locus-tag class description ISU61_00005 PF11638 DnaA N-terminal domain ISU61_00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU61_00005 PF00308 Bacterial dnaA protein ISU61_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU61_00010 PF02767 DNA polymerase III beta subunit, central domain ISU61_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU61_00020 PF02463 RecF/RecN/SMC N terminal domain ISU61_00025 PF01751 Toprim domain ISU61_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_00025 PF18053 DNA gyrase B subunit insert domain ISU61_00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU61_00025 PF00204 DNA gyrase B ISU61_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU61_00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_00045 PF13291 ACT domain ISU61_00055 PF07119 Protein of unknown function (DUF1375) ISU61_00060 PF00011 Hsp20/alpha crystallin family ISU61_00065 PF00011 Hsp20/alpha crystallin family ISU61_00070 PF06826 Predicted Permease Membrane Region ISU61_00070 PF02080 TrkA-C domain ISU61_00075 PF00155 Aminotransferase class I and II ISU61_00085 PF00128 Alpha amylase, catalytic domain ISU61_00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU61_00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU61_00100 PF00691 OmpA family ISU61_00100 PF13488 Glycine zipper ISU61_00110 PF03352 Methyladenine glycosylase ISU61_00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU61_00120 PF05746 DALR anticodon binding domain ISU61_00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU61_00130 PF11254 Protein of unknown function (DUF3053) ISU61_00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU61_00135 PF02378 Phosphotransferase system, EIIC ISU61_00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU61_00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU61_00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU61_00145 PF05068 Mannitol repressor ISU61_00150 PF10928 Protein of unknown function (DUF2810) ISU61_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU61_00165 PF02203 Tar ligand binding domain homologue ISU61_00165 PF00672 HAMP domain ISU61_00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU61_00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU61_00175 PF02634 FdhD/NarQ family ISU61_00185 PF09163 Formate dehydrogenase N, transmembrane ISU61_00185 PF13247 4Fe-4S dicluster domain ISU61_00190 PF01292 Prokaryotic cytochrome b561 ISU61_00195 PF04216 Protein involved in formate dehydrogenase formation ISU61_00200 PF12390 Selenocysteine synthase N terminal ISU61_00200 PF03841 L-seryl-tRNA selenium transferase ISU61_00205 PF09106 Elongation factor SelB, winged helix ISU61_00205 PF00009 Elongation factor Tu GTP binding domain ISU61_00205 PF09107 Elongation factor SelB, winged helix ISU61_00205 PF03144 Elongation factor Tu domain 2 ISU61_00235 PF07690 Major Facilitator Superfamily ISU61_00250 PF01757 Acyltransferase family ISU61_00255 PF00419 Fimbrial protein ISU61_00265 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_00265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_00275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_00275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_00285 PF13407 Periplasmic binding protein domain ISU61_00290 PF00005 ABC transporter ISU61_00295 PF02653 Branched-chain amino acid transport system / permease component ISU61_00300 PF12833 Helix-turn-helix domain ISU61_00310 PF00589 Phage integrase family ISU61_00310 PF13356 Arm DNA-binding domain ISU61_00310 PF14659 Phage integrase, N-terminal SAM-like domain ISU61_00320 PF04606 Ogr/Delta-like zinc finger ISU61_00355 PF00005 ABC transporter ISU61_00360 PF01032 FecCD transport family ISU61_00365 PF01032 FecCD transport family ISU61_00370 PF01497 Periplasmic binding protein ISU61_00385 PF00156 Phosphoribosyl transferase domain ISU61_00390 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_00395 PF01175 Urocanase Rossmann-like domain ISU61_00395 PF17391 Urocanase N-terminal domain ISU61_00395 PF17392 Urocanase C-terminal domain ISU61_00400 PF00221 Aromatic amino acid lyase ISU61_00410 PF00665 Integrase core domain ISU61_00410 PF02796 Helix-turn-helix domain of resolvase ISU61_00415 PF01695 IstB-like ATP binding protein ISU61_00420 PF01026 TatD related DNase ISU61_00425 PF00490 Delta-aminolevulinic acid dehydratase ISU61_00430 PF02357 Transcription termination factor nusG ISU61_00435 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU61_00440 PF00175 Oxidoreductase NAD-binding domain ISU61_00440 PF00970 Oxidoreductase FAD-binding domain ISU61_00445 PF00108 Thiolase, N-terminal domain ISU61_00445 PF02803 Thiolase, C-terminal domain ISU61_00450 PF00378 Enoyl-CoA hydratase/isomerase ISU61_00450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU61_00450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU61_00455 PF00557 Metallopeptidase family M24 ISU61_00460 PF09186 Domain of unknown function (DUF1949) ISU61_00460 PF01205 Uncharacterized protein family UPF0029 ISU61_00465 PF02386 Cation transport protein ISU61_00470 PF12724 Flavodoxin domain ISU61_00495 PF01565 FAD binding domain ISU61_00495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU61_00500 PF08279 HTH domain ISU61_00500 PF02237 Biotin protein ligase C terminal domain ISU61_00500 PF03099 Biotin/lipoate A/B protein ligase family ISU61_00505 PF00485 Phosphoribulokinase / Uridine kinase family ISU61_00510 PF13673 Acetyltransferase (GNAT) domain ISU61_00515 PF00665 Integrase core domain ISU61_00515 PF02796 Helix-turn-helix domain of resolvase ISU61_00520 PF01695 IstB-like ATP binding protein ISU61_00545 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU61_00545 PF01266 FAD dependent oxidoreductase ISU61_00550 PF00343 Carbohydrate phosphorylase ISU61_00555 PF00534 Glycosyl transferases group 1 ISU61_00555 PF08323 Starch synthase catalytic domain ISU61_00565 PF18390 Glycogen debranching enzyme C-terminal domain ISU61_00565 PF00128 Alpha amylase, catalytic domain ISU61_00565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU61_00570 PF02806 Alpha amylase, C-terminal all-beta domain ISU61_00570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU61_00570 PF00128 Alpha amylase, catalytic domain ISU61_00575 PF07694 5TMR of 5TMR-LYT ISU61_00575 PF06580 Histidine kinase ISU61_00580 PF02369 Bacterial Ig-like domain (group 1) ISU61_00580 PF11924 Inverse autotransporter, beta-domain ISU61_00580 PF07979 Intimin C-type lectin domain ISU61_00580 PF09134 Invasin, domain 3 ISU61_00610 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU61_00610 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU61_00615 PF01914 MarC family integral membrane protein ISU61_00630 PF01202 Shikimate kinase ISU61_00635 PF02447 GntP family permease ISU61_00640 PF00356 Bacterial regulatory proteins, lacI family ISU61_00640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU61_00645 PF02678 Pirin ISU61_00645 PF17954 Quercetinase C-terminal cupin domain ISU61_00655 PF00486 Transcriptional regulatory protein, C terminal ISU61_00655 PF00072 Response regulator receiver domain ISU61_00665 PF01116 Fructose-bisphosphate aldolase class-II ISU61_00675 PF13407 Periplasmic binding protein domain ISU61_00680 PF02653 Branched-chain amino acid transport system / permease component ISU61_00685 PF00005 ABC transporter ISU61_00690 PF00072 Response regulator receiver domain ISU61_00690 PF13188 PAS domain ISU61_00690 PF08448 PAS fold ISU61_00690 PF00512 His Kinase A (phospho-acceptor) domain ISU61_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_00700 PF01384 Phosphate transporter family ISU61_00705 PF01797 Transposase IS200 like ISU61_00710 PF10625 Universal stress protein B (UspB) ISU61_00715 PF00582 Universal stress protein family ISU61_00720 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU61_00720 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU61_00725 PF08548 Peptidase M10 serralysin C terminal ISU61_00725 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU61_00725 PF00413 Matrixin ISU61_00730 PF04445 Putative SAM-dependent methyltransferase ISU61_00735 PF01432 Peptidase family M3 ISU61_00740 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU61_00745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_00745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU61_00750 PF05651 Putative sugar diacid recognition ISU61_00750 PF13556 PucR C-terminal helix-turn-helix domain ISU61_00750 PF17853 GGDEF-like domain ISU61_00760 PF02447 GntP family permease ISU61_00765 PF02595 Glycerate kinase family ISU61_00790 PF03631 Virulence factor BrkB ISU61_00795 PF02611 CDP-diacylglycerol pyrophosphatase ISU61_00800 PF05170 AsmA family ISU61_00805 PF00563 EAL domain ISU61_00810 PF01361 Tautomerase enzyme ISU61_00815 PF00294 pfkB family carbohydrate kinase ISU61_00820 PF05193 Peptidase M16 inactive domain ISU61_00820 PF00675 Insulinase (Peptidase family M16) ISU61_00825 PF00375 Sodium:dicarboxylate symporter family ISU61_00835 PF06917 Periplasmic pectate lyase ISU61_00840 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU61_00845 PF17154 Gammaproteobacterial periplasmic sensor domain ISU61_00845 PF00990 Diguanylate cyclase, GGDEF domain ISU61_00845 PF00672 HAMP domain ISU61_00845 PF00563 EAL domain ISU61_00850 PF01270 Glycosyl hydrolases family 8 ISU61_00855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_00855 PF00005 ABC transporter ISU61_00860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_00860 PF00005 ABC transporter ISU61_00865 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_00865 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU61_00870 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_00875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_00880 PF17287 POTRA domain ISU61_00880 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU61_00880 PF08479 POTRA domain, ShlB-type ISU61_00885 PF13332 Hemagglutinin repeat ISU61_00885 PF05594 Haemagluttinin repeat ISU61_00885 PF05860 haemagglutination activity domain ISU61_00885 PF04829 Pre-toxin domain with VENN motif ISU61_00895 PF07690 Major Facilitator Superfamily ISU61_00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_00900 PF07730 Histidine kinase ISU61_00900 PF05231 MASE1 ISU61_00905 PF00196 Bacterial regulatory proteins, luxR family ISU61_00905 PF00072 Response regulator receiver domain ISU61_00910 PF08019 Phosphoethanolamine transferase EptA/EptB ISU61_00910 PF00884 Sulfatase ISU61_00915 PF12146 Serine aminopeptidase, S33 ISU61_00925 PF01695 IstB-like ATP binding protein ISU61_00930 PF00665 Integrase core domain ISU61_00930 PF02796 Helix-turn-helix domain of resolvase ISU61_00940 PF00455 DeoR C terminal sensor domain ISU61_00940 PF08220 DeoR-like helix-turn-helix domain ISU61_00945 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU61_00945 PF01694 Rhomboid family ISU61_00950 PF00581 Rhodanese-like domain ISU61_00955 PF00196 Bacterial regulatory proteins, luxR family ISU61_00955 PF17874 MalT-like TPR region ISU61_00960 PF00343 Carbohydrate phosphorylase ISU61_00965 PF00343 Carbohydrate phosphorylase ISU61_00970 PF02446 4-alpha-glucanotransferase ISU61_00975 PF01521 Iron-sulphur cluster biosynthesis ISU61_00975 PF01106 NifU-like domain ISU61_00980 PF00156 Phosphoribosyl transferase domain ISU61_00985 PF00561 alpha/beta hydrolase fold ISU61_00990 PF07338 Protein of unknown function (DUF1471) ISU61_00995 PF09012 FeoC like transcriptional regulator ISU61_01000 PF02421 Ferrous iron transport protein B ISU61_01000 PF17910 FeoB cytosolic helical domain ISU61_01000 PF07664 Ferrous iron transport protein B C terminus ISU61_01000 PF07670 Nucleoside recognition ISU61_01005 PF04023 FeoA domain ISU61_01010 PF17674 HHH domain ISU61_01010 PF09371 Tex-like protein N-terminal domain ISU61_01010 PF00575 S1 RNA binding domain ISU61_01010 PF16921 Tex protein YqgF-like domain ISU61_01015 PF03449 Transcription elongation factor, N-terminal ISU61_01015 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU61_01020 PF00486 Transcriptional regulatory protein, C terminal ISU61_01020 PF00072 Response regulator receiver domain ISU61_01025 PF00672 HAMP domain ISU61_01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_01025 PF00512 His Kinase A (phospho-acceptor) domain ISU61_01030 PF01293 Phosphoenolpyruvate carboxykinase ISU61_01035 PF01430 Hsp33 protein ISU61_01040 PF01479 S4 domain ISU61_01045 PF13419 Haloacid dehalogenase-like hydrolase ISU61_01050 PF07095 Intracellular growth attenuator protein IgaA ISU61_01055 PF00293 NUDIX domain ISU61_01060 PF00905 Penicillin binding protein transpeptidase domain ISU61_01060 PF17092 Penicillin-binding protein OB-like domain ISU61_01060 PF00912 Transglycosylase ISU61_01085 PF00263 Bacterial type II and III secretion system protein ISU61_01085 PF03958 Bacterial type II/III secretion system short domain ISU61_01090 PF01202 Shikimate kinase ISU61_01095 PF01761 3-dehydroquinate synthase ISU61_01100 PF05036 Sporulation related domain ISU61_01105 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU61_01110 PF00834 Ribulose-phosphate 3 epimerase family ISU61_01115 PF13419 Haloacid dehalogenase-like hydrolase ISU61_01120 PF00579 tRNA synthetases class I (W and Y) ISU61_01125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU61_01125 PF10414 Sirohaem synthase dimerisation region ISU61_01125 PF14824 Sirohaem biosynthesis protein central ISU61_01130 PF01226 Formate/nitrite transporter ISU61_01135 PF13806 Rieske-like [2Fe-2S] domain ISU61_01140 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_01140 PF04324 BFD-like [2Fe-2S] binding domain ISU61_01140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU61_01140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU61_01140 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU61_01145 PF07969 Amidohydrolase family ISU61_01150 PF07690 Major Facilitator Superfamily ISU61_01160 PF00356 Bacterial regulatory proteins, lacI family ISU61_01165 PF02056 Family 4 glycosyl hydrolase ISU61_01165 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU61_01170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU61_01175 PF05872 Bacterial protein of unknown function (DUF853) ISU61_01180 PF00117 Glutamine amidotransferase class-I ISU61_01185 PF00202 Aminotransferase class-III ISU61_01190 PF12805 FUSC-like inner membrane protein yccS ISU61_01195 PF13545 Crp-like helix-turn-helix domain ISU61_01195 PF00027 Cyclic nucleotide-binding domain ISU61_01200 PF02566 OsmC-like protein ISU61_01210 PF00485 Phosphoribulokinase / Uridine kinase family ISU61_01215 PF06794 Uncharacterised protein family (UPF0270) ISU61_01220 PF00561 alpha/beta hydrolase fold ISU61_01225 PF01810 LysE type translocator ISU61_01230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU61_01235 PF00005 ABC transporter ISU61_01240 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_01245 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU61_01255 PF00535 Glycosyl transferase family 2 ISU61_01265 PF02525 Flavodoxin-like fold ISU61_01270 PF00999 Sodium/hydrogen exchanger family ISU61_01270 PF02254 TrkA-N domain ISU61_01275 PF09526 Probable metal-binding protein (DUF2387) ISU61_01280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU61_01285 PF04102 SlyX ISU61_01290 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU61_01290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU61_01295 PF13309 HTH domain ISU61_01295 PF08348 YheO-like PAS domain ISU61_01300 PF02635 DsrE/DsrF-like family ISU61_01305 PF02635 DsrE/DsrF-like family ISU61_01310 PF04077 DsrH like protein ISU61_01315 PF00164 Ribosomal protein S12/S23 ISU61_01320 PF00177 Ribosomal protein S7p/S5e ISU61_01325 PF03144 Elongation factor Tu domain 2 ISU61_01325 PF00009 Elongation factor Tu GTP binding domain ISU61_01325 PF03764 Elongation factor G, domain IV ISU61_01325 PF14492 Elongation Factor G, domain II ISU61_01325 PF00679 Elongation factor G C-terminus ISU61_01330 PF03143 Elongation factor Tu C-terminal domain ISU61_01330 PF00009 Elongation factor Tu GTP binding domain ISU61_01330 PF03144 Elongation factor Tu domain 2 ISU61_01335 PF01797 Transposase IS200 like ISU61_01340 PF04324 BFD-like [2Fe-2S] binding domain ISU61_01345 PF00210 Ferritin-like domain ISU61_01350 PF00338 Ribosomal protein S10p/S20e ISU61_01355 PF00297 Ribosomal protein L3 ISU61_01360 PF00573 Ribosomal protein L4/L1 family ISU61_01365 PF00276 Ribosomal protein L23 ISU61_01370 PF00181 Ribosomal Proteins L2, RNA binding domain ISU61_01370 PF03947 Ribosomal Proteins L2, C-terminal domain ISU61_01375 PF00203 Ribosomal protein S19 ISU61_01380 PF00237 Ribosomal protein L22p/L17e ISU61_01385 PF07650 KH domain ISU61_01385 PF00189 Ribosomal protein S3, C-terminal domain ISU61_01390 PF00252 Ribosomal protein L16p/L10e ISU61_01395 PF00831 Ribosomal L29 protein ISU61_01400 PF00366 Ribosomal protein S17 ISU61_01405 PF00238 Ribosomal protein L14p/L23e ISU61_01410 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU61_01410 PF00467 KOW motif ISU61_01415 PF00281 Ribosomal protein L5 ISU61_01415 PF00673 ribosomal L5P family C-terminus ISU61_01420 PF00253 Ribosomal protein S14p/S29e ISU61_01425 PF00410 Ribosomal protein S8 ISU61_01430 PF00347 Ribosomal protein L6 ISU61_01435 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU61_01440 PF03719 Ribosomal protein S5, C-terminal domain ISU61_01440 PF00333 Ribosomal protein S5, N-terminal domain ISU61_01445 PF00327 Ribosomal protein L30p/L7e ISU61_01450 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU61_01455 PF00344 SecY translocase ISU61_01460 PF00444 Ribosomal protein L36 ISU61_01465 PF00416 Ribosomal protein S13/S18 ISU61_01470 PF00411 Ribosomal protein S11 ISU61_01475 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU61_01475 PF01479 S4 domain ISU61_01480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU61_01480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU61_01480 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU61_01485 PF01196 Ribosomal protein L17 ISU61_01490 PF13411 MerR HTH family regulatory protein ISU61_01495 PF03889 Alternative ribosome-rescue factor A ISU61_01500 PF01741 Large-conductance mechanosensitive channel, MscL ISU61_01505 PF02080 TrkA-C domain ISU61_01505 PF02254 TrkA-N domain ISU61_01510 PF01189 16S rRNA methyltransferase RsmB/F ISU61_01510 PF01029 NusB family ISU61_01515 PF02911 Formyl transferase, C-terminal domain ISU61_01515 PF00551 Formyl transferase ISU61_01520 PF01327 Polypeptide deformylase ISU61_01525 PF02481 DNA recombination-mediator protein A ISU61_01525 PF17782 DprA winged helix domain ISU61_01530 PF04361 Protein of unknown function (DUF494) ISU61_01535 PF01396 Topoisomerase DNA binding C4 zinc finger ISU61_01540 PF01300 Telomere recombination ISU61_01545 PF08501 Shikimate dehydrogenase substrate binding domain ISU61_01545 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU61_01545 PF01488 Shikimate / quinate 5-dehydrogenase ISU61_01550 PF00132 Bacterial transferase hexapeptide (six repeats) ISU61_01585 PF01695 IstB-like ATP binding protein ISU61_01590 PF02796 Helix-turn-helix domain of resolvase ISU61_01590 PF00665 Integrase core domain ISU61_01600 PF00474 Sodium:solute symporter family ISU61_01605 PF04341 Protein of unknown function, DUF485 ISU61_01610 PF13193 AMP-binding enzyme C-terminal domain ISU61_01610 PF00501 AMP-binding enzyme ISU61_01610 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU61_01620 PF00196 Bacterial regulatory proteins, luxR family ISU61_01620 PF00072 Response regulator receiver domain ISU61_01625 PF00672 HAMP domain ISU61_01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_01625 PF01627 Hpt domain ISU61_01625 PF00512 His Kinase A (phospho-acceptor) domain ISU61_01625 PF00072 Response regulator receiver domain ISU61_01625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU61_01630 PF03958 Bacterial type II/III secretion system short domain ISU61_01630 PF00263 Bacterial type II and III secretion system protein ISU61_01645 PF14525 AraC-binding-like domain ISU61_01645 PF12833 Helix-turn-helix domain ISU61_01665 PF01514 Secretory protein of YscJ/FliF family ISU61_01680 PF00771 FHIPEP family ISU61_01685 PF18269 T3SS EscN ATPase C-terminal domain ISU61_01685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU61_01700 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU61_01705 PF00813 FliP family ISU61_01710 PF01313 Bacterial export proteins, family 3 ISU61_01715 PF01311 Bacterial export proteins, family 1 ISU61_01720 PF01312 FlhB HrpN YscU SpaS Family ISU61_01725 PF04143 Sulphur transport ISU61_01730 PF01206 Sulfurtransferase TusA ISU61_01735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_01735 PF03466 LysR substrate binding domain ISU61_01740 PF03222 Tryptophan/tyrosine permease family ISU61_01745 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU61_01750 PF00005 ABC transporter ISU61_01755 PF01032 FecCD transport family ISU61_01760 PF01497 Periplasmic binding protein ISU61_01765 PF05171 Haemin-degrading HemS.ChuX domain ISU61_01770 PF00593 TonB dependent receptor ISU61_01770 PF07715 TonB-dependent Receptor Plug Domain ISU61_01775 PF10636 Hemin uptake protein hemP ISU61_01780 PF13460 NAD(P)H-binding ISU61_01785 PF06228 Haem utilisation ChuX/HutX ISU61_01790 PF04055 Radical SAM superfamily ISU61_01810 PF15608 PELOTA RNA binding domain ISU61_01810 PF11202 Phosphoribosyl transferase (PRTase) ISU61_01830 PF02342 TerD domain ISU61_01835 PF02342 TerD domain ISU61_01840 PF05099 Tellurite resistance protein TerB ISU61_01845 PF03741 Integral membrane protein TerC family ISU61_01850 PF02342 TerD domain ISU61_01855 PF02342 TerD domain ISU61_01865 PF00577 Outer membrane usher protein ISU61_01865 PF13953 PapC C-terminal domain ISU61_01865 PF13954 PapC N-terminal domain ISU61_01870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_01885 PF01565 FAD binding domain ISU61_01885 PF08031 Berberine and berberine like ISU61_01890 PF12951 Passenger-associated-transport-repeat ISU61_01895 PF04345 Chorismate lyase ISU61_01900 PF01040 UbiA prenyltransferase family ISU61_01905 PF01553 Acyltransferase ISU61_01910 PF01219 Prokaryotic diacylglycerol kinase ISU61_01915 PF01726 LexA DNA binding domain ISU61_01915 PF00717 Peptidase S24-like ISU61_01920 PF01475 Ferric uptake regulator family ISU61_01925 PF01207 Dihydrouridine synthase (Dus) ISU61_01930 PF09583 Phage shock protein G (Phageshock_PspG) ISU61_01935 PF08240 Alcohol dehydrogenase GroES-like domain ISU61_01935 PF00107 Zinc-binding dehydrogenase ISU61_01940 PF00772 DnaB-like helicase N terminal domain ISU61_01940 PF03796 DnaB-like helicase C terminal domain ISU61_01945 PF00842 Alanine racemase, C-terminal domain ISU61_01945 PF01168 Alanine racemase, N-terminal domain ISU61_01950 PF00155 Aminotransferase class I and II ISU61_01955 PF04237 YjbR ISU61_01960 PF00005 ABC transporter ISU61_01960 PF17755 UvrA DNA-binding domain ISU61_01960 PF17760 UvrA interaction domain ISU61_01965 PF00436 Single-strand binding protein family ISU61_01970 PF05336 L-rhamnose mutarotase ISU61_01975 PF00465 Iron-containing alcohol dehydrogenase ISU61_01980 PF00596 Class II Aldolase and Adducin N-terminal domain ISU61_01985 PF06134 L-rhamnose isomerase (RhaA) ISU61_01990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_01990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_02000 PF12833 Helix-turn-helix domain ISU61_02000 PF02311 AraC-like ligand binding domain ISU61_02005 PF02311 AraC-like ligand binding domain ISU61_02005 PF12833 Helix-turn-helix domain ISU61_02010 PF06379 L-rhamnose-proton symport protein (RhaT) ISU61_02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_02040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU61_02040 PF13247 4Fe-4S dicluster domain ISU61_02045 PF12800 4Fe-4S binding domain ISU61_02045 PF13247 4Fe-4S dicluster domain ISU61_02050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU61_02050 PF01568 Molydopterin dinucleotide binding domain ISU61_02050 PF00384 Molybdopterin oxidoreductase ISU61_02055 PF11412 Disulphide bond corrector protein DsbC ISU61_02055 PF02683 Cytochrome C biogenesis protein transmembrane region ISU61_02060 PF03091 CutA1 divalent ion tolerance protein ISU61_02065 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU61_02070 PF00206 Lyase ISU61_02070 PF10415 Fumarase C C-terminus ISU61_02075 PF04186 FxsA cytoplasmic membrane protein ISU61_02080 PF00166 Chaperonin 10 Kd subunit ISU61_02085 PF00118 TCP-1/cpn60 chaperonin family ISU61_02090 PF13698 Domain of unknown function (DUF4156) ISU61_02095 PF04055 Radical SAM superfamily ISU61_02100 PF08207 Elongation factor P (EF-P) KOW-like domain ISU61_02100 PF09285 Elongation factor P, C-terminal ISU61_02100 PF01132 Elongation factor P (EF-P) OB domain ISU61_02105 PF00893 Small Multidrug Resistance protein ISU61_02110 PF02313 Fumarate reductase subunit D ISU61_02115 PF02300 Fumarate reductase subunit C ISU61_02120 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU61_02120 PF13183 4Fe-4S dicluster domain ISU61_02125 PF00890 FAD binding domain ISU61_02125 PF02910 Fumarate reductase flavoprotein C-term ISU61_02135 PF00152 tRNA synthetases class II (D, K and N) ISU61_02140 PF00924 Mechanosensitive ion channel ISU61_02140 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU61_02140 PF12795 Mechanosensitive ion channel porin domain ISU61_02145 PF02666 Phosphatidylserine decarboxylase ISU61_02150 PF03193 RsgA GTPase ISU61_02155 PF00929 Exonuclease ISU61_02170 PF08331 Domain of unknown function (DUF1730) ISU61_02175 PF01256 Carbohydrate kinase ISU61_02175 PF03853 YjeF-related protein N-terminus ISU61_02180 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU61_02185 PF01520 N-acetylmuramoyl-L-alanine amidase ISU61_02190 PF01119 DNA mismatch repair protein, C-terminal domain ISU61_02190 PF08676 MutL C terminal dimerisation domain ISU61_02200 PF17209 Hfq protein ISU61_02205 PF01926 50S ribosome-binding GTPase ISU61_02205 PF13167 GTP-binding GTPase N-terminal ISU61_02205 PF16360 GTP-binding GTPase Middle Region ISU61_02210 PF01145 SPFH domain / Band 7 family ISU61_02210 PF12221 Bacterial membrane protein N terminal ISU61_02215 PF01145 SPFH domain / Band 7 family ISU61_02220 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU61_02225 PF00709 Adenylosuccinate synthetase ISU61_02230 PF02082 Transcriptional regulator ISU61_02235 PF08206 Ribonuclease B OB domain ISU61_02235 PF17876 Cold shock domain ISU61_02235 PF00773 RNB domain ISU61_02235 PF00575 S1 RNA binding domain ISU61_02235 PF08461 Ribonuclease R winged-helix domain ISU61_02240 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU61_02240 PF00588 SpoU rRNA Methylase family ISU61_02245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU61_02245 PF02770 Acyl-CoA dehydrogenase, middle domain ISU61_02245 PF18158 Adaptive response protein AidB N-terminal domain ISU61_02250 PF07338 Protein of unknown function (DUF1471) ISU61_02255 PF00326 Prolyl oligopeptidase family ISU61_02260 PF01250 Ribosomal protein S6 ISU61_02265 PF00436 Single-strand binding protein family ISU61_02270 PF01084 Ribosomal protein S18 ISU61_02275 PF03948 Ribosomal protein L9, C-terminal domain ISU61_02275 PF01281 Ribosomal protein L9, N-terminal domain ISU61_02280 PF00665 Integrase core domain ISU61_02280 PF02796 Helix-turn-helix domain of resolvase ISU61_02285 PF01695 IstB-like ATP binding protein ISU61_02290 PF01817 Chorismate mutase type II ISU61_02290 PF00800 Prephenate dehydratase ISU61_02295 PF02153 Prephenate dehydrogenase ISU61_02295 PF01817 Chorismate mutase type II ISU61_02300 PF00793 DAHP synthetase I family ISU61_02305 PF00072 Response regulator receiver domain ISU61_02305 PF04397 LytTr DNA-binding domain ISU61_02315 PF04338 Protein of unknown function, DUF481 ISU61_02320 PF01245 Ribosomal protein L19 ISU61_02325 PF01746 tRNA (Guanine-1)-methyltransferase ISU61_02330 PF01782 RimM N-terminal domain ISU61_02330 PF05239 PRC-barrel domain ISU61_02335 PF00886 Ribosomal protein S16 ISU61_02340 PF00448 SRP54-type protein, GTPase domain ISU61_02340 PF02978 Signal peptide binding domain ISU61_02340 PF02881 SRP54-type protein, helical bundle domain ISU61_02345 PF01578 Cytochrome C assembly protein ISU61_02350 PF01595 Cyclin M transmembrane N-terminal domain ISU61_02350 PF03471 Transporter associated domain ISU61_02350 PF00571 CBS domain ISU61_02355 PF02664 S-Ribosylhomocysteinase (LuxS) ISU61_02360 PF04262 Glutamate-cysteine ligase ISU61_02365 PF09335 SNARE associated Golgi protein ISU61_02370 PF13419 Haloacid dehalogenase-like hydrolase ISU61_02400 PF02599 Global regulator protein family ISU61_02405 PF01411 tRNA synthetases class II (A) ISU61_02405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU61_02405 PF02272 DHHA1 domain ISU61_02410 PF02631 RecX family ISU61_02415 PF00154 recA bacterial DNA recombination protein ISU61_02420 PF02464 Competence-damaged protein ISU61_02425 PF07690 Major Facilitator Superfamily ISU61_02440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_02440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_02445 PF02780 Transketolase, C-terminal