Helix-turn-helix domain of resolvase ISU57_17470 PF00665 Integrase core domain ISU57_17480 PF00902 Sec-independent protein translocase protein (TatC) ISU57_17490 PF02416 mttA/Hcf106 family ISU57_17495 PF03109 ABC1 family ISU57_17500 PF02036 SCP-2 sterol transfer family ISU57_17505 PF01209 ubiE/COQ5 methyltransferase family ISU57_17510 PF02646 RmuC family ISU57_17515 PF09335 SNARE associated Golgi protein ISU57_17520 PF02554 Carbon starvation protein CstA ISU57_17520 PF13722 5TM C-terminal transporter carbon starvation CstA ISU57_17530 PF01048 Phosphorylase superfamily ISU57_17535 PF01738 Dienelactone hydrolase family ISU57_17540 PF08267 Cobalamin-independent synthase, N-terminal domain ISU57_17540 PF01717 Cobalamin-independent synthase, Catalytic domain ISU57_17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_17545 PF03466 LysR substrate binding domain ISU57_17550 PF00892 EamA-like transporter family ISU57_17555 PF03547 Membrane transport protein ISU57_17560 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU57_17565 PF17912 MalK OB fold domain ISU57_17565 PF00005 ABC transporter ISU57_17570 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_17575 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_17580 PF13416 Bacterial extracellular solute-binding protein ISU57_17620 PF00005 ABC transporter ISU57_17625 PF00005 ABC transporter ISU57_17625 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU57_17630 PF02653 Branched-chain amino acid transport system / permease component ISU57_17630 PF11862 Domain of unknown function (DUF3382) ISU57_17635 PF02653 Branched-chain amino acid transport system / permease component ISU57_17640 PF13458 Periplasmic binding protein ISU57_17645 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU57_17650 PF01797 Transposase IS200 like ISU57_17655 PF04545 Sigma-70, region 4 ISU57_17655 PF04542 Sigma-70 region 2 ISU57_17655 PF00140 Sigma-70 factor, region 1.2 ISU57_17660 PF02687 FtsX-like permease family ISU57_17660 PF18075 FtsX extracellular domain ISU57_17665 PF00005 ABC transporter ISU57_17670 PF02881 SRP54-type protein, helical bundle domain ISU57_17670 PF00448 SRP54-type protein, GTPase domain ISU57_17670 PF00448 SRP54-type protein, GTPase domain ISU57_17670 PF02881 SRP54-type protein, helical bundle domain ISU57_17680 PF06611 Protein of unknown function (DUF1145) ISU57_17695 PF07947 YhhN family ISU57_17700 PF00403 Heavy-metal-associated domain ISU57_17705 PF01206 Sulfurtransferase TusA ISU57_17710 PF02592 Putative vitamin uptake transporter ISU57_17715 PF08786 DcrB ISU57_17720 PF02754 Cysteine-rich domain ISU57_17720 PF13183 4Fe-4S dicluster domain ISU57_17725 PF00890 FAD binding domain ISU57_17730 PF01266 FAD dependent oxidoreductase ISU57_17730 PF04324 BFD-like [2Fe-2S] binding domain ISU57_17735 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU57_17750 PF12146 Serine aminopeptidase, S33 ISU57_17755 PF01810 LysE type translocator ISU57_17760 PF01810 LysE type translocator ISU57_17765 PF00270 DEAD/DEAH box helicase ISU57_17765 PF00271 Helicase conserved C-terminal domain ISU57_17765 PF00570 HRDC domain ISU57_17765 PF16124 RecQ zinc-binding ISU57_17765 PF09382 RQC domain ISU57_17770 PF02253 Phospholipase A1 ISU57_17775 PF03061 Thioesterase superfamily ISU57_17780 PF00892 EamA-like transporter family ISU57_17785 PF01544 CorA-like Mg2+ transporter protein ISU57_17790 PF09370 Phosphoenolpyruvate hydrolase-like ISU57_17805 PF13361 UvrD-like helicase C-terminal domain ISU57_17805 PF00580 UvrD/REP helicase N-terminal domain ISU57_17810 PF13419 Haloacid dehalogenase-like hydrolase ISU57_17815 PF02899 Phage integrase, N-terminal SAM-like domain ISU57_17815 PF00589 Phage