locus-tag class description ISU59_00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU59_00005 PF11638 DnaA N-terminal domain ISU59_00005 PF00308 Bacterial dnaA protein ISU59_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU59_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU59_00010 PF02767 DNA polymerase III beta subunit, central domain ISU59_00015 PF02463 RecF/RecN/SMC N terminal domain ISU59_00020 PF01751 Toprim domain ISU59_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ISU59_00020 PF00204 DNA gyrase B ISU59_00020 PF18053 DNA gyrase B subunit insert domain ISU59_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_00035 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU59_00040 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_00040 PF13291 ACT domain ISU59_00050 PF07119 Protein of unknown function (DUF1375) ISU59_00055 PF00011 Hsp20/alpha crystallin family ISU59_00060 PF00011 Hsp20/alpha crystallin family ISU59_00065 PF06826 Predicted Permease Membrane Region ISU59_00065 PF02080 TrkA-C domain ISU59_00070 PF00155 Aminotransferase class I and II ISU59_00080 PF00128 Alpha amylase, catalytic domain ISU59_00085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU59_00085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU59_00095 PF13488 Glycine zipper ISU59_00095 PF00691 OmpA family ISU59_00105 PF03352 Methyladenine glycosylase ISU59_00110 PF02091 Glycyl-tRNA synthetase alpha subunit ISU59_00115 PF02092 Glycyl-tRNA synthetase beta subunit ISU59_00115 PF05746 DALR anticodon binding domain ISU59_00125 PF11254 Protein of unknown function (DUF3053) ISU59_00130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU59_00130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU59_00130 PF02378 Phosphotransferase system, EIIC ISU59_00135 PF01232 Mannitol dehydrogenase Rossmann domain ISU59_00135 PF08125 Mannitol dehydrogenase C-terminal domain ISU59_00140 PF05068 Mannitol repressor ISU59_00145 PF10928 Protein of unknown function (DUF2810) ISU59_00160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU59_00160 PF02203 Tar ligand binding domain homologue ISU59_00160 PF00672 HAMP domain ISU59_00165 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU59_00165 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU59_00170 PF02634 FdhD/NarQ family ISU59_00180 PF09163 Formate dehydrogenase N, transmembrane ISU59_00180 PF13247 4Fe-4S dicluster domain ISU59_00185 PF01292 Prokaryotic cytochrome b561 ISU59_00190 PF04216 Protein involved in formate dehydrogenase formation ISU59_00195 PF03841 L-seryl-tRNA selenium transferase ISU59_00195 PF12390 Selenocysteine synthase N terminal ISU59_00200 PF09107 Elongation factor SelB, winged helix ISU59_00200 PF03144 Elongation factor Tu domain 2 ISU59_00200 PF09106 Elongation factor SelB, winged helix ISU59_00200 PF00009 Elongation factor Tu GTP binding domain ISU59_00230 PF07690 Major Facilitator Superfamily ISU59_00245 PF01757 Acyltransferase family ISU59_00250 PF00419 Fimbrial protein ISU59_00260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_00260 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_00270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_00270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_00280 PF13407 Periplasmic binding protein domain ISU59_00285 PF00005 ABC transporter ISU59_00290 PF02653 Branched-chain amino acid transport system / permease component ISU59_00295 PF12833 Helix-turn-helix domain ISU59_00305 PF14659 Phage integrase, N-terminal SAM-like domain ISU59_00305 PF00589 Phage integrase family ISU59_00305 PF13356 Arm DNA-binding domain ISU59_00315 PF04606 Ogr/Delta-like zinc finger ISU59_00350 PF00005 ABC transporter ISU59_00355 PF01032 FecCD transport family ISU59_00360 PF01032 FecCD transport family ISU59_00365 PF01497 Periplasmic binding protein ISU59_00380 PF00156 Phosphoribosyl transferase domain ISU59_00385 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_00390 PF01175 Urocanase Rossmann-like domain ISU59_00390 PF17391 Urocanase N-terminal domain ISU59_00390 PF17392 Urocanase C-terminal domain ISU59_00395 PF00221 Aromatic amino acid lyase ISU59_00400 PF00324 Amino acid permease ISU59_00405 PF12146 Serine aminopeptidase, S33 ISU59_00410 PF00884 Sulfatase ISU59_00410 PF08019 Phosphoethanolamine transferase EptA/EptB ISU59_00415 PF00196 Bacterial regulatory proteins, luxR family ISU59_00415 PF00072 Response regulator receiver domain ISU59_00425 PF00665 Integrase core domain ISU59_00425 PF02796 Helix-turn-helix domain of resolvase ISU59_00430 PF01695 IstB-like ATP binding protein ISU59_00435 PF00132 Bacterial transferase hexapeptide (six repeats) ISU59_00440 PF08501 Shikimate dehydrogenase substrate binding domain ISU59_00440 PF01488 Shikimate / quinate 5-dehydrogenase ISU59_00440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU59_00445 PF01300 Telomere recombination ISU59_00450 PF01396 Topoisomerase DNA binding C4 zinc finger ISU59_00455 PF04361 Protein of unknown function (DUF494) ISU59_00460 PF02481 DNA recombination-mediator protein A ISU59_00460 PF17782 DprA winged helix domain ISU59_00465 PF01327 Polypeptide deformylase ISU59_00470 PF02911 Formyl transferase, C-terminal domain ISU59_00470 PF00551 Formyl transferase ISU59_00475 PF01029 NusB family ISU59_00475 PF01189 16S rRNA methyltransferase RsmB/F ISU59_00480 PF02254 TrkA-N domain ISU59_00480 PF02080 TrkA-C domain ISU59_00485 PF01741 Large-conductance mechanosensitive channel, MscL ISU59_00490 PF03889 Alternative ribosome-rescue factor A ISU59_00495 PF13411 MerR HTH family regulatory protein ISU59_00500 PF01196 Ribosomal protein L17 ISU59_00505 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU59_00505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU59_00505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU59_00510 PF01479 S4 domain ISU59_00510 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU59_00515 PF00411 Ribosomal protein S11 ISU59_00520 PF00416 Ribosomal protein S13/S18 ISU59_00525 PF00444 Ribosomal protein L36 ISU59_00530 PF00344 SecY translocase ISU59_00535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU59_00540 PF00327 Ribosomal protein L30p/L7e ISU59_00545 PF00333 Ribosomal protein S5, N-terminal domain ISU59_00545 PF03719 Ribosomal protein S5, C-terminal domain ISU59_00550 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU59_00555 PF00347 Ribosomal protein L6 ISU59_00560 PF00410 Ribosomal protein S8 ISU59_00565 PF00253 Ribosomal protein S14p/S29e ISU59_00570 PF00673 ribosomal L5P family C-terminus ISU59_00570 PF00281 Ribosomal protein L5 ISU59_00575 PF00467 KOW motif ISU59_00575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU59_00580 PF00238 Ribosomal protein L14p/L23e ISU59_00585 PF00366 Ribosomal protein S17 ISU59_00590 PF00831 Ribosomal L29 protein ISU59_00595 PF00252 Ribosomal protein L16p/L10e ISU59_00600 PF00189 Ribosomal protein S3, C-terminal domain ISU59_00600 PF07650 KH domain ISU59_00605 PF00237 Ribosomal protein L22p/L17e ISU59_00610 PF00203 Ribosomal protein S19 ISU59_00615 PF03947 Ribosomal Proteins L2, C-terminal domain ISU59_00615 PF00181 Ribosomal Proteins L2, RNA binding domain ISU59_00620 PF00276 Ribosomal protein L23 ISU59_00625 PF00573 Ribosomal protein L4/L1 family ISU59_00630 PF00297 Ribosomal protein L3 ISU59_00635 PF00338 Ribosomal protein S10p/S20e ISU59_00640 PF00210 Ferritin-like domain ISU59_00645 PF04324 BFD-like [2Fe-2S] binding domain ISU59_00650 PF01797 Transposase IS200 like ISU59_00655 PF03144 Elongation factor Tu domain 2 ISU59_00655 PF03143 Elongation factor Tu C-terminal domain ISU59_00655 PF00009 Elongation factor Tu GTP binding domain ISU59_00660 PF03764 Elongation factor G, domain IV ISU59_00660 PF03144 Elongation factor Tu domain 2 ISU59_00660 PF14492 Elongation Factor G, domain II ISU59_00660 PF00009 Elongation factor Tu GTP binding domain ISU59_00660 PF00679 Elongation factor G C-terminus ISU59_00665 PF00177 Ribosomal protein S7p/S5e ISU59_00670 PF00164 Ribosomal protein S12/S23 ISU59_00675 PF04077 DsrH like protein ISU59_00680 PF02635 DsrE/DsrF-like family ISU59_00685 PF02635 DsrE/DsrF-like family ISU59_00690 PF13309 HTH domain ISU59_00690 PF08348 YheO-like PAS domain ISU59_00695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU59_00695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU59_00700 PF04102 SlyX ISU59_00705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU59_00710 PF09526 Probable metal-binding protein (DUF2387) ISU59_00715 PF00999 Sodium/hydrogen exchanger family ISU59_00715 PF02254 TrkA-N domain ISU59_00720 PF02525 Flavodoxin-like fold ISU59_00730 PF00535 Glycosyl transferase family 2 ISU59_00740 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU59_00745 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_00750 PF00005 ABC transporter ISU59_00755 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU59_00760 PF01810 LysE type translocator ISU59_00765 PF00561 alpha/beta hydrolase fold ISU59_00770 PF06794 Uncharacterised protein family (UPF0270) ISU59_00775 PF00485 Phosphoribulokinase / Uridine kinase family ISU59_00785 PF02566 OsmC-like protein ISU59_00790 PF00027 Cyclic nucleotide-binding domain ISU59_00790 PF13545 Crp-like helix-turn-helix domain ISU59_00795 PF12805 FUSC-like inner membrane protein yccS ISU59_00800 PF00202 Aminotransferase class-III ISU59_00805 PF00117 Glutamine amidotransferase class-I ISU59_00810 PF05872 Bacterial protein of unknown function (DUF853) ISU59_00815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU59_00820 PF02056 Family 4 glycosyl hydrolase ISU59_00820 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU59_00825 PF00356 Bacterial regulatory proteins, lacI family ISU59_00835 PF07690 Major Facilitator Superfamily ISU59_00840 PF07969 Amidohydrolase family ISU59_00845 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_00845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU59_00845 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU59_00845 PF04324 BFD-like [2Fe-2S] binding domain ISU59_00845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU59_00850 PF13806 Rieske-like [2Fe-2S] domain ISU59_00855 PF01226 Formate/nitrite transporter ISU59_00865 PF01695 IstB-like ATP binding protein ISU59_00870 PF00665 Integrase core domain ISU59_00870 PF02796 Helix-turn-helix domain of resolvase ISU59_00880 PF00579 tRNA synthetases class I (W and Y) ISU59_00885 PF13419 Haloacid dehalogenase-like hydrolase ISU59_00890 PF00834 Ribulose-phosphate 3 epimerase family ISU59_00895 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU59_00900 PF05036 Sporulation related domain ISU59_00905 PF01761 3-dehydroquinate synthase ISU59_00910 PF01202 Shikimate kinase ISU59_00915 PF00263 Bacterial type II and III secretion system protein ISU59_00915 PF03958 Bacterial type II/III secretion system short domain ISU59_00940 PF00905 Penicillin binding protein transpeptidase domain ISU59_00940 PF00912 Transglycosylase ISU59_00940 PF17092 Penicillin-binding protein OB-like domain ISU59_00945 PF00293 NUDIX domain ISU59_00950 PF07095 Intracellular growth attenuator protein IgaA ISU59_00955 PF13419 Haloacid dehalogenase-like hydrolase ISU59_00960 PF01479 S4 domain ISU59_00965 PF01430 Hsp33 protein ISU59_00970 PF01293 Phosphoenolpyruvate carboxykinase ISU59_00975 PF00672 HAMP domain ISU59_00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_00975 PF00512 His Kinase A (phospho-acceptor) domain ISU59_00980 PF00486 Transcriptional regulatory protein, C terminal ISU59_00980 PF00072 Response regulator receiver domain ISU59_00985 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU59_00985 PF03449 Transcription elongation factor, N-terminal ISU59_00990 PF09371 Tex-like protein N-terminal domain ISU59_00990 PF17674 HHH domain ISU59_00990 PF16921 Tex protein YqgF-like domain ISU59_00990 PF00575 S1 RNA binding domain ISU59_00995 PF04023 FeoA domain ISU59_01000 PF07664 Ferrous iron transport protein B C terminus ISU59_01000 PF07670 Nucleoside recognition ISU59_01000 PF02421 Ferrous iron transport protein B ISU59_01000 PF17910 FeoB cytosolic helical domain ISU59_01005 PF09012 FeoC like transcriptional regulator ISU59_01010 PF07338 Protein of unknown function (DUF1471) ISU59_01015 PF00561 alpha/beta hydrolase fold ISU59_01020 PF00156 Phosphoribosyl transferase domain ISU59_01025 PF01106 NifU-like domain ISU59_01025 PF01521 Iron-sulphur cluster biosynthesis ISU59_01030 PF02446 4-alpha-glucanotransferase ISU59_01035 PF00343 Carbohydrate phosphorylase ISU59_01040 PF00343 Carbohydrate phosphorylase ISU59_01045 PF17874 MalT-like TPR region ISU59_01045 PF00196 Bacterial regulatory proteins, luxR family ISU59_01050 PF00581 Rhodanese-like domain ISU59_01055 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU59_01055 PF01694 Rhomboid family ISU59_01060 PF00455 DeoR C terminal sensor domain ISU59_01060 PF08220 DeoR-like helix-turn-helix domain ISU59_01085 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU59_01085 PF01266 FAD dependent oxidoreductase ISU59_01090 PF00343 Carbohydrate phosphorylase ISU59_01095 PF00534 Glycosyl transferases group 1 ISU59_01095 PF08323 Starch synthase catalytic domain ISU59_01105 PF18390 Glycogen debranching enzyme C-terminal domain ISU59_01105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU59_01105 PF00128 Alpha amylase, catalytic domain ISU59_01110 PF00128 Alpha amylase, catalytic domain ISU59_01110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU59_01110 PF02806 Alpha amylase, C-terminal all-beta domain ISU59_01150 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU59_01150 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU59_01155 PF01914 MarC family integral membrane protein ISU59_01170 PF01202 Shikimate kinase ISU59_01175 PF02447 GntP family permease ISU59_01180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU59_01180 PF00356 Bacterial regulatory proteins, lacI family ISU59_01185 PF17954 Quercetinase C-terminal cupin domain ISU59_01185 PF02678 Pirin ISU59_01195 PF00486 Transcriptional regulatory protein, C terminal ISU59_01195 PF00072 Response regulator receiver domain ISU59_01205 PF01116 Fructose-bisphosphate aldolase class-II ISU59_01215 PF13407 Periplasmic binding protein domain ISU59_01220 PF02653 Branched-chain amino acid transport system / permease component ISU59_01225 PF00005 ABC transporter ISU59_01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_01230 PF00512 His Kinase A (phospho-acceptor) domain ISU59_01230 PF08448 PAS fold ISU59_01230 PF13188 PAS domain ISU59_01230 PF00072 Response regulator receiver domain ISU59_01240 PF01384 Phosphate transporter family ISU59_01245 PF01797 Transposase IS200 like ISU59_01250 PF10625 Universal stress protein B (UspB) ISU59_01255 PF00582 Universal stress protein family ISU59_01260 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU59_01260 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU59_01265 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU59_01265 PF00413 Matrixin ISU59_01265 PF08548 Peptidase M10 serralysin C terminal ISU59_01270 PF04445 Putative SAM-dependent methyltransferase ISU59_01275 PF01432 Peptidase family M3 ISU59_01280 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU59_01285 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_01285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU59_01290 PF13556 PucR C-terminal helix-turn-helix domain ISU59_01290 PF17853 GGDEF-like domain ISU59_01290 PF05651 Putative sugar diacid recognition ISU59_01300 PF02447 GntP family permease ISU59_01305 PF02595 Glycerate kinase family ISU59_01330 PF03631 Virulence factor BrkB ISU59_01335 PF02611 CDP-diacylglycerol pyrophosphatase ISU59_01340 PF05170 AsmA family ISU59_01345 PF00563 EAL domain ISU59_01350 PF01361 Tautomerase enzyme ISU59_01355 PF00294 pfkB family carbohydrate kinase ISU59_01360 PF05193 Peptidase M16 inactive domain ISU59_01360 PF00675 Insulinase (Peptidase family M16) ISU59_01365 PF00375 Sodium:dicarboxylate symporter family ISU59_01375 PF06917 Periplasmic pectate lyase ISU59_01380 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU59_01385 PF00672 HAMP domain ISU59_01385 PF00990 Diguanylate cyclase, GGDEF domain ISU59_01385 PF17154 Gammaproteobacterial periplasmic sensor domain ISU59_01385 PF00563 EAL domain ISU59_01390 PF01270 Glycosyl hydrolases family 8 ISU59_01395 PF00005 ABC transporter ISU59_01395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_01400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_01400 PF00005 ABC transporter ISU59_01405 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU59_01405 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_01410 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_01415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_01420 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU59_01420 PF17287 POTRA domain ISU59_01420 PF08479 POTRA domain, ShlB-type ISU59_01425 PF13332 Hemagglutinin repeat ISU59_01425 PF05594 Haemagluttinin repeat ISU59_01425 PF05860 haemagglutination activity domain ISU59_01425 PF04829 Pre-toxin domain with VENN motif ISU59_01435 PF07690 Major Facilitator Superfamily ISU59_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_01440 PF05231 MASE1 ISU59_01440 PF07730 Histidine kinase ISU59_01445 PF01695 IstB-like ATP binding protein ISU59_01450 PF00665 Integrase core domain ISU59_01450 PF02796 Helix-turn-helix domain of resolvase ISU59_01475 PF00872 Transposase, Mutator family ISU59_01480 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU59_01485 PF12804 MobA-like NTP transferase domain ISU59_01490 PF06288 Protein of unknown function (DUF1040) ISU59_01495 PF01636 Phosphotransferase enzyme family ISU59_01500 PF01323 DSBA-like thioredoxin domain ISU59_01505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU59_01505 PF00476 DNA polymerase family A ISU59_01505 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU59_01505 PF01612 3'-5' exonuclease ISU59_01510 PF01797 Transposase IS200 like ISU59_01515 PF01797 Transposase IS200 like ISU59_01520 PF01926 50S ribosome-binding GTPase ISU59_01525 PF04220 Der GTPase activator (YihI) ISU59_01530 PF06969 HemN C-terminal domain ISU59_01530 PF04055 Radical SAM superfamily ISU59_01535 PF00072 Response regulator receiver domain ISU59_01535 PF02954 Bacterial regulatory protein, Fis family ISU59_01535 PF00158 Sigma-54 interaction domain ISU59_01540 PF00512 His Kinase A (phospho-acceptor) domain ISU59_01540 PF00989 PAS fold ISU59_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_01545 PF00120 Glutamine synthetase, catalytic domain ISU59_01545 PF03951 Glutamine synthetase, beta-Grasp domain ISU59_01550 PF03144 Elongation factor Tu domain 2 ISU59_01550 PF00009 Elongation factor Tu GTP binding domain ISU59_01550 PF00679 Elongation factor G C-terminus ISU59_01555 PF13419 Haloacid dehalogenase-like hydrolase ISU59_01560 PF03631 Virulence factor BrkB ISU59_01565 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU59_01570 PF01695 IstB-like ATP binding protein ISU59_01575 PF00665 Integrase core domain ISU59_01575 PF02796 Helix-turn-helix domain of resolvase ISU59_01580 PF12102 Domain of unknown function (DUF3578) ISU59_01580 PF07728 AAA domain (dynein-related subfamily) ISU59_01595 PF01555 DNA methylase ISU59_01635 PF05987 Bacterial protein of unknown function (DUF898) ISU59_01645 PF12833 Helix-turn-helix domain ISU59_01650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU59_01655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU59_01665 PF05524 PEP-utilising enzyme, N-terminal ISU59_01665 PF00381 PTS HPr component phosphorylation site ISU59_01665 PF02896 PEP-utilising enzyme, TIM barrel domain ISU59_01665 PF00391 PEP-utilising enzyme, mobile domain ISU59_01665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU59_01670 PF10696 Protein of unknown function (DUF2501) ISU59_01675 PF03992 Antibiotic biosynthesis monooxygenase ISU59_01680 PF01791 DeoC/LacD family aldolase ISU59_01685 PF13407 Periplasmic binding protein domain ISU59_01690 PF02653 Branched-chain amino acid transport system / permease component ISU59_01695 PF02653 Branched-chain amino acid transport system / permease component ISU59_01700 PF00005 ABC transporter ISU59_01715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_01715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_01720 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU59_01735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_01740 PF00873 AcrB/AcrD/AcrF family ISU59_01755 PF01095 Pectinesterase ISU59_01765 PF07256 Protein of unknown function (DUF1435) ISU59_01775 PF08468 Methyltransferase small domain N-terminal ISU59_01775 PF05175 Methyltransferase small domain ISU59_01780 PF03603 DNA polymerase III psi subunit ISU59_01785 PF00583 Acetyltransferase (GNAT) family ISU59_01790 PF00009 Elongation factor Tu GTP binding domain ISU59_01790 PF16658 Class II release factor RF3, C-terminal domain ISU59_01790 PF03144 Elongation factor Tu domain 2 ISU59_01795 PF04972 BON domain ISU59_01800 PF07043 Protein of unknown function (DUF1328) ISU59_01805 PF01734 Patatin-like phospholipase ISU59_01810 PF01026 TatD related DNase ISU59_01820 PF01791 DeoC/LacD family aldolase ISU59_01830 PF01676 Metalloenzyme superfamily ISU59_01835 PF01048 Phosphorylase superfamily ISU59_01840 PF10144 Bacterial virulence factor haemolysin ISU59_01845 PF18429 Domain of unknown function (DUF5609) ISU59_01850 PF18073 Rubredoxin metal binding domain ISU59_01855 PF13521 AAA domain ISU59_01855 PF01381 Helix-turn-helix ISU59_01860 PF02661 Fic/DOC family ISU59_01870 PF00691 OmpA family ISU59_01875 PF17152 Periplasmic sensor domain ISU59_01875 PF00990 Diguanylate cyclase, GGDEF domain ISU59_01885 PF00689 Cation transporting ATPase, C-terminus ISU59_01885 PF00690 Cation transporter/ATPase, N-terminus ISU59_01890 PF01464 Transglycosylase SLT domain ISU59_01890 PF14718 Soluble lytic murein transglycosylase L domain ISU59_01895 PF01371 Trp repressor protein ISU59_01900 PF01931 Protein of unknown function DUF84 ISU59_01905 PF00300 Histidine phosphatase superfamily (branch 1) ISU59_01910 PF12833 Helix-turn-helix domain ISU59_01910 PF06445 GyrI-like small molecule binding domain ISU59_01915 PF05981 CreA protein ISU59_01920 PF00072 Response regulator receiver domain ISU59_01920 PF00486 Transcriptional regulatory protein, C terminal ISU59_01925 PF08254 Threonine leader peptide ISU59_01930 PF00742 Homoserine dehydrogenase ISU59_01930 PF03447 Homoserine dehydrogenase, NAD binding domain ISU59_01930 PF13840 ACT domain ISU59_01930 PF01842 ACT domain ISU59_01930 PF00696 Amino acid kinase family ISU59_01935 PF00288 GHMP kinases N terminal domain ISU59_01935 PF08544 GHMP kinases C terminal ISU59_01940 PF14821 Threonine synthase N terminus ISU59_01940 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_01945 PF03883 Peroxide stress protein YaaA ISU59_01955 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU59_01960 PF00994 Probable molybdopterin binding domain ISU59_01965 PF07690 Major Facilitator Superfamily ISU59_01975 PF01184 GPR1/FUN34/yaaH family ISU59_01980 PF00012 Hsp70 protein ISU59_01985 PF00226 DnaJ domain ISU59_01985 PF01556 DnaJ C terminal domain ISU59_01985 PF00684 DnaJ central domain ISU59_01995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_01995 PF03466 LysR substrate binding domain ISU59_02000 PF01649 Ribosomal protein S20 ISU59_02005 PF06574 FAD synthetase ISU59_02005 PF01687 Riboflavin kinase ISU59_02010 PF00133 tRNA synthetases class I (I, L, M and V) ISU59_02010 PF08264 Anticodon-binding domain of tRNA ISU59_02010 PF06827 Zinc finger found in FPG and IleRS ISU59_02015 PF01252 Signal peptidase (SPase) II ISU59_02020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU59_02025 PF02401 LytB protein ISU59_02030 PF01797 Transposase IS200 like ISU59_02035 PF01113 Dihydrodipicolinate reductase, N-terminus ISU59_02035 PF05173 Dihydrodipicolinate reductase, C-terminus ISU59_02040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU59_02040 PF00117 Glutamine amidotransferase class-I ISU59_02045 PF02142 MGS-like domain ISU59_02045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU59_02045 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU59_02050 PF01810 LysE type translocator ISU59_02055 PF06738 Putative threonine/serine exporter ISU59_02060 PF12821 Threonine/Serine exporter, ThrE ISU59_02065 PF00186 Dihydrofolate reductase ISU59_02070 PF01797 Transposase IS200 like ISU59_02085 PF00149 Calcineurin-like phosphoesterase ISU59_02090 PF04379 ApaG domain ISU59_02095 PF00398 Ribosomal RNA adenine dimethylase ISU59_02100 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU59_02105 PF00639 PPIC-type PPIASE domain ISU59_02105 PF09312 SurA N-terminal domain ISU59_02110 PF04453 LPS transport system D ISU59_02110 PF03968 OstA-like protein ISU59_02115 PF05099 Tellurite resistance protein TerB ISU59_02115 PF00226 DnaJ domain ISU59_02120 PF00849 RNA pseudouridylate synthase ISU59_02135 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU59_02145 PF01695 IstB-like ATP binding protein ISU59_02150 PF02796 Helix-turn-helix domain of resolvase ISU59_02150 PF00665 Integrase core domain ISU59_02170 PF05947 Type VI secretion system, TssF ISU59_02180 PF07724 AAA domain (Cdc48 subfamily) ISU59_02180 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_02180 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_02180 PF17871 AAA lid domain ISU59_02185 PF06715 Gp5 C-terminal repeat (3 copies) ISU59_02185 PF04717 Type VI secretion system, phage-baseplate injector ISU59_02215 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU59_02220 PF05736 OprF membrane domain ISU59_02220 PF00691 OmpA family ISU59_02235 PF12137 RNA polymerase recycling family C-terminal ISU59_02235 PF18337 RapA N-terminal Tudor like domain ISU59_02235 PF00271 Helicase conserved C-terminal domain ISU59_02235 PF00176 SNF2 family N-terminal domain ISU59_02235 PF18339 RapA N-terminal Tudor like domain 1 ISU59_02240 PF00136 DNA polymerase family B ISU59_02240 PF03104 DNA polymerase family B, exonuclease domain ISU59_02245 PF09335 SNARE associated Golgi protein ISU59_02250 PF00005 ABC transporter ISU59_02255 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_02265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_02265 PF12793 Sugar transport-related sRNA regulator N-term ISU59_02270 PF07690 Major Facilitator Superfamily ISU59_02275 PF00694 Aconitase C-terminal domain ISU59_02280 PF00330 Aconitase family (aconitate hydratase) ISU59_02285 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU59_02290 PF00682 HMGL-like ISU59_02290 PF08502 LeuA allosteric (dimerisation) domain ISU59_02295 PF01797 Transposase IS200 like ISU59_02305 PF03466 LysR substrate binding domain ISU59_02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_02310 PF00501 AMP-binding enzyme ISU59_02315 PF00205 Thiamine pyrophosphate enzyme, central domain ISU59_02315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU59_02315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU59_02320 PF10369 Small subunit of acetolactate synthase ISU59_02325 PF01797 Transposase IS200 like ISU59_02330 PF00356 Bacterial regulatory proteins, lacI family ISU59_02330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU59_02335 PF06610 L-alanine exporter ISU59_02345 PF02381 MraZ protein, putative antitoxin-like ISU59_02350 PF01795 MraW methylase family ISU59_02355 PF04999 Cell division protein FtsL ISU59_02360 PF00905 Penicillin binding protein transpeptidase domain ISU59_02360 PF03717 Penicillin-binding Protein dimerisation domain ISU59_02365 PF08245 Mur ligase middle domain ISU59_02365 PF02875 Mur ligase family, glutamate ligase domain ISU59_02365 PF01225 Mur ligase family, catalytic domain ISU59_02370 PF08245 Mur ligase middle domain ISU59_02370 PF02875 Mur ligase family, glutamate ligase domain ISU59_02370 PF01225 Mur ligase family, catalytic domain ISU59_02375 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU59_02375 PF00953 Glycosyl transferase family 4 ISU59_02380 PF08245 Mur ligase middle domain ISU59_02380 PF02875 Mur ligase family, glutamate ligase domain ISU59_02385 PF01098 Cell cycle protein ISU59_02390 PF04101 Glycosyltransferase family 28 C-terminal domain ISU59_02390 PF03033 Glycosyltransferase family 28 N-terminal domain ISU59_02395 PF02875 Mur ligase family, glutamate ligase domain ISU59_02395 PF01225 Mur ligase family, catalytic domain ISU59_02395 PF08245 Mur ligase middle domain ISU59_02400 PF01820 