YPN_0001 IPR001094 Flavodoxin YPN_0001 IPR008254 Flavodoxin/nitric oxide synthase YPN_0001 IPR029039 Flavoprotein-like YPN_0002 IPR000485 AsnC-type HTH domain YPN_0002 IPR011008 Dimeric alpha-beta barrel YPN_0002 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPN_0002 IPR019887 Transcription regulator AsnC-type, C-terminal YPN_0002 IPR019888 Transcription regulator AsnC-type YPN_0002 IPR036388 YPN_0002 YPN_0002 IPR036390 YPN_0002 YPN_0003 IPR004618 Aspartate--ammonia ligase YPN_0004 IPR002035 von Willebrand factor, type A YPN_0004 IPR008912 Uncharacterised protein family CoxE-like YPN_0004 IPR023481 Uncharacterised protein family ViaA YPN_0004 IPR036465 YPN_0004 YPN_0005 IPR003593 AAA+ ATPase domain YPN_0005 IPR011704 ATPase, dynein-related, AAA domain YPN_0005 IPR022547 ATPase, RavA, C-terminal YPN_0005 IPR023671 ATPase RavA YPN_0005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0006 IPR003855 K+ potassium transporter YPN_0006 IPR023051 Potassium uptake protein, low affinity, Kup YPN_0007 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPN_0007 IPR023064 D-ribose pyranase YPN_0007 IPR023750 RbsD-like domain YPN_0008 IPR002139 Ribokinase YPN_0008 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPN_0008 IPR011611 Carbohydrate kinase PfkB YPN_0008 IPR011877 Ribokinase, bacterial YPN_0008 IPR029056 Ribokinase-like YPN_0010 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPN_0010 IPR011701 Major facilitator superfamily YPN_0010 IPR036259 YPN_0010 YPN_0011 IPR000524 Transcription regulator HTH, GntR YPN_0011 IPR008920 Transcription regulator FadR/GntR, C-terminal YPN_0011 IPR011711 GntR, C-terminal YPN_0011 IPR036388 YPN_0011 YPN_0011 IPR036390 YPN_0011 YPN_0012 IPR005697 Homoserine O-succinyltransferase YPN_0012 IPR029062 Class I glutamine amidotransferase-like YPN_0012 IPR033752 YPN_0012 YPN_0014 IPR001465 Malate synthase YPN_0014 IPR006252 Malate synthase A YPN_0014 IPR011076 Malate synthase-like YPN_0015 IPR006254 Isocitrate lyase YPN_0015 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_0015 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YPN_0016 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPN_0017 IPR014757 Transcription regulator IclR, C-terminal YPN_0017 IPR029016 GAF domain-like YPN_0018 IPR000489 Pterin-binding YPN_0018 IPR003726 Homocysteine S-methyltransferase YPN_0018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPN_0018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YPN_0018 IPR006158 Cobalamin (vitamin B12)-binding domain YPN_0018 IPR011005 Dihydropteroate synthase-like YPN_0018 IPR011822 Cobalamin-dependent methionine synthase YPN_0018 IPR036589 YPN_0018 YPN_0018 IPR036594 YPN_0018 YPN_0018 IPR036724 YPN_0018 YPN_0018 IPR037010 YPN_0018 YPN_0019 IPR008638 Filamentous haemagglutinin, N-terminal YPN_0019 IPR011050 Pectin lyase fold/virulence factor YPN_0019 IPR012334 Pectin lyase fold YPN_0019 IPR025157 Haemagluttinin repeat YPN_0020 IPR005565 Haemolysin activator HlyB YPN_0020 IPR013686 Polypeptide-transport-associated, ShlB-type YPN_0020 IPR027282 Two partner secretion pathway transporter YPN_0020 IPR035251 YPN_0020 YPN_0022 IPR001048 Aspartate/glutamate/uridylate kinase YPN_0022 IPR001341 Aspartate kinase domain YPN_0022 IPR005260 Aspartate kinase, monofunctional class YPN_0022 IPR018042 Aspartate kinase, conserved site YPN_0022 IPR036393 YPN_0022 YPN_0023 IPR001672 Phosphoglucose isomerase (PGI) YPN_0023 IPR018189 Phosphoglucose isomerase, conserved site YPN_0023 IPR023096 Phosphoglucose isomerase, C-terminal YPN_0024 IPR009315 Phosphate-starvation-induced PsiE YPN_0024 IPR020948 Phosphate-starvation-induced PsiE-like YPN_0025 IPR000515 MetI-like domain YPN_0025 IPR035906 YPN_0025 YPN_0026 IPR000515 MetI-like domain YPN_0026 IPR029345 Maltose transport system permease protein MalF, P2 domain YPN_0026 IPR035277 YPN_0026 YPN_0026 IPR035906 YPN_0026 YPN_0027 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_0027 IPR006060 Maltose binding protein YPN_0027 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPN_0029 IPR003439 ABC transporter-like YPN_0029 IPR003593 AAA+ ATPase domain YPN_0029 IPR008995 Molybdate/tungstate binding, C-terminal YPN_0029 IPR013611 Transport-associated OB, type 2 YPN_0029 IPR017871 ABC transporter, conserved site YPN_0029 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0030 IPR003192 Porin, LamB type YPN_0030 IPR023738 Maltoporin YPN_0030 IPR036998 YPN_0030 YPN_0031 IPR010794 Maltose operon periplasmic YPN_0033 IPR008514 Type VI secretion system effector, Hcp YPN_0033 IPR036624 YPN_0033 YPN_0034 IPR008312 Uncharacterised conserved protein UCP028301 YPN_0035 IPR010269 Protein of unknown function DUF877 YPN_0036 IPR007048 GpW/Gp25/anti-adapter protein IraD YPN_0036 IPR017737 Type VI secretion system, lysozyme-related protein YPN_0037 IPR010272 Type VI secretion system, VCA0110 YPN_0038 IPR001584 Integrase, catalytic core YPN_0038 IPR012337 Ribonuclease H-like domain YPN_0038 IPR025948 HTH-like domain YPN_0038 IPR036397 YPN_0038 YPN_0039 IPR009057 Homeodomain-like YPN_0039 IPR010921 Trp repressor/replication initiator YPN_0040 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_0040 IPR018129 Phosphoenolpyruvate carboxylase, active site YPN_0040 IPR021135 Phosphoenolpyruvate carboxylase YPN_0040 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YPN_0040 IPR033129 YPN_0040 YPN_0041 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPN_0041 IPR002933 Peptidase M20 YPN_0041 IPR010169 Acetylornithine deacetylase (ArgE) YPN_0041 IPR011650 Peptidase M20, dimerisation domain YPN_0041 IPR036264 YPN_0041 YPN_0042 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPN_0042 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YPN_0042 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPN_0042 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YPN_0042 IPR036291 YPN_0042 YPN_0043 IPR001048 Aspartate/glutamate/uridylate kinase YPN_0043 IPR004662 Acetylglutamate kinase YPN_0043 IPR036393 YPN_0043 YPN_0043 IPR037528 YPN_0043 YPN_0044 IPR000362 Fumarate lyase family YPN_0044 IPR008948 L-Aspartase-like YPN_0044 IPR009049 Argininosuccinate lyase YPN_0044 IPR020557 Fumarate lyase, conserved site YPN_0044 IPR022761 Fumarate lyase, N-terminal YPN_0044 IPR024083 Fumarase/histidase, N-terminal YPN_0044 IPR029419 Argininosuccinate lyase, C-terminal YPN_0045 IPR000531 TonB-dependent receptor, beta-barrel YPN_0045 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPN_0045 IPR011276 TonB-dependent haem/haemoglobin receptor YPN_0045 IPR012910 TonB-dependent receptor, plug YPN_0045 IPR036942 YPN_0045 YPN_0045 IPR037066 YPN_0045 YPN_0046 IPR010495 Haem-binding HasA YPN_0046 IPR036912 YPN_0046 YPN_0047 IPR003439 ABC transporter-like YPN_0047 IPR003593 AAA+ ATPase domain YPN_0047 IPR010128 ATPase, type I secretion system, PrtD YPN_0047 IPR011527 ABC transporter type 1, transmembrane domain YPN_0047 IPR017871 ABC transporter, conserved site YPN_0047 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0047 IPR036640 YPN_0047 YPN_0048 IPR003997 RTX secretion protein D, Gram-negative bacteria YPN_0048 IPR006144 Secretion protein HlyD, conserved site YPN_0048 IPR010129 Type I secretion membrane fusion protein, HlyD YPN_0048 IPR039562 YPN_0048 YPN_0049 IPR006260 TonB, C-terminal YPN_0049 IPR037682 YPN_0049 YPN_0050 IPR001100 YPN_0050 YPN_0050 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPN_0050 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPN_0050 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_0050 IPR036188 YPN_0050 YPN_0050 IPR036324 YPN_0050 YPN_0051 IPR002109 Glutaredoxin YPN_0051 IPR011767 Glutaredoxin active site YPN_0051 IPR011906 Glutaredoxin domain YPN_0051 IPR013740 Redoxin YPN_0051 IPR014025 Glutaredoxin subgroup YPN_0051 IPR036249 YPN_0051 YPN_0052 IPR000847 Transcription regulator HTH, LysR YPN_0052 IPR005119 LysR, substrate-binding YPN_0052 IPR036388 YPN_0052 YPN_0052 IPR036390 YPN_0052 YPN_0053 IPR001100 YPN_0053 YPN_0053 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPN_0053 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPN_0053 IPR022962 Soluble pyridine nucleotide transhydrogenase YPN_0053 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_0053 IPR036188 YPN_0053 YPN_0054 IPR001647 DNA-binding HTH domain, TetR-type YPN_0054 IPR009057 Homeodomain-like YPN_0054 IPR023764 Transcriptional repressor HTH, FabR YPN_0055 IPR009867 Protein of unknown function DUF1422 YPN_0056 IPR010280 (Uracil-5)-methyltransferase family YPN_0056 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YPN_0056 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0056 IPR030390 YPN_0056 YPN_0056 IPR030391 YPN_0056 YPN_0057 IPR000531 TonB-dependent receptor, beta-barrel YPN_0057 IPR010101 TonB-dependent vitamin B12 transporter BtuB YPN_0057 IPR010917 TonB-dependent receptor, conserved site YPN_0057 IPR012910 TonB-dependent receptor, plug YPN_0057 IPR036942 YPN_0057 YPN_0057 IPR037066 YPN_0057 YPN_0058 IPR001920 Asp/Glu racemase YPN_0058 IPR004391 Glutamate racemase YPN_0058 IPR015942 Asp/Glu/hydantoin racemase YPN_0058 IPR018187 Asp/Glu racemase, active site YPN_0058 IPR033134 YPN_0058 YPN_0059 IPR025997 Periplasmic binding protein domain YPN_0059 IPR028082 Periplasmic binding protein-like I YPN_0060 IPR003439 ABC transporter-like YPN_0060 IPR003593 AAA+ ATPase domain YPN_0060 IPR017871 ABC transporter, conserved site YPN_0060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0061 IPR001851 ABC transporter, permease YPN_0062 IPR001851 ABC transporter, permease YPN_0063 IPR000847 Transcription regulator HTH, LysR YPN_0063 IPR005119 LysR, substrate-binding YPN_0063 IPR020890 Transcription regulator HTH, HdfR YPN_0063 IPR036388 YPN_0063 YPN_0063 IPR036390 YPN_0063 YPN_0064 IPR007335 Protein of unknown function DUF413 YPN_0065 IPR000523 Magnesium chelatase, ChlI subunit YPN_0065 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase YPN_0065 IPR003593 AAA+ ATPase domain YPN_0065 IPR004482 Mg chelatase-related protein YPN_0065 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0065 IPR025158 Mg chelatase-related protein, C-terminal domain YPN_0065 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0066 IPR000399 TPP-binding enzyme, conserved site YPN_0066 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPN_0066 IPR012000 Thiamine pyrophosphate enzyme, central domain YPN_0066 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPN_0066 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPN_0066 IPR029035 DHS-like NAD/FAD-binding domain YPN_0066 IPR029061 Thiamin diphosphate-binding fold YPN_0068 IPR001544 Aminotransferase, class IV YPN_0068 IPR005785 Branched-chain amino acid aminotransferase I YPN_0068 IPR018300 Aminotransferase, class IV, conserved site YPN_0068 IPR036038 YPN_0068 YPN_0069 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPN_0069 IPR004404 Dihydroxy-acid dehydratase YPN_0069 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPN_0069 IPR037237 YPN_0069 YPN_0070 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPN_0070 IPR001721 ACT-like domain YPN_0070 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_0070 IPR005787 Threonine dehydratase, biosynthetic YPN_0070 IPR036052 YPN_0070 YPN_0070 IPR038110 YPN_0070 YPN_0071 IPR010351 Protein of unknown function DUF943 YPN_0072 IPR010351 Protein of unknown function DUF943 YPN_0073 IPR010351 Protein of unknown function DUF943 YPN_0074 IPR017483 Conserved hypothetical protein CHP03034 YPN_0076 IPR000847 Transcription regulator HTH, LysR YPN_0076 IPR005119 LysR, substrate-binding YPN_0076 IPR036388 YPN_0076 YPN_0076 IPR036390 YPN_0076 YPN_0077 IPR000506 Acetohydroxy acid isomeroreductase C-terminal YPN_0077 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_0077 IPR013023 Acetohydroxy acid isomeroreductase YPN_0077 IPR013116 Acetohydroxy acid isomeroreductase, catalytic YPN_0077 IPR013328 Dehydrogenase, multihelical YPN_0077 IPR036291 YPN_0077 YPN_0079 IPR016128 Pyosin/cloacin translocation domain YPN_0079 IPR036302 YPN_0079 YPN_0081 IPR000290 Colicin immunity protein/pyocin immunity protein YPN_0081 IPR035900 YPN_0081 YPN_0083 IPR001829 Pili assembly chaperone, bacterial YPN_0083 IPR008962 PapD-like YPN_0083 IPR013783 Immunoglobulin-like fold YPN_0083 IPR016147 PapD, N-terminal, bacterial YPN_0083 IPR016148 Pili assembly chaperone, C-terminal domain YPN_0083 IPR018046 Pili assembly chaperone, conserved site YPN_0083 IPR036316 YPN_0083 YPN_0084 IPR000259 Fimbrial-type adhesion domain YPN_0084 IPR008966 Adhesion domain YPN_0084 IPR011228 Uncharacterised conserved protein UCP029766 YPN_0084 IPR036937 YPN_0084 YPN_0085 IPR000015 Outer membrane usher protein YPN_0085 IPR018030 Fimbrial membrane usher, conserved site YPN_0085 IPR025885 PapC, N-terminal domain YPN_0085 IPR025949 PapC-like, C-terminal domain YPN_0085 IPR037224 YPN_0085 YPN_0086 IPR001829 Pili assembly chaperone, bacterial YPN_0086 IPR008962 PapD-like YPN_0086 IPR013783 Immunoglobulin-like fold YPN_0086 IPR016147 PapD, N-terminal, bacterial YPN_0086 IPR016148 Pili assembly chaperone, C-terminal domain YPN_0086 IPR036316 YPN_0086 YPN_0087 IPR008966 Adhesion domain YPN_0087 IPR036937 YPN_0087 YPN_0087 IPR039458 YPN_0087 YPN_0088 IPR001207 Transposase, mutator type YPN_0089 IPR007788 Glutamine cyclotransferase YPN_0089 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like YPN_0089 IPR015943 WD40/YVTN repeat-like-containing domain YPN_0091 IPR005752 DNA helicase, ATP-dependent, RepA type YPN_0091 IPR013986 DExx box DNA helicase domain YPN_0091 IPR014017 DNA helicase, UvrD-like, C-terminal YPN_0091 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0091 IPR034739 YPN_0091 YPN_0092 IPR003695 Ppx/GppA phosphatase YPN_0093 IPR003695 Ppx/GppA phosphatase YPN_0094 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPN_0094 IPR001650 Helicase, C-terminal YPN_0094 IPR011545 DEAD/DEAH box helicase domain YPN_0094 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_0094 IPR023554 RNA helicase, ATP-dependent, RhlB-type YPN_0094 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0095 IPR005746 Thioredoxin YPN_0095 IPR013766 Thioredoxin domain YPN_0095 IPR017937 Thioredoxin, conserved site YPN_0095 IPR036249 YPN_0095 YPN_0096 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPN_0096 IPR003593 AAA+ ATPase domain YPN_0096 IPR004665 Transcription termination factor Rho YPN_0096 IPR011112 Rho termination factor, N-terminal YPN_0096 IPR011113 Rho termination factor, RNA-binding YPN_0096 IPR011129 Cold shock protein YPN_0096 IPR012340 Nucleic acid-binding, OB-fold YPN_0096 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0096 IPR036269 YPN_0096 YPN_0097 IPR000715 Glycosyl transferase, family 4 YPN_0097 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YPN_0098 IPR003856 Lipopolysaccharide biosynthesis YPN_0098 IPR032895 YPN_0098 YPN_0099 IPR003331 UDP-N-acetylglucosamine 2-epimerase YPN_0099 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type YPN_0099 IPR032892 YPN_0099 YPN_0100 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPN_0100 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_0100 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPN_0100 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPN_0100 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPN_0100 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YPN_0100 IPR032891 YPN_0100 YPN_0100 IPR036220 YPN_0100 YPN_0100 IPR036291 YPN_0100 YPN_0101 IPR005888 dTDP-glucose 4,6-dehydratase YPN_0101 IPR016040 NAD(P)-binding domain YPN_0101 IPR036291 YPN_0101 YPN_0102 IPR005835 Nucleotidyl transferase YPN_0102 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YPN_0102 IPR029044 Nucleotide-diphospho-sugar transferases YPN_0103 IPR000182 GNAT domain YPN_0103 IPR012752 TDP-D-fucosamine acetyltransferase WecD YPN_0103 IPR016181 Acyl-CoA N-acyltransferase YPN_0104 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPN_0104 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase YPN_0104 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_0104 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_0104 IPR015424 Pyridoxal phosphate-dependent transferase YPN_0104 IPR032894 YPN_0104 YPN_0105 IPR002797 Polysaccharide biosynthesis protein YPN_0105 IPR032896 YPN_0105 YPN_0106 IPR009993 4-alpha-L-fucosyltransferase YPN_0107 IPR010691 Uncharacterised protein family WzyE YPN_0108 IPR004629 Glycosyl transferase WecB/TagA/CpsF YPN_0108 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YPN_0109 IPR002293 Amino acid/polyamine transporter I YPN_0109 IPR004840 Amino acid permease, conserved site YPN_0109 IPR004841 Amino acid permease/ SLC12A domain YPN_0110 IPR002686 Transposase IS200-like YPN_0110 IPR036515 YPN_0110 YPN_0111 IPR005254 Heme biosynthesis-associated TPR protein YPN_0111 IPR010817 HemY, N-terminal YPN_0111 IPR011990 Tetratricopeptide-like helical domain YPN_0112 IPR007470 HemX YPN_0113 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YPN_0113 IPR036108 YPN_0113 YPN_0114 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase YPN_0114 IPR022417 Porphobilinogen deaminase, N-terminal YPN_0114 IPR022418 Porphobilinogen deaminase, C-terminal YPN_0114 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YPN_0114 IPR036803 YPN_0114 YPN_0116 IPR000274 Adenylate cyclase, class-I YPN_0116 IPR024685 Adenylate cyclase class-I, N-terminal domain YPN_0116 IPR024686 Adenylate cyclase class-I, conserved site YPN_0117 IPR002908 Frataxin/CyaY YPN_0117 IPR020895 Frataxin conserved site YPN_0117 IPR036524 YPN_0117 YPN_0118 IPR032831 YPN_0118 YPN_0119 IPR001653 Diaminopimelate epimerase, DapF YPN_0119 IPR018510 Diaminopimelate epimerase, active site YPN_0120 IPR007435 Protein of unknown function DUF484 YPN_0120 IPR029016 GAF domain-like YPN_0121 IPR002104 Integrase, catalytic YPN_0121 IPR004107 Integrase, SAM-like, N-terminal YPN_0121 IPR010998 Integrase, Lambda-type, N-terminal YPN_0121 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_0121 IPR011931 Tyrosine recombinase XerC YPN_0121 IPR013762 Integrase-like, catalytic core YPN_0121 IPR023009 Tyrosine recombinase XerC/XerD YPN_0122 IPR006439 HAD hydrolase, subfamily IA YPN_0122 IPR023214 HAD-like domain YPN_0122 IPR036412 YPN_0122 YPN_0123 IPR005753 DNA helicase, ATP-dependent, UvrD type YPN_0123 IPR013986 DExx box DNA helicase domain YPN_0123 IPR014017 DNA helicase, UvrD-like, C-terminal YPN_0123 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0123 IPR034739 YPN_0123 YPN_0124 IPR001647 DNA-binding HTH domain, TetR-type YPN_0124 IPR009057 Homeodomain-like YPN_0125 IPR008322 Uncharacterised