integrase family ISU57_17820 PF04340 Protein of unknown function, DUF484 ISU57_17825 PF01678 Diaminopimelate epimerase ISU57_17830 PF13627 Prokaryotic lipoprotein-attachment site ISU57_17835 PF01491 Frataxin-like domain ISU57_17840 PF01295 Adenylate cyclase, class-I ISU57_17840 PF12633 Adenylate cyclase NT domain ISU57_17850 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU57_17850 PF03900 Porphobilinogen deaminase, C-terminal domain ISU57_17855 PF02602 Uroporphyrinogen-III synthase HemD ISU57_17860 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU57_17865 PF07719 Tetratricopeptide repeat ISU57_17865 PF07219 HemY protein N-terminus ISU57_17870 PF01797 Transposase IS200 like ISU57_17895 PF00324 Amino acid permease ISU57_17900 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU57_17905 PF06899 WzyE protein, O-antigen assembly polymerase ISU57_17910 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU57_17915 PF01943 Polysaccharide biosynthesis protein ISU57_17920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU57_17930 PF00483 Nucleotidyl transferase ISU57_17935 PF16363 GDP-mannose 4,6 dehydratase ISU57_17940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU57_17940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU57_17940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU57_17945 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU57_17950 PF02706 Chain length determinant protein ISU57_17955 PF00953 Glycosyl transferase family 4 ISU57_17960 PF07497 Rho termination factor, RNA-binding domain ISU57_17960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU57_17960 PF07498 Rho termination factor, N-terminal domain ISU57_17965 PF00085 Thioredoxin ISU57_17970 PF00271 Helicase conserved C-terminal domain ISU57_17970 PF00270 DEAD/DEAH box helicase ISU57_17980 PF13361 UvrD-like helicase C-terminal domain ISU57_17980 PF00580 UvrD/REP helicase N-terminal domain ISU57_18000 PF00872 Transposase, Mutator family ISU57_18010 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_18010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_18015 PF13953 PapC C-terminal domain ISU57_18015 PF13954 PapC N-terminal domain ISU57_18015 PF00577 Outer membrane usher protein ISU57_18025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU57_18025 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU57_18030 PF01320 Colicin immunity protein / pyocin immunity protein ISU57_18055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU57_18055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU57_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_18060 PF03466 LysR substrate binding domain ISU57_18095 PF00291 Pyridoxal-phosphate dependent enzyme ISU57_18095 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU57_18100 PF00920 Dehydratase family ISU57_18105 PF01063 Amino-transferase class IV ISU57_18115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU57_18115 PF00205 Thiamine pyrophosphate enzyme, central domain ISU57_18115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU57_18120 PF08046 IlvGEDA operon leader peptide ISU57_18125 PF01078 Magnesium chelatase, subunit ChlI ISU57_18125 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU57_18130 PF04219 Protein of unknown function, DUF ISU57_18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_18135 PF03466 LysR substrate binding domain ISU57_18140 PF02653 Branched-chain amino acid transport system / permease component ISU57_18145 PF02653 Branched-chain amino acid transport system / permease component ISU57_18150 PF00005 ABC transporter ISU57_18155 PF13407 Periplasmic binding protein domain ISU57_18190 PF01177 Asp/Glu/Hydantoin racemase