locus-tag class description ISU65_00005 PF11638 DnaA N-terminal domain ISU65_00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU65_00005 PF00308 Bacterial dnaA protein ISU65_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU65_00010 PF02767 DNA polymerase III beta subunit, central domain ISU65_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU65_00020 PF02463 RecF/RecN/SMC N terminal domain ISU65_00025 PF01751 Toprim domain ISU65_00025 PF18053 DNA gyrase B subunit insert domain ISU65_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU65_00025 PF00204 DNA gyrase B ISU65_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU65_00045 PF13291 ACT domain ISU65_00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_00055 PF07119 Protein of unknown function (DUF1375) ISU65_00060 PF00011 Hsp20/alpha crystallin family ISU65_00065 PF00011 Hsp20/alpha crystallin family ISU65_00070 PF06826 Predicted Permease Membrane Region ISU65_00070 PF02080 TrkA-C domain ISU65_00075 PF00155 Aminotransferase class I and II ISU65_00085 PF00128 Alpha amylase, catalytic domain ISU65_00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU65_00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU65_00100 PF00691 OmpA family ISU65_00100 PF13488 Glycine zipper ISU65_00110 PF03352 Methyladenine glycosylase ISU65_00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU65_00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU65_00120 PF05746 DALR anticodon binding domain ISU65_00130 PF11254 Protein of unknown function (DUF3053) ISU65_00135 PF02378 Phosphotransferase system, EIIC ISU65_00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU65_00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU65_00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU65_00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU65_00145 PF05068 Mannitol repressor ISU65_00150 PF10928 Protein of unknown function (DUF2810) ISU65_00165 PF02203 Tar ligand binding domain homologue ISU65_00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU65_00165 PF00672 HAMP domain ISU65_00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU65_00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU65_00175 PF02634 FdhD/NarQ family ISU65_00185 PF09163 Formate dehydrogenase N, transmembrane ISU65_00185 PF13247 4Fe-4S dicluster domain ISU65_00190 PF01292 Prokaryotic cytochrome b561 ISU65_00195 PF04216 Protein involved in formate dehydrogenase formation ISU65_00200 PF03841 L-seryl-tRNA selenium transferase ISU65_00200 PF12390 Selenocysteine synthase N terminal ISU65_00205 PF00009 Elongation factor Tu GTP binding domain ISU65_00205 PF03144 Elongation factor Tu domain 2 ISU65_00205 PF09106 Elongation factor SelB, winged helix ISU65_00205 PF09107 Elongation factor SelB, winged helix ISU65_00235 PF07690 Major Facilitator Superfamily ISU65_00250 PF01757 Acyltransferase family ISU65_00255 PF00419 Fimbrial protein ISU65_00265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_00265 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_00275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_00275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_00285 PF13407 Periplasmic binding protein domain ISU65_00290 PF00005 ABC transporter ISU65_00295 PF02653 Branched-chain amino acid transport system / permease component ISU65_00300 PF12833 Helix-turn-helix domain ISU65_00310 PF13356 Arm DNA-binding domain ISU65_00310 PF00589 Phage integrase family ISU65_00310 PF14659 Phage integrase, N-terminal SAM-like domain ISU65_00320 PF04606 Ogr/Delta-like zinc finger ISU65_00355 PF00005 ABC transporter ISU65_00360 PF01032 FecCD transport family ISU65_00365 PF01032 FecCD transport family ISU65_00370 PF01497 Periplasmic binding protein ISU65_00385 PF00156 Phosphoribosyl transferase domain ISU65_00390 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_00395 PF17391 Urocanase N-terminal domain ISU65_00395 PF17392 Urocanase C-terminal domain ISU65_00395 PF01175 Urocanase Rossmann-like domain ISU65_00400 PF00221 Aromatic amino acid lyase ISU65_00405 PF00324 Amino acid permease ISU65_00410 PF12146 Serine aminopeptidase, S33 ISU65_00415 PF08019 Phosphoethanolamine transferase EptA/EptB ISU65_00415 PF00884 Sulfatase ISU65_00420 PF00196 Bacterial regulatory proteins, luxR family ISU65_00420 PF00072 Response regulator receiver domain ISU65_00430 PF02796 Helix-turn-helix domain of resolvase ISU65_00430 PF00665 Integrase core domain ISU65_00435 PF01695 IstB-like ATP binding protein ISU65_00440 PF00132 Bacterial transferase hexapeptide (six repeats) ISU65_00445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU65_00445 PF01488 Shikimate / quinate 5-dehydrogenase ISU65_00445 PF08501 Shikimate dehydrogenase substrate binding domain ISU65_00450 PF01300 Telomere recombination ISU65_00455 PF01396 Topoisomerase DNA binding C4 zinc finger ISU65_00460 PF04361 Protein of unknown function (DUF494) ISU65_00465 PF02481 DNA recombination-mediator protein A ISU65_00465 PF17782 DprA winged helix domain ISU65_00470 PF01327 Polypeptide deformylase ISU65_00475 PF00551 Formyl transferase ISU65_00475 PF02911 Formyl transferase, C-terminal domain ISU65_00480 PF01189 16S rRNA methyltransferase RsmB/F ISU65_00480 PF01029 NusB family ISU65_00485 PF02080 TrkA-C domain ISU65_00485 PF02254 TrkA-N domain ISU65_00490 PF01741 Large-conductance mechanosensitive channel, MscL ISU65_00495 PF03889 Alternative ribosome-rescue factor A ISU65_00500 PF13411 MerR HTH family regulatory protein ISU65_00505 PF01196 Ribosomal protein L17 ISU65_00510 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU65_00510 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU65_00510 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU65_00515 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU65_00515 PF01479 S4 domain ISU65_00520 PF00411 Ribosomal protein S11 ISU65_00525 PF00416 Ribosomal protein S13/S18 ISU65_00530 PF00444 Ribosomal protein L36 ISU65_00535 PF00344 SecY translocase ISU65_00540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU65_00545 PF00327 Ribosomal protein L30p/L7e ISU65_00550 PF00333 Ribosomal protein S5, N-terminal domain ISU65_00550 PF03719 Ribosomal protein S5, C-terminal domain ISU65_00555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU65_00560 PF00347 Ribosomal protein L6 ISU65_00565 PF00410 Ribosomal protein S8 ISU65_00570 PF00253 Ribosomal protein S14p/S29e ISU65_00575 PF00281 Ribosomal protein L5 ISU65_00575 PF00673 ribosomal L5P family C-terminus ISU65_00580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU65_00580 PF00467 KOW motif ISU65_00585 PF00238 Ribosomal protein L14p/L23e ISU65_00590 PF00366 Ribosomal protein S17 ISU65_00595 PF00831 Ribosomal L29 protein ISU65_00600 PF00252 Ribosomal protein L16p/L10e ISU65_00605 PF07650 KH domain ISU65_00605 PF00189 Ribosomal protein S3, C-terminal domain ISU65_00610 PF00237 Ribosomal protein L22p/L17e ISU65_00615 PF00203 Ribosomal protein S19 ISU65_00620 PF03947 Ribosomal Proteins L2, C-terminal domain ISU65_00620 PF00181 Ribosomal Proteins L2, RNA binding domain ISU65_00625 PF00276 Ribosomal protein L23 ISU65_00630 PF00573 Ribosomal protein L4/L1 family ISU65_00635 PF00297 Ribosomal protein L3 ISU65_00640 PF00338 Ribosomal protein S10p/S20e ISU65_00645 PF00210 Ferritin-like domain ISU65_00650 PF04324 BFD-like [2Fe-2S] binding domain ISU65_00655 PF01797 Transposase IS200 like ISU65_00660 PF03143 Elongation factor Tu C-terminal domain ISU65_00660 PF00009 Elongation factor Tu GTP binding domain ISU65_00660 PF03144 Elongation factor Tu domain 2 ISU65_00665 PF14492 Elongation Factor G, domain II ISU65_00665 PF03764 Elongation factor G, domain IV ISU65_00665 PF00679 Elongation factor G C-terminus ISU65_00665 PF03144 Elongation factor Tu domain 2 ISU65_00665 PF00009 Elongation factor Tu GTP binding domain ISU65_00670 PF00177 Ribosomal protein S7p/S5e ISU65_00675 PF00164 Ribosomal protein S12/S23 ISU65_00680 PF04077 DsrH like protein ISU65_00685 PF02635 DsrE/DsrF-like family ISU65_00690 PF02635 DsrE/DsrF-like family ISU65_00695 PF13309 HTH domain ISU65_00695 PF08348 YheO-like PAS domain ISU65_00700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU65_00700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU65_00705 PF04102 SlyX ISU65_00710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU65_00715 PF09526 Probable metal-binding protein (DUF2387) ISU65_00720 PF02254 TrkA-N domain ISU65_00720 PF00999 Sodium/hydrogen exchanger family ISU65_00725 PF02525 Flavodoxin-like fold ISU65_00735 PF00535 Glycosyl transferase family 2 ISU65_00745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU65_00750 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_00755 PF00005 ABC transporter ISU65_00760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU65_00765 PF01810 LysE type translocator ISU65_00770 PF00561 alpha/beta hydrolase fold ISU65_00775 PF06794 Uncharacterised protein family (UPF0270) ISU65_00780 PF00485 Phosphoribulokinase / Uridine kinase family ISU65_00790 PF02566 OsmC-like protein ISU65_00795 PF13545 Crp-like helix-turn-helix domain ISU65_00795 PF00027 Cyclic nucleotide-binding domain ISU65_00800 PF12805 FUSC-like inner membrane protein yccS ISU65_00805 PF00202 Aminotransferase class-III ISU65_00810 PF00117 Glutamine amidotransferase class-I ISU65_00815 PF05872 Bacterial protein of unknown function (DUF853) ISU65_00820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU65_00825 PF02056 Family 4 glycosyl hydrolase ISU65_00825 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU65_00830 PF00356 Bacterial regulatory proteins, lacI family ISU65_00840 PF07690 Major Facilitator Superfamily ISU65_00845 PF07969 Amidohydrolase family ISU65_00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_00850 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU65_00850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU65_00850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU65_00850 PF04324 BFD-like [2Fe-2S] binding domain ISU65_00855 PF13806 Rieske-like [2Fe-2S] domain ISU65_00860 PF01226 Formate/nitrite transporter ISU65_00870 PF01695 IstB-like ATP binding protein ISU65_00875 PF02796 Helix-turn-helix domain of resolvase ISU65_00875 PF00665 Integrase core domain ISU65_00885 PF00579 tRNA synthetases class I (W and Y) ISU65_00890 PF13419 Haloacid dehalogenase-like hydrolase ISU65_00895 PF00834 Ribulose-phosphate 3 epimerase family ISU65_00900 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU65_00905 PF05036 Sporulation related domain ISU65_00910 PF01761 3-dehydroquinate synthase ISU65_00915 PF01202 Shikimate kinase ISU65_00920 PF03958 Bacterial type II/III secretion system short domain ISU65_00920 PF00263 Bacterial type II and III secretion system protein ISU65_00945 PF00912 Transglycosylase ISU65_00945 PF17092 Penicillin-binding protein OB-like domain ISU65_00945 PF00905 Penicillin binding protein transpeptidase domain ISU65_00950 PF00293 NUDIX domain ISU65_00955 PF07095 Intracellular growth attenuator protein IgaA ISU65_00960 PF13419 Haloacid dehalogenase-like hydrolase ISU65_00965 PF01479 S4 domain ISU65_00970 PF01430 Hsp33 protein ISU65_00975 PF01293 Phosphoenolpyruvate carboxykinase ISU65_00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_00980 PF00672 HAMP domain ISU65_00980 PF00512 His Kinase A (phospho-acceptor) domain ISU65_00985 PF00072 Response regulator receiver domain ISU65_00985 PF00486 Transcriptional regulatory protein, C terminal ISU65_00990 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU65_00990 PF03449 Transcription elongation factor, N-terminal ISU65_00995 PF09371 Tex-like protein N-terminal domain ISU65_00995 PF00575 S1 RNA binding domain ISU65_00995 PF16921 Tex protein YqgF-like domain ISU65_00995 PF17674 HHH domain ISU65_01000 PF04023 FeoA domain ISU65_01005 PF07664 Ferrous iron transport protein B C terminus ISU65_01005 PF17910 FeoB cytosolic helical domain ISU65_01005 PF07670 Nucleoside recognition ISU65_01005 PF02421 Ferrous iron transport protein B ISU65_01010 PF09012 FeoC like transcriptional regulator ISU65_01015 PF07338 Protein of unknown function (DUF1471) ISU65_01020 PF00561 alpha/beta hydrolase fold ISU65_01025 PF00156 Phosphoribosyl transferase domain ISU65_01030 PF01106 NifU-like domain ISU65_01030 PF01521 Iron-sulphur cluster biosynthesis ISU65_01035 PF02446 4-alpha-glucanotransferase ISU65_01040 PF00343 Carbohydrate phosphorylase ISU65_01045 PF00343 Carbohydrate phosphorylase ISU65_01050 PF17874 MalT-like TPR region ISU65_01050 PF00196 Bacterial regulatory proteins, luxR family ISU65_01055 PF00581 Rhodanese-like domain ISU65_01060 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU65_01060 PF01694 Rhomboid family ISU65_01065 PF00455 DeoR C terminal sensor domain ISU65_01065 PF08220 DeoR-like helix-turn-helix domain ISU65_01090 PF01266 FAD dependent oxidoreductase ISU65_01090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU65_01095 PF00343 Carbohydrate phosphorylase ISU65_01100 PF08323 Starch synthase catalytic domain ISU65_01100 PF00534 Glycosyl transferases group 1 ISU65_01105 PF00483 Nucleotidyl transferase ISU65_01110 PF18390 Glycogen debranching enzyme C-terminal domain ISU65_01110 PF00128 Alpha amylase, catalytic domain ISU65_01110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU65_01115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU65_01115 PF02806 Alpha amylase, C-terminal all-beta domain ISU65_01115 PF00128 Alpha amylase, catalytic domain ISU65_01120 PF06580 Histidine kinase ISU65_01120 PF07694 5TMR of 5TMR-LYT ISU65_01125 PF11924 Inverse autotransporter, beta-domain ISU65_01125 PF02369 Bacterial Ig-like domain (group 1) ISU65_01125 PF09134 Invasin, domain 3 ISU65_01125 PF07979 Intimin C-type lectin domain ISU65_01155 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU65_01155 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU65_01160 PF01914 MarC family integral membrane protein ISU65_01175 PF01202 Shikimate kinase ISU65_01180 PF02447 GntP family permease ISU65_01185 PF00356 Bacterial regulatory proteins, lacI family ISU65_01185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU65_01190 PF17954 Quercetinase C-terminal cupin domain ISU65_01190 PF02678 Pirin ISU65_01200 PF00486 Transcriptional regulatory protein, C terminal ISU65_01200 PF00072 Response regulator receiver domain ISU65_01210 PF01116 Fructose-bisphosphate aldolase class-II ISU65_01220 PF13407 Periplasmic binding protein domain ISU65_01225 PF02653 Branched-chain amino acid transport system / permease component ISU65_01230 PF00005 ABC transporter ISU65_01235 PF13188 PAS domain ISU65_01235 PF08448 PAS fold ISU65_01235 PF00512 His Kinase A (phospho-acceptor) domain ISU65_01235 PF00072 Response regulator receiver domain ISU65_01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_01245 PF01384 Phosphate transporter family ISU65_01250 PF01797 Transposase IS200 like ISU65_01255 PF10625 Universal stress protein B (UspB) ISU65_01260 PF00582 Universal stress protein family ISU65_01265 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU65_01265 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU65_01270 PF00413 Matrixin ISU65_01270 PF08548 Peptidase M10 serralysin C terminal ISU65_01270 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU65_01275 PF04445 Putative SAM-dependent methyltransferase ISU65_01280 PF01432 Peptidase family M3 ISU65_01285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU65_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_01290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU65_01295 PF05651 Putative sugar diacid recognition ISU65_01295 PF13556 PucR C-terminal helix-turn-helix domain ISU65_01295 PF17853 GGDEF-like domain ISU65_01305 PF02447 GntP family permease ISU65_01310 PF02595 Glycerate kinase family ISU65_01335 PF03631 Virulence factor BrkB ISU65_01340 PF02611 CDP-diacylglycerol pyrophosphatase ISU65_01345 PF05170 AsmA family ISU65_01350 PF00563 EAL domain ISU65_01355 PF01361 Tautomerase enzyme ISU65_01360 PF00294 pfkB family carbohydrate kinase ISU65_01365 PF00675 Insulinase (Peptidase family M16) ISU65_01365 PF05193 Peptidase M16 inactive domain ISU65_01370 PF00375 Sodium:dicarboxylate symporter family ISU65_01380 PF06917 Periplasmic pectate lyase ISU65_01385 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU65_01390 PF00563 EAL domain ISU65_01390 PF00672 HAMP domain ISU65_01390 PF00990 Diguanylate cyclase, GGDEF domain ISU65_01390 PF17154 Gammaproteobacterial periplasmic sensor domain ISU65_01395 PF01270 Glycosyl hydrolases family 8 ISU65_01400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_01400 PF00005 ABC transporter ISU65_01405 PF00005 ABC transporter ISU65_01405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_01410 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_01410 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU65_01415 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_01420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_01425 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU65_01425 PF08479 POTRA domain, ShlB-type ISU65_01425 PF17287 POTRA domain ISU65_01430 PF05860 haemagglutination activity domain ISU65_01430 PF04829 Pre-toxin domain with VENN motif ISU65_01430 PF13332 Hemagglutinin repeat ISU65_01430 PF05594 Haemagluttinin repeat ISU65_01440 PF07690 Major Facilitator Superfamily ISU65_01445 PF07730 Histidine kinase ISU65_01445 PF05231 MASE1 ISU65_01445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_01450 PF01695 IstB-like ATP binding protein ISU65_01455 PF00665 Integrase core domain ISU65_01455 PF02796 Helix-turn-helix domain of resolvase ISU65_01480 PF01797 Transposase IS200 like ISU65_01485 PF01797 Transposase IS200 like ISU65_01490 PF01612 3'-5' exonuclease ISU65_01490 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU65_01490 PF00476 DNA polymerase family A ISU65_01490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU65_01495 PF01323 DSBA-like thioredoxin domain ISU65_01500 PF01636 Phosphotransferase enzyme family ISU65_01505 PF06288 Protein of unknown function (DUF1040) ISU65_01510 PF12804 MobA-like NTP transferase domain ISU65_01515 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU65_01520 PF00872 Transposase, Mutator family ISU65_01525 PF01926 50S ribosome-binding GTPase ISU65_01530 PF04220 Der GTPase activator (YihI) ISU65_01535 PF04055 Radical SAM superfamily ISU65_01535 PF06969 HemN C-terminal domain ISU65_01540 PF02954 Bacterial regulatory protein, Fis family ISU65_01540 PF00072 Response regulator receiver domain ISU65_01540 PF00158 Sigma-54 interaction domain ISU65_01545 PF00512 His Kinase A (phospho-acceptor) domain ISU65_01545 PF00989 PAS fold ISU65_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_01550 PF03951 Glutamine synthetase, beta-Grasp domain ISU65_01550 PF00120 Glutamine synthetase, catalytic domain ISU65_01555 PF00009 Elongation factor Tu GTP binding domain ISU65_01555 PF00679 Elongation factor G C-terminus ISU65_01555 PF03144 Elongation factor Tu domain 2 ISU65_01560 PF13419 Haloacid dehalogenase-like hydrolase ISU65_01565 PF03631 Virulence factor BrkB ISU65_01570 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU65_01575 PF01695 IstB-like ATP binding protein ISU65_01580 PF00665 Integrase core domain ISU65_01580 PF02796 Helix-turn-helix domain of resolvase ISU65_01585 PF07728 AAA domain (dynein-related subfamily) ISU65_01585 PF12102 Domain of unknown function (DUF3578) ISU65_01600 PF01555 DNA methylase ISU65_01640 PF05987 Bacterial protein of unknown function (DUF898) ISU65_01650 PF12833 Helix-turn-helix domain ISU65_01655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU65_01660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU65_01670 PF00381 PTS HPr component phosphorylation site ISU65_01670 PF05524 PEP-utilising enzyme, N-terminal ISU65_01670 PF02896 PEP-utilising enzyme, TIM barrel domain ISU65_01670 PF00391 PEP-utilising enzyme, mobile domain ISU65_01670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU65_01675 PF10696 Protein of unknown function (DUF2501) ISU65_01680 PF03992 Antibiotic biosynthesis monooxygenase ISU65_01685 PF01791 DeoC/LacD family aldolase ISU65_01690 PF13407 Periplasmic binding protein domain ISU65_01695 PF02653 Branched-chain amino acid transport system / permease component ISU65_01700 PF02653 Branched-chain amino acid transport system / permease component ISU65_01705 PF00005 ABC transporter ISU65_01720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_01720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_01725 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU65_01740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_01745 PF00873 AcrB/AcrD/AcrF family ISU65_01760 PF01095 Pectinesterase ISU65_01765 PF00990 Diguanylate cyclase, GGDEF domain ISU65_01770 PF07256 Protein of unknown function (DUF1435) ISU65_01780 PF08468 Methyltransferase small domain N-terminal ISU65_01780 PF05175 Methyltransferase small domain ISU65_01785 PF03603 DNA polymerase III psi subunit ISU65_01790 PF00583 Acetyltransferase (GNAT) family ISU65_01795 PF16658 Class II release factor RF3, C-terminal domain ISU65_01795 PF00009 Elongation factor Tu GTP binding domain ISU65_01795 PF03144 Elongation factor Tu domain 2 ISU65_01800 PF04972 BON domain ISU65_01805 PF07043 Protein of unknown function (DUF1328) ISU65_01810 PF01734 Patatin-like phospholipase ISU65_01815 PF01026 TatD related DNase ISU65_01820 PF01773 Na+ dependent nucleoside transporter N-terminus ISU65_01820 PF07662 Na+ dependent nucleoside transporter C-terminus ISU65_01820 PF07670 Nucleoside recognition ISU65_01825 PF01791 DeoC/LacD family aldolase ISU65_01835 PF01676 Metalloenzyme superfamily ISU65_01840 PF01048 Phosphorylase superfamily ISU65_01845 PF10144 Bacterial virulence factor haemolysin ISU65_01850 PF18429 Domain of unknown function (DUF5609) ISU65_01855 PF18073 Rubredoxin metal binding domain ISU65_01860 PF13521 AAA domain ISU65_01860 PF01381 Helix-turn-helix ISU65_01865 PF02661 Fic/DOC family ISU65_01875 PF00691 OmpA family ISU65_01880 PF00990 Diguanylate cyclase, GGDEF domain ISU65_01880 PF17152 Periplasmic sensor domain ISU65_01890 PF00690 Cation transporter/ATPase, N-terminus ISU65_01890 PF00689 Cation transporting ATPase, C-terminus ISU65_01895 PF01464 Transglycosylase SLT domain ISU65_01895 PF14718 Soluble lytic murein transglycosylase L domain ISU65_01900 PF01371 Trp repressor protein ISU65_01905 PF01931 Protein of unknown function DUF84 ISU65_01910 PF00300 Histidine phosphatase superfamily (branch 1) ISU65_01915 PF06445 GyrI-like small molecule binding domain ISU65_01915 PF12833 Helix-turn-helix domain ISU65_01920 PF05981 CreA protein ISU65_01925 PF00072 Response regulator receiver domain ISU65_01925 PF00486 Transcriptional regulatory protein, C terminal ISU65_01930 PF08254 Threonine leader peptide ISU65_01935 PF01842 ACT domain ISU65_01935 PF13840 ACT domain ISU65_01935 PF00696 Amino acid kinase family ISU65_01935 PF03447 Homoserine dehydrogenase, NAD binding domain ISU65_01935 PF00742 Homoserine dehydrogenase ISU65_01940 PF08544 GHMP kinases C terminal ISU65_01940 PF00288 GHMP kinases N terminal domain ISU65_01945 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_01945 PF14821 Threonine synthase N terminus ISU65_01950 PF03883 Peroxide stress protein YaaA ISU65_01960 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU65_01965 PF00994 Probable molybdopterin binding domain ISU65_01970 PF07690 Major Facilitator Superfamily ISU65_01980 PF01184 GPR1/FUN34/yaaH family ISU65_01985 PF00012 Hsp70 protein ISU65_01990 PF00226 DnaJ domain ISU65_01990 PF01556 DnaJ C terminal domain ISU65_01990 PF00684 DnaJ central domain ISU65_01995 PF06965 Na+/H+ antiporter 1 ISU65_02000 PF03466 LysR substrate binding domain ISU65_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_02005 PF01649 Ribosomal protein S20 ISU65_02010 PF01687 Riboflavin kinase ISU65_02010 PF06574 FAD synthetase ISU65_02015 PF06827 Zinc finger found in FPG and IleRS ISU65_02015 PF08264 Anticodon-binding domain of tRNA ISU65_02015 PF00133 tRNA synthetases class I (I, L, M and V) ISU65_02020 PF01252 Signal peptidase (SPase) II ISU65_02025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU65_02030 PF02401 LytB protein ISU65_02035 PF01797 Transposase IS200 like ISU65_02040 PF05173 Dihydrodipicolinate reductase, C-terminus ISU65_02040 PF01113 Dihydrodipicolinate reductase, N-terminus ISU65_02045 PF00117 Glutamine amidotransferase class-I ISU65_02045 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU65_02050 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU65_02050 PF02142 MGS-like domain ISU65_02050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU65_02055 PF01810 LysE type translocator ISU65_02060 PF06738 Putative threonine/serine exporter ISU65_02065 PF12821 Threonine/Serine exporter, ThrE ISU65_02070 PF00186 Dihydrofolate reductase ISU65_02075 PF01797 Transposase IS200 like ISU65_02090 PF00149 Calcineurin-like phosphoesterase ISU65_02095 PF04379 ApaG domain ISU65_02100 PF00398 Ribosomal RNA adenine dimethylase ISU65_02105 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU65_02110 PF09312 SurA N-terminal domain ISU65_02110 PF00639 PPIC-type PPIASE domain ISU65_02115 PF03968 OstA-like protein ISU65_02115 PF04453 LPS transport system D ISU65_02120 PF00226 DnaJ domain ISU65_02120 PF05099 Tellurite resistance protein TerB ISU65_02125 PF00849 RNA pseudouridylate synthase ISU65_02140 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU65_02145 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU65_02160 PF05947 Type VI secretion system, TssF ISU65_02170 PF01695 IstB-like ATP binding protein ISU65_02175 PF02796 Helix-turn-helix domain of resolvase ISU65_02175 PF00665 Integrase core domain ISU65_02185 PF17871 AAA lid domain ISU65_02185 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_02185 PF07724 AAA domain (Cdc48 subfamily) ISU65_02185 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_02190 PF06715 Gp5 C-terminal repeat (3 copies) ISU65_02190 PF04717 Type VI secretion system, phage-baseplate injector ISU65_02220 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU65_02225 PF05736 OprF membrane domain ISU65_02225 PF00691 OmpA family ISU65_02240 PF18337 RapA N-terminal Tudor like domain ISU65_02240 PF12137 RNA polymerase recycling family C-terminal ISU65_02240 PF00176 SNF2 family N-terminal domain ISU65_02240 PF00271 Helicase conserved C-terminal domain ISU65_02240 PF18339 RapA N-terminal Tudor like domain 1 ISU65_02245 PF00136 DNA polymerase family B ISU65_02245 PF03104 DNA polymerase family B, exonuclease domain ISU65_02250 PF09335 SNARE associated Golgi protein ISU65_02255 PF00005 ABC transporter ISU65_02260 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_02270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_02270 PF12793 Sugar transport-related sRNA regulator N-term ISU65_02275 PF07690 Major Facilitator Superfamily ISU65_02280 PF00694 Aconitase C-terminal domain ISU65_02285 PF00330 Aconitase family (aconitate hydratase) ISU65_02290 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU65_02295 PF08502 LeuA allosteric (dimerisation) domain ISU65_02295 PF00682 HMGL-like ISU65_02300 PF01797 Transposase IS200 like ISU65_02310 PF03466 LysR substrate binding domain ISU65_02310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_02315 PF00501 AMP-binding enzyme ISU65_02320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU65_02320 PF00205 Thiamine pyrophosphate enzyme, central domain ISU65_02320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU65_02325 PF10369 Small subunit of acetolactate synthase ISU65_02330 PF01797 Transposase IS200 like ISU65_02335 PF00356 Bacterial regulatory proteins, lacI family ISU65_02335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU65_02340 PF06610 L-alanine exporter ISU65_02350 PF02381 MraZ protein, putative antitoxin-like ISU65_02355 PF01795 MraW methylase family ISU65_02360 PF04999 Cell division protein FtsL ISU65_02365 PF03717 Penicillin-binding Protein dimerisation domain ISU65_02365 PF00905 Penicillin binding protein transpeptidase domain ISU65_02370 PF01225 Mur ligase family, catalytic domain ISU65_02370 PF02875 Mur ligase family, glutamate ligase domain ISU65_02370 PF08245 Mur ligase middle domain ISU65_02375 PF08245 Mur ligase middle domain ISU65_02375 PF02875 Mur ligase family, glutamate ligase domain ISU65_02375 PF01225 Mur ligase family, catalytic domain ISU65_02380 PF00953 Glycosyl transferase family 4 ISU65_02380 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU65_02385 PF08245 Mur ligase middle domain ISU65_02385 PF02875 Mur ligase family, glutamate ligase domain ISU65_02390 PF01098 Cell