protein family UPF0261 YPN_0126 IPR009215 TIM-barrel domain, IGPS-like YPN_0126 IPR013785 Aldolase-type TIM barrel YPN_0126 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_0127 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPN_0127 IPR004488 Magnesium/cobalt transport protein CorA YPN_0128 IPR000620 Drug/metabolite transporter YPN_0128 IPR004626 RarD protein YPN_0129 IPR003736 Phenylacetic acid degradation-related domain YPN_0129 IPR006683 Thioesterase superfamily YPN_0129 IPR029069 HotDog domain YPN_0130 IPR003187 Phospholipase A1 YPN_0130 IPR036541 YPN_0130 YPN_0131 IPR001650 Helicase, C-terminal YPN_0131 IPR002121 HRDC domain YPN_0131 IPR004589 DNA helicase, ATP-dependent, RecQ type YPN_0131 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YPN_0131 IPR010997 HRDC-like YPN_0131 IPR011545 DEAD/DEAH box helicase domain YPN_0131 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_0131 IPR018982 RQC domain YPN_0131 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0131 IPR032284 YPN_0131 YPN_0131 IPR036388 YPN_0131 YPN_0132 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPN_0132 IPR004778 Homoserine/Threonine efflux protein YPN_0133 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPN_0134 IPR022742 Putative lysophospholipase YPN_0134 IPR029058 Alpha/Beta hydrolase fold YPN_0135 IPR000150 Cof protein YPN_0135 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPN_0135 IPR023214 HAD-like domain YPN_0135 IPR036412 YPN_0135 YPN_0136 IPR004954 Peptidase M60, viral enhancin protein YPN_0137 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPN_0137 IPR030395 YPN_0137 YPN_0138 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPN_0138 IPR006076 FAD dependent oxidoreductase YPN_0138 IPR007419 BFD-like [2Fe-2S]-binding domain YPN_0138 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YPN_0138 IPR036188 YPN_0138 YPN_0139 IPR003953 FAD binding domain YPN_0139 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YPN_0139 IPR036188 YPN_0139 YPN_0140 IPR004017 Cysteine-rich domain YPN_0140 IPR009051 Alpha-helical ferredoxin YPN_0140 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YPN_0140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_0140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_0141 IPR014894 Protein DcrB YPN_0141 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPN_0142 IPR003744 Protein of unknown function DUF165 YPN_0143 IPR001455 TusA-like domain YPN_0143 IPR022931 Sulphurtransferase TusA YPN_0143 IPR036868 YPN_0143 YPN_0144 IPR001757 Cation-transporting P-type ATPase YPN_0144 IPR006121 Heavy metal-associated domain, HMA YPN_0144 IPR008250 P-type ATPase, A domain YPN_0144 IPR017969 Heavy-metal-associated, conserved site YPN_0144 IPR018303 P-type ATPase, phosphorylation site YPN_0144 IPR023214 HAD-like domain YPN_0144 IPR023298 P-type ATPase, transmembrane domain YPN_0144 IPR023299 P-type ATPase, cytoplasmic domain N YPN_0144 IPR027256 Cation-transporting P-type ATPase, subfamily IB YPN_0144 IPR036163 YPN_0144 YPN_0144 IPR036412 YPN_0144 YPN_0145 IPR012506 YhhN-like YPN_0146 IPR014949 Protein of unknown function DUF1820 YPN_0147 IPR019635 Protein of unknown function DUF2500 YPN_0148 IPR009525 Protein of unknown function DUF1145 YPN_0149 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_0149 IPR004398 RNA methyltransferase, RsmD YPN_0149 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0150 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPN_0150 IPR003593 AAA+ ATPase domain YPN_0150 IPR004390 Signal-recognition particle receptor FtsY YPN_0150 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YPN_0150 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0150 IPR036225 YPN_0150 YPN_0151 IPR003439 ABC transporter-like YPN_0151 IPR003593 AAA+ ATPase domain YPN_0151 IPR005286 Cell division protein FtsE, ATP-binding YPN_0151 IPR017871 ABC transporter, conserved site YPN_0151 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0152 IPR003838 Permease FtsX-like YPN_0152 IPR004513 ABC transporter, cell division protein FtsX YPN_0153 IPR000943 RNA polymerase sigma-70 YPN_0153 IPR007627 RNA polymerase sigma-70 region 2 YPN_0153 IPR007630 RNA polymerase sigma-70 region 4 YPN_0153 IPR009042 RNA polymerase sigma-70 region 1.2 YPN_0153 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YPN_0153 IPR013324 RNA polymerase sigma factor, region 3/4 YPN_0153 IPR013325 RNA polymerase sigma factor, region 2 YPN_0153 IPR014284 RNA polymerase sigma-70 like domain YPN_0153 IPR036388 YPN_0153 YPN_0154 IPR002686 Transposase IS200-like YPN_0154 IPR036515 YPN_0154 YPN_0155 IPR000182 GNAT domain YPN_0155 IPR016181 Acyl-CoA N-acyltransferase YPN_0155 IPR032900 YPN_0155 YPN_0156 IPR000709 Leu/Ile/Val-binding protein YPN_0156 IPR028081 Leucine-binding protein domain YPN_0156 IPR028082 Periplasmic binding protein-like I YPN_0157 IPR001851 ABC transporter, permease YPN_0158 IPR001851 ABC transporter, permease YPN_0158 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPN_0159 IPR003439 ABC transporter-like YPN_0159 IPR003593 AAA+ ATPase domain YPN_0159 IPR017871 ABC transporter, conserved site YPN_0159 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0159 IPR032823 YPN_0159 YPN_0160 IPR003439 ABC transporter-like YPN_0160 IPR003593 AAA+ ATPase domain YPN_0160 IPR017871 ABC transporter, conserved site YPN_0160 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0160 IPR030660 YPN_0160 YPN_0164 IPR013783 Immunoglobulin-like fold YPN_0165 IPR008962 PapD-like YPN_0165 IPR013783 Immunoglobulin-like fold YPN_0166 IPR032636 YPN_0166 YPN_0167 IPR007540 Fimbrial major subunit, CS1-type YPN_0168 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_0168 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPN_0169 IPR000515 MetI-like domain YPN_0169 IPR035906 YPN_0169 YPN_0170 IPR000515 MetI-like domain YPN_0170 IPR035906 YPN_0170 YPN_0171 IPR003439 ABC transporter-like YPN_0171 IPR003593 AAA+ ATPase domain YPN_0171 IPR008995 Molybdate/tungstate binding, C-terminal YPN_0171 IPR013611 Transport-associated OB, type 2 YPN_0171 IPR017871 ABC transporter, conserved site YPN_0171 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0172 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPN_0172 IPR030395 YPN_0172 YPN_0173 IPR004776 Auxin efflux carrier YPN_0174 IPR000620 Drug/metabolite transporter YPN_0174 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPN_0175 IPR000847 Transcription regulator HTH, LysR YPN_0175 IPR005119 LysR, substrate-binding YPN_0175 IPR036388 YPN_0175 YPN_0175 IPR036390 YPN_0175 YPN_0176 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YPN_0176 IPR006276 Cobalamin-independent methionine synthase YPN_0176 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YPN_0176 IPR038071 YPN_0176 YPN_0177 IPR002925 Dienelactone hydrolase YPN_0177 IPR029058 Alpha/Beta hydrolase fold YPN_0178 IPR000845 Nucleoside phosphorylase domain YPN_0178 IPR010058 Uridine phosphorylase YPN_0178 IPR018016 Nucleoside phosphorylase, conserved site YPN_0178 IPR035994 YPN_0178 YPN_0179 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YPN_0179 IPR029021 Protein-tyrosine phosphatase-like YPN_0180 IPR003706 Carbon starvation protein CstA YPN_0180 IPR025299 CstA C-terminal domain YPN_0181 IPR032816 YPN_0181 YPN_0182 IPR003798 DNA recombination RmuC YPN_0183 IPR004033 UbiE/COQ5 methyltransferase YPN_0183 IPR023576 UbiE/COQ5 methyltransferase, conserved site YPN_0183 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0184 IPR003033 SCP2 sterol-binding domain YPN_0184 IPR036527 YPN_0184 YPN_0185 IPR004147 UbiB domain YPN_0185 IPR010232 Probable protein kinase UbiB YPN_0185 IPR011009 Protein kinase-like domain YPN_0186 IPR003369 Sec-independent protein translocase protein TatA/B/E YPN_0186 IPR006312 Sec-independent protein translocase protein TatA/E YPN_0187 IPR018448 Twin-arginine translocation protein TatB YPN_0188 IPR002033 Sec-independent periplasmic protein translocase TatC YPN_0188 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPN_0189 IPR001130 TatD family YPN_0189 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPN_0189 IPR032466 YPN_0189 YPN_0190 IPR001584 Integrase, catalytic core YPN_0190 IPR006120 Resolvase, HTH domain YPN_0190 IPR009057 Homeodomain-like YPN_0190 IPR012337 Ribonuclease H-like domain YPN_0191 IPR001270 ClpA/B family YPN_0191 IPR002611 IstB-like ATP-binding protein YPN_0191 IPR003593 AAA+ ATPase domain YPN_0191 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0191 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_0192 IPR001130 TatD family YPN_0192 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPN_0192 IPR032466 YPN_0192 YPN_0193 IPR001731 Porphobilinogen synthase YPN_0193 IPR013785 Aldolase-type TIM barrel YPN_0193 IPR030656 YPN_0193 YPN_0194 IPR005824 KOW YPN_0194 IPR006645 NusG, N-terminal YPN_0194 IPR010215 Transcription antitermination protein RfaH YPN_0194 IPR036735 YPN_0194 YPN_0195 IPR002830 UbiD decarboxylyase family YPN_0195 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YPN_0196 IPR001221 Phenol hydroxylase reductase YPN_0196 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_0196 IPR008333 Oxidoreductase, FAD-binding domain YPN_0196 IPR017938 Riboflavin synthase-like beta-barrel YPN_0196 IPR039261 YPN_0196 YPN_0197 IPR002155 Thiolase YPN_0197 IPR012805 Acetyl-CoA C-acyltransferase FadA YPN_0197 IPR016039 Thiolase-like YPN_0197 IPR020610 Thiolase, active site YPN_0197 IPR020613 Thiolase, conserved site YPN_0197 IPR020615 Thiolase, acyl-enzyme intermediate active site YPN_0197 IPR020616 Thiolase, N-terminal YPN_0197 IPR020617 Thiolase, C-terminal YPN_0198 IPR001753 Crotonase superfamily YPN_0198 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPN_0198 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPN_0198 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPN_0198 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_0198 IPR012799 Fatty oxidation complex, alpha subunit FadB YPN_0198 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPN_0198 IPR029045 ClpP/crotonase-like domain YPN_0198 IPR036291 YPN_0198 YPN_0199 IPR000994 Peptidase M24, structural domain YPN_0199 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPN_0199 IPR022846 Xaa-Pro dipeptidase YPN_0199 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPN_0199 IPR036005 YPN_0199 YPN_0200 IPR001498 Impact, N-terminal YPN_0200 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0200 IPR036956 YPN_0200 YPN_0201 IPR002686 Transposase IS200-like YPN_0201 IPR036515 YPN_0201 YPN_0202 IPR001498 Impact, N-terminal YPN_0202 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPN_0202 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0202 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPN_0202 IPR035647 YPN_0202 YPN_0202 IPR036956 YPN_0202 YPN_0203 IPR003445 Cation transporter YPN_0203 IPR004772 Potassium uptake protein TrkH family YPN_0204 IPR001226 Flavodoxin, conserved site YPN_0204 IPR026816 Flavodoxin domain YPN_0204 IPR029039 Flavoprotein-like YPN_0205 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YPN_0205 IPR006094 FAD linked oxidase, N-terminal YPN_0205 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YPN_0205 IPR016167 FAD-binding, type 2, subdomain 1 YPN_0205 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_0205 IPR036318 YPN_0205 YPN_0205 IPR036635 YPN_0205 YPN_0206 IPR003142 Biotin protein ligase, C-terminal YPN_0206 IPR004143 Biotin/lipoate A/B protein ligase YPN_0206 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YPN_0206 IPR004409 Biotin operon repressor, helix-turn-helix domain YPN_0206 IPR008988 Transcriptional repressor, C-terminal YPN_0206 IPR013196 Helix-turn-helix, type 11 YPN_0206 IPR030855 YPN_0206 YPN_0206 IPR036388 YPN_0206 YPN_0206 IPR036390 YPN_0206 YPN_0207 IPR004566 Bacterial pantothenate kinase YPN_0207 IPR006083 Phosphoribulokinase/uridine kinase YPN_0207 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0208 IPR000182 GNAT domain YPN_0208 IPR016181 Acyl-CoA N-acyltransferase YPN_0209 IPR001584 Integrase, catalytic core YPN_0209 IPR006120 Resolvase, HTH domain YPN_0209 IPR009057 Homeodomain-like YPN_0209 IPR012337 Ribonuclease H-like domain YPN_0210 IPR001270 ClpA/B family YPN_0210 IPR002611 IstB-like ATP-binding protein YPN_0210 IPR003593 AAA+ ATPase domain YPN_0210 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0210 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_0211 IPR000795 Elongation factor, GTP-binding domain YPN_0211 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPN_0211 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPN_0211 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPN_0211 IPR005225 Small GTP-binding protein domain YPN_0211 IPR009000 Translation protein, beta-barrel domain YPN_0211 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPN_0211 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0211 IPR031157 YPN_0211 YPN_0212 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPN_0212 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPN_0213 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit YPN_0213 IPR005807 SecE subunit of protein translocation complex YPN_0213 IPR038379 YPN_0213 YPN_0214 IPR001062 Transcription antitermination protein, NusG YPN_0214 IPR005824 KOW YPN_0214 IPR006645 NusG, N-terminal YPN_0214 IPR008991 Translation protein SH3-like domain YPN_0214 IPR014722 Ribosomal protein L2 domain 2 YPN_0214 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPN_0214 IPR036735 YPN_0214 YPN_0215 IPR000911 Ribosomal protein L11/L12 YPN_0215 IPR006519 Ribosomal protein L11, bacterial-type YPN_0215 IPR020783 Ribosomal protein L11, C-terminal YPN_0215 IPR020784 Ribosomal protein L11, N-terminal YPN_0215 IPR020785 Ribosomal protein L11, conserved site YPN_0215 IPR036769 YPN_0215 YPN_0215 IPR036796 YPN_0215 YPN_0216 IPR002143 Ribosomal protein L1 YPN_0216 IPR005878 Ribosomal protein L1, bacterial-type YPN_0216 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPN_0216 IPR023673 Ribosomal protein L1, conserved site YPN_0216 IPR023674 Ribosomal protein L1-like YPN_0216 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPN_0217 IPR001790 Ribosomal protein L10/acidic P0 YPN_0217 IPR002363 Ribosomal protein L10, eubacterial, conserved site YPN_0217 IPR022973 Ribosomal protein L10 YPN_0218 IPR000206 Ribosomal protein L7/L12 YPN_0218 IPR008932 Ribosomal protein L7/L12, oligomerisation YPN_0218 IPR013823 Ribosomal protein L7/L12, C-terminal YPN_0218 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPN_0218 IPR036235 YPN_0218 YPN_0219 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 YPN_0219 IPR007121 RNA polymerase, beta subunit, conserved site YPN_0219 IPR007641 RNA polymerase Rpb2, domain 7 YPN_0219 IPR007642 RNA polymerase Rpb2, domain 2 YPN_0219 IPR007644 RNA polymerase, beta subunit, protrusion YPN_0219 IPR007645 RNA polymerase Rpb2, domain 3 YPN_0219 IPR010243 DNA-directed RNA polymerase, beta subunit YPN_0219 IPR014724 RNA polymerase Rpb2, OB-fold YPN_0219 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YPN_0219 IPR037033 YPN_0219 YPN_0219 IPR037034 YPN_0219 YPN_0220 IPR000722 RNA polymerase, alpha subunit YPN_0220 IPR006592 RNA polymerase, N-terminal YPN_0220 IPR007066 RNA polymerase Rpb1, domain 3 YPN_0220 IPR007080 RNA polymerase Rpb1, domain 1 YPN_0220 IPR007081 RNA polymerase Rpb1, domain 5 YPN_0220 IPR007083 RNA polymerase Rpb1, domain 4 YPN_0220 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YPN_0220 IPR038120 YPN_0220 YPN_0221 IPR002686 Transposase IS200-like YPN_0221 IPR036515 YPN_0221 YPN_0222 IPR007197 Radical SAM YPN_0222 IPR010722 Biotin and thiamin synthesis-associated domain YPN_0222 IPR012726 Thiazole biosynthesis ThiH YPN_0222 IPR013785 Aldolase-type TIM barrel YPN_0223 IPR008867 Thiazole biosynthesis YPN_0223 IPR013785 Aldolase-type TIM barrel YPN_0223 IPR033983 YPN_0223 YPN_0224 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPN_0224 IPR010035 ThiS, thiamine-biosynthesis YPN_0224 IPR012675 Beta-grasp domain YPN_0224 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPN_0225 IPR000594 UBA/THIF-type NAD/FAD binding fold YPN_0225 IPR035985 YPN_0225 YPN_0226 IPR013785 Aldolase-type TIM barrel YPN_0226 IPR022998 Thiamin phosphate synthase superfamily YPN_0226 IPR034291 YPN_0226 YPN_0226 IPR036206 YPN_0226 YPN_0227 IPR002817 Thiamine biosynthesis protein ThiC YPN_0227 IPR025747 ThiC-associated domain YPN_0227 IPR037509 YPN_0227 YPN_0227 IPR038521 YPN_0227 YPN_0228 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPN_0228 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPN_0228 IPR038309 YPN_0228 YPN_0229 IPR000086 NUDIX hydrolase domain YPN_0229 IPR015376 Zinc ribbon, NADH pyrophosphatase YPN_0229 IPR015797 NUDIX hydrolase domain-like YPN_0229 IPR020084 NUDIX hydrolase, conserved site YPN_0229 IPR022925 NADH pyrophosphatase NudC YPN_0231 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YPN_0231 IPR006361 Uroporphyrinogen decarboxylase HemE YPN_0231 IPR038071 YPN_0231 YPN_0232 IPR007581 Endonuclease V YPN_0233 IPR007338 Protein of unknown function DUF416 YPN_0233 IPR023381 YP001051499.1-like domain YPN_0234 IPR000119 Histone-like bacterial DNA-binding protein YPN_0234 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPN_0234 IPR020816 Histone-like DNA-binding protein, conserved site YPN_0235 IPR010858 Protein of unknown function DUF1481 YPN_0235 IPR016500 Uncharacterised conserved protein UCP006993 YPN_0236 IPR000115 Phosphoribosylglycinamide synthetase YPN_0236 IPR011054 Rudiment single hybrid motif YPN_0236 IPR013815 ATP-grasp fold, subdomain 1 YPN_0236 IPR016185 Pre-ATP-grasp domain YPN_0236 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YPN_0236 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YPN_0236 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPN_0236 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YPN_0236 IPR037123 YPN_0236 YPN_0237 IPR002695 AICARFT/IMPCHase bienzyme YPN_0237 IPR011607 Methylglyoxal synthase-like domain YPN_0237 IPR016193 Cytidine deaminase-like YPN_0237 IPR024051 AICAR transformylase domain YPN_0237 IPR036914 YPN_0237 YPN_0238 IPR001207 Transposase, mutator type YPN_0239 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YPN_0239 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0240 IPR013482 Molybdenum cofactor guanylyltransferase YPN_0240 IPR025877 MobA-like NTP transferase domain YPN_0240 IPR029044 Nucleotide-diphospho-sugar transferases YPN_0241 IPR009383 Protein of unknown function DUF1040 YPN_0241 IPR038134 YPN_0241 YPN_0242 IPR002575 Aminoglycoside