ISU57_18195 PF00593 TonB dependent receptor ISU57_18195 PF07715 TonB-dependent Receptor Plug Domain ISU57_18200 PF05958 tRNA (Uracil-5-)-methyltransferase ISU57_18205 PF07226 Protein of unknown function (DUF1422) ISU57_18210 PF00440 Bacterial regulatory proteins, tetR family ISU57_18215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU57_18215 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_18220 PF03466 LysR substrate binding domain ISU57_18225 PF08534 Redoxin ISU57_18225 PF00462 Glutaredoxin ISU57_18230 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_18230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU57_18235 PF03544 Gram-negative bacterial TonB protein C-terminal ISU57_18240 PF00529 HlyD membrane-fusion protein of T1SS ISU57_18245 PF00005 ABC transporter ISU57_18245 PF00664 ABC transporter transmembrane region ISU57_18255 PF00593 TonB dependent receptor ISU57_18255 PF07715 TonB-dependent Receptor Plug Domain ISU57_18260 PF14698 Argininosuccinate lyase C-terminal ISU57_18260 PF00206 Lyase ISU57_18265 PF00696 Amino acid kinase family ISU57_18270 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU57_18270 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU57_18275 PF01546 Peptidase family M20/M25/M40 ISU57_18275 PF07687 Peptidase dimerisation domain ISU57_18280 PF00311 Phosphoenolpyruvate carboxylase ISU57_18290 PF02219 Methylenetetrahydrofolate reductase ISU57_18295 PF00742 Homoserine dehydrogenase ISU57_18295 PF00696 Amino acid kinase family ISU57_18295 PF03447 Homoserine dehydrogenase, NAD binding domain ISU57_18305 PF01340 Met Apo-repressor, MetJ ISU57_18310 PF05360 yiaA/B two helix domain ISU57_18315 PF01197 Ribosomal protein L31 ISU57_18320 PF17764 3′ DNA-binding domain (3′BD) ISU57_18320 PF00270 DEAD/DEAH box helicase ISU57_18320 PF00271 Helicase conserved C-terminal domain ISU57_18320 PF18074 Primosomal protein N C-terminal domain ISU57_18320 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU57_18325 PF00356 Bacterial regulatory proteins, lacI family ISU57_18330 PF05036 Sporulation related domain ISU57_18335 PF00227 Proteasome subunit ISU57_18340 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_18340 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_18340 PF07724 AAA domain (Cdc48 subfamily) ISU57_18345 PF01040 UbiA prenyltransferase family ISU57_18350 PF03737 Aldolase/RraA ISU57_18365 PF00529 HlyD membrane-fusion protein of T1SS ISU57_18365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_18370 PF03412 Peptidase C39 family ISU57_18370 PF00005 ABC transporter ISU57_18370 PF00664 ABC transporter transmembrane region ISU57_18375 PF01695 IstB-like ATP binding protein ISU57_18380 PF00665 Integrase core domain ISU57_18380 PF02796 Helix-turn-helix domain of resolvase ISU57_18410 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU57_18420 PF10431 C-terminal, D2-small domain, of ClpB protein ISU57_18420 PF00004 ATPase family associated with various cellular activities (AAA) ISU57_18420 PF07724 AAA domain (Cdc48 subfamily) ISU57_18420 PF17871 AAA lid domain ISU57_18455 PF04717 Type VI secretion system, phage-baseplate injector ISU57_18470 PF05593 RHS Repeat ISU57_18470 PF03527 RHS protein ISU57_18500 PF04717 Type VI secretion system, phage-baseplate injector ISU57_18510 PF05593 RHS Repeat ISU57_18510 PF03527 RHS protein ISU57_18530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU57_18530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU57_18535 PF02311 AraC-like ligand binding domain ISU57_18535 PF12833 Helix-turn-helix domain ISU57_18540 PF05025 RbsD / FucU transport protein family ISU57_18545 PF00294 pfkB family carbohydrate kinase ISU57_18550 PF01791 