D-ala D-ala ligase N-terminus ISU59_02400 PF07478 D-ala D-ala ligase C-terminus ISU59_02405 PF03799 Cell division protein FtsQ ISU59_02405 PF08478 POTRA domain, FtsQ-type ISU59_02410 PF02491 SHS2 domain inserted in FTSA ISU59_02415 PF12327 FtsZ family, C-terminal domain ISU59_02415 PF00091 Tubulin/FtsZ family, GTPase domain ISU59_02420 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU59_02430 PF06558 Secretion monitor precursor protein (SecM) ISU59_02435 PF02810 SEC-C motif ISU59_02435 PF01043 SecA preprotein cross-linking domain ISU59_02435 PF07517 SecA DEAD-like domain ISU59_02435 PF07516 SecA Wing and Scaffold domain ISU59_02445 PF00293 NUDIX domain ISU59_02450 PF01695 IstB-like ATP binding protein ISU59_02455 PF02796 Helix-turn-helix domain of resolvase ISU59_02455 PF00665 Integrase core domain ISU59_02465 PF07681 DoxX ISU59_02475 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU59_02480 PF05957 Bacterial protein of unknown function (DUF883) ISU59_02490 PF13721 SecD export protein N-terminal TM region ISU59_02495 PF09335 SNARE associated Golgi protein ISU59_02505 PF00392 Bacterial regulatory proteins, gntR family ISU59_02505 PF07729 FCD domain ISU59_02510 PF07690 Major Facilitator Superfamily ISU59_02515 PF02614 Glucuronate isomerase ISU59_02520 PF08125 Mannitol dehydrogenase C-terminal domain ISU59_02520 PF01232 Mannitol dehydrogenase Rossmann domain ISU59_02525 PF08666 SAF domain ISU59_02525 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU59_02530 PF10688 Bacterial inner membrane protein ISU59_02535 PF01797 Transposase IS200 like ISU59_02540 PF00375 Sodium:dicarboxylate symporter family ISU59_02545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU59_02550 PF01863 Protein of unknown function DUF45 ISU59_02555 PF03797 Autotransporter beta-domain ISU59_02560 PF05175 Methyltransferase small domain ISU59_02565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU59_02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_02570 PF03729 Short repeat of unknown function (DUF308) ISU59_02595 PF02342 TerD domain ISU59_02600 PF00092 von Willebrand factor type A domain ISU59_02605 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU59_02605 PF17287 POTRA domain ISU59_02605 PF08479 POTRA domain, ShlB-type ISU59_02610 PF05860 haemagglutination activity domain ISU59_02610 PF04829 Pre-toxin domain with VENN motif ISU59_02610 PF13018 Extended Signal Peptide of Type V secretion system ISU59_02610 PF13332 Hemagglutinin repeat ISU59_02620 PF13332 Hemagglutinin repeat ISU59_02620 PF04829 Pre-toxin domain with VENN motif ISU59_02625 PF04829 Pre-toxin domain with VENN motif ISU59_02625 PF13332 Hemagglutinin repeat ISU59_02640 PF05860 haemagglutination activity domain ISU59_02640 PF13018 Extended Signal Peptide of Type V secretion system ISU59_02640 PF13332 Hemagglutinin repeat ISU59_02640 PF04829 Pre-toxin domain with VENN motif ISU59_02645 PF05860 haemagglutination activity domain ISU59_02645 PF04829 Pre-toxin domain with VENN motif ISU59_02645 PF13018 Extended Signal Peptide of Type V secretion system ISU59_02645 PF13332 Hemagglutinin repeat ISU59_02665 PF03459 TOBE domain ISU59_02665 PF17912 MalK OB fold domain ISU59_02665 PF00005 ABC transporter ISU59_02670 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU59_02675 PF00356 Bacterial regulatory proteins, lacI family ISU59_02680 PF01547 Bacterial extracellular solute-binding protein ISU59_02685 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_02690 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_02700 PF14310 Fibronectin type III-like domain ISU59_02700 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU59_02700 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU59_02710 PF04632 Fusaric acid resistance protein family ISU59_02715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_02715 PF00529 HlyD membrane-fusion protein of T1SS ISU59_02730 PF00155 Aminotransferase class I and II ISU59_02750 PF01042 Endoribonuclease L-PSP ISU59_02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_02770 PF03466 LysR substrate binding domain ISU59_02815 PF04546 Sigma-70, non-essential region ISU59_02815 PF03979 Sigma-70 factor, region 1.1 ISU59_02815 PF00140 Sigma-70 factor, region 1.2 ISU59_02815 PF04539 Sigma-70 region 3 ISU59_02815 PF04542 Sigma-70 region 2 ISU59_02815 PF04545 Sigma-70, region 4 ISU59_02820 PF08278 DNA primase DnaG DnaB-binding ISU59_02820 PF10410 DnaB-helicase binding domain of primase ISU59_02820 PF01807 CHC2 zinc finger ISU59_02820 PF08275 DNA primase catalytic core, N-terminal domain ISU59_02825 PF01165 Ribosomal protein S21 ISU59_02830 PF00814 Glycoprotease family ISU59_02835 PF02660 Glycerol-3-phosphate acyltransferase ISU59_02840 PF02152 Dihydroneopterin aldolase ISU59_02845 PF02673 Bacitracin resistance protein BacA ISU59_02850 PF01966 HD domain ISU59_02850 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU59_02850 PF01743 Poly A polymerase head domain ISU59_02855 PF08239 Bacterial SH3 domain ISU59_02860 PF01928 CYTH domain ISU59_02865 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU59_02865 PF08335 GlnD PII-uridylyltransferase ISU59_02870 PF01467 Cytidylyltransferase-like ISU59_02870 PF00294 pfkB family carbohydrate kinase ISU59_02875 PF13520 Amino acid permease ISU59_02885 PF04380 Membrane fusogenic activity ISU59_02890 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU59_02895 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU59_02900 PF03738 Glutathionylspermidine synthase preATP-grasp ISU59_02905 PF06693 Protein of unknown function (DUF1190) ISU59_02910 PF02321 Outer membrane efflux protein ISU59_02915 PF00293 NUDIX domain ISU59_02920 PF06853 Protein of unknown function (DUF1249) ISU59_02930 PF05728 Uncharacterised protein family (UPF0227) ISU59_02935 PF00986 DNA gyrase B subunit, carboxyl terminus ISU59_02935 PF00204 DNA gyrase B ISU59_02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_02935 PF01751 Toprim domain ISU59_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_02940 PF03466 LysR substrate binding domain ISU59_02945 PF02525 Flavodoxin-like fold ISU59_02955 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU59_02955 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU59_02960 PF01553 Acyltransferase ISU59_02965 PF07732 Multicopper oxidase ISU59_02965 PF07731 Multicopper oxidase ISU59_02975 PF00248 Aldo/keto reductase family ISU59_02985 PF00465 Iron-containing alcohol dehydrogenase ISU59_02990 PF06719 AraC-type transcriptional regulator N-terminus ISU59_02990 PF12833 Helix-turn-helix domain ISU59_02995 PF09335 SNARE associated Golgi protein ISU59_03000 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU59_03005 PF01618 MotA/TolQ/ExbB proton channel family ISU59_03010 PF02472 Biopolymer transport protein ExbD/TolR ISU59_03045 PF00437 Type II/IV secretion system protein ISU59_03060 PF04972 BON domain ISU59_03060 PF00263 Bacterial type II and III secretion system protein ISU59_03060 PF13629 Pilus formation protein N terminal region ISU59_03065 PF13629 Pilus formation protein N terminal region ISU59_03065 PF00263 Bacterial type II and III secretion system protein ISU59_03065 PF04972 BON domain ISU59_03080 PF01797 Transposase IS200 like ISU59_03085 PF13953 PapC C-terminal domain ISU59_03085 PF13954 PapC N-terminal domain ISU59_03085 PF00577 Outer membrane usher protein ISU59_03090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_03090 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_03095 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU59_03095 PF00419 Fimbrial protein ISU59_03100 PF01497 Periplasmic binding protein ISU59_03115 PF00771 FHIPEP family ISU59_03120 PF01312 FlhB HrpN YscU SpaS Family ISU59_03125 PF01311 Bacterial export proteins, family 1 ISU59_03130 PF01313 Bacterial export proteins, family 3 ISU59_03135 PF00813 FliP family ISU59_03140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU59_03150 PF00158 Sigma-54 interaction domain ISU59_03150 PF02954 Bacterial regulatory protein, Fis family ISU59_03150 PF00072 Response regulator receiver domain ISU59_03155 PF02049 Flagellar hook-basal body complex protein FliE ISU59_03160 PF08345 Flagellar M-ring protein C-terminal ISU59_03160 PF01514 Secretory protein of YscJ/FliF family ISU59_03175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU59_03175 PF18269 T3SS EscN ATPase C-terminal domain ISU59_03195 PF13144 Chaperone for flagella basal body P-ring formation ISU59_03200 PF00460 Flagella basal body rod protein ISU59_03205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_03205 PF00460 Flagella basal body rod protein ISU59_03210 PF13860 FlgD Ig-like domain ISU59_03210 PF13861 FlgD Tudor-like domain ISU59_03210 PF03963 Flagellar hook capping protein - N-terminal region ISU59_03215 PF00460 Flagella basal body rod protein ISU59_03215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_03215 PF07559 Flagellar basal body protein FlaE ISU59_03220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_03220 PF00460 Flagella basal body rod protein ISU59_03225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_03225 PF00460 Flagella basal body rod protein ISU59_03230 PF02107 Flagellar L-ring protein ISU59_03235 PF02119 Flagellar P-ring protein ISU59_03245 PF00460 Flagella basal body rod protein ISU59_03245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_03265 PF18500 CadC C-terminal domain 1 ISU59_03265 PF00486 Transcriptional regulatory protein, C terminal ISU59_03270 PF00700 Bacterial flagellin C-terminal helical region ISU59_03270 PF00669 Bacterial flagellin N-terminal helical region ISU59_03285 PF00356 Bacterial regulatory proteins, lacI family ISU59_03290 PF00939 Sodium:sulfate symporter transmembrane region ISU59_03305 PF03527 RHS protein ISU59_03305 PF05593 RHS Repeat ISU59_03315 PF04717 Type VI secretion system, phage-baseplate injector ISU59_03320 PF12951 Passenger-associated-transport-repeat ISU59_03330 PF02447 GntP family permease ISU59_03345 PF00005 ABC transporter ISU59_03345 PF00664 ABC transporter transmembrane region ISU59_03350 PF00664 ABC transporter transmembrane region ISU59_03350 PF00005 ABC transporter ISU59_03350 PF08021 Siderophore-interacting FAD-binding domain ISU59_03350 PF04954 Siderophore-interacting protein ISU59_03360 PF00975 Thioesterase domain ISU59_03375 PF00668 Condensation domain ISU59_03375 PF00501 AMP-binding enzyme ISU59_03375 PF00550 Phosphopantetheine attachment site ISU59_03375 PF08242 Methyltransferase domain ISU59_03385 PF00668 Condensation domain ISU59_03385 PF08242 Methyltransferase domain ISU59_03385 PF00501 AMP-binding enzyme ISU59_03385 PF00550 Phosphopantetheine attachment site ISU59_03390 PF00501 AMP-binding enzyme ISU59_03390 PF08242 Methyltransferase domain ISU59_03390 PF00668 Condensation domain ISU59_03390 PF00550 Phosphopantetheine attachment site ISU59_03395 PF01695 IstB-like ATP binding protein ISU59_03400 PF02796 Helix-turn-helix domain of resolvase ISU59_03400 PF00665 Integrase core domain ISU59_03405 PF00589 Phage integrase family ISU59_03405 PF13356 Arm DNA-binding domain ISU59_03405 PF14659 Phage integrase, N-terminal SAM-like domain ISU59_03415 PF01336 OB-fold nucleic acid binding domain ISU59_03415 PF00152 tRNA synthetases class II (D, K and N) ISU59_03425 PF02272 DHHA1 domain ISU59_03425 PF01368 DHH family ISU59_03425 PF17768 RecJ OB domain ISU59_03430 PF13098 Thioredoxin-like domain ISU59_03430 PF10411 Disulfide bond isomerase protein N-terminus ISU59_03435 PF00589 Phage integrase family ISU59_03435 PF02899 Phage integrase, N-terminal SAM-like domain ISU59_03440 PF00258 Flavodoxin ISU59_03445 PF06123 Inner membrane protein CreD ISU59_03450 PF00512 His Kinase A (phospho-acceptor) domain ISU59_03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_03450 PF00672 HAMP domain ISU59_03455 PF00072 Response regulator receiver domain ISU59_03455 PF00486 Transcriptional regulatory protein, C terminal ISU59_03460 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU59_03465 PF03937 Flavinator of succinate dehydrogenase ISU59_03470 PF01571 Aminomethyltransferase folate-binding domain ISU59_03480 PF03006 Haemolysin-III related ISU59_03510 PF02347 Glycine cleavage system P-protein ISU59_03515 PF01597 Glycine cleavage H-protein ISU59_03520 PF01571 Aminomethyltransferase folate-binding domain ISU59_03520 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU59_03525 PF01494 FAD binding domain ISU59_03530 PF01494 FAD binding domain ISU59_03535 PF05195 Aminopeptidase P, N-terminal domain ISU59_03535 PF00557 Metallopeptidase family M24 ISU59_03540 PF03695 Uncharacterised protein family (UPF0149) ISU59_03545 PF05164 Cell division protein ZapA ISU59_03555 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU59_03565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU59_03565 PF01842 ACT domain ISU59_03565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU59_03570 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU59_03575 PF03466 LysR substrate binding domain ISU59_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_03580 PF04402 Protein of unknown function (DUF541) ISU59_03585 PF01810 LysE type translocator ISU59_03590 PF05552 Conserved TM helix ISU59_03590 PF00924 Mechanosensitive ion channel ISU59_03600 PF01116 Fructose-bisphosphate aldolase class-II ISU59_03605 PF00162 Phosphoglycerate kinase ISU59_03610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU59_03610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU59_03615 PF01797 Transposase IS200 like ISU59_03620 PF00456 Transketolase, thiamine diphosphate binding domain ISU59_03620 PF02780 Transketolase, C-terminal domain ISU59_03620 PF02779 Transketolase, pyrimidine binding domain ISU59_03625 PF01435 Peptidase family M48 ISU59_03640 PF17810 Arginine decarboxylase helical bundle domain ISU59_03640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU59_03640 PF17944 Arginine decarboxylase C-terminal helical extension ISU59_03645 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU59_03645 PF02772 S-adenosylmethionine synthetase, central domain ISU59_03645 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU59_03650 PF10263 SprT-like family ISU59_03650 PF17283 SprT-like zinc ribbon domain ISU59_03655 PF04231 Endonuclease I ISU59_03660 PF04452 RNA methyltransferase ISU59_03665 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU59_03665 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU59_03670 PF02622 Uncharacterized ACR, COG1678 ISU59_03675 PF03652 Holliday junction resolvase ISU59_03680 PF00795 Carbon-nitrogen hydrolase ISU59_03685 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU59_03690 PF00437 Type II/IV secretion system protein ISU59_03695 PF01168 Alanine racemase, N-terminal domain ISU59_03700 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU59_03700 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU59_03705 PF02325 YGGT family ISU59_03710 PF02594 Uncharacterised ACR, YggU family COG1872 ISU59_03715 PF01725 Ham1 family ISU59_03720 PF04055 Radical SAM superfamily ISU59_03720 PF06969 HemN C-terminal domain ISU59_03735 PF11101 Protein of unknown function (DUF2884) ISU59_03740 PF11101 Protein of unknown function (DUF2884) ISU59_03745 PF04960 Glutaminase ISU59_03750 PF04320 Protein with unknown function (DUF469) ISU59_03755 PF02390 Putative methyltransferase ISU59_03760 PF00633 Helix-hairpin-helix motif ISU59_03760 PF14815 NUDIX domain ISU59_03760 PF10576 Iron-sulfur binding domain of endonuclease III ISU59_03760 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU59_03765 PF04362 Bacterial Fe(2+) trafficking ISU59_03770 PF01464 Transglycosylase SLT domain ISU59_03770 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU59_03780 PF07715 TonB-dependent Receptor Plug Domain ISU59_03785 PF02653 Branched-chain amino acid transport system / permease component ISU59_03790 PF00005 ABC transporter ISU59_03795 PF13407 Periplasmic binding protein domain ISU59_03800 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU59_03800 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU59_03800 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU59_03860 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU59_03860 PF04717 Type VI secretion system, phage-baseplate injector ISU59_03860 PF13296 Putative type VI secretion system Rhs element Vgr ISU59_03875 PF05736 OprF membrane domain ISU59_03875 PF00691 OmpA family ISU59_03890 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU59_03910 PF02517 CPBP intramembrane metalloprotease ISU59_03915 PF00765 Autoinducer synthase ISU59_03920 PF00196 Bacterial regulatory proteins, luxR family ISU59_03920 PF03472 Autoinducer binding domain ISU59_03955 PF04183 IucA / IucC family ISU59_03955 PF06276 Ferric iron reductase FhuF-like transporter ISU59_03960 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU59_03965 PF07715 TonB-dependent Receptor Plug Domain ISU59_03965 PF00593 TonB dependent receptor ISU59_03980 PF08448 PAS fold ISU59_03980 PF00563 EAL domain ISU59_03980 PF00990 Diguanylate cyclase, GGDEF domain ISU59_03980 PF08447 PAS fold ISU59_03990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_03990 PF00529 HlyD membrane-fusion protein of T1SS ISU59_03995 PF00873 AcrB/AcrD/AcrF family ISU59_04010 PF03797 Autotransporter beta-domain ISU59_04015 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU59_04015 PF12468 Type III secretion system leucine rich repeat protein ISU59_04025 PF12468 Type III secretion system leucine rich repeat protein ISU59_04025 PF12468 Type III secretion system leucine rich repeat protein ISU59_04025 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU59_04025 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU59_04030 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU59_04030 PF12468 Type III secretion system leucine rich repeat protein ISU59_04035 PF03806 AbgT putative transporter family ISU59_04040 PF07687 Peptidase dimerisation domain ISU59_04040 PF01546 Peptidase family M20/M25/M40 ISU59_04045 PF07715 TonB-dependent Receptor Plug Domain ISU59_04045 PF00593 TonB dependent receptor ISU59_04055 PF02796 Helix-turn-helix domain of resolvase ISU59_04055 PF00665 Integrase core domain ISU59_04060 PF01695 IstB-like ATP binding protein ISU59_04080 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU59_04085 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU59_04175 PF03551 Transcriptional regulator PadR-like family ISU59_04180 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU59_04190 PF13407 Periplasmic binding protein domain ISU59_04195 PF02653 Branched-chain amino acid transport system / permease component ISU59_04200 PF00005 ABC transporter ISU59_04205 PF17912 MalK OB fold domain ISU59_04205 PF00005 ABC transporter ISU59_04210 PF13416 Bacterial extracellular solute-binding protein ISU59_04215 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_04220 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_04225 PF07745 Glycosyl hydrolase family 53 ISU59_04230 PF08532 Beta-galactosidase trimerisation domain ISU59_04230 PF02449 Beta-galactosidase ISU59_04230 PF08533 Beta-galactosidase C-terminal domain ISU59_04235 PF00367 phosphotransferase system, EIIB ISU59_04235 PF02378 Phosphotransferase system, EIIC ISU59_04240 PF02264 LamB porin ISU59_04245 PF00356 Bacterial regulatory proteins, lacI family ISU59_04250 PF16338 Domain of unknown function (DUF4968) ISU59_04250 PF17137 Domain of unknown function (DUF5110) ISU59_04250 PF13802 Galactose mutarotase-like ISU59_04250 PF01055 Glycosyl hydrolases family 31 ISU59_04255 PF07690 Major Facilitator Superfamily ISU59_04260 PF00356 Bacterial regulatory proteins, lacI family ISU59_04270 PF01116 Fructose-bisphosphate aldolase class-II ISU59_04280 PF00884 Sulfatase ISU59_04285 PF13186 Iron-sulfur cluster-binding domain ISU59_04285 PF04055 Radical SAM superfamily ISU59_04290 PF07470 Glycosyl Hydrolase Family 88 ISU59_04300 PF01979 Amidohydrolase family ISU59_04305 PF03610 PTS system fructose IIA component ISU59_04310 PF03613 PTS system mannose/fructose/sorbose family IID component ISU59_04315 PF03609 PTS system sorbose-specific iic component ISU59_04320 PF03830 PTS system sorbose subfamily IIB component ISU59_04325 PF01380 SIS domain ISU59_04330 PF08013 Tagatose 6 phosphate kinase ISU59_04335 PF08220 DeoR-like helix-turn-helix domain ISU59_04335 PF00455 DeoR C terminal sensor domain ISU59_04340 PF00884 Sulfatase ISU59_04345 PF01797 Transposase IS200 like ISU59_04350 PF02796 Helix-turn-helix domain of resolvase ISU59_04350 PF00665 Integrase core domain ISU59_04355 PF01695 IstB-like ATP binding protein ISU59_04360 PF09093 Lyase, catalytic ISU59_04360 PF09092 Lyase, N terminal ISU59_04360 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU59_04360 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU59_04380 PF00484 Carbonic anhydrase ISU59_04395 PF00263 Bacterial type II and III secretion system protein ISU59_04395 PF03958 Bacterial type II/III secretion system short domain ISU59_04400 PF00437 Type II/IV secretion system protein ISU59_04410 PF07963 Prokaryotic N-terminal methylation motif ISU59_04410 PF08334 Type II secretion system (T2SS), protein G ISU59_04420 PF02501 Type II secretion system (T2SS), protein I ISU59_04420 PF07963 Prokaryotic N-terminal methylation motif ISU59_04425 PF11612 Type II secretion system (T2SS), protein J ISU59_04425 PF07963 Prokaryotic N-terminal methylation motif ISU59_04445 PF06750 Bacterial Peptidase A24 N-terminal domain ISU59_04445 PF01478 Type IV leader peptidase family ISU59_04465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU59_04465 PF00672 HAMP domain ISU59_04465 PF02203 Tar ligand binding domain homologue ISU59_04480 PF03466 LysR substrate binding domain ISU59_04480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_04485 PF07690 Major Facilitator Superfamily ISU59_04490 PF03466 LysR substrate binding domain ISU59_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_04495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU59_04495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU59_04500 PF00356 Bacterial regulatory proteins, lacI family ISU59_04505 PF00384 Molybdopterin oxidoreductase ISU59_04505 PF01568 Molydopterin dinucleotide binding domain ISU59_04510 PF00501 AMP-binding enzyme ISU59_04510 PF01553 Acyltransferase ISU59_04510 PF13193 AMP-binding enzyme C-terminal domain ISU59_04515 PF07690 Major Facilitator Superfamily ISU59_04530 PF00248 Aldo/keto reductase family ISU59_04535 PF02976 DNA mismatch repair enzyme MutH ISU59_04540 PF00293 NUDIX domain ISU59_04545 PF00391 PEP-utilising enzyme, mobile domain ISU59_04545 PF01590 GAF domain ISU59_04545 PF02896 PEP-utilising enzyme, TIM barrel domain ISU59_04545 PF05524 PEP-utilising enzyme, N-terminal ISU59_04550 PF01790 Prolipoprotein diacylglyceryl transferase ISU59_04555 PF00303 Thymidylate synthase ISU59_04580 PF17946 RecC C-terminal domain ISU59_04585 PF05193 Peptidase M16 inactive domain ISU59_04585 PF16187 Middle or third domain of peptidase_M16 ISU59_04585 PF00675 Insulinase (Peptidase family M16) ISU59_04590 PF12705 PD-(D/E)XK nuclease superfamily ISU59_04590 PF00580 UvrD/REP helicase N-terminal domain ISU59_04590 PF13361 UvrD-like helicase C-terminal domain ISU59_04595 PF13538 UvrD-like helicase C-terminal domain ISU59_04600 PF00696 Amino acid kinase family ISU59_04600 PF00583 Acetyltransferase (GNAT) family ISU59_04605 PF11741 AMIN domain ISU59_04605 PF01520 N-acetylmuramoyl-L-alanine amidase ISU59_04620 PF06725 3D domain ISU59_04620 PF03562 MltA specific insert domain ISU59_04625 PF00899 ThiF family ISU59_04630 PF02657 Fe-S metabolism associated domain ISU59_04635 PF00266 Aminotransferase class-V ISU59_04645 PF03466 LysR substrate binding domain ISU59_04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_04650 PF04241 Protein of unknown function (DUF423) ISU59_04655 PF18125 RlmM ferredoxin-like domain ISU59_04655 PF01728 FtsJ-like methyltransferase ISU59_04660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU59_04660 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU59_04665 PF01695 IstB-like ATP binding protein ISU59_04670 PF02796 Helix-turn-helix domain of resolvase ISU59_04670 PF00665 Integrase core domain ISU59_04675 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU59_04675 PF11892 Domain of unknown function (DUF3412) ISU59_04675 PF03641 Possible lysine decarboxylase ISU59_04680 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU59_04680 PF14489 QueF-like protein ISU59_04685 PF07348 Syd protein (SUKH-2) ISU59_04690 PF01797 Transposase IS200 like ISU59_04695 PF04287 tRNA pseudouridine synthase C ISU59_04700 PF00849 RNA pseudouridylate synthase ISU59_04705 PF00258 Flavodoxin ISU59_04710 PF11944 Protein of unknown function (DUF3461) ISU59_04715 PF00132 Bacterial transferase hexapeptide (six repeats) ISU59_04715 PF14602 Hexapeptide repeat of succinyl-transferase ISU59_04715 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU59_04720 PF01909 Nucleotidyltransferase domain ISU59_04720 PF01966 HD domain ISU59_04720 PF08335 GlnD PII-uridylyltransferase ISU59_04720 PF01842 ACT domain ISU59_04725 PF00557 Metallopeptidase family M24 ISU59_04730 PF00318 Ribosomal protein S2 ISU59_04735 PF00889 Elongation factor TS ISU59_04740 PF00696 Amino acid kinase family ISU59_04745 PF01765 Ribosome recycling factor ISU59_04750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU59_04750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU59_04750 PF13288 DXP reductoisomerase C-terminal domain ISU59_04755 PF01255 Putative undecaprenyl diphosphate synthase ISU59_04765 PF17820 PDZ domain ISU59_04765 PF02163 Peptidase family M50 ISU59_04770 PF01103 Surface antigen ISU59_04770 PF07244 Surface antigen variable number repeat ISU59_04775 PF03938 Outer membrane protein (OmpH-like) ISU59_04780 PF00132 Bacterial transferase hexapeptide (six repeats) ISU59_04780 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU59_04785 PF07977 FabA-like domain ISU59_04790 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU59_04790 PF00132 Bacterial transferase hexapeptide (six repeats) ISU59_04795 PF02684 Lipid-A-disaccharide synthetase ISU59_04800 PF01351 Ribonuclease HII ISU59_04805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU59_04805 PF14579 Helix-hairpin-helix motif ISU59_04805 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU59_04805 PF02811 PHP domain ISU59_04805 PF01336 OB-fold nucleic acid binding domain ISU59_04810 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU59_04815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU59_04820 PF01171 PP-loop family ISU59_04820 PF09179 TilS substrate binding domain ISU59_04820 PF11734 TilS substrate C-terminal domain ISU59_04825 PF00034 Cytochrome c ISU59_04830 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU59_04835 PF06786 Uncharacterised protein family (UPF0253) ISU59_04840 PF07152 YaeQ protein ISU59_04845 PF00472 RF-1 domain ISU59_04850 PF17185 NlpE C-terminal OB domain ISU59_04850 PF04170 NlpE N-terminal domain ISU59_04855 PF03129 Anticodon binding domain ISU59_04855 PF04073 Aminoacyl-tRNA editing domain ISU59_04855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU59_04860 PF01980 tRNA-methyltransferase O ISU59_04860 PF18389 TrmO C-terminal domain ISU59_04865 PF16358 RcsF lipoprotein ISU59_04870 PF03180 NLPA lipoprotein ISU59_04875 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_04880 PF00005 ABC transporter ISU59_04880 PF09383 NIL domain ISU59_04915 PF00248 Aldo/keto reductase family ISU59_04925 PF03372 Endonuclease/Exonuclease/phosphatase family ISU59_04930 PF01476 LysM domain ISU59_04930 PF01464 Transglycosylase SLT domain ISU59_04935 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU59_04935 PF00753 Metallo-beta-lactamase superfamily ISU59_04940 PF08241 Methyltransferase domain ISU59_04945 PF00075 RNase H ISU59_04950 PF00929 Exonuclease ISU59_04960 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU59_04970 PF01695 IstB-like ATP binding protein ISU59_04975 PF02796 Helix-turn-helix domain of resolvase ISU59_04975 PF00665 Integrase core domain ISU59_04985 PF05973 Phage derived protein Gp49-like (DUF891) ISU59_05035 PF13356 Arm DNA-binding domain ISU59_05035 PF00589 Phage integrase family ISU59_05040 PF01797 Transposase IS200 like ISU59_05050 PF01668 SmpB protein ISU59_05055 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU59_05060 PF03658 RnfH family Ubiquitin ISU59_05065 PF04355 SmpA / OmlA family ISU59_05070 PF02463 