domain ISU61_02445 PF02779 Transketolase, pyrimidine binding domain ISU61_02450 PF00456 Transketolase, thiamine diphosphate binding domain ISU61_02455 PF02653 Branched-chain amino acid transport system / permease component ISU61_02460 PF00005 ABC transporter ISU61_02470 PF13407 Periplasmic binding protein domain ISU61_02475 PF00141 Peroxidase ISU61_02480 PF07361 Cytochrome b562 ISU61_02485 PF01292 Prokaryotic cytochrome b561 ISU61_02490 PF02613 Nitrate reductase delta subunit ISU61_02495 PF04976 DMSO reductase anchor subunit (DmsC) ISU61_02500 PF12800 4Fe-4S binding domain ISU61_02500 PF13247 4Fe-4S dicluster domain ISU61_02505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU61_02505 PF00384 Molybdopterin oxidoreductase ISU61_02505 PF01568 Molydopterin dinucleotide binding domain ISU61_02510 PF00596 Class II Aldolase and Adducin N-terminal domain ISU61_02515 PF08220 DeoR-like helix-turn-helix domain ISU61_02515 PF00455 DeoR C terminal sensor domain ISU61_02525 PF00005 ABC transporter ISU61_02530 PF02653 Branched-chain amino acid transport system / permease component ISU61_02535 PF02653 Branched-chain amino acid transport system / permease component ISU61_02540 PF01261 Xylose isomerase-like TIM barrel ISU61_02545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_02545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_02550 PF05683 Fumarase C-terminus ISU61_02550 PF05681 Fumarate hydratase (Fumerase) ISU61_02560 PF00557 Metallopeptidase family M24 ISU61_02570 PF00593 TonB dependent receptor ISU61_02570 PF07715 TonB-dependent Receptor Plug Domain ISU61_02580 PF00872 Transposase, Mutator family ISU61_02585 PF03150 Di-haem cytochrome c peroxidase ISU61_02585 PF00034 Cytochrome c ISU61_02585 PF14376 Haem-binding domain ISU61_02590 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_02605 PF01022 Bacterial regulatory protein, arsR family ISU61_02610 PF02040 Arsenical pump membrane protein ISU61_02615 PF04198 Putative sugar-binding domain ISU61_02615 PF13936 Helix-turn-helix domain ISU61_02620 PF02734 DAK2 domain ISU61_02625 PF02733 Dak1 domain ISU61_02635 PF00107 Zinc-binding dehydrogenase ISU61_02635 PF08240 Alcohol dehydrogenase GroES-like domain ISU61_02640 PF02502 Ribose/Galactose Isomerase ISU61_02645 PF01624 MutS domain I ISU61_02645 PF05188 MutS domain II ISU61_02645 PF05192 MutS domain III ISU61_02645 PF05190 MutS family domain IV ISU61_02645 PF00488 MutS domain V ISU61_02650 PF04542 Sigma-70 region 2 ISU61_02650 PF04539 Sigma-70 region 3 ISU61_02650 PF04545 Sigma-70, region 4 ISU61_02650 PF00140 Sigma-70 factor, region 1.2 ISU61_02655 PF01476 LysM domain ISU61_02655 PF01551 Peptidase family M23 ISU61_02665 PF01975 Survival protein SurE ISU61_02670 PF01142 tRNA pseudouridine synthase D (TruD) ISU61_02675 PF02542 YgbB family ISU61_02680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU61_02685 PF04977 Septum formation initiator ISU61_02690 PF12084 Protein of unknown function (DUF3561) ISU61_02700 PF00009 Elongation factor Tu GTP binding domain ISU61_02705 PF01507 Phosphoadenosine phosphosulfate reductase family ISU61_02710 PF10414 Sirohaem synthase dimerisation region ISU61_02710 PF14824 Sirohaem biosynthesis protein central ISU61_02710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU61_02740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU61_02740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU61_02745 PF00175 Oxidoreductase NAD-binding domain ISU61_02745 PF00667 FAD binding domain ISU61_02745 PF00258 Flavodoxin ISU61_02750 PF01242 6-pyruvoyl tetrahydropterin synthase ISU61_02755 PF04055 Radical SAM superfamily ISU61_02760 PF00080 Copper/zinc superoxide dismutase (SODC) ISU61_02765 PF03952 Enolase, N-terminal domain ISU61_02765 PF00113 Enolase, C-terminal TIM barrel domain ISU61_02770 PF06418 CTP synthase N-terminus ISU61_02770 PF00117 Glutamine amidotransferase class-I ISU61_02775 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU61_02780 PF04607 Region found in RelA / SpoT proteins ISU61_02780 PF13291 ACT domain ISU61_02780 PF02824 TGS domain ISU61_02785 PF01938 TRAM domain ISU61_02785 PF05958 tRNA (Uracil-5-)-methyltransferase ISU61_02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_02795 PF00512 His Kinase A (phospho-acceptor) domain ISU61_02795 PF01627 Hpt domain ISU61_02795 PF00072 Response regulator receiver domain ISU61_02795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU61_02795 PF00672 HAMP domain ISU61_02800 PF00595 PDZ domain ISU61_02805 PF13286 Phosphohydrolase-associated domain ISU61_02805 PF01966 HD domain ISU61_02810 PF01048 Phosphorylase superfamily ISU61_02815 PF01497 Periplasmic binding protein ISU61_02820 PF03458 UPF0126 domain ISU61_02825 PF01521 Iron-sulphur cluster biosynthesis ISU61_02830 PF00654 Voltage gated chloride channel ISU61_02835 PF00202 Aminotransferase class-III ISU61_02840 PF01032 FecCD transport family ISU61_02845 PF01497 Periplasmic binding protein ISU61_02850 PF00005 ABC transporter ISU61_02855 PF14814 Bifunctional transglycosylase second domain ISU61_02855 PF00905 Penicillin binding protein transpeptidase domain ISU61_02855 PF00912 Transglycosylase ISU61_02855 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU61_02860 PF04408 Helicase associated domain (HA2) ISU61_02860 PF00271 Helicase conserved C-terminal domain ISU61_02860 PF00270 DEAD/DEAH box helicase ISU61_02860 PF08482 ATP-dependent helicase C-terminal ISU61_02865 PF02834 LigT like Phosphoesterase ISU61_02870 PF17746 SfsA N-terminal OB domain ISU61_02870 PF03749 Sugar fermentation stimulation protein RE domain ISU61_02875 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU61_02880 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU61_02885 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU61_02885 PF01743 Poly A polymerase head domain ISU61_02885 PF12626 Polymerase A arginine-rich C-terminus ISU61_02890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU61_02895 PF02548 Ketopantoate hydroxymethyltransferase ISU61_02900 PF02569 Pantoate-beta-alanine ligase ISU61_02905 PF02261 Aspartate decarboxylase ISU61_02915 PF01061 ABC-2 type transporter ISU61_02920 PF00005 ABC transporter ISU61_02925 PF00484 Carbonic anhydrase ISU61_02930 PF00156 Phosphoribosyl transferase domain ISU61_02935 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU61_02935 PF00394 Multicopper oxidase ISU61_02935 PF07731 Multicopper oxidase ISU61_02935 PF07732 Multicopper oxidase ISU61_02940 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU61_02945 PF17284 Spermidine synthase tetramerisation domain ISU61_02950 PF02675 S-adenosylmethionine decarboxylase ISU61_02955 PF00892 EamA-like transporter family ISU61_02960 PF06062 Uncharacterised protein family (UPF0231) ISU61_02965 PF00330 Aconitase family (aconitate hydratase) ISU61_02965 PF06434 Aconitate hydratase 2 N-terminus ISU61_02965 PF11791 Aconitate B N-terminal domain ISU61_02970 PF01797 Transposase IS200 like ISU61_02975 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_02975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU61_02980 PF00364 Biotin-requiring enzyme ISU61_02980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU61_02980 PF02817 e3 binding domain ISU61_02985 PF00456 Transketolase, thiamine diphosphate binding domain ISU61_02985 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU61_02990 PF07729 FCD domain ISU61_02990 PF00392 Bacterial regulatory proteins, gntR family ISU61_02995 PF00324 Amino acid permease ISU61_03000 PF17113 Regulatory signalling modulator protein AmpE ISU61_03005 PF01510 N-acetylmuramoyl-L-alanine amidase ISU61_03010 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU61_03010 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU61_03015 PF07963 Prokaryotic N-terminal methylation motif ISU61_03020 PF00437 Type II/IV secretion system protein ISU61_03020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU61_03025 PF00482 Type II secretion system (T2SS), protein F ISU61_03030 PF00478 IMP dehydrogenase / GMP reductase domain ISU61_03035 PF01121 Dephospho-CoA kinase ISU61_03040 PF07072 Cell division protein ISU61_03045 PF03884 DNA gyrase inhibitor YacG ISU61_03050 PF01797 Transposase IS200 like ISU61_03055 PF02796 Helix-turn-helix domain of resolvase ISU61_03055 PF00665 Integrase core domain ISU61_03060 PF01695 IstB-like ATP binding protein ISU61_03065 PF01797 Transposase IS200 like ISU61_03075 PF04225 Opacity-associated protein A LysM-like domain ISU61_03075 PF08525 Opacity-associated protein A N-terminal motif ISU61_03080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU61_03080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU61_03085 PF01814 Hemerythrin HHE cation binding domain ISU61_03085 PF04405 Domain of Unknown function (DUF542) ISU61_03090 PF00149 Calcineurin-like phosphoesterase ISU61_03090 PF02872 5'-nucleotidase, C-terminal domain ISU61_03095 PF00459 Inositol monophosphatase family ISU61_03100 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU61_03105 PF06526 Protein of unknown function (DUF1107) ISU61_03110 PF00571 CBS domain ISU61_03110 PF01595 Cyclin M transmembrane N-terminal domain ISU61_03110 PF03471 Transporter associated domain ISU61_03115 PF01625 Peptide methionine sulfoxide reductase ISU61_03120 PF17243 POTRA domain TamA domain 1 ISU61_03120 PF07244 Surface antigen variable number repeat ISU61_03120 PF01103 Surface antigen ISU61_03125 PF04357 TamB, inner membrane protein subunit of TAM complex ISU61_03130 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU61_03135 PF00719 Inorganic pyrophosphatase ISU61_03140 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU61_03145 PF01225 Mur ligase family, catalytic domain ISU61_03145 PF02875 Mur ligase family, glutamate ligase domain ISU61_03145 PF08245 Mur ligase middle domain ISU61_03155 PF01316 Arginine repressor, DNA binding domain ISU61_03155 PF02863 Arginine repressor, C-terminal domain ISU61_03160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU61_03160 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU61_03165 PF13693 Winged helix-turn-helix DNA-binding ISU61_03175 PF00348 Polyprenyl synthetase ISU61_03180 PF00829 Ribosomal prokaryotic L21 protein ISU61_03185 PF01016 Ribosomal L27 protein ISU61_03190 PF00892 EamA-like transporter family ISU61_03195 PF01926 50S ribosome-binding GTPase ISU61_03195 PF01018 GTP1/OBG ISU61_03200 PF00672 HAMP domain ISU61_03200 PF00512 His Kinase A (phospho-acceptor) domain ISU61_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_03205 PF00072 Response regulator receiver domain ISU61_03205 PF00486 Transcriptional regulatory protein, C terminal ISU61_03210 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU61_03215 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU61_03215 PF03449 Transcription elongation factor, N-terminal ISU61_03220 PF01985 CRS1 / YhbY (CRM) domain ISU61_03225 PF01728 FtsJ-like methyltransferase ISU61_03230 PF17862 AAA+ lid domain ISU61_03230 PF01434 Peptidase family M41 ISU61_03230 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_03230 PF06480 FtsH Extracellular ISU61_03235 PF00809 Pterin binding enzyme ISU61_03240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU61_03240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU61_03240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU61_03240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU61_03245 PF03840 Preprotein translocase SecG subunit ISU61_03260 PF02576 RimP N-terminal domain ISU61_03260 PF17384 RimP C-terminal SH3 domain ISU61_03265 PF08529 NusA N-terminal domain ISU61_03265 PF13184 NusA-like KH domain ISU61_03265 PF00575 S1 RNA binding domain ISU61_03270 PF04760 Translation initiation factor IF-2, N-terminal region ISU61_03270 PF11987 Translation-initiation factor 2 ISU61_03270 PF00009 Elongation factor Tu GTP binding domain ISU61_03270 PF03144 Elongation factor Tu domain 2 ISU61_03270 PF08364 Bacterial translation initiation factor IF-2 associated region ISU61_03275 PF02033 Ribosome-binding factor A ISU61_03280 PF09157 Pseudouridine synthase II TruB, C-terminal ISU61_03280 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU61_03280 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU61_03285 PF00312 Ribosomal protein S15 ISU61_03295 PF03725 3' exoribonuclease family, domain 2 ISU61_03295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU61_03295 PF00575 S1 RNA binding domain ISU61_03295 PF00013 KH domain ISU61_03295 PF01138 3' exoribonuclease family, domain 1 ISU61_03300 PF13181 Tetratricopeptide repeat ISU61_03300 PF07719 Tetratricopeptide repeat ISU61_03310 PF00270 DEAD/DEAH box helicase ISU61_03310 PF12343 Cold shock protein DEAD box A ISU61_03310 PF03880 DbpA RNA binding domain ISU61_03310 PF00271 Helicase conserved C-terminal domain ISU61_03320 PF01381 Helix-turn-helix ISU61_03330 PF00296 Luciferase-like monooxygenase ISU61_03335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_03335 PF00529 HlyD membrane-fusion protein of T1SS ISU61_03340 PF00873 AcrB/AcrD/AcrF family ISU61_03345 PF02321 Outer membrane efflux protein ISU61_03345 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU61_03350 PF01136 Peptidase family U32 ISU61_03355 PF01136 Peptidase family U32 ISU61_03360 PF02036 SCP-2 sterol transfer family ISU61_03365 PF13508 Acetyltransferase (GNAT) domain ISU61_03370 PF01541 GIY-YIG catalytic domain ISU61_03385 PF13416 Bacterial extracellular solute-binding protein ISU61_03390 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03395 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03415 PF13460 NAD(P)H-binding ISU61_03420 PF12706 Beta-lactamase superfamily domain ISU61_03430 PF07969 Amidohydrolase family ISU61_03435 PF00005 ABC transporter ISU61_03440 PF00005 ABC transporter ISU61_03445 PF06007 Phosphonate metabolism protein PhnJ ISU61_03450 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU61_03455 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU61_03460 PF06754 Phosphonate metabolism protein PhnG ISU61_03465 PF07702 UTRA domain ISU61_03465 PF00392 Bacterial regulatory proteins, gntR family ISU61_03475 PF03477 ATP cone domain ISU61_03475 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU61_03480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_03480 PF00005 ABC transporter ISU61_03485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_03485 PF00005 ABC transporter ISU61_03490 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU61_03490 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03495 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03505 PF04074 YhcH/YjgK/YiaL ISU61_03510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU61_03510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU61_03515 PF06877 Regulator of ribonuclease activity B ISU61_03520 PF00583 Acetyltransferase (GNAT) family ISU61_03525 PF08264 Anticodon-binding domain of tRNA ISU61_03525 PF00133 tRNA synthetases class I (I, L, M and V) ISU61_03525 PF10458 Valyl tRNA synthetase tRNA binding arm ISU61_03530 PF04364 DNA polymerase III chi subunit, HolC ISU61_03535 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU61_03535 PF00883 Cytosol aminopeptidase family, catalytic domain ISU61_03540 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU61_03545 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU61_03555 PF00589 Phage integrase family ISU61_03555 PF13356 Arm DNA-binding domain ISU61_03565 PF01119 DNA mismatch repair protein, C-terminal domain ISU61_03565 PF08676 MutL C terminal dimerisation domain ISU61_03570 PF01695 IstB-like ATP binding protein ISU61_03575 PF00665 Integrase core domain ISU61_03575 PF02796 Helix-turn-helix domain of resolvase ISU61_03580 PF01797 Transposase IS200 like ISU61_03585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU61_03590 PF13525 Outer membrane lipoprotein ISU61_03595 PF01479 S4 domain ISU61_03595 PF00849 RNA pseudouridylate synthase ISU61_03600 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU61_03605 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_03605 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_03605 PF02861 Clp amino terminal domain, pathogenicity island component ISU61_03605 PF07724 AAA domain (Cdc48 subfamily) ISU61_03605 PF17871 AAA lid domain ISU61_03635 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU61_03640 PF13091 PLD-like domain ISU61_03645 PF13380 CoA binding domain ISU61_03645 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU61_03645 PF00583 Acetyltransferase (GNAT) family ISU61_03650 PF03942 DTW domain ISU61_03655 PF00085 Thioredoxin ISU61_03660 PF00588 SpoU rRNA Methylase family ISU61_03660 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU61_03665 PF07690 Major Facilitator Superfamily ISU61_03670 PF00529 HlyD membrane-fusion protein of T1SS ISU61_03670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_03675 PF01047 MarR family ISU61_03680 PF05437 Branched-chain amino acid transport protein (AzlD) ISU61_03685 PF03591 AzlC protein ISU61_03690 PF07690 Major Facilitator Superfamily ISU61_03700 PF01425 Amidase ISU61_03715 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_03720 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03725 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03730 PF00005 ABC transporter ISU61_03735 PF00266 Aminotransferase class-V ISU61_03740 PF01695 IstB-like ATP binding protein ISU61_03745 PF00665 Integrase core domain ISU61_03745 PF02796 Helix-turn-helix domain of resolvase ISU61_03765 PF08402 TOBE domain ISU61_03765 PF00005 ABC transporter ISU61_03770 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03775 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_03785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU61_03785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU61_03790 PF07702 UTRA domain ISU61_03790 PF00392 Bacterial regulatory proteins, gntR family ISU61_03860 PF05638 Type VI secretion system effector, Hcp ISU61_03900 PF01066 CDP-alcohol phosphatidyltransferase ISU61_03905 PF01541 GIY-YIG catalytic domain ISU61_03905 PF08459 UvrC Helix-hairpin-helix N-terminal ISU61_03905 PF02151 UvrB/uvrC motif ISU61_03910 PF00196 Bacterial regulatory proteins, luxR family ISU61_03910 PF00072 Response regulator receiver domain ISU61_03915 PF10769 Protein of unknown function (DUF2594) ISU61_03920 PF06942 GlpM protein ISU61_03930 PF13505 Outer membrane protein beta-barrel domain ISU61_03940 PF00324 Amino acid permease ISU61_03945 PF01344 Kelch motif ISU61_03950 PF03358 NADPH-dependent FMN reductase ISU61_03955 PF04261 Dyp-type peroxidase family ISU61_03960 PF13473 Cupredoxin-like domain ISU61_03960 PF09375 Imelysin ISU61_03965 PF03239 Iron permease FTR1 family ISU61_03970 PF00474 Sodium:solute symporter family ISU61_03980 PF00171 Aldehyde dehydrogenase family ISU61_03980 PF01619 Proline dehydrogenase ISU61_03980 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU61_03980 PF14850 DNA-binding domain of Proline dehydrogenase ISU61_03995 PF00005 ABC transporter ISU61_04000 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_04005 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_04010 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_04015 PF02899 Phage integrase, N-terminal SAM-like domain ISU61_04020 PF04539 Sigma-70 region 3 ISU61_04020 PF04542 Sigma-70 region 2 ISU61_04020 PF04545 Sigma-70, region 4 ISU61_04025 PF00669 Bacterial flagellin N-terminal helical region ISU61_04025 PF00700 Bacterial flagellin C-terminal helical region ISU61_04025 PF08884 Flagellin D3 domain ISU61_04030 PF07196 Flagellin hook IN motif ISU61_04030 PF07195 Flagellar hook-associated protein 2 C-terminus ISU61_04030 PF02465 Flagellar hook-associated protein 2 N-terminus ISU61_04035 PF02561 Flagellar protein FliS ISU61_04040 PF05400 Flagellar protein FliT ISU61_04045 PF12833 Helix-turn-helix domain ISU61_04050 PF02743 Cache domain ISU61_04050 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU61_04050 PF00672 HAMP domain ISU61_04055 PF01966 HD domain ISU61_04060 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU61_04080 PF02049 Flagellar hook-basal body complex protein FliE ISU61_04085 PF01514 Secretory protein of YscJ/FliF family ISU61_04085 PF08345 Flagellar M-ring protein C-terminal ISU61_04090 PF01706 FliG C-terminal domain ISU61_04090 PF14841 FliG middle domain ISU61_04090 PF14842 FliG N-terminal domain ISU61_04095 PF02108 Flagellar assembly protein FliH ISU61_04100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU61_04100 PF18269 T3SS EscN ATPase C-terminal domain ISU61_04105 PF02050 Flagellar FliJ protein ISU61_04110 PF02120 Flagellar hook-length control protein FliK ISU61_04115 PF03748 Flagellar basal body-associated protein FliL ISU61_04120 PF02154 Flagellar motor switch protein FliM ISU61_04120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU61_04125 PF16973 Flagellar motor switch protein FliN N-terminal ISU61_04125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU61_04130 PF04347 Flagellar biosynthesis protein, FliO ISU61_04135 PF00813 FliP family ISU61_04140 PF01313 Bacterial export proteins, family 3 ISU61_04145 PF01311 Bacterial export proteins, family 1 ISU61_04160 PF00294 pfkB family carbohydrate kinase ISU61_04165 PF02653 Branched-chain amino acid transport system / permease component ISU61_04170 PF00005 ABC transporter ISU61_04175 PF13407 Periplasmic binding protein domain ISU61_04180 PF02653 Branched-chain amino acid transport system / permease component ISU61_04185 PF00596 Class II Aldolase and Adducin N-terminal domain ISU61_04190 PF04198 Putative sugar-binding domain ISU61_04195 PF00669 Bacterial flagellin N-terminal helical region ISU61_04200 PF00460 Flagella basal body rod protein ISU61_04200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_04205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU61_04205 PF10135 Rod binding protein ISU61_04210 PF02119 Flagellar P-ring protein ISU61_04215 PF02107 Flagellar L-ring protein ISU61_04230 PF07559 Flagellar basal body protein FlaE ISU61_04230 PF00460 Flagella basal body rod protein ISU61_04230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_04235 PF13860 FlgD Ig-like domain ISU61_04235 PF03963 Flagellar hook capping protein - N-terminal region ISU61_04235 PF13861 FlgD Tudor-like domain ISU61_04240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_04240 PF00460 Flagella basal body rod protein ISU61_04245 PF00460 Flagella basal body rod protein ISU61_04250 PF17656 FlgA N-terminal domain ISU61_04250 PF13144 Chaperone for flagella basal body P-ring formation ISU61_04255 PF04316 Anti-sigma-28 factor, FlgM ISU61_04260 PF05130 FlgN protein ISU61_04270 PF01797 Transposase IS200 like ISU61_04280 PF06366 Flagellar protein FlhE ISU61_04285 PF00771 FHIPEP family ISU61_04290 PF01312 FlhB HrpN YscU SpaS Family ISU61_04305 PF10709 Protein of unknown function (DUF2511) ISU61_04315 PF04234 CopC domain ISU61_04320 PF00210 Ferritin-like domain ISU61_04325 PF06440 DNA polymerase III, theta subunit ISU61_04330 PF00561 alpha/beta hydrolase fold ISU61_04335 PF00326 Prolyl oligopeptidase family ISU61_04335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU61_04340 PF13995 YebF-like protein ISU61_04345 PF04266 ASCH domain ISU61_04350 PF07130 YebG protein ISU61_04355 PF00271 Helicase conserved C-terminal domain ISU61_04355 PF03880 DbpA RNA binding domain ISU61_04355 PF00270 DEAD/DEAH box helicase ISU61_04360 PF02222 ATP-grasp domain ISU61_04365 PF03701 Uncharacterised protein family (UPF0181) ISU61_04370 PF00425 chorismate binding enzyme ISU61_04370 PF04715 Anthranilate synthase component I, N terminal region ISU61_04375 PF00293 NUDIX domain ISU61_04380 PF03315 Serine dehydratase beta chain ISU61_04380 PF03313 Serine dehydratase alpha chain ISU61_04385 PF01613 Flavin reductase like domain ISU61_04390 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU61_04390 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU61_04400 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU61_04405 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU61_04410 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU61_04415 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU61_04420 PF00171 Aldehyde dehydrogenase family ISU61_04425 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU61_04430 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU61_04435 PF01047 MarR family ISU61_04440 PF03741 Integral membrane protein TerC family ISU61_04440 PF03471 Transporter associated domain ISU61_04445 PF03610 PTS system fructose IIA component ISU61_04445 PF03830 PTS system sorbose subfamily IIB component ISU61_04450 PF03609 PTS system sorbose-specific iic component ISU61_04455 PF03613 PTS system mannose/fructose/sorbose family IID component ISU61_04460 PF06173 Protein of unknown function (DUF986) ISU61_04465 PF02659 Putative manganese efflux pump ISU61_04470 PF00593 TonB dependent receptor ISU61_04470 PF07715 TonB-dependent Receptor Plug Domain ISU61_04475 PF02796 Helix-turn-helix domain of resolvase ISU61_04475 PF00665 Integrase core domain ISU61_04480 PF01695 IstB-like ATP binding protein ISU61_04495 PF00782 Dual specificity phosphatase, catalytic domain ISU61_04500 PF12147 Putative methyltransferase ISU61_04500 PF12146 Serine aminopeptidase, S33 ISU61_04505 PF01553 Acyltransferase ISU61_04515 PF01066 CDP-alcohol phosphatidyltransferase ISU61_04525 PF00589 Phage integrase family ISU61_04555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU61_04555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU61_04565 PF01797 Transposase IS200 like ISU61_04570 PF01406 tRNA synthetases class I (C) catalytic domain ISU61_04570 PF09190 DALR domain ISU61_04575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU61_04580 PF00149 Calcineurin-like phosphoesterase ISU61_04585 PF00731 AIR carboxylase ISU61_04590 PF02222 ATP-grasp domain ISU61_04590 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU61_04600 PF00005 ABC transporter ISU61_04605 PF13472 GDSL-like Lipase/Acylhydrolase family ISU61_04610 PF00106 short chain dehydrogenase ISU61_04615 PF00085 Thioredoxin ISU61_04620 PF01145 SPFH domain / Band 7 family ISU61_04620 PF16200 C-terminal region of band_7 ISU61_04625 PF01957 NfeD-like C-terminal, partner-binding ISU61_04630 PF13411 MerR HTH family regulatory protein ISU61_04635 PF00403 Heavy-metal-associated domain ISU61_04640 PF01963 TraB family ISU61_04645 PF04073 Aminoacyl-tRNA editing domain ISU61_04660 PF07690 Major Facilitator Superfamily ISU61_04665 PF00999 Sodium/hydrogen exchanger family ISU61_04665 PF02254 TrkA-N domain ISU61_04670 PF00294 pfkB family carbohydrate kinase ISU61_04675 PF02706 Chain length determinant protein ISU61_04680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU61_04680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU61_04680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU61_04680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU61_04685 PF00535 Glycosyl transferase family 2 ISU61_04690 PF01050 Mannose-6-phosphate isomerase ISU61_04690 PF00483 Nucleotidyl transferase ISU61_04695 PF01370 NAD dependent epimerase/dehydratase family ISU61_04705 PF00534 Glycosyl transferases group 1 ISU61_04705 PF13439 Glycosyltransferase Family 4 ISU61_04735 PF01370 NAD dependent epimerase/dehydratase family ISU61_04740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU61_04745 PF16363 GDP-mannose 4,6 dehydratase ISU61_04750 PF00483 Nucleotidyl transferase ISU61_04755 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU61_04755 PF00970 Oxidoreductase FAD-binding domain ISU61_04755 PF00175 Oxidoreductase NAD-binding domain ISU61_04760 PF00762 Ferrochelatase ISU61_04765 PF05191 Adenylate kinase, active site lid ISU61_04770 PF00183 Hsp90 protein ISU61_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_04775 PF02132 RecR protein ISU61_04775 PF13662 Toprim domain ISU61_04780 PF02575 YbaB/EbfC DNA-binding family ISU61_04785 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU61_04785 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU61_04785 PF12169 DNA polymerase III subunits gamma and tau domain III ISU61_04790 PF00156 Phosphoribosyl transferase domain ISU61_04795 PF04304 Protein of unknown function (DUF454) ISU61_04805 PF10689 Protein of unknown function (DUF2496) ISU61_04810 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU61_04810 PF00924 Mechanosensitive ion channel ISU61_04810 PF12795 Mechanosensitive ion channel porin domain ISU61_04815 PF02635 DsrE/DsrF-like family ISU61_04820 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU61_04820 PF00440 Bacterial regulatory proteins, tetR family ISU61_04825 PF00529 HlyD membrane-fusion protein of T1SS ISU61_04825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_04830 PF00873 AcrB/AcrD/AcrF family ISU61_04835 PF01197 Ribosomal protein L31 ISU61_04840 PF00444 Ribosomal protein L36 ISU61_04850 PF10757 Biofilm formation regulator YbaJ ISU61_04855 PF05321 Haemolysin expression modulating protein ISU61_04865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU61_04870 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU61_04880 