DeoC/LacD family aldolase ISU57_18555 PF03358 NADPH-dependent FMN reductase ISU57_18560 PF09084 NMT1/THI5 like ISU57_18565 PF00296 Luciferase-like monooxygenase ISU57_18570 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_18575 PF00005 ABC transporter ISU57_18585 PF04221 RelB antitoxin ISU57_18590 PF00860 Permease family ISU57_18595 PF00999 Sodium/hydrogen exchanger family ISU57_18605 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU57_18615 PF00005 ABC transporter ISU57_18620 PF02653 Branched-chain amino acid transport system / permease component ISU57_18630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_18630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_18635 PF00571 CBS domain ISU57_18635 PF01380 SIS domain ISU57_18640 PF02798 Glutathione S-transferase, N-terminal domain ISU57_18655 PF01797 Transposase IS200 like ISU57_18660 PF00313 'Cold-shock' DNA-binding domain ISU57_18665 PF00313 'Cold-shock' DNA-binding domain ISU57_18670 PF05433 Glycine zipper 2TM domain ISU57_18675 PF00753 Metallo-beta-lactamase superfamily ISU57_18680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU57_18680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU57_18685 PF02627 Carboxymuconolactone decarboxylase family ISU57_18690 PF07690 Major Facilitator Superfamily ISU57_18715 PF02954 Bacterial regulatory protein, Fis family ISU57_18720 PF01207 Dihydrouridine synthase (Dus) ISU57_18730 PF00474 Sodium:solute symporter family ISU57_18735 PF06196 Protein of unknown function (DUF997) ISU57_18745 PF02785 Biotin carboxylase C-terminal domain ISU57_18745 PF00289 Biotin carboxylase, N-terminal domain ISU57_18745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU57_18750 PF00364 Biotin-requiring enzyme ISU57_18755 PF01220 Dehydroquinase class II ISU57_18760 PF01794 Ferric reductase like transmembrane component ISU57_18765 PF00174 Oxidoreductase molybdopterin binding domain ISU57_18770 PF08240 Alcohol dehydrogenase GroES-like domain ISU57_18770 PF00107 Zinc-binding dehydrogenase ISU57_18775 PF17157 Gammaproteobacterial periplasmic sensor domain ISU57_18775 PF00990 Diguanylate cyclase, GGDEF domain ISU57_18775 PF00563 EAL domain ISU57_18785 PF04085 rod shape-determining protein MreC ISU57_18790 PF04093 rod shape-determining protein MreD ISU57_18795 PF02545 Maf-like protein ISU57_18800 PF00575 S1 RNA binding domain ISU57_18800 PF10150 Ribonuclease E/G family ISU57_18805 PF13502 AsmA-like C-terminal region ISU57_18805 PF13116 Protein of unknown function ISU57_18810 PF00795 Carbon-nitrogen hydrolase ISU57_18815 PF01523 Putative modulator of DNA gyrase ISU57_18820 PF14431 YwqJ-like deaminase ISU57_18820 PF18807 Tripartite Tc toxins repeat ISU57_18825 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU57_18825 PF18807 Tripartite Tc toxins repeat ISU57_18845 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU57_18845 PF03534 Salmonella virulence plasmid 65kDa B protein ISU57_18845 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU57_18850 PF18413 Neuraminidase-like domain ISU57_18850 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU57_18860 PF03466 LysR substrate binding domain ISU57_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_18865 PF03466 LysR substrate binding domain ISU57_18870 PF07869 Protein of unknown function (DUF1656) ISU57_18875 PF13533 Biotin-lipoyl like ISU57_18880 PF04632 Fusaric acid resistance protein family ISU57_18895 PF01337 Barstar (barnase inhibitor) ISU57_18900 PF04751 Protein of unknown function (DUF615) ISU57_18905 PF01523 Putative modulator of DNA gyrase ISU57_18915 PF07361 Cytochrome b562 ISU57_18920 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU57_18920 PF14760 