locus-tag class description ISU60_00005 PF11638 DnaA N-terminal domain ISU60_00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU60_00005 PF00308 Bacterial dnaA protein ISU60_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU60_00010 PF02767 DNA polymerase III beta subunit, central domain ISU60_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU60_00020 PF02463 RecF/RecN/SMC N terminal domain ISU60_00025 PF00204 DNA gyrase B ISU60_00025 PF01751 Toprim domain ISU60_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_00025 PF18053 DNA gyrase B subunit insert domain ISU60_00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU60_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU60_00045 PF13291 ACT domain ISU60_00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_00055 PF07119 Protein of unknown function (DUF1375) ISU60_00060 PF00011 Hsp20/alpha crystallin family ISU60_00065 PF00011 Hsp20/alpha crystallin family ISU60_00070 PF06826 Predicted Permease Membrane Region ISU60_00070 PF02080 TrkA-C domain ISU60_00075 PF00155 Aminotransferase class I and II ISU60_00085 PF00128 Alpha amylase, catalytic domain ISU60_00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_00100 PF13488 Glycine zipper ISU60_00100 PF00691 OmpA family ISU60_00110 PF03352 Methyladenine glycosylase ISU60_00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU60_00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU60_00120 PF05746 DALR anticodon binding domain ISU60_00130 PF11254 Protein of unknown function (DUF3053) ISU60_00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_00135 PF02378 Phosphotransferase system, EIIC ISU60_00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_00145 PF05068 Mannitol repressor ISU60_00150 PF10928 Protein of unknown function (DUF2810) ISU60_00165 PF00672 HAMP domain ISU60_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_00165 PF02203 Tar ligand binding domain homologue ISU60_00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU60_00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU60_00175 PF02634 FdhD/NarQ family ISU60_00185 PF09163 Formate dehydrogenase N, transmembrane ISU60_00185 PF13247 4Fe-4S dicluster domain ISU60_00190 PF01292 Prokaryotic cytochrome b561 ISU60_00195 PF04216 Protein involved in formate dehydrogenase formation ISU60_00200 PF03841 L-seryl-tRNA selenium transferase ISU60_00200 PF12390 Selenocysteine synthase N terminal ISU60_00205 PF03144 Elongation factor Tu domain 2 ISU60_00205 PF09107 Elongation factor SelB, winged helix ISU60_00205 PF09106 Elongation factor SelB, winged helix ISU60_00205 PF00009 Elongation factor Tu GTP binding domain ISU60_00235 PF07690 Major Facilitator Superfamily ISU60_00250 PF01757 Acyltransferase family ISU60_00255 PF00419 Fimbrial protein ISU60_00265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_00265 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_00275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_00275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_00285 PF13407 Periplasmic binding protein domain ISU60_00290 PF00005 ABC transporter ISU60_00295 PF02653 Branched-chain amino acid transport system / permease component ISU60_00300 PF12833 Helix-turn-helix domain ISU60_00310 PF14659 Phage integrase, N-terminal SAM-like domain ISU60_00310 PF00589 Phage integrase family ISU60_00310 PF13356 Arm DNA-binding domain ISU60_00320 PF04606 Ogr/Delta-like zinc finger ISU60_00355 PF00005 ABC transporter ISU60_00360 PF01032 FecCD transport family ISU60_00365 PF01032 FecCD transport family ISU60_00370 PF01497 Periplasmic binding protein ISU60_00385 PF00156 Phosphoribosyl transferase domain ISU60_00390 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_00395 PF17392 Urocanase C-terminal domain ISU60_00395 PF01175 Urocanase Rossmann-like domain ISU60_00395 PF17391 Urocanase N-terminal domain ISU60_00400 PF00221 Aromatic amino acid lyase ISU60_00405 PF00324 Amino acid permease ISU60_00410 PF12146 Serine aminopeptidase, S33 ISU60_00415 PF08019 Phosphoethanolamine transferase EptA/EptB ISU60_00415 PF00884 Sulfatase ISU60_00420 PF00196 Bacterial regulatory proteins, luxR family ISU60_00420 PF00072 Response regulator receiver domain ISU60_00430 PF00665 Integrase core domain ISU60_00430 PF02796 Helix-turn-helix domain of resolvase ISU60_00435 PF01695 IstB-like ATP binding protein ISU60_00440 PF07730 Histidine kinase ISU60_00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_00440 PF05231 MASE1 ISU60_00445 PF07690 Major Facilitator Superfamily ISU60_00455 PF05860 haemagglutination activity domain ISU60_00455 PF04829 Pre-toxin domain with VENN motif ISU60_00455 PF05594 Haemagluttinin repeat ISU60_00455 PF13332 Hemagglutinin repeat ISU60_00460 PF08479 POTRA domain, ShlB-type ISU60_00460 PF17287 POTRA domain ISU60_00460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_00465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_00470 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_00475 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_00475 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_00480 PF00005 ABC transporter ISU60_00480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_00485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_00485 PF00005 ABC transporter ISU60_00490 PF01270 Glycosyl hydrolases family 8 ISU60_00495 PF00672 HAMP domain ISU60_00495 PF00990 Diguanylate cyclase, GGDEF domain ISU60_00495 PF17154 Gammaproteobacterial periplasmic sensor domain ISU60_00495 PF00563 EAL domain ISU60_00500 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU60_00505 PF06917 Periplasmic pectate lyase ISU60_00515 PF00375 Sodium:dicarboxylate symporter family ISU60_00520 PF00675 Insulinase (Peptidase family M16) ISU60_00520 PF05193 Peptidase M16 inactive domain ISU60_00525 PF00294 pfkB family carbohydrate kinase ISU60_00530 PF01361 Tautomerase enzyme ISU60_00535 PF00563 EAL domain ISU60_00540 PF05170 AsmA family ISU60_00545 PF02611 CDP-diacylglycerol pyrophosphatase ISU60_00550 PF03631 Virulence factor BrkB ISU60_00575 PF02595 Glycerate kinase family ISU60_00580 PF02447 GntP family permease ISU60_00590 PF05651 Putative sugar diacid recognition ISU60_00590 PF17853 GGDEF-like domain ISU60_00590 PF13556 PucR C-terminal helix-turn-helix domain ISU60_00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_00595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_00600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU60_00605 PF01432 Peptidase family M3 ISU60_00610 PF04445 Putative SAM-dependent methyltransferase ISU60_00615 PF08548 Peptidase M10 serralysin C terminal ISU60_00615 PF00413 Matrixin ISU60_00615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU60_00620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU60_00620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU60_00625 PF00582 Universal stress protein family ISU60_00630 PF10625 Universal stress protein B (UspB) ISU60_00640 PF01384 Phosphate transporter family ISU60_00650 PF00072 Response regulator receiver domain ISU60_00650 PF00512 His Kinase A (phospho-acceptor) domain ISU60_00650 PF08448 PAS fold ISU60_00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_00650 PF13188 PAS domain ISU60_00655 PF00005 ABC transporter ISU60_00660 PF02653 Branched-chain amino acid transport system / permease component ISU60_00665 PF13407 Periplasmic binding protein domain ISU60_00675 PF01116 Fructose-bisphosphate aldolase class-II ISU60_00685 PF00072 Response regulator receiver domain ISU60_00685 PF00486 Transcriptional regulatory protein, C terminal ISU60_00695 PF02678 Pirin ISU60_00695 PF17954 Quercetinase C-terminal cupin domain ISU60_00700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_00700 PF00356 Bacterial regulatory proteins, lacI family ISU60_00705 PF02447 GntP family permease ISU60_00710 PF01202 Shikimate kinase ISU60_00725 PF01914 MarC family integral membrane protein ISU60_00730 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU60_00730 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU60_00760 PF02369 Bacterial Ig-like domain (group 1) ISU60_00760 PF11924 Inverse autotransporter, beta-domain ISU60_00760 PF09134 Invasin, domain 3 ISU60_00760 PF07979 Intimin C-type lectin domain ISU60_00765 PF07694 5TMR of 5TMR-LYT ISU60_00765 PF06580 Histidine kinase ISU60_00770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU60_00770 PF02806 Alpha amylase, C-terminal all-beta domain ISU60_00770 PF00128 Alpha amylase, catalytic domain ISU60_00775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU60_00775 PF18390 Glycogen debranching enzyme C-terminal domain ISU60_00775 PF00128 Alpha amylase, catalytic domain ISU60_00785 PF08323 Starch synthase catalytic domain ISU60_00785 PF00534 Glycosyl transferases group 1 ISU60_00790 PF00343 Carbohydrate phosphorylase ISU60_00795 PF01266 FAD dependent oxidoreductase ISU60_00795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU60_00820 PF08220 DeoR-like helix-turn-helix domain ISU60_00820 PF00455 DeoR C terminal sensor domain ISU60_00825 PF01694 Rhomboid family ISU60_00825 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU60_00830 PF00581 Rhodanese-like domain ISU60_00835 PF00196 Bacterial regulatory proteins, luxR family ISU60_00835 PF17874 MalT-like TPR region ISU60_00840 PF00343 Carbohydrate phosphorylase ISU60_00845 PF00343 Carbohydrate phosphorylase ISU60_00850 PF02446 4-alpha-glucanotransferase ISU60_00855 PF01521 Iron-sulphur cluster biosynthesis ISU60_00855 PF01106 NifU-like domain ISU60_00860 PF00156 Phosphoribosyl transferase domain ISU60_00865 PF00561 alpha/beta hydrolase fold ISU60_00870 PF07338 Protein of unknown function (DUF1471) ISU60_00875 PF09012 FeoC like transcriptional regulator ISU60_00880 PF17910 FeoB cytosolic helical domain ISU60_00880 PF07670 Nucleoside recognition ISU60_00880 PF07664 Ferrous iron transport protein B C terminus ISU60_00880 PF02421 Ferrous iron transport protein B ISU60_00885 PF04023 FeoA domain ISU60_00890 PF09371 Tex-like protein N-terminal domain ISU60_00890 PF00575 S1 RNA binding domain ISU60_00890 PF17674 HHH domain ISU60_00890 PF16921 Tex protein YqgF-like domain ISU60_00895 PF03449 Transcription elongation factor, N-terminal ISU60_00895 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU60_00900 PF00486 Transcriptional regulatory protein, C terminal ISU60_00900 PF00072 Response regulator receiver domain ISU60_00905 PF00672 HAMP domain ISU60_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_00905 PF00512 His Kinase A (phospho-acceptor) domain ISU60_00910 PF01293 Phosphoenolpyruvate carboxykinase ISU60_00915 PF01430 Hsp33 protein ISU60_00920 PF01479 S4 domain ISU60_00925 PF13419 Haloacid dehalogenase-like hydrolase ISU60_00930 PF07095 Intracellular growth attenuator protein IgaA ISU60_00935 PF00293 NUDIX domain ISU60_00940 PF17092 Penicillin-binding protein OB-like domain ISU60_00940 PF00912 Transglycosylase ISU60_00940 PF00905 Penicillin binding protein transpeptidase domain ISU60_00965 PF03958 Bacterial type II/III secretion system short domain ISU60_00965 PF00263 Bacterial type II and III secretion system protein ISU60_00970 PF01202 Shikimate kinase ISU60_00975 PF01761 3-dehydroquinate synthase ISU60_00980 PF05036 Sporulation related domain ISU60_00985 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU60_00990 PF00834 Ribulose-phosphate 3 epimerase family ISU60_00995 PF13419 Haloacid dehalogenase-like hydrolase ISU60_01000 PF00579 tRNA synthetases class I (W and Y) ISU60_01005 PF10414 Sirohaem synthase dimerisation region ISU60_01005 PF14824 Sirohaem biosynthesis protein central ISU60_01005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU60_01010 PF01226 Formate/nitrite transporter ISU60_01015 PF13806 Rieske-like [2Fe-2S] domain ISU60_01020 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU60_01020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_01020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU60_01020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU60_01020 PF04324 BFD-like [2Fe-2S] binding domain ISU60_01025 PF07969 Amidohydrolase family ISU60_01030 PF07690 Major Facilitator Superfamily ISU60_01040 PF00356 Bacterial regulatory proteins, lacI family ISU60_01045 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU60_01045 PF02056 Family 4 glycosyl hydrolase ISU60_01050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU60_01055 PF05872 Bacterial protein of unknown function (DUF853) ISU60_01060 PF00117 Glutamine amidotransferase class-I ISU60_01065 PF00202 Aminotransferase class-III ISU60_01070 PF12805 FUSC-like inner membrane protein yccS ISU60_01075 PF13545 Crp-like helix-turn-helix domain ISU60_01075 PF00027 Cyclic nucleotide-binding domain ISU60_01080 PF02566 OsmC-like protein ISU60_01090 PF00485 Phosphoribulokinase / Uridine kinase family ISU60_01095 PF06794 Uncharacterised protein family (UPF0270) ISU60_01100 PF00561 alpha/beta hydrolase fold ISU60_01105 PF01810 LysE type translocator ISU60_01110 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU60_01115 PF00005 ABC transporter ISU60_01120 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_01125 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU60_01135 PF00535 Glycosyl transferase family 2 ISU60_01145 PF02525 Flavodoxin-like fold ISU60_01150 PF02254 TrkA-N domain ISU60_01150 PF00999 Sodium/hydrogen exchanger family ISU60_01155 PF09526 Probable metal-binding protein (DUF2387) ISU60_01160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_01165 PF04102 SlyX ISU60_01170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU60_01170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_01175 PF13309 HTH domain ISU60_01175 PF08348 YheO-like PAS domain ISU60_01180 PF02635 DsrE/DsrF-like family ISU60_01185 PF02635 DsrE/DsrF-like family ISU60_01190 PF04077 DsrH like protein ISU60_01195 PF00164 Ribosomal protein S12/S23 ISU60_01200 PF00177 Ribosomal protein S7p/S5e ISU60_01205 PF00679 Elongation factor G C-terminus ISU60_01205 PF00009 Elongation factor Tu GTP binding domain ISU60_01205 PF03764 Elongation factor G, domain IV ISU60_01205 PF14492 Elongation Factor G, domain II ISU60_01205 PF03144 Elongation factor Tu domain 2 ISU60_01210 PF03144 Elongation factor Tu domain 2 ISU60_01210 PF03143 Elongation factor Tu C-terminal domain ISU60_01210 PF00009 Elongation factor Tu GTP binding domain ISU60_01215 PF01797 Transposase IS200 like ISU60_01220 PF02796 Helix-turn-helix domain of resolvase ISU60_01220 PF00665 Integrase core domain ISU60_01225 PF01695 IstB-like ATP binding protein ISU60_01230 PF04324 BFD-like [2Fe-2S] binding domain ISU60_01235 PF00210 Ferritin-like domain ISU60_01240 PF00338 Ribosomal protein S10p/S20e ISU60_01245 PF00297 Ribosomal protein L3 ISU60_01250 PF00573 Ribosomal protein L4/L1 family ISU60_01255 PF00276 Ribosomal protein L23 ISU60_01260 PF00181 Ribosomal Proteins L2, RNA binding domain ISU60_01260 PF03947 Ribosomal Proteins L2, C-terminal domain ISU60_01265 PF00203 Ribosomal protein S19 ISU60_01270 PF00237 Ribosomal protein L22p/L17e ISU60_01275 PF07650 KH domain ISU60_01275 PF00189 Ribosomal protein S3, C-terminal domain ISU60_01280 PF00252 Ribosomal protein L16p/L10e ISU60_01285 PF00831 Ribosomal L29 protein ISU60_01290 PF00366 Ribosomal protein S17 ISU60_01295 PF00238 Ribosomal protein L14p/L23e ISU60_01300 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU60_01300 PF00467 KOW motif ISU60_01305 PF00673 ribosomal L5P family C-terminus ISU60_01305 PF00281 Ribosomal protein L5 ISU60_01310 PF00253 Ribosomal protein S14p/S29e ISU60_01315 PF00410 Ribosomal protein S8 ISU60_01320 PF00347 Ribosomal protein L6 ISU60_01325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU60_01330 PF03719 Ribosomal protein S5, C-terminal domain ISU60_01330 PF00333 Ribosomal protein S5, N-terminal domain ISU60_01335 PF00327 Ribosomal protein L30p/L7e ISU60_01340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU60_01345 PF00344 SecY translocase ISU60_01350 PF00444 Ribosomal protein L36 ISU60_01355 PF00416 Ribosomal protein S13/S18 ISU60_01360 PF00411 Ribosomal protein S11 ISU60_01365 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU60_01365 PF01479 S4 domain ISU60_01370 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU60_01370 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU60_01370 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU60_01375 PF01196 Ribosomal protein L17 ISU60_01380 PF13411 MerR HTH family regulatory protein ISU60_01385 PF03889 Alternative ribosome-rescue factor A ISU60_01390 PF01741 Large-conductance mechanosensitive channel, MscL ISU60_01395 PF02080 TrkA-C domain ISU60_01395 PF02254 TrkA-N domain ISU60_01400 PF01029 NusB family ISU60_01400 PF01189 16S rRNA methyltransferase RsmB/F ISU60_01405 PF00551 Formyl transferase ISU60_01405 PF02911 Formyl transferase, C-terminal domain ISU60_01410 PF01327 Polypeptide deformylase ISU60_01415 PF17782 DprA winged helix domain ISU60_01415 PF02481 DNA recombination-mediator protein A ISU60_01420 PF04361 Protein of unknown function (DUF494) ISU60_01425 PF01396 Topoisomerase DNA binding C4 zinc finger ISU60_01430 PF01300 Telomere recombination ISU60_01435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU60_01435 PF01488 Shikimate / quinate 5-dehydrogenase ISU60_01435 PF08501 Shikimate dehydrogenase substrate binding domain ISU60_01440 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_01445 PF01695 IstB-like ATP binding protein ISU60_01450 PF02796 Helix-turn-helix domain of resolvase ISU60_01450 PF00665 Integrase core domain ISU60_01485 PF04204 Homoserine O-succinyltransferase ISU60_01490 PF01274 Malate synthase ISU60_01495 PF00463 Isocitrate lyase family ISU60_01500 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU60_01515 PF05860 haemagglutination activity domain ISU60_01515 PF13332 Hemagglutinin repeat ISU60_01525 PF00696 Amino acid kinase family ISU60_01525 PF01842 ACT domain ISU60_01530 PF00342 Phosphoglucose isomerase ISU60_01535 PF06146 Phosphate-starvation-inducible E ISU60_01540 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_01545 PF14785 Maltose transport system permease protein MalF P2 domain ISU60_01545 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_01550 PF01547 Bacterial extracellular solute-binding protein ISU60_01560 PF00005 ABC transporter ISU60_01560 PF17912 MalK OB fold domain ISU60_01565 PF02264 LamB porin ISU60_01570 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU60_01580 PF05638 Type VI secretion system effector, Hcp ISU60_01590 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_01600 PF05947 Type VI secretion system, TssF ISU60_01630 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU60_01640 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_01640 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_01640 PF07724 AAA domain (Cdc48 subfamily) ISU60_01640 PF17871 AAA lid domain ISU60_01675 PF04717 Type VI secretion system, phage-baseplate injector ISU60_01690 PF05593 RHS Repeat ISU60_01690 PF03527 RHS protein ISU60_01720 PF04717 Type VI secretion system, phage-baseplate injector ISU60_01730 PF03527 RHS protein ISU60_01730 PF05593 RHS Repeat ISU60_01750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_01750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_01755 PF12833 Helix-turn-helix domain ISU60_01755 PF02311 AraC-like ligand binding domain ISU60_01760 PF05025 RbsD / FucU transport protein family ISU60_01765 PF00294 pfkB family carbohydrate kinase ISU60_01770 PF01791 DeoC/LacD family aldolase ISU60_01775 PF03358 NADPH-dependent FMN reductase ISU60_01780 PF09084 NMT1/THI5 like ISU60_01785 PF00296 Luciferase-like monooxygenase ISU60_01790 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_01795 PF00005 ABC transporter ISU60_01805 PF04221 RelB antitoxin ISU60_01810 PF00860 Permease family ISU60_01815 PF00999 Sodium/hydrogen exchanger family ISU60_01825 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU60_01835 PF00005 ABC transporter ISU60_01840 PF02653 Branched-chain amino acid transport system / permease component ISU60_01850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_01850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_01855 PF00571 CBS domain ISU60_01855 PF01380 SIS domain ISU60_01860 PF02798 Glutathione S-transferase, N-terminal domain ISU60_01880 PF00313 'Cold-shock' DNA-binding domain ISU60_01885 PF00313 'Cold-shock' DNA-binding domain ISU60_01890 PF05433 Glycine zipper 2TM domain ISU60_01895 PF00753 Metallo-beta-lactamase superfamily ISU60_01900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU60_01900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU60_01905 PF02627 Carboxymuconolactone decarboxylase family ISU60_01910 PF07690 Major Facilitator Superfamily ISU60_01935 PF02954 Bacterial regulatory protein, Fis family ISU60_01940 PF01207 Dihydrouridine synthase (Dus) ISU60_01950 PF00474 Sodium:solute symporter family ISU60_01955 PF06196 Protein of unknown function (DUF997) ISU60_01965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU60_01965 PF00289 Biotin carboxylase, N-terminal domain ISU60_01965 PF02785 Biotin carboxylase C-terminal domain ISU60_01970 PF00364 Biotin-requiring enzyme ISU60_01975 PF01220 Dehydroquinase class II ISU60_01980 PF01794 Ferric reductase like transmembrane component ISU60_01985 PF00174 Oxidoreductase molybdopterin binding domain ISU60_01990 PF00107 Zinc-binding dehydrogenase ISU60_01990 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_01995 PF00990 Diguanylate cyclase, GGDEF domain ISU60_01995 PF17157 Gammaproteobacterial periplasmic sensor domain ISU60_01995 PF00563 EAL domain ISU60_02005 PF04085 rod shape-determining protein MreC ISU60_02010 PF04093 rod shape-determining protein MreD ISU60_02015 PF02545 Maf-like protein ISU60_02020 PF00575 S1 RNA binding domain ISU60_02020 PF10150 Ribonuclease E/G family ISU60_02025 PF13502 AsmA-like C-terminal region ISU60_02025 PF13116 Protein of unknown function ISU60_02030 PF00795 Carbon-nitrogen hydrolase ISU60_02035 PF01523 Putative modulator of DNA gyrase ISU60_02040 PF18807 Tripartite Tc toxins repeat ISU60_02040 PF14431 YwqJ-like deaminase ISU60_02045 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU60_02045 PF18807 Tripartite Tc toxins repeat ISU60_02065 PF03534 Salmonella virulence plasmid 65kDa B protein ISU60_02065 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU60_02065 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU60_02070 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU60_02070 PF18413 Neuraminidase-like domain ISU60_02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_02080 PF03466 LysR substrate binding domain ISU60_02085 PF03466 LysR substrate binding domain ISU60_02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_02090 PF07869 Protein of unknown function (DUF1656) ISU60_02095 PF13533 Biotin-lipoyl like ISU60_02100 PF04632 Fusaric acid resistance protein family ISU60_02115 PF01337 Barstar (barnase inhibitor) ISU60_02120 PF04751 Protein of unknown function (DUF615) ISU60_02125 PF01523 Putative modulator of DNA gyrase ISU60_02135 PF07361 Cytochrome b562 ISU60_02140 PF14760 Rnk N-terminus ISU60_02140 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU60_02145 PF00128 Alpha amylase, catalytic domain ISU60_02145 PF11941 Domain of unknown function (DUF3459) ISU60_02150 PF02378 Phosphotransferase system, EIIC ISU60_02150 PF00367 phosphotransferase system, EIIB ISU60_02155 PF00356 Bacterial regulatory proteins, lacI family ISU60_02165 PF01042 Endoribonuclease L-PSP ISU60_02170 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU60_02170 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU60_02175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU60_02175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU60_02180 PF00381 PTS HPr component phosphorylation site ISU60_02185 PF03668 P-loop ATPase protein family ISU60_02190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_02200 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU60_02200 PF04552 Sigma-54, DNA binding domain ISU60_02200 PF04963 Sigma-54 factor, core binding domain ISU60_02205 PF00005 ABC transporter ISU60_02205 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU60_02210 PF03968 OstA-like protein ISU60_02215 PF06835 Lipopolysaccharide-assembly, LptC-related ISU60_02225 PF01380 SIS domain ISU60_02225 PF00571 CBS domain ISU60_02230 PF01699 Sodium/calcium exchanger protein ISU60_02235 PF00005 ABC transporter ISU60_02240 PF02405 Permease MlaE ISU60_02245 PF02470 MlaD protein ISU60_02250 PF05494 MlaC protein ISU60_02255 PF13466 STAS domain ISU60_02260 PF01722 BolA-like protein ISU60_02265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU60_02270 PF13180 PDZ domain ISU60_02275 PF01797 Transposase IS200 like ISU60_02280 PF00595 PDZ domain ISU60_02280 PF13180 PDZ domain ISU60_02285 PF06295 Protein of unknown function (DUF1043) ISU60_02290 PF03969 AFG1-like ATPase ISU60_02295 PF00572 Ribosomal protein L13 ISU60_02300 PF00380 Ribosomal protein S9/S16 ISU60_02310 PF00043 Glutathione S-transferase, C-terminal domain ISU60_02310 PF02798 Glutathione S-transferase, N-terminal domain ISU60_02315 PF04386 Stringent starvation protein B ISU60_02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_02325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU60_02330 PF01493 GXGXG motif ISU60_02330 PF00310 Glutamine amidotransferases class-II ISU60_02330 PF04898 Glutamate synthase central domain ISU60_02330 PF01645 Conserved region in glutamate synthase ISU60_02335 PF04055 Radical SAM superfamily ISU60_02335 PF16199 Radical_SAM C-terminal domain ISU60_02340 PF00072 Response regulator receiver domain ISU60_02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_02340 PF00512 His Kinase A (phospho-acceptor) domain ISU60_02340 PF01627 Hpt domain ISU60_02340 PF00989 PAS fold ISU60_02340 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU60_02350 PF00912 Transglycosylase ISU60_02355 PF04972 BON domain ISU60_02360 PF13580 SIS domain ISU60_02365 PF02021 Uncharacterised protein family UPF0102 ISU60_02370 PF04348 LppC putative lipoprotein ISU60_02375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU60_02385 PF17954 Quercetinase C-terminal cupin domain ISU60_02385 PF02678 Pirin ISU60_02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_02390 PF03466 LysR substrate binding domain ISU60_02400 PF01695 IstB-like ATP binding protein ISU60_02405 PF02796 Helix-turn-helix domain of resolvase ISU60_02405 PF00665 Integrase core domain ISU60_02415 PF03884 DNA gyrase inhibitor YacG ISU60_02420 PF07072 Cell division protein ISU60_02425 PF01121 Dephospho-CoA kinase ISU60_02430 PF00478 IMP dehydrogenase / GMP reductase domain ISU60_02435 PF00482 Type II secretion system (T2SS), protein F ISU60_02440 PF00437 Type II/IV secretion system protein ISU60_02440 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU60_02445 PF07963 Prokaryotic N-terminal methylation motif ISU60_02450 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU60_02450 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU60_02455 PF01510 N-acetylmuramoyl-L-alanine amidase ISU60_02460 PF17113 Regulatory signalling modulator protein AmpE ISU60_02465 PF00324 Amino acid permease ISU60_02470 PF07729 FCD domain ISU60_02470 PF00392 Bacterial regulatory proteins, gntR family ISU60_02475 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU60_02475 PF00456 Transketolase, thiamine diphosphate binding domain ISU60_02480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU60_02480 PF00364 Biotin-requiring enzyme ISU60_02480 PF02817 e3 binding domain ISU60_02485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_02485 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_02490 PF01797 Transposase IS200 like ISU60_02495 PF06434 Aconitate hydratase 2 N-terminus ISU60_02495 PF11791 Aconitate B N-terminal domain ISU60_02495 PF00330 Aconitase family (aconitate hydratase) ISU60_02500 PF06062 Uncharacterised protein family (UPF0231) ISU60_02505 PF00892 EamA-like transporter family ISU60_02510 PF02675 S-adenosylmethionine decarboxylase ISU60_02515 PF17284 Spermidine synthase tetramerisation domain ISU60_02520 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU60_02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU60_02525 PF07732 Multicopper oxidase ISU60_02525 PF00394 Multicopper oxidase ISU60_02525 PF07731 Multicopper oxidase ISU60_02530 PF00156 Phosphoribosyl transferase domain ISU60_02535 PF00484 Carbonic anhydrase ISU60_02540 PF00005 ABC transporter ISU60_02545 PF01061 ABC-2 type transporter ISU60_02555 PF02261 Aspartate decarboxylase ISU60_02560 PF02569 Pantoate-beta-alanine ligase ISU60_02565 PF02548 Ketopantoate hydroxymethyltransferase