cycle protein ISU65_02395 PF04101 Glycosyltransferase family 28 C-terminal domain ISU65_02395 PF03033 Glycosyltransferase family 28 N-terminal domain ISU65_02400 PF01225 Mur ligase family, catalytic domain ISU65_02400 PF02875 Mur ligase family, glutamate ligase domain ISU65_02400 PF08245 Mur ligase middle domain ISU65_02405 PF07478 D-ala D-ala ligase C-terminus ISU65_02405 PF01820 D-ala D-ala ligase N-terminus ISU65_02410 PF03799 Cell division protein FtsQ ISU65_02410 PF08478 POTRA domain, FtsQ-type ISU65_02415 PF02491 SHS2 domain inserted in FTSA ISU65_02420 PF12327 FtsZ family, C-terminal domain ISU65_02420 PF00091 Tubulin/FtsZ family, GTPase domain ISU65_02425 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU65_02435 PF06558 Secretion monitor precursor protein (SecM) ISU65_02440 PF01043 SecA preprotein cross-linking domain ISU65_02440 PF07517 SecA DEAD-like domain ISU65_02440 PF02810 SEC-C motif ISU65_02440 PF07516 SecA Wing and Scaffold domain ISU65_02450 PF00293 NUDIX domain ISU65_02455 PF01695 IstB-like ATP binding protein ISU65_02460 PF02796 Helix-turn-helix domain of resolvase ISU65_02460 PF00665 Integrase core domain ISU65_02470 PF07681 DoxX ISU65_02480 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU65_02485 PF05957 Bacterial protein of unknown function (DUF883) ISU65_02495 PF13721 SecD export protein N-terminal TM region ISU65_02500 PF09335 SNARE associated Golgi protein ISU65_02510 PF07729 FCD domain ISU65_02510 PF00392 Bacterial regulatory proteins, gntR family ISU65_02515 PF07690 Major Facilitator Superfamily ISU65_02520 PF02614 Glucuronate isomerase ISU65_02525 PF08125 Mannitol dehydrogenase C-terminal domain ISU65_02525 PF01232 Mannitol dehydrogenase Rossmann domain ISU65_02530 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU65_02530 PF08666 SAF domain ISU65_02535 PF10688 Bacterial inner membrane protein ISU65_02540 PF01797 Transposase IS200 like ISU65_02545 PF00375 Sodium:dicarboxylate symporter family ISU65_02550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU65_02555 PF01863 Protein of unknown function DUF45 ISU65_02560 PF03797 Autotransporter beta-domain ISU65_02565 PF05175 Methyltransferase small domain ISU65_02570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU65_02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_02575 PF03729 Short repeat of unknown function (DUF308) ISU65_02590 PF00092 von Willebrand factor type A domain ISU65_02600 PF02342 TerD domain ISU65_02605 PF00092 von Willebrand factor type A domain ISU65_02610 PF08479 POTRA domain, ShlB-type ISU65_02610 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU65_02610 PF17287 POTRA domain ISU65_02615 PF13018 Extended Signal Peptide of Type V secretion system ISU65_02615 PF13332 Hemagglutinin repeat ISU65_02615 PF05860 haemagglutination activity domain ISU65_02615 PF04829 Pre-toxin domain with VENN motif ISU65_02625 PF04829 Pre-toxin domain with VENN motif ISU65_02625 PF13332 Hemagglutinin repeat ISU65_02630 PF04829 Pre-toxin domain with VENN motif ISU65_02630 PF13332 Hemagglutinin repeat ISU65_02645 PF13332 Hemagglutinin repeat ISU65_02645 PF13018 Extended Signal Peptide of Type V secretion system ISU65_02645 PF04829 Pre-toxin domain with VENN motif ISU65_02645 PF05860 haemagglutination activity domain ISU65_02650 PF04829 Pre-toxin domain with VENN motif ISU65_02650 PF13018 Extended Signal Peptide of Type V secretion system ISU65_02650 PF13332 Hemagglutinin repeat ISU65_02650 PF05860 haemagglutination activity domain ISU65_02670 PF00005 ABC transporter ISU65_02670 PF17912 MalK OB fold domain ISU65_02670 PF03459 TOBE domain ISU65_02675 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU65_02680 PF00356 Bacterial regulatory proteins, lacI family ISU65_02685 PF01547 Bacterial extracellular solute-binding protein ISU65_02690 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_02695 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_02705 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU65_02705 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU65_02705 PF14310 Fibronectin type III-like domain ISU65_02715 PF04632 Fusaric acid resistance protein family ISU65_02720 PF00529 HlyD membrane-fusion protein of T1SS ISU65_02720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_02735 PF00155 Aminotransferase class I and II ISU65_02755 PF01042 Endoribonuclease L-PSP ISU65_02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_02775 PF03466 LysR substrate binding domain ISU65_02820 PF04545 Sigma-70, region 4 ISU65_02820 PF04546 Sigma-70, non-essential region ISU65_02820 PF03979 Sigma-70 factor, region 1.1 ISU65_02820 PF00140 Sigma-70 factor, region 1.2 ISU65_02820 PF04542 Sigma-70 region 2 ISU65_02820 PF04539 Sigma-70 region 3 ISU65_02825 PF10410 DnaB-helicase binding domain of primase ISU65_02825 PF08278 DNA primase DnaG DnaB-binding ISU65_02825 PF08275 DNA primase catalytic core, N-terminal domain ISU65_02825 PF01807 CHC2 zinc finger ISU65_02830 PF01165 Ribosomal protein S21 ISU65_02835 PF00814 Glycoprotease family ISU65_02840 PF02660 Glycerol-3-phosphate acyltransferase ISU65_02845 PF02152 Dihydroneopterin aldolase ISU65_02850 PF02673 Bacitracin resistance protein BacA ISU65_02855 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU65_02855 PF01966 HD domain ISU65_02855 PF01743 Poly A polymerase head domain ISU65_02860 PF08239 Bacterial SH3 domain ISU65_02865 PF01928 CYTH domain ISU65_02870 PF08335 GlnD PII-uridylyltransferase ISU65_02870 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU65_02875 PF01467 Cytidylyltransferase-like ISU65_02875 PF00294 pfkB family carbohydrate kinase ISU65_02880 PF13520 Amino acid permease ISU65_02890 PF04380 Membrane fusogenic activity ISU65_02895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU65_02900 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU65_02905 PF03738 Glutathionylspermidine synthase preATP-grasp ISU65_02910 PF06693 Protein of unknown function (DUF1190) ISU65_02915 PF02321 Outer membrane efflux protein ISU65_02920 PF00293 NUDIX domain ISU65_02925 PF06853 Protein of unknown function (DUF1249) ISU65_02930 PF00149 Calcineurin-like phosphoesterase ISU65_02935 PF05728 Uncharacterised protein family (UPF0227) ISU65_02940 PF00986 DNA gyrase B subunit, carboxyl terminus ISU65_02940 PF00204 DNA gyrase B ISU65_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_02940 PF01751 Toprim domain ISU65_02945 PF03466 LysR substrate binding domain ISU65_02945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_02950 PF02525 Flavodoxin-like fold ISU65_02960 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU65_02960 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU65_02965 PF01553 Acyltransferase ISU65_02970 PF07731 Multicopper oxidase ISU65_02970 PF07732 Multicopper oxidase ISU65_02980 PF00248 Aldo/keto reductase family ISU65_02990 PF00465 Iron-containing alcohol dehydrogenase ISU65_02995 PF06719 AraC-type transcriptional regulator N-terminus ISU65_02995 PF12833 Helix-turn-helix domain ISU65_03000 PF09335 SNARE associated Golgi protein ISU65_03005 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU65_03010 PF01618 MotA/TolQ/ExbB proton channel family ISU65_03015 PF02472 Biopolymer transport protein ExbD/TolR ISU65_03050 PF00437 Type II/IV secretion system protein ISU65_03065 PF04972 BON domain ISU65_03065 PF13629 Pilus formation protein N terminal region ISU65_03065 PF00263 Bacterial type II and III secretion system protein ISU65_03070 PF00263 Bacterial type II and III secretion system protein ISU65_03070 PF04972 BON domain ISU65_03070 PF13629 Pilus formation protein N terminal region ISU65_03085 PF01797 Transposase IS200 like ISU65_03090 PF00577 Outer membrane usher protein ISU65_03090 PF13953 PapC C-terminal domain ISU65_03090 PF13954 PapC N-terminal domain ISU65_03095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_03095 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_03100 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU65_03100 PF00419 Fimbrial protein ISU65_03105 PF01497 Periplasmic binding protein ISU65_03125 PF01312 FlhB HrpN YscU SpaS Family ISU65_03130 PF01311 Bacterial export proteins, family 1 ISU65_03135 PF01313 Bacterial export proteins, family 3 ISU65_03140 PF00813 FliP family ISU65_03145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU65_03155 PF00072 Response regulator receiver domain ISU65_03155 PF02954 Bacterial regulatory protein, Fis family ISU65_03155 PF00158 Sigma-54 interaction domain ISU65_03160 PF02049 Flagellar hook-basal body complex protein FliE ISU65_03165 PF01514 Secretory protein of YscJ/FliF family ISU65_03165 PF08345 Flagellar M-ring protein C-terminal ISU65_03180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU65_03180 PF18269 T3SS EscN ATPase C-terminal domain ISU65_03200 PF13144 Chaperone for flagella basal body P-ring formation ISU65_03205 PF00460 Flagella basal body rod protein ISU65_03210 PF00460 Flagella basal body rod protein ISU65_03210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU65_03215 PF03963 Flagellar hook capping protein - N-terminal region ISU65_03215 PF13860 FlgD Ig-like domain ISU65_03215 PF13861 FlgD Tudor-like domain ISU65_03220 PF07559 Flagellar basal body protein FlaE ISU65_03220 PF00460 Flagella basal body rod protein ISU65_03220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU65_03225 PF00460 Flagella basal body rod protein ISU65_03225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU65_03230 PF00460 Flagella basal body rod protein ISU65_03230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU65_03235 PF02107 Flagellar L-ring protein ISU65_03240 PF02119 Flagellar P-ring protein ISU65_03270 PF18500 CadC C-terminal domain 1 ISU65_03270 PF00486 Transcriptional regulatory protein, C terminal ISU65_03275 PF00669 Bacterial flagellin N-terminal helical region ISU65_03275 PF00700 Bacterial flagellin C-terminal helical region ISU65_03290 PF00356 Bacterial regulatory proteins, lacI family ISU65_03295 PF00939 Sodium:sulfate symporter transmembrane region ISU65_03310 PF05593 RHS Repeat ISU65_03310 PF03527 RHS protein ISU65_03320 PF04717 Type VI secretion system, phage-baseplate injector ISU65_03325 PF12951 Passenger-associated-transport-repeat ISU65_03335 PF02447 GntP family permease ISU65_03350 PF00664 ABC transporter transmembrane region ISU65_03350 PF00005 ABC transporter ISU65_03355 PF04954 Siderophore-interacting protein ISU65_03355 PF08021 Siderophore-interacting FAD-binding domain ISU65_03355 PF00664 ABC transporter transmembrane region ISU65_03355 PF00005 ABC transporter ISU65_03365 PF00975 Thioesterase domain ISU65_03380 PF08242 Methyltransferase domain ISU65_03380 PF00550 Phosphopantetheine attachment site ISU65_03380 PF00501 AMP-binding enzyme ISU65_03380 PF00668 Condensation domain ISU65_03385 PF00501 AMP-binding enzyme ISU65_03385 PF13193 AMP-binding enzyme C-terminal domain ISU65_03385 PF00668 Condensation domain ISU65_03390 PF08242 Methyltransferase domain ISU65_03390 PF00550 Phosphopantetheine attachment site ISU65_03390 PF00668 Condensation domain ISU65_03390 PF00501 AMP-binding enzyme ISU65_03395 PF01695 IstB-like ATP binding protein ISU65_03400 PF00665 Integrase core domain ISU65_03400 PF02796 Helix-turn-helix domain of resolvase ISU65_03405 PF01797 Transposase IS200 like ISU65_03410 PF03884 DNA gyrase inhibitor YacG ISU65_03415 PF07072 Cell division protein ISU65_03420 PF01121 Dephospho-CoA kinase ISU65_03425 PF00478 IMP dehydrogenase / GMP reductase domain ISU65_03430 PF00482 Type II secretion system (T2SS), protein F ISU65_03435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU65_03435 PF00437 Type II/IV secretion system protein ISU65_03440 PF07963 Prokaryotic N-terminal methylation motif ISU65_03445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU65_03445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU65_03450 PF01510 N-acetylmuramoyl-L-alanine amidase ISU65_03455 PF17113 Regulatory signalling modulator protein AmpE ISU65_03460 PF00324 Amino acid permease ISU65_03465 PF07729 FCD domain ISU65_03465 PF00392 Bacterial regulatory proteins, gntR family ISU65_03470 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU65_03470 PF00456 Transketolase, thiamine diphosphate binding domain ISU65_03475 PF00364 Biotin-requiring enzyme ISU65_03475 PF02817 e3 binding domain ISU65_03475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU65_03480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU65_03480 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_03485 PF01797 Transposase IS200 like ISU65_03490 PF00330 Aconitase family (aconitate hydratase) ISU65_03490 PF06434 Aconitate hydratase 2 N-terminus ISU65_03490 PF11791 Aconitate B N-terminal domain ISU65_03495 PF06062 Uncharacterised protein family (UPF0231) ISU65_03500 PF00892 EamA-like transporter family ISU65_03505 PF02675 S-adenosylmethionine decarboxylase ISU65_03510 PF17284 Spermidine synthase tetramerisation domain ISU65_03515 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU65_03520 PF07731 Multicopper oxidase ISU65_03520 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU65_03520 PF07732 Multicopper oxidase ISU65_03520 PF00394 Multicopper oxidase ISU65_03525 PF00156 Phosphoribosyl transferase domain ISU65_03530 PF00484 Carbonic anhydrase ISU65_03535 PF00005 ABC transporter ISU65_03540 PF01061 ABC-2 type transporter ISU65_03550 PF02261 Aspartate decarboxylase ISU65_03555 PF02569 Pantoate-beta-alanine ligase ISU65_03560 PF02548 Ketopantoate hydroxymethyltransferase ISU65_03565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU65_03570 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU65_03570 PF12626 Polymerase A arginine-rich C-terminus ISU65_03570 PF01743 Poly A polymerase head domain ISU65_03575 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU65_03580 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU65_03585 PF03749 Sugar fermentation stimulation protein RE domain ISU65_03585 PF17746 SfsA N-terminal OB domain ISU65_03590 PF02834 LigT like Phosphoesterase ISU65_03595 PF04408 Helicase associated domain (HA2) ISU65_03595 PF00270 DEAD/DEAH box helicase ISU65_03595 PF00271 Helicase conserved C-terminal domain ISU65_03595 PF08482 ATP-dependent helicase C-terminal ISU65_03600 PF14814 Bifunctional transglycosylase second domain ISU65_03600 PF00905 Penicillin binding protein transpeptidase domain ISU65_03600 PF00912 Transglycosylase ISU65_03600 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU65_03605 PF00005 ABC transporter ISU65_03610 PF01497 Periplasmic binding protein ISU65_03615 PF01032 FecCD transport family ISU65_03620 PF00202 Aminotransferase class-III ISU65_03625 PF00654 Voltage gated chloride channel ISU65_03630 PF01521 Iron-sulphur cluster biosynthesis ISU65_03635 PF03458 UPF0126 domain ISU65_03640 PF01497 Periplasmic binding protein ISU65_03645 PF01048 Phosphorylase superfamily ISU65_03650 PF01966 HD domain ISU65_03650 PF13286 Phosphohydrolase-associated domain ISU65_03655 PF00595 PDZ domain ISU65_03660 PF00512 His Kinase A (phospho-acceptor) domain ISU65_03660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU65_03660 PF00672 HAMP domain ISU65_03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_03660 PF00072 Response regulator receiver domain ISU65_03660 PF01627 Hpt domain ISU65_03670 PF01938 TRAM domain ISU65_03670 PF05958 tRNA (Uracil-5-)-methyltransferase ISU65_03675 PF04607 Region found in RelA / SpoT proteins ISU65_03675 PF02824 TGS domain ISU65_03675 PF13291 ACT domain ISU65_03680 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU65_03685 PF00117 Glutamine amidotransferase class-I ISU65_03685 PF06418 CTP synthase N-terminus ISU65_03690 PF00113 Enolase, C-terminal TIM barrel domain ISU65_03690 PF03952 Enolase, N-terminal domain ISU65_03695 PF00080 Copper/zinc superoxide dismutase (SODC) ISU65_03700 PF04055 Radical SAM superfamily ISU65_03705 PF01242 6-pyruvoyl tetrahydropterin synthase ISU65_03710 PF00175 Oxidoreductase NAD-binding domain ISU65_03710 PF00258 Flavodoxin ISU65_03710 PF00667 FAD binding domain ISU65_03750 PF01507 Phosphoadenosine phosphosulfate reductase family ISU65_03755 PF00009 Elongation factor Tu GTP binding domain ISU65_03765 PF12084 Protein of unknown function (DUF3561) ISU65_03770 PF04977 Septum formation initiator ISU65_03775 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU65_03780 PF02542 YgbB family ISU65_03785 PF01142 tRNA pseudouridine synthase D (TruD) ISU65_03790 PF01975 Survival protein SurE ISU65_03800 PF01476 LysM domain ISU65_03800 PF01551 Peptidase family M23 ISU65_03805 PF04545 Sigma-70, region 4 ISU65_03805 PF04539 Sigma-70 region 3 ISU65_03805 PF04542 Sigma-70 region 2 ISU65_03805 PF00140 Sigma-70 factor, region 1.2 ISU65_03810 PF05188 MutS domain II ISU65_03810 PF05192 MutS domain III ISU65_03810 PF01624 MutS domain I ISU65_03810 PF05190 MutS family domain IV ISU65_03810 PF00488 MutS domain V ISU65_03815 PF02502 Ribose/Galactose Isomerase ISU65_03820 PF00107 Zinc-binding dehydrogenase ISU65_03820 PF08240 Alcohol dehydrogenase GroES-like domain ISU65_03830 PF02733 Dak1 domain ISU65_03835 PF02734 DAK2 domain ISU65_03840 PF13936 Helix-turn-helix domain ISU65_03840 PF04198 Putative sugar-binding domain ISU65_03845 PF02040 Arsenical pump membrane protein ISU65_03850 PF01022 Bacterial regulatory protein, arsR family ISU65_03865 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_03870 PF00034 Cytochrome c ISU65_03870 PF14376 Haem-binding domain ISU65_03870 PF03150 Di-haem cytochrome c peroxidase ISU65_03880 PF07715 TonB-dependent Receptor Plug Domain ISU65_03880 PF00593 TonB dependent receptor ISU65_03890 PF00557 Metallopeptidase family M24 ISU65_03900 PF05683 Fumarase C-terminus ISU65_03900 PF05681 Fumarate hydratase (Fumerase) ISU65_03905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_03905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_03910 PF01261 Xylose isomerase-like TIM barrel ISU65_03915 PF02653 Branched-chain amino acid transport system / permease component ISU65_03920 PF02653 Branched-chain amino acid transport system / permease component ISU65_03925 PF00005 ABC transporter ISU65_03930 PF01797 Transposase IS200 like ISU65_03940 PF08220 DeoR-like helix-turn-helix domain ISU65_03940 PF00455 DeoR C terminal sensor domain ISU65_03945 PF00596 Class II Aldolase and Adducin N-terminal domain ISU65_03950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU65_03950 PF00384 Molybdopterin oxidoreductase ISU65_03950 PF01568 Molydopterin dinucleotide binding domain ISU65_03955 PF12800 4Fe-4S binding domain ISU65_03955 PF13247 4Fe-4S dicluster domain ISU65_03960 PF04976 DMSO reductase anchor subunit (DmsC) ISU65_03965 PF02613 Nitrate reductase delta subunit ISU65_03970 PF01292 Prokaryotic cytochrome b561 ISU65_03975 PF07361 Cytochrome b562 ISU65_03980 PF00141 Peroxidase ISU65_03985 PF13407 Periplasmic binding protein domain ISU65_03995 PF00005 ABC transporter ISU65_04000 PF02653 Branched-chain amino acid transport system / permease component ISU65_04005 PF00456 Transketolase, thiamine diphosphate binding domain ISU65_04010 PF02780 Transketolase, C-terminal domain ISU65_04010 PF02779 Transketolase, pyrimidine binding domain ISU65_04015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_04015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_04030 PF07690 Major Facilitator Superfamily ISU65_04035 PF02464 Competence-damaged protein ISU65_04040 PF00154 recA bacterial DNA recombination protein ISU65_04045 PF02631 RecX family ISU65_04050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU65_04050 PF02272 DHHA1 domain ISU65_04050 PF01411 tRNA synthetases class II (A) ISU65_04055 PF02599 Global regulator protein family ISU65_04085 PF13419 Haloacid dehalogenase-like hydrolase ISU65_04090 PF09335 SNARE associated Golgi protein ISU65_04095 PF04262 Glutamate-cysteine ligase ISU65_04100 PF02664 S-Ribosylhomocysteinase (LuxS) ISU65_04105 PF01797 Transposase IS200 like ISU65_04110 PF00571 CBS domain ISU65_04110 PF03471 Transporter associated domain ISU65_04110 PF01595 Cyclin M transmembrane N-terminal domain ISU65_04115 PF01578 Cytochrome C assembly protein ISU65_04120 PF02881 SRP54-type protein, helical bundle domain ISU65_04120 PF00448 SRP54-type protein, GTPase domain ISU65_04120 PF02978 Signal peptide binding domain ISU65_04125 PF00886 Ribosomal protein S16 ISU65_04130 PF01782 RimM N-terminal domain ISU65_04130 PF05239 PRC-barrel domain ISU65_04135 PF01746 tRNA (Guanine-1)-methyltransferase ISU65_04140 PF01245 Ribosomal protein L19 ISU65_04145 PF01797 Transposase IS200 like ISU65_04150 PF04338 Protein of unknown function, DUF481 ISU65_04160 PF04397 LytTr DNA-binding domain ISU65_04160 PF00072 Response regulator receiver domain ISU65_04165 PF00793 DAHP synthetase I family ISU65_04170 PF01817 Chorismate mutase type II ISU65_04170 PF02153 Prephenate dehydrogenase ISU65_04180 PF01695 IstB-like ATP binding protein ISU65_04185 PF02796 Helix-turn-helix domain of resolvase ISU65_04185 PF00665 Integrase core domain ISU65_04195 PF01797 Transposase IS200 like ISU65_04200 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU65_04205 PF13525 Outer membrane lipoprotein ISU65_04210 PF00849 RNA pseudouridylate synthase ISU65_04210 PF01479 S4 domain ISU65_04215 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU65_04220 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_04220 PF07724 AAA domain (Cdc48 subfamily) ISU65_04220 PF17871 AAA lid domain ISU65_04220 PF02861 Clp amino terminal domain, pathogenicity island component ISU65_04220 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_04250 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU65_04255 PF13091 PLD-like domain ISU65_04260 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU65_04260 PF00583 Acetyltransferase (GNAT) family ISU65_04260 PF13380 CoA binding domain ISU65_04265 PF03942 DTW domain ISU65_04270 PF00085 Thioredoxin ISU65_04275 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU65_04275 PF00588 SpoU rRNA Methylase family ISU65_04280 PF07690 Major Facilitator Superfamily ISU65_04285 PF00529 HlyD membrane-fusion protein of T1SS ISU65_04285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_04290 PF01047 MarR family ISU65_04295 PF05437 Branched-chain amino acid transport protein (AzlD) ISU65_04300 PF03591 AzlC protein ISU65_04305 PF07690 Major Facilitator Superfamily ISU65_04315 PF01425 Amidase ISU65_04330 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_04335 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_04340 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_04345 PF00005 ABC transporter ISU65_04350 PF00266 Aminotransferase class-V ISU65_04355 PF01695 IstB-like ATP binding protein ISU65_04360 PF02796 Helix-turn-helix domain of resolvase ISU65_04360 PF00665 Integrase core domain ISU65_04365 PF00266 Aminotransferase class-V ISU65_04370 PF07687 Peptidase dimerisation domain ISU65_04370 PF01546 Peptidase family M20/M25/M40 ISU65_04380 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU65_04380 PF08479 POTRA domain, ShlB-type ISU65_04390 PF18071 HMW1C N-terminal ISU65_04390 PF18254 HMW1 domain 2 ISU65_04400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU65_04400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU65_04400 PF09317 Domain of unknown function (DUF1974) ISU65_04405 PF13580 SIS domain ISU65_04410 PF13230 Glutamine amidotransferases class-II ISU65_04415 PF03734 L,D-transpeptidase catalytic domain ISU65_04420 PF11973 NQRA C-terminal domain ISU65_04420 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU65_04425 PF03116 NQR2, RnfD, RnfE family ISU65_04430 PF04205 FMN-binding domain ISU65_04435 PF02508 Rnf-Nqr subunit, membrane protein ISU65_04440 PF02508 Rnf-Nqr subunit, membrane protein ISU65_04445 PF00175 Oxidoreductase NAD-binding domain ISU65_04445 PF00970 Oxidoreductase FAD-binding domain ISU65_04445 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU65_04450 PF02424 ApbE family ISU65_04460 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU65_04465 PF11798 IMS family HHH motif ISU65_04465 PF00817 impB/mucB/samB family ISU65_04465 PF11799 impB/mucB/samB family C-terminal domain ISU65_04470 PF01546 Peptidase family M20/M25/M40 ISU65_04470 PF07687 Peptidase dimerisation domain ISU65_04475 PF03466 LysR substrate binding domain ISU65_04475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_04490 PF00156 Phosphoribosyl transferase domain ISU65_04495 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU65_04500 PF07417 Sigma factor-binding transcriptional regulator Crl ISU65_04505 PF01472 PUA domain ISU65_04505 PF00696 Amino acid kinase family ISU65_04510 PF00171 Aldehyde dehydrogenase family ISU65_04515 PF07238 PilZ domain ISU65_04515 PF07317 Flagellar regulator YcgR ISU65_04525 PF08241 Methyltransferase domain ISU65_04535 PF01202 Shikimate kinase ISU65_04540 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU65_04545 PF04381 Putative exonuclease, RdgC ISU65_04550 PF00480 ROK family ISU65_04555 PF13476 AAA domain ISU65_04560 PF00149 Calcineurin-like phosphoesterase ISU65_04560 PF12320 Type 5 capsule protein repressor C-terminal domain ISU65_04565 PF00486 Transcriptional regulatory protein, C terminal ISU65_04565 PF00072 Response regulator receiver domain ISU65_04570 PF00989 PAS fold ISU65_04570 PF11808 Phosphate regulon sensor protein PhoR ISU65_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_04570 PF00512 His Kinase A (phospho-acceptor) domain ISU65_04575 PF12849 PBP superfamily domain ISU65_04580 PF05525 Branched-chain amino acid transport protein ISU65_04585 PF00324 Amino acid permease ISU65_04590 PF00128 Alpha amylase, catalytic domain ISU65_04590 PF02903 Alpha amylase, N-terminal ig-like domain ISU65_04610 PF00578 AhpC/TSA family ISU65_04610 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU65_04615 PF04336 Acyl carrier protein phosphodiesterase ISU65_04620 PF02547 Queuosine biosynthesis protein ISU65_04625 PF01702 Queuine tRNA-ribosyltransferase ISU65_04630 PF02699 Preprotein translocase subunit ISU65_04640 PF07549 SecD/SecF GG Motif ISU65_04640 PF02355 Protein export membrane protein ISU65_04645 PF01797 Transposase IS200 like ISU65_04660 PF03477 ATP cone domain ISU65_04665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU65_04665 PF01872 RibD C-terminal domain ISU65_04670 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU65_04675 PF01029 NusB family ISU65_04680 PF00586 AIR synthase related protein, N-terminal domain ISU65_04680 PF02769 AIR synthase related protein, C-terminal domain ISU65_04685 PF04608 Phosphatidylglycerophosphatase A ISU65_04690 PF01797 Transposase IS200 like ISU65_04695 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU65_04695 PF02780 Transketolase, C-terminal domain ISU65_04695 PF02779 Transketolase, pyrimidine binding domain ISU65_04700 PF00348 Polyprenyl synthetase ISU65_04705 PF02609 Exonuclease VII small subunit ISU65_04710 PF02568 Thiamine biosynthesis protein (ThiI) ISU65_04710 PF02926 THUMP domain ISU65_04715 PF01965 DJ-1/PfpI family ISU65_04720 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU65_04720 PF02558 Ketopantoate reductase PanE/ApbA ISU65_04725 PF04461 Protein of unknown function (DUF520) ISU65_04730 PF07690 Major Facilitator Superfamily ISU65_04735 PF01040 UbiA prenyltransferase family ISU65_04740 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU65_04745 PF00510 Cytochrome c oxidase subunit III ISU65_04750 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU65_04755 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU65_04755 PF06481 COX Aromatic Rich Motif ISU65_04760 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU65_04765 PF07690 Major Facilitator Superfamily ISU65_04770 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU65_04770 PF03923 Uncharacterized lipoprotein ISU65_04775 PF01722 BolA-like protein ISU65_04780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU65_04780 PF05697 Bacterial trigger factor protein (TF) ISU65_04780 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU65_04785 PF00574 Clp protease ISU65_04790 PF06689 ClpX C4-type zinc finger ISU65_04790 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_04790 PF07724 AAA domain (Cdc48 subfamily) ISU65_04795 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU65_04795 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU65_04795 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_04800 PF00216 Bacterial DNA-binding protein ISU65_04805 PF13145 PPIC-type PPIASE domain ISU65_04820 PF06508 Queuosine biosynthesis protein QueC ISU65_04825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_04825 PF12793 Sugar transport-related sRNA regulator N-term ISU65_04835 