PF00909 Ammonium Transporter Family ISU61_04885 PF00543 Nitrogen regulatory protein P-II ISU61_04890 PF00005 ABC transporter ISU61_04890 PF00664 ABC transporter transmembrane region ISU61_04895 PF00664 ABC transporter transmembrane region ISU61_04895 PF00005 ABC transporter ISU61_04900 PF01037 Lrp/AsnC ligand binding domain ISU61_04900 PF13404 AsnC-type helix-turn-helix domain ISU61_04905 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_04915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_04915 PF12793 Sugar transport-related sRNA regulator N-term ISU61_04920 PF06508 Queuosine biosynthesis protein QueC ISU61_04935 PF13145 PPIC-type PPIASE domain ISU61_04940 PF00216 Bacterial DNA-binding protein ISU61_04945 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU61_04945 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_04945 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU61_04950 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_04950 PF07724 AAA domain (Cdc48 subfamily) ISU61_04950 PF06689 ClpX C4-type zinc finger ISU61_04955 PF00574 Clp protease ISU61_04960 PF05697 Bacterial trigger factor protein (TF) ISU61_04960 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU61_04960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU61_04965 PF01722 BolA-like protein ISU61_04970 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU61_04970 PF03923 Uncharacterized lipoprotein ISU61_04975 PF07690 Major Facilitator Superfamily ISU61_04980 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU61_04985 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU61_04985 PF06481 COX Aromatic Rich Motif ISU61_04990 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU61_04995 PF00510 Cytochrome c oxidase subunit III ISU61_05000 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU61_05005 PF01040 UbiA prenyltransferase family ISU61_05010 PF07690 Major Facilitator Superfamily ISU61_05015 PF04461 Protein of unknown function (DUF520) ISU61_05020 PF02558 Ketopantoate reductase PanE/ApbA ISU61_05020 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU61_05025 PF01965 DJ-1/PfpI family ISU61_05030 PF02568 Thiamine biosynthesis protein (ThiI) ISU61_05030 PF02926 THUMP domain ISU61_05035 PF02609 Exonuclease VII small subunit ISU61_05040 PF00348 Polyprenyl synthetase ISU61_05045 PF02780 Transketolase, C-terminal domain ISU61_05045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU61_05045 PF02779 Transketolase, pyrimidine binding domain ISU61_05050 PF01797 Transposase IS200 like ISU61_05055 PF04608 Phosphatidylglycerophosphatase A ISU61_05060 PF00586 AIR synthase related protein, N-terminal domain ISU61_05060 PF02769 AIR synthase related protein, C-terminal domain ISU61_05065 PF01029 NusB family ISU61_05070 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU61_05075 PF01872 RibD C-terminal domain ISU61_05075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU61_05080 PF03477 ATP cone domain ISU61_05095 PF01797 Transposase IS200 like ISU61_05100 PF02355 Protein export membrane protein ISU61_05100 PF07549 SecD/SecF GG Motif ISU61_05105 PF13721 SecD export protein N-terminal TM region ISU61_05105 PF07549 SecD/SecF GG Motif ISU61_05105 PF02355 Protein export membrane protein ISU61_05110 PF02699 Preprotein translocase subunit ISU61_05115 PF01702 Queuine tRNA-ribosyltransferase ISU61_05120 PF02547 Queuosine biosynthesis protein ISU61_05125 PF04336 Acyl carrier protein phosphodiesterase ISU61_05130 PF00578 AhpC/TSA family ISU61_05130 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU61_05150 PF00128 Alpha amylase, catalytic domain ISU61_05150 PF02903 Alpha amylase, N-terminal ig-like domain ISU61_05155 PF00324 Amino acid permease ISU61_05160 PF05525 Branched-chain amino acid transport protein ISU61_05165 PF12849 PBP superfamily domain ISU61_05170 PF00989 PAS fold ISU61_05170 PF11808 Phosphate regulon sensor protein PhoR ISU61_05170 PF00512 His Kinase A (phospho-acceptor) domain ISU61_05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_05175 PF00072 Response regulator receiver domain ISU61_05175 PF00486 Transcriptional regulatory protein, C terminal ISU61_05180 PF12320 Type 5 capsule protein repressor C-terminal domain ISU61_05180 PF00149 Calcineurin-like phosphoesterase ISU61_05185 PF13476 AAA domain ISU61_05190 PF00480 ROK family ISU61_05195 PF04381 Putative exonuclease, RdgC ISU61_05200 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU61_05205 PF01202 Shikimate kinase ISU61_05215 PF08241 Methyltransferase domain ISU61_05225 PF07238 PilZ domain ISU61_05225 PF07317 Flagellar regulator YcgR ISU61_05230 PF00171 Aldehyde dehydrogenase family ISU61_05235 PF00696 Amino acid kinase family ISU61_05235 PF01472 PUA domain ISU61_05240 PF07417 Sigma factor-binding transcriptional regulator Crl ISU61_05245 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU61_05250 PF00156 Phosphoribosyl transferase domain ISU61_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_05265 PF03466 LysR substrate binding domain ISU61_05270 PF01546 Peptidase family M20/M25/M40 ISU61_05270 PF07687 Peptidase dimerisation domain ISU61_05275 PF11799 impB/mucB/samB family C-terminal domain ISU61_05275 PF00817 impB/mucB/samB family ISU61_05275 PF11798 IMS family HHH motif ISU61_05280 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU61_05290 PF02424 ApbE family ISU61_05295 PF00175 Oxidoreductase NAD-binding domain ISU61_05295 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU61_05295 PF00970 Oxidoreductase FAD-binding domain ISU61_05300 PF02508 Rnf-Nqr subunit, membrane protein ISU61_05305 PF02508 Rnf-Nqr subunit, membrane protein ISU61_05310 PF04205 FMN-binding domain ISU61_05315 PF03116 NQR2, RnfD, RnfE family ISU61_05320 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU61_05320 PF11973 NQRA C-terminal domain ISU61_05325 PF03734 L,D-transpeptidase catalytic domain ISU61_05330 PF13230 Glutamine amidotransferases class-II ISU61_05335 PF13580 SIS domain ISU61_05340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU61_05340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU61_05340 PF09317 Domain of unknown function (DUF1974) ISU61_05350 PF18254 HMW1 domain 2 ISU61_05350 PF18071 HMW1C N-terminal ISU61_05355 PF05860 haemagglutination activity domain ISU61_05360 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU61_05360 PF08479 POTRA domain, ShlB-type ISU61_05370 PF01546 Peptidase family M20/M25/M40 ISU61_05370 PF07687 Peptidase dimerisation domain ISU61_05375 PF00266 Aminotransferase class-V ISU61_05380 PF02796 Helix-turn-helix domain of resolvase ISU61_05380 PF00665 Integrase core domain ISU61_05385 PF01695 IstB-like ATP binding protein ISU61_05400 PF00589 Phage integrase family ISU61_05400 PF13356 Arm DNA-binding domain ISU61_05410 PF12697 Alpha/beta hydrolase family ISU61_05415 PF01402 Ribbon-helix-helix protein, copG family ISU61_05420 PF00258 Flavodoxin ISU61_05425 PF01475 Ferric uptake regulator family ISU61_05430 PF02838 Glycosyl hydrolase family 20, domain 2 ISU61_05430 PF00728 Glycosyl hydrolase family 20, catalytic domain ISU61_05430 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ISU61_05430 PF03173 Putative carbohydrate binding domain ISU61_05435 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ISU61_05435 PF00728 Glycosyl hydrolase family 20, catalytic domain ISU61_05435 PF02838 Glycosyl hydrolase family 20, domain 2 ISU61_05435 PF03173 Putative carbohydrate binding domain ISU61_05440 PF03573 outer membrane porin, OprD family ISU61_05445 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU61_05445 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU61_05450 PF00367 phosphotransferase system, EIIB ISU61_05450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU61_05450 PF02378 Phosphotransferase system, EIIC ISU61_05455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU61_05460 PF01979 Amidohydrolase family ISU61_05465 PF01047 MarR family ISU61_05465 PF00480 ROK family ISU61_05470 PF13344 Haloacid dehalogenase-like hydrolase ISU61_05475 PF13537 Glutamine amidotransferase domain ISU61_05475 PF00733 Asparagine synthase ISU61_05510 PF01494 FAD binding domain ISU61_05515 PF01938 TRAM domain ISU61_05515 PF00919 Uncharacterized protein family UPF0004 ISU61_05515 PF04055 Radical SAM superfamily ISU61_05520 PF02562 PhoH-like protein ISU61_05525 PF02130 Uncharacterized protein family UPF0054 ISU61_05530 PF03471 Transporter associated domain ISU61_05530 PF00571 CBS domain ISU61_05535 PF00795 Carbon-nitrogen hydrolase ISU61_05540 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_05545 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_05550 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_05555 PF00005 ABC transporter ISU61_05560 PF07295 Zinc-ribbon containing domain ISU61_05565 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU61_05565 PF00133 tRNA synthetases class I (I, L, M and V) ISU61_05565 PF08264 Anticodon-binding domain of tRNA ISU61_05570 PF04390 Lipopolysaccharide-assembly ISU61_05575 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU61_05575 PF06144 DNA polymerase III, delta subunit ISU61_05580 PF01467 Cytidylyltransferase-like ISU61_05590 PF02590 Predicted SPOUT methyltransferase ISU61_05595 PF00905 Penicillin binding protein transpeptidase domain ISU61_05595 PF03717 Penicillin-binding Protein dimerisation domain ISU61_05600 PF01098 Cell cycle protein ISU61_05605 PF05036 Sporulation related domain ISU61_05605 PF03330 Lytic transglycolase ISU61_05610 PF07943 Penicillin-binding protein 5, C-terminal domain ISU61_05610 PF00768 D-alanyl-D-alanine carboxypeptidase ISU61_05615 PF04359 Protein of unknown function (DUF493) ISU61_05620 PF03099 Biotin/lipoate A/B protein ligase family ISU61_05625 PF04055 Radical SAM superfamily ISU61_05625 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU61_05630 PF02416 mttA/Hcf106 family ISU61_05635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU61_05640 PF00313 'Cold-shock' DNA-binding domain ISU61_05645 PF00313 'Cold-shock' DNA-binding domain ISU61_05650 PF00196 Bacterial regulatory proteins, luxR family ISU61_05675 PF00664 ABC transporter transmembrane region ISU61_05675 PF00005 ABC transporter ISU61_05685 PF04962 KduI/IolB family ISU61_05690 PF01261 Xylose isomerase-like TIM barrel ISU61_05695 PF00294 pfkB family carbohydrate kinase ISU61_05700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU61_05700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU61_05705 PF02653 Branched-chain amino acid transport system / permease component ISU61_05710 PF00005 ABC transporter ISU61_05715 PF13407 Periplasmic binding protein domain ISU61_05725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU61_05725 PF00205 Thiamine pyrophosphate enzyme, central domain ISU61_05725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU61_05730 PF00171 Aldehyde dehydrogenase family ISU61_05745 PF07703 Alpha-2-macroglobulin bait region domain ISU61_05745 PF00207 Alpha-2-macroglobulin family ISU61_05745 PF01835 MG2 domain ISU61_05745 PF17962 Bacterial macroglobulin domain 6 ISU61_05745 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU61_05745 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU61_05745 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU61_05750 PF00905 Penicillin binding protein transpeptidase domain ISU61_05750 PF06832 Penicillin-Binding Protein C-terminus Family ISU61_05750 PF00912 Transglycosylase ISU61_05755 PF13693 Winged helix-turn-helix DNA-binding ISU61_05775 PF05638 Type VI secretion system effector, Hcp ISU61_05790 PF03212 Pertactin ISU61_05790 PF13018 Extended Signal Peptide of Type V secretion system ISU61_05790 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU61_05790 PF03797 Autotransporter beta-domain ISU61_05805 PF00872 Transposase, Mutator family ISU61_05820 PF14310 Fibronectin type III-like domain ISU61_05820 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU61_05820 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU61_05830 PF00248 Aldo/keto reductase family ISU61_05835 PF00248 Aldo/keto reductase family ISU61_05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_05840 PF03466 LysR substrate binding domain ISU61_05845 PF02796 Helix-turn-helix domain of resolvase ISU61_05845 PF00665 Integrase core domain ISU61_05850 PF01695 IstB-like ATP binding protein ISU61_05860 PF01797 Transposase IS200 like ISU61_05865 PF04957 Ribosome modulation factor ISU61_05870 PF03886 ABC-type transport auxiliary lipoprotein component ISU61_05875 PF02470 MlaD protein ISU61_05880 PF04403 Paraquat-inducible protein A ISU61_05885 PF00005 ABC transporter ISU61_05885 PF16326 ABC transporter C-terminal domain ISU61_05885 PF12848 ABC transporter ISU61_05890 PF01170 Putative RNA methylase family UPF0020 ISU61_05890 PF10672 S-adenosylmethionine-dependent methyltransferase ISU61_05890 PF02926 THUMP domain ISU61_05895 PF03473 MOSC domain ISU61_05895 PF03476 MOSC N-terminal beta barrel domain ISU61_05895 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU61_05900 PF07126 Cell-division protein ZapC ISU61_05905 PF01180 Dihydroorotate dehydrogenase ISU61_05910 PF01433 Peptidase family M1 domain ISU61_05910 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU61_05910 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU61_05915 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU61_05915 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU61_05920 PF00152 tRNA synthetases class II (D, K and N) ISU61_05920 PF01336 OB-fold nucleic acid binding domain ISU61_05925 PF00267 Gram-negative porin ISU61_05930 PF00155 Aminotransferase class I and II ISU61_05940 PF00753 Metallo-beta-lactamase superfamily ISU61_05945 PF05951 Bacterial protein of unknown function (DUF882) ISU61_05950 PF03734 L,D-transpeptidase catalytic domain ISU61_05950 PF01471 Putative peptidoglycan binding domain ISU61_05955 PF01797 Transposase IS200 like ISU61_05960 PF16330 MukB hinge domain ISU61_05960 PF04310 MukB N-terminal ISU61_05965 PF04288 MukE-like family ISU61_05970 PF03882 MukF winged-helix domain ISU61_05970 PF17193 MukF C-terminal domain ISU61_05970 PF17192 MukF middle domain ISU61_05975 PF13847 Methyltransferase domain ISU61_05980 PF01636 Phosphotransferase enzyme family ISU61_05985 PF02348 Cytidylyltransferase ISU61_05990 PF03966 Trm112p-like protein ISU61_05995 PF00313 'Cold-shock' DNA-binding domain ISU61_06000 PF07063 Domain of unknown function (DUF1338) ISU61_06005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU61_06010 PF00005 ABC transporter ISU61_06010 PF00664 ABC transporter transmembrane region ISU61_06015 PF00753 Metallo-beta-lactamase superfamily ISU61_06015 PF03772 Competence protein ISU61_06020 PF00216 Bacterial DNA-binding protein ISU61_06025 PF00575 S1 RNA binding domain ISU61_06030 PF02224 Cytidylate kinase ISU61_06035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU61_06040 PF00266 Aminotransferase class-V ISU61_06050 PF05658 Head domain of trimeric autotransporter adhesin ISU61_06050 PF13018 Extended Signal Peptide of Type V secretion system ISU61_06050 PF03895 YadA-like membrane anchor domain ISU61_06050 PF05658 Head domain of trimeric autotransporter adhesin ISU61_06050 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU61_06050 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU61_06050 PF03895 YadA-like membrane anchor domain ISU61_06050 PF13018 Extended Signal Peptide of Type V secretion system ISU61_06055 PF17763 Glutaminase/Asparaginase C-terminal domain ISU61_06055 PF00710 Asparaginase, N-terminal ISU61_06060 PF18381 YcaO cyclodehydratase C-terminal domain ISU61_06060 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU61_06065 PF01226 Formate/nitrite transporter ISU61_06070 PF01228 Glycine radical ISU61_06070 PF02901 Pyruvate formate lyase-like ISU61_06080 PF04055 Radical SAM superfamily ISU61_06085 PF07690 Major Facilitator Superfamily ISU61_06090 PF02403 Seryl-tRNA synthetase N-terminal domain ISU61_06090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU61_06095 PF16193 AAA C-terminal domain ISU61_06095 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_06095 PF12002 MgsA AAA+ ATPase C terminal ISU61_06100 PF03548 Outer membrane lipoprotein carrier protein LolA ISU61_06105 PF17854 FtsK alpha domain ISU61_06105 PF09397 Ftsk gamma domain ISU61_06105 PF01580 FtsK/SpoIIIE family ISU61_06105 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU61_06110 PF01037 Lrp/AsnC ligand binding domain ISU61_06115 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_06120 PF00664 ABC transporter transmembrane region ISU61_06120 PF00005 ABC transporter ISU61_06125 PF00005 ABC transporter ISU61_06125 PF00664 ABC transporter transmembrane region ISU61_06130 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU61_06135 PF01176 Translation initiation factor 1A / IF-1 ISU61_06140 PF01797 Transposase IS200 like ISU61_06145 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_06145 PF02861 Clp amino terminal domain, pathogenicity island component ISU61_06145 PF17871 AAA lid domain ISU61_06145 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_06145 PF07724 AAA domain (Cdc48 subfamily) ISU61_06150 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU61_06155 PF00313 'Cold-shock' DNA-binding domain ISU61_06160 PF00005 ABC transporter ISU61_06160 PF12704 MacB-like periplasmic core domain ISU61_06160 PF02687 FtsX-like permease family ISU61_06165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_06170 PF04393 Protein of unknown function (DUF535) ISU61_06175 PF11398 Protein of unknown function (DUF2813) ISU61_06180 PF03956 Lysine exporter LysO ISU61_06185 PF03063 Prismane/CO dehydrogenase family ISU61_06190 PF00175 Oxidoreductase NAD-binding domain ISU61_06190 PF00970 Oxidoreductase FAD-binding domain ISU61_06190 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU61_06195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU61_06195 PF00205 Thiamine pyrophosphate enzyme, central domain ISU61_06195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU61_06205 PF01212 Beta-eliminating lyase ISU61_06210 PF13460 NAD(P)H-binding ISU61_06210 PF11066 Protein of unknown function (DUF2867) ISU61_06215 PF01370 NAD dependent epimerase/dehydratase family ISU61_06220 PF12883 Protein of unknown function (DUF3828) ISU61_06225 PF01817 Chorismate mutase type II ISU61_06230 PF00005 ABC transporter ISU61_06235 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_06240 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_06245 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_06255 PF00892 EamA-like transporter family ISU61_06260 PF10100 Staphylopine dehydrogenase ISU61_06265 PF03059 Nicotianamine synthase protein ISU61_06270 PF00005 ABC transporter ISU61_06275 PF01032 FecCD transport family ISU61_06280 PF01032 FecCD transport family ISU61_06305 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_06310 PF05958 tRNA (Uracil-5-)-methyltransferase ISU61_06315 PF10767 Protein of unknown function (DUF2593) ISU61_06320 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_06325 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_06330 PF00005 ABC transporter ISU61_06330 PF08402 TOBE domain ISU61_06335 PF13416 Bacterial extracellular solute-binding protein ISU61_06340 PF10722 Putative bacterial sensory transduction regulator ISU61_06345 PF07214 Protein of unknown function (DUF1418) ISU61_06350 PF00462 Glutaredoxin ISU61_06355 PF06826 Predicted Permease Membrane Region ISU61_06355 PF02080 TrkA-C domain ISU61_06365 PF01569 PAP2 superfamily ISU61_06370 PF01791 DeoC/LacD family aldolase ISU61_06375 PF00455 DeoR C terminal sensor domain ISU61_06375 PF08220 DeoR-like helix-turn-helix domain ISU61_06385 PF00768 D-alanyl-D-alanine carboxypeptidase ISU61_06385 PF07943 Penicillin-binding protein 5, C-terminal domain ISU61_06390 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_06395 PF09383 NIL domain ISU61_06395 PF00005 ABC transporter ISU61_06400 PF03180 NLPA lipoprotein ISU61_06415 PF00043 Glutathione S-transferase, C-terminal domain ISU61_06415 PF13417 Glutathione S-transferase, N-terminal domain ISU61_06420 PF00593 TonB dependent receptor ISU61_06420 PF07715 TonB-dependent Receptor Plug Domain ISU61_06425 PF00005 ABC transporter ISU61_06430 PF01032 FecCD transport family ISU61_06440 PF00324 Amino acid permease ISU61_06445 PF03466 LysR substrate binding domain ISU61_06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_06450 PF03601 Conserved hypothetical protein 698 ISU61_06460 PF02796 Helix-turn-helix domain of resolvase ISU61_06460 PF00665 Integrase core domain ISU61_06465 PF01695 IstB-like ATP binding protein ISU61_06475 PF13954 PapC N-terminal domain ISU61_06475 PF00577 Outer membrane usher protein ISU61_06475 PF13953 PapC C-terminal domain ISU61_06480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_06480 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_06490 PF17550 Family of unknown function ISU61_06495 PF00486 Transcriptional regulatory protein, C terminal ISU61_06500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU61_06500 PF02378 Phosphotransferase system, EIIC ISU61_06505 PF00294 pfkB family carbohydrate kinase ISU61_06510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU61_06510 PF00381 PTS HPr component phosphorylation site ISU61_06515 PF00293 NUDIX domain ISU61_06520 PF02653 Branched-chain amino acid transport system / permease component ISU61_06525 PF00005 ABC transporter ISU61_06535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU61_06540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_06540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_06545 PF00171 Aldehyde dehydrogenase family ISU61_06555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU61_06555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU61_06555 PF01842 ACT domain ISU61_06565 PF03692 Putative zinc- or iron-chelating domain ISU61_06570 PF03222 Tryptophan/tyrosine permease family ISU61_06575 PF08207 Elongation factor P (EF-P) KOW-like domain ISU61_06575 PF01132 Elongation factor P (EF-P) OB domain ISU61_06575 PF09285 Elongation factor P, C-terminal ISU61_06580 PF03786 D-mannonate dehydratase (UxuA) ISU61_06585 PF01232 Mannitol dehydrogenase Rossmann domain ISU61_06585 PF08125 Mannitol dehydrogenase C-terminal domain ISU61_06590 PF00392 Bacterial regulatory proteins, gntR family ISU61_06590 PF07729 FCD domain ISU61_06595 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU61_06595 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU61_06600 PF01569 PAP2 superfamily ISU61_06605 PF00877 NlpC/P60 family ISU61_06610 PF12792 CSS motif domain associated with EAL ISU61_06610 PF00563 EAL domain ISU61_06615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_06620 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_06625 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_06625 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU61_06630 PF00005 ABC transporter ISU61_06630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_06635 PF13989 YejG-like protein ISU61_06640 PF07690 Major Facilitator Superfamily ISU61_06645 PF01479 S4 domain ISU61_06645 PF00849 RNA pseudouridylate synthase ISU61_06650 PF04851 Type III restriction enzyme, res subunit ISU61_06650 PF00271 Helicase conserved C-terminal domain ISU61_06655 PF01386 Ribosomal L25p family ISU61_06660 PF01797 Transposase IS200 like ISU61_06665 PF01389 OmpA-like transmembrane domain ISU61_06665 PF00691 OmpA family ISU61_06670 PF03846 Cell division inhibitor SulA ISU61_06675 PF04993 TfoX N-terminal domain ISU61_06675 PF04994 TfoX C-terminal domain ISU61_06680 PF12805 FUSC-like inner membrane protein yccS ISU61_06685 PF03733 Inner membrane component domain ISU61_06690 PF12462 DNA helicase IV / RNA helicase N terminal ISU61_06690 PF00580 UvrD/REP helicase N-terminal domain ISU61_06690 PF13361 UvrD-like helicase C-terminal domain ISU61_06695 PF02142 MGS-like domain ISU61_06700 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU61_06705 PF13380 CoA binding domain ISU61_06710 PF08755 Hemimethylated DNA-binding protein YccV like ISU61_06715 PF17785 PUA-like domain ISU61_06715 PF10672 S-adenosylmethionine-dependent methyltransferase ISU61_06720 PF00708 Acylphosphatase ISU61_06725 PF04358 DsrC like protein ISU61_06745 PF08031 Berberine and berberine like ISU61_06745 PF01565 FAD binding domain ISU61_06760 PF07977 FabA-like domain ISU61_06765 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU61_06765 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU61_06775 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU61_06775 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU61_06785 PF00378 Enoyl-CoA hydratase/isomerase ISU61_06800 PF00550 Phosphopantetheine attachment site ISU61_06805 PF00698 Acyl transferase domain ISU61_06815 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU61_06840 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_06840 PF07724 AAA domain (Cdc48 subfamily) ISU61_06840 PF17871 AAA lid domain ISU61_06840 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_06845 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU61_06845 PF04717 Type VI secretion system, phage-baseplate injector ISU61_06845 PF13296 Putative type VI secretion system Rhs element Vgr ISU61_06935 PF00005 ABC transporter ISU61_06935 PF12848 ABC transporter ISU61_06945 PF00872 Transposase, Mutator family ISU61_06950 PF00899 ThiF family ISU61_06955 PF03454 MoeA C-terminal region (domain IV) ISU61_06955 PF03453 MoeA N-terminal region (domain I and II) ISU61_06955 PF00994 Probable molybdopterin binding domain ISU61_06965 PF00005 ABC transporter ISU61_06970 PF13533 Biotin-lipoyl like ISU61_06985 PF00756 Putative esterase ISU61_06990 PF00107 Zinc-binding dehydrogenase ISU61_06990 PF08240 Alcohol dehydrogenase GroES-like domain ISU61_06995 PF03466 LysR substrate binding domain ISU61_06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_07000 PF06779 Uncharacterised MFS-type transporter YbfB ISU61_07005 PF01227 GTP cyclohydrolase I ISU61_07010 PF04235 Protein of unknown function (DUF418) ISU61_07015 PF13407 Periplasmic binding protein domain ISU61_07020 PF00005 ABC transporter ISU61_07025 PF02653 Branched-chain amino acid transport system / permease component ISU61_07030 PF02698 DUF218 domain ISU61_07035 PF00390 Malic enzyme, N-terminal domain ISU61_07035 PF03949 Malic enzyme, NAD binding domain ISU61_07040 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU61_07040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU61_07045 PF04172 LrgB-like family ISU61_07050 PF03788 LrgA family ISU61_07055 PF07690 Major Facilitator Superfamily ISU61_07075 PF01797 Transposase IS200 like ISU61_07080 PF01588 Putative tRNA binding domain ISU61_07080 PF09334 tRNA synthetases class I (M) ISU61_07085 PF10609 NUBPL iron-transfer P-loop NTPase ISU61_07090 PF00485 Phosphoribulokinase / Uridine kinase family ISU61_07095 PF00692 dUTPase ISU61_07100 PF05170 AsmA family ISU61_07105 PF00571 CBS domain ISU61_07105 PF03741 Integral membrane protein TerC family ISU61_07105 PF03471 Transporter associated domain ISU61_07110 PF11575 FhuF 2Fe-2S C-terminal domain ISU61_07110 PF06276 Ferric iron reductase FhuF-like transporter ISU61_07115 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU61_07120 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU61_07130 PF04183 IucA / IucC family ISU61_07130 PF06276 Ferric iron reductase FhuF-like transporter ISU61_07135 PF00005 ABC transporter ISU61_07140 PF01032 FecCD transport family ISU61_07145 PF01032 FecCD transport family ISU61_07150 PF01497 Periplasmic binding protein ISU61_07155 PF07715 TonB-dependent Receptor Plug Domain ISU61_07155 PF00593 TonB dependent receptor ISU61_07155 PF07660 Secretin and TonB N terminus short domain ISU61_07160 PF06276 Ferric iron reductase FhuF-like transporter ISU61_07160 PF04183 IucA / IucC family ISU61_07165 PF00483 Nucleotidyl transferase ISU61_07170 PF00483 Nucleotidyl transferase ISU61_07175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU61_07175 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU61_07180 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU61_07180 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU61_07185 PF00977 Histidine biosynthesis protein ISU61_07190 PF00977 Histidine biosynthesis protein ISU61_07195 PF00117 Glutamine amidotransferase class-I ISU61_07200 PF00475 Imidazoleglycerol-phosphate dehydratase ISU61_07205 PF00155 Aminotransferase class I and II ISU61_07210 PF00815 Histidinol dehydrogenase ISU61_07215 PF01634 ATP phosphoribosyltransferase ISU61_07215 PF08029 HisG, C-terminal domain ISU61_07225 PF01370 NAD dependent epimerase/dehydratase family ISU61_07245 PF00005 ABC transporter ISU61_07250 PF00005 ABC transporter ISU61_07255 PF00465 Iron-containing alcohol dehydrogenase ISU61_07260 PF13520 Amino acid permease ISU61_07270 PF00929 Exonuclease ISU61_07270 PF08411 Exonuclease C-terminal ISU61_07280 PF04363 Protein of unknown function (DUF496) ISU61_07295 PF07690 Major Facilitator Superfamily ISU61_07300 PF04134 