ISU60_02570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU60_02575 PF12626 Polymerase A arginine-rich C-terminus ISU60_02575 PF01743 Poly A polymerase head domain ISU60_02575 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU60_02580 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU60_02585 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU60_02590 PF17746 SfsA N-terminal OB domain ISU60_02590 PF03749 Sugar fermentation stimulation protein RE domain ISU60_02595 PF02834 LigT like Phosphoesterase ISU60_02600 PF00271 Helicase conserved C-terminal domain ISU60_02600 PF04408 Helicase associated domain (HA2) ISU60_02600 PF00270 DEAD/DEAH box helicase ISU60_02600 PF08482 ATP-dependent helicase C-terminal ISU60_02605 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU60_02605 PF00912 Transglycosylase ISU60_02605 PF00905 Penicillin binding protein transpeptidase domain ISU60_02605 PF14814 Bifunctional transglycosylase second domain ISU60_02610 PF00005 ABC transporter ISU60_02615 PF01497 Periplasmic binding protein ISU60_02620 PF01032 FecCD transport family ISU60_02625 PF00202 Aminotransferase class-III ISU60_02630 PF00654 Voltage gated chloride channel ISU60_02635 PF01521 Iron-sulphur cluster biosynthesis ISU60_02640 PF03458 UPF0126 domain ISU60_02645 PF01497 Periplasmic binding protein ISU60_02650 PF01048 Phosphorylase superfamily ISU60_02655 PF01966 HD domain ISU60_02655 PF13286 Phosphohydrolase-associated domain ISU60_02660 PF00595 PDZ domain ISU60_02665 PF00672 HAMP domain ISU60_02665 PF00512 His Kinase A (phospho-acceptor) domain ISU60_02665 PF01627 Hpt domain ISU60_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_02665 PF00072 Response regulator receiver domain ISU60_02665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU60_02675 PF05958 tRNA (Uracil-5-)-methyltransferase ISU60_02675 PF01938 TRAM domain ISU60_02680 PF04607 Region found in RelA / SpoT proteins ISU60_02680 PF02824 TGS domain ISU60_02680 PF13291 ACT domain ISU60_02685 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU60_02690 PF06418 CTP synthase N-terminus ISU60_02690 PF00117 Glutamine amidotransferase class-I ISU60_02695 PF03952 Enolase, N-terminal domain ISU60_02695 PF00113 Enolase, C-terminal TIM barrel domain ISU60_02700 PF00080 Copper/zinc superoxide dismutase (SODC) ISU60_02705 PF04055 Radical SAM superfamily ISU60_02710 PF01242 6-pyruvoyl tetrahydropterin synthase ISU60_02715 PF00667 FAD binding domain ISU60_02715 PF00175 Oxidoreductase NAD-binding domain ISU60_02715 PF00258 Flavodoxin ISU60_02750 PF10414 Sirohaem synthase dimerisation region ISU60_02750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU60_02750 PF14824 Sirohaem biosynthesis protein central ISU60_02755 PF01507 Phosphoadenosine phosphosulfate reductase family ISU60_02760 PF00009 Elongation factor Tu GTP binding domain ISU60_02770 PF12084 Protein of unknown function (DUF3561) ISU60_02775 PF04977 Septum formation initiator ISU60_02780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU60_02785 PF02542 YgbB family ISU60_02790 PF01142 tRNA pseudouridine synthase D (TruD) ISU60_02795 PF01975 Survival protein SurE ISU60_02805 PF01476 LysM domain ISU60_02805 PF01551 Peptidase family M23 ISU60_02810 PF00140 Sigma-70 factor, region 1.2 ISU60_02810 PF04542 Sigma-70 region 2 ISU60_02810 PF04539 Sigma-70 region 3 ISU60_02810 PF04545 Sigma-70, region 4 ISU60_02815 PF05190 MutS family domain IV ISU60_02815 PF05192 MutS domain III ISU60_02815 PF05188 MutS domain II ISU60_02815 PF00488 MutS domain V ISU60_02815 PF01624 MutS domain I ISU60_02820 PF02502 Ribose/Galactose Isomerase ISU60_02825 PF00107 Zinc-binding dehydrogenase ISU60_02825 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_02835 PF02733 Dak1 domain ISU60_02840 PF02734 DAK2 domain ISU60_02845 PF04198 Putative sugar-binding domain ISU60_02845 PF13936 Helix-turn-helix domain ISU60_02850 PF02040 Arsenical pump membrane protein ISU60_02855 PF01022 Bacterial regulatory protein, arsR family ISU60_02870 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_02875 PF14376 Haem-binding domain ISU60_02875 PF00034 Cytochrome c ISU60_02875 PF03150 Di-haem cytochrome c peroxidase ISU60_02885 PF07715 TonB-dependent Receptor Plug Domain ISU60_02885 PF00593 TonB dependent receptor ISU60_02895 PF00557 Metallopeptidase family M24 ISU60_02905 PF05683 Fumarase C-terminus ISU60_02905 PF05681 Fumarate hydratase (Fumerase) ISU60_02910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_02910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_02915 PF01261 Xylose isomerase-like TIM barrel ISU60_02920 PF02653 Branched-chain amino acid transport system / permease component ISU60_02925 PF02653 Branched-chain amino acid transport system / permease component ISU60_02930 PF00005 ABC transporter ISU60_02935 PF01797 Transposase IS200 like ISU60_02945 PF00455 DeoR C terminal sensor domain ISU60_02945 PF08220 DeoR-like helix-turn-helix domain ISU60_02950 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_02955 PF00384 Molybdopterin oxidoreductase ISU60_02955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_02955 PF01568 Molydopterin dinucleotide binding domain ISU60_02960 PF12800 4Fe-4S binding domain ISU60_02960 PF13247 4Fe-4S dicluster domain ISU60_02965 PF04976 DMSO reductase anchor subunit (DmsC) ISU60_02970 PF02613 Nitrate reductase delta subunit ISU60_02975 PF01292 Prokaryotic cytochrome b561 ISU60_02980 PF07361 Cytochrome b562 ISU60_02985 PF00141 Peroxidase ISU60_02990 PF13407 Periplasmic binding protein domain ISU60_03000 PF00005 ABC transporter ISU60_03005 PF02653 Branched-chain amino acid transport system / permease component ISU60_03010 PF00456 Transketolase, thiamine diphosphate binding domain ISU60_03015 PF02779 Transketolase, pyrimidine binding domain ISU60_03015 PF02780 Transketolase, C-terminal domain ISU60_03020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_03020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_03035 PF07690 Major Facilitator Superfamily ISU60_03040 PF02464 Competence-damaged protein ISU60_03045 PF00154 recA bacterial DNA recombination protein ISU60_03050 PF02631 RecX family ISU60_03055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU60_03055 PF02272 DHHA1 domain ISU60_03055 PF01411 tRNA synthetases class II (A) ISU60_03060 PF02599 Global regulator protein family ISU60_03090 PF13419 Haloacid dehalogenase-like hydrolase ISU60_03095 PF09335 SNARE associated Golgi protein ISU60_03100 PF04262 Glutamate-cysteine ligase ISU60_03105 PF02664 S-Ribosylhomocysteinase (LuxS) ISU60_03115 PF03471 Transporter associated domain ISU60_03115 PF01595 Cyclin M transmembrane N-terminal domain ISU60_03115 PF00571 CBS domain ISU60_03120 PF01578 Cytochrome C assembly protein ISU60_03125 PF02978 Signal peptide binding domain ISU60_03125 PF02881 SRP54-type protein, helical bundle domain ISU60_03125 PF00448 SRP54-type protein, GTPase domain ISU60_03130 PF00886 Ribosomal protein S16 ISU60_03135 PF05239 PRC-barrel domain ISU60_03135 PF01782 RimM N-terminal domain ISU60_03140 PF01746 tRNA (Guanine-1)-methyltransferase ISU60_03145 PF01245 Ribosomal protein L19 ISU60_03155 PF04338 Protein of unknown function, DUF481 ISU60_03165 PF04397 LytTr DNA-binding domain ISU60_03165 PF00072 Response regulator receiver domain ISU60_03170 PF00793 DAHP synthetase I family ISU60_03175 PF02153 Prephenate dehydrogenase ISU60_03175 PF01817 Chorismate mutase type II ISU60_03185 PF01695 IstB-like ATP binding protein ISU60_03190 PF02796 Helix-turn-helix domain of resolvase ISU60_03190 PF00665 Integrase core domain ISU60_03200 PF01797 Transposase IS200 like ISU60_03205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU60_03210 PF13525 Outer membrane lipoprotein ISU60_03215 PF00849 RNA pseudouridylate synthase ISU60_03215 PF01479 S4 domain ISU60_03225 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_03225 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_03225 PF07724 AAA domain (Cdc48 subfamily) ISU60_03225 PF02861 Clp amino terminal domain, pathogenicity island component ISU60_03225 PF17871 AAA lid domain ISU60_03255 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU60_03260 PF13091 PLD-like domain ISU60_03265 PF13380 CoA binding domain ISU60_03265 PF00583 Acetyltransferase (GNAT) family ISU60_03265 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU60_03270 PF03942 DTW domain ISU60_03275 PF00085 Thioredoxin ISU60_03280 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU60_03280 PF00588 SpoU rRNA Methylase family ISU60_03285 PF07690 Major Facilitator Superfamily ISU60_03290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_03290 PF00529 HlyD membrane-fusion protein of T1SS ISU60_03295 PF01047 MarR family ISU60_03300 PF05437 Branched-chain amino acid transport protein (AzlD) ISU60_03305 PF03591 AzlC protein ISU60_03310 PF07690 Major Facilitator Superfamily ISU60_03320 PF01425 Amidase ISU60_03335 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_03340 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_03345 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_03350 PF00005 ABC transporter ISU60_03355 PF00266 Aminotransferase class-V ISU60_03360 PF01695 IstB-like ATP binding protein ISU60_03365 PF02796 Helix-turn-helix domain of resolvase ISU60_03365 PF00665 Integrase core domain ISU60_03370 PF00266 Aminotransferase class-V ISU60_03385 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_03385 PF08479 POTRA domain, ShlB-type ISU60_03390 PF05860 haemagglutination activity domain ISU60_03395 PF18071 HMW1C N-terminal ISU60_03395 PF18254 HMW1 domain 2 ISU60_03405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU60_03405 PF09317 Domain of unknown function (DUF1974) ISU60_03405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU60_03410 PF13580 SIS domain ISU60_03415 PF13230 Glutamine amidotransferases class-II ISU60_03420 PF03734 L,D-transpeptidase catalytic domain ISU60_03425 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU60_03425 PF11973 NQRA C-terminal domain ISU60_03430 PF03116 NQR2, RnfD, RnfE family ISU60_03435 PF04205 FMN-binding domain ISU60_03440 PF02508 Rnf-Nqr subunit, membrane protein ISU60_03445 PF02508 Rnf-Nqr subunit, membrane protein ISU60_03450 PF00970 Oxidoreductase FAD-binding domain ISU60_03450 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_03450 PF00175 Oxidoreductase NAD-binding domain ISU60_03455 PF02424 ApbE family ISU60_03465 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_03470 PF00817 impB/mucB/samB family ISU60_03470 PF11798 IMS family HHH motif ISU60_03470 PF11799 impB/mucB/samB family C-terminal domain ISU60_03475 PF01546 Peptidase family M20/M25/M40 ISU60_03475 PF07687 Peptidase dimerisation domain ISU60_03480 PF03466 LysR substrate binding domain ISU60_03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_03495 PF00156 Phosphoribosyl transferase domain ISU60_03500 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU60_03505 PF07417 Sigma factor-binding transcriptional regulator Crl ISU60_03510 PF00696 Amino acid kinase family ISU60_03510 PF01472 PUA domain ISU60_03515 PF00171 Aldehyde dehydrogenase family ISU60_03520 PF07317 Flagellar regulator YcgR ISU60_03520 PF07238 PilZ domain ISU60_03530 PF08241 Methyltransferase domain ISU60_03540 PF01202 Shikimate kinase ISU60_03545 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU60_03550 PF04381 Putative exonuclease, RdgC ISU60_03555 PF00480 ROK family ISU60_03560 PF13476 AAA domain ISU60_03565 PF00149 Calcineurin-like phosphoesterase ISU60_03565 PF12320 Type 5 capsule protein repressor C-terminal domain ISU60_03570 PF00072 Response regulator receiver domain ISU60_03570 PF00486 Transcriptional regulatory protein, C terminal ISU60_03575 PF00512 His Kinase A (phospho-acceptor) domain ISU60_03575 PF11808 Phosphate regulon sensor protein PhoR ISU60_03575 PF00989 PAS fold ISU60_03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_03580 PF12849 PBP superfamily domain ISU60_03585 PF05525 Branched-chain amino acid transport protein ISU60_03590 PF00324 Amino acid permease ISU60_03595 PF00128 Alpha amylase, catalytic domain ISU60_03595 PF02903 Alpha amylase, N-terminal ig-like domain ISU60_03620 PF00578 AhpC/TSA family ISU60_03620 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU60_03625 PF04336 Acyl carrier protein phosphodiesterase ISU60_03630 PF02547 Queuosine biosynthesis protein ISU60_03635 PF01702 Queuine tRNA-ribosyltransferase ISU60_03640 PF02699 Preprotein translocase subunit ISU60_03645 PF07549 SecD/SecF GG Motif ISU60_03645 PF13721 SecD export protein N-terminal TM region ISU60_03645 PF02355 Protein export membrane protein ISU60_03650 PF02355 Protein export membrane protein ISU60_03650 PF07549 SecD/SecF GG Motif ISU60_03660 PF01797 Transposase IS200 like ISU60_03675 PF03477 ATP cone domain ISU60_03680 PF01872 RibD C-terminal domain ISU60_03680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU60_03685 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU60_03690 PF01029 NusB family ISU60_03695 PF00586 AIR synthase related protein, N-terminal domain ISU60_03695 PF02769 AIR synthase related protein, C-terminal domain ISU60_03700 PF04608 Phosphatidylglycerophosphatase A ISU60_03710 PF02779 Transketolase, pyrimidine binding domain ISU60_03710 PF02780 Transketolase, C-terminal domain ISU60_03710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU60_03715 PF00348 Polyprenyl synthetase ISU60_03720 PF02609 Exonuclease VII small subunit ISU60_03725 PF02926 THUMP domain ISU60_03725 PF02568 Thiamine biosynthesis protein (ThiI) ISU60_03730 PF01965 DJ-1/PfpI family ISU60_03735 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU60_03735 PF02558 Ketopantoate reductase PanE/ApbA ISU60_03740 PF04461 Protein of unknown function (DUF520) ISU60_03745 PF07690 Major Facilitator Superfamily ISU60_03750 PF01040 UbiA prenyltransferase family ISU60_03755 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU60_03760 PF00510 Cytochrome c oxidase subunit III ISU60_03765 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU60_03770 PF06481 COX Aromatic Rich Motif ISU60_03770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU60_03775 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU60_03780 PF07690 Major Facilitator Superfamily ISU60_03785 PF03923 Uncharacterized lipoprotein ISU60_03785 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU60_03790 PF01722 BolA-like protein ISU60_03795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_03795 PF05697 Bacterial trigger factor protein (TF) ISU60_03795 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU60_03800 PF00574 Clp protease ISU60_03805 PF07724 AAA domain (Cdc48 subfamily) ISU60_03805 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_03805 PF06689 ClpX C4-type zinc finger ISU60_03810 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU60_03810 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_03810 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU60_03815 PF00216 Bacterial DNA-binding protein ISU60_03820 PF13145 PPIC-type PPIASE domain ISU60_03835 PF06508 Queuosine biosynthesis protein QueC ISU60_03840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_03840 PF12793 Sugar transport-related sRNA regulator N-term ISU60_03850 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_03855 PF01037 Lrp/AsnC ligand binding domain ISU60_03855 PF13404 AsnC-type helix-turn-helix domain ISU60_03860 PF00664 ABC transporter transmembrane region ISU60_03860 PF00005 ABC transporter ISU60_03865 PF00005 ABC transporter ISU60_03865 PF00664 ABC transporter transmembrane region ISU60_03870 PF00543 Nitrogen regulatory protein P-II ISU60_03875 PF00909 Ammonium Transporter Family ISU60_03885 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU60_03890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU60_03900 PF05321 Haemolysin expression modulating protein ISU60_03905 PF10757 Biofilm formation regulator YbaJ ISU60_03915 PF00444 Ribosomal protein L36 ISU60_03920 PF01197 Ribosomal protein L31 ISU60_03925 PF00873 AcrB/AcrD/AcrF family ISU60_03930 PF00529 HlyD membrane-fusion protein of T1SS ISU60_03930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_03935 PF00440 Bacterial regulatory proteins, tetR family ISU60_03935 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU60_03940 PF02635 DsrE/DsrF-like family ISU60_03945 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU60_03945 PF12795 Mechanosensitive ion channel porin domain ISU60_03945 PF00924 Mechanosensitive ion channel ISU60_03950 PF10689 Protein of unknown function (DUF2496) ISU60_03960 PF04304 Protein of unknown function (DUF454) ISU60_03965 PF00156 Phosphoribosyl transferase domain ISU60_03970 PF12169 DNA polymerase III subunits gamma and tau domain III ISU60_03970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU60_03970 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU60_03975 PF02575 YbaB/EbfC DNA-binding family ISU60_03980 PF02132 RecR protein ISU60_03980 PF13662 Toprim domain ISU60_03985 PF00183 Hsp90 protein ISU60_03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_03990 PF05191 Adenylate kinase, active site lid ISU60_03995 PF00762 Ferrochelatase ISU60_04000 PF00970 Oxidoreductase FAD-binding domain ISU60_04000 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_04000 PF00175 Oxidoreductase NAD-binding domain ISU60_04005 PF00483 Nucleotidyl transferase ISU60_04010 PF16363 GDP-mannose 4,6 dehydratase ISU60_04015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU60_04020 PF01370 NAD dependent epimerase/dehydratase family ISU60_04050 PF00534 Glycosyl transferases group 1 ISU60_04050 PF13439 Glycosyltransferase Family 4 ISU60_04060 PF01370 NAD dependent epimerase/dehydratase family ISU60_04065 PF01050 Mannose-6-phosphate isomerase ISU60_04065 PF00483 Nucleotidyl transferase ISU60_04070 PF00535 Glycosyl transferase family 2 ISU60_04075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_04075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_04075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_04075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_04080 PF02706 Chain length determinant protein ISU60_04085 PF00294 pfkB family carbohydrate kinase ISU60_04090 PF02254 TrkA-N domain ISU60_04090 PF00999 Sodium/hydrogen exchanger family ISU60_04095 PF07690 Major Facilitator Superfamily ISU60_04110 PF04073 Aminoacyl-tRNA editing domain ISU60_04115 PF01963 TraB family ISU60_04120 PF00403 Heavy-metal-associated domain ISU60_04125 PF13411 MerR HTH family regulatory protein ISU60_04130 PF01957 NfeD-like C-terminal, partner-binding ISU60_04135 PF01145 SPFH domain / Band 7 family ISU60_04135 PF16200 C-terminal region of band_7 ISU60_04140 PF00085 Thioredoxin ISU60_04145 PF00106 short chain dehydrogenase ISU60_04150 PF13472 GDSL-like Lipase/Acylhydrolase family ISU60_04155 PF00005 ABC transporter ISU60_04165 PF02222 ATP-grasp domain ISU60_04165 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU60_04170 PF00731 AIR carboxylase ISU60_04175 PF00149 Calcineurin-like phosphoesterase ISU60_04180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU60_04185 PF09190 DALR domain ISU60_04185 PF01406 tRNA synthetases class I (C) catalytic domain ISU60_04190 PF01797 Transposase IS200 like ISU60_04200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU60_04200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU60_04230 PF00589 Phage integrase family ISU60_04240 PF01066 CDP-alcohol phosphatidyltransferase ISU60_04250 PF01553 Acyltransferase ISU60_04255 PF12146 Serine aminopeptidase, S33 ISU60_04255 PF12147 Putative methyltransferase ISU60_04260 PF00782 Dual specificity phosphatase, catalytic domain ISU60_04275 PF01695 IstB-like ATP binding protein ISU60_04280 PF00665 Integrase core domain ISU60_04280 PF02796 Helix-turn-helix domain of resolvase ISU60_04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_04285 PF03466 LysR substrate binding domain ISU60_04290 PF00248 Aldo/keto reductase family ISU60_04295 PF00248 Aldo/keto reductase family ISU60_04305 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU60_04305 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU60_04305 PF14310 Fibronectin type III-like domain ISU60_04320 PF00872 Transposase, Mutator family ISU60_04345 PF03797 Autotransporter beta-domain ISU60_04345 PF13018 Extended Signal Peptide of Type V secretion system ISU60_04345 PF03212 Pertactin ISU60_04345 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_04360 PF05638 Type VI secretion system effector, Hcp ISU60_04380 PF13693 Winged helix-turn-helix DNA-binding ISU60_04385 PF06832 Penicillin-Binding Protein C-terminus Family ISU60_04385 PF00912 Transglycosylase ISU60_04385 PF00905 Penicillin binding protein transpeptidase domain ISU60_04390 PF01797 Transposase IS200 like ISU60_04395 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU60_04395 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU60_04395 PF17962 Bacterial macroglobulin domain 6 ISU60_04395 PF00207 Alpha-2-macroglobulin family ISU60_04395 PF01835 MG2 domain ISU60_04395 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU60_04395 PF07703 Alpha-2-macroglobulin bait region domain ISU60_04410 PF00171 Aldehyde dehydrogenase family ISU60_04415 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_04415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_04415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_04425 PF13407 Periplasmic binding protein domain ISU60_04430 PF00005 ABC transporter ISU60_04435 PF02653 Branched-chain amino acid transport system / permease component ISU60_04440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_04440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_04445 PF00294 pfkB family carbohydrate kinase ISU60_04450 PF01261 Xylose isomerase-like TIM barrel ISU60_04455 PF04962 KduI/IolB family ISU60_04465 PF00664 ABC transporter transmembrane region ISU60_04465 PF00005 ABC transporter ISU60_04490 PF00196 Bacterial regulatory proteins, luxR family ISU60_04495 PF00313 'Cold-shock' DNA-binding domain ISU60_04500 PF00313 'Cold-shock' DNA-binding domain ISU60_04505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU60_04510 PF02416 mttA/Hcf106 family ISU60_04515 PF04055 Radical SAM superfamily ISU60_04515 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU60_04520 PF03099 Biotin/lipoate A/B protein ligase family ISU60_04525 PF04359 Protein of unknown function (DUF493) ISU60_04530 PF00768 D-alanyl-D-alanine carboxypeptidase ISU60_04530 PF07943 Penicillin-binding protein 5, C-terminal domain ISU60_04535 PF05036 Sporulation related domain ISU60_04535 PF03330 Lytic transglycolase ISU60_04540 PF01098 Cell cycle protein ISU60_04545 PF00905 Penicillin binding protein transpeptidase domain ISU60_04545 PF03717 Penicillin-binding Protein dimerisation domain ISU60_04550 PF02590 Predicted SPOUT methyltransferase ISU60_04560 PF01467 Cytidylyltransferase-like ISU60_04565 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU60_04565 PF06144 DNA polymerase III, delta subunit ISU60_04570 PF04390 Lipopolysaccharide-assembly ISU60_04575 PF08264 Anticodon-binding domain of tRNA ISU60_04575 PF00133 tRNA synthetases class I (I, L, M and V) ISU60_04575 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU60_04580 PF07295 Zinc-ribbon containing domain ISU60_04585 PF00005 ABC transporter ISU60_04590 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_04595 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_04600 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_04605 PF00795 Carbon-nitrogen hydrolase ISU60_04610 PF03471 Transporter associated domain ISU60_04610 PF00571 CBS domain ISU60_04615 PF02130 Uncharacterized protein family UPF0054 ISU60_04620 PF02562 PhoH-like protein ISU60_04625 PF01938 TRAM domain ISU60_04625 PF04055 Radical SAM superfamily ISU60_04625 PF00919 Uncharacterized protein family UPF0004 ISU60_04630 PF01494 FAD binding domain ISU60_04665 PF00733 Asparagine synthase ISU60_04665 PF13537 Glutamine amidotransferase domain ISU60_04670 PF13344 Haloacid dehalogenase-like hydrolase ISU60_04675 PF01047 MarR family ISU60_04675 PF00480 ROK family ISU60_04680 PF01979 Amidohydrolase family ISU60_04685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU60_04690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU60_04690 PF00367 phosphotransferase system, EIIB ISU60_04690 PF02378 Phosphotransferase system, EIIC ISU60_04695 PF01797 Transposase IS200 like ISU60_04700 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU60_04700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU60_04705 PF03573 outer membrane porin, OprD family ISU60_04715 PF01475 Ferric uptake regulator family ISU60_04720 PF00258 Flavodoxin ISU60_04725 PF01402 Ribbon-helix-helix protein, copG family ISU60_04730 PF12697 Alpha/beta hydrolase family ISU60_04740 PF00589 Phage integrase family ISU60_04740 PF13356 Arm DNA-binding domain ISU60_04755 PF01695 IstB-like ATP binding protein ISU60_04760 PF02796 Helix-turn-helix domain of resolvase ISU60_04760 PF00665 Integrase core domain ISU60_04775 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU60_04780 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_04785 PF00571 CBS domain ISU60_04785 PF00005 ABC transporter ISU60_04790 PF00268 Ribonucleotide reductase, small chain ISU60_04795 PF00317 Ribonucleotide reductase, all-alpha domain ISU60_04795 PF08343 Ribonucleotide reductase N-terminal ISU60_04795 PF02867 Ribonucleotide reductase, barrel domain ISU60_04810 PF06392 Acid shock protein repeat ISU60_04815 PF09400 Protein of unknown function (DUF2002) ISU60_04820 PF06711 Protein of unknown function (DUF1198) ISU60_04830 PF00313 'Cold-shock' DNA-binding domain ISU60_04835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_04840 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_04845 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_04845 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_04850 PF00005 ABC transporter ISU60_04855 PF00005 ABC transporter ISU60_04860 PF00547 Urease, gamma subunit ISU60_04865 PF00699 Urease beta subunit ISU60_04870 PF00449 Urease alpha-subunit, N-terminal domain ISU60_04870 PF01979 Amidohydrolase family ISU60_04875 PF05194 UreE urease accessory protein, C-terminal domain ISU60_04875 PF02814 UreE urease accessory protein, N-terminal domain ISU60_04880 PF01730 UreF ISU60_04885 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU60_04895 PF03253 Urea transporter ISU60_04900 PF03824 High-affinity nickel-transport protein ISU60_04905 PF06411 HdeA/HdeB family ISU60_04910 PF02254 TrkA-N domain ISU60_04910 PF07885 Ion channel ISU60_04915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU60_04920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU60_04930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_04935 PF02378 Phosphotransferase system, EIIC ISU60_04940 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU60_04945 PF12833 Helix-turn-helix domain ISU60_04945 PF07883 Cupin domain ISU60_04950 PF04794 YdjC-like protein ISU60_04960 PF03925 SeqA protein C-terminal domain ISU60_04960 PF17206 SeqA protein N-terminal domain ISU60_04965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_04965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_04965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_04965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_04980 PF00486 Transcriptional regulatory protein, C terminal ISU60_04980 PF00072 Response regulator receiver domain ISU60_04985 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU60_04985 PF13493 Domain of unknown function (DUF4118) ISU60_04985 PF13492 GAF domain ISU60_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_04985 PF00512 His Kinase A (phospho-acceptor) domain ISU60_04990 PF02669 K+-transporting ATPase, c chain ISU60_05000 PF03814 Potassium-transporting ATPase A subunit ISU60_05015 PF10725 Protein of unknown function (DUF2517) ISU60_05020 PF08349 Protein of unknown function (DUF1722) ISU60_05025 PF00875 DNA photolyase ISU60_05025 PF03441 FAD binding domain of DNA photolyase ISU60_05030 PF02112 cAMP phosphodiesterases class-II ISU60_05035 PF01784 NIF3 (NGG1p interacting factor 3) ISU60_05050 PF02626 Carboxyltransferase domain, subdomain A and B ISU60_05055 PF03746 LamB/YcsF family ISU60_05070 PF01470 Pyroglutamyl peptidase ISU60_05075 PF03167 Uracil DNA glycosylase superfamily ISU60_05080 PF01228 Glycine radical ISU60_05090 PF12796 Ankyrin repeats (3 copies) ISU60_05095 PF00270 DEAD/DEAH box helicase ISU60_05095 PF00271 Helicase conserved C-terminal domain ISU60_05100 PF05175 Methyltransferase small domain ISU60_05105 PF00890 FAD binding domain ISU60_05105 PF02910 Fumarate reductase flavoprotein C-term ISU60_05110 PF08281 