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_04840 PF13404 AsnC-type helix-turn-helix domain ISU65_04840 PF01037 Lrp/AsnC ligand binding domain ISU65_04845 PF00664 ABC transporter transmembrane region ISU65_04845 PF00005 ABC transporter ISU65_04850 PF00664 ABC transporter transmembrane region ISU65_04850 PF00005 ABC transporter ISU65_04855 PF00543 Nitrogen regulatory protein P-II ISU65_04865 PF00665 Integrase core domain ISU65_04865 PF02796 Helix-turn-helix domain of resolvase ISU65_04870 PF01695 IstB-like ATP binding protein ISU65_04885 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU65_04890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU65_04900 PF05321 Haemolysin expression modulating protein ISU65_04905 PF10757 Biofilm formation regulator YbaJ ISU65_04915 PF00444 Ribosomal protein L36 ISU65_04920 PF01197 Ribosomal protein L31 ISU65_04925 PF00873 AcrB/AcrD/AcrF family ISU65_04930 PF00529 HlyD membrane-fusion protein of T1SS ISU65_04930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_04935 PF00440 Bacterial regulatory proteins, tetR family ISU65_04935 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU65_04940 PF02635 DsrE/DsrF-like family ISU65_04945 PF00924 Mechanosensitive ion channel ISU65_04945 PF12795 Mechanosensitive ion channel porin domain ISU65_04945 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU65_04950 PF10689 Protein of unknown function (DUF2496) ISU65_04960 PF04304 Protein of unknown function (DUF454) ISU65_04965 PF00156 Phosphoribosyl transferase domain ISU65_04970 PF12169 DNA polymerase III subunits gamma and tau domain III ISU65_04970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU65_04970 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU65_04975 PF02575 YbaB/EbfC DNA-binding family ISU65_04980 PF02132 RecR protein ISU65_04980 PF13662 Toprim domain ISU65_04985 PF00183 Hsp90 protein ISU65_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_04990 PF05191 Adenylate kinase, active site lid ISU65_04995 PF00762 Ferrochelatase ISU65_05000 PF00970 Oxidoreductase FAD-binding domain ISU65_05000 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU65_05000 PF00175 Oxidoreductase NAD-binding domain ISU65_05005 PF00483 Nucleotidyl transferase ISU65_05010 PF16363 GDP-mannose 4,6 dehydratase ISU65_05015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU65_05020 PF01370 NAD dependent epimerase/dehydratase family ISU65_05050 PF13439 Glycosyltransferase Family 4 ISU65_05050 PF00534 Glycosyl transferases group 1 ISU65_05060 PF01370 NAD dependent epimerase/dehydratase family ISU65_05065 PF01050 Mannose-6-phosphate isomerase ISU65_05065 PF00483 Nucleotidyl transferase ISU65_05070 PF00535 Glycosyl transferase family 2 ISU65_05075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU65_05075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU65_05075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU65_05075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU65_05080 PF02706 Chain length determinant protein ISU65_05085 PF00294 pfkB family carbohydrate kinase ISU65_05090 PF00999 Sodium/hydrogen exchanger family ISU65_05090 PF02254 TrkA-N domain ISU65_05095 PF07690 Major Facilitator Superfamily ISU65_05110 PF04073 Aminoacyl-tRNA editing domain ISU65_05115 PF01963 TraB family ISU65_05120 PF00403 Heavy-metal-associated domain ISU65_05125 PF13411 MerR HTH family regulatory protein ISU65_05130 PF01957 NfeD-like C-terminal, partner-binding ISU65_05135 PF01145 SPFH domain / Band 7 family ISU65_05135 PF16200 C-terminal region of band_7 ISU65_05140 PF00085 Thioredoxin ISU65_05145 PF00106 short chain dehydrogenase ISU65_05150 PF13472 GDSL-like Lipase/Acylhydrolase family ISU65_05155 PF00005 ABC transporter ISU65_05165 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU65_05165 PF02222 ATP-grasp domain ISU65_05170 PF00731 AIR carboxylase ISU65_05175 PF00149 Calcineurin-like phosphoesterase ISU65_05180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU65_05185 PF01406 tRNA synthetases class I (C) catalytic domain ISU65_05185 PF09190 DALR domain ISU65_05190 PF01797 Transposase IS200 like ISU65_05200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU65_05200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU65_05230 PF00589 Phage integrase family ISU65_05240 PF01066 CDP-alcohol phosphatidyltransferase ISU65_05250 PF01553 Acyltransferase ISU65_05255 PF12147 Putative methyltransferase ISU65_05255 PF12146 Serine aminopeptidase, S33 ISU65_05260 PF00782 Dual specificity phosphatase, catalytic domain ISU65_05275 PF01695 IstB-like ATP binding protein ISU65_05280 PF00665 Integrase core domain ISU65_05280 PF02796 Helix-turn-helix domain of resolvase ISU65_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_05285 PF03466 LysR substrate binding domain ISU65_05290 PF00248 Aldo/keto reductase family ISU65_05295 PF00248 Aldo/keto reductase family ISU65_05305 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU65_05305 PF14310 Fibronectin type III-like domain ISU65_05305 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU65_05320 PF00872 Transposase, Mutator family ISU65_05340 PF13018 Extended Signal Peptide of Type V secretion system ISU65_05340 PF03797 Autotransporter beta-domain ISU65_05340 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU65_05340 PF03212 Pertactin ISU65_05355 PF05638 Type VI secretion system effector, Hcp ISU65_05375 PF13693 Winged helix-turn-helix DNA-binding ISU65_05380 PF00905 Penicillin binding protein transpeptidase domain ISU65_05380 PF00912 Transglycosylase ISU65_05380 PF06832 Penicillin-Binding Protein C-terminus Family ISU65_05385 PF01797 Transposase IS200 like ISU65_05390 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU65_05390 PF17962 Bacterial macroglobulin domain 6 ISU65_05390 PF01835 MG2 domain ISU65_05390 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU65_05390 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU65_05390 PF07703 Alpha-2-macroglobulin bait region domain ISU65_05390 PF00207 Alpha-2-macroglobulin family ISU65_05405 PF00171 Aldehyde dehydrogenase family ISU65_05410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU65_05410 PF00205 Thiamine pyrophosphate enzyme, central domain ISU65_05410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU65_05420 PF13407 Periplasmic binding protein domain ISU65_05425 PF00005 ABC transporter ISU65_05430 PF02653 Branched-chain amino acid transport system / permease component ISU65_05435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU65_05435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU65_05440 PF00294 pfkB family carbohydrate kinase ISU65_05445 PF01261 Xylose isomerase-like TIM barrel ISU65_05450 PF04962 KduI/IolB family ISU65_05460 PF00664 ABC transporter transmembrane region ISU65_05460 PF00005 ABC transporter ISU65_05485 PF00196 Bacterial regulatory proteins, luxR family ISU65_05490 PF00313 'Cold-shock' DNA-binding domain ISU65_05495 PF00313 'Cold-shock' DNA-binding domain ISU65_05500 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU65_05505 PF02416 mttA/Hcf106 family ISU65_05510 PF04055 Radical SAM superfamily ISU65_05510 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU65_05515 PF03099 Biotin/lipoate A/B protein ligase family ISU65_05520 PF04359 Protein of unknown function (DUF493) ISU65_05525 PF00768 D-alanyl-D-alanine carboxypeptidase ISU65_05525 PF07943 Penicillin-binding protein 5, C-terminal domain ISU65_05530 PF03330 Lytic transglycolase ISU65_05530 PF05036 Sporulation related domain ISU65_05535 PF01098 Cell cycle protein ISU65_05540 PF03717 Penicillin-binding Protein dimerisation domain ISU65_05540 PF00905 Penicillin binding protein transpeptidase domain ISU65_05545 PF02590 Predicted SPOUT methyltransferase ISU65_05555 PF01467 Cytidylyltransferase-like ISU65_05560 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU65_05560 PF06144 DNA polymerase III, delta subunit ISU65_05565 PF04390 Lipopolysaccharide-assembly ISU65_05570 PF00133 tRNA synthetases class I (I, L, M and V) ISU65_05570 PF08264 Anticodon-binding domain of tRNA ISU65_05570 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU65_05575 PF07295 Zinc-ribbon containing domain ISU65_05580 PF00005 ABC transporter ISU65_05585 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_05590 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_05595 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_05600 PF00795 Carbon-nitrogen hydrolase ISU65_05605 PF00571 CBS domain ISU65_05605 PF03471 Transporter associated domain ISU65_05610 PF02130 Uncharacterized protein family UPF0054 ISU65_05615 PF02562 PhoH-like protein ISU65_05620 PF00919 Uncharacterized protein family UPF0004 ISU65_05620 PF01938 TRAM domain ISU65_05620 PF04055 Radical SAM superfamily ISU65_05625 PF01494 FAD binding domain ISU65_05660 PF13537 Glutamine amidotransferase domain ISU65_05660 PF00733 Asparagine synthase ISU65_05665 PF13344 Haloacid dehalogenase-like hydrolase ISU65_05670 PF01047 MarR family ISU65_05670 PF00480 ROK family ISU65_05675 PF01979 Amidohydrolase family ISU65_05680 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU65_05685 PF02378 Phosphotransferase system, EIIC ISU65_05685 PF00367 phosphotransferase system, EIIB ISU65_05685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU65_05690 PF01797 Transposase IS200 like ISU65_05695 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU65_05695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU65_05700 PF03573 outer membrane porin, OprD family ISU65_05710 PF01475 Ferric uptake regulator family ISU65_05715 PF00258 Flavodoxin ISU65_05720 PF01402 Ribbon-helix-helix protein, copG family ISU65_05725 PF12697 Alpha/beta hydrolase family ISU65_05735 PF00589 Phage integrase family ISU65_05735 PF13356 Arm DNA-binding domain ISU65_05750 PF01695 IstB-like ATP binding protein ISU65_05755 PF00665 Integrase core domain ISU65_05755 PF02796 Helix-turn-helix domain of resolvase ISU65_05770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU65_05775 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_05780 PF00005 ABC transporter ISU65_05780 PF00571 CBS domain ISU65_05785 PF00268 Ribonucleotide reductase, small chain ISU65_05790 PF02867 Ribonucleotide reductase, barrel domain ISU65_05790 PF08343 Ribonucleotide reductase N-terminal ISU65_05790 PF00317 Ribonucleotide reductase, all-alpha domain ISU65_05805 PF06392 Acid shock protein repeat ISU65_05810 PF09400 Protein of unknown function (DUF2002) ISU65_05815 PF06711 Protein of unknown function (DUF1198) ISU65_05825 PF00313 'Cold-shock' DNA-binding domain ISU65_05830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_05835 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_05840 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU65_05840 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_05845 PF00005 ABC transporter ISU65_05850 PF00005 ABC transporter ISU65_05855 PF00547 Urease, gamma subunit ISU65_05860 PF00699 Urease beta subunit ISU65_05865 PF00449 Urease alpha-subunit, N-terminal domain ISU65_05865 PF01979 Amidohydrolase family ISU65_05870 PF05194 UreE urease accessory protein, C-terminal domain ISU65_05870 PF02814 UreE urease accessory protein, N-terminal domain ISU65_05875 PF01730 UreF ISU65_05880 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU65_05885 PF01774 UreD urease accessory protein ISU65_05890 PF03253 Urea transporter ISU65_05895 PF03824 High-affinity nickel-transport protein ISU65_05900 PF06411 HdeA/HdeB family ISU65_05905 PF02254 TrkA-N domain ISU65_05905 PF07885 Ion channel ISU65_05910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU65_05915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU65_05925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU65_05930 PF02378 Phosphotransferase system, EIIC ISU65_05935 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU65_05940 PF12833 Helix-turn-helix domain ISU65_05940 PF07883 Cupin domain ISU65_05945 PF04794 YdjC-like protein ISU65_05955 PF03925 SeqA protein C-terminal domain ISU65_05955 PF17206 SeqA protein N-terminal domain ISU65_05960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU65_05960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU65_05960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU65_05960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU65_05975 PF00486 Transcriptional regulatory protein, C terminal ISU65_05975 PF00072 Response regulator receiver domain ISU65_05980 PF13492 GAF domain ISU65_05980 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU65_05980 PF13493 Domain of unknown function (DUF4118) ISU65_05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_05980 PF00512 His Kinase A (phospho-acceptor) domain ISU65_05985 PF02669 K+-transporting ATPase, c chain ISU65_05995 PF03814 Potassium-transporting ATPase A subunit ISU65_06010 PF10725 Protein of unknown function (DUF2517) ISU65_06015 PF08349 Protein of unknown function (DUF1722) ISU65_06020 PF00875 DNA photolyase ISU65_06020 PF03441 FAD binding domain of DNA photolyase ISU65_06025 PF02112 cAMP phosphodiesterases class-II ISU65_06030 PF01784 NIF3 (NGG1p interacting factor 3) ISU65_06045 PF02626 Carboxyltransferase domain, subdomain A and B ISU65_06050 PF03746 LamB/YcsF family ISU65_06065 PF01470 Pyroglutamyl peptidase ISU65_06070 PF03167 Uracil DNA glycosylase superfamily ISU65_06075 PF01228 Glycine radical ISU65_06085 PF12796 Ankyrin repeats (3 copies) ISU65_06090 PF00270 DEAD/DEAH box helicase ISU65_06090 PF00271 Helicase conserved C-terminal domain ISU65_06095 PF05175 Methyltransferase small domain ISU65_06100 PF00890 FAD binding domain ISU65_06100 PF02910 Fumarate reductase flavoprotein C-term ISU65_06105 PF04542 Sigma-70 region 2 ISU65_06105 PF08281 Sigma-70, region 4 ISU65_06110 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU65_06110 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU65_06115 PF03888 MucB/RseB N-terminal domain ISU65_06115 PF17188 MucB/RseB C-terminal domain ISU65_06130 PF03144 Elongation factor Tu domain 2 ISU65_06130 PF06421 GTP-binding protein LepA C-terminus ISU65_06130 PF00009 Elongation factor Tu GTP binding domain ISU65_06130 PF00679 Elongation factor G C-terminus ISU65_06135 PF10502 Signal peptidase, peptidase S26 ISU65_06140 PF00035 Double-stranded RNA binding motif ISU65_06140 PF14622 Ribonuclease-III-like ISU65_06145 PF01926 50S ribosome-binding GTPase ISU65_06145 PF07650 KH domain ISU65_06150 PF11967 Recombination protein O N terminal ISU65_06150 PF02565 Recombination protein O C terminal ISU65_06155 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU65_06160 PF01648 4'-phosphopantetheinyl transferase superfamily ISU65_06165 PF01797 Transposase IS200 like ISU65_06170 PF12838 4Fe-4S dicluster domain ISU65_06175 PF01418 Helix-turn-helix domain, rpiR family ISU65_06175 PF01380 SIS domain ISU65_06180 PF01380 SIS domain ISU65_06190 PF14437 MafB19-like deaminase ISU65_06195 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_06195 PF01464 Transglycosylase SLT domain ISU65_06200 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU65_06200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU65_06200 PF02769 AIR synthase related protein, C-terminal domain ISU65_06225 PF01797 Transposase IS200 like ISU65_06230 PF00512 His Kinase A (phospho-acceptor) domain ISU65_06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_06235 PF13942 YfhG lipoprotein ISU65_06240 PF00158 Sigma-54 interaction domain ISU65_06240 PF00072 Response regulator receiver domain ISU65_06245 PF02540 NAD synthase ISU65_06245 PF00795 Carbon-nitrogen hydrolase ISU65_06250 PF00543 Nitrogen regulatory protein P-II ISU65_06260 PF00665 Integrase core domain ISU65_06260 PF02796 Helix-turn-helix domain of resolvase ISU65_06265 PF01695 IstB-like ATP binding protein ISU65_06275 PF00970 Oxidoreductase FAD-binding domain ISU65_06275 PF00042 Globin ISU65_06275 PF00175 Oxidoreductase NAD-binding domain ISU65_06280 PF00464 Serine hydroxymethyltransferase ISU65_06290 PF13505 Outer membrane protein beta-barrel domain ISU65_06295 PF12832 MFS_1 like family ISU65_06300 PF00874 PRD domain ISU65_06305 PF06226 Protein of unknown function (DUF1007) ISU65_06310 PF03824 High-affinity nickel-transport protein ISU65_06315 PF00459 Inositol monophosphatase family ISU65_06320 PF00588 SpoU rRNA Methylase family ISU65_06325 PF02082 Transcriptional regulator ISU65_06330 PF00266 Aminotransferase class-V ISU65_06335 PF01592 NifU-like N terminal domain ISU65_06340 PF01521 Iron-sulphur cluster biosynthesis ISU65_06345 PF00226 DnaJ domain ISU65_06345 PF07743 HSCB C-terminal oligomerisation domain ISU65_06350 PF00012 Hsp70 protein ISU65_06355 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU65_06360 PF04384 Iron-sulphur cluster assembly ISU65_06365 PF00883 Cytosol aminopeptidase family, catalytic domain ISU65_06365 PF12404 Peptidase ISU65_06370 PF07179 SseB protein N-terminal domain ISU65_06370 PF14581 SseB protein C-terminal domain ISU65_06385 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU65_06385 PF03212 Pertactin ISU65_06385 PF03797 Autotransporter beta-domain ISU65_06390 PF03212 Pertactin ISU65_06390 PF03797 Autotransporter beta-domain ISU65_06390 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU65_06400 PF00334 Nucleoside diphosphate kinase ISU65_06405 PF04055 Radical SAM superfamily ISU65_06415 PF13464 Domain of unknown function (DUF4115) ISU65_06420 PF04551 GcpE protein ISU65_06425 PF03129 Anticodon binding domain ISU65_06425 PF13393 Histidyl-tRNA synthetase ISU65_06430 PF09976 Tetratricopeptide repeat-like domain ISU65_06435 PF13360 PQQ-like domain ISU65_06440 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU65_06440 PF01926 50S ribosome-binding GTPase ISU65_06450 PF07191 zinc-ribbons ISU65_06455 PF02601 Exonuclease VII, large subunit ISU65_06455 PF13742 OB-fold nucleic acid binding domain ISU65_06460 PF00571 CBS domain ISU65_06460 PF00478 IMP dehydrogenase / GMP reductase domain ISU65_06465 PF02540 NAD synthase ISU65_06465 PF00958 GMP synthase C terminal domain ISU65_06465 PF00117 Glutamine amidotransferase class-I ISU65_06470 PF01797 Transposase IS200 like ISU65_06475 PF05638 Type VI secretion system effector, Hcp ISU65_06505 PF00872 Transposase, Mutator family ISU65_06520 PF08543 Phosphomethylpyrimidine kinase ISU65_06540 PF00781 Diacylglycerol kinase catalytic domain ISU65_06545 PF01136 Peptidase family U32 ISU65_06545 PF16325 Peptidase family U32 C-terminal domain ISU65_06550 PF07411 Domain of unknown function (DUF1508) ISU65_06555 PF00072 Response regulator receiver domain ISU65_06555 PF00486 Transcriptional regulatory protein, C terminal ISU65_06565 PF07690 Major Facilitator Superfamily ISU65_06570 PF00873 AcrB/AcrD/AcrF family ISU65_06575 PF00873 AcrB/AcrD/AcrF family ISU65_06580 PF13533 Biotin-lipoyl like ISU65_06590 PF00392 Bacterial regulatory proteins, gntR family ISU65_06590 PF00155 Aminotransferase class I and II ISU65_06595 PF00202 Aminotransferase class-III ISU65_06605 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_06610 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_06615 PF00012 Hsp70 protein ISU65_06620 PF03448 MgtE intracellular N domain ISU65_06620 PF01769 Divalent cation transporter ISU65_06620 PF00571 CBS domain ISU65_06630 PF02541 Ppx/GppA phosphatase family ISU65_06635 PF17941 Polyphosphate kinase C-terminal domain 1 ISU65_06635 PF02503 Polyphosphate kinase middle domain ISU65_06635 PF13089 Polyphosphate kinase N-terminal domain ISU65_06635 PF13090 Polyphosphate kinase C-terminal domain 2 ISU65_06640 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_06645 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_06650 PF00005 ABC transporter ISU65_06660 PF13302 Acetyltransferase (GNAT) domain ISU65_06665 PF00551 Formyl transferase ISU65_06670 PF00586 AIR synthase related protein, N-terminal domain ISU65_06670 PF02769 AIR synthase related protein, C-terminal domain ISU65_06680 PF01797 Transposase IS200 like ISU65_06685 PF00308 Bacterial dnaA protein ISU65_06690 PF03960 ArsC family ISU65_06695 PF01435 Peptidase family M48 ISU65_06695 PF07720 Tetratricopeptide repeat ISU65_06700 PF01594 AI-2E family transporter ISU65_06710 PF00578 AhpC/TSA family ISU65_06715 PF01842 ACT domain ISU65_06720 PF00701 Dihydrodipicolinate synthetase family ISU65_06725 PF06804 NlpB/DapX lipoprotein ISU65_06730 PF01797 Transposase IS200 like ISU65_06735 PF01259 SAICAR synthetase ISU65_06740 PF04228 Putative neutral zinc metallopeptidase ISU65_06745 PF04284 Protein of unknown function (DUF441) ISU65_06750 PF17176 tRNA-binding domain ISU65_06750 PF08351 Domain of unknown function (DUF1726) ISU65_06750 PF13718 GNAT acetyltransferase 2 ISU65_06750 PF05127 Helicase ISU65_06755 PF13980 Uncharacterised protein family (UPF0370) ISU65_06760 PF02557 D-alanyl-D-alanine carboxypeptidase ISU65_06765 PF07687 Peptidase dimerisation domain ISU65_06765 PF01546 Peptidase family M20/M25/M40 ISU65_06770 PF03960 ArsC family ISU65_06785 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_06790 PF00005 ABC transporter ISU65_06790 PF08402 TOBE domain ISU65_06800 PF00884 Sulfatase ISU65_06805 PF04055 Radical SAM superfamily ISU65_06805 PF13186 Iron-sulfur cluster-binding domain ISU65_06810 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU65_06820 PF00873 AcrB/AcrD/AcrF family ISU65_06830 PF00196 Bacterial regulatory proteins, luxR family ISU65_06830 PF00072 Response regulator receiver domain ISU65_06835 PF12800 4Fe-4S binding domain ISU65_06835 PF00037 4Fe-4S binding domain ISU65_06835 PF13187 4Fe-4S dicluster domain ISU65_06840 PF03927 NapD protein ISU65_06850 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU65_06855 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU65_06860 PF00293 NUDIX domain ISU65_06865 PF00390 Malic enzyme, N-terminal domain ISU65_06865 PF03949 Malic enzyme, NAD binding domain ISU65_06865 PF01515 Phosphate acetyl/butaryl transferase ISU65_06870 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU65_06875 PF01218 Coproporphyrinogen III oxidase ISU65_06880 PF00583 Acetyltransferase (GNAT) family ISU65_06890 PF03212 Pertactin ISU65_06890 PF13018 Extended Signal Peptide of Type V secretion system ISU65_06890 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU65_06890 PF03797 Autotransporter beta-domain ISU65_06895 PF04076 Bacterial OB fold (BOF) protein ISU65_06900 PF06572 Protein of unknown function (DUF1131) ISU65_06905 PF04261 Dyp-type peroxidase family ISU65_06910 PF00701 Dihydrodipicolinate synthetase family ISU65_06915 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU65_06920 PF12468 Type III secretion system leucine rich repeat protein ISU65_06925 PF00480 ROK family ISU65_06930 PF04074 YhcH/YjgK/YiaL ISU65_06935 PF01418 Helix-turn-helix domain, rpiR family ISU65_06935 PF01380 SIS domain ISU65_06940 PF07690 Major Facilitator Superfamily ISU65_06950 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_06955 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_06960 PF00005 ABC transporter ISU65_06965 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_06975 PF00486 Transcriptional regulatory protein, C terminal ISU65_06975 PF00072 Response regulator receiver domain ISU65_06980 PF00512 His Kinase A (phospho-acceptor) domain ISU65_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_06980 PF00672 HAMP domain ISU65_06990 PF00155 Aminotransferase class I and II ISU65_07000 PF00557 Metallopeptidase family M24 ISU65_07010 PF00474 Sodium:solute symporter family ISU65_07015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_07015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU65_07020 PF12704 MacB-like periplasmic core domain ISU65_07020 PF00005 ABC transporter ISU65_07020 PF02687 FtsX-like permease family ISU65_07025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_07030 PF00486 Transcriptional regulatory protein, C terminal ISU65_07030 PF00072 Response regulator receiver domain ISU65_07035 PF00672 HAMP domain ISU65_07035 PF00512 His Kinase A (phospho-acceptor) domain ISU65_07035 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU65_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_07040 PF01797 Transposase IS200 like ISU65_07045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU65_07050 PF00391 PEP-utilising enzyme, mobile domain ISU65_07050 PF05524 PEP-utilising enzyme, N-terminal ISU65_07050 PF02896 PEP-utilising enzyme, TIM barrel domain ISU65_07055 PF00381 PTS HPr component phosphorylation site ISU65_07060 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_07070 PF04354 ZipA, C-terminal FtsZ-binding domain ISU65_07075 PF12826 Helix-hairpin-helix motif ISU65_07075 PF00533 BRCA1 C Terminus (BRCT) domain ISU65_07075 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU65_07075 PF01653 NAD-dependent DNA ligase adenylation domain ISU65_07075 PF03120 NAD-dependent DNA ligase OB-fold domain ISU65_07080 PF12843 Putative quorum-sensing-regulated virulence factor ISU65_07105 PF01797 Transposase IS200 like ISU65_07110 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU65_07145 PF07670 Nucleoside recognition ISU65_07145 PF01773 Na+ dependent nucleoside transporter N-terminus ISU65_07145 PF07662 Na+ dependent nucleoside transporter C-terminus ISU65_07150 PF01566 Natural resistance-associated macrophage protein ISU65_07160 PF00248 Aldo/keto reductase family ISU65_07165 PF03466 LysR substrate binding domain ISU65_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_07175 PF02685 Glucokinase ISU65_07180 PF07350 Protein of unknown function (DUF1479) ISU65_07185 PF00155 Aminotransferase class I and II ISU65_07190 PF01292 Prokaryotic cytochrome b561 ISU65_07200 PF03783 Curli production assembly/transport component CsgG ISU65_07210 PF05643 Putative bacterial lipoprotein (DUF799) ISU65_07220 PF02613 Nitrate reductase delta subunit ISU65_07225 PF04976 DMSO reductase anchor subunit (DmsC) ISU65_07230 PF13247 4Fe-4S dicluster domain ISU65_07230 PF12800 4Fe-4S binding domain ISU65_07235 PF00384 Molybdopterin oxidoreductase ISU65_07235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU65_07235 PF01568 Molydopterin dinucleotide binding domain ISU65_07245 PF05638 Type VI secretion system effector, Hcp ISU65_07255 PF00005 ABC transporter ISU65_07260 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_07270 PF13406 Transglycosylase SLT domain ISU65_07315 PF05947 Type VI secretion system, TssF ISU65_07320 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_07320 PF07724 AAA domain (Cdc48 subfamily) ISU65_07320 PF17871 AAA lid domain ISU65_07320 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_07325 PF16970 Type-1 fimbrial protein, A ISU65_07330 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_07330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_07335 PF00577 Outer membrane usher protein ISU65_07335 PF13954 PapC N-terminal domain ISU65_07335 PF13953 PapC C-terminal domain ISU65_07340 PF00872 Transposase, Mutator family ISU65_07345 PF13953 PapC C-terminal domain ISU65_07345 PF00577 Outer membrane usher protein ISU65_07345 PF13954 PapC N-terminal domain ISU65_07355 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU65_07360 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU65_07375 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU65_07385 PF00665 Integrase core domain ISU65_07385 PF02796 Helix-turn-helix domain of resolvase ISU65_07390 PF01695 IstB-like ATP binding protein ISU65_07400 PF05971 RNA methyltransferase ISU65_07405 PF07338 Protein of unknown function (DUF1471) ISU65_07410 PF02885 Glycosyl transferase family, helical bundle domain ISU65_07415 PF00501 AMP-binding enzyme ISU65_07415 PF13193 AMP-binding enzyme C-terminal domain ISU65_07420 PF13378 Enolase C-terminal domain-like ISU65_07425 PF00378 Enoyl-CoA hydratase/isomerase ISU65_07430 PF12697 Alpha/beta hydrolase family ISU65_07435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU65_07435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU65_07435 PF16582 Middle domain of thiamine pyrophosphate ISU65_07440 PF00425 chorismate binding enzyme ISU65_07450 PF05957 Bacterial protein of unknown function (DUF883) ISU65_07455 PF00920 Dehydratase family ISU65_07460 PF03928 Haem-degrading ISU65_07465 PF07690 Major Facilitator Superfamily ISU65_07470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU65_07470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU65_07475 PF00356 Bacterial regulatory proteins, lacI family ISU65_07480 PF02638 Glycosyl hydrolase-like 10 ISU65_07495 PF01202 Shikimate kinase ISU65_07500 PF00106 short chain dehydrogenase ISU65_07515 PF00361 Proton-conducting membrane transporter ISU65_07520 PF00361 Proton-conducting membrane transporter ISU65_07525 PF00361 