locus-tag class description ISU62_00005 PF00308 Bacterial dnaA protein ISU62_00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU62_00005 PF11638 DnaA N-terminal domain ISU62_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU62_00010 PF02767 DNA polymerase III beta subunit, central domain ISU62_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU62_00020 PF02463 RecF/RecN/SMC N terminal domain ISU62_00025 PF00204 DNA gyrase B ISU62_00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU62_00025 PF18053 DNA gyrase B subunit insert domain ISU62_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_00025 PF01751 Toprim domain ISU62_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU62_00045 PF13291 ACT domain ISU62_00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_00055 PF07119 Protein of unknown function (DUF1375) ISU62_00060 PF00011 Hsp20/alpha crystallin family ISU62_00065 PF00011 Hsp20/alpha crystallin family ISU62_00070 PF06826 Predicted Permease Membrane Region ISU62_00070 PF02080 TrkA-C domain ISU62_00075 PF00155 Aminotransferase class I and II ISU62_00085 PF00128 Alpha amylase, catalytic domain ISU62_00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU62_00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU62_00100 PF00691 OmpA family ISU62_00100 PF13488 Glycine zipper ISU62_00110 PF03352 Methyladenine glycosylase ISU62_00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU62_00120 PF05746 DALR anticodon binding domain ISU62_00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU62_00130 PF11254 Protein of unknown function (DUF3053) ISU62_00135 PF02378 Phosphotransferase system, EIIC ISU62_00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU62_00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU62_00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU62_00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU62_00145 PF05068 Mannitol repressor ISU62_00150 PF10928 Protein of unknown function (DUF2810) ISU62_00165 PF00672 HAMP domain ISU62_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU62_00165 PF02203 Tar ligand binding domain homologue ISU62_00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU62_00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU62_00175 PF02634 FdhD/NarQ family ISU62_00185 PF13247 4Fe-4S dicluster domain ISU62_00185 PF09163 Formate dehydrogenase N, transmembrane ISU62_00190 PF01292 Prokaryotic cytochrome b561 ISU62_00195 PF04216 Protein involved in formate dehydrogenase formation ISU62_00200 PF12390 Selenocysteine synthase N terminal ISU62_00200 PF03841 L-seryl-tRNA selenium transferase ISU62_00205 PF09107 Elongation factor SelB, winged helix ISU62_00205 PF09106 Elongation factor SelB, winged helix ISU62_00205 PF00009 Elongation factor Tu GTP binding domain ISU62_00205 PF03144 Elongation factor Tu domain 2 ISU62_00235 PF07690 Major Facilitator Superfamily ISU62_00245 PF00455 DeoR C terminal sensor domain ISU62_00245 PF08220 DeoR-like helix-turn-helix domain ISU62_00250 PF01694 Rhomboid family ISU62_00250 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU62_00255 PF00581 Rhodanese-like domain ISU62_00260 PF00196 Bacterial regulatory proteins, luxR family ISU62_00260 PF17874 MalT-like TPR region ISU62_00265 PF00343 Carbohydrate phosphorylase ISU62_00270 PF00343 Carbohydrate phosphorylase ISU62_00275 PF02446 4-alpha-glucanotransferase ISU62_00280 PF01521 Iron-sulphur cluster biosynthesis ISU62_00280 PF01106 NifU-like domain ISU62_00285 PF00156 Phosphoribosyl transferase domain ISU62_00290 PF00561 alpha/beta hydrolase fold ISU62_00295 PF07338 Protein of unknown function (DUF1471) ISU62_00300 PF09012 FeoC like transcriptional regulator ISU62_00305 PF02421 Ferrous iron transport protein B ISU62_00305 PF07670 Nucleoside recognition ISU62_00305 PF07664 Ferrous iron transport protein B C terminus ISU62_00305 PF17910 FeoB cytosolic helical domain ISU62_00310 PF04023 FeoA domain ISU62_00315 PF17674 HHH domain ISU62_00315 PF00575 S1 RNA binding domain ISU62_00315 PF09371 Tex-like protein N-terminal domain ISU62_00315 PF16921 Tex protein YqgF-like domain ISU62_00320 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU62_00320 PF03449 Transcription elongation factor, N-terminal ISU62_00325 PF00072 Response regulator receiver domain ISU62_00325 PF00486 Transcriptional regulatory protein, C terminal ISU62_00330 PF00512 His Kinase A (phospho-acceptor) domain ISU62_00330 PF00672 HAMP domain ISU62_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_00335 PF01293 Phosphoenolpyruvate carboxykinase ISU62_00340 PF01430 Hsp33 protein ISU62_00345 PF01479 S4 domain ISU62_00350 PF13419 Haloacid dehalogenase-like hydrolase ISU62_00355 PF07095 Intracellular growth attenuator protein IgaA ISU62_00360 PF00293 NUDIX domain ISU62_00365 PF17092 Penicillin-binding protein OB-like domain ISU62_00365 PF00912 Transglycosylase ISU62_00365 PF00905 Penicillin binding protein transpeptidase domain ISU62_00390 PF00263 Bacterial type II and III secretion system protein ISU62_00390 PF03958 Bacterial type II/III secretion system short domain ISU62_00395 PF01202 Shikimate kinase ISU62_00400 PF01761 3-dehydroquinate synthase ISU62_00405 PF05036 Sporulation related domain ISU62_00410 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU62_00415 PF00834 Ribulose-phosphate 3 epimerase family ISU62_00420 PF13419 Haloacid dehalogenase-like hydrolase ISU62_00425 PF00579 tRNA synthetases class I (W and Y) ISU62_00430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU62_00430 PF14824 Sirohaem biosynthesis protein central ISU62_00430 PF10414 Sirohaem synthase dimerisation region ISU62_00435 PF01226 Formate/nitrite transporter ISU62_00440 PF13806 Rieske-like [2Fe-2S] domain ISU62_00445 PF04324 BFD-like [2Fe-2S] binding domain ISU62_00445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU62_00445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU62_00445 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_00445 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU62_00450 PF07969 Amidohydrolase family ISU62_00455 PF07690 Major Facilitator Superfamily ISU62_00465 PF00356 Bacterial regulatory proteins, lacI family ISU62_00470 PF02056 Family 4 glycosyl hydrolase ISU62_00470 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU62_00475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU62_00480 PF05872 Bacterial protein of unknown function (DUF853) ISU62_00485 PF00117 Glutamine amidotransferase class-I ISU62_00490 PF00202 Aminotransferase class-III ISU62_00495 PF12805 FUSC-like inner membrane protein yccS ISU62_00500 PF00027 Cyclic nucleotide-binding domain ISU62_00500 PF13545 Crp-like helix-turn-helix domain ISU62_00505 PF02566 OsmC-like protein ISU62_00515 PF00485 Phosphoribulokinase / Uridine kinase family ISU62_00520 PF06794 Uncharacterised protein family (UPF0270) ISU62_00525 PF00561 alpha/beta hydrolase fold ISU62_00530 PF01810 LysE type translocator ISU62_00535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU62_00540 PF00005 ABC transporter ISU62_00545 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_00550 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU62_00560 PF00535 Glycosyl transferase family 2 ISU62_00570 PF02525 Flavodoxin-like fold ISU62_00575 PF00999 Sodium/hydrogen exchanger family ISU62_00575 PF02254 TrkA-N domain ISU62_00580 PF09526 Probable metal-binding protein (DUF2387) ISU62_00585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU62_00590 PF04102 SlyX ISU62_00595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU62_00595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU62_00600 PF08348 YheO-like PAS domain ISU62_00600 PF13309 HTH domain ISU62_00605 PF02635 DsrE/DsrF-like family ISU62_00610 PF02635 DsrE/DsrF-like family ISU62_00615 PF04077 DsrH like protein ISU62_00620 PF00164 Ribosomal protein S12/S23 ISU62_00625 PF00177 Ribosomal protein S7p/S5e ISU62_00630 PF00679 Elongation factor G C-terminus ISU62_00630 PF14492 Elongation Factor G, domain II ISU62_00630 PF03764 Elongation factor G, domain IV ISU62_00630 PF00009 Elongation factor Tu GTP binding domain ISU62_00630 PF03144 Elongation factor Tu domain 2 ISU62_00635 PF03144 Elongation factor Tu domain 2 ISU62_00635 PF00009 Elongation factor Tu GTP binding domain ISU62_00635 PF03143 Elongation factor Tu C-terminal domain ISU62_00640 PF01797 Transposase IS200 like ISU62_00645 PF00665 Integrase core domain ISU62_00645 PF02796 Helix-turn-helix domain of resolvase ISU62_00650 PF01695 IstB-like ATP binding protein ISU62_00655 PF04324 BFD-like [2Fe-2S] binding domain ISU62_00660 PF00210 Ferritin-like domain ISU62_00665 PF00338 Ribosomal protein S10p/S20e ISU62_00670 PF00297 Ribosomal protein L3 ISU62_00675 PF00573 Ribosomal protein L4/L1 family ISU62_00680 PF00276 Ribosomal protein L23 ISU62_00685 PF03947 Ribosomal Proteins L2, C-terminal domain ISU62_00685 PF00181 Ribosomal Proteins L2, RNA binding domain ISU62_00690 PF00203 Ribosomal protein S19 ISU62_00695 PF00237 Ribosomal protein L22p/L17e ISU62_00700 PF00189 Ribosomal protein S3, C-terminal domain ISU62_00700 PF07650 KH domain ISU62_00705 PF00252 Ribosomal protein L16p/L10e ISU62_00710 PF00831 Ribosomal L29 protein ISU62_00715 PF00366 Ribosomal protein S17 ISU62_00720 PF00238 Ribosomal protein L14p/L23e ISU62_00725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU62_00725 PF00467 KOW motif ISU62_00730 PF00673 ribosomal L5P family C-terminus ISU62_00730 PF00281 Ribosomal protein L5 ISU62_00735 PF00253 Ribosomal protein S14p/S29e ISU62_00740 PF00410 Ribosomal protein S8 ISU62_00745 PF00347 Ribosomal protein L6 ISU62_00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU62_00755 PF00333 Ribosomal protein S5, N-terminal domain ISU62_00755 PF03719 Ribosomal protein S5, C-terminal domain ISU62_00760 PF00327 Ribosomal protein L30p/L7e ISU62_00765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU62_00770 PF00344 SecY translocase ISU62_00775 PF00444 Ribosomal protein L36 ISU62_00780 PF00416 Ribosomal protein S13/S18 ISU62_00785 PF00411 Ribosomal protein S11 ISU62_00790 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU62_00790 PF01479 S4 domain ISU62_00795 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU62_00795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU62_00795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU62_00800 PF01196 Ribosomal protein L17 ISU62_00805 PF13411 MerR HTH family regulatory protein ISU62_00810 PF03889 Alternative ribosome-rescue factor A ISU62_00815 PF01741 Large-conductance mechanosensitive channel, MscL ISU62_00820 PF02080 TrkA-C domain ISU62_00820 PF02254 TrkA-N domain ISU62_00825 PF01029 NusB family ISU62_00825 PF01189 16S rRNA methyltransferase RsmB/F ISU62_00830 PF02911 Formyl transferase, C-terminal domain ISU62_00830 PF00551 Formyl transferase ISU62_00835 PF01327 Polypeptide deformylase ISU62_00840 PF02481 DNA recombination-mediator protein A ISU62_00840 PF17782 DprA winged helix domain ISU62_00845 PF04361 Protein of unknown function (DUF494) ISU62_00850 PF01396 Topoisomerase DNA binding C4 zinc finger ISU62_00855 PF01300 Telomere recombination ISU62_00860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU62_00860 PF08501 Shikimate dehydrogenase substrate binding domain ISU62_00860 PF01488 Shikimate / quinate 5-dehydrogenase ISU62_00865 PF00132 Bacterial transferase hexapeptide (six repeats) ISU62_00870 PF01695 IstB-like ATP binding protein ISU62_00875 PF00665 Integrase core domain ISU62_00875 PF02796 Helix-turn-helix domain of resolvase ISU62_00910 PF04204 Homoserine O-succinyltransferase ISU62_00915 PF01274 Malate synthase ISU62_00920 PF00463 Isocitrate lyase family ISU62_00925 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU62_00935 PF02310 B12 binding domain ISU62_00935 PF02574 Homocysteine S-methyltransferase ISU62_00935 PF00809 Pterin binding enzyme ISU62_00935 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISU62_00935 PF02607 B12 binding domain ISU62_00940 PF05860 haemagglutination activity domain ISU62_00940 PF13332 Hemagglutinin repeat ISU62_00950 PF00696 Amino acid kinase family ISU62_00950 PF01842 ACT domain ISU62_00955 PF00342 Phosphoglucose isomerase ISU62_00960 PF06146 Phosphate-starvation-inducible E ISU62_00965 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_00970 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_00970 PF14785 Maltose transport system permease protein MalF P2 domain ISU62_00975 PF01547 Bacterial extracellular solute-binding protein ISU62_00985 PF00005 ABC transporter ISU62_00985 PF17912 MalK OB fold domain ISU62_00990 PF02264 LamB porin ISU62_00995 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU62_01005 PF05638 Type VI secretion system effector, Hcp ISU62_01015 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU62_01055 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU62_01065 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_01065 PF07724 AAA domain (Cdc48 subfamily) ISU62_01065 PF17871 AAA lid domain ISU62_01065 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_01100 PF04717 Type VI secretion system, phage-baseplate injector ISU62_01115 PF03527 RHS protein ISU62_01115 PF05593 RHS Repeat ISU62_01145 PF04717 Type VI secretion system, phage-baseplate injector ISU62_01175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU62_01175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU62_01180 PF02311 AraC-like ligand binding domain ISU62_01180 PF12833 Helix-turn-helix domain ISU62_01185 PF05025 RbsD / FucU transport protein family ISU62_01190 PF00294 pfkB family carbohydrate kinase ISU62_01195 PF01791 DeoC/LacD family aldolase ISU62_01200 PF03358 NADPH-dependent FMN reductase ISU62_01205 PF09084 NMT1/THI5 like ISU62_01210 PF00296 Luciferase-like monooxygenase ISU62_01215 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_01220 PF00005 ABC transporter ISU62_01230 PF04221 RelB antitoxin ISU62_01235 PF00860 Permease family ISU62_01240 PF00999 Sodium/hydrogen exchanger family ISU62_01250 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU62_01260 PF00005 ABC transporter ISU62_01265 PF02653 Branched-chain amino acid transport system / permease component ISU62_01275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_01275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_01280 PF00571 CBS domain ISU62_01280 PF01380 SIS domain ISU62_01285 PF02798 Glutathione S-transferase, N-terminal domain ISU62_01305 PF00313 'Cold-shock' DNA-binding domain ISU62_01310 PF00313 'Cold-shock' DNA-binding domain ISU62_01315 PF05433 Glycine zipper 2TM domain ISU62_01320 PF00753 Metallo-beta-lactamase superfamily ISU62_01325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU62_01325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU62_01330 PF02627 Carboxymuconolactone decarboxylase family ISU62_01335 PF07690 Major Facilitator Superfamily ISU62_01360 PF02954 Bacterial regulatory protein, Fis family ISU62_01365 PF01207 Dihydrouridine synthase (Dus) ISU62_01375 PF00474 Sodium:solute symporter family ISU62_01380 PF06196 Protein of unknown function (DUF997) ISU62_01390 PF02785 Biotin carboxylase C-terminal domain ISU62_01390 PF00289 Biotin carboxylase, N-terminal domain ISU62_01390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU62_01395 PF00364 Biotin-requiring enzyme ISU62_01400 PF01220 Dehydroquinase class II ISU62_01405 PF01794 Ferric reductase like transmembrane component ISU62_01410 PF00174 Oxidoreductase molybdopterin binding domain ISU62_01415 PF08240 Alcohol dehydrogenase GroES-like domain ISU62_01415 PF00107 Zinc-binding dehydrogenase ISU62_01420 PF00563 EAL domain ISU62_01420 PF17157 Gammaproteobacterial periplasmic sensor domain ISU62_01420 PF00990 Diguanylate cyclase, GGDEF domain ISU62_01430 PF04085 rod shape-determining protein MreC ISU62_01435 PF04093 rod shape-determining protein MreD ISU62_01440 PF02545 Maf-like protein ISU62_01445 PF00575 S1 RNA binding domain ISU62_01445 PF10150 Ribonuclease E/G family ISU62_01450 PF13116 Protein of unknown function ISU62_01450 PF13502 AsmA-like C-terminal region ISU62_01455 PF00795 Carbon-nitrogen hydrolase ISU62_01460 PF01523 Putative modulator of DNA gyrase ISU62_01465 PF14431 YwqJ-like deaminase ISU62_01465 PF18807 Tripartite Tc toxins repeat ISU62_01470 PF18807 Tripartite Tc toxins repeat ISU62_01470 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU62_01490 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU62_01490 PF03534 Salmonella virulence plasmid 65kDa B protein ISU62_01490 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU62_01495 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU62_01495 PF18413 Neuraminidase-like domain ISU62_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_01505 PF03466 LysR substrate binding domain ISU62_01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_01510 PF03466 LysR substrate binding domain ISU62_01515 PF07869 Protein of unknown function (DUF1656) ISU62_01520 PF13533 Biotin-lipoyl like ISU62_01525 PF04632 Fusaric acid resistance protein family ISU62_01540 PF01337 Barstar (barnase inhibitor) ISU62_01545 PF04751 Protein of unknown function (DUF615) ISU62_01550 PF01523 Putative modulator of DNA gyrase ISU62_01560 PF07361 Cytochrome b562 ISU62_01565 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU62_01565 PF14760 Rnk N-terminus ISU62_01570 PF00128 Alpha amylase, catalytic domain ISU62_01570 PF11941 Domain of unknown function (DUF3459) ISU62_01575 PF00367 phosphotransferase system, EIIB ISU62_01575 PF02378 Phosphotransferase system, EIIC ISU62_01580 PF00356 Bacterial regulatory proteins, lacI family ISU62_01590 PF01042 Endoribonuclease L-PSP ISU62_01595 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU62_01595 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU62_01600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU62_01600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU62_01605 PF00381 PTS HPr component phosphorylation site ISU62_01610 PF03668 P-loop ATPase protein family ISU62_01615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU62_01625 PF04552 Sigma-54, DNA binding domain ISU62_01625 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU62_01625 PF04963 Sigma-54 factor, core binding domain ISU62_01630 PF00005 ABC transporter ISU62_01630 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU62_01635 PF03968 OstA-like protein ISU62_01640 PF06835 Lipopolysaccharide-assembly, LptC-related ISU62_01650 PF00571 CBS domain ISU62_01650 PF01380 SIS domain ISU62_01655 PF01699 Sodium/calcium exchanger protein ISU62_01660 PF00005 ABC transporter ISU62_01665 PF02405 Permease MlaE ISU62_01670 PF02470 MlaD protein ISU62_01675 PF05494 MlaC protein ISU62_01680 PF13466 STAS domain ISU62_01685 PF01722 BolA-like protein ISU62_01690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU62_01695 PF13180 PDZ domain ISU62_01700 PF01797 Transposase IS200 like ISU62_01705 PF00595 PDZ domain ISU62_01705 PF13180 PDZ domain ISU62_01710 PF06295 Protein of unknown function (DUF1043) ISU62_01715 PF03969 AFG1-like ATPase ISU62_01720 PF00572 Ribosomal protein L13 ISU62_01725 PF00380 Ribosomal protein S9/S16 ISU62_01735 PF00043 Glutathione S-transferase, C-terminal domain ISU62_01735 PF02798 Glutathione S-transferase, N-terminal domain ISU62_01740 PF04386 Stringent starvation protein B ISU62_01750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU62_01750 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_01755 PF01645 Conserved region in glutamate synthase ISU62_01755 PF01493 GXGXG motif ISU62_01755 PF04898 Glutamate synthase central domain ISU62_01755 PF00310 Glutamine amidotransferases class-II ISU62_01760 PF16199 Radical_SAM C-terminal domain ISU62_01760 PF04055 Radical SAM superfamily ISU62_01765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_01765 PF00512 His Kinase A (phospho-acceptor) domain ISU62_01765 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU62_01765 PF01627 Hpt domain ISU62_01765 PF00989 PAS fold ISU62_01765 PF00072 Response regulator receiver domain ISU62_01775 PF00912 Transglycosylase ISU62_01780 PF04972 BON domain ISU62_01785 PF13580 SIS domain ISU62_01790 PF02021 Uncharacterised protein family UPF0102 ISU62_01800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU62_01810 PF02678 Pirin ISU62_01810 PF17954 Quercetinase C-terminal cupin domain ISU62_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_01815 PF03466 LysR substrate binding domain ISU62_01825 PF01695 IstB-like ATP binding protein ISU62_01830 PF02796 Helix-turn-helix domain of resolvase ISU62_01830 PF00665 Integrase core domain ISU62_01835 PF07728 AAA domain (dynein-related subfamily) ISU62_01835 PF12102 Domain of unknown function (DUF3578) ISU62_01850 PF01555 DNA methylase ISU62_01890 PF05987 Bacterial protein of unknown function (DUF898) ISU62_01900 PF12833 Helix-turn-helix domain ISU62_01905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU62_01910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU62_01920 PF05524 PEP-utilising enzyme, N-terminal ISU62_01920 PF00391 PEP-utilising enzyme, mobile domain ISU62_01920 PF02896 PEP-utilising enzyme, TIM barrel domain ISU62_01920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU62_01920 PF00381 PTS HPr component phosphorylation site ISU62_01925 PF10696 Protein of unknown function (DUF2501) ISU62_01930 PF03992 Antibiotic biosynthesis monooxygenase ISU62_01935 PF01791 DeoC/LacD family aldolase ISU62_01940 PF13407 Periplasmic binding protein domain ISU62_01945 PF02653 Branched-chain amino acid transport system / permease component ISU62_01950 PF02653 Branched-chain amino acid transport system / permease component ISU62_01955 PF00005 ABC transporter ISU62_01970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_01970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_01975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU62_01990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_01995 PF00873 AcrB/AcrD/AcrF family ISU62_02010 PF01095 Pectinesterase ISU62_02015 PF00990 Diguanylate cyclase, GGDEF domain ISU62_02020 PF07256 Protein of unknown function (DUF1435) ISU62_02030 PF05175 Methyltransferase small domain ISU62_02030 PF08468 Methyltransferase small domain N-terminal ISU62_02035 PF03603 DNA polymerase III psi subunit ISU62_02040 PF00583 Acetyltransferase (GNAT) family ISU62_02045 PF00009 Elongation factor Tu GTP binding domain ISU62_02045 PF03144 Elongation factor Tu domain 2 ISU62_02045 PF16658 Class II release factor RF3, C-terminal domain ISU62_02050 PF04972 BON domain ISU62_02055 PF07043 Protein of unknown function (DUF1328) ISU62_02060 PF01734 Patatin-like phospholipase ISU62_02065 PF01026 TatD related DNase ISU62_02075 PF01791 DeoC/LacD family aldolase ISU62_02085 PF01676 Metalloenzyme superfamily ISU62_02090 PF01048 Phosphorylase superfamily ISU62_02095 PF10144 Bacterial virulence factor haemolysin ISU62_02100 PF18429 Domain of unknown function (DUF5609) ISU62_02105 PF18073 Rubredoxin metal binding domain ISU62_02110 PF13521 AAA domain ISU62_02110 PF01381 Helix-turn-helix ISU62_02115 PF02661 Fic/DOC family ISU62_02125 PF00691 OmpA family ISU62_02130 PF17152 Periplasmic sensor domain ISU62_02130 PF00990 Diguanylate cyclase, GGDEF domain ISU62_02140 PF00689 Cation transporting ATPase, C-terminus ISU62_02140 PF00690 Cation transporter/ATPase, N-terminus ISU62_02145 PF01464 Transglycosylase SLT domain ISU62_02145 PF14718 Soluble lytic murein transglycosylase L domain ISU62_02150 PF01371 Trp repressor protein ISU62_02155 PF01931 Protein of unknown function DUF84 ISU62_02160 PF00300 Histidine phosphatase superfamily (branch 1) ISU62_02165 PF06445 GyrI-like small molecule binding domain ISU62_02165 PF12833 Helix-turn-helix domain ISU62_02170 PF05981 CreA protein ISU62_02175 PF00486 Transcriptional regulatory protein, C terminal ISU62_02175 PF00072 Response regulator receiver domain ISU62_02180 PF08254 Threonine leader peptide ISU62_02190 PF13840 ACT domain ISU62_02190 PF00742 Homoserine dehydrogenase ISU62_02190 PF03447 Homoserine dehydrogenase, NAD binding domain ISU62_02190 PF00696 Amino acid kinase family ISU62_02190 PF01842 ACT domain ISU62_02195 PF08544 GHMP kinases C terminal ISU62_02195 PF00288 GHMP kinases N terminal domain ISU62_02200 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_02200 PF14821 Threonine synthase N terminus ISU62_02205 PF03883 Peroxide stress protein YaaA ISU62_02215 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU62_02220 PF00994 Probable molybdopterin binding domain ISU62_02225 PF07690 Major Facilitator Superfamily ISU62_02235 PF01184 GPR1/FUN34/yaaH family ISU62_02240 PF00012 Hsp70 protein ISU62_02245 PF01556 DnaJ C terminal domain ISU62_02245 PF00226 DnaJ domain ISU62_02245 PF00684 DnaJ central domain ISU62_02255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_02255 PF03466 LysR substrate binding domain ISU62_02260 PF01649 Ribosomal protein S20 ISU62_02265 PF06574 FAD synthetase ISU62_02265 PF01687 Riboflavin kinase ISU62_02270 PF00133 tRNA synthetases class I (I, L, M and V) ISU62_02270 PF06827 Zinc finger found in FPG and IleRS ISU62_02270 PF08264 Anticodon-binding domain of tRNA ISU62_02275 PF01252 Signal peptidase (SPase) II ISU62_02280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU62_02285 PF02401 LytB protein ISU62_02290 PF01797 Transposase IS200 like ISU62_02295 PF05173 Dihydrodipicolinate reductase, C-terminus ISU62_02295 PF01113 Dihydrodipicolinate reductase, N-terminus ISU62_02300 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU62_02300 PF00117 Glutamine amidotransferase class-I ISU62_02305 PF02142 MGS-like domain ISU62_02305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU62_02305 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU62_02310 PF01810 LysE type translocator ISU62_02315 PF06738 Putative threonine/serine exporter ISU62_02320 PF12821 Threonine/Serine exporter, ThrE ISU62_02325 PF00186 Dihydrofolate reductase ISU62_02330 PF01797 Transposase IS200 like ISU62_02345 PF00149 Calcineurin-like phosphoesterase ISU62_02350 PF04379 ApaG domain ISU62_02355 PF00398 Ribosomal RNA adenine dimethylase ISU62_02360 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU62_02365 PF09312 SurA N-terminal domain ISU62_02365 PF00639 PPIC-type PPIASE domain ISU62_02370 PF03968 OstA-like protein ISU62_02370 PF04453 LPS transport system D ISU62_02375 PF05099 Tellurite resistance protein TerB ISU62_02375 PF00226 DnaJ domain ISU62_02380 PF00849 RNA pseudouridylate synthase ISU62_02395 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU62_02400 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU62_02410 PF00665 Integrase core domain ISU62_02410 PF02796 Helix-turn-helix domain of resolvase ISU62_02425 PF05947 Type VI secretion system, TssF ISU62_02435 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_02435 PF17871 AAA lid domain ISU62_02435 PF07724 AAA domain (Cdc48 subfamily) ISU62_02435 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_02440 PF06715 Gp5 C-terminal repeat (3 copies) ISU62_02440 PF04717 Type VI secretion system, phage-baseplate injector ISU62_02470 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU62_02475 PF00691 OmpA family ISU62_02475 PF05736 OprF membrane domain ISU62_02490 PF00271 Helicase conserved C-terminal domain ISU62_02490 PF18339 RapA N-terminal Tudor like domain 1 ISU62_02490 PF00176 SNF2 family N-terminal domain ISU62_02490 PF18337 RapA N-terminal Tudor like domain ISU62_02490 PF12137 RNA polymerase recycling family C-terminal ISU62_02495 PF00136 DNA polymerase family B ISU62_02495 PF03104 DNA polymerase family B, exonuclease domain ISU62_02500 PF09335 SNARE associated Golgi protein ISU62_02505 PF00005 ABC transporter ISU62_02510 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_02520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_02520 PF12793 Sugar transport-related sRNA regulator N-term ISU62_02525 PF07690 Major Facilitator Superfamily ISU62_02530 PF00694 Aconitase C-terminal domain ISU62_02535 PF00330 Aconitase family (aconitate hydratase) ISU62_02540 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU62_02545 PF08502 LeuA allosteric (dimerisation) domain ISU62_02545 PF00682 HMGL-like ISU62_02550 PF01797 Transposase IS200 like ISU62_02560 PF03466 LysR substrate binding domain ISU62_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_02565 PF00501 AMP-binding enzyme