Sigma-70, region 4 ISU60_05110 PF04542 Sigma-70 region 2 ISU60_05115 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU60_05115 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU60_05120 PF17188 MucB/RseB C-terminal domain ISU60_05120 PF03888 MucB/RseB N-terminal domain ISU60_05135 PF03144 Elongation factor Tu domain 2 ISU60_05135 PF00009 Elongation factor Tu GTP binding domain ISU60_05135 PF00679 Elongation factor G C-terminus ISU60_05135 PF06421 GTP-binding protein LepA C-terminus ISU60_05140 PF10502 Signal peptidase, peptidase S26 ISU60_05145 PF14622 Ribonuclease-III-like ISU60_05145 PF00035 Double-stranded RNA binding motif ISU60_05150 PF01926 50S ribosome-binding GTPase ISU60_05150 PF07650 KH domain ISU60_05155 PF02565 Recombination protein O C terminal ISU60_05155 PF11967 Recombination protein O N terminal ISU60_05160 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU60_05165 PF01648 4'-phosphopantetheinyl transferase superfamily ISU60_05170 PF01797 Transposase IS200 like ISU60_05175 PF12838 4Fe-4S dicluster domain ISU60_05180 PF01418 Helix-turn-helix domain, rpiR family ISU60_05180 PF01380 SIS domain ISU60_05185 PF01380 SIS domain ISU60_05195 PF14437 MafB19-like deaminase ISU60_05200 PF01464 Transglycosylase SLT domain ISU60_05200 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_05205 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU60_05205 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU60_05205 PF02769 AIR synthase related protein, C-terminal domain ISU60_05225 PF01695 IstB-like ATP binding protein ISU60_05230 PF00665 Integrase core domain ISU60_05230 PF02796 Helix-turn-helix domain of resolvase ISU60_05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_05245 PF00512 His Kinase A (phospho-acceptor) domain ISU60_05250 PF13942 YfhG lipoprotein ISU60_05255 PF00072 Response regulator receiver domain ISU60_05255 PF00158 Sigma-54 interaction domain ISU60_05260 PF00795 Carbon-nitrogen hydrolase ISU60_05260 PF02540 NAD synthase ISU60_05265 PF00543 Nitrogen regulatory protein P-II ISU60_05270 PF14502 Helix-turn-helix domain ISU60_05270 PF14503 YhfZ C-terminal domain ISU60_05275 PF00175 Oxidoreductase NAD-binding domain ISU60_05275 PF00970 Oxidoreductase FAD-binding domain ISU60_05275 PF00042 Globin ISU60_05280 PF00464 Serine hydroxymethyltransferase ISU60_05290 PF13505 Outer membrane protein beta-barrel domain ISU60_05295 PF12832 MFS_1 like family ISU60_05300 PF00874 PRD domain ISU60_05305 PF06226 Protein of unknown function (DUF1007) ISU60_05310 PF03824 High-affinity nickel-transport protein ISU60_05315 PF00459 Inositol monophosphatase family ISU60_05320 PF00588 SpoU rRNA Methylase family ISU60_05325 PF02082 Transcriptional regulator ISU60_05330 PF00266 Aminotransferase class-V ISU60_05335 PF01592 NifU-like N terminal domain ISU60_05340 PF01521 Iron-sulphur cluster biosynthesis ISU60_05345 PF07743 HSCB C-terminal oligomerisation domain ISU60_05345 PF00226 DnaJ domain ISU60_05350 PF00012 Hsp70 protein ISU60_05355 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_05360 PF04384 Iron-sulphur cluster assembly ISU60_05365 PF00883 Cytosol aminopeptidase family, catalytic domain ISU60_05365 PF12404 Peptidase ISU60_05370 PF07179 SseB protein N-terminal domain ISU60_05370 PF14581 SseB protein C-terminal domain ISU60_05385 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_05385 PF03212 Pertactin ISU60_05385 PF03797 Autotransporter beta-domain ISU60_05390 PF03797 Autotransporter beta-domain ISU60_05390 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_05390 PF03212 Pertactin ISU60_05400 PF00334 Nucleoside diphosphate kinase ISU60_05405 PF04055 Radical SAM superfamily ISU60_05415 PF13464 Domain of unknown function (DUF4115) ISU60_05420 PF04551 GcpE protein ISU60_05425 PF13393 Histidyl-tRNA synthetase ISU60_05425 PF03129 Anticodon binding domain ISU60_05430 PF09976 Tetratricopeptide repeat-like domain ISU60_05435 PF13360 PQQ-like domain ISU60_05440 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU60_05440 PF01926 50S ribosome-binding GTPase ISU60_05450 PF07191 zinc-ribbons ISU60_05455 PF02601 Exonuclease VII, large subunit ISU60_05455 PF13742 OB-fold nucleic acid binding domain ISU60_05460 PF00478 IMP dehydrogenase / GMP reductase domain ISU60_05460 PF00571 CBS domain ISU60_05465 PF00117 Glutamine amidotransferase class-I ISU60_05465 PF02540 NAD synthase ISU60_05465 PF00958 GMP synthase C terminal domain ISU60_05470 PF01797 Transposase IS200 like ISU60_05475 PF05638 Type VI secretion system effector, Hcp ISU60_05505 PF00872 Transposase, Mutator family ISU60_05520 PF08543 Phosphomethylpyrimidine kinase ISU60_05540 PF00781 Diacylglycerol kinase catalytic domain ISU60_05545 PF16325 Peptidase family U32 C-terminal domain ISU60_05545 PF01136 Peptidase family U32 ISU60_05550 PF07411 Domain of unknown function (DUF1508) ISU60_05555 PF00486 Transcriptional regulatory protein, C terminal ISU60_05555 PF00072 Response regulator receiver domain ISU60_05565 PF07690 Major Facilitator Superfamily ISU60_05570 PF00873 AcrB/AcrD/AcrF family ISU60_05575 PF00873 AcrB/AcrD/AcrF family ISU60_05580 PF13533 Biotin-lipoyl like ISU60_05585 PF08402 TOBE domain ISU60_05585 PF00005 ABC transporter ISU60_05590 PF00392 Bacterial regulatory proteins, gntR family ISU60_05590 PF00155 Aminotransferase class I and II ISU60_05595 PF00202 Aminotransferase class-III ISU60_05605 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_05610 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_05615 PF00012 Hsp70 protein ISU60_05620 PF00571 CBS domain ISU60_05620 PF03448 MgtE intracellular N domain ISU60_05620 PF01769 Divalent cation transporter ISU60_05630 PF02541 Ppx/GppA phosphatase family ISU60_05635 PF17941 Polyphosphate kinase C-terminal domain 1 ISU60_05635 PF13089 Polyphosphate kinase N-terminal domain ISU60_05635 PF13090 Polyphosphate kinase C-terminal domain 2 ISU60_05635 PF02503 Polyphosphate kinase middle domain ISU60_05640 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_05645 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_05650 PF00005 ABC transporter ISU60_05660 PF13302 Acetyltransferase (GNAT) domain ISU60_05665 PF00551 Formyl transferase ISU60_05670 PF02769 AIR synthase related protein, C-terminal domain ISU60_05670 PF00586 AIR synthase related protein, N-terminal domain ISU60_05680 PF01797 Transposase IS200 like ISU60_05685 PF00308 Bacterial dnaA protein ISU60_05690 PF03960 ArsC family ISU60_05695 PF07720 Tetratricopeptide repeat ISU60_05695 PF01435 Peptidase family M48 ISU60_05700 PF01594 AI-2E family transporter ISU60_05710 PF00578 AhpC/TSA family ISU60_05715 PF01842 ACT domain ISU60_05720 PF00701 Dihydrodipicolinate synthetase family ISU60_05725 PF06804 NlpB/DapX lipoprotein ISU60_05730 PF01797 Transposase IS200 like ISU60_05735 PF01259 SAICAR synthetase ISU60_05740 PF04228 Putative neutral zinc metallopeptidase ISU60_05745 PF04284 Protein of unknown function (DUF441) ISU60_05750 PF13718 GNAT acetyltransferase 2 ISU60_05750 PF08351 Domain of unknown function (DUF1726) ISU60_05750 PF17176 tRNA-binding domain ISU60_05750 PF05127 Helicase ISU60_05755 PF13980 Uncharacterised protein family (UPF0370) ISU60_05760 PF02557 D-alanyl-D-alanine carboxypeptidase ISU60_05765 PF07687 Peptidase dimerisation domain ISU60_05765 PF01546 Peptidase family M20/M25/M40 ISU60_05770 PF03960 ArsC family ISU60_05785 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_05790 PF00005 ABC transporter ISU60_05790 PF08402 TOBE domain ISU60_05800 PF00884 Sulfatase ISU60_05805 PF13186 Iron-sulfur cluster-binding domain ISU60_05805 PF04055 Radical SAM superfamily ISU60_05810 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU60_05820 PF00873 AcrB/AcrD/AcrF family ISU60_05830 PF00196 Bacterial regulatory proteins, luxR family ISU60_05830 PF00072 Response regulator receiver domain ISU60_05835 PF12800 4Fe-4S binding domain ISU60_05835 PF13187 4Fe-4S dicluster domain ISU60_05835 PF00037 4Fe-4S binding domain ISU60_05840 PF03927 NapD protein ISU60_05845 PF01568 Molydopterin dinucleotide binding domain ISU60_05845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_05845 PF00384 Molybdopterin oxidoreductase ISU60_05845 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU60_05850 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU60_05855 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU60_05860 PF00293 NUDIX domain ISU60_05865 PF01515 Phosphate acetyl/butaryl transferase ISU60_05865 PF03949 Malic enzyme, NAD binding domain ISU60_05865 PF00390 Malic enzyme, N-terminal domain ISU60_05870 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU60_05875 PF01218 Coproporphyrinogen III oxidase ISU60_05880 PF00583 Acetyltransferase (GNAT) family ISU60_05890 PF03212 Pertactin ISU60_05890 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_05890 PF03797 Autotransporter beta-domain ISU60_05890 PF13018 Extended Signal Peptide of Type V secretion system ISU60_05895 PF04076 Bacterial OB fold (BOF) protein ISU60_05900 PF06572 Protein of unknown function (DUF1131) ISU60_05905 PF04261 Dyp-type peroxidase family ISU60_05910 PF00701 Dihydrodipicolinate synthetase family ISU60_05915 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU60_05920 PF12468 Type III secretion system leucine rich repeat protein ISU60_05925 PF00480 ROK family ISU60_05930 PF04074 YhcH/YjgK/YiaL ISU60_05935 PF01380 SIS domain ISU60_05935 PF01418 Helix-turn-helix domain, rpiR family ISU60_05940 PF07690 Major Facilitator Superfamily ISU60_05950 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_05955 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_05960 PF00005 ABC transporter ISU60_05975 PF00072 Response regulator receiver domain ISU60_05975 PF00486 Transcriptional regulatory protein, C terminal ISU60_05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_05980 PF00512 His Kinase A (phospho-acceptor) domain ISU60_05980 PF00672 HAMP domain ISU60_05990 PF00155 Aminotransferase class I and II ISU60_06000 PF00557 Metallopeptidase family M24 ISU60_06010 PF00474 Sodium:solute symporter family ISU60_06015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_06015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_06020 PF00005 ABC transporter ISU60_06020 PF02687 FtsX-like permease family ISU60_06020 PF12704 MacB-like periplasmic core domain ISU60_06025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_06030 PF00072 Response regulator receiver domain ISU60_06030 PF00486 Transcriptional regulatory protein, C terminal ISU60_06035 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU60_06035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_06035 PF00512 His Kinase A (phospho-acceptor) domain ISU60_06035 PF00672 HAMP domain ISU60_06045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU60_06050 PF05524 PEP-utilising enzyme, N-terminal ISU60_06050 PF00391 PEP-utilising enzyme, mobile domain ISU60_06050 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_06055 PF00381 PTS HPr component phosphorylation site ISU60_06060 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_06070 PF04354 ZipA, C-terminal FtsZ-binding domain ISU60_06075 PF01653 NAD-dependent DNA ligase adenylation domain ISU60_06075 PF00533 BRCA1 C Terminus (BRCT) domain ISU60_06075 PF12826 Helix-hairpin-helix motif ISU60_06075 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU60_06075 PF03120 NAD-dependent DNA ligase OB-fold domain ISU60_06080 PF12843 Putative quorum-sensing-regulated virulence factor ISU60_06105 PF01797 Transposase IS200 like ISU60_06110 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU60_06145 PF07670 Nucleoside recognition ISU60_06145 PF07662 Na+ dependent nucleoside transporter C-terminus ISU60_06145 PF01773 Na+ dependent nucleoside transporter N-terminus ISU60_06150 PF01566 Natural resistance-associated macrophage protein ISU60_06160 PF00248 Aldo/keto reductase family ISU60_06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_06165 PF03466 LysR substrate binding domain ISU60_06175 PF02685 Glucokinase ISU60_06180 PF07350 Protein of unknown function (DUF1479) ISU60_06185 PF00155 Aminotransferase class I and II ISU60_06190 PF01292 Prokaryotic cytochrome b561 ISU60_06200 PF03783 Curli production assembly/transport component CsgG ISU60_06210 PF05643 Putative bacterial lipoprotein (DUF799) ISU60_06220 PF02613 Nitrate reductase delta subunit ISU60_06225 PF04976 DMSO reductase anchor subunit (DmsC) ISU60_06230 PF12800 4Fe-4S binding domain ISU60_06230 PF13247 4Fe-4S dicluster domain ISU60_06235 PF01568 Molydopterin dinucleotide binding domain ISU60_06235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_06235 PF00384 Molybdopterin oxidoreductase ISU60_06245 PF05638 Type VI secretion system effector, Hcp ISU60_06255 PF00005 ABC transporter ISU60_06260 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_06270 PF13406 Transglycosylase SLT domain ISU60_06315 PF05947 Type VI secretion system, TssF ISU60_06320 PF07724 AAA domain (Cdc48 subfamily) ISU60_06320 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_06320 PF17871 AAA lid domain ISU60_06320 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_06325 PF16970 Type-1 fimbrial protein, A ISU60_06330 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_06330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_06335 PF13954 PapC N-terminal domain ISU60_06335 PF13953 PapC C-terminal domain ISU60_06335 PF00577 Outer membrane usher protein ISU60_06340 PF00872 Transposase, Mutator family ISU60_06345 PF00577 Outer membrane usher protein ISU60_06345 PF13954 PapC N-terminal domain ISU60_06345 PF13953 PapC C-terminal domain ISU60_06355 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU60_06360 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_06375 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU60_06385 PF00665 Integrase core domain ISU60_06385 PF02796 Helix-turn-helix domain of resolvase ISU60_06390 PF01695 IstB-like ATP binding protein ISU60_06400 PF06761 Intracellular multiplication and human macrophage-killing ISU60_06400 PF14331 ImcF-related N-terminal domain ISU60_06400 PF06744 Type VI secretion protein IcmF C-terminal ISU60_06405 PF04717 Type VI secretion system, phage-baseplate injector ISU60_06420 PF07024 ImpE protein ISU60_06435 PF08274 PhnA Zinc-Ribbon ISU60_06435 PF03831 PhnA domain ISU60_06445 PF04011 LemA family ISU60_06460 PF00005 ABC transporter ISU60_06465 PF03379 CcmB protein ISU60_06470 PF01578 Cytochrome C assembly protein ISU60_06475 PF04995 Heme exporter protein D (CcmD) ISU60_06480 PF03100 CcmE ISU60_06485 PF01578 Cytochrome C assembly protein ISU60_06485 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU60_06490 PF08534 Redoxin ISU60_06495 PF03918 Cytochrome C biogenesis protein ISU60_06500 PF03918 Cytochrome C biogenesis protein ISU60_06505 PF04333 MlaA lipoprotein ISU60_06510 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU60_06515 PF04175 Protein of unknown function (DUF406) ISU60_06520 PF02803 Thiolase, C-terminal domain ISU60_06520 PF00108 Thiolase, N-terminal domain ISU60_06525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU60_06525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU60_06525 PF00378 Enoyl-CoA hydratase/isomerase ISU60_06530 PF00300 Histidine phosphatase superfamily (branch 1) ISU60_06540 PF01713 Smr domain ISU60_06545 PF05175 Methyltransferase small domain ISU60_06550 PF01264 Chorismate synthase ISU60_06555 PF03411 Penicillin-insensitive murein endopeptidase ISU60_06560 PF01925 Sulfite exporter TauE/SafE ISU60_06565 PF04315 Elongation factor P hydroxylase ISU60_06570 PF08891 YfcL protein ISU60_06575 PF01266 FAD dependent oxidoreductase ISU60_06575 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU60_06580 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_06580 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_06585 PF01177 Asp/Glu/Hydantoin racemase ISU60_06590 PF00419 Fimbrial protein ISU60_06600 PF00892 EamA-like transporter family ISU60_06610 PF11890 Domain of unknown function (DUF3410) ISU60_06610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_06610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_06615 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU60_06615 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU60_06620 PF01416 tRNA pseudouridine synthase ISU60_06625 PF09335 SNARE associated Golgi protein ISU60_06630 PF01039 Carboxyl transferase domain ISU60_06630 PF17848 Acetyl-coA carboxylase zinc finger domain ISU60_06635 PF08245 Mur ligase middle domain ISU60_06635 PF02875 Mur ligase family, glutamate ligase domain ISU60_06640 PF05036 Sporulation related domain ISU60_06645 PF02674 Colicin V production protein ISU60_06650 PF00156 Phosphoribosyl transferase domain ISU60_06655 PF02441 Flavoprotein ISU60_06660 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_06665 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_06670 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_06675 PF00005 ABC transporter ISU60_06680 PF01370 NAD dependent epimerase/dehydratase family ISU60_06680 PF08338 Domain of unknown function (DUF1731) ISU60_06690 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU60_06695 PF00293 NUDIX domain ISU60_06710 PF00872 Transposase, Mutator family ISU60_06720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_06725 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_06725 PF00356 Bacterial regulatory proteins, lacI family ISU60_06730 PF07085 DRTGG domain ISU60_06730 PF01515 Phosphate acetyl/butaryl transferase ISU60_06735 PF00871 Acetokinase family ISU60_06740 PF04217 Protein of unknown function, DUF412 ISU60_06745 PF03887 YfbU domain ISU60_06750 PF13419 Haloacid dehalogenase-like hydrolase ISU60_06755 PF03600 Citrate transporter ISU60_06755 PF02080 TrkA-C domain ISU60_06765 PF00155 Aminotransferase class I and II ISU60_06770 PF03466 LysR substrate binding domain ISU60_06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_06775 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU60_06780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU60_06785 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU60_06785 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU60_06795 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU60_06795 PF10531 SLBB domain ISU60_06795 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU60_06800 PF00384 Molybdopterin oxidoreductase ISU60_06800 PF01568 Molydopterin dinucleotide binding domain ISU60_06800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU60_06800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_06805 PF00146 NADH dehydrogenase ISU60_06810 PF12838 4Fe-4S dicluster domain ISU60_06815 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU60_06820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU60_06825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU60_06825 PF00361 Proton-conducting membrane transporter ISU60_06830 PF00361 Proton-conducting membrane transporter ISU60_06835 PF00361 Proton-conducting membrane transporter ISU60_06845 PF04074 YhcH/YjgK/YiaL ISU60_06850 PF01202 Shikimate kinase ISU60_06855 PF00106 short chain dehydrogenase ISU60_06860 PF02638 Glycosyl hydrolase-like 10 ISU60_06865 PF00356 Bacterial regulatory proteins, lacI family ISU60_06870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_06870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_06875 PF07690 Major Facilitator Superfamily ISU60_06880 PF03928 Haem-degrading ISU60_06885 PF00920 Dehydratase family ISU60_06890 PF05957 Bacterial protein of unknown function (DUF883) ISU60_06900 PF00425 chorismate binding enzyme ISU60_06905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_06905 PF16582 Middle domain of thiamine pyrophosphate ISU60_06905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_06910 PF12697 Alpha/beta hydrolase family ISU60_06915 PF00378 Enoyl-CoA hydratase/isomerase ISU60_06920 PF13378 Enolase C-terminal domain-like ISU60_06930 PF02885 Glycosyl transferase family, helical bundle domain ISU60_06935 PF07338 Protein of unknown function (DUF1471) ISU60_06940 PF05971 RNA methyltransferase ISU60_06950 PF01695 IstB-like ATP binding protein ISU60_06955 PF00665 Integrase core domain ISU60_06955 PF02796 Helix-turn-helix domain of resolvase ISU60_06960 PF13426 PAS domain ISU60_06960 PF08447 PAS fold ISU60_06960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_06965 PF00005 ABC transporter ISU60_06970 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_06975 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_06985 PF00210 Ferritin-like domain ISU60_06990 PF13649 Methyltransferase domain ISU60_07000 PF00892 EamA-like transporter family ISU60_07005 PF13505 Outer membrane protein beta-barrel domain ISU60_07025 PF00107 Zinc-binding dehydrogenase ISU60_07025 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_07030 PF13407 Periplasmic binding protein domain ISU60_07035 PF00005 ABC transporter ISU60_07040 PF02653 Branched-chain amino acid transport system / permease component ISU60_07045 PF00356 Bacterial regulatory proteins, lacI family ISU60_07050 PF03466 LysR substrate binding domain ISU60_07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_07055 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU60_07065 PF02028 BCCT, betaine/carnitine/choline family transporter ISU60_07070 PF00355 Rieske [2Fe-2S] domain ISU60_07070 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ISU60_07075 PF00970 Oxidoreductase FAD-binding domain ISU60_07075 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_07075 PF00175 Oxidoreductase NAD-binding domain ISU60_07080 PF17287 POTRA domain ISU60_07080 PF08479 POTRA domain, ShlB-type ISU60_07080 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_07085 PF04829 Pre-toxin domain with VENN motif ISU60_07085 PF05860 haemagglutination activity domain ISU60_07085 PF13332 Hemagglutinin repeat ISU60_07085 PF13018 Extended Signal Peptide of Type V secretion system ISU60_07125 PF04829 Pre-toxin domain with VENN motif ISU60_07125 PF15526 Novel toxin 21 ISU60_07125 PF05860 haemagglutination activity domain ISU60_07125 PF05594 Haemagluttinin repeat ISU60_07125 PF13332 Hemagglutinin repeat ISU60_07135 PF17912 MalK OB fold domain ISU60_07135 PF00005 ABC transporter ISU60_07140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_07140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_07140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_07140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_07145 PF00356 Bacterial regulatory proteins, lacI family ISU60_07155 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_07160 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_07165 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU60_07185 PF00924 Mechanosensitive ion channel ISU60_07190 PF01867 CRISPR associated protein Cas1 ISU60_07200 PF09611 CRISPR-associated protein (Cas_Csy1) ISU60_07205 PF09614 CRISPR-associated protein (Cas_Csy2) ISU60_07210 PF09615 CRISPR-associated protein (Cas_Csy3) ISU60_07215 PF09618 CRISPR-associated protein (Cas_Csy4) ISU60_07220 PF00248 Aldo/keto reductase family ISU60_07230 PF00083 Sugar (and other) transporter ISU60_07240 PF03466 LysR substrate binding domain ISU60_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_07245 PF03472 Autoinducer binding domain ISU60_07245 PF00196 Bacterial regulatory proteins, luxR family ISU60_07250 PF00765 Autoinducer synthase ISU60_07265 PF12368 Rhodanase C-terminal ISU60_07265 PF00581 Rhodanese-like domain ISU60_07265 PF17773 UPF0176 acylphosphatase like domain ISU60_07270 PF01594 AI-2E family transporter ISU60_07280 PF00196 Bacterial regulatory proteins, luxR family ISU60_07285 PF01266 FAD dependent oxidoreductase ISU60_07290 PF00872 Transposase, Mutator family ISU60_07295 PF13991 BssS protein family ISU60_07300 PF06183 DinI-like family ISU60_07305 PF01979 Amidohydrolase family ISU60_07310 PF03992 Antibiotic biosynthesis monooxygenase ISU60_07320 PF00872 Transposase, Mutator family ISU60_07325 PF00575 S1 RNA binding domain ISU60_07325 PF10150 Ribonuclease E/G family ISU60_07325 PF12111 Polyribonucleotide phosphorylase C terminal ISU60_07330 PF00849 RNA pseudouridylate synthase ISU60_07330 PF01479 S4 domain ISU60_07335 PF02545 Maf-like protein ISU60_07340 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU60_07345 PF01783 Ribosomal L32p protein family ISU60_07350 PF02504 Fatty acid synthesis protein ISU60_07355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU60_07355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU60_07360 PF00698 Acyl transferase domain ISU60_07370 PF00550 Phosphopantetheine attachment site ISU60_07375 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_07375 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_07385 PF01063 Amino-transferase class IV ISU60_07390 PF02618 YceG-like family ISU60_07395 PF02223 Thymidylate kinase ISU60_07400 PF09115 DNA polymerase III, delta subunit, C terminal ISU60_07405 PF01026 TatD related DNase ISU60_07410 PF02378 Phosphotransferase system, EIIC ISU60_07410 PF00367 phosphotransferase system, EIIB ISU60_07420 PF08501 Shikimate dehydrogenase substrate binding domain ISU60_07425 PF01230 HIT domain ISU60_07430 PF07233 Protein of unknown function (DUF1425) ISU60_07435 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU60_07435 PF13036 Peptidoglycan-synthase activator LpoB ISU60_07440 PF01636 Phosphotransferase enzyme family ISU60_07445 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU60_07450 PF05728 Uncharacterised protein family (UPF0227) ISU60_07455 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_07470 PF00872 Transposase, Mutator family ISU60_07475 PF05433 Glycine zipper 2TM domain ISU60_07480 PF00270 DEAD/DEAH box helicase ISU60_07480 PF00271 Helicase conserved C-terminal domain ISU60_07480 PF03461 TRCF domain ISU60_07480 PF02559 CarD-like/TRCF domain ISU60_07480 PF17757 UvrB interaction domain ISU60_07485 PF02687 FtsX-like permease family ISU60_07485 PF12704 MacB-like periplasmic core domain ISU60_07490 PF00005 ABC transporter ISU60_07495 PF12704 MacB-like periplasmic core domain ISU60_07495 PF02687 FtsX-like permease family ISU60_07500 PF00480 ROK family ISU60_07505 PF00480 ROK family ISU60_07510 PF02146 Sir2 family ISU60_07515 PF01546 Peptidase family M20/M25/M40 ISU60_07515 PF07687 Peptidase dimerisation domain ISU60_07520 PF08007 Cupin superfamily protein ISU60_07525 PF08918 PhoQ Sensor ISU60_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_07530 PF00072 Response regulator receiver domain ISU60_07530 PF00486 Transcriptional regulatory protein, C terminal ISU60_07540 PF08328 Adenylosuccinate lyase C-terminal ISU60_07540 PF00206 Lyase ISU60_07545 PF04356 Protein of unknown function (DUF489) ISU60_07555 PF00293 NUDIX domain ISU60_07560 PF00849 RNA pseudouridylate synthase ISU60_07565 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU60_07570 PF00356 Bacterial regulatory proteins, lacI family ISU60_07570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_07580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_07580 PF08447 PAS fold ISU60_07585 PF05368 NmrA-like family ISU60_07590 PF01638 HxlR-like helix-turn-helix ISU60_07600 PF00328 Histidine phosphatase superfamily (branch 2) ISU60_07605 PF14001 YdfZ protein ISU60_07615 PF01037 Lrp/AsnC ligand binding domain ISU60_07615 PF13404 AsnC-type helix-turn-helix domain ISU60_07625 PF10777 Inner membrane protein YlaC ISU60_07630 PF00550 Phosphopantetheine attachment site ISU60_07630 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_07630 PF08659 KR domain ISU60_07630 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_07630 PF00698 Acyl transferase domain ISU60_07630 PF00107 Zinc-binding dehydrogenase ISU60_07630 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_07630 PF16197 Ketoacyl-synthetase C-terminal extension ISU60_07630 PF14765 Polyketide synthase dehydratase ISU60_07635 PF02929 Beta galactosidase small chain ISU60_07635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU60_07635 PF00703 Glycosyl hydrolases family 2 ISU60_07635 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU60_07635 PF16353 Domain of unknown function(DUF4981) ISU60_07640 PF00313 'Cold-shock' DNA-binding domain ISU60_07645 PF10781 Dextransucrase DSRB ISU60_07655 PF02308 MgtC family ISU60_07660 PF00689 Cation transporting ATPase, C-terminus ISU60_07660 PF00690 Cation transporter/ATPase, N-terminus ISU60_07670 PF05280 Flagellar transcriptional activator (FlhC) ISU60_07675 PF01618 MotA/TolQ/ExbB proton channel family ISU60_07680 PF00691 OmpA family ISU60_07680 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU60_07685 PF01584 CheW-like domain ISU60_07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_07685 PF02895 