Protein of unknown function, DUF393 ISU61_07310 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU61_07315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU61_07315 PF13378 Enolase C-terminal domain-like ISU61_07320 PF01070 FMN-dependent dehydrogenase ISU61_07325 PF00764 Arginosuccinate synthase ISU61_07330 PF01554 MatE ISU61_07340 PF01522 Polysaccharide deacetylase ISU61_07350 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU61_07360 PF00196 Bacterial regulatory proteins, luxR family ISU61_07360 PF00072 Response regulator receiver domain ISU61_07365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU61_07375 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU61_07380 PF01648 4'-phosphopantetheinyl transferase superfamily ISU61_07380 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU61_07390 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU61_07390 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU61_07395 PF01306 LacY proton/sugar symporter ISU61_07400 PF00356 Bacterial regulatory proteins, lacI family ISU61_07400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU61_07410 PF06167 Glucose-regulated metallo-peptidase M90 ISU61_07425 PF00664 ABC transporter transmembrane region ISU61_07425 PF00005 ABC transporter ISU61_07435 PF12833 Helix-turn-helix domain ISU61_07440 PF10964 Protein of unknown function (DUF2766) ISU61_07445 PF13996 YobH-like protein ISU61_07450 PF13998 MgrB protein ISU61_07455 PF13974 YebO-like protein ISU61_07470 PF00324 Amino acid permease ISU61_07475 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU61_07480 PF10736 Protein of unknown function (DUF2627) ISU61_07485 PF00313 'Cold-shock' DNA-binding domain ISU61_07490 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU61_07495 PF13847 Methyltransferase domain ISU61_07505 PF08448 PAS fold ISU61_07505 PF08447 PAS fold ISU61_07505 PF05231 MASE1 ISU61_07505 PF00990 Diguanylate cyclase, GGDEF domain ISU61_07505 PF13426 PAS domain ISU61_07505 PF00563 EAL domain ISU61_07510 PF01695 IstB-like ATP binding protein ISU61_07515 PF00665 Integrase core domain ISU61_07515 PF02796 Helix-turn-helix domain of resolvase ISU61_07525 PF05973 Phage derived protein Gp49-like (DUF891) ISU61_07575 PF00589 Phage integrase family ISU61_07575 PF13356 Arm DNA-binding domain ISU61_07580 PF01797 Transposase IS200 like ISU61_07590 PF01668 SmpB protein ISU61_07595 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU61_07600 PF03658 RnfH family Ubiquitin ISU61_07605 PF04355 SmpA / OmlA family ISU61_07610 PF02463 RecF/RecN/SMC N terminal domain ISU61_07615 PF01513 ATP-NAD kinase ISU61_07620 PF01025 GrpE ISU61_07625 PF00285 Citrate synthase, C-terminal domain ISU61_07630 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU61_07635 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU61_07640 PF02910 Fumarate reductase flavoprotein C-term ISU61_07640 PF00890 FAD binding domain ISU61_07645 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU61_07650 PF00676 Dehydrogenase E1 component ISU61_07650 PF16870 2-oxoglutarate dehydrogenase C-terminal ISU61_07650 PF16078 2-oxoglutarate dehydrogenase N-terminus ISU61_07650 PF02779 Transketolase, pyrimidine binding domain ISU61_07655 PF00364 Biotin-requiring enzyme ISU61_07655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU61_07655 PF02817 e3 binding domain ISU61_07660 PF08442 ATP-grasp domain ISU61_07660 PF00549 CoA-ligase ISU61_07665 PF00549 CoA-ligase ISU61_07665 PF02629 CoA binding domain ISU61_07670 PF01654 Cytochrome bd terminal oxidase subunit I ISU61_07675 PF02322 Cytochrome bd terminal oxidase subunit II ISU61_07680 PF08173 Membrane bound YbgT-like protein ISU61_07685 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU61_07690 PF03061 Thioesterase superfamily ISU61_07695 PF01618 MotA/TolQ/ExbB proton channel family ISU61_07700 PF02472 Biopolymer transport protein ExbD/TolR ISU61_07705 PF06519 TolA C-terminal ISU61_07705 PF06519 TolA C-terminal ISU61_07710 PF07676 WD40-like Beta Propeller Repeat ISU61_07710 PF04052 TolB amino-terminal domain ISU61_07715 PF00691 OmpA family ISU61_07720 PF16331 TolA binding protein trimerisation ISU61_07720 PF13174 Tetratricopeptide repeat ISU61_07745 PF02445 Quinolinate synthetase A protein ISU61_07750 PF04973 Nicotinamide mononucleotide transporter ISU61_07755 PF01545 Cation efflux family ISU61_07760 PF00793 DAHP synthetase I family ISU61_07765 PF00300 Histidine phosphatase superfamily (branch 1) ISU61_07775 PF01263 Aldose 1-epimerase ISU61_07785 PF08544 GHMP kinases C terminal ISU61_07785 PF00288 GHMP kinases N terminal domain ISU61_07785 PF10509 Galactokinase galactose-binding signature ISU61_07790 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU61_07790 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU61_07795 PF16363 GDP-mannose 4,6 dehydratase ISU61_07805 PF00005 ABC transporter ISU61_07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_07810 PF03459 TOBE domain ISU61_07815 PF10766 Multidrug efflux pump-associated protein AcrZ ISU61_07825 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_07830 PF00005 ABC transporter ISU61_07830 PF03459 TOBE domain ISU61_07840 PF10282 Lactonase, 7-bladed beta-propeller ISU61_07845 PF00202 Aminotransferase class-III ISU61_07850 PF04055 Radical SAM superfamily ISU61_07850 PF06968 Biotin and Thiamin Synthesis associated domain ISU61_07855 PF00155 Aminotransferase class I and II ISU61_07860 PF08241 Methyltransferase domain ISU61_07870 PF09383 NIL domain ISU61_07870 PF00005 ABC transporter ISU61_07875 PF17757 UvrB interaction domain ISU61_07875 PF04851 Type III restriction enzyme, res subunit ISU61_07875 PF00271 Helicase conserved C-terminal domain ISU61_07875 PF02151 UvrB/uvrC motif ISU61_07875 PF12344 Ultra-violet resistance protein B ISU61_07880 PF09905 DNA-binding protein VF530 ISU61_07890 PF00665 Integrase core domain ISU61_07890 PF02796 Helix-turn-helix domain of resolvase ISU61_07895 PF01695 IstB-like ATP binding protein ISU61_07905 PF06463 Molybdenum Cofactor Synthesis C ISU61_07905 PF04055 Radical SAM superfamily ISU61_07910 PF01967 MoaC family ISU61_07915 PF02597 ThiS family ISU61_07920 PF02391 MoaE protein ISU61_07925 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU61_07930 PF01797 Transposase IS200 like ISU61_07935 PF05199 GMC oxidoreductase ISU61_07935 PF00732 GMC oxidoreductase ISU61_07940 PF00171 Aldehyde dehydrogenase family ISU61_07945 PF00440 Bacterial regulatory proteins, tetR family ISU61_07945 PF13977 BetI-type transcriptional repressor, C-terminal ISU61_07950 PF02028 BCCT, betaine/carnitine/choline family transporter ISU61_07955 PF03466 LysR substrate binding domain ISU61_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_07965 PF01048 Phosphorylase superfamily ISU61_07975 PF01797 Transposase IS200 like ISU61_07985 PF13801 Heavy-metal resistance ISU61_07990 PF00512 His Kinase A (phospho-acceptor) domain ISU61_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_07995 PF02954 Bacterial regulatory protein, Fis family ISU61_07995 PF00158 Sigma-54 interaction domain ISU61_07995 PF00072 Response regulator receiver domain ISU61_08000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU61_08005 PF03466 LysR substrate binding domain ISU61_08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_08030 PF00005 ABC transporter ISU61_08035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_08040 PF09209 Tetracyclin repressor-like, C-terminal domain ISU61_08040 PF00440 Bacterial regulatory proteins, tetR family ISU61_08045 PF00271 Helicase conserved C-terminal domain ISU61_08045 PF00270 DEAD/DEAH box helicase ISU61_08080 PF00872 Transposase, Mutator family ISU61_08095 PF01797 Transposase IS200 like ISU61_08105 PF01207 Dihydrouridine synthase (Dus) ISU61_08115 PF00768 D-alanyl-D-alanine carboxypeptidase ISU61_08120 PF09330 D-lactate dehydrogenase, membrane binding ISU61_08120 PF01565 FAD binding domain ISU61_08125 PF01928 CYTH domain ISU61_08130 PF01844 HNH endonuclease ISU61_08140 PF04226 Transglycosylase associated protein ISU61_08145 PF00005 ABC transporter ISU61_08155 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_08160 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_08165 PF07308 Protein of unknown function (DUF1456) ISU61_08170 PF13188 PAS domain ISU61_08170 PF00158 Sigma-54 interaction domain ISU61_08170 PF02954 Bacterial regulatory protein, Fis family ISU61_08175 PF02653 Branched-chain amino acid transport system / permease component ISU61_08180 PF02653 Branched-chain amino acid transport system / permease component ISU61_08185 PF00005 ABC transporter ISU61_08190 PF00005 ABC transporter ISU61_08205 PF00581 Rhodanese-like domain ISU61_08210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU61_08215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU61_08220 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_08225 PF00005 ABC transporter ISU61_08230 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_08235 PF13520 Amino acid permease ISU61_08240 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU61_08240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU61_08240 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU61_08250 PF00892 EamA-like transporter family ISU61_08255 PF00267 Gram-negative porin ISU61_08260 PF13307 Helicase C-terminal domain ISU61_08260 PF06733 DEAD_2 ISU61_08265 PF00199 Catalase ISU61_08265 PF06628 Catalase-related immune-responsive ISU61_08270 PF07437 YfaZ precursor ISU61_08275 PF03222 Tryptophan/tyrosine permease family ISU61_08280 PF00994 Probable molybdopterin binding domain ISU61_08285 PF03974 Ecotin ISU61_08290 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU61_08295 PF00268 Ribonucleotide reductase, small chain ISU61_08300 PF03477 ATP cone domain ISU61_08300 PF02867 Ribonucleotide reductase, barrel domain ISU61_08300 PF00317 Ribonucleotide reductase, all-alpha domain ISU61_08310 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU61_08310 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU61_08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_08315 PF00072 Response regulator receiver domain ISU61_08315 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU61_08315 PF00512 His Kinase A (phospho-acceptor) domain ISU61_08320 PF00196 Bacterial regulatory proteins, luxR family ISU61_08320 PF00072 Response regulator receiver domain ISU61_08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_08325 PF16359 RcsD-ABL domain ISU61_08325 PF01627 Hpt domain ISU61_08330 PF16359 RcsD-ABL domain ISU61_08330 PF01627 Hpt domain ISU61_08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_08335 PF07690 Major Facilitator Superfamily ISU61_08340 PF00267 Gram-negative porin ISU61_08355 PF00144 Beta-lactamase ISU61_08365 PF12706 Beta-lactamase superfamily domain ISU61_08370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU61_08370 PF00672 HAMP domain ISU61_08370 PF02743 Cache domain ISU61_08375 PF01278 Omptin family ISU61_08380 PF06183 DinI-like family ISU61_08385 PF00717 Peptidase S24-like ISU61_08385 PF01381 Helix-turn-helix ISU61_08390 PF06530 Phage antitermination protein Q ISU61_08395 PF07005 Sugar-binding N-terminal domain ISU61_08395 PF17042 Nucleotide-binding C-terminal domain ISU61_08405 PF00455 DeoR C terminal sensor domain ISU61_08405 PF08220 DeoR-like helix-turn-helix domain ISU61_08410 PF01261 Xylose isomerase-like TIM barrel ISU61_08430 PF04984 Phage tail sheath protein subtilisin-like domain ISU61_08430 PF17482 Phage tail sheath C-terminal domain ISU61_08470 PF04865 Baseplate J-like protein ISU61_08485 PF07484 Phage Tail Collar Domain ISU61_08490 PF01380 SIS domain ISU61_08490 PF01418 Helix-turn-helix domain, rpiR family ISU61_08495 PF00232 Glycosyl hydrolase family 1 ISU61_08500 PF00872 Transposase, Mutator family ISU61_08520 PF05638 Type VI secretion system effector, Hcp ISU61_08535 PF00884 Sulfatase ISU61_08535 PF11893 Domain of unknown function (DUF3413) ISU61_08540 PF07208 Protein of unknown function (DUF1414) ISU61_08545 PF04245 37-kD nucleoid-associated bacterial protein ISU61_08550 PF01797 Transposase IS200 like ISU61_08555 PF17414 MatP C-terminal ribbon-helix-helix domain ISU61_08555 PF06303 MatP N-terminal domain ISU61_08560 PF13654 AAA domain ISU61_08560 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU61_08565 PF07977 FabA-like domain ISU61_08580 PF00665 Integrase core domain ISU61_08580 PF02796 Helix-turn-helix domain of resolvase ISU61_08585 PF01695 IstB-like ATP binding protein ISU61_08620 PF07715 TonB-dependent Receptor Plug Domain ISU61_08620 PF00593 TonB dependent receptor ISU61_08625 PF13193 AMP-binding enzyme C-terminal domain ISU61_08625 PF00501 AMP-binding enzyme ISU61_08630 PF00975 Thioesterase domain ISU61_08640 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU61_08640 PF16197 Ketoacyl-synthetase C-terminal extension ISU61_08640 PF00668 Condensation domain ISU61_08640 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU61_08640 PF00698 Acyl transferase domain ISU61_08640 PF00550 Phosphopantetheine attachment site ISU61_08645 PF00668 Condensation domain ISU61_08645 PF08242 Methyltransferase domain ISU61_08645 PF00501 AMP-binding enzyme ISU61_08645 PF00550 Phosphopantetheine attachment site ISU61_08655 PF00664 ABC transporter transmembrane region ISU61_08655 PF04954 Siderophore-interacting protein ISU61_08655 PF08021 Siderophore-interacting FAD-binding domain ISU61_08655 PF00005 ABC transporter ISU61_08660 PF00664 ABC transporter transmembrane region ISU61_08660 PF00005 ABC transporter ISU61_08665 PF07690 Major Facilitator Superfamily ISU61_08670 PF00425 chorismate binding enzyme ISU61_08675 PF00589 Phage integrase family ISU61_08675 PF13356 Arm DNA-binding domain ISU61_08685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_08685 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_08695 PF13954 PapC N-terminal domain ISU61_08695 PF00577 Outer membrane usher protein ISU61_08695 PF13953 PapC C-terminal domain ISU61_08700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_08700 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_08720 PF00196 Bacterial regulatory proteins, luxR family ISU61_08720 PF00072 Response regulator receiver domain ISU61_08730 PF01575 MaoC like domain ISU61_08735 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU61_08740 PF03466 LysR substrate binding domain ISU61_08740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_08755 PF07690 Major Facilitator Superfamily ISU61_08760 PF04909 Amidohydrolase ISU61_08770 PF02508 Rnf-Nqr subunit, membrane protein ISU61_08775 PF00155 Aminotransferase class I and II ISU61_08780 PF00324 Amino acid permease ISU61_08785 PF08220 DeoR-like helix-turn-helix domain ISU61_08785 PF00455 DeoR C terminal sensor domain ISU61_08795 PF04960 Glutaminase ISU61_08810 PF03239 Iron permease FTR1 family ISU61_08815 PF10634 Fe2+ transport protein ISU61_08825 PF00005 ABC transporter ISU61_08825 PF12704 MacB-like periplasmic core domain ISU61_08825 PF02687 FtsX-like permease family ISU61_08835 PF02687 FtsX-like permease family ISU61_08835 PF12704 MacB-like periplasmic core domain ISU61_08835 PF00005 ABC transporter ISU61_08840 PF00578 AhpC/TSA family ISU61_08850 PF09313 Domain of unknown function (DUF1971) ISU61_08850 PF03848 Tellurite resistance protein TehB ISU61_08855 PF00557 Metallopeptidase family M24 ISU61_08865 PF01522 Polysaccharide deacetylase ISU61_08865 PF14883 Hypothetical glycosyl hydrolase family 13 ISU61_08870 PF00535 Glycosyl transferase family 2 ISU61_08875 PF13994 PgaD-like protein ISU61_08895 PF01699 Sodium/calcium exchanger protein ISU61_08900 PF00672 HAMP domain ISU61_08900 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU61_08900 PF07730 Histidine kinase ISU61_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_08910 PF00155 Aminotransferase class I and II ISU61_08910 PF00392 Bacterial regulatory proteins, gntR family ISU61_08915 PF00202 Aminotransferase class-III ISU61_08920 PF04958 Arginine N-succinyltransferase beta subunit ISU61_08925 PF00171 Aldehyde dehydrogenase family ISU61_08930 PF04996 Succinylarginine dihydrolase ISU61_08935 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU61_08940 PF00267 Gram-negative porin ISU61_08950 PF01979 Amidohydrolase family ISU61_08960 PF01695 IstB-like ATP binding protein ISU61_08965 PF02796 Helix-turn-helix domain of resolvase ISU61_08965 PF00665 Integrase core domain ISU61_08975 PF07351 Protein of unknown function (DUF1480) ISU61_08990 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_08990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_09010 PF02470 MlaD protein ISU61_09015 PF04403 Paraquat-inducible protein A ISU61_09020 PF13185 GAF domain ISU61_09025 PF04352 ProQ/FINO family ISU61_09025 PF17516 ProQ C-terminal domain ISU61_09030 PF03572 Peptidase family S41 ISU61_09030 PF17804 Tail specific protease N-terminal domain ISU61_09030 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU61_09030 PF00595 PDZ domain ISU61_09035 PF01435 Peptidase family M48 ISU61_09040 PF00419 Fimbrial protein ISU61_09045 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_09045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_09050 PF13953 PapC C-terminal domain ISU61_09050 PF00577 Outer membrane usher protein ISU61_09050 PF13954 PapC N-terminal domain ISU61_09060 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_09060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_09065 PF07690 Major Facilitator Superfamily ISU61_09070 PF14583 Oligogalacturonate lyase ISU61_09075 PF09339 IclR helix-turn-helix domain ISU61_09075 PF01614 Bacterial transcriptional regulator ISU61_09080 PF01510 N-acetylmuramoyl-L-alanine amidase ISU61_09085 PF00375 Sodium:dicarboxylate symporter family ISU61_09090 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU61_09095 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU61_09100 PF01547 Bacterial extracellular solute-binding protein ISU61_09105 PF17912 MalK OB fold domain ISU61_09105 PF00005 ABC transporter ISU61_09105 PF03459 TOBE domain ISU61_09110 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_09115 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_09120 PF06917 Periplasmic pectate lyase ISU61_09130 PF04962 KduI/IolB family ISU61_09135 PF07883 Cupin domain ISU61_09140 PF00872 Transposase, Mutator family ISU61_09150 PF08274 PhnA Zinc-Ribbon ISU61_09150 PF03831 PhnA domain ISU61_09160 PF04011 LemA family ISU61_09175 PF00005 ABC transporter ISU61_09180 PF03379 CcmB protein ISU61_09185 PF01578 Cytochrome C assembly protein ISU61_09190 PF04995 Heme exporter protein D (CcmD) ISU61_09195 PF03100 CcmE ISU61_09200 PF01578 Cytochrome C assembly protein ISU61_09200 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU61_09205 PF08534 Redoxin ISU61_09210 PF03918 Cytochrome C biogenesis protein ISU61_09215 PF03918 Cytochrome C biogenesis protein ISU61_09220 PF04333 MlaA lipoprotein ISU61_09225 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU61_09230 PF04175 Protein of unknown function (DUF406) ISU61_09235 PF00108 Thiolase, N-terminal domain ISU61_09235 PF02803 Thiolase, C-terminal domain ISU61_09240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU61_09240 PF00378 Enoyl-CoA hydratase/isomerase ISU61_09240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU61_09245 PF00300 Histidine phosphatase superfamily (branch 1) ISU61_09250 PF01713 Smr domain ISU61_09255 PF05175 Methyltransferase small domain ISU61_09260 PF01264 Chorismate synthase ISU61_09265 PF03411 Penicillin-insensitive murein endopeptidase ISU61_09270 PF01925 Sulfite exporter TauE/SafE ISU61_09275 PF04315 Elongation factor P hydroxylase ISU61_09280 PF08891 YfcL protein ISU61_09285 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU61_09285 PF01266 FAD dependent oxidoreductase ISU61_09290 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU61_09290 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU61_09295 PF01177 Asp/Glu/Hydantoin racemase ISU61_09300 PF00419 Fimbrial protein ISU61_09310 PF00892 EamA-like transporter family ISU61_09320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU61_09320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU61_09320 PF11890 Domain of unknown function (DUF3410) ISU61_09325 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU61_09325 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU61_09330 PF01416 tRNA pseudouridine synthase ISU61_09335 PF09335 SNARE associated Golgi protein ISU61_09340 PF01039 Carboxyl transferase domain ISU61_09340 PF17848 Acetyl-coA carboxylase zinc finger domain ISU61_09345 PF02875 Mur ligase family, glutamate ligase domain ISU61_09345 PF08245 Mur ligase middle domain ISU61_09350 PF05036 Sporulation related domain ISU61_09355 PF02674 Colicin V production protein ISU61_09360 PF00156 Phosphoribosyl transferase domain ISU61_09365 PF02441 Flavoprotein ISU61_09370 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_09375 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_09380 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_09385 PF00005 ABC transporter ISU61_09390 PF08338 Domain of unknown function (DUF1731) ISU61_09390 PF01370 NAD dependent epimerase/dehydratase family ISU61_09400 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU61_09405 PF00293 NUDIX domain ISU61_09415 PF00872 Transposase, Mutator family ISU61_09430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU61_09435 PF00356 Bacterial regulatory proteins, lacI family ISU61_09435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU61_09440 PF07085 DRTGG domain ISU61_09440 PF01515 Phosphate acetyl/butaryl transferase ISU61_09445 PF00871 Acetokinase family ISU61_09450 PF04217 Protein of unknown function, DUF412 ISU61_09455 PF03887 YfbU domain ISU61_09460 PF13419 Haloacid dehalogenase-like hydrolase ISU61_09465 PF02080 TrkA-C domain ISU61_09465 PF03600 Citrate transporter ISU61_09480 PF00155 Aminotransferase class I and II ISU61_09485 PF03466 LysR substrate binding domain ISU61_09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_09490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU61_09495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU61_09500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU61_09500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU61_09510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU61_09510 PF10531 SLBB domain ISU61_09510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU61_09515 PF01568 Molydopterin dinucleotide binding domain ISU61_09515 PF00384 Molybdopterin oxidoreductase ISU61_09515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU61_09515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU61_09520 PF00146 NADH dehydrogenase ISU61_09525 PF12838 4Fe-4S dicluster domain ISU61_09530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU61_09535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU61_09540 PF00361 Proton-conducting membrane transporter ISU61_09540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU61_09545 PF00361 Proton-conducting membrane transporter ISU61_09550 PF00361 Proton-conducting membrane transporter ISU61_09560 PF04074 YhcH/YjgK/YiaL ISU61_09565 PF01202 Shikimate kinase ISU61_09570 PF00106 short chain dehydrogenase ISU61_09575 PF02638 Glycosyl hydrolase-like 10 ISU61_09580 PF00356 Bacterial regulatory proteins, lacI family ISU61_09585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU61_09585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU61_09590 PF07690 Major Facilitator Superfamily ISU61_09600 PF00920 Dehydratase family ISU61_09605 PF05957 Bacterial protein of unknown function (DUF883) ISU61_09615 PF00425 chorismate binding enzyme ISU61_09620 PF16582 Middle domain of thiamine pyrophosphate ISU61_09620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU61_09620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU61_09625 PF12697 Alpha/beta hydrolase family ISU61_09630 PF00378 Enoyl-CoA hydratase/isomerase ISU61_09635 PF13378 Enolase C-terminal domain-like ISU61_09640 PF00501 AMP-binding enzyme ISU61_09640 PF13193 AMP-binding enzyme C-terminal domain ISU61_09645 PF02885 Glycosyl transferase family, helical bundle domain ISU61_09650 PF07338 Protein of unknown function (DUF1471) ISU61_09655 PF05971 RNA methyltransferase ISU61_09665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU61_09665 PF08447 PAS fold ISU61_09665 PF13426 PAS domain ISU61_09670 PF00005 ABC transporter ISU61_09675 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_09680 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_09690 PF00210 Ferritin-like domain ISU61_09695 PF13649 Methyltransferase domain ISU61_09705 PF00892 EamA-like transporter family ISU61_09710 PF13505 Outer membrane protein beta-barrel domain ISU61_09730 PF08240 Alcohol dehydrogenase GroES-like domain ISU61_09730 PF00107 Zinc-binding dehydrogenase ISU61_09735 PF13407 Periplasmic binding protein domain ISU61_09740 PF00005 ABC transporter ISU61_09745 PF02653 Branched-chain amino acid transport system / permease component ISU61_09750 PF00356 Bacterial regulatory proteins, lacI family ISU61_09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_09755 PF03466 LysR substrate binding domain ISU61_09760 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU61_09770 PF02028 BCCT, betaine/carnitine/choline family transporter ISU61_09775 PF00355 Rieske [2Fe-2S] domain ISU61_09775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ISU61_09780 PF00970 Oxidoreductase FAD-binding domain ISU61_09780 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU61_09780 PF00175 Oxidoreductase NAD-binding domain ISU61_09785 PF08479 POTRA domain, ShlB-type ISU61_09785 PF17287 POTRA domain ISU61_09785 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU61_09790 PF04829 Pre-toxin domain with VENN motif ISU61_09790 PF05860 haemagglutination activity domain ISU61_09790 PF13018 Extended Signal Peptide of Type V secretion system ISU61_09790 PF13332 Hemagglutinin repeat ISU61_09810 PF13332 Hemagglutinin repeat ISU61_09810 PF04829 Pre-toxin domain with VENN motif ISU61_09810 PF15526 Novel toxin 21 ISU61_09810 PF05860 haemagglutination activity domain ISU61_09810 PF05594 Haemagluttinin repeat ISU61_09820 PF00005 ABC transporter ISU61_09820 PF17912 MalK OB fold domain ISU61_09825 PF01797 Transposase IS200 like ISU61_09830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU61_09830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU61_09830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU61_09830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU61_09835 PF00356 Bacterial regulatory proteins, lacI family ISU61_09845 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_09850 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_09855 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU61_09880 PF00924 Mechanosensitive ion channel ISU61_09885 PF01867 CRISPR associated protein Cas1 ISU61_09895 PF09611 CRISPR-associated protein (Cas_Csy1) ISU61_09900 PF09614 CRISPR-associated protein (Cas_Csy2) ISU61_09905 PF09615 CRISPR-associated protein (Cas_Csy3) ISU61_09910 PF09618 CRISPR-associated protein (Cas_Csy4) ISU61_09915 PF00248 Aldo/keto reductase family ISU61_09925 PF00083 Sugar (and other) transporter ISU61_09940 PF01695 IstB-like ATP binding protein ISU61_09945 PF02796 Helix-turn-helix domain of resolvase ISU61_09945 PF00665 Integrase core domain ISU61_09955 PF03472 Autoinducer binding domain ISU61_09955 PF00196 Bacterial regulatory proteins, luxR family ISU61_09960 PF00765 Autoinducer synthase ISU61_09975 PF17773 UPF0176 acylphosphatase like domain ISU61_09975 PF12368 Rhodanase C-terminal ISU61_09975 PF00581 Rhodanese-like domain ISU61_09980 PF01594 AI-2E family transporter ISU61_09990 PF00196 Bacterial regulatory proteins, luxR family ISU61_09995 PF01266 FAD dependent oxidoreductase ISU61_10000 PF00872 Transposase, Mutator family ISU61_10005 PF13991 BssS protein family ISU61_10010 PF06183 DinI-like family ISU61_10015 PF01979 Amidohydrolase family ISU61_10020 PF03992 Antibiotic biosynthesis monooxygenase ISU61_10030 PF00575 S1 RNA binding domain ISU61_10030 PF10150 Ribonuclease E/G family ISU61_10030 PF12111 Polyribonucleotide phosphorylase C terminal ISU61_10035 PF01479 S4 domain ISU61_10035 PF00849 RNA pseudouridylate synthase ISU61_10040 PF02545 Maf-like protein ISU61_10045 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU61_10050 PF01783 Ribosomal L32p protein family ISU61_10055 PF02504 Fatty acid synthesis protein ISU61_10060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU61_10060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU61_10065 PF00698 Acyl transferase domain ISU61_10075 PF00550 Phosphopantetheine attachment site ISU61_10080 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU61_10080 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU61_10085 PF01797 Transposase IS200 like ISU61_10090 PF01063 Amino-transferase class IV ISU61_10095 PF02618 YceG-like family ISU61_10100 PF02223 Thymidylate kinase ISU61_10105 PF09115 DNA polymerase III, delta subunit, C terminal ISU61_10110 PF01026 TatD related