ISU62_02570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU62_02570 PF00205 Thiamine pyrophosphate enzyme, central domain ISU62_02570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU62_02575 PF10369 Small subunit of acetolactate synthase ISU62_02585 PF00356 Bacterial regulatory proteins, lacI family ISU62_02585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU62_02590 PF06610 L-alanine exporter ISU62_02600 PF02381 MraZ protein, putative antitoxin-like ISU62_02605 PF01795 MraW methylase family ISU62_02610 PF04999 Cell division protein FtsL ISU62_02615 PF00905 Penicillin binding protein transpeptidase domain ISU62_02615 PF03717 Penicillin-binding Protein dimerisation domain ISU62_02620 PF01225 Mur ligase family, catalytic domain ISU62_02620 PF08245 Mur ligase middle domain ISU62_02620 PF02875 Mur ligase family, glutamate ligase domain ISU62_02625 PF01225 Mur ligase family, catalytic domain ISU62_02625 PF02875 Mur ligase family, glutamate ligase domain ISU62_02625 PF08245 Mur ligase middle domain ISU62_02630 PF00953 Glycosyl transferase family 4 ISU62_02630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU62_02635 PF02875 Mur ligase family, glutamate ligase domain ISU62_02635 PF08245 Mur ligase middle domain ISU62_02640 PF01098 Cell cycle protein ISU62_02645 PF03033 Glycosyltransferase family 28 N-terminal domain ISU62_02645 PF04101 Glycosyltransferase family 28 C-terminal domain ISU62_02650 PF02875 Mur ligase family, glutamate ligase domain ISU62_02650 PF08245 Mur ligase middle domain ISU62_02650 PF01225 Mur ligase family, catalytic domain ISU62_02655 PF07478 D-ala D-ala ligase C-terminus ISU62_02655 PF01820 D-ala D-ala ligase N-terminus ISU62_02660 PF08478 POTRA domain, FtsQ-type ISU62_02660 PF03799 Cell division protein FtsQ ISU62_02665 PF02491 SHS2 domain inserted in FTSA ISU62_02670 PF00091 Tubulin/FtsZ family, GTPase domain ISU62_02670 PF12327 FtsZ family, C-terminal domain ISU62_02675 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU62_02685 PF06558 Secretion monitor precursor protein (SecM) ISU62_02690 PF01043 SecA preprotein cross-linking domain ISU62_02690 PF07516 SecA Wing and Scaffold domain ISU62_02690 PF02810 SEC-C motif ISU62_02690 PF07517 SecA DEAD-like domain ISU62_02700 PF00293 NUDIX domain ISU62_02710 PF02796 Helix-turn-helix domain of resolvase ISU62_02710 PF00665 Integrase core domain ISU62_02720 PF07681 DoxX ISU62_02730 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU62_02735 PF05957 Bacterial protein of unknown function (DUF883) ISU62_02745 PF13721 SecD export protein N-terminal TM region ISU62_02750 PF09335 SNARE associated Golgi protein ISU62_02760 PF00392 Bacterial regulatory proteins, gntR family ISU62_02760 PF07729 FCD domain ISU62_02765 PF07690 Major Facilitator Superfamily ISU62_02775 PF02614 Glucuronate isomerase ISU62_02780 PF01232 Mannitol dehydrogenase Rossmann domain ISU62_02780 PF08125 Mannitol dehydrogenase C-terminal domain ISU62_02785 PF08666 SAF domain ISU62_02785 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU62_02790 PF10688 Bacterial inner membrane protein ISU62_02795 PF01797 Transposase IS200 like ISU62_02800 PF00375 Sodium:dicarboxylate symporter family ISU62_02805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU62_02810 PF01863 Protein of unknown function DUF45 ISU62_02815 PF03797 Autotransporter beta-domain ISU62_02820 PF05175 Methyltransferase small domain ISU62_02825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU62_02825 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_02830 PF03729 Short repeat of unknown function (DUF308) ISU62_02855 PF02342 TerD domain ISU62_02860 PF00092 von Willebrand factor type A domain ISU62_02865 PF08479 POTRA domain, ShlB-type ISU62_02865 PF17287 POTRA domain ISU62_02865 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU62_02870 PF05860 haemagglutination activity domain ISU62_02870 PF13018 Extended Signal Peptide of Type V secretion system ISU62_02870 PF13332 Hemagglutinin repeat ISU62_02870 PF04829 Pre-toxin domain with VENN motif ISU62_02880 PF13332 Hemagglutinin repeat ISU62_02880 PF04829 Pre-toxin domain with VENN motif ISU62_02885 PF04829 Pre-toxin domain with VENN motif ISU62_02885 PF13332 Hemagglutinin repeat ISU62_02900 PF13332 Hemagglutinin repeat ISU62_02900 PF05860 haemagglutination activity domain ISU62_02900 PF04829 Pre-toxin domain with VENN motif ISU62_02900 PF13018 Extended Signal Peptide of Type V secretion system ISU62_02905 PF13018 Extended Signal Peptide of Type V secretion system ISU62_02905 PF13332 Hemagglutinin repeat ISU62_02905 PF05860 haemagglutination activity domain ISU62_02905 PF04829 Pre-toxin domain with VENN motif ISU62_02925 PF03459 TOBE domain ISU62_02925 PF17912 MalK OB fold domain ISU62_02925 PF00005 ABC transporter ISU62_02930 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU62_02935 PF00356 Bacterial regulatory proteins, lacI family ISU62_02940 PF01547 Bacterial extracellular solute-binding protein ISU62_02945 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_02950 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_02960 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU62_02960 PF14310 Fibronectin type III-like domain ISU62_02960 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU62_02970 PF04632 Fusaric acid resistance protein family ISU62_02975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_02975 PF00529 HlyD membrane-fusion protein of T1SS ISU62_02990 PF00155 Aminotransferase class I and II ISU62_03010 PF01042 Endoribonuclease L-PSP ISU62_03030 PF03466 LysR substrate binding domain ISU62_03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_03075 PF04542 Sigma-70 region 2 ISU62_03075 PF00140 Sigma-70 factor, region 1.2 ISU62_03075 PF04539 Sigma-70 region 3 ISU62_03075 PF04546 Sigma-70, non-essential region ISU62_03075 PF03979 Sigma-70 factor, region 1.1 ISU62_03075 PF04545 Sigma-70, region 4 ISU62_03080 PF08278 DNA primase DnaG DnaB-binding ISU62_03080 PF08275 DNA primase catalytic core, N-terminal domain ISU62_03080 PF10410 DnaB-helicase binding domain of primase ISU62_03080 PF01807 CHC2 zinc finger ISU62_03085 PF01165 Ribosomal protein S21 ISU62_03090 PF00814 Glycoprotease family ISU62_03095 PF02660 Glycerol-3-phosphate acyltransferase ISU62_03100 PF02152 Dihydroneopterin aldolase ISU62_03105 PF02673 Bacitracin resistance protein BacA ISU62_03110 PF01966 HD domain ISU62_03110 PF01743 Poly A polymerase head domain ISU62_03110 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU62_03115 PF08239 Bacterial SH3 domain ISU62_03120 PF01928 CYTH domain ISU62_03125 PF08335 GlnD PII-uridylyltransferase ISU62_03125 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU62_03130 PF00294 pfkB family carbohydrate kinase ISU62_03130 PF01467 Cytidylyltransferase-like ISU62_03135 PF13520 Amino acid permease ISU62_03145 PF04380 Membrane fusogenic activity ISU62_03150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU62_03155 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU62_03160 PF03738 Glutathionylspermidine synthase preATP-grasp ISU62_03165 PF06693 Protein of unknown function (DUF1190) ISU62_03170 PF02321 Outer membrane efflux protein ISU62_03175 PF00293 NUDIX domain ISU62_03180 PF06853 Protein of unknown function (DUF1249) ISU62_03190 PF05728 Uncharacterised protein family (UPF0227) ISU62_03195 PF00204 DNA gyrase B ISU62_03195 PF00986 DNA gyrase B subunit, carboxyl terminus ISU62_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_03195 PF01751 Toprim domain ISU62_03200 PF03466 LysR substrate binding domain ISU62_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_03205 PF02525 Flavodoxin-like fold ISU62_03215 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU62_03215 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU62_03220 PF01553 Acyltransferase ISU62_03225 PF07731 Multicopper oxidase ISU62_03225 PF07732 Multicopper oxidase ISU62_03235 PF00248 Aldo/keto reductase family ISU62_03245 PF00465 Iron-containing alcohol dehydrogenase ISU62_03250 PF06719 AraC-type transcriptional regulator N-terminus ISU62_03250 PF12833 Helix-turn-helix domain ISU62_03255 PF09335 SNARE associated Golgi protein ISU62_03260 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU62_03265 PF01618 MotA/TolQ/ExbB proton channel family ISU62_03270 PF02472 Biopolymer transport protein ExbD/TolR ISU62_03305 PF00437 Type II/IV secretion system protein ISU62_03320 PF13629 Pilus formation protein N terminal region ISU62_03320 PF00263 Bacterial type II and III secretion system protein ISU62_03320 PF04972 BON domain ISU62_03325 PF04972 BON domain ISU62_03325 PF13629 Pilus formation protein N terminal region ISU62_03325 PF00263 Bacterial type II and III secretion system protein ISU62_03345 PF13953 PapC C-terminal domain ISU62_03345 PF00577 Outer membrane usher protein ISU62_03345 PF13954 PapC N-terminal domain ISU62_03350 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_03350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_03355 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU62_03355 PF00419 Fimbrial protein ISU62_03360 PF01497 Periplasmic binding protein ISU62_03375 PF00771 FHIPEP family ISU62_03380 PF01312 FlhB HrpN YscU SpaS Family ISU62_03385 PF01311 Bacterial export proteins, family 1 ISU62_03390 PF01313 Bacterial export proteins, family 3 ISU62_03395 PF00813 FliP family ISU62_03400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU62_03410 PF00072 Response regulator receiver domain ISU62_03410 PF00158 Sigma-54 interaction domain ISU62_03410 PF02954 Bacterial regulatory protein, Fis family ISU62_03415 PF02049 Flagellar hook-basal body complex protein FliE ISU62_03420 PF01514 Secretory protein of YscJ/FliF family ISU62_03420 PF08345 Flagellar M-ring protein C-terminal ISU62_03435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU62_03435 PF18269 T3SS EscN ATPase C-terminal domain ISU62_03455 PF13144 Chaperone for flagella basal body P-ring formation ISU62_03460 PF00460 Flagella basal body rod protein ISU62_03465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_03465 PF00460 Flagella basal body rod protein ISU62_03470 PF13861 FlgD Tudor-like domain ISU62_03470 PF03963 Flagellar hook capping protein - N-terminal region ISU62_03470 PF13860 FlgD Ig-like domain ISU62_03475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_03475 PF00460 Flagella basal body rod protein ISU62_03475 PF07559 Flagellar basal body protein FlaE ISU62_03480 PF00460 Flagella basal body rod protein ISU62_03480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_03485 PF00460 Flagella basal body rod protein ISU62_03485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_03490 PF02107 Flagellar L-ring protein ISU62_03495 PF02119 Flagellar P-ring protein ISU62_03505 PF00460 Flagella basal body rod protein ISU62_03505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_03525 PF18500 CadC C-terminal domain 1 ISU62_03525 PF00486 Transcriptional regulatory protein, C terminal ISU62_03530 PF00700 Bacterial flagellin C-terminal helical region ISU62_03530 PF00669 Bacterial flagellin N-terminal helical region ISU62_03535 PF00669 Bacterial flagellin N-terminal helical region ISU62_03535 PF00700 Bacterial flagellin C-terminal helical region ISU62_03540 PF00669 Bacterial flagellin N-terminal helical region ISU62_03540 PF00700 Bacterial flagellin C-terminal helical region ISU62_03545 PF07195 Flagellar hook-associated protein 2 C-terminus ISU62_03545 PF07196 Flagellin hook IN motif ISU62_03545 PF02465 Flagellar hook-associated protein 2 N-terminus ISU62_03570 PF04542 Sigma-70 region 2 ISU62_03570 PF04545 Sigma-70, region 4 ISU62_03575 PF01618 MotA/TolQ/ExbB proton channel family ISU62_03580 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU62_03580 PF00691 OmpA family ISU62_03620 PF00356 Bacterial regulatory proteins, lacI family ISU62_03625 PF00939 Sodium:sulfate symporter transmembrane region ISU62_03640 PF05593 RHS Repeat ISU62_03640 PF03527 RHS protein ISU62_03650 PF04717 Type VI secretion system, phage-baseplate injector ISU62_03655 PF12951 Passenger-associated-transport-repeat ISU62_03665 PF02447 GntP family permease ISU62_03680 PF00664 ABC transporter transmembrane region ISU62_03680 PF00005 ABC transporter ISU62_03685 PF00005 ABC transporter ISU62_03685 PF04954 Siderophore-interacting protein ISU62_03685 PF08021 Siderophore-interacting FAD-binding domain ISU62_03685 PF00664 ABC transporter transmembrane region ISU62_03695 PF00975 Thioesterase domain ISU62_03710 PF00501 AMP-binding enzyme ISU62_03710 PF00668 Condensation domain ISU62_03710 PF08242 Methyltransferase domain ISU62_03710 PF00550 Phosphopantetheine attachment site ISU62_03720 PF08242 Methyltransferase domain ISU62_03720 PF00550 Phosphopantetheine attachment site ISU62_03720 PF00501 AMP-binding enzyme ISU62_03720 PF00668 Condensation domain ISU62_03725 PF00550 Phosphopantetheine attachment site ISU62_03725 PF08242 Methyltransferase domain ISU62_03725 PF00668 Condensation domain ISU62_03725 PF00501 AMP-binding enzyme ISU62_03730 PF01695 IstB-like ATP binding protein ISU62_03735 PF00665 Integrase core domain ISU62_03735 PF02796 Helix-turn-helix domain of resolvase ISU62_03745 PF01797 Transposase IS200 like ISU62_03750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU62_03755 PF13525 Outer membrane lipoprotein ISU62_03760 PF01479 S4 domain ISU62_03760 PF00849 RNA pseudouridylate synthase ISU62_03765 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU62_03770 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_03770 PF02861 Clp amino terminal domain, pathogenicity island component ISU62_03770 PF17871 AAA lid domain ISU62_03770 PF07724 AAA domain (Cdc48 subfamily) ISU62_03770 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_03800 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU62_03805 PF13091 PLD-like domain ISU62_03810 PF13380 CoA binding domain ISU62_03810 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU62_03810 PF00583 Acetyltransferase (GNAT) family ISU62_03815 PF03942 DTW domain ISU62_03820 PF00085 Thioredoxin ISU62_03825 PF00588 SpoU rRNA Methylase family ISU62_03825 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU62_03830 PF07690 Major Facilitator Superfamily ISU62_03835 PF00529 HlyD membrane-fusion protein of T1SS ISU62_03835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_03840 PF01047 MarR family ISU62_03845 PF05437 Branched-chain amino acid transport protein (AzlD) ISU62_03850 PF03591 AzlC protein ISU62_03855 PF07690 Major Facilitator Superfamily ISU62_03865 PF01425 Amidase ISU62_03880 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_03885 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_03890 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_03895 PF00005 ABC transporter ISU62_03900 PF00266 Aminotransferase class-V ISU62_03905 PF01695 IstB-like ATP binding protein ISU62_03910 PF00665 Integrase core domain ISU62_03910 PF02796 Helix-turn-helix domain of resolvase ISU62_03915 PF00266 Aminotransferase class-V ISU62_03920 PF01546 Peptidase family M20/M25/M40 ISU62_03920 PF07687 Peptidase dimerisation domain ISU62_03930 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU62_03930 PF08479 POTRA domain, ShlB-type ISU62_03935 PF05860 haemagglutination activity domain ISU62_03940 PF18071 HMW1C N-terminal ISU62_03940 PF18254 HMW1 domain 2 ISU62_03950 PF09317 Domain of unknown function (DUF1974) ISU62_03950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU62_03950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU62_03955 PF13580 SIS domain ISU62_03960 PF13230 Glutamine amidotransferases class-II ISU62_03965 PF03734 L,D-transpeptidase catalytic domain ISU62_03970 PF11973 NQRA C-terminal domain ISU62_03970 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU62_03975 PF03116 NQR2, RnfD, RnfE family ISU62_03980 PF04205 FMN-binding domain ISU62_03985 PF02508 Rnf-Nqr subunit, membrane protein ISU62_03990 PF02508 Rnf-Nqr subunit, membrane protein ISU62_03995 PF00175 Oxidoreductase NAD-binding domain ISU62_03995 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU62_03995 PF00970 Oxidoreductase FAD-binding domain ISU62_04000 PF02424 ApbE family ISU62_04010 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU62_04015 PF11799 impB/mucB/samB family C-terminal domain ISU62_04015 PF11798 IMS family HHH motif ISU62_04015 PF00817 impB/mucB/samB family ISU62_04020 PF01546 Peptidase family M20/M25/M40 ISU62_04020 PF07687 Peptidase dimerisation domain ISU62_04025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_04025 PF03466 LysR substrate binding domain ISU62_04040 PF00156 Phosphoribosyl transferase domain ISU62_04045 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU62_04050 PF07417 Sigma factor-binding transcriptional regulator Crl ISU62_04055 PF00696 Amino acid kinase family ISU62_04055 PF01472 PUA domain ISU62_04060 PF00171 Aldehyde dehydrogenase family ISU62_04065 PF07238 PilZ domain ISU62_04065 PF07317 Flagellar regulator YcgR ISU62_04075 PF08241 Methyltransferase domain ISU62_04085 PF01202 Shikimate kinase ISU62_04090 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU62_04095 PF04381 Putative exonuclease, RdgC ISU62_04100 PF00480 ROK family ISU62_04105 PF13476 AAA domain ISU62_04110 PF00149 Calcineurin-like phosphoesterase ISU62_04110 PF12320 Type 5 capsule protein repressor C-terminal domain ISU62_04115 PF00072 Response regulator receiver domain ISU62_04115 PF00486 Transcriptional regulatory protein, C terminal ISU62_04120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_04120 PF11808 Phosphate regulon sensor protein PhoR ISU62_04120 PF00512 His Kinase A (phospho-acceptor) domain ISU62_04120 PF00989 PAS fold ISU62_04125 PF12849 PBP superfamily domain ISU62_04130 PF05525 Branched-chain amino acid transport protein ISU62_04135 PF00324 Amino acid permease ISU62_04140 PF00128 Alpha amylase, catalytic domain ISU62_04140 PF02903 Alpha amylase, N-terminal ig-like domain ISU62_04165 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU62_04165 PF00578 AhpC/TSA family ISU62_04170 PF04336 Acyl carrier protein phosphodiesterase ISU62_04175 PF02547 Queuosine biosynthesis protein ISU62_04180 PF01702 Queuine tRNA-ribosyltransferase ISU62_04185 PF02699 Preprotein translocase subunit ISU62_04190 PF13721 SecD export protein N-terminal TM region ISU62_04190 PF02355 Protein export membrane protein ISU62_04190 PF07549 SecD/SecF GG Motif ISU62_04195 PF07549 SecD/SecF GG Motif ISU62_04195 PF02355 Protein export membrane protein ISU62_04205 PF01797 Transposase IS200 like ISU62_04220 PF03477 ATP cone domain ISU62_04225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU62_04225 PF01872 RibD C-terminal domain ISU62_04230 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU62_04235 PF01029 NusB family ISU62_04240 PF00586 AIR synthase related protein, N-terminal domain ISU62_04240 PF02769 AIR synthase related protein, C-terminal domain ISU62_04245 PF04608 Phosphatidylglycerophosphatase A ISU62_04255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU62_04255 PF02779 Transketolase, pyrimidine binding domain ISU62_04255 PF02780 Transketolase, C-terminal domain ISU62_04260 PF00348 Polyprenyl synthetase ISU62_04265 PF02609 Exonuclease VII small subunit ISU62_04270 PF02568 Thiamine biosynthesis protein (ThiI) ISU62_04270 PF02926 THUMP domain ISU62_04275 PF01965 DJ-1/PfpI family ISU62_04280 PF02558 Ketopantoate reductase PanE/ApbA ISU62_04280 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU62_04285 PF04461 Protein of unknown function (DUF520) ISU62_04290 PF07690 Major Facilitator Superfamily ISU62_04295 PF01040 UbiA prenyltransferase family ISU62_04300 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU62_04305 PF00510 Cytochrome c oxidase subunit III ISU62_04310 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU62_04315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU62_04315 PF06481 COX Aromatic Rich Motif ISU62_04320 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU62_04325 PF07690 Major Facilitator Superfamily ISU62_04330 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU62_04330 PF03923 Uncharacterized lipoprotein ISU62_04335 PF01722 BolA-like protein ISU62_04340 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU62_04340 PF05697 Bacterial trigger factor protein (TF) ISU62_04340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU62_04345 PF00574 Clp protease ISU62_04350 PF07724 AAA domain (Cdc48 subfamily) ISU62_04350 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_04350 PF06689 ClpX C4-type zinc finger ISU62_04355 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU62_04355 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU62_04355 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_04360 PF00216 Bacterial DNA-binding protein ISU62_04365 PF13145 PPIC-type PPIASE domain ISU62_04380 PF06508 Queuosine biosynthesis protein QueC ISU62_04385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_04385 PF12793 Sugar transport-related sRNA regulator N-term ISU62_04395 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_04400 PF01037 Lrp/AsnC ligand binding domain ISU62_04400 PF13404 AsnC-type helix-turn-helix domain ISU62_04405 PF00664 ABC transporter transmembrane region ISU62_04405 PF00005 ABC transporter ISU62_04410 PF00664 ABC transporter transmembrane region ISU62_04410 PF00005 ABC transporter ISU62_04415 PF00543 Nitrogen regulatory protein P-II ISU62_04420 PF00909 Ammonium Transporter Family ISU62_04430 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU62_04435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU62_04445 PF05321 Haemolysin expression modulating protein ISU62_04450 PF10757 Biofilm formation regulator YbaJ ISU62_04460 PF00444 Ribosomal protein L36 ISU62_04465 PF01197 Ribosomal protein L31 ISU62_04470 PF00873 AcrB/AcrD/AcrF family ISU62_04475 PF00529 HlyD membrane-fusion protein of T1SS ISU62_04475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_04480 PF00440 Bacterial regulatory proteins, tetR family ISU62_04480 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU62_04485 PF02635 DsrE/DsrF-like family ISU62_04490 PF12795 Mechanosensitive ion channel porin domain ISU62_04490 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU62_04490 PF00924 Mechanosensitive ion channel ISU62_04495 PF10689 Protein of unknown function (DUF2496) ISU62_04505 PF04304 Protein of unknown function (DUF454) ISU62_04510 PF00156 Phosphoribosyl transferase domain ISU62_04515 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU62_04515 PF12169 DNA polymerase III subunits gamma and tau domain III ISU62_04515 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU62_04520 PF02575 YbaB/EbfC DNA-binding family ISU62_04525 PF02132 RecR protein ISU62_04525 PF13662 Toprim domain ISU62_04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_04530 PF00183 Hsp90 protein ISU62_04535 PF05191 Adenylate kinase, active site lid ISU62_04540 PF00762 Ferrochelatase ISU62_04545 PF00970 Oxidoreductase FAD-binding domain ISU62_04545 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU62_04545 PF00175 Oxidoreductase NAD-binding domain ISU62_04550 PF00483 Nucleotidyl transferase ISU62_04555 PF16363 GDP-mannose 4,6 dehydratase ISU62_04560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU62_04565 PF01370 NAD dependent epimerase/dehydratase family ISU62_04595 PF13439 Glycosyltransferase Family 4 ISU62_04595 PF00534 Glycosyl transferases group 1 ISU62_04605 PF01370 NAD dependent epimerase/dehydratase family ISU62_04610 PF01050 Mannose-6-phosphate isomerase ISU62_04610 PF00483 Nucleotidyl transferase ISU62_04615 PF00535 Glycosyl transferase family 2 ISU62_04620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU62_04620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU62_04620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU62_04620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU62_04625 PF02706 Chain length determinant protein ISU62_04630 PF00294 pfkB family carbohydrate kinase ISU62_04635 PF02254 TrkA-N domain ISU62_04635 PF00999 Sodium/hydrogen exchanger family ISU62_04640 PF07690 Major Facilitator Superfamily ISU62_04655 PF04073 Aminoacyl-tRNA editing domain ISU62_04660 PF01963 TraB family ISU62_04665 PF00403 Heavy-metal-associated domain ISU62_04670 PF13411 MerR HTH family regulatory protein ISU62_04675 PF01957 NfeD-like C-terminal, partner-binding ISU62_04680 PF01145 SPFH domain / Band 7 family ISU62_04680 PF16200 C-terminal region of band_7 ISU62_04685 PF00085 Thioredoxin ISU62_04690 PF00106 short chain dehydrogenase ISU62_04695 PF13472 GDSL-like Lipase/Acylhydrolase family ISU62_04700 PF00005 ABC transporter ISU62_04710 PF02222 ATP-grasp domain ISU62_04710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU62_04715 PF00731 AIR carboxylase ISU62_04720 PF00149 Calcineurin-like phosphoesterase ISU62_04725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU62_04730 PF09190 DALR domain ISU62_04730 PF01406 tRNA synthetases class I (C) catalytic domain ISU62_04735 PF01797 Transposase IS200 like ISU62_04745 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU62_04745 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU62_04775 PF00589 Phage integrase family ISU62_04785 PF01066 CDP-alcohol phosphatidyltransferase ISU62_04795 PF01553 Acyltransferase ISU62_04800 PF12147 Putative methyltransferase ISU62_04800 PF12146 Serine aminopeptidase, S33 ISU62_04805 PF00782 Dual specificity phosphatase, catalytic domain ISU62_04820 PF01695 IstB-like ATP binding protein ISU62_04825 PF02796 Helix-turn-helix domain of resolvase ISU62_04825 PF00665 Integrase core domain ISU62_04830 PF03466 LysR substrate binding domain ISU62_04830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_04835 PF00248 Aldo/keto reductase family ISU62_04840 PF00248 Aldo/keto reductase family ISU62_04850 PF14310 Fibronectin type III-like domain ISU62_04850 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU62_04850 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU62_04865 PF00872 Transposase, Mutator family ISU62_04885 PF03797 Autotransporter beta-domain ISU62_04885 PF03212 Pertactin ISU62_04885 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU62_04885 PF13018 Extended Signal Peptide of Type V secretion system ISU62_04900 PF05638 Type VI secretion system effector, Hcp ISU62_04920 PF13693 Winged helix-turn-helix DNA-binding ISU62_04925 PF06832 Penicillin-Binding Protein C-terminus Family ISU62_04925 PF00905 Penicillin binding protein transpeptidase domain ISU62_04925 PF00912 Transglycosylase ISU62_04930 PF01797 Transposase IS200 like ISU62_04935 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU62_04935 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU62_04935 PF07703 Alpha-2-macroglobulin bait region domain ISU62_04935 PF01835 MG2 domain ISU62_04935 PF00207 Alpha-2-macroglobulin family ISU62_04935 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU62_04935 PF17962 Bacterial macroglobulin domain 6 ISU62_04950 PF00171 Aldehyde dehydrogenase family ISU62_04955 PF00205 Thiamine pyrophosphate enzyme, central domain ISU62_04955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU62_04955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU62_04965 PF13407 Periplasmic binding protein domain ISU62_04970 PF00005 ABC transporter ISU62_04975 PF02653 Branched-chain amino acid transport system / permease component ISU62_04980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU62_04980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU62_04985 PF00294 pfkB family carbohydrate kinase ISU62_04990 PF01261 Xylose isomerase-like TIM barrel ISU62_04995 PF04962 KduI/IolB family ISU62_05005 PF00005 ABC transporter ISU62_05005 PF00664 ABC transporter transmembrane region ISU62_05030 PF00196 Bacterial regulatory proteins, luxR family ISU62_05035 PF00313 'Cold-shock' DNA-binding domain ISU62_05040 PF00313 'Cold-shock' DNA-binding domain ISU62_05045 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU62_05050 PF02416 mttA/Hcf106 family ISU62_05055 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU62_05055 PF04055 Radical SAM superfamily ISU62_05060 PF03099 Biotin/lipoate A/B protein ligase family ISU62_05065 PF04359 Protein of unknown function (DUF493) ISU62_05070 PF07943 Penicillin-binding protein 5, C-terminal domain ISU62_05070 PF00768 D-alanyl-D-alanine carboxypeptidase ISU62_05075 PF05036 Sporulation related domain ISU62_05075 PF03330 Lytic