Signal transducing histidine kinase, homodimeric domain ISU60_07685 PF01627 Hpt domain ISU60_07685 PF09078 CheY binding ISU60_07690 PF01584 CheW-like domain ISU60_07695 PF07690 Major Facilitator Superfamily ISU60_07700 PF01042 Endoribonuclease L-PSP ISU60_07710 PF13309 HTH domain ISU60_07710 PF08348 YheO-like PAS domain ISU60_07715 PF12951 Passenger-associated-transport-repeat ISU60_07730 PF00672 HAMP domain ISU60_07730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_07730 PF02203 Tar ligand binding domain homologue ISU60_07735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_07735 PF00672 HAMP domain ISU60_07735 PF02203 Tar ligand binding domain homologue ISU60_07740 PF03705 CheR methyltransferase, all-alpha domain ISU60_07740 PF01739 CheR methyltransferase, SAM binding domain ISU60_07745 PF00072 Response regulator receiver domain ISU60_07745 PF01339 CheB methylesterase ISU60_07750 PF00072 Response regulator receiver domain ISU60_07755 PF04344 Chemotaxis phosphatase, CheZ ISU60_07760 PF01510 N-acetylmuramoyl-L-alanine amidase ISU60_07765 PF03895 YadA-like membrane anchor domain ISU60_07765 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_07765 PF05658 Head domain of trimeric autotransporter adhesin ISU60_07765 PF13018 Extended Signal Peptide of Type V secretion system ISU60_07770 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_07770 PF03895 YadA-like membrane anchor domain ISU60_07770 PF13018 Extended Signal Peptide of Type V secretion system ISU60_07770 PF05658 Head domain of trimeric autotransporter adhesin ISU60_07780 PF01168 Alanine racemase, N-terminal domain ISU60_07780 PF00842 Alanine racemase, C-terminal domain ISU60_07805 PF01695 IstB-like ATP binding protein ISU60_07810 PF00665 Integrase core domain ISU60_07810 PF02796 Helix-turn-helix domain of resolvase ISU60_07820 PF07351 Protein of unknown function (DUF1480) ISU60_07835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_07835 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_07855 PF02470 MlaD protein ISU60_07860 PF04403 Paraquat-inducible protein A ISU60_07865 PF13185 GAF domain ISU60_07870 PF17516 ProQ C-terminal domain ISU60_07870 PF04352 ProQ/FINO family ISU60_07875 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU60_07875 PF03572 Peptidase family S41 ISU60_07875 PF17804 Tail specific protease N-terminal domain ISU60_07875 PF00595 PDZ domain ISU60_07880 PF01435 Peptidase family M48 ISU60_07885 PF00419 Fimbrial protein ISU60_07890 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_07890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_07895 PF13954 PapC N-terminal domain ISU60_07895 PF00577 Outer membrane usher protein ISU60_07895 PF13953 PapC C-terminal domain ISU60_07905 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_07905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_07910 PF07690 Major Facilitator Superfamily ISU60_07915 PF14583 Oligogalacturonate lyase ISU60_07920 PF01614 Bacterial transcriptional regulator ISU60_07920 PF09339 IclR helix-turn-helix domain ISU60_07925 PF01510 N-acetylmuramoyl-L-alanine amidase ISU60_07930 PF00375 Sodium:dicarboxylate symporter family ISU60_07935 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU60_07940 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU60_07945 PF01547 Bacterial extracellular solute-binding protein ISU60_07955 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_07960 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_07965 PF06917 Periplasmic pectate lyase ISU60_07975 PF04962 KduI/IolB family ISU60_07980 PF07883 Cupin domain ISU60_07985 PF00872 Transposase, Mutator family ISU60_07990 PF13419 Haloacid dehalogenase-like hydrolase ISU60_07995 PF14002 YniB-like protein ISU60_08000 PF03881 Fructosamine kinase ISU60_08010 PF00950 ABC 3 transport family ISU60_08015 PF00950 ABC 3 transport family ISU60_08020 PF00005 ABC transporter ISU60_08025 PF01297 Zinc-uptake complex component A periplasmic ISU60_08030 PF01464 Transglycosylase SLT domain ISU60_08035 PF01914 MarC family integral membrane protein ISU60_08045 PF13619 KTSC domain ISU60_08050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU60_08050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU60_08050 PF03129 Anticodon binding domain ISU60_08050 PF02824 TGS domain ISU60_08055 PF00707 Translation initiation factor IF-3, C-terminal domain ISU60_08055 PF05198 Translation initiation factor IF-3, N-terminal domain ISU60_08060 PF01632 Ribosomal protein L35 ISU60_08065 PF00453 Ribosomal protein L20 ISU60_08075 PF01409 tRNA synthetases class II core domain (F) ISU60_08075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU60_08080 PF03483 B3/4 domain ISU60_08080 PF03484 tRNA synthetase B5 domain ISU60_08080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU60_08080 PF03147 Ferredoxin-fold anticodon binding domain ISU60_08080 PF01588 Putative tRNA binding domain ISU60_08085 PF00216 Bacterial DNA-binding protein ISU60_08095 PF01032 FecCD transport family ISU60_08100 PF00255 Glutathione peroxidase ISU60_08105 PF00005 ABC transporter ISU60_08110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU60_08115 PF00535 Glycosyl transferase family 2 ISU60_08120 PF00551 Formyl transferase ISU60_08120 PF01370 NAD dependent epimerase/dehydratase family ISU60_08120 PF02911 Formyl transferase, C-terminal domain ISU60_08125 PF01522 Polysaccharide deacetylase ISU60_08130 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU60_08135 PF00892 EamA-like transporter family ISU60_08150 PF00877 NlpC/P60 family ISU60_08155 PF10437 Bacterial lipoate protein ligase C-terminus ISU60_08155 PF03099 Biotin/lipoate A/B protein ligase family ISU60_08165 PF00793 DAHP synthetase I family ISU60_08170 PF03618 Kinase/pyrophosphorylase ISU60_08175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU60_08175 PF00391 PEP-utilising enzyme, mobile domain ISU60_08175 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_08185 PF01594 AI-2E family transporter ISU60_08190 PF02913 FAD linked oxidases, C-terminal domain ISU60_08190 PF01565 FAD binding domain ISU60_08190 PF13183 4Fe-4S dicluster domain ISU60_08195 PF03061 Thioesterase superfamily ISU60_08200 PF01521 Iron-sulphur cluster biosynthesis ISU60_08205 PF01458 Uncharacterized protein family (UPF0051) ISU60_08210 PF00005 ABC transporter ISU60_08215 PF01458 Uncharacterized protein family (UPF0051) ISU60_08220 PF00266 Aminotransferase class-V ISU60_08225 PF02657 Fe-S metabolism associated domain ISU60_08230 PF17969 L,D-transpeptidase C-terminal domain ISU60_08230 PF01476 LysM domain ISU60_08230 PF03734 L,D-transpeptidase catalytic domain ISU60_08235 PF01695 IstB-like ATP binding protein ISU60_08240 PF02796 Helix-turn-helix domain of resolvase ISU60_08240 PF00665 Integrase core domain ISU60_08250 PF04728 Lipoprotein leucine-zipper ISU60_08255 PF00224 Pyruvate kinase, barrel domain ISU60_08255 PF02887 Pyruvate kinase, alpha/beta domain ISU60_08270 PF01554 MatE ISU60_08280 PF00677 Lumazine binding domain ISU60_08290 PF07690 Major Facilitator Superfamily ISU60_08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_08295 PF03466 LysR substrate binding domain ISU60_08300 PF00356 Bacterial regulatory proteins, lacI family ISU60_08310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU60_08310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU60_08315 PF00877 NlpC/P60 family ISU60_08320 PF00462 Glutaredoxin ISU60_08330 PF00929 Exonuclease ISU60_08335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU60_08340 PF14431 YwqJ-like deaminase ISU60_08340 PF18807 Tripartite Tc toxins repeat ISU60_08345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU60_08350 PF16925 Tetracyclin repressor-like, C-terminal domain ISU60_08350 PF00440 Bacterial regulatory proteins, tetR family ISU60_08355 PF00884 Sulfatase ISU60_08355 PF08019 Phosphoethanolamine transferase EptA/EptB ISU60_08360 PF06945 Protein of unknown function (DUF1289) ISU60_08365 PF00248 Aldo/keto reductase family ISU60_08370 PF01047 MarR family ISU60_08375 PF05433 Glycine zipper 2TM domain ISU60_08380 PF03702 Anhydro-N-acetylmuramic acid kinase ISU60_08385 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU60_08390 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU60_08390 PF01243 Pyridoxamine 5'-phosphate oxidase ISU60_08395 PF00579 tRNA synthetases class I (W and Y) ISU60_08395 PF01479 S4 domain ISU60_08400 PF08543 Phosphomethylpyrimidine kinase ISU60_08405 PF02798 Glutathione S-transferase, N-terminal domain ISU60_08405 PF00043 Glutathione S-transferase, C-terminal domain ISU60_08410 PF11656 YjbD family (DUF3811) ISU60_08415 PF04893 Yip1 domain ISU60_08420 PF00854 POT family ISU60_08430 PF00005 ABC transporter ISU60_08435 PF00005 ABC transporter ISU60_08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_08440 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_08440 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_08445 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_08450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_08460 PF00158 Sigma-54 interaction domain ISU60_08460 PF02954 Bacterial regulatory protein, Fis family ISU60_08465 PF04012 PspA/IM30 family ISU60_08470 PF06667 Phage shock protein B ISU60_08475 PF04024 PspC domain ISU60_08485 PF04317 YcjX-like family, DUF463 ISU60_08490 PF05128 Domain of unknown function (DUF697) ISU60_08495 PF08808 RES domain ISU60_08500 PF09722 Protein of unknown function (DUF2384) ISU60_08505 PF18024 Helix-turn-helix domain ISU60_08505 PF00158 Sigma-54 interaction domain ISU60_08510 PF01797 Transposase IS200 like ISU60_08515 PF08534 Redoxin ISU60_08520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU60_08520 PF13378 Enolase C-terminal domain-like ISU60_08525 PF00246 Zinc carboxypeptidase ISU60_08530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_08535 PF01544 CorA-like Mg2+ transporter protein ISU60_08550 PF07859 alpha/beta hydrolase fold ISU60_08555 PF01171 PP-loop family ISU60_08560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_08560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU60_08560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU60_08560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU60_08560 PF10371 Domain of unknown function ISU60_08565 PF00893 Small Multidrug Resistance protein ISU60_08570 PF02308 MgtC family ISU60_08575 PF03891 Domain of unknown function (DUF333) ISU60_08580 PF03724 META domain ISU60_08585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_08585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_08590 PF11739 Dicarboxylate transport ISU60_08595 PF13617 YnbE-like lipoprotein ISU60_08600 PF07027 Protein of unknown function (DUF1318) ISU60_08605 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_08605 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_08610 PF04198 Putative sugar-binding domain ISU60_08610 PF00325 Bacterial regulatory proteins, crp family ISU60_08615 PF02525 Flavodoxin-like fold ISU60_08620 PF11898 Domain of unknown function (DUF3418) ISU60_08620 PF04408 Helicase associated domain (HA2) ISU60_08620 PF00271 Helicase conserved C-terminal domain ISU60_08620 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU60_08620 PF00270 DEAD/DEAH box helicase ISU60_08635 PF00089 Trypsin ISU60_08645 PF01292 Prokaryotic cytochrome b561 ISU60_08650 PF04264 YceI-like domain ISU60_08670 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU60_08675 PF00512 His Kinase A (phospho-acceptor) domain ISU60_08675 PF00672 HAMP domain ISU60_08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_08680 PF00072 Response regulator receiver domain ISU60_08680 PF00486 Transcriptional regulatory protein, C terminal ISU60_08690 PF13520 Amino acid permease ISU60_08695 PF07338 Protein of unknown function (DUF1471) ISU60_08700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU60_08700 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU60_08700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU60_08705 PF02233 NAD(P) transhydrogenase beta subunit ISU60_08710 PF00582 Universal stress protein family ISU60_08715 PF00027 Cyclic nucleotide-binding domain ISU60_08715 PF13545 Crp-like helix-turn-helix domain ISU60_08720 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU60_08720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU60_08725 PF00245 Alkaline phosphatase ISU60_08735 PF13419 Haloacid dehalogenase-like hydrolase ISU60_08740 PF01842 ACT domain ISU60_08745 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_08745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_08745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_08775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU60_08775 PF01048 Phosphorylase superfamily ISU60_08780 PF00005 ABC transporter ISU60_08785 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_08790 PF09084 NMT1/THI5 like ISU60_08805 PF00356 Bacterial regulatory proteins, lacI family ISU60_08810 PF00654 Voltage gated chloride channel ISU60_08820 PF00480 ROK family ISU60_08825 PF03466 LysR substrate binding domain ISU60_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_08830 PF07690 Major Facilitator Superfamily ISU60_08835 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU60_08840 PF10415 Fumarase C C-terminus ISU60_08840 PF00206 Lyase ISU60_08845 PF01238 Phosphomannose isomerase type I ISU60_08850 PF06097 Bacterial protein of unknown function (DUF945) ISU60_08860 PF13593 SBF-like CPA transporter family (DUF4137) ISU60_08865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_08865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_08870 PF12833 Helix-turn-helix domain ISU60_08870 PF02311 AraC-like ligand binding domain ISU60_08875 PF02653 Branched-chain amino acid transport system / permease component ISU60_08880 PF00005 ABC transporter ISU60_08885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_08890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_08895 PF11762 L-arabinose isomerase C-terminal domain ISU60_08895 PF02610 L-arabinose isomerase ISU60_08900 PF00664 ABC transporter transmembrane region ISU60_08900 PF00005 ABC transporter ISU60_08900 PF03412 Peptidase C39 family ISU60_08910 PF13533 Biotin-lipoyl like ISU60_08915 PF00005 ABC transporter ISU60_08915 PF00664 ABC transporter transmembrane region ISU60_08920 PF03412 Peptidase C39 family ISU60_08920 PF00005 ABC transporter ISU60_08920 PF00664 ABC transporter transmembrane region ISU60_08925 PF10754 Protein of unknown function (DUF2569) ISU60_08930 PF02508 Rnf-Nqr subunit, membrane protein ISU60_08935 PF04060 Putative Fe-S cluster ISU60_08940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU60_08940 PF13237 4Fe-4S dicluster domain ISU60_08940 PF13375 RnfC Barrel sandwich hybrid domain ISU60_08940 PF10531 SLBB domain ISU60_08945 PF06445 GyrI-like small molecule binding domain ISU60_08945 PF12833 Helix-turn-helix domain ISU60_08950 PF03116 NQR2, RnfD, RnfE family ISU60_08955 PF04205 FMN-binding domain ISU60_08960 PF02508 Rnf-Nqr subunit, membrane protein ISU60_08965 PF10576 Iron-sulfur binding domain of endonuclease III ISU60_08965 PF00633 Helix-hairpin-helix motif ISU60_08965 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU60_08970 PF01370 NAD dependent epimerase/dehydratase family ISU60_08975 PF07690 Major Facilitator Superfamily ISU60_08980 PF17876 Cold shock domain ISU60_08980 PF08206 Ribonuclease B OB domain ISU60_08980 PF00773 RNB domain ISU60_08980 PF00575 S1 RNA binding domain ISU60_08985 PF02554 Carbon starvation protein CstA ISU60_08985 PF13722 5TM C-terminal transporter carbon starvation CstA ISU60_08990 PF04328 Selenoprotein, putative ISU60_08995 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU60_09005 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_09010 PF05433 Glycine zipper 2TM domain ISU60_09015 PF01253 Translation initiation factor SUI1 ISU60_09020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU60_09030 PF18073 Rubredoxin metal binding domain ISU60_09035 PF06305 Lipopolysaccharide assembly protein A domain ISU60_09040 PF01569 PAP2 superfamily ISU60_09045 PF00925 GTP cyclohydrolase II ISU60_09050 PF00694 Aconitase C-terminal domain ISU60_09050 PF00330 Aconitase family (aconitate hydratase) ISU60_09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_09060 PF03466 LysR substrate binding domain ISU60_09065 PF01396 Topoisomerase DNA binding C4 zinc finger ISU60_09065 PF08272 Topoisomerase I zinc-ribbon-like ISU60_09065 PF01131 DNA topoisomerase ISU60_09065 PF01751 Toprim domain ISU60_09075 PF10692 Protein of unknown function (DUF2498) ISU60_09080 PF01343 Peptidase family S49 ISU60_09080 PF08496 Peptidase family S49 N-terminal ISU60_09085 PF00106 short chain dehydrogenase ISU60_09090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU60_09095 PF01479 S4 domain ISU60_09095 PF00849 RNA pseudouridylate synthase ISU60_09100 PF01300 Telomere recombination ISU60_09105 PF02811 PHP domain ISU60_09115 PF04715 Anthranilate synthase component I, N terminal region ISU60_09115 PF00425 chorismate binding enzyme ISU60_09120 PF00117 Glutamine amidotransferase class-I ISU60_09125 PF00591 Glycosyl transferase family, a/b domain ISU60_09125 PF02885 Glycosyl transferase family, helical bundle domain ISU60_09130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU60_09130 PF00218 Indole-3-glycerol phosphate synthase ISU60_09135 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_09140 PF00290 Tryptophan synthase alpha chain ISU60_09150 PF03922 OmpW family ISU60_09175 PF04279 Intracellular septation protein A ISU60_09180 PF03061 Thioesterase superfamily ISU60_09185 PF00872 Transposase, Mutator family ISU60_09190 PF03544 Gram-negative bacterial TonB protein C-terminal ISU60_09195 PF03795 YCII-related domain ISU60_09210 PF13505 Outer membrane protein beta-barrel domain ISU60_09225 PF13396 Phospholipase_D-nuclease N-terminal ISU60_09225 PF13091 PLD-like domain ISU60_09230 PF04269 Protein of unknown function, DUF440 ISU60_09240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_09240 PF00005 ABC transporter ISU60_09245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_09245 PF00005 ABC transporter ISU60_09250 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_09250 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_09255 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_09260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_09265 PF01914 MarC family integral membrane protein ISU60_09270 PF00465 Iron-containing alcohol dehydrogenase ISU60_09270 PF00171 Aldehyde dehydrogenase family ISU60_09275 PF02796 Helix-turn-helix domain of resolvase ISU60_09275 PF00665 Integrase core domain ISU60_09280 PF01695 IstB-like ATP binding protein ISU60_09285 PF00265 Thymidine kinase ISU60_09290 PF00816 H-NS histone family ISU60_09295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU60_09295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU60_09295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU60_09300 PF00072 Response regulator receiver domain ISU60_09305 PF02810 SEC-C motif ISU60_09310 PF00551 Formyl transferase ISU60_09310 PF01842 ACT domain ISU60_09315 PF00872 Transposase, Mutator family ISU60_09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_09320 PF03466 LysR substrate binding domain ISU60_09325 PF03372 Endonuclease/Exonuclease/phosphatase family ISU60_09330 PF00293 NUDIX domain ISU60_09335 PF07383 Protein of unknown function (DUF1496) ISU60_09340 PF01131 DNA topoisomerase ISU60_09340 PF01751 Toprim domain ISU60_09345 PF02769 AIR synthase related protein, C-terminal domain ISU60_09345 PF00586 AIR synthase related protein, N-terminal domain ISU60_09350 PF00881 Nitroreductase family ISU60_09355 PF01343 Peptidase family S49 ISU60_09360 PF00710 Asparaginase, N-terminal ISU60_09360 PF17763 Glutaminase/Asparaginase C-terminal domain ISU60_09365 PF00857 Isochorismatase family ISU60_09370 PF07023 Protein of unknown function (DUF1315) ISU60_09375 PF01641 SelR domain ISU60_09380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU60_09380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU60_09385 PF01263 Aldose 1-epimerase ISU60_09390 PF06629 MltA-interacting protein MipA ISU60_09395 PF08298 PrkA AAA domain ISU60_09395 PF06798 PrkA serine protein kinase C-terminal domain ISU60_09400 PF04285 Protein of unknown function (DUF444) ISU60_09410 PF03466 LysR substrate binding domain ISU60_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_09415 PF05726 Pirin C-terminal cupin domain ISU60_09415 PF02678 Pirin ISU60_09420 PF07690 Major Facilitator Superfamily ISU60_09425 PF01266 FAD dependent oxidoreductase ISU60_09430 PF04293 SpoVR like protein ISU60_09435 PF00392 Bacterial regulatory proteins, gntR family ISU60_09435 PF07840 FadR C-terminal domain ISU60_09440 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ISU60_09445 PF02600 Disulfide bond formation protein DsbB ISU60_09460 PF00266 Aminotransferase class-V ISU60_09470 PF00872 Transposase, Mutator family ISU60_09475 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU60_09630 PF00872 Transposase, Mutator family ISU60_09695 PF06530 Phage antitermination protein Q ISU60_09705 PF05772 NinB protein ISU60_09720 PF01695 IstB-like ATP binding protein ISU60_09725 PF02796 Helix-turn-helix domain of resolvase ISU60_09725 PF00665 Integrase core domain ISU60_09730 PF12167 Arm DNA-binding domain ISU60_09730 PF00589 Phage integrase family ISU60_09735 PF03692 Putative zinc- or iron-chelating domain ISU60_09740 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_09745 PF13406 Transglycosylase SLT domain ISU60_09750 PF05166 YcgL domain ISU60_09755 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU60_09755 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU60_09760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU60_09765 PF03776 Septum formation topological specificity factor MinE ISU60_09770 PF01612 3'-5' exonuclease ISU60_09770 PF00570 HRDC domain ISU60_09775 PF00501 AMP-binding enzyme ISU60_09775 PF13193 AMP-binding enzyme C-terminal domain ISU60_09785 PF03843 Outer membrane lipoprotein Slp family ISU60_09790 PF00814 Glycoprotease family ISU60_09795 PF04851 Type III restriction enzyme, res subunit ISU60_09795 PF13307 Helicase C-terminal domain ISU60_09800 PF01042 Endoribonuclease L-PSP ISU60_09805 PF00893 Small Multidrug Resistance protein ISU60_09810 PF00893 Small Multidrug Resistance protein ISU60_09815 PF01081 KDPG and KHG aldolase ISU60_09820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU60_09820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU60_09825 PF01418 Helix-turn-helix domain, rpiR family ISU60_09825 PF01380 SIS domain ISU60_09830 PF00224 Pyruvate kinase, barrel domain ISU60_09830 PF02887 Pyruvate kinase, alpha/beta domain ISU60_09840 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU60_09845 PF01551 Peptidase family M23 ISU60_09845 PF08525 Opacity-associated protein A N-terminal motif ISU60_09845 PF01476 LysM domain ISU60_09850 PF01297 Zinc-uptake complex component A periplasmic ISU60_09855 PF00005 ABC transporter ISU60_09860 PF00950 ABC 3 transport family ISU60_09865 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU60_09865 PF05491 RuvB C-terminal winged helix domain ISU60_09865 PF17864 RuvB AAA lid domain ISU60_09870 PF01330 RuvA N terminal domain ISU60_09870 PF07499 RuvA, C-terminal domain ISU60_09875 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU60_09880 PF01709 Transcriptional regulator ISU60_09885 PF00293 NUDIX domain ISU60_09890 PF01336 OB-fold nucleic acid binding domain ISU60_09890 PF02938 GAD domain ISU60_09890 PF00152 tRNA synthetases class II (D, K and N) ISU60_09895 PF01904 Protein of unknown function DUF72 ISU60_09900 PF01124 MAPEG family ISU60_09905 PF13649 Methyltransferase domain ISU60_09910 PF08003 Protein of unknown function (DUF1698) ISU60_09915 PF03932 CutC family ISU60_09920 PF06185 YecM protein ISU60_09925 PF03485 Arginyl tRNA synthetase N terminal domain ISU60_09925 PF05746 DALR anticodon binding domain ISU60_09925 PF00750 tRNA synthetases class I (R) ISU60_09930 PF05860 haemagglutination activity domain ISU60_09930 PF13332 Hemagglutinin repeat ISU60_09935 PF17287 POTRA domain ISU60_09935 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_09935 PF08479 POTRA domain, ShlB-type ISU60_09940 PF03023 Lipid II flippase MurJ ISU60_09945 PF04337 Protein of unknown function, DUF480 ISU60_09950 PF13302 Acetyltransferase (GNAT) domain ISU60_09960 PF07273 Protein of unknown function (DUF1439) ISU60_09965 PF02613 Nitrate reductase delta subunit ISU60_09970 PF02811 PHP domain ISU60_09980 PF00480 ROK family ISU60_09980 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU60_09985 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_10000 PF00005 ABC transporter ISU60_10000 PF08402 TOBE domain ISU60_10005 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_10010 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_10020 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_10030 PF00916 Sulfate permease family ISU60_10030 PF01740 STAS domain ISU60_10035 PF00793 DAHP synthetase I family ISU60_10040 PF13369 Transglutaminase-like superfamily ISU60_10045 PF04247 Invasion gene expression up-regulator, SirB ISU60_10050 PF13847 Methyltransferase domain ISU60_10050 PF17827 PrmC N-terminal domain ISU60_10055 PF03462 PCRF domain ISU60_10055 PF00472 RF-1 domain ISU60_10060 PF01488 Shikimate / quinate 5-dehydrogenase ISU60_10060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU60_10060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU60_10065 PF03550 Outer membrane lipoprotein LolB ISU60_10070 PF08544 GHMP kinases C terminal ISU60_10070 PF00288 GHMP kinases N terminal domain ISU60_10075 PF14572 Phosphoribosyl synthetase-associated domain ISU60_10075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU60_10080 PF10762 Protein of unknown function (DUF2583) ISU60_10085 PF01195 Peptidyl-tRNA hydrolase ISU60_10090 PF06071 Protein of unknown function (DUF933) ISU60_10090 PF01926 50S ribosome-binding GTPase ISU60_10130 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU60_10135 PF00486 Transcriptional regulatory protein, C terminal ISU60_10135 PF00072 Response regulator receiver domain ISU60_10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_10140 PF00512 His Kinase A (phospho-acceptor) domain ISU60_10140 PF00672 HAMP domain ISU60_10185 PF08242 Methyltransferase domain ISU60_10205 PF00872 Transposase, Mutator family ISU60_10250 PF01370 NAD dependent epimerase/dehydratase family ISU60_10255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU60_10255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU60_10260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU60_10260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU60_10270 PF05962 HutD ISU60_10275 PF01979 Amidohydrolase family ISU60_10280 PF00392 Bacterial regulatory proteins, gntR family ISU60_10280 PF07702 UTRA domain ISU60_10285 PF01979 Amidohydrolase family ISU60_10300 PF01695 IstB-like ATP binding protein ISU60_10305 PF00665 Integrase core domain ISU60_10305 PF02796 Helix-turn-helix domain of resolvase ISU60_10315 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU60_10320 PF04996 Succinylarginine dihydrolase ISU60_10325 PF00171 Aldehyde dehydrogenase family ISU60_10335 PF00202 Aminotransferase class-III ISU60_10340 PF00155 Aminotransferase class I and II ISU60_10340 PF00392 Bacterial regulatory proteins, gntR family ISU60_10350 PF00672 HAMP domain ISU60_10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_10350 PF07730 Histidine kinase ISU60_10350 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU60_10355 PF01699 Sodium/calcium exchanger protein ISU60_10360 PF02562 PhoH-like protein ISU60_10375 PF13994 PgaD-like protein ISU60_10380 PF00535 Glycosyl transferase family 2 ISU60_10385 PF01522 Polysaccharide deacetylase ISU60_10385 PF14883 Hypothetical glycosyl hydrolase family 13 ISU60_10395 PF00557 Metallopeptidase family M24 ISU60_10400 PF03848 Tellurite resistance protein TehB ISU60_10400 PF09313 Domain of unknown function (DUF1971) ISU60_10410 PF00578 AhpC/TSA family ISU60_10415 PF02687 FtsX-like permease family ISU60_10415 PF00005 ABC transporter ISU60_10415 PF12704 MacB-like periplasmic core domain ISU60_10425 PF00005 ABC transporter ISU60_10425 PF12704 MacB-like periplasmic core domain ISU60_10425 PF02687 FtsX-like permease family ISU60_10435 PF10634 Fe2+ transport protein ISU60_10440 PF03239 Iron permease FTR1 family ISU60_10455 PF04960 Glutaminase ISU60_10465 PF00455 DeoR C terminal sensor domain ISU60_10465 PF08220 DeoR-like helix-turn-helix domain ISU60_10470 PF00324 Amino acid permease ISU60_10475 PF00155 Aminotransferase class I and II ISU60_10480 PF02508 Rnf-Nqr