Proton-conducting membrane transporter ISU65_07525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU65_07530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU65_07535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU65_07540 PF12838 4Fe-4S dicluster domain ISU65_07545 PF00146 NADH dehydrogenase ISU65_07550 PF01568 Molydopterin dinucleotide binding domain ISU65_07550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU65_07550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU65_07550 PF00384 Molybdopterin oxidoreductase ISU65_07555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU65_07555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU65_07555 PF10531 SLBB domain ISU65_07565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU65_07565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU65_07570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU65_07575 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU65_07580 PF03466 LysR substrate binding domain ISU65_07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_07585 PF00155 Aminotransferase class I and II ISU65_07600 PF03600 Citrate transporter ISU65_07600 PF02080 TrkA-C domain ISU65_07605 PF13419 Haloacid dehalogenase-like hydrolase ISU65_07610 PF03887 YfbU domain ISU65_07615 PF04217 Protein of unknown function, DUF412 ISU65_07620 PF00871 Acetokinase family ISU65_07625 PF07085 DRTGG domain ISU65_07625 PF01515 Phosphate acetyl/butaryl transferase ISU65_07630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU65_07630 PF00356 Bacterial regulatory proteins, lacI family ISU65_07635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU65_07645 PF00872 Transposase, Mutator family ISU65_07650 PF03611 PTS system sugar-specific permease component ISU65_07655 PF00293 NUDIX domain ISU65_07660 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU65_07670 PF08338 Domain of unknown function (DUF1731) ISU65_07670 PF01370 NAD dependent epimerase/dehydratase family ISU65_07675 PF00005 ABC transporter ISU65_07680 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_07685 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_07690 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_07695 PF02441 Flavoprotein ISU65_07700 PF00156 Phosphoribosyl transferase domain ISU65_07705 PF02674 Colicin V production protein ISU65_07710 PF05036 Sporulation related domain ISU65_07715 PF08245 Mur ligase middle domain ISU65_07715 PF02875 Mur ligase family, glutamate ligase domain ISU65_07720 PF17848 Acetyl-coA carboxylase zinc finger domain ISU65_07720 PF01039 Carboxyl transferase domain ISU65_07725 PF09335 SNARE associated Golgi protein ISU65_07730 PF01416 tRNA pseudouridine synthase ISU65_07735 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU65_07735 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU65_07740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU65_07740 PF11890 Domain of unknown function (DUF3410) ISU65_07740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU65_07750 PF00892 EamA-like transporter family ISU65_07760 PF00419 Fimbrial protein ISU65_07765 PF01177 Asp/Glu/Hydantoin racemase ISU65_07770 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU65_07770 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU65_07775 PF01266 FAD dependent oxidoreductase ISU65_07775 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU65_07780 PF08891 YfcL protein ISU65_07785 PF04315 Elongation factor P hydroxylase ISU65_07790 PF01925 Sulfite exporter TauE/SafE ISU65_07795 PF03411 Penicillin-insensitive murein endopeptidase ISU65_07800 PF01264 Chorismate synthase ISU65_07805 PF05175 Methyltransferase small domain ISU65_07810 PF01713 Smr domain ISU65_07815 PF00300 Histidine phosphatase superfamily (branch 1) ISU65_07820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU65_07820 PF00378 Enoyl-CoA hydratase/isomerase ISU65_07820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU65_07825 PF00108 Thiolase, N-terminal domain ISU65_07825 PF02803 Thiolase, C-terminal domain ISU65_07830 PF04175 Protein of unknown function (DUF406) ISU65_07835 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU65_07840 PF04333 MlaA lipoprotein ISU65_07845 PF03918 Cytochrome C biogenesis protein ISU65_07850 PF03918 Cytochrome C biogenesis protein ISU65_07855 PF08534 Redoxin ISU65_07860 PF01578 Cytochrome C assembly protein ISU65_07860 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU65_07865 PF03100 CcmE ISU65_07870 PF04995 Heme exporter protein D (CcmD) ISU65_07875 PF01578 Cytochrome C assembly protein ISU65_07880 PF03379 CcmB protein ISU65_07885 PF00005 ABC transporter ISU65_07900 PF04011 LemA family ISU65_07910 PF08274 PhnA Zinc-Ribbon ISU65_07910 PF03831 PhnA domain ISU65_07925 PF07024 ImpE protein ISU65_07940 PF04717 Type VI secretion system, phage-baseplate injector ISU65_07940 PF06715 Gp5 C-terminal repeat (3 copies) ISU65_07945 PF06761 Intracellular multiplication and human macrophage-killing ISU65_07945 PF06744 Type VI secretion protein IcmF C-terminal ISU65_07945 PF14331 ImcF-related N-terminal domain ISU65_07955 PF01695 IstB-like ATP binding protein ISU65_07960 PF00665 Integrase core domain ISU65_07960 PF02796 Helix-turn-helix domain of resolvase ISU65_07965 PF13426 PAS domain ISU65_07965 PF08447 PAS fold ISU65_07965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU65_07970 PF00005 ABC transporter ISU65_07975 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_07980 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_07990 PF00210 Ferritin-like domain ISU65_07995 PF13649 Methyltransferase domain ISU65_08005 PF00892 EamA-like transporter family ISU65_08010 PF13505 Outer membrane protein beta-barrel domain ISU65_08030 PF00107 Zinc-binding dehydrogenase ISU65_08030 PF08240 Alcohol dehydrogenase GroES-like domain ISU65_08035 PF13407 Periplasmic binding protein domain ISU65_08040 PF00005 ABC transporter ISU65_08045 PF02653 Branched-chain amino acid transport system / permease component ISU65_08050 PF00356 Bacterial regulatory proteins, lacI family ISU65_08055 PF03466 LysR substrate binding domain ISU65_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_08060 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU65_08070 PF02028 BCCT, betaine/carnitine/choline family transporter ISU65_08080 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU65_08080 PF00970 Oxidoreductase FAD-binding domain ISU65_08080 PF00175 Oxidoreductase NAD-binding domain ISU65_08085 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU65_08085 PF17287 POTRA domain ISU65_08085 PF08479 POTRA domain, ShlB-type ISU65_08130 PF04829 Pre-toxin domain with VENN motif ISU65_08130 PF15526 Novel toxin 21 ISU65_08130 PF05594 Haemagluttinin repeat ISU65_08130 PF13332 Hemagglutinin repeat ISU65_08130 PF05860 haemagglutination activity domain ISU65_08140 PF00005 ABC transporter ISU65_08140 PF17912 MalK OB fold domain ISU65_08145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU65_08145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU65_08145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU65_08145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU65_08150 PF00356 Bacterial regulatory proteins, lacI family ISU65_08160 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_08165 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_08170 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU65_08195 PF00924 Mechanosensitive ion channel ISU65_08200 PF01867 CRISPR associated protein Cas1 ISU65_08210 PF09611 CRISPR-associated protein (Cas_Csy1) ISU65_08215 PF09614 CRISPR-associated protein (Cas_Csy2) ISU65_08220 PF09615 CRISPR-associated protein (Cas_Csy3) ISU65_08225 PF09618 CRISPR-associated protein (Cas_Csy4) ISU65_08230 PF00248 Aldo/keto reductase family ISU65_08240 PF00083 Sugar (and other) transporter ISU65_08250 PF03466 LysR substrate binding domain ISU65_08250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_08255 PF00196 Bacterial regulatory proteins, luxR family ISU65_08255 PF03472 Autoinducer binding domain ISU65_08260 PF00765 Autoinducer synthase ISU65_08275 PF17773 UPF0176 acylphosphatase like domain ISU65_08275 PF12368 Rhodanase C-terminal ISU65_08275 PF00581 Rhodanese-like domain ISU65_08280 PF01594 AI-2E family transporter ISU65_08290 PF00196 Bacterial regulatory proteins, luxR family ISU65_08295 PF01266 FAD dependent oxidoreductase ISU65_08300 PF00872 Transposase, Mutator family ISU65_08310 PF03992 Antibiotic biosynthesis monooxygenase ISU65_08315 PF01979 Amidohydrolase family ISU65_08320 PF06183 DinI-like family ISU65_08325 PF13991 BssS protein family ISU65_08330 PF00872 Transposase, Mutator family ISU65_08335 PF12111 Polyribonucleotide phosphorylase C terminal ISU65_08335 PF10150 Ribonuclease E/G family ISU65_08335 PF00575 S1 RNA binding domain ISU65_08340 PF01479 S4 domain ISU65_08340 PF00849 RNA pseudouridylate synthase ISU65_08345 PF02545 Maf-like protein ISU65_08350 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU65_08355 PF01783 Ribosomal L32p protein family ISU65_08360 PF02504 Fatty acid synthesis protein ISU65_08365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU65_08365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU65_08370 PF00698 Acyl transferase domain ISU65_08380 PF00550 Phosphopantetheine attachment site ISU65_08385 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU65_08385 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU65_08390 PF01797 Transposase IS200 like ISU65_08395 PF01063 Amino-transferase class IV ISU65_08400 PF02618 YceG-like family ISU65_08405 PF02223 Thymidylate kinase ISU65_08410 PF09115 DNA polymerase III, delta subunit, C terminal ISU65_08415 PF01026 TatD related DNase ISU65_08420 PF02378 Phosphotransferase system, EIIC ISU65_08420 PF00367 phosphotransferase system, EIIB ISU65_08425 PF01797 Transposase IS200 like ISU65_08430 PF01695 IstB-like ATP binding protein ISU65_08435 PF00665 Integrase core domain ISU65_08435 PF02796 Helix-turn-helix domain of resolvase ISU65_08445 PF08501 Shikimate dehydrogenase substrate binding domain ISU65_08450 PF01230 HIT domain ISU65_08455 PF07233 Protein of unknown function (DUF1425) ISU65_08460 PF13036 Peptidoglycan-synthase activator LpoB ISU65_08460 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU65_08465 PF01636 Phosphotransferase enzyme family ISU65_08470 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU65_08475 PF05728 Uncharacterised protein family (UPF0227) ISU65_08480 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_08495 PF00872 Transposase, Mutator family ISU65_08500 PF05433 Glycine zipper 2TM domain ISU65_08505 PF02559 CarD-like/TRCF domain ISU65_08505 PF03461 TRCF domain ISU65_08505 PF00271 Helicase conserved C-terminal domain ISU65_08505 PF00270 DEAD/DEAH box helicase ISU65_08505 PF17757 UvrB interaction domain ISU65_08510 PF02687 FtsX-like permease family ISU65_08510 PF12704 MacB-like periplasmic core domain ISU65_08515 PF00005 ABC transporter ISU65_08520 PF02687 FtsX-like permease family ISU65_08520 PF12704 MacB-like periplasmic core domain ISU65_08525 PF00480 ROK family ISU65_08530 PF00480 ROK family ISU65_08535 PF02146 Sir2 family ISU65_08540 PF07687 Peptidase dimerisation domain ISU65_08540 PF01546 Peptidase family M20/M25/M40 ISU65_08545 PF08007 Cupin superfamily protein ISU65_08550 PF08918 PhoQ Sensor ISU65_08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_08555 PF00486 Transcriptional regulatory protein, C terminal ISU65_08555 PF00072 Response regulator receiver domain ISU65_08565 PF08328 Adenylosuccinate lyase C-terminal ISU65_08565 PF00206 Lyase ISU65_08570 PF04356 Protein of unknown function (DUF489) ISU65_08580 PF00293 NUDIX domain ISU65_08585 PF00849 RNA pseudouridylate synthase ISU65_08590 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU65_08595 PF00356 Bacterial regulatory proteins, lacI family ISU65_08595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU65_08605 PF08447 PAS fold ISU65_08605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU65_08610 PF05368 NmrA-like family ISU65_08615 PF01638 HxlR-like helix-turn-helix ISU65_08625 PF00328 Histidine phosphatase superfamily (branch 2) ISU65_08630 PF14001 YdfZ protein ISU65_08640 PF01037 Lrp/AsnC ligand binding domain ISU65_08640 PF13404 AsnC-type helix-turn-helix domain ISU65_08650 PF10777 Inner membrane protein YlaC ISU65_08655 PF00107 Zinc-binding dehydrogenase ISU65_08655 PF14765 Polyketide synthase dehydratase ISU65_08655 PF00550 Phosphopantetheine attachment site ISU65_08655 PF08659 KR domain ISU65_08655 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU65_08655 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU65_08655 PF16197 Ketoacyl-synthetase C-terminal extension ISU65_08655 PF08240 Alcohol dehydrogenase GroES-like domain ISU65_08655 PF00698 Acyl transferase domain ISU65_08660 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU65_08660 PF02929 Beta galactosidase small chain ISU65_08660 PF16353 Domain of unknown function(DUF4981) ISU65_08660 PF00703 Glycosyl hydrolases family 2 ISU65_08660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU65_08665 PF00313 'Cold-shock' DNA-binding domain ISU65_08670 PF10781 Dextransucrase DSRB ISU65_08680 PF02308 MgtC family ISU65_08685 PF00689 Cation transporting ATPase, C-terminus ISU65_08685 PF00690 Cation transporter/ATPase, N-terminus ISU65_08695 PF05280 Flagellar transcriptional activator (FlhC) ISU65_08700 PF01618 MotA/TolQ/ExbB proton channel family ISU65_08705 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU65_08705 PF00691 OmpA family ISU65_08710 PF01584 CheW-like domain ISU65_08710 PF02895 Signal transducing histidine kinase, homodimeric domain ISU65_08710 PF09078 CheY binding ISU65_08710 PF01627 Hpt domain ISU65_08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_08715 PF01584 CheW-like domain ISU65_08720 PF07690 Major Facilitator Superfamily ISU65_08725 PF01042 Endoribonuclease L-PSP ISU65_08735 PF08348 YheO-like PAS domain ISU65_08735 PF13309 HTH domain ISU65_08740 PF12951 Passenger-associated-transport-repeat ISU65_08755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU65_08755 PF02203 Tar ligand binding domain homologue ISU65_08755 PF00672 HAMP domain ISU65_08760 PF02203 Tar ligand binding domain homologue ISU65_08760 PF00672 HAMP domain ISU65_08760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU65_08765 PF01739 CheR methyltransferase, SAM binding domain ISU65_08765 PF03705 CheR methyltransferase, all-alpha domain ISU65_08770 PF00072 Response regulator receiver domain ISU65_08770 PF01339 CheB methylesterase ISU65_08775 PF00072 Response regulator receiver domain ISU65_08780 PF04344 Chemotaxis phosphatase, CheZ ISU65_08785 PF01510 N-acetylmuramoyl-L-alanine amidase ISU65_08790 PF13018 Extended Signal Peptide of Type V secretion system ISU65_08790 PF03895 YadA-like membrane anchor domain ISU65_08790 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU65_08790 PF05658 Head domain of trimeric autotransporter adhesin ISU65_08800 PF00842 Alanine racemase, C-terminal domain ISU65_08800 PF01168 Alanine racemase, N-terminal domain ISU65_08825 PF01695 IstB-like ATP binding protein ISU65_08830 PF02796 Helix-turn-helix domain of resolvase ISU65_08830 PF00665 Integrase core domain ISU65_08840 PF07351 Protein of unknown function (DUF1480) ISU65_08855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_08855 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_08875 PF02470 MlaD protein ISU65_08880 PF04403 Paraquat-inducible protein A ISU65_08885 PF13185 GAF domain ISU65_08890 PF04352 ProQ/FINO family ISU65_08890 PF17516 ProQ C-terminal domain ISU65_08895 PF17804 Tail specific protease N-terminal domain ISU65_08895 PF03572 Peptidase family S41 ISU65_08895 PF00595 PDZ domain ISU65_08895 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU65_08900 PF01435 Peptidase family M48 ISU65_08905 PF00419 Fimbrial protein ISU65_08910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_08910 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_08915 PF13954 PapC N-terminal domain ISU65_08915 PF00577 Outer membrane usher protein ISU65_08915 PF13953 PapC C-terminal domain ISU65_08925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_08925 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_08930 PF07690 Major Facilitator Superfamily ISU65_08935 PF14583 Oligogalacturonate lyase ISU65_08940 PF01614 Bacterial transcriptional regulator ISU65_08940 PF09339 IclR helix-turn-helix domain ISU65_08945 PF01510 N-acetylmuramoyl-L-alanine amidase ISU65_08950 PF00375 Sodium:dicarboxylate symporter family ISU65_08955 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU65_08960 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU65_08965 PF01547 Bacterial extracellular solute-binding protein ISU65_08975 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_08980 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_08985 PF06917 Periplasmic pectate lyase ISU65_08995 PF04962 KduI/IolB family ISU65_09000 PF07883 Cupin domain ISU65_09005 PF00872 Transposase, Mutator family ISU65_09010 PF13419 Haloacid dehalogenase-like hydrolase ISU65_09015 PF14002 YniB-like protein ISU65_09020 PF03881 Fructosamine kinase ISU65_09030 PF00950 ABC 3 transport family ISU65_09035 PF00950 ABC 3 transport family ISU65_09040 PF00005 ABC transporter ISU65_09045 PF01297 Zinc-uptake complex component A periplasmic ISU65_09050 PF01464 Transglycosylase SLT domain ISU65_09055 PF01914 MarC family integral membrane protein ISU65_09065 PF13619 KTSC domain ISU65_09070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU65_09070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU65_09070 PF02824 TGS domain ISU65_09070 PF03129 Anticodon binding domain ISU65_09075 PF00707 Translation initiation factor IF-3, C-terminal domain ISU65_09075 PF05198 Translation initiation factor IF-3, N-terminal domain ISU65_09080 PF01632 Ribosomal protein L35 ISU65_09085 PF00453 Ribosomal protein L20 ISU65_09095 PF01409 tRNA synthetases class II core domain (F) ISU65_09095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU65_09100 PF01588 Putative tRNA binding domain ISU65_09100 PF03483 B3/4 domain ISU65_09100 PF03484 tRNA synthetase B5 domain ISU65_09100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU65_09100 PF03147 Ferredoxin-fold anticodon binding domain ISU65_09105 PF00216 Bacterial DNA-binding protein ISU65_09115 PF01032 FecCD transport family ISU65_09120 PF00255 Glutathione peroxidase ISU65_09125 PF00005 ABC transporter ISU65_09130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU65_09135 PF00535 Glycosyl transferase family 2 ISU65_09140 PF00551 Formyl transferase ISU65_09140 PF02911 Formyl transferase, C-terminal domain ISU65_09140 PF01370 NAD dependent epimerase/dehydratase family ISU65_09145 PF01522 Polysaccharide deacetylase ISU65_09150 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU65_09155 PF00892 EamA-like transporter family ISU65_09170 PF00877 NlpC/P60 family ISU65_09175 PF10437 Bacterial lipoate protein ligase C-terminus ISU65_09175 PF03099 Biotin/lipoate A/B protein ligase family ISU65_09185 PF00793 DAHP synthetase I family ISU65_09190 PF03618 Kinase/pyrophosphorylase ISU65_09195 PF02896 PEP-utilising enzyme, TIM barrel domain ISU65_09195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU65_09195 PF00391 PEP-utilising enzyme, mobile domain ISU65_09205 PF01594 AI-2E family transporter ISU65_09210 PF13183 4Fe-4S dicluster domain ISU65_09210 PF01565 FAD binding domain ISU65_09210 PF02913 FAD linked oxidases, C-terminal domain ISU65_09215 PF03061 Thioesterase superfamily ISU65_09220 PF01521 Iron-sulphur cluster biosynthesis ISU65_09225 PF01458 Uncharacterized protein family (UPF0051) ISU65_09230 PF00005 ABC transporter ISU65_09235 PF01458 Uncharacterized protein family (UPF0051) ISU65_09240 PF00266 Aminotransferase class-V ISU65_09245 PF02657 Fe-S metabolism associated domain ISU65_09250 PF01476 LysM domain ISU65_09250 PF17969 L,D-transpeptidase C-terminal domain ISU65_09250 PF03734 L,D-transpeptidase catalytic domain ISU65_09260 PF01695 IstB-like ATP binding protein ISU65_09265 PF00665 Integrase core domain ISU65_09265 PF02796 Helix-turn-helix domain of resolvase ISU65_09270 PF01797 Transposase IS200 like ISU65_09275 PF04728 Lipoprotein leucine-zipper ISU65_09280 PF02887 Pyruvate kinase, alpha/beta domain ISU65_09280 PF00224 Pyruvate kinase, barrel domain ISU65_09295 PF01554 MatE ISU65_09305 PF00677 Lumazine binding domain ISU65_09315 PF07690 Major Facilitator Superfamily ISU65_09320 PF03466 LysR substrate binding domain ISU65_09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_09325 PF00356 Bacterial regulatory proteins, lacI family ISU65_09335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU65_09335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU65_09340 PF00877 NlpC/P60 family ISU65_09345 PF00462 Glutaredoxin ISU65_09355 PF00929 Exonuclease ISU65_09360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU65_09370 PF16925 Tetracyclin repressor-like, C-terminal domain ISU65_09370 PF00440 Bacterial regulatory proteins, tetR family ISU65_09375 PF08019 Phosphoethanolamine transferase EptA/EptB ISU65_09375 PF00884 Sulfatase ISU65_09380 PF01047 MarR family ISU65_09385 PF05433 Glycine zipper 2TM domain ISU65_09390 PF03702 Anhydro-N-acetylmuramic acid kinase ISU65_09395 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU65_09400 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU65_09400 PF01243 Pyridoxamine 5'-phosphate oxidase ISU65_09405 PF00579 tRNA synthetases class I (W and Y) ISU65_09405 PF01479 S4 domain ISU65_09410 PF08543 Phosphomethylpyrimidine kinase ISU65_09415 PF02798 Glutathione S-transferase, N-terminal domain ISU65_09415 PF00043 Glutathione S-transferase, C-terminal domain ISU65_09420 PF11656 YjbD family (DUF3811) ISU65_09425 PF04893 Yip1 domain ISU65_09430 PF00854 POT family ISU65_09440 PF00005 ABC transporter ISU65_09445 PF00005 ABC transporter ISU65_09445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_09450 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU65_09450 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_09455 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_09460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_09465 PF01797 Transposase IS200 like ISU65_09470 PF02954 Bacterial regulatory protein, Fis family ISU65_09470 PF00158 Sigma-54 interaction domain ISU65_09475 PF04012 PspA/IM30 family ISU65_09480 PF06667 Phage shock protein B ISU65_09485 PF04024 PspC domain ISU65_09495 PF04317 YcjX-like family, DUF463 ISU65_09500 PF05128 Domain of unknown function (DUF697) ISU65_09505 PF08808 RES domain ISU65_09510 PF09722 Protein of unknown function (DUF2384) ISU65_09515 PF00158 Sigma-54 interaction domain ISU65_09515 PF18024 Helix-turn-helix domain ISU65_09520 PF01797 Transposase IS200 like ISU65_09525 PF08534 Redoxin ISU65_09530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU65_09530 PF13378 Enolase C-terminal domain-like ISU65_09535 PF00246 Zinc carboxypeptidase ISU65_09540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_09545 PF01544 CorA-like Mg2+ transporter protein ISU65_09555 PF07859 alpha/beta hydrolase fold ISU65_09560 PF01171 PP-loop family ISU65_09565 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU65_09565 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU65_09565 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU65_09565 PF10371 Domain of unknown function ISU65_09565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU65_09570 PF00893 Small Multidrug Resistance protein ISU65_09575 PF02308 MgtC family ISU65_09580 PF03891 Domain of unknown function (DUF333) ISU65_09585 PF03724 META domain ISU65_09590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU65_09590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU65_09595 PF11739 Dicarboxylate transport ISU65_09600 PF13617 YnbE-like lipoprotein ISU65_09605 PF07027 Protein of unknown function (DUF1318) ISU65_09610 PF08125 Mannitol dehydrogenase C-terminal domain ISU65_09610 PF01232 Mannitol dehydrogenase Rossmann domain ISU65_09615 PF04198 Putative sugar-binding domain ISU65_09615 PF00325 Bacterial regulatory proteins, crp family ISU65_09620 PF02525 Flavodoxin-like fold ISU65_09625 PF11898 Domain of unknown function (DUF3418) ISU65_09625 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU65_09625 PF00270 DEAD/DEAH box helicase ISU65_09625 PF04408 Helicase associated domain (HA2) ISU65_09625 PF00271 Helicase conserved C-terminal domain ISU65_09640 PF00089 Trypsin ISU65_09670 PF01695 IstB-like ATP binding protein ISU65_09675 PF02796 Helix-turn-helix domain of resolvase ISU65_09675 PF00665 Integrase core domain ISU65_09680 PF00465 Iron-containing alcohol dehydrogenase ISU65_09680 PF00171 Aldehyde dehydrogenase family ISU65_09685 PF01914 MarC family integral membrane protein ISU65_09690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_09695 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_09700 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU65_09700 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_09705 PF00005 ABC transporter ISU65_09705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_09710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_09710 PF00005 ABC transporter ISU65_09720 PF04269 Protein of unknown function, DUF440 ISU65_09725 PF13091 PLD-like domain ISU65_09725 PF13396 Phospholipase_D-nuclease N-terminal ISU65_09740 PF13505 Outer membrane protein beta-barrel domain ISU65_09755 PF03795 YCII-related domain ISU65_09760 PF03544 Gram-negative bacterial TonB protein C-terminal ISU65_09765 PF00872 Transposase, Mutator family ISU65_09770 PF03061 Thioesterase superfamily ISU65_09775 PF04279 Intracellular septation protein A ISU65_09800 PF03922 OmpW family ISU65_09810 PF00290 Tryptophan synthase alpha chain ISU65_09815 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_09820 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU65_09820 PF00218 Indole-3-glycerol phosphate synthase ISU65_09825 PF02885 Glycosyl transferase family, helical bundle domain ISU65_09825 PF00591 Glycosyl transferase family, a/b domain ISU65_09830 PF00117 Glutamine amidotransferase class-I ISU65_09835 PF00425 chorismate binding enzyme ISU65_09835 PF04715 Anthranilate synthase component I, N terminal region ISU65_09845 PF02811 PHP domain ISU65_09850 PF01300 Telomere recombination ISU65_09855 PF01479 S4 domain ISU65_09855 PF00849 RNA pseudouridylate synthase ISU65_09860 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU65_09865 PF00106 short chain dehydrogenase ISU65_09870 PF08496 Peptidase family S49 N-terminal ISU65_09870 PF01343 Peptidase family S49 ISU65_09875 PF10692 Protein of unknown function (DUF2498) ISU65_09885 PF01751 Toprim domain ISU65_09885 PF01396 Topoisomerase DNA binding C4 zinc finger ISU65_09885 PF08272 Topoisomerase I zinc-ribbon-like ISU65_09885 PF01131 DNA topoisomerase ISU65_09890 PF03466 LysR substrate binding domain ISU65_09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_09905 PF00925 GTP cyclohydrolase II ISU65_09910 PF01569 PAP2 superfamily ISU65_09915 PF06305 Lipopolysaccharide assembly protein A domain ISU65_09920 PF18073 Rubredoxin metal binding domain ISU65_09930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU65_09935 PF01253 Translation initiation factor SUI1 ISU65_09940 PF05433 Glycine zipper 2TM domain ISU65_09945 PF00596 Class II Aldolase and Adducin N-terminal domain ISU65_09955 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU65_09960 PF04328 Selenoprotein, putative ISU65_09965 PF13722 5TM C-terminal transporter carbon starvation CstA ISU65_09965 PF02554 Carbon starvation protein CstA ISU65_09975 PF07690 Major Facilitator Superfamily ISU65_09980 PF01370 NAD dependent epimerase/dehydratase family ISU65_09985 PF00633 Helix-hairpin-helix motif ISU65_09985 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU65_09985 PF10576 Iron-sulfur binding domain of endonuclease III ISU65_09990 PF02508 Rnf-Nqr subunit, membrane protein ISU65_09995 PF04205 FMN-binding domain ISU65_10000 PF03116 NQR2, RnfD, RnfE family ISU65_10005 PF06445 GyrI-like small molecule binding domain ISU65_10005 PF12833 Helix-turn-helix domain ISU65_10010 PF13237 4Fe-4S dicluster domain ISU65_10010 PF13375 RnfC Barrel sandwich hybrid domain ISU65_10010 PF10531 SLBB domain ISU65_10010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU65_10015 PF04060 Putative Fe-S cluster ISU65_10020 PF02508 Rnf-Nqr subunit, membrane protein ISU65_10025 PF10754 Protein of unknown function (DUF2569) ISU65_10030 PF00664 ABC transporter transmembrane region ISU65_10030 PF03412 Peptidase C39 family ISU65_10030 PF00005 ABC transporter ISU65_10035 PF00664 