Rnk N-terminus ISU57_18925 PF11941 Domain of unknown function (DUF3459) ISU57_18925 PF00128 Alpha amylase, catalytic domain ISU57_18930 PF02378 Phosphotransferase system, EIIC ISU57_18930 PF00367 phosphotransferase system, EIIB ISU57_18935 PF00356 Bacterial regulatory proteins, lacI family ISU57_18945 PF01042 Endoribonuclease L-PSP ISU57_18950 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU57_18950 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU57_18955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU57_18955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU57_18960 PF00381 PTS HPr component phosphorylation site ISU57_18965 PF03668 P-loop ATPase protein family ISU57_18970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU57_18980 PF04963 Sigma-54 factor, core binding domain ISU57_18980 PF04552 Sigma-54, DNA binding domain ISU57_18980 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU57_18985 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU57_18985 PF00005 ABC transporter ISU57_18990 PF03968 OstA-like protein ISU57_18995 PF06835 Lipopolysaccharide-assembly, LptC-related ISU57_19005 PF00571 CBS domain ISU57_19005 PF01380 SIS domain ISU57_19015 PF00005 ABC transporter ISU57_19020 PF02405 Permease MlaE ISU57_19025 PF02470 MlaD protein ISU57_19030 PF05494 MlaC protein ISU57_19035 PF13466 STAS domain ISU57_19040 PF01722 BolA-like protein ISU57_19045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU57_19050 PF13180 PDZ domain ISU57_19055 PF01797 Transposase IS200 like ISU57_19060 PF00595 PDZ domain ISU57_19060 PF13180 PDZ domain ISU57_19065 PF06295 Protein of unknown function (DUF1043) ISU57_19070 PF03969 AFG1-like ATPase ISU57_19075 PF00572 Ribosomal protein L13 ISU57_19080 PF00380 Ribosomal protein S9/S16 ISU57_19090 PF02798 Glutathione S-transferase, N-terminal domain ISU57_19090 PF00043 Glutathione S-transferase, C-terminal domain ISU57_19095 PF04386 Stringent starvation protein B ISU57_19105 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU57_19105 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU57_19110 PF04898 Glutamate synthase central domain ISU57_19110 PF00310 Glutamine amidotransferases class-II ISU57_19110 PF01645 Conserved region in glutamate synthase ISU57_19110 PF01493 GXGXG motif ISU57_19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_19120 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU57_19120 PF01627 Hpt domain ISU57_19120 PF00512 His Kinase A (phospho-acceptor) domain ISU57_19120 PF00072 Response regulator receiver domain ISU57_19120 PF00989 PAS fold ISU57_19130 PF00912 Transglycosylase ISU57_19135 PF04972 BON domain ISU57_19140 PF13580 SIS domain ISU57_19145 PF02021 Uncharacterised protein family UPF0102 ISU57_19155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU57_19165 PF02678 Pirin ISU57_19165 PF17954 Quercetinase C-terminal cupin domain ISU57_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_19170 PF03466 LysR substrate binding domain ISU57_19180 PF01695 IstB-like ATP binding protein ISU57_19185 PF02796 Helix-turn-helix domain of resolvase ISU57_19185 PF00665 Integrase core domain ISU57_19190 PF09500 Putative thioesterase (yiiD_Cterm) ISU57_19190 PF00583 Acetyltransferase (GNAT) family ISU57_19195 PF05170 AsmA family ISU57_19200 PF00860 Permease family ISU57_19205 PF03616 Sodium/glutamate symporter ISU57_19215 PF00270 DEAD/DEAH box helicase ISU57_19215 PF00271 Helicase conserved C-terminal domain ISU57_19215 PF17191 RecG wedge domain ISU57_19220 PF12105 SpoU, rRNA methylase, C-terminal ISU57_19220 PF00588 SpoU rRNA Methylase family ISU57_19225 PF04607 Region found in RelA / SpoT proteins ISU57_19225 PF13291 ACT domain