RecF/RecN/SMC N terminal domain ISU59_05075 PF01513 ATP-NAD kinase ISU59_05080 PF01025 GrpE ISU59_05085 PF00285 Citrate synthase, C-terminal domain ISU59_05090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU59_05095 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU59_05100 PF00890 FAD binding domain ISU59_05100 PF02910 Fumarate reductase flavoprotein C-term ISU59_05105 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU59_05110 PF16078 2-oxoglutarate dehydrogenase N-terminus ISU59_05110 PF00676 Dehydrogenase E1 component ISU59_05110 PF16870 2-oxoglutarate dehydrogenase C-terminal ISU59_05110 PF02779 Transketolase, pyrimidine binding domain ISU59_05115 PF02817 e3 binding domain ISU59_05115 PF00364 Biotin-requiring enzyme ISU59_05115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU59_05120 PF00549 CoA-ligase ISU59_05120 PF08442 ATP-grasp domain ISU59_05125 PF02629 CoA binding domain ISU59_05125 PF00549 CoA-ligase ISU59_05130 PF01654 Cytochrome bd terminal oxidase subunit I ISU59_05135 PF02322 Cytochrome bd terminal oxidase subunit II ISU59_05140 PF08173 Membrane bound YbgT-like protein ISU59_05145 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU59_05150 PF03061 Thioesterase superfamily ISU59_05155 PF01618 MotA/TolQ/ExbB proton channel family ISU59_05160 PF02472 Biopolymer transport protein ExbD/TolR ISU59_05165 PF06519 TolA C-terminal ISU59_05165 PF06519 TolA C-terminal ISU59_05170 PF07676 WD40-like Beta Propeller Repeat ISU59_05170 PF04052 TolB amino-terminal domain ISU59_05175 PF00691 OmpA family ISU59_05180 PF13174 Tetratricopeptide repeat ISU59_05180 PF16331 TolA binding protein trimerisation ISU59_05200 PF02445 Quinolinate synthetase A protein ISU59_05205 PF04973 Nicotinamide mononucleotide transporter ISU59_05210 PF01545 Cation efflux family ISU59_05215 PF00793 DAHP synthetase I family ISU59_05220 PF00300 Histidine phosphatase superfamily (branch 1) ISU59_05230 PF01263 Aldose 1-epimerase ISU59_05240 PF00288 GHMP kinases N terminal domain ISU59_05240 PF08544 GHMP kinases C terminal ISU59_05240 PF10509 Galactokinase galactose-binding signature ISU59_05245 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU59_05245 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU59_05250 PF16363 GDP-mannose 4,6 dehydratase ISU59_05260 PF00005 ABC transporter ISU59_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_05265 PF03459 TOBE domain ISU59_05270 PF10766 Multidrug efflux pump-associated protein AcrZ ISU59_05280 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_05285 PF00005 ABC transporter ISU59_05285 PF03459 TOBE domain ISU59_05295 PF10282 Lactonase, 7-bladed beta-propeller ISU59_05300 PF00202 Aminotransferase class-III ISU59_05305 PF06968 Biotin and Thiamin Synthesis associated domain ISU59_05305 PF04055 Radical SAM superfamily ISU59_05310 PF00155 Aminotransferase class I and II ISU59_05315 PF08241 Methyltransferase domain ISU59_05325 PF09383 NIL domain ISU59_05325 PF00005 ABC transporter ISU59_05330 PF17757 UvrB interaction domain ISU59_05330 PF12344 Ultra-violet resistance protein B ISU59_05330 PF02151 UvrB/uvrC motif ISU59_05330 PF04851 Type III restriction enzyme, res subunit ISU59_05330 PF00271 Helicase conserved C-terminal domain ISU59_05335 PF09905 DNA-binding protein VF530 ISU59_05340 PF01933 Uncharacterised protein family UPF0052 ISU59_05345 PF04055 Radical SAM superfamily ISU59_05345 PF06463 Molybdenum Cofactor Synthesis C ISU59_05350 PF01967 MoaC family ISU59_05355 PF02597 ThiS family ISU59_05360 PF02391 MoaE protein ISU59_05365 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU59_05370 PF01797 Transposase IS200 like ISU59_05380 PF01207 Dihydrouridine synthase (Dus) ISU59_05390 PF00768 D-alanyl-D-alanine carboxypeptidase ISU59_05395 PF09330 D-lactate dehydrogenase, membrane binding ISU59_05395 PF01565 FAD binding domain ISU59_05400 PF01928 CYTH domain ISU59_05405 PF01844 HNH endonuclease ISU59_05415 PF04226 Transglycosylase associated protein ISU59_05420 PF00005 ABC transporter ISU59_05430 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_05435 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_05440 PF07308 Protein of unknown function (DUF1456) ISU59_05445 PF02954 Bacterial regulatory protein, Fis family ISU59_05445 PF00158 Sigma-54 interaction domain ISU59_05445 PF13188 PAS domain ISU59_05450 PF02653 Branched-chain amino acid transport system / permease component ISU59_05455 PF02653 Branched-chain amino acid transport system / permease component ISU59_05460 PF00005 ABC transporter ISU59_05465 PF00005 ABC transporter ISU59_05480 PF00581 Rhodanese-like domain ISU59_05485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU59_05490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU59_05495 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_05500 PF00005 ABC transporter ISU59_05505 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_05510 PF13520 Amino acid permease ISU59_05515 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU59_05515 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU59_05515 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU59_05525 PF00892 EamA-like transporter family ISU59_05530 PF00267 Gram-negative porin ISU59_05535 PF13307 Helicase C-terminal domain ISU59_05535 PF06733 DEAD_2 ISU59_05540 PF00199 Catalase ISU59_05540 PF06628 Catalase-related immune-responsive ISU59_05545 PF07437 YfaZ precursor ISU59_05550 PF03222 Tryptophan/tyrosine permease family ISU59_05555 PF00994 Probable molybdopterin binding domain ISU59_05560 PF03974 Ecotin ISU59_05565 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU59_05570 PF00268 Ribonucleotide reductase, small chain ISU59_05575 PF00317 Ribonucleotide reductase, all-alpha domain ISU59_05575 PF02867 Ribonucleotide reductase, barrel domain ISU59_05575 PF03477 ATP cone domain ISU59_05585 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU59_05585 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU59_05590 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU59_05590 PF00072 Response regulator receiver domain ISU59_05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_05590 PF00512 His Kinase A (phospho-acceptor) domain ISU59_05595 PF00196 Bacterial regulatory proteins, luxR family ISU59_05595 PF00072 Response regulator receiver domain ISU59_05600 PF16359 RcsD-ABL domain ISU59_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_05600 PF01627 Hpt domain ISU59_05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_05605 PF16359 RcsD-ABL domain ISU59_05605 PF01627 Hpt domain ISU59_05610 PF07690 Major Facilitator Superfamily ISU59_05615 PF00267 Gram-negative porin ISU59_05620 PF01797 Transposase IS200 like ISU59_05635 PF00144 Beta-lactamase ISU59_05645 PF12706 Beta-lactamase superfamily domain ISU59_05650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU59_05650 PF00672 HAMP domain ISU59_05650 PF02743 Cache domain ISU59_05655 PF01278 Omptin family ISU59_05660 PF06183 DinI-like family ISU59_05665 PF01381 Helix-turn-helix ISU59_05665 PF00717 Peptidase S24-like ISU59_05670 PF06530 Phage antitermination protein Q ISU59_05675 PF07005 Sugar-binding N-terminal domain ISU59_05675 PF17042 Nucleotide-binding C-terminal domain ISU59_05685 PF00455 DeoR C terminal sensor domain ISU59_05685 PF08220 DeoR-like helix-turn-helix domain ISU59_05690 PF01261 Xylose isomerase-like TIM barrel ISU59_05710 PF04984 Phage tail sheath protein subtilisin-like domain ISU59_05710 PF17482 Phage tail sheath C-terminal domain ISU59_05750 PF04865 Baseplate J-like protein ISU59_05765 PF07484 Phage Tail Collar Domain ISU59_05770 PF01418 Helix-turn-helix domain, rpiR family ISU59_05770 PF01380 SIS domain ISU59_05775 PF00232 Glycosyl hydrolase family 1 ISU59_05795 PF05638 Type VI secretion system effector, Hcp ISU59_05810 PF11893 Domain of unknown function (DUF3413) ISU59_05810 PF00884 Sulfatase ISU59_05815 PF07208 Protein of unknown function (DUF1414) ISU59_05820 PF04245 37-kD nucleoid-associated bacterial protein ISU59_05825 PF01797 Transposase IS200 like ISU59_05830 PF01386 Ribosomal L25p family ISU59_05835 PF04851 Type III restriction enzyme, res subunit ISU59_05835 PF00271 Helicase conserved C-terminal domain ISU59_05840 PF01479 S4 domain ISU59_05840 PF00849 RNA pseudouridylate synthase ISU59_05845 PF07690 Major Facilitator Superfamily ISU59_05850 PF13989 YejG-like protein ISU59_05855 PF00005 ABC transporter ISU59_05855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_05860 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_05860 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU59_05865 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_05870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_05875 PF00563 EAL domain ISU59_05875 PF12792 CSS motif domain associated with EAL ISU59_05880 PF00877 NlpC/P60 family ISU59_05885 PF01569 PAP2 superfamily ISU59_05890 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU59_05890 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU59_05895 PF00392 Bacterial regulatory proteins, gntR family ISU59_05895 PF07729 FCD domain ISU59_05900 PF01232 Mannitol dehydrogenase Rossmann domain ISU59_05900 PF08125 Mannitol dehydrogenase C-terminal domain ISU59_05905 PF03786 D-mannonate dehydratase (UxuA) ISU59_05910 PF08207 Elongation factor P (EF-P) KOW-like domain ISU59_05910 PF01132 Elongation factor P (EF-P) OB domain ISU59_05910 PF09285 Elongation factor P, C-terminal ISU59_05915 PF03222 Tryptophan/tyrosine permease family ISU59_05920 PF03692 Putative zinc- or iron-chelating domain ISU59_05930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU59_05930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU59_05930 PF01842 ACT domain ISU59_05940 PF00171 Aldehyde dehydrogenase family ISU59_05945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_05945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_05950 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU59_05960 PF00005 ABC transporter ISU59_05965 PF02653 Branched-chain amino acid transport system / permease component ISU59_05970 PF00293 NUDIX domain ISU59_05975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU59_05975 PF00381 PTS HPr component phosphorylation site ISU59_05980 PF00294 pfkB family carbohydrate kinase ISU59_05985 PF02378 Phosphotransferase system, EIIC ISU59_05985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU59_05990 PF00486 Transcriptional regulatory protein, C terminal ISU59_05995 PF17550 Family of unknown function ISU59_06005 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_06005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_06010 PF00577 Outer membrane usher protein ISU59_06010 PF13954 PapC N-terminal domain ISU59_06010 PF13953 PapC C-terminal domain ISU59_06015 PF01261 Xylose isomerase-like TIM barrel ISU59_06020 PF03601 Conserved hypothetical protein 698 ISU59_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_06025 PF03466 LysR substrate binding domain ISU59_06030 PF00324 Amino acid permease ISU59_06040 PF01032 FecCD transport family ISU59_06045 PF00005 ABC transporter ISU59_06050 PF07715 TonB-dependent Receptor Plug Domain ISU59_06050 PF00593 TonB dependent receptor ISU59_06055 PF13417 Glutathione S-transferase, N-terminal domain ISU59_06055 PF00043 Glutathione S-transferase, C-terminal domain ISU59_06070 PF03180 NLPA lipoprotein ISU59_06075 PF09383 NIL domain ISU59_06075 PF00005 ABC transporter ISU59_06080 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_06085 PF00768 D-alanyl-D-alanine carboxypeptidase ISU59_06085 PF07943 Penicillin-binding protein 5, C-terminal domain ISU59_06095 PF00455 DeoR C terminal sensor domain ISU59_06095 PF08220 DeoR-like helix-turn-helix domain ISU59_06100 PF01791 DeoC/LacD family aldolase ISU59_06105 PF01569 PAP2 superfamily ISU59_06115 PF02080 TrkA-C domain ISU59_06115 PF06826 Predicted Permease Membrane Region ISU59_06120 PF00462 Glutaredoxin ISU59_06125 PF07214 Protein of unknown function (DUF1418) ISU59_06130 PF10722 Putative bacterial sensory transduction regulator ISU59_06135 PF13416 Bacterial extracellular solute-binding protein ISU59_06140 PF00005 ABC transporter ISU59_06140 PF08402 TOBE domain ISU59_06145 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_06150 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_06155 PF10767 Protein of unknown function (DUF2593) ISU59_06160 PF05958 tRNA (Uracil-5-)-methyltransferase ISU59_06165 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_06190 PF01032 FecCD transport family ISU59_06195 PF01032 FecCD transport family ISU59_06200 PF00005 ABC transporter ISU59_06205 PF03059 Nicotianamine synthase protein ISU59_06210 PF10100 Staphylopine dehydrogenase ISU59_06215 PF00892 EamA-like transporter family ISU59_06225 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_06230 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_06235 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_06240 PF00005 ABC transporter ISU59_06245 PF01817 Chorismate mutase type II ISU59_06250 PF12883 Protein of unknown function (DUF3828) ISU59_06255 PF01370 NAD dependent epimerase/dehydratase family ISU59_06260 PF13460 NAD(P)H-binding ISU59_06260 PF11066 Protein of unknown function (DUF2867) ISU59_06265 PF01212 Beta-eliminating lyase ISU59_06275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU59_06275 PF00205 Thiamine pyrophosphate enzyme, central domain ISU59_06275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU59_06280 PF00970 Oxidoreductase FAD-binding domain ISU59_06280 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU59_06280 PF00175 Oxidoreductase NAD-binding domain ISU59_06285 PF03063 Prismane/CO dehydrogenase family ISU59_06290 PF03956 Lysine exporter LysO ISU59_06295 PF11398 Protein of unknown function (DUF2813) ISU59_06300 PF04393 Protein of unknown function (DUF535) ISU59_06305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_06310 PF12704 MacB-like periplasmic core domain ISU59_06310 PF02687 FtsX-like permease family ISU59_06310 PF00005 ABC transporter ISU59_06315 PF00313 'Cold-shock' DNA-binding domain ISU59_06320 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU59_06325 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_06325 PF07724 AAA domain (Cdc48 subfamily) ISU59_06325 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_06325 PF17871 AAA lid domain ISU59_06325 PF02861 Clp amino terminal domain, pathogenicity island component ISU59_06330 PF01797 Transposase IS200 like ISU59_06335 PF01176 Translation initiation factor 1A / IF-1 ISU59_06340 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU59_06345 PF00005 ABC transporter ISU59_06345 PF00664 ABC transporter transmembrane region ISU59_06350 PF00005 ABC transporter ISU59_06350 PF00664 ABC transporter transmembrane region ISU59_06355 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_06360 PF01037 Lrp/AsnC ligand binding domain ISU59_06365 PF01580 FtsK/SpoIIIE family ISU59_06365 PF17854 FtsK alpha domain ISU59_06365 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU59_06365 PF09397 Ftsk gamma domain ISU59_06370 PF03548 Outer membrane lipoprotein carrier protein LolA ISU59_06375 PF16193 AAA C-terminal domain ISU59_06375 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_06375 PF12002 MgsA AAA+ ATPase C terminal ISU59_06380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU59_06380 PF02403 Seryl-tRNA synthetase N-terminal domain ISU59_06395 PF00665 Integrase core domain ISU59_06395 PF02796 Helix-turn-helix domain of resolvase ISU59_06405 PF04055 Radical SAM superfamily ISU59_06415 PF01228 Glycine radical ISU59_06415 PF02901 Pyruvate formate lyase-like ISU59_06420 PF01226 Formate/nitrite transporter ISU59_06425 PF18381 YcaO cyclodehydratase C-terminal domain ISU59_06425 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU59_06430 PF17763 Glutaminase/Asparaginase C-terminal domain ISU59_06430 PF00710 Asparaginase, N-terminal ISU59_06435 PF05658 Head domain of trimeric autotransporter adhesin ISU59_06435 PF03895 YadA-like membrane anchor domain ISU59_06435 PF13018 Extended Signal Peptide of Type V secretion system ISU59_06435 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU59_06435 PF05658 Head domain of trimeric autotransporter adhesin ISU59_06435 PF03895 YadA-like membrane anchor domain ISU59_06435 PF13018 Extended Signal Peptide of Type V secretion system ISU59_06435 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU59_06445 PF00266 Aminotransferase class-V ISU59_06455 PF02224 Cytidylate kinase ISU59_06460 PF00575 S1 RNA binding domain ISU59_06465 PF00216 Bacterial DNA-binding protein ISU59_06470 PF00753 Metallo-beta-lactamase superfamily ISU59_06470 PF03772 Competence protein ISU59_06475 PF00005 ABC transporter ISU59_06475 PF00664 ABC transporter transmembrane region ISU59_06480 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU59_06485 PF07063 Domain of unknown function (DUF1338) ISU59_06490 PF00313 'Cold-shock' DNA-binding domain ISU59_06495 PF03966 Trm112p-like protein ISU59_06500 PF02348 Cytidylyltransferase ISU59_06505 PF01636 Phosphotransferase enzyme family ISU59_06510 PF13847 Methyltransferase domain ISU59_06515 PF03882 MukF winged-helix domain ISU59_06515 PF17193 MukF C-terminal domain ISU59_06515 PF17192 MukF middle domain ISU59_06520 PF04288 MukE-like family ISU59_06525 PF16330 MukB hinge domain ISU59_06525 PF04310 MukB N-terminal ISU59_06530 PF01797 Transposase IS200 like ISU59_06535 PF01471 Putative peptidoglycan binding domain ISU59_06535 PF03734 L,D-transpeptidase catalytic domain ISU59_06540 PF05951 Bacterial protein of unknown function (DUF882) ISU59_06545 PF00753 Metallo-beta-lactamase superfamily ISU59_06555 PF00155 Aminotransferase class I and II ISU59_06560 PF00267 Gram-negative porin ISU59_06565 PF01336 OB-fold nucleic acid binding domain ISU59_06565 PF00152 tRNA synthetases class II (D, K and N) ISU59_06570 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU59_06570 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU59_06575 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU59_06575 PF01433 Peptidase family M1 domain ISU59_06575 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU59_06580 PF01180 Dihydroorotate dehydrogenase ISU59_06585 PF07126 Cell-division protein ZapC ISU59_06590 PF03476 MOSC N-terminal beta barrel domain ISU59_06590 PF03473 MOSC domain ISU59_06590 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU59_06595 PF01170 Putative RNA methylase family UPF0020 ISU59_06595 PF10672 S-adenosylmethionine-dependent methyltransferase ISU59_06595 PF02926 THUMP domain ISU59_06600 PF00005 ABC transporter ISU59_06600 PF16326 ABC transporter C-terminal domain ISU59_06600 PF12848 ABC transporter ISU59_06605 PF04403 Paraquat-inducible protein A ISU59_06610 PF02470 MlaD protein ISU59_06615 PF03886 ABC-type transport auxiliary lipoprotein component ISU59_06620 PF04957 Ribosome modulation factor ISU59_06625 PF01797 Transposase IS200 like ISU59_06640 PF00665 Integrase core domain ISU59_06640 PF02796 Helix-turn-helix domain of resolvase ISU59_06655 PF07977 FabA-like domain ISU59_06660 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU59_06660 PF13654 AAA domain ISU59_06665 PF17414 MatP C-terminal ribbon-helix-helix domain ISU59_06665 PF06303 MatP N-terminal domain ISU59_06670 PF01797 Transposase IS200 like ISU59_06675 PF01389 OmpA-like transmembrane domain ISU59_06675 PF00691 OmpA family ISU59_06680 PF03846 Cell division inhibitor SulA ISU59_06685 PF04994 TfoX C-terminal domain ISU59_06685 PF04993 TfoX N-terminal domain ISU59_06690 PF12805 FUSC-like inner membrane protein yccS ISU59_06695 PF03733 Inner membrane component domain ISU59_06700 PF12462 DNA helicase IV / RNA helicase N terminal ISU59_06700 PF13361 UvrD-like helicase C-terminal domain ISU59_06700 PF00580 UvrD/REP helicase N-terminal domain ISU59_06705 PF02142 MGS-like domain ISU59_06710 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU59_06715 PF13380 CoA binding domain ISU59_06720 PF08755 Hemimethylated DNA-binding protein YccV like ISU59_06725 PF17785 PUA-like domain ISU59_06725 PF10672 S-adenosylmethionine-dependent methyltransferase ISU59_06730 PF00708 Acylphosphatase ISU59_06735 PF04358 DsrC like protein ISU59_06755 PF08031 Berberine and berberine like ISU59_06755 PF01565 FAD binding domain ISU59_06770 PF07977 FabA-like domain ISU59_06775 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU59_06775 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU59_06785 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU59_06785 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU59_06795 PF00378 Enoyl-CoA hydratase/isomerase ISU59_06810 PF00550 Phosphopantetheine attachment site ISU59_06815 PF00698 Acyl transferase domain ISU59_06825 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU59_06840 PF00691 OmpA family ISU59_06840 PF05736 OprF membrane domain ISU59_06850 PF07724 AAA domain (Cdc48 subfamily) ISU59_06850 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_06850 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_06850 PF17871 AAA lid domain ISU59_06855 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU59_06855 PF04717 Type VI secretion system, phage-baseplate injector ISU59_06855 PF13296 Putative type VI secretion system Rhs element Vgr ISU59_06945 PF00005 ABC transporter ISU59_06945 PF12848 ABC transporter ISU59_06955 PF00872 Transposase, Mutator family ISU59_06960 PF00899 ThiF family ISU59_06965 PF00994 Probable molybdopterin binding domain ISU59_06965 PF03453 MoeA N-terminal region (domain I and II) ISU59_06965 PF03454 MoeA C-terminal region (domain IV) ISU59_06975 PF00005 ABC transporter ISU59_06980 PF13533 Biotin-lipoyl like ISU59_06995 PF00756 Putative esterase ISU59_07000 PF00107 Zinc-binding dehydrogenase ISU59_07000 PF08240 Alcohol dehydrogenase GroES-like domain ISU59_07010 PF06779 Uncharacterised MFS-type transporter YbfB ISU59_07015 PF01227 GTP cyclohydrolase I ISU59_07020 PF04235 Protein of unknown function (DUF418) ISU59_07025 PF13407 Periplasmic binding protein domain ISU59_07030 PF00005 ABC transporter ISU59_07035 PF02653 Branched-chain amino acid transport system / permease component ISU59_07040 PF02698 DUF218 domain ISU59_07045 PF03949 Malic enzyme, NAD binding domain ISU59_07045 PF00390 Malic enzyme, N-terminal domain ISU59_07050 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU59_07050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU59_07055 PF04172 LrgB-like family ISU59_07060 PF03788 LrgA family ISU59_07065 PF07690 Major Facilitator Superfamily ISU59_07085 PF01797 Transposase IS200 like ISU59_07090 PF09334 tRNA synthetases class I (M) ISU59_07090 PF01588 Putative tRNA binding domain ISU59_07095 PF10609 NUBPL iron-transfer P-loop NTPase ISU59_07100 PF00485 Phosphoribulokinase / Uridine kinase family ISU59_07105 PF00692 dUTPase ISU59_07110 PF05170 AsmA family ISU59_07115 PF03741 Integral membrane protein TerC family ISU59_07115 PF00571 CBS domain ISU59_07115 PF03471 Transporter associated domain ISU59_07120 PF06276 Ferric iron reductase FhuF-like transporter ISU59_07120 PF11575 FhuF 2Fe-2S C-terminal domain ISU59_07125 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU59_07130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU59_07140 PF04183 IucA / IucC family ISU59_07140 PF06276 Ferric iron reductase FhuF-like transporter ISU59_07145 PF00005 ABC transporter ISU59_07150 PF01032 FecCD transport family ISU59_07155 PF01032 FecCD transport family ISU59_07160 PF01497 Periplasmic binding protein ISU59_07165 PF07715 TonB-dependent Receptor Plug Domain ISU59_07165 PF07660 Secretin and TonB N terminus short domain ISU59_07165 PF00593 TonB dependent receptor ISU59_07170 PF06276 Ferric iron reductase FhuF-like transporter ISU59_07170 PF04183 IucA / IucC family ISU59_07175 PF00483 Nucleotidyl transferase ISU59_07180 PF00483 Nucleotidyl transferase ISU59_07185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU59_07185 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU59_07190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU59_07190 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU59_07195 PF00977 Histidine biosynthesis protein ISU59_07200 PF00977 Histidine biosynthesis protein ISU59_07205 PF00117 Glutamine amidotransferase class-I ISU59_07210 PF00475 Imidazoleglycerol-phosphate dehydratase ISU59_07215 PF00155 Aminotransferase class I and II ISU59_07220 PF00815 Histidinol dehydrogenase ISU59_07225 PF01634 ATP phosphoribosyltransferase ISU59_07225 PF08029 HisG, C-terminal domain ISU59_07235 PF01370 NAD dependent epimerase/dehydratase family ISU59_07250 PF02653 Branched-chain amino acid transport system / permease component ISU59_07255 PF00005 ABC transporter ISU59_07260 PF00005 ABC transporter ISU59_07265 PF00465 Iron-containing alcohol dehydrogenase ISU59_07270 PF13520 Amino acid permease ISU59_07280 PF00929 Exonuclease ISU59_07280 PF08411 Exonuclease C-terminal ISU59_07290 PF04363 Protein of unknown function (DUF496) ISU59_07295 PF00872 Transposase, Mutator family ISU59_07300 PF09134 Invasin, domain 3 ISU59_07300 PF11924 Inverse autotransporter, beta-domain ISU59_07300 PF02369 Bacterial Ig-like domain (group 1) ISU59_07310 PF07690 Major Facilitator Superfamily ISU59_07315 PF04134 Protein of unknown function, DUF393 ISU59_07325 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU59_07330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU59_07330 PF13378 Enolase C-terminal domain-like ISU59_07335 PF01070 FMN-dependent dehydrogenase ISU59_07340 PF00764 Arginosuccinate synthase ISU59_07345 PF01554 MatE ISU59_07355 PF01522 Polysaccharide deacetylase ISU59_07365 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU59_07375 PF00072 Response regulator receiver domain ISU59_07375 PF00196 Bacterial regulatory proteins, luxR family ISU59_07380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU59_07390 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU59_07395 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU59_07395 PF01648 4'-phosphopantetheinyl transferase superfamily ISU59_07405 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU59_07405 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU59_07410 PF01306 LacY proton/sugar symporter ISU59_07415 PF00872 Transposase, Mutator family ISU59_07425 PF00665 Integrase core domain ISU59_07425 PF02796 Helix-turn-helix domain of resolvase ISU59_07435 PF00356 Bacterial regulatory proteins, lacI family ISU59_07435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU59_07445 PF06167 Glucose-regulated metallo-peptidase M90 ISU59_07460 PF00664 ABC transporter transmembrane region ISU59_07460 PF00005 ABC transporter ISU59_07470 PF12833 Helix-turn-helix domain ISU59_07475 PF10964 Protein of unknown function (DUF2766) ISU59_07480 PF13996 YobH-like protein ISU59_07485 PF13998 MgrB protein ISU59_07490 PF13974 YebO-like protein ISU59_07505 PF00324 Amino acid permease ISU59_07510 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU59_07515 PF10736 Protein of unknown function (DUF2627) ISU59_07520 PF00313 'Cold-shock' DNA-binding domain ISU59_07525 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU59_07530 PF13847 Methyltransferase domain ISU59_07540 PF13426 PAS domain ISU59_07540 PF08448 PAS fold ISU59_07540 PF08447 PAS fold ISU59_07540 PF05231 MASE1 ISU59_07540 PF00563 EAL domain ISU59_07540 PF00990 Diguanylate cyclase, GGDEF domain ISU59_07545 PF07715 TonB-dependent Receptor Plug Domain ISU59_07545 PF00593 TonB dependent receptor ISU59_07550 PF02659 Putative manganese efflux pump ISU59_07555 PF06173 Protein of unknown function (DUF986) ISU59_07560 PF03613 PTS system mannose/fructose/sorbose family IID component ISU59_07565 PF03609 PTS system sorbose-specific iic component ISU59_07570 PF03610 PTS system fructose IIA component ISU59_07570 PF03830 PTS system sorbose subfamily IIB component ISU59_07580 PF01047 MarR family ISU59_07585 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU59_07590 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU59_07595 PF00171 Aldehyde dehydrogenase family ISU59_07600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU59_07605 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU59_07610 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU59_07615 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU59_07620 PF07690 Major Facilitator Superfamily ISU59_07625 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU59_07625 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU59_07630 