phosphotransferase YPN_0242 IPR011009 Protein kinase-like domain YPN_0242 IPR032882 YPN_0242 YPN_0243 IPR001853 DSBA-like thioredoxin domain YPN_0243 IPR017937 Thioredoxin, conserved site YPN_0243 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPN_0243 IPR036249 YPN_0243 YPN_0244 IPR001098 DNA-directed DNA polymerase, family A, palm domain YPN_0244 IPR002298 DNA polymerase A YPN_0244 IPR002421 5'-3' exonuclease, N-terminal YPN_0244 IPR002562 3'-5' exonuclease domain YPN_0244 IPR008918 Helix-hairpin-helix motif, class 2 YPN_0244 IPR012337 Ribonuclease H-like domain YPN_0244 IPR018320 DNA polymerase 1 YPN_0244 IPR019760 DNA-directed DNA polymerase, family A, conserved site YPN_0244 IPR020045 5'-3' exonuclease, C-terminal domain YPN_0244 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPN_0244 IPR029060 PIN domain-like YPN_0244 IPR036279 YPN_0244 YPN_0244 IPR036397 YPN_0244 YPN_0245 IPR002686 Transposase IS200-like YPN_0245 IPR036515 YPN_0245 YPN_0246 IPR006073 GTP binding domain YPN_0246 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YPN_0246 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0247 IPR007336 Der GTPase activator YPN_0248 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN YPN_0248 IPR006638 Elongator protein 3/MiaB/NifB YPN_0248 IPR007197 Radical SAM YPN_0248 IPR010723 HemN, C-terminal domain YPN_0248 IPR023404 Radical SAM, alpha/beta horseshoe YPN_0249 IPR001789 Signal transduction response regulator, receiver domain YPN_0249 IPR002078 RNA polymerase sigma factor 54 interaction domain YPN_0249 IPR002197 DNA binding HTH domain, Fis-type YPN_0249 IPR003593 AAA+ ATPase domain YPN_0249 IPR009057 Homeodomain-like YPN_0249 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) YPN_0249 IPR011006 CheY-like superfamily YPN_0249 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPN_0249 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPN_0249 IPR025944 Sigma-54 interaction domain, conserved site YPN_0249 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0250 IPR000014 PAS domain YPN_0250 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_0250 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_0250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_0250 IPR013767 PAS fold YPN_0250 IPR035965 YPN_0250 YPN_0250 IPR036097 YPN_0250 YPN_0250 IPR036890 YPN_0250 YPN_0251 IPR001637 Glutamine synthetase class-I, adenylation site YPN_0251 IPR004809 Glutamine synthetase type I YPN_0251 IPR008146 Glutamine synthetase, catalytic domain YPN_0251 IPR008147 Glutamine synthetase, beta-Grasp YPN_0251 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPN_0251 IPR027302 Glutamine synthetase, N-terminal conserved site YPN_0251 IPR027303 Glutamine synthetase, glycine-rich site YPN_0251 IPR036651 YPN_0251 YPN_0252 IPR000640 Translation elongation factor EFG, V domain YPN_0252 IPR000795 Elongation factor, GTP-binding domain YPN_0252 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPN_0252 IPR005225 Small GTP-binding protein domain YPN_0252 IPR006298 GTP-binding protein TypA YPN_0252 IPR009000 Translation protein, beta-barrel domain YPN_0252 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0252 IPR031157 YPN_0252 YPN_0252 IPR035647 YPN_0252 YPN_0253 IPR006439 HAD hydrolase, subfamily IA YPN_0253 IPR023198 Phosphoglycolate phosphatase, domain 2 YPN_0253 IPR023214 HAD-like domain YPN_0253 IPR036412 YPN_0253 YPN_0254 IPR017039 Virulence factor BrkB YPN_0254 IPR023679 Uncharacterised protein family UPF0761, bacterial YPN_0255 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase YPN_0255 IPR023509 D-Tyr tRNAtyr deacylase-like domain YPN_0256 IPR001270 ClpA/B family YPN_0256 IPR002611 IstB-like ATP-binding protein YPN_0256 IPR003593 AAA+ ATPase domain YPN_0256 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0256 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_0257 IPR001584 Integrase, catalytic core YPN_0257 IPR006120 Resolvase, HTH domain YPN_0257 IPR009057 Homeodomain-like YPN_0257 IPR012337 Ribonuclease H-like domain YPN_0258 IPR003593 AAA+ ATPase domain YPN_0258 IPR011704 ATPase, dynein-related, AAA domain YPN_0258 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0259 IPR019292 5-methylcytosine restriction system component YPN_0262 IPR002941 DNA methylase N-4/N-6 YPN_0262 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0263 IPR036890 YPN_0263 YPN_0267 IPR014544 Uncharacterised conserved protein UCP028408 YPN_0267 IPR024534 Domain of unknown function DUF2220 YPN_0267 IPR024537 Domain of unknown function DUF3322 YPN_0268 IPR001915 Peptidase M48 YPN_0269 IPR010295 Protein of unknown function DUF898 YPN_0271 IPR009057 Homeodomain-like YPN_0271 IPR018060 DNA binding HTH domain, AraC-type YPN_0271 IPR018062 HTH domain AraC-type, conserved site YPN_0271 IPR020449 Transcription regulator HTH, AraC- type YPN_0272 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPN_0272 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPN_0272 IPR036095 YPN_0272 YPN_0273 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPN_0273 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPN_0273 IPR036095 YPN_0273 YPN_0274 IPR003352 Phosphotransferase system, EIIC YPN_0274 IPR006327 Phosphotransferase system, fructose IIC component YPN_0275 IPR000032 Phosphocarrier HPr protein-like YPN_0275 IPR000121 PEP-utilising enzyme, C-terminal YPN_0275 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPN_0275 IPR002178 PTS EIIA type-2 domain YPN_0275 IPR006318 Phosphoenolpyruvate-utilising enzyme YPN_0275 IPR008279 PEP-utilising enzyme, mobile domain YPN_0275 IPR008731 Phosphotransferase system, enzyme I N-terminal YPN_0275 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_0275 IPR016152 Phosphotransferase/anion transporter YPN_0275 IPR018274 PEP-utilising enzyme, active site YPN_0275 IPR023151 PEP-utilising enzyme, conserved site YPN_0275 IPR035895 YPN_0275 YPN_0275 IPR036618 YPN_0275 YPN_0275 IPR036637 YPN_0275 YPN_0276 IPR019637 Protein of unknown function DUF2501 YPN_0277 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPN_0277 IPR011008 Dimeric alpha-beta barrel YPN_0277 IPR033672 YPN_0277 YPN_0278 IPR002915 DeoC/FbaB/ lacD aldolase YPN_0278 IPR013785 Aldolase-type TIM barrel YPN_0278 IPR033673 YPN_0278 YPN_0279 IPR025997 Periplasmic binding protein domain YPN_0279 IPR028082 Periplasmic binding protein-like I YPN_0280 IPR001851 ABC transporter, permease YPN_0281 IPR001851 ABC transporter, permease YPN_0282 IPR003439 ABC transporter-like YPN_0282 IPR003593 AAA+ ATPase domain YPN_0282 IPR017871 ABC transporter, conserved site YPN_0282 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0284 IPR012318 Helix-turn-helix motif, Crp-type YPN_0284 IPR036388 YPN_0284 YPN_0285 IPR007324 Sugar-binding domain, putative YPN_0285 IPR037171 YPN_0285 YPN_0286 IPR000577 YPN_0286 YPN_0286 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_0286 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_0286 IPR033676 YPN_0286 YPN_0287 IPR002201 Glycosyl transferase, family 9 YPN_0287 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YPN_0288 IPR007016 O-antigen ligase-related YPN_0289 IPR010445 Protein of unknown function DUF1049 YPN_0290 IPR003997 RTX secretion protein D, Gram-negative bacteria YPN_0290 IPR006143 RND efflux pump, membrane fusion protein YPN_0290 IPR032317 YPN_0290 YPN_0291 IPR001036 Acriflavin resistance protein YPN_0291 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPN_0294 IPR000070 Pectinesterase, catalytic YPN_0294 IPR011050 Pectin lyase fold/virulence factor YPN_0294 IPR012334 Pectin lyase fold YPN_0295 IPR000160 GGDEF domain YPN_0295 IPR029787 Nucleotide cyclase YPN_0297 IPR009885 Protein of unknown function DUF1435 YPN_0298 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_0298 IPR007848 Methyltransferase small domain YPN_0298 IPR013675 Methyltransferase small, N-terminal YPN_0298 IPR023543 rRNA small subunit methyltransferase C YPN_0298 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0299 IPR004615 DNA polymerase III, psi subunit YPN_0299 IPR036654 YPN_0299 YPN_0300 IPR000182 GNAT domain YPN_0300 IPR006464 Ribosomal-protein-alanine acetyltransferase YPN_0300 IPR016181 Acyl-CoA N-acyltransferase YPN_0301 IPR000795 Elongation factor, GTP-binding domain YPN_0301 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPN_0301 IPR004548 Peptide chain release factor 3 YPN_0301 IPR005225 Small GTP-binding protein domain YPN_0301 IPR009000 Translation protein, beta-barrel domain YPN_0301 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0301 IPR031157 YPN_0301 YPN_0301 IPR032090 YPN_0301 YPN_0301 IPR035647 YPN_0301 YPN_0301 IPR038467 YPN_0301 YPN_0302 IPR007055 BON domain YPN_0302 IPR014004 Transport-associated and nodulation domain, bacteria YPN_0303 IPR009760 Protein of unknown function DUF1328 YPN_0304 IPR002641 Patatin/Phospholipase A2-related YPN_0304 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPN_0305 IPR001130 TatD family YPN_0305 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPN_0305 IPR032466 YPN_0305 YPN_0306 IPR002668 Concentrative nucleoside transporter N-terminal domain YPN_0306 IPR011642 Nucleoside recognition Gate YPN_0306 IPR011657 Concentrative nucleoside transporter C-terminal domain YPN_0306 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPN_0307 IPR002915 DeoC/FbaB/ lacD aldolase YPN_0307 IPR011343 Deoxyribose-phosphate aldolase YPN_0307 IPR013785 Aldolase-type TIM barrel YPN_0307 IPR023649 Deoxyribose-phosphate aldolase type II YPN_0308 IPR000312 Glycosyl transferase, family 3 YPN_0308 IPR017459 Glycosyl transferase family 3, N-terminal domain YPN_0308 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site YPN_0308 IPR035902 YPN_0308 YPN_0308 IPR036320 YPN_0308 YPN_0309 IPR000312 Glycosyl transferase, family 3 YPN_0309 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal YPN_0309 IPR035902 YPN_0309 YPN_0309 IPR036566 YPN_0309 YPN_0310 IPR006124 Metalloenzyme YPN_0310 IPR010045 Phosphopentomutase YPN_0310 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_0310 IPR017850 Alkaline-phosphatase-like, core domain YPN_0310 IPR024052 Phosphopentomutase DeoB cap domain YPN_0311 IPR000845 Nucleoside phosphorylase domain YPN_0311 IPR004402 Purine nucleoside phosphorylase DeoD-type YPN_0311 IPR018016 Nucleoside phosphorylase, conserved site YPN_0311 IPR035994 YPN_0311 YPN_0312 IPR019305 Uncharacterised protein family Smp YPN_0313 IPR023190 Phosphoserine phosphatase, domain 2 YPN_0313 IPR023214 HAD-like domain YPN_0313 IPR036412 YPN_0313 YPN_0314 IPR003593 AAA+ ATPase domain YPN_0314 IPR004504 DNA repair protein RadA YPN_0314 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_0314 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0314 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0315 IPR001387 Cro/C1-type helix-turn-helix domain YPN_0315 IPR004821 Cytidyltransferase-like domain YPN_0315 IPR006417 Nicotinamide-nucleotide adenylyltransferase YPN_0315 IPR010982 Lambda repressor-like, DNA-binding domain YPN_0315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0315 IPR016429 Bifunctional transcriptional regulator NadR YPN_0315 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0315 IPR038727 YPN_0315 YPN_0316 IPR003812 Fido domain YPN_0316 IPR025230 Domain of unknown function DUF4172 YPN_0316 IPR036388 YPN_0316 YPN_0316 IPR036597 YPN_0316 YPN_0317 IPR003439 ABC transporter-like YPN_0317 IPR003593 AAA+ ATPase domain YPN_0317 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0317 IPR032781 YPN_0317 YPN_0318 IPR003439 ABC transporter-like YPN_0318 IPR017871 ABC transporter, conserved site YPN_0318 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0319 IPR006664 Outer membrane protein, bacterial YPN_0319 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_0319 IPR036737 YPN_0319 YPN_0320 IPR000160 GGDEF domain YPN_0320 IPR029787 Nucleotide cyclase YPN_0320 IPR033417 YPN_0320 YPN_0321 IPR025293 Protein of unknown function DUF4154 YPN_0322 IPR001757 Cation-transporting P-type ATPase YPN_0322 IPR004014 Cation-transporting P-type ATPase, N-terminal YPN_0322 IPR006068 Cation-transporting P-type ATPase, C-terminal YPN_0322 IPR008250 P-type ATPase, A domain YPN_0322 IPR018303 P-type ATPase, phosphorylation site YPN_0322 IPR023214 HAD-like domain YPN_0322 IPR023298 P-type ATPase, transmembrane domain YPN_0322 IPR023299 P-type ATPase, cytoplasmic domain N YPN_0322 IPR036412 YPN_0322 YPN_0323 IPR000189 Prokaryotic transglycosylase, active site YPN_0323 IPR008258 Lytic transglycosylase-like SLT domain YPN_0323 IPR008939 Lytic transglycosylase, superhelical U-shaped YPN_0323 IPR012289 Lytic transglycosylase, superhelical linker YPN_0323 IPR023346 Lysozyme-like domain YPN_0323 IPR037061 YPN_0323 YPN_0324 IPR000831 Trp repressor YPN_0324 IPR010921 Trp repressor/replication initiator YPN_0324 IPR013335 Trp repressor, bacterial YPN_0324 IPR038116 YPN_0324 YPN_0325 IPR002786 Non-canonical purine NTP phosphatase YPN_0325 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPN_0325 IPR029001 Inosine triphosphate pyrophosphatase-like YPN_0326 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPN_0326 IPR013078 Histidine phosphatase superfamily, clade-1 YPN_0326 IPR023086 Phosphoglycerate mutase, GpmB, probable YPN_0326 IPR029033 Histidine phosphatase superfamily YPN_0327 IPR009057 Homeodomain-like YPN_0327 IPR010499 Bacterial transcription activator, effector binding YPN_0327 IPR011256 Regulatory factor, effector binding domain YPN_0327 IPR018060 DNA binding HTH domain, AraC-type YPN_0327 IPR018062 HTH domain AraC-type, conserved site YPN_0327 IPR020449 Transcription regulator HTH, AraC- type YPN_0327 IPR029442 GyrI-like small molecule binding domain YPN_0328 IPR010292 Uncharacterised protein family CreA YPN_0329 IPR001789 Signal transduction response regulator, receiver domain YPN_0329 IPR001867 Signal transduction response regulator, C-terminal YPN_0329 IPR011006 CheY-like superfamily YPN_0329 IPR016032 Signal transduction response regulator, C-terminal effector YPN_0329 IPR036388 YPN_0329 YPN_0331 IPR001048 Aspartate/glutamate/uridylate kinase YPN_0331 IPR001341 Aspartate kinase domain YPN_0331 IPR001342 Homoserine dehydrogenase, catalytic YPN_0331 IPR002912 ACT domain YPN_0331 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPN_0331 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPN_0331 IPR018042 Aspartate kinase, conserved site YPN_0331 IPR019811 Homoserine dehydrogenase, conserved site YPN_0331 IPR027795 GATS-like ACT domain YPN_0331 IPR036291 YPN_0331 YPN_0331 IPR036393 YPN_0331 YPN_0332 IPR000870 Homoserine kinase YPN_0332 IPR006203 GHMP kinase, ATP-binding, conserved site YPN_0332 IPR006204 GHMP kinase N-terminal domain YPN_0332 IPR013750 GHMP kinase, C-terminal domain YPN_0332 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_0332 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0332 IPR036554 YPN_0332 YPN_0333 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPN_0333 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_0333 IPR004450 Threonine synthase-like YPN_0333 IPR029144 Threonine synthase, N-terminal YPN_0333 IPR036052 YPN_0333 YPN_0333 IPR037158 YPN_0333 YPN_0334 IPR005583 Uncharacterised protein family UPF0246 YPN_0335 IPR001585 Transaldolase YPN_0335 IPR004730 Transaldolase type 1 YPN_0335 IPR013785 Aldolase-type TIM barrel YPN_0335 IPR018225 Transaldolase, active site YPN_0337 IPR001453 Molybdopterin binding domain YPN_0337 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPN_0337 IPR036425 YPN_0337 YPN_0338 IPR011701 Major facilitator superfamily YPN_0338 IPR036259 YPN_0338 YPN_0339 IPR011024 Gamma-crystallin-related YPN_0339 IPR016181 Acyl-CoA N-acyltransferase YPN_0340 IPR000791 GPR1/FUN34/yaaH YPN_0341 IPR012725 Chaperone DnaK YPN_0341 IPR013126 Heat shock protein 70 family YPN_0341 IPR018181 Heat shock protein 70, conserved site YPN_0341 IPR029047 Heat shock protein 70kD, peptide-binding domain YPN_0341 IPR029048 Heat shock protein 70kD, C-terminal domain YPN_0342 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YPN_0342 IPR001623 DnaJ domain YPN_0342 IPR002939 Chaperone DnaJ, C-terminal YPN_0342 IPR008971 HSP40/DnaJ peptide-binding YPN_0342 IPR012724 Chaperone DnaJ YPN_0342 IPR018253 DnaJ domain, conserved site YPN_0342 IPR036410 YPN_0342 YPN_0342 IPR036869 YPN_0342 YPN_0343 IPR004670 Na+/H+ antiporter NhaA YPN_0343 IPR023171 Na/H antiporter domain YPN_0344 IPR000847 Transcription regulator HTH, LysR YPN_0344 IPR005119 LysR, substrate-binding YPN_0344 IPR036388 YPN_0344 YPN_0344 IPR036390 YPN_0344 YPN_0345 IPR002583 Ribosomal protein S20 YPN_0345 IPR036510 YPN_0345 YPN_0346 IPR002606 Riboflavin kinase, bacterial YPN_0346 IPR004821 Cytidyltransferase-like domain YPN_0346 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0346 IPR015864 FAD synthetase YPN_0346 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YPN_0346 IPR023465 Riboflavin kinase domain YPN_0347 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_0347 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPN_0347 IPR002301 Isoleucine-tRNA ligase YPN_0347 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPN_0347 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPN_0347 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YPN_0347 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPN_0347 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0347 IPR023585 Isoleucine-tRNA ligase, type 1 YPN_0348 IPR001872 Peptidase A8, signal peptidase II YPN_0349 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPN_0350 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPN_0352 IPR002686 Transposase IS200-like YPN_0352 IPR036515 YPN_0352 YPN_0353 IPR000846 Dihydrodipicolinate reductase, N-terminal YPN_0353 IPR022663 Dihydrodipicolinate reductase, C-terminal YPN_0353 IPR022664 Dihydrodipicolinate reductase, conserved site YPN_0353 IPR023940 Dihydrodipicolinate reductase, bacterial YPN_0353 IPR036291 YPN_0353 YPN_0354 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain YPN_0354 IPR006274 Carbamoyl-phosphate synthase, small subunit YPN_0354 IPR017926 Glutamine amidotransferase YPN_0354 IPR029062 Class I glutamine amidotransferase-like YPN_0354 IPR036480 YPN_0354 YPN_0355 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPN_0355 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YPN_0355 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YPN_0355 IPR006275 Carbamoyl-phosphate synthase, large subunit YPN_0355 IPR011607 Methylglyoxal synthase-like domain YPN_0355 IPR016185 Pre-ATP-grasp domain YPN_0355 IPR036897 YPN_0355 YPN_0355 