ISU57_19225 PF02824 TGS domain ISU57_19230 PF01192 RNA polymerase Rpb6 ISU57_19235 PF00625 Guanylate kinase ISU57_19240 PF01653 NAD-dependent DNA ligase adenylation domain ISU57_19240 PF03120 NAD-dependent DNA ligase OB-fold domain ISU57_19245 PF03458 UPF0126 domain ISU57_19250 PF03755 YicC-like family, N-terminal region ISU57_19250 PF08340 Domain of unknown function (DUF1732) ISU57_19255 PF01138 3' exoribonuclease family, domain 1 ISU57_19255 PF03725 3' exoribonuclease family, domain 2 ISU57_19260 PF00156 Phosphoribosyl transferase domain ISU57_19265 PF00440 Bacterial regulatory proteins, tetR family ISU57_19270 PF00692 dUTPase ISU57_19275 PF04127 DNA / pantothenate metabolism flavoprotein ISU57_19275 PF02441 Flavoprotein ISU57_19280 PF04002 RadC-like JAB domain ISU57_19285 PF00830 Ribosomal L28 family ISU57_19290 PF00471 Ribosomal protein L33 ISU57_19295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU57_19295 PF06827 Zinc finger found in FPG and IleRS ISU57_19295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU57_19300 PF01467 Cytidylyltransferase-like ISU57_19305 PF00535 Glycosyl transferase family 2 ISU57_19310 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU57_19315 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU57_19320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU57_19325 PF01370 NAD dependent epimerase/dehydratase family ISU57_19330 PF00155 Aminotransferase class I and II ISU57_19335 PF08240 Alcohol dehydrogenase GroES-like domain ISU57_19335 PF00107 Zinc-binding dehydrogenase ISU57_19345 PF01551 Peptidase family M23 ISU57_19350 PF01676 Metalloenzyme superfamily ISU57_19350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU57_19355 PF00581 Rhodanese-like domain ISU57_19360 PF00462 Glutaredoxin ISU57_19365 PF02556 Preprotein translocase subunit SecB ISU57_19370 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU57_19370 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU57_19375 PF06426 Serine acetyltransferase, N-terminal ISU57_19375 PF00132 Bacterial transferase hexapeptide (six repeats) ISU57_19380 PF00588 SpoU rRNA Methylase family ISU57_19385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU57_19385 PF02805 Metal binding domain of Ada ISU57_19385 PF12833 Helix-turn-helix domain ISU57_19385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU57_19390 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU57_19390 PF00672 HAMP domain ISU57_19390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_19390 PF00512 His Kinase A (phospho-acceptor) domain ISU57_19395 PF00072 Response regulator receiver domain ISU57_19395 PF00486 Transcriptional regulatory protein, C terminal ISU57_19400 PF07813 LTXXQ motif family protein ISU57_19410 PF04754 Putative transposase, YhgA-like ISU57_19415 PF16916 Dimerisation domain of Zinc Transporter ISU57_19415 PF01545 Cation efflux family ISU57_19420 PF00365 Phosphofructokinase ISU57_19435 PF00939 Sodium:sulfate symporter transmembrane region ISU57_19440 PF03737 Aldolase/RraA ISU57_19445 PF02585 GlcNAc-PI de-N-acetylase ISU57_19450 PF03466 LysR substrate binding domain ISU57_19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU57_19455 PF00121 Triosephosphate isomerase ISU57_19460 PF07305 Protein of unknown function (DUF1454) ISU57_19465 PF05656 Protein of unknown function (DUF805) ISU57_19470 PF00970 Oxidoreductase FAD-binding domain ISU57_19470 PF00175 Oxidoreductase NAD-binding domain ISU57_19475 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU57_19480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_19480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_19485 PF00230 Major intrinsic protein ISU57_19490 PF06005 