PF01613 Flavin reductase like domain ISU59_07635 PF03315 Serine dehydratase beta chain ISU59_07635 PF03313 Serine dehydratase alpha chain ISU59_07640 PF00293 NUDIX domain ISU59_07645 PF04715 Anthranilate synthase component I, N terminal region ISU59_07645 PF00425 chorismate binding enzyme ISU59_07650 PF03701 Uncharacterised protein family (UPF0181) ISU59_07655 PF02222 ATP-grasp domain ISU59_07660 PF03880 DbpA RNA binding domain ISU59_07660 PF00270 DEAD/DEAH box helicase ISU59_07660 PF00271 Helicase conserved C-terminal domain ISU59_07665 PF07130 YebG protein ISU59_07670 PF04266 ASCH domain ISU59_07675 PF13995 YebF-like protein ISU59_07680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU59_07680 PF00326 Prolyl oligopeptidase family ISU59_07685 PF00561 alpha/beta hydrolase fold ISU59_07690 PF06440 DNA polymerase III, theta subunit ISU59_07695 PF00210 Ferritin-like domain ISU59_07700 PF04234 CopC domain ISU59_07710 PF10709 Protein of unknown function (DUF2511) ISU59_07725 PF01312 FlhB HrpN YscU SpaS Family ISU59_07730 PF00771 FHIPEP family ISU59_07735 PF06366 Flagellar protein FlhE ISU59_07745 PF01797 Transposase IS200 like ISU59_07755 PF05130 FlgN protein ISU59_07760 PF04316 Anti-sigma-28 factor, FlgM ISU59_07765 PF17656 FlgA N-terminal domain ISU59_07765 PF13144 Chaperone for flagella basal body P-ring formation ISU59_07770 PF00460 Flagella basal body rod protein ISU59_07775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_07775 PF00460 Flagella basal body rod protein ISU59_07780 PF03963 Flagellar hook capping protein - N-terminal region ISU59_07780 PF13861 FlgD Tudor-like domain ISU59_07780 PF13860 FlgD Ig-like domain ISU59_07785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_07785 PF00460 Flagella basal body rod protein ISU59_07785 PF07559 Flagellar basal body protein FlaE ISU59_07800 PF02107 Flagellar L-ring protein ISU59_07805 PF02119 Flagellar P-ring protein ISU59_07810 PF10135 Rod binding protein ISU59_07810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU59_07815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU59_07815 PF00460 Flagella basal body rod protein ISU59_07820 PF00669 Bacterial flagellin N-terminal helical region ISU59_07825 PF04198 Putative sugar-binding domain ISU59_07830 PF00596 Class II Aldolase and Adducin N-terminal domain ISU59_07835 PF02653 Branched-chain amino acid transport system / permease component ISU59_07840 PF13407 Periplasmic binding protein domain ISU59_07845 PF00005 ABC transporter ISU59_07850 PF02653 Branched-chain amino acid transport system / permease component ISU59_07855 PF00294 pfkB family carbohydrate kinase ISU59_07870 PF01311 Bacterial export proteins, family 1 ISU59_07875 PF01313 Bacterial export proteins, family 3 ISU59_07880 PF00813 FliP family ISU59_07885 PF04347 Flagellar biosynthesis protein, FliO ISU59_07890 PF16973 Flagellar motor switch protein FliN N-terminal ISU59_07890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU59_07895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU59_07895 PF02154 Flagellar motor switch protein FliM ISU59_07900 PF03748 Flagellar basal body-associated protein FliL ISU59_07905 PF02120 Flagellar hook-length control protein FliK ISU59_07910 PF02050 Flagellar FliJ protein ISU59_07915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU59_07915 PF18269 T3SS EscN ATPase C-terminal domain ISU59_07920 PF02108 Flagellar assembly protein FliH ISU59_07925 PF01706 FliG C-terminal domain ISU59_07925 PF14841 FliG middle domain ISU59_07925 PF14842 FliG N-terminal domain ISU59_07930 PF01514 Secretory protein of YscJ/FliF family ISU59_07930 PF08345 Flagellar M-ring protein C-terminal ISU59_07935 PF02049 Flagellar hook-basal body complex protein FliE ISU59_07955 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU59_07960 PF01966 HD domain ISU59_07965 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU59_07965 PF00672 HAMP domain ISU59_07965 PF02743 Cache domain ISU59_07970 PF12833 Helix-turn-helix domain ISU59_07975 PF05400 Flagellar protein FliT ISU59_07980 PF02561 Flagellar protein FliS ISU59_07985 PF02465 Flagellar hook-associated protein 2 N-terminus ISU59_07985 PF07195 Flagellar hook-associated protein 2 C-terminus ISU59_07985 PF07196 Flagellin hook IN motif ISU59_07990 PF00700 Bacterial flagellin C-terminal helical region ISU59_07990 PF08884 Flagellin D3 domain ISU59_07990 PF00669 Bacterial flagellin N-terminal helical region ISU59_07995 PF04545 Sigma-70, region 4 ISU59_07995 PF04542 Sigma-70 region 2 ISU59_07995 PF04539 Sigma-70 region 3 ISU59_08000 PF02899 Phage integrase, N-terminal SAM-like domain ISU59_08005 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_08010 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_08015 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_08020 PF00005 ABC transporter ISU59_08035 PF01619 Proline dehydrogenase ISU59_08035 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU59_08035 PF14850 DNA-binding domain of Proline dehydrogenase ISU59_08035 PF00171 Aldehyde dehydrogenase family ISU59_08045 PF00474 Sodium:solute symporter family ISU59_08050 PF03239 Iron permease FTR1 family ISU59_08055 PF13473 Cupredoxin-like domain ISU59_08055 PF09375 Imelysin ISU59_08060 PF04261 Dyp-type peroxidase family ISU59_08065 PF03358 NADPH-dependent FMN reductase ISU59_08070 PF01344 Kelch motif ISU59_08075 PF00324 Amino acid permease ISU59_08085 PF13505 Outer membrane protein beta-barrel domain ISU59_08095 PF06942 GlpM protein ISU59_08100 PF10769 Protein of unknown function (DUF2594) ISU59_08105 PF00196 Bacterial regulatory proteins, luxR family ISU59_08105 PF00072 Response regulator receiver domain ISU59_08110 PF01541 GIY-YIG catalytic domain ISU59_08110 PF02151 UvrB/uvrC motif ISU59_08110 PF08459 UvrC Helix-hairpin-helix N-terminal ISU59_08115 PF01066 CDP-alcohol phosphatidyltransferase ISU59_08160 PF05638 Type VI secretion system effector, Hcp ISU59_08230 PF07702 UTRA domain ISU59_08230 PF00392 Bacterial regulatory proteins, gntR family ISU59_08235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU59_08235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU59_08245 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_08250 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_08255 PF00005 ABC transporter ISU59_08255 PF08402 TOBE domain ISU59_08275 PF02796 Helix-turn-helix domain of resolvase ISU59_08275 PF00665 Integrase core domain ISU59_08280 PF01695 IstB-like ATP binding protein ISU59_08315 PF00593 TonB dependent receptor ISU59_08315 PF07715 TonB-dependent Receptor Plug Domain ISU59_08320 PF00501 AMP-binding enzyme ISU59_08320 PF13193 AMP-binding enzyme C-terminal domain ISU59_08325 PF00975 Thioesterase domain ISU59_08335 PF00668 Condensation domain ISU59_08335 PF00698 Acyl transferase domain ISU59_08335 PF00550 Phosphopantetheine attachment site ISU59_08335 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU59_08335 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU59_08335 PF16197 Ketoacyl-synthetase C-terminal extension ISU59_08340 PF08242 Methyltransferase domain ISU59_08340 PF00501 AMP-binding enzyme ISU59_08340 PF00668 Condensation domain ISU59_08340 PF00550 Phosphopantetheine attachment site ISU59_08350 PF04954 Siderophore-interacting protein ISU59_08350 PF08021 Siderophore-interacting FAD-binding domain ISU59_08350 PF00005 ABC transporter ISU59_08350 PF00664 ABC transporter transmembrane region ISU59_08355 PF00005 ABC transporter ISU59_08355 PF00664 ABC transporter transmembrane region ISU59_08360 PF07690 Major Facilitator Superfamily ISU59_08365 PF00425 chorismate binding enzyme ISU59_08370 PF13356 Arm DNA-binding domain ISU59_08370 PF00589 Phage integrase family ISU59_08380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_08380 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_08390 PF00577 Outer membrane usher protein ISU59_08390 PF13954 PapC N-terminal domain ISU59_08390 PF13953 PapC C-terminal domain ISU59_08395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_08395 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_08405 PF01627 Hpt domain ISU59_08405 PF00989 PAS fold ISU59_08405 PF00072 Response regulator receiver domain ISU59_08405 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_08405 PF00512 His Kinase A (phospho-acceptor) domain ISU59_08410 PF00072 Response regulator receiver domain ISU59_08410 PF00196 Bacterial regulatory proteins, luxR family ISU59_08415 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISU59_08415 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISU59_08420 PF01575 MaoC like domain ISU59_08425 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU59_08430 PF03466 LysR substrate binding domain ISU59_08430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_08445 PF07690 Major Facilitator Superfamily ISU59_08450 PF04909 Amidohydrolase ISU59_08460 PF02508 Rnf-Nqr subunit, membrane protein ISU59_08465 PF00155 Aminotransferase class I and II ISU59_08470 PF00324 Amino acid permease ISU59_08475 PF00455 DeoR C terminal sensor domain ISU59_08475 PF08220 DeoR-like helix-turn-helix domain ISU59_08485 PF04960 Glutaminase ISU59_08500 PF03239 Iron permease FTR1 family ISU59_08505 PF10634 Fe2+ transport protein ISU59_08515 PF12704 MacB-like periplasmic core domain ISU59_08515 PF00005 ABC transporter ISU59_08515 PF02687 FtsX-like permease family ISU59_08525 PF12704 MacB-like periplasmic core domain ISU59_08525 PF00005 ABC transporter ISU59_08525 PF02687 FtsX-like permease family ISU59_08530 PF00578 AhpC/TSA family ISU59_08540 PF09313 Domain of unknown function (DUF1971) ISU59_08540 PF03848 Tellurite resistance protein TehB ISU59_08545 PF00557 Metallopeptidase family M24 ISU59_08555 PF01522 Polysaccharide deacetylase ISU59_08555 PF14883 Hypothetical glycosyl hydrolase family 13 ISU59_08560 PF00535 Glycosyl transferase family 2 ISU59_08565 PF13994 PgaD-like protein ISU59_08580 PF02562 PhoH-like protein ISU59_08585 PF01699 Sodium/calcium exchanger protein ISU59_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_08590 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU59_08590 PF00672 HAMP domain ISU59_08590 PF07730 Histidine kinase ISU59_08600 PF00392 Bacterial regulatory proteins, gntR family ISU59_08600 PF00155 Aminotransferase class I and II ISU59_08605 PF00202 Aminotransferase class-III ISU59_08615 PF00171 Aldehyde dehydrogenase family ISU59_08620 PF04996 Succinylarginine dihydrolase ISU59_08625 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU59_08635 PF00665 Integrase core domain ISU59_08635 PF02796 Helix-turn-helix domain of resolvase ISU59_08640 PF01695 IstB-like ATP binding protein ISU59_08655 PF01979 Amidohydrolase family ISU59_08665 PF01979 Amidohydrolase family ISU59_08670 PF05962 HutD ISU59_08680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU59_08680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU59_08685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU59_08685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU59_08690 PF01370 NAD dependent epimerase/dehydratase family ISU59_08735 PF00872 Transposase, Mutator family ISU59_08755 PF08242 Methyltransferase domain ISU59_08800 PF00512 His Kinase A (phospho-acceptor) domain ISU59_08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_08800 PF00672 HAMP domain ISU59_08805 PF00072 Response regulator receiver domain ISU59_08805 PF00486 Transcriptional regulatory protein, C terminal ISU59_08810 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU59_08850 PF06071 Protein of unknown function (DUF933) ISU59_08850 PF01926 50S ribosome-binding GTPase ISU59_08855 PF01195 Peptidyl-tRNA hydrolase ISU59_08860 PF10762 Protein of unknown function (DUF2583) ISU59_08865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU59_08865 PF14572 Phosphoribosyl synthetase-associated domain ISU59_08870 PF00288 GHMP kinases N terminal domain ISU59_08870 PF08544 GHMP kinases C terminal ISU59_08875 PF03550 Outer membrane lipoprotein LolB ISU59_08880 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU59_08880 PF01488 Shikimate / quinate 5-dehydrogenase ISU59_08880 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU59_08885 PF03462 PCRF domain ISU59_08885 PF00472 RF-1 domain ISU59_08890 PF13847 Methyltransferase domain ISU59_08890 PF17827 PrmC N-terminal domain ISU59_08895 PF04247 Invasion gene expression up-regulator, SirB ISU59_08900 PF13369 Transglutaminase-like superfamily ISU59_08905 PF00793 DAHP synthetase I family ISU59_08910 PF01740 STAS domain ISU59_08910 PF00916 Sulfate permease family ISU59_08920 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU59_08930 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_08935 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_08940 PF00005 ABC transporter ISU59_08940 PF08402 TOBE domain ISU59_08945 PF01797 Transposase IS200 like ISU59_08955 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU59_08960 PF00480 ROK family ISU59_08960 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU59_08970 PF02811 PHP domain ISU59_08975 PF02613 Nitrate reductase delta subunit ISU59_08980 PF07273 Protein of unknown function (DUF1439) ISU59_08990 PF13302 Acetyltransferase (GNAT) domain ISU59_08995 PF04337 Protein of unknown function, DUF480 ISU59_09000 PF03023 Lipid II flippase MurJ ISU59_09015 PF03485 Arginyl tRNA synthetase N terminal domain ISU59_09015 PF05746 DALR anticodon binding domain ISU59_09015 PF00750 tRNA synthetases class I (R) ISU59_09020 PF06185 YecM protein ISU59_09025 PF03932 CutC family ISU59_09030 PF08003 Protein of unknown function (DUF1698) ISU59_09035 PF13649 Methyltransferase domain ISU59_09040 PF01124 MAPEG family ISU59_09045 PF01904 Protein of unknown function DUF72 ISU59_09050 PF02938 GAD domain ISU59_09050 PF00152 tRNA synthetases class II (D, K and N) ISU59_09050 PF01336 OB-fold nucleic acid binding domain ISU59_09055 PF00293 NUDIX domain ISU59_09060 PF01709 Transcriptional regulator ISU59_09065 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU59_09070 PF07499 RuvA, C-terminal domain ISU59_09070 PF01330 RuvA N terminal domain ISU59_09075 PF17864 RuvB AAA lid domain ISU59_09075 PF05491 RuvB C-terminal winged helix domain ISU59_09075 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU59_09080 PF00950 ABC 3 transport family ISU59_09085 PF00005 ABC transporter ISU59_09090 PF01297 Zinc-uptake complex component A periplasmic ISU59_09095 PF01476 LysM domain ISU59_09095 PF01551 Peptidase family M23 ISU59_09095 PF08525 Opacity-associated protein A N-terminal motif ISU59_09100 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU59_09110 PF02887 Pyruvate kinase, alpha/beta domain ISU59_09110 PF00224 Pyruvate kinase, barrel domain ISU59_09115 PF01418 Helix-turn-helix domain, rpiR family ISU59_09115 PF01380 SIS domain ISU59_09120 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU59_09120 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU59_09125 PF01081 KDPG and KHG aldolase ISU59_09130 PF00893 Small Multidrug Resistance protein ISU59_09135 PF00893 Small Multidrug Resistance protein ISU59_09140 PF01042 Endoribonuclease L-PSP ISU59_09145 PF13307 Helicase C-terminal domain ISU59_09145 PF04851 Type III restriction enzyme, res subunit ISU59_09150 PF00814 Glycoprotease family ISU59_09155 PF03843 Outer membrane lipoprotein Slp family ISU59_09165 PF00501 AMP-binding enzyme ISU59_09165 PF13193 AMP-binding enzyme C-terminal domain ISU59_09175 PF03776 Septum formation topological specificity factor MinE ISU59_09180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU59_09185 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU59_09185 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU59_09190 PF05166 YcgL domain ISU59_09195 PF13406 Transglycosylase SLT domain ISU59_09200 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU59_09205 PF03692 Putative zinc- or iron-chelating domain ISU59_09210 PF12167 Arm DNA-binding domain ISU59_09210 PF00589 Phage integrase family ISU59_09215 PF00665 Integrase core domain ISU59_09215 PF02796 Helix-turn-helix domain of resolvase ISU59_09220 PF01695 IstB-like ATP binding protein ISU59_09235 PF05772 NinB protein ISU59_09245 PF06530 Phage antitermination protein Q ISU59_09310 PF00872 Transposase, Mutator family ISU59_09465 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU59_09470 PF00872 Transposase, Mutator family ISU59_09480 PF00266 Aminotransferase class-V ISU59_09495 PF02600 Disulfide bond formation protein DsbB ISU59_09500 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ISU59_09505 PF00392 Bacterial regulatory proteins, gntR family ISU59_09505 PF07840 FadR C-terminal domain ISU59_09510 PF04293 SpoVR like protein ISU59_09515 PF01266 FAD dependent oxidoreductase ISU59_09520 PF07690 Major Facilitator Superfamily ISU59_09525 PF05726 Pirin C-terminal cupin domain ISU59_09525 PF02678 Pirin ISU59_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_09530 PF03466 LysR substrate binding domain ISU59_09540 PF04285 Protein of unknown function (DUF444) ISU59_09545 PF08298 PrkA AAA domain ISU59_09545 PF06798 PrkA serine protein kinase C-terminal domain ISU59_09550 PF06629 MltA-interacting protein MipA ISU59_09555 PF01263 Aldose 1-epimerase ISU59_09560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU59_09560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU59_09565 PF01641 SelR domain ISU59_09570 PF07023 Protein of unknown function (DUF1315) ISU59_09575 PF00857 Isochorismatase family ISU59_09580 PF17763 Glutaminase/Asparaginase C-terminal domain ISU59_09580 PF00710 Asparaginase, N-terminal ISU59_09585 PF01343 Peptidase family S49 ISU59_09590 PF00881 Nitroreductase family ISU59_09600 PF01131 DNA topoisomerase ISU59_09600 PF01751 Toprim domain ISU59_09605 PF07383 Protein of unknown function (DUF1496) ISU59_09610 PF00293 NUDIX domain ISU59_09615 PF03372 Endonuclease/Exonuclease/phosphatase family ISU59_09620 PF03466 LysR substrate binding domain ISU59_09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_09640 PF00872 Transposase, Mutator family ISU59_09645 PF00551 Formyl transferase ISU59_09645 PF01842 ACT domain ISU59_09650 PF02810 SEC-C motif ISU59_09655 PF00072 Response regulator receiver domain ISU59_09660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU59_09660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU59_09660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU59_09665 PF00816 H-NS histone family ISU59_09670 PF00265 Thymidine kinase ISU59_09675 PF01695 IstB-like ATP binding protein ISU59_09680 PF02796 Helix-turn-helix domain of resolvase ISU59_09680 PF00665 Integrase core domain ISU59_09685 PF01797 Transposase IS200 like ISU59_09690 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU59_09695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_09695 PF00672 HAMP domain ISU59_09695 PF00512 His Kinase A (phospho-acceptor) domain ISU59_09700 PF00072 Response regulator receiver domain ISU59_09700 PF00486 Transcriptional regulatory protein, C terminal ISU59_09710 PF13520 Amino acid permease ISU59_09715 PF07338 Protein of unknown function (DUF1471) ISU59_09720 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU59_09720 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU59_09720 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU59_09725 PF02233 NAD(P) transhydrogenase beta subunit ISU59_09730 PF00582 Universal stress protein family ISU59_09735 PF13545 Crp-like helix-turn-helix domain ISU59_09735 PF00027 Cyclic nucleotide-binding domain ISU59_09740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU59_09740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU59_09745 PF00245 Alkaline phosphatase ISU59_09760 PF13419 Haloacid dehalogenase-like hydrolase ISU59_09765 PF01842 ACT domain ISU59_09770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU59_09770 PF00205 Thiamine pyrophosphate enzyme, central domain ISU59_09770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU59_09800 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU59_09800 PF01048 Phosphorylase superfamily ISU59_09810 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_09815 PF09084 NMT1/THI5 like ISU59_09830 PF00356 Bacterial regulatory proteins, lacI family ISU59_09835 PF00654 Voltage gated chloride channel ISU59_09845 PF00480 ROK family ISU59_09850 PF03466 LysR substrate binding domain ISU59_09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_09860 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU59_09865 PF10415 Fumarase C C-terminus ISU59_09865 PF00206 Lyase ISU59_09870 PF01238 Phosphomannose isomerase type I ISU59_09875 PF06097 Bacterial protein of unknown function (DUF945) ISU59_09885 PF13593 SBF-like CPA transporter family (DUF4137) ISU59_09890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU59_09890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU59_09895 PF12833 Helix-turn-helix domain ISU59_09895 PF02311 AraC-like ligand binding domain ISU59_09900 PF02653 Branched-chain amino acid transport system / permease component ISU59_09905 PF00005 ABC transporter ISU59_09910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU59_09915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_09920 PF11762 L-arabinose isomerase C-terminal domain ISU59_09920 PF02610 L-arabinose isomerase ISU59_09925 PF00664 ABC transporter transmembrane region ISU59_09925 PF00005 ABC transporter ISU59_09925 PF03412 Peptidase C39 family ISU59_09935 PF13533 Biotin-lipoyl like ISU59_09940 PF00005 ABC transporter ISU59_09940 PF00664 ABC transporter transmembrane region ISU59_09945 PF03412 Peptidase C39 family ISU59_09945 PF00664 ABC transporter transmembrane region ISU59_09945 PF00005 ABC transporter ISU59_09950 PF10754 Protein of unknown function (DUF2569) ISU59_09955 PF02508 Rnf-Nqr subunit, membrane protein ISU59_09960 PF04060 Putative Fe-S cluster ISU59_09965 PF10531 SLBB domain ISU59_09965 PF13237 4Fe-4S dicluster domain ISU59_09965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU59_09965 PF13375 RnfC Barrel sandwich hybrid domain ISU59_09970 PF06445 GyrI-like small molecule binding domain ISU59_09970 PF12833 Helix-turn-helix domain ISU59_09975 PF03116 NQR2, RnfD, RnfE family ISU59_09980 PF04205 FMN-binding domain ISU59_09985 PF02508 Rnf-Nqr subunit, membrane protein ISU59_09990 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU59_09990 PF00633 Helix-hairpin-helix motif ISU59_09990 PF10576 Iron-sulfur binding domain of endonuclease III ISU59_09995 PF01370 NAD dependent epimerase/dehydratase family ISU59_10000 PF07690 Major Facilitator Superfamily ISU59_10005 PF17876 Cold shock domain ISU59_10005 PF08206 Ribonuclease B OB domain ISU59_10005 PF00773 RNB domain ISU59_10005 PF00575 S1 RNA binding domain ISU59_10010 PF13722 5TM C-terminal transporter carbon starvation CstA ISU59_10010 PF02554 Carbon starvation protein CstA ISU59_10015 PF04328 Selenoprotein, putative ISU59_10020 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU59_10030 PF00596 Class II Aldolase and Adducin N-terminal domain ISU59_10035 PF05433 Glycine zipper 2TM domain ISU59_10040 PF01253 Translation initiation factor SUI1 ISU59_10045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU59_10055 PF18073 Rubredoxin metal binding domain ISU59_10060 PF06305 Lipopolysaccharide assembly protein A domain ISU59_10065 PF01569 PAP2 superfamily ISU59_10070 PF00925 GTP cyclohydrolase II ISU59_10075 PF00330 Aconitase family (aconitate hydratase) ISU59_10075 PF00694 Aconitase C-terminal domain ISU59_10085 PF03466 LysR substrate binding domain ISU59_10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_10090 PF01131 DNA topoisomerase ISU59_10090 PF08272 Topoisomerase I zinc-ribbon-like ISU59_10090 PF01751 Toprim domain ISU59_10090 PF01396 Topoisomerase DNA binding C4 zinc finger ISU59_10100 PF10692 Protein of unknown function (DUF2498) ISU59_10105 PF01343 Peptidase family S49 ISU59_10105 PF08496 Peptidase family S49 N-terminal ISU59_10110 PF00106 short chain dehydrogenase ISU59_10115 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU59_10120 PF01479 S4 domain ISU59_10120 PF00849 RNA pseudouridylate synthase ISU59_10125 PF01300 Telomere recombination ISU59_10130 PF02811 PHP domain ISU59_10140 PF04715 Anthranilate synthase component I, N terminal region ISU59_10140 PF00425 chorismate binding enzyme ISU59_10145 PF00117 Glutamine amidotransferase class-I ISU59_10150 PF02885 Glycosyl transferase family, helical bundle domain ISU59_10150 PF00591 Glycosyl transferase family, a/b domain ISU59_10155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU59_10155 PF00218 Indole-3-glycerol phosphate synthase ISU59_10160 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_10165 PF00290 Tryptophan synthase alpha chain ISU59_10175 PF03922 OmpW family ISU59_10200 PF04279 Intracellular septation protein A ISU59_10205 PF03061 Thioesterase superfamily ISU59_10210 PF00872 Transposase, Mutator family ISU59_10215 PF03544 Gram-negative bacterial TonB protein C-terminal ISU59_10220 PF03795 YCII-related domain ISU59_10235 PF13505 Outer membrane protein beta-barrel domain ISU59_10250 PF13396 Phospholipase_D-nuclease N-terminal ISU59_10250 PF13091 PLD-like domain ISU59_10255 PF04269 Protein of unknown function, DUF440 ISU59_10265 PF00005 ABC transporter ISU59_10265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_10270 PF00005 ABC transporter ISU59_10270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_10275 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU59_10275 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_10280 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_10285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_10290 PF01914 MarC family integral membrane protein ISU59_10295 PF00465 Iron-containing alcohol dehydrogenase ISU59_10295 PF00171 Aldehyde dehydrogenase family ISU59_10300 PF00665 Integrase core domain ISU59_10300 PF02796 Helix-turn-helix domain of resolvase ISU59_10305 PF01695 IstB-like ATP binding protein ISU59_10335 PF00089 Trypsin ISU59_10350 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU59_10350 PF11898 Domain of unknown function (DUF3418) ISU59_10350 PF00271 Helicase conserved C-terminal domain ISU59_10350 PF04408 Helicase associated domain (HA2) ISU59_10350 PF00270 DEAD/DEAH box helicase ISU59_10355 PF02525 Flavodoxin-like fold ISU59_10360 PF04198 Putative sugar-binding domain ISU59_10360 PF00325 Bacterial regulatory proteins, crp family ISU59_10365 PF01232 Mannitol dehydrogenase Rossmann domain ISU59_10365 PF08125 Mannitol dehydrogenase C-terminal domain ISU59_10370 PF07027 Protein of unknown function (DUF1318) ISU59_10375 PF13617 YnbE-like lipoprotein ISU59_10380 PF11739 Dicarboxylate transport ISU59_10385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU59_10385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU59_10390 PF03724 META domain ISU59_10395 PF03891 Domain of unknown function (DUF333) ISU59_10400 PF02308 MgtC family ISU59_10405 PF00893 Small Multidrug Resistance protein ISU59_10410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU59_10410 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU59_10410 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU59_10410 PF10371 Domain of unknown function ISU59_10410 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU59_10415 PF01171 PP-loop family ISU59_10420 PF07859 alpha/beta hydrolase fold ISU59_10430 PF01544 CorA-like Mg2+ transporter protein ISU59_10435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_10440 PF00246 Zinc carboxypeptidase ISU59_10445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU59_10445 PF13378 Enolase C-terminal domain-like ISU59_10450 PF08534 Redoxin ISU59_10455 PF01797 Transposase IS200 like ISU59_10460 PF18024 Helix-turn-helix domain ISU59_10460 PF00158 Sigma-54 interaction domain ISU59_10465 PF09722 Protein of unknown function (DUF2384) ISU59_10470 PF08808 RES domain ISU59_10475 PF05128 Domain of unknown function (DUF697) ISU59_10480 PF04317 YcjX-like family, DUF463 ISU59_10490 PF04024 PspC domain ISU59_10495 PF06667 Phage shock protein B ISU59_10500 PF04012 PspA/IM30 family ISU59_10505 PF00158 Sigma-54 interaction domain ISU59_10505 PF02954 Bacterial regulatory protein, Fis family ISU59_10510 PF01797 Transposase IS200 like ISU59_10515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_10520 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_10525 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU59_10525 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_10530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_10530 