transglycolase ISU62_05080 PF01098 Cell cycle protein ISU62_05085 PF03717 Penicillin-binding Protein dimerisation domain ISU62_05085 PF00905 Penicillin binding protein transpeptidase domain ISU62_05090 PF02590 Predicted SPOUT methyltransferase ISU62_05100 PF01467 Cytidylyltransferase-like ISU62_05105 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU62_05105 PF06144 DNA polymerase III, delta subunit ISU62_05110 PF04390 Lipopolysaccharide-assembly ISU62_05115 PF00133 tRNA synthetases class I (I, L, M and V) ISU62_05115 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU62_05115 PF08264 Anticodon-binding domain of tRNA ISU62_05120 PF07295 Zinc-ribbon containing domain ISU62_05125 PF00005 ABC transporter ISU62_05130 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_05135 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_05140 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_05145 PF00795 Carbon-nitrogen hydrolase ISU62_05150 PF00571 CBS domain ISU62_05150 PF03471 Transporter associated domain ISU62_05155 PF02130 Uncharacterized protein family UPF0054 ISU62_05160 PF02562 PhoH-like protein ISU62_05165 PF04055 Radical SAM superfamily ISU62_05165 PF01938 TRAM domain ISU62_05165 PF00919 Uncharacterized protein family UPF0004 ISU62_05170 PF01494 FAD binding domain ISU62_05205 PF00733 Asparagine synthase ISU62_05205 PF13537 Glutamine amidotransferase domain ISU62_05210 PF13344 Haloacid dehalogenase-like hydrolase ISU62_05215 PF00480 ROK family ISU62_05215 PF01047 MarR family ISU62_05220 PF01979 Amidohydrolase family ISU62_05225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU62_05230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU62_05230 PF00367 phosphotransferase system, EIIB ISU62_05230 PF02378 Phosphotransferase system, EIIC ISU62_05235 PF01797 Transposase IS200 like ISU62_05240 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU62_05240 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU62_05245 PF03573 outer membrane porin, OprD family ISU62_05255 PF01475 Ferric uptake regulator family ISU62_05260 PF00258 Flavodoxin ISU62_05265 PF01402 Ribbon-helix-helix protein, copG family ISU62_05270 PF12697 Alpha/beta hydrolase family ISU62_05280 PF00589 Phage integrase family ISU62_05280 PF13356 Arm DNA-binding domain ISU62_05295 PF01695 IstB-like ATP binding protein ISU62_05300 PF00665 Integrase core domain ISU62_05300 PF02796 Helix-turn-helix domain of resolvase ISU62_05315 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU62_05320 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_05325 PF00005 ABC transporter ISU62_05325 PF00571 CBS domain ISU62_05330 PF00268 Ribonucleotide reductase, small chain ISU62_05335 PF02867 Ribonucleotide reductase, barrel domain ISU62_05335 PF00317 Ribonucleotide reductase, all-alpha domain ISU62_05335 PF08343 Ribonucleotide reductase N-terminal ISU62_05340 PF07972 NrdI Flavodoxin like ISU62_05350 PF06392 Acid shock protein repeat ISU62_05355 PF09400 Protein of unknown function (DUF2002) ISU62_05360 PF06711 Protein of unknown function (DUF1198) ISU62_05370 PF00313 'Cold-shock' DNA-binding domain ISU62_05375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_05380 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_05385 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_05385 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU62_05390 PF00005 ABC transporter ISU62_05395 PF00005 ABC transporter ISU62_05400 PF00547 Urease, gamma subunit ISU62_05405 PF00699 Urease beta subunit ISU62_05410 PF01979 Amidohydrolase family ISU62_05410 PF00449 Urease alpha-subunit, N-terminal domain ISU62_05415 PF05194 UreE urease accessory protein, C-terminal domain ISU62_05415 PF02814 UreE urease accessory protein, N-terminal domain ISU62_05420 PF01730 UreF ISU62_05425 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU62_05435 PF03253 Urea transporter ISU62_05440 PF03824 High-affinity nickel-transport protein ISU62_05445 PF06411 HdeA/HdeB family ISU62_05450 PF07885 Ion channel ISU62_05450 PF02254 TrkA-N domain ISU62_05455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU62_05460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU62_05470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU62_05475 PF02378 Phosphotransferase system, EIIC ISU62_05480 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU62_05485 PF12833 Helix-turn-helix domain ISU62_05485 PF07883 Cupin domain ISU62_05490 PF04794 YdjC-like protein ISU62_05500 PF03925 SeqA protein C-terminal domain ISU62_05500 PF17206 SeqA protein N-terminal domain ISU62_05505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU62_05505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU62_05505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU62_05505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU62_05520 PF00072 Response regulator receiver domain ISU62_05520 PF00486 Transcriptional regulatory protein, C terminal ISU62_05525 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU62_05525 PF00512 His Kinase A (phospho-acceptor) domain ISU62_05525 PF13493 Domain of unknown function (DUF4118) ISU62_05525 PF13492 GAF domain ISU62_05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_05530 PF02669 K+-transporting ATPase, c chain ISU62_05540 PF03814 Potassium-transporting ATPase A subunit ISU62_05555 PF10725 Protein of unknown function (DUF2517) ISU62_05560 PF08349 Protein of unknown function (DUF1722) ISU62_05565 PF03441 FAD binding domain of DNA photolyase ISU62_05565 PF00875 DNA photolyase ISU62_05570 PF02112 cAMP phosphodiesterases class-II ISU62_05575 PF01784 NIF3 (NGG1p interacting factor 3) ISU62_05590 PF02626 Carboxyltransferase domain, subdomain A and B ISU62_05595 PF03746 LamB/YcsF family ISU62_05610 PF01470 Pyroglutamyl peptidase ISU62_05615 PF03167 Uracil DNA glycosylase superfamily ISU62_05620 PF01228 Glycine radical ISU62_05630 PF12796 Ankyrin repeats (3 copies) ISU62_05635 PF00271 Helicase conserved C-terminal domain ISU62_05635 PF00270 DEAD/DEAH box helicase ISU62_05640 PF05175 Methyltransferase small domain ISU62_05645 PF00890 FAD binding domain ISU62_05645 PF02910 Fumarate reductase flavoprotein C-term ISU62_05650 PF04542 Sigma-70 region 2 ISU62_05650 PF08281 Sigma-70, region 4 ISU62_05655 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU62_05655 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU62_05660 PF17188 MucB/RseB C-terminal domain ISU62_05660 PF03888 MucB/RseB N-terminal domain ISU62_05675 PF06421 GTP-binding protein LepA C-terminus ISU62_05675 PF03144 Elongation factor Tu domain 2 ISU62_05675 PF00009 Elongation factor Tu GTP binding domain ISU62_05675 PF00679 Elongation factor G C-terminus ISU62_05680 PF10502 Signal peptidase, peptidase S26 ISU62_05685 PF00035 Double-stranded RNA binding motif ISU62_05685 PF14622 Ribonuclease-III-like ISU62_05690 PF01926 50S ribosome-binding GTPase ISU62_05690 PF07650 KH domain ISU62_05695 PF11967 Recombination protein O N terminal ISU62_05695 PF02565 Recombination protein O C terminal ISU62_05700 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU62_05705 PF01648 4'-phosphopantetheinyl transferase superfamily ISU62_05710 PF01797 Transposase IS200 like ISU62_05715 PF12838 4Fe-4S dicluster domain ISU62_05720 PF01418 Helix-turn-helix domain, rpiR family ISU62_05720 PF01380 SIS domain ISU62_05725 PF01380 SIS domain ISU62_05735 PF14437 MafB19-like deaminase ISU62_05740 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_05740 PF01464 Transglycosylase SLT domain ISU62_05745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU62_05745 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU62_05745 PF02769 AIR synthase related protein, C-terminal domain ISU62_05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_05775 PF00512 His Kinase A (phospho-acceptor) domain ISU62_05780 PF13942 YfhG lipoprotein ISU62_05785 PF00072 Response regulator receiver domain ISU62_05785 PF00158 Sigma-54 interaction domain ISU62_05790 PF00795 Carbon-nitrogen hydrolase ISU62_05790 PF02540 NAD synthase ISU62_05795 PF00543 Nitrogen regulatory protein P-II ISU62_05805 PF00970 Oxidoreductase FAD-binding domain ISU62_05805 PF00042 Globin ISU62_05805 PF00175 Oxidoreductase NAD-binding domain ISU62_05810 PF00464 Serine hydroxymethyltransferase ISU62_05815 PF13505 Outer membrane protein beta-barrel domain ISU62_05820 PF12832 MFS_1 like family ISU62_05825 PF00874 PRD domain ISU62_05830 PF06226 Protein of unknown function (DUF1007) ISU62_05835 PF03824 High-affinity nickel-transport protein ISU62_05840 PF00459 Inositol monophosphatase family ISU62_05845 PF00588 SpoU rRNA Methylase family ISU62_05850 PF02082 Transcriptional regulator ISU62_05855 PF00266 Aminotransferase class-V ISU62_05860 PF01592 NifU-like N terminal domain ISU62_05865 PF01521 Iron-sulphur cluster biosynthesis ISU62_05870 PF00226 DnaJ domain ISU62_05870 PF07743 HSCB C-terminal oligomerisation domain ISU62_05875 PF00012 Hsp70 protein ISU62_05880 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU62_05885 PF04384 Iron-sulphur cluster assembly ISU62_05890 PF12404 Peptidase ISU62_05890 PF00883 Cytosol aminopeptidase family, catalytic domain ISU62_05895 PF07179 SseB protein N-terminal domain ISU62_05895 PF14581 SseB protein C-terminal domain ISU62_05910 PF03797 Autotransporter beta-domain ISU62_05910 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU62_05910 PF03212 Pertactin ISU62_05915 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU62_05915 PF03797 Autotransporter beta-domain ISU62_05915 PF03212 Pertactin ISU62_05925 PF00334 Nucleoside diphosphate kinase ISU62_05930 PF04055 Radical SAM superfamily ISU62_05940 PF13464 Domain of unknown function (DUF4115) ISU62_05945 PF04551 GcpE protein ISU62_05950 PF03129 Anticodon binding domain ISU62_05950 PF13393 Histidyl-tRNA synthetase ISU62_05955 PF09976 Tetratricopeptide repeat-like domain ISU62_05960 PF13360 PQQ-like domain ISU62_05965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU62_05965 PF01926 50S ribosome-binding GTPase ISU62_05975 PF07191 zinc-ribbons ISU62_05980 PF13742 OB-fold nucleic acid binding domain ISU62_05980 PF02601 Exonuclease VII, large subunit ISU62_05985 PF00571 CBS domain ISU62_05985 PF00478 IMP dehydrogenase / GMP reductase domain ISU62_05990 PF00958 GMP synthase C terminal domain ISU62_05990 PF02540 NAD synthase ISU62_05990 PF00117 Glutamine amidotransferase class-I ISU62_05995 PF01797 Transposase IS200 like ISU62_06000 PF05638 Type VI secretion system effector, Hcp ISU62_06030 PF00872 Transposase, Mutator family ISU62_06045 PF08543 Phosphomethylpyrimidine kinase ISU62_06065 PF00781 Diacylglycerol kinase catalytic domain ISU62_06070 PF16325 Peptidase family U32 C-terminal domain ISU62_06070 PF01136 Peptidase family U32 ISU62_06075 PF07411 Domain of unknown function (DUF1508) ISU62_06080 PF00072 Response regulator receiver domain ISU62_06080 PF00486 Transcriptional regulatory protein, C terminal ISU62_06090 PF07690 Major Facilitator Superfamily ISU62_06095 PF00873 AcrB/AcrD/AcrF family ISU62_06100 PF00873 AcrB/AcrD/AcrF family ISU62_06105 PF13533 Biotin-lipoyl like ISU62_06110 PF00005 ABC transporter ISU62_06110 PF08402 TOBE domain ISU62_06115 PF00155 Aminotransferase class I and II ISU62_06115 PF00392 Bacterial regulatory proteins, gntR family ISU62_06120 PF00202 Aminotransferase class-III ISU62_06130 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06135 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06145 PF01769 Divalent cation transporter ISU62_06145 PF03448 MgtE intracellular N domain ISU62_06145 PF00571 CBS domain ISU62_06155 PF02541 Ppx/GppA phosphatase family ISU62_06160 PF02503 Polyphosphate kinase middle domain ISU62_06160 PF13090 Polyphosphate kinase C-terminal domain 2 ISU62_06160 PF17941 Polyphosphate kinase C-terminal domain 1 ISU62_06160 PF13089 Polyphosphate kinase N-terminal domain ISU62_06165 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06170 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06175 PF00005 ABC transporter ISU62_06185 PF13302 Acetyltransferase (GNAT) domain ISU62_06190 PF00551 Formyl transferase ISU62_06195 PF00586 AIR synthase related protein, N-terminal domain ISU62_06195 PF02769 AIR synthase related protein, C-terminal domain ISU62_06205 PF01797 Transposase IS200 like ISU62_06210 PF00308 Bacterial dnaA protein ISU62_06215 PF03960 ArsC family ISU62_06220 PF07720 Tetratricopeptide repeat ISU62_06220 PF01435 Peptidase family M48 ISU62_06225 PF01594 AI-2E family transporter ISU62_06235 PF00578 AhpC/TSA family ISU62_06240 PF01842 ACT domain ISU62_06245 PF00701 Dihydrodipicolinate synthetase family ISU62_06250 PF06804 NlpB/DapX lipoprotein ISU62_06255 PF01797 Transposase IS200 like ISU62_06260 PF01259 SAICAR synthetase ISU62_06265 PF04228 Putative neutral zinc metallopeptidase ISU62_06270 PF04284 Protein of unknown function (DUF441) ISU62_06275 PF17176 tRNA-binding domain ISU62_06275 PF05127 Helicase ISU62_06275 PF08351 Domain of unknown function (DUF1726) ISU62_06275 PF13718 GNAT acetyltransferase 2 ISU62_06280 PF13980 Uncharacterised protein family (UPF0370) ISU62_06285 PF02557 D-alanyl-D-alanine carboxypeptidase ISU62_06290 PF07687 Peptidase dimerisation domain ISU62_06290 PF01546 Peptidase family M20/M25/M40 ISU62_06295 PF03960 ArsC family ISU62_06310 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06315 PF00005 ABC transporter ISU62_06315 PF08402 TOBE domain ISU62_06325 PF00884 Sulfatase ISU62_06330 PF04055 Radical SAM superfamily ISU62_06330 PF13186 Iron-sulfur cluster-binding domain ISU62_06335 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU62_06345 PF00873 AcrB/AcrD/AcrF family ISU62_06355 PF00196 Bacterial regulatory proteins, luxR family ISU62_06355 PF00072 Response regulator receiver domain ISU62_06360 PF00037 4Fe-4S binding domain ISU62_06360 PF12800 4Fe-4S binding domain ISU62_06360 PF13187 4Fe-4S dicluster domain ISU62_06365 PF03927 NapD protein ISU62_06370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU62_06370 PF00384 Molybdopterin oxidoreductase ISU62_06370 PF01568 Molydopterin dinucleotide binding domain ISU62_06370 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU62_06375 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU62_06380 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU62_06385 PF00293 NUDIX domain ISU62_06390 PF03949 Malic enzyme, NAD binding domain ISU62_06390 PF01515 Phosphate acetyl/butaryl transferase ISU62_06390 PF00390 Malic enzyme, N-terminal domain ISU62_06395 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU62_06400 PF01218 Coproporphyrinogen III oxidase ISU62_06405 PF00583 Acetyltransferase (GNAT) family ISU62_06415 PF03212 Pertactin ISU62_06415 PF13018 Extended Signal Peptide of Type V secretion system ISU62_06415 PF03797 Autotransporter beta-domain ISU62_06415 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU62_06420 PF04076 Bacterial OB fold (BOF) protein ISU62_06425 PF06572 Protein of unknown function (DUF1131) ISU62_06430 PF04261 Dyp-type peroxidase family ISU62_06435 PF00701 Dihydrodipicolinate synthetase family ISU62_06440 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU62_06445 PF12468 Type III secretion system leucine rich repeat protein ISU62_06450 PF00480 ROK family ISU62_06455 PF04074 YhcH/YjgK/YiaL ISU62_06460 PF01418 Helix-turn-helix domain, rpiR family ISU62_06460 PF01380 SIS domain ISU62_06465 PF07690 Major Facilitator Superfamily ISU62_06475 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06480 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06500 PF00072 Response regulator receiver domain ISU62_06500 PF00486 Transcriptional regulatory protein, C terminal ISU62_06505 PF00672 HAMP domain ISU62_06505 PF00512 His Kinase A (phospho-acceptor) domain ISU62_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_06515 PF00155 Aminotransferase class I and II ISU62_06525 PF00557 Metallopeptidase family M24 ISU62_06535 PF00474 Sodium:solute symporter family ISU62_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_06540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU62_06545 PF00005 ABC transporter ISU62_06545 PF02687 FtsX-like permease family ISU62_06545 PF12704 MacB-like periplasmic core domain ISU62_06550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_06555 PF00072 Response regulator receiver domain ISU62_06555 PF00486 Transcriptional regulatory protein, C terminal ISU62_06560 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU62_06560 PF00672 HAMP domain ISU62_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_06560 PF00512 His Kinase A (phospho-acceptor) domain ISU62_06570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU62_06575 PF02896 PEP-utilising enzyme, TIM barrel domain ISU62_06575 PF00391 PEP-utilising enzyme, mobile domain ISU62_06575 PF05524 PEP-utilising enzyme, N-terminal ISU62_06580 PF00381 PTS HPr component phosphorylation site ISU62_06585 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_06595 PF04354 ZipA, C-terminal FtsZ-binding domain ISU62_06600 PF01653 NAD-dependent DNA ligase adenylation domain ISU62_06600 PF12826 Helix-hairpin-helix motif ISU62_06600 PF00533 BRCA1 C Terminus (BRCT) domain ISU62_06600 PF03120 NAD-dependent DNA ligase OB-fold domain ISU62_06600 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU62_06605 PF12843 Putative quorum-sensing-regulated virulence factor ISU62_06630 PF01797 Transposase IS200 like ISU62_06635 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU62_06670 PF07662 Na+ dependent nucleoside transporter C-terminus ISU62_06670 PF01773 Na+ dependent nucleoside transporter N-terminus ISU62_06670 PF07670 Nucleoside recognition ISU62_06675 PF01566 Natural resistance-associated macrophage protein ISU62_06685 PF00248 Aldo/keto reductase family ISU62_06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_06690 PF03466 LysR substrate binding domain ISU62_06700 PF02685 Glucokinase ISU62_06705 PF07350 Protein of unknown function (DUF1479) ISU62_06710 PF00155 Aminotransferase class I and II ISU62_06715 PF01292 Prokaryotic cytochrome b561 ISU62_06725 PF03783 Curli production assembly/transport component CsgG ISU62_06735 PF05643 Putative bacterial lipoprotein (DUF799) ISU62_06745 PF02613 Nitrate reductase delta subunit ISU62_06750 PF04976 DMSO reductase anchor subunit (DmsC) ISU62_06755 PF13247 4Fe-4S dicluster domain ISU62_06755 PF12800 4Fe-4S binding domain ISU62_06760 PF01568 Molydopterin dinucleotide binding domain ISU62_06760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU62_06760 PF00384 Molybdopterin oxidoreductase ISU62_06770 PF05638 Type VI secretion system effector, Hcp ISU62_06780 PF00005 ABC transporter ISU62_06785 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_06795 PF13406 Transglycosylase SLT domain ISU62_06840 PF05947 Type VI secretion system, TssF ISU62_06845 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_06845 PF07724 AAA domain (Cdc48 subfamily) ISU62_06845 PF17871 AAA lid domain ISU62_06845 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_06850 PF16970 Type-1 fimbrial protein, A ISU62_06855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_06855 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_06860 PF00577 Outer membrane usher protein ISU62_06860 PF13954 PapC N-terminal domain ISU62_06860 PF13953 PapC C-terminal domain ISU62_06865 PF00872 Transposase, Mutator family ISU62_06870 PF00577 Outer membrane usher protein ISU62_06870 PF13954 PapC N-terminal domain ISU62_06870 PF13953 PapC C-terminal domain ISU62_06880 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU62_06885 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU62_06900 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU62_06910 PF00665 Integrase core domain ISU62_06910 PF02796 Helix-turn-helix domain of resolvase ISU62_06915 PF01695 IstB-like ATP binding protein ISU62_06925 PF06744 Type VI secretion protein IcmF C-terminal ISU62_06925 PF06761 Intracellular multiplication and human macrophage-killing ISU62_06925 PF14331 ImcF-related N-terminal domain ISU62_06930 PF06715 Gp5 C-terminal repeat (3 copies) ISU62_06930 PF04717 Type VI secretion system, phage-baseplate injector ISU62_06945 PF07024 ImpE protein ISU62_06960 PF08274 PhnA Zinc-Ribbon ISU62_06960 PF03831 PhnA domain ISU62_06970 PF04011 LemA family ISU62_06985 PF00005 ABC transporter ISU62_06990 PF03379 CcmB protein ISU62_06995 PF01578 Cytochrome C assembly protein ISU62_07000 PF04995 Heme exporter protein D (CcmD) ISU62_07005 PF03100 CcmE ISU62_07010 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU62_07010 PF01578 Cytochrome C assembly protein ISU62_07015 PF08534 Redoxin ISU62_07020 PF03918 Cytochrome C biogenesis protein ISU62_07025 PF03918 Cytochrome C biogenesis protein ISU62_07030 PF04333 MlaA lipoprotein ISU62_07035 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU62_07040 PF04175 Protein of unknown function (DUF406) ISU62_07045 PF00108 Thiolase, N-terminal domain ISU62_07045 PF02803 Thiolase, C-terminal domain ISU62_07050 PF00378 Enoyl-CoA hydratase/isomerase ISU62_07050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU62_07050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU62_07055 PF00300 Histidine phosphatase superfamily (branch 1) ISU62_07065 PF01713 Smr domain ISU62_07070 PF05175 Methyltransferase small domain ISU62_07075 PF01264 Chorismate synthase ISU62_07080 PF03411 Penicillin-insensitive murein endopeptidase ISU62_07085 PF01925 Sulfite exporter TauE/SafE ISU62_07090 PF04315 Elongation factor P hydroxylase ISU62_07095 PF08891 YfcL protein ISU62_07100 PF01266 FAD dependent oxidoreductase ISU62_07100 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU62_07105 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU62_07105 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU62_07115 PF00419 Fimbrial protein ISU62_07125 PF00892 EamA-like transporter family ISU62_07135 PF11890 Domain of unknown function (DUF3410) ISU62_07135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU62_07135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU62_07140 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU62_07140 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU62_07145 PF01416 tRNA pseudouridine synthase ISU62_07150 PF09335 SNARE associated Golgi protein ISU62_07155 PF01039 Carboxyl transferase domain ISU62_07155 PF17848 Acetyl-coA carboxylase zinc finger domain ISU62_07160 PF02875 Mur ligase family, glutamate ligase domain ISU62_07160 PF08245 Mur ligase middle domain ISU62_07165 PF05036 Sporulation related domain ISU62_07170 PF02674 Colicin V production protein ISU62_07175 PF00156 Phosphoribosyl transferase domain ISU62_07180 PF02441 Flavoprotein ISU62_07185 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_07190 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_07195 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_07200 PF00005 ABC transporter ISU62_07205 PF08338 Domain of unknown function (DUF1731) ISU62_07205 PF01370 NAD dependent epimerase/dehydratase family ISU62_07215 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU62_07220 PF00293 NUDIX domain ISU62_07230 PF03611 PTS system sugar-specific permease component ISU62_07235 PF00872 Transposase, Mutator family ISU62_07245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU62_07250 PF00356 Bacterial regulatory proteins, lacI family ISU62_07250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU62_07255 PF01515 Phosphate acetyl/butaryl transferase ISU62_07255 PF07085 DRTGG domain ISU62_07260 PF00871 Acetokinase family ISU62_07265 PF04217 Protein of unknown function, DUF412 ISU62_07270 PF03887 YfbU domain ISU62_07275 PF13419 Haloacid dehalogenase-like hydrolase ISU62_07280 PF03600 Citrate transporter ISU62_07280 PF02080 TrkA-C domain ISU62_07290 PF00155 Aminotransferase class I and II ISU62_07295 PF03466 LysR substrate binding domain ISU62_07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_07300 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU62_07305 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU62_07310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU62_07310 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU62_07320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU62_07320 PF10531 SLBB domain ISU62_07320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU62_07325 PF00384 Molybdopterin oxidoreductase ISU62_07325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU62_07325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU62_07325 PF01568 Molydopterin dinucleotide binding domain ISU62_07330 PF00146 NADH dehydrogenase ISU62_07335 PF12838 4Fe-4S dicluster domain ISU62_07340 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU62_07345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU62_07350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU62_07350 PF00361 Proton-conducting membrane transporter ISU62_07355 PF00361 Proton-conducting membrane transporter ISU62_07360 PF00361 Proton-conducting membrane transporter ISU62_07370 PF04074 YhcH/YjgK/YiaL ISU62_07375 PF01202 Shikimate kinase ISU62_07380 PF00106 short chain dehydrogenase ISU62_07385 PF02638 Glycosyl hydrolase-like 10 ISU62_07390 PF00356 Bacterial regulatory proteins, lacI family ISU62_07395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU62_07395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU62_07405 PF03928 Haem-degrading ISU62_07410 PF00920 Dehydratase family ISU62_07415 PF05957 Bacterial protein of unknown function (DUF883) ISU62_07425 PF00425 chorismate binding enzyme ISU62_07430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU62_07430 PF16582 Middle domain of thiamine pyrophosphate ISU62_07430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU62_07435 PF12697 Alpha/beta hydrolase family ISU62_07440 PF00378 Enoyl-CoA hydratase/isomerase ISU62_07445 PF13378 Enolase C-terminal domain-like ISU62_07455 PF02885 Glycosyl transferase family, helical bundle domain ISU62_07460 PF07338 Protein of unknown function (DUF1471) ISU62_07465 PF05971 RNA methyltransferase ISU62_07475 PF01695 IstB-like ATP binding protein ISU62_07480 PF00665 Integrase core domain ISU62_07480 PF02796 Helix-turn-helix domain of resolvase ISU62_07485 PF13426 PAS domain ISU62_07485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU62_07485 PF08447 PAS fold ISU62_07490 PF00005 ABC transporter ISU62_07495 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_07500 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_07510 PF00210 Ferritin-like domain ISU62_07515 PF13649 Methyltransferase domain ISU62_07525 PF00892 EamA-like transporter family ISU62_07530 PF13505 Outer membrane protein beta-barrel domain ISU62_07550 PF08240 Alcohol dehydrogenase GroES-like domain ISU62_07550 PF00107 Zinc-binding dehydrogenase ISU62_07555 PF13407 Periplasmic binding protein domain ISU62_07560 PF00005 ABC transporter ISU62_07565 PF02653 Branched-chain amino acid transport system / permease component ISU62_07570 PF00356 Bacterial regulatory proteins, lacI family ISU62_07575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_07575 PF03466 LysR substrate binding domain ISU62_07580 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU62_07590 PF02028 BCCT, betaine/carnitine/choline family transporter ISU62_07595 PF00355 Rieske [2Fe-2S] domain ISU62_07595 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ISU62_07600 PF00970 Oxidoreductase FAD-binding domain ISU62_07600 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU62_07600 PF00175 Oxidoreductase NAD-binding domain ISU62_07605 PF08479 POTRA domain, ShlB-type ISU62_07605 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU62_07605 PF17287 POTRA domain ISU62_07610 PF04829 Pre-toxin domain with VENN motif ISU62_07610 PF05860 haemagglutination activity domain ISU62_07610 PF13332 Hemagglutinin repeat ISU62_07610 PF13018 Extended Signal Peptide of Type V secretion system ISU62_07650 PF05594 Haemagluttinin repeat ISU62_07650 PF13332 Hemagglutinin repeat ISU62_07650 PF05860 haemagglutination activity domain ISU62_07650 PF15526 Novel toxin 21 ISU62_07650 PF04829 Pre-toxin domain with VENN motif ISU62_07660 PF00005 ABC transporter ISU62_07660 PF17912 MalK OB fold domain ISU62_07665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU62_07665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU62_07665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU62_07665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU62_07670 