IPR036914 YPN_0355 YPN_0356 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPN_0357 IPR010619 Domain of unknown function DUF1212 YPN_0358 IPR024528 Domain of unknown function DUF3815 YPN_0359 IPR001796 Dihydrofolate reductase domain YPN_0359 IPR012259 Dihydrofolate reductase YPN_0359 IPR017925 Dihydrofolate reductase conserved site YPN_0359 IPR024072 Dihydrofolate reductase-like domain YPN_0360 IPR002686 Transposase IS200-like YPN_0360 IPR036515 YPN_0360 YPN_0362 IPR022231 Protein of unknown function DUF3757 YPN_0363 IPR022231 Protein of unknown function DUF3757 YPN_0364 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YPN_0364 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPN_0364 IPR029052 Metallo-dependent phosphatase-like YPN_0365 IPR007474 ApaG domain YPN_0365 IPR023065 Uncharacterised protein family ApaG YPN_0365 IPR036767 YPN_0365 YPN_0366 IPR001737 Ribosomal RNA adenine methylase transferase YPN_0366 IPR011530 Ribosomal RNA adenine dimethylase YPN_0366 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YPN_0366 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YPN_0366 IPR023165 rRNA adenine dimethylase-like YPN_0366 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0367 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA YPN_0367 IPR037510 YPN_0367 YPN_0368 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPN_0368 IPR015391 SurA N-terminal YPN_0368 IPR023034 Peptidyl-prolyl isomerase SurA YPN_0368 IPR027304 Trigger factor/SurA domain YPN_0369 IPR005653 Organic solvent tolerance-like, N-terminal YPN_0369 IPR007543 Organic solvent tolerance protein, C-terminal YPN_0369 IPR020889 Lipopolysaccharide assembly, LptD YPN_0370 IPR001623 DnaJ domain YPN_0370 IPR007791 Heat shock protein DnaJ-like protein DjlA YPN_0370 IPR023749 DnaJ-like protein DjlA YPN_0370 IPR029024 TerB-like YPN_0370 IPR036869 YPN_0370 YPN_0371 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPN_0371 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPN_0371 IPR020103 Pseudouridine synthase, catalytic domain YPN_0373 IPR018754 Protein of unknown function DUF2285 YPN_0374 IPR010657 ImpA, N-terminal YPN_0375 IPR008312 Uncharacterised conserved protein UCP028301 YPN_0376 IPR010269 Protein of unknown function DUF877 YPN_0377 IPR008514 Type VI secretion system effector, Hcp YPN_0377 IPR036624 YPN_0377 YPN_0378 IPR007048 GpW/Gp25/anti-adapter protein IraD YPN_0379 IPR010272 Type VI secretion system, VCA0110 YPN_0380 IPR010732 Protein of unknown function DUF1305 YPN_0381 IPR001270 ClpA/B family YPN_0381 IPR003593 AAA+ ATPase domain YPN_0381 IPR003959 ATPase, AAA-type, core YPN_0381 IPR004176 Clp, N-terminal YPN_0381 IPR017729 Type VI secretion system, ATPase ClpV1 YPN_0381 IPR019489 Clp ATPase, C-terminal YPN_0381 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0381 IPR036628 YPN_0381 YPN_0382 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPN_0382 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPN_0382 IPR037026 YPN_0382 YPN_0383 IPR001646 Pentapeptide repeat YPN_0383 IPR018683 Domain of unknown function DUF2169 YPN_0384 IPR001646 Pentapeptide repeat YPN_0385 IPR021927 Protein of unknown function DUF3540 YPN_0386 IPR025425 Domain of unknown function DUF4150 YPN_0387 IPR017734 Type VI secretion system, lipoprotein SciN YPN_0387 IPR038706 YPN_0387 YPN_0388 IPR010263 Protein of unknown function DUF876 YPN_0389 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_0389 IPR017732 Type IV / VI secretion system, DotU YPN_0389 IPR036737 YPN_0389 YPN_0389 IPR038522 YPN_0389 YPN_0390 IPR009612 ImcF-related YPN_0390 IPR010623 Domain of unknown function DUF1215 YPN_0390 IPR017731 Type VI secretion system, IcmF YPN_0390 IPR025743 ImcF-related, N-terminal domain YPN_0390 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0392 IPR000330 SNF2-related YPN_0392 IPR001650 Helicase, C-terminal YPN_0392 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_0392 IPR022737 RNA polymerase recycling, bacterial, C-terminal YPN_0392 IPR023949 RNA polymerase-associated protein RapA YPN_0392 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0392 IPR038718 YPN_0392 YPN_0393 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YPN_0393 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YPN_0393 IPR006172 DNA-directed DNA polymerase, family B YPN_0393 IPR012337 Ribonuclease H-like domain YPN_0393 IPR017964 DNA-directed DNA polymerase, family B, conserved site YPN_0393 IPR023211 DNA polymerase, palm domain YPN_0393 IPR036397 YPN_0393 YPN_0394 IPR032816 YPN_0394 YPN_0395 IPR003439 ABC transporter-like YPN_0395 IPR003593 AAA+ ATPase domain YPN_0395 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YPN_0395 IPR017871 ABC transporter, conserved site YPN_0395 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0396 IPR000515 MetI-like domain YPN_0396 IPR005947 Thiamine ABC transporter, permease protein YPN_0396 IPR035906 YPN_0396 YPN_0397 IPR005948 Thiamine ABC transporter periplasmic binding protein YPN_0397 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein YPN_0398 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_0398 IPR023767 Transcriptional regulator SgrR YPN_0398 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPN_0398 IPR036390 YPN_0398 YPN_0399 IPR004750 Sugar efflux YPN_0399 IPR011701 Major facilitator superfamily YPN_0399 IPR036259 YPN_0399 YPN_0400 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YPN_0400 IPR004431 3-isopropylmalate dehydratase, small subunit YPN_0400 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPN_0401 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPN_0401 IPR004430 3-isopropylmalate dehydratase, large subunit YPN_0401 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPN_0401 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPN_0401 IPR036008 YPN_0401 YPN_0402 IPR004429 Isopropylmalate dehydrogenase YPN_0402 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPN_0402 IPR024084 Isopropylmalate dehydrogenase-like domain YPN_0403 IPR000891 Pyruvate carboxyltransferase YPN_0403 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YPN_0403 IPR005671 2-isopropylmalate synthase, bacterial-type YPN_0403 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YPN_0403 IPR013785 Aldolase-type TIM barrel YPN_0403 IPR036230 YPN_0403 YPN_0404 IPR002686 Transposase IS200-like YPN_0404 IPR036515 YPN_0404 YPN_0405 IPR000847 Transcription regulator HTH, LysR YPN_0405 IPR005119 LysR, substrate-binding YPN_0405 IPR036388 YPN_0405 YPN_0405 IPR036390 YPN_0405 YPN_0406 IPR000873 AMP-dependent synthetase/ligase YPN_0406 IPR020845 AMP-binding, conserved site YPN_0407 IPR000399 TPP-binding enzyme, conserved site YPN_0407 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPN_0407 IPR012000 Thiamine pyrophosphate enzyme, central domain YPN_0407 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPN_0407 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPN_0407 IPR029035 DHS-like NAD/FAD-binding domain YPN_0407 IPR029061 Thiamin diphosphate-binding fold YPN_0408 IPR002912 ACT domain YPN_0408 IPR004789 Acetolactate synthase, small subunit YPN_0408 IPR019455 Acetolactate synthase, small subunit, C-terminal YPN_0408 IPR027271 YPN_0408 YPN_0409 IPR002686 Transposase IS200-like YPN_0409 IPR036515 YPN_0409 YPN_0410 IPR000843 Transcription regulator HTH, LacI YPN_0410 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPN_0410 IPR010982 Lambda repressor-like, DNA-binding domain YPN_0410 IPR012781 D-fructose-responsive transcription factor YPN_0410 IPR028082 Periplasmic binding protein-like I YPN_0411 IPR010574 L-alanine exporter AlaE YPN_0412 IPR003444 MraZ YPN_0412 IPR020603 MraZ domain YPN_0412 IPR037914 YPN_0412 YPN_0412 IPR038619 YPN_0412 YPN_0413 IPR002903 Ribosomal RNA small subunit methyltransferase H YPN_0413 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain YPN_0413 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0414 IPR011922 Cell division protein FtsL YPN_0415 IPR001460 Penicillin-binding protein, transpeptidase YPN_0415 IPR005311 Penicillin-binding protein, dimerisation domain YPN_0415 IPR012338 Beta-lactamase/transpeptidase-like YPN_0415 IPR036138 YPN_0415 YPN_0415 IPR037532 YPN_0415 YPN_0416 IPR000713 Mur ligase, N-terminal YPN_0416 IPR004101 Mur ligase, C-terminal YPN_0416 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YPN_0416 IPR013221 Mur ligase, central YPN_0416 IPR035911 YPN_0416 YPN_0416 IPR036565 YPN_0416 YPN_0416 IPR036615 YPN_0416 YPN_0417 IPR000713 Mur ligase, N-terminal YPN_0417 IPR004101 Mur ligase, C-terminal YPN_0417 IPR005863 UDP-MurNAc-pentapeptide synthetase YPN_0417 IPR013221 Mur ligase, central YPN_0417 IPR035911 YPN_0417 YPN_0417 IPR036565 YPN_0417 YPN_0417 IPR036615 YPN_0417 YPN_0418 IPR000715 Glycosyl transferase, family 4 YPN_0418 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YPN_0418 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YPN_0419 IPR004101 Mur ligase, C-terminal YPN_0419 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YPN_0419 IPR013221 Mur ligase, central YPN_0419 IPR036565 YPN_0419 YPN_0419 IPR036615 YPN_0419 YPN_0420 IPR001182 Cell cycle protein FtsW/RodA YPN_0420 IPR013437 Cell division protein FtsW YPN_0420 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPN_0421 IPR004276 Glycosyl transferase, family 28 YPN_0421 IPR006009 N-acetylglucosaminyltransferase, MurG YPN_0421 IPR007235 Glycosyl transferase, family 28, C-terminal YPN_0422 IPR000713 Mur ligase, N-terminal YPN_0422 IPR004101 Mur ligase, C-terminal YPN_0422 IPR005758 UDP-N-acetylmuramate-alanine ligase YPN_0422 IPR013221 Mur ligase, central YPN_0422 IPR036565 YPN_0422 YPN_0422 IPR036615 YPN_0422 YPN_0423 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YPN_0423 IPR005905 D-alanine--D-alanine ligase YPN_0423 IPR011095 D-alanine--D-alanine ligase, C-terminal YPN_0423 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YPN_0423 IPR013815 ATP-grasp fold, subdomain 1 YPN_0423 IPR016185 Pre-ATP-grasp domain YPN_0424 IPR005548 Cell division protein FtsQ/DivIB YPN_0424 IPR013685 Polypeptide-transport-associated, FtsQ-type YPN_0424 IPR026579 Cell division protein FtsQ YPN_0425 IPR003494 SHS2 domain inserted in FtsA YPN_0425 IPR020823 Cell division protein FtsA YPN_0426 IPR000158 Cell division protein FtsZ YPN_0426 IPR003008 Tubulin/FtsZ, GTPase domain YPN_0426 IPR008280 Tubulin/FtsZ, C-terminal YPN_0426 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPN_0426 IPR020805 Cell division protein FtsZ, conserved site YPN_0426 IPR024757 Cell division protein FtsZ, C-terminal YPN_0426 IPR036525 YPN_0426 YPN_0427 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YPN_0427 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YPN_0427 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YPN_0427 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0428 IPR007922 Protein of unknown function DUF721/UPF0232 YPN_0429 IPR009502 Secretion monitor YPN_0430 IPR000185 Protein translocase subunit SecA YPN_0430 IPR004027 SEC-C motif YPN_0430 IPR011115 SecA DEAD-like, N-terminal YPN_0430 IPR011116 SecA Wing/Scaffold YPN_0430 IPR011130 SecA preprotein, cross-linking domain YPN_0430 IPR020937 SecA conserved site YPN_0430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0430 IPR036266 YPN_0430 YPN_0430 IPR036670 YPN_0430 YPN_0431 IPR000086 NUDIX hydrolase domain YPN_0431 IPR003561 Mutator MutT YPN_0431 IPR015797 NUDIX hydrolase domain-like YPN_0431 IPR020084 NUDIX hydrolase, conserved site YPN_0431 IPR020476 NUDIX hydrolase YPN_0433 IPR001270 ClpA/B family YPN_0433 IPR002611 IstB-like ATP-binding protein YPN_0433 IPR003593 AAA+ ATPase domain YPN_0433 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0433 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_0434 IPR001584 Integrase, catalytic core YPN_0434 IPR006120 Resolvase, HTH domain YPN_0434 IPR009057 Homeodomain-like YPN_0434 IPR012337 Ribonuclease H-like domain YPN_0436 IPR032808 YPN_0436 YPN_0437 IPR025612 YqjK-like protein YPN_0438 IPR009937 Protein of unknown function DUF1469 YPN_0439 IPR010279 Protein of unknown function DUF883, ElaB YPN_0441 IPR009468 Protein of unknown function DUF1090 YPN_0442 IPR026574 Modulator protein MzrA YPN_0442 IPR027398 SecD export protein N-terminal TM domain YPN_0443 IPR032816 YPN_0443 YPN_0445 IPR000524 Transcription regulator HTH, GntR YPN_0445 IPR008920 Transcription regulator FadR/GntR, C-terminal YPN_0445 IPR011711 GntR, C-terminal YPN_0445 IPR036388 YPN_0445 YPN_0445 IPR036390 YPN_0445 YPN_0446 IPR000849 Sugar phosphate transporter YPN_0446 IPR011701 Major facilitator superfamily YPN_0446 IPR036259 YPN_0446 YPN_0447 IPR003766 Uronate isomerase YPN_0447 IPR032466 YPN_0447 YPN_0448 IPR003766 Uronate isomerase YPN_0448 IPR032466 YPN_0448 YPN_0449 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_0449 IPR013118 Mannitol dehydrogenase, C-terminal YPN_0449 IPR013131 Mannitol dehydrogenase, N-terminal YPN_0449 IPR013328 Dehydrogenase, multihelical YPN_0449 IPR023668 Altronate oxidoreductase YPN_0449 IPR036291 YPN_0449 YPN_0450 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal YPN_0450 IPR013974 SAF domain YPN_0451 IPR019629 Uncharacterised protein family HI1736/YgjV YPN_0451 IPR026267 Inner membrane protein YgjV YPN_0452 IPR002686 Transposase IS200-like YPN_0452 IPR036515 YPN_0452 YPN_0453 IPR001991 Sodium:dicarboxylate symporter YPN_0453 IPR023025 Serine/threonine transporter SstT YPN_0453 IPR036458 YPN_0453 YPN_0454 IPR000683 Oxidoreductase, N-terminal YPN_0454 IPR036291 YPN_0454 YPN_0455 IPR002725 Protein of unknown function DUF45 YPN_0456 IPR004899 Pertactin, central region YPN_0456 IPR005546 Autotransporter beta-domain YPN_0456 IPR006315 Outer membrane autotransporter barrel YPN_0456 IPR011050 Pectin lyase fold/virulence factor YPN_0456 IPR012332 P22 tailspike C-terminal domain-like YPN_0456 IPR036709 YPN_0456 YPN_0457 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_0457 IPR007848 Methyltransferase small domain YPN_0457 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YPN_0457 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0458 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPN_0458 IPR013785 Aldolase-type TIM barrel YPN_0458 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_0458 IPR036188 YPN_0458 YPN_0459 IPR005325 Protein of unknown function DUF308, membrane YPN_0460 IPR000719 Protein kinase domain YPN_0460 IPR008266 Tyrosine-protein kinase, active site YPN_0460 IPR011009 Protein kinase-like domain YPN_0461 IPR036457 YPN_0461 YPN_0462 IPR002035 von Willebrand factor, type A YPN_0462 IPR028274 TerY-C metal binding domain YPN_0462 IPR036465 YPN_0462 YPN_0463 IPR002035 von Willebrand factor, type A YPN_0463 IPR011392 Tellurite resistance, TerY YPN_0463 IPR036465 YPN_0463 YPN_0464 IPR003325 TerD domain YPN_0465 IPR002035 von Willebrand factor, type A YPN_0465 IPR011392 Tellurite resistance, TerY YPN_0465 IPR036465 YPN_0465 YPN_0466 IPR005565 Haemolysin activator HlyB YPN_0466 IPR013686 Polypeptide-transport-associated, ShlB-type YPN_0466 IPR027282 Two partner secretion pathway transporter YPN_0466 IPR035251 YPN_0466 YPN_0467 IPR008619 Filamentous haemagglutinin repeat YPN_0467 IPR008638 Filamentous haemagglutinin, N-terminal YPN_0467 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPN_0467 IPR011050 Pectin lyase fold/virulence factor YPN_0467 IPR012334 Pectin lyase fold YPN_0467 IPR024973 ESPR domain YPN_0469 IPR005546 Autotransporter beta-domain YPN_0469 IPR036709 YPN_0469 YPN_0470 IPR025737 MetA-pathway of phenol degradation, putative YPN_0471 IPR019282 Domain of unknown function DUF2329 YPN_0472 IPR003439 ABC transporter-like YPN_0472 IPR003593 AAA+ ATPase domain YPN_0472 IPR008995 Molybdate/tungstate binding, C-terminal YPN_0472 IPR013611 Transport-associated OB, type 2 YPN_0472 IPR017871 ABC transporter, conserved site YPN_0472 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0473 IPR008928 Six-hairpin glycosidase-like YPN_0473 IPR012341 Six-hairpin glycosidase YPN_0474 IPR000843 Transcription regulator HTH, LacI YPN_0474 IPR010982 Lambda repressor-like, DNA-binding domain YPN_0474 IPR028082 Periplasmic binding protein-like I YPN_0475 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_0476 IPR000515 MetI-like domain YPN_0476 IPR035906 YPN_0476 YPN_0477 IPR000515 MetI-like domain YPN_0477 IPR035906 YPN_0477 YPN_0479 IPR001764 Glycoside hydrolase, family 3, N-terminal YPN_0479 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPN_0479 IPR013783 Immunoglobulin-like fold YPN_0479 IPR017853 Glycoside hydrolase, superfamily YPN_0479 IPR026891 Fibronectin type III-like domain YPN_0479 IPR036881 YPN_0479 YPN_0479 IPR036962 YPN_0479 YPN_0480 IPR003423 Outer membrane efflux protein YPN_0480 IPR028351 Cyclolysin transport protein CyaE YPN_0481 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPN_0482 IPR039562 YPN_0482 YPN_0483 IPR031381 YPN_0483 YPN_0485 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPN_0485 IPR004839 Aminotransferase, class I/classII YPN_0485 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_0485 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_0485 IPR015424 Pyridoxal phosphate-dependent transferase YPN_0486 IPR018461 Na+/H+ antiporter, NhaC-like YPN_0487 IPR019587 Polyketide cyclase/dehydrase YPN_0487 IPR023393 START-like domain YPN_0489 IPR013559 YheO-like YPN_0490 IPR006056 Enamine/imine deaminase YjgF-like YPN_0490 IPR006175 YjgF/Yer057p/UK114 family YPN_0490 IPR019897 YjgF-like protein, conserved site YPN_0490 IPR035959 YPN_0490 YPN_0491 IPR006175 YjgF/Yer057p/UK114 family YPN_0491 IPR035959 YPN_0491 YPN_0492 IPR011008 Dimeric alpha-beta barrel YPN_0492 IPR014910 Mono-oxygenase, YdhR YPN_0493 IPR036249 YPN_0493 YPN_0494 IPR000847 Transcription regulator HTH, LysR YPN_0494 IPR005119 LysR, substrate-binding YPN_0494 IPR036388 YPN_0494 YPN_0494 IPR036390 YPN_0494 YPN_0495 IPR036597 YPN_0495 YPN_0496 IPR003812 Fido domain YPN_0496 IPR036597 YPN_0496 YPN_0498 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type YPN_0501 IPR005335 Terminase small subunit YPN_0501 IPR038713 YPN_0501 YPN_0503 IPR000943 RNA polymerase sigma-70 YPN_0503 IPR007127 RNA polymerase sigma factor 70, region 1.1 YPN_0503 IPR007624 RNA polymerase sigma-70 region 3 YPN_0503 IPR007627 RNA polymerase sigma-70 region 2 YPN_0503 IPR007630 RNA polymerase sigma-70 region 4 YPN_0503 IPR007631 RNA polymerase sigma factor 70, non-essential domain YPN_0503 IPR009042 RNA polymerase sigma-70 region 1.2 YPN_0503 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YPN_0503 IPR013324 RNA polymerase sigma factor, region 3/4 YPN_0503 IPR013325 