PF00005 ABC transporter ISU59_10535 PF00005 ABC transporter ISU59_10545 PF00854 POT family ISU59_10550 PF04893 Yip1 domain ISU59_10555 PF11656 YjbD family (DUF3811) ISU59_10560 PF00043 Glutathione S-transferase, C-terminal domain ISU59_10560 PF02798 Glutathione S-transferase, N-terminal domain ISU59_10565 PF08543 Phosphomethylpyrimidine kinase ISU59_10570 PF00579 tRNA synthetases class I (W and Y) ISU59_10570 PF01479 S4 domain ISU59_10575 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU59_10575 PF01243 Pyridoxamine 5'-phosphate oxidase ISU59_10580 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU59_10585 PF03702 Anhydro-N-acetylmuramic acid kinase ISU59_10590 PF05433 Glycine zipper 2TM domain ISU59_10595 PF01047 MarR family ISU59_10600 PF08019 Phosphoethanolamine transferase EptA/EptB ISU59_10600 PF00884 Sulfatase ISU59_10605 PF00440 Bacterial regulatory proteins, tetR family ISU59_10605 PF16925 Tetracyclin repressor-like, C-terminal domain ISU59_10615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU59_10620 PF00929 Exonuclease ISU59_10630 PF00462 Glutaredoxin ISU59_10635 PF00877 NlpC/P60 family ISU59_10640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU59_10640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU59_10650 PF00356 Bacterial regulatory proteins, lacI family ISU59_10655 PF03466 LysR substrate binding domain ISU59_10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_10660 PF07690 Major Facilitator Superfamily ISU59_10670 PF00677 Lumazine binding domain ISU59_10680 PF01554 MatE ISU59_10695 PF02887 Pyruvate kinase, alpha/beta domain ISU59_10695 PF00224 Pyruvate kinase, barrel domain ISU59_10700 PF04728 Lipoprotein leucine-zipper ISU59_10705 PF01797 Transposase IS200 like ISU59_10710 PF02796 Helix-turn-helix domain of resolvase ISU59_10710 PF00665 Integrase core domain ISU59_10715 PF01695 IstB-like ATP binding protein ISU59_10725 PF17969 L,D-transpeptidase C-terminal domain ISU59_10725 PF01476 LysM domain ISU59_10725 PF03734 L,D-transpeptidase catalytic domain ISU59_10730 PF02657 Fe-S metabolism associated domain ISU59_10735 PF00266 Aminotransferase class-V ISU59_10740 PF01458 Uncharacterized protein family (UPF0051) ISU59_10745 PF00005 ABC transporter ISU59_10750 PF01458 Uncharacterized protein family (UPF0051) ISU59_10755 PF01521 Iron-sulphur cluster biosynthesis ISU59_10760 PF03061 Thioesterase superfamily ISU59_10765 PF13183 4Fe-4S dicluster domain ISU59_10765 PF01565 FAD binding domain ISU59_10765 PF02913 FAD linked oxidases, C-terminal domain ISU59_10770 PF01594 AI-2E family transporter ISU59_10780 PF00391 PEP-utilising enzyme, mobile domain ISU59_10780 PF02896 PEP-utilising enzyme, TIM barrel domain ISU59_10780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU59_10785 PF03618 Kinase/pyrophosphorylase ISU59_10790 PF00793 DAHP synthetase I family ISU59_10800 PF03099 Biotin/lipoate A/B protein ligase family ISU59_10800 PF10437 Bacterial lipoate protein ligase C-terminus ISU59_10805 PF00877 NlpC/P60 family ISU59_10820 PF00892 EamA-like transporter family ISU59_10825 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU59_10835 PF00551 Formyl transferase ISU59_10835 PF02911 Formyl transferase, C-terminal domain ISU59_10835 PF01370 NAD dependent epimerase/dehydratase family ISU59_10840 PF00535 Glycosyl transferase family 2 ISU59_10845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU59_10850 PF00005 ABC transporter ISU59_10855 PF00255 Glutathione peroxidase ISU59_10860 PF01032 FecCD transport family ISU59_10870 PF00216 Bacterial DNA-binding protein ISU59_10875 PF03484 tRNA synthetase B5 domain ISU59_10875 PF03483 B3/4 domain ISU59_10875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU59_10875 PF01588 Putative tRNA binding domain ISU59_10875 PF03147 Ferredoxin-fold anticodon binding domain ISU59_10880 PF01409 tRNA synthetases class II core domain (F) ISU59_10880 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU59_10890 PF00453 Ribosomal protein L20 ISU59_10895 PF01632 Ribosomal protein L35 ISU59_10900 PF00707 Translation initiation factor IF-3, C-terminal domain ISU59_10900 PF05198 Translation initiation factor IF-3, N-terminal domain ISU59_10905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU59_10905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU59_10905 PF02824 TGS domain ISU59_10905 PF03129 Anticodon binding domain ISU59_10910 PF13619 KTSC domain ISU59_10920 PF01914 MarC family integral membrane protein ISU59_10925 PF01464 Transglycosylase SLT domain ISU59_10930 PF01297 Zinc-uptake complex component A periplasmic ISU59_10935 PF00005 ABC transporter ISU59_10940 PF00950 ABC 3 transport family ISU59_10945 PF00950 ABC 3 transport family ISU59_10955 PF03881 Fructosamine kinase ISU59_10960 PF14002 YniB-like protein ISU59_10965 PF13419 Haloacid dehalogenase-like hydrolase ISU59_10970 PF00872 Transposase, Mutator family ISU59_10975 PF07883 Cupin domain ISU59_10980 PF04962 KduI/IolB family ISU59_10990 PF06917 Periplasmic pectate lyase ISU59_10995 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_11000 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_11005 PF03459 TOBE domain ISU59_11005 PF17912 MalK OB fold domain ISU59_11005 PF00005 ABC transporter ISU59_11010 PF01547 Bacterial extracellular solute-binding protein ISU59_11015 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU59_11020 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU59_11025 PF00375 Sodium:dicarboxylate symporter family ISU59_11030 PF01510 N-acetylmuramoyl-L-alanine amidase ISU59_11035 PF01614 Bacterial transcriptional regulator ISU59_11035 PF09339 IclR helix-turn-helix domain ISU59_11040 PF14583 Oligogalacturonate lyase ISU59_11045 PF07690 Major Facilitator Superfamily ISU59_11050 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_11050 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_11065 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_11065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_11070 PF00419 Fimbrial protein ISU59_11075 PF01435 Peptidase family M48 ISU59_11080 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU59_11080 PF17804 Tail specific protease N-terminal domain ISU59_11080 PF03572 Peptidase family S41 ISU59_11080 PF00595 PDZ domain ISU59_11085 PF04352 ProQ/FINO family ISU59_11085 PF17516 ProQ C-terminal domain ISU59_11090 PF13185 GAF domain ISU59_11095 PF04403 Paraquat-inducible protein A ISU59_11100 PF02470 MlaD protein ISU59_11120 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_11120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_11135 PF07351 Protein of unknown function (DUF1480) ISU59_11145 PF00665 Integrase core domain ISU59_11145 PF02796 Helix-turn-helix domain of resolvase ISU59_11150 PF01695 IstB-like ATP binding protein ISU59_11175 PF00842 Alanine racemase, C-terminal domain ISU59_11175 PF01168 Alanine racemase, N-terminal domain ISU59_11185 PF03895 YadA-like membrane anchor domain ISU59_11185 PF05658 Head domain of trimeric autotransporter adhesin ISU59_11185 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU59_11185 PF13018 Extended Signal Peptide of Type V secretion system ISU59_11190 PF01510 N-acetylmuramoyl-L-alanine amidase ISU59_11195 PF04344 Chemotaxis phosphatase, CheZ ISU59_11200 PF00072 Response regulator receiver domain ISU59_11210 PF03705 CheR methyltransferase, all-alpha domain ISU59_11210 PF01739 CheR methyltransferase, SAM binding domain ISU59_11215 PF02203 Tar ligand binding domain homologue ISU59_11215 PF00672 HAMP domain ISU59_11215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU59_11220 PF02203 Tar ligand binding domain homologue ISU59_11220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU59_11220 PF00672 HAMP domain ISU59_11235 PF12951 Passenger-associated-transport-repeat ISU59_11240 PF08348 YheO-like PAS domain ISU59_11240 PF13309 HTH domain ISU59_11250 PF01042 Endoribonuclease L-PSP ISU59_11255 PF07690 Major Facilitator Superfamily ISU59_11260 PF01584 CheW-like domain ISU59_11265 PF09078 CheY binding ISU59_11265 PF01627 Hpt domain ISU59_11265 PF01584 CheW-like domain ISU59_11265 PF02895 Signal transducing histidine kinase, homodimeric domain ISU59_11265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_11270 PF00691 OmpA family ISU59_11270 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU59_11275 PF01618 MotA/TolQ/ExbB proton channel family ISU59_11280 PF05280 Flagellar transcriptional activator (FlhC) ISU59_11290 PF00689 Cation transporting ATPase, C-terminus ISU59_11290 PF00690 Cation transporter/ATPase, N-terminus ISU59_11295 PF02308 MgtC family ISU59_11305 PF10781 Dextransucrase DSRB ISU59_11310 PF00313 'Cold-shock' DNA-binding domain ISU59_11315 PF16353 Domain of unknown function(DUF4981) ISU59_11315 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU59_11315 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU59_11315 PF02929 Beta galactosidase small chain ISU59_11315 PF00703 Glycosyl hydrolases family 2 ISU59_11320 PF14765 Polyketide synthase dehydratase ISU59_11320 PF00550 Phosphopantetheine attachment site ISU59_11320 PF08659 KR domain ISU59_11320 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU59_11320 PF08240 Alcohol dehydrogenase GroES-like domain ISU59_11320 PF00107 Zinc-binding dehydrogenase ISU59_11320 PF16197 Ketoacyl-synthetase C-terminal extension ISU59_11320 PF00698 Acyl transferase domain ISU59_11320 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU59_11325 PF10777 Inner membrane protein YlaC ISU59_11330 PF13404 AsnC-type helix-turn-helix domain ISU59_11330 PF01037 Lrp/AsnC ligand binding domain ISU59_11340 PF14001 YdfZ protein ISU59_11345 PF00328 Histidine phosphatase superfamily (branch 2) ISU59_11355 PF01638 HxlR-like helix-turn-helix ISU59_11360 PF05368 NmrA-like family ISU59_11365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU59_11365 PF08447 PAS fold ISU59_11375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU59_11375 PF00356 Bacterial regulatory proteins, lacI family ISU59_11380 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU59_11385 PF00849 RNA pseudouridylate synthase ISU59_11390 PF00293 NUDIX domain ISU59_11400 PF04356 Protein of unknown function (DUF489) ISU59_11405 PF00206 Lyase ISU59_11405 PF08328 Adenylosuccinate lyase C-terminal ISU59_11415 PF00072 Response regulator receiver domain ISU59_11415 PF00486 Transcriptional regulatory protein, C terminal ISU59_11420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_11420 PF08918 PhoQ Sensor ISU59_11425 PF08007 Cupin superfamily protein ISU59_11430 PF01546 Peptidase family M20/M25/M40 ISU59_11430 PF07687 Peptidase dimerisation domain ISU59_11435 PF02146 Sir2 family ISU59_11440 PF00480 ROK family ISU59_11445 PF00480 ROK family ISU59_11450 PF12704 MacB-like periplasmic core domain ISU59_11450 PF02687 FtsX-like permease family ISU59_11455 PF00005 ABC transporter ISU59_11460 PF02687 FtsX-like permease family ISU59_11460 PF12704 MacB-like periplasmic core domain ISU59_11465 PF17757 UvrB interaction domain ISU59_11465 PF02559 CarD-like/TRCF domain ISU59_11465 PF00270 DEAD/DEAH box helicase ISU59_11465 PF00271 Helicase conserved C-terminal domain ISU59_11465 PF03461 TRCF domain ISU59_11470 PF05433 Glycine zipper 2TM domain ISU59_11475 PF00872 Transposase, Mutator family ISU59_11490 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_11495 PF05728 Uncharacterised protein family (UPF0227) ISU59_11500 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU59_11505 PF01636 Phosphotransferase enzyme family ISU59_11510 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU59_11510 PF13036 Peptidoglycan-synthase activator LpoB ISU59_11515 PF07233 Protein of unknown function (DUF1425) ISU59_11520 PF01230 HIT domain ISU59_11525 PF08501 Shikimate dehydrogenase substrate binding domain ISU59_11535 PF00665 Integrase core domain ISU59_11535 PF02796 Helix-turn-helix domain of resolvase ISU59_11540 PF01695 IstB-like ATP binding protein ISU59_11545 PF01797 Transposase IS200 like ISU59_11550 PF02378 Phosphotransferase system, EIIC ISU59_11550 PF00367 phosphotransferase system, EIIB ISU59_11555 PF01026 TatD related DNase ISU59_11560 PF09115 DNA polymerase III, delta subunit, C terminal ISU59_11565 PF02223 Thymidylate kinase ISU59_11570 PF02618 YceG-like family ISU59_11575 PF01063 Amino-transferase class IV ISU59_11580 PF01797 Transposase IS200 like ISU59_11585 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU59_11585 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU59_11590 PF00550 Phosphopantetheine attachment site ISU59_11600 PF00698 Acyl transferase domain ISU59_11605 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU59_11605 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU59_11610 PF02504 Fatty acid synthesis protein ISU59_11615 PF01783 Ribosomal L32p protein family ISU59_11620 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU59_11625 PF02545 Maf-like protein ISU59_11630 PF01479 S4 domain ISU59_11630 PF00849 RNA pseudouridylate synthase ISU59_11635 PF00575 S1 RNA binding domain ISU59_11635 PF10150 Ribonuclease E/G family ISU59_11635 PF12111 Polyribonucleotide phosphorylase C terminal ISU59_11640 PF00872 Transposase, Mutator family ISU59_11645 PF13991 BssS protein family ISU59_11650 PF06183 DinI-like family ISU59_11655 PF01979 Amidohydrolase family ISU59_11660 PF03992 Antibiotic biosynthesis monooxygenase ISU59_11670 PF00872 Transposase, Mutator family ISU59_11675 PF01266 FAD dependent oxidoreductase ISU59_11680 PF00196 Bacterial regulatory proteins, luxR family ISU59_11690 PF01594 AI-2E family transporter ISU59_11710 PF00765 Autoinducer synthase ISU59_11715 PF00196 Bacterial regulatory proteins, luxR family ISU59_11715 PF03472 Autoinducer binding domain ISU59_11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_11720 PF03466 LysR substrate binding domain ISU59_11730 PF00083 Sugar (and other) transporter ISU59_11740 PF00248 Aldo/keto reductase family ISU59_11745 PF09618 CRISPR-associated protein (Cas_Csy4) ISU59_11750 PF09615 CRISPR-associated protein (Cas_Csy3) ISU59_11755 PF09614 CRISPR-associated protein (Cas_Csy2) ISU59_11760 PF09611 CRISPR-associated protein (Cas_Csy1) ISU59_11770 PF01867 CRISPR associated protein Cas1 ISU59_11775 PF00924 Mechanosensitive ion channel ISU59_11795 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU59_11800 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_11805 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_11815 PF00356 Bacterial regulatory proteins, lacI family ISU59_11820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU59_11820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU59_11820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU59_11820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU59_11825 PF00005 ABC transporter ISU59_11825 PF17912 MalK OB fold domain ISU59_11835 PF13332 Hemagglutinin repeat ISU59_11835 PF05860 haemagglutination activity domain ISU59_11835 PF15526 Novel toxin 21 ISU59_11835 PF05594 Haemagluttinin repeat ISU59_11835 PF04829 Pre-toxin domain with VENN motif ISU59_11880 PF17287 POTRA domain ISU59_11880 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU59_11880 PF08479 POTRA domain, ShlB-type ISU59_11885 PF00175 Oxidoreductase NAD-binding domain ISU59_11885 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU59_11885 PF00970 Oxidoreductase FAD-binding domain ISU59_11895 PF02028 BCCT, betaine/carnitine/choline family transporter ISU59_11905 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU59_11910 PF03466 LysR substrate binding domain ISU59_11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_11920 PF02653 Branched-chain amino acid transport system / permease component ISU59_11925 PF00005 ABC transporter ISU59_11930 PF13407 Periplasmic binding protein domain ISU59_11935 PF00107 Zinc-binding dehydrogenase ISU59_11935 PF08240 Alcohol dehydrogenase GroES-like domain ISU59_11955 PF13505 Outer membrane protein beta-barrel domain ISU59_11960 PF00892 EamA-like transporter family ISU59_11970 PF13649 Methyltransferase domain ISU59_11975 PF00210 Ferritin-like domain ISU59_11985 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_11990 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_11995 PF00005 ABC transporter ISU59_12000 PF08447 PAS fold ISU59_12000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU59_12000 PF13426 PAS domain ISU59_12005 PF00665 Integrase core domain ISU59_12005 PF02796 Helix-turn-helix domain of resolvase ISU59_12010 PF01695 IstB-like ATP binding protein ISU59_12020 PF05971 RNA methyltransferase ISU59_12025 PF07338 Protein of unknown function (DUF1471) ISU59_12030 PF02885 Glycosyl transferase family, helical bundle domain ISU59_12035 PF13193 AMP-binding enzyme C-terminal domain ISU59_12035 PF00501 AMP-binding enzyme ISU59_12040 PF13378 Enolase C-terminal domain-like ISU59_12045 PF00378 Enoyl-CoA hydratase/isomerase ISU59_12050 PF12697 Alpha/beta hydrolase family ISU59_12055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU59_12055 PF16582 Middle domain of thiamine pyrophosphate ISU59_12055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU59_12060 PF00425 chorismate binding enzyme ISU59_12070 PF05957 Bacterial protein of unknown function (DUF883) ISU59_12075 PF00920 Dehydratase family ISU59_12080 PF03928 Haem-degrading ISU59_12085 PF07690 Major Facilitator Superfamily ISU59_12090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU59_12090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU59_12095 PF00356 Bacterial regulatory proteins, lacI family ISU59_12100 PF02638 Glycosyl hydrolase-like 10 ISU59_12115 PF01202 Shikimate kinase ISU59_12120 PF00106 short chain dehydrogenase ISU59_12135 PF00361 Proton-conducting membrane transporter ISU59_12140 PF00361 Proton-conducting membrane transporter ISU59_12145 PF00361 Proton-conducting membrane transporter ISU59_12145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU59_12150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU59_12155 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU59_12160 PF12838 4Fe-4S dicluster domain ISU59_12165 PF00146 NADH dehydrogenase ISU59_12170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU59_12170 PF01568 Molydopterin dinucleotide binding domain ISU59_12170 PF00384 Molybdopterin oxidoreductase ISU59_12170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU59_12175 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU59_12175 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU59_12175 PF10531 SLBB domain ISU59_12185 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU59_12185 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU59_12190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU59_12195 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU59_12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_12200 PF03466 LysR substrate binding domain ISU59_12205 PF00155 Aminotransferase class I and II ISU59_12215 PF03600 Citrate transporter ISU59_12215 PF02080 TrkA-C domain ISU59_12220 PF13419 Haloacid dehalogenase-like hydrolase ISU59_12225 PF03887 YfbU domain ISU59_12230 PF04217 Protein of unknown function, DUF412 ISU59_12235 PF00871 Acetokinase family ISU59_12240 PF07085 DRTGG domain ISU59_12240 PF01515 Phosphate acetyl/butaryl transferase ISU59_12245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU59_12245 PF00356 Bacterial regulatory proteins, lacI family ISU59_12250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU59_12260 PF03611 PTS system sugar-specific permease component ISU59_12265 PF00293 NUDIX domain ISU59_12270 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU59_12280 PF01370 NAD dependent epimerase/dehydratase family ISU59_12280 PF08338 Domain of unknown function (DUF1731) ISU59_12285 PF00005 ABC transporter ISU59_12290 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_12295 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_12300 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_12305 PF02441 Flavoprotein ISU59_12310 PF00156 Phosphoribosyl transferase domain ISU59_12315 PF02674 Colicin V production protein ISU59_12320 PF05036 Sporulation related domain ISU59_12325 PF08245 Mur ligase middle domain ISU59_12325 PF02875 Mur ligase family, glutamate ligase domain ISU59_12330 PF01039 Carboxyl transferase domain ISU59_12330 PF17848 Acetyl-coA carboxylase zinc finger domain ISU59_12335 PF09335 SNARE associated Golgi protein ISU59_12340 PF01416 tRNA pseudouridine synthase ISU59_12345 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU59_12345 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU59_12350 PF11890 Domain of unknown function (DUF3410) ISU59_12350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU59_12350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU59_12360 PF00892 EamA-like transporter family ISU59_12370 PF00419 Fimbrial protein ISU59_12380 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU59_12380 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU59_12385 PF01266 FAD dependent oxidoreductase ISU59_12385 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU59_12390 PF08891 YfcL protein ISU59_12395 PF04315 Elongation factor P hydroxylase ISU59_12400 PF01925 Sulfite exporter TauE/SafE ISU59_12405 PF03411 Penicillin-insensitive murein endopeptidase ISU59_12410 PF01264 Chorismate synthase ISU59_12415 PF05175 Methyltransferase small domain ISU59_12420 PF01713 Smr domain ISU59_12425 PF00300 Histidine phosphatase superfamily (branch 1) ISU59_12430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU59_12430 PF00378 Enoyl-CoA hydratase/isomerase ISU59_12430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU59_12435 PF00108 Thiolase, N-terminal domain ISU59_12435 PF02803 Thiolase, C-terminal domain ISU59_12440 PF04175 Protein of unknown function (DUF406) ISU59_12445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU59_12450 PF04333 MlaA lipoprotein ISU59_12455 PF03918 Cytochrome C biogenesis protein ISU59_12460 PF03918 Cytochrome C biogenesis protein ISU59_12465 PF08534 Redoxin ISU59_12470 PF01578 Cytochrome C assembly protein ISU59_12470 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU59_12475 PF03100 CcmE ISU59_12480 PF04995 Heme exporter protein D (CcmD) ISU59_12485 PF01578 Cytochrome C assembly protein ISU59_12490 PF03379 CcmB protein ISU59_12495 PF00005 ABC transporter ISU59_12510 PF04011 LemA family ISU59_12520 PF03831 PhnA domain ISU59_12520 PF08274 PhnA Zinc-Ribbon ISU59_12535 PF07024 ImpE protein ISU59_12550 PF06715 Gp5 C-terminal repeat (3 copies) ISU59_12550 PF04717 Type VI secretion system, phage-baseplate injector ISU59_12555 PF06744 Type VI secretion protein IcmF C-terminal ISU59_12555 PF14331 ImcF-related N-terminal domain ISU59_12555 PF06761 Intracellular multiplication and human macrophage-killing ISU59_12565 PF01695 IstB-like ATP binding protein ISU59_12570 PF02796 Helix-turn-helix domain of resolvase ISU59_12570 PF00665 Integrase core domain ISU59_12580 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU59_12595 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU59_12600 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU59_12610 PF00577 Outer membrane usher protein ISU59_12610 PF13954 PapC N-terminal domain ISU59_12610 PF13953 PapC C-terminal domain ISU59_12615 PF00872 Transposase, Mutator family ISU59_12620 PF00577 Outer membrane usher protein ISU59_12620 PF13953 PapC C-terminal domain ISU59_12620 PF13954 PapC N-terminal domain ISU59_12625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_12625 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_12630 PF16970 Type-1 fimbrial protein, A ISU59_12635 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_12635 PF07724 AAA domain (Cdc48 subfamily) ISU59_12635 PF17871 AAA lid domain ISU59_12635 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_12640 PF05947 Type VI secretion system, TssF ISU59_12685 PF13406 Transglycosylase SLT domain ISU59_12695 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_12700 PF00005 ABC transporter ISU59_12710 PF05638 Type VI secretion system effector, Hcp ISU59_12720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU59_12720 PF00384 Molybdopterin oxidoreductase ISU59_12720 PF01568 Molydopterin dinucleotide binding domain ISU59_12725 PF12800 4Fe-4S binding domain ISU59_12725 PF13247 4Fe-4S dicluster domain ISU59_12730 PF04976 DMSO reductase anchor subunit (DmsC) ISU59_12735 PF02613 Nitrate reductase delta subunit ISU59_12745 PF05643 Putative bacterial lipoprotein (DUF799) ISU59_12755 PF03783 Curli production assembly/transport component CsgG ISU59_12765 PF01292 Prokaryotic cytochrome b561 ISU59_12770 PF00155 Aminotransferase class I and II ISU59_12775 PF07350 Protein of unknown function (DUF1479) ISU59_12780 PF02685 Glucokinase ISU59_12790 PF03466 LysR substrate binding domain ISU59_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_12795 PF00248 Aldo/keto reductase family ISU59_12805 PF01566 Natural resistance-associated macrophage protein ISU59_12810 PF07662 Na+ dependent nucleoside transporter C-terminus ISU59_12810 PF01773 Na+ dependent nucleoside transporter N-terminus ISU59_12810 PF07670 Nucleoside recognition ISU59_12845 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU59_12850 PF01797 Transposase IS200 like ISU59_12875 PF12843 Putative quorum-sensing-regulated virulence factor ISU59_12880 PF03120 NAD-dependent DNA ligase OB-fold domain ISU59_12880 PF01653 NAD-dependent DNA ligase adenylation domain ISU59_12880 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU59_12880 PF12826 Helix-hairpin-helix motif ISU59_12880 PF00533 BRCA1 C Terminus (BRCT) domain ISU59_12885 PF04354 ZipA, C-terminal FtsZ-binding domain ISU59_12895 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_12900 PF00381 PTS HPr component phosphorylation site ISU59_12905 PF02896 PEP-utilising enzyme, TIM barrel domain ISU59_12905 PF00391 PEP-utilising enzyme, mobile domain ISU59_12905 PF05524 PEP-utilising enzyme, N-terminal ISU59_12910 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU59_12915 PF01797 Transposase IS200 like ISU59_12920 PF00672 HAMP domain ISU59_12920 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU59_12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_12920 PF00512 His Kinase A (phospho-acceptor) domain ISU59_12925 PF00072 Response regulator receiver domain ISU59_12925 PF00486 Transcriptional regulatory protein, C terminal ISU59_12930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_12935 PF00005 ABC transporter ISU59_12935 PF02687 FtsX-like permease family ISU59_12935 PF12704 MacB-like periplasmic core domain ISU59_12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_12940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU59_12945 PF00474 Sodium:solute symporter family ISU59_12955 PF00557 Metallopeptidase family M24 ISU59_12965 PF00155 Aminotransferase class I and II ISU59_12975 PF00512 His Kinase A (phospho-acceptor) domain ISU59_12975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_12975 PF00672 HAMP domain ISU59_12980 PF00072 Response regulator receiver domain ISU59_12980 PF00486 Transcriptional regulatory protein, C terminal ISU59_13000 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_13005 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_13015 PF07690 Major Facilitator Superfamily ISU59_13020 PF01380 SIS domain ISU59_13020 PF01418 Helix-turn-helix domain, rpiR family ISU59_13025 PF04074 YhcH/YjgK/YiaL ISU59_13030 PF00480 ROK family ISU59_13035 PF12468 Type III secretion system leucine rich repeat protein ISU59_13040 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU59_13045 PF00701 Dihydrodipicolinate synthetase family ISU59_13050 PF04261 Dyp-type peroxidase family ISU59_13055 PF06572 Protein of unknown function (DUF1131) ISU59_13060 PF04076 Bacterial OB fold (BOF) protein ISU59_13065 PF13018 Extended Signal Peptide of Type V secretion system ISU59_13065 PF03797 Autotransporter beta-domain ISU59_13065 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU59_13065 PF03212 Pertactin ISU59_13075 PF00583 Acetyltransferase (GNAT) family ISU59_13080 PF01218 Coproporphyrinogen III oxidase ISU59_13085 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU59_13090 PF00390 Malic enzyme, N-terminal domain ISU59_13090 PF01515 Phosphate acetyl/butaryl transferase ISU59_13090 PF03949 Malic enzyme, NAD binding domain ISU59_13095 PF00293 NUDIX domain ISU59_13100 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU59_13105 