subunit, membrane protein ISU60_10490 PF04909 Amidohydrolase ISU60_10495 PF07690 Major Facilitator Superfamily ISU60_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_10510 PF03466 LysR substrate binding domain ISU60_10515 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU60_10520 PF01575 MaoC like domain ISU60_10525 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISU60_10525 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISU60_10530 PF00196 Bacterial regulatory proteins, luxR family ISU60_10530 PF00072 Response regulator receiver domain ISU60_10535 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_10535 PF00072 Response regulator receiver domain ISU60_10535 PF00989 PAS fold ISU60_10535 PF00512 His Kinase A (phospho-acceptor) domain ISU60_10535 PF01627 Hpt domain ISU60_10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_10545 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_10545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_10550 PF13954 PapC N-terminal domain ISU60_10550 PF13953 PapC C-terminal domain ISU60_10550 PF00577 Outer membrane usher protein ISU60_10560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_10560 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_10570 PF13356 Arm DNA-binding domain ISU60_10570 PF00589 Phage integrase family ISU60_10575 PF00425 chorismate binding enzyme ISU60_10580 PF07690 Major Facilitator Superfamily ISU60_10585 PF00664 ABC transporter transmembrane region ISU60_10585 PF00005 ABC transporter ISU60_10590 PF08021 Siderophore-interacting FAD-binding domain ISU60_10590 PF00005 ABC transporter ISU60_10590 PF04954 Siderophore-interacting protein ISU60_10590 PF00664 ABC transporter transmembrane region ISU60_10600 PF00501 AMP-binding enzyme ISU60_10600 PF00550 Phosphopantetheine attachment site ISU60_10600 PF00668 Condensation domain ISU60_10600 PF08242 Methyltransferase domain ISU60_10605 PF16197 Ketoacyl-synthetase C-terminal extension ISU60_10605 PF00698 Acyl transferase domain ISU60_10605 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_10605 PF00668 Condensation domain ISU60_10605 PF00550 Phosphopantetheine attachment site ISU60_10605 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_10615 PF00975 Thioesterase domain ISU60_10620 PF00501 AMP-binding enzyme ISU60_10620 PF13193 AMP-binding enzyme C-terminal domain ISU60_10625 PF07715 TonB-dependent Receptor Plug Domain ISU60_10625 PF00593 TonB dependent receptor ISU60_10660 PF01695 IstB-like ATP binding protein ISU60_10665 PF02796 Helix-turn-helix domain of resolvase ISU60_10665 PF00665 Integrase core domain ISU60_10685 PF08402 TOBE domain ISU60_10685 PF00005 ABC transporter ISU60_10690 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_10695 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_10705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_10705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_10710 PF07702 UTRA domain ISU60_10710 PF00392 Bacterial regulatory proteins, gntR family ISU60_10780 PF05638 Type VI secretion system effector, Hcp ISU60_10825 PF01066 CDP-alcohol phosphatidyltransferase ISU60_10830 PF01541 GIY-YIG catalytic domain ISU60_10830 PF08459 UvrC Helix-hairpin-helix N-terminal ISU60_10830 PF02151 UvrB/uvrC motif ISU60_10835 PF00072 Response regulator receiver domain ISU60_10835 PF00196 Bacterial regulatory proteins, luxR family ISU60_10840 PF10769 Protein of unknown function (DUF2594) ISU60_10845 PF06942 GlpM protein ISU60_10855 PF13505 Outer membrane protein beta-barrel domain ISU60_10865 PF00324 Amino acid permease ISU60_10870 PF01344 Kelch motif ISU60_10875 PF03358 NADPH-dependent FMN reductase ISU60_10880 PF04261 Dyp-type peroxidase family ISU60_10885 PF09375 Imelysin ISU60_10885 PF13473 Cupredoxin-like domain ISU60_10890 PF03239 Iron permease FTR1 family ISU60_10895 PF00474 Sodium:solute symporter family ISU60_10905 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU60_10905 PF14850 DNA-binding domain of Proline dehydrogenase ISU60_10905 PF01619 Proline dehydrogenase ISU60_10905 PF00171 Aldehyde dehydrogenase family ISU60_10920 PF00005 ABC transporter ISU60_10925 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_10930 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_10935 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_10940 PF02899 Phage integrase, N-terminal SAM-like domain ISU60_10945 PF04539 Sigma-70 region 3 ISU60_10945 PF04542 Sigma-70 region 2 ISU60_10945 PF04545 Sigma-70, region 4 ISU60_10950 PF00700 Bacterial flagellin C-terminal helical region ISU60_10950 PF08884 Flagellin D3 domain ISU60_10950 PF00669 Bacterial flagellin N-terminal helical region ISU60_10955 PF07195 Flagellar hook-associated protein 2 C-terminus ISU60_10955 PF07196 Flagellin hook IN motif ISU60_10955 PF02465 Flagellar hook-associated protein 2 N-terminus ISU60_10960 PF02561 Flagellar protein FliS ISU60_10965 PF05400 Flagellar protein FliT ISU60_10970 PF12833 Helix-turn-helix domain ISU60_10975 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU60_10975 PF02743 Cache domain ISU60_10975 PF00672 HAMP domain ISU60_10980 PF01966 HD domain ISU60_10985 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU60_11005 PF02049 Flagellar hook-basal body complex protein FliE ISU60_11010 PF08345 Flagellar M-ring protein C-terminal ISU60_11010 PF01514 Secretory protein of YscJ/FliF family ISU60_11015 PF01706 FliG C-terminal domain ISU60_11015 PF14841 FliG middle domain ISU60_11015 PF14842 FliG N-terminal domain ISU60_11020 PF02108 Flagellar assembly protein FliH ISU60_11025 PF18269 T3SS EscN ATPase C-terminal domain ISU60_11025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_11030 PF02050 Flagellar FliJ protein ISU60_11035 PF02120 Flagellar hook-length control protein FliK ISU60_11040 PF03748 Flagellar basal body-associated protein FliL ISU60_11045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_11045 PF02154 Flagellar motor switch protein FliM ISU60_11050 PF16973 Flagellar motor switch protein FliN N-terminal ISU60_11050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_11055 PF04347 Flagellar biosynthesis protein, FliO ISU60_11060 PF00813 FliP family ISU60_11065 PF01313 Bacterial export proteins, family 3 ISU60_11070 PF01311 Bacterial export proteins, family 1 ISU60_11085 PF00294 pfkB family carbohydrate kinase ISU60_11090 PF02653 Branched-chain amino acid transport system / permease component ISU60_11095 PF00005 ABC transporter ISU60_11100 PF13407 Periplasmic binding protein domain ISU60_11105 PF02653 Branched-chain amino acid transport system / permease component ISU60_11110 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_11115 PF04198 Putative sugar-binding domain ISU60_11120 PF00669 Bacterial flagellin N-terminal helical region ISU60_11125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_11125 PF00460 Flagella basal body rod protein ISU60_11130 PF10135 Rod binding protein ISU60_11130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU60_11135 PF02119 Flagellar P-ring protein ISU60_11140 PF02107 Flagellar L-ring protein ISU60_11155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_11155 PF00460 Flagella basal body rod protein ISU60_11155 PF07559 Flagellar basal body protein FlaE ISU60_11160 PF03963 Flagellar hook capping protein - N-terminal region ISU60_11160 PF13860 FlgD Ig-like domain ISU60_11160 PF13861 FlgD Tudor-like domain ISU60_11165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_11165 PF00460 Flagella basal body rod protein ISU60_11170 PF00460 Flagella basal body rod protein ISU60_11175 PF13144 Chaperone for flagella basal body P-ring formation ISU60_11175 PF17656 FlgA N-terminal domain ISU60_11180 PF04316 Anti-sigma-28 factor, FlgM ISU60_11185 PF05130 FlgN protein ISU60_11205 PF06366 Flagellar protein FlhE ISU60_11210 PF00771 FHIPEP family ISU60_11215 PF01312 FlhB HrpN YscU SpaS Family ISU60_11230 PF10709 Protein of unknown function (DUF2511) ISU60_11240 PF04234 CopC domain ISU60_11245 PF00210 Ferritin-like domain ISU60_11250 PF06440 DNA polymerase III, theta subunit ISU60_11255 PF00561 alpha/beta hydrolase fold ISU60_11260 PF00326 Prolyl oligopeptidase family ISU60_11260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU60_11265 PF13995 YebF-like protein ISU60_11270 PF04266 ASCH domain ISU60_11275 PF07130 YebG protein ISU60_11280 PF03880 DbpA RNA binding domain ISU60_11280 PF00271 Helicase conserved C-terminal domain ISU60_11280 PF00270 DEAD/DEAH box helicase ISU60_11285 PF02222 ATP-grasp domain ISU60_11290 PF03701 Uncharacterised protein family (UPF0181) ISU60_11295 PF00425 chorismate binding enzyme ISU60_11295 PF04715 Anthranilate synthase component I, N terminal region ISU60_11300 PF00293 NUDIX domain ISU60_11305 PF03313 Serine dehydratase alpha chain ISU60_11305 PF03315 Serine dehydratase beta chain ISU60_11310 PF01613 Flavin reductase like domain ISU60_11315 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU60_11315 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU60_11320 PF07690 Major Facilitator Superfamily ISU60_11325 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU60_11330 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_11335 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU60_11340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU60_11345 PF00171 Aldehyde dehydrogenase family ISU60_11350 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_11355 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_11360 PF01047 MarR family ISU60_11365 PF03471 Transporter associated domain ISU60_11365 PF03741 Integral membrane protein TerC family ISU60_11370 PF03830 PTS system sorbose subfamily IIB component ISU60_11370 PF03610 PTS system fructose IIA component ISU60_11375 PF03609 PTS system sorbose-specific iic component ISU60_11380 PF03613 PTS system mannose/fructose/sorbose family IID component ISU60_11385 PF06173 Protein of unknown function (DUF986) ISU60_11390 PF02659 Putative manganese efflux pump ISU60_11395 PF00593 TonB dependent receptor ISU60_11395 PF07715 TonB-dependent Receptor Plug Domain ISU60_11400 PF00990 Diguanylate cyclase, GGDEF domain ISU60_11400 PF05231 MASE1 ISU60_11400 PF08447 PAS fold ISU60_11400 PF08448 PAS fold ISU60_11400 PF13426 PAS domain ISU60_11400 PF00563 EAL domain ISU60_11410 PF13847 Methyltransferase domain ISU60_11415 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU60_11420 PF00313 'Cold-shock' DNA-binding domain ISU60_11425 PF10736 Protein of unknown function (DUF2627) ISU60_11430 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU60_11435 PF00324 Amino acid permease ISU60_11450 PF13974 YebO-like protein ISU60_11455 PF13998 MgrB protein ISU60_11460 PF13996 YobH-like protein ISU60_11465 PF10964 Protein of unknown function (DUF2766) ISU60_11470 PF12833 Helix-turn-helix domain ISU60_11480 PF00005 ABC transporter ISU60_11480 PF00664 ABC transporter transmembrane region ISU60_11495 PF06167 Glucose-regulated metallo-peptidase M90 ISU60_11505 PF00356 Bacterial regulatory proteins, lacI family ISU60_11505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_11510 PF01695 IstB-like ATP binding protein ISU60_11515 PF02796 Helix-turn-helix domain of resolvase ISU60_11515 PF00665 Integrase core domain ISU60_11525 PF00872 Transposase, Mutator family ISU60_11530 PF01306 LacY proton/sugar symporter ISU60_11535 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU60_11535 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU60_11545 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU60_11545 PF01648 4'-phosphopantetheinyl transferase superfamily ISU60_11550 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU60_11560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU60_11565 PF00072 Response regulator receiver domain ISU60_11565 PF00196 Bacterial regulatory proteins, luxR family ISU60_11575 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU60_11585 PF01522 Polysaccharide deacetylase ISU60_11595 PF01554 MatE ISU60_11600 PF00764 Arginosuccinate synthase ISU60_11605 PF01070 FMN-dependent dehydrogenase ISU60_11610 PF13378 Enolase C-terminal domain-like ISU60_11610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU60_11615 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_11625 PF04134 Protein of unknown function, DUF393 ISU60_11630 PF07690 Major Facilitator Superfamily ISU60_11640 PF11924 Inverse autotransporter, beta-domain ISU60_11640 PF02369 Bacterial Ig-like domain (group 1) ISU60_11640 PF09134 Invasin, domain 3 ISU60_11645 PF00872 Transposase, Mutator family ISU60_11650 PF04363 Protein of unknown function (DUF496) ISU60_11660 PF00929 Exonuclease ISU60_11660 PF08411 Exonuclease C-terminal ISU60_11670 PF13520 Amino acid permease ISU60_11675 PF00465 Iron-containing alcohol dehydrogenase ISU60_11680 PF00005 ABC transporter ISU60_11685 PF00005 ABC transporter ISU60_11690 PF02653 Branched-chain amino acid transport system / permease component ISU60_11705 PF01370 NAD dependent epimerase/dehydratase family ISU60_11715 PF08029 HisG, C-terminal domain ISU60_11715 PF01634 ATP phosphoribosyltransferase ISU60_11720 PF00815 Histidinol dehydrogenase ISU60_11725 PF00155 Aminotransferase class I and II ISU60_11730 PF00475 Imidazoleglycerol-phosphate dehydratase ISU60_11735 PF00117 Glutamine amidotransferase class-I ISU60_11740 PF00977 Histidine biosynthesis protein ISU60_11745 PF00977 Histidine biosynthesis protein ISU60_11750 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU60_11750 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU60_11755 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU60_11755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU60_11760 PF00483 Nucleotidyl transferase ISU60_11765 PF00483 Nucleotidyl transferase ISU60_11770 PF06276 Ferric iron reductase FhuF-like transporter ISU60_11770 PF04183 IucA / IucC family ISU60_11775 PF07715 TonB-dependent Receptor Plug Domain ISU60_11775 PF00593 TonB dependent receptor ISU60_11775 PF07660 Secretin and TonB N terminus short domain ISU60_11780 PF01497 Periplasmic binding protein ISU60_11785 PF01032 FecCD transport family ISU60_11790 PF01032 FecCD transport family ISU60_11795 PF00005 ABC transporter ISU60_11800 PF06276 Ferric iron reductase FhuF-like transporter ISU60_11800 PF04183 IucA / IucC family ISU60_11810 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU60_11815 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU60_11820 PF11575 FhuF 2Fe-2S C-terminal domain ISU60_11820 PF06276 Ferric iron reductase FhuF-like transporter ISU60_11825 PF00571 CBS domain ISU60_11825 PF03471 Transporter associated domain ISU60_11825 PF03741 Integral membrane protein TerC family ISU60_11830 PF05170 AsmA family ISU60_11835 PF00692 dUTPase ISU60_11840 PF00485 Phosphoribulokinase / Uridine kinase family ISU60_11845 PF10609 NUBPL iron-transfer P-loop NTPase ISU60_11850 PF09334 tRNA synthetases class I (M) ISU60_11850 PF01588 Putative tRNA binding domain ISU60_11855 PF01797 Transposase IS200 like ISU60_11875 PF07690 Major Facilitator Superfamily ISU60_11880 PF03788 LrgA family ISU60_11885 PF04172 LrgB-like family ISU60_11890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU60_11890 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU60_11895 PF00390 Malic enzyme, N-terminal domain ISU60_11895 PF03949 Malic enzyme, NAD binding domain ISU60_11900 PF02698 DUF218 domain ISU60_11905 PF02653 Branched-chain amino acid transport system / permease component ISU60_11910 PF00005 ABC transporter ISU60_11915 PF13407 Periplasmic binding protein domain ISU60_11920 PF04235 Protein of unknown function (DUF418) ISU60_11925 PF01227 GTP cyclohydrolase I ISU60_11930 PF06779 Uncharacterised MFS-type transporter YbfB ISU60_11935 PF03466 LysR substrate binding domain ISU60_11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_11940 PF00107 Zinc-binding dehydrogenase ISU60_11940 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_11945 PF00756 Putative esterase ISU60_11960 PF13533 Biotin-lipoyl like ISU60_11965 PF00005 ABC transporter ISU60_11975 PF00994 Probable molybdopterin binding domain ISU60_11975 PF03454 MoeA C-terminal region (domain IV) ISU60_11975 PF03453 MoeA N-terminal region (domain I and II) ISU60_11980 PF00899 ThiF family ISU60_11985 PF00872 Transposase, Mutator family ISU60_11995 PF00005 ABC transporter ISU60_11995 PF12848 ABC transporter ISU60_12085 PF04717 Type VI secretion system, phage-baseplate injector ISU60_12085 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU60_12085 PF13296 Putative type VI secretion system Rhs element Vgr ISU60_12090 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_12090 PF07724 AAA domain (Cdc48 subfamily) ISU60_12090 PF17871 AAA lid domain ISU60_12090 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_12100 PF05736 OprF membrane domain ISU60_12100 PF00691 OmpA family ISU60_12115 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_12125 PF00698 Acyl transferase domain ISU60_12130 PF00550 Phosphopantetheine attachment site ISU60_12145 PF00378 Enoyl-CoA hydratase/isomerase ISU60_12155 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU60_12155 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU60_12165 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_12165 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_12170 PF07977 FabA-like domain ISU60_12185 PF01565 FAD binding domain ISU60_12185 PF08031 Berberine and berberine like ISU60_12205 PF04358 DsrC like protein ISU60_12210 PF00708 Acylphosphatase ISU60_12215 PF10672 S-adenosylmethionine-dependent methyltransferase ISU60_12215 PF17785 PUA-like domain ISU60_12220 PF08755 Hemimethylated DNA-binding protein YccV like ISU60_12225 PF13380 CoA binding domain ISU60_12230 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU60_12235 PF02142 MGS-like domain ISU60_12240 PF13361 UvrD-like helicase C-terminal domain ISU60_12240 PF00580 UvrD/REP helicase N-terminal domain ISU60_12240 PF12462 DNA helicase IV / RNA helicase N terminal ISU60_12245 PF03733 Inner membrane component domain ISU60_12250 PF12805 FUSC-like inner membrane protein yccS ISU60_12255 PF04994 TfoX C-terminal domain ISU60_12255 PF04993 TfoX N-terminal domain ISU60_12260 PF03846 Cell division inhibitor SulA ISU60_12265 PF00691 OmpA family ISU60_12265 PF01389 OmpA-like transmembrane domain ISU60_12270 PF01797 Transposase IS200 like ISU60_12275 PF06303 MatP N-terminal domain ISU60_12275 PF17414 MatP C-terminal ribbon-helix-helix domain ISU60_12280 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU60_12280 PF13654 AAA domain ISU60_12285 PF07977 FabA-like domain ISU60_12300 PF00665 Integrase core domain ISU60_12300 PF02796 Helix-turn-helix domain of resolvase ISU60_12305 PF01695 IstB-like ATP binding protein ISU60_12315 PF01797 Transposase IS200 like ISU60_12320 PF04957 Ribosome modulation factor ISU60_12325 PF03886 ABC-type transport auxiliary lipoprotein component ISU60_12335 PF02470 MlaD protein ISU60_12340 PF04403 Paraquat-inducible protein A ISU60_12345 PF16326 ABC transporter C-terminal domain ISU60_12345 PF12848 ABC transporter ISU60_12345 PF00005 ABC transporter ISU60_12350 PF10672 S-adenosylmethionine-dependent methyltransferase ISU60_12350 PF02926 THUMP domain ISU60_12350 PF01170 Putative RNA methylase family UPF0020 ISU60_12355 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_12355 PF03473 MOSC domain ISU60_12355 PF03476 MOSC N-terminal beta barrel domain ISU60_12360 PF07126 Cell-division protein ZapC ISU60_12365 PF01180 Dihydroorotate dehydrogenase ISU60_12370 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU60_12370 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU60_12370 PF01433 Peptidase family M1 domain ISU60_12375 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU60_12375 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU60_12380 PF00152 tRNA synthetases class II (D, K and N) ISU60_12380 PF01336 OB-fold nucleic acid binding domain ISU60_12385 PF00267 Gram-negative porin ISU60_12390 PF00155 Aminotransferase class I and II ISU60_12400 PF00753 Metallo-beta-lactamase superfamily ISU60_12405 PF05951 Bacterial protein of unknown function (DUF882) ISU60_12410 PF03734 L,D-transpeptidase catalytic domain ISU60_12410 PF01471 Putative peptidoglycan binding domain ISU60_12420 PF16330 MukB hinge domain ISU60_12420 PF04310 MukB N-terminal ISU60_12425 PF04288 MukE-like family ISU60_12430 PF17192 MukF middle domain ISU60_12430 PF03882 MukF winged-helix domain ISU60_12430 PF17193 MukF C-terminal domain ISU60_12435 PF13847 Methyltransferase domain ISU60_12440 PF01636 Phosphotransferase enzyme family ISU60_12445 PF02348 Cytidylyltransferase ISU60_12450 PF03966 Trm112p-like protein ISU60_12455 PF00313 'Cold-shock' DNA-binding domain ISU60_12460 PF07063 Domain of unknown function (DUF1338) ISU60_12465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU60_12470 PF00664 ABC transporter transmembrane region ISU60_12470 PF00005 ABC transporter ISU60_12475 PF00753 Metallo-beta-lactamase superfamily ISU60_12475 PF03772 Competence protein ISU60_12480 PF00216 Bacterial DNA-binding protein ISU60_12485 PF00575 S1 RNA binding domain ISU60_12490 PF02224 Cytidylate kinase ISU60_12500 PF00266 Aminotransferase class-V ISU60_12510 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_12510 PF05658 Head domain of trimeric autotransporter adhesin ISU60_12510 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_12510 PF05658 Head domain of trimeric autotransporter adhesin ISU60_12510 PF03895 YadA-like membrane anchor domain ISU60_12510 PF13018 Extended Signal Peptide of Type V secretion system ISU60_12510 PF03895 YadA-like membrane anchor domain ISU60_12510 PF13018 Extended Signal Peptide of Type V secretion system ISU60_12515 PF00710 Asparaginase, N-terminal ISU60_12515 PF17763 Glutaminase/Asparaginase C-terminal domain ISU60_12520 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU60_12520 PF18381 YcaO cyclodehydratase C-terminal domain ISU60_12525 PF01226 Formate/nitrite transporter ISU60_12530 PF02901 Pyruvate formate lyase-like ISU60_12530 PF01228 Glycine radical ISU60_12540 PF04055 Radical SAM superfamily ISU60_12545 PF07690 Major Facilitator Superfamily ISU60_12550 PF02403 Seryl-tRNA synthetase N-terminal domain ISU60_12550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU60_12555 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_12555 PF12002 MgsA AAA+ ATPase C terminal ISU60_12555 PF16193 AAA C-terminal domain ISU60_12560 PF03548 Outer membrane lipoprotein carrier protein LolA ISU60_12565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU60_12565 PF09397 Ftsk gamma domain ISU60_12565 PF01580 FtsK/SpoIIIE family ISU60_12565 PF17854 FtsK alpha domain ISU60_12570 PF01037 Lrp/AsnC ligand binding domain ISU60_12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_12580 PF00005 ABC transporter ISU60_12580 PF00664 ABC transporter transmembrane region ISU60_12585 PF00664 ABC transporter transmembrane region ISU60_12585 PF00005 ABC transporter ISU60_12590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU60_12595 PF01176 Translation initiation factor 1A / IF-1 ISU60_12605 PF17871 AAA lid domain ISU60_12605 PF07724 AAA domain (Cdc48 subfamily) ISU60_12605 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_12605 PF02861 Clp amino terminal domain, pathogenicity island component ISU60_12605 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_12610 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU60_12615 PF00313 'Cold-shock' DNA-binding domain ISU60_12620 PF12704 MacB-like periplasmic core domain ISU60_12620 PF02687 FtsX-like permease family ISU60_12620 PF00005 ABC transporter ISU60_12625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_12630 PF04393 Protein of unknown function (DUF535) ISU60_12635 PF11398 Protein of unknown function (DUF2813) ISU60_12640 PF03956 Lysine exporter LysO ISU60_12645 PF03063 Prismane/CO dehydrogenase family ISU60_12650 PF00175 Oxidoreductase NAD-binding domain ISU60_12650 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_12650 PF00970 Oxidoreductase FAD-binding domain ISU60_12655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_12655 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_12655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_12665 PF01212 Beta-eliminating lyase ISU60_12670 PF11066 Protein of unknown function (DUF2867) ISU60_12670 PF13460 NAD(P)H-binding ISU60_12675 PF01370 NAD dependent epimerase/dehydratase family ISU60_12680 PF12883 Protein of unknown function (DUF3828) ISU60_12685 PF01817 Chorismate mutase type II ISU60_12690 PF00005 ABC transporter ISU60_12695 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_12700 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_12705 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_12715 PF00892 EamA-like transporter family ISU60_12720 PF10100 Staphylopine dehydrogenase ISU60_12725 PF03059 Nicotianamine synthase protein ISU60_12730 PF00005 ABC transporter ISU60_12735 PF01032 FecCD transport family ISU60_12740 PF01032 FecCD transport family ISU60_12765 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_12770 PF05958 tRNA (Uracil-5-)-methyltransferase ISU60_12775 PF10767 Protein of unknown function (DUF2593) ISU60_12780 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_12785 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_12790 PF00005 ABC transporter ISU60_12790 PF08402 TOBE domain ISU60_12795 PF13416 Bacterial extracellular solute-binding protein ISU60_12800 PF10722 Putative bacterial sensory transduction regulator ISU60_12805 PF07214 Protein of unknown function (DUF1418) ISU60_12810 PF00462 Glutaredoxin ISU60_12815 PF06826 Predicted Permease Membrane Region ISU60_12815 PF02080 TrkA-C domain ISU60_12825 PF01569 PAP2 superfamily ISU60_12830 PF01791 DeoC/LacD family aldolase ISU60_12835 PF08220 DeoR-like helix-turn-helix domain ISU60_12835 PF00455 DeoR C terminal sensor domain ISU60_12845 PF07943 Penicillin-binding protein 5, C-terminal domain ISU60_12845 PF00768 D-alanyl-D-alanine carboxypeptidase ISU60_12850 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_12855 PF09383 NIL domain ISU60_12855 PF00005 ABC transporter ISU60_12860 PF03180 NLPA lipoprotein ISU60_12875 PF13417 Glutathione S-transferase, N-terminal domain ISU60_12875 PF00043 Glutathione S-transferase, C-terminal domain ISU60_12880 PF00593 TonB dependent receptor ISU60_12880 PF07715 TonB-dependent Receptor Plug Domain ISU60_12885 PF00005 ABC transporter ISU60_12900 PF00324 Amino acid permease ISU60_12905 PF03466 LysR substrate binding domain ISU60_12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_12910 PF03601 Conserved hypothetical protein 698 ISU60_12915 PF01261 Xylose isomerase-like TIM barrel ISU60_12920 PF00577 Outer membrane usher protein ISU60_12920 PF13954 PapC N-terminal domain ISU60_12920 PF13953 PapC C-terminal domain ISU60_12925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_12925 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_12935 PF17550 Family of unknown function ISU60_12940 PF00486 Transcriptional regulatory protein, C terminal ISU60_12945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_12945 PF02378 Phosphotransferase system, EIIC ISU60_12950 PF00294 pfkB family carbohydrate kinase ISU60_12955 PF00381 PTS HPr component phosphorylation site ISU60_12955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_12960 PF00293 NUDIX domain ISU60_12965 PF02653 Branched-chain amino acid transport system / permease component ISU60_12970 PF00005 ABC transporter ISU60_12980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU60_12985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_12985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_12990 PF00171 Aldehyde dehydrogenase family ISU60_13000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_13000 PF01842 ACT domain ISU60_13000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_13015 PF03692 Putative zinc- or iron-chelating domain ISU60_13020 PF03222 Tryptophan/tyrosine permease family ISU60_13025 PF08207 Elongation factor P (EF-P) KOW-like domain ISU60_13025 PF01132 Elongation factor P (EF-P) OB domain ISU60_13025 PF09285 Elongation factor P, C-terminal ISU60_13030 PF03786 D-mannonate dehydratase (UxuA) ISU60_13035 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_13035 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_13040 PF07729 FCD domain ISU60_13040 PF00392 Bacterial regulatory proteins, gntR family ISU60_13045 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU60_13045 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU60_13050 PF01569 PAP2 superfamily ISU60_13055 PF00877 NlpC/P60 family ISU60_13060 PF12792 CSS motif domain associated with EAL ISU60_13060 PF00563 EAL domain ISU60_13065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_13070 