RNA polymerase sigma factor, region 2 YPN_0503 IPR014284 RNA polymerase sigma-70 like domain YPN_0503 IPR028630 RNA polymerase sigma factor RpoD YPN_0503 IPR036388 YPN_0503 YPN_0504 IPR002694 Zinc finger, CHC2-type YPN_0504 IPR006171 Toprim domain YPN_0504 IPR006295 DNA primase, DnaG YPN_0504 IPR013173 DNA primase DnaG, DnaB-binding domain YPN_0504 IPR013264 DNA primase, catalytic core, N-terminal YPN_0504 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPN_0504 IPR019475 DNA primase, DnaB-helicase binding domain YPN_0504 IPR030846 YPN_0504 YPN_0504 IPR036977 YPN_0504 YPN_0504 IPR037068 YPN_0504 YPN_0505 IPR001911 Ribosomal protein S21 YPN_0505 IPR018278 Ribosomal protein S21, conserved site YPN_0505 IPR038380 YPN_0505 YPN_0506 IPR000905 Gcp-like domain YPN_0506 IPR017860 Peptidase M22, conserved site YPN_0506 IPR017861 Kae1/YgjD family YPN_0506 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YPN_0507 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YPN_0508 IPR006156 Dihydroneopterin aldolase YPN_0508 IPR006157 Dihydroneopterin aldolase/epimerase domain YPN_0509 IPR003824 Undecaprenyl-diphosphatase UppP YPN_0510 IPR002646 Poly A polymerase, head domain YPN_0510 IPR003607 HD/PDEase domain YPN_0510 IPR006674 HD domain YPN_0510 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPN_0510 IPR032828 YPN_0510 YPN_0511 IPR003646 SH3-like domain, bacterial-type YPN_0511 IPR016476 SH3 domain protein YPN_0512 IPR023577 CYTH-like domain YPN_0512 IPR033469 YPN_0512 YPN_0513 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YPN_0513 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPN_0513 IPR023057 Glutamate-ammonia-ligase adenylyltransferase YPN_0514 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPN_0514 IPR004821 Cytidyltransferase-like domain YPN_0514 IPR011611 Carbohydrate kinase PfkB YPN_0514 IPR011913 RfaE bifunctional protein, domain I YPN_0514 IPR011914 RfaE bifunctional protein, domain II YPN_0514 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0514 IPR023030 Bifunctional protein HldE YPN_0514 IPR029056 Ribokinase-like YPN_0515 IPR002293 Amino acid/polyamine transporter I YPN_0516 IPR007475 Membrane fusogenic activity YPN_0517 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YPN_0517 IPR017945 DHBP synthase RibB-like alpha/beta domain YPN_0518 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPN_0518 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type YPN_0519 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPN_0519 IPR016185 Pre-ATP-grasp domain YPN_0520 IPR009576 Biofilm formation YgiB YPN_0521 IPR003423 Outer membrane efflux protein YPN_0521 IPR010130 Type I secretion outer membrane protein, TolC YPN_0522 IPR000086 NUDIX hydrolase domain YPN_0522 IPR004385 Nucleoside diphosphate pyrophosphatase YPN_0522 IPR015797 NUDIX hydrolase domain-like YPN_0522 IPR020084 NUDIX hydrolase, conserved site YPN_0523 IPR009659 Protein of unknown function DUF1249 YPN_0524 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPN_0524 IPR013622 Calcineurin-like phosphoesterase C-terminal YPN_0524 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA YPN_0524 IPR029052 Metallo-dependent phosphatase-like YPN_0525 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPN_0525 IPR029058 Alpha/Beta hydrolase fold YPN_0526 IPR001241 DNA topoisomerase, type IIA YPN_0526 IPR002288 DNA gyrase B subunit, C-terminal YPN_0526 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_0526 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YPN_0526 IPR006171 Toprim domain YPN_0526 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPN_0526 IPR013759 DNA topoisomerase, type IIA, central domain YPN_0526 IPR013760 DNA topoisomerase, type IIA-like domain YPN_0526 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_0526 IPR018522 DNA topoisomerase, type IIA, conserved site YPN_0526 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0526 IPR036890 YPN_0526 YPN_0527 IPR000847 Transcription regulator HTH, LysR YPN_0527 IPR005119 LysR, substrate-binding YPN_0527 IPR036388 YPN_0527 YPN_0527 IPR036390 YPN_0527 YPN_0528 IPR003680 Flavodoxin-like fold YPN_0528 IPR029039 Flavoprotein-like YPN_0529 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPN_0529 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YPN_0529 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YPN_0529 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain YPN_0529 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPN_0529 IPR013760 DNA topoisomerase, type IIA-like domain YPN_0529 IPR035516 YPN_0529 YPN_0530 IPR002123 Phospholipid/glycerol acyltransferase YPN_0530 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YPN_0531 IPR008972 Cupredoxin YPN_0531 IPR011706 Multicopper oxidase, type 2 YPN_0531 IPR011707 Multicopper oxidase, type 3 YPN_0531 IPR026589 Cell division protein FtsP YPN_0532 IPR007197 Radical SAM YPN_0532 IPR013704 Uncharacterised protein family UPF0313, N-terminal YPN_0532 IPR020612 Methylthiotransferase, conserved site YPN_0532 IPR022946 Uncharacterised protein family UPF0313 YPN_0532 IPR023404 Radical SAM, alpha/beta horseshoe YPN_0533 IPR024560 Uncharacterised protein family UPF0313, C-terminal YPN_0534 IPR018170 Aldo/keto reductase, conserved site YPN_0534 IPR020471 Aldo/keto reductase subgroup YPN_0534 IPR023210 NADP-dependent oxidoreductase domain YPN_0534 IPR036812 YPN_0534 YPN_0535 IPR001670 Alcohol dehydrogenase, iron-type YPN_0535 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPN_0536 IPR009057 Homeodomain-like YPN_0536 IPR009594 Transcription regulator HTH, AraC, N-terminal YPN_0536 IPR018060 DNA binding HTH domain, AraC-type YPN_0537 IPR032816 YPN_0537 YPN_0538 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPN_0538 IPR006233 Cystathionine beta-lyase, bacterial YPN_0538 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_0538 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_0538 IPR015424 Pyridoxal phosphate-dependent transferase YPN_0539 IPR002898 MotA/TolQ/ExbB proton channel YPN_0539 IPR014164 TonB-system energizer ExbB type-1 YPN_0540 IPR003400 Biopolymer transport protein ExbD/TolR YPN_0540 IPR014170 TonB system transport protein ExbD type-1 YPN_0541 IPR036465 YPN_0541 YPN_0542 IPR031582 YPN_0542 YPN_0543 IPR012495 TadE-like YPN_0544 IPR011990 Tetratricopeptide-like helical domain YPN_0545 IPR018076 Type II secretion system F domain YPN_0546 IPR018076 Type II secretion system F domain YPN_0547 IPR001482 Type II secretion system protein E YPN_0547 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0548 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0550 IPR004846 Type II/III secretion system YPN_0551 IPR032789 YPN_0551 YPN_0553 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPN_0554 IPR002686 Transposase IS200-like YPN_0554 IPR036515 YPN_0554 YPN_0555 IPR000015 Outer membrane usher protein YPN_0555 IPR025885 PapC, N-terminal domain YPN_0555 IPR025949 PapC-like, C-terminal domain YPN_0555 IPR037224 YPN_0555 YPN_0556 IPR001829 Pili assembly chaperone, bacterial YPN_0556 IPR008962 PapD-like YPN_0556 IPR013783 Immunoglobulin-like fold YPN_0556 IPR016147 PapD, N-terminal, bacterial YPN_0556 IPR016148 Pili assembly chaperone, C-terminal domain YPN_0556 IPR018046 Pili assembly chaperone, conserved site YPN_0556 IPR036316 YPN_0556 YPN_0557 IPR000259 Fimbrial-type adhesion domain YPN_0557 IPR008966 Adhesion domain YPN_0557 IPR036937 YPN_0557 YPN_0558 IPR002491 ABC transporter periplasmic binding domain YPN_0560 IPR021326 Protein of unknown function DUF2931 YPN_0562 IPR001712 Type III secretion system FHIPEP YPN_0563 IPR001712 Type III secretion system FHIPEP YPN_0563 IPR025505 FHIPEP conserved site YPN_0564 IPR006135 Type III secretion system substrate exporter YPN_0564 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YPN_0564 IPR029025 Type III secretion system substrate exporter, C-terminal YPN_0565 IPR002010 Type III secretion system inner membrane R protein YPN_0566 IPR002191 Bacterial export protein family 3 YPN_0566 IPR006305 Flagellar biosynthesis protein FliQ YPN_0567 IPR005837 Flagellar transport protein FliP YPN_0567 IPR005838 Type III secretion system inner membrane P protein YPN_0568 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPN_0568 IPR001543 Surface presentation of antigen (SpoA) YPN_0568 IPR012826 Flagellar motor switch FliN YPN_0568 IPR036429 YPN_0568 YPN_0569 IPR001543 Surface presentation of antigen (SpoA) YPN_0569 IPR036429 YPN_0569 YPN_0570 IPR002078 RNA polymerase sigma factor 54 interaction domain YPN_0570 IPR002197 DNA binding HTH domain, Fis-type YPN_0570 IPR003593 AAA+ ATPase domain YPN_0570 IPR009057 Homeodomain-like YPN_0570 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPN_0570 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPN_0570 IPR025944 Sigma-54 interaction domain, conserved site YPN_0570 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0571 IPR001624 Flagellar hook-basal body complex protein FliE YPN_0572 IPR000067 Flagellar M-ring protein FliF YPN_0572 IPR006182 Secretory protein YscJ/FliF YPN_0572 IPR013556 Flagellar M-ring C-terminal YPN_0573 IPR000090 Flagellar motor switch protein FliG YPN_0573 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPN_0573 IPR023087 YPN_0573 YPN_0573 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPN_0573 IPR032779 YPN_0573 YPN_0574 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPN_0574 IPR019191 Essential protein Yae1, N-terminal YPN_0575 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPN_0575 IPR003593 AAA+ ATPase domain YPN_0575 IPR005714 ATPase, type III secretion system, FliI/YscN YPN_0575 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPN_0575 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0576 IPR012823 Flagellar export FliJ YPN_0577 IPR007809 FlgN-like domain YPN_0577 IPR036679 YPN_0577 YPN_0578 IPR007412 Anti-sigma-28 factor, FlgM YPN_0578 IPR031316 YPN_0578 YPN_0578 IPR035890 YPN_0578 YPN_0579 IPR013974 SAF domain YPN_0579 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPN_0580 IPR001444 Flagellar basal body rod protein, N-terminal YPN_0580 IPR006300 Flagellar basal-body rod protein FlgB YPN_0580 IPR019776 Flagellar basal body rod protein, conserved site YPN_0581 IPR001444 Flagellar basal body rod protein, N-terminal YPN_0581 IPR006299 Flagellar basal-body rod protein FlgC YPN_0581 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_0581 IPR019776 Flagellar basal body rod protein, conserved site YPN_0582 IPR005648 Flagellar hook capping protein YPN_0582 IPR025963 FlgD Tudor-like domain YPN_0582 IPR025965 FlgD Ig-like domain YPN_0583 IPR001444 Flagellar basal body rod protein, N-terminal YPN_0583 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_0583 IPR011491 Flagellar basal body FlaE YPN_0583 IPR019776 Flagellar basal body rod protein, conserved site YPN_0583 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPN_0583 IPR037058 YPN_0583 YPN_0583 IPR037925 YPN_0583 YPN_0584 IPR001444 Flagellar basal body rod protein, N-terminal YPN_0584 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_0584 IPR012836 Flagellar basal-body rod FlgF YPN_0584 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPN_0584 IPR037925 YPN_0584 YPN_0585 IPR001444 Flagellar basal body rod protein, N-terminal YPN_0585 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_0585 IPR012834 Flagellar basal-body rod FlgG YPN_0585 IPR019776 Flagellar basal body rod protein, conserved site YPN_0585 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPN_0585 IPR037925 YPN_0585 YPN_0586 IPR000527 Flagellar L-ring protein YPN_0587 IPR001782 Flagellar P-ring protein YPN_0588 IPR019301 Flagellar protein FlgJ, N-terminal YPN_0589 IPR001444 Flagellar basal body rod protein, N-terminal YPN_0589 IPR002371 Flagellar hook-associated protein, FlgK YPN_0589 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_0590 IPR001029 Flagellin, D0/D1 domain YPN_0590 IPR013384 Flagellar hook-associated protein 3 YPN_0593 IPR001867 Signal transduction response regulator, C-terminal YPN_0593 IPR016032 Signal transduction response regulator, C-terminal effector YPN_0593 IPR036388 YPN_0593 YPN_0594 IPR001029 Flagellin, D0/D1 domain YPN_0594 IPR001492 Flagellin YPN_0595 IPR009057 Homeodomain-like YPN_0595 IPR010921 Trp repressor/replication initiator YPN_0596 IPR001584 Integrase, catalytic core YPN_0596 IPR012337 Ribonuclease H-like domain YPN_0596 IPR025948 HTH-like domain YPN_0596 IPR036397 YPN_0596 YPN_0597 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPN_0597 IPR003029 Ribosomal protein S1, RNA-binding domain YPN_0597 IPR004087 K Homology domain YPN_0597 IPR004088 K Homology domain, type 1 YPN_0597 IPR012162 Polyribonucleotide nucleotidyltransferase YPN_0597 IPR012340 Nucleic acid-binding, OB-fold YPN_0597 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPN_0597 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YPN_0597 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0597 IPR022967 RNA-binding domain, S1 YPN_0597 IPR027408 PNPase/RNase PH domain YPN_0597 IPR036345 YPN_0597 YPN_0597 IPR036456 YPN_0597 YPN_0597 IPR036612 YPN_0597 YPN_0598 IPR011990 Tetratricopeptide-like helical domain YPN_0598 IPR013105 Tetratricopeptide TPR2 YPN_0598 IPR019734 Tetratricopeptide repeat YPN_0598 IPR023605 Lipoprotein NlpI YPN_0599 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPN_0599 IPR001650 Helicase, C-terminal YPN_0599 IPR005580 DbpA, RNA-binding YPN_0599 IPR011545 DEAD/DEAH box helicase domain YPN_0599 IPR012677 Nucleotide-binding, alpha-beta plait YPN_0599 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_0599 IPR021046 Cold-shock protein, DEAD box A, C-terminal YPN_0599 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0599 IPR028618 ATP-dependent RNA helicase DeaD YPN_0601 IPR009241 Addiction module killer protein YPN_0602 IPR001387 Cro/C1-type helix-turn-helix domain YPN_0602 IPR010982 Lambda repressor-like, DNA-binding domain YPN_0603 IPR011251 Luciferase-like domain YPN_0603 IPR019949 Luciferase family oxidoreductase, group 1 YPN_0603 IPR036661 YPN_0603 YPN_0604 IPR006143 RND efflux pump, membrane fusion protein YPN_0604 IPR032317 YPN_0604 YPN_0605 IPR001036 Acriflavin resistance protein YPN_0605 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPN_0605 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPN_0606 IPR003423 Outer membrane efflux protein YPN_0606 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YPN_0607 IPR001539 Peptidase U32 YPN_0608 IPR001539 Peptidase U32 YPN_0608 IPR036206 YPN_0608 YPN_0610 IPR003033 SCP2 sterol-binding domain YPN_0610 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YPN_0610 IPR036527 YPN_0610 YPN_0611 IPR000182 GNAT domain YPN_0611 IPR016181 Acyl-CoA N-acyltransferase YPN_0612 IPR000305 GIY-YIG nuclease superfamily YPN_0612 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPN_0612 IPR035901 YPN_0612 YPN_0613 IPR008397 Alginate lyase domain YPN_0613 IPR008929 Chondroitin AC/alginate lyase YPN_0613 IPR012480 Heparinase II/III-like YPN_0614 IPR008397 Alginate lyase domain YPN_0614 IPR008929 Chondroitin AC/alginate lyase YPN_0615 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_0616 IPR000515 MetI-like domain YPN_0616 IPR035906 YPN_0616 YPN_0617 IPR000515 MetI-like domain YPN_0617 IPR035906 YPN_0617 YPN_0618 IPR003439 ABC transporter-like YPN_0618 IPR003593 AAA+ ATPase domain YPN_0618 IPR008995 Molybdate/tungstate binding, C-terminal YPN_0618 IPR013611 Transport-associated OB, type 2 YPN_0618 IPR017871 ABC transporter, conserved site YPN_0618 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0619 IPR008397 Alginate lyase domain YPN_0619 IPR008929 Chondroitin AC/alginate lyase YPN_0620 IPR011194 Uncharacterised protein family UPF0306 YPN_0620 IPR012349 FMN-binding split barrel YPN_0621 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPN_0621 IPR036291 YPN_0621 YPN_0622 IPR001279 Beta-lactamase-like YPN_0622 IPR017693 Phosphonate metabolism protein PhnP YPN_0622 IPR036866 YPN_0622 YPN_0623 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPN_0623 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YPN_0623 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0624 IPR011059 Metal-dependent hydrolase, composite domain YPN_0624 IPR012696 Phosphonate metabolism PhnM YPN_0624 IPR013108 Amidohydrolase 3 YPN_0624 IPR032466 YPN_0624 YPN_0625 IPR003439 ABC transporter-like YPN_0625 IPR003593 AAA+ ATPase domain YPN_0625 IPR012701 Phosphonate C-P lyase system, PhnL YPN_0625 IPR017871 ABC transporter, conserved site YPN_0625 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0626 IPR003439 ABC transporter-like YPN_0626 IPR003593 AAA+ ATPase domain YPN_0626 IPR012700 Phosphonate C-P lyase system, PhnK YPN_0626 IPR017871 ABC transporter, conserved site YPN_0626 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0627 IPR010306 Phosphonate metabolism PhnJ YPN_0628 IPR008773 Phosphonate metabolism protein PhnI YPN_0629 IPR008772 Bacterial phosphonate metabolism, PhnH YPN_0629 IPR038058 YPN_0629 YPN_0630 IPR008772 Bacterial phosphonate metabolism, PhnH YPN_0630 IPR038058 YPN_0630 YPN_0631 IPR009609 Phosphonate metabolism PhnG YPN_0632 IPR000524 Transcription regulator HTH, GntR YPN_0632 IPR011663 UbiC transcription regulator-associated YPN_0632 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPN_0632 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPN_0632 IPR036388 YPN_0632 YPN_0632 IPR036390 YPN_0632 YPN_0633 IPR001989 Radical-activating enzyme, conserved site YPN_0633 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YPN_0633 IPR013785 Aldolase-type TIM barrel YPN_0634 IPR005144 ATP-cone YPN_0634 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YPN_0634 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPN_0635 IPR003439 ABC transporter-like YPN_0635 IPR003593 AAA+ ATPase domain YPN_0635 IPR017871 ABC transporter, conserved site YPN_0635 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0636 IPR003439 ABC transporter-like YPN_0636 IPR003593 AAA+ ATPase domain YPN_0636 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0637 IPR000515 MetI-like domain YPN_0637 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPN_0637 IPR035906 YPN_0637 YPN_0638 IPR000515 MetI-like domain YPN_0638 IPR035906 YPN_0638 YPN_0640 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_0641 IPR004375 Conserved hypothetical protein CHP00022 YPN_0641 IPR037012 YPN_0641 YPN_0642 IPR002292 Ornithine/putrescine carbamoyltransferase YPN_0642 IPR006130 Aspartate/ornithine carbamoyltransferase YPN_0642 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPN_0642 