Cell division protein ZapB ISU57_19495 PF01797 Transposase IS200 like ISU57_19500 PF00665 Integrase core domain ISU57_19500 PF02796 Helix-turn-helix domain of resolvase ISU57_19505 PF01695 IstB-like ATP binding protein ISU57_19515 PF02661 Fic/DOC family ISU57_19520 PF01381 Helix-turn-helix ISU57_19520 PF13521 AAA domain ISU57_19525 PF18073 Rubredoxin metal binding domain ISU57_19530 PF18429 Domain of unknown function (DUF5609) ISU57_19535 PF10144 Bacterial virulence factor haemolysin ISU57_19540 PF01048 Phosphorylase superfamily ISU57_19545 PF01676 Metalloenzyme superfamily ISU57_19555 PF01791 DeoC/LacD family aldolase ISU57_19565 PF01773 Na+ dependent nucleoside transporter N-terminus ISU57_19565 PF07670 Nucleoside recognition ISU57_19565 PF07662 Na+ dependent nucleoside transporter C-terminus ISU57_19570 PF01026 TatD related DNase ISU57_19575 PF01734 Patatin-like phospholipase ISU57_19580 PF07043 Protein of unknown function (DUF1328) ISU57_19585 PF04972 BON domain ISU57_19590 PF00009 Elongation factor Tu GTP binding domain ISU57_19590 PF16658 Class II release factor RF3, C-terminal domain ISU57_19590 PF03144 Elongation factor Tu domain 2 ISU57_19595 PF00583 Acetyltransferase (GNAT) family ISU57_19600 PF03603 DNA polymerase III psi subunit ISU57_19605 PF05175 Methyltransferase small domain ISU57_19605 PF08468 Methyltransferase small domain N-terminal ISU57_19615 PF07256 Protein of unknown function (DUF1435) ISU57_19620 PF00990 Diguanylate cyclase, GGDEF domain ISU57_19625 PF01095 Pectinesterase ISU57_19640 PF00873 AcrB/AcrD/AcrF family ISU57_19645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU57_19660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU57_19665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU57_19665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU57_19680 PF00005 ABC transporter ISU57_19685 PF02653 Branched-chain amino acid transport system / permease component ISU57_19690 PF02653 Branched-chain amino acid transport system / permease component ISU57_19695 PF13407 Periplasmic binding protein domain ISU57_19700 PF01791 DeoC/LacD family aldolase ISU57_19705 PF03992 Antibiotic biosynthesis monooxygenase ISU57_19710 PF10696 Protein of unknown function (DUF2501) ISU57_19715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU57_19715 PF02896 PEP-utilising enzyme, TIM barrel domain ISU57_19715 PF00391 PEP-utilising enzyme, mobile domain ISU57_19715 PF00381 PTS HPr component phosphorylation site ISU57_19715 PF05524 PEP-utilising enzyme, N-terminal ISU57_19725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU57_19730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU57_19735 PF12833 Helix-turn-helix domain ISU57_19745 PF05987 Bacterial protein of unknown function (DUF898) ISU57_19785 PF01555 DNA methylase ISU57_19800 PF12102 Domain of unknown function (DUF3578) ISU57_19800 PF07728 AAA domain (dynein-related subfamily) ISU57_19805 PF02796 Helix-turn-helix domain of resolvase ISU57_19805 PF00665 Integrase core domain ISU57_19810 PF01695 IstB-like ATP binding protein ISU57_19815 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU57_19820 PF03631 Virulence factor BrkB ISU57_19825 PF13419 Haloacid dehalogenase-like hydrolase ISU57_19830 PF00009 Elongation factor Tu GTP binding domain ISU57_19830 PF03144 Elongation factor Tu domain 2 ISU57_19830 PF00679 Elongation factor G C-terminus ISU57_19835 PF00120 Glutamine synthetase, catalytic domain ISU57_19835 PF03951 Glutamine synthetase, beta-Grasp domain ISU57_19840 PF00512 His Kinase A (phospho-acceptor) domain ISU57_19840 PF00989 PAS fold ISU57_19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU57_19845 PF02954 Bacterial