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_13075 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_13075 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_13080 PF00005 ABC transporter ISU60_13080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_13085 PF13989 YejG-like protein ISU60_13090 PF07690 Major Facilitator Superfamily ISU60_13095 PF00849 RNA pseudouridylate synthase ISU60_13095 PF01479 S4 domain ISU60_13100 PF00271 Helicase conserved C-terminal domain ISU60_13100 PF04851 Type III restriction enzyme, res subunit ISU60_13105 PF01386 Ribosomal L25p family ISU60_13110 PF01797 Transposase IS200 like ISU60_13115 PF04245 37-kD nucleoid-associated bacterial protein ISU60_13120 PF07208 Protein of unknown function (DUF1414) ISU60_13125 PF11893 Domain of unknown function (DUF3413) ISU60_13125 PF00884 Sulfatase ISU60_13140 PF05638 Type VI secretion system effector, Hcp ISU60_13160 PF00232 Glycosyl hydrolase family 1 ISU60_13165 PF01380 SIS domain ISU60_13165 PF01418 Helix-turn-helix domain, rpiR family ISU60_13170 PF07484 Phage Tail Collar Domain ISU60_13185 PF04865 Baseplate J-like protein ISU60_13225 PF04984 Phage tail sheath protein subtilisin-like domain ISU60_13225 PF17482 Phage tail sheath C-terminal domain ISU60_13245 PF01261 Xylose isomerase-like TIM barrel ISU60_13250 PF00455 DeoR C terminal sensor domain ISU60_13250 PF08220 DeoR-like helix-turn-helix domain ISU60_13260 PF17042 Nucleotide-binding C-terminal domain ISU60_13260 PF07005 Sugar-binding N-terminal domain ISU60_13265 PF06530 Phage antitermination protein Q ISU60_13270 PF01381 Helix-turn-helix ISU60_13270 PF00717 Peptidase S24-like ISU60_13275 PF06183 DinI-like family ISU60_13280 PF01278 Omptin family ISU60_13285 PF00672 HAMP domain ISU60_13285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_13285 PF02743 Cache domain ISU60_13290 PF12706 Beta-lactamase superfamily domain ISU60_13300 PF00144 Beta-lactamase ISU60_13320 PF00267 Gram-negative porin ISU60_13325 PF07690 Major Facilitator Superfamily ISU60_13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_13330 PF01627 Hpt domain ISU60_13330 PF16359 RcsD-ABL domain ISU60_13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_13335 PF16359 RcsD-ABL domain ISU60_13335 PF01627 Hpt domain ISU60_13340 PF00072 Response regulator receiver domain ISU60_13340 PF00196 Bacterial regulatory proteins, luxR family ISU60_13345 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU60_13345 PF00512 His Kinase A (phospho-acceptor) domain ISU60_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_13345 PF00072 Response regulator receiver domain ISU60_13350 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU60_13350 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU60_13360 PF00317 Ribonucleotide reductase, all-alpha domain ISU60_13360 PF02867 Ribonucleotide reductase, barrel domain ISU60_13360 PF03477 ATP cone domain ISU60_13365 PF00268 Ribonucleotide reductase, small chain ISU60_13370 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_13375 PF03974 Ecotin ISU60_13380 PF00994 Probable molybdopterin binding domain ISU60_13385 PF03222 Tryptophan/tyrosine permease family ISU60_13390 PF07437 YfaZ precursor ISU60_13395 PF00199 Catalase ISU60_13395 PF06628 Catalase-related immune-responsive ISU60_13400 PF06733 DEAD_2 ISU60_13400 PF13307 Helicase C-terminal domain ISU60_13405 PF00267 Gram-negative porin ISU60_13410 PF00892 EamA-like transporter family ISU60_13420 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU60_13420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU60_13420 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU60_13425 PF13520 Amino acid permease ISU60_13430 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_13435 PF00005 ABC transporter ISU60_13440 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_13450 PF00581 Rhodanese-like domain ISU60_13465 PF00005 ABC transporter ISU60_13470 PF00005 ABC transporter ISU60_13475 PF02653 Branched-chain amino acid transport system / permease component ISU60_13480 PF02653 Branched-chain amino acid transport system / permease component ISU60_13485 PF02954 Bacterial regulatory protein, Fis family ISU60_13485 PF13188 PAS domain ISU60_13485 PF00158 Sigma-54 interaction domain ISU60_13490 PF07308 Protein of unknown function (DUF1456) ISU60_13495 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_13500 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_13510 PF00005 ABC transporter ISU60_13515 PF04226 Transglycosylase associated protein ISU60_13525 PF01844 HNH endonuclease ISU60_13530 PF01928 CYTH domain ISU60_13535 PF01565 FAD binding domain ISU60_13535 PF09330 D-lactate dehydrogenase, membrane binding ISU60_13540 PF00768 D-alanyl-D-alanine carboxypeptidase ISU60_13550 PF01207 Dihydrouridine synthase (Dus) ISU60_13575 PF00872 Transposase, Mutator family ISU60_13610 PF00271 Helicase conserved C-terminal domain ISU60_13610 PF00270 DEAD/DEAH box helicase ISU60_13615 PF00440 Bacterial regulatory proteins, tetR family ISU60_13615 PF09209 Tetracyclin repressor-like, C-terminal domain ISU60_13620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_13625 PF00005 ABC transporter ISU60_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_13650 PF03466 LysR substrate binding domain ISU60_13655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU60_13660 PF00158 Sigma-54 interaction domain ISU60_13660 PF00072 Response regulator receiver domain ISU60_13660 PF02954 Bacterial regulatory protein, Fis family ISU60_13665 PF00512 His Kinase A (phospho-acceptor) domain ISU60_13665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_13670 PF13801 Heavy-metal resistance ISU60_13685 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU60_13690 PF02391 MoaE protein ISU60_13695 PF02597 ThiS family ISU60_13700 PF01967 MoaC family ISU60_13705 PF04055 Radical SAM superfamily ISU60_13705 PF06463 Molybdenum Cofactor Synthesis C ISU60_13710 PF01933 Uncharacterised protein family UPF0052 ISU60_13715 PF09905 DNA-binding protein VF530 ISU60_13720 PF02151 UvrB/uvrC motif ISU60_13720 PF04851 Type III restriction enzyme, res subunit ISU60_13720 PF00271 Helicase conserved C-terminal domain ISU60_13720 PF17757 UvrB interaction domain ISU60_13720 PF12344 Ultra-violet resistance protein B ISU60_13725 PF00005 ABC transporter ISU60_13725 PF09383 NIL domain ISU60_13735 PF08241 Methyltransferase domain ISU60_13740 PF00155 Aminotransferase class I and II ISU60_13745 PF06968 Biotin and Thiamin Synthesis associated domain ISU60_13745 PF04055 Radical SAM superfamily ISU60_13750 PF00202 Aminotransferase class-III ISU60_13755 PF10282 Lactonase, 7-bladed beta-propeller ISU60_13765 PF03459 TOBE domain ISU60_13765 PF00005 ABC transporter ISU60_13770 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_13780 PF10766 Multidrug efflux pump-associated protein AcrZ ISU60_13785 PF03459 TOBE domain ISU60_13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_13790 PF00005 ABC transporter ISU60_13800 PF16363 GDP-mannose 4,6 dehydratase ISU60_13805 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU60_13805 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU60_13810 PF00288 GHMP kinases N terminal domain ISU60_13810 PF08544 GHMP kinases C terminal ISU60_13810 PF10509 Galactokinase galactose-binding signature ISU60_13820 PF01263 Aldose 1-epimerase ISU60_13830 PF00300 Histidine phosphatase superfamily (branch 1) ISU60_13835 PF00793 DAHP synthetase I family ISU60_13840 PF01545 Cation efflux family ISU60_13845 PF04973 Nicotinamide mononucleotide transporter ISU60_13850 PF02445 Quinolinate synthetase A protein ISU60_13870 PF13174 Tetratricopeptide repeat ISU60_13870 PF16331 TolA binding protein trimerisation ISU60_13875 PF00691 OmpA family ISU60_13880 PF07676 WD40-like Beta Propeller Repeat ISU60_13880 PF04052 TolB amino-terminal domain ISU60_13885 PF06519 TolA C-terminal ISU60_13885 PF06519 TolA C-terminal ISU60_13890 PF02472 Biopolymer transport protein ExbD/TolR ISU60_13895 PF01618 MotA/TolQ/ExbB proton channel family ISU60_13900 PF03061 Thioesterase superfamily ISU60_13905 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU60_13910 PF08173 Membrane bound YbgT-like protein ISU60_13915 PF02322 Cytochrome bd terminal oxidase subunit II ISU60_13920 PF01654 Cytochrome bd terminal oxidase subunit I ISU60_13925 PF00549 CoA-ligase ISU60_13925 PF02629 CoA binding domain ISU60_13930 PF08442 ATP-grasp domain ISU60_13930 PF00549 CoA-ligase ISU60_13935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU60_13935 PF02817 e3 binding domain ISU60_13935 PF00364 Biotin-requiring enzyme ISU60_13945 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU60_13950 PF02910 Fumarate reductase flavoprotein C-term ISU60_13950 PF00890 FAD binding domain ISU60_13955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU60_13960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU60_13965 PF00285 Citrate synthase, C-terminal domain ISU60_13970 PF01025 GrpE ISU60_13975 PF01513 ATP-NAD kinase ISU60_13980 PF02463 RecF/RecN/SMC N terminal domain ISU60_13985 PF04355 SmpA / OmlA family ISU60_13990 PF03658 RnfH family Ubiquitin ISU60_13995 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU60_14000 PF01668 SmpB protein ISU60_14015 PF13356 Arm DNA-binding domain ISU60_14015 PF00589 Phage integrase family ISU60_14065 PF05973 Phage derived protein Gp49-like (DUF891) ISU60_14075 PF02796 Helix-turn-helix domain of resolvase ISU60_14075 PF00665 Integrase core domain ISU60_14080 PF01695 IstB-like ATP binding protein ISU60_14085 PF00668 Condensation domain ISU60_14085 PF00501 AMP-binding enzyme ISU60_14085 PF08242 Methyltransferase domain ISU60_14085 PF00550 Phosphopantetheine attachment site ISU60_14090 PF00668 Condensation domain ISU60_14090 PF13193 AMP-binding enzyme C-terminal domain ISU60_14090 PF00501 AMP-binding enzyme ISU60_14095 PF00501 AMP-binding enzyme ISU60_14095 PF00668 Condensation domain ISU60_14095 PF08242 Methyltransferase domain ISU60_14095 PF00550 Phosphopantetheine attachment site ISU60_14110 PF00975 Thioesterase domain ISU60_14120 PF00005 ABC transporter ISU60_14120 PF08021 Siderophore-interacting FAD-binding domain ISU60_14120 PF00664 ABC transporter transmembrane region ISU60_14120 PF04954 Siderophore-interacting protein ISU60_14125 PF00664 ABC transporter transmembrane region ISU60_14125 PF00005 ABC transporter ISU60_14140 PF02447 GntP family permease ISU60_14150 PF12951 Passenger-associated-transport-repeat ISU60_14155 PF04717 Type VI secretion system, phage-baseplate injector ISU60_14165 PF03527 RHS protein ISU60_14165 PF05593 RHS Repeat ISU60_14180 PF00939 Sodium:sulfate symporter transmembrane region ISU60_14185 PF00356 Bacterial regulatory proteins, lacI family ISU60_14205 PF00593 TonB dependent receptor ISU60_14205 PF07715 TonB-dependent Receptor Plug Domain ISU60_14210 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU60_14215 PF06276 Ferric iron reductase FhuF-like transporter ISU60_14215 PF04183 IucA / IucC family ISU60_14250 PF03472 Autoinducer binding domain ISU60_14250 PF00196 Bacterial regulatory proteins, luxR family ISU60_14255 PF00765 Autoinducer synthase ISU60_14260 PF02517 CPBP intramembrane metalloprotease ISU60_14280 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_14295 PF05736 OprF membrane domain ISU60_14295 PF00691 OmpA family ISU60_14305 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_14305 PF17871 AAA lid domain ISU60_14305 PF07724 AAA domain (Cdc48 subfamily) ISU60_14305 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_14310 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU60_14310 PF04717 Type VI secretion system, phage-baseplate injector ISU60_14310 PF13296 Putative type VI secretion system Rhs element Vgr ISU60_14370 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU60_14370 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU60_14370 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU60_14375 PF13407 Periplasmic binding protein domain ISU60_14380 PF00005 ABC transporter ISU60_14385 PF02653 Branched-chain amino acid transport system / permease component ISU60_14390 PF07715 TonB-dependent Receptor Plug Domain ISU60_14400 PF01464 Transglycosylase SLT domain ISU60_14400 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU60_14405 PF04362 Bacterial Fe(2+) trafficking ISU60_14410 PF10576 Iron-sulfur binding domain of endonuclease III ISU60_14410 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU60_14410 PF00633 Helix-hairpin-helix motif ISU60_14410 PF14815 NUDIX domain ISU60_14415 PF02390 Putative methyltransferase ISU60_14420 PF04320 Protein with unknown function (DUF469) ISU60_14425 PF04960 Glutaminase ISU60_14430 PF11101 Protein of unknown function (DUF2884) ISU60_14435 PF11101 Protein of unknown function (DUF2884) ISU60_14440 PF07634 RtxA repeat ISU60_14440 PF12146 Serine aminopeptidase, S33 ISU60_14440 PF11647 Membrane Localization Domain ISU60_14440 PF16671 Actin cross-linking domain ISU60_14440 PF11713 Peptidase C80 family ISU60_14445 PF04055 Radical SAM superfamily ISU60_14445 PF06969 HemN C-terminal domain ISU60_14450 PF01725 Ham1 family ISU60_14455 PF02594 Uncharacterised ACR, YggU family COG1872 ISU60_14460 PF02325 YGGT family ISU60_14465 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU60_14465 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU60_14470 PF01168 Alanine racemase, N-terminal domain ISU60_14475 PF00437 Type II/IV secretion system protein ISU60_14480 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU60_14485 PF00795 Carbon-nitrogen hydrolase ISU60_14490 PF03652 Holliday junction resolvase ISU60_14495 PF02622 Uncharacterized ACR, COG1678 ISU60_14500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU60_14500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU60_14505 PF04452 RNA methyltransferase ISU60_14510 PF04231 Endonuclease I ISU60_14515 PF17283 SprT-like zinc ribbon domain ISU60_14515 PF10263 SprT-like family ISU60_14520 PF02772 S-adenosylmethionine synthetase, central domain ISU60_14520 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU60_14520 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU60_14525 PF17810 Arginine decarboxylase helical bundle domain ISU60_14525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU60_14525 PF17944 Arginine decarboxylase C-terminal helical extension ISU60_14530 PF00355 Rieske [2Fe-2S] domain ISU60_14540 PF01435 Peptidase family M48 ISU60_14545 PF00456 Transketolase, thiamine diphosphate binding domain ISU60_14545 PF02779 Transketolase, pyrimidine binding domain ISU60_14545 PF02780 Transketolase, C-terminal domain ISU60_14555 PF00665 Integrase core domain ISU60_14555 PF02796 Helix-turn-helix domain of resolvase ISU60_14560 PF01695 IstB-like ATP binding protein ISU60_14570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU60_14570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU60_14575 PF00162 Phosphoglycerate kinase ISU60_14580 PF01116 Fructose-bisphosphate aldolase class-II ISU60_14590 PF05552 Conserved TM helix ISU60_14590 PF00924 Mechanosensitive ion channel ISU60_14595 PF01810 LysE type translocator ISU60_14600 PF04402 Protein of unknown function (DUF541) ISU60_14605 PF03466 LysR substrate binding domain ISU60_14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_14610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU60_14615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_14615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_14615 PF01842 ACT domain ISU60_14625 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU60_14635 PF05164 Cell division protein ZapA ISU60_14640 PF03695 Uncharacterised protein family (UPF0149) ISU60_14645 PF00557 Metallopeptidase family M24 ISU60_14645 PF05195 Aminopeptidase P, N-terminal domain ISU60_14650 PF01494 FAD binding domain ISU60_14655 PF01494 FAD binding domain ISU60_14660 PF01571 Aminomethyltransferase folate-binding domain ISU60_14660 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU60_14665 PF01597 Glycine cleavage H-protein ISU60_14670 PF02347 Glycine cleavage system P-protein ISU60_14700 PF03006 Haemolysin-III related ISU60_14710 PF01571 Aminomethyltransferase folate-binding domain ISU60_14715 PF03937 Flavinator of succinate dehydrogenase ISU60_14720 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU60_14725 PF00072 Response regulator receiver domain ISU60_14725 PF00486 Transcriptional regulatory protein, C terminal ISU60_14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_14730 PF00672 HAMP domain ISU60_14730 PF00512 His Kinase A (phospho-acceptor) domain ISU60_14735 PF06123 Inner membrane protein CreD ISU60_14740 PF00258 Flavodoxin ISU60_14745 PF02899 Phage integrase, N-terminal SAM-like domain ISU60_14745 PF00589 Phage integrase family ISU60_14750 PF13098 Thioredoxin-like domain ISU60_14750 PF10411 Disulfide bond isomerase protein N-terminus ISU60_14755 PF17768 RecJ OB domain ISU60_14755 PF01368 DHH family ISU60_14755 PF02272 DHHA1 domain ISU60_14765 PF01336 OB-fold nucleic acid binding domain ISU60_14765 PF00152 tRNA synthetases class II (D, K and N) ISU60_14775 PF00589 Phage integrase family ISU60_14775 PF13356 Arm DNA-binding domain ISU60_14775 PF14659 Phage integrase, N-terminal SAM-like domain ISU60_14795 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU60_14800 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU60_14890 PF03551 Transcriptional regulator PadR-like family ISU60_14895 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU60_14905 PF13407 Periplasmic binding protein domain ISU60_14910 PF02653 Branched-chain amino acid transport system / permease component ISU60_14915 PF00005 ABC transporter ISU60_14920 PF17912 MalK OB fold domain ISU60_14920 PF00005 ABC transporter ISU60_14925 PF13416 Bacterial extracellular solute-binding protein ISU60_14930 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_14935 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_14940 PF07745 Glycosyl hydrolase family 53 ISU60_14945 PF08532 Beta-galactosidase trimerisation domain ISU60_14945 PF02449 Beta-galactosidase ISU60_14945 PF08533 Beta-galactosidase C-terminal domain ISU60_14950 PF00367 phosphotransferase system, EIIB ISU60_14950 PF02378 Phosphotransferase system, EIIC ISU60_14955 PF02264 LamB porin ISU60_14960 PF00356 Bacterial regulatory proteins, lacI family ISU60_14965 PF13802 Galactose mutarotase-like ISU60_14965 PF01055 Glycosyl hydrolases family 31 ISU60_14965 PF17137 Domain of unknown function (DUF5110) ISU60_14965 PF16338 Domain of unknown function (DUF4968) ISU60_14970 PF07690 Major Facilitator Superfamily ISU60_14975 PF00356 Bacterial regulatory proteins, lacI family ISU60_14985 PF01116 Fructose-bisphosphate aldolase class-II ISU60_14995 PF00884 Sulfatase ISU60_15000 PF13186 Iron-sulfur cluster-binding domain ISU60_15000 PF04055 Radical SAM superfamily ISU60_15005 PF07470 Glycosyl Hydrolase Family 88 ISU60_15015 PF01979 Amidohydrolase family ISU60_15020 PF03610 PTS system fructose IIA component ISU60_15025 PF03613 PTS system mannose/fructose/sorbose family IID component ISU60_15030 PF03609 PTS system sorbose-specific iic component ISU60_15035 PF03830 PTS system sorbose subfamily IIB component ISU60_15040 PF01380 SIS domain ISU60_15045 PF08013 Tagatose 6 phosphate kinase ISU60_15050 PF08220 DeoR-like helix-turn-helix domain ISU60_15050 PF00455 DeoR C terminal sensor domain ISU60_15055 PF00884 Sulfatase ISU60_15060 PF01797 Transposase IS200 like ISU60_15065 PF02796 Helix-turn-helix domain of resolvase ISU60_15065 PF00665 Integrase core domain ISU60_15070 PF01695 IstB-like ATP binding protein ISU60_15085 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU60_15095 PF00929 Exonuclease ISU60_15100 PF00075 RNase H ISU60_15105 PF08241 Methyltransferase domain ISU60_15110 PF00753 Metallo-beta-lactamase superfamily ISU60_15110 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU60_15115 PF01476 LysM domain ISU60_15115 PF01464 Transglycosylase SLT domain ISU60_15120 PF03372 Endonuclease/Exonuclease/phosphatase family ISU60_15130 PF00248 Aldo/keto reductase family ISU60_15165 PF00005 ABC transporter ISU60_15165 PF09383 NIL domain ISU60_15170 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_15175 PF03180 NLPA lipoprotein ISU60_15180 PF16358 RcsF lipoprotein ISU60_15185 PF01980 tRNA-methyltransferase O ISU60_15185 PF18389 TrmO C-terminal domain ISU60_15190 PF04073 Aminoacyl-tRNA editing domain ISU60_15190 PF03129 Anticodon binding domain ISU60_15190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU60_15195 PF17185 NlpE C-terminal OB domain ISU60_15195 PF04170 NlpE N-terminal domain ISU60_15200 PF00472 RF-1 domain ISU60_15205 PF07152 YaeQ protein ISU60_15210 PF06786 Uncharacterised protein family (UPF0253) ISU60_15215 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU60_15220 PF00034 Cytochrome c ISU60_15225 PF11734 TilS substrate C-terminal domain ISU60_15225 PF09179 TilS substrate binding domain ISU60_15225 PF01171 PP-loop family ISU60_15230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU60_15235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU60_15240 PF01336 OB-fold nucleic acid binding domain ISU60_15240 PF02811 PHP domain ISU60_15240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU60_15240 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU60_15240 PF14579 Helix-hairpin-helix motif ISU60_15245 PF01351 Ribonuclease HII ISU60_15250 PF02684 Lipid-A-disaccharide synthetase ISU60_15255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU60_15255 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_15260 PF07977 FabA-like domain ISU60_15265 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_15265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU60_15270 PF03938 Outer membrane protein (OmpH-like) ISU60_15275 PF07244 Surface antigen variable number repeat ISU60_15275 PF01103 Surface antigen ISU60_15280 PF02163 Peptidase family M50 ISU60_15280 PF17820 PDZ domain ISU60_15290 PF01255 Putative undecaprenyl diphosphate synthase ISU60_15295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU60_15295 PF13288 DXP reductoisomerase C-terminal domain ISU60_15295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU60_15300 PF01765 Ribosome recycling factor ISU60_15305 PF00696 Amino acid kinase family ISU60_15310 PF00889 Elongation factor TS ISU60_15315 PF00318 Ribosomal protein S2 ISU60_15320 PF00557 Metallopeptidase family M24 ISU60_15325 PF01966 HD domain ISU60_15325 PF08335 GlnD PII-uridylyltransferase ISU60_15325 PF01909 Nucleotidyltransferase domain ISU60_15325 PF01842 ACT domain ISU60_15330 PF14602 Hexapeptide repeat of succinyl-transferase ISU60_15330 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_15330 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU60_15335 PF11944 Protein of unknown function (DUF3461) ISU60_15340 PF00258 Flavodoxin ISU60_15345 PF00849 RNA pseudouridylate synthase ISU60_15350 PF04287 tRNA pseudouridine synthase C ISU60_15355 PF01797 Transposase IS200 like ISU60_15360 PF07348 Syd protein (SUKH-2) ISU60_15365 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU60_15365 PF14489 QueF-like protein ISU60_15370 PF11892 Domain of unknown function (DUF3412) ISU60_15370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU60_15370 PF03641 Possible lysine decarboxylase ISU60_15375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU60_15375 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU60_15380 PF18125 RlmM ferredoxin-like domain ISU60_15380 PF01728 FtsJ-like methyltransferase ISU60_15385 PF04241 Protein of unknown function (DUF423) ISU60_15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_15390 PF03466 LysR substrate binding domain ISU60_15400 PF00266 Aminotransferase class-V ISU60_15405 PF02657 Fe-S metabolism associated domain ISU60_15410 PF00899 ThiF family ISU60_15415 PF03562 MltA specific insert domain ISU60_15415 PF06725 3D domain ISU60_15430 PF11741 AMIN domain ISU60_15430 PF01520 N-acetylmuramoyl-L-alanine amidase ISU60_15435 PF00583 Acetyltransferase (GNAT) family ISU60_15435 PF00696 Amino acid kinase family ISU60_15440 PF13538 UvrD-like helicase C-terminal domain ISU60_15445 PF12705 PD-(D/E)XK nuclease superfamily ISU60_15445 PF00580 UvrD/REP helicase N-terminal domain ISU60_15445 PF13361 UvrD-like helicase C-terminal domain ISU60_15450 PF00675 Insulinase (Peptidase family M16) ISU60_15450 PF05193 Peptidase M16 inactive domain ISU60_15450 PF16187 Middle or third domain of peptidase_M16 ISU60_15455 PF17946 RecC C-terminal domain ISU60_15480 PF00303 Thymidylate synthase ISU60_15485 PF01790 Prolipoprotein diacylglyceryl transferase ISU60_15490 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_15490 PF05524 PEP-utilising enzyme, N-terminal ISU60_15490 PF00391 PEP-utilising enzyme, mobile domain ISU60_15490 PF01590 GAF domain ISU60_15495 PF00293 NUDIX domain ISU60_15500 PF02976 DNA mismatch repair enzyme MutH ISU60_15505 PF00248 Aldo/keto reductase family ISU60_15520 PF07690 Major Facilitator Superfamily ISU60_15525 PF13193 AMP-binding enzyme C-terminal domain ISU60_15525 PF01553 Acyltransferase ISU60_15525 PF00501 AMP-binding enzyme ISU60_15530 PF01568 Molydopterin dinucleotide binding domain ISU60_15530 PF00384 Molybdopterin oxidoreductase ISU60_15535 PF00356 Bacterial regulatory proteins, lacI family ISU60_15540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU60_15540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU60_15545 PF03466 LysR substrate binding domain ISU60_15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_15550 PF07690 Major Facilitator Superfamily ISU60_15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_15555 PF03466 LysR substrate binding domain ISU60_15570 PF02203 Tar ligand binding domain homologue ISU60_15570 PF00672 HAMP domain ISU60_15570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_15590 PF01478 Type IV leader peptidase family ISU60_15590 PF06750 Bacterial Peptidase A24 N-terminal domain ISU60_15610 PF07963 Prokaryotic N-terminal methylation motif ISU60_15610 PF11612 Type II secretion system (T2SS), protein J ISU60_15615 PF02501 Type II secretion system (T2SS), protein I ISU60_15615 PF07963 Prokaryotic N-terminal methylation motif ISU60_15625 PF08334 Type II secretion system (T2SS), protein G ISU60_15625 PF07963 Prokaryotic N-terminal methylation motif ISU60_15635 PF00437 Type II/IV secretion system protein ISU60_15640 PF00263 Bacterial type II and III secretion system protein ISU60_15640 PF03958 Bacterial type II/III secretion system short domain ISU60_15655 PF00484 Carbonic anhydrase ISU60_15675 PF09093 Lyase, catalytic ISU60_15675 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU60_15675 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU60_15675 PF09092 Lyase, N terminal ISU60_15680 PF01695 IstB-like ATP binding protein ISU60_15685 PF02796 Helix-turn-helix domain of resolvase ISU60_15685 PF00665 Integrase core domain ISU60_15695 PF00593 TonB dependent receptor ISU60_15695 PF07715 TonB-dependent Receptor Plug Domain ISU60_15700 PF01546 Peptidase family M20/M25/M40 ISU60_15700 PF07687 Peptidase dimerisation domain ISU60_15705 PF03806 AbgT putative transporter family ISU60_15710 PF12468 Type III secretion system leucine rich repeat protein ISU60_15710 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_15715 PF12468 Type III secretion system leucine rich repeat protein ISU60_15715 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_15715 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_15715 PF12468 Type III secretion system leucine rich repeat protein ISU60_15725 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_15725 PF12468 Type III secretion system leucine rich repeat protein ISU60_15730 PF03797 Autotransporter beta-domain ISU60_15740 PF07906 ShET2 enterotoxin, N-terminal region ISU60_15745 PF00873 AcrB/AcrD/AcrF family ISU60_15750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_15750 PF00529 HlyD membrane-fusion protein of T1SS ISU60_15760 PF00563 EAL domain ISU60_15760 PF00990 Diguanylate cyclase, GGDEF domain ISU60_15760 PF08448 PAS fold ISU60_15760 PF08447 PAS fold ISU60_15795 PF00691 OmpA family ISU60_15795 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU60_15800 PF01618 MotA/TolQ/ExbB proton channel family ISU60_15805 PF04545 Sigma-70, region 4 ISU60_15805 PF04542 Sigma-70 region 2 ISU60_15830 PF07196 Flagellin hook IN motif ISU60_15830 PF07195 Flagellar hook-associated protein 2 C-terminus ISU60_15830 PF02465 Flagellar hook-associated protein 2 N-terminus ISU60_15835 PF00669 Bacterial flagellin N-terminal helical region ISU60_15835 PF00700 Bacterial flagellin C-terminal helical region ISU60_15840 PF00700 Bacterial flagellin C-terminal helical region