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPN_0642 IPR024904 Ornithine carbamoyltransferase YPN_0642 IPR036901 YPN_0642 YPN_0643 IPR009671 Regulator of ribonuclease activity B domain YPN_0643 IPR016716 Regulator of ribonuclease activity B YPN_0643 IPR036701 YPN_0643 YPN_0644 IPR000182 GNAT domain YPN_0644 IPR016181 Acyl-CoA N-acyltransferase YPN_0645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_0645 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPN_0645 IPR002303 Valine-tRNA ligase YPN_0645 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPN_0645 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPN_0645 IPR010978 tRNA-binding arm YPN_0645 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPN_0645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0645 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YPN_0645 IPR037118 YPN_0645 YPN_0646 IPR007459 DNA polymerase III chi subunit, HolC YPN_0646 IPR036768 YPN_0646 YPN_0647 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPN_0647 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YPN_0647 IPR011356 Leucine aminopeptidase/peptidase B YPN_0647 IPR023042 Peptidase M17, leucine aminopeptidase YPN_0648 IPR005495 Permease YjgP/YjgQ, predicted YPN_0648 IPR030922 YPN_0648 YPN_0649 IPR005495 Permease YjgP/YjgQ, predicted YPN_0649 IPR030923 YPN_0649 YPN_0650 IPR002686 Transposase IS200-like YPN_0650 IPR036515 YPN_0650 YPN_0651 IPR002104 Integrase, catalytic YPN_0651 IPR010998 Integrase, Lambda-type, N-terminal YPN_0651 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_0651 IPR013762 Integrase-like, catalytic core YPN_0651 IPR025166 Domain of unknown function DUF4102 YPN_0651 IPR038488 YPN_0651 YPN_0652 IPR004919 Domain of unknown function DUF262 YPN_0652 IPR011089 Domain of unknown function DUF1524 YPN_0653 IPR036890 YPN_0653 YPN_0654 IPR001270 ClpA/B family YPN_0654 IPR002611 IstB-like ATP-binding protein YPN_0654 IPR003593 AAA+ ATPase domain YPN_0654 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0654 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_0655 IPR001584 Integrase, catalytic core YPN_0655 IPR006120 Resolvase, HTH domain YPN_0655 IPR009057 Homeodomain-like YPN_0655 IPR012337 Ribonuclease H-like domain YPN_0656 IPR002686 Transposase IS200-like YPN_0656 IPR036515 YPN_0656 YPN_0657 IPR005584 DNA gyrase inhibitor YacG YPN_0657 IPR013088 Zinc finger, NHR/GATA-type YPN_0658 IPR009777 Cell division protein ZapD YPN_0658 IPR027462 Z ring-associated protein D, C-terminal domain YPN_0658 IPR036268 YPN_0658 YPN_0659 IPR001977 Dephospho-CoA kinase YPN_0659 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0660 IPR001093 IMP dehydrogenase/GMP reductase YPN_0660 IPR005993 Guanosine monophosphate reductase 1 YPN_0660 IPR013785 Aldolase-type TIM barrel YPN_0660 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPN_0661 IPR001992 Type II secretion system conserved site YPN_0661 IPR003004 GspF/PilC family YPN_0661 IPR018076 Type II secretion system F domain YPN_0662 IPR001482 Type II secretion system protein E YPN_0662 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0663 IPR012902 Prokaryotic N-terminal methylation site YPN_0664 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPN_0664 IPR004393 Nicotinate-nucleotide pyrophosphorylase YPN_0664 IPR013785 Aldolase-type TIM barrel YPN_0664 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YPN_0664 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPN_0664 IPR036068 YPN_0664 YPN_0664 IPR037128 YPN_0664 YPN_0665 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPN_0665 IPR036505 YPN_0665 YPN_0666 IPR031347 YPN_0666 YPN_0667 IPR002293 Amino acid/polyamine transporter I YPN_0667 IPR004840 Amino acid permease, conserved site YPN_0667 IPR004841 Amino acid permease/ SLC12A domain YPN_0668 IPR000524 Transcription regulator HTH, GntR YPN_0668 IPR008920 Transcription regulator FadR/GntR, C-terminal YPN_0668 IPR011711 GntR, C-terminal YPN_0668 IPR036388 YPN_0668 YPN_0668 IPR036390 YPN_0668 YPN_0669 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type YPN_0669 IPR005474 Transketolase, N-terminal YPN_0669 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPN_0669 IPR029061 Thiamin diphosphate-binding fold YPN_0670 IPR000089 Biotin/lipoyl attachment YPN_0670 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPN_0670 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPN_0670 IPR004167 E3 binding YPN_0670 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YPN_0670 IPR011053 Single hybrid motif YPN_0670 IPR023213 Chloramphenicol acetyltransferase-like domain YPN_0670 IPR036625 YPN_0670 YPN_0671 IPR001100 YPN_0671 YPN_0671 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPN_0671 IPR006258 Dihydrolipoamide dehydrogenase YPN_0671 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPN_0671 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPN_0671 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_0671 IPR036188 YPN_0671 YPN_0672 IPR002686 Transposase IS200-like YPN_0672 IPR036515 YPN_0672 YPN_0673 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPN_0673 IPR004406 Aconitase B, bacterial YPN_0673 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPN_0673 IPR015929 Aconitase B, N-terminal, bacterial YPN_0673 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPN_0673 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YPN_0673 IPR015933 Aconitase B, HEAT-like, bacterial YPN_0673 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPN_0673 IPR036008 YPN_0673 YPN_0673 IPR036288 YPN_0673 YPN_0674 IPR008249 Uncharacterised protein family UPF0231 YPN_0675 IPR000620 Drug/metabolite transporter YPN_0676 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YPN_0676 IPR009165 S-adenosylmethionine decarboxylase, bacterial YPN_0676 IPR016067 S-adenosylmethionine decarboxylase, core YPN_0677 IPR001045 Spermidine/spermine synthases family YPN_0677 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0677 IPR030373 YPN_0677 YPN_0677 IPR035246 YPN_0677 YPN_0677 IPR037163 YPN_0677 YPN_0678 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPN_0678 IPR038432 YPN_0678 YPN_0679 IPR001117 Multicopper oxidase, type 1 YPN_0679 IPR002355 Multicopper oxidase, copper-binding site YPN_0679 IPR008972 Cupredoxin YPN_0679 IPR011706 Multicopper oxidase, type 2 YPN_0679 IPR011707 Multicopper oxidase, type 3 YPN_0679 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPN_0680 IPR000836 Phosphoribosyltransferase domain YPN_0680 IPR005904 Hypoxanthine phosphoribosyl transferase YPN_0680 IPR029057 Phosphoribosyltransferase-like YPN_0681 IPR001765 Carbonic anhydrase YPN_0681 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPN_0681 IPR036874 YPN_0681 YPN_0682 IPR003439 ABC transporter-like YPN_0682 IPR003593 AAA+ ATPase domain YPN_0682 IPR017871 ABC transporter, conserved site YPN_0682 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0683 IPR000412 ABC-2 transporter YPN_0683 IPR013525 ABC-2 type transporter YPN_0685 IPR002509 Polysaccharide deacetylase YPN_0685 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_0686 IPR003190 Aspartate decarboxylase YPN_0686 IPR009010 Aspartate decarboxylase-like domain YPN_0687 IPR003721 Pantoate-beta-alanine ligase YPN_0687 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0688 IPR003700 Ketopantoate hydroxymethyltransferase YPN_0688 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_0689 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YPN_0689 IPR035907 YPN_0689 YPN_0690 IPR002646 Poly A polymerase, head domain YPN_0690 IPR010206 Poly(A) polymerase I YPN_0690 IPR025866 Polymerase A arginine-rich C-terminal domain YPN_0690 IPR032828 YPN_0690 YPN_0691 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPN_0691 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0691 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPN_0691 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YPN_0693 IPR000962 Zinc finger, DksA/TraR C4-type YPN_0693 IPR012784 RNA polymerase-binding transcription factor DksA YPN_0693 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPN_0693 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPN_0693 IPR037187 YPN_0693 YPN_0694 IPR005224 Sugar fermentation stimulation protein YPN_0695 IPR004175 2',5' RNA ligase YPN_0695 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YPN_0695 IPR014051 Phosphoesterase, HXTX YPN_0696 IPR001650 Helicase, C-terminal YPN_0696 IPR007502 Helicase-associated domain YPN_0696 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YPN_0696 IPR011545 DEAD/DEAH box helicase domain YPN_0696 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal YPN_0696 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_0696 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0697 IPR001264 Glycosyl transferase, family 51 YPN_0697 IPR001460 Penicillin-binding protein, transpeptidase YPN_0697 IPR011813 Penicillin-binding protein 1B YPN_0697 IPR012338 Beta-lactamase/transpeptidase-like YPN_0697 IPR023346 Lysozyme-like domain YPN_0697 IPR028166 Bifunctional transglycosylase second domain YPN_0697 IPR032730 YPN_0697 YPN_0697 IPR036950 YPN_0697 YPN_0698 IPR003439 ABC transporter-like YPN_0698 IPR003593 AAA+ ATPase domain YPN_0698 IPR017871 ABC transporter, conserved site YPN_0698 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0699 IPR002491 ABC transporter periplasmic binding domain YPN_0700 IPR000522 ABC transporter, permease protein YPN_0700 IPR037294 YPN_0700 YPN_0701 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YPN_0701 IPR005814 Aminotransferase class-III YPN_0701 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_0701 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_0701 IPR015424 Pyridoxal phosphate-dependent transferase YPN_0702 IPR001807 Chloride channel, voltage gated YPN_0702 IPR014743 Chloride channel, core YPN_0702 IPR023861 Chloride channel, ClcA YPN_0703 IPR000361 FeS cluster biogenesis YPN_0703 IPR016092 FeS cluster insertion protein YPN_0703 IPR017870 FeS cluster insertion, C-terminal, conserved site YPN_0703 IPR023063 Iron-sulfur cluster insertion protein ErpA YPN_0703 IPR035903 YPN_0703 YPN_0705 IPR005115 Uncharacterised domain UPF0126 YPN_0706 IPR002491 ABC transporter periplasmic binding domain YPN_0706 IPR023544 ABC transporter, vitamin B12-binding protein YPN_0707 IPR000845 Nucleoside phosphorylase domain YPN_0707 IPR010049 MTA/SAH nucleosidase YPN_0707 IPR035994 YPN_0707 YPN_0708 IPR003607 HD/PDEase domain YPN_0708 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase YPN_0708 IPR006674 HD domain YPN_0708 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria YPN_0708 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain YPN_0708 IPR026875 Phosphohydrolase-associated domain YPN_0709 IPR001478 PDZ domain YPN_0709 IPR001940 Peptidase S1C YPN_0709 IPR009003 Trypsin-like cysteine/serine peptidase domain YPN_0709 IPR011782 Peptidase S1C, Do YPN_0709 IPR036034 YPN_0709 YPN_0710 IPR001789 Signal transduction response regulator, receiver domain YPN_0710 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_0710 IPR003660 HAMP linker domain YPN_0710 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_0710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_0710 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPN_0710 IPR011006 CheY-like superfamily YPN_0710 IPR019247 Histidine kinase BarA, N-terminal YPN_0710 IPR036097 YPN_0710 YPN_0710 IPR036641 YPN_0710 YPN_0710 IPR036890 YPN_0710 YPN_0712 IPR030391 YPN_0712 YPN_0713 IPR002912 ACT domain YPN_0713 IPR003607 HD/PDEase domain YPN_0713 IPR004095 TGS YPN_0713 IPR004811 RelA/SpoT family YPN_0713 IPR007685 RelA/SpoT YPN_0713 IPR012675 Beta-grasp domain YPN_0713 IPR012676 TGS-like YPN_0714 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPN_0714 IPR011551 NTP pyrophosphohydrolase MazG, bacterial YPN_0715 IPR004468 CTP synthase YPN_0715 IPR017456 CTP synthase, N-terminal YPN_0715 IPR017926 Glutamine amidotransferase YPN_0715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0715 IPR029062 Class I glutamine amidotransferase-like YPN_0716 IPR000941 Enolase YPN_0716 IPR020809 Enolase, conserved site YPN_0716 IPR020810 Enolase, C-terminal YPN_0716 IPR020811 Enolase, N-terminal YPN_0716 IPR029017 Enolase N-terminal domain-like YPN_0716 IPR036849 YPN_0716 YPN_0717 IPR001424 Superoxide dismutase, copper/zinc binding domain YPN_0717 IPR018152 Superoxide dismutase, copper/zinc, binding site YPN_0717 IPR036423 YPN_0717 YPN_0718 IPR007197 Radical SAM YPN_0718 IPR013785 Aldolase-type TIM barrel YPN_0718 IPR024924 7-carboxy-7-deazaguanine synthase-like YPN_0718 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YPN_0719 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPN_0719 IPR038418 YPN_0719 YPN_0720 IPR001094 Flavodoxin YPN_0720 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_0720 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPN_0720 IPR003097 FAD-binding, type 1 YPN_0720 IPR008254 Flavodoxin/nitric oxide synthase YPN_0720 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YPN_0720 IPR017938 Riboflavin synthase-like beta-barrel YPN_0720 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 YPN_0720 IPR029039 Flavoprotein-like YPN_0720 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YPN_0720 IPR039261 YPN_0720 YPN_0721 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPN_0721 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YPN_0721 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPN_0721 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YPN_0721 IPR036136 YPN_0721 YPN_0722 IPR002500 Phosphoadenosine phosphosulphate reductase YPN_0722 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0723 IPR002500 Phosphoadenosine phosphosulphate reductase YPN_0723 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0724 IPR013321 Arc-type ribbon-helix-helix YPN_0724 IPR031807 YPN_0724 YPN_0724 IPR035069 YPN_0724 YPN_0725 IPR012933 HicA mRNA interferase family YPN_0725 IPR038570 YPN_0725 YPN_0726 IPR000878 Tetrapyrrole methylase YPN_0726 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPN_0726 IPR006366 Uroporphyrin-III C-methyltransferase YPN_0726 IPR006367 Sirohaem synthase, N-terminal YPN_0726 IPR012409 Sirohaem synthase YPN_0726 IPR014776 Tetrapyrrole methylase, subdomain 2 YPN_0726 IPR014777 Tetrapyrrole methylase, subdomain 1 YPN_0726 IPR019478 Sirohaem synthase, dimerisation domain YPN_0726 IPR028281 Siroheme synthase, central domain YPN_0726 IPR035996 YPN_0726 YPN_0726 IPR036291 YPN_0726 YPN_0726 IPR037115 YPN_0726 YPN_0727 IPR002500 Phosphoadenosine phosphosulphate reductase YPN_0727 IPR011784 Sulphate adenylyltransferase, small subunit YPN_0727 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0728 IPR000795 Elongation factor, GTP-binding domain YPN_0728 IPR005225 Small GTP-binding protein domain YPN_0728 IPR009000 Translation protein, beta-barrel domain YPN_0728 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPN_0728 IPR011779 Sulphate adenylyltransferase, large subunit YPN_0728 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0728 IPR031157 YPN_0728 YPN_0729 IPR002891 Adenylylsulphate kinase YPN_0729 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0730 IPR022721 Protein of unknown function DUF3561 YPN_0731 IPR007060 Septum formation initiator FtsL/DivIC YPN_0731 IPR023081 Cell division protein FtsB YPN_0732 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPN_0732 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YPN_0732 IPR029044 Nucleotide-diphospho-sugar transferases YPN_0732 IPR034683 YPN_0732 YPN_0733 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YPN_0733 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YPN_0733 IPR036571 YPN_0733 YPN_0734 IPR001656 Pseudouridine synthase, TruD YPN_0734 IPR020103 Pseudouridine synthase, catalytic domain YPN_0734 IPR020119 Pseudouridine synthase TruD, conserved site YPN_0735 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YPN_0735 IPR030048 YPN_0735 YPN_0735 IPR036523 YPN_0735 YPN_0736 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YPN_0736 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0737 IPR011055 Duplicated hybrid motif YPN_0737 IPR016047 Peptidase M23 YPN_0737 IPR018392 LysM domain YPN_0737 IPR036779 YPN_0737 YPN_0738 IPR000943 RNA polymerase sigma-70 YPN_0738 IPR007624 RNA polymerase sigma-70 region 3 YPN_0738 IPR007627 RNA polymerase sigma-70 region 2 YPN_0738 IPR007630 RNA polymerase sigma-70 region 4 YPN_0738 IPR009042 RNA polymerase sigma-70 region 1.2 YPN_0738 IPR012761 RNA polymerase sigma factor RpoS YPN_0738 IPR013324 RNA polymerase sigma factor, region 3/4 YPN_0738 IPR013325 RNA polymerase sigma factor, region 2 YPN_0738 IPR014284 RNA polymerase sigma-70 like domain YPN_0738 IPR036388 YPN_0738 YPN_0739 IPR000432 DNA mismatch repair protein MutS, C-terminal YPN_0739 IPR005748 DNA mismatch repair protein MutS, type 1 YPN_0739 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YPN_0739 IPR007696 DNA mismatch repair protein MutS, core YPN_0739 IPR007860 DNA mismatch repair protein MutS, connector domain YPN_0739 IPR007861 DNA mismatch repair protein MutS, clamp YPN_0739 IPR016151 DNA mismatch repair protein MutS, N-terminal YPN_0739 IPR017261 DNA mismatch repair protein Msh6 YPN_0739 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0739 IPR036187 YPN_0739 YPN_0739 IPR036678 YPN_0739 YPN_0741 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPN_0741 IPR004785 Ribose 5-phosphate isomerase B YPN_0741 IPR036569 YPN_0741 YPN_0742 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPN_0742 IPR011032 GroES (chaperonin 10)-like YPN_0742 IPR013149 Alcohol dehydrogenase, C-terminal YPN_0742 IPR013154 Alcohol dehydrogenase GroES-like YPN_0742 IPR020843 Polyketide synthase, enoylreductase YPN_0742 IPR036291 YPN_0742 YPN_0743 IPR002347 Glucose/ribitol dehydrogenase YPN_0743 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_0743 IPR036291 YPN_0743 YPN_0744 IPR004006 Dak kinase YPN_0745 IPR004007 DhaL domain YPN_0745 IPR012737 Dihydroxyacetone kinase, subunit L YPN_0745 IPR036117 YPN_0745 YPN_0746 IPR007324 Sugar-binding domain, putative YPN_0746 IPR037171 YPN_0746 YPN_0747 IPR000802 Arsenical pump membrane protein, ArsB YPN_0748 IPR001845 HTH ArsR-type DNA-binding domain YPN_0748 IPR036388 YPN_0748 YPN_0748 IPR036390 YPN_0748 YPN_0750 IPR001638 Extracellular solute-binding protein, family 3 YPN_0751 IPR004852 Di-haem cytochrome c peroxidase YPN_0751 IPR009056 Cytochrome c-like domain YPN_0751 IPR025992 Haem-binding domain YPN_0751 IPR036909 YPN_0751 YPN_0753 IPR000531 