PF00356 Bacterial regulatory proteins, lacI family ISU62_07680 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_07685 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_07690 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU62_07710 PF00924 Mechanosensitive ion channel ISU62_07715 PF01867 CRISPR associated protein Cas1 ISU62_07725 PF09611 CRISPR-associated protein (Cas_Csy1) ISU62_07730 PF09614 CRISPR-associated protein (Cas_Csy2) ISU62_07735 PF09615 CRISPR-associated protein (Cas_Csy3) ISU62_07740 PF09618 CRISPR-associated protein (Cas_Csy4) ISU62_07745 PF00248 Aldo/keto reductase family ISU62_07755 PF00083 Sugar (and other) transporter ISU62_07765 PF03466 LysR substrate binding domain ISU62_07765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_07770 PF03472 Autoinducer binding domain ISU62_07770 PF00196 Bacterial regulatory proteins, luxR family ISU62_07775 PF00765 Autoinducer synthase ISU62_07795 PF01594 AI-2E family transporter ISU62_07805 PF00196 Bacterial regulatory proteins, luxR family ISU62_07810 PF01266 FAD dependent oxidoreductase ISU62_07815 PF00872 Transposase, Mutator family ISU62_07820 PF13991 BssS protein family ISU62_07825 PF06183 DinI-like family ISU62_07830 PF01979 Amidohydrolase family ISU62_07835 PF03992 Antibiotic biosynthesis monooxygenase ISU62_07845 PF00872 Transposase, Mutator family ISU62_07855 PF00849 RNA pseudouridylate synthase ISU62_07855 PF01479 S4 domain ISU62_07860 PF02545 Maf-like protein ISU62_07865 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU62_07870 PF01783 Ribosomal L32p protein family ISU62_07875 PF02504 Fatty acid synthesis protein ISU62_07880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU62_07880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU62_07885 PF00698 Acyl transferase domain ISU62_07895 PF00550 Phosphopantetheine attachment site ISU62_07900 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU62_07900 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU62_07910 PF01063 Amino-transferase class IV ISU62_07915 PF02618 YceG-like family ISU62_07920 PF02223 Thymidylate kinase ISU62_07925 PF09115 DNA polymerase III, delta subunit, C terminal ISU62_07930 PF01026 TatD related DNase ISU62_07935 PF00367 phosphotransferase system, EIIB ISU62_07935 PF02378 Phosphotransferase system, EIIC ISU62_07945 PF08501 Shikimate dehydrogenase substrate binding domain ISU62_07950 PF01230 HIT domain ISU62_07955 PF07233 Protein of unknown function (DUF1425) ISU62_07960 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU62_07960 PF13036 Peptidoglycan-synthase activator LpoB ISU62_07965 PF01636 Phosphotransferase enzyme family ISU62_07970 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU62_07975 PF05728 Uncharacterised protein family (UPF0227) ISU62_07980 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_07995 PF00872 Transposase, Mutator family ISU62_08000 PF05433 Glycine zipper 2TM domain ISU62_08005 PF02559 CarD-like/TRCF domain ISU62_08005 PF00270 DEAD/DEAH box helicase ISU62_08005 PF00271 Helicase conserved C-terminal domain ISU62_08005 PF03461 TRCF domain ISU62_08005 PF17757 UvrB interaction domain ISU62_08010 PF02687 FtsX-like permease family ISU62_08010 PF12704 MacB-like periplasmic core domain ISU62_08015 PF00005 ABC transporter ISU62_08020 PF02687 FtsX-like permease family ISU62_08020 PF12704 MacB-like periplasmic core domain ISU62_08025 PF00480 ROK family ISU62_08030 PF00480 ROK family ISU62_08035 PF02146 Sir2 family ISU62_08040 PF01546 Peptidase family M20/M25/M40 ISU62_08040 PF07687 Peptidase dimerisation domain ISU62_08045 PF08007 Cupin superfamily protein ISU62_08050 PF08918 PhoQ Sensor ISU62_08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_08055 PF00486 Transcriptional regulatory protein, C terminal ISU62_08055 PF00072 Response regulator receiver domain ISU62_08065 PF08328 Adenylosuccinate lyase C-terminal ISU62_08065 PF00206 Lyase ISU62_08070 PF04356 Protein of unknown function (DUF489) ISU62_08080 PF00293 NUDIX domain ISU62_08085 PF00849 RNA pseudouridylate synthase ISU62_08090 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU62_08095 PF00356 Bacterial regulatory proteins, lacI family ISU62_08095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU62_08105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU62_08105 PF08447 PAS fold ISU62_08110 PF05368 NmrA-like family ISU62_08115 PF01638 HxlR-like helix-turn-helix ISU62_08125 PF00328 Histidine phosphatase superfamily (branch 2) ISU62_08130 PF14001 YdfZ protein ISU62_08140 PF01037 Lrp/AsnC ligand binding domain ISU62_08140 PF13404 AsnC-type helix-turn-helix domain ISU62_08145 PF10777 Inner membrane protein YlaC ISU62_08150 PF00107 Zinc-binding dehydrogenase ISU62_08150 PF08659 KR domain ISU62_08150 PF14765 Polyketide synthase dehydratase ISU62_08150 PF00550 Phosphopantetheine attachment site ISU62_08150 PF00698 Acyl transferase domain ISU62_08150 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU62_08150 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU62_08150 PF16197 Ketoacyl-synthetase C-terminal extension ISU62_08150 PF08240 Alcohol dehydrogenase GroES-like domain ISU62_08155 PF02929 Beta galactosidase small chain ISU62_08155 PF00703 Glycosyl hydrolases family 2 ISU62_08155 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU62_08155 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU62_08155 PF16353 Domain of unknown function(DUF4981) ISU62_08160 PF00313 'Cold-shock' DNA-binding domain ISU62_08165 PF10781 Dextransucrase DSRB ISU62_08175 PF02308 MgtC family ISU62_08180 PF00689 Cation transporting ATPase, C-terminus ISU62_08180 PF00690 Cation transporter/ATPase, N-terminus ISU62_08190 PF05280 Flagellar transcriptional activator (FlhC) ISU62_08195 PF01618 MotA/TolQ/ExbB proton channel family ISU62_08200 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU62_08200 PF00691 OmpA family ISU62_08205 PF01584 CheW-like domain ISU62_08205 PF09078 CheY binding ISU62_08205 PF02895 Signal transducing histidine kinase, homodimeric domain ISU62_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_08205 PF01627 Hpt domain ISU62_08210 PF01584 CheW-like domain ISU62_08215 PF07690 Major Facilitator Superfamily ISU62_08220 PF01042 Endoribonuclease L-PSP ISU62_08230 PF13309 HTH domain ISU62_08230 PF08348 YheO-like PAS domain ISU62_08235 PF12951 Passenger-associated-transport-repeat ISU62_08250 PF00672 HAMP domain ISU62_08250 PF02203 Tar ligand binding domain homologue ISU62_08250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU62_08255 PF00672 HAMP domain ISU62_08255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU62_08255 PF02203 Tar ligand binding domain homologue ISU62_08260 PF01739 CheR methyltransferase, SAM binding domain ISU62_08260 PF03705 CheR methyltransferase, all-alpha domain ISU62_08265 PF01339 CheB methylesterase ISU62_08265 PF00072 Response regulator receiver domain ISU62_08270 PF00072 Response regulator receiver domain ISU62_08275 PF04344 Chemotaxis phosphatase, CheZ ISU62_08280 PF01510 N-acetylmuramoyl-L-alanine amidase ISU62_08285 PF05658 Head domain of trimeric autotransporter adhesin ISU62_08285 PF13018 Extended Signal Peptide of Type V secretion system ISU62_08285 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU62_08285 PF03895 YadA-like membrane anchor domain ISU62_08295 PF00842 Alanine racemase, C-terminal domain ISU62_08295 PF01168 Alanine racemase, N-terminal domain ISU62_08325 PF02796 Helix-turn-helix domain of resolvase ISU62_08325 PF00665 Integrase core domain ISU62_08335 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_08340 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_08345 PF10767 Protein of unknown function (DUF2593) ISU62_08350 PF05958 tRNA (Uracil-5-)-methyltransferase ISU62_08355 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_08380 PF01032 FecCD transport family ISU62_08385 PF01032 FecCD transport family ISU62_08390 PF00005 ABC transporter ISU62_08395 PF03059 Nicotianamine synthase protein ISU62_08400 PF10100 Staphylopine dehydrogenase ISU62_08405 PF00892 EamA-like transporter family ISU62_08410 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_08415 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_08420 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_08425 PF00005 ABC transporter ISU62_08430 PF01817 Chorismate mutase type II ISU62_08435 PF12883 Protein of unknown function (DUF3828) ISU62_08440 PF01370 NAD dependent epimerase/dehydratase family ISU62_08445 PF13460 NAD(P)H-binding ISU62_08445 PF11066 Protein of unknown function (DUF2867) ISU62_08450 PF01212 Beta-eliminating lyase ISU62_08460 PF00205 Thiamine pyrophosphate enzyme, central domain ISU62_08460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU62_08460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU62_08465 PF00970 Oxidoreductase FAD-binding domain ISU62_08465 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU62_08465 PF00175 Oxidoreductase NAD-binding domain ISU62_08470 PF03063 Prismane/CO dehydrogenase family ISU62_08475 PF03956 Lysine exporter LysO ISU62_08480 PF11398 Protein of unknown function (DUF2813) ISU62_08485 PF04393 Protein of unknown function (DUF535) ISU62_08490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_08495 PF02687 FtsX-like permease family ISU62_08495 PF00005 ABC transporter ISU62_08495 PF12704 MacB-like periplasmic core domain ISU62_08500 PF00313 'Cold-shock' DNA-binding domain ISU62_08505 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU62_08510 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_08510 PF07724 AAA domain (Cdc48 subfamily) ISU62_08510 PF17871 AAA lid domain ISU62_08510 PF02861 Clp amino terminal domain, pathogenicity island component ISU62_08510 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_08520 PF01176 Translation initiation factor 1A / IF-1 ISU62_08525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU62_08530 PF00664 ABC transporter transmembrane region ISU62_08530 PF00005 ABC transporter ISU62_08535 PF00005 ABC transporter ISU62_08535 PF00664 ABC transporter transmembrane region ISU62_08540 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_08545 PF01037 Lrp/AsnC ligand binding domain ISU62_08550 PF01580 FtsK/SpoIIIE family ISU62_08550 PF09397 Ftsk gamma domain ISU62_08550 PF17854 FtsK alpha domain ISU62_08550 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU62_08555 PF03548 Outer membrane lipoprotein carrier protein LolA ISU62_08560 PF16193 AAA C-terminal domain ISU62_08560 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_08560 PF12002 MgsA AAA+ ATPase C terminal ISU62_08565 PF02403 Seryl-tRNA synthetase N-terminal domain ISU62_08565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU62_08570 PF07690 Major Facilitator Superfamily ISU62_08575 PF04055 Radical SAM superfamily ISU62_08585 PF01228 Glycine radical ISU62_08585 PF02901 Pyruvate formate lyase-like ISU62_08590 PF01226 Formate/nitrite transporter ISU62_08595 PF18381 YcaO cyclodehydratase C-terminal domain ISU62_08595 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU62_08600 PF17763 Glutaminase/Asparaginase C-terminal domain ISU62_08600 PF00710 Asparaginase, N-terminal ISU62_08605 PF13018 Extended Signal Peptide of Type V secretion system ISU62_08605 PF03895 YadA-like membrane anchor domain ISU62_08605 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU62_08605 PF13018 Extended Signal Peptide of Type V secretion system ISU62_08605 PF03895 YadA-like membrane anchor domain ISU62_08605 PF05658 Head domain of trimeric autotransporter adhesin ISU62_08605 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU62_08605 PF05658 Head domain of trimeric autotransporter adhesin ISU62_08615 PF00266 Aminotransferase class-V ISU62_08620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU62_08625 PF02224 Cytidylate kinase ISU62_08630 PF00575 S1 RNA binding domain ISU62_08635 PF00216 Bacterial DNA-binding protein ISU62_08640 PF03772 Competence protein ISU62_08640 PF00753 Metallo-beta-lactamase superfamily ISU62_08645 PF00664 ABC transporter transmembrane region ISU62_08645 PF00005 ABC transporter ISU62_08650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU62_08655 PF07063 Domain of unknown function (DUF1338) ISU62_08660 PF00313 'Cold-shock' DNA-binding domain ISU62_08665 PF03966 Trm112p-like protein ISU62_08670 PF02348 Cytidylyltransferase ISU62_08675 PF01636 Phosphotransferase enzyme family ISU62_08680 PF13847 Methyltransferase domain ISU62_08685 PF17192 MukF middle domain ISU62_08685 PF03882 MukF winged-helix domain ISU62_08685 PF17193 MukF C-terminal domain ISU62_08690 PF04288 MukE-like family ISU62_08695 PF04310 MukB N-terminal ISU62_08695 PF16330 MukB hinge domain ISU62_08705 PF01471 Putative peptidoglycan binding domain ISU62_08705 PF03734 L,D-transpeptidase catalytic domain ISU62_08710 PF05951 Bacterial protein of unknown function (DUF882) ISU62_08715 PF00753 Metallo-beta-lactamase superfamily ISU62_08725 PF00155 Aminotransferase class I and II ISU62_08730 PF00267 Gram-negative porin ISU62_08735 PF00152 tRNA synthetases class II (D, K and N) ISU62_08735 PF01336 OB-fold nucleic acid binding domain ISU62_08740 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU62_08740 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU62_08745 PF01433 Peptidase family M1 domain ISU62_08745 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU62_08745 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU62_08750 PF01180 Dihydroorotate dehydrogenase ISU62_08755 PF07126 Cell-division protein ZapC ISU62_08760 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU62_08760 PF03473 MOSC domain ISU62_08760 PF03476 MOSC N-terminal beta barrel domain ISU62_08765 PF10672 S-adenosylmethionine-dependent methyltransferase ISU62_08765 PF01170 Putative RNA methylase family UPF0020 ISU62_08765 PF02926 THUMP domain ISU62_08770 PF12848 ABC transporter ISU62_08770 PF16326 ABC transporter C-terminal domain ISU62_08770 PF00005 ABC transporter ISU62_08775 PF04403 Paraquat-inducible protein A ISU62_08780 PF02470 MlaD protein ISU62_08790 PF03886 ABC-type transport auxiliary lipoprotein component ISU62_08795 PF04957 Ribosome modulation factor ISU62_08800 PF01797 Transposase IS200 like ISU62_08810 PF01695 IstB-like ATP binding protein ISU62_08815 PF02796 Helix-turn-helix domain of resolvase ISU62_08815 PF00665 Integrase core domain ISU62_08830 PF07977 FabA-like domain ISU62_08835 PF13654 AAA domain ISU62_08835 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU62_08840 PF06303 MatP N-terminal domain ISU62_08840 PF17414 MatP C-terminal ribbon-helix-helix domain ISU62_08845 PF01797 Transposase IS200 like ISU62_08850 PF00691 OmpA family ISU62_08850 PF01389 OmpA-like transmembrane domain ISU62_08855 PF03846 Cell division inhibitor SulA ISU62_08860 PF04994 TfoX C-terminal domain ISU62_08860 PF04993 TfoX N-terminal domain ISU62_08865 PF12805 FUSC-like inner membrane protein yccS ISU62_08870 PF03733 Inner membrane component domain ISU62_08875 PF12462 DNA helicase IV / RNA helicase N terminal ISU62_08875 PF00580 UvrD/REP helicase N-terminal domain ISU62_08875 PF13361 UvrD-like helicase C-terminal domain ISU62_08880 PF02142 MGS-like domain ISU62_08885 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU62_08890 PF13380 CoA binding domain ISU62_08895 PF08755 Hemimethylated DNA-binding protein YccV like ISU62_08900 PF10672 S-adenosylmethionine-dependent methyltransferase ISU62_08900 PF17785 PUA-like domain ISU62_08905 PF00708 Acylphosphatase ISU62_08910 PF04358 DsrC like protein ISU62_08930 PF01565 FAD binding domain ISU62_08930 PF08031 Berberine and berberine like ISU62_08945 PF07977 FabA-like domain ISU62_08950 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU62_08950 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU62_08960 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU62_08960 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU62_08970 PF00378 Enoyl-CoA hydratase/isomerase ISU62_08985 PF00550 Phosphopantetheine attachment site ISU62_08990 PF00698 Acyl transferase domain ISU62_09000 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU62_09015 PF00691 OmpA family ISU62_09015 PF05736 OprF membrane domain ISU62_09025 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_09025 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_09025 PF07724 AAA domain (Cdc48 subfamily) ISU62_09025 PF17871 AAA lid domain ISU62_09030 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU62_09030 PF04717 Type VI secretion system, phage-baseplate injector ISU62_09030 PF13296 Putative type VI secretion system Rhs element Vgr ISU62_09120 PF00005 ABC transporter ISU62_09120 PF12848 ABC transporter ISU62_09130 PF00872 Transposase, Mutator family ISU62_09135 PF00899 ThiF family ISU62_09140 PF00994 Probable molybdopterin binding domain ISU62_09140 PF03454 MoeA C-terminal region (domain IV) ISU62_09140 PF03453 MoeA N-terminal region (domain I and II) ISU62_09150 PF00005 ABC transporter ISU62_09155 PF13533 Biotin-lipoyl like ISU62_09170 PF00756 Putative esterase ISU62_09175 PF08240 Alcohol dehydrogenase GroES-like domain ISU62_09175 PF00107 Zinc-binding dehydrogenase ISU62_09180 PF03466 LysR substrate binding domain ISU62_09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_09185 PF06779 Uncharacterised MFS-type transporter YbfB ISU62_09190 PF01227 GTP cyclohydrolase I ISU62_09195 PF04235 Protein of unknown function (DUF418) ISU62_09200 PF13407 Periplasmic binding protein domain ISU62_09205 PF00005 ABC transporter ISU62_09210 PF02653 Branched-chain amino acid transport system / permease component ISU62_09215 PF02698 DUF218 domain ISU62_09220 PF03949 Malic enzyme, NAD binding domain ISU62_09220 PF00390 Malic enzyme, N-terminal domain ISU62_09225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU62_09225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU62_09230 PF04172 LrgB-like family ISU62_09235 PF03788 LrgA family ISU62_09240 PF07690 Major Facilitator Superfamily ISU62_09260 PF01797 Transposase IS200 like ISU62_09265 PF01588 Putative tRNA binding domain ISU62_09265 PF09334 tRNA synthetases class I (M) ISU62_09270 PF10609 NUBPL iron-transfer P-loop NTPase ISU62_09275 PF00485 Phosphoribulokinase / Uridine kinase family ISU62_09280 PF00692 dUTPase ISU62_09285 PF05170 AsmA family ISU62_09290 PF03741 Integral membrane protein TerC family ISU62_09290 PF03471 Transporter associated domain ISU62_09290 PF00571 CBS domain ISU62_09295 PF06276 Ferric iron reductase FhuF-like transporter ISU62_09295 PF11575 FhuF 2Fe-2S C-terminal domain ISU62_09300 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU62_09305 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU62_09315 PF06276 Ferric iron reductase FhuF-like transporter ISU62_09315 PF04183 IucA / IucC family ISU62_09320 PF00005 ABC transporter ISU62_09325 PF01032 FecCD transport family ISU62_09330 PF01032 FecCD transport family ISU62_09335 PF01497 Periplasmic binding protein ISU62_09340 PF07715 TonB-dependent Receptor Plug Domain ISU62_09340 PF07660 Secretin and TonB N terminus short domain ISU62_09340 PF00593 TonB dependent receptor ISU62_09345 PF06276 Ferric iron reductase FhuF-like transporter ISU62_09345 PF04183 IucA / IucC family ISU62_09350 PF00483 Nucleotidyl transferase ISU62_09355 PF00483 Nucleotidyl transferase ISU62_09360 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU62_09360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU62_09365 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU62_09365 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU62_09370 PF00977 Histidine biosynthesis protein ISU62_09375 PF00977 Histidine biosynthesis protein ISU62_09380 PF00117 Glutamine amidotransferase class-I ISU62_09385 PF00475 Imidazoleglycerol-phosphate dehydratase ISU62_09390 PF00155 Aminotransferase class I and II ISU62_09395 PF00815 Histidinol dehydrogenase ISU62_09400 PF08029 HisG, C-terminal domain ISU62_09400 PF01634 ATP phosphoribosyltransferase ISU62_09410 PF01370 NAD dependent epimerase/dehydratase family ISU62_09425 PF02653 Branched-chain amino acid transport system / permease component ISU62_09430 PF00005 ABC transporter ISU62_09435 PF00005 ABC transporter ISU62_09440 PF00465 Iron-containing alcohol dehydrogenase ISU62_09445 PF13520 Amino acid permease ISU62_09455 PF08411 Exonuclease C-terminal ISU62_09455 PF00929 Exonuclease ISU62_09465 PF04363 Protein of unknown function (DUF496) ISU62_09470 PF00872 Transposase, Mutator family ISU62_09475 PF13419 Haloacid dehalogenase-like hydrolase ISU62_09480 PF14002 YniB-like protein ISU62_09485 PF03881 Fructosamine kinase ISU62_09495 PF00950 ABC 3 transport family ISU62_09500 PF00950 ABC 3 transport family ISU62_09505 PF00005 ABC transporter ISU62_09510 PF01297 Zinc-uptake complex component A periplasmic ISU62_09515 PF01464 Transglycosylase SLT domain ISU62_09520 PF01914 MarC family integral membrane protein ISU62_09530 PF13619 KTSC domain ISU62_09535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU62_09535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU62_09535 PF03129 Anticodon binding domain ISU62_09535 PF02824 TGS domain ISU62_09540 PF00707 Translation initiation factor IF-3, C-terminal domain ISU62_09540 PF05198 Translation initiation factor IF-3, N-terminal domain ISU62_09545 PF01632 Ribosomal protein L35 ISU62_09550 PF00453 Ribosomal protein L20 ISU62_09560 PF01409 tRNA synthetases class II core domain (F) ISU62_09560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU62_09565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU62_09565 PF01588 Putative tRNA binding domain ISU62_09565 PF03147 Ferredoxin-fold anticodon binding domain ISU62_09565 PF03483 B3/4 domain ISU62_09565 PF03484 tRNA synthetase B5 domain ISU62_09570 PF00216 Bacterial DNA-binding protein ISU62_09580 PF01032 FecCD transport family ISU62_09585 PF00255 Glutathione peroxidase ISU62_09590 PF00005 ABC transporter ISU62_09595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU62_09600 PF00535 Glycosyl transferase family 2 ISU62_09605 PF00551 Formyl transferase ISU62_09605 PF02911 Formyl transferase, C-terminal domain ISU62_09605 PF01370 NAD dependent epimerase/dehydratase family ISU62_09615 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU62_09620 PF00892 EamA-like transporter family ISU62_09635 PF00877 NlpC/P60 family ISU62_09640 PF03099 Biotin/lipoate A/B protein ligase family ISU62_09640 PF10437 Bacterial lipoate protein ligase C-terminus ISU62_09650 PF00793 DAHP synthetase I family ISU62_09655 PF03618 Kinase/pyrophosphorylase ISU62_09660 PF02896 PEP-utilising enzyme, TIM barrel domain ISU62_09660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU62_09660 PF00391 PEP-utilising enzyme, mobile domain ISU62_09670 PF01594 AI-2E family transporter ISU62_09675 PF02913 FAD linked oxidases, C-terminal domain ISU62_09675 PF13183 4Fe-4S dicluster domain ISU62_09675 PF01565 FAD binding domain ISU62_09680 PF03061 Thioesterase superfamily ISU62_09685 PF01521 Iron-sulphur cluster biosynthesis ISU62_09690 PF01458 Uncharacterized protein family (UPF0051) ISU62_09695 PF00005 ABC transporter ISU62_09700 PF01458 Uncharacterized protein family (UPF0051) ISU62_09705 PF00266 Aminotransferase class-V ISU62_09710 PF02657 Fe-S metabolism associated domain ISU62_09715 PF17969 L,D-transpeptidase C-terminal domain ISU62_09715 PF01476 LysM domain ISU62_09715 PF03734 L,D-transpeptidase catalytic domain ISU62_09720 PF01695 IstB-like ATP binding protein ISU62_09735 PF04728 Lipoprotein leucine-zipper ISU62_09755 PF01554 MatE ISU62_09765 PF00677 Lumazine binding domain ISU62_09775 PF07690 Major Facilitator Superfamily ISU62_09780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_09780 PF03466 LysR substrate binding domain ISU62_09785 PF00356 Bacterial regulatory proteins, lacI family ISU62_09795 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU62_09795 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU62_09800 PF00877 NlpC/P60 family ISU62_09805 PF00462 Glutaredoxin ISU62_09815 PF00929 Exonuclease ISU62_09820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU62_09825 PF18807 Tripartite Tc toxins repeat ISU62_09825 PF14431 YwqJ-like deaminase ISU62_09830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU62_09835 PF16925 Tetracyclin repressor-like, C-terminal domain ISU62_09835 PF00440 Bacterial regulatory proteins, tetR family ISU62_09840 PF08019 Phosphoethanolamine transferase EptA/EptB ISU62_09840 PF00884 Sulfatase ISU62_09845 PF06945 Protein of unknown function (DUF1289) ISU62_09850 PF00248 Aldo/keto reductase family ISU62_09855 PF01047 MarR family ISU62_09860 PF01797 Transposase IS200 like ISU62_09865 PF05433 Glycine zipper 2TM domain ISU62_09870 PF03702 Anhydro-N-acetylmuramic acid kinase ISU62_09875 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU62_09880 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU62_09880 PF01243 Pyridoxamine 5'-phosphate oxidase ISU62_09885 PF00579 tRNA synthetases class I (W and Y) ISU62_09885 PF01479 S4 domain ISU62_09890 PF08543 Phosphomethylpyrimidine kinase ISU62_09895 PF02798 Glutathione S-transferase, N-terminal domain ISU62_09895 PF00043 Glutathione S-transferase, C-terminal domain ISU62_09900 PF11656 YjbD family (DUF3811) ISU62_09905 PF04893 Yip1 domain ISU62_09910 PF00854 POT family ISU62_09920 PF00005 ABC transporter ISU62_09925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_09925 PF00005 ABC transporter ISU62_09930 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_09930 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU62_09935 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_09940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_09950 PF02954 Bacterial regulatory protein, Fis family ISU62_09950 PF00158 Sigma-54 interaction domain ISU62_09955 PF04012 PspA/IM30 family ISU62_09960 PF06667 Phage shock protein B ISU62_09965 PF04024 PspC domain ISU62_09975 PF04317 YcjX-like family, DUF463 ISU62_09980 PF05128 Domain of unknown function (DUF697) ISU62_09985 PF08808 RES domain ISU62_09990 PF09722 Protein of unknown function (DUF2384) ISU62_09995 PF18024 Helix-turn-helix domain ISU62_09995 PF00158 Sigma-54 interaction domain ISU62_10000 PF01797 Transposase IS200 like ISU62_10005 PF08534 Redoxin ISU62_10010 PF13378 Enolase C-terminal domain-like ISU62_10010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU62_10015 PF00246 Zinc carboxypeptidase ISU62_10020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_10025 PF01544 CorA-like Mg2+ transporter protein ISU62_10035 PF07859 alpha/beta hydrolase fold ISU62_10040 PF01171 PP-loop family ISU62_10045 PF10371 Domain of unknown function ISU62_10045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU62_10045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU62_10045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU62_10045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU62_10050 PF00893 Small Multidrug Resistance protein ISU62_10055 PF02308 MgtC family ISU62_10060 PF03891 Domain of unknown function (DUF333) ISU62_10065 PF03724 META domain ISU62_10070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU62_10070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU62_10075 PF11739 Dicarboxylate transport ISU62_10080 PF13617 YnbE-like lipoprotein ISU62_10085 PF07027 Protein of unknown function (DUF1318) ISU62_10090 PF08125 Mannitol dehydrogenase C-terminal domain ISU62_10090 PF01232 Mannitol dehydrogenase Rossmann domain ISU62_10095 PF00325 Bacterial regulatory proteins, crp family ISU62_10095 PF04198 Putative sugar-binding domain ISU62_10100 PF02525 Flavodoxin-like fold ISU62_10105 PF00270 DEAD/DEAH box helicase ISU62_10105 PF11898 Domain of unknown function (DUF3418) ISU62_10105 PF04408 Helicase associated domain (HA2) ISU62_10105 PF00271 Helicase conserved C-terminal domain ISU62_10105 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU62_10120 PF00089 Trypsin ISU62_10130 PF01292 Prokaryotic cytochrome b561 ISU62_10135 PF04264 YceI-like domain ISU62_10155 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU62_10160 PF00672 HAMP domain ISU62_10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_10160 PF00512 His Kinase A (phospho-acceptor) domain ISU62_10165 PF00072 Response regulator receiver domain ISU62_10165 PF00486 Transcriptional regulatory protein, C terminal ISU62_10175 PF13520 Amino acid permease ISU62_10180 PF07338 Protein of unknown