ISU60_15840 PF00669 Bacterial flagellin N-terminal helical region ISU60_15845 PF00700 Bacterial flagellin C-terminal helical region ISU60_15845 PF00669 Bacterial flagellin N-terminal helical region ISU60_15850 PF18500 CadC C-terminal domain 1 ISU60_15850 PF00486 Transcriptional regulatory protein, C terminal ISU60_15870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_15870 PF00460 Flagella basal body rod protein ISU60_15880 PF02119 Flagellar P-ring protein ISU60_15885 PF02107 Flagellar L-ring protein ISU60_15890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_15890 PF00460 Flagella basal body rod protein ISU60_15895 PF00460 Flagella basal body rod protein ISU60_15895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_15900 PF00460 Flagella basal body rod protein ISU60_15900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_15900 PF07559 Flagellar basal body protein FlaE ISU60_15905 PF03963 Flagellar hook capping protein - N-terminal region ISU60_15905 PF13861 FlgD Tudor-like domain ISU60_15905 PF13860 FlgD Ig-like domain ISU60_15910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_15910 PF00460 Flagella basal body rod protein ISU60_15915 PF00460 Flagella basal body rod protein ISU60_15920 PF13144 Chaperone for flagella basal body P-ring formation ISU60_15940 PF18269 T3SS EscN ATPase C-terminal domain ISU60_15940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_15955 PF01514 Secretory protein of YscJ/FliF family ISU60_15955 PF08345 Flagellar M-ring protein C-terminal ISU60_15960 PF02049 Flagellar hook-basal body complex protein FliE ISU60_15965 PF00158 Sigma-54 interaction domain ISU60_15965 PF00072 Response regulator receiver domain ISU60_15965 PF02954 Bacterial regulatory protein, Fis family ISU60_15975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_15980 PF00813 FliP family ISU60_15985 PF01313 Bacterial export proteins, family 3 ISU60_15990 PF01311 Bacterial export proteins, family 1 ISU60_15995 PF01312 FlhB HrpN YscU SpaS Family ISU60_16000 PF00771 FHIPEP family ISU60_16015 PF01497 Periplasmic binding protein ISU60_16020 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU60_16020 PF00419 Fimbrial protein ISU60_16025 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_16025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_16030 PF00577 Outer membrane usher protein ISU60_16030 PF13954 PapC N-terminal domain ISU60_16030 PF13953 PapC C-terminal domain ISU60_16050 PF04972 BON domain ISU60_16050 PF13629 Pilus formation protein N terminal region ISU60_16050 PF00263 Bacterial type II and III secretion system protein ISU60_16055 PF13629 Pilus formation protein N terminal region ISU60_16055 PF00263 Bacterial type II and III secretion system protein ISU60_16055 PF04972 BON domain ISU60_16070 PF00437 Type II/IV secretion system protein ISU60_16105 PF02472 Biopolymer transport protein ExbD/TolR ISU60_16110 PF01618 MotA/TolQ/ExbB proton channel family ISU60_16115 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU60_16120 PF09335 SNARE associated Golgi protein ISU60_16125 PF12833 Helix-turn-helix domain ISU60_16125 PF06719 AraC-type transcriptional regulator N-terminus ISU60_16130 PF00465 Iron-containing alcohol dehydrogenase ISU60_16140 PF00248 Aldo/keto reductase family ISU60_16150 PF07732 Multicopper oxidase ISU60_16150 PF07731 Multicopper oxidase ISU60_16155 PF01553 Acyltransferase ISU60_16160 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU60_16160 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU60_16170 PF02525 Flavodoxin-like fold ISU60_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_16175 PF03466 LysR substrate binding domain ISU60_16180 PF01751 Toprim domain ISU60_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_16180 PF00204 DNA gyrase B ISU60_16180 PF00986 DNA gyrase B subunit, carboxyl terminus ISU60_16185 PF05728 Uncharacterised protein family (UPF0227) ISU60_16190 PF00149 Calcineurin-like phosphoesterase ISU60_16195 PF06853 Protein of unknown function (DUF1249) ISU60_16200 PF00293 NUDIX domain ISU60_16205 PF02321 Outer membrane efflux protein ISU60_16210 PF06693 Protein of unknown function (DUF1190) ISU60_16215 PF03738 Glutathionylspermidine synthase preATP-grasp ISU60_16220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU60_16225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU60_16230 PF04380 Membrane fusogenic activity ISU60_16240 PF13520 Amino acid permease ISU60_16245 PF00294 pfkB family carbohydrate kinase ISU60_16245 PF01467 Cytidylyltransferase-like ISU60_16250 PF08335 GlnD PII-uridylyltransferase ISU60_16250 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU60_16255 PF01928 CYTH domain ISU60_16260 PF08239 Bacterial SH3 domain ISU60_16265 PF01743 Poly A polymerase head domain ISU60_16265 PF01966 HD domain ISU60_16265 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU60_16270 PF02673 Bacitracin resistance protein BacA ISU60_16275 PF02152 Dihydroneopterin aldolase ISU60_16280 PF02660 Glycerol-3-phosphate acyltransferase ISU60_16285 PF00814 Glycoprotease family ISU60_16290 PF01165 Ribosomal protein S21 ISU60_16295 PF10410 DnaB-helicase binding domain of primase ISU60_16295 PF08278 DNA primase DnaG DnaB-binding ISU60_16295 PF08275 DNA primase catalytic core, N-terminal domain ISU60_16295 PF01807 CHC2 zinc finger ISU60_16300 PF04545 Sigma-70, region 4 ISU60_16300 PF04546 Sigma-70, non-essential region ISU60_16300 PF04539 Sigma-70 region 3 ISU60_16300 PF04542 Sigma-70 region 2 ISU60_16300 PF00140 Sigma-70 factor, region 1.2 ISU60_16300 PF03979 Sigma-70 factor, region 1.1 ISU60_16345 PF03466 LysR substrate binding domain ISU60_16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_16365 PF01042 Endoribonuclease L-PSP ISU60_16385 PF00155 Aminotransferase class I and II ISU60_16400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_16400 PF00529 HlyD membrane-fusion protein of T1SS ISU60_16405 PF04632 Fusaric acid resistance protein family ISU60_16415 PF14310 Fibronectin type III-like domain ISU60_16415 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU60_16415 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU60_16425 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_16430 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_16435 PF01547 Bacterial extracellular solute-binding protein ISU60_16440 PF00356 Bacterial regulatory proteins, lacI family ISU60_16445 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU60_16450 PF03459 TOBE domain ISU60_16450 PF00005 ABC transporter ISU60_16450 PF17912 MalK OB fold domain ISU60_16470 PF13332 Hemagglutinin repeat ISU60_16470 PF05860 haemagglutination activity domain ISU60_16470 PF04829 Pre-toxin domain with VENN motif ISU60_16470 PF13018 Extended Signal Peptide of Type V secretion system ISU60_16475 PF05860 haemagglutination activity domain ISU60_16475 PF13018 Extended Signal Peptide of Type V secretion system ISU60_16475 PF04829 Pre-toxin domain with VENN motif ISU60_16475 PF13332 Hemagglutinin repeat ISU60_16490 PF13332 Hemagglutinin repeat ISU60_16490 PF04829 Pre-toxin domain with VENN motif ISU60_16495 PF04829 Pre-toxin domain with VENN motif ISU60_16495 PF13332 Hemagglutinin repeat ISU60_16505 PF04829 Pre-toxin domain with VENN motif ISU60_16505 PF13018 Extended Signal Peptide of Type V secretion system ISU60_16505 PF05860 haemagglutination activity domain ISU60_16505 PF13332 Hemagglutinin repeat ISU60_16510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_16510 PF17287 POTRA domain ISU60_16510 PF08479 POTRA domain, ShlB-type ISU60_16515 PF00092 von Willebrand factor type A domain ISU60_16520 PF02342 TerD domain ISU60_16530 PF00092 von Willebrand factor type A domain ISU60_16545 PF03729 Short repeat of unknown function (DUF308) ISU60_16550 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_16550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU60_16555 PF05175 Methyltransferase small domain ISU60_16565 PF01863 Protein of unknown function DUF45 ISU60_16570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_16575 PF00375 Sodium:dicarboxylate symporter family ISU60_16580 PF01797 Transposase IS200 like ISU60_16585 PF10688 Bacterial inner membrane protein ISU60_16590 PF08666 SAF domain ISU60_16590 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU60_16595 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_16595 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_16600 PF02614 Glucuronate isomerase ISU60_16610 PF07690 Major Facilitator Superfamily ISU60_16615 PF07729 FCD domain ISU60_16615 PF00392 Bacterial regulatory proteins, gntR family ISU60_16625 PF09335 SNARE associated Golgi protein ISU60_16630 PF13721 SecD export protein N-terminal TM region ISU60_16640 PF05957 Bacterial protein of unknown function (DUF883) ISU60_16645 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU60_16655 PF07681 DoxX ISU60_16665 PF00665 Integrase core domain ISU60_16665 PF02796 Helix-turn-helix domain of resolvase ISU60_16670 PF01695 IstB-like ATP binding protein ISU60_16675 PF00293 NUDIX domain ISU60_16685 PF07516 SecA Wing and Scaffold domain ISU60_16685 PF01043 SecA preprotein cross-linking domain ISU60_16685 PF07517 SecA DEAD-like domain ISU60_16685 PF02810 SEC-C motif ISU60_16690 PF06558 Secretion monitor precursor protein (SecM) ISU60_16700 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU60_16705 PF12327 FtsZ family, C-terminal domain ISU60_16705 PF00091 Tubulin/FtsZ family, GTPase domain ISU60_16710 PF02491 SHS2 domain inserted in FTSA ISU60_16715 PF08478 POTRA domain, FtsQ-type ISU60_16715 PF03799 Cell division protein FtsQ ISU60_16720 PF01820 D-ala D-ala ligase N-terminus ISU60_16720 PF07478 D-ala D-ala ligase C-terminus ISU60_16725 PF08245 Mur ligase middle domain ISU60_16725 PF01225 Mur ligase family, catalytic domain ISU60_16725 PF02875 Mur ligase family, glutamate ligase domain ISU60_16730 PF03033 Glycosyltransferase family 28 N-terminal domain ISU60_16730 PF04101 Glycosyltransferase family 28 C-terminal domain ISU60_16735 PF01098 Cell cycle protein ISU60_16740 PF08245 Mur ligase middle domain ISU60_16740 PF02875 Mur ligase family, glutamate ligase domain ISU60_16745 PF00953 Glycosyl transferase family 4 ISU60_16745 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU60_16750 PF08245 Mur ligase middle domain ISU60_16750 PF01225 Mur ligase family, catalytic domain ISU60_16750 PF02875 Mur ligase family, glutamate ligase domain ISU60_16755 PF01225 Mur ligase family, catalytic domain ISU60_16755 PF02875 Mur ligase family, glutamate ligase domain ISU60_16755 PF08245 Mur ligase middle domain ISU60_16760 PF03717 Penicillin-binding Protein dimerisation domain ISU60_16760 PF00905 Penicillin binding protein transpeptidase domain ISU60_16765 PF04999 Cell division protein FtsL ISU60_16770 PF01795 MraW methylase family ISU60_16775 PF02381 MraZ protein, putative antitoxin-like ISU60_16785 PF06610 L-alanine exporter ISU60_16790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_16790 PF00356 Bacterial regulatory proteins, lacI family ISU60_16795 PF01797 Transposase IS200 like ISU60_16800 PF10369 Small subunit of acetolactate synthase ISU60_16805 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_16805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_16805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_16810 PF00501 AMP-binding enzyme ISU60_16815 PF03466 LysR substrate binding domain ISU60_16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_16825 PF01797 Transposase IS200 like ISU60_16830 PF00682 HMGL-like ISU60_16830 PF08502 LeuA allosteric (dimerisation) domain ISU60_16835 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU60_16840 PF00330 Aconitase family (aconitate hydratase) ISU60_16845 PF00694 Aconitase C-terminal domain ISU60_16850 PF07690 Major Facilitator Superfamily ISU60_16855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_16855 PF12793 Sugar transport-related sRNA regulator N-term ISU60_16865 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_16870 PF00005 ABC transporter ISU60_16875 PF09335 SNARE associated Golgi protein ISU60_16880 PF00136 DNA polymerase family B ISU60_16880 PF03104 DNA polymerase family B, exonuclease domain ISU60_16885 PF00176 SNF2 family N-terminal domain ISU60_16885 PF18337 RapA N-terminal Tudor like domain ISU60_16885 PF12137 RNA polymerase recycling family C-terminal ISU60_16885 PF00271 Helicase conserved C-terminal domain ISU60_16885 PF18339 RapA N-terminal Tudor like domain 1 ISU60_16895 PF06761 Intracellular multiplication and human macrophage-killing ISU60_16895 PF14331 ImcF-related N-terminal domain ISU60_16895 PF06744 Type VI secretion protein IcmF C-terminal ISU60_16900 PF05736 OprF membrane domain ISU60_16900 PF00691 OmpA family ISU60_16905 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU60_16935 PF04717 Type VI secretion system, phage-baseplate injector ISU60_16935 PF06715 Gp5 C-terminal repeat (3 copies) ISU60_16940 PF07724 AAA domain (Cdc48 subfamily) ISU60_16940 PF17871 AAA lid domain ISU60_16940 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_16940 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_16950 PF05947 Type VI secretion system, TssF ISU60_16960 PF01695 IstB-like ATP binding protein ISU60_16965 PF00665 Integrase core domain ISU60_16965 PF02796 Helix-turn-helix domain of resolvase ISU60_16975 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_16980 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU60_16995 PF00849 RNA pseudouridylate synthase ISU60_17000 PF00226 DnaJ domain ISU60_17000 PF05099 Tellurite resistance protein TerB ISU60_17005 PF03968 OstA-like protein ISU60_17005 PF04453 LPS transport system D ISU60_17010 PF00639 PPIC-type PPIASE domain ISU60_17010 PF09312 SurA N-terminal domain ISU60_17015 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU60_17020 PF00398 Ribosomal RNA adenine dimethylase ISU60_17025 PF04379 ApaG domain ISU60_17030 PF00149 Calcineurin-like phosphoesterase ISU60_17045 PF01797 Transposase IS200 like ISU60_17050 PF00186 Dihydrofolate reductase ISU60_17055 PF12821 Threonine/Serine exporter, ThrE ISU60_17060 PF06738 Putative threonine/serine exporter ISU60_17065 PF01810 LysE type translocator ISU60_17070 PF02142 MGS-like domain ISU60_17070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU60_17070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU60_17075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU60_17075 PF00117 Glutamine amidotransferase class-I ISU60_17080 PF01113 Dihydrodipicolinate reductase, N-terminus ISU60_17080 PF05173 Dihydrodipicolinate reductase, C-terminus ISU60_17085 PF01797 Transposase IS200 like ISU60_17090 PF02401 LytB protein ISU60_17095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_17100 PF01252 Signal peptidase (SPase) II ISU60_17105 PF06827 Zinc finger found in FPG and IleRS ISU60_17105 PF08264 Anticodon-binding domain of tRNA ISU60_17105 PF00133 tRNA synthetases class I (I, L, M and V) ISU60_17110 PF01687 Riboflavin kinase ISU60_17110 PF06574 FAD synthetase ISU60_17115 PF01649 Ribosomal protein S20 ISU60_17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_17120 PF03466 LysR substrate binding domain ISU60_17125 PF06965 Na+/H+ antiporter 1 ISU60_17130 PF00684 DnaJ central domain ISU60_17130 PF01556 DnaJ C terminal domain ISU60_17130 PF00226 DnaJ domain ISU60_17135 PF00012 Hsp70 protein ISU60_17140 PF01184 GPR1/FUN34/yaaH family ISU60_17150 PF07690 Major Facilitator Superfamily ISU60_17155 PF00994 Probable molybdopterin binding domain ISU60_17160 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU60_17170 PF03883 Peroxide stress protein YaaA ISU60_17175 PF14821 Threonine synthase N terminus ISU60_17175 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_17180 PF00288 GHMP kinases N terminal domain ISU60_17180 PF08544 GHMP kinases C terminal ISU60_17185 PF03447 Homoserine dehydrogenase, NAD binding domain ISU60_17185 PF00742 Homoserine dehydrogenase ISU60_17185 PF01842 ACT domain ISU60_17185 PF00696 Amino acid kinase family ISU60_17185 PF13840 ACT domain ISU60_17195 PF08254 Threonine leader peptide ISU60_17200 PF00486 Transcriptional regulatory protein, C terminal ISU60_17200 PF00072 Response regulator receiver domain ISU60_17205 PF05981 CreA protein ISU60_17210 PF12833 Helix-turn-helix domain ISU60_17210 PF06445 GyrI-like small molecule binding domain ISU60_17215 PF00300 Histidine phosphatase superfamily (branch 1) ISU60_17220 PF01931 Protein of unknown function DUF84 ISU60_17225 PF01371 Trp repressor protein ISU60_17230 PF01464 Transglycosylase SLT domain ISU60_17230 PF14718 Soluble lytic murein transglycosylase L domain ISU60_17235 PF00689 Cation transporting ATPase, C-terminus ISU60_17235 PF00690 Cation transporter/ATPase, N-terminus ISU60_17245 PF00990 Diguanylate cyclase, GGDEF domain ISU60_17245 PF17152 Periplasmic sensor domain ISU60_17250 PF00691 OmpA family ISU60_17260 PF02661 Fic/DOC family ISU60_17265 PF13521 AAA domain ISU60_17265 PF01381 Helix-turn-helix ISU60_17270 PF18073 Rubredoxin metal binding domain ISU60_17275 PF18429 Domain of unknown function (DUF5609) ISU60_17280 PF10144 Bacterial virulence factor haemolysin ISU60_17285 PF01048 Phosphorylase superfamily ISU60_17290 PF01676 Metalloenzyme superfamily ISU60_17300 PF01791 DeoC/LacD family aldolase ISU60_17305 PF01773 Na+ dependent nucleoside transporter N-terminus ISU60_17305 PF07662 Na+ dependent nucleoside transporter C-terminus ISU60_17305 PF07670 Nucleoside recognition ISU60_17310 PF01026 TatD related DNase ISU60_17315 PF01734 Patatin-like phospholipase ISU60_17320 PF07043 Protein of unknown function (DUF1328) ISU60_17325 PF04972 BON domain ISU60_17330 PF16658 Class II release factor RF3, C-terminal domain ISU60_17330 PF00009 Elongation factor Tu GTP binding domain ISU60_17330 PF03144 Elongation factor Tu domain 2 ISU60_17335 PF00583 Acetyltransferase (GNAT) family ISU60_17340 PF03603 DNA polymerase III psi subunit ISU60_17345 PF05175 Methyltransferase small domain ISU60_17345 PF08468 Methyltransferase small domain N-terminal ISU60_17355 PF07256 Protein of unknown function (DUF1435) ISU60_17360 PF00990 Diguanylate cyclase, GGDEF domain ISU60_17365 PF01095 Pectinesterase ISU60_17380 PF00873 AcrB/AcrD/AcrF family ISU60_17385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_17400 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU60_17405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_17405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_17420 PF00005 ABC transporter ISU60_17425 PF02653 Branched-chain amino acid transport system / permease component ISU60_17430 PF02653 Branched-chain amino acid transport system / permease component ISU60_17435 PF13407 Periplasmic binding protein domain ISU60_17440 PF01791 DeoC/LacD family aldolase ISU60_17445 PF03992 Antibiotic biosynthesis monooxygenase ISU60_17450 PF10696 Protein of unknown function (DUF2501) ISU60_17455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_17455 PF05524 PEP-utilising enzyme, N-terminal ISU60_17455 PF00391 PEP-utilising enzyme, mobile domain ISU60_17455 PF00381 PTS HPr component phosphorylation site ISU60_17455 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_17465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_17470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_17475 PF12833 Helix-turn-helix domain ISU60_17485 PF05987 Bacterial protein of unknown function (DUF898) ISU60_17525 PF01555 DNA methylase ISU60_17540 PF12102 Domain of unknown function (DUF3578) ISU60_17540 PF07728 AAA domain (dynein-related subfamily) ISU60_17545 PF02796 Helix-turn-helix domain of resolvase ISU60_17545 PF00665 Integrase core domain ISU60_17550 PF01695 IstB-like ATP binding protein ISU60_17555 PF01119 DNA mismatch repair protein, C-terminal domain ISU60_17555 PF08676 MutL C terminal dimerisation domain ISU60_17565 PF13356 Arm DNA-binding domain ISU60_17565 PF00589 Phage integrase family ISU60_17575 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU60_17580 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU60_17585 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU60_17585 PF00883 Cytosol aminopeptidase family, catalytic domain ISU60_17590 PF04364 DNA polymerase III chi subunit, HolC ISU60_17595 PF00133 tRNA synthetases class I (I, L, M and V) ISU60_17595 PF08264 Anticodon-binding domain of tRNA ISU60_17595 PF10458 Valyl tRNA synthetase tRNA binding arm ISU60_17600 PF00583 Acetyltransferase (GNAT) family ISU60_17605 PF06877 Regulator of ribonuclease activity B ISU60_17610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU60_17610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU60_17615 PF04074 YhcH/YjgK/YiaL ISU60_17625 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_17630 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_17630 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_17635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_17635 PF00005 ABC transporter ISU60_17640 PF00005 ABC transporter ISU60_17640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_17645 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU60_17645 PF03477 ATP cone domain ISU60_17655 PF00392 Bacterial regulatory proteins, gntR family ISU60_17655 PF07702 UTRA domain ISU60_17660 PF06754 Phosphonate metabolism protein PhnG ISU60_17665 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU60_17670 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU60_17675 PF06007 Phosphonate metabolism protein PhnJ ISU60_17680 PF00005 ABC transporter ISU60_17685 PF00005 ABC transporter ISU60_17690 PF07969 Amidohydrolase family ISU60_17700 PF12706 Beta-lactamase superfamily domain ISU60_17705 PF13460 NAD(P)H-binding ISU60_17720 PF17912 MalK OB fold domain ISU60_17720 PF00005 ABC transporter ISU60_17720 PF03459 TOBE domain ISU60_17725 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_17730 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_17735 PF13416 Bacterial extracellular solute-binding protein ISU60_17750 PF01541 GIY-YIG catalytic domain ISU60_17755 PF13508 Acetyltransferase (GNAT) domain ISU60_17760 PF02036 SCP-2 sterol transfer family ISU60_17765 PF01136 Peptidase family U32 ISU60_17770 PF01136 Peptidase family U32 ISU60_17775 PF02321 Outer membrane efflux protein ISU60_17775 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU60_17780 PF00873 AcrB/AcrD/AcrF family ISU60_17785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_17785 PF00529 HlyD membrane-fusion protein of T1SS ISU60_17790 PF00296 Luciferase-like monooxygenase ISU60_17800 PF01381 Helix-turn-helix ISU60_17810 PF00271 Helicase conserved C-terminal domain ISU60_17810 PF03880 DbpA RNA binding domain ISU60_17810 PF00270 DEAD/DEAH box helicase ISU60_17810 PF12343 Cold shock protein DEAD box A ISU60_17820 PF07719 Tetratricopeptide repeat ISU60_17820 PF13181 Tetratricopeptide repeat ISU60_17825 PF00013 KH domain ISU60_17825 PF00575 S1 RNA binding domain ISU60_17825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU60_17825 PF01138 3' exoribonuclease family, domain 1 ISU60_17825 PF03725 3' exoribonuclease family, domain 2 ISU60_17835 PF00312 Ribosomal protein S15 ISU60_17840 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU60_17840 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU60_17840 PF09157 Pseudouridine synthase II TruB, C-terminal ISU60_17845 PF02033 Ribosome-binding factor A ISU60_17850 PF11987 Translation-initiation factor 2 ISU60_17850 PF03144 Elongation factor Tu domain 2 ISU60_17850 PF08364 Bacterial translation initiation factor IF-2 associated region ISU60_17850 PF04760 Translation initiation factor IF-2, N-terminal region ISU60_17850 PF00009 Elongation factor Tu GTP binding domain ISU60_17855 PF00575 S1 RNA binding domain ISU60_17855 PF08529 NusA N-terminal domain ISU60_17855 PF13184 NusA-like KH domain ISU60_17860 PF17384 RimP C-terminal SH3 domain ISU60_17860 PF02576 RimP N-terminal domain ISU60_17875 PF03840 Preprotein translocase SecG subunit ISU60_17880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_17880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_17880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_17880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_17885 PF00809 Pterin binding enzyme ISU60_17890 PF17862 AAA+ lid domain ISU60_17890 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_17890 PF06480 FtsH Extracellular ISU60_17890 PF01434 Peptidase family M41 ISU60_17895 PF01728 FtsJ-like methyltransferase ISU60_17900 PF01985 CRS1 / YhbY (CRM) domain ISU60_17905 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU60_17905 PF03449 Transcription elongation factor, N-terminal ISU60_17910 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU60_17915 PF00072 Response regulator receiver domain ISU60_17915 PF00486 Transcriptional regulatory protein, C terminal ISU60_17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_17920 PF00512 His Kinase A (phospho-acceptor) domain ISU60_17920 PF00672 HAMP domain ISU60_17925 PF01018 GTP1/OBG ISU60_17925 PF01926 50S ribosome-binding GTPase ISU60_17930 PF00892 EamA-like transporter family ISU60_17935 PF01016 Ribosomal L27 protein ISU60_17940 PF00829 Ribosomal prokaryotic L21 protein ISU60_17945 PF00348 Polyprenyl synthetase ISU60_17955 PF13693 Winged helix-turn-helix DNA-binding ISU60_17960 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU60_17960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU60_17965 PF01316 Arginine repressor, DNA binding domain ISU60_17965 PF02863 Arginine repressor, C-terminal domain ISU60_17975 PF01225 Mur ligase family, catalytic domain ISU60_17975 PF08245 Mur ligase middle domain ISU60_17975 PF02875 Mur ligase family, glutamate ligase domain ISU60_17980 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU60_17985 PF00719 Inorganic pyrophosphatase ISU60_17990 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU60_17995 PF04357 TamB, inner membrane protein subunit of TAM complex ISU60_18000 PF07244 Surface antigen variable number repeat ISU60_18000 PF17243 POTRA domain TamA domain 1 ISU60_18000 PF01103 Surface antigen ISU60_18005 PF01625 Peptide methionine sulfoxide reductase ISU60_18010 PF00571 CBS domain ISU60_18010 PF03471 Transporter associated domain ISU60_18010 PF01595 Cyclin M transmembrane N-terminal domain ISU60_18015 PF06526 Protein of unknown function (DUF1107) ISU60_18020 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU60_18025 PF00459 Inositol monophosphatase family ISU60_18030 PF00149 Calcineurin-like phosphoesterase ISU60_18030 PF02872 5'-nucleotidase, C-terminal domain ISU60_18035 PF04405 Domain of Unknown function (DUF542) ISU60_18035 PF01814 Hemerythrin HHE cation binding domain ISU60_18040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_18040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU60_18045 PF08525 Opacity-associated protein A N-terminal motif ISU60_18045 PF04225 Opacity-associated protein A LysM-like domain ISU60_18055 PF01797 Transposase IS200 like ISU60_18060 PF03948 Ribosomal protein L9, C-terminal domain ISU60_18060 PF01281 Ribosomal protein L9, N-terminal domain ISU60_18065 PF01084 Ribosomal protein S18 ISU60_18070 PF00436 Single-strand binding protein family ISU60_18075 PF01250 Ribosomal protein S6 ISU60_18080 PF00326 Prolyl oligopeptidase family ISU60_18085 PF02796 Helix-turn-helix domain of resolvase ISU60_18085 PF00665 Integrase core domain ISU60_18090 PF01695 IstB-like ATP binding protein ISU60_18100 PF07338 Protein of unknown function (DUF1471) ISU60_18105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU60_18105 PF02770 Acyl-CoA dehydrogenase, middle domain ISU60_18105 PF18158 Adaptive response protein AidB N-terminal domain ISU60_18110 PF00588 SpoU rRNA Methylase family ISU60_18110 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU60_18115 PF08461 Ribonuclease R winged-helix domain ISU60_18115 PF17876 Cold shock domain ISU60_18115 PF08206 Ribonuclease B OB domain ISU60_18115 PF00773 RNB domain ISU60_18115 PF00575 S1 RNA binding domain ISU60_18120 PF02082 Transcriptional regulator ISU60_18125 PF00709 Adenylosuccinate synthetase ISU60_18130 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU60_18135 PF01145 SPFH domain / Band 7 family ISU60_18140 PF01145 SPFH domain / Band 7 family ISU60_18140 PF12221 Bacterial membrane protein N terminal ISU60_18145 PF01926 50S ribosome-binding GTPase ISU60_18145 PF13167 GTP-binding GTPase N-terminal ISU60_18145 PF16360 GTP-binding GTPase Middle Region ISU60_18150 PF17209 Hfq protein ISU60_18160 PF01119 DNA mismatch repair protein, C-terminal domain ISU60_18160 PF08676 MutL C terminal dimerisation domain ISU60_18165 PF01520 N-acetylmuramoyl-L-alanine amidase ISU60_18170 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU60_18175 PF01256 