DNase ISU61_10115 PF00367 phosphotransferase system, EIIB ISU61_10115 PF02378 Phosphotransferase system, EIIC ISU61_10120 PF01797 Transposase IS200 like ISU61_10125 PF08501 Shikimate dehydrogenase substrate binding domain ISU61_10130 PF01230 HIT domain ISU61_10135 PF07233 Protein of unknown function (DUF1425) ISU61_10140 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU61_10140 PF13036 Peptidoglycan-synthase activator LpoB ISU61_10145 PF01636 Phosphotransferase enzyme family ISU61_10150 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU61_10155 PF05728 Uncharacterised protein family (UPF0227) ISU61_10160 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_10175 PF00872 Transposase, Mutator family ISU61_10180 PF05433 Glycine zipper 2TM domain ISU61_10185 PF17757 UvrB interaction domain ISU61_10185 PF02559 CarD-like/TRCF domain ISU61_10185 PF00270 DEAD/DEAH box helicase ISU61_10185 PF00271 Helicase conserved C-terminal domain ISU61_10185 PF03461 TRCF domain ISU61_10190 PF12704 MacB-like periplasmic core domain ISU61_10190 PF02687 FtsX-like permease family ISU61_10195 PF00005 ABC transporter ISU61_10200 PF02687 FtsX-like permease family ISU61_10200 PF12704 MacB-like periplasmic core domain ISU61_10205 PF00480 ROK family ISU61_10210 PF00480 ROK family ISU61_10215 PF02146 Sir2 family ISU61_10220 PF07687 Peptidase dimerisation domain ISU61_10220 PF01546 Peptidase family M20/M25/M40 ISU61_10230 PF08007 Cupin superfamily protein ISU61_10235 PF08918 PhoQ Sensor ISU61_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_10240 PF00486 Transcriptional regulatory protein, C terminal ISU61_10240 PF00072 Response regulator receiver domain ISU61_10250 PF00206 Lyase ISU61_10250 PF08328 Adenylosuccinate lyase C-terminal ISU61_10255 PF04356 Protein of unknown function (DUF489) ISU61_10265 PF00293 NUDIX domain ISU61_10270 PF00849 RNA pseudouridylate synthase ISU61_10275 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU61_10280 PF00356 Bacterial regulatory proteins, lacI family ISU61_10280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU61_10290 PF08447 PAS fold ISU61_10290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU61_10295 PF05368 NmrA-like family ISU61_10300 PF01638 HxlR-like helix-turn-helix ISU61_10310 PF00328 Histidine phosphatase superfamily (branch 2) ISU61_10315 PF14001 YdfZ protein ISU61_10325 PF01037 Lrp/AsnC ligand binding domain ISU61_10325 PF13404 AsnC-type helix-turn-helix domain ISU61_10330 PF10777 Inner membrane protein YlaC ISU61_10335 PF16197 Ketoacyl-synthetase C-terminal extension ISU61_10335 PF14765 Polyketide synthase dehydratase ISU61_10335 PF00550 Phosphopantetheine attachment site ISU61_10335 PF08659 KR domain ISU61_10335 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU61_10335 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU61_10335 PF00107 Zinc-binding dehydrogenase ISU61_10335 PF00698 Acyl transferase domain ISU61_10335 PF08240 Alcohol dehydrogenase GroES-like domain ISU61_10340 PF00703 Glycosyl hydrolases family 2 ISU61_10340 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU61_10340 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU61_10340 PF16353 Domain of unknown function(DUF4981) ISU61_10340 PF02929 Beta galactosidase small chain ISU61_10345 PF00313 'Cold-shock' DNA-binding domain ISU61_10350 PF10781 Dextransucrase DSRB ISU61_10360 PF02308 MgtC family ISU61_10365 PF00689 Cation transporting ATPase, C-terminus ISU61_10365 PF00690 Cation transporter/ATPase, N-terminus ISU61_10375 PF05280 Flagellar transcriptional activator (FlhC) ISU61_10380 PF01618 MotA/TolQ/ExbB proton channel family ISU61_10385 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU61_10385 PF00691 OmpA family ISU61_10390 PF01584 CheW-like domain ISU61_10390 PF02895 Signal transducing histidine kinase, homodimeric domain ISU61_10390 PF01627 Hpt domain ISU61_10390 PF09078 CheY binding ISU61_10390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_10395 PF01584 CheW-like domain ISU61_10400 PF07690 Major Facilitator Superfamily ISU61_10405 PF01042 Endoribonuclease L-PSP ISU61_10415 PF08348 YheO-like PAS domain ISU61_10415 PF13309 HTH domain ISU61_10420 PF12951 Passenger-associated-transport-repeat ISU61_10435 PF02203 Tar ligand binding domain homologue ISU61_10435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU61_10435 PF00672 HAMP domain ISU61_10440 PF02203 Tar ligand binding domain homologue ISU61_10440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU61_10440 PF00672 HAMP domain ISU61_10445 PF01739 CheR methyltransferase, SAM binding domain ISU61_10445 PF03705 CheR methyltransferase, all-alpha domain ISU61_10450 PF01339 CheB methylesterase ISU61_10450 PF00072 Response regulator receiver domain ISU61_10455 PF00072 Response regulator receiver domain ISU61_10460 PF04344 Chemotaxis phosphatase, CheZ ISU61_10465 PF01510 N-acetylmuramoyl-L-alanine amidase ISU61_10470 PF13018 Extended Signal Peptide of Type V secretion system ISU61_10470 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU61_10470 PF03895 YadA-like membrane anchor domain ISU61_10470 PF05658 Head domain of trimeric autotransporter adhesin ISU61_10475 PF05658 Head domain of trimeric autotransporter adhesin ISU61_10475 PF03895 YadA-like membrane anchor domain ISU61_10475 PF13018 Extended Signal Peptide of Type V secretion system ISU61_10475 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU61_10485 PF00872 Transposase, Mutator family ISU61_10490 PF00842 Alanine racemase, C-terminal domain ISU61_10490 PF01168 Alanine racemase, N-terminal domain ISU61_10515 PF01695 IstB-like ATP binding protein ISU61_10520 PF02796 Helix-turn-helix domain of resolvase ISU61_10520 PF00665 Integrase core domain ISU61_10530 PF01979 Amidohydrolase family ISU61_10535 PF05962 HutD ISU61_10545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU61_10545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU61_10550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU61_10550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU61_10555 PF01370 NAD dependent epimerase/dehydratase family ISU61_10595 PF00872 Transposase, Mutator family ISU61_10615 PF08242 Methyltransferase domain ISU61_10660 PF00672 HAMP domain ISU61_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_10660 PF00512 His Kinase A (phospho-acceptor) domain ISU61_10665 PF00486 Transcriptional regulatory protein, C terminal ISU61_10665 PF00072 Response regulator receiver domain ISU61_10670 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU61_10710 PF01926 50S ribosome-binding GTPase ISU61_10710 PF06071 Protein of unknown function (DUF933) ISU61_10715 PF01195 Peptidyl-tRNA hydrolase ISU61_10720 PF10762 Protein of unknown function (DUF2583) ISU61_10725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU61_10725 PF14572 Phosphoribosyl synthetase-associated domain ISU61_10730 PF08544 GHMP kinases C terminal ISU61_10730 PF00288 GHMP kinases N terminal domain ISU61_10735 PF03550 Outer membrane lipoprotein LolB ISU61_10740 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU61_10740 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU61_10740 PF01488 Shikimate / quinate 5-dehydrogenase ISU61_10745 PF00472 RF-1 domain ISU61_10745 PF03462 PCRF domain ISU61_10750 PF17827 PrmC N-terminal domain ISU61_10750 PF13847 Methyltransferase domain ISU61_10755 PF04247 Invasion gene expression up-regulator, SirB ISU61_10760 PF13369 Transglutaminase-like superfamily ISU61_10765 PF00793 DAHP synthetase I family ISU61_10770 PF01740 STAS domain ISU61_10770 PF00916 Sulfate permease family ISU61_10780 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU61_10790 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_10795 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_10800 PF00005 ABC transporter ISU61_10800 PF08402 TOBE domain ISU61_10805 PF01797 Transposase IS200 like ISU61_10815 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU61_10820 PF00480 ROK family ISU61_10820 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU61_10830 PF02811 PHP domain ISU61_10835 PF02613 Nitrate reductase delta subunit ISU61_10840 PF07273 Protein of unknown function (DUF1439) ISU61_10845 PF07690 Major Facilitator Superfamily ISU61_10850 PF13302 Acetyltransferase (GNAT) domain ISU61_10855 PF04337 Protein of unknown function, DUF480 ISU61_10860 PF03023 Lipid II flippase MurJ ISU61_10865 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU61_10865 PF17287 POTRA domain ISU61_10865 PF08479 POTRA domain, ShlB-type ISU61_10875 PF00750 tRNA synthetases class I (R) ISU61_10875 PF03485 Arginyl tRNA synthetase N terminal domain ISU61_10875 PF05746 DALR anticodon binding domain ISU61_10880 PF06185 YecM protein ISU61_10885 PF03932 CutC family ISU61_10890 PF08003 Protein of unknown function (DUF1698) ISU61_10895 PF13649 Methyltransferase domain ISU61_10900 PF01124 MAPEG family ISU61_10905 PF01904 Protein of unknown function DUF72 ISU61_10910 PF00872 Transposase, Mutator family ISU61_10915 PF02938 GAD domain ISU61_10915 PF01336 OB-fold nucleic acid binding domain ISU61_10915 PF00152 tRNA synthetases class II (D, K and N) ISU61_10920 PF00293 NUDIX domain ISU61_10925 PF01709 Transcriptional regulator ISU61_10930 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU61_10935 PF07499 RuvA, C-terminal domain ISU61_10935 PF01330 RuvA N terminal domain ISU61_10940 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU61_10940 PF05491 RuvB C-terminal winged helix domain ISU61_10940 PF17864 RuvB AAA lid domain ISU61_10945 PF00950 ABC 3 transport family ISU61_10950 PF00005 ABC transporter ISU61_10955 PF01297 Zinc-uptake complex component A periplasmic ISU61_10960 PF08525 Opacity-associated protein A N-terminal motif ISU61_10960 PF01551 Peptidase family M23 ISU61_10960 PF01476 LysM domain ISU61_10965 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU61_10975 PF02887 Pyruvate kinase, alpha/beta domain ISU61_10975 PF00224 Pyruvate kinase, barrel domain ISU61_10980 PF01380 SIS domain ISU61_10980 PF01418 Helix-turn-helix domain, rpiR family ISU61_10985 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU61_10985 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU61_10990 PF01081 KDPG and KHG aldolase ISU61_10995 PF00893 Small Multidrug Resistance protein ISU61_11000 PF00893 Small Multidrug Resistance protein ISU61_11005 PF01042 Endoribonuclease L-PSP ISU61_11010 PF13307 Helicase C-terminal domain ISU61_11010 PF04851 Type III restriction enzyme, res subunit ISU61_11015 PF00814 Glycoprotease family ISU61_11020 PF03843 Outer membrane lipoprotein Slp family ISU61_11030 PF13193 AMP-binding enzyme C-terminal domain ISU61_11030 PF00501 AMP-binding enzyme ISU61_11035 PF01612 3'-5' exonuclease ISU61_11035 PF00570 HRDC domain ISU61_11040 PF03776 Septum formation topological specificity factor MinE ISU61_11045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU61_11050 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU61_11050 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU61_11055 PF05166 YcgL domain ISU61_11060 PF13406 Transglycosylase SLT domain ISU61_11065 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU61_11070 PF03692 Putative zinc- or iron-chelating domain ISU61_11075 PF00589 Phage integrase family ISU61_11075 PF12167 Arm DNA-binding domain ISU61_11080 PF02796 Helix-turn-helix domain of resolvase ISU61_11080 PF00665 Integrase core domain ISU61_11085 PF01695 IstB-like ATP binding protein ISU61_11100 PF05772 NinB protein ISU61_11110 PF06530 Phage antitermination protein Q ISU61_11135 PF00872 Transposase, Mutator family ISU61_11145 PF00266 Aminotransferase class-V ISU61_11160 PF02600 Disulfide bond formation protein DsbB ISU61_11165 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ISU61_11170 PF00392 Bacterial regulatory proteins, gntR family ISU61_11170 PF07840 FadR C-terminal domain ISU61_11175 PF04293 SpoVR like protein ISU61_11180 PF01266 FAD dependent oxidoreductase ISU61_11185 PF07690 Major Facilitator Superfamily ISU61_11190 PF05726 Pirin C-terminal cupin domain ISU61_11190 PF02678 Pirin ISU61_11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_11195 PF03466 LysR substrate binding domain ISU61_11205 PF04285 Protein of unknown function (DUF444) ISU61_11210 PF06798 PrkA serine protein kinase C-terminal domain ISU61_11210 PF08298 PrkA AAA domain ISU61_11215 PF06629 MltA-interacting protein MipA ISU61_11220 PF01263 Aldose 1-epimerase ISU61_11225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU61_11225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU61_11230 PF01641 SelR domain ISU61_11235 PF07023 Protein of unknown function (DUF1315) ISU61_11240 PF00857 Isochorismatase family ISU61_11245 PF17763 Glutaminase/Asparaginase C-terminal domain ISU61_11245 PF00710 Asparaginase, N-terminal ISU61_11250 PF01343 Peptidase family S49 ISU61_11255 PF00881 Nitroreductase family ISU61_11260 PF02769 AIR synthase related protein, C-terminal domain ISU61_11260 PF00586 AIR synthase related protein, N-terminal domain ISU61_11265 PF01751 Toprim domain ISU61_11265 PF01131 DNA topoisomerase ISU61_11270 PF07383 Protein of unknown function (DUF1496) ISU61_11275 PF00293 NUDIX domain ISU61_11280 PF03372 Endonuclease/Exonuclease/phosphatase family ISU61_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_11285 PF03466 LysR substrate binding domain ISU61_11305 PF01842 ACT domain ISU61_11305 PF00551 Formyl transferase ISU61_11310 PF02810 SEC-C motif ISU61_11315 PF00072 Response regulator receiver domain ISU61_11320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU61_11320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU61_11320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU61_11325 PF00816 H-NS histone family ISU61_11330 PF00265 Thymidine kinase ISU61_11335 PF00171 Aldehyde dehydrogenase family ISU61_11335 PF00465 Iron-containing alcohol dehydrogenase ISU61_11340 PF01914 MarC family integral membrane protein ISU61_11345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_11350 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_11355 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU61_11355 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_11360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_11360 PF00005 ABC transporter ISU61_11365 PF00005 ABC transporter ISU61_11365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_11375 PF04269 Protein of unknown function, DUF440 ISU61_11380 PF13091 PLD-like domain ISU61_11380 PF13396 Phospholipase_D-nuclease N-terminal ISU61_11395 PF13505 Outer membrane protein beta-barrel domain ISU61_11410 PF03795 YCII-related domain ISU61_11415 PF03544 Gram-negative bacterial TonB protein C-terminal ISU61_11420 PF00872 Transposase, Mutator family ISU61_11425 PF03061 Thioesterase superfamily ISU61_11430 PF04279 Intracellular septation protein A ISU61_11455 PF03922 OmpW family ISU61_11465 PF00290 Tryptophan synthase alpha chain ISU61_11470 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_11475 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU61_11475 PF00218 Indole-3-glycerol phosphate synthase ISU61_11480 PF02885 Glycosyl transferase family, helical bundle domain ISU61_11480 PF00591 Glycosyl transferase family, a/b domain ISU61_11485 PF00117 Glutamine amidotransferase class-I ISU61_11490 PF04715 Anthranilate synthase component I, N terminal region ISU61_11490 PF00425 chorismate binding enzyme ISU61_11500 PF02811 PHP domain ISU61_11505 PF01300 Telomere recombination ISU61_11510 PF00849 RNA pseudouridylate synthase ISU61_11510 PF01479 S4 domain ISU61_11515 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU61_11520 PF00106 short chain dehydrogenase ISU61_11525 PF01343 Peptidase family S49 ISU61_11525 PF08496 Peptidase family S49 N-terminal ISU61_11530 PF10692 Protein of unknown function (DUF2498) ISU61_11540 PF08272 Topoisomerase I zinc-ribbon-like ISU61_11540 PF01131 DNA topoisomerase ISU61_11540 PF01751 Toprim domain ISU61_11540 PF01396 Topoisomerase DNA binding C4 zinc finger ISU61_11545 PF03466 LysR substrate binding domain ISU61_11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_11555 PF00694 Aconitase C-terminal domain ISU61_11555 PF00330 Aconitase family (aconitate hydratase) ISU61_11560 PF00925 GTP cyclohydrolase II ISU61_11565 PF01569 PAP2 superfamily ISU61_11570 PF06305 Lipopolysaccharide assembly protein A domain ISU61_11575 PF18073 Rubredoxin metal binding domain ISU61_11585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU61_11590 PF01253 Translation initiation factor SUI1 ISU61_11595 PF05433 Glycine zipper 2TM domain ISU61_11600 PF00596 Class II Aldolase and Adducin N-terminal domain ISU61_11610 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU61_11615 PF04328 Selenoprotein, putative ISU61_11620 PF13722 5TM C-terminal transporter carbon starvation CstA ISU61_11620 PF02554 Carbon starvation protein CstA ISU61_11625 PF08206 Ribonuclease B OB domain ISU61_11625 PF00575 S1 RNA binding domain ISU61_11625 PF17876 Cold shock domain ISU61_11625 PF00773 RNB domain ISU61_11635 PF01695 IstB-like ATP binding protein ISU61_11640 PF00665 Integrase core domain ISU61_11640 PF02796 Helix-turn-helix domain of resolvase ISU61_11650 PF01370 NAD dependent epimerase/dehydratase family ISU61_11655 PF10576 Iron-sulfur binding domain of endonuclease III ISU61_11655 PF00633 Helix-hairpin-helix motif ISU61_11655 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU61_11660 PF02508 Rnf-Nqr subunit, membrane protein ISU61_11665 PF04205 FMN-binding domain ISU61_11670 PF03116 NQR2, RnfD, RnfE family ISU61_11675 PF12833 Helix-turn-helix domain ISU61_11675 PF06445 GyrI-like small molecule binding domain ISU61_11680 PF13237 4Fe-4S dicluster domain ISU61_11680 PF10531 SLBB domain ISU61_11680 PF13375 RnfC Barrel sandwich hybrid domain ISU61_11680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU61_11685 PF04060 Putative Fe-S cluster ISU61_11690 PF02508 Rnf-Nqr subunit, membrane protein ISU61_11695 PF10754 Protein of unknown function (DUF2569) ISU61_11700 PF00664 ABC transporter transmembrane region ISU61_11700 PF00005 ABC transporter ISU61_11700 PF03412 Peptidase C39 family ISU61_11705 PF00664 ABC transporter transmembrane region ISU61_11705 PF00005 ABC transporter ISU61_11710 PF13533 Biotin-lipoyl like ISU61_11720 PF03412 Peptidase C39 family ISU61_11720 PF00664 ABC transporter transmembrane region ISU61_11720 PF00005 ABC transporter ISU61_11725 PF02610 L-arabinose isomerase ISU61_11725 PF11762 L-arabinose isomerase C-terminal domain ISU61_11730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_11735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU61_11740 PF00005 ABC transporter ISU61_11745 PF02653 Branched-chain amino acid transport system / permease component ISU61_11755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU61_11755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU61_11760 PF13593 SBF-like CPA transporter family (DUF4137) ISU61_11770 PF06097 Bacterial protein of unknown function (DUF945) ISU61_11775 PF01238 Phosphomannose isomerase type I ISU61_11780 PF00206 Lyase ISU61_11780 PF10415 Fumarase C C-terminus ISU61_11785 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU61_11790 PF07690 Major Facilitator Superfamily ISU61_11795 PF03466 LysR substrate binding domain ISU61_11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_11800 PF00480 ROK family ISU61_11810 PF00654 Voltage gated chloride channel ISU61_11815 PF00356 Bacterial regulatory proteins, lacI family ISU61_11830 PF09084 NMT1/THI5 like ISU61_11835 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_11840 PF00005 ABC transporter ISU61_11845 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU61_11845 PF01048 Phosphorylase superfamily ISU61_11875 PF00205 Thiamine pyrophosphate enzyme, central domain ISU61_11875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU61_11875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU61_11880 PF01842 ACT domain ISU61_11885 PF13419 Haloacid dehalogenase-like hydrolase ISU61_11900 PF00245 Alkaline phosphatase ISU61_11905 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU61_11905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU61_11910 PF00027 Cyclic nucleotide-binding domain ISU61_11910 PF13545 Crp-like helix-turn-helix domain ISU61_11915 PF00582 Universal stress protein family ISU61_11920 PF02233 NAD(P) transhydrogenase beta subunit ISU61_11925 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU61_11925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU61_11925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU61_11930 PF07338 Protein of unknown function (DUF1471) ISU61_11935 PF13520 Amino acid permease ISU61_11945 PF00072 Response regulator receiver domain ISU61_11945 PF00486 Transcriptional regulatory protein, C terminal ISU61_11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_11950 PF00512 His Kinase A (phospho-acceptor) domain ISU61_11950 PF00672 HAMP domain ISU61_11955 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU61_11960 PF01797 Transposase IS200 like ISU61_11975 PF04264 YceI-like domain ISU61_11980 PF01292 Prokaryotic cytochrome b561 ISU61_11990 PF00089 Trypsin ISU61_12005 PF11898 Domain of unknown function (DUF3418) ISU61_12005 PF04408 Helicase associated domain (HA2) ISU61_12005 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU61_12005 PF00270 DEAD/DEAH box helicase ISU61_12005 PF00271 Helicase conserved C-terminal domain ISU61_12010 PF02525 Flavodoxin-like fold ISU61_12015 PF04198 Putative sugar-binding domain ISU61_12015 PF00325 Bacterial regulatory proteins, crp family ISU61_12020 PF08125 Mannitol dehydrogenase C-terminal domain ISU61_12020 PF01232 Mannitol dehydrogenase Rossmann domain ISU61_12025 PF07027 Protein of unknown function (DUF1318) ISU61_12030 PF13617 YnbE-like lipoprotein ISU61_12035 PF11739 Dicarboxylate transport ISU61_12040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU61_12040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU61_12045 PF03724 META domain ISU61_12050 PF03891 Domain of unknown function (DUF333) ISU61_12055 PF02308 MgtC family ISU61_12060 PF00893 Small Multidrug Resistance protein ISU61_12065 PF10371 Domain of unknown function ISU61_12065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU61_12065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU61_12065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU61_12065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU61_12070 PF01171 PP-loop family ISU61_12075 PF07859 alpha/beta hydrolase fold ISU61_12085 PF01544 CorA-like Mg2+ transporter protein ISU61_12090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_12095 PF00246 Zinc carboxypeptidase ISU61_12100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU61_12100 PF13378 Enolase C-terminal domain-like ISU61_12105 PF08534 Redoxin ISU61_12110 PF01797 Transposase IS200 like ISU61_12115 PF00158 Sigma-54 interaction domain ISU61_12115 PF02954 Bacterial regulatory protein, Fis family ISU61_12120 PF04012 PspA/IM30 family ISU61_12125 PF06667 Phage shock protein B ISU61_12130 PF04024 PspC domain ISU61_12140 PF04317 YcjX-like family, DUF463 ISU61_12145 PF05128 Domain of unknown function (DUF697) ISU61_12150 PF08808 RES domain ISU61_12155 PF09722 Protein of unknown function (DUF2384) ISU61_12160 PF18024 Helix-turn-helix domain ISU61_12160 PF00158 Sigma-54 interaction domain ISU61_12165 PF01797 Transposase IS200 like ISU61_12170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_12175 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_12180 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU61_12180 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_12185 PF00005 ABC transporter ISU61_12185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU61_12190 PF00005 ABC transporter ISU61_12200 PF00854 POT family ISU61_12205 PF04893 Yip1 domain ISU61_12210 PF11656 YjbD family (DUF3811) ISU61_12215 PF00043 Glutathione S-transferase, C-terminal domain ISU61_12215 PF02798 Glutathione S-transferase, N-terminal domain ISU61_12220 PF08543 Phosphomethylpyrimidine kinase ISU61_12225 PF00579 tRNA synthetases class I (W and Y) ISU61_12225 PF01479 S4 domain ISU61_12230 PF01243 Pyridoxamine 5'-phosphate oxidase ISU61_12230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU61_12235 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU61_12240 PF03702 Anhydro-N-acetylmuramic acid kinase ISU61_12245 PF05433 Glycine zipper 2TM domain ISU61_12250 PF01047 MarR family ISU61_12255 PF00248 Aldo/keto reductase family ISU61_12260 PF06945 Protein of unknown function (DUF1289) ISU61_12265 PF00884 Sulfatase ISU61_12265 PF08019 Phosphoethanolamine transferase EptA/EptB ISU61_12270 PF00440 Bacterial regulatory proteins, tetR family ISU61_12270 PF16925 Tetracyclin repressor-like, C-terminal domain ISU61_12275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU61_12280 PF18807 Tripartite Tc toxins repeat ISU61_12280 PF14431 YwqJ-like deaminase ISU61_12285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU61_12290 PF00929 Exonuclease ISU61_12300 PF00462 Glutaredoxin ISU61_12305 PF00877 NlpC/P60 family ISU61_12310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU61_12310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU61_12320 PF00356 Bacterial regulatory proteins, lacI family ISU61_12325 PF03466 LysR substrate binding domain ISU61_12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_12330 PF07690 Major Facilitator Superfamily ISU61_12340 PF00677 Lumazine binding domain ISU61_12350 PF01554 MatE ISU61_12365 PF02887 Pyruvate kinase, alpha/beta domain ISU61_12365 PF00224 Pyruvate kinase, barrel domain ISU61_12370 PF04728 Lipoprotein leucine-zipper ISU61_12375 PF01797 Transposase IS200 like ISU61_12380 PF02796 Helix-turn-helix domain of resolvase ISU61_12380 PF00665 Integrase core domain ISU61_12385 PF01695 IstB-like ATP binding protein ISU61_12390 PF17969 L,D-transpeptidase C-terminal domain ISU61_12390 PF01476 LysM domain ISU61_12390 PF03734 L,D-transpeptidase catalytic domain ISU61_12395 PF02657 Fe-S metabolism associated domain ISU61_12400 PF00266 Aminotransferase class-V ISU61_12405 PF01458 Uncharacterized protein family (UPF0051) ISU61_12410 PF00005 ABC transporter ISU61_12415 PF01458 Uncharacterized protein family (UPF0051) ISU61_12420 PF01521 Iron-sulphur cluster biosynthesis ISU61_12425 PF03061 Thioesterase superfamily ISU61_12430 PF13183 4Fe-4S dicluster domain ISU61_12430 PF02913 FAD linked oxidases, C-terminal domain ISU61_12430 PF01565 FAD binding domain ISU61_12435 PF01594 AI-2E family transporter ISU61_12445 PF00391 PEP-utilising enzyme, mobile domain ISU61_12445 PF02896 PEP-utilising enzyme, TIM barrel domain ISU61_12445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU61_12450 PF03618 Kinase/pyrophosphorylase ISU61_12455 PF00793 DAHP synthetase I family ISU61_12465 PF10437 Bacterial lipoate protein ligase C-terminus ISU61_12465 PF03099 Biotin/lipoate A/B protein ligase family ISU61_12470 PF00877 NlpC/P60 family ISU61_12485 PF00892 EamA-like transporter family ISU61_12490 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU61_12495 PF01522 Polysaccharide deacetylase ISU61_12500 PF00551 Formyl transferase ISU61_12500 PF01370 NAD dependent epimerase/dehydratase family ISU61_12500 PF02911 Formyl transferase, C-terminal domain ISU61_12505 PF00535 Glycosyl transferase family 2 ISU61_12510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU61_12515 PF00005 ABC transporter ISU61_12520 PF00255 Glutathione peroxidase ISU61_12525 PF01032 FecCD transport family ISU61_12535 PF00216 Bacterial DNA-binding protein ISU61_12540 PF03147 Ferredoxin-fold anticodon binding domain ISU61_12540 PF03484 tRNA synthetase B5 domain ISU61_12540 PF01588 Putative tRNA binding domain ISU61_12540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU61_12540 PF03483 B3/4 domain ISU61_12545 PF01409 tRNA synthetases class II core domain (F) ISU61_12545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU61_12555 PF00453 Ribosomal protein L20 ISU61_12560 PF01632 Ribosomal protein L35 ISU61_12565 PF00707 Translation initiation factor IF-3, C-terminal domain ISU61_12565 PF05198 Translation initiation factor IF-3, N-terminal domain ISU61_12570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU61_12570 PF03129 Anticodon binding domain ISU61_12570 PF02824 TGS domain ISU61_12570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU61_12575 PF13619 KTSC domain ISU61_12585 PF01914 MarC family integral membrane protein ISU61_12590 PF01464 Transglycosylase SLT domain ISU61_12595 PF01297 Zinc-uptake complex component A periplasmic ISU61_12600 PF00005 ABC transporter ISU61_12605 PF00950 ABC 3 transport family ISU61_12610 PF00950 ABC 3 transport family ISU61_12620 PF03881 Fructosamine kinase ISU61_12625 PF14002 YniB-like protein ISU61_12630 PF13419 Haloacid dehalogenase-like hydrolase ISU61_12635 PF00872 Transposase, Mutator family ISU61_12665 PF05638 Type VI secretion system effector, Hcp ISU61_12670 PF01797 Transposase IS200 like ISU61_12675 PF00117 Glutamine amidotransferase class-I ISU61_12675 PF02540 