function (DUF1471) ISU62_10185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU62_10185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU62_10185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU62_10190 PF02233 NAD(P) transhydrogenase beta subunit ISU62_10195 PF00582 Universal stress protein family ISU62_10200 PF13545 Crp-like helix-turn-helix domain ISU62_10200 PF00027 Cyclic nucleotide-binding domain ISU62_10205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU62_10205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU62_10210 PF00245 Alkaline phosphatase ISU62_10225 PF13419 Haloacid dehalogenase-like hydrolase ISU62_10230 PF01842 ACT domain ISU62_10235 PF00205 Thiamine pyrophosphate enzyme, central domain ISU62_10235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU62_10235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU62_10265 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU62_10265 PF01048 Phosphorylase superfamily ISU62_10275 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_10280 PF09084 NMT1/THI5 like ISU62_10285 PF13407 Periplasmic binding protein domain ISU62_10295 PF00356 Bacterial regulatory proteins, lacI family ISU62_10300 PF00654 Voltage gated chloride channel ISU62_10310 PF00480 ROK family ISU62_10315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_10315 PF03466 LysR substrate binding domain ISU62_10325 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU62_10330 PF00206 Lyase ISU62_10330 PF10415 Fumarase C C-terminus ISU62_10335 PF01238 Phosphomannose isomerase type I ISU62_10340 PF06097 Bacterial protein of unknown function (DUF945) ISU62_10350 PF13593 SBF-like CPA transporter family (DUF4137) ISU62_10355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU62_10355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU62_10360 PF02311 AraC-like ligand binding domain ISU62_10360 PF12833 Helix-turn-helix domain ISU62_10365 PF02653 Branched-chain amino acid transport system / permease component ISU62_10370 PF00005 ABC transporter ISU62_10375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU62_10380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_10385 PF02610 L-arabinose isomerase ISU62_10385 PF11762 L-arabinose isomerase C-terminal domain ISU62_10390 PF00005 ABC transporter ISU62_10390 PF03412 Peptidase C39 family ISU62_10390 PF00664 ABC transporter transmembrane region ISU62_10400 PF13533 Biotin-lipoyl like ISU62_10405 PF00664 ABC transporter transmembrane region ISU62_10405 PF00005 ABC transporter ISU62_10410 PF00664 ABC transporter transmembrane region ISU62_10410 PF00005 ABC transporter ISU62_10410 PF03412 Peptidase C39 family ISU62_10415 PF10754 Protein of unknown function (DUF2569) ISU62_10420 PF02508 Rnf-Nqr subunit, membrane protein ISU62_10425 PF04060 Putative Fe-S cluster ISU62_10430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU62_10430 PF13237 4Fe-4S dicluster domain ISU62_10430 PF13375 RnfC Barrel sandwich hybrid domain ISU62_10430 PF10531 SLBB domain ISU62_10435 PF12833 Helix-turn-helix domain ISU62_10435 PF06445 GyrI-like small molecule binding domain ISU62_10440 PF03116 NQR2, RnfD, RnfE family ISU62_10445 PF04205 FMN-binding domain ISU62_10450 PF02508 Rnf-Nqr subunit, membrane protein ISU62_10455 PF10576 Iron-sulfur binding domain of endonuclease III ISU62_10455 PF00633 Helix-hairpin-helix motif ISU62_10455 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU62_10460 PF01370 NAD dependent epimerase/dehydratase family ISU62_10465 PF07690 Major Facilitator Superfamily ISU62_10470 PF00773 RNB domain ISU62_10470 PF00575 S1 RNA binding domain ISU62_10470 PF17876 Cold shock domain ISU62_10470 PF08206 Ribonuclease B OB domain ISU62_10475 PF02554 Carbon starvation protein CstA ISU62_10475 PF13722 5TM C-terminal transporter carbon starvation CstA ISU62_10480 PF04328 Selenoprotein, putative ISU62_10485 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU62_10495 PF00596 Class II Aldolase and Adducin N-terminal domain ISU62_10500 PF05433 Glycine zipper 2TM domain ISU62_10505 PF01253 Translation initiation factor SUI1 ISU62_10510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU62_10520 PF18073 Rubredoxin metal binding domain ISU62_10525 PF06305 Lipopolysaccharide assembly protein A domain ISU62_10530 PF01569 PAP2 superfamily ISU62_10535 PF00925 GTP cyclohydrolase II ISU62_10540 PF00694 Aconitase C-terminal domain ISU62_10540 PF00330 Aconitase family (aconitate hydratase) ISU62_10550 PF03466 LysR substrate binding domain ISU62_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_10555 PF08272 Topoisomerase I zinc-ribbon-like ISU62_10555 PF01131 DNA topoisomerase ISU62_10555 PF01751 Toprim domain ISU62_10555 PF01396 Topoisomerase DNA binding C4 zinc finger ISU62_10565 PF10692 Protein of unknown function (DUF2498) ISU62_10570 PF01343 Peptidase family S49 ISU62_10570 PF08496 Peptidase family S49 N-terminal ISU62_10575 PF00106 short chain dehydrogenase ISU62_10580 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU62_10585 PF00849 RNA pseudouridylate synthase ISU62_10585 PF01479 S4 domain ISU62_10590 PF01300 Telomere recombination ISU62_10595 PF02811 PHP domain ISU62_10605 PF00425 chorismate binding enzyme ISU62_10605 PF04715 Anthranilate synthase component I, N terminal region ISU62_10610 PF00117 Glutamine amidotransferase class-I ISU62_10615 PF00591 Glycosyl transferase family, a/b domain ISU62_10615 PF02885 Glycosyl transferase family, helical bundle domain ISU62_10620 PF00218 Indole-3-glycerol phosphate synthase ISU62_10620 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU62_10625 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_10630 PF00290 Tryptophan synthase alpha chain ISU62_10640 PF03922 OmpW family ISU62_10665 PF04279 Intracellular septation protein A ISU62_10670 PF03061 Thioesterase superfamily ISU62_10675 PF00872 Transposase, Mutator family ISU62_10680 PF03544 Gram-negative bacterial TonB protein C-terminal ISU62_10685 PF03795 YCII-related domain ISU62_10700 PF13505 Outer membrane protein beta-barrel domain ISU62_10715 PF13396 Phospholipase_D-nuclease N-terminal ISU62_10715 PF13091 PLD-like domain ISU62_10720 PF04269 Protein of unknown function, DUF440 ISU62_10730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_10730 PF00005 ABC transporter ISU62_10735 PF00005 ABC transporter ISU62_10735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_10740 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_10740 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU62_10745 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_10750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_10755 PF01914 MarC family integral membrane protein ISU62_10760 PF00465 Iron-containing alcohol dehydrogenase ISU62_10760 PF00171 Aldehyde dehydrogenase family ISU62_10765 PF02796 Helix-turn-helix domain of resolvase ISU62_10765 PF00665 Integrase core domain ISU62_10770 PF01695 IstB-like ATP binding protein ISU62_10775 PF00265 Thymidine kinase ISU62_10780 PF00816 H-NS histone family ISU62_10785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU62_10785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU62_10785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU62_10790 PF00072 Response regulator receiver domain ISU62_10795 PF02810 SEC-C motif ISU62_10800 PF01842 ACT domain ISU62_10800 PF00551 Formyl transferase ISU62_10805 PF00872 Transposase, Mutator family ISU62_10825 PF00872 Transposase, Mutator family ISU62_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_10830 PF03466 LysR substrate binding domain ISU62_10835 PF03372 Endonuclease/Exonuclease/phosphatase family ISU62_10840 PF00293 NUDIX domain ISU62_10845 PF07383 Protein of unknown function (DUF1496) ISU62_10850 PF01751 Toprim domain ISU62_10850 PF01131 DNA topoisomerase ISU62_10860 PF00881 Nitroreductase family ISU62_10865 PF01343 Peptidase family S49 ISU62_10870 PF00710 Asparaginase, N-terminal ISU62_10870 PF17763 Glutaminase/Asparaginase C-terminal domain ISU62_10875 PF00857 Isochorismatase family ISU62_10880 PF07023 Protein of unknown function (DUF1315) ISU62_10885 PF01641 SelR domain ISU62_10890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU62_10890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU62_10895 PF01263 Aldose 1-epimerase ISU62_10900 PF06629 MltA-interacting protein MipA ISU62_10905 PF08298 PrkA AAA domain ISU62_10905 PF06798 PrkA serine protein kinase C-terminal domain ISU62_10910 PF04285 Protein of unknown function (DUF444) ISU62_10920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_10920 PF03466 LysR substrate binding domain ISU62_10925 PF02678 Pirin ISU62_10925 PF05726 Pirin C-terminal cupin domain ISU62_10930 PF07690 Major Facilitator Superfamily ISU62_10935 PF01266 FAD dependent oxidoreductase ISU62_10940 PF04293 SpoVR like protein ISU62_10945 PF07840 FadR C-terminal domain ISU62_10945 PF00392 Bacterial regulatory proteins, gntR family ISU62_10950 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ISU62_10955 PF02600 Disulfide bond formation protein DsbB ISU62_10970 PF00266 Aminotransferase class-V ISU62_10980 PF00872 Transposase, Mutator family ISU62_10985 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU62_11140 PF00872 Transposase, Mutator family ISU62_11205 PF06530 Phage antitermination protein Q ISU62_11215 PF05772 NinB protein ISU62_11230 PF01695 IstB-like ATP binding protein ISU62_11235 PF00665 Integrase core domain ISU62_11235 PF02796 Helix-turn-helix domain of resolvase ISU62_11240 PF00589 Phage integrase family ISU62_11240 PF12167 Arm DNA-binding domain ISU62_11245 PF03692 Putative zinc- or iron-chelating domain ISU62_11250 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU62_11255 PF13406 Transglycosylase SLT domain ISU62_11260 PF05166 YcgL domain ISU62_11265 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU62_11265 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU62_11270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU62_11275 PF03776 Septum formation topological specificity factor MinE ISU62_11285 PF00501 AMP-binding enzyme ISU62_11285 PF13193 AMP-binding enzyme C-terminal domain ISU62_11295 PF03843 Outer membrane lipoprotein Slp family ISU62_11300 PF00814 Glycoprotease family ISU62_11305 PF13307 Helicase C-terminal domain ISU62_11305 PF04851 Type III restriction enzyme, res subunit ISU62_11310 PF01042 Endoribonuclease L-PSP ISU62_11315 PF00893 Small Multidrug Resistance protein ISU62_11320 PF00893 Small Multidrug Resistance protein ISU62_11325 PF01081 KDPG and KHG aldolase ISU62_11330 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU62_11330 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU62_11335 PF01418 Helix-turn-helix domain, rpiR family ISU62_11335 PF01380 SIS domain ISU62_11340 PF00224 Pyruvate kinase, barrel domain ISU62_11340 PF02887 Pyruvate kinase, alpha/beta domain ISU62_11350 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU62_11355 PF01476 LysM domain ISU62_11355 PF08525 Opacity-associated protein A N-terminal motif ISU62_11355 PF01551 Peptidase family M23 ISU62_11360 PF01297 Zinc-uptake complex component A periplasmic ISU62_11365 PF00005 ABC transporter ISU62_11370 PF00950 ABC 3 transport family ISU62_11375 PF17864 RuvB AAA lid domain ISU62_11375 PF05491 RuvB C-terminal winged helix domain ISU62_11375 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU62_11380 PF07499 RuvA, C-terminal domain ISU62_11380 PF01330 RuvA N terminal domain ISU62_11385 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU62_11390 PF01709 Transcriptional regulator ISU62_11395 PF00293 NUDIX domain ISU62_11400 PF02938 GAD domain ISU62_11400 PF00152 tRNA synthetases class II (D, K and N) ISU62_11400 PF01336 OB-fold nucleic acid binding domain ISU62_11405 PF01904 Protein of unknown function DUF72 ISU62_11410 PF01124 MAPEG family ISU62_11415 PF13649 Methyltransferase domain ISU62_11420 PF08003 Protein of unknown function (DUF1698) ISU62_11425 PF03932 CutC family ISU62_11430 PF06185 YecM protein ISU62_11435 PF03485 Arginyl tRNA synthetase N terminal domain ISU62_11435 PF05746 DALR anticodon binding domain ISU62_11435 PF00750 tRNA synthetases class I (R) ISU62_11450 PF03023 Lipid II flippase MurJ ISU62_11455 PF04337 Protein of unknown function, DUF480 ISU62_11460 PF13302 Acetyltransferase (GNAT) domain ISU62_11470 PF07273 Protein of unknown function (DUF1439) ISU62_11475 PF02613 Nitrate reductase delta subunit ISU62_11480 PF02811 PHP domain ISU62_11490 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU62_11490 PF00480 ROK family ISU62_11495 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU62_11515 PF08402 TOBE domain ISU62_11515 PF00005 ABC transporter ISU62_11520 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_11525 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_11535 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU62_11545 PF00916 Sulfate permease family ISU62_11545 PF01740 STAS domain ISU62_11550 PF00793 DAHP synthetase I family ISU62_11555 PF13369 Transglutaminase-like superfamily ISU62_11560 PF04247 Invasion gene expression up-regulator, SirB ISU62_11565 PF13847 Methyltransferase domain ISU62_11565 PF17827 PrmC N-terminal domain ISU62_11570 PF03462 PCRF domain ISU62_11570 PF00472 RF-1 domain ISU62_11575 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU62_11575 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU62_11575 PF01488 Shikimate / quinate 5-dehydrogenase ISU62_11580 PF03550 Outer membrane lipoprotein LolB ISU62_11585 PF08544 GHMP kinases C terminal ISU62_11585 PF00288 GHMP kinases N terminal domain ISU62_11590 PF14572 Phosphoribosyl synthetase-associated domain ISU62_11590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU62_11595 PF10762 Protein of unknown function (DUF2583) ISU62_11600 PF01195 Peptidyl-tRNA hydrolase ISU62_11605 PF01926 50S ribosome-binding GTPase ISU62_11605 PF06071 Protein of unknown function (DUF933) ISU62_11645 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU62_11650 PF00072 Response regulator receiver domain ISU62_11650 PF00486 Transcriptional regulatory protein, C terminal ISU62_11655 PF00672 HAMP domain ISU62_11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_11655 PF00512 His Kinase A (phospho-acceptor) domain ISU62_11700 PF08242 Methyltransferase domain ISU62_11720 PF00872 Transposase, Mutator family ISU62_11765 PF01370 NAD dependent epimerase/dehydratase family ISU62_11770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU62_11770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU62_11775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU62_11775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU62_11785 PF05962 HutD ISU62_11790 PF01979 Amidohydrolase family ISU62_11800 PF01979 Amidohydrolase family ISU62_11815 PF01695 IstB-like ATP binding protein ISU62_11820 PF00665 Integrase core domain ISU62_11820 PF02796 Helix-turn-helix domain of resolvase ISU62_11830 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU62_11835 PF04996 Succinylarginine dihydrolase ISU62_11840 PF00171 Aldehyde dehydrogenase family ISU62_11850 PF00202 Aminotransferase class-III ISU62_11855 PF00155 Aminotransferase class I and II ISU62_11855 PF00392 Bacterial regulatory proteins, gntR family ISU62_11865 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU62_11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_11865 PF00672 HAMP domain ISU62_11865 PF07730 Histidine kinase ISU62_11870 PF01699 Sodium/calcium exchanger protein ISU62_11875 PF02562 PhoH-like protein ISU62_11890 PF13994 PgaD-like protein ISU62_11895 PF00535 Glycosyl transferase family 2 ISU62_11900 PF14883 Hypothetical glycosyl hydrolase family 13 ISU62_11900 PF01522 Polysaccharide deacetylase ISU62_11910 PF00557 Metallopeptidase family M24 ISU62_11915 PF09313 Domain of unknown function (DUF1971) ISU62_11915 PF03848 Tellurite resistance protein TehB ISU62_11925 PF00578 AhpC/TSA family ISU62_11930 PF02687 FtsX-like permease family ISU62_11930 PF12704 MacB-like periplasmic core domain ISU62_11930 PF00005 ABC transporter ISU62_11940 PF00005 ABC transporter ISU62_11940 PF02687 FtsX-like permease family ISU62_11940 PF12704 MacB-like periplasmic core domain ISU62_11950 PF10634 Fe2+ transport protein ISU62_11955 PF03239 Iron permease FTR1 family ISU62_11970 PF04960 Glutaminase ISU62_11980 PF00455 DeoR C terminal sensor domain ISU62_11980 PF08220 DeoR-like helix-turn-helix domain ISU62_11985 PF00324 Amino acid permease ISU62_11990 PF00155 Aminotransferase class I and II ISU62_11995 PF02508 Rnf-Nqr subunit, membrane protein ISU62_12005 PF04909 Amidohydrolase ISU62_12010 PF07690 Major Facilitator Superfamily ISU62_12025 PF03466 LysR substrate binding domain ISU62_12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_12030 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU62_12035 PF01575 MaoC like domain ISU62_12040 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISU62_12040 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISU62_12045 PF00196 Bacterial regulatory proteins, luxR family ISU62_12045 PF00072 Response regulator receiver domain ISU62_12050 PF01627 Hpt domain ISU62_12050 PF00989 PAS fold ISU62_12050 PF00072 Response regulator receiver domain ISU62_12050 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_12050 PF00512 His Kinase A (phospho-acceptor) domain ISU62_12060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_12060 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_12065 PF00577 Outer membrane usher protein ISU62_12065 PF13954 PapC N-terminal domain ISU62_12065 PF13953 PapC C-terminal domain ISU62_12075 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_12075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_12085 PF00589 Phage integrase family ISU62_12085 PF13356 Arm DNA-binding domain ISU62_12090 PF00425 chorismate binding enzyme ISU62_12095 PF07690 Major Facilitator Superfamily ISU62_12100 PF00005 ABC transporter ISU62_12100 PF00664 ABC transporter transmembrane region ISU62_12105 PF00664 ABC transporter transmembrane region ISU62_12105 PF00005 ABC transporter ISU62_12105 PF08021 Siderophore-interacting FAD-binding domain ISU62_12105 PF04954 Siderophore-interacting protein ISU62_12115 PF00668 Condensation domain ISU62_12115 PF08242 Methyltransferase domain ISU62_12115 PF00550 Phosphopantetheine attachment site ISU62_12115 PF00501 AMP-binding enzyme ISU62_12120 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU62_12120 PF00698 Acyl transferase domain ISU62_12120 PF00668 Condensation domain ISU62_12120 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU62_12120 PF00550 Phosphopantetheine attachment site ISU62_12120 PF16197 Ketoacyl-synthetase C-terminal extension ISU62_12130 PF00975 Thioesterase domain ISU62_12135 PF13193 AMP-binding enzyme C-terminal domain ISU62_12135 PF00501 AMP-binding enzyme ISU62_12140 PF07715 TonB-dependent Receptor Plug Domain ISU62_12140 PF00593 TonB dependent receptor ISU62_12175 PF01695 IstB-like ATP binding protein ISU62_12180 PF02796 Helix-turn-helix domain of resolvase ISU62_12180 PF00665 Integrase core domain ISU62_12200 PF08402 TOBE domain ISU62_12200 PF00005 ABC transporter ISU62_12205 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_12210 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_12220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU62_12220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU62_12225 PF00392 Bacterial regulatory proteins, gntR family ISU62_12225 PF07702 UTRA domain ISU62_12295 PF05638 Type VI secretion system effector, Hcp ISU62_12340 PF01066 CDP-alcohol phosphatidyltransferase ISU62_12345 PF02151 UvrB/uvrC motif ISU62_12345 PF08459 UvrC Helix-hairpin-helix N-terminal ISU62_12345 PF01541 GIY-YIG catalytic domain ISU62_12355 PF10769 Protein of unknown function (DUF2594) ISU62_12360 PF06942 GlpM protein ISU62_12370 PF13505 Outer membrane protein beta-barrel domain ISU62_12380 PF00324 Amino acid permease ISU62_12385 PF01344 Kelch motif ISU62_12390 PF03358 NADPH-dependent FMN reductase ISU62_12395 PF04261 Dyp-type peroxidase family ISU62_12400 PF13473 Cupredoxin-like domain ISU62_12400 PF09375 Imelysin ISU62_12405 PF03239 Iron permease FTR1 family ISU62_12410 PF00474 Sodium:solute symporter family ISU62_12420 PF00171 Aldehyde dehydrogenase family ISU62_12420 PF01619 Proline dehydrogenase ISU62_12420 PF14850 DNA-binding domain of Proline dehydrogenase ISU62_12420 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU62_12435 PF00005 ABC transporter ISU62_12440 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_12445 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_12450 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_12455 PF02899 Phage integrase, N-terminal SAM-like domain ISU62_12460 PF04539 Sigma-70 region 3 ISU62_12460 PF04542 Sigma-70 region 2 ISU62_12460 PF04545 Sigma-70, region 4 ISU62_12465 PF00669 Bacterial flagellin N-terminal helical region ISU62_12465 PF00700 Bacterial flagellin C-terminal helical region ISU62_12465 PF08884 Flagellin D3 domain ISU62_12470 PF07196 Flagellin hook IN motif ISU62_12470 PF07195 Flagellar hook-associated protein 2 C-terminus ISU62_12470 PF02465 Flagellar hook-associated protein 2 N-terminus ISU62_12475 PF02561 Flagellar protein FliS ISU62_12480 PF05400 Flagellar protein FliT ISU62_12485 PF12833 Helix-turn-helix domain ISU62_12490 PF02743 Cache domain ISU62_12490 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU62_12490 PF00672 HAMP domain ISU62_12495 PF01966 HD domain ISU62_12500 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU62_12520 PF02049 Flagellar hook-basal body complex protein FliE ISU62_12525 PF01514 Secretory protein of YscJ/FliF family ISU62_12525 PF08345 Flagellar M-ring protein C-terminal ISU62_12530 PF01706 FliG C-terminal domain ISU62_12530 PF14841 FliG middle domain ISU62_12530 PF14842 FliG N-terminal domain ISU62_12535 PF02108 Flagellar assembly protein FliH ISU62_12540 PF18269 T3SS EscN ATPase C-terminal domain ISU62_12540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU62_12545 PF02050 Flagellar FliJ protein ISU62_12550 PF02120 Flagellar hook-length control protein FliK ISU62_12555 PF03748 Flagellar basal body-associated protein FliL ISU62_12560 PF02154 Flagellar motor switch protein FliM ISU62_12560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU62_12565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU62_12565 PF16973 Flagellar motor switch protein FliN N-terminal ISU62_12570 PF04347 Flagellar biosynthesis protein, FliO ISU62_12575 PF00813 FliP family ISU62_12580 PF01313 Bacterial export proteins, family 3 ISU62_12585 PF01311 Bacterial export proteins, family 1 ISU62_12600 PF00294 pfkB family carbohydrate kinase ISU62_12605 PF02653 Branched-chain amino acid transport system / permease component ISU62_12610 PF00005 ABC transporter ISU62_12615 PF13407 Periplasmic binding protein domain ISU62_12620 PF02653 Branched-chain amino acid transport system / permease component ISU62_12625 PF00596 Class II Aldolase and Adducin N-terminal domain ISU62_12630 PF04198 Putative sugar-binding domain ISU62_12635 PF00669 Bacterial flagellin N-terminal helical region ISU62_12640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_12640 PF00460 Flagella basal body rod protein ISU62_12645 PF10135 Rod binding protein ISU62_12645 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU62_12650 PF02119 Flagellar P-ring protein ISU62_12655 PF02107 Flagellar L-ring protein ISU62_12670 PF00460 Flagella basal body rod protein ISU62_12670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_12670 PF07559 Flagellar basal body protein FlaE ISU62_12675 PF13861 FlgD Tudor-like domain ISU62_12675 PF03963 Flagellar hook capping protein - N-terminal region ISU62_12675 PF13860 FlgD Ig-like domain ISU62_12680 PF00460 Flagella basal body rod protein ISU62_12680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU62_12685 PF00460 Flagella basal body rod protein ISU62_12690 PF17656 FlgA N-terminal domain ISU62_12690 PF13144 Chaperone for flagella basal body P-ring formation ISU62_12695 PF04316 Anti-sigma-28 factor, FlgM ISU62_12700 PF05130 FlgN protein ISU62_12720 PF06366 Flagellar protein FlhE ISU62_12725 PF00771 FHIPEP family ISU62_12730 PF01312 FlhB HrpN YscU SpaS Family ISU62_12745 PF10709 Protein of unknown function (DUF2511) ISU62_12755 PF04234 CopC domain ISU62_12760 PF00210 Ferritin-like domain ISU62_12765 PF06440 DNA polymerase III, theta subunit ISU62_12770 PF00561 alpha/beta hydrolase fold ISU62_12775 PF00326 Prolyl oligopeptidase family ISU62_12775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU62_12780 PF13995 YebF-like protein ISU62_12785 PF04266 ASCH domain ISU62_12790 PF07130 YebG protein ISU62_12795 PF00271 Helicase conserved C-terminal domain ISU62_12795 PF03880 DbpA RNA binding domain ISU62_12795 PF00270 DEAD/DEAH box helicase ISU62_12800 PF02222 ATP-grasp domain ISU62_12805 PF03701 Uncharacterised protein family (UPF0181) ISU62_12810 PF04715 Anthranilate synthase component I, N terminal region ISU62_12810 PF00425 chorismate binding enzyme ISU62_12815 PF00293 NUDIX domain ISU62_12820 PF03313 Serine dehydratase alpha chain ISU62_12820 PF03315 Serine dehydratase beta chain ISU62_12825 PF01613 Flavin reductase like domain ISU62_12830 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU62_12830 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU62_12835 PF07690 Major Facilitator Superfamily ISU62_12840 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU62_12845 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU62_12850 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU62_12855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU62_12860 PF00171 Aldehyde dehydrogenase family ISU62_12865 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU62_12870 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU62_12875 PF01047 MarR family ISU62_12885 PF03610 PTS system fructose IIA component ISU62_12885 PF03830 PTS system sorbose subfamily IIB component ISU62_12890 PF03609 PTS system sorbose-specific iic component ISU62_12895 PF03613 PTS system mannose/fructose/sorbose family IID component ISU62_12900 PF06173 Protein of unknown function (DUF986) ISU62_12905 PF02659 Putative manganese efflux pump ISU62_12910 PF07715 TonB-dependent Receptor Plug Domain ISU62_12910 PF00593 TonB dependent receptor ISU62_12915 PF00563 EAL domain ISU62_12915 PF00990 Diguanylate cyclase, GGDEF domain ISU62_12915 PF05231 MASE1 ISU62_12915 PF08447 PAS fold ISU62_12915 PF08448 PAS fold ISU62_12915 PF13426 PAS domain ISU62_12925 PF13847 Methyltransferase domain ISU62_12930 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU62_12935 PF00313 'Cold-shock' DNA-binding domain ISU62_12940 PF10736 Protein of unknown function (DUF2627) ISU62_12945 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU62_12950 PF00324 Amino acid permease ISU62_12965 PF13974 YebO-like protein ISU62_12970 PF13998 MgrB protein ISU62_12975 PF13996 YobH-like protein ISU62_12980 PF10964 Protein of unknown function (DUF2766) ISU62_12985 PF12833 Helix-turn-helix domain ISU62_12995 PF00005 ABC transporter ISU62_12995 PF00664 ABC transporter transmembrane region ISU62_13010 PF06167 Glucose-regulated metallo-peptidase M90 ISU62_13020 PF00356 Bacterial regulatory proteins, lacI family ISU62_13020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU62_13025 PF01695 IstB-like ATP binding protein ISU62_13030 PF00665 Integrase core domain ISU62_13030 PF02796 Helix-turn-helix domain of resolvase ISU62_13040 PF00872 Transposase, Mutator family ISU62_13045 PF01306 LacY proton/sugar symporter ISU62_13050 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU62_13050 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU62_13060 PF01648 4'-phosphopantetheinyl transferase superfamily ISU62_13060 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU62_13065 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU62_13075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU62_13080 PF00196 Bacterial regulatory proteins, luxR family ISU62_13080 PF00072 Response regulator receiver domain ISU62_13090 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU62_13100 PF01522 Polysaccharide deacetylase ISU62_13110 PF01554 MatE ISU62_13115 PF00764 Arginosuccinate synthase ISU62_13120 PF01070 FMN-dependent dehydrogenase ISU62_13125 PF13378 Enolase C-terminal domain-like ISU62_13125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU62_13130 