Carbohydrate kinase ISU60_18175 PF03853 YjeF-related protein N-terminus ISU60_18180 PF08331 Domain of unknown function (DUF1730) ISU60_18195 PF00929 Exonuclease ISU60_18200 PF03193 RsgA GTPase ISU60_18205 PF02666 Phosphatidylserine decarboxylase ISU60_18210 PF12795 Mechanosensitive ion channel porin domain ISU60_18210 PF00924 Mechanosensitive ion channel ISU60_18210 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU60_18215 PF00152 tRNA synthetases class II (D, K and N) ISU60_18225 PF02910 Fumarate reductase flavoprotein C-term ISU60_18225 PF00890 FAD binding domain ISU60_18230 PF13183 4Fe-4S dicluster domain ISU60_18230 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU60_18235 PF02300 Fumarate reductase subunit C ISU60_18240 PF02313 Fumarate reductase subunit D ISU60_18245 PF00893 Small Multidrug Resistance protein ISU60_18250 PF01132 Elongation factor P (EF-P) OB domain ISU60_18250 PF08207 Elongation factor P (EF-P) KOW-like domain ISU60_18250 PF09285 Elongation factor P, C-terminal ISU60_18255 PF04055 Radical SAM superfamily ISU60_18260 PF13698 Domain of unknown function (DUF4156) ISU60_18265 PF00118 TCP-1/cpn60 chaperonin family ISU60_18270 PF00166 Chaperonin 10 Kd subunit ISU60_18275 PF04186 FxsA cytoplasmic membrane protein ISU60_18280 PF00206 Lyase ISU60_18280 PF10415 Fumarase C C-terminus ISU60_18285 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU60_18290 PF03091 CutA1 divalent ion tolerance protein ISU60_18295 PF11412 Disulphide bond corrector protein DsbC ISU60_18295 PF02683 Cytochrome C biogenesis protein transmembrane region ISU60_18300 PF01568 Molydopterin dinucleotide binding domain ISU60_18300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_18300 PF00384 Molybdopterin oxidoreductase ISU60_18305 PF12800 4Fe-4S binding domain ISU60_18305 PF13247 4Fe-4S dicluster domain ISU60_18310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_18310 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU60_18310 PF13247 4Fe-4S dicluster domain ISU60_18340 PF06379 L-rhamnose-proton symport protein (RhaT) ISU60_18345 PF12833 Helix-turn-helix domain ISU60_18345 PF02311 AraC-like ligand binding domain ISU60_18350 PF12833 Helix-turn-helix domain ISU60_18350 PF02311 AraC-like ligand binding domain ISU60_18360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_18360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_18365 PF06134 L-rhamnose isomerase (RhaA) ISU60_18370 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_18375 PF00465 Iron-containing alcohol dehydrogenase ISU60_18380 PF05336 L-rhamnose mutarotase ISU60_18385 PF00436 Single-strand binding protein family ISU60_18390 PF17755 UvrA DNA-binding domain ISU60_18390 PF17760 UvrA interaction domain ISU60_18390 PF00005 ABC transporter ISU60_18395 PF04237 YjbR ISU60_18400 PF00155 Aminotransferase class I and II ISU60_18405 PF00842 Alanine racemase, C-terminal domain ISU60_18405 PF01168 Alanine racemase, N-terminal domain ISU60_18410 PF03796 DnaB-like helicase C terminal domain ISU60_18410 PF00772 DnaB-like helicase N terminal domain ISU60_18415 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_18415 PF00107 Zinc-binding dehydrogenase ISU60_18420 PF09583 Phage shock protein G (Phageshock_PspG) ISU60_18425 PF01207 Dihydrouridine synthase (Dus) ISU60_18430 PF01475 Ferric uptake regulator family ISU60_18435 PF00717 Peptidase S24-like ISU60_18435 PF01726 LexA DNA binding domain ISU60_18440 PF01219 Prokaryotic diacylglycerol kinase ISU60_18445 PF01553 Acyltransferase ISU60_18450 PF01040 UbiA prenyltransferase family ISU60_18455 PF04345 Chorismate lyase ISU60_18460 PF12951 Passenger-associated-transport-repeat ISU60_18465 PF08031 Berberine and berberine like ISU60_18465 PF01565 FAD binding domain ISU60_18480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_18485 PF13954 PapC N-terminal domain ISU60_18485 PF13953 PapC C-terminal domain ISU60_18485 PF00577 Outer membrane usher protein ISU60_18495 PF02342 TerD domain ISU60_18500 PF02342 TerD domain ISU60_18505 PF03741 Integral membrane protein TerC family ISU60_18510 PF05099 Tellurite resistance protein TerB ISU60_18515 PF02342 TerD domain ISU60_18520 PF02342 TerD domain ISU60_18540 PF11202 Phosphoribosyl transferase (PRTase) ISU60_18540 PF15608 PELOTA RNA binding domain ISU60_18560 PF04055 Radical SAM superfamily ISU60_18565 PF06228 Haem utilisation ChuX/HutX ISU60_18570 PF13460 NAD(P)H-binding ISU60_18580 PF00593 TonB dependent receptor ISU60_18580 PF07715 TonB-dependent Receptor Plug Domain ISU60_18585 PF05171 Haemin-degrading HemS.ChuX domain ISU60_18590 PF01497 Periplasmic binding protein ISU60_18595 PF01032 FecCD transport family ISU60_18600 PF00005 ABC transporter ISU60_18605 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU60_18610 PF03222 Tryptophan/tyrosine permease family ISU60_18615 PF03466 LysR substrate binding domain ISU60_18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_18620 PF01206 Sulfurtransferase TusA ISU60_18625 PF04143 Sulphur transport ISU60_18630 PF01312 FlhB HrpN YscU SpaS Family ISU60_18635 PF01311 Bacterial export proteins, family 1 ISU60_18640 PF01313 Bacterial export proteins, family 3 ISU60_18645 PF00813 FliP family ISU60_18650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_18665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_18665 PF18269 T3SS EscN ATPase C-terminal domain ISU60_18670 PF00771 FHIPEP family ISU60_18685 PF01514 Secretory protein of YscJ/FliF family ISU60_18720 PF00263 Bacterial type II and III secretion system protein ISU60_18720 PF03958 Bacterial type II/III secretion system short domain ISU60_18725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU60_18725 PF00072 Response regulator receiver domain ISU60_18725 PF01627 Hpt domain ISU60_18725 PF00512 His Kinase A (phospho-acceptor) domain ISU60_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_18725 PF00672 HAMP domain ISU60_18730 PF00196 Bacterial regulatory proteins, luxR family ISU60_18730 PF00072 Response regulator receiver domain ISU60_18735 PF00375 Sodium:dicarboxylate symporter family ISU60_18740 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU60_18740 PF13193 AMP-binding enzyme C-terminal domain ISU60_18740 PF00501 AMP-binding enzyme ISU60_18745 PF04341 Protein of unknown function, DUF485 ISU60_18750 PF00474 Sodium:solute symporter family ISU60_18760 PF02796 Helix-turn-helix domain of resolvase ISU60_18760 PF00665 Integrase core domain ISU60_18765 PF01695 IstB-like ATP binding protein ISU60_18800 PF02142 MGS-like domain ISU60_18800 PF01808 AICARFT/IMPCHase bienzyme ISU60_18805 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU60_18805 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU60_18805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU60_18810 PF07356 Protein of unknown function (DUF1481) ISU60_18815 PF00216 Bacterial DNA-binding protein ISU60_18820 PF04222 Protein of unknown function (DUF416) ISU60_18825 PF04493 Endonuclease V ISU60_18830 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU60_18840 PF00293 NUDIX domain ISU60_18840 PF09297 NADH pyrophosphatase zinc ribbon domain ISU60_18845 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU60_18850 PF13667 ThiC-associated domain ISU60_18850 PF01964 Radical SAM ThiC family ISU60_18855 PF02581 Thiamine monophosphate synthase ISU60_18860 PF00899 ThiF family ISU60_18870 PF05690 Thiazole biosynthesis protein ThiG ISU60_18875 PF06968 Biotin and Thiamin Synthesis associated domain ISU60_18875 PF04055 Radical SAM superfamily ISU60_18880 PF01797 Transposase IS200 like ISU60_18885 PF05000 RNA polymerase Rpb1, domain 4 ISU60_18885 PF04998 RNA polymerase Rpb1, domain 5 ISU60_18885 PF00623 RNA polymerase Rpb1, domain 2 ISU60_18885 PF04983 RNA polymerase Rpb1, domain 3 ISU60_18885 PF04997 RNA polymerase Rpb1, domain 1 ISU60_18890 PF04563 RNA polymerase beta subunit ISU60_18890 PF04561 RNA polymerase Rpb2, domain 2 ISU60_18890 PF10385 RNA polymerase beta subunit external 1 domain ISU60_18890 PF04565 RNA polymerase Rpb2, domain 3 ISU60_18890 PF04560 RNA polymerase Rpb2, domain 7 ISU60_18890 PF00562 RNA polymerase Rpb2, domain 6 ISU60_18895 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU60_18895 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU60_18900 PF00466 Ribosomal protein L10 ISU60_18905 PF00687 Ribosomal protein L1p/L10e family ISU60_18910 PF03946 Ribosomal protein L11, N-terminal domain ISU60_18910 PF00298 Ribosomal protein L11, RNA binding domain ISU60_18915 PF00467 KOW motif ISU60_18915 PF02357 Transcription termination factor nusG ISU60_18920 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU60_18925 PF03143 Elongation factor Tu C-terminal domain ISU60_18925 PF03144 Elongation factor Tu domain 2 ISU60_18925 PF00009 Elongation factor Tu GTP binding domain ISU60_18950 PF01695 IstB-like ATP binding protein ISU60_18955 PF00665 Integrase core domain ISU60_18955 PF02796 Helix-turn-helix domain of resolvase ISU60_18960 PF13673 Acetyltransferase (GNAT) domain ISU60_18965 PF00485 Phosphoribulokinase / Uridine kinase family ISU60_18970 PF02237 Biotin protein ligase C terminal domain ISU60_18970 PF03099 Biotin/lipoate A/B protein ligase family ISU60_18970 PF08279 HTH domain ISU60_18975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU60_18975 PF01565 FAD binding domain ISU60_19005 PF12724 Flavodoxin domain ISU60_19010 PF02386 Cation transport protein ISU60_19025 PF01205 Uncharacterized protein family UPF0029 ISU60_19025 PF09186 Domain of unknown function (DUF1949) ISU60_19030 PF00557 Metallopeptidase family M24 ISU60_19035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU60_19035 PF00378 Enoyl-CoA hydratase/isomerase ISU60_19035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU60_19040 PF02803 Thiolase, C-terminal domain ISU60_19040 PF00108 Thiolase, N-terminal domain ISU60_19045 PF00970 Oxidoreductase FAD-binding domain ISU60_19045 PF00175 Oxidoreductase NAD-binding domain ISU60_19050 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU60_19055 PF02357 Transcription termination factor nusG ISU60_19060 PF00490 Delta-aminolevulinic acid dehydratase ISU60_19065 PF01026 TatD related DNase ISU60_19070 PF01695 IstB-like ATP binding protein ISU60_19075 PF02796 Helix-turn-helix domain of resolvase ISU60_19075 PF00665 Integrase core domain ISU60_19085 PF00902 Sec-independent protein translocase protein (TatC) ISU60_19095 PF02416 mttA/Hcf106 family ISU60_19100 PF03109 ABC1 family ISU60_19105 PF02036 SCP-2 sterol transfer family ISU60_19110 PF01209 ubiE/COQ5 methyltransferase family ISU60_19115 PF02646 RmuC family ISU60_19120 PF09335 SNARE associated Golgi protein ISU60_19125 PF13722 5TM C-terminal transporter carbon starvation CstA ISU60_19125 PF02554 Carbon starvation protein CstA ISU60_19135 PF01048 Phosphorylase superfamily ISU60_19140 PF01738 Dienelactone hydrolase family ISU60_19145 PF08267 Cobalamin-independent synthase, N-terminal domain ISU60_19145 PF01717 Cobalamin-independent synthase, Catalytic domain ISU60_19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_19150 PF03466 LysR substrate binding domain ISU60_19155 PF00892 EamA-like transporter family ISU60_19160 PF03547 Membrane transport protein ISU60_19170 PF17912 MalK OB fold domain ISU60_19170 PF00005 ABC transporter ISU60_19175 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_19180 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_19185 PF13416 Bacterial extracellular solute-binding protein ISU60_19225 PF00005 ABC transporter ISU60_19230 PF00005 ABC transporter ISU60_19230 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU60_19235 PF11862 Domain of unknown function (DUF3382) ISU60_19235 PF02653 Branched-chain amino acid transport system / permease component ISU60_19240 PF02653 Branched-chain amino acid transport system / permease component ISU60_19245 PF13458 Periplasmic binding protein ISU60_19250 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU60_19255 PF01797 Transposase IS200 like ISU60_19260 PF00140 Sigma-70 factor, region 1.2 ISU60_19260 PF04545 Sigma-70, region 4 ISU60_19260 PF04542 Sigma-70 region 2 ISU60_19265 PF02687 FtsX-like permease family ISU60_19265 PF18075 FtsX extracellular domain ISU60_19270 PF00005 ABC transporter ISU60_19275 PF02881 SRP54-type protein, helical bundle domain ISU60_19275 PF02881 SRP54-type protein, helical bundle domain ISU60_19275 PF00448 SRP54-type protein, GTPase domain ISU60_19275 PF00448 SRP54-type protein, GTPase domain ISU60_19285 PF06611 Protein of unknown function (DUF1145) ISU60_19300 PF07947 YhhN family ISU60_19305 PF00403 Heavy-metal-associated domain ISU60_19310 PF01206 Sulfurtransferase TusA ISU60_19315 PF02592 Putative vitamin uptake transporter ISU60_19320 PF08786 DcrB ISU60_19325 PF13183 4Fe-4S dicluster domain ISU60_19325 PF02754 Cysteine-rich domain ISU60_19330 PF00890 FAD binding domain ISU60_19335 PF04324 BFD-like [2Fe-2S] binding domain ISU60_19335 PF01266 FAD dependent oxidoreductase ISU60_19340 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_19355 PF12146 Serine aminopeptidase, S33 ISU60_19360 PF01810 LysE type translocator ISU60_19365 PF01810 LysE type translocator ISU60_19370 PF16124 RecQ zinc-binding ISU60_19370 PF00570 HRDC domain ISU60_19370 PF00271 Helicase conserved C-terminal domain ISU60_19370 PF00270 DEAD/DEAH box helicase ISU60_19370 PF09382 RQC domain ISU60_19375 PF02253 Phospholipase A1 ISU60_19380 PF03061 Thioesterase superfamily ISU60_19385 PF00892 EamA-like transporter family ISU60_19390 PF01544 CorA-like Mg2+ transporter protein ISU60_19395 PF09370 Phosphoenolpyruvate hydrolase-like ISU60_19410 PF13361 UvrD-like helicase C-terminal domain ISU60_19410 PF00580 UvrD/REP helicase N-terminal domain ISU60_19415 PF13419 Haloacid dehalogenase-like hydrolase ISU60_19420 PF00589 Phage integrase family ISU60_19420 PF02899 Phage integrase, N-terminal SAM-like domain ISU60_19425 PF04340 Protein of unknown function, DUF484 ISU60_19430 PF01678 Diaminopimelate epimerase ISU60_19435 PF13627 Prokaryotic lipoprotein-attachment site ISU60_19440 PF01491 Frataxin-like domain ISU60_19445 PF12633 Adenylate cyclase NT domain ISU60_19445 PF01295 Adenylate cyclase, class-I ISU60_19455 PF03900 Porphobilinogen deaminase, C-terminal domain ISU60_19455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU60_19460 PF02602 Uroporphyrinogen-III synthase HemD ISU60_19465 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU60_19470 PF07219 HemY protein N-terminus ISU60_19470 PF07719 Tetratricopeptide repeat ISU60_19500 PF00324 Amino acid permease ISU60_19505 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU60_19510 PF06899 WzyE protein, O-antigen assembly polymerase ISU60_19515 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU60_19520 PF01943 Polysaccharide biosynthesis protein ISU60_19525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU60_19535 PF00483 Nucleotidyl transferase ISU60_19540 PF16363 GDP-mannose 4,6 dehydratase ISU60_19545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU60_19545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU60_19545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU60_19550 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU60_19555 PF02706 Chain length determinant protein ISU60_19560 PF00953 Glycosyl transferase family 4 ISU60_19565 PF07498 Rho termination factor, N-terminal domain ISU60_19565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_19565 PF07497 Rho termination factor, RNA-binding domain ISU60_19570 PF00085 Thioredoxin ISU60_19575 PF00271 Helicase conserved C-terminal domain ISU60_19575 PF00270 DEAD/DEAH box helicase ISU60_19585 PF00580 UvrD/REP helicase N-terminal domain ISU60_19585 PF13361 UvrD-like helicase C-terminal domain ISU60_19605 PF00872 Transposase, Mutator family ISU60_19615 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_19615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_19620 PF00577 Outer membrane usher protein ISU60_19620 PF13954 PapC N-terminal domain ISU60_19620 PF13953 PapC C-terminal domain ISU60_19630 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_19630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_19635 PF01320 Colicin immunity protein / pyocin immunity protein ISU60_19660 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU60_19660 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU60_19665 PF03466 LysR substrate binding domain ISU60_19665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_19700 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_19700 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU60_19705 PF00920 Dehydratase family ISU60_19710 PF01063 Amino-transferase class IV ISU60_19720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_19720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_19720 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_19725 PF08046 IlvGEDA operon leader peptide ISU60_19730 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU60_19730 PF01078 Magnesium chelatase, subunit ChlI ISU60_19735 PF04219 Protein of unknown function, DUF ISU60_19740 PF03466 LysR substrate binding domain ISU60_19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_19745 PF02653 Branched-chain amino acid transport system / permease component ISU60_19750 PF02653 Branched-chain amino acid transport system / permease component ISU60_19755 PF00005 ABC transporter ISU60_19760 PF13407 Periplasmic binding protein domain ISU60_19795 PF01177 Asp/Glu/Hydantoin racemase ISU60_19800 PF07715 TonB-dependent Receptor Plug Domain ISU60_19800 PF00593 TonB dependent receptor ISU60_19805 PF05958 tRNA (Uracil-5-)-methyltransferase ISU60_19810 PF07226 Protein of unknown function (DUF1422) ISU60_19815 PF00440 Bacterial regulatory proteins, tetR family ISU60_19820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_19820 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_19825 PF03466 LysR substrate binding domain ISU60_19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_19830 PF00462 Glutaredoxin ISU60_19830 PF08534 Redoxin ISU60_19835 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_19835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_19840 PF03544 Gram-negative bacterial TonB protein C-terminal ISU60_19845 PF00529 HlyD membrane-fusion protein of T1SS ISU60_19850 PF00664 ABC transporter transmembrane region ISU60_19850 PF00005 ABC transporter ISU60_19860 PF07715 TonB-dependent Receptor Plug Domain ISU60_19860 PF00593 TonB dependent receptor ISU60_19865 PF00206 Lyase ISU60_19865 PF14698 Argininosuccinate lyase C-terminal ISU60_19870 PF00696 Amino acid kinase family ISU60_19875 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU60_19875 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU60_19880 PF01546 Peptidase family M20/M25/M40 ISU60_19880 PF07687 Peptidase dimerisation domain ISU60_19885 PF00311 Phosphoenolpyruvate carboxylase ISU60_19895 PF02219 Methylenetetrahydrofolate reductase ISU60_19900 PF03447 Homoserine dehydrogenase, NAD binding domain ISU60_19900 PF00742 Homoserine dehydrogenase ISU60_19900 PF00696 Amino acid kinase family ISU60_19910 PF01340 Met Apo-repressor, MetJ ISU60_19915 PF05360 yiaA/B two helix domain ISU60_19920 PF01197 Ribosomal protein L31 ISU60_19925 PF18074 Primosomal protein N C-terminal domain ISU60_19925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU60_19925 PF17764 3′ DNA-binding domain (3′BD) ISU60_19925 PF00270 DEAD/DEAH box helicase ISU60_19925 PF00271 Helicase conserved C-terminal domain ISU60_19930 PF00356 Bacterial regulatory proteins, lacI family ISU60_19935 PF05036 Sporulation related domain ISU60_19940 PF00227 Proteasome subunit ISU60_19945 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_19945 PF07724 AAA domain (Cdc48 subfamily) ISU60_19945 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_19950 PF01040 UbiA prenyltransferase family ISU60_19955 PF03737 Aldolase/RraA ISU60_19970 PF00529 HlyD membrane-fusion protein of T1SS ISU60_19970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_19975 PF00664 ABC transporter transmembrane region ISU60_19975 PF00005 ABC transporter ISU60_19975 PF03412 Peptidase C39 family ISU60_19985 PF06005 Cell division protein ZapB ISU60_19990 PF00230 Major intrinsic protein ISU60_19995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_19995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_20000 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU60_20005 PF00175 Oxidoreductase NAD-binding domain ISU60_20005 PF00970 Oxidoreductase FAD-binding domain ISU60_20010 PF05656 Protein of unknown function (DUF805) ISU60_20015 PF07305 Protein of unknown function (DUF1454) ISU60_20020 PF00121 Triosephosphate isomerase ISU60_20025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_20025 PF03466 LysR substrate binding domain ISU60_20030 PF02585 GlcNAc-PI de-N-acetylase ISU60_20035 PF03737 Aldolase/RraA ISU60_20040 PF00939 Sodium:sulfate symporter transmembrane region ISU60_20055 PF00365 Phosphofructokinase ISU60_20060 PF16916 Dimerisation domain of Zinc Transporter ISU60_20060 PF01545 Cation efflux family ISU60_20065 PF04754 Putative transposase, YhgA-like ISU60_20075 PF07813 LTXXQ motif family protein ISU60_20080 PF00072 Response regulator receiver domain ISU60_20080 PF00486 Transcriptional regulatory protein, C terminal ISU60_20085 PF00512 His Kinase A (phospho-acceptor) domain ISU60_20085 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU60_20085 PF00672 HAMP domain ISU60_20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_20090 PF12833 Helix-turn-helix domain ISU60_20090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU60_20090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU60_20090 PF02805 Metal binding domain of Ada ISU60_20095 PF00588 SpoU rRNA Methylase family ISU60_20100 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_20100 PF06426 Serine acetyltransferase, N-terminal ISU60_20105 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU60_20105 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU60_20110 PF02556 Preprotein translocase subunit SecB ISU60_20115 PF00462 Glutaredoxin ISU60_20120 PF00581 Rhodanese-like domain ISU60_20125 PF01676 Metalloenzyme superfamily ISU60_20125 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU60_20130 PF01551 Peptidase family M23 ISU60_20140 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_20140 PF00107 Zinc-binding dehydrogenase ISU60_20145 PF00155 Aminotransferase class I and II ISU60_20150 PF01370 NAD dependent epimerase/dehydratase family ISU60_20155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU60_20160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU60_20165 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU60_20170 PF00535 Glycosyl transferase family 2 ISU60_20175 PF01467 Cytidylyltransferase-like ISU60_20180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU60_20180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU60_20180 PF06827 Zinc finger found in FPG and IleRS ISU60_20185 PF00471 Ribosomal protein L33 ISU60_20190 PF00830 Ribosomal L28 family ISU60_20195 PF04002 RadC-like JAB domain ISU60_20200 PF04127 DNA / pantothenate metabolism flavoprotein ISU60_20200 PF02441 Flavoprotein ISU60_20205 PF00692 dUTPase ISU60_20210 PF00440 Bacterial regulatory proteins, tetR family ISU60_20215 PF00156 Phosphoribosyl transferase domain ISU60_20220 PF03725 3' exoribonuclease family, domain 2 ISU60_20220 PF01138 3' exoribonuclease family, domain 1 ISU60_20225 PF08340 Domain of unknown function (DUF1732) ISU60_20225 PF03755 YicC-like family, N-terminal region ISU60_20230 PF03458 UPF0126 domain ISU60_20235 PF01653 NAD-dependent DNA ligase adenylation domain ISU60_20235 PF03120 NAD-dependent DNA ligase OB-fold domain ISU60_20240 PF00625 Guanylate kinase ISU60_20245 PF01192 RNA polymerase Rpb6 ISU60_20250 PF02824 TGS domain ISU60_20250 PF13291 ACT domain ISU60_20250 PF04607 Region found in RelA / SpoT proteins ISU60_20255 PF12105 SpoU, rRNA methylase, C-terminal ISU60_20255 PF00588 SpoU rRNA Methylase family ISU60_20260 PF00271 Helicase conserved C-terminal domain ISU60_20260 PF17191 RecG wedge domain ISU60_20260 PF00270 DEAD/DEAH box helicase ISU60_20270 PF03616 Sodium/glutamate symporter ISU60_20275 PF00860 Permease family ISU60_20280 PF05170 AsmA family ISU60_20285 PF09500 Putative thioesterase (yiiD_Cterm) ISU60_20285 PF00583 Acetyltransferase (GNAT) family ISU60_20290 PF02796 Helix-turn-helix domain of resolvase ISU60_20290 PF00665 Integrase core domain ISU60_20295 PF01695 IstB-like ATP binding protein ISU60_20300 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU60_20305 PF03631 Virulence factor BrkB ISU60_20310 PF13419 Haloacid dehalogenase-like hydrolase ISU60_20315 PF00009 Elongation factor Tu GTP binding domain ISU60_20315 PF00679 Elongation factor G C-terminus ISU60_20315 PF03144 Elongation factor Tu domain 2 ISU60_20320 PF03951 Glutamine synthetase, beta-Grasp domain ISU60_20320 PF00120 Glutamine synthetase, catalytic domain ISU60_20325 PF00989 PAS fold ISU60_20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_20325 PF00512 His Kinase A (phospho-acceptor) domain ISU60_20330 PF00072 Response regulator receiver domain ISU60_20330 PF02954 Bacterial regulatory protein, Fis family ISU60_20330 PF00158 Sigma-54 interaction domain ISU60_20335 PF06969 HemN C-terminal domain ISU60_20335 PF04055 Radical SAM superfamily ISU60_20340 PF04220 Der GTPase activator (YihI) ISU60_20345 PF01926 50S ribosome-binding GTPase ISU60_20350 PF01797 Transposase IS200 like ISU60_20355 PF00476 DNA polymerase family A ISU60_20355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU60_20355 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU60_20355 PF01612 3'-5' exonuclease ISU60_20360 PF01323 DSBA-like thioredoxin domain ISU60_20365 PF01636 Phosphotransferase enzyme family ISU60_20370 PF06288 Protein of unknown function (DUF1040) ISU60_20375 PF12804 MobA-like NTP transferase domain ISU60_20380 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU60_20385 PF00872 Transposase, Mutator family ISU60_20410 PF07729 FCD domain ISU60_20410 PF00392 Bacterial regulatory proteins, gntR family ISU60_20415 PF07690 Major Facilitator Superfamily ISU60_20430 PF00294 pfkB family carbohydrate kinase ISU60_20435 PF05025 RbsD / FucU transport protein family ISU60_20440 PF02705 K+ potassium transporter ISU60_20445 PF17868 AAA lid domain ISU60_20445 PF07728 AAA domain (dynein-related subfamily) ISU60_20445 PF12592 Protein of unknown function (DUF3763) ISU60_20450 PF05762 VWA domain containing CoxE-like protein ISU60_20455 PF03590 Aspartate-ammonia ligase ISU60_20460 PF01037 Lrp/AsnC ligand binding domain ISU60_20465 PF00258 Flavodoxin ISU60_20470 PF13932 GidA associated domain ISU60_20470 PF01134 Glucose inhibited division protein A ISU60_20475 PF02527 rRNA small subunit methyltransferase G ISU60_20480 PF03899 ATP synthase I chain ISU60_20485 PF00119 ATP synthase A chain ISU60_20490 PF00137 ATP synthase subunit C ISU60_20495 PF00430 ATP synthase B/B' CF(0) ISU60_20500 PF00213 ATP synthase delta (OSCP) subunit ISU60_20505 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU60_20505 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU60_20505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_20510 PF00231 ATP synthase ISU60_20515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_20515 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU60_20520 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU60_20520 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU60_20525 PF12804 MobA-like NTP transferase domain ISU60_20525 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_20530 PF01380 SIS domain ISU60_20535 PF12849 PBP superfamily domain ISU60_20540 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_20545 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_20550 PF00005 ABC transporter ISU60_20555 PF01895 PhoU domain ISU60_20565 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_20570 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_20575 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_20580 PF13419 Haloacid dehalogenase-like hydrolase ISU60_20590 PF00860 Permease family ISU60_20610 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU60_20610 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU60_20610 PF07055 Enoyl reductase FAD binding domain ISU60_20615 PF10396 GTP-binding protein TrmE N-terminus ISU60_20615 PF12631 MnmE helical domain ISU60_20615 PF01926 50S ribosome-binding GTPase ISU60_20620 PF02096 60Kd inner membrane protein ISU60_20620 PF14849 YidC periplasmic domain ISU60_20625 PF01809 Putative membrane protein insertion efficiency factor ISU60_20630 PF00825 Ribonuclease P ISU60_20635 PF00468 Ribosomal protein L34