NAD synthase ISU61_12675 PF00958 GMP synthase C terminal domain ISU61_12680 PF00571 CBS domain ISU61_12680 PF00478 IMP dehydrogenase / GMP reductase domain ISU61_12685 PF02601 Exonuclease VII, large subunit ISU61_12685 PF13742 OB-fold nucleic acid binding domain ISU61_12690 PF07191 zinc-ribbons ISU61_12700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU61_12700 PF01926 50S ribosome-binding GTPase ISU61_12705 PF13360 PQQ-like domain ISU61_12710 PF09976 Tetratricopeptide repeat-like domain ISU61_12715 PF13393 Histidyl-tRNA synthetase ISU61_12715 PF03129 Anticodon binding domain ISU61_12720 PF04551 GcpE protein ISU61_12725 PF13464 Domain of unknown function (DUF4115) ISU61_12735 PF04055 Radical SAM superfamily ISU61_12740 PF00334 Nucleoside diphosphate kinase ISU61_12750 PF03797 Autotransporter beta-domain ISU61_12750 PF03212 Pertactin ISU61_12750 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU61_12755 PF03212 Pertactin ISU61_12755 PF03797 Autotransporter beta-domain ISU61_12755 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU61_12770 PF07179 SseB protein N-terminal domain ISU61_12770 PF14581 SseB protein C-terminal domain ISU61_12775 PF00883 Cytosol aminopeptidase family, catalytic domain ISU61_12775 PF12404 Peptidase ISU61_12780 PF04384 Iron-sulphur cluster assembly ISU61_12785 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU61_12790 PF00012 Hsp70 protein ISU61_12795 PF07743 HSCB C-terminal oligomerisation domain ISU61_12795 PF00226 DnaJ domain ISU61_12800 PF01521 Iron-sulphur cluster biosynthesis ISU61_12805 PF01592 NifU-like N terminal domain ISU61_12810 PF00266 Aminotransferase class-V ISU61_12815 PF02082 Transcriptional regulator ISU61_12820 PF00588 SpoU rRNA Methylase family ISU61_12825 PF00459 Inositol monophosphatase family ISU61_12830 PF03824 High-affinity nickel-transport protein ISU61_12835 PF06226 Protein of unknown function (DUF1007) ISU61_12840 PF00874 PRD domain ISU61_12845 PF12832 MFS_1 like family ISU61_12850 PF13505 Outer membrane protein beta-barrel domain ISU61_12860 PF00464 Serine hydroxymethyltransferase ISU61_12865 PF00042 Globin ISU61_12865 PF00970 Oxidoreductase FAD-binding domain ISU61_12865 PF00175 Oxidoreductase NAD-binding domain ISU61_12870 PF14502 Helix-turn-helix domain ISU61_12870 PF14503 YhfZ C-terminal domain ISU61_12875 PF00543 Nitrogen regulatory protein P-II ISU61_12880 PF02540 NAD synthase ISU61_12880 PF00795 Carbon-nitrogen hydrolase ISU61_12885 PF00072 Response regulator receiver domain ISU61_12885 PF00158 Sigma-54 interaction domain ISU61_12890 PF13942 YfhG lipoprotein ISU61_12895 PF00512 His Kinase A (phospho-acceptor) domain ISU61_12895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_12900 PF01797 Transposase IS200 like ISU61_12925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU61_12925 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU61_12925 PF02769 AIR synthase related protein, C-terminal domain ISU61_12930 PF01464 Transglycosylase SLT domain ISU61_12930 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_12935 PF14437 MafB19-like deaminase ISU61_12945 PF01380 SIS domain ISU61_12950 PF01418 Helix-turn-helix domain, rpiR family ISU61_12950 PF01380 SIS domain ISU61_12955 PF01695 IstB-like ATP binding protein ISU61_12960 PF00665 Integrase core domain ISU61_12960 PF02796 Helix-turn-helix domain of resolvase ISU61_12970 PF12838 4Fe-4S dicluster domain ISU61_12975 PF01797 Transposase IS200 like ISU61_12980 PF01648 4'-phosphopantetheinyl transferase superfamily ISU61_12985 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU61_12990 PF02565 Recombination protein O C terminal ISU61_12990 PF11967 Recombination protein O N terminal ISU61_12995 PF01926 50S ribosome-binding GTPase ISU61_12995 PF07650 KH domain ISU61_13000 PF00035 Double-stranded RNA binding motif ISU61_13000 PF14622 Ribonuclease-III-like ISU61_13005 PF10502 Signal peptidase, peptidase S26 ISU61_13010 PF03144 Elongation factor Tu domain 2 ISU61_13010 PF00009 Elongation factor Tu GTP binding domain ISU61_13010 PF00679 Elongation factor G C-terminus ISU61_13010 PF06421 GTP-binding protein LepA C-terminus ISU61_13025 PF17188 MucB/RseB C-terminal domain ISU61_13025 PF03888 MucB/RseB N-terminal domain ISU61_13030 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU61_13030 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU61_13035 PF04542 Sigma-70 region 2 ISU61_13035 PF08281 Sigma-70, region 4 ISU61_13040 PF00890 FAD binding domain ISU61_13040 PF02910 Fumarate reductase flavoprotein C-term ISU61_13045 PF05175 Methyltransferase small domain ISU61_13050 PF00271 Helicase conserved C-terminal domain ISU61_13050 PF00270 DEAD/DEAH box helicase ISU61_13055 PF12796 Ankyrin repeats (3 copies) ISU61_13065 PF01228 Glycine radical ISU61_13070 PF03167 Uracil DNA glycosylase superfamily ISU61_13075 PF01470 Pyroglutamyl peptidase ISU61_13090 PF03746 LamB/YcsF family ISU61_13095 PF02626 Carboxyltransferase domain, subdomain A and B ISU61_13110 PF01784 NIF3 (NGG1p interacting factor 3) ISU61_13115 PF02112 cAMP phosphodiesterases class-II ISU61_13120 PF03441 FAD binding domain of DNA photolyase ISU61_13120 PF00875 DNA photolyase ISU61_13125 PF08349 Protein of unknown function (DUF1722) ISU61_13130 PF10725 Protein of unknown function (DUF2517) ISU61_13145 PF03814 Potassium-transporting ATPase A subunit ISU61_13155 PF02669 K+-transporting ATPase, c chain ISU61_13160 PF13492 GAF domain ISU61_13160 PF13493 Domain of unknown function (DUF4118) ISU61_13160 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU61_13160 PF00512 His Kinase A (phospho-acceptor) domain ISU61_13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_13165 PF00486 Transcriptional regulatory protein, C terminal ISU61_13165 PF00072 Response regulator receiver domain ISU61_13180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU61_13180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU61_13180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU61_13180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU61_13185 PF03925 SeqA protein C-terminal domain ISU61_13185 PF17206 SeqA protein N-terminal domain ISU61_13195 PF04794 YdjC-like protein ISU61_13200 PF07883 Cupin domain ISU61_13200 PF12833 Helix-turn-helix domain ISU61_13205 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU61_13210 PF02378 Phosphotransferase system, EIIC ISU61_13215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU61_13225 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU61_13230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU61_13235 PF02254 TrkA-N domain ISU61_13235 PF07885 Ion channel ISU61_13240 PF06411 HdeA/HdeB family ISU61_13245 PF03824 High-affinity nickel-transport protein ISU61_13250 PF03253 Urea transporter ISU61_13260 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU61_13265 PF01730 UreF ISU61_13270 PF02814 UreE urease accessory protein, N-terminal domain ISU61_13270 PF05194 UreE urease accessory protein, C-terminal domain ISU61_13275 PF01979 Amidohydrolase family ISU61_13275 PF00449 Urease alpha-subunit, N-terminal domain ISU61_13280 PF00699 Urease beta subunit ISU61_13285 PF00547 Urease, gamma subunit ISU61_13290 PF00005 ABC transporter ISU61_13295 PF00005 ABC transporter ISU61_13300 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_13300 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU61_13305 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_13310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_13315 PF00313 'Cold-shock' DNA-binding domain ISU61_13330 PF00872 Transposase, Mutator family ISU61_13335 PF00577 Outer membrane usher protein ISU61_13335 PF13953 PapC C-terminal domain ISU61_13335 PF13954 PapC N-terminal domain ISU61_13340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_13340 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_13345 PF16970 Type-1 fimbrial protein, A ISU61_13350 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_13350 PF07724 AAA domain (Cdc48 subfamily) ISU61_13350 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_13350 PF17871 AAA lid domain ISU61_13355 PF05947 Type VI secretion system, TssF ISU61_13400 PF13406 Transglycosylase SLT domain ISU61_13410 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_13415 PF00005 ABC transporter ISU61_13425 PF05638 Type VI secretion system effector, Hcp ISU61_13435 PF00384 Molybdopterin oxidoreductase ISU61_13435 PF01568 Molydopterin dinucleotide binding domain ISU61_13435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU61_13440 PF13247 4Fe-4S dicluster domain ISU61_13440 PF12800 4Fe-4S binding domain ISU61_13445 PF04976 DMSO reductase anchor subunit (DmsC) ISU61_13450 PF02613 Nitrate reductase delta subunit ISU61_13460 PF05643 Putative bacterial lipoprotein (DUF799) ISU61_13470 PF03783 Curli production assembly/transport component CsgG ISU61_13480 PF01292 Prokaryotic cytochrome b561 ISU61_13490 PF07350 Protein of unknown function (DUF1479) ISU61_13495 PF02685 Glucokinase ISU61_13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_13505 PF03466 LysR substrate binding domain ISU61_13510 PF00248 Aldo/keto reductase family ISU61_13520 PF01566 Natural resistance-associated macrophage protein ISU61_13525 PF01773 Na+ dependent nucleoside transporter N-terminus ISU61_13525 PF07662 Na+ dependent nucleoside transporter C-terminus ISU61_13525 PF07670 Nucleoside recognition ISU61_13560 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU61_13580 PF12843 Putative quorum-sensing-regulated virulence factor ISU61_13585 PF01653 NAD-dependent DNA ligase adenylation domain ISU61_13585 PF12826 Helix-hairpin-helix motif ISU61_13585 PF00533 BRCA1 C Terminus (BRCT) domain ISU61_13585 PF03120 NAD-dependent DNA ligase OB-fold domain ISU61_13585 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU61_13590 PF04354 ZipA, C-terminal FtsZ-binding domain ISU61_13600 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_13605 PF00381 PTS HPr component phosphorylation site ISU61_13610 PF00391 PEP-utilising enzyme, mobile domain ISU61_13610 PF02896 PEP-utilising enzyme, TIM barrel domain ISU61_13610 PF05524 PEP-utilising enzyme, N-terminal ISU61_13615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU61_13620 PF01797 Transposase IS200 like ISU61_13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_13625 PF00672 HAMP domain ISU61_13625 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU61_13625 PF00512 His Kinase A (phospho-acceptor) domain ISU61_13630 PF00072 Response regulator receiver domain ISU61_13630 PF00486 Transcriptional regulatory protein, C terminal ISU61_13635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_13640 PF02687 FtsX-like permease family ISU61_13640 PF12704 MacB-like periplasmic core domain ISU61_13640 PF00005 ABC transporter ISU61_13645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU61_13645 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_13650 PF00474 Sodium:solute symporter family ISU61_13660 PF00557 Metallopeptidase family M24 ISU61_13670 PF00155 Aminotransferase class I and II ISU61_13680 PF00672 HAMP domain ISU61_13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_13680 PF00512 His Kinase A (phospho-acceptor) domain ISU61_13685 PF00486 Transcriptional regulatory protein, C terminal ISU61_13685 PF00072 Response regulator receiver domain ISU61_13695 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_13700 PF00005 ABC transporter ISU61_13705 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_13710 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_13720 PF07690 Major Facilitator Superfamily ISU61_13725 PF01380 SIS domain ISU61_13725 PF01418 Helix-turn-helix domain, rpiR family ISU61_13730 PF04074 YhcH/YjgK/YiaL ISU61_13735 PF00480 ROK family ISU61_13740 PF12468 Type III secretion system leucine rich repeat protein ISU61_13745 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU61_13750 PF00701 Dihydrodipicolinate synthetase family ISU61_13755 PF04261 Dyp-type peroxidase family ISU61_13760 PF06572 Protein of unknown function (DUF1131) ISU61_13765 PF04076 Bacterial OB fold (BOF) protein ISU61_13770 PF13018 Extended Signal Peptide of Type V secretion system ISU61_13770 PF03212 Pertactin ISU61_13770 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU61_13770 PF03797 Autotransporter beta-domain ISU61_13780 PF00583 Acetyltransferase (GNAT) family ISU61_13785 PF01218 Coproporphyrinogen III oxidase ISU61_13790 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU61_13795 PF00390 Malic enzyme, N-terminal domain ISU61_13795 PF01515 Phosphate acetyl/butaryl transferase ISU61_13795 PF03949 Malic enzyme, NAD binding domain ISU61_13800 PF00293 NUDIX domain ISU61_13805 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU61_13810 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU61_13815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU61_13815 PF00384 Molybdopterin oxidoreductase ISU61_13815 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU61_13815 PF01568 Molydopterin dinucleotide binding domain ISU61_13820 PF03927 NapD protein ISU61_13825 PF00037 4Fe-4S binding domain ISU61_13825 PF12800 4Fe-4S binding domain ISU61_13825 PF13187 4Fe-4S dicluster domain ISU61_13830 PF00072 Response regulator receiver domain ISU61_13830 PF00196 Bacterial regulatory proteins, luxR family ISU61_13840 PF00873 AcrB/AcrD/AcrF family ISU61_13850 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU61_13855 PF13186 Iron-sulfur cluster-binding domain ISU61_13855 PF04055 Radical SAM superfamily ISU61_13860 PF00884 Sulfatase ISU61_13870 PF00005 ABC transporter ISU61_13870 PF08402 TOBE domain ISU61_13875 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_13890 PF03960 ArsC family ISU61_13895 PF07687 Peptidase dimerisation domain ISU61_13895 PF01546 Peptidase family M20/M25/M40 ISU61_13900 PF02557 D-alanyl-D-alanine carboxypeptidase ISU61_13905 PF13980 Uncharacterised protein family (UPF0370) ISU61_13910 PF17176 tRNA-binding domain ISU61_13910 PF05127 Helicase ISU61_13910 PF13718 GNAT acetyltransferase 2 ISU61_13910 PF08351 Domain of unknown function (DUF1726) ISU61_13915 PF04284 Protein of unknown function (DUF441) ISU61_13920 PF04228 Putative neutral zinc metallopeptidase ISU61_13925 PF01259 SAICAR synthetase ISU61_13930 PF01797 Transposase IS200 like ISU61_13935 PF06804 NlpB/DapX lipoprotein ISU61_13940 PF00701 Dihydrodipicolinate synthetase family ISU61_13945 PF01842 ACT domain ISU61_13950 PF00578 AhpC/TSA family ISU61_13960 PF01594 AI-2E family transporter ISU61_13965 PF01435 Peptidase family M48 ISU61_13965 PF07720 Tetratricopeptide repeat ISU61_13970 PF03960 ArsC family ISU61_13975 PF00308 Bacterial dnaA protein ISU61_13980 PF01797 Transposase IS200 like ISU61_13990 PF00586 AIR synthase related protein, N-terminal domain ISU61_13990 PF02769 AIR synthase related protein, C-terminal domain ISU61_13995 PF00551 Formyl transferase ISU61_14000 PF13302 Acetyltransferase (GNAT) domain ISU61_14010 PF00005 ABC transporter ISU61_14015 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_14020 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_14025 PF13089 Polyphosphate kinase N-terminal domain ISU61_14025 PF02503 Polyphosphate kinase middle domain ISU61_14025 PF13090 Polyphosphate kinase C-terminal domain 2 ISU61_14025 PF17941 Polyphosphate kinase C-terminal domain 1 ISU61_14030 PF02541 Ppx/GppA phosphatase family ISU61_14040 PF00571 CBS domain ISU61_14040 PF01769 Divalent cation transporter ISU61_14040 PF03448 MgtE intracellular N domain ISU61_14045 PF00012 Hsp70 protein ISU61_14050 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_14055 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_14065 PF00202 Aminotransferase class-III ISU61_14070 PF00392 Bacterial regulatory proteins, gntR family ISU61_14070 PF00155 Aminotransferase class I and II ISU61_14075 PF08402 TOBE domain ISU61_14075 PF00005 ABC transporter ISU61_14080 PF13533 Biotin-lipoyl like ISU61_14085 PF00873 AcrB/AcrD/AcrF family ISU61_14090 PF00873 AcrB/AcrD/AcrF family ISU61_14095 PF07690 Major Facilitator Superfamily ISU61_14100 PF00672 HAMP domain ISU61_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_14100 PF00512 His Kinase A (phospho-acceptor) domain ISU61_14105 PF00486 Transcriptional regulatory protein, C terminal ISU61_14105 PF00072 Response regulator receiver domain ISU61_14110 PF07411 Domain of unknown function (DUF1508) ISU61_14115 PF16325 Peptidase family U32 C-terminal domain ISU61_14115 PF01136 Peptidase family U32 ISU61_14120 PF00781 Diacylglycerol kinase catalytic domain ISU61_14135 PF08543 Phosphomethylpyrimidine kinase ISU61_14150 PF00872 Transposase, Mutator family ISU61_14160 PF07024 ImpE protein ISU61_14175 PF06715 Gp5 C-terminal repeat (3 copies) ISU61_14175 PF04717 Type VI secretion system, phage-baseplate injector ISU61_14180 PF06744 Type VI secretion protein IcmF C-terminal ISU61_14180 PF14331 ImcF-related N-terminal domain ISU61_14180 PF06761 Intracellular multiplication and human macrophage-killing ISU61_14190 PF01695 IstB-like ATP binding protein ISU61_14195 PF00665 Integrase core domain ISU61_14195 PF02796 Helix-turn-helix domain of resolvase ISU61_14205 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU61_14220 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU61_14225 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU61_14235 PF00577 Outer membrane usher protein ISU61_14235 PF13953 PapC C-terminal domain ISU61_14235 PF13954 PapC N-terminal domain ISU61_14240 PF00872 Transposase, Mutator family ISU61_14250 PF09400 Protein of unknown function (DUF2002) ISU61_14255 PF06392 Acid shock protein repeat ISU61_14270 PF00317 Ribonucleotide reductase, all-alpha domain ISU61_14270 PF02867 Ribonucleotide reductase, barrel domain ISU61_14270 PF08343 Ribonucleotide reductase N-terminal ISU61_14275 PF00268 Ribonucleotide reductase, small chain ISU61_14280 PF00571 CBS domain ISU61_14280 PF00005 ABC transporter ISU61_14285 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_14290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU61_14305 PF00665 Integrase core domain ISU61_14305 PF02796 Helix-turn-helix domain of resolvase ISU61_14310 PF01695 IstB-like ATP binding protein ISU61_14320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU61_14330 PF00929 Exonuclease ISU61_14335 PF00075 RNase H ISU61_14340 PF08241 Methyltransferase domain ISU61_14345 PF00753 Metallo-beta-lactamase superfamily ISU61_14345 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU61_14350 PF01464 Transglycosylase SLT domain ISU61_14350 PF01476 LysM domain ISU61_14355 PF03372 Endonuclease/Exonuclease/phosphatase family ISU61_14365 PF00248 Aldo/keto reductase family ISU61_14405 PF09383 NIL domain ISU61_14405 PF00005 ABC transporter ISU61_14410 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_14415 PF03180 NLPA lipoprotein ISU61_14420 PF16358 RcsF lipoprotein ISU61_14425 PF01980 tRNA-methyltransferase O ISU61_14425 PF18389 TrmO C-terminal domain ISU61_14430 PF03129 Anticodon binding domain ISU61_14430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU61_14430 PF04073 Aminoacyl-tRNA editing domain ISU61_14435 PF04170 NlpE N-terminal domain ISU61_14435 PF17185 NlpE C-terminal OB domain ISU61_14440 PF00472 RF-1 domain ISU61_14445 PF07152 YaeQ protein ISU61_14450 PF06786 Uncharacterised protein family (UPF0253) ISU61_14455 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU61_14460 PF00034 Cytochrome c ISU61_14465 PF11734 TilS substrate C-terminal domain ISU61_14465 PF09179 TilS substrate binding domain ISU61_14465 PF01171 PP-loop family ISU61_14470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU61_14475 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU61_14480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU61_14480 PF01336 OB-fold nucleic acid binding domain ISU61_14480 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU61_14480 PF14579 Helix-hairpin-helix motif ISU61_14480 PF02811 PHP domain ISU61_14485 PF01351 Ribonuclease HII ISU61_14490 PF02684 Lipid-A-disaccharide synthetase ISU61_14495 PF00132 Bacterial transferase hexapeptide (six repeats) ISU61_14495 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU61_14500 PF07977 FabA-like domain ISU61_14505 PF00132 Bacterial transferase hexapeptide (six repeats) ISU61_14505 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU61_14510 PF03938 Outer membrane protein (OmpH-like) ISU61_14515 PF01103 Surface antigen ISU61_14515 PF07244 Surface antigen variable number repeat ISU61_14520 PF17820 PDZ domain ISU61_14520 PF02163 Peptidase family M50 ISU61_14530 PF01255 Putative undecaprenyl diphosphate synthase ISU61_14535 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU61_14535 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU61_14535 PF13288 DXP reductoisomerase C-terminal domain ISU61_14540 PF01765 Ribosome recycling factor ISU61_14545 PF00696 Amino acid kinase family ISU61_14550 PF00889 Elongation factor TS ISU61_14555 PF00318 Ribosomal protein S2 ISU61_14560 PF00557 Metallopeptidase family M24 ISU61_14565 PF01842 ACT domain ISU61_14565 PF01966 HD domain ISU61_14565 PF01909 Nucleotidyltransferase domain ISU61_14565 PF08335 GlnD PII-uridylyltransferase ISU61_14570 PF00132 Bacterial transferase hexapeptide (six repeats) ISU61_14570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU61_14570 PF14602 Hexapeptide repeat of succinyl-transferase ISU61_14575 PF11944 Protein of unknown function (DUF3461) ISU61_14580 PF00258 Flavodoxin ISU61_14585 PF00849 RNA pseudouridylate synthase ISU61_14590 PF04287 tRNA pseudouridine synthase C ISU61_14595 PF01797 Transposase IS200 like ISU61_14600 PF07348 Syd protein (SUKH-2) ISU61_14605 PF14489 QueF-like protein ISU61_14605 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU61_14610 PF11892 Domain of unknown function (DUF3412) ISU61_14610 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU61_14610 PF03641 Possible lysine decarboxylase ISU61_14615 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU61_14615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU61_14620 PF01728 FtsJ-like methyltransferase ISU61_14620 PF18125 RlmM ferredoxin-like domain ISU61_14625 PF04241 Protein of unknown function (DUF423) ISU61_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_14630 PF03466 LysR substrate binding domain ISU61_14640 PF00266 Aminotransferase class-V ISU61_14645 PF02657 Fe-S metabolism associated domain ISU61_14650 PF00899 ThiF family ISU61_14655 PF06725 3D domain ISU61_14655 PF03562 MltA specific insert domain ISU61_14670 PF11741 AMIN domain ISU61_14670 PF01520 N-acetylmuramoyl-L-alanine amidase ISU61_14675 PF00583 Acetyltransferase (GNAT) family ISU61_14675 PF00696 Amino acid kinase family ISU61_14680 PF13538 UvrD-like helicase C-terminal domain ISU61_14685 PF13361 UvrD-like helicase C-terminal domain ISU61_14685 PF12705 PD-(D/E)XK nuclease superfamily ISU61_14685 PF00580 UvrD/REP helicase N-terminal domain ISU61_14690 PF00675 Insulinase (Peptidase family M16) ISU61_14690 PF05193 Peptidase M16 inactive domain ISU61_14690 PF16187 Middle or third domain of peptidase_M16 ISU61_14695 PF17946 RecC C-terminal domain ISU61_14720 PF00303 Thymidylate synthase ISU61_14725 PF01790 Prolipoprotein diacylglyceryl transferase ISU61_14730 PF02896 PEP-utilising enzyme, TIM barrel domain ISU61_14730 PF05524 PEP-utilising enzyme, N-terminal ISU61_14730 PF01590 GAF domain ISU61_14730 PF00391 PEP-utilising enzyme, mobile domain ISU61_14735 PF00293 NUDIX domain ISU61_14740 PF02976 DNA mismatch repair enzyme MutH ISU61_14750 PF02796 Helix-turn-helix domain of resolvase ISU61_14750 PF00665 Integrase core domain ISU61_14755 PF01695 IstB-like ATP binding protein ISU61_14775 PF07690 Major Facilitator Superfamily ISU61_14780 PF13193 AMP-binding enzyme C-terminal domain ISU61_14780 PF00501 AMP-binding enzyme ISU61_14780 PF01553 Acyltransferase ISU61_14785 PF01568 Molydopterin dinucleotide binding domain ISU61_14785 PF00384 Molybdopterin oxidoreductase ISU61_14790 PF00356 Bacterial regulatory proteins, lacI family ISU61_14795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU61_14795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU61_14800 PF03466 LysR substrate binding domain ISU61_14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_14805 PF07690 Major Facilitator Superfamily ISU61_14810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_14810 PF03466 LysR substrate binding domain ISU61_14825 PF02203 Tar ligand binding domain homologue ISU61_14825 PF00672 HAMP domain ISU61_14825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU61_14845 PF06750 Bacterial Peptidase A24 N-terminal domain ISU61_14845 PF01478 Type IV leader peptidase family ISU61_14865 PF07963 Prokaryotic N-terminal methylation motif ISU61_14865 PF11612 Type II secretion system (T2SS), protein J ISU61_14870 PF02501 Type II secretion system (T2SS), protein I ISU61_14870 PF07963 Prokaryotic N-terminal methylation motif ISU61_14880 PF08334 Type II secretion system (T2SS), protein G ISU61_14880 PF07963 Prokaryotic N-terminal methylation motif ISU61_14890 PF00437 Type II/IV secretion system protein ISU61_14895 PF03958 Bacterial type II/III secretion system short domain ISU61_14895 PF00263 Bacterial type II and III secretion system protein ISU61_14910 PF00484 Carbonic anhydrase ISU61_14930 PF09093 Lyase, catalytic ISU61_14930 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU61_14930 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU61_14930 PF09092 Lyase, N terminal ISU61_14935 PF01695 IstB-like ATP binding protein ISU61_14940 PF02796 Helix-turn-helix domain of resolvase ISU61_14940 PF00665 Integrase core domain ISU61_14950 PF07681 DoxX ISU61_14960 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU61_14965 PF05957 Bacterial protein of unknown function (DUF883) ISU61_14975 PF13721 SecD export protein N-terminal TM region ISU61_14980 PF09335 SNARE associated Golgi protein ISU61_14990 PF00392 Bacterial regulatory proteins, gntR family ISU61_14990 PF07729 FCD domain ISU61_14995 PF07690 Major Facilitator Superfamily ISU61_15000 PF02614 Glucuronate isomerase ISU61_15005 PF01232 Mannitol dehydrogenase Rossmann domain ISU61_15005 PF08125 Mannitol dehydrogenase C-terminal domain ISU61_15010 PF08666 SAF domain ISU61_15010 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU61_15015 PF10688 Bacterial inner membrane protein ISU61_15020 PF01797 Transposase IS200 like ISU61_15025 PF00375 Sodium:dicarboxylate symporter family ISU61_15030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU61_15035 PF01863 Protein of unknown function DUF45 ISU61_15045 PF05175 Methyltransferase small domain ISU61_15050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU61_15050 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_15055 PF03729 Short repeat of unknown function (DUF308) ISU61_15080 PF02342 TerD domain ISU61_15085 PF00092 von Willebrand factor type A domain ISU61_15090 PF08479 POTRA domain, ShlB-type ISU61_15090 PF17287 POTRA domain ISU61_15090 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU61_15095 PF04829 Pre-toxin domain with VENN motif ISU61_15095 PF13018 Extended Signal Peptide of Type V secretion system ISU61_15095 PF13332 Hemagglutinin repeat ISU61_15095 PF05860 haemagglutination activity domain ISU61_15105 PF04829 Pre-toxin domain with VENN motif ISU61_15105 PF13332 Hemagglutinin repeat ISU61_15110 PF04829 Pre-toxin domain with VENN motif ISU61_15110 PF13332 Hemagglutinin repeat ISU61_15125 PF05860 haemagglutination activity domain ISU61_15125 PF04829 Pre-toxin domain with VENN motif ISU61_15125 PF13018 Extended Signal Peptide of Type V secretion system ISU61_15125 PF13332 Hemagglutinin repeat ISU61_15130 PF13332 Hemagglutinin repeat ISU61_15130 PF05860 haemagglutination activity domain ISU61_15130 PF13018 Extended Signal Peptide of Type V secretion system ISU61_15130 PF04829 Pre-toxin domain with VENN motif ISU61_15150 PF03459 TOBE domain ISU61_15150 PF17912 MalK OB fold domain ISU61_15150 PF00005 ABC transporter ISU61_15155 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU61_15160 PF00356 Bacterial regulatory proteins, lacI family ISU61_15165 PF01547 Bacterial extracellular solute-binding protein ISU61_15170 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_15175 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_15185 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU61_15185 PF14310 Fibronectin type III-like domain ISU61_15185 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU61_15195 PF04632 Fusaric acid resistance protein family ISU61_15200 PF00529 HlyD membrane-fusion protein of T1SS ISU61_15200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_15215 PF00155 Aminotransferase class I and II ISU61_15235 PF01042 Endoribonuclease L-PSP ISU61_15255 PF03466 LysR substrate binding domain ISU61_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_15295 PF00872 Transposase, Mutator family ISU61_15315 PF00140 Sigma-70 factor, region 1.2 ISU61_15315 PF04542 Sigma-70 region 2 ISU61_15315 PF04539 Sigma-70 region 3 ISU61_15315 PF03979 Sigma-70 factor, region 1.1 