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU62_13140 PF04134 Protein of unknown function, DUF393 ISU62_13145 PF07690 Major Facilitator Superfamily ISU62_13155 PF09134 Invasin, domain 3 ISU62_13155 PF02369 Bacterial Ig-like domain (group 1) ISU62_13155 PF11924 Inverse autotransporter, beta-domain ISU62_13160 PF00872 Transposase, Mutator family ISU62_13165 PF07883 Cupin domain ISU62_13170 PF04962 KduI/IolB family ISU62_13180 PF06917 Periplasmic pectate lyase ISU62_13185 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_13190 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_13195 PF03459 TOBE domain ISU62_13195 PF00005 ABC transporter ISU62_13195 PF17912 MalK OB fold domain ISU62_13200 PF01547 Bacterial extracellular solute-binding protein ISU62_13205 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU62_13210 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU62_13215 PF00375 Sodium:dicarboxylate symporter family ISU62_13220 PF01510 N-acetylmuramoyl-L-alanine amidase ISU62_13225 PF01614 Bacterial transcriptional regulator ISU62_13225 PF09339 IclR helix-turn-helix domain ISU62_13230 PF14583 Oligogalacturonate lyase ISU62_13235 PF07690 Major Facilitator Superfamily ISU62_13240 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_13240 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_13255 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_13255 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_13260 PF00419 Fimbrial protein ISU62_13265 PF01435 Peptidase family M48 ISU62_13270 PF17804 Tail specific protease N-terminal domain ISU62_13270 PF03572 Peptidase family S41 ISU62_13270 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU62_13270 PF00595 PDZ domain ISU62_13275 PF04352 ProQ/FINO family ISU62_13275 PF17516 ProQ C-terminal domain ISU62_13280 PF13185 GAF domain ISU62_13285 PF04403 Paraquat-inducible protein A ISU62_13290 PF02470 MlaD protein ISU62_13310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_13310 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_13325 PF07351 Protein of unknown function (DUF1480) ISU62_13335 PF02796 Helix-turn-helix domain of resolvase ISU62_13335 PF00665 Integrase core domain ISU62_13340 PF01695 IstB-like ATP binding protein ISU62_13350 PF13416 Bacterial extracellular solute-binding protein ISU62_13355 PF10722 Putative bacterial sensory transduction regulator ISU62_13360 PF07214 Protein of unknown function (DUF1418) ISU62_13365 PF00462 Glutaredoxin ISU62_13370 PF02080 TrkA-C domain ISU62_13370 PF06826 Predicted Permease Membrane Region ISU62_13380 PF01569 PAP2 superfamily ISU62_13385 PF01791 DeoC/LacD family aldolase ISU62_13390 PF00455 DeoR C terminal sensor domain ISU62_13390 PF08220 DeoR-like helix-turn-helix domain ISU62_13400 PF07943 Penicillin-binding protein 5, C-terminal domain ISU62_13400 PF00768 D-alanyl-D-alanine carboxypeptidase ISU62_13405 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_13410 PF00005 ABC transporter ISU62_13410 PF09383 NIL domain ISU62_13415 PF03180 NLPA lipoprotein ISU62_13430 PF00043 Glutathione S-transferase, C-terminal domain ISU62_13430 PF13417 Glutathione S-transferase, N-terminal domain ISU62_13435 PF07715 TonB-dependent Receptor Plug Domain ISU62_13435 PF00593 TonB dependent receptor ISU62_13440 PF00005 ABC transporter ISU62_13445 PF01032 FecCD transport family ISU62_13455 PF00324 Amino acid permease ISU62_13460 PF03466 LysR substrate binding domain ISU62_13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_13465 PF03601 Conserved hypothetical protein 698 ISU62_13470 PF01261 Xylose isomerase-like TIM barrel ISU62_13475 PF13954 PapC N-terminal domain ISU62_13475 PF13953 PapC C-terminal domain ISU62_13475 PF00577 Outer membrane usher protein ISU62_13480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_13480 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_13490 PF17550 Family of unknown function ISU62_13495 PF00486 Transcriptional regulatory protein, C terminal ISU62_13500 PF02378 Phosphotransferase system, EIIC ISU62_13500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU62_13505 PF00294 pfkB family carbohydrate kinase ISU62_13510 PF00381 PTS HPr component phosphorylation site ISU62_13510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU62_13515 PF00293 NUDIX domain ISU62_13520 PF02653 Branched-chain amino acid transport system / permease component ISU62_13525 PF00005 ABC transporter ISU62_13535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU62_13540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_13540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_13545 PF00171 Aldehyde dehydrogenase family ISU62_13555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU62_13555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU62_13555 PF01842 ACT domain ISU62_13570 PF03692 Putative zinc- or iron-chelating domain ISU62_13575 PF03222 Tryptophan/tyrosine permease family ISU62_13580 PF08207 Elongation factor P (EF-P) KOW-like domain ISU62_13580 PF01132 Elongation factor P (EF-P) OB domain ISU62_13580 PF09285 Elongation factor P, C-terminal ISU62_13585 PF03786 D-mannonate dehydratase (UxuA) ISU62_13590 PF01232 Mannitol dehydrogenase Rossmann domain ISU62_13590 PF08125 Mannitol dehydrogenase C-terminal domain ISU62_13595 PF07729 FCD domain ISU62_13595 PF00392 Bacterial regulatory proteins, gntR family ISU62_13600 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU62_13600 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU62_13605 PF01569 PAP2 superfamily ISU62_13610 PF00877 NlpC/P60 family ISU62_13615 PF00563 EAL domain ISU62_13615 PF12792 CSS motif domain associated with EAL ISU62_13620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_13625 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_13630 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_13630 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU62_13635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_13635 PF00005 ABC transporter ISU62_13640 PF13989 YejG-like protein ISU62_13645 PF07690 Major Facilitator Superfamily ISU62_13650 PF01479 S4 domain ISU62_13650 PF00849 RNA pseudouridylate synthase ISU62_13655 PF00271 Helicase conserved C-terminal domain ISU62_13655 PF04851 Type III restriction enzyme, res subunit ISU62_13660 PF01386 Ribosomal L25p family ISU62_13665 PF01797 Transposase IS200 like ISU62_13670 PF04245 37-kD nucleoid-associated bacterial protein ISU62_13675 PF07208 Protein of unknown function (DUF1414) ISU62_13680 PF11893 Domain of unknown function (DUF3413) ISU62_13680 PF00884 Sulfatase ISU62_13695 PF05638 Type VI secretion system effector, Hcp ISU62_13715 PF00232 Glycosyl hydrolase family 1 ISU62_13720 PF01418 Helix-turn-helix domain, rpiR family ISU62_13720 PF01380 SIS domain ISU62_13725 PF07484 Phage Tail Collar Domain ISU62_13740 PF04865 Baseplate J-like protein ISU62_13780 PF17482 Phage tail sheath C-terminal domain ISU62_13780 PF04984 Phage tail sheath protein subtilisin-like domain ISU62_13800 PF01261 Xylose isomerase-like TIM barrel ISU62_13805 PF00455 DeoR C terminal sensor domain ISU62_13805 PF08220 DeoR-like helix-turn-helix domain ISU62_13815 PF07005 Sugar-binding N-terminal domain ISU62_13815 PF17042 Nucleotide-binding C-terminal domain ISU62_13820 PF06530 Phage antitermination protein Q ISU62_13825 PF01381 Helix-turn-helix ISU62_13825 PF00717 Peptidase S24-like ISU62_13830 PF06183 DinI-like family ISU62_13835 PF01278 Omptin family ISU62_13840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU62_13840 PF02743 Cache domain ISU62_13840 PF00672 HAMP domain ISU62_13845 PF12706 Beta-lactamase superfamily domain ISU62_13855 PF00144 Beta-lactamase ISU62_13875 PF00267 Gram-negative porin ISU62_13880 PF07690 Major Facilitator Superfamily ISU62_13885 PF16359 RcsD-ABL domain ISU62_13885 PF01627 Hpt domain ISU62_13885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_13890 PF16359 RcsD-ABL domain ISU62_13890 PF01627 Hpt domain ISU62_13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_13895 PF00196 Bacterial regulatory proteins, luxR family ISU62_13895 PF00072 Response regulator receiver domain ISU62_13900 PF00072 Response regulator receiver domain ISU62_13900 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU62_13900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_13900 PF00512 His Kinase A (phospho-acceptor) domain ISU62_13905 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU62_13905 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU62_13915 PF02867 Ribonucleotide reductase, barrel domain ISU62_13915 PF00317 Ribonucleotide reductase, all-alpha domain ISU62_13915 PF03477 ATP cone domain ISU62_13920 PF00268 Ribonucleotide reductase, small chain ISU62_13925 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU62_13930 PF03974 Ecotin ISU62_13935 PF00994 Probable molybdopterin binding domain ISU62_13940 PF03222 Tryptophan/tyrosine permease family ISU62_13945 PF07437 YfaZ precursor ISU62_13950 PF00199 Catalase ISU62_13950 PF06628 Catalase-related immune-responsive ISU62_13955 PF06733 DEAD_2 ISU62_13955 PF13307 Helicase C-terminal domain ISU62_13960 PF00267 Gram-negative porin ISU62_13965 PF00892 EamA-like transporter family ISU62_13975 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU62_13975 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU62_13975 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU62_13980 PF13520 Amino acid permease ISU62_13985 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_13990 PF00005 ABC transporter ISU62_13995 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_14005 PF00581 Rhodanese-like domain ISU62_14025 PF00005 ABC transporter ISU62_14030 PF02653 Branched-chain amino acid transport system / permease component ISU62_14035 PF02653 Branched-chain amino acid transport system / permease component ISU62_14040 PF02954 Bacterial regulatory protein, Fis family ISU62_14040 PF13188 PAS domain ISU62_14040 PF00158 Sigma-54 interaction domain ISU62_14045 PF07308 Protein of unknown function (DUF1456) ISU62_14050 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_14055 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_14065 PF00005 ABC transporter ISU62_14070 PF04226 Transglycosylase associated protein ISU62_14080 PF01844 HNH endonuclease ISU62_14085 PF01928 CYTH domain ISU62_14090 PF01565 FAD binding domain ISU62_14090 PF09330 D-lactate dehydrogenase, membrane binding ISU62_14095 PF00768 D-alanyl-D-alanine carboxypeptidase ISU62_14105 PF01207 Dihydrouridine synthase (Dus) ISU62_14130 PF00872 Transposase, Mutator family ISU62_14165 PF00270 DEAD/DEAH box helicase ISU62_14165 PF00271 Helicase conserved C-terminal domain ISU62_14170 PF00440 Bacterial regulatory proteins, tetR family ISU62_14170 PF09209 Tetracyclin repressor-like, C-terminal domain ISU62_14175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_14180 PF00005 ABC transporter ISU62_14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_14205 PF03466 LysR substrate binding domain ISU62_14210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU62_14215 PF02954 Bacterial regulatory protein, Fis family ISU62_14215 PF00072 Response regulator receiver domain ISU62_14215 PF00158 Sigma-54 interaction domain ISU62_14220 PF00512 His Kinase A (phospho-acceptor) domain ISU62_14220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_14225 PF13801 Heavy-metal resistance ISU62_14240 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU62_14245 PF02391 MoaE protein ISU62_14250 PF02597 ThiS family ISU62_14255 PF01967 MoaC family ISU62_14260 PF06463 Molybdenum Cofactor Synthesis C ISU62_14260 PF04055 Radical SAM superfamily ISU62_14265 PF01933 Uncharacterised protein family UPF0052 ISU62_14270 PF09905 DNA-binding protein VF530 ISU62_14275 PF00271 Helicase conserved C-terminal domain ISU62_14275 PF12344 Ultra-violet resistance protein B ISU62_14275 PF02151 UvrB/uvrC motif ISU62_14275 PF17757 UvrB interaction domain ISU62_14275 PF04851 Type III restriction enzyme, res subunit ISU62_14280 PF00005 ABC transporter ISU62_14280 PF09383 NIL domain ISU62_14290 PF08241 Methyltransferase domain ISU62_14300 PF06968 Biotin and Thiamin Synthesis associated domain ISU62_14300 PF04055 Radical SAM superfamily ISU62_14305 PF00202 Aminotransferase class-III ISU62_14310 PF10282 Lactonase, 7-bladed beta-propeller ISU62_14320 PF03459 TOBE domain ISU62_14320 PF00005 ABC transporter ISU62_14325 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_14335 PF10766 Multidrug efflux pump-associated protein AcrZ ISU62_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_14340 PF03459 TOBE domain ISU62_14345 PF00005 ABC transporter ISU62_14355 PF16363 GDP-mannose 4,6 dehydratase ISU62_14360 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU62_14360 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU62_14365 PF10509 Galactokinase galactose-binding signature ISU62_14365 PF08544 GHMP kinases C terminal ISU62_14365 PF00288 GHMP kinases N terminal domain ISU62_14375 PF01263 Aldose 1-epimerase ISU62_14385 PF00300 Histidine phosphatase superfamily (branch 1) ISU62_14390 PF00793 DAHP synthetase I family ISU62_14395 PF01545 Cation efflux family ISU62_14400 PF04973 Nicotinamide mononucleotide transporter ISU62_14405 PF02445 Quinolinate synthetase A protein ISU62_14425 PF16331 TolA binding protein trimerisation ISU62_14425 PF13174 Tetratricopeptide repeat ISU62_14430 PF00691 OmpA family ISU62_14435 PF04052 TolB amino-terminal domain ISU62_14435 PF07676 WD40-like Beta Propeller Repeat ISU62_14440 PF06519 TolA C-terminal ISU62_14440 PF06519 TolA C-terminal ISU62_14445 PF02472 Biopolymer transport protein ExbD/TolR ISU62_14450 PF01618 MotA/TolQ/ExbB proton channel family ISU62_14455 PF03061 Thioesterase superfamily ISU62_14460 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU62_14465 PF08173 Membrane bound YbgT-like protein ISU62_14470 PF02322 Cytochrome bd terminal oxidase subunit II ISU62_14475 PF01654 Cytochrome bd terminal oxidase subunit I ISU62_14480 PF02629 CoA binding domain ISU62_14480 PF00549 CoA-ligase ISU62_14485 PF00549 CoA-ligase ISU62_14485 PF08442 ATP-grasp domain ISU62_14490 PF00364 Biotin-requiring enzyme ISU62_14490 PF02817 e3 binding domain ISU62_14490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU62_14495 PF16078 2-oxoglutarate dehydrogenase N-terminus ISU62_14495 PF00676 Dehydrogenase E1 component ISU62_14495 PF16870 2-oxoglutarate dehydrogenase C-terminal ISU62_14495 PF02779 Transketolase, pyrimidine binding domain ISU62_14500 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU62_14505 PF00890 FAD binding domain ISU62_14505 PF02910 Fumarate reductase flavoprotein C-term ISU62_14510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU62_14515 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU62_14520 PF00285 Citrate synthase, C-terminal domain ISU62_14525 PF01025 GrpE ISU62_14530 PF01513 ATP-NAD kinase ISU62_14535 PF02463 RecF/RecN/SMC N terminal domain ISU62_14540 PF04355 SmpA / OmlA family ISU62_14545 PF03658 RnfH family Ubiquitin ISU62_14550 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU62_14555 PF01668 SmpB protein ISU62_14570 PF02796 Helix-turn-helix domain of resolvase ISU62_14570 PF00665 Integrase core domain ISU62_14575 PF01695 IstB-like ATP binding protein ISU62_14590 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU62_14600 PF00929 Exonuclease ISU62_14605 PF00075 RNase H ISU62_14610 PF08241 Methyltransferase domain ISU62_14615 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU62_14615 PF00753 Metallo-beta-lactamase superfamily ISU62_14620 PF01476 LysM domain ISU62_14620 PF01464 Transglycosylase SLT domain ISU62_14625 PF03372 Endonuclease/Exonuclease/phosphatase family ISU62_14635 PF00248 Aldo/keto reductase family ISU62_14670 PF00005 ABC transporter ISU62_14670 PF09383 NIL domain ISU62_14675 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_14680 PF03180 NLPA lipoprotein ISU62_14685 PF16358 RcsF lipoprotein ISU62_14690 PF01980 tRNA-methyltransferase O ISU62_14690 PF18389 TrmO C-terminal domain ISU62_14695 PF03129 Anticodon binding domain ISU62_14695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU62_14695 PF04073 Aminoacyl-tRNA editing domain ISU62_14700 PF04170 NlpE N-terminal domain ISU62_14700 PF17185 NlpE C-terminal OB domain ISU62_14705 PF00472 RF-1 domain ISU62_14710 PF07152 YaeQ protein ISU62_14715 PF06786 Uncharacterised protein family (UPF0253) ISU62_14720 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU62_14725 PF00034 Cytochrome c ISU62_14730 PF01171 PP-loop family ISU62_14730 PF09179 TilS substrate binding domain ISU62_14730 PF11734 TilS substrate C-terminal domain ISU62_14735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU62_14740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU62_14745 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU62_14745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU62_14745 PF14579 Helix-hairpin-helix motif ISU62_14745 PF02811 PHP domain ISU62_14745 PF01336 OB-fold nucleic acid binding domain ISU62_14750 PF01351 Ribonuclease HII ISU62_14755 PF02684 Lipid-A-disaccharide synthetase ISU62_14760 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU62_14760 PF00132 Bacterial transferase hexapeptide (six repeats) ISU62_14765 PF07977 FabA-like domain ISU62_14770 PF00132 Bacterial transferase hexapeptide (six repeats) ISU62_14770 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU62_14775 PF03938 Outer membrane protein (OmpH-like) ISU62_14780 PF01103 Surface antigen ISU62_14780 PF07244 Surface antigen variable number repeat ISU62_14785 PF17820 PDZ domain ISU62_14785 PF02163 Peptidase family M50 ISU62_14795 PF01255 Putative undecaprenyl diphosphate synthase ISU62_14800 PF13288 DXP reductoisomerase C-terminal domain ISU62_14800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU62_14800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU62_14805 PF01765 Ribosome recycling factor ISU62_14810 PF00696 Amino acid kinase family ISU62_14815 PF00889 Elongation factor TS ISU62_14820 PF00318 Ribosomal protein S2 ISU62_14825 PF00557 Metallopeptidase family M24 ISU62_14830 PF01842 ACT domain ISU62_14830 PF08335 GlnD PII-uridylyltransferase ISU62_14830 PF01966 HD domain ISU62_14830 PF01909 Nucleotidyltransferase domain ISU62_14835 PF14602 Hexapeptide repeat of succinyl-transferase ISU62_14835 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU62_14835 PF00132 Bacterial transferase hexapeptide (six repeats) ISU62_14840 PF11944 Protein of unknown function (DUF3461) ISU62_14845 PF00258 Flavodoxin ISU62_14850 PF00849 RNA pseudouridylate synthase ISU62_14855 PF04287 tRNA pseudouridine synthase C ISU62_14860 PF01797 Transposase IS200 like ISU62_14870 PF07348 Syd protein (SUKH-2) ISU62_14875 PF14489 QueF-like protein ISU62_14875 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU62_14880 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU62_14880 PF03641 Possible lysine decarboxylase ISU62_14880 PF11892 Domain of unknown function (DUF3412) ISU62_14885 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU62_14885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU62_14890 PF01728 FtsJ-like methyltransferase ISU62_14890 PF18125 RlmM ferredoxin-like domain ISU62_14895 PF04241 Protein of unknown function (DUF423) ISU62_14900 PF03466 LysR substrate binding domain ISU62_14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_14910 PF00266 Aminotransferase class-V ISU62_14915 PF02657 Fe-S metabolism associated domain ISU62_14920 PF00899 ThiF family ISU62_14925 PF06725 3D domain ISU62_14925 PF03562 MltA specific insert domain ISU62_14940 PF11741 AMIN domain ISU62_14940 PF01520 N-acetylmuramoyl-L-alanine amidase ISU62_14945 PF00696 Amino acid kinase family ISU62_14945 PF00583 Acetyltransferase (GNAT) family ISU62_14950 PF13538 UvrD-like helicase C-terminal domain ISU62_14955 PF12705 PD-(D/E)XK nuclease superfamily ISU62_14955 PF00580 UvrD/REP helicase N-terminal domain ISU62_14955 PF13361 UvrD-like helicase C-terminal domain ISU62_14960 PF00675 Insulinase (Peptidase family M16) ISU62_14960 PF05193 Peptidase M16 inactive domain ISU62_14960 PF16187 Middle or third domain of peptidase_M16 ISU62_14965 PF17946 RecC C-terminal domain ISU62_14990 PF00303 Thymidylate synthase ISU62_14995 PF01790 Prolipoprotein diacylglyceryl transferase ISU62_15000 PF02896 PEP-utilising enzyme, TIM barrel domain ISU62_15000 PF00391 PEP-utilising enzyme, mobile domain ISU62_15000 PF05524 PEP-utilising enzyme, N-terminal ISU62_15000 PF01590 GAF domain ISU62_15005 PF00293 NUDIX domain ISU62_15010 PF02976 DNA mismatch repair enzyme MutH ISU62_15015 PF00248 Aldo/keto reductase family ISU62_15030 PF07690 Major Facilitator Superfamily ISU62_15035 PF01553 Acyltransferase ISU62_15035 PF00501 AMP-binding enzyme ISU62_15035 PF13193 AMP-binding enzyme C-terminal domain ISU62_15040 PF00384 Molybdopterin oxidoreductase ISU62_15040 PF01568 Molydopterin dinucleotide binding domain ISU62_15045 PF00356 Bacterial regulatory proteins, lacI family ISU62_15050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU62_15050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU62_15055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_15055 PF03466 LysR substrate binding domain ISU62_15060 PF07690 Major Facilitator Superfamily ISU62_15065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_15065 PF03466 LysR substrate binding domain ISU62_15080 PF02203 Tar ligand binding domain homologue ISU62_15080 PF00672 HAMP domain ISU62_15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU62_15100 PF06750 Bacterial Peptidase A24 N-terminal domain ISU62_15100 PF01478 Type IV leader peptidase family ISU62_15120 PF07963 Prokaryotic N-terminal methylation motif ISU62_15120 PF11612 Type II secretion system (T2SS), protein J ISU62_15125 PF07963 Prokaryotic N-terminal methylation motif ISU62_15125 PF02501 Type II secretion system (T2SS), protein I ISU62_15135 PF07963 Prokaryotic N-terminal methylation motif ISU62_15135 PF08334 Type II secretion system (T2SS), protein G ISU62_15145 PF00437 Type II/IV secretion system protein ISU62_15150 PF03958 Bacterial type II/III secretion system short domain ISU62_15150 PF00263 Bacterial type II and III secretion system protein ISU62_15165 PF00484 Carbonic anhydrase ISU62_15185 PF09092 Lyase, N terminal ISU62_15185 PF09093 Lyase, catalytic ISU62_15185 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU62_15185 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU62_15200 PF01797 Transposase IS200 like ISU62_15205 PF00884 Sulfatase ISU62_15210 PF00455 DeoR C terminal sensor domain ISU62_15210 PF08220 DeoR-like helix-turn-helix domain ISU62_15215 PF08013 Tagatose 6 phosphate kinase ISU62_15220 PF01380 SIS domain ISU62_15225 PF03830 PTS system sorbose subfamily IIB component ISU62_15230 PF03609 PTS system sorbose-specific iic component ISU62_15235 PF03613 PTS system mannose/fructose/sorbose family IID component ISU62_15240 PF03610 PTS system fructose IIA component ISU62_15245 PF01979 Amidohydrolase family ISU62_15255 PF07470 Glycosyl Hydrolase Family 88 ISU62_15260 PF04055 Radical SAM superfamily ISU62_15260 PF13186 Iron-sulfur cluster-binding domain ISU62_15265 PF00884 Sulfatase ISU62_15275 PF01116 Fructose-bisphosphate aldolase class-II ISU62_15285 PF00356 Bacterial regulatory proteins, lacI family ISU62_15290 PF07690 Major Facilitator Superfamily ISU62_15295 PF16338 Domain of unknown function (DUF4968) ISU62_15295 PF17137 Domain of unknown function (DUF5110) ISU62_15295 PF13802 Galactose mutarotase-like ISU62_15295 PF01055 Glycosyl hydrolases family 31 ISU62_15300 PF00356 Bacterial regulatory proteins, lacI family ISU62_15305 PF02264 LamB porin ISU62_15310 PF02378 Phosphotransferase system, EIIC ISU62_15310 PF00367 phosphotransferase system, EIIB ISU62_15315 PF08533 Beta-galactosidase C-terminal domain ISU62_15315 PF02449 Beta-galactosidase ISU62_15315 PF08532 Beta-galactosidase trimerisation domain ISU62_15320 PF07745 Glycosyl hydrolase family 53 ISU62_15325 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_15330 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_15335 PF13416 Bacterial extracellular solute-binding protein ISU62_15340 PF17912 MalK OB fold domain ISU62_15340 PF00005 ABC transporter ISU62_15345 PF00005 ABC transporter ISU62_15350 PF02653 Branched-chain amino acid transport system / permease component ISU62_15355 PF13407 Periplasmic binding protein domain ISU62_15365 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU62_15370 PF03551 Transcriptional regulator PadR-like family ISU62_15460 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU62_15465 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU62_15485 PF13356 Arm DNA-binding domain ISU62_15485 PF00589 Phage integrase family ISU62_15485 PF14659 Phage integrase, N-terminal SAM-like domain ISU62_15495 PF00152 tRNA synthetases class II (D, K and N) ISU62_15495 PF01336 OB-fold nucleic acid binding domain ISU62_15505 PF02272 DHHA1 domain ISU62_15505 PF17768 RecJ OB domain ISU62_15505 PF01368 DHH family ISU62_15510 PF13098 Thioredoxin-like domain ISU62_15510 PF10411 Disulfide bond isomerase protein N-terminus ISU62_15515 PF00589 Phage integrase family ISU62_15515 PF02899 Phage integrase, N-terminal SAM-like domain ISU62_15520 PF00258 Flavodoxin ISU62_15525 PF06123 Inner membrane protein CreD ISU62_15530 PF00512 His Kinase A (phospho-acceptor) domain ISU62_15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_15530 PF00672 HAMP domain ISU62_15535 PF00072 Response regulator receiver domain ISU62_15535 PF00486 Transcriptional regulatory protein, C terminal ISU62_15540 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU62_15545 PF03937 Flavinator of succinate dehydrogenase ISU62_15550 PF01571 Aminomethyltransferase folate-binding domain ISU62_15560 PF03006 Haemolysin-III related ISU62_15590 PF02347 Glycine cleavage system P-protein ISU62_15595 PF01597 Glycine cleavage H-protein ISU62_15600 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU62_15600 PF01571 Aminomethyltransferase folate-binding domain ISU62_15605 PF01494 FAD binding domain ISU62_15610 PF01494 FAD binding domain ISU62_15615 PF00557 Metallopeptidase family M24 ISU62_15615 PF05195 Aminopeptidase P, N-terminal domain ISU62_15620 PF03695 Uncharacterised protein family (UPF0149) ISU62_15625 PF05164 Cell division protein ZapA ISU62_15635 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU62_15645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU62_15645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU62_15645 PF01842 ACT domain ISU62_15650 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU62_15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_15655 PF03466 LysR substrate binding domain ISU62_15660 PF04402 Protein of unknown function (DUF541) ISU62_15665 PF01810 LysE type translocator ISU62_15670 PF05552 Conserved TM helix ISU62_15670 PF00924 Mechanosensitive ion channel ISU62_15680 PF01116 Fructose-bisphosphate aldolase class-II ISU62_15685 PF00162 Phosphoglycerate kinase ISU62_15690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU62_15690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU62_15700 PF01695 IstB-like ATP binding protein ISU62_15705 PF00665 Integrase core domain ISU62_15705 PF02796 Helix-turn-helix domain of resolvase ISU62_15715 PF02779 Transketolase, pyrimidine binding domain ISU62_15715 PF02780 Transketolase, C-terminal domain ISU62_15715 PF00456 Transketolase, thiamine diphosphate binding domain ISU62_15720 PF01435 Peptidase family M48 ISU62_15730 PF00355 Rieske [2Fe-2S] domain ISU62_15735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU62_15735 PF17810 Arginine decarboxylase helical bundle domain ISU62_15735 PF17944 Arginine decarboxylase C-terminal helical extension ISU62_15740 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU62_15740 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU62_15740 PF02772 S-adenosylmethionine synthetase, central domain ISU62_15745 PF17283 SprT-like zinc ribbon domain ISU62_15745 PF10263 SprT-like family ISU62_15750 PF04231 Endonuclease I ISU62_15755 PF04452 RNA methyltransferase ISU62_15760 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU62_15760 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU62_15765 PF02622 Uncharacterized ACR, COG1678 ISU62_15770 PF03652 Holliday junction resolvase ISU62_15775 PF00795 Carbon-nitrogen hydrolase ISU62_15780 