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU59_13110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU59_13110 PF00384 Molybdopterin oxidoreductase ISU59_13110 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU59_13110 PF01568 Molydopterin dinucleotide binding domain ISU59_13115 PF03927 NapD protein ISU59_13120 PF00037 4Fe-4S binding domain ISU59_13120 PF12800 4Fe-4S binding domain ISU59_13120 PF13187 4Fe-4S dicluster domain ISU59_13125 PF00072 Response regulator receiver domain ISU59_13125 PF00196 Bacterial regulatory proteins, luxR family ISU59_13135 PF00873 AcrB/AcrD/AcrF family ISU59_13145 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU59_13150 PF04055 Radical SAM superfamily ISU59_13150 PF13186 Iron-sulfur cluster-binding domain ISU59_13155 PF00884 Sulfatase ISU59_13165 PF08402 TOBE domain ISU59_13165 PF00005 ABC transporter ISU59_13170 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_13185 PF03960 ArsC family ISU59_13190 PF07687 Peptidase dimerisation domain ISU59_13190 PF01546 Peptidase family M20/M25/M40 ISU59_13195 PF02557 D-alanyl-D-alanine carboxypeptidase ISU59_13200 PF13980 Uncharacterised protein family (UPF0370) ISU59_13205 PF08351 Domain of unknown function (DUF1726) ISU59_13205 PF13718 GNAT acetyltransferase 2 ISU59_13205 PF05127 Helicase ISU59_13205 PF17176 tRNA-binding domain ISU59_13210 PF04284 Protein of unknown function (DUF441) ISU59_13215 PF04228 Putative neutral zinc metallopeptidase ISU59_13220 PF01259 SAICAR synthetase ISU59_13225 PF01797 Transposase IS200 like ISU59_13230 PF06804 NlpB/DapX lipoprotein ISU59_13235 PF00701 Dihydrodipicolinate synthetase family ISU59_13240 PF01842 ACT domain ISU59_13245 PF00578 AhpC/TSA family ISU59_13255 PF01594 AI-2E family transporter ISU59_13260 PF01435 Peptidase family M48 ISU59_13260 PF07720 Tetratricopeptide repeat ISU59_13265 PF03960 ArsC family ISU59_13270 PF00308 Bacterial dnaA protein ISU59_13275 PF01797 Transposase IS200 like ISU59_13285 PF00586 AIR synthase related protein, N-terminal domain ISU59_13285 PF02769 AIR synthase related protein, C-terminal domain ISU59_13290 PF00551 Formyl transferase ISU59_13295 PF13302 Acetyltransferase (GNAT) domain ISU59_13305 PF00005 ABC transporter ISU59_13310 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_13315 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_13320 PF02503 Polyphosphate kinase middle domain ISU59_13320 PF13090 Polyphosphate kinase C-terminal domain 2 ISU59_13320 PF17941 Polyphosphate kinase C-terminal domain 1 ISU59_13320 PF13089 Polyphosphate kinase N-terminal domain ISU59_13325 PF02541 Ppx/GppA phosphatase family ISU59_13335 PF01769 Divalent cation transporter ISU59_13335 PF03448 MgtE intracellular N domain ISU59_13335 PF00571 CBS domain ISU59_13345 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_13350 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_13360 PF00202 Aminotransferase class-III ISU59_13365 PF00392 Bacterial regulatory proteins, gntR family ISU59_13365 PF00155 Aminotransferase class I and II ISU59_13370 PF08402 TOBE domain ISU59_13370 PF00005 ABC transporter ISU59_13375 PF13533 Biotin-lipoyl like ISU59_13380 PF00873 AcrB/AcrD/AcrF family ISU59_13385 PF00873 AcrB/AcrD/AcrF family ISU59_13390 PF07690 Major Facilitator Superfamily ISU59_13400 PF00072 Response regulator receiver domain ISU59_13400 PF00486 Transcriptional regulatory protein, C terminal ISU59_13405 PF07411 Domain of unknown function (DUF1508) ISU59_13410 PF01136 Peptidase family U32 ISU59_13410 PF16325 Peptidase family U32 C-terminal domain ISU59_13415 PF00781 Diacylglycerol kinase catalytic domain ISU59_13435 PF08543 Phosphomethylpyrimidine kinase ISU59_13450 PF00872 Transposase, Mutator family ISU59_13480 PF05638 Type VI secretion system effector, Hcp ISU59_13485 PF01797 Transposase IS200 like ISU59_13490 PF00958 GMP synthase C terminal domain ISU59_13490 PF00117 Glutamine amidotransferase class-I ISU59_13490 PF02540 NAD synthase ISU59_13495 PF00478 IMP dehydrogenase / GMP reductase domain ISU59_13495 PF00571 CBS domain ISU59_13500 PF13742 OB-fold nucleic acid binding domain ISU59_13500 PF02601 Exonuclease VII, large subunit ISU59_13505 PF07191 zinc-ribbons ISU59_13515 PF01926 50S ribosome-binding GTPase ISU59_13515 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU59_13520 PF13360 PQQ-like domain ISU59_13525 PF09976 Tetratricopeptide repeat-like domain ISU59_13530 PF03129 Anticodon binding domain ISU59_13530 PF13393 Histidyl-tRNA synthetase ISU59_13535 PF04551 GcpE protein ISU59_13540 PF13464 Domain of unknown function (DUF4115) ISU59_13550 PF04055 Radical SAM superfamily ISU59_13555 PF00334 Nucleoside diphosphate kinase ISU59_13565 PF03212 Pertactin ISU59_13565 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU59_13565 PF03797 Autotransporter beta-domain ISU59_13570 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU59_13570 PF03797 Autotransporter beta-domain ISU59_13570 PF03212 Pertactin ISU59_13585 PF14581 SseB protein C-terminal domain ISU59_13585 PF07179 SseB protein N-terminal domain ISU59_13590 PF00883 Cytosol aminopeptidase family, catalytic domain ISU59_13590 PF12404 Peptidase ISU59_13595 PF04384 Iron-sulphur cluster assembly ISU59_13600 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU59_13605 PF00012 Hsp70 protein ISU59_13610 PF00226 DnaJ domain ISU59_13610 PF07743 HSCB C-terminal oligomerisation domain ISU59_13615 PF01521 Iron-sulphur cluster biosynthesis ISU59_13620 PF01592 NifU-like N terminal domain ISU59_13625 PF00266 Aminotransferase class-V ISU59_13630 PF02082 Transcriptional regulator ISU59_13635 PF00588 SpoU rRNA Methylase family ISU59_13640 PF00459 Inositol monophosphatase family ISU59_13645 PF03824 High-affinity nickel-transport protein ISU59_13650 PF06226 Protein of unknown function (DUF1007) ISU59_13655 PF00874 PRD domain ISU59_13660 PF12832 MFS_1 like family ISU59_13665 PF13505 Outer membrane protein beta-barrel domain ISU59_13670 PF00464 Serine hydroxymethyltransferase ISU59_13675 PF00175 Oxidoreductase NAD-binding domain ISU59_13675 PF00042 Globin ISU59_13675 PF00970 Oxidoreductase FAD-binding domain ISU59_13685 PF01695 IstB-like ATP binding protein ISU59_13690 PF02796 Helix-turn-helix domain of resolvase ISU59_13690 PF00665 Integrase core domain ISU59_13700 PF00543 Nitrogen regulatory protein P-II ISU59_13705 PF02540 NAD synthase ISU59_13705 PF00795 Carbon-nitrogen hydrolase ISU59_13710 PF00072 Response regulator receiver domain ISU59_13710 PF00158 Sigma-54 interaction domain ISU59_13715 PF13942 YfhG lipoprotein ISU59_13720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_13720 PF00512 His Kinase A (phospho-acceptor) domain ISU59_13725 PF01797 Transposase IS200 like ISU59_13750 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU59_13750 PF02769 AIR synthase related protein, C-terminal domain ISU59_13750 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU59_13755 PF01464 Transglycosylase SLT domain ISU59_13755 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_13760 PF14437 MafB19-like deaminase ISU59_13770 PF01380 SIS domain ISU59_13775 PF01418 Helix-turn-helix domain, rpiR family ISU59_13775 PF01380 SIS domain ISU59_13780 PF12838 4Fe-4S dicluster domain ISU59_13785 PF01797 Transposase IS200 like ISU59_13790 PF01648 4'-phosphopantetheinyl transferase superfamily ISU59_13795 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU59_13800 PF11967 Recombination protein O N terminal ISU59_13800 PF02565 Recombination protein O C terminal ISU59_13805 PF01926 50S ribosome-binding GTPase ISU59_13805 PF07650 KH domain ISU59_13810 PF00035 Double-stranded RNA binding motif ISU59_13810 PF14622 Ribonuclease-III-like ISU59_13815 PF10502 Signal peptidase, peptidase S26 ISU59_13820 PF00009 Elongation factor Tu GTP binding domain ISU59_13820 PF06421 GTP-binding protein LepA C-terminus ISU59_13820 PF00679 Elongation factor G C-terminus ISU59_13820 PF03144 Elongation factor Tu domain 2 ISU59_13835 PF03888 MucB/RseB N-terminal domain ISU59_13835 PF17188 MucB/RseB C-terminal domain ISU59_13840 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU59_13840 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU59_13845 PF04542 Sigma-70 region 2 ISU59_13845 PF08281 Sigma-70, region 4 ISU59_13850 PF02910 Fumarate reductase flavoprotein C-term ISU59_13850 PF00890 FAD binding domain ISU59_13855 PF05175 Methyltransferase small domain ISU59_13860 PF00271 Helicase conserved C-terminal domain ISU59_13860 PF00270 DEAD/DEAH box helicase ISU59_13865 PF12796 Ankyrin repeats (3 copies) ISU59_13875 PF01228 Glycine radical ISU59_13880 PF03167 Uracil DNA glycosylase superfamily ISU59_13885 PF01470 Pyroglutamyl peptidase ISU59_13900 PF03746 LamB/YcsF family ISU59_13905 PF02626 Carboxyltransferase domain, subdomain A and B ISU59_13920 PF01784 NIF3 (NGG1p interacting factor 3) ISU59_13925 PF02112 cAMP phosphodiesterases class-II ISU59_13930 PF00875 DNA photolyase ISU59_13930 PF03441 FAD binding domain of DNA photolyase ISU59_13935 PF08349 Protein of unknown function (DUF1722) ISU59_13940 PF10725 Protein of unknown function (DUF2517) ISU59_13955 PF03814 Potassium-transporting ATPase A subunit ISU59_13965 PF02669 K+-transporting ATPase, c chain ISU59_13970 PF13492 GAF domain ISU59_13970 PF13493 Domain of unknown function (DUF4118) ISU59_13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_13970 PF00512 His Kinase A (phospho-acceptor) domain ISU59_13970 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU59_13975 PF00486 Transcriptional regulatory protein, C terminal ISU59_13975 PF00072 Response regulator receiver domain ISU59_13990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU59_13990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU59_13990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU59_13990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU59_13995 PF03925 SeqA protein C-terminal domain ISU59_13995 PF17206 SeqA protein N-terminal domain ISU59_14005 PF04794 YdjC-like protein ISU59_14010 PF07883 Cupin domain ISU59_14010 PF12833 Helix-turn-helix domain ISU59_14015 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU59_14020 PF02378 Phosphotransferase system, EIIC ISU59_14025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU59_14035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU59_14040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU59_14045 PF02254 TrkA-N domain ISU59_14045 PF07885 Ion channel ISU59_14050 PF06411 HdeA/HdeB family ISU59_14055 PF03824 High-affinity nickel-transport protein ISU59_14060 PF03253 Urea transporter ISU59_14070 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU59_14075 PF01730 UreF ISU59_14080 PF05194 UreE urease accessory protein, C-terminal domain ISU59_14080 PF02814 UreE urease accessory protein, N-terminal domain ISU59_14085 PF01979 Amidohydrolase family ISU59_14085 PF00449 Urease alpha-subunit, N-terminal domain ISU59_14090 PF00699 Urease beta subunit ISU59_14095 PF00547 Urease, gamma subunit ISU59_14100 PF00005 ABC transporter ISU59_14105 PF00005 ABC transporter ISU59_14110 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_14110 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU59_14115 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_14120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_14125 PF00313 'Cold-shock' DNA-binding domain ISU59_14135 PF06711 Protein of unknown function (DUF1198) ISU59_14140 PF09400 Protein of unknown function (DUF2002) ISU59_14145 PF06392 Acid shock protein repeat ISU59_14155 PF07972 NrdI Flavodoxin like ISU59_14160 PF08343 Ribonucleotide reductase N-terminal ISU59_14160 PF02867 Ribonucleotide reductase, barrel domain ISU59_14160 PF00317 Ribonucleotide reductase, all-alpha domain ISU59_14165 PF00268 Ribonucleotide reductase, small chain ISU59_14170 PF00005 ABC transporter ISU59_14170 PF00571 CBS domain ISU59_14175 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_14180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU59_14195 PF02796 Helix-turn-helix domain of resolvase ISU59_14195 PF00665 Integrase core domain ISU59_14215 PF00589 Phage integrase family ISU59_14215 PF13356 Arm DNA-binding domain ISU59_14225 PF12697 Alpha/beta hydrolase family ISU59_14230 PF01402 Ribbon-helix-helix protein, copG family ISU59_14235 PF00258 Flavodoxin ISU59_14240 PF01475 Ferric uptake regulator family ISU59_14250 PF03573 outer membrane porin, OprD family ISU59_14255 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU59_14255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU59_14260 PF01797 Transposase IS200 like ISU59_14265 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU59_14265 PF02378 Phosphotransferase system, EIIC ISU59_14265 PF00367 phosphotransferase system, EIIB ISU59_14270 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU59_14275 PF01979 Amidohydrolase family ISU59_14280 PF00480 ROK family ISU59_14280 PF01047 MarR family ISU59_14285 PF13344 Haloacid dehalogenase-like hydrolase ISU59_14290 PF00733 Asparagine synthase ISU59_14290 PF13537 Glutamine amidotransferase domain ISU59_14325 PF01494 FAD binding domain ISU59_14330 PF04055 Radical SAM superfamily ISU59_14330 PF01938 TRAM domain ISU59_14330 PF00919 Uncharacterized protein family UPF0004 ISU59_14335 PF02562 PhoH-like protein ISU59_14340 PF02130 Uncharacterized protein family UPF0054 ISU59_14345 PF00571 CBS domain ISU59_14345 PF03471 Transporter associated domain ISU59_14350 PF00795 Carbon-nitrogen hydrolase ISU59_14355 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_14360 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_14365 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_14370 PF00005 ABC transporter ISU59_14375 PF07295 Zinc-ribbon containing domain ISU59_14380 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU59_14380 PF00133 tRNA synthetases class I (I, L, M and V) ISU59_14380 PF08264 Anticodon-binding domain of tRNA ISU59_14385 PF04390 Lipopolysaccharide-assembly ISU59_14390 PF06144 DNA polymerase III, delta subunit ISU59_14390 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU59_14395 PF01467 Cytidylyltransferase-like ISU59_14405 PF02590 Predicted SPOUT methyltransferase ISU59_14410 PF03717 Penicillin-binding Protein dimerisation domain ISU59_14410 PF00905 Penicillin binding protein transpeptidase domain ISU59_14415 PF01098 Cell cycle protein ISU59_14420 PF05036 Sporulation related domain ISU59_14420 PF03330 Lytic transglycolase ISU59_14425 PF00768 D-alanyl-D-alanine carboxypeptidase ISU59_14425 PF07943 Penicillin-binding protein 5, C-terminal domain ISU59_14430 PF04359 Protein of unknown function (DUF493) ISU59_14435 PF03099 Biotin/lipoate A/B protein ligase family ISU59_14440 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU59_14440 PF04055 Radical SAM superfamily ISU59_14445 PF02416 mttA/Hcf106 family ISU59_14450 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU59_14455 PF00313 'Cold-shock' DNA-binding domain ISU59_14460 PF00313 'Cold-shock' DNA-binding domain ISU59_14465 PF00196 Bacterial regulatory proteins, luxR family ISU59_14490 PF00664 ABC transporter transmembrane region ISU59_14490 PF00005 ABC transporter ISU59_14500 PF04962 KduI/IolB family ISU59_14505 PF01261 Xylose isomerase-like TIM barrel ISU59_14510 PF00294 pfkB family carbohydrate kinase ISU59_14515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU59_14515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU59_14520 PF02653 Branched-chain amino acid transport system / permease component ISU59_14525 PF00005 ABC transporter ISU59_14530 PF13407 Periplasmic binding protein domain ISU59_14540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU59_14540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU59_14540 PF00205 Thiamine pyrophosphate enzyme, central domain ISU59_14545 PF00171 Aldehyde dehydrogenase family ISU59_14560 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU59_14560 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU59_14560 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU59_14560 PF07703 Alpha-2-macroglobulin bait region domain ISU59_14560 PF17962 Bacterial macroglobulin domain 6 ISU59_14560 PF01835 MG2 domain ISU59_14560 PF00207 Alpha-2-macroglobulin family ISU59_14565 PF01797 Transposase IS200 like ISU59_14570 PF06832 Penicillin-Binding Protein C-terminus Family ISU59_14570 PF00912 Transglycosylase ISU59_14570 PF00905 Penicillin binding protein transpeptidase domain ISU59_14575 PF13693 Winged helix-turn-helix DNA-binding ISU59_14595 PF05638 Type VI secretion system effector, Hcp ISU59_14610 PF03797 Autotransporter beta-domain ISU59_14610 PF03212 Pertactin ISU59_14610 PF13018 Extended Signal Peptide of Type V secretion system ISU59_14610 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU59_14630 PF00872 Transposase, Mutator family ISU59_14645 PF14310 Fibronectin type III-like domain ISU59_14645 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU59_14645 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU59_14655 PF00248 Aldo/keto reductase family ISU59_14660 PF00248 Aldo/keto reductase family ISU59_14665 PF03466 LysR substrate binding domain ISU59_14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_14670 PF00665 Integrase core domain ISU59_14670 PF02796 Helix-turn-helix domain of resolvase ISU59_14675 PF01695 IstB-like ATP binding protein ISU59_14690 PF00782 Dual specificity phosphatase, catalytic domain ISU59_14695 PF12147 Putative methyltransferase ISU59_14695 PF12146 Serine aminopeptidase, S33 ISU59_14700 PF01553 Acyltransferase ISU59_14710 PF01066 CDP-alcohol phosphatidyltransferase ISU59_14720 PF00589 Phage integrase family ISU59_14750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU59_14750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU59_14760 PF01797 Transposase IS200 like ISU59_14765 PF09190 DALR domain ISU59_14765 PF01406 tRNA synthetases class I (C) catalytic domain ISU59_14770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU59_14775 PF00149 Calcineurin-like phosphoesterase ISU59_14780 PF00731 AIR carboxylase ISU59_14785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU59_14785 PF02222 ATP-grasp domain ISU59_14795 PF00005 ABC transporter ISU59_14800 PF13472 GDSL-like Lipase/Acylhydrolase family ISU59_14805 PF00106 short chain dehydrogenase ISU59_14810 PF00085 Thioredoxin ISU59_14815 PF01145 SPFH domain / Band 7 family ISU59_14815 PF16200 C-terminal region of band_7 ISU59_14820 PF01957 NfeD-like C-terminal, partner-binding ISU59_14825 PF13411 MerR HTH family regulatory protein ISU59_14830 PF00403 Heavy-metal-associated domain ISU59_14835 PF01963 TraB family ISU59_14840 PF04073 Aminoacyl-tRNA editing domain ISU59_14855 PF07690 Major Facilitator Superfamily ISU59_14860 PF00999 Sodium/hydrogen exchanger family ISU59_14860 PF02254 TrkA-N domain ISU59_14865 PF00294 pfkB family carbohydrate kinase ISU59_14870 PF02706 Chain length determinant protein ISU59_14875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU59_14875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU59_14875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU59_14875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU59_14880 PF00535 Glycosyl transferase family 2 ISU59_14885 PF01050 Mannose-6-phosphate isomerase ISU59_14885 PF00483 Nucleotidyl transferase ISU59_14890 PF01370 NAD dependent epimerase/dehydratase family ISU59_14900 PF13439 Glycosyltransferase Family 4 ISU59_14900 PF00534 Glycosyl transferases group 1 ISU59_14930 PF01370 NAD dependent epimerase/dehydratase family ISU59_14935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU59_14945 PF00483 Nucleotidyl transferase ISU59_14950 PF00175 Oxidoreductase NAD-binding domain ISU59_14950 PF00970 Oxidoreductase FAD-binding domain ISU59_14950 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU59_14955 PF00762 Ferrochelatase ISU59_14960 PF05191 Adenylate kinase, active site lid ISU59_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_14965 PF00183 Hsp90 protein ISU59_14970 PF13662 Toprim domain ISU59_14970 PF02132 RecR protein ISU59_14975 PF02575 YbaB/EbfC DNA-binding family ISU59_14980 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU59_14980 PF12169 DNA polymerase III subunits gamma and tau domain III ISU59_14980 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU59_14990 PF04304 Protein of unknown function (DUF454) ISU59_15000 PF10689 Protein of unknown function (DUF2496) ISU59_15005 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU59_15005 PF12795 Mechanosensitive ion channel porin domain ISU59_15005 PF00924 Mechanosensitive ion channel ISU59_15010 PF02635 DsrE/DsrF-like family ISU59_15015 PF00440 Bacterial regulatory proteins, tetR family ISU59_15015 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU59_15020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_15020 PF00529 HlyD membrane-fusion protein of T1SS ISU59_15030 PF01197 Ribosomal protein L31 ISU59_15035 PF00444 Ribosomal protein L36 ISU59_15045 PF10757 Biofilm formation regulator YbaJ ISU59_15050 PF05321 Haemolysin expression modulating protein ISU59_15060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU59_15065 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU59_15080 PF01695 IstB-like ATP binding protein ISU59_15085 PF02796 Helix-turn-helix domain of resolvase ISU59_15085 PF00665 Integrase core domain ISU59_15095 PF00543 Nitrogen regulatory protein P-II ISU59_15100 PF00005 ABC transporter ISU59_15100 PF00664 ABC transporter transmembrane region ISU59_15105 PF00664 ABC transporter transmembrane region ISU59_15105 PF00005 ABC transporter ISU59_15110 PF13404 AsnC-type helix-turn-helix domain ISU59_15110 PF01037 Lrp/AsnC ligand binding domain ISU59_15115 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_15125 PF12793 Sugar transport-related sRNA regulator N-term ISU59_15125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU59_15130 PF06508 Queuosine biosynthesis protein QueC ISU59_15145 PF13145 PPIC-type PPIASE domain ISU59_15150 PF00216 Bacterial DNA-binding protein ISU59_15155 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU59_15155 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU59_15155 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_15160 PF06689 ClpX C4-type zinc finger ISU59_15160 PF07724 AAA domain (Cdc48 subfamily) ISU59_15160 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_15165 PF00574 Clp protease ISU59_15170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU59_15170 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU59_15170 PF05697 Bacterial trigger factor protein (TF) ISU59_15175 PF01722 BolA-like protein ISU59_15180 PF03923 Uncharacterized lipoprotein ISU59_15180 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU59_15185 PF07690 Major Facilitator Superfamily ISU59_15190 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU59_15195 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU59_15195 PF06481 COX Aromatic Rich Motif ISU59_15200 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU59_15205 PF00510 Cytochrome c oxidase subunit III ISU59_15210 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU59_15215 PF01040 UbiA prenyltransferase family ISU59_15220 PF07690 Major Facilitator Superfamily ISU59_15225 PF04461 Protein of unknown function (DUF520) ISU59_15230 PF02558 Ketopantoate reductase PanE/ApbA ISU59_15230 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU59_15235 PF01965 DJ-1/PfpI family ISU59_15240 PF02926 THUMP domain ISU59_15240 PF02568 Thiamine biosynthesis protein (ThiI) ISU59_15245 PF02609 Exonuclease VII small subunit ISU59_15250 PF00348 Polyprenyl synthetase ISU59_15255 PF02780 Transketolase, C-terminal domain ISU59_15255 PF02779 Transketolase, pyrimidine binding domain ISU59_15255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU59_15260 PF01797 Transposase IS200 like ISU59_15265 PF04608 Phosphatidylglycerophosphatase A ISU59_15270 PF02769 AIR synthase related protein, C-terminal domain ISU59_15270 PF00586 AIR synthase related protein, N-terminal domain ISU59_15275 PF01029 NusB family ISU59_15280 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU59_15285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU59_15285 PF01872 RibD C-terminal domain ISU59_15290 PF03477 ATP cone domain ISU59_15305 PF01797 Transposase IS200 like ISU59_15310 PF01797 Transposase IS200 like ISU59_15315 PF07549 SecD/SecF GG Motif ISU59_15315 PF02355 Protein export membrane protein ISU59_15320 PF02355 Protein export membrane protein ISU59_15320 PF13721 SecD export protein N-terminal TM region ISU59_15320 PF07549 SecD/SecF GG Motif ISU59_15325 PF02699 Preprotein translocase subunit ISU59_15330 PF01702 Queuine tRNA-ribosyltransferase ISU59_15335 PF02547 Queuosine biosynthesis protein ISU59_15340 PF04336 Acyl carrier protein phosphodiesterase ISU59_15345 PF00578 AhpC/TSA family ISU59_15345 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU59_15365 PF02903 Alpha amylase, N-terminal ig-like domain ISU59_15365 PF00128 Alpha amylase, catalytic domain ISU59_15370 PF00324 Amino acid permease ISU59_15375 PF05525 Branched-chain amino acid transport protein ISU59_15380 PF12849 PBP superfamily domain ISU59_15385 PF00989 PAS fold ISU59_15385 PF11808 Phosphate regulon sensor protein PhoR ISU59_15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_15385 PF00512 His Kinase A (phospho-acceptor) domain ISU59_15390 PF00072 Response regulator receiver domain ISU59_15390 PF00486 Transcriptional regulatory protein, C terminal ISU59_15395 PF12320 Type 5 capsule protein repressor C-terminal domain ISU59_15395 PF00149 Calcineurin-like phosphoesterase ISU59_15400 PF13476 AAA domain ISU59_15405 PF00480 ROK family ISU59_15410 PF04381 Putative exonuclease, RdgC ISU59_15415 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU59_15420 PF01202 Shikimate kinase ISU59_15430 PF08241 Methyltransferase domain ISU59_15440 PF07238 PilZ domain ISU59_15440 PF07317 Flagellar regulator YcgR ISU59_15445 PF00171 Aldehyde dehydrogenase family ISU59_15450 PF01472 PUA domain ISU59_15450 PF00696 Amino acid kinase family ISU59_15455 PF07417 Sigma factor-binding transcriptional regulator Crl ISU59_15460 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU59_15465 PF00156 Phosphoribosyl transferase domain ISU59_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_15480 PF03466 LysR substrate binding domain ISU59_15485 PF07687 Peptidase dimerisation domain ISU59_15485 PF01546 Peptidase family M20/M25/M40 ISU59_15490 PF11798 IMS family HHH motif ISU59_15490 PF00817 impB/mucB/samB family ISU59_15490 PF11799 impB/mucB/samB family C-terminal domain ISU59_15495 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU59_15505 PF02424 ApbE family ISU59_15510 PF00970 Oxidoreductase FAD-binding domain ISU59_15510 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU59_15510 PF00175 Oxidoreductase NAD-binding domain ISU59_15515 PF02508 Rnf-Nqr subunit, membrane protein ISU59_15520 PF02508 Rnf-Nqr subunit, membrane protein ISU59_15525 PF04205 FMN-binding domain ISU59_15530 PF03116 NQR2, RnfD, RnfE family ISU59_15535 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU59_15535 PF11973 NQRA C-terminal domain ISU59_15540 PF03734 L,D-transpeptidase catalytic domain ISU59_15545 PF13230 Glutamine amidotransferases class-II ISU59_15550 PF13580 SIS domain ISU59_15555 PF09317 Domain of unknown function (DUF1974) ISU59_15555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU59_15555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU59_15565 PF18071 HMW1C N-terminal ISU59_15565 PF18254 HMW1 domain 2 ISU59_15570 PF05860 haemagglutination activity domain ISU59_15575 PF08479 POTRA domain, ShlB-type ISU59_15575 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU59_15585 PF07687 Peptidase dimerisation domain ISU59_15585 PF01546 Peptidase family M20/M25/M40 ISU59_15590 PF00266 Aminotransferase class-V ISU59_15595 PF02796 Helix-turn-helix domain of resolvase ISU59_15595 PF00665 Integrase core domain ISU59_15600 PF01695 IstB-like ATP binding protein ISU59_15605 PF00266 Aminotransferase class-V ISU59_15610 PF00005 ABC transporter ISU59_15615 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_15620 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_15625 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_15640 PF01425 Amidase ISU59_15650 PF07690 Major Facilitator Superfamily ISU59_15655 PF03591 AzlC protein ISU59_15660 PF05437 Branched-chain amino acid transport protein (AzlD) ISU59_15665 