TonB-dependent receptor, beta-barrel YPN_0753 IPR012910 TonB-dependent receptor, plug YPN_0753 IPR036942 YPN_0753 YPN_0753 IPR037066 YPN_0753 YPN_0754 IPR012927 ShET2 enterotoxin, N-terminal YPN_0756 IPR000994 Peptidase M24, structural domain YPN_0756 IPR001714 Peptidase M24, methionine aminopeptidase YPN_0756 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPN_0756 IPR036005 YPN_0756 YPN_0757 IPR021831 Protein of unknown function DUF3423 YPN_0758 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YPN_0758 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YPN_0758 IPR011167 Iron-dependent fumarate hydratase YPN_0758 IPR020557 Fumarate lyase, conserved site YPN_0758 IPR036660 YPN_0758 YPN_0759 IPR000577 YPN_0759 YPN_0759 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_0759 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_0760 IPR004560 L-ribulose-5-phosphate 3-epimerase YPN_0760 IPR013022 Xylose isomerase-like, TIM barrel domain YPN_0760 IPR036237 YPN_0760 YPN_0761 IPR001851 ABC transporter, permease YPN_0762 IPR001851 ABC transporter, permease YPN_0763 IPR003439 ABC transporter-like YPN_0763 IPR003593 AAA+ ATPase domain YPN_0763 IPR017871 ABC transporter, conserved site YPN_0763 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0764 IPR002686 Transposase IS200-like YPN_0764 IPR036515 YPN_0764 YPN_0765 IPR025997 Periplasmic binding protein domain YPN_0765 IPR028082 Periplasmic binding protein-like I YPN_0766 IPR001034 HTH DeoR N-terminal domain YPN_0766 IPR014036 DeoR C-terminal sensor domain YPN_0766 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPN_0766 IPR036390 YPN_0766 YPN_0766 IPR037171 YPN_0766 YPN_0767 IPR001303 Class II aldolase/adducin N-terminal YPN_0767 IPR004661 L-ribulose-5-phosphate 4-epimerase YPN_0767 IPR036409 YPN_0767 YPN_0768 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPN_0768 IPR006656 Molybdopterin oxidoreductase YPN_0768 IPR006657 Molydopterin dinucleotide-binding domain YPN_0768 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPN_0768 IPR009010 Aspartate decarboxylase-like domain YPN_0768 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPN_0768 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPN_0769 IPR014297 Dimethylsulphoxide reductase, chain B YPN_0769 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_0769 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_0770 IPR007059 DMSO reductase anchor subunit (DmsC) YPN_0771 IPR020945 DMSO/Nitrate reductase chaperone YPN_0771 IPR026269 Tat proofreading chaperone DmsD-type YPN_0771 IPR028611 Tat proofreading chaperone DmsD YPN_0771 IPR036411 YPN_0771 YPN_0772 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPN_0772 IPR016174 Di-haem cytochrome, transmembrane YPN_0773 IPR009155 Cytochrome b562 YPN_0773 IPR010980 Cytochrome c/b562 YPN_0774 IPR000763 Catalase-peroxidase haem YPN_0774 IPR002016 Haem peroxidase, plant/fungal/bacterial YPN_0774 IPR010255 Haem peroxidase YPN_0774 IPR019793 Peroxidases heam-ligand binding site YPN_0774 IPR019794 Peroxidase, active site YPN_0775 IPR025997 Periplasmic binding protein domain YPN_0775 IPR028082 Periplasmic binding protein-like I YPN_0776 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPN_0776 IPR036215 YPN_0776 YPN_0777 IPR003439 ABC transporter-like YPN_0777 IPR003593 AAA+ ATPase domain YPN_0777 IPR017871 ABC transporter, conserved site YPN_0777 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0778 IPR001851 ABC transporter, permease YPN_0779 IPR005474 Transketolase, N-terminal YPN_0779 IPR029061 Thiamin diphosphate-binding fold YPN_0780 IPR005475 Transketolase-like, pyrimidine-binding domain YPN_0780 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPN_0780 IPR029061 Thiamin diphosphate-binding fold YPN_0780 IPR033248 YPN_0780 YPN_0781 IPR000577 YPN_0781 YPN_0781 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_0781 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_0782 IPR009015 L-fucose isomerase, N-terminal/central domain YPN_0782 IPR015888 L-fucose isomerase, C-terminal YPN_0784 IPR000835 MarR-type HTH domain YPN_0784 IPR007324 Sugar-binding domain, putative YPN_0784 IPR036390 YPN_0784 YPN_0784 IPR037171 YPN_0784 YPN_0785 IPR011701 Major facilitator superfamily YPN_0785 IPR036259 YPN_0785 YPN_0786 IPR008136 CinA, C-terminal YPN_0786 IPR036653 YPN_0786 YPN_0787 IPR003593 AAA+ ATPase domain YPN_0787 IPR013765 DNA recombination and repair protein RecA YPN_0787 IPR020584 DNA recombination/repair protein RecA, conserved site YPN_0787 IPR023400 DNA recombination and repair protein RecA, C-terminal YPN_0787 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0788 IPR003783 Regulatory protein RecX YPN_0788 IPR036388 YPN_0788 YPN_0789 IPR002318 Alanine-tRNA ligase, class IIc YPN_0789 IPR003156 DHHA1 domain YPN_0789 IPR009000 Translation protein, beta-barrel domain YPN_0789 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPN_0789 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain YPN_0789 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YPN_0789 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YPN_0789 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YPN_0790 IPR003751 Carbon storage regulator YPN_0790 IPR036107 YPN_0790 YPN_0791 IPR006439 HAD hydrolase, subfamily IA YPN_0791 IPR010976 Beta-phosphoglucomutase hydrolase YPN_0791 IPR023198 Phosphoglycolate phosphatase, domain 2 YPN_0791 IPR023214 HAD-like domain YPN_0791 IPR036412 YPN_0791 YPN_0792 IPR020143 Uncharacterised protein family, RP436 YPN_0793 IPR006334 Glutamate--cysteine ligase, monofunctional YPN_0793 IPR007370 Glutamate--cysteine ligase YPN_0793 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPN_0794 IPR003815 S-ribosylhomocysteinase (LuxS) YPN_0794 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPN_0794 IPR037005 YPN_0794 YPN_0795 IPR036515 YPN_0795 YPN_0796 IPR001584 Integrase, catalytic core YPN_0796 IPR006120 Resolvase, HTH domain YPN_0796 IPR009057 Homeodomain-like YPN_0796 IPR012337 Ribonuclease H-like domain YPN_0797 IPR001270 ClpA/B family YPN_0797 IPR002611 IstB-like ATP-binding protein YPN_0797 IPR003593 AAA+ ATPase domain YPN_0797 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0797 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_0798 IPR002686 Transposase IS200-like YPN_0798 IPR036515 YPN_0798 YPN_0799 IPR000644 CBS domain YPN_0799 IPR002550 Domain of unknown function DUF21 YPN_0799 IPR005170 Transporter-associated domain YPN_0799 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_0799 IPR036318 YPN_0799 YPN_0800 IPR002541 Cytochrome c assembly protein YPN_0801 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPN_0801 IPR003593 AAA+ ATPase domain YPN_0801 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YPN_0801 IPR004780 Signal recognition particle protein Ffh YPN_0801 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YPN_0801 IPR022941 Signal recognition particle, SRP54 subunit YPN_0801 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0801 IPR036891 YPN_0801 YPN_0803 IPR000307 Ribosomal protein S16 YPN_0803 IPR020592 Ribosomal protein S16, conserved site YPN_0803 IPR023803 Ribosomal protein S16 domain YPN_0804 IPR002676 RimM protein YPN_0804 IPR009000 Translation protein, beta-barrel domain YPN_0804 IPR011033 PRC-barrel-like YPN_0804 IPR011961 16S rRNA processing protein RimM YPN_0804 IPR027275 PRC-barrel domain YPN_0804 IPR036976 YPN_0804 YPN_0805 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YPN_0805 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YPN_0805 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YPN_0805 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_0805 IPR029028 Alpha/beta knot methyltransferases YPN_0806 IPR001857 Ribosomal protein L19 YPN_0806 IPR008991 Translation protein SH3-like domain YPN_0806 IPR018257 Ribosomal protein L19, conserved site YPN_0806 IPR038657 YPN_0806 YPN_0807 IPR002686 Transposase IS200-like YPN_0807 IPR036515 YPN_0807 YPN_0808 IPR007433 Protein of unknown function DUF481 YPN_0809 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPN_0810 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPN_0811 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPN_0812 IPR001789 Signal transduction response regulator, receiver domain YPN_0812 IPR007492 LytTR DNA-binding domain YPN_0812 IPR011006 CheY-like superfamily YPN_0813 IPR006218 DAHP synthetase I/KDSA YPN_0813 IPR006219 DHAP synthase, class 1 YPN_0813 IPR013785 Aldolase-type TIM barrel YPN_0814 IPR002701 Chorismate mutase YPN_0814 IPR003099 Prephenate dehydrogenase YPN_0814 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YPN_0814 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_0814 IPR011277 Chorismate mutase, T-protein YPN_0814 IPR036263 YPN_0814 YPN_0814 IPR036291 YPN_0814 YPN_0814 IPR036979 YPN_0814 YPN_0815 IPR001086 Prephenate dehydratase YPN_0815 IPR002701 Chorismate mutase YPN_0815 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase YPN_0815 IPR010952 Chorismate mutase, gammaproteobacteria YPN_0815 IPR018528 Prephenate dehydratase, conserved site YPN_0815 IPR036263 YPN_0815 YPN_0815 IPR036979 YPN_0815 YPN_0816 IPR002686 Transposase IS200-like YPN_0816 IPR036515 YPN_0816 YPN_0817 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein YPN_0817 IPR036567 YPN_0817 YPN_0818 IPR011990 Tetratricopeptide-like helical domain YPN_0818 IPR017689 Outer membrane protein assembly factor BamD YPN_0818 IPR039565 YPN_0818 YPN_0819 IPR002942 RNA-binding S4 domain YPN_0819 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPN_0819 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPN_0819 IPR006225 Pseudouridine synthase, RluC/RluD YPN_0819 IPR020103 Pseudouridine synthase, catalytic domain YPN_0819 IPR036986 YPN_0819 YPN_0820 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPN_0820 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPN_0820 IPR038371 YPN_0820 YPN_0821 IPR001270 ClpA/B family YPN_0821 IPR003593 AAA+ ATPase domain YPN_0821 IPR003959 ATPase, AAA-type, core YPN_0821 IPR004176 Clp, N-terminal YPN_0821 IPR017730 Chaperonin ClpB YPN_0821 IPR018368 ClpA/B, conserved site 1 YPN_0821 IPR019489 Clp ATPase, C-terminal YPN_0821 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0821 IPR028299 ClpA/B, conserved site 2 YPN_0821 IPR036628 YPN_0821 YPN_0822 IPR017028 Uncharacterised conserved protein UCP034456 YPN_0822 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPN_0823 IPR001736 Phospholipase D/Transphosphatidylase YPN_0823 IPR025202 Phospholipase D-like domain YPN_0824 IPR000182 GNAT domain YPN_0824 IPR003781 CoA-binding YPN_0824 IPR013815 ATP-grasp fold, subdomain 1 YPN_0824 IPR016102 Succinyl-CoA synthetase-like YPN_0824 IPR016181 Acyl-CoA N-acyltransferase YPN_0824 IPR032875 YPN_0824 YPN_0824 IPR036291 YPN_0824 YPN_0825 IPR005636 DTW YPN_0826 IPR005746 Thioredoxin YPN_0826 IPR013766 Thioredoxin domain YPN_0826 IPR017937 Thioredoxin, conserved site YPN_0826 IPR036249 YPN_0826 YPN_0827 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPN_0827 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPN_0827 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YPN_0827 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_0827 IPR029028 Alpha/beta knot methyltransferases YPN_0827 IPR029064 50S ribosomal protein L30e-like YPN_0828 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPN_0828 IPR011701 Major facilitator superfamily YPN_0828 IPR036259 YPN_0828 YPN_0829 IPR005694 Efflux pump membrane protein Emr YPN_0829 IPR006143 RND efflux pump, membrane fusion protein YPN_0829 IPR032317 YPN_0829 YPN_0830 IPR000835 MarR-type HTH domain YPN_0830 IPR023187 Transcriptional regulator MarR-type, conserved site YPN_0830 IPR036388 YPN_0830 YPN_0830 IPR036390 YPN_0830 YPN_0831 IPR008407 Branched-chain amino acid transport, AzlD YPN_0832 IPR011606 Branched-chain amino acid transport, permease YPN_0833 IPR011701 Major facilitator superfamily YPN_0833 IPR036259 YPN_0833 YPN_0834 IPR024507 Protein of unknown function DUF3225 YPN_0834 IPR032710 YPN_0834 YPN_0835 IPR014087 Amidohydrolase, AtzE type YPN_0835 IPR023631 Amidase signature domain YPN_0835 IPR036928 YPN_0835 YPN_0836 IPR025148 Protein of unknown function DUF4089 YPN_0838 IPR000281 Helix-turn-helix protein RpiR YPN_0838 IPR001347 Sugar isomerase (SIS) YPN_0838 IPR009057 Homeodomain-like YPN_0838 IPR036388 YPN_0838 YPN_0839 IPR001638 Extracellular solute-binding protein, family 3 YPN_0839 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPN_0840 IPR000515 MetI-like domain YPN_0840 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_0840 IPR035906 YPN_0840 YPN_0841 IPR000515 MetI-like domain YPN_0841 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_0841 IPR035906 YPN_0841 YPN_0842 IPR003439 ABC transporter-like YPN_0842 IPR003593 AAA+ ATPase domain YPN_0842 IPR017871 ABC transporter, conserved site YPN_0842 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0842 IPR030679 YPN_0842 YPN_0843 IPR000192 Aminotransferase class V domain YPN_0843 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_0843 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_0843 IPR015424 Pyridoxal phosphate-dependent transferase YPN_0844 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPN_0844 IPR002933 Peptidase M20 YPN_0844 IPR010158 Amidase, hydantoinase/carbamoylase YPN_0844 IPR036264 YPN_0844 YPN_0845 IPR005565 Haemolysin activator HlyB YPN_0845 IPR013686 Polypeptide-transport-associated, ShlB-type YPN_0846 IPR008638 Filamentous haemagglutinin, N-terminal YPN_0846 IPR011050 Pectin lyase fold/virulence factor YPN_0846 IPR012334 Pectin lyase fold YPN_0846 IPR024973 ESPR domain YPN_0847 IPR006626 Parallel beta-helix repeat YPN_0847 IPR012334 Pectin lyase fold YPN_0849 IPR004356 Adhesin operon regulatory protein YPN_0850 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPN_0850 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPN_0850 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPN_0850 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YPN_0850 IPR036250 YPN_0850 YPN_0850 IPR037069 YPN_0850 YPN_0851 IPR001347 Sugar isomerase (SIS) YPN_0851 IPR004515 Phosphoheptose isomerase YPN_0852 IPR026869 Putative glutamine amidotransferase type 2 YPN_0852 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_0853 IPR005490 L,D-transpeptidase catalytic domain YPN_0853 IPR038063 YPN_0853 YPN_0855 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A YPN_0855 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal YPN_0856 IPR004338 NADH-quinone reductase NQR2/RnfD YPN_0856 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit YPN_0857 IPR007329 FMN-binding YPN_0857 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit YPN_0858 IPR003667 Electron transport complex, Rnf/Nqr YPN_0858 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit YPN_0859 IPR003667 Electron transport complex, Rnf/Nqr YPN_0859 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YPN_0860 IPR001041 2Fe-2S ferredoxin-type domain YPN_0860 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_0860 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPN_0860 IPR008333 Oxidoreductase, FAD-binding domain YPN_0860 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit YPN_0860 IPR012675 Beta-grasp domain YPN_0860 IPR017938 Riboflavin synthase-like beta-barrel YPN_0860 IPR036010 YPN_0860 YPN_0860 IPR039261 YPN_0860 YPN_0861 IPR003374 ApbE-like domain YPN_0861 IPR024932 Flavin transferase ApbE YPN_0862 IPR007495 Protein of unknown function DUF539 YPN_0863 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPN_0863 IPR030395 YPN_0863 YPN_0864 IPR001126 DNA-repair protein, UmuC-like YPN_0864 IPR017961 DNA polymerase, Y-family, little finger domain YPN_0864 IPR022880 DNA polymerase IV YPN_0864 IPR024728 DNA polymerase type-Y, HhH motif YPN_0864 IPR036775 YPN_0864 YPN_0865 IPR001160 Peptidase M20C, Xaa-His dipeptidase YPN_0865 IPR002933 Peptidase M20 YPN_0865 IPR011650 Peptidase M20, dimerisation domain YPN_0866 IPR000847 Transcription regulator HTH, LysR YPN_0866 IPR036388 YPN_0866 YPN_0866 IPR036390 YPN_0866 YPN_0867 IPR004302 Chitin-binding, domain 3 YPN_0867 IPR013783 Immunoglobulin-like fold YPN_0867 IPR014756 Immunoglobulin E-set YPN_0867 IPR022409 PKD/Chitinase domain YPN_0867 IPR035986 YPN_0867 YPN_0868 IPR000836 Phosphoribosyltransferase domain YPN_0868 IPR023747 Xanthine-guanine phosphoribosyltransferase YPN_0868 IPR029057 Phosphoribosyltransferase-like YPN_0869 IPR010520 Protein of unknown function DUF1100, hydrolase-like YPN_0869 IPR029058 Alpha/Beta hydrolase fold YPN_0870 IPR009986 Sigma factor-binding protein Crl YPN_0870 IPR038208 YPN_0870 YPN_0871 IPR001048 Aspartate/glutamate/uridylate kinase YPN_0871 IPR001057 Glutamate/acetylglutamate kinase YPN_0871 IPR002478 PUA domain YPN_0871 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YPN_0871 IPR011529 Glutamate 5-kinase YPN_0871 IPR015947 PUA-like domain YPN_0871 IPR019797 Glutamate 5-kinase, conserved site YPN_0871 IPR036393 YPN_0871 YPN_0871 IPR036974 YPN_0871 YPN_0872 IPR000965 Gamma-glutamyl phosphate reductase GPR YPN_0872 IPR012134 Glutamate-5-semialdehyde dehydrogenase YPN_0872 IPR015590 Aldehyde dehydrogenase domain YPN_0872 IPR016161 Aldehyde/histidinol dehydrogenase YPN_0872 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_0872 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_0872 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YPN_0873 IPR009875 PilZ domain YPN_0873 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPN_0873 IPR012349 FMN-binding split barrel YPN_0873 IPR023787 Type III secretion system flagellar brake protein YcgR YPN_0876 IPR013216 Methyltransferase type 11 YPN_0876 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0877 IPR001737 Ribosomal RNA adenine methylase transferase YPN_0877 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_0878 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPN_0878 IPR023000 Shikimate kinase, conserved site YPN_0878 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0878 IPR027544 Shikimate kinase 2 YPN_0878 IPR031322 YPN_0878 YPN_0879 IPR009664 Protein of unknown function DUF1255 YPN_0879 IPR011051 RmlC-like cupin domain YPN_0879 IPR014710 RmlC-like jelly roll fold YPN_0880 IPR007476 Putative exonuclease, RdgC YPN_0881 IPR000600 ROK YPN_0882 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0882 IPR038729 YPN_0882 YPN_0883 IPR004593 Nuclease SbcCD subunit D YPN_0883 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPN_0883 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPN_0883 IPR029052 Metallo-dependent phosphatase-like