ABC transporter transmembrane region ISU65_10035 PF00005 ABC transporter ISU65_10040 PF13533 Biotin-lipoyl like ISU65_10050 PF03412 Peptidase C39 family ISU65_10050 PF00005 ABC transporter ISU65_10050 PF00664 ABC transporter transmembrane region ISU65_10055 PF02610 L-arabinose isomerase ISU65_10055 PF11762 L-arabinose isomerase C-terminal domain ISU65_10060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_10065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU65_10070 PF00005 ABC transporter ISU65_10075 PF02653 Branched-chain amino acid transport system / permease component ISU65_10080 PF12833 Helix-turn-helix domain ISU65_10080 PF02311 AraC-like ligand binding domain ISU65_10085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU65_10085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU65_10090 PF13593 SBF-like CPA transporter family (DUF4137) ISU65_10100 PF06097 Bacterial protein of unknown function (DUF945) ISU65_10105 PF01238 Phosphomannose isomerase type I ISU65_10110 PF00206 Lyase ISU65_10110 PF10415 Fumarase C C-terminus ISU65_10115 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU65_10120 PF07690 Major Facilitator Superfamily ISU65_10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_10125 PF03466 LysR substrate binding domain ISU65_10130 PF00480 ROK family ISU65_10140 PF00654 Voltage gated chloride channel ISU65_10145 PF00356 Bacterial regulatory proteins, lacI family ISU65_10160 PF09084 NMT1/THI5 like ISU65_10165 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_10170 PF00005 ABC transporter ISU65_10175 PF01048 Phosphorylase superfamily ISU65_10175 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU65_10205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU65_10205 PF00205 Thiamine pyrophosphate enzyme, central domain ISU65_10205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU65_10210 PF01842 ACT domain ISU65_10215 PF13419 Haloacid dehalogenase-like hydrolase ISU65_10230 PF00245 Alkaline phosphatase ISU65_10235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU65_10235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU65_10240 PF13545 Crp-like helix-turn-helix domain ISU65_10240 PF00027 Cyclic nucleotide-binding domain ISU65_10245 PF00582 Universal stress protein family ISU65_10250 PF02233 NAD(P) transhydrogenase beta subunit ISU65_10255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU65_10255 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU65_10255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU65_10260 PF07338 Protein of unknown function (DUF1471) ISU65_10265 PF13520 Amino acid permease ISU65_10275 PF00486 Transcriptional regulatory protein, C terminal ISU65_10275 PF00072 Response regulator receiver domain ISU65_10280 PF00512 His Kinase A (phospho-acceptor) domain ISU65_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_10280 PF00672 HAMP domain ISU65_10285 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU65_10290 PF01797 Transposase IS200 like ISU65_10295 PF02796 Helix-turn-helix domain of resolvase ISU65_10295 PF00665 Integrase core domain ISU65_10300 PF01695 IstB-like ATP binding protein ISU65_10305 PF00265 Thymidine kinase ISU65_10310 PF00816 H-NS histone family ISU65_10315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU65_10315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU65_10315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU65_10320 PF00072 Response regulator receiver domain ISU65_10325 PF02810 SEC-C motif ISU65_10330 PF00551 Formyl transferase ISU65_10330 PF01842 ACT domain ISU65_10335 PF00872 Transposase, Mutator family ISU65_10355 PF03466 LysR substrate binding domain ISU65_10355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_10360 PF03372 Endonuclease/Exonuclease/phosphatase family ISU65_10365 PF00293 NUDIX domain ISU65_10370 PF07383 Protein of unknown function (DUF1496) ISU65_10375 PF01131 DNA topoisomerase ISU65_10375 PF01751 Toprim domain ISU65_10380 PF02769 AIR synthase related protein, C-terminal domain ISU65_10380 PF00586 AIR synthase related protein, N-terminal domain ISU65_10385 PF00881 Nitroreductase family ISU65_10390 PF01343 Peptidase family S49 ISU65_10395 PF00710 Asparaginase, N-terminal ISU65_10395 PF17763 Glutaminase/Asparaginase C-terminal domain ISU65_10400 PF00857 Isochorismatase family ISU65_10405 PF07023 Protein of unknown function (DUF1315) ISU65_10410 PF01641 SelR domain ISU65_10415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU65_10415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU65_10420 PF01263 Aldose 1-epimerase ISU65_10425 PF06629 MltA-interacting protein MipA ISU65_10430 PF06798 PrkA serine protein kinase C-terminal domain ISU65_10430 PF08298 PrkA AAA domain ISU65_10435 PF04285 Protein of unknown function (DUF444) ISU65_10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_10445 PF03466 LysR substrate binding domain ISU65_10450 PF02678 Pirin ISU65_10450 PF05726 Pirin C-terminal cupin domain ISU65_10455 PF07690 Major Facilitator Superfamily ISU65_10460 PF01266 FAD dependent oxidoreductase ISU65_10465 PF04293 SpoVR like protein ISU65_10470 PF00392 Bacterial regulatory proteins, gntR family ISU65_10470 PF07840 FadR C-terminal domain ISU65_10480 PF02600 Disulfide bond formation protein DsbB ISU65_10495 PF00266 Aminotransferase class-V ISU65_10505 PF00872 Transposase, Mutator family ISU65_10510 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU65_10665 PF00872 Transposase, Mutator family ISU65_10730 PF06530 Phage antitermination protein Q ISU65_10740 PF05772 NinB protein ISU65_10755 PF01695 IstB-like ATP binding protein ISU65_10760 PF02796 Helix-turn-helix domain of resolvase ISU65_10760 PF00665 Integrase core domain ISU65_10765 PF00589 Phage integrase family ISU65_10765 PF12167 Arm DNA-binding domain ISU65_10770 PF03692 Putative zinc- or iron-chelating domain ISU65_10775 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU65_10780 PF13406 Transglycosylase SLT domain ISU65_10785 PF05166 YcgL domain ISU65_10790 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU65_10790 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU65_10795 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU65_10800 PF03776 Septum formation topological specificity factor MinE ISU65_10805 PF01612 3'-5' exonuclease ISU65_10805 PF00570 HRDC domain ISU65_10810 PF13193 AMP-binding enzyme C-terminal domain ISU65_10810 PF00501 AMP-binding enzyme ISU65_10825 PF00814 Glycoprotease family ISU65_10830 PF13307 Helicase C-terminal domain ISU65_10830 PF04851 Type III restriction enzyme, res subunit ISU65_10835 PF01042 Endoribonuclease L-PSP ISU65_10840 PF00893 Small Multidrug Resistance protein ISU65_10845 PF00893 Small Multidrug Resistance protein ISU65_10850 PF01081 KDPG and KHG aldolase ISU65_10855 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU65_10855 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU65_10860 PF01418 Helix-turn-helix domain, rpiR family ISU65_10860 PF01380 SIS domain ISU65_10865 PF00224 Pyruvate kinase, barrel domain ISU65_10865 PF02887 Pyruvate kinase, alpha/beta domain ISU65_10875 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU65_10880 PF08525 Opacity-associated protein A N-terminal motif ISU65_10880 PF01551 Peptidase family M23 ISU65_10880 PF01476 LysM domain ISU65_10885 PF01297 Zinc-uptake complex component A periplasmic ISU65_10890 PF00005 ABC transporter ISU65_10895 PF00950 ABC 3 transport family ISU65_10900 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU65_10900 PF05491 RuvB C-terminal winged helix domain ISU65_10900 PF17864 RuvB AAA lid domain ISU65_10905 PF07499 RuvA, C-terminal domain ISU65_10905 PF01330 RuvA N terminal domain ISU65_10910 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU65_10915 PF01709 Transcriptional regulator ISU65_10920 PF00293 NUDIX domain ISU65_10925 PF01336 OB-fold nucleic acid binding domain ISU65_10925 PF00152 tRNA synthetases class II (D, K and N) ISU65_10925 PF02938 GAD domain ISU65_10930 PF01904 Protein of unknown function DUF72 ISU65_10935 PF01124 MAPEG family ISU65_10940 PF13649 Methyltransferase domain ISU65_10945 PF08003 Protein of unknown function (DUF1698) ISU65_10950 PF03932 CutC family ISU65_10955 PF06185 YecM protein ISU65_10960 PF05746 DALR anticodon binding domain ISU65_10960 PF00750 tRNA synthetases class I (R) ISU65_10960 PF03485 Arginyl tRNA synthetase N terminal domain ISU65_10965 PF05860 haemagglutination activity domain ISU65_10965 PF13332 Hemagglutinin repeat ISU65_10970 PF17287 POTRA domain ISU65_10970 PF08479 POTRA domain, ShlB-type ISU65_10970 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU65_10975 PF03023 Lipid II flippase MurJ ISU65_10980 PF04337 Protein of unknown function, DUF480 ISU65_10985 PF13302 Acetyltransferase (GNAT) domain ISU65_10990 PF07690 Major Facilitator Superfamily ISU65_10995 PF07273 Protein of unknown function (DUF1439) ISU65_11000 PF02613 Nitrate reductase delta subunit ISU65_11005 PF02811 PHP domain ISU65_11015 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU65_11015 PF00480 ROK family ISU65_11020 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU65_11030 PF01797 Transposase IS200 like ISU65_11035 PF08402 TOBE domain ISU65_11035 PF00005 ABC transporter ISU65_11040 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_11045 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_11055 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU65_11070 PF00793 DAHP synthetase I family ISU65_11075 PF13369 Transglutaminase-like superfamily ISU65_11080 PF04247 Invasion gene expression up-regulator, SirB ISU65_11085 PF13847 Methyltransferase domain ISU65_11085 PF17827 PrmC N-terminal domain ISU65_11090 PF03462 PCRF domain ISU65_11090 PF00472 RF-1 domain ISU65_11095 PF01488 Shikimate / quinate 5-dehydrogenase ISU65_11095 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU65_11095 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU65_11100 PF03550 Outer membrane lipoprotein LolB ISU65_11105 PF00288 GHMP kinases N terminal domain ISU65_11105 PF08544 GHMP kinases C terminal ISU65_11110 PF14572 Phosphoribosyl synthetase-associated domain ISU65_11110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU65_11115 PF10762 Protein of unknown function (DUF2583) ISU65_11120 PF01195 Peptidyl-tRNA hydrolase ISU65_11125 PF06071 Protein of unknown function (DUF933) ISU65_11125 PF01926 50S ribosome-binding GTPase ISU65_11165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU65_11170 PF00072 Response regulator receiver domain ISU65_11170 PF00486 Transcriptional regulatory protein, C terminal ISU65_11175 PF00672 HAMP domain ISU65_11175 PF00512 His Kinase A (phospho-acceptor) domain ISU65_11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_11220 PF08242 Methyltransferase domain ISU65_11240 PF00872 Transposase, Mutator family ISU65_11285 PF01370 NAD dependent epimerase/dehydratase family ISU65_11290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU65_11290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU65_11295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU65_11295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU65_11305 PF05962 HutD ISU65_11310 PF01979 Amidohydrolase family ISU65_11315 PF07702 UTRA domain ISU65_11315 PF00392 Bacterial regulatory proteins, gntR family ISU65_11320 PF01979 Amidohydrolase family ISU65_11335 PF01695 IstB-like ATP binding protein ISU65_11340 PF00665 Integrase core domain ISU65_11340 PF02796 Helix-turn-helix domain of resolvase ISU65_11350 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU65_11355 PF04996 Succinylarginine dihydrolase ISU65_11360 PF00171 Aldehyde dehydrogenase family ISU65_11365 PF04958 Arginine N-succinyltransferase beta subunit ISU65_11370 PF00202 Aminotransferase class-III ISU65_11375 PF00392 Bacterial regulatory proteins, gntR family ISU65_11375 PF00155 Aminotransferase class I and II ISU65_11385 PF07730 Histidine kinase ISU65_11385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU65_11385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_11385 PF00672 HAMP domain ISU65_11390 PF01699 Sodium/calcium exchanger protein ISU65_11395 PF02562 PhoH-like protein ISU65_11410 PF13994 PgaD-like protein ISU65_11415 PF00535 Glycosyl transferase family 2 ISU65_11420 PF14883 Hypothetical glycosyl hydrolase family 13 ISU65_11420 PF01522 Polysaccharide deacetylase ISU65_11430 PF00557 Metallopeptidase family M24 ISU65_11435 PF03848 Tellurite resistance protein TehB ISU65_11435 PF09313 Domain of unknown function (DUF1971) ISU65_11445 PF00578 AhpC/TSA family ISU65_11450 PF12704 MacB-like periplasmic core domain ISU65_11450 PF00005 ABC transporter ISU65_11450 PF02687 FtsX-like permease family ISU65_11470 PF10634 Fe2+ transport protein ISU65_11475 PF03239 Iron permease FTR1 family ISU65_11490 PF04960 Glutaminase ISU65_11500 PF00455 DeoR C terminal sensor domain ISU65_11500 PF08220 DeoR-like helix-turn-helix domain ISU65_11505 PF00324 Amino acid permease ISU65_11510 PF00155 Aminotransferase class I and II ISU65_11515 PF02508 Rnf-Nqr subunit, membrane protein ISU65_11525 PF04909 Amidohydrolase ISU65_11530 PF07690 Major Facilitator Superfamily ISU65_11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_11545 PF03466 LysR substrate binding domain ISU65_11550 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU65_11555 PF01575 MaoC like domain ISU65_11560 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISU65_11560 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISU65_11565 PF00196 Bacterial regulatory proteins, luxR family ISU65_11565 PF00072 Response regulator receiver domain ISU65_11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_11570 PF00512 His Kinase A (phospho-acceptor) domain ISU65_11570 PF01627 Hpt domain ISU65_11570 PF00989 PAS fold ISU65_11570 PF00072 Response regulator receiver domain ISU65_11570 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_11580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_11580 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_11590 PF01695 IstB-like ATP binding protein ISU65_11595 PF02796 Helix-turn-helix domain of resolvase ISU65_11595 PF00665 Integrase core domain ISU65_11610 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_11610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_11620 PF00589 Phage integrase family ISU65_11620 PF13356 Arm DNA-binding domain ISU65_11625 PF00425 chorismate binding enzyme ISU65_11630 PF07690 Major Facilitator Superfamily ISU65_11635 PF00664 ABC transporter transmembrane region ISU65_11635 PF00005 ABC transporter ISU65_11640 PF04954 Siderophore-interacting protein ISU65_11640 PF00664 ABC transporter transmembrane region ISU65_11640 PF00005 ABC transporter ISU65_11640 PF08021 Siderophore-interacting FAD-binding domain ISU65_11650 PF00668 Condensation domain ISU65_11650 PF00550 Phosphopantetheine attachment site ISU65_11650 PF08242 Methyltransferase domain ISU65_11650 PF00501 AMP-binding enzyme ISU65_11655 PF00550 Phosphopantetheine attachment site ISU65_11655 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU65_11655 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU65_11655 PF00698 Acyl transferase domain ISU65_11655 PF16197 Ketoacyl-synthetase C-terminal extension ISU65_11655 PF00668 Condensation domain ISU65_11665 PF00975 Thioesterase domain ISU65_11670 PF13193 AMP-binding enzyme C-terminal domain ISU65_11670 PF00501 AMP-binding enzyme ISU65_11675 PF00593 TonB dependent receptor ISU65_11675 PF07715 TonB-dependent Receptor Plug Domain ISU65_11710 PF01695 IstB-like ATP binding protein ISU65_11715 PF00665 Integrase core domain ISU65_11715 PF02796 Helix-turn-helix domain of resolvase ISU65_11735 PF08402 TOBE domain ISU65_11735 PF00005 ABC transporter ISU65_11740 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_11745 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_11755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU65_11755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU65_11760 PF00392 Bacterial regulatory proteins, gntR family ISU65_11760 PF07702 UTRA domain ISU65_11830 PF05638 Type VI secretion system effector, Hcp ISU65_11875 PF01066 CDP-alcohol phosphatidyltransferase ISU65_11880 PF01541 GIY-YIG catalytic domain ISU65_11880 PF02151 UvrB/uvrC motif ISU65_11880 PF08459 UvrC Helix-hairpin-helix N-terminal ISU65_11885 PF00196 Bacterial regulatory proteins, luxR family ISU65_11885 PF00072 Response regulator receiver domain ISU65_11890 PF10769 Protein of unknown function (DUF2594) ISU65_11895 PF06942 GlpM protein ISU65_11905 PF13505 Outer membrane protein beta-barrel domain ISU65_11915 PF00324 Amino acid permease ISU65_11920 PF01344 Kelch motif ISU65_11925 PF03358 NADPH-dependent FMN reductase ISU65_11930 PF04261 Dyp-type peroxidase family ISU65_11935 PF13473 Cupredoxin-like domain ISU65_11935 PF09375 Imelysin ISU65_11940 PF03239 Iron permease FTR1 family ISU65_11945 PF00474 Sodium:solute symporter family ISU65_11955 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU65_11955 PF14850 DNA-binding domain of Proline dehydrogenase ISU65_11955 PF01619 Proline dehydrogenase ISU65_11955 PF00171 Aldehyde dehydrogenase family ISU65_11970 PF00005 ABC transporter ISU65_11975 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_11980 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_11985 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_11990 PF02899 Phage integrase, N-terminal SAM-like domain ISU65_11995 PF04545 Sigma-70, region 4 ISU65_11995 PF04542 Sigma-70 region 2 ISU65_11995 PF04539 Sigma-70 region 3 ISU65_12000 PF08884 Flagellin D3 domain ISU65_12000 PF00669 Bacterial flagellin N-terminal helical region ISU65_12000 PF00700 Bacterial flagellin C-terminal helical region ISU65_12005 PF07195 Flagellar hook-associated protein 2 C-terminus ISU65_12005 PF02465 Flagellar hook-associated protein 2 N-terminus ISU65_12005 PF07196 Flagellin hook IN motif ISU65_12010 PF02561 Flagellar protein FliS ISU65_12015 PF05400 Flagellar protein FliT ISU65_12020 PF12833 Helix-turn-helix domain ISU65_12025 PF02743 Cache domain ISU65_12025 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU65_12025 PF00672 HAMP domain ISU65_12030 PF01966 HD domain ISU65_12035 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU65_12055 PF02049 Flagellar hook-basal body complex protein FliE ISU65_12060 PF08345 Flagellar M-ring protein C-terminal ISU65_12060 PF01514 Secretory protein of YscJ/FliF family ISU65_12065 PF14842 FliG N-terminal domain ISU65_12065 PF01706 FliG C-terminal domain ISU65_12065 PF14841 FliG middle domain ISU65_12070 PF02108 Flagellar assembly protein FliH ISU65_12075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU65_12075 PF18269 T3SS EscN ATPase C-terminal domain ISU65_12080 PF02050 Flagellar FliJ protein ISU65_12085 PF02120 Flagellar hook-length control protein FliK ISU65_12090 PF03748 Flagellar basal body-associated protein FliL ISU65_12095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU65_12095 PF02154 Flagellar motor switch protein FliM ISU65_12100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU65_12100 PF16973 Flagellar motor switch protein FliN N-terminal ISU65_12105 PF04347 Flagellar biosynthesis protein, FliO ISU65_12110 PF00813 FliP family ISU65_12115 PF01313 Bacterial export proteins, family 3 ISU65_12120 PF01311 Bacterial export proteins, family 1 ISU65_12135 PF00294 pfkB family carbohydrate kinase ISU65_12140 PF02653 Branched-chain amino acid transport system / permease component ISU65_12145 PF00005 ABC transporter ISU65_12150 PF13407 Periplasmic binding protein domain ISU65_12155 PF02653 Branched-chain amino acid transport system / permease component ISU65_12160 PF00596 Class II Aldolase and Adducin N-terminal domain ISU65_12165 PF04198 Putative sugar-binding domain ISU65_12170 PF00669 Bacterial flagellin N-terminal helical region ISU65_12175 PF00460 Flagella basal body rod protein ISU65_12175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU65_12180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU65_12180 PF10135 Rod binding protein ISU65_12185 PF02119 Flagellar P-ring protein ISU65_12190 PF02107 Flagellar L-ring protein ISU65_12205 PF07559 Flagellar basal body protein FlaE ISU65_12205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU65_12205 PF00460 Flagella basal body rod protein ISU65_12210 PF03963 Flagellar hook capping protein - N-terminal region ISU65_12210 PF13860 FlgD Ig-like domain ISU65_12210 PF13861 FlgD Tudor-like domain ISU65_12215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU65_12215 PF00460 Flagella basal body rod protein ISU65_12220 PF00460 Flagella basal body rod protein ISU65_12225 PF17656 FlgA N-terminal domain ISU65_12225 PF13144 Chaperone for flagella basal body P-ring formation ISU65_12230 PF04316 Anti-sigma-28 factor, FlgM ISU65_12235 PF05130 FlgN protein ISU65_12245 PF01797 Transposase IS200 like ISU65_12255 PF06366 Flagellar protein FlhE ISU65_12260 PF00771 FHIPEP family ISU65_12265 PF01312 FlhB HrpN YscU SpaS Family ISU65_12280 PF10709 Protein of unknown function (DUF2511) ISU65_12290 PF04234 CopC domain ISU65_12295 PF00210 Ferritin-like domain ISU65_12300 PF06440 DNA polymerase III, theta subunit ISU65_12305 PF00561 alpha/beta hydrolase fold ISU65_12310 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU65_12310 PF00326 Prolyl oligopeptidase family ISU65_12315 PF13995 YebF-like protein ISU65_12320 PF04266 ASCH domain ISU65_12325 PF07130 YebG protein ISU65_12330 PF00271 Helicase conserved C-terminal domain ISU65_12330 PF00270 DEAD/DEAH box helicase ISU65_12330 PF03880 DbpA RNA binding domain ISU65_12335 PF02222 ATP-grasp domain ISU65_12340 PF03701 Uncharacterised protein family (UPF0181) ISU65_12345 PF00425 chorismate binding enzyme ISU65_12345 PF04715 Anthranilate synthase component I, N terminal region ISU65_12350 PF00293 NUDIX domain ISU65_12355 PF03315 Serine dehydratase beta chain ISU65_12355 PF03313 Serine dehydratase alpha chain ISU65_12360 PF01613 Flavin reductase like domain ISU65_12365 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU65_12365 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU65_12375 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU65_12380 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU65_12385 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU65_12390 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU65_12395 PF00171 Aldehyde dehydrogenase family ISU65_12400 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU65_12405 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU65_12410 PF01047 MarR family ISU65_12415 PF03471 Transporter associated domain ISU65_12415 PF03741 Integral membrane protein TerC family ISU65_12420 PF03610 PTS system fructose IIA component ISU65_12420 PF03830 PTS system sorbose subfamily IIB component ISU65_12425 PF03609 PTS system sorbose-specific iic component ISU65_12430 PF03613 PTS system mannose/fructose/sorbose family IID component ISU65_12435 PF06173 Protein of unknown function (DUF986) ISU65_12440 PF02659 Putative manganese efflux pump ISU65_12445 PF07715 TonB-dependent Receptor Plug Domain ISU65_12445 PF00593 TonB dependent receptor ISU65_12460 PF13847 Methyltransferase domain ISU65_12465 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU65_12470 PF00313 'Cold-shock' DNA-binding domain ISU65_12475 PF10736 Protein of unknown function (DUF2627) ISU65_12480 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU65_12485 PF00324 Amino acid permease ISU65_12500 PF13974 YebO-like protein ISU65_12505 PF13998 MgrB protein ISU65_12510 PF13996 YobH-like protein ISU65_12515 PF10964 Protein of unknown function (DUF2766) ISU65_12520 PF12833 Helix-turn-helix domain ISU65_12530 PF00664 ABC transporter transmembrane region ISU65_12530 PF00005 ABC transporter ISU65_12545 PF06167 Glucose-regulated metallo-peptidase M90 ISU65_12555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU65_12555 PF00356 Bacterial regulatory proteins, lacI family ISU65_12560 PF01695 IstB-like ATP binding protein ISU65_12565 PF02796 Helix-turn-helix domain of resolvase ISU65_12565 PF00665 Integrase core domain ISU65_12575 PF00872 Transposase, Mutator family ISU65_12580 PF01306 LacY proton/sugar symporter ISU65_12585 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU65_12585 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU65_12595 PF01648 4'-phosphopantetheinyl transferase superfamily ISU65_12595 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU65_12600 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU65_12610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU65_12615 PF00072 Response regulator receiver domain ISU65_12615 PF00196 Bacterial regulatory proteins, luxR family ISU65_12625 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU65_12635 PF01522 Polysaccharide deacetylase ISU65_12645 PF01554 MatE ISU65_12650 PF00764 Arginosuccinate synthase ISU65_12655 PF01070 FMN-dependent dehydrogenase ISU65_12660 PF13378 Enolase C-terminal domain-like ISU65_12660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU65_12665 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU65_12675 PF04134 Protein of unknown function, DUF393 ISU65_12680 PF07690 Major Facilitator Superfamily ISU65_12685 PF11924 Inverse autotransporter, beta-domain ISU65_12685 PF09134 Invasin, domain 3 ISU65_12685 PF02369 Bacterial Ig-like domain (group 1) ISU65_12690 PF00872 Transposase, Mutator family ISU65_12695 PF04363 Protein of unknown function (DUF496) ISU65_12705 PF00929 Exonuclease ISU65_12705 PF08411 Exonuclease C-terminal ISU65_12715 PF13520 Amino acid permease ISU65_12720 PF00465 Iron-containing alcohol dehydrogenase ISU65_12725 PF00005 ABC transporter ISU65_12730 PF00005 ABC transporter ISU65_12735 PF02653 Branched-chain amino acid transport system / permease component ISU65_12750 PF01370 NAD dependent epimerase/dehydratase family ISU65_12760 PF08029 HisG, C-terminal domain ISU65_12760 PF01634 ATP phosphoribosyltransferase ISU65_12765 PF00815 Histidinol dehydrogenase ISU65_12770 PF00155 Aminotransferase class I and II ISU65_12775 PF00475 Imidazoleglycerol-phosphate dehydratase ISU65_12780 PF00117 Glutamine amidotransferase class-I ISU65_12785 PF00977 Histidine biosynthesis protein ISU65_12790 PF00977 Histidine biosynthesis protein ISU65_12795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU65_12795 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU65_12800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU65_12800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU65_12805 PF00483 Nucleotidyl transferase ISU65_12810 PF00483 Nucleotidyl transferase ISU65_12820 PF07660 Secretin and TonB N terminus short domain ISU65_12820 PF07715 TonB-dependent Receptor Plug Domain ISU65_12820 PF00593 TonB dependent receptor ISU65_12825 PF01497 Periplasmic binding protein ISU65_12830 PF01032 FecCD transport family ISU65_12835 PF01032 FecCD transport family ISU65_12840 PF00005 ABC transporter ISU65_12845 PF04183 IucA / IucC family ISU65_12845 PF06276 Ferric iron reductase FhuF-like transporter ISU65_12855 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU65_12860 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU65_12865 PF06276 Ferric iron reductase FhuF-like transporter ISU65_12865 PF11575 FhuF 2Fe-2S C-terminal domain ISU65_12870 PF00571 CBS domain ISU65_12870 PF03741 Integral membrane protein TerC family ISU65_12870 PF03471 Transporter associated domain ISU65_12875 PF05170 AsmA family ISU65_12880 PF00692 dUTPase ISU65_12885 PF00485 Phosphoribulokinase / Uridine kinase family ISU65_12890 PF10609 NUBPL iron-transfer P-loop NTPase ISU65_12895 PF01588 Putative tRNA binding domain ISU65_12895 PF09334 tRNA synthetases class I (M) ISU65_12900 PF01797 Transposase IS200 like ISU65_12920 PF07690 Major Facilitator Superfamily ISU65_12925 PF03788 LrgA family ISU65_12930 PF04172 LrgB-like family ISU65_12935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU65_12935 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU65_12940 PF03949 Malic enzyme, NAD binding domain ISU65_12940 PF00390 Malic enzyme, N-terminal domain ISU65_12945 PF02698 DUF218 domain ISU65_12950 PF02653 Branched-chain amino acid transport system / permease component ISU65_12955 PF00005 ABC transporter ISU65_12960 PF13407 Periplasmic binding protein domain ISU65_12965 PF04235 Protein of unknown function (DUF418) ISU65_12970 PF01227 GTP cyclohydrolase I ISU65_12975 PF06779 Uncharacterised MFS-type transporter YbfB ISU65_12980 PF03466 LysR substrate binding domain ISU65_12980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_12985 PF00107 Zinc-binding dehydrogenase ISU65_12985 PF08240 Alcohol dehydrogenase GroES-like domain ISU65_12990 PF00756 Putative esterase ISU65_13005 