regulatory protein, Fis family ISU57_19845 PF00158 Sigma-54 interaction domain ISU57_19845 PF00072 Response regulator receiver domain ISU57_19850 PF06969 HemN C-terminal domain ISU57_19850 PF04055 Radical SAM superfamily ISU57_19855 PF04220 Der GTPase activator (YihI) ISU57_19860 PF01926 50S ribosome-binding GTPase ISU57_19865 PF01797 Transposase IS200 like ISU57_19870 PF01797 Transposase IS200 like ISU57_19875 PF01612 3'-5' exonuclease ISU57_19875 PF00476 DNA polymerase family A ISU57_19875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU57_19875 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU57_19880 PF01323 DSBA-like thioredoxin domain ISU57_19885 PF01636 Phosphotransferase enzyme family ISU57_19890 PF06288 Protein of unknown function (DUF1040) ISU57_19895 PF12804 MobA-like NTP transferase domain ISU57_19900 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU57_19905 PF00872 Transposase, Mutator family ISU57_19930 PF00392 Bacterial regulatory proteins, gntR family ISU57_19930 PF07729 FCD domain ISU57_19935 PF07690 Major Facilitator Superfamily ISU57_19950 PF00294 pfkB family carbohydrate kinase ISU57_19955 PF05025 RbsD / FucU transport protein family ISU57_19960 PF02705 K+ potassium transporter ISU57_19965 PF12592 Protein of unknown function (DUF3763) ISU57_19965 PF17868 AAA lid domain ISU57_19965 PF07728 AAA domain (dynein-related subfamily) ISU57_19970 PF05762 VWA domain containing CoxE-like protein ISU57_19975 PF03590 Aspartate-ammonia ligase ISU57_19980 PF01037 Lrp/AsnC ligand binding domain ISU57_19985 PF00258 Flavodoxin ISU57_19990 PF01134 Glucose inhibited division protein A ISU57_19990 PF13932 GidA associated domain ISU57_19995 PF02527 rRNA small subunit methyltransferase G ISU57_20000 PF03899 ATP synthase I chain ISU57_20005 PF00119 ATP synthase A chain ISU57_20010 PF00137 ATP synthase subunit C ISU57_20015 PF00430 ATP synthase B/B' CF(0) ISU57_20020 PF00213 ATP synthase delta (OSCP) subunit ISU57_20025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU57_20025 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU57_20025 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU57_20030 PF00231 ATP synthase ISU57_20035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU57_20035 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU57_20040 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU57_20040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU57_20045 PF00132 Bacterial transferase hexapeptide (six repeats) ISU57_20045 PF12804 MobA-like NTP transferase domain ISU57_20050 PF01380 SIS domain ISU57_20055 PF12849 PBP superfamily domain ISU57_20060 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_20065 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_20070 PF00005 ABC transporter ISU57_20075 PF01895 PhoU domain ISU57_20085 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU57_20090 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_20095 PF00528 Binding-protein-dependent transport system inner membrane component ISU57_20100 PF13419 Haloacid dehalogenase-like hydrolase ISU57_20110 PF00860 Permease family ISU57_20130 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU57_20130 PF07055 Enoyl reductase FAD binding domain ISU57_20130 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU57_20135 PF01926 50S ribosome-binding GTPase ISU57_20135 PF10396 GTP-binding protein TrmE N-terminus ISU57_20135 PF12631 MnmE helical domain ISU57_20140 PF14849 YidC periplasmic domain ISU57_20140 PF02096 60Kd inner membrane protein ISU57_20145 PF01809 Putative membrane protein insertion efficiency factor ISU57_20150 PF00825 Ribonuclease P ISU57_20155 PF00468 Ribosomal protein L34