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU62_15785 PF00437 Type II/IV secretion system protein ISU62_15790 PF01168 Alanine racemase, N-terminal domain ISU62_15795 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU62_15795 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU62_15800 PF02325 YGGT family ISU62_15805 PF02594 Uncharacterised ACR, YggU family COG1872 ISU62_15810 PF01725 Ham1 family ISU62_15815 PF06969 HemN C-terminal domain ISU62_15815 PF04055 Radical SAM superfamily ISU62_15840 PF04960 Glutaminase ISU62_15845 PF04320 Protein with unknown function (DUF469) ISU62_15850 PF02390 Putative methyltransferase ISU62_15855 PF14815 NUDIX domain ISU62_15855 PF10576 Iron-sulfur binding domain of endonuclease III ISU62_15855 PF00633 Helix-hairpin-helix motif ISU62_15855 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU62_15860 PF04362 Bacterial Fe(2+) trafficking ISU62_15865 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU62_15865 PF01464 Transglycosylase SLT domain ISU62_15875 PF07715 TonB-dependent Receptor Plug Domain ISU62_15880 PF02653 Branched-chain amino acid transport system / permease component ISU62_15885 PF00005 ABC transporter ISU62_15890 PF13407 Periplasmic binding protein domain ISU62_15895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU62_15895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU62_15895 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU62_15955 PF13296 Putative type VI secretion system Rhs element Vgr ISU62_15955 PF04717 Type VI secretion system, phage-baseplate injector ISU62_15955 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU62_15985 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU62_16005 PF02517 CPBP intramembrane metalloprotease ISU62_16010 PF00765 Autoinducer synthase ISU62_16015 PF03472 Autoinducer binding domain ISU62_16015 PF00196 Bacterial regulatory proteins, luxR family ISU62_16050 PF06276 Ferric iron reductase FhuF-like transporter ISU62_16050 PF04183 IucA / IucC family ISU62_16055 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU62_16060 PF07715 TonB-dependent Receptor Plug Domain ISU62_16060 PF00593 TonB dependent receptor ISU62_16075 PF00563 EAL domain ISU62_16075 PF00990 Diguanylate cyclase, GGDEF domain ISU62_16075 PF08447 PAS fold ISU62_16075 PF08448 PAS fold ISU62_16085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_16085 PF00529 HlyD membrane-fusion protein of T1SS ISU62_16090 PF00873 AcrB/AcrD/AcrF family ISU62_16095 PF07906 ShET2 enterotoxin, N-terminal region ISU62_16105 PF03797 Autotransporter beta-domain ISU62_16110 PF12468 Type III secretion system leucine rich repeat protein ISU62_16110 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU62_16120 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU62_16120 PF12468 Type III secretion system leucine rich repeat protein ISU62_16120 PF12468 Type III secretion system leucine rich repeat protein ISU62_16120 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU62_16125 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU62_16125 PF12468 Type III secretion system leucine rich repeat protein ISU62_16130 PF03806 AbgT putative transporter family ISU62_16135 PF07687 Peptidase dimerisation domain ISU62_16135 PF01546 Peptidase family M20/M25/M40 ISU62_16140 PF07715 TonB-dependent Receptor Plug Domain ISU62_16140 PF00593 TonB dependent receptor ISU62_16155 PF01695 IstB-like ATP binding protein ISU62_16165 PF01817 Chorismate mutase type II ISU62_16165 PF02153 Prephenate dehydrogenase ISU62_16170 PF00793 DAHP synthetase I family ISU62_16175 PF04397 LytTr DNA-binding domain ISU62_16175 PF00072 Response regulator receiver domain ISU62_16185 PF04338 Protein of unknown function, DUF481 ISU62_16195 PF01245 Ribosomal protein L19 ISU62_16200 PF01746 tRNA (Guanine-1)-methyltransferase ISU62_16205 PF05239 PRC-barrel domain ISU62_16205 PF01782 RimM N-terminal domain ISU62_16210 PF00886 Ribosomal protein S16 ISU62_16215 PF00448 SRP54-type protein, GTPase domain ISU62_16215 PF02978 Signal peptide binding domain ISU62_16215 PF02881 SRP54-type protein, helical bundle domain ISU62_16220 PF01578 Cytochrome C assembly protein ISU62_16225 PF03471 Transporter associated domain ISU62_16225 PF01595 Cyclin M transmembrane N-terminal domain ISU62_16225 PF00571 CBS domain ISU62_16235 PF02664 S-Ribosylhomocysteinase (LuxS) ISU62_16240 PF04262 Glutamate-cysteine ligase ISU62_16245 PF09335 SNARE associated Golgi protein ISU62_16250 PF13419 Haloacid dehalogenase-like hydrolase ISU62_16280 PF02599 Global regulator protein family ISU62_16285 PF02272 DHHA1 domain ISU62_16285 PF01411 tRNA synthetases class II (A) ISU62_16285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU62_16290 PF02631 RecX family ISU62_16295 PF00154 recA bacterial DNA recombination protein ISU62_16300 PF02464 Competence-damaged protein ISU62_16305 PF07690 Major Facilitator Superfamily ISU62_16320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_16320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_16325 PF02779 Transketolase, pyrimidine binding domain ISU62_16325 PF02780 Transketolase, C-terminal domain ISU62_16330 PF00456 Transketolase, thiamine diphosphate binding domain ISU62_16335 PF02653 Branched-chain amino acid transport system / permease component ISU62_16340 PF00005 ABC transporter ISU62_16350 PF13407 Periplasmic binding protein domain ISU62_16355 PF00141 Peroxidase ISU62_16360 PF07361 Cytochrome b562 ISU62_16365 PF01292 Prokaryotic cytochrome b561 ISU62_16370 PF02613 Nitrate reductase delta subunit ISU62_16375 PF04976 DMSO reductase anchor subunit (DmsC) ISU62_16380 PF13247 4Fe-4S dicluster domain ISU62_16380 PF12800 4Fe-4S binding domain ISU62_16385 PF00384 Molybdopterin oxidoreductase ISU62_16385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU62_16385 PF01568 Molydopterin dinucleotide binding domain ISU62_16390 PF00596 Class II Aldolase and Adducin N-terminal domain ISU62_16395 PF08220 DeoR-like helix-turn-helix domain ISU62_16395 PF00455 DeoR C terminal sensor domain ISU62_16405 PF01797 Transposase IS200 like ISU62_16410 PF00005 ABC transporter ISU62_16415 PF02653 Branched-chain amino acid transport system / permease component ISU62_16420 PF02653 Branched-chain amino acid transport system / permease component ISU62_16425 PF01261 Xylose isomerase-like TIM barrel ISU62_16430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_16430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_16435 PF05681 Fumarate hydratase (Fumerase) ISU62_16435 PF05683 Fumarase C-terminus ISU62_16445 PF00557 Metallopeptidase family M24 ISU62_16455 PF07715 TonB-dependent Receptor Plug Domain ISU62_16455 PF00593 TonB dependent receptor ISU62_16465 PF00034 Cytochrome c ISU62_16465 PF03150 Di-haem cytochrome c peroxidase ISU62_16465 PF14376 Haem-binding domain ISU62_16470 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_16485 PF01022 Bacterial regulatory protein, arsR family ISU62_16490 PF02040 Arsenical pump membrane protein ISU62_16495 PF13936 Helix-turn-helix domain ISU62_16495 PF04198 Putative sugar-binding domain ISU62_16500 PF02734 DAK2 domain ISU62_16505 PF02733 Dak1 domain ISU62_16515 PF00107 Zinc-binding dehydrogenase ISU62_16515 PF08240 Alcohol dehydrogenase GroES-like domain ISU62_16520 PF02502 Ribose/Galactose Isomerase ISU62_16525 PF01624 MutS domain I ISU62_16525 PF05188 MutS domain II ISU62_16525 PF00488 MutS domain V ISU62_16525 PF05192 MutS domain III ISU62_16525 PF05190 MutS family domain IV ISU62_16530 PF04539 Sigma-70 region 3 ISU62_16530 PF04545 Sigma-70, region 4 ISU62_16530 PF00140 Sigma-70 factor, region 1.2 ISU62_16530 PF04542 Sigma-70 region 2 ISU62_16535 PF01476 LysM domain ISU62_16535 PF01551 Peptidase family M23 ISU62_16545 PF01975 Survival protein SurE ISU62_16550 PF01142 tRNA pseudouridine synthase D (TruD) ISU62_16555 PF02542 YgbB family ISU62_16560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU62_16565 PF04977 Septum formation initiator ISU62_16570 PF12084 Protein of unknown function (DUF3561) ISU62_16580 PF00009 Elongation factor Tu GTP binding domain ISU62_16585 PF01507 Phosphoadenosine phosphosulfate reductase family ISU62_16590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU62_16590 PF10414 Sirohaem synthase dimerisation region ISU62_16590 PF14824 Sirohaem biosynthesis protein central ISU62_16620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU62_16620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU62_16625 PF00667 FAD binding domain ISU62_16625 PF00258 Flavodoxin ISU62_16625 PF00175 Oxidoreductase NAD-binding domain ISU62_16630 PF01242 6-pyruvoyl tetrahydropterin synthase ISU62_16635 PF04055 Radical SAM superfamily ISU62_16640 PF00080 Copper/zinc superoxide dismutase (SODC) ISU62_16645 PF00113 Enolase, C-terminal TIM barrel domain ISU62_16645 PF03952 Enolase, N-terminal domain ISU62_16650 PF06418 CTP synthase N-terminus ISU62_16650 PF00117 Glutamine amidotransferase class-I ISU62_16655 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU62_16660 PF02824 TGS domain ISU62_16660 PF04607 Region found in RelA / SpoT proteins ISU62_16660 PF13291 ACT domain ISU62_16665 PF01938 TRAM domain ISU62_16665 PF05958 tRNA (Uracil-5-)-methyltransferase ISU62_16675 PF00672 HAMP domain ISU62_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_16675 PF00512 His Kinase A (phospho-acceptor) domain ISU62_16675 PF01627 Hpt domain ISU62_16675 PF00072 Response regulator receiver domain ISU62_16675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU62_16680 PF00595 PDZ domain ISU62_16685 PF01966 HD domain ISU62_16685 PF13286 Phosphohydrolase-associated domain ISU62_16690 PF01048 Phosphorylase superfamily ISU62_16695 PF01497 Periplasmic binding protein ISU62_16700 PF03458 UPF0126 domain ISU62_16705 PF01521 Iron-sulphur cluster biosynthesis ISU62_16710 PF00654 Voltage gated chloride channel ISU62_16715 PF00202 Aminotransferase class-III ISU62_16720 PF01032 FecCD transport family ISU62_16725 PF01497 Periplasmic binding protein ISU62_16730 PF00005 ABC transporter ISU62_16735 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU62_16735 PF00912 Transglycosylase ISU62_16735 PF00905 Penicillin binding protein transpeptidase domain ISU62_16735 PF14814 Bifunctional transglycosylase second domain ISU62_16740 PF00270 DEAD/DEAH box helicase ISU62_16740 PF04408 Helicase associated domain (HA2) ISU62_16740 PF00271 Helicase conserved C-terminal domain ISU62_16740 PF08482 ATP-dependent helicase C-terminal ISU62_16745 PF02834 LigT like Phosphoesterase ISU62_16750 PF03749 Sugar fermentation stimulation protein RE domain ISU62_16750 PF17746 SfsA N-terminal OB domain ISU62_16755 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU62_16760 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU62_16765 PF01743 Poly A polymerase head domain ISU62_16765 PF12626 Polymerase A arginine-rich C-terminus ISU62_16765 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU62_16770 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU62_16775 PF02548 Ketopantoate hydroxymethyltransferase ISU62_16780 PF02569 Pantoate-beta-alanine ligase ISU62_16785 PF02261 Aspartate decarboxylase ISU62_16795 PF01061 ABC-2 type transporter ISU62_16800 PF00005 ABC transporter ISU62_16805 PF00484 Carbonic anhydrase ISU62_16810 PF00156 Phosphoribosyl transferase domain ISU62_16815 PF07732 Multicopper oxidase ISU62_16815 PF00394 Multicopper oxidase ISU62_16815 PF07731 Multicopper oxidase ISU62_16815 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU62_16820 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU62_16825 PF17284 Spermidine synthase tetramerisation domain ISU62_16830 PF02675 S-adenosylmethionine decarboxylase ISU62_16835 PF00892 EamA-like transporter family ISU62_16840 PF06062 Uncharacterised protein family (UPF0231) ISU62_16845 PF00330 Aconitase family (aconitate hydratase) ISU62_16845 PF06434 Aconitate hydratase 2 N-terminus ISU62_16845 PF11791 Aconitate B N-terminal domain ISU62_16850 PF01797 Transposase IS200 like ISU62_16855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU62_16855 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_16860 PF00364 Biotin-requiring enzyme ISU62_16860 PF02817 e3 binding domain ISU62_16860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU62_16865 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU62_16865 PF00456 Transketolase, thiamine diphosphate binding domain ISU62_16870 PF07729 FCD domain ISU62_16870 PF00392 Bacterial regulatory proteins, gntR family ISU62_16875 PF00324 Amino acid permease ISU62_16880 PF17113 Regulatory signalling modulator protein AmpE ISU62_16885 PF01510 N-acetylmuramoyl-L-alanine amidase ISU62_16890 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU62_16890 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU62_16895 PF07963 Prokaryotic N-terminal methylation motif ISU62_16900 PF00437 Type II/IV secretion system protein ISU62_16900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU62_16905 PF00482 Type II secretion system (T2SS), protein F ISU62_16910 PF00478 IMP dehydrogenase / GMP reductase domain ISU62_16915 PF01121 Dephospho-CoA kinase ISU62_16920 PF07072 Cell division protein ISU62_16925 PF03884 DNA gyrase inhibitor YacG ISU62_16935 PF00665 Integrase core domain ISU62_16935 PF02796 Helix-turn-helix domain of resolvase ISU62_16940 PF01695 IstB-like ATP binding protein ISU62_16945 PF08676 MutL C terminal dimerisation domain ISU62_16945 PF01119 DNA mismatch repair protein, C-terminal domain ISU62_16955 PF13356 Arm DNA-binding domain ISU62_16955 PF00589 Phage integrase family ISU62_16965 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU62_16970 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU62_16975 PF00883 Cytosol aminopeptidase family, catalytic domain ISU62_16975 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU62_16980 PF04364 DNA polymerase III chi subunit, HolC ISU62_16985 PF00133 tRNA synthetases class I (I, L, M and V) ISU62_16985 PF08264 Anticodon-binding domain of tRNA ISU62_16985 PF10458 Valyl tRNA synthetase tRNA binding arm ISU62_16990 PF00583 Acetyltransferase (GNAT) family ISU62_16995 PF06877 Regulator of ribonuclease activity B ISU62_17000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU62_17000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU62_17005 PF04074 YhcH/YjgK/YiaL ISU62_17015 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_17020 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_17020 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU62_17025 PF00005 ABC transporter ISU62_17025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_17030 PF00005 ABC transporter ISU62_17030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_17035 PF03477 ATP cone domain ISU62_17035 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU62_17045 PF00392 Bacterial regulatory proteins, gntR family ISU62_17045 PF07702 UTRA domain ISU62_17050 PF06754 Phosphonate metabolism protein PhnG ISU62_17055 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU62_17060 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU62_17065 PF06007 Phosphonate metabolism protein PhnJ ISU62_17070 PF00005 ABC transporter ISU62_17075 PF00005 ABC transporter ISU62_17080 PF07969 Amidohydrolase family ISU62_17095 PF13460 NAD(P)H-binding ISU62_17110 PF00005 ABC transporter ISU62_17110 PF17912 MalK OB fold domain ISU62_17110 PF03459 TOBE domain ISU62_17115 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_17120 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_17125 PF13416 Bacterial extracellular solute-binding protein ISU62_17140 PF01541 GIY-YIG catalytic domain ISU62_17145 PF13508 Acetyltransferase (GNAT) domain ISU62_17150 PF02036 SCP-2 sterol transfer family ISU62_17155 PF01136 Peptidase family U32 ISU62_17160 PF01136 Peptidase family U32 ISU62_17165 PF02321 Outer membrane efflux protein ISU62_17165 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU62_17170 PF00873 AcrB/AcrD/AcrF family ISU62_17175 PF00529 HlyD membrane-fusion protein of T1SS ISU62_17175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_17180 PF00296 Luciferase-like monooxygenase ISU62_17190 PF01381 Helix-turn-helix ISU62_17200 PF03880 DbpA RNA binding domain ISU62_17200 PF00270 DEAD/DEAH box helicase ISU62_17200 PF12343 Cold shock protein DEAD box A ISU62_17200 PF00271 Helicase conserved C-terminal domain ISU62_17210 PF07719 Tetratricopeptide repeat ISU62_17210 PF13181 Tetratricopeptide repeat ISU62_17215 PF00013 KH domain ISU62_17215 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU62_17215 PF01138 3' exoribonuclease family, domain 1 ISU62_17215 PF03725 3' exoribonuclease family, domain 2 ISU62_17215 PF00575 S1 RNA binding domain ISU62_17225 PF00312 Ribosomal protein S15 ISU62_17230 PF09157 Pseudouridine synthase II TruB, C-terminal ISU62_17230 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU62_17230 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU62_17235 PF02033 Ribosome-binding factor A ISU62_17240 PF03144 Elongation factor Tu domain 2 ISU62_17240 PF04760 Translation initiation factor IF-2, N-terminal region ISU62_17240 PF08364 Bacterial translation initiation factor IF-2 associated region ISU62_17240 PF11987 Translation-initiation factor 2 ISU62_17240 PF00009 Elongation factor Tu GTP binding domain ISU62_17245 PF08529 NusA N-terminal domain ISU62_17245 PF13184 NusA-like KH domain ISU62_17245 PF00575 S1 RNA binding domain ISU62_17250 PF02576 RimP N-terminal domain ISU62_17250 PF17384 RimP C-terminal SH3 domain ISU62_17265 PF03840 Preprotein translocase SecG subunit ISU62_17270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU62_17270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU62_17270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU62_17270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU62_17275 PF00809 Pterin binding enzyme ISU62_17280 PF17862 AAA+ lid domain ISU62_17280 PF01434 Peptidase family M41 ISU62_17280 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_17280 PF06480 FtsH Extracellular ISU62_17285 PF01728 FtsJ-like methyltransferase ISU62_17290 PF01985 CRS1 / YhbY (CRM) domain ISU62_17295 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU62_17295 PF03449 Transcription elongation factor, N-terminal ISU62_17300 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU62_17305 PF00072 Response regulator receiver domain ISU62_17305 PF00486 Transcriptional regulatory protein, C terminal ISU62_17310 PF00672 HAMP domain ISU62_17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_17310 PF00512 His Kinase A (phospho-acceptor) domain ISU62_17315 PF01018 GTP1/OBG ISU62_17315 PF01926 50S ribosome-binding GTPase ISU62_17320 PF00892 EamA-like transporter family ISU62_17325 PF01016 Ribosomal L27 protein ISU62_17330 PF00829 Ribosomal prokaryotic L21 protein ISU62_17335 PF00348 Polyprenyl synthetase ISU62_17345 PF13693 Winged helix-turn-helix DNA-binding ISU62_17350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU62_17350 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU62_17355 PF01316 Arginine repressor, DNA binding domain ISU62_17355 PF02863 Arginine repressor, C-terminal domain ISU62_17365 PF02875 Mur ligase family, glutamate ligase domain ISU62_17365 PF08245 Mur ligase middle domain ISU62_17365 PF01225 Mur ligase family, catalytic domain ISU62_17370 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU62_17375 PF00719 Inorganic pyrophosphatase ISU62_17380 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU62_17390 PF01103 Surface antigen ISU62_17390 PF07244 Surface antigen variable number repeat ISU62_17390 PF17243 POTRA domain TamA domain 1 ISU62_17395 PF01625 Peptide methionine sulfoxide reductase ISU62_17400 PF00571 CBS domain ISU62_17400 PF03471 Transporter associated domain ISU62_17400 PF01595 Cyclin M transmembrane N-terminal domain ISU62_17405 PF06526 Protein of unknown function (DUF1107) ISU62_17410 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU62_17415 PF00459 Inositol monophosphatase family ISU62_17420 PF02872 5'-nucleotidase, C-terminal domain ISU62_17420 PF00149 Calcineurin-like phosphoesterase ISU62_17425 PF01814 Hemerythrin HHE cation binding domain ISU62_17425 PF04405 Domain of Unknown function (DUF542) ISU62_17430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU62_17430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU62_17435 PF04225 Opacity-associated protein A LysM-like domain ISU62_17435 PF08525 Opacity-associated protein A N-terminal motif ISU62_17445 PF01797 Transposase IS200 like ISU62_17450 PF01281 Ribosomal protein L9, N-terminal domain ISU62_17450 PF03948 Ribosomal protein L9, C-terminal domain ISU62_17455 PF01084 Ribosomal protein S18 ISU62_17460 PF00436 Single-strand binding protein family ISU62_17465 PF01250 Ribosomal protein S6 ISU62_17470 PF00326 Prolyl oligopeptidase family ISU62_17475 PF00665 Integrase core domain ISU62_17475 PF02796 Helix-turn-helix domain of resolvase ISU62_17480 PF01695 IstB-like ATP binding protein ISU62_17490 PF07338 Protein of unknown function (DUF1471) ISU62_17495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU62_17495 PF02770 Acyl-CoA dehydrogenase, middle domain ISU62_17495 PF18158 Adaptive response protein AidB N-terminal domain ISU62_17500 PF00588 SpoU rRNA Methylase family ISU62_17500 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU62_17505 PF17876 Cold shock domain ISU62_17505 PF08461 Ribonuclease R winged-helix domain ISU62_17505 PF00773 RNB domain ISU62_17505 PF00575 S1 RNA binding domain ISU62_17505 PF08206 Ribonuclease B OB domain ISU62_17510 PF02082 Transcriptional regulator ISU62_17515 PF00709 Adenylosuccinate synthetase ISU62_17520 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU62_17525 PF01145 SPFH domain / Band 7 family ISU62_17530 PF01145 SPFH domain / Band 7 family ISU62_17530 PF12221 Bacterial membrane protein N terminal ISU62_17535 PF16360 GTP-binding GTPase Middle Region ISU62_17535 PF13167 GTP-binding GTPase N-terminal ISU62_17535 PF01926 50S ribosome-binding GTPase ISU62_17540 PF17209 Hfq protein ISU62_17555 PF01520 N-acetylmuramoyl-L-alanine amidase ISU62_17560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU62_17565 PF03853 YjeF-related protein N-terminus ISU62_17565 PF01256 Carbohydrate kinase ISU62_17570 PF08331 Domain of unknown function (DUF1730) ISU62_17585 PF00929 Exonuclease ISU62_17590 PF03193 RsgA GTPase ISU62_17595 PF02666 Phosphatidylserine decarboxylase ISU62_17600 PF00924 Mechanosensitive ion channel ISU62_17600 PF12795 Mechanosensitive ion channel porin domain ISU62_17600 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU62_17605 PF00152 tRNA synthetases class II (D, K and N) ISU62_17620 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU62_17620 PF13183 4Fe-4S dicluster domain ISU62_17625 PF02300 Fumarate reductase subunit C ISU62_17630 PF02313 Fumarate reductase subunit D ISU62_17635 PF00893 Small Multidrug Resistance protein ISU62_17640 PF01132 Elongation factor P (EF-P) OB domain ISU62_17640 PF08207 Elongation factor P (EF-P) KOW-like domain ISU62_17640 PF09285 Elongation factor P, C-terminal ISU62_17645 PF04055 Radical SAM superfamily ISU62_17650 PF13698 Domain of unknown function (DUF4156) ISU62_17655 PF00118 TCP-1/cpn60 chaperonin family ISU62_17660 PF00166 Chaperonin 10 Kd subunit ISU62_17665 PF04186 FxsA cytoplasmic membrane protein ISU62_17670 PF10415 Fumarase C C-terminus ISU62_17670 PF00206 Lyase ISU62_17675 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU62_17680 PF03091 CutA1 divalent ion tolerance protein ISU62_17685 PF11412 Disulphide bond corrector protein DsbC ISU62_17685 PF02683 Cytochrome C biogenesis protein transmembrane region ISU62_17690 PF01568 Molydopterin dinucleotide binding domain ISU62_17690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU62_17690 PF00384 Molybdopterin oxidoreductase ISU62_17695 PF13247 4Fe-4S dicluster domain ISU62_17695 PF12800 4Fe-4S binding domain ISU62_17700 PF13247 4Fe-4S dicluster domain ISU62_17700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU62_17700 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_17730 PF06379 L-rhamnose-proton symport protein (RhaT) ISU62_17735 PF12833 Helix-turn-helix domain ISU62_17735 PF02311 AraC-like ligand binding domain ISU62_17740 PF02311 AraC-like ligand binding domain ISU62_17740 PF12833 Helix-turn-helix domain ISU62_17750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_17750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_17755 PF06134 L-rhamnose isomerase (RhaA) ISU62_17760 PF00596 Class II Aldolase and Adducin N-terminal domain ISU62_17765 PF00465 Iron-containing alcohol dehydrogenase ISU62_17770 PF05336 L-rhamnose mutarotase ISU62_17775 PF00436 Single-strand binding protein family ISU62_17780 PF00005 ABC transporter ISU62_17780 PF17755 UvrA DNA-binding domain ISU62_17780 PF17760 UvrA interaction domain ISU62_17785 PF04237 YjbR ISU62_17790 PF00155 Aminotransferase class I and II ISU62_17795 PF00842 Alanine racemase, C-terminal domain ISU62_17795 PF01168 Alanine racemase, N-terminal domain ISU62_17800 PF00772 DnaB-like helicase N terminal domain ISU62_17800 PF03796 DnaB-like helicase C terminal domain ISU62_17805 PF00107 Zinc-binding dehydrogenase ISU62_17805 PF08240 Alcohol dehydrogenase GroES-like domain ISU62_17810 PF09583 Phage shock protein G (Phageshock_PspG) ISU62_17815 PF01207 Dihydrouridine synthase (Dus) ISU62_17820 PF01475 Ferric uptake regulator family ISU62_17825 PF01726 LexA DNA binding domain ISU62_17825 PF00717 Peptidase S24-like ISU62_17830 PF01219 Prokaryotic diacylglycerol kinase ISU62_17835 PF01553 Acyltransferase ISU62_17840 PF01040 UbiA prenyltransferase family ISU62_17845 PF04345 Chorismate lyase ISU62_17850 PF12951 Passenger-associated-transport-repeat ISU62_17855 PF01565 FAD binding domain ISU62_17855 PF08031 Berberine and berberine like ISU62_17870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_17875 PF13954 PapC N-terminal domain ISU62_17875 PF13953 PapC C-terminal domain ISU62_17875 PF00577 Outer membrane usher protein ISU62_17885 PF02342 TerD domain ISU62_17890 PF02342 TerD domain ISU62_17895 PF03741 Integral membrane protein TerC family ISU62_17900 PF05099 Tellurite resistance protein TerB ISU62_17905 PF02342 TerD domain ISU62_17910 PF02342 TerD domain ISU62_17930 PF15608 PELOTA RNA binding domain ISU62_17930 PF11202 Phosphoribosyl transferase (PRTase) ISU62_17950 PF04055 Radical SAM superfamily ISU62_17955 PF06228 Haem utilisation ChuX/HutX ISU62_17960 PF13460 NAD(P)H-binding ISU62_17970 PF00593 TonB dependent receptor ISU62_17970 PF07715 TonB-dependent Receptor Plug Domain ISU62_17975 PF05171 Haemin-degrading HemS.ChuX domain ISU62_17980 PF01497 Periplasmic binding protein ISU62_17985 PF01032 FecCD transport family ISU62_17990 PF00005 ABC transporter ISU62_17995 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU62_18000 PF03222 Tryptophan/tyrosine permease family ISU62_18005 PF03466 LysR substrate binding domain ISU62_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_18010 PF01206 Sulfurtransferase TusA ISU62_18020 PF01312 FlhB HrpN YscU SpaS Family ISU62_18025 PF01311 Bacterial export proteins, family 1 ISU62_18030 PF01313 Bacterial export proteins, family 3 ISU62_18035 PF00813 FliP family ISU62_18040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU62_18055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU62_18055 PF18269 T3SS EscN ATPase C-terminal domain ISU62_18060 PF00771 FHIPEP family ISU62_18075 PF01514 Secretory protein of YscJ/FliF family ISU62_18110 PF03958 Bacterial type II/III secretion system short domain ISU62_18110 PF00263 Bacterial type II and III secretion system protein ISU62_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_18115 PF00512 His Kinase A (phospho-acceptor) domain ISU62_18115 PF01627 Hpt domain ISU62_18115 PF00072 Response regulator receiver domain ISU62_18115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU62_18115 PF00672 HAMP domain ISU62_18120 PF00196 Bacterial regulatory proteins, luxR family ISU62_18120 PF00072 Response regulator receiver domain ISU62_18125 PF00375 Sodium:dicarboxylate symporter family ISU62_18130 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU62_18130 PF13193 AMP-binding enzyme C-terminal domain ISU62_18130 PF00501 AMP-binding enzyme ISU62_18135 PF04341 Protein of unknown function, DUF485 ISU62_18140 PF00474 Sodium:solute symporter family ISU62_18150 PF00665 Integrase core