PF13533 Biotin-lipoyl like ISU65_13010 PF00005 ABC transporter ISU65_13020 PF00994 Probable molybdopterin binding domain ISU65_13020 PF03454 MoeA C-terminal region (domain IV) ISU65_13020 PF03453 MoeA N-terminal region (domain I and II) ISU65_13025 PF00899 ThiF family ISU65_13030 PF00872 Transposase, Mutator family ISU65_13040 PF12848 ABC transporter ISU65_13040 PF00005 ABC transporter ISU65_13130 PF13296 Putative type VI secretion system Rhs element Vgr ISU65_13130 PF04717 Type VI secretion system, phage-baseplate injector ISU65_13130 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU65_13135 PF17871 AAA lid domain ISU65_13135 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_13135 PF07724 AAA domain (Cdc48 subfamily) ISU65_13135 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_13145 PF00691 OmpA family ISU65_13145 PF05736 OprF membrane domain ISU65_13160 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU65_13170 PF00698 Acyl transferase domain ISU65_13175 PF00550 Phosphopantetheine attachment site ISU65_13190 PF00378 Enoyl-CoA hydratase/isomerase ISU65_13200 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU65_13200 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU65_13210 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU65_13210 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU65_13215 PF07977 FabA-like domain ISU65_13230 PF08031 Berberine and berberine like ISU65_13230 PF01565 FAD binding domain ISU65_13250 PF04358 DsrC like protein ISU65_13255 PF00708 Acylphosphatase ISU65_13260 PF10672 S-adenosylmethionine-dependent methyltransferase ISU65_13260 PF17785 PUA-like domain ISU65_13265 PF08755 Hemimethylated DNA-binding protein YccV like ISU65_13270 PF13380 CoA binding domain ISU65_13275 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU65_13280 PF02142 MGS-like domain ISU65_13285 PF12462 DNA helicase IV / RNA helicase N terminal ISU65_13285 PF00580 UvrD/REP helicase N-terminal domain ISU65_13285 PF13361 UvrD-like helicase C-terminal domain ISU65_13290 PF03733 Inner membrane component domain ISU65_13295 PF12805 FUSC-like inner membrane protein yccS ISU65_13300 PF04994 TfoX C-terminal domain ISU65_13300 PF04993 TfoX N-terminal domain ISU65_13305 PF03846 Cell division inhibitor SulA ISU65_13310 PF00691 OmpA family ISU65_13310 PF01389 OmpA-like transmembrane domain ISU65_13315 PF01797 Transposase IS200 like ISU65_13320 PF17414 MatP C-terminal ribbon-helix-helix domain ISU65_13320 PF06303 MatP N-terminal domain ISU65_13325 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU65_13325 PF13654 AAA domain ISU65_13330 PF07977 FabA-like domain ISU65_13345 PF02796 Helix-turn-helix domain of resolvase ISU65_13345 PF00665 Integrase core domain ISU65_13350 PF01695 IstB-like ATP binding protein ISU65_13360 PF01797 Transposase IS200 like ISU65_13365 PF04957 Ribosome modulation factor ISU65_13370 PF03886 ABC-type transport auxiliary lipoprotein component ISU65_13375 PF02470 MlaD protein ISU65_13380 PF04403 Paraquat-inducible protein A ISU65_13385 PF16326 ABC transporter C-terminal domain ISU65_13385 PF12848 ABC transporter ISU65_13385 PF00005 ABC transporter ISU65_13390 PF10672 S-adenosylmethionine-dependent methyltransferase ISU65_13390 PF02926 THUMP domain ISU65_13390 PF01170 Putative RNA methylase family UPF0020 ISU65_13395 PF03476 MOSC N-terminal beta barrel domain ISU65_13395 PF03473 MOSC domain ISU65_13395 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU65_13400 PF07126 Cell-division protein ZapC ISU65_13405 PF01180 Dihydroorotate dehydrogenase ISU65_13410 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU65_13410 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU65_13410 PF01433 Peptidase family M1 domain ISU65_13415 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU65_13415 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU65_13420 PF01336 OB-fold nucleic acid binding domain ISU65_13420 PF00152 tRNA synthetases class II (D, K and N) ISU65_13425 PF00267 Gram-negative porin ISU65_13430 PF00155 Aminotransferase class I and II ISU65_13440 PF00753 Metallo-beta-lactamase superfamily ISU65_13445 PF05951 Bacterial protein of unknown function (DUF882) ISU65_13450 PF01471 Putative peptidoglycan binding domain ISU65_13450 PF03734 L,D-transpeptidase catalytic domain ISU65_13455 PF01797 Transposase IS200 like ISU65_13460 PF16330 MukB hinge domain ISU65_13460 PF04310 MukB N-terminal ISU65_13465 PF04288 MukE-like family ISU65_13470 PF17193 MukF C-terminal domain ISU65_13470 PF03882 MukF winged-helix domain ISU65_13470 PF17192 MukF middle domain ISU65_13475 PF13847 Methyltransferase domain ISU65_13480 PF01636 Phosphotransferase enzyme family ISU65_13485 PF02348 Cytidylyltransferase ISU65_13490 PF03966 Trm112p-like protein ISU65_13495 PF00313 'Cold-shock' DNA-binding domain ISU65_13500 PF07063 Domain of unknown function (DUF1338) ISU65_13505 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU65_13510 PF00005 ABC transporter ISU65_13510 PF00664 ABC transporter transmembrane region ISU65_13515 PF00753 Metallo-beta-lactamase superfamily ISU65_13515 PF03772 Competence protein ISU65_13520 PF00216 Bacterial DNA-binding protein ISU65_13525 PF00575 S1 RNA binding domain ISU65_13530 PF02224 Cytidylate kinase ISU65_13540 PF00266 Aminotransferase class-V ISU65_13550 PF13018 Extended Signal Peptide of Type V secretion system ISU65_13550 PF03895 YadA-like membrane anchor domain ISU65_13550 PF05658 Head domain of trimeric autotransporter adhesin ISU65_13550 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU65_13550 PF13018 Extended Signal Peptide of Type V secretion system ISU65_13550 PF03895 YadA-like membrane anchor domain ISU65_13550 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU65_13550 PF05658 Head domain of trimeric autotransporter adhesin ISU65_13555 PF17763 Glutaminase/Asparaginase C-terminal domain ISU65_13555 PF00710 Asparaginase, N-terminal ISU65_13560 PF18381 YcaO cyclodehydratase C-terminal domain ISU65_13560 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU65_13565 PF01226 Formate/nitrite transporter ISU65_13570 PF02901 Pyruvate formate lyase-like ISU65_13570 PF01228 Glycine radical ISU65_13580 PF04055 Radical SAM superfamily ISU65_13590 PF02796 Helix-turn-helix domain of resolvase ISU65_13590 PF00665 Integrase core domain ISU65_13595 PF01695 IstB-like ATP binding protein ISU65_13605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU65_13605 PF02403 Seryl-tRNA synthetase N-terminal domain ISU65_13610 PF16193 AAA C-terminal domain ISU65_13610 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_13610 PF12002 MgsA AAA+ ATPase C terminal ISU65_13615 PF03548 Outer membrane lipoprotein carrier protein LolA ISU65_13620 PF17854 FtsK alpha domain ISU65_13620 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU65_13620 PF01580 FtsK/SpoIIIE family ISU65_13620 PF09397 Ftsk gamma domain ISU65_13625 PF01037 Lrp/AsnC ligand binding domain ISU65_13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_13635 PF00005 ABC transporter ISU65_13635 PF00664 ABC transporter transmembrane region ISU65_13640 PF00664 ABC transporter transmembrane region ISU65_13640 PF00005 ABC transporter ISU65_13645 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU65_13650 PF01176 Translation initiation factor 1A / IF-1 ISU65_13655 PF01797 Transposase IS200 like ISU65_13660 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_13660 PF07724 AAA domain (Cdc48 subfamily) ISU65_13660 PF02861 Clp amino terminal domain, pathogenicity island component ISU65_13660 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_13660 PF17871 AAA lid domain ISU65_13665 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU65_13670 PF00313 'Cold-shock' DNA-binding domain ISU65_13675 PF02687 FtsX-like permease family ISU65_13675 PF12704 MacB-like periplasmic core domain ISU65_13675 PF00005 ABC transporter ISU65_13680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_13685 PF04393 Protein of unknown function (DUF535) ISU65_13690 PF11398 Protein of unknown function (DUF2813) ISU65_13695 PF03956 Lysine exporter LysO ISU65_13700 PF03063 Prismane/CO dehydrogenase family ISU65_13705 PF00175 Oxidoreductase NAD-binding domain ISU65_13705 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU65_13705 PF00970 Oxidoreductase FAD-binding domain ISU65_13710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU65_13710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU65_13710 PF00205 Thiamine pyrophosphate enzyme, central domain ISU65_13720 PF01212 Beta-eliminating lyase ISU65_13725 PF11066 Protein of unknown function (DUF2867) ISU65_13725 PF13460 NAD(P)H-binding ISU65_13730 PF01370 NAD dependent epimerase/dehydratase family ISU65_13735 PF12883 Protein of unknown function (DUF3828) ISU65_13740 PF01817 Chorismate mutase type II ISU65_13745 PF00005 ABC transporter ISU65_13750 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_13755 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_13760 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_13770 PF00892 EamA-like transporter family ISU65_13775 PF10100 Staphylopine dehydrogenase ISU65_13780 PF03059 Nicotianamine synthase protein ISU65_13785 PF00005 ABC transporter ISU65_13790 PF01032 FecCD transport family ISU65_13795 PF01032 FecCD transport family ISU65_13820 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_13825 PF05958 tRNA (Uracil-5-)-methyltransferase ISU65_13830 PF10767 Protein of unknown function (DUF2593) ISU65_13835 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_13840 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_13845 PF08402 TOBE domain ISU65_13845 PF00005 ABC transporter ISU65_13850 PF13416 Bacterial extracellular solute-binding protein ISU65_13855 PF10722 Putative bacterial sensory transduction regulator ISU65_13860 PF07214 Protein of unknown function (DUF1418) ISU65_13865 PF00462 Glutaredoxin ISU65_13870 PF06826 Predicted Permease Membrane Region ISU65_13870 PF02080 TrkA-C domain ISU65_13880 PF01569 PAP2 superfamily ISU65_13885 PF01791 DeoC/LacD family aldolase ISU65_13890 PF08220 DeoR-like helix-turn-helix domain ISU65_13890 PF00455 DeoR C terminal sensor domain ISU65_13900 PF07943 Penicillin-binding protein 5, C-terminal domain ISU65_13900 PF00768 D-alanyl-D-alanine carboxypeptidase ISU65_13905 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_13910 PF09383 NIL domain ISU65_13910 PF00005 ABC transporter ISU65_13915 PF03180 NLPA lipoprotein ISU65_13930 PF00043 Glutathione S-transferase, C-terminal domain ISU65_13930 PF13417 Glutathione S-transferase, N-terminal domain ISU65_13935 PF00593 TonB dependent receptor ISU65_13935 PF07715 TonB-dependent Receptor Plug Domain ISU65_13940 PF00005 ABC transporter ISU65_13945 PF01032 FecCD transport family ISU65_13955 PF00324 Amino acid permease ISU65_13960 PF03466 LysR substrate binding domain ISU65_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_13965 PF03601 Conserved hypothetical protein 698 ISU65_13970 PF01261 Xylose isomerase-like TIM barrel ISU65_13975 PF00577 Outer membrane usher protein ISU65_13975 PF13954 PapC N-terminal domain ISU65_13975 PF13953 PapC C-terminal domain ISU65_13980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_13980 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_13990 PF17550 Family of unknown function ISU65_13995 PF00486 Transcriptional regulatory protein, C terminal ISU65_14000 PF02378 Phosphotransferase system, EIIC ISU65_14000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU65_14005 PF00294 pfkB family carbohydrate kinase ISU65_14010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU65_14010 PF00381 PTS HPr component phosphorylation site ISU65_14015 PF00293 NUDIX domain ISU65_14020 PF02653 Branched-chain amino acid transport system / permease component ISU65_14025 PF00005 ABC transporter ISU65_14035 PF01695 IstB-like ATP binding protein ISU65_14040 PF00665 Integrase core domain ISU65_14040 PF02796 Helix-turn-helix domain of resolvase ISU65_14050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU65_14055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_14055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_14060 PF00171 Aldehyde dehydrogenase family ISU65_14070 PF01842 ACT domain ISU65_14070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU65_14070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU65_14080 PF03692 Putative zinc- or iron-chelating domain ISU65_14085 PF03222 Tryptophan/tyrosine permease family ISU65_14090 PF08207 Elongation factor P (EF-P) KOW-like domain ISU65_14090 PF01132 Elongation factor P (EF-P) OB domain ISU65_14090 PF09285 Elongation factor P, C-terminal ISU65_14095 PF03786 D-mannonate dehydratase (UxuA) ISU65_14100 PF01232 Mannitol dehydrogenase Rossmann domain ISU65_14100 PF08125 Mannitol dehydrogenase C-terminal domain ISU65_14105 PF07729 FCD domain ISU65_14105 PF00392 Bacterial regulatory proteins, gntR family ISU65_14110 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU65_14110 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU65_14115 PF01569 PAP2 superfamily ISU65_14120 PF00877 NlpC/P60 family ISU65_14125 PF12792 CSS motif domain associated with EAL ISU65_14125 PF00563 EAL domain ISU65_14130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU65_14135 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_14140 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_14140 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU65_14145 PF00005 ABC transporter ISU65_14145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_14150 PF13989 YejG-like protein ISU65_14155 PF07690 Major Facilitator Superfamily ISU65_14160 PF00849 RNA pseudouridylate synthase ISU65_14160 PF01479 S4 domain ISU65_14165 PF04851 Type III restriction enzyme, res subunit ISU65_14165 PF00271 Helicase conserved C-terminal domain ISU65_14170 PF01386 Ribosomal L25p family ISU65_14175 PF01797 Transposase IS200 like ISU65_14180 PF04245 37-kD nucleoid-associated bacterial protein ISU65_14185 PF07208 Protein of unknown function (DUF1414) ISU65_14190 PF11893 Domain of unknown function (DUF3413) ISU65_14190 PF00884 Sulfatase ISU65_14205 PF05638 Type VI secretion system effector, Hcp ISU65_14225 PF00232 Glycosyl hydrolase family 1 ISU65_14230 PF01380 SIS domain ISU65_14230 PF01418 Helix-turn-helix domain, rpiR family ISU65_14235 PF07484 Phage Tail Collar Domain ISU65_14250 PF04865 Baseplate J-like protein ISU65_14290 PF17482 Phage tail sheath C-terminal domain ISU65_14290 PF04984 Phage tail sheath protein subtilisin-like domain ISU65_14310 PF01261 Xylose isomerase-like TIM barrel ISU65_14315 PF00455 DeoR C terminal sensor domain ISU65_14315 PF08220 DeoR-like helix-turn-helix domain ISU65_14325 PF07005 Sugar-binding N-terminal domain ISU65_14325 PF17042 Nucleotide-binding C-terminal domain ISU65_14330 PF06530 Phage antitermination protein Q ISU65_14335 PF01381 Helix-turn-helix ISU65_14335 PF00717 Peptidase S24-like ISU65_14340 PF06183 DinI-like family ISU65_14345 PF01278 Omptin family ISU65_14350 PF00672 HAMP domain ISU65_14350 PF02743 Cache domain ISU65_14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU65_14355 PF12706 Beta-lactamase superfamily domain ISU65_14365 PF00144 Beta-lactamase ISU65_14380 PF01797 Transposase IS200 like ISU65_14385 PF00267 Gram-negative porin ISU65_14390 PF07690 Major Facilitator Superfamily ISU65_14395 PF16359 RcsD-ABL domain ISU65_14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_14395 PF01627 Hpt domain ISU65_14400 PF16359 RcsD-ABL domain ISU65_14400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_14400 PF01627 Hpt domain ISU65_14405 PF00196 Bacterial regulatory proteins, luxR family ISU65_14405 PF00072 Response regulator receiver domain ISU65_14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_14410 PF00512 His Kinase A (phospho-acceptor) domain ISU65_14410 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU65_14410 PF00072 Response regulator receiver domain ISU65_14415 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU65_14415 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU65_14425 PF03477 ATP cone domain ISU65_14425 PF02867 Ribonucleotide reductase, barrel domain ISU65_14425 PF00317 Ribonucleotide reductase, all-alpha domain ISU65_14430 PF00268 Ribonucleotide reductase, small chain ISU65_14435 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU65_14440 PF03974 Ecotin ISU65_14445 PF00994 Probable molybdopterin binding domain ISU65_14450 PF03222 Tryptophan/tyrosine permease family ISU65_14455 PF07437 YfaZ precursor ISU65_14460 PF00199 Catalase ISU65_14460 PF06628 Catalase-related immune-responsive ISU65_14465 PF06733 DEAD_2 ISU65_14465 PF13307 Helicase C-terminal domain ISU65_14470 PF00267 Gram-negative porin ISU65_14475 PF00892 EamA-like transporter family ISU65_14485 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU65_14485 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU65_14485 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU65_14490 PF13520 Amino acid permease ISU65_14495 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_14500 PF00005 ABC transporter ISU65_14505 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_14515 PF00581 Rhodanese-like domain ISU65_14530 PF00005 ABC transporter ISU65_14535 PF00005 ABC transporter ISU65_14540 PF02653 Branched-chain amino acid transport system / permease component ISU65_14545 PF02653 Branched-chain amino acid transport system / permease component ISU65_14550 PF13188 PAS domain ISU65_14550 PF02954 Bacterial regulatory protein, Fis family ISU65_14550 PF00158 Sigma-54 interaction domain ISU65_14555 PF07308 Protein of unknown function (DUF1456) ISU65_14560 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_14565 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_14575 PF00005 ABC transporter ISU65_14580 PF04226 Transglycosylase associated protein ISU65_14590 PF01844 HNH endonuclease ISU65_14595 PF01928 CYTH domain ISU65_14600 PF09330 D-lactate dehydrogenase, membrane binding ISU65_14600 PF01565 FAD binding domain ISU65_14605 PF00768 D-alanyl-D-alanine carboxypeptidase ISU65_14615 PF01207 Dihydrouridine synthase (Dus) ISU65_14625 PF01797 Transposase IS200 like ISU65_14630 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU65_14635 PF02391 MoaE protein ISU65_14640 PF02597 ThiS family ISU65_14645 PF01967 MoaC family ISU65_14650 PF06463 Molybdenum Cofactor Synthesis C ISU65_14650 PF04055 Radical SAM superfamily ISU65_14655 PF01933 Uncharacterised protein family UPF0052 ISU65_14660 PF09905 DNA-binding protein VF530 ISU65_14665 PF02151 UvrB/uvrC motif ISU65_14665 PF17757 UvrB interaction domain ISU65_14665 PF00271 Helicase conserved C-terminal domain ISU65_14665 PF04851 Type III restriction enzyme, res subunit ISU65_14665 PF12344 Ultra-violet resistance protein B ISU65_14670 PF09383 NIL domain ISU65_14670 PF00005 ABC transporter ISU65_14680 PF08241 Methyltransferase domain ISU65_14685 PF00155 Aminotransferase class I and II ISU65_14690 PF04055 Radical SAM superfamily ISU65_14690 PF06968 Biotin and Thiamin Synthesis associated domain ISU65_14695 PF00202 Aminotransferase class-III ISU65_14700 PF10282 Lactonase, 7-bladed beta-propeller ISU65_14710 PF03459 TOBE domain ISU65_14710 PF00005 ABC transporter ISU65_14715 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_14725 PF10766 Multidrug efflux pump-associated protein AcrZ ISU65_14730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_14730 PF03459 TOBE domain ISU65_14735 PF00005 ABC transporter ISU65_14745 PF16363 GDP-mannose 4,6 dehydratase ISU65_14750 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU65_14750 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU65_14755 PF10509 Galactokinase galactose-binding signature ISU65_14755 PF00288 GHMP kinases N terminal domain ISU65_14755 PF08544 GHMP kinases C terminal ISU65_14765 PF01263 Aldose 1-epimerase ISU65_14775 PF00300 Histidine phosphatase superfamily (branch 1) ISU65_14780 PF00793 DAHP synthetase I family ISU65_14785 PF01545 Cation efflux family ISU65_14790 PF04973 Nicotinamide mononucleotide transporter ISU65_14795 PF02445 Quinolinate synthetase A protein ISU65_14815 PF13174 Tetratricopeptide repeat ISU65_14815 PF16331 TolA binding protein trimerisation ISU65_14820 PF00691 OmpA family ISU65_14825 PF07676 WD40-like Beta Propeller Repeat ISU65_14825 PF04052 TolB amino-terminal domain ISU65_14830 PF06519 TolA C-terminal ISU65_14830 PF06519 TolA C-terminal ISU65_14835 PF02472 Biopolymer transport protein ExbD/TolR ISU65_14840 PF01618 MotA/TolQ/ExbB proton channel family ISU65_14845 PF03061 Thioesterase superfamily ISU65_14850 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU65_14855 PF08173 Membrane bound YbgT-like protein ISU65_14860 PF02322 Cytochrome bd terminal oxidase subunit II ISU65_14865 PF01654 Cytochrome bd terminal oxidase subunit I ISU65_14870 PF00549 CoA-ligase ISU65_14870 PF02629 CoA binding domain ISU65_14875 PF00549 CoA-ligase ISU65_14875 PF08442 ATP-grasp domain ISU65_14880 PF00364 Biotin-requiring enzyme ISU65_14880 PF02817 e3 binding domain ISU65_14880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU65_14885 PF02779 Transketolase, pyrimidine binding domain ISU65_14885 PF16870 2-oxoglutarate dehydrogenase C-terminal ISU65_14885 PF00676 Dehydrogenase E1 component ISU65_14885 PF16078 2-oxoglutarate dehydrogenase N-terminus ISU65_14890 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU65_14895 PF02910 Fumarate reductase flavoprotein C-term ISU65_14895 PF00890 FAD binding domain ISU65_14900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU65_14905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU65_14910 PF00285 Citrate synthase, C-terminal domain ISU65_14915 PF01025 GrpE ISU65_14920 PF01513 ATP-NAD kinase ISU65_14925 PF02463 RecF/RecN/SMC N terminal domain ISU65_14930 PF04355 SmpA / OmlA family ISU65_14935 PF03658 RnfH family Ubiquitin ISU65_14940 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU65_14945 PF01668 SmpB protein ISU65_14955 PF01797 Transposase IS200 like ISU65_14960 PF13356 Arm DNA-binding domain ISU65_14960 PF00589 Phage integrase family ISU65_15010 PF05973 Phage derived protein Gp49-like (DUF891) ISU65_15020 PF00665 Integrase core domain ISU65_15020 PF02796 Helix-turn-helix domain of resolvase ISU65_15025 PF01695 IstB-like ATP binding protein ISU65_15035 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU65_15045 PF00929 Exonuclease ISU65_15050 PF00075 RNase H ISU65_15055 PF08241 Methyltransferase domain ISU65_15060 PF00753 Metallo-beta-lactamase superfamily ISU65_15060 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU65_15065 PF01464 Transglycosylase SLT domain ISU65_15065 PF01476 LysM domain ISU65_15070 PF03372 Endonuclease/Exonuclease/phosphatase family ISU65_15080 PF00248 Aldo/keto reductase family ISU65_15115 PF09383 NIL domain ISU65_15115 PF00005 ABC transporter ISU65_15120 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_15125 PF03180 NLPA lipoprotein ISU65_15130 PF16358 RcsF lipoprotein ISU65_15135 PF01980 tRNA-methyltransferase O ISU65_15135 PF18389 TrmO C-terminal domain ISU65_15140 PF03129 Anticodon binding domain ISU65_15140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU65_15140 PF04073 Aminoacyl-tRNA editing domain ISU65_15145 PF17185 NlpE C-terminal OB domain ISU65_15145 PF04170 NlpE N-terminal domain ISU65_15150 PF00472 RF-1 domain ISU65_15155 PF07152 YaeQ protein ISU65_15160 PF06786 Uncharacterised protein family (UPF0253) ISU65_15165 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU65_15170 PF00034 Cytochrome c ISU65_15175 PF11734 TilS substrate C-terminal domain ISU65_15175 PF01171 PP-loop family ISU65_15175 PF09179 TilS substrate binding domain ISU65_15180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU65_15185 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU65_15190 PF01336 OB-fold nucleic acid binding domain ISU65_15190 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU65_15190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU65_15190 PF02811 PHP domain ISU65_15190 PF14579 Helix-hairpin-helix motif ISU65_15195 PF01351 Ribonuclease HII ISU65_15200 PF02684 Lipid-A-disaccharide synthetase ISU65_15205 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU65_15205 PF00132 Bacterial transferase hexapeptide (six repeats) ISU65_15210 PF07977 FabA-like domain ISU65_15215 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU65_15215 PF00132 Bacterial transferase hexapeptide (six repeats) ISU65_15220 PF03938 Outer membrane protein (OmpH-like) ISU65_15225 PF07244 Surface antigen variable number repeat ISU65_15225 PF01103 Surface antigen ISU65_15230 PF02163 Peptidase family M50 ISU65_15230 PF17820 PDZ domain ISU65_15240 PF01255 Putative undecaprenyl diphosphate synthase ISU65_15245 PF13288 DXP reductoisomerase C-terminal domain ISU65_15245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU65_15245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU65_15250 PF01765 Ribosome recycling factor ISU65_15255 PF00696 Amino acid kinase family ISU65_15260 PF00889 Elongation factor TS ISU65_15265 PF00318 Ribosomal protein S2 ISU65_15270 PF00557 Metallopeptidase family M24 ISU65_15275 PF01842 ACT domain ISU65_15275 PF08335 GlnD PII-uridylyltransferase ISU65_15275 PF01909 Nucleotidyltransferase domain ISU65_15275 PF01966 HD domain ISU65_15280 PF00132 Bacterial transferase hexapeptide (six repeats) ISU65_15280 PF14602 Hexapeptide repeat of succinyl-transferase ISU65_15280 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU65_15285 PF11944 Protein of unknown function (DUF3461) ISU65_15290 PF00258 Flavodoxin ISU65_15295 PF00849 RNA pseudouridylate synthase ISU65_15300 PF04287 tRNA pseudouridine synthase C ISU65_15305 PF01797 Transposase IS200 like ISU65_15310 PF07348 Syd protein (SUKH-2) ISU65_15315 PF14489 QueF-like protein ISU65_15315 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU65_15320 PF11892 Domain of unknown function (DUF3412) ISU65_15320 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU65_15320 PF03641 Possible lysine decarboxylase ISU65_15325 PF00665 Integrase core domain ISU65_15325 PF02796 Helix-turn-helix domain of resolvase ISU65_15330 PF01695 IstB-like ATP binding protein ISU65_15350 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU65_15355 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU65_15445 PF03551 Transcriptional regulator PadR-like family ISU65_15450 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU65_15460 PF13407 Periplasmic binding protein domain ISU65_15465 PF02653 Branched-chain amino acid transport system / permease component ISU65_15470 PF00005 ABC transporter ISU65_15475 PF00005 ABC transporter ISU65_15475 PF17912 MalK OB fold domain ISU65_15480 PF13416 Bacterial extracellular solute-binding protein ISU65_15485 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_15490 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_15495 PF07745 Glycosyl hydrolase family 53 ISU65_15500 PF08532 Beta-galactosidase trimerisation domain ISU65_15500 PF02449 Beta-galactosidase ISU65_15500 PF08533 Beta-galactosidase C-terminal domain ISU65_15505 PF02378 Phosphotransferase system, EIIC ISU65_15505 PF00367 phosphotransferase system, EIIB ISU65_15510 PF02264 LamB porin ISU65_15515 PF00356 Bacterial regulatory proteins, lacI family ISU65_15520 PF01055 Glycosyl hydrolases family 31 ISU65_15520 PF17137 Domain of unknown function (DUF5110) ISU65_15520 PF13802 Galactose mutarotase-like ISU65_15520 PF16338 Domain of unknown function (DUF4968) ISU65_15525 PF07690 Major Facilitator Superfamily ISU65_15530 PF00356 Bacterial regulatory proteins, lacI family ISU65_15540 PF01116 Fructose-bisphosphate aldolase class-II ISU65_15550 PF00884 Sulfatase ISU65_15555 PF04055 Radical SAM superfamily ISU65_15555 PF13186 Iron-sulfur cluster-binding domain ISU65_15560 PF07470 Glycosyl Hydrolase Family 88 ISU65_15570 PF01979 Amidohydrolase family ISU65_15575 PF03610 PTS system fructose IIA component ISU65_15580 PF03613 PTS system mannose/fructose/sorbose family IID component ISU65_15585 PF03609 PTS system sorbose-specific iic component ISU65_15590 PF03830 PTS system sorbose subfamily IIB component ISU65_15595 PF01380 SIS domain ISU65_15600 PF08013 Tagatose 6 phosphate kinase ISU65_15605 PF00455 DeoR C terminal sensor domain ISU65_15605 PF08220 DeoR-like helix-turn-helix domain ISU65_15610 PF00884 Sulfatase ISU65_15615 PF01797 Transposase IS200 like ISU65_15620 PF02796 Helix-turn-helix domain of resolvase ISU65_15620 PF00665 Integrase core domain ISU65_15625 PF01695 IstB-like ATP binding protein ISU65_15630 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU65_15630 PF09092 Lyase, N terminal ISU65_15630 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU65_15630 