PF01047 MarR family ISU59_15670 PF00529 HlyD membrane-fusion protein of T1SS ISU59_15670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_15675 PF07690 Major Facilitator Superfamily ISU59_15680 PF00588 SpoU rRNA Methylase family ISU59_15680 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU59_15685 PF00085 Thioredoxin ISU59_15690 PF03942 DTW domain ISU59_15695 PF13380 CoA binding domain ISU59_15695 PF00583 Acetyltransferase (GNAT) family ISU59_15695 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU59_15700 PF13091 PLD-like domain ISU59_15705 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU59_15735 PF17871 AAA lid domain ISU59_15735 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_15735 PF07724 AAA domain (Cdc48 subfamily) ISU59_15735 PF02861 Clp amino terminal domain, pathogenicity island component ISU59_15735 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_15740 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU59_15745 PF01479 S4 domain ISU59_15745 PF00849 RNA pseudouridylate synthase ISU59_15750 PF13525 Outer membrane lipoprotein ISU59_15755 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU59_15760 PF01797 Transposase IS200 like ISU59_15770 PF00665 Integrase core domain ISU59_15770 PF02796 Helix-turn-helix domain of resolvase ISU59_15775 PF01695 IstB-like ATP binding protein ISU59_15785 PF01817 Chorismate mutase type II ISU59_15785 PF02153 Prephenate dehydrogenase ISU59_15790 PF00793 DAHP synthetase I family ISU59_15795 PF04397 LytTr DNA-binding domain ISU59_15795 PF00072 Response regulator receiver domain ISU59_15805 PF04338 Protein of unknown function, DUF481 ISU59_15810 PF01797 Transposase IS200 like ISU59_15815 PF01245 Ribosomal protein L19 ISU59_15820 PF01746 tRNA (Guanine-1)-methyltransferase ISU59_15825 PF01782 RimM N-terminal domain ISU59_15825 PF05239 PRC-barrel domain ISU59_15830 PF00886 Ribosomal protein S16 ISU59_15835 PF00448 SRP54-type protein, GTPase domain ISU59_15835 PF02881 SRP54-type protein, helical bundle domain ISU59_15835 PF02978 Signal peptide binding domain ISU59_15840 PF01578 Cytochrome C assembly protein ISU59_15845 PF00571 CBS domain ISU59_15845 PF03471 Transporter associated domain ISU59_15845 PF01595 Cyclin M transmembrane N-terminal domain ISU59_15850 PF01797 Transposase IS200 like ISU59_15855 PF02664 S-Ribosylhomocysteinase (LuxS) ISU59_15860 PF04262 Glutamate-cysteine ligase ISU59_15865 PF09335 SNARE associated Golgi protein ISU59_15870 PF13419 Haloacid dehalogenase-like hydrolase ISU59_15900 PF02599 Global regulator protein family ISU59_15905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU59_15905 PF02272 DHHA1 domain ISU59_15905 PF01411 tRNA synthetases class II (A) ISU59_15910 PF02631 RecX family ISU59_15915 PF00154 recA bacterial DNA recombination protein ISU59_15920 PF02464 Competence-damaged protein ISU59_15925 PF07690 Major Facilitator Superfamily ISU59_15940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_15940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_15945 PF02780 Transketolase, C-terminal domain ISU59_15945 PF02779 Transketolase, pyrimidine binding domain ISU59_15950 PF00456 Transketolase, thiamine diphosphate binding domain ISU59_15955 PF02653 Branched-chain amino acid transport system / permease component ISU59_15960 PF00005 ABC transporter ISU59_15970 PF13407 Periplasmic binding protein domain ISU59_15975 PF00141 Peroxidase ISU59_15980 PF07361 Cytochrome b562 ISU59_15985 PF01292 Prokaryotic cytochrome b561 ISU59_15990 PF02613 Nitrate reductase delta subunit ISU59_15995 PF04976 DMSO reductase anchor subunit (DmsC) ISU59_16000 PF12800 4Fe-4S binding domain ISU59_16000 PF13247 4Fe-4S dicluster domain ISU59_16005 PF01568 Molydopterin dinucleotide binding domain ISU59_16005 PF00384 Molybdopterin oxidoreductase ISU59_16005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU59_16010 PF00596 Class II Aldolase and Adducin N-terminal domain ISU59_16015 PF08220 DeoR-like helix-turn-helix domain ISU59_16015 PF00455 DeoR C terminal sensor domain ISU59_16025 PF01797 Transposase IS200 like ISU59_16030 PF00005 ABC transporter ISU59_16035 PF02653 Branched-chain amino acid transport system / permease component ISU59_16040 PF02653 Branched-chain amino acid transport system / permease component ISU59_16045 PF01261 Xylose isomerase-like TIM barrel ISU59_16050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_16050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_16055 PF05683 Fumarase C-terminus ISU59_16055 PF05681 Fumarate hydratase (Fumerase) ISU59_16065 PF00557 Metallopeptidase family M24 ISU59_16075 PF00593 TonB dependent receptor ISU59_16075 PF07715 TonB-dependent Receptor Plug Domain ISU59_16085 PF14376 Haem-binding domain ISU59_16085 PF03150 Di-haem cytochrome c peroxidase ISU59_16085 PF00034 Cytochrome c ISU59_16090 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_16105 PF01022 Bacterial regulatory protein, arsR family ISU59_16110 PF02040 Arsenical pump membrane protein ISU59_16115 PF04198 Putative sugar-binding domain ISU59_16115 PF13936 Helix-turn-helix domain ISU59_16120 PF02734 DAK2 domain ISU59_16125 PF02733 Dak1 domain ISU59_16135 PF08240 Alcohol dehydrogenase GroES-like domain ISU59_16135 PF00107 Zinc-binding dehydrogenase ISU59_16140 PF02502 Ribose/Galactose Isomerase ISU59_16145 PF05190 MutS family domain IV ISU59_16145 PF01624 MutS domain I ISU59_16145 PF05188 MutS domain II ISU59_16145 PF05192 MutS domain III ISU59_16145 PF00488 MutS domain V ISU59_16150 PF04545 Sigma-70, region 4 ISU59_16150 PF04539 Sigma-70 region 3 ISU59_16150 PF04542 Sigma-70 region 2 ISU59_16150 PF00140 Sigma-70 factor, region 1.2 ISU59_16155 PF01476 LysM domain ISU59_16155 PF01551 Peptidase family M23 ISU59_16165 PF01975 Survival protein SurE ISU59_16170 PF01142 tRNA pseudouridine synthase D (TruD) ISU59_16175 PF02542 YgbB family ISU59_16180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU59_16185 PF04977 Septum formation initiator ISU59_16190 PF12084 Protein of unknown function (DUF3561) ISU59_16200 PF00009 Elongation factor Tu GTP binding domain ISU59_16205 PF01507 Phosphoadenosine phosphosulfate reductase family ISU59_16210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU59_16210 PF14824 Sirohaem biosynthesis protein central ISU59_16210 PF10414 Sirohaem synthase dimerisation region ISU59_16240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU59_16240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU59_16245 PF00258 Flavodoxin ISU59_16245 PF00667 FAD binding domain ISU59_16245 PF00175 Oxidoreductase NAD-binding domain ISU59_16250 PF01242 6-pyruvoyl tetrahydropterin synthase ISU59_16255 PF04055 Radical SAM superfamily ISU59_16260 PF00080 Copper/zinc superoxide dismutase (SODC) ISU59_16265 PF03952 Enolase, N-terminal domain ISU59_16265 PF00113 Enolase, C-terminal TIM barrel domain ISU59_16270 PF00117 Glutamine amidotransferase class-I ISU59_16270 PF06418 CTP synthase N-terminus ISU59_16275 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU59_16280 PF13291 ACT domain ISU59_16280 PF04607 Region found in RelA / SpoT proteins ISU59_16280 PF02824 TGS domain ISU59_16285 PF01938 TRAM domain ISU59_16285 PF05958 tRNA (Uracil-5-)-methyltransferase ISU59_16295 PF00672 HAMP domain ISU59_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_16295 PF00512 His Kinase A (phospho-acceptor) domain ISU59_16295 PF01627 Hpt domain ISU59_16295 PF00072 Response regulator receiver domain ISU59_16295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU59_16300 PF00595 PDZ domain ISU59_16305 PF13286 Phosphohydrolase-associated domain ISU59_16305 PF01966 HD domain ISU59_16310 PF01048 Phosphorylase superfamily ISU59_16315 PF01497 Periplasmic binding protein ISU59_16320 PF03458 UPF0126 domain ISU59_16325 PF01521 Iron-sulphur cluster biosynthesis ISU59_16330 PF00654 Voltage gated chloride channel ISU59_16335 PF00202 Aminotransferase class-III ISU59_16340 PF01032 FecCD transport family ISU59_16345 PF01497 Periplasmic binding protein ISU59_16350 PF00005 ABC transporter ISU59_16355 PF00912 Transglycosylase ISU59_16355 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU59_16355 PF00905 Penicillin binding protein transpeptidase domain ISU59_16355 PF14814 Bifunctional transglycosylase second domain ISU59_16360 PF04408 Helicase associated domain (HA2) ISU59_16360 PF00270 DEAD/DEAH box helicase ISU59_16360 PF00271 Helicase conserved C-terminal domain ISU59_16360 PF08482 ATP-dependent helicase C-terminal ISU59_16365 PF02834 LigT like Phosphoesterase ISU59_16370 PF03749 Sugar fermentation stimulation protein RE domain ISU59_16370 PF17746 SfsA N-terminal OB domain ISU59_16375 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU59_16380 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU59_16385 PF12626 Polymerase A arginine-rich C-terminus ISU59_16385 PF01743 Poly A polymerase head domain ISU59_16385 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU59_16390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU59_16395 PF02548 Ketopantoate hydroxymethyltransferase ISU59_16400 PF02569 Pantoate-beta-alanine ligase ISU59_16405 PF02261 Aspartate decarboxylase ISU59_16415 PF01061 ABC-2 type transporter ISU59_16420 PF00005 ABC transporter ISU59_16425 PF00484 Carbonic anhydrase ISU59_16430 PF00156 Phosphoribosyl transferase domain ISU59_16435 PF07732 Multicopper oxidase ISU59_16435 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU59_16435 PF07731 Multicopper oxidase ISU59_16435 PF00394 Multicopper oxidase ISU59_16440 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU59_16445 PF17284 Spermidine synthase tetramerisation domain ISU59_16450 PF02675 S-adenosylmethionine decarboxylase ISU59_16455 PF00892 EamA-like transporter family ISU59_16460 PF06062 Uncharacterised protein family (UPF0231) ISU59_16465 PF11791 Aconitate B N-terminal domain ISU59_16465 PF00330 Aconitase family (aconitate hydratase) ISU59_16465 PF06434 Aconitate hydratase 2 N-terminus ISU59_16470 PF01797 Transposase IS200 like ISU59_16475 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_16475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU59_16480 PF02817 e3 binding domain ISU59_16480 PF00364 Biotin-requiring enzyme ISU59_16480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU59_16485 PF00456 Transketolase, thiamine diphosphate binding domain ISU59_16485 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU59_16490 PF07729 FCD domain ISU59_16490 PF00392 Bacterial regulatory proteins, gntR family ISU59_16495 PF00324 Amino acid permease ISU59_16500 PF17113 Regulatory signalling modulator protein AmpE ISU59_16505 PF01510 N-acetylmuramoyl-L-alanine amidase ISU59_16510 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU59_16510 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU59_16515 PF07963 Prokaryotic N-terminal methylation motif ISU59_16520 PF00437 Type II/IV secretion system protein ISU59_16520 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU59_16525 PF00482 Type II secretion system (T2SS), protein F ISU59_16530 PF00478 IMP dehydrogenase / GMP reductase domain ISU59_16535 PF01121 Dephospho-CoA kinase ISU59_16540 PF07072 Cell division protein ISU59_16545 PF03884 DNA gyrase inhibitor YacG ISU59_16550 PF01797 Transposase IS200 like ISU59_16555 PF02796 Helix-turn-helix domain of resolvase ISU59_16555 PF00665 Integrase core domain ISU59_16560 PF01695 IstB-like ATP binding protein ISU59_16565 PF08676 MutL C terminal dimerisation domain ISU59_16565 PF01119 DNA mismatch repair protein, C-terminal domain ISU59_16575 PF13356 Arm DNA-binding domain ISU59_16575 PF00589 Phage integrase family ISU59_16585 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU59_16590 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU59_16595 PF00883 Cytosol aminopeptidase family, catalytic domain ISU59_16595 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU59_16600 PF04364 DNA polymerase III chi subunit, HolC ISU59_16605 PF10458 Valyl tRNA synthetase tRNA binding arm ISU59_16605 PF00133 tRNA synthetases class I (I, L, M and V) ISU59_16605 PF08264 Anticodon-binding domain of tRNA ISU59_16610 PF00583 Acetyltransferase (GNAT) family ISU59_16615 PF06877 Regulator of ribonuclease activity B ISU59_16620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU59_16620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU59_16625 PF04074 YhcH/YjgK/YiaL ISU59_16635 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_16640 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU59_16640 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_16645 PF00005 ABC transporter ISU59_16645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_16650 PF00005 ABC transporter ISU59_16650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU59_16655 PF03477 ATP cone domain ISU59_16655 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU59_16665 PF07702 UTRA domain ISU59_16665 PF00392 Bacterial regulatory proteins, gntR family ISU59_16670 PF06754 Phosphonate metabolism protein PhnG ISU59_16675 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU59_16680 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU59_16685 PF06007 Phosphonate metabolism protein PhnJ ISU59_16690 PF00005 ABC transporter ISU59_16695 PF00005 ABC transporter ISU59_16700 PF07969 Amidohydrolase family ISU59_16715 PF13460 NAD(P)H-binding ISU59_16730 PF00005 ABC transporter ISU59_16730 PF17912 MalK OB fold domain ISU59_16730 PF03459 TOBE domain ISU59_16735 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_16740 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_16745 PF13416 Bacterial extracellular solute-binding protein ISU59_16760 PF01541 GIY-YIG catalytic domain ISU59_16765 PF13508 Acetyltransferase (GNAT) domain ISU59_16770 PF02036 SCP-2 sterol transfer family ISU59_16775 PF01136 Peptidase family U32 ISU59_16780 PF01136 Peptidase family U32 ISU59_16785 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU59_16785 PF02321 Outer membrane efflux protein ISU59_16790 PF00873 AcrB/AcrD/AcrF family ISU59_16795 PF00529 HlyD membrane-fusion protein of T1SS ISU59_16795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_16800 PF00296 Luciferase-like monooxygenase ISU59_16810 PF01381 Helix-turn-helix ISU59_16820 PF12343 Cold shock protein DEAD box A ISU59_16820 PF00271 Helicase conserved C-terminal domain ISU59_16820 PF03880 DbpA RNA binding domain ISU59_16820 PF00270 DEAD/DEAH box helicase ISU59_16830 PF13181 Tetratricopeptide repeat ISU59_16830 PF07719 Tetratricopeptide repeat ISU59_16835 PF00013 KH domain ISU59_16835 PF00575 S1 RNA binding domain ISU59_16835 PF03725 3' exoribonuclease family, domain 2 ISU59_16835 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU59_16835 PF01138 3' exoribonuclease family, domain 1 ISU59_16845 PF00312 Ribosomal protein S15 ISU59_16850 PF09157 Pseudouridine synthase II TruB, C-terminal ISU59_16850 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU59_16850 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU59_16855 PF02033 Ribosome-binding factor A ISU59_16860 PF00009 Elongation factor Tu GTP binding domain ISU59_16860 PF11987 Translation-initiation factor 2 ISU59_16860 PF08364 Bacterial translation initiation factor IF-2 associated region ISU59_16860 PF04760 Translation initiation factor IF-2, N-terminal region ISU59_16860 PF03144 Elongation factor Tu domain 2 ISU59_16865 PF00575 S1 RNA binding domain ISU59_16865 PF08529 NusA N-terminal domain ISU59_16865 PF13184 NusA-like KH domain ISU59_16870 PF17384 RimP C-terminal SH3 domain ISU59_16870 PF02576 RimP N-terminal domain ISU59_16885 PF03840 Preprotein translocase SecG subunit ISU59_16890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU59_16890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU59_16890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU59_16890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU59_16895 PF00809 Pterin binding enzyme ISU59_16900 PF17862 AAA+ lid domain ISU59_16900 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_16900 PF06480 FtsH Extracellular ISU59_16900 PF01434 Peptidase family M41 ISU59_16905 PF01728 FtsJ-like methyltransferase ISU59_16910 PF01985 CRS1 / YhbY (CRM) domain ISU59_16915 PF03449 Transcription elongation factor, N-terminal ISU59_16915 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU59_16920 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU59_16925 PF00072 Response regulator receiver domain ISU59_16925 PF00486 Transcriptional regulatory protein, C terminal ISU59_16930 PF00512 His Kinase A (phospho-acceptor) domain ISU59_16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_16930 PF00672 HAMP domain ISU59_16935 PF01018 GTP1/OBG ISU59_16935 PF01926 50S ribosome-binding GTPase ISU59_16940 PF00892 EamA-like transporter family ISU59_16945 PF01016 Ribosomal L27 protein ISU59_16950 PF00829 Ribosomal prokaryotic L21 protein ISU59_16955 PF00348 Polyprenyl synthetase ISU59_16965 PF13693 Winged helix-turn-helix DNA-binding ISU59_16970 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU59_16970 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU59_16975 PF01316 Arginine repressor, DNA binding domain ISU59_16975 PF02863 Arginine repressor, C-terminal domain ISU59_16985 PF01225 Mur ligase family, catalytic domain ISU59_16985 PF02875 Mur ligase family, glutamate ligase domain ISU59_16985 PF08245 Mur ligase middle domain ISU59_16990 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU59_16995 PF00719 Inorganic pyrophosphatase ISU59_17000 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU59_17005 PF04357 TamB, inner membrane protein subunit of TAM complex ISU59_17010 PF07244 Surface antigen variable number repeat ISU59_17010 PF01103 Surface antigen ISU59_17010 PF17243 POTRA domain TamA domain 1 ISU59_17015 PF01625 Peptide methionine sulfoxide reductase ISU59_17020 PF01595 Cyclin M transmembrane N-terminal domain ISU59_17020 PF03471 Transporter associated domain ISU59_17020 PF00571 CBS domain ISU59_17025 PF06526 Protein of unknown function (DUF1107) ISU59_17030 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU59_17035 PF00459 Inositol monophosphatase family ISU59_17040 PF02872 5'-nucleotidase, C-terminal domain ISU59_17040 PF00149 Calcineurin-like phosphoesterase ISU59_17045 PF04405 Domain of Unknown function (DUF542) ISU59_17045 PF01814 Hemerythrin HHE cation binding domain ISU59_17050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU59_17050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU59_17055 PF04225 Opacity-associated protein A LysM-like domain ISU59_17055 PF08525 Opacity-associated protein A N-terminal motif ISU59_17065 PF01797 Transposase IS200 like ISU59_17070 PF03948 Ribosomal protein L9, C-terminal domain ISU59_17070 PF01281 Ribosomal protein L9, N-terminal domain ISU59_17075 PF01084 Ribosomal protein S18 ISU59_17080 PF00436 Single-strand binding protein family ISU59_17085 PF01250 Ribosomal protein S6 ISU59_17090 PF00326 Prolyl oligopeptidase family ISU59_17095 PF00665 Integrase core domain ISU59_17095 PF02796 Helix-turn-helix domain of resolvase ISU59_17100 PF01695 IstB-like ATP binding protein ISU59_17110 PF07338 Protein of unknown function (DUF1471) ISU59_17115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU59_17115 PF18158 Adaptive response protein AidB N-terminal domain ISU59_17115 PF02770 Acyl-CoA dehydrogenase, middle domain ISU59_17120 PF00588 SpoU rRNA Methylase family ISU59_17120 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU59_17125 PF00773 RNB domain ISU59_17125 PF08206 Ribonuclease B OB domain ISU59_17125 PF00575 S1 RNA binding domain ISU59_17125 PF17876 Cold shock domain ISU59_17125 PF08461 Ribonuclease R winged-helix domain ISU59_17130 PF02082 Transcriptional regulator ISU59_17135 PF00709 Adenylosuccinate synthetase ISU59_17140 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU59_17145 PF01145 SPFH domain / Band 7 family ISU59_17150 PF12221 Bacterial membrane protein N terminal ISU59_17150 PF01145 SPFH domain / Band 7 family ISU59_17155 PF16360 GTP-binding GTPase Middle Region ISU59_17155 PF01926 50S ribosome-binding GTPase ISU59_17155 PF13167 GTP-binding GTPase N-terminal ISU59_17160 PF17209 Hfq protein ISU59_17175 PF01520 N-acetylmuramoyl-L-alanine amidase ISU59_17180 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU59_17185 PF01256 Carbohydrate kinase ISU59_17185 PF03853 YjeF-related protein N-terminus ISU59_17190 PF08331 Domain of unknown function (DUF1730) ISU59_17205 PF00929 Exonuclease ISU59_17210 PF03193 RsgA GTPase ISU59_17215 PF02666 Phosphatidylserine decarboxylase ISU59_17220 PF12795 Mechanosensitive ion channel porin domain ISU59_17220 PF00924 Mechanosensitive ion channel ISU59_17220 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU59_17225 PF00152 tRNA synthetases class II (D, K and N) ISU59_17235 PF02910 Fumarate reductase flavoprotein C-term ISU59_17235 PF00890 FAD binding domain ISU59_17240 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU59_17240 PF13183 4Fe-4S dicluster domain ISU59_17245 PF02300 Fumarate reductase subunit C ISU59_17250 PF02313 Fumarate reductase subunit D ISU59_17255 PF00893 Small Multidrug Resistance protein ISU59_17260 PF01132 Elongation factor P (EF-P) OB domain ISU59_17260 PF08207 Elongation factor P (EF-P) KOW-like domain ISU59_17260 PF09285 Elongation factor P, C-terminal ISU59_17265 PF04055 Radical SAM superfamily ISU59_17270 PF13698 Domain of unknown function (DUF4156) ISU59_17275 PF00118 TCP-1/cpn60 chaperonin family ISU59_17280 PF00166 Chaperonin 10 Kd subunit ISU59_17285 PF04186 FxsA cytoplasmic membrane protein ISU59_17290 PF00206 Lyase ISU59_17290 PF10415 Fumarase C C-terminus ISU59_17295 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU59_17300 PF03091 CutA1 divalent ion tolerance protein ISU59_17305 PF02683 Cytochrome C biogenesis protein transmembrane region ISU59_17305 PF11412 Disulphide bond corrector protein DsbC ISU59_17310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU59_17310 PF01568 Molydopterin dinucleotide binding domain ISU59_17310 PF00384 Molybdopterin oxidoreductase ISU59_17315 PF13247 4Fe-4S dicluster domain ISU59_17315 PF12800 4Fe-4S binding domain ISU59_17320 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_17320 PF13247 4Fe-4S dicluster domain ISU59_17320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU59_17350 PF06379 L-rhamnose-proton symport protein (RhaT) ISU59_17355 PF12833 Helix-turn-helix domain ISU59_17355 PF02311 AraC-like ligand binding domain ISU59_17360 PF12833 Helix-turn-helix domain ISU59_17360 PF02311 AraC-like ligand binding domain ISU59_17370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_17370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_17375 PF06134 L-rhamnose isomerase (RhaA) ISU59_17380 PF00596 Class II Aldolase and Adducin N-terminal domain ISU59_17385 PF00465 Iron-containing alcohol dehydrogenase ISU59_17390 PF05336 L-rhamnose mutarotase ISU59_17395 PF00436 Single-strand binding protein family ISU59_17400 PF17755 UvrA DNA-binding domain ISU59_17400 PF00005 ABC transporter ISU59_17400 PF17760 UvrA interaction domain ISU59_17405 PF04237 YjbR ISU59_17410 PF00155 Aminotransferase class I and II ISU59_17415 PF01168 Alanine racemase, N-terminal domain ISU59_17415 PF00842 Alanine racemase, C-terminal domain ISU59_17420 PF00772 DnaB-like helicase N terminal domain ISU59_17420 PF03796 DnaB-like helicase C terminal domain ISU59_17425 PF00107 Zinc-binding dehydrogenase ISU59_17425 PF08240 Alcohol dehydrogenase GroES-like domain ISU59_17430 PF09583 Phage shock protein G (Phageshock_PspG) ISU59_17435 PF01207 Dihydrouridine synthase (Dus) ISU59_17440 PF01475 Ferric uptake regulator family ISU59_17445 PF00717 Peptidase S24-like ISU59_17445 PF01726 LexA DNA binding domain ISU59_17450 PF01219 Prokaryotic diacylglycerol kinase ISU59_17455 PF01553 Acyltransferase ISU59_17460 PF01040 UbiA prenyltransferase family ISU59_17465 PF04345 Chorismate lyase ISU59_17470 PF12951 Passenger-associated-transport-repeat ISU59_17475 PF01565 FAD binding domain ISU59_17475 PF08031 Berberine and berberine like ISU59_17490 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_17495 PF13953 PapC C-terminal domain ISU59_17495 PF13954 PapC N-terminal domain ISU59_17495 PF00577 Outer membrane usher protein ISU59_17505 PF02342 TerD domain ISU59_17510 PF02342 TerD domain ISU59_17515 PF03741 Integral membrane protein TerC family ISU59_17520 PF05099 Tellurite resistance protein TerB ISU59_17525 PF02342 TerD domain ISU59_17530 PF02342 TerD domain ISU59_17550 PF15608 PELOTA RNA binding domain ISU59_17550 PF11202 Phosphoribosyl transferase (PRTase) ISU59_17570 PF04055 Radical SAM superfamily ISU59_17575 PF06228 Haem utilisation ChuX/HutX ISU59_17580 PF13460 NAD(P)H-binding ISU59_17590 PF07715 TonB-dependent Receptor Plug Domain ISU59_17590 PF00593 TonB dependent receptor ISU59_17595 PF05171 Haemin-degrading HemS.ChuX domain ISU59_17600 PF01497 Periplasmic binding protein ISU59_17605 PF01032 FecCD transport family ISU59_17610 PF00005 ABC transporter ISU59_17615 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU59_17620 PF03222 Tryptophan/tyrosine permease family ISU59_17625 PF03466 LysR substrate binding domain ISU59_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_17630 PF01206 Sulfurtransferase TusA ISU59_17640 PF01312 FlhB HrpN YscU SpaS Family ISU59_17645 PF01311 Bacterial export proteins, family 1 ISU59_17650 PF01313 Bacterial export proteins, family 3 ISU59_17655 PF00813 FliP family ISU59_17660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU59_17675 PF18269 T3SS EscN ATPase C-terminal domain ISU59_17675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU59_17680 PF00771 FHIPEP family ISU59_17695 PF01514 Secretory protein of YscJ/FliF family ISU59_17735 PF01627 Hpt domain ISU59_17735 PF00512 His Kinase A (phospho-acceptor) domain ISU59_17735 PF00072 Response regulator receiver domain ISU59_17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_17735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU59_17735 PF00672 HAMP domain ISU59_17740 PF00072 Response regulator receiver domain ISU59_17740 PF00196 Bacterial regulatory proteins, luxR family ISU59_17745 PF00375 Sodium:dicarboxylate symporter family ISU59_17750 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU59_17750 PF00501 AMP-binding enzyme ISU59_17750 PF13193 AMP-binding enzyme C-terminal domain ISU59_17755 PF04341 Protein of unknown function, DUF485 ISU59_17760 PF00474 Sodium:solute symporter family ISU59_17770 PF02796 Helix-turn-helix domain of resolvase ISU59_17770 PF00665 Integrase core domain ISU59_17775 PF01695 IstB-like ATP binding protein ISU59_17810 PF02142 MGS-like domain ISU59_17810 PF01808 AICARFT/IMPCHase bienzyme ISU59_17815 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU59_17815 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU59_17815 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU59_17820 PF07356 Protein of unknown function (DUF1481) ISU59_17825 PF00216 Bacterial DNA-binding protein ISU59_17830 PF04222 Protein of unknown function (DUF416) ISU59_17835 PF04493 Endonuclease V ISU59_17840 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU59_17850 PF09297 NADH pyrophosphatase zinc ribbon domain ISU59_17850 PF00293 NUDIX domain ISU59_17855 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU59_17860 PF01964 Radical SAM ThiC family ISU59_17860 PF13667 ThiC-associated domain ISU59_17865 PF02581 Thiamine monophosphate synthase ISU59_17870 PF00899 ThiF family ISU59_17880 PF05690 Thiazole biosynthesis protein ThiG ISU59_17885 PF06968 Biotin and Thiamin Synthesis associated domain ISU59_17885 PF04055 Radical SAM superfamily ISU59_17890 PF01797 Transposase IS200 like ISU59_17895 PF00623 RNA polymerase Rpb1, domain 2 ISU59_17895 PF05000 RNA polymerase Rpb1, domain 4 ISU59_17895 PF04997 RNA polymerase Rpb1, domain 1 ISU59_17895 PF04998 RNA polymerase Rpb1, domain 5 ISU59_17895 PF04983 RNA polymerase Rpb1, domain 3 ISU59_17900 PF04560 RNA polymerase Rpb2, domain 7 ISU59_17900 PF04565 RNA polymerase Rpb2, domain 3 ISU59_17900 PF10385 RNA polymerase beta subunit external 1 domain ISU59_17900 PF04563 RNA polymerase beta subunit ISU59_17900 PF04561 RNA polymerase Rpb2, domain 2 ISU59_17900 PF00562 RNA polymerase Rpb2, domain 6 ISU59_17905 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU59_17905 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU59_17910 PF00466 Ribosomal protein L10 ISU59_17915 PF00687 Ribosomal protein L1p/L10e family ISU59_17920 