domain ISU62_18150 PF02796 Helix-turn-helix domain of resolvase ISU62_18155 PF01695 IstB-like ATP binding protein ISU62_18190 PF01808 AICARFT/IMPCHase bienzyme ISU62_18190 PF02142 MGS-like domain ISU62_18195 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU62_18195 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU62_18195 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU62_18200 PF07356 Protein of unknown function (DUF1481) ISU62_18205 PF00216 Bacterial DNA-binding protein ISU62_18210 PF04222 Protein of unknown function (DUF416) ISU62_18215 PF04493 Endonuclease V ISU62_18220 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU62_18230 PF00293 NUDIX domain ISU62_18230 PF09297 NADH pyrophosphatase zinc ribbon domain ISU62_18235 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU62_18240 PF13667 ThiC-associated domain ISU62_18240 PF01964 Radical SAM ThiC family ISU62_18245 PF02581 Thiamine monophosphate synthase ISU62_18250 PF00899 ThiF family ISU62_18260 PF05690 Thiazole biosynthesis protein ThiG ISU62_18265 PF04055 Radical SAM superfamily ISU62_18265 PF06968 Biotin and Thiamin Synthesis associated domain ISU62_18270 PF01797 Transposase IS200 like ISU62_18275 PF04997 RNA polymerase Rpb1, domain 1 ISU62_18275 PF04998 RNA polymerase Rpb1, domain 5 ISU62_18275 PF05000 RNA polymerase Rpb1, domain 4 ISU62_18275 PF04983 RNA polymerase Rpb1, domain 3 ISU62_18275 PF00623 RNA polymerase Rpb1, domain 2 ISU62_18280 PF04565 RNA polymerase Rpb2, domain 3 ISU62_18280 PF04561 RNA polymerase Rpb2, domain 2 ISU62_18280 PF04563 RNA polymerase beta subunit ISU62_18280 PF04560 RNA polymerase Rpb2, domain 7 ISU62_18280 PF10385 RNA polymerase beta subunit external 1 domain ISU62_18280 PF00562 RNA polymerase Rpb2, domain 6 ISU62_18285 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU62_18285 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU62_18290 PF00466 Ribosomal protein L10 ISU62_18295 PF00687 Ribosomal protein L1p/L10e family ISU62_18300 PF00298 Ribosomal protein L11, RNA binding domain ISU62_18300 PF03946 Ribosomal protein L11, N-terminal domain ISU62_18305 PF00467 KOW motif ISU62_18305 PF02357 Transcription termination factor nusG ISU62_18310 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU62_18315 PF03143 Elongation factor Tu C-terminal domain ISU62_18315 PF03144 Elongation factor Tu domain 2 ISU62_18315 PF00009 Elongation factor Tu GTP binding domain ISU62_18340 PF01695 IstB-like ATP binding protein ISU62_18345 PF00665 Integrase core domain ISU62_18345 PF02796 Helix-turn-helix domain of resolvase ISU62_18350 PF13673 Acetyltransferase (GNAT) domain ISU62_18355 PF00485 Phosphoribulokinase / Uridine kinase family ISU62_18360 PF08279 HTH domain ISU62_18360 PF03099 Biotin/lipoate A/B protein ligase family ISU62_18360 PF02237 Biotin protein ligase C terminal domain ISU62_18365 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU62_18365 PF01565 FAD binding domain ISU62_18395 PF12724 Flavodoxin domain ISU62_18400 PF02386 Cation transport protein ISU62_18415 PF09186 Domain of unknown function (DUF1949) ISU62_18415 PF01205 Uncharacterized protein family UPF0029 ISU62_18420 PF00557 Metallopeptidase family M24 ISU62_18425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU62_18425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU62_18425 PF00378 Enoyl-CoA hydratase/isomerase ISU62_18430 PF00108 Thiolase, N-terminal domain ISU62_18430 PF02803 Thiolase, C-terminal domain ISU62_18435 PF00970 Oxidoreductase FAD-binding domain ISU62_18435 PF00175 Oxidoreductase NAD-binding domain ISU62_18440 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU62_18445 PF02357 Transcription termination factor nusG ISU62_18450 PF00490 Delta-aminolevulinic acid dehydratase ISU62_18455 PF01026 TatD related DNase ISU62_18465 PF00665 Integrase core domain ISU62_18465 PF02796 Helix-turn-helix domain of resolvase ISU62_18475 PF00902 Sec-independent protein translocase protein (TatC) ISU62_18485 PF02416 mttA/Hcf106 family ISU62_18490 PF03109 ABC1 family ISU62_18495 PF02036 SCP-2 sterol transfer family ISU62_18500 PF01209 ubiE/COQ5 methyltransferase family ISU62_18505 PF02646 RmuC family ISU62_18510 PF09335 SNARE associated Golgi protein ISU62_18515 PF02554 Carbon starvation protein CstA ISU62_18515 PF13722 5TM C-terminal transporter carbon starvation CstA ISU62_18525 PF01048 Phosphorylase superfamily ISU62_18530 PF01738 Dienelactone hydrolase family ISU62_18535 PF08267 Cobalamin-independent synthase, N-terminal domain ISU62_18535 PF01717 Cobalamin-independent synthase, Catalytic domain ISU62_18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_18540 PF03466 LysR substrate binding domain ISU62_18545 PF00892 EamA-like transporter family ISU62_18550 PF03547 Membrane transport protein ISU62_18555 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU62_18560 PF17912 MalK OB fold domain ISU62_18560 PF00005 ABC transporter ISU62_18565 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_18570 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_18575 PF13416 Bacterial extracellular solute-binding protein ISU62_18615 PF00005 ABC transporter ISU62_18620 PF00005 ABC transporter ISU62_18620 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU62_18625 PF02653 Branched-chain amino acid transport system / permease component ISU62_18625 PF11862 Domain of unknown function (DUF3382) ISU62_18630 PF02653 Branched-chain amino acid transport system / permease component ISU62_18635 PF13458 Periplasmic binding protein ISU62_18640 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU62_18645 PF01797 Transposase IS200 like ISU62_18650 PF00140 Sigma-70 factor, region 1.2 ISU62_18650 PF04542 Sigma-70 region 2 ISU62_18650 PF04545 Sigma-70, region 4 ISU62_18655 PF02687 FtsX-like permease family ISU62_18655 PF18075 FtsX extracellular domain ISU62_18660 PF00005 ABC transporter ISU62_18665 PF00448 SRP54-type protein, GTPase domain ISU62_18665 PF00448 SRP54-type protein, GTPase domain ISU62_18665 PF02881 SRP54-type protein, helical bundle domain ISU62_18665 PF02881 SRP54-type protein, helical bundle domain ISU62_18675 PF06611 Protein of unknown function (DUF1145) ISU62_18690 PF07947 YhhN family ISU62_18695 PF00403 Heavy-metal-associated domain ISU62_18700 PF01206 Sulfurtransferase TusA ISU62_18705 PF02592 Putative vitamin uptake transporter ISU62_18710 PF08786 DcrB ISU62_18715 PF02754 Cysteine-rich domain ISU62_18715 PF13183 4Fe-4S dicluster domain ISU62_18720 PF00890 FAD binding domain ISU62_18725 PF01266 FAD dependent oxidoreductase ISU62_18725 PF04324 BFD-like [2Fe-2S] binding domain ISU62_18730 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU62_18745 PF12146 Serine aminopeptidase, S33 ISU62_18750 PF01810 LysE type translocator ISU62_18755 PF01810 LysE type translocator ISU62_18760 PF00270 DEAD/DEAH box helicase ISU62_18760 PF00570 HRDC domain ISU62_18760 PF16124 RecQ zinc-binding ISU62_18760 PF09382 RQC domain ISU62_18760 PF00271 Helicase conserved C-terminal domain ISU62_18765 PF02253 Phospholipase A1 ISU62_18770 PF03061 Thioesterase superfamily ISU62_18775 PF00892 EamA-like transporter family ISU62_18780 PF01544 CorA-like Mg2+ transporter protein ISU62_18785 PF09370 Phosphoenolpyruvate hydrolase-like ISU62_18800 PF13361 UvrD-like helicase C-terminal domain ISU62_18800 PF00580 UvrD/REP helicase N-terminal domain ISU62_18805 PF13419 Haloacid dehalogenase-like hydrolase ISU62_18810 PF02899 Phage integrase, N-terminal SAM-like domain ISU62_18810 PF00589 Phage integrase family ISU62_18815 PF04340 Protein of unknown function, DUF484 ISU62_18820 PF01678 Diaminopimelate epimerase ISU62_18825 PF13627 Prokaryotic lipoprotein-attachment site ISU62_18830 PF01491 Frataxin-like domain ISU62_18835 PF12633 Adenylate cyclase NT domain ISU62_18835 PF01295 Adenylate cyclase, class-I ISU62_18845 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU62_18845 PF03900 Porphobilinogen deaminase, C-terminal domain ISU62_18850 PF02602 Uroporphyrinogen-III synthase HemD ISU62_18855 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU62_18860 PF07219 HemY protein N-terminus ISU62_18860 PF07719 Tetratricopeptide repeat ISU62_18890 PF00324 Amino acid permease ISU62_18895 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU62_18900 PF06899 WzyE protein, O-antigen assembly polymerase ISU62_18905 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU62_18910 PF01943 Polysaccharide biosynthesis protein ISU62_18915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU62_18925 PF00483 Nucleotidyl transferase ISU62_18930 PF16363 GDP-mannose 4,6 dehydratase ISU62_18935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU62_18935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU62_18935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU62_18940 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU62_18945 PF02706 Chain length determinant protein ISU62_18950 PF00953 Glycosyl transferase family 4 ISU62_18955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU62_18955 PF07498 Rho termination factor, N-terminal domain ISU62_18955 PF07497 Rho termination factor, RNA-binding domain ISU62_18960 PF00085 Thioredoxin ISU62_18965 PF00270 DEAD/DEAH box helicase ISU62_18965 PF00271 Helicase conserved C-terminal domain ISU62_18975 PF13361 UvrD-like helicase C-terminal domain ISU62_18975 PF00580 UvrD/REP helicase N-terminal domain ISU62_18995 PF00872 Transposase, Mutator family ISU62_19005 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_19005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_19010 PF13953 PapC C-terminal domain ISU62_19010 PF13954 PapC N-terminal domain ISU62_19010 PF00577 Outer membrane usher protein ISU62_19020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_19020 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_19025 PF01320 Colicin immunity protein / pyocin immunity protein ISU62_19050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU62_19050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU62_19055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_19055 PF03466 LysR substrate binding domain ISU62_19090 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU62_19090 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_19095 PF00920 Dehydratase family ISU62_19100 PF01063 Amino-transferase class IV ISU62_19110 PF00205 Thiamine pyrophosphate enzyme, central domain ISU62_19110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU62_19110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU62_19115 PF08046 IlvGEDA operon leader peptide ISU62_19120 PF01078 Magnesium chelatase, subunit ChlI ISU62_19120 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU62_19125 PF04219 Protein of unknown function, DUF ISU62_19130 PF03466 LysR substrate binding domain ISU62_19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_19135 PF02653 Branched-chain amino acid transport system / permease component ISU62_19140 PF02653 Branched-chain amino acid transport system / permease component ISU62_19145 PF00005 ABC transporter ISU62_19150 PF13407 Periplasmic binding protein domain ISU62_19185 PF01177 Asp/Glu/Hydantoin racemase ISU62_19190 PF07715 TonB-dependent Receptor Plug Domain ISU62_19190 PF00593 TonB dependent receptor ISU62_19195 PF05958 tRNA (Uracil-5-)-methyltransferase ISU62_19200 PF07226 Protein of unknown function (DUF1422) ISU62_19205 PF00440 Bacterial regulatory proteins, tetR family ISU62_19210 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_19210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU62_19215 PF03466 LysR substrate binding domain ISU62_19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_19220 PF00462 Glutaredoxin ISU62_19220 PF08534 Redoxin ISU62_19225 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_19225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU62_19230 PF03544 Gram-negative bacterial TonB protein C-terminal ISU62_19235 PF00529 HlyD membrane-fusion protein of T1SS ISU62_19240 PF00664 ABC transporter transmembrane region ISU62_19240 PF00005 ABC transporter ISU62_19250 PF00593 TonB dependent receptor ISU62_19250 PF07715 TonB-dependent Receptor Plug Domain ISU62_19255 PF14698 Argininosuccinate lyase C-terminal ISU62_19255 PF00206 Lyase ISU62_19260 PF00696 Amino acid kinase family ISU62_19265 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU62_19265 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU62_19270 PF01546 Peptidase family M20/M25/M40 ISU62_19270 PF07687 Peptidase dimerisation domain ISU62_19275 PF00311 Phosphoenolpyruvate carboxylase ISU62_19300 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU62_19300 PF01266 FAD dependent oxidoreductase ISU62_19305 PF00343 Carbohydrate phosphorylase ISU62_19310 PF08323 Starch synthase catalytic domain ISU62_19310 PF00534 Glycosyl transferases group 1 ISU62_19320 PF18390 Glycogen debranching enzyme C-terminal domain ISU62_19320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU62_19320 PF00128 Alpha amylase, catalytic domain ISU62_19325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU62_19325 PF02806 Alpha amylase, C-terminal all-beta domain ISU62_19325 PF00128 Alpha amylase, catalytic domain ISU62_19330 PF07694 5TMR of 5TMR-LYT ISU62_19330 PF06580 Histidine kinase ISU62_19365 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU62_19365 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU62_19370 PF01914 MarC family integral membrane protein ISU62_19385 PF01202 Shikimate kinase ISU62_19390 PF02447 GntP family permease ISU62_19395 PF00356 Bacterial regulatory proteins, lacI family ISU62_19395 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU62_19400 PF17954 Quercetinase C-terminal cupin domain ISU62_19400 PF02678 Pirin ISU62_19410 PF00072 Response regulator receiver domain ISU62_19410 PF00486 Transcriptional regulatory protein, C terminal ISU62_19420 PF01116 Fructose-bisphosphate aldolase class-II ISU62_19430 PF13407 Periplasmic binding protein domain ISU62_19435 PF02653 Branched-chain amino acid transport system / permease component ISU62_19440 PF00005 ABC transporter ISU62_19445 PF13188 PAS domain ISU62_19445 PF08448 PAS fold ISU62_19445 PF00512 His Kinase A (phospho-acceptor) domain ISU62_19445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_19445 PF00072 Response regulator receiver domain ISU62_19455 PF01384 Phosphate transporter family ISU62_19465 PF10625 Universal stress protein B (UspB) ISU62_19470 PF00582 Universal stress protein family ISU62_19475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU62_19475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU62_19480 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU62_19480 PF00413 Matrixin ISU62_19480 PF08548 Peptidase M10 serralysin C terminal ISU62_19485 PF04445 Putative SAM-dependent methyltransferase ISU62_19490 PF01432 Peptidase family M3 ISU62_19495 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU62_19500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU62_19500 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU62_19505 PF05651 Putative sugar diacid recognition ISU62_19505 PF17853 GGDEF-like domain ISU62_19505 PF13556 PucR C-terminal helix-turn-helix domain ISU62_19515 PF02447 GntP family permease ISU62_19520 PF02595 Glycerate kinase family ISU62_19545 PF03631 Virulence factor BrkB ISU62_19550 PF02611 CDP-diacylglycerol pyrophosphatase ISU62_19555 PF05170 AsmA family ISU62_19560 PF00563 EAL domain ISU62_19565 PF01361 Tautomerase enzyme ISU62_19570 PF00294 pfkB family carbohydrate kinase ISU62_19575 PF00675 Insulinase (Peptidase family M16) ISU62_19575 PF05193 Peptidase M16 inactive domain ISU62_19580 PF00375 Sodium:dicarboxylate symporter family ISU62_19590 PF06917 Periplasmic pectate lyase ISU62_19595 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU62_19600 PF00563 EAL domain ISU62_19600 PF17154 Gammaproteobacterial periplasmic sensor domain ISU62_19600 PF00990 Diguanylate cyclase, GGDEF domain ISU62_19600 PF00672 HAMP domain ISU62_19605 PF01270 Glycosyl hydrolases family 8 ISU62_19610 PF00005 ABC transporter ISU62_19610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_19615 PF00005 ABC transporter ISU62_19615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU62_19620 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_19620 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU62_19630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU62_19635 PF17287 POTRA domain ISU62_19635 PF08479 POTRA domain, ShlB-type ISU62_19635 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU62_19640 PF04829 Pre-toxin domain with VENN motif ISU62_19640 PF05860 haemagglutination activity domain ISU62_19640 PF13332 Hemagglutinin repeat ISU62_19640 PF05594 Haemagluttinin repeat ISU62_19650 PF07690 Major Facilitator Superfamily ISU62_19655 PF07730 Histidine kinase ISU62_19655 PF05231 MASE1 ISU62_19655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_19665 PF00665 Integrase core domain ISU62_19665 PF02796 Helix-turn-helix domain of resolvase ISU62_19675 PF00072 Response regulator receiver domain ISU62_19675 PF00196 Bacterial regulatory proteins, luxR family ISU62_19680 PF00884 Sulfatase ISU62_19680 PF08019 Phosphoethanolamine transferase EptA/EptB ISU62_19685 PF12146 Serine aminopeptidase, S33 ISU62_19690 PF00324 Amino acid permease ISU62_19695 PF00221 Aromatic amino acid lyase ISU62_19700 PF17391 Urocanase N-terminal domain ISU62_19700 PF17392 Urocanase C-terminal domain ISU62_19700 PF01175 Urocanase Rossmann-like domain ISU62_19705 PF00291 Pyridoxal-phosphate dependent enzyme ISU62_19710 PF00156 Phosphoribosyl transferase domain ISU62_19725 PF01497 Periplasmic binding protein ISU62_19730 PF01032 FecCD transport family ISU62_19735 PF01032 FecCD transport family ISU62_19740 PF00005 ABC transporter ISU62_19775 PF04606 Ogr/Delta-like zinc finger ISU62_19785 PF14659 Phage integrase, N-terminal SAM-like domain ISU62_19785 PF00589 Phage integrase family ISU62_19785 PF13356 Arm DNA-binding domain ISU62_19795 PF12833 Helix-turn-helix domain ISU62_19800 PF02653 Branched-chain amino acid transport system / permease component ISU62_19805 PF00005 ABC transporter ISU62_19810 PF13407 Periplasmic binding protein domain ISU62_19820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_19820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_19830 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU62_19830 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU62_19840 PF00419 Fimbrial protein ISU62_19845 PF01757 Acyltransferase family ISU62_19860 PF02219 Methylenetetrahydrofolate reductase ISU62_19865 PF03447 Homoserine dehydrogenase, NAD binding domain ISU62_19865 PF00742 Homoserine dehydrogenase ISU62_19865 PF00696 Amino acid kinase family ISU62_19875 PF01340 Met Apo-repressor, MetJ ISU62_19880 PF05360 yiaA/B two helix domain ISU62_19885 PF01197 Ribosomal protein L31 ISU62_19890 PF17764 3′ DNA-binding domain (3′BD) ISU62_19890 PF18074 Primosomal protein N C-terminal domain ISU62_19890 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU62_19890 PF00271 Helicase conserved C-terminal domain ISU62_19890 PF00270 DEAD/DEAH box helicase ISU62_19895 PF00356 Bacterial regulatory proteins, lacI family ISU62_19900 PF05036 Sporulation related domain ISU62_19905 PF00227 Proteasome subunit ISU62_19910 PF00004 ATPase family associated with various cellular activities (AAA) ISU62_19910 PF07724 AAA domain (Cdc48 subfamily) ISU62_19910 PF10431 C-terminal, D2-small domain, of ClpB protein ISU62_19915 PF01040 UbiA prenyltransferase family ISU62_19920 PF03737 Aldolase/RraA ISU62_19935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU62_19935 PF00529 HlyD membrane-fusion protein of T1SS ISU62_19940 PF03412 Peptidase C39 family ISU62_19940 PF00005 ABC transporter ISU62_19940 PF00664 ABC transporter transmembrane region ISU62_19950 PF06005 Cell division protein ZapB ISU62_19955 PF00230 Major intrinsic protein ISU62_19960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU62_19960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU62_19965 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU62_19970 PF00970 Oxidoreductase FAD-binding domain ISU62_19970 PF00175 Oxidoreductase NAD-binding domain ISU62_19975 PF05656 Protein of unknown function (DUF805) ISU62_19980 PF07305 Protein of unknown function (DUF1454) ISU62_19985 PF00121 Triosephosphate isomerase ISU62_19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU62_19990 PF03466 LysR substrate binding domain ISU62_19995 PF02585 GlcNAc-PI de-N-acetylase ISU62_20000 PF03737 Aldolase/RraA ISU62_20005 PF00939 Sodium:sulfate symporter transmembrane region ISU62_20020 PF00365 Phosphofructokinase ISU62_20025 PF01545 Cation efflux family ISU62_20025 PF16916 Dimerisation domain of Zinc Transporter ISU62_20030 PF04754 Putative transposase, YhgA-like ISU62_20040 PF07813 LTXXQ motif family protein ISU62_20045 PF00072 Response regulator receiver domain ISU62_20045 PF00486 Transcriptional regulatory protein, C terminal ISU62_20050 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU62_20050 PF00672 HAMP domain ISU62_20050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_20050 PF00512 His Kinase A (phospho-acceptor) domain ISU62_20055 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU62_20055 PF12833 Helix-turn-helix domain ISU62_20055 PF02805 Metal binding domain of Ada ISU62_20055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU62_20060 PF00588 SpoU rRNA Methylase family ISU62_20065 PF00132 Bacterial transferase hexapeptide (six repeats) ISU62_20065 PF06426 Serine acetyltransferase, N-terminal ISU62_20070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU62_20070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU62_20075 PF02556 Preprotein translocase subunit SecB ISU62_20080 PF00462 Glutaredoxin ISU62_20085 PF00581 Rhodanese-like domain ISU62_20090 PF01676 Metalloenzyme superfamily ISU62_20090 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU62_20095 PF01551 Peptidase family M23 ISU62_20105 PF00107 Zinc-binding dehydrogenase ISU62_20105 PF08240 Alcohol dehydrogenase GroES-like domain ISU62_20110 PF00155 Aminotransferase class I and II ISU62_20115 PF01370 NAD dependent epimerase/dehydratase family ISU62_20120 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU62_20125 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU62_20130 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU62_20135 PF00535 Glycosyl transferase family 2 ISU62_20140 PF01467 Cytidylyltransferase-like ISU62_20145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU62_20145 PF06827 Zinc finger found in FPG and IleRS ISU62_20145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU62_20150 PF00471 Ribosomal protein L33 ISU62_20155 PF00830 Ribosomal L28 family ISU62_20160 PF04002 RadC-like JAB domain ISU62_20165 PF02441 Flavoprotein ISU62_20165 PF04127 DNA / pantothenate metabolism flavoprotein ISU62_20170 PF00692 dUTPase ISU62_20175 PF00440 Bacterial regulatory proteins, tetR family ISU62_20180 PF00156 Phosphoribosyl transferase domain ISU62_20185 PF03725 3' exoribonuclease family, domain 2 ISU62_20185 PF01138 3' exoribonuclease family, domain 1 ISU62_20190 PF03755 YicC-like family, N-terminal region ISU62_20190 PF08340 Domain of unknown function (DUF1732) ISU62_20195 PF03458 UPF0126 domain ISU62_20200 PF01653 NAD-dependent DNA ligase adenylation domain ISU62_20200 PF03120 NAD-dependent DNA ligase OB-fold domain ISU62_20205 PF00625 Guanylate kinase ISU62_20210 PF01192 RNA polymerase Rpb6 ISU62_20215 PF13291 ACT domain ISU62_20215 PF02824 TGS domain ISU62_20215 PF04607 Region found in RelA / SpoT proteins ISU62_20220 PF00588 SpoU rRNA Methylase family ISU62_20220 PF12105 SpoU, rRNA methylase, C-terminal ISU62_20225 PF00270 DEAD/DEAH box helicase ISU62_20225 PF17191 RecG wedge domain ISU62_20225 PF00271 Helicase conserved C-terminal domain ISU62_20235 PF03616 Sodium/glutamate symporter ISU62_20240 PF00860 Permease family ISU62_20245 PF05170 AsmA family ISU62_20250 PF00583 Acetyltransferase (GNAT) family ISU62_20250 PF09500 Putative thioesterase (yiiD_Cterm) ISU62_20255 PF00665 Integrase core domain ISU62_20255 PF02796 Helix-turn-helix domain of resolvase ISU62_20260 PF01695 IstB-like ATP binding protein ISU62_20265 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU62_20270 PF03631 Virulence factor BrkB ISU62_20275 PF13419 Haloacid dehalogenase-like hydrolase ISU62_20280 PF00009 Elongation factor Tu GTP binding domain ISU62_20280 PF03144 Elongation factor Tu domain 2 ISU62_20280 PF00679 Elongation factor G C-terminus ISU62_20285 PF03951 Glutamine synthetase, beta-Grasp domain ISU62_20285 PF00120 Glutamine synthetase, catalytic domain ISU62_20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU62_20290 PF00989 PAS fold ISU62_20290 PF00512 His Kinase A (phospho-acceptor) domain ISU62_20295 PF02954 Bacterial regulatory protein, Fis family ISU62_20295 PF00158 Sigma-54 interaction domain ISU62_20295 PF00072 Response regulator receiver domain ISU62_20300 PF06969 HemN C-terminal domain ISU62_20300 PF04055 Radical SAM superfamily ISU62_20305 PF04220 Der GTPase activator (YihI) ISU62_20310 PF01926 50S ribosome-binding GTPase ISU62_20315 PF01797 Transposase IS200 like ISU62_20320 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU62_20320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU62_20320 PF00476 DNA polymerase family A ISU62_20320 PF01612 3'-5' exonuclease ISU62_20325 PF01323 DSBA-like thioredoxin domain ISU62_20330 PF01636 Phosphotransferase enzyme family ISU62_20335 PF06288 Protein of unknown function (DUF1040) ISU62_20340 PF12804 MobA-like NTP transferase domain ISU62_20345 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU62_20350 PF00872 Transposase, Mutator family ISU62_20375 PF07729 FCD domain ISU62_20375 PF00392 Bacterial regulatory proteins, gntR family ISU62_20380 PF07690 Major Facilitator Superfamily ISU62_20395 PF00294 pfkB family carbohydrate kinase ISU62_20400 PF05025 RbsD / FucU transport protein family ISU62_20405 PF02705 K+ potassium transporter ISU62_20410 PF12592 Protein of unknown function (DUF3763) ISU62_20410 PF07728 AAA domain (dynein-related subfamily) ISU62_20410 PF17868 AAA lid domain ISU62_20420 PF03590 Aspartate-ammonia ligase ISU62_20425 PF01037 Lrp/AsnC ligand binding domain ISU62_20430 PF00258 Flavodoxin ISU62_20435 PF01134 Glucose inhibited division protein A ISU62_20435 PF13932 GidA associated domain ISU62_20440 PF02527 rRNA small subunit methyltransferase G ISU62_20445 PF03899 ATP synthase I chain ISU62_20450 PF00119 ATP synthase A chain ISU62_20455 PF00137 ATP synthase subunit C ISU62_20460 PF00430 ATP synthase B/B' CF(0) ISU62_20465 PF00213 ATP synthase delta (OSCP) subunit ISU62_20470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU62_20470 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU62_20470 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU62_20475 PF00231 ATP synthase ISU62_20480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU62_20480 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU62_20485 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU62_20485 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU62_20490 PF12804 MobA-like NTP transferase domain ISU62_20490 PF00132 Bacterial transferase hexapeptide (six repeats) ISU62_20495 PF01380 SIS domain ISU62_20500 PF12849 PBP superfamily domain ISU62_20505 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_20510 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_20515 PF00005 ABC transporter ISU62_20520 PF01895 PhoU domain ISU62_20530 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU62_20535 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_20540 PF00528 Binding-protein-dependent transport system inner membrane component ISU62_20545 PF13419 Haloacid dehalogenase-like hydrolase ISU62_20555 PF00860 Permease family ISU62_20575 PF07055 Enoyl reductase FAD binding domain ISU62_20575 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU62_20575 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU62_20580 PF01926 50S ribosome-binding GTPase ISU62_20580 PF12631 MnmE helical domain ISU62_20580 PF10396 GTP-binding protein TrmE N-terminus ISU62_20585 PF02096 60Kd inner membrane protein ISU62_20585 PF14849 YidC periplasmic domain ISU62_20590 PF01809 Putative membrane protein insertion efficiency factor ISU62_20595 PF00825 Ribonuclease P ISU62_20600 PF00468 Ribosomal protein L34