PF09093 Lyase, catalytic ISU65_15650 PF00484 Carbonic anhydrase ISU65_15665 PF00263 Bacterial type II and III secretion system protein ISU65_15665 PF03958 Bacterial type II/III secretion system short domain ISU65_15670 PF00437 Type II/IV secretion system protein ISU65_15680 PF07963 Prokaryotic N-terminal methylation motif ISU65_15680 PF08334 Type II secretion system (T2SS), protein G ISU65_15690 PF07963 Prokaryotic N-terminal methylation motif ISU65_15690 PF02501 Type II secretion system (T2SS), protein I ISU65_15695 PF11612 Type II secretion system (T2SS), protein J ISU65_15695 PF07963 Prokaryotic N-terminal methylation motif ISU65_15715 PF06750 Bacterial Peptidase A24 N-terminal domain ISU65_15715 PF01478 Type IV leader peptidase family ISU65_15735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU65_15735 PF00672 HAMP domain ISU65_15735 PF02203 Tar ligand binding domain homologue ISU65_15750 PF03466 LysR substrate binding domain ISU65_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_15755 PF07690 Major Facilitator Superfamily ISU65_15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_15760 PF03466 LysR substrate binding domain ISU65_15765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU65_15765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU65_15770 PF00356 Bacterial regulatory proteins, lacI family ISU65_15775 PF00384 Molybdopterin oxidoreductase ISU65_15775 PF01568 Molydopterin dinucleotide binding domain ISU65_15780 PF01553 Acyltransferase ISU65_15780 PF00501 AMP-binding enzyme ISU65_15780 PF13193 AMP-binding enzyme C-terminal domain ISU65_15785 PF07690 Major Facilitator Superfamily ISU65_15800 PF00248 Aldo/keto reductase family ISU65_15805 PF02976 DNA mismatch repair enzyme MutH ISU65_15810 PF00293 NUDIX domain ISU65_15815 PF05524 PEP-utilising enzyme, N-terminal ISU65_15815 PF02896 PEP-utilising enzyme, TIM barrel domain ISU65_15815 PF00391 PEP-utilising enzyme, mobile domain ISU65_15815 PF01590 GAF domain ISU65_15820 PF01790 Prolipoprotein diacylglyceryl transferase ISU65_15825 PF00303 Thymidylate synthase ISU65_15850 PF17946 RecC C-terminal domain ISU65_15855 PF00675 Insulinase (Peptidase family M16) ISU65_15855 PF05193 Peptidase M16 inactive domain ISU65_15855 PF16187 Middle or third domain of peptidase_M16 ISU65_15860 PF00580 UvrD/REP helicase N-terminal domain ISU65_15860 PF12705 PD-(D/E)XK nuclease superfamily ISU65_15860 PF13361 UvrD-like helicase C-terminal domain ISU65_15865 PF13538 UvrD-like helicase C-terminal domain ISU65_15870 PF00583 Acetyltransferase (GNAT) family ISU65_15870 PF00696 Amino acid kinase family ISU65_15875 PF01520 N-acetylmuramoyl-L-alanine amidase ISU65_15875 PF11741 AMIN domain ISU65_15890 PF06725 3D domain ISU65_15890 PF03562 MltA specific insert domain ISU65_15895 PF00899 ThiF family ISU65_15900 PF02657 Fe-S metabolism associated domain ISU65_15905 PF00266 Aminotransferase class-V ISU65_15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_15915 PF03466 LysR substrate binding domain ISU65_15920 PF04241 Protein of unknown function (DUF423) ISU65_15925 PF01728 FtsJ-like methyltransferase ISU65_15925 PF18125 RlmM ferredoxin-like domain ISU65_15930 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU65_15930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU65_15935 PF01695 IstB-like ATP binding protein ISU65_15940 PF02796 Helix-turn-helix domain of resolvase ISU65_15940 PF00665 Integrase core domain ISU65_15950 PF07715 TonB-dependent Receptor Plug Domain ISU65_15950 PF00593 TonB dependent receptor ISU65_15955 PF07687 Peptidase dimerisation domain ISU65_15955 PF01546 Peptidase family M20/M25/M40 ISU65_15960 PF03806 AbgT putative transporter family ISU65_15965 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU65_15965 PF12468 Type III secretion system leucine rich repeat protein ISU65_15970 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU65_15970 PF12468 Type III secretion system leucine rich repeat protein ISU65_15970 PF12468 Type III secretion system leucine rich repeat protein ISU65_15970 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU65_15980 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU65_15980 PF12468 Type III secretion system leucine rich repeat protein ISU65_15985 PF03797 Autotransporter beta-domain ISU65_15995 PF07906 ShET2 enterotoxin, N-terminal region ISU65_16000 PF00873 AcrB/AcrD/AcrF family ISU65_16005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_16005 PF00529 HlyD membrane-fusion protein of T1SS ISU65_16015 PF08447 PAS fold ISU65_16015 PF00563 EAL domain ISU65_16015 PF08448 PAS fold ISU65_16015 PF00990 Diguanylate cyclase, GGDEF domain ISU65_16030 PF00593 TonB dependent receptor ISU65_16030 PF07715 TonB-dependent Receptor Plug Domain ISU65_16035 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU65_16040 PF06276 Ferric iron reductase FhuF-like transporter ISU65_16040 PF04183 IucA / IucC family ISU65_16075 PF03472 Autoinducer binding domain ISU65_16075 PF00196 Bacterial regulatory proteins, luxR family ISU65_16080 PF00765 Autoinducer synthase ISU65_16085 PF02517 CPBP intramembrane metalloprotease ISU65_16110 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU65_16125 PF00691 OmpA family ISU65_16125 PF05736 OprF membrane domain ISU65_16135 PF07724 AAA domain (Cdc48 subfamily) ISU65_16135 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_16135 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_16135 PF17871 AAA lid domain ISU65_16140 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU65_16140 PF04717 Type VI secretion system, phage-baseplate injector ISU65_16140 PF13296 Putative type VI secretion system Rhs element Vgr ISU65_16200 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU65_16200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU65_16200 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU65_16205 PF13407 Periplasmic binding protein domain ISU65_16210 PF00005 ABC transporter ISU65_16215 PF02653 Branched-chain amino acid transport system / permease component ISU65_16220 PF07715 TonB-dependent Receptor Plug Domain ISU65_16230 PF01464 Transglycosylase SLT domain ISU65_16230 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU65_16235 PF04362 Bacterial Fe(2+) trafficking ISU65_16240 PF10576 Iron-sulfur binding domain of endonuclease III ISU65_16240 PF14815 NUDIX domain ISU65_16240 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU65_16240 PF00633 Helix-hairpin-helix motif ISU65_16245 PF02390 Putative methyltransferase ISU65_16250 PF04320 Protein with unknown function (DUF469) ISU65_16255 PF04960 Glutaminase ISU65_16260 PF11101 Protein of unknown function (DUF2884) ISU65_16265 PF11101 Protein of unknown function (DUF2884) ISU65_16270 PF11713 Peptidase C80 family ISU65_16270 PF11647 Membrane Localization Domain ISU65_16270 PF12146 Serine aminopeptidase, S33 ISU65_16270 PF16671 Actin cross-linking domain ISU65_16270 PF07634 RtxA repeat ISU65_16275 PF04055 Radical SAM superfamily ISU65_16275 PF06969 HemN C-terminal domain ISU65_16280 PF01725 Ham1 family ISU65_16285 PF02594 Uncharacterised ACR, YggU family COG1872 ISU65_16290 PF02325 YGGT family ISU65_16295 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU65_16295 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU65_16300 PF01168 Alanine racemase, N-terminal domain ISU65_16305 PF00437 Type II/IV secretion system protein ISU65_16310 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU65_16315 PF00795 Carbon-nitrogen hydrolase ISU65_16320 PF03652 Holliday junction resolvase ISU65_16325 PF02622 Uncharacterized ACR, COG1678 ISU65_16330 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU65_16330 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU65_16335 PF04452 RNA methyltransferase ISU65_16340 PF04231 Endonuclease I ISU65_16345 PF17283 SprT-like zinc ribbon domain ISU65_16345 PF10263 SprT-like family ISU65_16350 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU65_16350 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU65_16350 PF02772 S-adenosylmethionine synthetase, central domain ISU65_16355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU65_16355 PF17944 Arginine decarboxylase C-terminal helical extension ISU65_16355 PF17810 Arginine decarboxylase helical bundle domain ISU65_16360 PF00355 Rieske [2Fe-2S] domain ISU65_16370 PF01435 Peptidase family M48 ISU65_16375 PF02779 Transketolase, pyrimidine binding domain ISU65_16375 PF02780 Transketolase, C-terminal domain ISU65_16375 PF00456 Transketolase, thiamine diphosphate binding domain ISU65_16380 PF01797 Transposase IS200 like ISU65_16385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU65_16385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU65_16390 PF00162 Phosphoglycerate kinase ISU65_16395 PF01116 Fructose-bisphosphate aldolase class-II ISU65_16405 PF05552 Conserved TM helix ISU65_16405 PF00924 Mechanosensitive ion channel ISU65_16410 PF01810 LysE type translocator ISU65_16415 PF04402 Protein of unknown function (DUF541) ISU65_16420 PF03466 LysR substrate binding domain ISU65_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_16425 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU65_16430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU65_16430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU65_16430 PF01842 ACT domain ISU65_16440 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU65_16450 PF05164 Cell division protein ZapA ISU65_16455 PF03695 Uncharacterised protein family (UPF0149) ISU65_16460 PF00557 Metallopeptidase family M24 ISU65_16460 PF05195 Aminopeptidase P, N-terminal domain ISU65_16465 PF01494 FAD binding domain ISU65_16470 PF01494 FAD binding domain ISU65_16475 PF01571 Aminomethyltransferase folate-binding domain ISU65_16475 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU65_16480 PF01597 Glycine cleavage H-protein ISU65_16485 PF02347 Glycine cleavage system P-protein ISU65_16515 PF03006 Haemolysin-III related ISU65_16525 PF01571 Aminomethyltransferase folate-binding domain ISU65_16530 PF03937 Flavinator of succinate dehydrogenase ISU65_16535 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU65_16540 PF00072 Response regulator receiver domain ISU65_16540 PF00486 Transcriptional regulatory protein, C terminal ISU65_16545 PF00512 His Kinase A (phospho-acceptor) domain ISU65_16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_16545 PF00672 HAMP domain ISU65_16550 PF06123 Inner membrane protein CreD ISU65_16555 PF00258 Flavodoxin ISU65_16560 PF00589 Phage integrase family ISU65_16560 PF02899 Phage integrase, N-terminal SAM-like domain ISU65_16565 PF13098 Thioredoxin-like domain ISU65_16565 PF10411 Disulfide bond isomerase protein N-terminus ISU65_16570 PF02272 DHHA1 domain ISU65_16570 PF01368 DHH family ISU65_16570 PF17768 RecJ OB domain ISU65_16580 PF01336 OB-fold nucleic acid binding domain ISU65_16580 PF00152 tRNA synthetases class II (D, K and N) ISU65_16590 PF14659 Phage integrase, N-terminal SAM-like domain ISU65_16590 PF13356 Arm DNA-binding domain ISU65_16590 PF00589 Phage integrase family ISU65_16595 PF02796 Helix-turn-helix domain of resolvase ISU65_16595 PF00665 Integrase core domain ISU65_16600 PF01695 IstB-like ATP binding protein ISU65_16605 PF01119 DNA mismatch repair protein, C-terminal domain ISU65_16605 PF08676 MutL C terminal dimerisation domain ISU65_16615 PF00589 Phage integrase family ISU65_16615 PF13356 Arm DNA-binding domain ISU65_16625 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU65_16630 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU65_16635 PF00883 Cytosol aminopeptidase family, catalytic domain ISU65_16635 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU65_16640 PF04364 DNA polymerase III chi subunit, HolC ISU65_16645 PF08264 Anticodon-binding domain of tRNA ISU65_16645 PF10458 Valyl tRNA synthetase tRNA binding arm ISU65_16645 PF00133 tRNA synthetases class I (I, L, M and V) ISU65_16650 PF00583 Acetyltransferase (GNAT) family ISU65_16655 PF06877 Regulator of ribonuclease activity B ISU65_16660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU65_16660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU65_16665 PF04074 YhcH/YjgK/YiaL ISU65_16675 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_16680 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_16680 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU65_16685 PF00005 ABC transporter ISU65_16685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_16690 PF00005 ABC transporter ISU65_16690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU65_16695 PF03477 ATP cone domain ISU65_16695 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU65_16705 PF00392 Bacterial regulatory proteins, gntR family ISU65_16705 PF07702 UTRA domain ISU65_16710 PF06754 Phosphonate metabolism protein PhnG ISU65_16715 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU65_16720 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU65_16725 PF06007 Phosphonate metabolism protein PhnJ ISU65_16730 PF00005 ABC transporter ISU65_16735 PF00005 ABC transporter ISU65_16740 PF07969 Amidohydrolase family ISU65_16750 PF12706 Beta-lactamase superfamily domain ISU65_16755 PF13460 NAD(P)H-binding ISU65_16770 PF00005 ABC transporter ISU65_16770 PF17912 MalK OB fold domain ISU65_16770 PF03459 TOBE domain ISU65_16775 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_16780 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_16785 PF13416 Bacterial extracellular solute-binding protein ISU65_16805 PF13508 Acetyltransferase (GNAT) domain ISU65_16810 PF02036 SCP-2 sterol transfer family ISU65_16815 PF01136 Peptidase family U32 ISU65_16820 PF01136 Peptidase family U32 ISU65_16825 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU65_16825 PF02321 Outer membrane efflux protein ISU65_16830 PF00873 AcrB/AcrD/AcrF family ISU65_16835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_16835 PF00529 HlyD membrane-fusion protein of T1SS ISU65_16840 PF00296 Luciferase-like monooxygenase ISU65_16850 PF01381 Helix-turn-helix ISU65_16860 PF00270 DEAD/DEAH box helicase ISU65_16860 PF03880 DbpA RNA binding domain ISU65_16860 PF00271 Helicase conserved C-terminal domain ISU65_16860 PF12343 Cold shock protein DEAD box A ISU65_16870 PF07719 Tetratricopeptide repeat ISU65_16870 PF13181 Tetratricopeptide repeat ISU65_16875 PF01138 3' exoribonuclease family, domain 1 ISU65_16875 PF00575 S1 RNA binding domain ISU65_16875 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU65_16875 PF03725 3' exoribonuclease family, domain 2 ISU65_16875 PF00013 KH domain ISU65_16885 PF00312 Ribosomal protein S15 ISU65_16890 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU65_16890 PF09157 Pseudouridine synthase II TruB, C-terminal ISU65_16890 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU65_16895 PF02033 Ribosome-binding factor A ISU65_16900 PF03144 Elongation factor Tu domain 2 ISU65_16900 PF08364 Bacterial translation initiation factor IF-2 associated region ISU65_16900 PF04760 Translation initiation factor IF-2, N-terminal region ISU65_16900 PF00009 Elongation factor Tu GTP binding domain ISU65_16900 PF11987 Translation-initiation factor 2 ISU65_16905 PF13184 NusA-like KH domain ISU65_16905 PF08529 NusA N-terminal domain ISU65_16905 PF00575 S1 RNA binding domain ISU65_16910 PF02576 RimP N-terminal domain ISU65_16910 PF17384 RimP C-terminal SH3 domain ISU65_16925 PF03840 Preprotein translocase SecG subunit ISU65_16930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU65_16930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU65_16930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU65_16930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU65_16935 PF00809 Pterin binding enzyme ISU65_16940 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_16940 PF06480 FtsH Extracellular ISU65_16940 PF01434 Peptidase family M41 ISU65_16940 PF17862 AAA+ lid domain ISU65_16945 PF01728 FtsJ-like methyltransferase ISU65_16950 PF01985 CRS1 / YhbY (CRM) domain ISU65_16955 PF03449 Transcription elongation factor, N-terminal ISU65_16955 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU65_16960 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU65_16965 PF00072 Response regulator receiver domain ISU65_16965 PF00486 Transcriptional regulatory protein, C terminal ISU65_16970 PF00672 HAMP domain ISU65_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_16970 PF00512 His Kinase A (phospho-acceptor) domain ISU65_16975 PF01018 GTP1/OBG ISU65_16975 PF01926 50S ribosome-binding GTPase ISU65_16980 PF00892 EamA-like transporter family ISU65_16985 PF01016 Ribosomal L27 protein ISU65_16990 PF00829 Ribosomal prokaryotic L21 protein ISU65_16995 PF00348 Polyprenyl synthetase ISU65_17005 PF13693 Winged helix-turn-helix DNA-binding ISU65_17010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU65_17010 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU65_17015 PF02863 Arginine repressor, C-terminal domain ISU65_17015 PF01316 Arginine repressor, DNA binding domain ISU65_17025 PF01225 Mur ligase family, catalytic domain ISU65_17025 PF08245 Mur ligase middle domain ISU65_17025 PF02875 Mur ligase family, glutamate ligase domain ISU65_17030 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU65_17035 PF00719 Inorganic pyrophosphatase ISU65_17040 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU65_17045 PF04357 TamB, inner membrane protein subunit of TAM complex ISU65_17050 PF17243 POTRA domain TamA domain 1 ISU65_17050 PF07244 Surface antigen variable number repeat ISU65_17050 PF01103 Surface antigen ISU65_17055 PF01625 Peptide methionine sulfoxide reductase ISU65_17060 PF03471 Transporter associated domain ISU65_17060 PF00571 CBS domain ISU65_17060 PF01595 Cyclin M transmembrane N-terminal domain ISU65_17065 PF06526 Protein of unknown function (DUF1107) ISU65_17070 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU65_17075 PF00459 Inositol monophosphatase family ISU65_17080 PF00149 Calcineurin-like phosphoesterase ISU65_17080 PF02872 5'-nucleotidase, C-terminal domain ISU65_17085 PF01814 Hemerythrin HHE cation binding domain ISU65_17085 PF04405 Domain of Unknown function (DUF542) ISU65_17090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU65_17090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU65_17095 PF04225 Opacity-associated protein A LysM-like domain ISU65_17095 PF08525 Opacity-associated protein A N-terminal motif ISU65_17105 PF01797 Transposase IS200 like ISU65_17110 PF01281 Ribosomal protein L9, N-terminal domain ISU65_17110 PF03948 Ribosomal protein L9, C-terminal domain ISU65_17115 PF01084 Ribosomal protein S18 ISU65_17120 PF00436 Single-strand binding protein family ISU65_17125 PF01250 Ribosomal protein S6 ISU65_17130 PF00326 Prolyl oligopeptidase family ISU65_17135 PF00665 Integrase core domain ISU65_17135 PF02796 Helix-turn-helix domain of resolvase ISU65_17140 PF01695 IstB-like ATP binding protein ISU65_17150 PF07338 Protein of unknown function (DUF1471) ISU65_17155 PF18158 Adaptive response protein AidB N-terminal domain ISU65_17155 PF02770 Acyl-CoA dehydrogenase, middle domain ISU65_17155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU65_17160 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU65_17160 PF00588 SpoU rRNA Methylase family ISU65_17165 PF17876 Cold shock domain ISU65_17165 PF08461 Ribonuclease R winged-helix domain ISU65_17165 PF08206 Ribonuclease B OB domain ISU65_17165 PF00773 RNB domain ISU65_17165 PF00575 S1 RNA binding domain ISU65_17170 PF02082 Transcriptional regulator ISU65_17175 PF00709 Adenylosuccinate synthetase ISU65_17180 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU65_17185 PF01145 SPFH domain / Band 7 family ISU65_17190 PF01145 SPFH domain / Band 7 family ISU65_17190 PF12221 Bacterial membrane protein N terminal ISU65_17195 PF01926 50S ribosome-binding GTPase ISU65_17195 PF16360 GTP-binding GTPase Middle Region ISU65_17195 PF13167 GTP-binding GTPase N-terminal ISU65_17200 PF17209 Hfq protein ISU65_17210 PF01119 DNA mismatch repair protein, C-terminal domain ISU65_17210 PF08676 MutL C terminal dimerisation domain ISU65_17215 PF01520 N-acetylmuramoyl-L-alanine amidase ISU65_17220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU65_17225 PF03853 YjeF-related protein N-terminus ISU65_17225 PF01256 Carbohydrate kinase ISU65_17230 PF08331 Domain of unknown function (DUF1730) ISU65_17245 PF00929 Exonuclease ISU65_17250 PF03193 RsgA GTPase ISU65_17255 PF02666 Phosphatidylserine decarboxylase ISU65_17260 PF00924 Mechanosensitive ion channel ISU65_17260 PF12795 Mechanosensitive ion channel porin domain ISU65_17260 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU65_17265 PF00152 tRNA synthetases class II (D, K and N) ISU65_17275 PF00890 FAD binding domain ISU65_17275 PF02910 Fumarate reductase flavoprotein C-term ISU65_17280 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU65_17280 PF13183 4Fe-4S dicluster domain ISU65_17285 PF02300 Fumarate reductase subunit C ISU65_17290 PF02313 Fumarate reductase subunit D ISU65_17295 PF00893 Small Multidrug Resistance protein ISU65_17300 PF01132 Elongation factor P (EF-P) OB domain ISU65_17300 PF08207 Elongation factor P (EF-P) KOW-like domain ISU65_17300 PF09285 Elongation factor P, C-terminal ISU65_17305 PF04055 Radical SAM superfamily ISU65_17310 PF13698 Domain of unknown function (DUF4156) ISU65_17315 PF00118 TCP-1/cpn60 chaperonin family ISU65_17320 PF00166 Chaperonin 10 Kd subunit ISU65_17325 PF04186 FxsA cytoplasmic membrane protein ISU65_17330 PF10415 Fumarase C C-terminus ISU65_17330 PF00206 Lyase ISU65_17335 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU65_17340 PF03091 CutA1 divalent ion tolerance protein ISU65_17345 PF11412 Disulphide bond corrector protein DsbC ISU65_17345 PF02683 Cytochrome C biogenesis protein transmembrane region ISU65_17350 PF01568 Molydopterin dinucleotide binding domain ISU65_17350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU65_17350 PF00384 Molybdopterin oxidoreductase ISU65_17355 PF12800 4Fe-4S binding domain ISU65_17355 PF13247 4Fe-4S dicluster domain ISU65_17360 PF13247 4Fe-4S dicluster domain ISU65_17360 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_17360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU65_17390 PF06379 L-rhamnose-proton symport protein (RhaT) ISU65_17395 PF12833 Helix-turn-helix domain ISU65_17395 PF02311 AraC-like ligand binding domain ISU65_17400 PF12833 Helix-turn-helix domain ISU65_17400 PF02311 AraC-like ligand binding domain ISU65_17410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_17410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_17415 PF06134 L-rhamnose isomerase (RhaA) ISU65_17420 PF00596 Class II Aldolase and Adducin N-terminal domain ISU65_17425 PF00465 Iron-containing alcohol dehydrogenase ISU65_17430 PF05336 L-rhamnose mutarotase ISU65_17435 PF00436 Single-strand binding protein family ISU65_17440 PF00005 ABC transporter ISU65_17440 PF17760 UvrA interaction domain ISU65_17440 PF17755 UvrA DNA-binding domain ISU65_17445 PF04237 YjbR ISU65_17450 PF00155 Aminotransferase class I and II ISU65_17455 PF01168 Alanine racemase, N-terminal domain ISU65_17455 PF00842 Alanine racemase, C-terminal domain ISU65_17460 PF03796 DnaB-like helicase C terminal domain ISU65_17460 PF00772 DnaB-like helicase N terminal domain ISU65_17465 PF00107 Zinc-binding dehydrogenase ISU65_17465 PF08240 Alcohol dehydrogenase GroES-like domain ISU65_17470 PF09583 Phage shock protein G (Phageshock_PspG) ISU65_17475 PF01207 Dihydrouridine synthase (Dus) ISU65_17480 PF01475 Ferric uptake regulator family ISU65_17485 PF01726 LexA DNA binding domain ISU65_17485 PF00717 Peptidase S24-like ISU65_17490 PF01219 Prokaryotic diacylglycerol kinase ISU65_17495 PF01553 Acyltransferase ISU65_17500 PF01040 UbiA prenyltransferase family ISU65_17505 PF04345 Chorismate lyase ISU65_17510 PF12951 Passenger-associated-transport-repeat ISU65_17515 PF08031 Berberine and berberine like ISU65_17515 PF01565 FAD binding domain ISU65_17530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_17535 PF13953 PapC C-terminal domain ISU65_17535 PF13954 PapC N-terminal domain ISU65_17535 PF00577 Outer membrane usher protein ISU65_17545 PF02342 TerD domain ISU65_17550 PF02342 TerD domain ISU65_17555 PF03741 Integral membrane protein TerC family ISU65_17560 PF05099 Tellurite resistance protein TerB ISU65_17565 PF02342 TerD domain ISU65_17570 PF02342 TerD domain ISU65_17590 PF11202 Phosphoribosyl transferase (PRTase) ISU65_17590 PF15608 PELOTA RNA binding domain ISU65_17610 PF04055 Radical SAM superfamily ISU65_17615 PF06228 Haem utilisation ChuX/HutX ISU65_17620 PF13460 NAD(P)H-binding ISU65_17630 PF07715 TonB-dependent Receptor Plug Domain ISU65_17630 PF00593 TonB dependent receptor ISU65_17635 PF05171 Haemin-degrading HemS.ChuX domain ISU65_17640 PF01497 Periplasmic binding protein ISU65_17645 PF01032 FecCD transport family ISU65_17650 PF00005 ABC transporter ISU65_17655 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU65_17660 PF03222 Tryptophan/tyrosine permease family ISU65_17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_17665 PF03466 LysR substrate binding domain ISU65_17670 PF01206 Sulfurtransferase TusA ISU65_17675 PF04143 Sulphur transport ISU65_17680 PF01312 FlhB HrpN YscU SpaS Family ISU65_17685 PF01311 Bacterial export proteins, family 1 ISU65_17690 PF01313 Bacterial export proteins, family 3 ISU65_17695 PF00813 FliP family ISU65_17700 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU65_17715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU65_17715 PF18269 T3SS EscN ATPase C-terminal domain ISU65_17720 PF00771 FHIPEP family ISU65_17770 PF00263 Bacterial type II and III secretion system protein ISU65_17770 PF03958 Bacterial type II/III secretion system short domain ISU65_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_17775 PF00512 His Kinase A (phospho-acceptor) domain ISU65_17775 PF00072 Response regulator receiver domain ISU65_17775 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU65_17775 PF01627 Hpt domain ISU65_17775 PF00672 HAMP domain ISU65_17780 PF00072 Response regulator receiver domain ISU65_17780 PF00196 Bacterial regulatory proteins, luxR family ISU65_17785 PF00375 Sodium:dicarboxylate symporter family ISU65_17790 PF13193 AMP-binding enzyme C-terminal domain ISU65_17790 PF00501 AMP-binding enzyme ISU65_17790 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU65_17795 PF04341 Protein of unknown function, DUF485 ISU65_17800 PF00474 Sodium:solute symporter family ISU65_17810 PF02796 Helix-turn-helix domain of resolvase ISU65_17810 PF00665 Integrase core domain ISU65_17815 PF01695 IstB-like ATP binding protein ISU65_17850 PF02142 MGS-like domain ISU65_17850 PF01808 AICARFT/IMPCHase bienzyme ISU65_17855 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU65_17855 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU65_17855 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU65_17860 PF07356 Protein of unknown function (DUF1481) ISU65_17865 PF00216 Bacterial DNA-binding protein ISU65_17870 PF04222 Protein of unknown function (DUF416) ISU65_17875 PF04493 Endonuclease V ISU65_17880 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU65_17890 PF00293 NUDIX domain ISU65_17890 PF09297 NADH pyrophosphatase zinc ribbon domain ISU65_17895 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU65_17900 PF01964 Radical SAM ThiC family ISU65_17900 PF13667 ThiC-associated domain ISU65_17905 PF02581 Thiamine monophosphate synthase ISU65_17910 PF00899 ThiF family ISU65_17920 PF05690 Thiazole biosynthesis protein ThiG ISU65_17925 PF04055 Radical SAM superfamily ISU65_17925 PF06968 Biotin and Thiamin Synthesis associated domain ISU65_17930 PF01797 Transposase IS200 like ISU65_17935 PF04998 RNA polymerase Rpb1, domain 5 ISU65_17935 PF04983 RNA polymerase Rpb1, domain 3 ISU65_17935 PF05000 RNA polymerase Rpb1, domain 4 ISU65_17935 PF00623 RNA polymerase Rpb1, domain 2 ISU65_17935 PF04997 RNA polymerase Rpb1, domain 1 ISU65_17940 PF04560 RNA polymerase Rpb2, domain 7 ISU65_17940 PF04563 RNA polymerase beta subunit ISU65_17940 PF00562 RNA polymerase Rpb2, domain 6 ISU65_17940 PF10385 RNA polymerase beta subunit external 1 domain ISU65_17940 PF04561 RNA polymerase Rpb2, domain 2 ISU65_17940 PF04565 RNA polymerase Rpb2, domain 3 ISU65_17945 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU65_17945 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU65_17950 PF00466 Ribosomal protein L10 ISU65_17955 PF00687 Ribosomal protein L1p/L10e family ISU65_17960 PF00298 Ribosomal protein L11, RNA binding domain ISU65_17960 PF03946 Ribosomal protein L11, N-terminal domain ISU65_17965 PF02357 