ISU61_15315 PF04546 Sigma-70, non-essential region ISU61_15315 PF04545 Sigma-70, region 4 ISU61_15320 PF08275 DNA primase catalytic core, N-terminal domain ISU61_15320 PF08278 DNA primase DnaG DnaB-binding ISU61_15320 PF01807 CHC2 zinc finger ISU61_15320 PF10410 DnaB-helicase binding domain of primase ISU61_15325 PF01165 Ribosomal protein S21 ISU61_15330 PF00814 Glycoprotease family ISU61_15335 PF02660 Glycerol-3-phosphate acyltransferase ISU61_15340 PF02152 Dihydroneopterin aldolase ISU61_15345 PF02673 Bacitracin resistance protein BacA ISU61_15350 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU61_15350 PF01743 Poly A polymerase head domain ISU61_15350 PF01966 HD domain ISU61_15355 PF08239 Bacterial SH3 domain ISU61_15360 PF01928 CYTH domain ISU61_15365 PF08335 GlnD PII-uridylyltransferase ISU61_15365 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU61_15370 PF00294 pfkB family carbohydrate kinase ISU61_15370 PF01467 Cytidylyltransferase-like ISU61_15375 PF13520 Amino acid permease ISU61_15385 PF04380 Membrane fusogenic activity ISU61_15390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU61_15395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU61_15400 PF03738 Glutathionylspermidine synthase preATP-grasp ISU61_15405 PF06693 Protein of unknown function (DUF1190) ISU61_15410 PF02321 Outer membrane efflux protein ISU61_15415 PF00293 NUDIX domain ISU61_15420 PF06853 Protein of unknown function (DUF1249) ISU61_15425 PF00149 Calcineurin-like phosphoesterase ISU61_15430 PF05728 Uncharacterised protein family (UPF0227) ISU61_15435 PF00204 DNA gyrase B ISU61_15435 PF00986 DNA gyrase B subunit, carboxyl terminus ISU61_15435 PF01751 Toprim domain ISU61_15435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_15440 PF03466 LysR substrate binding domain ISU61_15445 PF02525 Flavodoxin-like fold ISU61_15455 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU61_15455 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU61_15460 PF01553 Acyltransferase ISU61_15465 PF07731 Multicopper oxidase ISU61_15465 PF07732 Multicopper oxidase ISU61_15475 PF00248 Aldo/keto reductase family ISU61_15485 PF00465 Iron-containing alcohol dehydrogenase ISU61_15490 PF12833 Helix-turn-helix domain ISU61_15490 PF06719 AraC-type transcriptional regulator N-terminus ISU61_15495 PF09335 SNARE associated Golgi protein ISU61_15500 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU61_15505 PF01618 MotA/TolQ/ExbB proton channel family ISU61_15510 PF02472 Biopolymer transport protein ExbD/TolR ISU61_15545 PF00437 Type II/IV secretion system protein ISU61_15560 PF13629 Pilus formation protein N terminal region ISU61_15560 PF00263 Bacterial type II and III secretion system protein ISU61_15560 PF04972 BON domain ISU61_15565 PF04972 BON domain ISU61_15565 PF00263 Bacterial type II and III secretion system protein ISU61_15565 PF13629 Pilus formation protein N terminal region ISU61_15580 PF01797 Transposase IS200 like ISU61_15585 PF13953 PapC C-terminal domain ISU61_15585 PF13954 PapC N-terminal domain ISU61_15585 PF00577 Outer membrane usher protein ISU61_15590 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_15590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_15595 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU61_15595 PF00419 Fimbrial protein ISU61_15600 PF01497 Periplasmic binding protein ISU61_15620 PF01312 FlhB HrpN YscU SpaS Family ISU61_15625 PF01311 Bacterial export proteins, family 1 ISU61_15630 PF01313 Bacterial export proteins, family 3 ISU61_15635 PF00813 FliP family ISU61_15640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU61_15650 PF02954 Bacterial regulatory protein, Fis family ISU61_15650 PF00158 Sigma-54 interaction domain ISU61_15650 PF00072 Response regulator receiver domain ISU61_15655 PF02049 Flagellar hook-basal body complex protein FliE ISU61_15660 PF08345 Flagellar M-ring protein C-terminal ISU61_15660 PF01514 Secretory protein of YscJ/FliF family ISU61_15675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU61_15675 PF18269 T3SS EscN ATPase C-terminal domain ISU61_15695 PF13144 Chaperone for flagella basal body P-ring formation ISU61_15700 PF00460 Flagella basal body rod protein ISU61_15705 PF00460 Flagella basal body rod protein ISU61_15705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_15710 PF13861 FlgD Tudor-like domain ISU61_15710 PF13860 FlgD Ig-like domain ISU61_15710 PF03963 Flagellar hook capping protein - N-terminal region ISU61_15715 PF07559 Flagellar basal body protein FlaE ISU61_15715 PF00460 Flagella basal body rod protein ISU61_15715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_15720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_15720 PF00460 Flagella basal body rod protein ISU61_15725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_15725 PF00460 Flagella basal body rod protein ISU61_15730 PF02107 Flagellar L-ring protein ISU61_15735 PF02119 Flagellar P-ring protein ISU61_15745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU61_15745 PF00460 Flagella basal body rod protein ISU61_15765 PF18500 CadC C-terminal domain 1 ISU61_15765 PF00486 Transcriptional regulatory protein, C terminal ISU61_15770 PF00669 Bacterial flagellin N-terminal helical region ISU61_15770 PF00700 Bacterial flagellin C-terminal helical region ISU61_15775 PF00669 Bacterial flagellin N-terminal helical region ISU61_15775 PF00700 Bacterial flagellin C-terminal helical region ISU61_15780 PF00700 Bacterial flagellin C-terminal helical region ISU61_15780 PF00669 Bacterial flagellin N-terminal helical region ISU61_15790 PF02465 Flagellar hook-associated protein 2 N-terminus ISU61_15790 PF07196 Flagellin hook IN motif ISU61_15790 PF07195 Flagellar hook-associated protein 2 C-terminus ISU61_15815 PF04545 Sigma-70, region 4 ISU61_15815 PF04542 Sigma-70 region 2 ISU61_15820 PF01618 MotA/TolQ/ExbB proton channel family ISU61_15825 PF00691 OmpA family ISU61_15825 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU61_15870 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU61_15880 PF05638 Type VI secretion system effector, Hcp ISU61_15890 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU61_15895 PF02264 LamB porin ISU61_15900 PF17912 MalK OB fold domain ISU61_15900 PF00005 ABC transporter ISU61_15910 PF01547 Bacterial extracellular solute-binding protein ISU61_15915 PF14785 Maltose transport system permease protein MalF P2 domain ISU61_15915 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_15920 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_15925 PF06146 Phosphate-starvation-inducible E ISU61_15930 PF00342 Phosphoglucose isomerase ISU61_15935 PF00696 Amino acid kinase family ISU61_15935 PF01842 ACT domain ISU61_15945 PF05860 haemagglutination activity domain ISU61_15945 PF13332 Hemagglutinin repeat ISU61_15950 PF02607 B12 binding domain ISU61_15950 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISU61_15950 PF02310 B12 binding domain ISU61_15950 PF02574 Homocysteine S-methyltransferase ISU61_15950 PF00809 Pterin binding enzyme ISU61_15955 PF01614 Bacterial transcriptional regulator ISU61_15955 PF09339 IclR helix-turn-helix domain ISU61_15960 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU61_15965 PF00463 Isocitrate lyase family ISU61_15970 PF01274 Malate synthase ISU61_15975 PF04204 Homoserine O-succinyltransferase ISU61_15980 PF00872 Transposase, Mutator family ISU61_16015 PF01808 AICARFT/IMPCHase bienzyme ISU61_16015 PF02142 MGS-like domain ISU61_16020 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU61_16020 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU61_16020 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU61_16025 PF07356 Protein of unknown function (DUF1481) ISU61_16030 PF00216 Bacterial DNA-binding protein ISU61_16035 PF04222 Protein of unknown function (DUF416) ISU61_16040 PF04493 Endonuclease V ISU61_16045 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU61_16055 PF00293 NUDIX domain ISU61_16055 PF09297 NADH pyrophosphatase zinc ribbon domain ISU61_16060 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU61_16065 PF01964 Radical SAM ThiC family ISU61_16065 PF13667 ThiC-associated domain ISU61_16070 PF02581 Thiamine monophosphate synthase ISU61_16075 PF00899 ThiF family ISU61_16085 PF05690 Thiazole biosynthesis protein ThiG ISU61_16090 PF06968 Biotin and Thiamin Synthesis associated domain ISU61_16090 PF04055 Radical SAM superfamily ISU61_16095 PF04983 RNA polymerase Rpb1, domain 3 ISU61_16095 PF04997 RNA polymerase Rpb1, domain 1 ISU61_16095 PF00623 RNA polymerase Rpb1, domain 2 ISU61_16095 PF05000 RNA polymerase Rpb1, domain 4 ISU61_16095 PF04998 RNA polymerase Rpb1, domain 5 ISU61_16100 PF00562 RNA polymerase Rpb2, domain 6 ISU61_16100 PF04560 RNA polymerase Rpb2, domain 7 ISU61_16100 PF04561 RNA polymerase Rpb2, domain 2 ISU61_16100 PF10385 RNA polymerase beta subunit external 1 domain ISU61_16100 PF04565 RNA polymerase Rpb2, domain 3 ISU61_16100 PF04563 RNA polymerase beta subunit ISU61_16105 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU61_16105 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU61_16110 PF00466 Ribosomal protein L10 ISU61_16115 PF00687 Ribosomal protein L1p/L10e family ISU61_16120 PF03946 Ribosomal protein L11, N-terminal domain ISU61_16120 PF00298 Ribosomal protein L11, RNA binding domain ISU61_16125 PF00467 KOW motif ISU61_16125 PF02357 Transcription termination factor nusG ISU61_16130 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU61_16135 PF00009 Elongation factor Tu GTP binding domain ISU61_16135 PF03144 Elongation factor Tu domain 2 ISU61_16135 PF03143 Elongation factor Tu C-terminal domain ISU61_16160 PF01695 IstB-like ATP binding protein ISU61_16165 PF00665 Integrase core domain ISU61_16165 PF02796 Helix-turn-helix domain of resolvase ISU61_16170 PF01797 Transposase IS200 like ISU61_16175 PF00884 Sulfatase ISU61_16180 PF00455 DeoR C terminal sensor domain ISU61_16180 PF08220 DeoR-like helix-turn-helix domain ISU61_16185 PF08013 Tagatose 6 phosphate kinase ISU61_16190 PF01380 SIS domain ISU61_16195 PF03830 PTS system sorbose subfamily IIB component ISU61_16200 PF03609 PTS system sorbose-specific iic component ISU61_16205 PF03613 PTS system mannose/fructose/sorbose family IID component ISU61_16210 PF03610 PTS system fructose IIA component ISU61_16215 PF01979 Amidohydrolase family ISU61_16225 PF07470 Glycosyl Hydrolase Family 88 ISU61_16230 PF13186 Iron-sulfur cluster-binding domain ISU61_16230 PF04055 Radical SAM superfamily ISU61_16235 PF00884 Sulfatase ISU61_16245 PF01116 Fructose-bisphosphate aldolase class-II ISU61_16255 PF00356 Bacterial regulatory proteins, lacI family ISU61_16260 PF07690 Major Facilitator Superfamily ISU61_16265 PF17137 Domain of unknown function (DUF5110) ISU61_16265 PF16338 Domain of unknown function (DUF4968) ISU61_16265 PF13802 Galactose mutarotase-like ISU61_16265 PF01055 Glycosyl hydrolases family 31 ISU61_16270 PF00356 Bacterial regulatory proteins, lacI family ISU61_16275 PF02264 LamB porin ISU61_16280 PF00367 phosphotransferase system, EIIB ISU61_16280 PF02378 Phosphotransferase system, EIIC ISU61_16285 PF08532 Beta-galactosidase trimerisation domain ISU61_16285 PF08533 Beta-galactosidase C-terminal domain ISU61_16285 PF02449 Beta-galactosidase ISU61_16290 PF07745 Glycosyl hydrolase family 53 ISU61_16295 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_16300 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_16305 PF13416 Bacterial extracellular solute-binding protein ISU61_16310 PF17912 MalK OB fold domain ISU61_16310 PF00005 ABC transporter ISU61_16315 PF00005 ABC transporter ISU61_16320 PF02653 Branched-chain amino acid transport system / permease component ISU61_16325 PF13407 Periplasmic binding protein domain ISU61_16335 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU61_16340 PF03551 Transcriptional regulator PadR-like family ISU61_16430 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU61_16435 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU61_16455 PF00589 Phage integrase family ISU61_16455 PF13356 Arm DNA-binding domain ISU61_16455 PF14659 Phage integrase, N-terminal SAM-like domain ISU61_16465 PF01336 OB-fold nucleic acid binding domain ISU61_16465 PF00152 tRNA synthetases class II (D, K and N) ISU61_16475 PF17768 RecJ OB domain ISU61_16475 PF01368 DHH family ISU61_16475 PF02272 DHHA1 domain ISU61_16480 PF10411 Disulfide bond isomerase protein N-terminus ISU61_16480 PF13098 Thioredoxin-like domain ISU61_16485 PF00589 Phage integrase family ISU61_16485 PF02899 Phage integrase, N-terminal SAM-like domain ISU61_16490 PF00258 Flavodoxin ISU61_16495 PF06123 Inner membrane protein CreD ISU61_16500 PF00672 HAMP domain ISU61_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_16500 PF00512 His Kinase A (phospho-acceptor) domain ISU61_16505 PF00072 Response regulator receiver domain ISU61_16505 PF00486 Transcriptional regulatory protein, C terminal ISU61_16510 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU61_16515 PF03937 Flavinator of succinate dehydrogenase ISU61_16520 PF01571 Aminomethyltransferase folate-binding domain ISU61_16530 PF03006 Haemolysin-III related ISU61_16560 PF02347 Glycine cleavage system P-protein ISU61_16565 PF01597 Glycine cleavage H-protein ISU61_16570 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU61_16570 PF01571 Aminomethyltransferase folate-binding domain ISU61_16575 PF01494 FAD binding domain ISU61_16580 PF01494 FAD binding domain ISU61_16585 PF05195 Aminopeptidase P, N-terminal domain ISU61_16585 PF00557 Metallopeptidase family M24 ISU61_16590 PF03695 Uncharacterised protein family (UPF0149) ISU61_16595 PF05164 Cell division protein ZapA ISU61_16605 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU61_16615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU61_16615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU61_16615 PF01842 ACT domain ISU61_16620 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU61_16625 PF03466 LysR substrate binding domain ISU61_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_16630 PF04402 Protein of unknown function (DUF541) ISU61_16635 PF01810 LysE type translocator ISU61_16640 PF05552 Conserved TM helix ISU61_16640 PF00924 Mechanosensitive ion channel ISU61_16650 PF01116 Fructose-bisphosphate aldolase class-II ISU61_16655 PF00162 Phosphoglycerate kinase ISU61_16660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU61_16660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU61_16665 PF01797 Transposase IS200 like ISU61_16670 PF02779 Transketolase, pyrimidine binding domain ISU61_16670 PF00456 Transketolase, thiamine diphosphate binding domain ISU61_16670 PF02780 Transketolase, C-terminal domain ISU61_16675 PF01435 Peptidase family M48 ISU61_16685 PF00355 Rieske [2Fe-2S] domain ISU61_16690 PF17944 Arginine decarboxylase C-terminal helical extension ISU61_16690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU61_16690 PF17810 Arginine decarboxylase helical bundle domain ISU61_16695 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU61_16695 PF02772 S-adenosylmethionine synthetase, central domain ISU61_16695 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU61_16700 PF17283 SprT-like zinc ribbon domain ISU61_16700 PF10263 SprT-like family ISU61_16705 PF04231 Endonuclease I ISU61_16710 PF04452 RNA methyltransferase ISU61_16715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU61_16715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU61_16720 PF02622 Uncharacterized ACR, COG1678 ISU61_16725 PF03652 Holliday junction resolvase ISU61_16730 PF00795 Carbon-nitrogen hydrolase ISU61_16735 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU61_16740 PF00437 Type II/IV secretion system protein ISU61_16745 PF01168 Alanine racemase, N-terminal domain ISU61_16750 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU61_16750 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU61_16755 PF02325 YGGT family ISU61_16760 PF02594 Uncharacterised ACR, YggU family COG1872 ISU61_16765 PF01725 Ham1 family ISU61_16770 PF06969 HemN C-terminal domain ISU61_16770 PF04055 Radical SAM superfamily ISU61_16775 PF00872 Transposase, Mutator family ISU61_16785 PF11101 Protein of unknown function (DUF2884) ISU61_16790 PF11101 Protein of unknown function (DUF2884) ISU61_16795 PF04960 Glutaminase ISU61_16800 PF04320 Protein with unknown function (DUF469) ISU61_16805 PF02390 Putative methyltransferase ISU61_16810 PF10576 Iron-sulfur binding domain of endonuclease III ISU61_16810 PF14815 NUDIX domain ISU61_16810 PF00633 Helix-hairpin-helix motif ISU61_16810 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU61_16815 PF04362 Bacterial Fe(2+) trafficking ISU61_16820 PF01464 Transglycosylase SLT domain ISU61_16820 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU61_16830 PF07715 TonB-dependent Receptor Plug Domain ISU61_16835 PF02653 Branched-chain amino acid transport system / permease component ISU61_16840 PF00005 ABC transporter ISU61_16845 PF13407 Periplasmic binding protein domain ISU61_16850 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU61_16850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU61_16850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU61_16910 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU61_16910 PF04717 Type VI secretion system, phage-baseplate injector ISU61_16910 PF13296 Putative type VI secretion system Rhs element Vgr ISU61_16915 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_16915 PF07724 AAA domain (Cdc48 subfamily) ISU61_16915 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_16915 PF17871 AAA lid domain ISU61_16940 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU61_16960 PF02517 CPBP intramembrane metalloprotease ISU61_16965 PF00765 Autoinducer synthase ISU61_16970 PF03472 Autoinducer binding domain ISU61_16970 PF00196 Bacterial regulatory proteins, luxR family ISU61_17005 PF06276 Ferric iron reductase FhuF-like transporter ISU61_17005 PF04183 IucA / IucC family ISU61_17010 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU61_17015 PF07715 TonB-dependent Receptor Plug Domain ISU61_17015 PF00593 TonB dependent receptor ISU61_17030 PF00356 Bacterial regulatory proteins, lacI family ISU61_17035 PF00939 Sodium:sulfate symporter transmembrane region ISU61_17050 PF05593 RHS Repeat ISU61_17050 PF03527 RHS protein ISU61_17060 PF04717 Type VI secretion system, phage-baseplate injector ISU61_17065 PF12951 Passenger-associated-transport-repeat ISU61_17075 PF02447 GntP family permease ISU61_17090 PF00005 ABC transporter ISU61_17090 PF00664 ABC transporter transmembrane region ISU61_17100 PF01695 IstB-like ATP binding protein ISU61_17105 PF00665 Integrase core domain ISU61_17105 PF02796 Helix-turn-helix domain of resolvase ISU61_17120 PF00975 Thioesterase domain ISU61_17135 PF00668 Condensation domain ISU61_17135 PF00501 AMP-binding enzyme ISU61_17135 PF08242 Methyltransferase domain ISU61_17135 PF00550 Phosphopantetheine attachment site ISU61_17140 PF00501 AMP-binding enzyme ISU61_17140 PF13193 AMP-binding enzyme C-terminal domain ISU61_17140 PF00668 Condensation domain ISU61_17145 PF00501 AMP-binding enzyme ISU61_17145 PF00668 Condensation domain ISU61_17145 PF08242 Methyltransferase domain ISU61_17145 PF00550 Phosphopantetheine attachment site ISU61_17150 PF00593 TonB dependent receptor ISU61_17150 PF07715 TonB-dependent Receptor Plug Domain ISU61_17155 PF07687 Peptidase dimerisation domain ISU61_17155 PF01546 Peptidase family M20/M25/M40 ISU61_17160 PF03806 AbgT putative transporter family ISU61_17165 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU61_17165 PF12468 Type III secretion system leucine rich repeat protein ISU61_17170 PF12468 Type III secretion system leucine rich repeat protein ISU61_17170 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU61_17170 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU61_17170 PF12468 Type III secretion system leucine rich repeat protein ISU61_17180 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU61_17180 PF12468 Type III secretion system leucine rich repeat protein ISU61_17185 PF03797 Autotransporter beta-domain ISU61_17195 PF07906 ShET2 enterotoxin, N-terminal region ISU61_17200 PF00873 AcrB/AcrD/AcrF family ISU61_17205 PF00529 HlyD membrane-fusion protein of T1SS ISU61_17205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_17210 PF08448 PAS fold ISU61_17210 PF08447 PAS fold ISU61_17210 PF00563 EAL domain ISU61_17210 PF00990 Diguanylate cyclase, GGDEF domain ISU61_17240 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU61_17250 PF07724 AAA domain (Cdc48 subfamily) ISU61_17250 PF17871 AAA lid domain ISU61_17250 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_17250 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_17285 PF04717 Type VI secretion system, phage-baseplate injector ISU61_17300 PF05593 RHS Repeat ISU61_17300 PF03527 RHS protein ISU61_17330 PF04717 Type VI secretion system, phage-baseplate injector ISU61_17340 PF05593 RHS Repeat ISU61_17340 PF03527 RHS protein ISU61_17360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU61_17360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU61_17365 PF02311 AraC-like ligand binding domain ISU61_17365 PF12833 Helix-turn-helix domain ISU61_17370 PF05025 RbsD / FucU transport protein family ISU61_17375 PF00294 pfkB family carbohydrate kinase ISU61_17380 PF01791 DeoC/LacD family aldolase ISU61_17385 PF03358 NADPH-dependent FMN reductase ISU61_17395 PF00296 Luciferase-like monooxygenase ISU61_17400 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_17405 PF00005 ABC transporter ISU61_17415 PF04221 RelB antitoxin ISU61_17420 PF00860 Permease family ISU61_17425 PF00999 Sodium/hydrogen exchanger family ISU61_17435 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU61_17445 PF00005 ABC transporter ISU61_17450 PF02653 Branched-chain amino acid transport system / permease component ISU61_17460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_17460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_17465 PF00571 CBS domain ISU61_17465 PF01380 SIS domain ISU61_17470 PF02798 Glutathione S-transferase, N-terminal domain ISU61_17485 PF01797 Transposase IS200 like ISU61_17490 PF00313 'Cold-shock' DNA-binding domain ISU61_17495 PF00313 'Cold-shock' DNA-binding domain ISU61_17500 PF05433 Glycine zipper 2TM domain ISU61_17505 PF00753 Metallo-beta-lactamase superfamily ISU61_17510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU61_17510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU61_17515 PF02627 Carboxymuconolactone decarboxylase family ISU61_17520 PF07690 Major Facilitator Superfamily ISU61_17545 PF02954 Bacterial regulatory protein, Fis family ISU61_17550 PF01207 Dihydrouridine synthase (Dus) ISU61_17560 PF00474 Sodium:solute symporter family ISU61_17565 PF06196 Protein of unknown function (DUF997) ISU61_17575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU61_17575 PF02785 Biotin carboxylase C-terminal domain ISU61_17575 PF00289 Biotin carboxylase, N-terminal domain ISU61_17580 PF00364 Biotin-requiring enzyme ISU61_17585 PF01220 Dehydroquinase class II ISU61_17590 PF01794 Ferric reductase like transmembrane component ISU61_17595 PF00174 Oxidoreductase molybdopterin binding domain ISU61_17600 PF00107 Zinc-binding dehydrogenase ISU61_17600 PF08240 Alcohol dehydrogenase GroES-like domain ISU61_17605 PF00563 EAL domain ISU61_17605 PF00990 Diguanylate cyclase, GGDEF domain ISU61_17605 PF17157 Gammaproteobacterial periplasmic sensor domain ISU61_17615 PF04085 rod shape-determining protein MreC ISU61_17620 PF04093 rod shape-determining protein MreD ISU61_17625 PF02545 Maf-like protein ISU61_17630 PF10150 Ribonuclease E/G family ISU61_17630 PF00575 S1 RNA binding domain ISU61_17635 PF13116 Protein of unknown function ISU61_17635 PF13502 AsmA-like C-terminal region ISU61_17640 PF00795 Carbon-nitrogen hydrolase ISU61_17645 PF01523 Putative modulator of DNA gyrase ISU61_17650 PF14431 YwqJ-like deaminase ISU61_17650 PF18807 Tripartite Tc toxins repeat ISU61_17655 PF18807 Tripartite Tc toxins repeat ISU61_17655 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU61_17675 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU61_17675 PF03534 Salmonella virulence plasmid 65kDa B protein ISU61_17675 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU61_17680 PF18413 Neuraminidase-like domain ISU61_17680 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU61_17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_17690 PF03466 LysR substrate binding domain ISU61_17695 PF03466 LysR substrate binding domain ISU61_17695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_17700 PF07869 Protein of unknown function (DUF1656) ISU61_17705 PF13533 Biotin-lipoyl like ISU61_17710 PF04632 Fusaric acid resistance protein family ISU61_17725 PF01337 Barstar (barnase inhibitor) ISU61_17730 PF04751 Protein of unknown function (DUF615) ISU61_17735 PF01523 Putative modulator of DNA gyrase ISU61_17745 PF07361 Cytochrome b562 ISU61_17750 PF14760 Rnk N-terminus ISU61_17750 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU61_17755 PF00128 Alpha amylase, catalytic domain ISU61_17755 PF11941 Domain of unknown function (DUF3459) ISU61_17760 PF00367 phosphotransferase system, EIIB ISU61_17760 PF02378 Phosphotransferase system, EIIC ISU61_17765 PF00356 Bacterial regulatory proteins, lacI family ISU61_17775 PF01042 Endoribonuclease L-PSP ISU61_17780 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU61_17780 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU61_17785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU61_17785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU61_17790 PF00381 PTS HPr component phosphorylation site ISU61_17795 PF03668 P-loop ATPase protein family ISU61_17800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU61_17810 PF04963 Sigma-54 factor, core binding domain ISU61_17810 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU61_17810 PF04552 Sigma-54, DNA binding domain ISU61_17815 PF00005 ABC transporter ISU61_17815 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU61_17820 PF03968 OstA-like protein ISU61_17825 PF06835 Lipopolysaccharide-assembly, LptC-related ISU61_17835 PF01380 SIS domain ISU61_17835 PF00571 CBS domain ISU61_17840 PF01699 Sodium/calcium exchanger protein ISU61_17845 PF00005 ABC transporter ISU61_17850 PF02405 Permease MlaE ISU61_17855 PF02470 MlaD protein ISU61_17860 PF05494 MlaC protein ISU61_17865 PF13466 STAS domain ISU61_17870 PF01722 BolA-like protein ISU61_17875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU61_17880 PF13180 PDZ domain ISU61_17885 PF01797 Transposase IS200 like ISU61_17890 PF08502 LeuA allosteric (dimerisation) domain ISU61_17890 PF00682 HMGL-like ISU61_17895 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU61_17900 PF00330 Aconitase family (aconitate hydratase) ISU61_17910 PF01695 IstB-like ATP binding protein ISU61_17915 PF02796 Helix-turn-helix domain of resolvase ISU61_17915 PF00665 Integrase core domain ISU61_17925 PF07690 Major Facilitator Superfamily ISU61_17930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU61_17930 PF12793 Sugar transport-related sRNA regulator N-term ISU61_17940 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_17945 PF00005 ABC transporter ISU61_17950 PF09335 SNARE associated Golgi protein ISU61_17955 PF03104 DNA polymerase family B, exonuclease domain ISU61_17955 PF00136 DNA polymerase family B ISU61_17960 PF00271 Helicase conserved C-terminal domain ISU61_17960 PF12137 RNA polymerase recycling family C-terminal ISU61_17960 PF18339 RapA N-terminal Tudor like domain 1 ISU61_17960 PF18337 RapA N-terminal Tudor like domain ISU61_17960 PF00176 SNF2 family N-terminal domain ISU61_17975 PF00691 OmpA family ISU61_17975 PF05736 OprF membrane domain ISU61_17980 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU61_18010 PF06715 Gp5 C-terminal repeat (3 copies) ISU61_18010 PF04717 Type VI secretion system, phage-baseplate injector ISU61_18015 PF17871 AAA lid domain ISU61_18015 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_18015 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_18015 PF07724 AAA domain (Cdc48 subfamily) ISU61_18025 PF05947 Type VI secretion system, TssF ISU61_18040 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU61_18045 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU61_18060 PF00849 RNA pseudouridylate synthase ISU61_18065 PF05099 Tellurite resistance protein TerB ISU61_18065 PF00226 DnaJ domain ISU61_18070 PF03968 OstA-like protein ISU61_18070 PF04453 LPS transport system D ISU61_18075 PF00639 PPIC-type PPIASE domain ISU61_18075 PF09312 SurA N-terminal domain ISU61_18080 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU61_18085 PF00398 Ribosomal RNA adenine dimethylase ISU61_18090 PF04379 ApaG domain ISU61_18095 PF00149 Calcineurin-like phosphoesterase ISU61_18110 PF00186 Dihydrofolate reductase ISU61_18115 PF12821 Threonine/Serine exporter, ThrE ISU61_18120 PF06738 Putative threonine/serine exporter