PF03946 Ribosomal protein L11, N-terminal domain ISU59_17920 PF00298 Ribosomal protein L11, RNA binding domain ISU59_17925 PF00467 KOW motif ISU59_17925 PF02357 Transcription termination factor nusG ISU59_17930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU59_17935 PF03143 Elongation factor Tu C-terminal domain ISU59_17935 PF03144 Elongation factor Tu domain 2 ISU59_17935 PF00009 Elongation factor Tu GTP binding domain ISU59_17960 PF01695 IstB-like ATP binding protein ISU59_17965 PF02796 Helix-turn-helix domain of resolvase ISU59_17965 PF00665 Integrase core domain ISU59_17970 PF13673 Acetyltransferase (GNAT) domain ISU59_17975 PF00485 Phosphoribulokinase / Uridine kinase family ISU59_17980 PF02237 Biotin protein ligase C terminal domain ISU59_17980 PF03099 Biotin/lipoate A/B protein ligase family ISU59_17980 PF08279 HTH domain ISU59_17985 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU59_17985 PF01565 FAD binding domain ISU59_18015 PF12724 Flavodoxin domain ISU59_18020 PF02386 Cation transport protein ISU59_18030 PF01797 Transposase IS200 like ISU59_18035 PF01205 Uncharacterized protein family UPF0029 ISU59_18035 PF09186 Domain of unknown function (DUF1949) ISU59_18040 PF00557 Metallopeptidase family M24 ISU59_18045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU59_18045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU59_18045 PF00378 Enoyl-CoA hydratase/isomerase ISU59_18050 PF00108 Thiolase, N-terminal domain ISU59_18050 PF02803 Thiolase, C-terminal domain ISU59_18055 PF00175 Oxidoreductase NAD-binding domain ISU59_18055 PF00970 Oxidoreductase FAD-binding domain ISU59_18060 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU59_18065 PF02357 Transcription termination factor nusG ISU59_18070 PF00490 Delta-aminolevulinic acid dehydratase ISU59_18075 PF01026 TatD related DNase ISU59_18095 PF00902 Sec-independent protein translocase protein (TatC) ISU59_18105 PF02416 mttA/Hcf106 family ISU59_18110 PF03109 ABC1 family ISU59_18115 PF02036 SCP-2 sterol transfer family ISU59_18120 PF01209 ubiE/COQ5 methyltransferase family ISU59_18125 PF02646 RmuC family ISU59_18130 PF09335 SNARE associated Golgi protein ISU59_18135 PF02554 Carbon starvation protein CstA ISU59_18135 PF13722 5TM C-terminal transporter carbon starvation CstA ISU59_18145 PF01048 Phosphorylase superfamily ISU59_18150 PF01738 Dienelactone hydrolase family ISU59_18155 PF08267 Cobalamin-independent synthase, N-terminal domain ISU59_18155 PF01717 Cobalamin-independent synthase, Catalytic domain ISU59_18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_18160 PF03466 LysR substrate binding domain ISU59_18165 PF00892 EamA-like transporter family ISU59_18170 PF03547 Membrane transport protein ISU59_18175 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU59_18180 PF00005 ABC transporter ISU59_18180 PF17912 MalK OB fold domain ISU59_18185 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_18190 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_18195 PF13416 Bacterial extracellular solute-binding protein ISU59_18235 PF00005 ABC transporter ISU59_18240 PF00005 ABC transporter ISU59_18240 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU59_18245 PF11862 Domain of unknown function (DUF3382) ISU59_18245 PF02653 Branched-chain amino acid transport system / permease component ISU59_18250 PF02653 Branched-chain amino acid transport system / permease component ISU59_18255 PF13458 Periplasmic binding protein ISU59_18260 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU59_18265 PF01797 Transposase IS200 like ISU59_18270 PF04542 Sigma-70 region 2 ISU59_18270 PF04545 Sigma-70, region 4 ISU59_18270 PF00140 Sigma-70 factor, region 1.2 ISU59_18275 PF18075 FtsX extracellular domain ISU59_18275 PF02687 FtsX-like permease family ISU59_18280 PF00005 ABC transporter ISU59_18285 PF00448 SRP54-type protein, GTPase domain ISU59_18285 PF00448 SRP54-type protein, GTPase domain ISU59_18285 PF02881 SRP54-type protein, helical bundle domain ISU59_18285 PF02881 SRP54-type protein, helical bundle domain ISU59_18295 PF06611 Protein of unknown function (DUF1145) ISU59_18310 PF07947 YhhN family ISU59_18315 PF00403 Heavy-metal-associated domain ISU59_18320 PF01206 Sulfurtransferase TusA ISU59_18325 PF02592 Putative vitamin uptake transporter ISU59_18330 PF08786 DcrB ISU59_18335 PF02754 Cysteine-rich domain ISU59_18335 PF13183 4Fe-4S dicluster domain ISU59_18340 PF00890 FAD binding domain ISU59_18345 PF01266 FAD dependent oxidoreductase ISU59_18345 PF04324 BFD-like [2Fe-2S] binding domain ISU59_18350 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU59_18365 PF12146 Serine aminopeptidase, S33 ISU59_18370 PF01810 LysE type translocator ISU59_18375 PF01810 LysE type translocator ISU59_18380 PF16124 RecQ zinc-binding ISU59_18380 PF00570 HRDC domain ISU59_18380 PF09382 RQC domain ISU59_18380 PF00271 Helicase conserved C-terminal domain ISU59_18380 PF00270 DEAD/DEAH box helicase ISU59_18385 PF02253 Phospholipase A1 ISU59_18390 PF03061 Thioesterase superfamily ISU59_18395 PF00892 EamA-like transporter family ISU59_18400 PF01544 CorA-like Mg2+ transporter protein ISU59_18405 PF09370 Phosphoenolpyruvate hydrolase-like ISU59_18420 PF13361 UvrD-like helicase C-terminal domain ISU59_18420 PF00580 UvrD/REP helicase N-terminal domain ISU59_18425 PF13419 Haloacid dehalogenase-like hydrolase ISU59_18430 PF02899 Phage integrase, N-terminal SAM-like domain ISU59_18430 PF00589 Phage integrase family ISU59_18435 PF04340 Protein of unknown function, DUF484 ISU59_18440 PF01678 Diaminopimelate epimerase ISU59_18445 PF13627 Prokaryotic lipoprotein-attachment site ISU59_18450 PF01491 Frataxin-like domain ISU59_18455 PF01295 Adenylate cyclase, class-I ISU59_18455 PF12633 Adenylate cyclase NT domain ISU59_18465 PF03900 Porphobilinogen deaminase, C-terminal domain ISU59_18465 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU59_18470 PF02602 Uroporphyrinogen-III synthase HemD ISU59_18475 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU59_18480 PF07219 HemY protein N-terminus ISU59_18480 PF07719 Tetratricopeptide repeat ISU59_18485 PF01797 Transposase IS200 like ISU59_18510 PF00324 Amino acid permease ISU59_18515 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU59_18520 PF06899 WzyE protein, O-antigen assembly polymerase ISU59_18525 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU59_18530 PF01943 Polysaccharide biosynthesis protein ISU59_18535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU59_18545 PF00483 Nucleotidyl transferase ISU59_18550 PF16363 GDP-mannose 4,6 dehydratase ISU59_18555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU59_18555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU59_18555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU59_18560 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU59_18565 PF02706 Chain length determinant protein ISU59_18570 PF00953 Glycosyl transferase family 4 ISU59_18575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU59_18575 PF07498 Rho termination factor, N-terminal domain ISU59_18575 PF07497 Rho termination factor, RNA-binding domain ISU59_18580 PF00085 Thioredoxin ISU59_18585 PF00271 Helicase conserved C-terminal domain ISU59_18585 PF00270 DEAD/DEAH box helicase ISU59_18595 PF00580 UvrD/REP helicase N-terminal domain ISU59_18595 PF13361 UvrD-like helicase C-terminal domain ISU59_18615 PF00872 Transposase, Mutator family ISU59_18625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_18625 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_18630 PF13954 PapC N-terminal domain ISU59_18630 PF13953 PapC C-terminal domain ISU59_18630 PF00577 Outer membrane usher protein ISU59_18640 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU59_18640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU59_18645 PF01320 Colicin immunity protein / pyocin immunity protein ISU59_18670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU59_18670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU59_18675 PF03466 LysR substrate binding domain ISU59_18675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_18710 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU59_18710 PF00291 Pyridoxal-phosphate dependent enzyme ISU59_18715 PF00920 Dehydratase family ISU59_18720 PF01063 Amino-transferase class IV ISU59_18730 PF00205 Thiamine pyrophosphate enzyme, central domain ISU59_18730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU59_18730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU59_18735 PF08046 IlvGEDA operon leader peptide ISU59_18740 PF01078 Magnesium chelatase, subunit ChlI ISU59_18740 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU59_18745 PF04219 Protein of unknown function, DUF ISU59_18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_18750 PF03466 LysR substrate binding domain ISU59_18755 PF02653 Branched-chain amino acid transport system / permease component ISU59_18760 PF02653 Branched-chain amino acid transport system / permease component ISU59_18765 PF00005 ABC transporter ISU59_18770 PF13407 Periplasmic binding protein domain ISU59_18805 PF01177 Asp/Glu/Hydantoin racemase ISU59_18810 PF07715 TonB-dependent Receptor Plug Domain ISU59_18810 PF00593 TonB dependent receptor ISU59_18815 PF05958 tRNA (Uracil-5-)-methyltransferase ISU59_18820 PF07226 Protein of unknown function (DUF1422) ISU59_18825 PF00440 Bacterial regulatory proteins, tetR family ISU59_18830 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_18830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU59_18835 PF03466 LysR substrate binding domain ISU59_18835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_18840 PF00462 Glutaredoxin ISU59_18840 PF08534 Redoxin ISU59_18845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU59_18845 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_18850 PF03544 Gram-negative bacterial TonB protein C-terminal ISU59_18855 PF00529 HlyD membrane-fusion protein of T1SS ISU59_18860 PF00664 ABC transporter transmembrane region ISU59_18860 PF00005 ABC transporter ISU59_18870 PF00593 TonB dependent receptor ISU59_18870 PF07715 TonB-dependent Receptor Plug Domain ISU59_18875 PF00206 Lyase ISU59_18875 PF14698 Argininosuccinate lyase C-terminal ISU59_18880 PF00696 Amino acid kinase family ISU59_18885 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU59_18885 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU59_18890 PF07687 Peptidase dimerisation domain ISU59_18890 PF01546 Peptidase family M20/M25/M40 ISU59_18895 PF00311 Phosphoenolpyruvate carboxylase ISU59_18905 PF02219 Methylenetetrahydrofolate reductase ISU59_18910 PF00742 Homoserine dehydrogenase ISU59_18910 PF03447 Homoserine dehydrogenase, NAD binding domain ISU59_18910 PF00696 Amino acid kinase family ISU59_18920 PF01340 Met Apo-repressor, MetJ ISU59_18925 PF05360 yiaA/B two helix domain ISU59_18930 PF01197 Ribosomal protein L31 ISU59_18935 PF17764 3′ DNA-binding domain (3′BD) ISU59_18935 PF00270 DEAD/DEAH box helicase ISU59_18935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU59_18935 PF00271 Helicase conserved C-terminal domain ISU59_18935 PF18074 Primosomal protein N C-terminal domain ISU59_18940 PF00356 Bacterial regulatory proteins, lacI family ISU59_18945 PF05036 Sporulation related domain ISU59_18950 PF00227 Proteasome subunit ISU59_18955 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_18955 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_18955 PF07724 AAA domain (Cdc48 subfamily) ISU59_18960 PF01040 UbiA prenyltransferase family ISU59_18965 PF03737 Aldolase/RraA ISU59_18980 PF00529 HlyD membrane-fusion protein of T1SS ISU59_18980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU59_18985 PF03412 Peptidase C39 family ISU59_18985 PF00664 ABC transporter transmembrane region ISU59_18985 PF00005 ABC transporter ISU59_18990 PF01695 IstB-like ATP binding protein ISU59_18995 PF00665 Integrase core domain ISU59_18995 PF02796 Helix-turn-helix domain of resolvase ISU59_19000 PF01797 Transposase IS200 like ISU59_19005 PF06005 Cell division protein ZapB ISU59_19010 PF00230 Major intrinsic protein ISU59_19015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_19015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_19020 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU59_19025 PF00175 Oxidoreductase NAD-binding domain ISU59_19025 PF00970 Oxidoreductase FAD-binding domain ISU59_19030 PF05656 Protein of unknown function (DUF805) ISU59_19035 PF07305 Protein of unknown function (DUF1454) ISU59_19040 PF00121 Triosephosphate isomerase ISU59_19045 PF03466 LysR substrate binding domain ISU59_19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_19050 PF02585 GlcNAc-PI de-N-acetylase ISU59_19055 PF03737 Aldolase/RraA ISU59_19060 PF00939 Sodium:sulfate symporter transmembrane region ISU59_19075 PF00365 Phosphofructokinase ISU59_19080 PF01545 Cation efflux family ISU59_19080 PF16916 Dimerisation domain of Zinc Transporter ISU59_19085 PF04754 Putative transposase, YhgA-like ISU59_19095 PF07813 LTXXQ motif family protein ISU59_19100 PF00486 Transcriptional regulatory protein, C terminal ISU59_19100 PF00072 Response regulator receiver domain ISU59_19105 PF00512 His Kinase A (phospho-acceptor) domain ISU59_19105 PF00672 HAMP domain ISU59_19105 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU59_19105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_19110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU59_19110 PF12833 Helix-turn-helix domain ISU59_19110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU59_19110 PF02805 Metal binding domain of Ada ISU59_19115 PF00588 SpoU rRNA Methylase family ISU59_19120 PF00132 Bacterial transferase hexapeptide (six repeats) ISU59_19120 PF06426 Serine acetyltransferase, N-terminal ISU59_19125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU59_19125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU59_19130 PF02556 Preprotein translocase subunit SecB ISU59_19135 PF00462 Glutaredoxin ISU59_19140 PF00581 Rhodanese-like domain ISU59_19145 PF01676 Metalloenzyme superfamily ISU59_19145 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU59_19150 PF01551 Peptidase family M23 ISU59_19160 PF00107 Zinc-binding dehydrogenase ISU59_19160 PF08240 Alcohol dehydrogenase GroES-like domain ISU59_19165 PF00155 Aminotransferase class I and II ISU59_19170 PF01370 NAD dependent epimerase/dehydratase family ISU59_19175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU59_19180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU59_19185 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU59_19190 PF00535 Glycosyl transferase family 2 ISU59_19195 PF01467 Cytidylyltransferase-like ISU59_19200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU59_19200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU59_19200 PF06827 Zinc finger found in FPG and IleRS ISU59_19205 PF00471 Ribosomal protein L33 ISU59_19210 PF00830 Ribosomal L28 family ISU59_19215 PF04002 RadC-like JAB domain ISU59_19220 PF04127 DNA / pantothenate metabolism flavoprotein ISU59_19220 PF02441 Flavoprotein ISU59_19225 PF00692 dUTPase ISU59_19230 PF00440 Bacterial regulatory proteins, tetR family ISU59_19235 PF00156 Phosphoribosyl transferase domain ISU59_19240 PF01138 3' exoribonuclease family, domain 1 ISU59_19240 PF03725 3' exoribonuclease family, domain 2 ISU59_19245 PF03755 YicC-like family, N-terminal region ISU59_19245 PF08340 Domain of unknown function (DUF1732) ISU59_19250 PF03458 UPF0126 domain ISU59_19255 PF03120 NAD-dependent DNA ligase OB-fold domain ISU59_19255 PF01653 NAD-dependent DNA ligase adenylation domain ISU59_19260 PF00625 Guanylate kinase ISU59_19265 PF01192 RNA polymerase Rpb6 ISU59_19270 PF02824 TGS domain ISU59_19270 PF13291 ACT domain ISU59_19270 PF04607 Region found in RelA / SpoT proteins ISU59_19275 PF00588 SpoU rRNA Methylase family ISU59_19275 PF12105 SpoU, rRNA methylase, C-terminal ISU59_19280 PF00270 DEAD/DEAH box helicase ISU59_19280 PF17191 RecG wedge domain ISU59_19280 PF00271 Helicase conserved C-terminal domain ISU59_19290 PF03616 Sodium/glutamate symporter ISU59_19295 PF00860 Permease family ISU59_19300 PF05170 AsmA family ISU59_19305 PF09500 Putative thioesterase (yiiD_Cterm) ISU59_19305 PF00583 Acetyltransferase (GNAT) family ISU59_19310 PF00665 Integrase core domain ISU59_19310 PF02796 Helix-turn-helix domain of resolvase ISU59_19325 PF03466 LysR substrate binding domain ISU59_19325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_19330 PF17954 Quercetinase C-terminal cupin domain ISU59_19330 PF02678 Pirin ISU59_19340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU59_19345 PF04348 LppC putative lipoprotein ISU59_19350 PF02021 Uncharacterised protein family UPF0102 ISU59_19355 PF13580 SIS domain ISU59_19360 PF04972 BON domain ISU59_19365 PF00912 Transglycosylase ISU59_19375 PF00989 PAS fold ISU59_19375 PF01627 Hpt domain ISU59_19375 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU59_19375 PF00072 Response regulator receiver domain ISU59_19375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU59_19375 PF00512 His Kinase A (phospho-acceptor) domain ISU59_19380 PF16199 Radical_SAM C-terminal domain ISU59_19380 PF04055 Radical SAM superfamily ISU59_19385 PF00310 Glutamine amidotransferases class-II ISU59_19385 PF04898 Glutamate synthase central domain ISU59_19385 PF01645 Conserved region in glutamate synthase ISU59_19385 PF01493 GXGXG motif ISU59_19390 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU59_19390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU59_19400 PF04386 Stringent starvation protein B ISU59_19405 PF00043 Glutathione S-transferase, C-terminal domain ISU59_19405 PF02798 Glutathione S-transferase, N-terminal domain ISU59_19415 PF00380 Ribosomal protein S9/S16 ISU59_19420 PF00572 Ribosomal protein L13 ISU59_19425 PF03969 AFG1-like ATPase ISU59_19430 PF06295 Protein of unknown function (DUF1043) ISU59_19435 PF13180 PDZ domain ISU59_19435 PF00595 PDZ domain ISU59_19440 PF01797 Transposase IS200 like ISU59_19445 PF13180 PDZ domain ISU59_19450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU59_19455 PF01722 BolA-like protein ISU59_19460 PF13466 STAS domain ISU59_19465 PF05494 MlaC protein ISU59_19470 PF02470 MlaD protein ISU59_19475 PF02405 Permease MlaE ISU59_19480 PF00005 ABC transporter ISU59_19485 PF01699 Sodium/calcium exchanger protein ISU59_19490 PF00571 CBS domain ISU59_19490 PF01380 SIS domain ISU59_19500 PF06835 Lipopolysaccharide-assembly, LptC-related ISU59_19505 PF03968 OstA-like protein ISU59_19510 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU59_19510 PF00005 ABC transporter ISU59_19515 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU59_19515 PF04963 Sigma-54 factor, core binding domain ISU59_19515 PF04552 Sigma-54, DNA binding domain ISU59_19525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU59_19530 PF03668 P-loop ATPase protein family ISU59_19535 PF00381 PTS HPr component phosphorylation site ISU59_19540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU59_19540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU59_19545 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU59_19545 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU59_19550 PF01042 Endoribonuclease L-PSP ISU59_19560 PF00356 Bacterial regulatory proteins, lacI family ISU59_19565 PF02378 Phosphotransferase system, EIIC ISU59_19565 PF00367 phosphotransferase system, EIIB ISU59_19570 PF11941 Domain of unknown function (DUF3459) ISU59_19570 PF00128 Alpha amylase, catalytic domain ISU59_19575 PF14760 Rnk N-terminus ISU59_19575 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU59_19580 PF07361 Cytochrome b562 ISU59_19590 PF01523 Putative modulator of DNA gyrase ISU59_19595 PF04751 Protein of unknown function (DUF615) ISU59_19600 PF01337 Barstar (barnase inhibitor) ISU59_19615 PF04632 Fusaric acid resistance protein family ISU59_19620 PF13533 Biotin-lipoyl like ISU59_19625 PF07869 Protein of unknown function (DUF1656) ISU59_19630 PF03466 LysR substrate binding domain ISU59_19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU59_19635 PF03466 LysR substrate binding domain ISU59_19645 PF18413 Neuraminidase-like domain ISU59_19645 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU59_19650 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU59_19650 PF03534 Salmonella virulence plasmid 65kDa B protein ISU59_19650 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU59_19670 PF18807 Tripartite Tc toxins repeat ISU59_19670 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU59_19675 PF18807 Tripartite Tc toxins repeat ISU59_19675 PF14431 YwqJ-like deaminase ISU59_19680 PF01523 Putative modulator of DNA gyrase ISU59_19685 PF00795 Carbon-nitrogen hydrolase ISU59_19690 PF13116 Protein of unknown function ISU59_19690 PF13502 AsmA-like C-terminal region ISU59_19695 PF10150 Ribonuclease E/G family ISU59_19695 PF00575 S1 RNA binding domain ISU59_19700 PF02545 Maf-like protein ISU59_19705 PF04093 rod shape-determining protein MreD ISU59_19710 PF04085 rod shape-determining protein MreC ISU59_19720 PF17157 Gammaproteobacterial periplasmic sensor domain ISU59_19720 PF00990 Diguanylate cyclase, GGDEF domain ISU59_19720 PF00563 EAL domain ISU59_19725 PF00107 Zinc-binding dehydrogenase ISU59_19725 PF08240 Alcohol dehydrogenase GroES-like domain ISU59_19730 PF00174 Oxidoreductase molybdopterin binding domain ISU59_19735 PF01794 Ferric reductase like transmembrane component ISU59_19740 PF01220 Dehydroquinase class II ISU59_19745 PF00364 Biotin-requiring enzyme ISU59_19750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU59_19750 PF00289 Biotin carboxylase, N-terminal domain ISU59_19750 PF02785 Biotin carboxylase C-terminal domain ISU59_19760 PF06196 Protein of unknown function (DUF997) ISU59_19765 PF00474 Sodium:solute symporter family ISU59_19775 PF01207 Dihydrouridine synthase (Dus) ISU59_19780 PF02954 Bacterial regulatory protein, Fis family ISU59_19805 PF07690 Major Facilitator Superfamily ISU59_19810 PF02627 Carboxymuconolactone decarboxylase family ISU59_19815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU59_19815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU59_19820 PF00753 Metallo-beta-lactamase superfamily ISU59_19825 PF05433 Glycine zipper 2TM domain ISU59_19830 PF00313 'Cold-shock' DNA-binding domain ISU59_19835 PF00313 'Cold-shock' DNA-binding domain ISU59_19840 PF01797 Transposase IS200 like ISU59_19855 PF02798 Glutathione S-transferase, N-terminal domain ISU59_19860 PF00571 CBS domain ISU59_19860 PF01380 SIS domain ISU59_19865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU59_19865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU59_19875 PF02653 Branched-chain amino acid transport system / permease component ISU59_19880 PF00005 ABC transporter ISU59_19890 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU59_19900 PF00999 Sodium/hydrogen exchanger family ISU59_19905 PF00860 Permease family ISU59_19910 PF04221 RelB antitoxin ISU59_19920 PF00005 ABC transporter ISU59_19925 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_19930 PF00296 Luciferase-like monooxygenase ISU59_19935 PF09084 NMT1/THI5 like ISU59_19940 PF03358 NADPH-dependent FMN reductase ISU59_19945 PF01791 DeoC/LacD family aldolase ISU59_19950 PF00294 pfkB family carbohydrate kinase ISU59_19955 PF05025 RbsD / FucU transport protein family ISU59_19960 PF12833 Helix-turn-helix domain ISU59_19960 PF02311 AraC-like ligand binding domain ISU59_19965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU59_19965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU59_19995 PF04717 Type VI secretion system, phage-baseplate injector ISU59_20025 PF03527 RHS protein ISU59_20025 PF05593 RHS Repeat ISU59_20040 PF04717 Type VI secretion system, phage-baseplate injector ISU59_20075 PF00004 ATPase family associated with various cellular activities (AAA) ISU59_20075 PF07724 AAA domain (Cdc48 subfamily) ISU59_20075 PF10431 C-terminal, D2-small domain, of ClpB protein ISU59_20075 PF17871 AAA lid domain ISU59_20085 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU59_20115 PF00665 Integrase core domain ISU59_20115 PF02796 Helix-turn-helix domain of resolvase ISU59_20120 PF01695 IstB-like ATP binding protein ISU59_20140 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU59_20150 PF05638 Type VI secretion system effector, Hcp ISU59_20160 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU59_20165 PF02264 LamB porin ISU59_20170 PF00005 ABC transporter ISU59_20170 PF17912 MalK OB fold domain ISU59_20180 PF01547 Bacterial extracellular solute-binding protein ISU59_20185 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_20185 PF14785 Maltose transport system permease protein MalF P2 domain ISU59_20190 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_20195 PF06146 Phosphate-starvation-inducible E ISU59_20200 PF00342 Phosphoglucose isomerase ISU59_20205 PF01842 ACT domain ISU59_20205 PF00696 Amino acid kinase family ISU59_20210 PF17287 POTRA domain ISU59_20210 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU59_20210 PF08479 POTRA domain, ShlB-type ISU59_20215 PF13332 Hemagglutinin repeat ISU59_20215 PF05860 haemagglutination activity domain ISU59_20220 PF02310 B12 binding domain ISU59_20220 PF02607 B12 binding domain ISU59_20220 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISU59_20220 PF00809 Pterin binding enzyme ISU59_20220 PF02574 Homocysteine S-methyltransferase ISU59_20230 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU59_20235 PF00463 Isocitrate lyase family ISU59_20240 PF01274 Malate synthase ISU59_20245 PF04204 Homoserine O-succinyltransferase ISU59_20280 PF07729 FCD domain ISU59_20280 PF00392 Bacterial regulatory proteins, gntR family ISU59_20285 PF07690 Major Facilitator Superfamily ISU59_20300 PF00294 pfkB family carbohydrate kinase ISU59_20305 PF05025 RbsD / FucU transport protein family ISU59_20310 PF00665 Integrase core domain ISU59_20310 PF02796 Helix-turn-helix domain of resolvase ISU59_20315 PF01695 IstB-like ATP binding protein ISU59_20320 PF02705 K+ potassium transporter ISU59_20325 PF07728 AAA domain (dynein-related subfamily) ISU59_20325 PF17868 AAA lid domain ISU59_20325 PF12592 Protein of unknown function (DUF3763) ISU59_20335 PF03590 Aspartate-ammonia ligase ISU59_20340 PF01037 Lrp/AsnC ligand binding domain ISU59_20345 PF00258 Flavodoxin ISU59_20350 PF01134 Glucose inhibited division protein A ISU59_20350 PF13932 GidA associated domain ISU59_20355 PF02527 rRNA small subunit methyltransferase G ISU59_20360 PF03899 ATP synthase I chain ISU59_20365 PF00119 ATP synthase A chain ISU59_20370 PF00137 ATP synthase subunit C ISU59_20375 PF00430 ATP synthase B/B' CF(0) ISU59_20380 PF00213 ATP synthase delta (OSCP) subunit ISU59_20385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU59_20385 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU59_20385 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU59_20390 PF00231 ATP synthase ISU59_20395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU59_20395 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU59_20400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU59_20400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU59_20405 PF12804 MobA-like NTP transferase domain ISU59_20405 PF00132 Bacterial transferase hexapeptide (six repeats) ISU59_20410 PF01380 SIS domain ISU59_20415 PF12849 PBP superfamily domain ISU59_20420 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_20425 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_20430 PF00005 ABC transporter ISU59_20435 PF01895 PhoU domain ISU59_20445 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU59_20450 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_20455 PF00528 Binding-protein-dependent transport system inner membrane component ISU59_20460 PF13419 Haloacid dehalogenase-like hydrolase ISU59_20470 PF00860 Permease family ISU59_20490 PF07055 Enoyl reductase FAD binding domain ISU59_20490 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU59_20490 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU59_20495 PF10396 GTP-binding protein TrmE N-terminus ISU59_20495 PF12631 MnmE helical domain ISU59_20495 PF01926 50S ribosome-binding GTPase ISU59_20500 PF14849 YidC periplasmic domain ISU59_20500 PF02096 60Kd inner membrane protein ISU59_20505 PF01809 Putative membrane protein insertion efficiency factor ISU59_20510 PF00825 Ribonuclease P ISU59_20515 PF00468 Ribosomal protein L34