Transcription termination factor nusG ISU65_17965 PF00467 KOW motif ISU65_17970 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU65_17975 PF03143 Elongation factor Tu C-terminal domain ISU65_17975 PF03144 Elongation factor Tu domain 2 ISU65_17975 PF00009 Elongation factor Tu GTP binding domain ISU65_18000 PF01695 IstB-like ATP binding protein ISU65_18005 PF02796 Helix-turn-helix domain of resolvase ISU65_18005 PF00665 Integrase core domain ISU65_18010 PF13673 Acetyltransferase (GNAT) domain ISU65_18015 PF00485 Phosphoribulokinase / Uridine kinase family ISU65_18020 PF02237 Biotin protein ligase C terminal domain ISU65_18020 PF03099 Biotin/lipoate A/B protein ligase family ISU65_18020 PF08279 HTH domain ISU65_18025 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU65_18025 PF01565 FAD binding domain ISU65_18055 PF12724 Flavodoxin domain ISU65_18060 PF02386 Cation transport protein ISU65_18070 PF01797 Transposase IS200 like ISU65_18075 PF09186 Domain of unknown function (DUF1949) ISU65_18075 PF01205 Uncharacterized protein family UPF0029 ISU65_18080 PF00557 Metallopeptidase family M24 ISU65_18085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU65_18085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU65_18085 PF00378 Enoyl-CoA hydratase/isomerase ISU65_18090 PF00108 Thiolase, N-terminal domain ISU65_18090 PF02803 Thiolase, C-terminal domain ISU65_18095 PF00970 Oxidoreductase FAD-binding domain ISU65_18095 PF00175 Oxidoreductase NAD-binding domain ISU65_18100 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU65_18105 PF02357 Transcription termination factor nusG ISU65_18110 PF00490 Delta-aminolevulinic acid dehydratase ISU65_18115 PF01026 TatD related DNase ISU65_18120 PF01695 IstB-like ATP binding protein ISU65_18125 PF02796 Helix-turn-helix domain of resolvase ISU65_18125 PF00665 Integrase core domain ISU65_18135 PF00902 Sec-independent protein translocase protein (TatC) ISU65_18145 PF02416 mttA/Hcf106 family ISU65_18150 PF03109 ABC1 family ISU65_18155 PF02036 SCP-2 sterol transfer family ISU65_18160 PF01209 ubiE/COQ5 methyltransferase family ISU65_18165 PF02646 RmuC family ISU65_18170 PF09335 SNARE associated Golgi protein ISU65_18175 PF13722 5TM C-terminal transporter carbon starvation CstA ISU65_18175 PF02554 Carbon starvation protein CstA ISU65_18185 PF01048 Phosphorylase superfamily ISU65_18190 PF01738 Dienelactone hydrolase family ISU65_18195 PF08267 Cobalamin-independent synthase, N-terminal domain ISU65_18195 PF01717 Cobalamin-independent synthase, Catalytic domain ISU65_18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_18200 PF03466 LysR substrate binding domain ISU65_18205 PF00892 EamA-like transporter family ISU65_18210 PF03547 Membrane transport protein ISU65_18215 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU65_18220 PF00005 ABC transporter ISU65_18220 PF17912 MalK OB fold domain ISU65_18225 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_18230 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_18235 PF13416 Bacterial extracellular solute-binding protein ISU65_18275 PF00005 ABC transporter ISU65_18280 PF00005 ABC transporter ISU65_18280 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU65_18285 PF11862 Domain of unknown function (DUF3382) ISU65_18285 PF02653 Branched-chain amino acid transport system / permease component ISU65_18290 PF02653 Branched-chain amino acid transport system / permease component ISU65_18295 PF13458 Periplasmic binding protein ISU65_18300 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU65_18305 PF01797 Transposase IS200 like ISU65_18310 PF04545 Sigma-70, region 4 ISU65_18310 PF00140 Sigma-70 factor, region 1.2 ISU65_18310 PF04542 Sigma-70 region 2 ISU65_18315 PF18075 FtsX extracellular domain ISU65_18315 PF02687 FtsX-like permease family ISU65_18320 PF00005 ABC transporter ISU65_18325 PF00448 SRP54-type protein, GTPase domain ISU65_18325 PF02881 SRP54-type protein, helical bundle domain ISU65_18325 PF02881 SRP54-type protein, helical bundle domain ISU65_18325 PF00448 SRP54-type protein, GTPase domain ISU65_18335 PF06611 Protein of unknown function (DUF1145) ISU65_18350 PF07947 YhhN family ISU65_18355 PF00403 Heavy-metal-associated domain ISU65_18360 PF01206 Sulfurtransferase TusA ISU65_18365 PF02592 Putative vitamin uptake transporter ISU65_18370 PF08786 DcrB ISU65_18375 PF02754 Cysteine-rich domain ISU65_18375 PF13183 4Fe-4S dicluster domain ISU65_18380 PF00890 FAD binding domain ISU65_18385 PF04324 BFD-like [2Fe-2S] binding domain ISU65_18385 PF01266 FAD dependent oxidoreductase ISU65_18390 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU65_18405 PF12146 Serine aminopeptidase, S33 ISU65_18410 PF01810 LysE type translocator ISU65_18415 PF01810 LysE type translocator ISU65_18420 PF16124 RecQ zinc-binding ISU65_18420 PF00570 HRDC domain ISU65_18420 PF00270 DEAD/DEAH box helicase ISU65_18420 PF00271 Helicase conserved C-terminal domain ISU65_18420 PF09382 RQC domain ISU65_18425 PF02253 Phospholipase A1 ISU65_18430 PF03061 Thioesterase superfamily ISU65_18435 PF00892 EamA-like transporter family ISU65_18440 PF01544 CorA-like Mg2+ transporter protein ISU65_18445 PF09370 Phosphoenolpyruvate hydrolase-like ISU65_18460 PF00580 UvrD/REP helicase N-terminal domain ISU65_18460 PF13361 UvrD-like helicase C-terminal domain ISU65_18465 PF13419 Haloacid dehalogenase-like hydrolase ISU65_18470 PF00589 Phage integrase family ISU65_18470 PF02899 Phage integrase, N-terminal SAM-like domain ISU65_18475 PF04340 Protein of unknown function, DUF484 ISU65_18480 PF01678 Diaminopimelate epimerase ISU65_18485 PF13627 Prokaryotic lipoprotein-attachment site ISU65_18490 PF01491 Frataxin-like domain ISU65_18495 PF12633 Adenylate cyclase NT domain ISU65_18495 PF01295 Adenylate cyclase, class-I ISU65_18505 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU65_18505 PF03900 Porphobilinogen deaminase, C-terminal domain ISU65_18510 PF02602 Uroporphyrinogen-III synthase HemD ISU65_18515 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU65_18520 PF07719 Tetratricopeptide repeat ISU65_18520 PF07219 HemY protein N-terminus ISU65_18525 PF01797 Transposase IS200 like ISU65_18550 PF00324 Amino acid permease ISU65_18555 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU65_18560 PF06899 WzyE protein, O-antigen assembly polymerase ISU65_18565 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU65_18570 PF01943 Polysaccharide biosynthesis protein ISU65_18575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU65_18585 PF00483 Nucleotidyl transferase ISU65_18590 PF16363 GDP-mannose 4,6 dehydratase ISU65_18595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU65_18595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU65_18595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU65_18600 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU65_18605 PF02706 Chain length determinant protein ISU65_18610 PF00953 Glycosyl transferase family 4 ISU65_18615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU65_18615 PF07498 Rho termination factor, N-terminal domain ISU65_18615 PF07497 Rho termination factor, RNA-binding domain ISU65_18620 PF00085 Thioredoxin ISU65_18625 PF00271 Helicase conserved C-terminal domain ISU65_18625 PF00270 DEAD/DEAH box helicase ISU65_18635 PF13361 UvrD-like helicase C-terminal domain ISU65_18635 PF00580 UvrD/REP helicase N-terminal domain ISU65_18655 PF00872 Transposase, Mutator family ISU65_18665 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_18665 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_18670 PF13953 PapC C-terminal domain ISU65_18670 PF00577 Outer membrane usher protein ISU65_18670 PF13954 PapC N-terminal domain ISU65_18680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU65_18680 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU65_18685 PF01320 Colicin immunity protein / pyocin immunity protein ISU65_18710 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU65_18710 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU65_18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_18715 PF03466 LysR substrate binding domain ISU65_18750 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU65_18750 PF00291 Pyridoxal-phosphate dependent enzyme ISU65_18755 PF00920 Dehydratase family ISU65_18760 PF01063 Amino-transferase class IV ISU65_18770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU65_18770 PF00205 Thiamine pyrophosphate enzyme, central domain ISU65_18770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU65_18775 PF08046 IlvGEDA operon leader peptide ISU65_18780 PF01078 Magnesium chelatase, subunit ChlI ISU65_18780 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU65_18785 PF04219 Protein of unknown function, DUF ISU65_18790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_18790 PF03466 LysR substrate binding domain ISU65_18795 PF02653 Branched-chain amino acid transport system / permease component ISU65_18800 PF02653 Branched-chain amino acid transport system / permease component ISU65_18805 PF00005 ABC transporter ISU65_18810 PF13407 Periplasmic binding protein domain ISU65_18845 PF01177 Asp/Glu/Hydantoin racemase ISU65_18850 PF00593 TonB dependent receptor ISU65_18850 PF07715 TonB-dependent Receptor Plug Domain ISU65_18855 PF05958 tRNA (Uracil-5-)-methyltransferase ISU65_18860 PF07226 Protein of unknown function (DUF1422) ISU65_18865 PF00440 Bacterial regulatory proteins, tetR family ISU65_18870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU65_18870 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_18875 PF03466 LysR substrate binding domain ISU65_18880 PF00462 Glutaredoxin ISU65_18880 PF08534 Redoxin ISU65_18885 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_18885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU65_18890 PF03544 Gram-negative bacterial TonB protein C-terminal ISU65_18895 PF00529 HlyD membrane-fusion protein of T1SS ISU65_18900 PF00664 ABC transporter transmembrane region ISU65_18900 PF00005 ABC transporter ISU65_18910 PF07715 TonB-dependent Receptor Plug Domain ISU65_18910 PF00593 TonB dependent receptor ISU65_18915 PF14698 Argininosuccinate lyase C-terminal ISU65_18915 PF00206 Lyase ISU65_18920 PF00696 Amino acid kinase family ISU65_18925 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU65_18925 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU65_18930 PF07687 Peptidase dimerisation domain ISU65_18930 PF01546 Peptidase family M20/M25/M40 ISU65_18935 PF00311 Phosphoenolpyruvate carboxylase ISU65_18945 PF02219 Methylenetetrahydrofolate reductase ISU65_18950 PF00696 Amino acid kinase family ISU65_18950 PF03447 Homoserine dehydrogenase, NAD binding domain ISU65_18950 PF00742 Homoserine dehydrogenase ISU65_18960 PF01340 Met Apo-repressor, MetJ ISU65_18965 PF05360 yiaA/B two helix domain ISU65_18970 PF01197 Ribosomal protein L31 ISU65_18975 PF17764 3′ DNA-binding domain (3′BD) ISU65_18975 PF00271 Helicase conserved C-terminal domain ISU65_18975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU65_18975 PF00270 DEAD/DEAH box helicase ISU65_18975 PF18074 Primosomal protein N C-terminal domain ISU65_18980 PF00356 Bacterial regulatory proteins, lacI family ISU65_18985 PF05036 Sporulation related domain ISU65_18990 PF00227 Proteasome subunit ISU65_18995 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_18995 PF07724 AAA domain (Cdc48 subfamily) ISU65_18995 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_19000 PF01040 UbiA prenyltransferase family ISU65_19005 PF03737 Aldolase/RraA ISU65_19020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU65_19020 PF00529 HlyD membrane-fusion protein of T1SS ISU65_19025 PF00664 ABC transporter transmembrane region ISU65_19025 PF00005 ABC transporter ISU65_19025 PF03412 Peptidase C39 family ISU65_19030 PF01695 IstB-like ATP binding protein ISU65_19035 PF00665 Integrase core domain ISU65_19035 PF02796 Helix-turn-helix domain of resolvase ISU65_19065 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU65_19075 PF07724 AAA domain (Cdc48 subfamily) ISU65_19075 PF10431 C-terminal, D2-small domain, of ClpB protein ISU65_19075 PF17871 AAA lid domain ISU65_19075 PF00004 ATPase family associated with various cellular activities (AAA) ISU65_19110 PF04717 Type VI secretion system, phage-baseplate injector ISU65_19125 PF05593 RHS Repeat ISU65_19125 PF03527 RHS protein ISU65_19155 PF04717 Type VI secretion system, phage-baseplate injector ISU65_19165 PF03527 RHS protein ISU65_19165 PF05593 RHS Repeat ISU65_19185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU65_19185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU65_19190 PF12833 Helix-turn-helix domain ISU65_19190 PF02311 AraC-like ligand binding domain ISU65_19195 PF05025 RbsD / FucU transport protein family ISU65_19200 PF00294 pfkB family carbohydrate kinase ISU65_19205 PF01791 DeoC/LacD family aldolase ISU65_19210 PF03358 NADPH-dependent FMN reductase ISU65_19215 PF09084 NMT1/THI5 like ISU65_19220 PF00296 Luciferase-like monooxygenase ISU65_19225 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_19230 PF00005 ABC transporter ISU65_19240 PF04221 RelB antitoxin ISU65_19245 PF00860 Permease family ISU65_19250 PF00999 Sodium/hydrogen exchanger family ISU65_19260 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU65_19270 PF00005 ABC transporter ISU65_19275 PF02653 Branched-chain amino acid transport system / permease component ISU65_19285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_19285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_19290 PF00571 CBS domain ISU65_19290 PF01380 SIS domain ISU65_19295 PF02798 Glutathione S-transferase, N-terminal domain ISU65_19310 PF01797 Transposase IS200 like ISU65_19315 PF00313 'Cold-shock' DNA-binding domain ISU65_19320 PF00313 'Cold-shock' DNA-binding domain ISU65_19325 PF05433 Glycine zipper 2TM domain ISU65_19330 PF00753 Metallo-beta-lactamase superfamily ISU65_19335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU65_19335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU65_19340 PF02627 Carboxymuconolactone decarboxylase family ISU65_19345 PF07690 Major Facilitator Superfamily ISU65_19370 PF02954 Bacterial regulatory protein, Fis family ISU65_19375 PF01207 Dihydrouridine synthase (Dus) ISU65_19385 PF00474 Sodium:solute symporter family ISU65_19390 PF06196 Protein of unknown function (DUF997) ISU65_19400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU65_19400 PF02785 Biotin carboxylase C-terminal domain ISU65_19400 PF00289 Biotin carboxylase, N-terminal domain ISU65_19405 PF00364 Biotin-requiring enzyme ISU65_19410 PF01220 Dehydroquinase class II ISU65_19415 PF01794 Ferric reductase like transmembrane component ISU65_19420 PF00174 Oxidoreductase molybdopterin binding domain ISU65_19425 PF08240 Alcohol dehydrogenase GroES-like domain ISU65_19425 PF00107 Zinc-binding dehydrogenase ISU65_19430 PF00990 Diguanylate cyclase, GGDEF domain ISU65_19430 PF17157 Gammaproteobacterial periplasmic sensor domain ISU65_19430 PF00563 EAL domain ISU65_19440 PF04085 rod shape-determining protein MreC ISU65_19445 PF04093 rod shape-determining protein MreD ISU65_19450 PF02545 Maf-like protein ISU65_19455 PF10150 Ribonuclease E/G family ISU65_19455 PF00575 S1 RNA binding domain ISU65_19460 PF13502 AsmA-like C-terminal region ISU65_19460 PF13116 Protein of unknown function ISU65_19465 PF00795 Carbon-nitrogen hydrolase ISU65_19470 PF01523 Putative modulator of DNA gyrase ISU65_19475 PF14431 YwqJ-like deaminase ISU65_19475 PF18807 Tripartite Tc toxins repeat ISU65_19480 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU65_19480 PF18807 Tripartite Tc toxins repeat ISU65_19500 PF03534 Salmonella virulence plasmid 65kDa B protein ISU65_19500 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU65_19500 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU65_19505 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU65_19505 PF18413 Neuraminidase-like domain ISU65_19515 PF03466 LysR substrate binding domain ISU65_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_19520 PF03466 LysR substrate binding domain ISU65_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_19525 PF07869 Protein of unknown function (DUF1656) ISU65_19530 PF13533 Biotin-lipoyl like ISU65_19535 PF04632 Fusaric acid resistance protein family ISU65_19550 PF01337 Barstar (barnase inhibitor) ISU65_19555 PF04751 Protein of unknown function (DUF615) ISU65_19560 PF01523 Putative modulator of DNA gyrase ISU65_19570 PF07361 Cytochrome b562 ISU65_19575 PF14760 Rnk N-terminus ISU65_19575 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU65_19580 PF11941 Domain of unknown function (DUF3459) ISU65_19580 PF00128 Alpha amylase, catalytic domain ISU65_19585 PF02378 Phosphotransferase system, EIIC ISU65_19585 PF00367 phosphotransferase system, EIIB ISU65_19590 PF00356 Bacterial regulatory proteins, lacI family ISU65_19600 PF01042 Endoribonuclease L-PSP ISU65_19605 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU65_19605 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU65_19610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU65_19610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU65_19615 PF00381 PTS HPr component phosphorylation site ISU65_19620 PF03668 P-loop ATPase protein family ISU65_19625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU65_19635 PF04963 Sigma-54 factor, core binding domain ISU65_19635 PF04552 Sigma-54, DNA binding domain ISU65_19635 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU65_19640 PF00005 ABC transporter ISU65_19640 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU65_19645 PF03968 OstA-like protein ISU65_19650 PF06835 Lipopolysaccharide-assembly, LptC-related ISU65_19660 PF01380 SIS domain ISU65_19660 PF00571 CBS domain ISU65_19665 PF01699 Sodium/calcium exchanger protein ISU65_19670 PF00005 ABC transporter ISU65_19675 PF02405 Permease MlaE ISU65_19680 PF02470 MlaD protein ISU65_19685 PF05494 MlaC protein ISU65_19690 PF13466 STAS domain ISU65_19695 PF01722 BolA-like protein ISU65_19700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU65_19705 PF13180 PDZ domain ISU65_19710 PF01797 Transposase IS200 like ISU65_19715 PF00595 PDZ domain ISU65_19715 PF13180 PDZ domain ISU65_19720 PF06295 Protein of unknown function (DUF1043) ISU65_19725 PF03969 AFG1-like ATPase ISU65_19730 PF00572 Ribosomal protein L13 ISU65_19735 PF00380 Ribosomal protein S9/S16 ISU65_19745 PF02798 Glutathione S-transferase, N-terminal domain ISU65_19745 PF00043 Glutathione S-transferase, C-terminal domain ISU65_19750 PF04386 Stringent starvation protein B ISU65_19760 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU65_19760 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU65_19765 PF04898 Glutamate synthase central domain ISU65_19765 PF01493 GXGXG motif ISU65_19765 PF01645 Conserved region in glutamate synthase ISU65_19765 PF00310 Glutamine amidotransferases class-II ISU65_19770 PF16199 Radical_SAM C-terminal domain ISU65_19770 PF04055 Radical SAM superfamily ISU65_19775 PF01627 Hpt domain ISU65_19775 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU65_19775 PF00512 His Kinase A (phospho-acceptor) domain ISU65_19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_19775 PF00072 Response regulator receiver domain ISU65_19775 PF00989 PAS fold ISU65_19785 PF00912 Transglycosylase ISU65_19790 PF04972 BON domain ISU65_19795 PF13580 SIS domain ISU65_19800 PF02021 Uncharacterised protein family UPF0102 ISU65_19805 PF04348 LppC putative lipoprotein ISU65_19810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU65_19820 PF02678 Pirin ISU65_19820 PF17954 Quercetinase C-terminal cupin domain ISU65_19825 PF03466 LysR substrate binding domain ISU65_19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_19835 PF01695 IstB-like ATP binding protein ISU65_19840 PF00665 Integrase core domain ISU65_19840 PF02796 Helix-turn-helix domain of resolvase ISU65_19845 PF01797 Transposase IS200 like ISU65_19850 PF06005 Cell division protein ZapB ISU65_19855 PF00230 Major intrinsic protein ISU65_19860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU65_19860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU65_19865 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU65_19870 PF00970 Oxidoreductase FAD-binding domain ISU65_19870 PF00175 Oxidoreductase NAD-binding domain ISU65_19875 PF05656 Protein of unknown function (DUF805) ISU65_19880 PF07305 Protein of unknown function (DUF1454) ISU65_19885 PF00121 Triosephosphate isomerase ISU65_19890 PF03466 LysR substrate binding domain ISU65_19890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU65_19895 PF02585 GlcNAc-PI de-N-acetylase ISU65_19900 PF03737 Aldolase/RraA ISU65_19905 PF00939 Sodium:sulfate symporter transmembrane region ISU65_19920 PF00365 Phosphofructokinase ISU65_19925 PF01545 Cation efflux family ISU65_19925 PF16916 Dimerisation domain of Zinc Transporter ISU65_19930 PF04754 Putative transposase, YhgA-like ISU65_19940 PF07813 LTXXQ motif family protein ISU65_19945 PF00072 Response regulator receiver domain ISU65_19945 PF00486 Transcriptional regulatory protein, C terminal ISU65_19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU65_19950 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU65_19950 PF00672 HAMP domain ISU65_19950 PF00512 His Kinase A (phospho-acceptor) domain ISU65_19955 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU65_19955 PF02805 Metal binding domain of Ada ISU65_19955 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU65_19955 PF12833 Helix-turn-helix domain ISU65_19960 PF00588 SpoU rRNA Methylase family ISU65_19965 PF06426 Serine acetyltransferase, N-terminal ISU65_19965 PF00132 Bacterial transferase hexapeptide (six repeats) ISU65_19970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU65_19970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU65_19975 PF02556 Preprotein translocase subunit SecB ISU65_19980 PF00462 Glutaredoxin ISU65_19985 PF00581 Rhodanese-like domain ISU65_19990 PF01676 Metalloenzyme superfamily ISU65_19990 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU65_19995 PF01551 Peptidase family M23 ISU65_20005 PF00107 Zinc-binding dehydrogenase ISU65_20005 PF08240 Alcohol dehydrogenase GroES-like domain ISU65_20010 PF00155 Aminotransferase class I and II ISU65_20015 PF01370 NAD dependent epimerase/dehydratase family ISU65_20020 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU65_20025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU65_20030 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU65_20035 PF00535 Glycosyl transferase family 2 ISU65_20040 PF01467 Cytidylyltransferase-like ISU65_20045 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU65_20045 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU65_20045 PF06827 Zinc finger found in FPG and IleRS ISU65_20050 PF00471 Ribosomal protein L33 ISU65_20055 PF00830 Ribosomal L28 family ISU65_20060 PF04002 RadC-like JAB domain ISU65_20065 PF02441 Flavoprotein ISU65_20065 PF04127 DNA / pantothenate metabolism flavoprotein ISU65_20070 PF00692 dUTPase ISU65_20075 PF00440 Bacterial regulatory proteins, tetR family ISU65_20080 PF00156 Phosphoribosyl transferase domain ISU65_20085 PF01138 3' exoribonuclease family, domain 1 ISU65_20085 PF03725 3' exoribonuclease family, domain 2 ISU65_20090 PF08340 Domain of unknown function (DUF1732) ISU65_20090 PF03755 YicC-like family, N-terminal region ISU65_20095 PF03458 UPF0126 domain ISU65_20100 PF01653 NAD-dependent DNA ligase adenylation domain ISU65_20100 PF03120 NAD-dependent DNA ligase OB-fold domain ISU65_20105 PF00625 Guanylate kinase ISU65_20110 PF01192 RNA polymerase Rpb6 ISU65_20115 PF13291 ACT domain ISU65_20115 PF04607 Region found in RelA / SpoT proteins ISU65_20115 PF02824 TGS domain ISU65_20120 PF12105 SpoU, rRNA methylase, C-terminal ISU65_20120 PF00588 SpoU rRNA Methylase family ISU65_20125 PF17191 RecG wedge domain ISU65_20125 PF00271 Helicase conserved C-terminal domain ISU65_20125 PF00270 DEAD/DEAH box helicase ISU65_20135 PF03616 Sodium/glutamate symporter ISU65_20140 PF00860 Permease family ISU65_20145 PF05170 AsmA family ISU65_20150 PF00583 Acetyltransferase (GNAT) family ISU65_20150 PF09500 Putative thioesterase (yiiD_Cterm) ISU65_20155 PF02796 Helix-turn-helix domain of resolvase ISU65_20155 PF00665 Integrase core domain ISU65_20160 PF01695 IstB-like ATP binding protein ISU65_20180 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU65_20190 PF05638 Type VI secretion system effector, Hcp ISU65_20200 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU65_20205 PF02264 LamB porin ISU65_20210 PF17912 MalK OB fold domain ISU65_20210 PF00005 ABC transporter ISU65_20220 PF01547 Bacterial extracellular solute-binding protein ISU65_20225 PF14785 Maltose transport system permease protein MalF P2 domain ISU65_20225 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_20230 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_20235 PF06146 Phosphate-starvation-inducible E ISU65_20240 PF00342 Phosphoglucose isomerase ISU65_20245 PF01842 ACT domain ISU65_20245 PF00696 Amino acid kinase family ISU65_20250 PF17287 POTRA domain ISU65_20250 PF08479 POTRA domain, ShlB-type ISU65_20250 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU65_20255 PF05860 haemagglutination activity domain ISU65_20255 PF13332 Hemagglutinin repeat ISU65_20260 PF02310 B12 binding domain ISU65_20260 PF02607 B12 binding domain ISU65_20260 PF00809 Pterin binding enzyme ISU65_20260 PF02574 Homocysteine S-methyltransferase ISU65_20260 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISU65_20270 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU65_20275 PF00463 Isocitrate lyase family ISU65_20280 PF01274 Malate synthase ISU65_20285 PF04204 Homoserine O-succinyltransferase ISU65_20320 PF00392 Bacterial regulatory proteins, gntR family ISU65_20320 PF07729 FCD domain ISU65_20325 PF07690 Major Facilitator Superfamily ISU65_20340 PF00294 pfkB family carbohydrate kinase ISU65_20345 PF05025 RbsD / FucU transport protein family ISU65_20350 PF00665 Integrase core domain ISU65_20350 PF02796 Helix-turn-helix domain of resolvase ISU65_20355 PF01695 IstB-like ATP binding protein ISU65_20360 PF02705 K+ potassium transporter ISU65_20365 PF12592 Protein of unknown function (DUF3763) ISU65_20365 PF07728 AAA domain (dynein-related subfamily) ISU65_20365 PF17868 AAA lid domain ISU65_20370 PF05762 VWA domain containing CoxE-like protein ISU65_20375 PF03590 Aspartate-ammonia ligase ISU65_20380 PF01037 Lrp/AsnC ligand binding domain ISU65_20385 PF00258 Flavodoxin ISU65_20390 PF13932 GidA associated domain ISU65_20390 PF01134 Glucose inhibited division protein A ISU65_20395 PF02527 rRNA small subunit methyltransferase G ISU65_20400 PF03899 ATP synthase I chain ISU65_20405 PF00119 ATP synthase A chain ISU65_20410 PF00137 ATP synthase subunit C ISU65_20415 PF00430 ATP synthase B/B' CF(0) ISU65_20420 PF00213 ATP synthase delta (OSCP) subunit ISU65_20425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU65_20425 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU65_20425 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU65_20430 PF00231 ATP synthase ISU65_20435 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU65_20435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU65_20440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU65_20440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU65_20445 PF00132 Bacterial transferase hexapeptide (six repeats) ISU65_20445 PF12804 MobA-like NTP transferase domain ISU65_20450 PF01380 SIS domain ISU65_20455 PF12849 PBP superfamily domain ISU65_20460 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_20465 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_20470 PF00005 ABC transporter ISU65_20475 PF01895 PhoU domain ISU65_20485 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU65_20490 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_20495 PF00528 Binding-protein-dependent transport system inner membrane component ISU65_20500 PF13419 Haloacid dehalogenase-like hydrolase ISU65_20510 PF00860 Permease family ISU65_20530 PF01797 Transposase IS200 like ISU65_20535 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU65_20535 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU65_20535 PF07055 Enoyl reductase FAD binding domain ISU65_20540 PF12631 MnmE helical domain ISU65_20540 PF01926 50S ribosome-binding GTPase ISU65_20540 PF10396 GTP-binding protein TrmE N-terminus ISU65_20545 PF14849 YidC periplasmic domain ISU65_20545 PF02096 60Kd inner membrane protein ISU65_20550 PF01809 Putative membrane protein insertion efficiency factor ISU65_20555 PF00825 Ribonuclease P ISU65_20560 PF00468 Ribosomal protein L34