ISU61_18125 PF01810 LysE type translocator ISU61_18130 PF02142 MGS-like domain ISU61_18130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU61_18130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU61_18135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU61_18135 PF00117 Glutamine amidotransferase class-I ISU61_18140 PF01113 Dihydrodipicolinate reductase, N-terminus ISU61_18140 PF05173 Dihydrodipicolinate reductase, C-terminus ISU61_18145 PF01797 Transposase IS200 like ISU61_18150 PF02401 LytB protein ISU61_18155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU61_18160 PF01252 Signal peptidase (SPase) II ISU61_18165 PF08264 Anticodon-binding domain of tRNA ISU61_18165 PF00133 tRNA synthetases class I (I, L, M and V) ISU61_18165 PF06827 Zinc finger found in FPG and IleRS ISU61_18170 PF06574 FAD synthetase ISU61_18170 PF01687 Riboflavin kinase ISU61_18175 PF01649 Ribosomal protein S20 ISU61_18180 PF03466 LysR substrate binding domain ISU61_18180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_18185 PF06965 Na+/H+ antiporter 1 ISU61_18190 PF00684 DnaJ central domain ISU61_18190 PF01556 DnaJ C terminal domain ISU61_18190 PF00226 DnaJ domain ISU61_18195 PF00012 Hsp70 protein ISU61_18200 PF01184 GPR1/FUN34/yaaH family ISU61_18210 PF07690 Major Facilitator Superfamily ISU61_18215 PF00994 Probable molybdopterin binding domain ISU61_18220 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU61_18230 PF03883 Peroxide stress protein YaaA ISU61_18235 PF14821 Threonine synthase N terminus ISU61_18235 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_18240 PF08544 GHMP kinases C terminal ISU61_18240 PF00288 GHMP kinases N terminal domain ISU61_18245 PF03447 Homoserine dehydrogenase, NAD binding domain ISU61_18245 PF00696 Amino acid kinase family ISU61_18245 PF01842 ACT domain ISU61_18245 PF13840 ACT domain ISU61_18245 PF00742 Homoserine dehydrogenase ISU61_18250 PF08254 Threonine leader peptide ISU61_18255 PF00486 Transcriptional regulatory protein, C terminal ISU61_18255 PF00072 Response regulator receiver domain ISU61_18260 PF05981 CreA protein ISU61_18265 PF12833 Helix-turn-helix domain ISU61_18265 PF06445 GyrI-like small molecule binding domain ISU61_18270 PF00300 Histidine phosphatase superfamily (branch 1) ISU61_18275 PF01931 Protein of unknown function DUF84 ISU61_18280 PF01371 Trp repressor protein ISU61_18285 PF14718 Soluble lytic murein transglycosylase L domain ISU61_18285 PF01464 Transglycosylase SLT domain ISU61_18290 PF00689 Cation transporting ATPase, C-terminus ISU61_18290 PF00690 Cation transporter/ATPase, N-terminus ISU61_18300 PF17152 Periplasmic sensor domain ISU61_18300 PF00990 Diguanylate cyclase, GGDEF domain ISU61_18305 PF00691 OmpA family ISU61_18310 PF00005 ABC transporter ISU61_18310 PF12848 ABC transporter ISU61_18315 PF02661 Fic/DOC family ISU61_18320 PF13521 AAA domain ISU61_18320 PF01381 Helix-turn-helix ISU61_18325 PF18073 Rubredoxin metal binding domain ISU61_18330 PF18429 Domain of unknown function (DUF5609) ISU61_18335 PF10144 Bacterial virulence factor haemolysin ISU61_18340 PF01048 Phosphorylase superfamily ISU61_18345 PF01676 Metalloenzyme superfamily ISU61_18350 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ISU61_18350 PF00591 Glycosyl transferase family, a/b domain ISU61_18350 PF02885 Glycosyl transferase family, helical bundle domain ISU61_18355 PF01791 DeoC/LacD family aldolase ISU61_18360 PF07670 Nucleoside recognition ISU61_18360 PF07662 Na+ dependent nucleoside transporter C-terminus ISU61_18360 PF01773 Na+ dependent nucleoside transporter N-terminus ISU61_18365 PF01026 TatD related DNase ISU61_18370 PF01734 Patatin-like phospholipase ISU61_18375 PF07043 Protein of unknown function (DUF1328) ISU61_18380 PF04972 BON domain ISU61_18385 PF16658 Class II release factor RF3, C-terminal domain ISU61_18385 PF03144 Elongation factor Tu domain 2 ISU61_18385 PF00009 Elongation factor Tu GTP binding domain ISU61_18390 PF00583 Acetyltransferase (GNAT) family ISU61_18395 PF03603 DNA polymerase III psi subunit ISU61_18400 PF05175 Methyltransferase small domain ISU61_18400 PF08468 Methyltransferase small domain N-terminal ISU61_18410 PF07256 Protein of unknown function (DUF1435) ISU61_18415 PF00990 Diguanylate cyclase, GGDEF domain ISU61_18420 PF01095 Pectinesterase ISU61_18435 PF00873 AcrB/AcrD/AcrF family ISU61_18440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_18455 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU61_18460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_18460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_18465 PF00325 Bacterial regulatory proteins, crp family ISU61_18465 PF04198 Putative sugar-binding domain ISU61_18475 PF00005 ABC transporter ISU61_18480 PF02653 Branched-chain amino acid transport system / permease component ISU61_18485 PF02653 Branched-chain amino acid transport system / permease component ISU61_18490 PF13407 Periplasmic binding protein domain ISU61_18495 PF01791 DeoC/LacD family aldolase ISU61_18500 PF03992 Antibiotic biosynthesis monooxygenase ISU61_18505 PF10696 Protein of unknown function (DUF2501) ISU61_18510 PF02896 PEP-utilising enzyme, TIM barrel domain ISU61_18510 PF00391 PEP-utilising enzyme, mobile domain ISU61_18510 PF05524 PEP-utilising enzyme, N-terminal ISU61_18510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU61_18510 PF00381 PTS HPr component phosphorylation site ISU61_18520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU61_18525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU61_18530 PF12833 Helix-turn-helix domain ISU61_18540 PF05987 Bacterial protein of unknown function (DUF898) ISU61_18580 PF01555 DNA methylase ISU61_18595 PF12102 Domain of unknown function (DUF3578) ISU61_18595 PF07728 AAA domain (dynein-related subfamily) ISU61_18600 PF00665 Integrase core domain ISU61_18600 PF02796 Helix-turn-helix domain of resolvase ISU61_18605 PF01695 IstB-like ATP binding protein ISU61_18610 PF00293 NUDIX domain ISU61_18620 PF07516 SecA Wing and Scaffold domain ISU61_18620 PF01043 SecA preprotein cross-linking domain ISU61_18620 PF07517 SecA DEAD-like domain ISU61_18620 PF02810 SEC-C motif ISU61_18625 PF06558 Secretion monitor precursor protein (SecM) ISU61_18635 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU61_18640 PF12327 FtsZ family, C-terminal domain ISU61_18640 PF00091 Tubulin/FtsZ family, GTPase domain ISU61_18645 PF02491 SHS2 domain inserted in FTSA ISU61_18650 PF03799 Cell division protein FtsQ ISU61_18650 PF08478 POTRA domain, FtsQ-type ISU61_18655 PF01820 D-ala D-ala ligase N-terminus ISU61_18655 PF07478 D-ala D-ala ligase C-terminus ISU61_18660 PF01225 Mur ligase family, catalytic domain ISU61_18660 PF02875 Mur ligase family, glutamate ligase domain ISU61_18660 PF08245 Mur ligase middle domain ISU61_18665 PF03033 Glycosyltransferase family 28 N-terminal domain ISU61_18665 PF04101 Glycosyltransferase family 28 C-terminal domain ISU61_18670 PF01098 Cell cycle protein ISU61_18675 PF02875 Mur ligase family, glutamate ligase domain ISU61_18675 PF08245 Mur ligase middle domain ISU61_18680 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU61_18680 PF00953 Glycosyl transferase family 4 ISU61_18685 PF02875 Mur ligase family, glutamate ligase domain ISU61_18685 PF01225 Mur ligase family, catalytic domain ISU61_18685 PF08245 Mur ligase middle domain ISU61_18690 PF08245 Mur ligase middle domain ISU61_18690 PF02875 Mur ligase family, glutamate ligase domain ISU61_18690 PF01225 Mur ligase family, catalytic domain ISU61_18695 PF03717 Penicillin-binding Protein dimerisation domain ISU61_18695 PF00905 Penicillin binding protein transpeptidase domain ISU61_18700 PF04999 Cell division protein FtsL ISU61_18705 PF01795 MraW methylase family ISU61_18710 PF02381 MraZ protein, putative antitoxin-like ISU61_18720 PF06610 L-alanine exporter ISU61_18725 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU61_18725 PF00356 Bacterial regulatory proteins, lacI family ISU61_18730 PF01797 Transposase IS200 like ISU61_18735 PF10369 Small subunit of acetolactate synthase ISU61_18740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU61_18740 PF00205 Thiamine pyrophosphate enzyme, central domain ISU61_18740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU61_18745 PF00501 AMP-binding enzyme ISU61_18750 PF03466 LysR substrate binding domain ISU61_18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_18760 PF01797 Transposase IS200 like ISU61_18765 PF00595 PDZ domain ISU61_18765 PF13180 PDZ domain ISU61_18770 PF06295 Protein of unknown function (DUF1043) ISU61_18775 PF03969 AFG1-like ATPase ISU61_18780 PF00572 Ribosomal protein L13 ISU61_18785 PF00380 Ribosomal protein S9/S16 ISU61_18795 PF02798 Glutathione S-transferase, N-terminal domain ISU61_18795 PF00043 Glutathione S-transferase, C-terminal domain ISU61_18800 PF04386 Stringent starvation protein B ISU61_18810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU61_18810 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_18815 PF01645 Conserved region in glutamate synthase ISU61_18815 PF01493 GXGXG motif ISU61_18815 PF00310 Glutamine amidotransferases class-II ISU61_18815 PF04898 Glutamate synthase central domain ISU61_18820 PF16199 Radical_SAM C-terminal domain ISU61_18820 PF04055 Radical SAM superfamily ISU61_18825 PF01627 Hpt domain ISU61_18825 PF00989 PAS fold ISU61_18825 PF00072 Response regulator receiver domain ISU61_18825 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU61_18825 PF00512 His Kinase A (phospho-acceptor) domain ISU61_18825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_18835 PF00912 Transglycosylase ISU61_18840 PF04972 BON domain ISU61_18845 PF13580 SIS domain ISU61_18850 PF02021 Uncharacterised protein family UPF0102 ISU61_18855 PF04348 LppC putative lipoprotein ISU61_18860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU61_18870 PF02678 Pirin ISU61_18870 PF17954 Quercetinase C-terminal cupin domain ISU61_18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_18875 PF03466 LysR substrate binding domain ISU61_18885 PF01695 IstB-like ATP binding protein ISU61_18890 PF02796 Helix-turn-helix domain of resolvase ISU61_18890 PF00665 Integrase core domain ISU61_18900 PF00902 Sec-independent protein translocase protein (TatC) ISU61_18910 PF02416 mttA/Hcf106 family ISU61_18915 PF03109 ABC1 family ISU61_18920 PF02036 SCP-2 sterol transfer family ISU61_18925 PF01209 ubiE/COQ5 methyltransferase family ISU61_18930 PF02646 RmuC family ISU61_18935 PF09335 SNARE associated Golgi protein ISU61_18940 PF13722 5TM C-terminal transporter carbon starvation CstA ISU61_18940 PF02554 Carbon starvation protein CstA ISU61_18950 PF01048 Phosphorylase superfamily ISU61_18955 PF01738 Dienelactone hydrolase family ISU61_18960 PF01717 Cobalamin-independent synthase, Catalytic domain ISU61_18960 PF08267 Cobalamin-independent synthase, N-terminal domain ISU61_18965 PF03466 LysR substrate binding domain ISU61_18965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_18970 PF00892 EamA-like transporter family ISU61_18975 PF03547 Membrane transport protein ISU61_18980 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU61_18985 PF17912 MalK OB fold domain ISU61_18985 PF00005 ABC transporter ISU61_18990 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_18995 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_19000 PF13416 Bacterial extracellular solute-binding protein ISU61_19040 PF00005 ABC transporter ISU61_19045 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU61_19045 PF00005 ABC transporter ISU61_19050 PF02653 Branched-chain amino acid transport system / permease component ISU61_19050 PF11862 Domain of unknown function (DUF3382) ISU61_19055 PF02653 Branched-chain amino acid transport system / permease component ISU61_19060 PF13458 Periplasmic binding protein ISU61_19065 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU61_19070 PF01797 Transposase IS200 like ISU61_19075 PF00140 Sigma-70 factor, region 1.2 ISU61_19075 PF04542 Sigma-70 region 2 ISU61_19075 PF04545 Sigma-70, region 4 ISU61_19080 PF02687 FtsX-like permease family ISU61_19080 PF18075 FtsX extracellular domain ISU61_19085 PF00005 ABC transporter ISU61_19090 PF02881 SRP54-type protein, helical bundle domain ISU61_19090 PF02881 SRP54-type protein, helical bundle domain ISU61_19090 PF00448 SRP54-type protein, GTPase domain ISU61_19090 PF00448 SRP54-type protein, GTPase domain ISU61_19100 PF06611 Protein of unknown function (DUF1145) ISU61_19115 PF07947 YhhN family ISU61_19120 PF00403 Heavy-metal-associated domain ISU61_19125 PF01206 Sulfurtransferase TusA ISU61_19130 PF02592 Putative vitamin uptake transporter ISU61_19135 PF08786 DcrB ISU61_19140 PF02754 Cysteine-rich domain ISU61_19140 PF13183 4Fe-4S dicluster domain ISU61_19145 PF00890 FAD binding domain ISU61_19150 PF04324 BFD-like [2Fe-2S] binding domain ISU61_19150 PF01266 FAD dependent oxidoreductase ISU61_19155 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU61_19170 PF12146 Serine aminopeptidase, S33 ISU61_19175 PF01810 LysE type translocator ISU61_19180 PF01810 LysE type translocator ISU61_19185 PF09382 RQC domain ISU61_19185 PF16124 RecQ zinc-binding ISU61_19185 PF00570 HRDC domain ISU61_19185 PF00270 DEAD/DEAH box helicase ISU61_19185 PF00271 Helicase conserved C-terminal domain ISU61_19190 PF02253 Phospholipase A1 ISU61_19195 PF03061 Thioesterase superfamily ISU61_19200 PF00892 EamA-like transporter family ISU61_19205 PF01544 CorA-like Mg2+ transporter protein ISU61_19210 PF09370 Phosphoenolpyruvate hydrolase-like ISU61_19225 PF00580 UvrD/REP helicase N-terminal domain ISU61_19225 PF13361 UvrD-like helicase C-terminal domain ISU61_19230 PF13419 Haloacid dehalogenase-like hydrolase ISU61_19235 PF00589 Phage integrase family ISU61_19235 PF02899 Phage integrase, N-terminal SAM-like domain ISU61_19240 PF04340 Protein of unknown function, DUF484 ISU61_19245 PF01678 Diaminopimelate epimerase ISU61_19250 PF13627 Prokaryotic lipoprotein-attachment site ISU61_19255 PF01491 Frataxin-like domain ISU61_19260 PF12633 Adenylate cyclase NT domain ISU61_19260 PF01295 Adenylate cyclase, class-I ISU61_19270 PF03900 Porphobilinogen deaminase, C-terminal domain ISU61_19270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU61_19275 PF02602 Uroporphyrinogen-III synthase HemD ISU61_19280 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU61_19285 PF07219 HemY protein N-terminus ISU61_19285 PF07719 Tetratricopeptide repeat ISU61_19290 PF01797 Transposase IS200 like ISU61_19315 PF00324 Amino acid permease ISU61_19320 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU61_19325 PF06899 WzyE protein, O-antigen assembly polymerase ISU61_19330 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU61_19335 PF01943 Polysaccharide biosynthesis protein ISU61_19340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU61_19350 PF00483 Nucleotidyl transferase ISU61_19355 PF16363 GDP-mannose 4,6 dehydratase ISU61_19360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU61_19360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU61_19360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU61_19365 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU61_19370 PF02706 Chain length determinant protein ISU61_19375 PF00953 Glycosyl transferase family 4 ISU61_19380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU61_19380 PF07497 Rho termination factor, RNA-binding domain ISU61_19380 PF07498 Rho termination factor, N-terminal domain ISU61_19385 PF00085 Thioredoxin ISU61_19390 PF00270 DEAD/DEAH box helicase ISU61_19390 PF00271 Helicase conserved C-terminal domain ISU61_19395 PF02541 Ppx/GppA phosphatase family ISU61_19400 PF00580 UvrD/REP helicase N-terminal domain ISU61_19400 PF13361 UvrD-like helicase C-terminal domain ISU61_19425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_19425 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_19430 PF13954 PapC N-terminal domain ISU61_19430 PF00577 Outer membrane usher protein ISU61_19430 PF13953 PapC C-terminal domain ISU61_19440 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU61_19440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU61_19445 PF01320 Colicin immunity protein / pyocin immunity protein ISU61_19470 PF00665 Integrase core domain ISU61_19470 PF02796 Helix-turn-helix domain of resolvase ISU61_19475 PF01695 IstB-like ATP binding protein ISU61_19485 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU61_19485 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU61_19490 PF03466 LysR substrate binding domain ISU61_19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_19520 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU61_19520 PF00291 Pyridoxal-phosphate dependent enzyme ISU61_19525 PF00920 Dehydratase family ISU61_19530 PF01063 Amino-transferase class IV ISU61_19540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU61_19540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU61_19540 PF00205 Thiamine pyrophosphate enzyme, central domain ISU61_19545 PF08046 IlvGEDA operon leader peptide ISU61_19550 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU61_19550 PF01078 Magnesium chelatase, subunit ChlI ISU61_19555 PF04219 Protein of unknown function, DUF ISU61_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_19560 PF03466 LysR substrate binding domain ISU61_19565 PF02653 Branched-chain amino acid transport system / permease component ISU61_19570 PF02653 Branched-chain amino acid transport system / permease component ISU61_19575 PF00005 ABC transporter ISU61_19580 PF13407 Periplasmic binding protein domain ISU61_19615 PF01177 Asp/Glu/Hydantoin racemase ISU61_19620 PF00593 TonB dependent receptor ISU61_19620 PF07715 TonB-dependent Receptor Plug Domain ISU61_19625 PF05958 tRNA (Uracil-5-)-methyltransferase ISU61_19630 PF07226 Protein of unknown function (DUF1422) ISU61_19635 PF00440 Bacterial regulatory proteins, tetR family ISU61_19640 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_19640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU61_19645 PF03466 LysR substrate binding domain ISU61_19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_19650 PF08534 Redoxin ISU61_19650 PF00462 Glutaredoxin ISU61_19655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU61_19655 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU61_19660 PF03544 Gram-negative bacterial TonB protein C-terminal ISU61_19665 PF00529 HlyD membrane-fusion protein of T1SS ISU61_19670 PF00664 ABC transporter transmembrane region ISU61_19670 PF00005 ABC transporter ISU61_19680 PF00593 TonB dependent receptor ISU61_19680 PF07715 TonB-dependent Receptor Plug Domain ISU61_19685 PF14698 Argininosuccinate lyase C-terminal ISU61_19685 PF00206 Lyase ISU61_19690 PF00696 Amino acid kinase family ISU61_19695 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU61_19695 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU61_19700 PF01546 Peptidase family M20/M25/M40 ISU61_19700 PF07687 Peptidase dimerisation domain ISU61_19705 PF00311 Phosphoenolpyruvate carboxylase ISU61_19715 PF02219 Methylenetetrahydrofolate reductase ISU61_19720 PF00696 Amino acid kinase family ISU61_19720 PF00742 Homoserine dehydrogenase ISU61_19720 PF03447 Homoserine dehydrogenase, NAD binding domain ISU61_19725 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU61_19730 PF01340 Met Apo-repressor, MetJ ISU61_19735 PF05360 yiaA/B two helix domain ISU61_19740 PF01197 Ribosomal protein L31 ISU61_19745 PF00270 DEAD/DEAH box helicase ISU61_19745 PF18074 Primosomal protein N C-terminal domain ISU61_19745 PF00271 Helicase conserved C-terminal domain ISU61_19745 PF17764 3′ DNA-binding domain (3′BD) ISU61_19745 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU61_19750 PF00356 Bacterial regulatory proteins, lacI family ISU61_19755 PF05036 Sporulation related domain ISU61_19760 PF00227 Proteasome subunit ISU61_19765 PF00004 ATPase family associated with various cellular activities (AAA) ISU61_19765 PF07724 AAA domain (Cdc48 subfamily) ISU61_19765 PF10431 C-terminal, D2-small domain, of ClpB protein ISU61_19770 PF01040 UbiA prenyltransferase family ISU61_19775 PF03737 Aldolase/RraA ISU61_19790 PF00529 HlyD membrane-fusion protein of T1SS ISU61_19790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU61_19795 PF00005 ABC transporter ISU61_19795 PF03412 Peptidase C39 family ISU61_19795 PF00664 ABC transporter transmembrane region ISU61_19800 PF01797 Transposase IS200 like ISU61_19805 PF06005 Cell division protein ZapB ISU61_19810 PF00230 Major intrinsic protein ISU61_19815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU61_19815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU61_19820 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU61_19825 PF00970 Oxidoreductase FAD-binding domain ISU61_19825 PF00175 Oxidoreductase NAD-binding domain ISU61_19830 PF05656 Protein of unknown function (DUF805) ISU61_19835 PF07305 Protein of unknown function (DUF1454) ISU61_19840 PF00121 Triosephosphate isomerase ISU61_19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU61_19845 PF03466 LysR substrate binding domain ISU61_19850 PF02585 GlcNAc-PI de-N-acetylase ISU61_19855 PF03737 Aldolase/RraA ISU61_19860 PF00939 Sodium:sulfate symporter transmembrane region ISU61_19875 PF00365 Phosphofructokinase ISU61_19880 PF16916 Dimerisation domain of Zinc Transporter ISU61_19880 PF01545 Cation efflux family ISU61_19885 PF04754 Putative transposase, YhgA-like ISU61_19895 PF07813 LTXXQ motif family protein ISU61_19900 PF00072 Response regulator receiver domain ISU61_19900 PF00486 Transcriptional regulatory protein, C terminal ISU61_19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_19905 PF00672 HAMP domain ISU61_19905 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU61_19905 PF00512 His Kinase A (phospho-acceptor) domain ISU61_19910 PF12833 Helix-turn-helix domain ISU61_19910 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU61_19910 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU61_19910 PF02805 Metal binding domain of Ada ISU61_19915 PF00588 SpoU rRNA Methylase family ISU61_19920 PF00132 Bacterial transferase hexapeptide (six repeats) ISU61_19920 PF06426 Serine acetyltransferase, N-terminal ISU61_19925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU61_19925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU61_19930 PF02556 Preprotein translocase subunit SecB ISU61_19935 PF00462 Glutaredoxin ISU61_19940 PF00581 Rhodanese-like domain ISU61_19945 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU61_19945 PF01676 Metalloenzyme superfamily ISU61_19950 PF01551 Peptidase family M23 ISU61_19960 PF00107 Zinc-binding dehydrogenase ISU61_19960 PF08240 Alcohol dehydrogenase GroES-like domain ISU61_19965 PF00155 Aminotransferase class I and II ISU61_19970 PF01370 NAD dependent epimerase/dehydratase family ISU61_19975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU61_19980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU61_19985 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU61_19990 PF00535 Glycosyl transferase family 2 ISU61_19995 PF01467 Cytidylyltransferase-like ISU61_20000 PF06827 Zinc finger found in FPG and IleRS ISU61_20000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU61_20000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU61_20005 PF00471 Ribosomal protein L33 ISU61_20010 PF00830 Ribosomal L28 family ISU61_20015 PF04002 RadC-like JAB domain ISU61_20020 PF04127 DNA / pantothenate metabolism flavoprotein ISU61_20020 PF02441 Flavoprotein ISU61_20025 PF00692 dUTPase ISU61_20030 PF00440 Bacterial regulatory proteins, tetR family ISU61_20035 PF00156 Phosphoribosyl transferase domain ISU61_20040 PF01138 3' exoribonuclease family, domain 1 ISU61_20040 PF03725 3' exoribonuclease family, domain 2 ISU61_20045 PF03755 YicC-like family, N-terminal region ISU61_20045 PF08340 Domain of unknown function (DUF1732) ISU61_20050 PF03458 UPF0126 domain ISU61_20055 PF03120 NAD-dependent DNA ligase OB-fold domain ISU61_20055 PF01653 NAD-dependent DNA ligase adenylation domain ISU61_20060 PF00625 Guanylate kinase ISU61_20065 PF01192 RNA polymerase Rpb6 ISU61_20070 PF13291 ACT domain ISU61_20070 PF04607 Region found in RelA / SpoT proteins ISU61_20070 PF02824 TGS domain ISU61_20075 PF12105 SpoU, rRNA methylase, C-terminal ISU61_20075 PF00588 SpoU rRNA Methylase family ISU61_20080 PF17191 RecG wedge domain ISU61_20080 PF00270 DEAD/DEAH box helicase ISU61_20080 PF00271 Helicase conserved C-terminal domain ISU61_20090 PF03616 Sodium/glutamate symporter ISU61_20095 PF00860 Permease family ISU61_20100 PF05170 AsmA family ISU61_20105 PF00583 Acetyltransferase (GNAT) family ISU61_20105 PF09500 Putative thioesterase (yiiD_Cterm) ISU61_20110 PF00665 Integrase core domain ISU61_20110 PF02796 Helix-turn-helix domain of resolvase ISU61_20115 PF01695 IstB-like ATP binding protein ISU61_20120 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU61_20125 PF03631 Virulence factor BrkB ISU61_20130 PF13419 Haloacid dehalogenase-like hydrolase ISU61_20135 PF00679 Elongation factor G C-terminus ISU61_20135 PF00009 Elongation factor Tu GTP binding domain ISU61_20135 PF03144 Elongation factor Tu domain 2 ISU61_20140 PF00120 Glutamine synthetase, catalytic domain ISU61_20140 PF03951 Glutamine synthetase, beta-Grasp domain ISU61_20145 PF00989 PAS fold ISU61_20145 PF00512 His Kinase A (phospho-acceptor) domain ISU61_20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU61_20150 PF00072 Response regulator receiver domain ISU61_20150 PF00158 Sigma-54 interaction domain ISU61_20150 PF02954 Bacterial regulatory protein, Fis family ISU61_20155 PF06969 HemN C-terminal domain ISU61_20155 PF04055 Radical SAM superfamily ISU61_20160 PF04220 Der GTPase activator (YihI) ISU61_20165 PF01926 50S ribosome-binding GTPase ISU61_20170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU61_20170 PF01612 3'-5' exonuclease ISU61_20170 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU61_20170 PF00476 DNA polymerase family A ISU61_20175 PF01323 DSBA-like thioredoxin domain ISU61_20180 PF01636 Phosphotransferase enzyme family ISU61_20185 PF06288 Protein of unknown function (DUF1040) ISU61_20190 PF12804 MobA-like NTP transferase domain ISU61_20195 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU61_20200 PF00872 Transposase, Mutator family ISU61_20225 PF00392 Bacterial regulatory proteins, gntR family ISU61_20225 PF07729 FCD domain ISU61_20230 PF07690 Major Facilitator Superfamily ISU61_20245 PF00294 pfkB family carbohydrate kinase ISU61_20250 PF05025 RbsD / FucU transport protein family ISU61_20255 PF02705 K+ potassium transporter ISU61_20260 PF17868 AAA lid domain ISU61_20260 PF07728 AAA domain (dynein-related subfamily) ISU61_20260 PF12592 Protein of unknown function (DUF3763) ISU61_20265 PF05762 VWA domain containing CoxE-like protein ISU61_20270 PF03590 Aspartate-ammonia ligase ISU61_20275 PF01037 Lrp/AsnC ligand binding domain ISU61_20280 PF00258 Flavodoxin ISU61_20285 PF13932 GidA associated domain ISU61_20285 PF01134 Glucose inhibited division protein A ISU61_20290 PF02527 rRNA small subunit methyltransferase G ISU61_20295 PF03899 ATP synthase I chain ISU61_20300 PF00119 ATP synthase A chain ISU61_20305 PF00137 ATP synthase subunit C ISU61_20310 PF00430 ATP synthase B/B' CF(0) ISU61_20315 PF00213 ATP synthase delta (OSCP) subunit ISU61_20320 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU61_20320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU61_20320 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU61_20325 PF00231 ATP synthase ISU61_20330 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU61_20330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU61_20335 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU61_20335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU61_20340 PF00132 Bacterial transferase hexapeptide (six repeats) ISU61_20340 PF12804 MobA-like NTP transferase domain ISU61_20345 PF01380 SIS domain ISU61_20350 PF12849 PBP superfamily domain ISU61_20355 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_20360 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_20365 PF00005 ABC transporter ISU61_20370 PF01895 PhoU domain ISU61_20380 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU61_20385 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_20390 PF00528 Binding-protein-dependent transport system inner membrane component ISU61_20395 PF13419 Haloacid dehalogenase-like hydrolase ISU61_20405 PF00860 Permease family ISU61_20425 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU61_20425 PF07055 Enoyl reductase FAD binding domain ISU61_20425 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU61_20430 PF12631 MnmE helical domain ISU61_20430 PF10396 GTP-binding protein TrmE N-terminus ISU61_20430 PF01926 50S ribosome-binding GTPase ISU61_20435 PF14849 YidC periplasmic domain ISU61_20435 PF02096 60Kd inner membrane protein ISU61_20440 PF01809 Putative membrane protein insertion efficiency factor ISU61_20445 PF00825 Ribonuclease P ISU61_20450 PF00468 Ribosomal protein L34