YPN_0884 IPR001789 Signal transduction response regulator, receiver domain YPN_0884 IPR001867 Signal transduction response regulator, C-terminal YPN_0884 IPR011006 CheY-like superfamily YPN_0884 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YPN_0884 IPR016032 Signal transduction response regulator, C-terminal effector YPN_0884 IPR036388 YPN_0884 YPN_0885 IPR000014 PAS domain YPN_0885 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_0885 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_0885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_0885 IPR013767 PAS fold YPN_0885 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YPN_0885 IPR021766 Protein of unknown function DUF3329 YPN_0885 IPR035965 YPN_0885 YPN_0885 IPR036097 YPN_0885 YPN_0885 IPR036890 YPN_0885 YPN_0886 IPR011862 Phosphate binding protein YPN_0886 IPR024370 PBP domain YPN_0887 IPR004685 Branched-chain amino acid transport system II carrier protein YPN_0888 IPR002293 Amino acid/polyamine transporter I YPN_0888 IPR004840 Amino acid permease, conserved site YPN_0888 IPR004841 Amino acid permease/ SLC12A domain YPN_0889 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YPN_0889 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPN_0889 IPR013780 Glycosyl hydrolase, family 13, all-beta YPN_0889 IPR014756 Immunoglobulin E-set YPN_0889 IPR017069 Maltodextrin glucosidase YPN_0889 IPR017853 Glycoside hydrolase, superfamily YPN_0890 IPR002347 Glucose/ribitol dehydrogenase YPN_0890 IPR036291 YPN_0890 YPN_0891 IPR000101 Gamma-glutamyltranspeptidase YPN_0891 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_0892 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_0893 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPN_0893 IPR019479 Peroxiredoxin, C-terminal YPN_0893 IPR024706 Peroxiredoxin, AhpC-type YPN_0893 IPR036249 YPN_0893 YPN_0894 IPR007431 Acyl carrier protein phosphodiesterase YPN_0894 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YPN_0895 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YPN_0895 IPR036100 YPN_0895 YPN_0896 IPR002616 tRNA-guanine(15) transglycosylase-like YPN_0896 IPR004803 Queuine tRNA-ribosyltransferase YPN_0896 IPR036511 YPN_0896 YPN_0897 IPR003849 Preprotein translocase YajC YPN_0898 IPR005791 Protein translocase subunit SecD YPN_0898 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPN_0898 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPN_0898 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPN_0898 IPR027398 SecD export protein N-terminal TM domain YPN_0899 IPR005665 Protein-export membrane protein SecF, bacterial YPN_0899 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPN_0899 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPN_0899 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPN_0900 IPR002686 Transposase IS200-like YPN_0900 IPR036515 YPN_0900 YPN_0901 IPR002686 Transposase IS200-like YPN_0901 IPR036515 YPN_0901 YPN_0904 IPR003796 Ribonucleotide reductase regulator NrdR-like YPN_0904 IPR005144 ATP-cone YPN_0905 IPR002125 CMP/dCMP deaminase, zinc-binding YPN_0905 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YPN_0905 IPR004794 Riboflavin biosynthesis protein RibD YPN_0905 IPR011549 Riboflavin-specific deaminase, C-terminal YPN_0905 IPR016192 APOBEC/CMP deaminase, zinc-binding YPN_0905 IPR016193 Cytidine deaminase-like YPN_0905 IPR024072 Dihydrofolate reductase-like domain YPN_0906 IPR002180 6,7-dimethyl-8-ribityllumazine synthase YPN_0906 IPR034964 YPN_0906 YPN_0906 IPR036467 YPN_0906 YPN_0907 IPR006027 NusB/RsmB/TIM44 YPN_0907 IPR011605 NusB antitermination factor YPN_0907 IPR035926 YPN_0907 YPN_0908 IPR006283 Thiamine-monophosphate kinase YPN_0908 IPR010918 AIR synthase-related protein, C-terminal domain YPN_0908 IPR016188 PurM, N-terminal-like YPN_0908 IPR036676 YPN_0908 YPN_0908 IPR036921 YPN_0908 YPN_0909 IPR007686 YutG/PgpA domain YPN_0909 IPR026037 Phosphatidylglycerophosphatase A YPN_0909 IPR036681 YPN_0909 YPN_0910 IPR002686 Transposase IS200-like YPN_0910 IPR036515 YPN_0910 YPN_0911 IPR005474 Transketolase, N-terminal YPN_0911 IPR005475 Transketolase-like, pyrimidine-binding domain YPN_0911 IPR005477 Deoxyxylulose-5-phosphate synthase YPN_0911 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPN_0911 IPR020826 Transketolase binding site YPN_0911 IPR029061 Thiamin diphosphate-binding fold YPN_0911 IPR033248 YPN_0911 YPN_0912 IPR000092 Polyprenyl synthetase YPN_0912 IPR008949 Terpenoid synthase YPN_0912 IPR033749 YPN_0912 YPN_0913 IPR003761 Exonuclease VII, small subunit YPN_0913 IPR037004 YPN_0913 YPN_0915 IPR003720 tRNA sulfurtransferase ThiI YPN_0915 IPR004114 THUMP YPN_0915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0915 IPR020536 Thil, AANH domain YPN_0915 IPR026340 Thiazole biosynthesis domain YPN_0915 IPR036873 YPN_0915 YPN_0916 IPR002818 ThiJ/PfpI YPN_0916 IPR006287 DJ-1 YPN_0916 IPR029062 Class I glutamine amidotransferase-like YPN_0917 IPR003710 Ketopantoate reductase ApbA/PanE YPN_0917 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_0917 IPR013328 Dehydrogenase, multihelical YPN_0917 IPR013332 Ketopantoate reductase, N-terminal domain YPN_0917 IPR013752 Ketopantoate reductase, C-terminal domain YPN_0917 IPR036291 YPN_0917 YPN_0918 IPR007551 Protein of unknown function DUF520 YPN_0918 IPR035570 YPN_0918 YPN_0918 IPR036183 YPN_0918 YPN_0919 IPR001270 ClpA/B family YPN_0919 IPR002611 IstB-like ATP-binding protein YPN_0919 IPR003593 AAA+ ATPase domain YPN_0919 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0919 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_0920 IPR001584 Integrase, catalytic core YPN_0920 IPR006120 Resolvase, HTH domain YPN_0920 IPR009057 Homeodomain-like YPN_0920 IPR012337 Ribonuclease H-like domain YPN_0921 IPR007551 Protein of unknown function DUF520 YPN_0921 IPR035570 YPN_0921 YPN_0921 IPR035571 YPN_0921 YPN_0921 IPR036183 YPN_0921 YPN_0922 IPR011701 Major facilitator superfamily YPN_0922 IPR036259 YPN_0922 YPN_0923 IPR000537 UbiA prenyltransferase family YPN_0923 IPR006369 Protohaem IX farnesyltransferase YPN_0923 IPR030470 YPN_0923 YPN_0924 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YPN_0924 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YPN_0925 IPR000298 Cytochrome c oxidase subunit III domain YPN_0925 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YPN_0925 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YPN_0925 IPR035973 YPN_0925 YPN_0926 IPR000883 Cytochrome c oxidase subunit I YPN_0926 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YPN_0926 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YPN_0926 IPR036927 YPN_0926 YPN_0927 IPR006333 Cytochrome o ubiquinol oxidase subunit II YPN_0927 IPR008972 Cupredoxin YPN_0927 IPR010514 COX aromatic rich motif YPN_0927 IPR036257 YPN_0927 YPN_0928 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YPN_0928 IPR036777 YPN_0928 YPN_0929 IPR011701 Major facilitator superfamily YPN_0929 IPR036259 YPN_0929 YPN_0930 IPR005619 Uncharacterised protein family, YajG YPN_0930 IPR012640 Membrane lipoprotein, lipid attachment site YPN_0931 IPR002634 BolA protein YPN_0931 IPR036065 YPN_0931 YPN_0932 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPN_0932 IPR005215 Trigger factor YPN_0932 IPR008880 Trigger factor, C-terminal domain YPN_0932 IPR008881 Trigger factor, ribosome-binding, bacterial YPN_0932 IPR027304 Trigger factor/SurA domain YPN_0932 IPR036611 YPN_0932 YPN_0932 IPR037041 YPN_0932 YPN_0933 IPR001907 ATP-dependent Clp protease proteolytic subunit YPN_0933 IPR018215 ClpP, active site YPN_0933 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPN_0933 IPR029045 ClpP/crotonase-like domain YPN_0933 IPR033135 YPN_0933 YPN_0934 IPR003593 AAA+ ATPase domain YPN_0934 IPR003959 ATPase, AAA-type, core YPN_0934 IPR004487 Clp protease, ATP-binding subunit ClpX YPN_0934 IPR010603 Zinc finger, ClpX C4-type YPN_0934 IPR019489 Clp ATPase, C-terminal YPN_0934 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0934 IPR038366 YPN_0934 YPN_0935 IPR003111 Peptidase S16, lon N-terminal YPN_0935 IPR003593 AAA+ ATPase domain YPN_0935 IPR003959 ATPase, AAA-type, core YPN_0935 IPR004815 Lon protease, bacterial/eukaryotic-type YPN_0935 IPR008268 Peptidase S16, active site YPN_0935 IPR008269 Peptidase S16, Lon C-terminal YPN_0935 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_0935 IPR015947 PUA-like domain YPN_0935 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0935 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0935 IPR027543 Lon protease, bacterial YPN_0936 IPR000119 Histone-like bacterial DNA-binding protein YPN_0936 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPN_0936 IPR020816 Histone-like DNA-binding protein, conserved site YPN_0937 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPN_0937 IPR027304 Trigger factor/SurA domain YPN_0938 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPN_0938 IPR010994 RuvA domain 2-like YPN_0939 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPN_0939 IPR029069 HotDog domain YPN_0940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_0940 IPR018317 Queuosine biosynthesis protein QueC YPN_0941 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_0941 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPN_0942 IPR000150 Cof protein YPN_0942 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPN_0942 IPR023214 HAD-like domain YPN_0942 IPR023938 HMP-PP phosphatase YPN_0942 IPR036412 YPN_0942 YPN_0943 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_0943 IPR036052 YPN_0943 YPN_0944 IPR000485 AsnC-type HTH domain YPN_0944 IPR011008 Dimeric alpha-beta barrel YPN_0944 IPR019887 Transcription regulator AsnC-type, C-terminal YPN_0944 IPR019888 Transcription regulator AsnC-type YPN_0944 IPR036388 YPN_0944 YPN_0944 IPR036390 YPN_0944 YPN_0945 IPR003439 ABC transporter-like YPN_0945 IPR003593 AAA+ ATPase domain YPN_0945 IPR011527 ABC transporter type 1, transmembrane domain YPN_0945 IPR017871 ABC transporter, conserved site YPN_0945 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0945 IPR036640 YPN_0945 YPN_0946 IPR003439 ABC transporter-like YPN_0946 IPR003593 AAA+ ATPase domain YPN_0946 IPR011527 ABC transporter type 1, transmembrane domain YPN_0946 IPR017871 ABC transporter, conserved site YPN_0946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0946 IPR036640 YPN_0946 YPN_0947 IPR002187 Nitrogen regulatory protein PII YPN_0947 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPN_0947 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPN_0947 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPN_0947 IPR017918 Nitrogen regulatory protein PII, conserved site YPN_0948 IPR001905 Ammonium transporter YPN_0948 IPR018047 Ammonium transporter, conserved site YPN_0948 IPR024041 Ammonium transporter AmtB-like domain YPN_0948 IPR029020 Ammonium/urea transporter YPN_0949 IPR003703 Acyl-CoA thioesterase YPN_0949 IPR029069 HotDog domain YPN_0950 IPR039366 YPN_0950 YPN_0951 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPN_0951 IPR036217 YPN_0951 YPN_0951 IPR036388 YPN_0951 YPN_0952 IPR007985 Haemolysin expression modulating, HHA YPN_0952 IPR036666 YPN_0952 YPN_0953 IPR019693 Biofilm formation regulator YbaJ YPN_0955 IPR000473 Ribosomal protein L36 YPN_0955 IPR035977 YPN_0955 YPN_0956 IPR002150 Ribosomal protein L31 YPN_0956 IPR027493 Ribosomal protein L31 type B YPN_0956 IPR034704 YPN_0956 YPN_0957 IPR001036 Acriflavin resistance protein YPN_0957 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPN_0957 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPN_0958 IPR006143 RND efflux pump, membrane fusion protein YPN_0958 IPR032317 YPN_0958 YPN_0959 IPR001647 DNA-binding HTH domain, TetR-type YPN_0959 IPR009057 Homeodomain-like YPN_0959 IPR013572 Transcription regulator MAATS, C-terminal YPN_0959 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPN_0959 IPR036271 YPN_0959 YPN_0960 IPR003787 Sulphur relay, DsrE/F-like protein YPN_0960 IPR027396 DsrEFH-like YPN_0961 IPR006685 Mechanosensitive ion channel MscS YPN_0961 IPR006686 Mechanosensitive ion channel MscS, conserved site YPN_0961 IPR010920 Like-Sm (LSM) domain YPN_0961 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPN_0961 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPN_0961 IPR023408 YPN_0961 YPN_0961 IPR024393 Mechanosensitive ion channel MscS, porin domain YPN_0961 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPN_0962 IPR019630 Protein of unknown function DUF2496, YbaM-related YPN_0963 IPR010890 Primosomal replication PriB/PriC YPN_0963 IPR038338 YPN_0963 YPN_0964 IPR007401 Protein of unknown function DUF454 YPN_0965 IPR000836 Phosphoribosyltransferase domain YPN_0965 IPR005764 Adenine phosphoribosyl transferase YPN_0965 IPR029057 Phosphoribosyltransferase-like YPN_0966 IPR001270 ClpA/B family YPN_0966 IPR003593 AAA+ ATPase domain YPN_0966 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPN_0966 IPR012763 DNA polymerase III, subunit gamma/ tau YPN_0966 IPR021029 DNA polymerase III, tau subunit, domain V YPN_0966 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YPN_0966 IPR022754 DNA polymerase III, gamma subunit, domain III YPN_0966 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0966 IPR038249 YPN_0966 YPN_0967 IPR004401 Nucleoid-associated protein YbaB YPN_0967 IPR036894 YPN_0967 YPN_0968 IPR000093 DNA recombination protein RecR YPN_0968 IPR006171 Toprim domain YPN_0968 IPR015967 Recombination protein RecR, conserved site YPN_0968 IPR023627 Recombination protein RecR YPN_0968 IPR023628 Recombination protein RecR, C4-type zinc finger YPN_0970 IPR001404 Heat shock protein Hsp90 family YPN_0970 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_0970 IPR019805 Heat shock protein Hsp90, conserved site YPN_0970 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_0970 IPR020575 Heat shock protein Hsp90, N-terminal YPN_0970 IPR036890 YPN_0970 YPN_0970 IPR037196 YPN_0970 YPN_0971 IPR000850 Adenylate kinase/UMP-CMP kinase YPN_0971 IPR006259 Adenylate kinase subfamily YPN_0971 IPR007862 Adenylate kinase, active site lid domain YPN_0971 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_0971 IPR033690 YPN_0971 YPN_0972 IPR001015 Ferrochelatase YPN_0972 IPR019772 Ferrochelatase, active site YPN_0973 IPR001041 2Fe-2S ferredoxin-type domain YPN_0973 IPR001221 Phenol hydroxylase reductase YPN_0973 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_0973 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPN_0973 IPR008333 Oxidoreductase, FAD-binding domain YPN_0973 IPR012675 Beta-grasp domain YPN_0973 IPR017938 Riboflavin synthase-like beta-barrel YPN_0973 IPR036010 YPN_0973 YPN_0973 IPR039261 YPN_0973 YPN_0974 IPR005835 Nucleotidyl transferase YPN_0974 IPR013446 Glucose-1-phosphate cytidylyltransferase YPN_0974 IPR029044 Nucleotide-diphospho-sugar transferases YPN_0975 IPR036291 YPN_0975 YPN_0976 IPR013445 CDP-glucose 4,6-dehydratase YPN_0976 IPR016040 NAD(P)-binding domain YPN_0976 IPR036291 YPN_0976 YPN_0977 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPN_0977 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_0977 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_0977 IPR015424 Pyridoxal phosphate-dependent transferase YPN_0978 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_0978 IPR036291 YPN_0978 YPN_0979 IPR036188 YPN_0979 YPN_0981 IPR001173 Glycosyltransferase 2-like YPN_0981 IPR029044 Nucleotide-diphospho-sugar transferases YPN_0984 IPR001296 Glycosyl transferase, family 1 YPN_0984 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain YPN_0985 IPR016040 NAD(P)-binding domain YPN_0985 IPR036291 YPN_0985 YPN_0986 IPR016040 NAD(P)-binding domain YPN_0986 IPR036291 YPN_0986 YPN_0987 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_0987 IPR028614 GDP-L-fucose synthase YPN_0987 IPR036291 YPN_0987 YPN_0988 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal YPN_0988 IPR005835 Nucleotidyl transferase YPN_0988 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YPN_0988 IPR011051 RmlC-like cupin domain YPN_0988 IPR014710 RmlC-like jelly roll fold YPN_0988 IPR029044 Nucleotide-diphospho-sugar transferases YPN_0989 IPR001173 Glycosyltransferase 2-like YPN_0989 IPR029044 Nucleotide-diphospho-sugar transferases YPN_0990 IPR005841 Alpha-D-phosphohexomutase superfamily YPN_0990 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPN_0990 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPN_0990 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPN_0990 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPN_0990 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPN_0990 IPR016066 Alpha-D-phosphohexomutase, conserved site YPN_0990 IPR036900 YPN_0990 YPN_0991 IPR001207 Transposase, mutator type YPN_0992 IPR001207 Transposase, mutator type YPN_0993 IPR003856 Lipopolysaccharide biosynthesis YPN_0994 IPR011611 Carbohydrate kinase PfkB YPN_0994 IPR029056 Ribokinase-like YPN_0995 IPR003148 Regulator of K+ conductance, N-terminal YPN_0995 IPR004771 K+/H+ exchanger YPN_0995 IPR006153 Cation/H+ exchanger YPN_0995 IPR036291 YPN_0995 YPN_0995 IPR038770 YPN_0995 YPN_0996 IPR011701 Major facilitator superfamily YPN_0996 IPR036259 YPN_0996 YPN_0997 IPR006146 5'-Nucleotidase, conserved site YPN_0997 IPR029052 Metallo-dependent phosphatase-like YPN_0998 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPN_0998 IPR006146 5'-Nucleotidase, conserved site YPN_0998 IPR006179 5'-Nucleotidase/apyrase YPN_0998 IPR029052 Metallo-dependent phosphatase-like YPN_0999 IPR006179 5'-Nucleotidase/apyrase YPN_0999 IPR008334 5'-Nucleotidase, C-terminal YPN_0999 IPR036907 YPN_0999 YPN_1001 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPN_1001 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPN_1001 IPR036754 YPN_1001 YPN_1002 IPR002816 Pheromone shutdown, TraB YPN_1003 IPR001757 Cation-transporting P-type ATPase YPN_1003 IPR006121 Heavy metal-associated domain, HMA YPN_1003 IPR008250 P-type ATPase, A domain YPN_1003 IPR017969 Heavy-metal-associated, conserved site YPN_1003 IPR018303 P-type ATPase, phosphorylation site YPN_1003 IPR023214 HAD-like domain YPN_1003 IPR023298 P-type ATPase, transmembrane domain YPN_1003 IPR023299 P-type ATPase, cytoplasmic domain N YPN_1003 IPR027256 Cation-transporting P-type ATPase, subfamily IB YPN_1003 IPR036163 YPN_1003 YPN_1003 IPR036412 YPN_1003 YPN_1004 IPR000551 MerR-type HTH domain YPN_1004 IPR009061 DNA binding domain, putative YPN_1004 IPR011789 Cu(I)-responsive transcriptional regulator YPN_1005 IPR002810 NfeD-like, C-terminal domain YPN_1006 IPR001107 Band 7 protein YPN_1006 IPR001972 Stomatin family YPN_1006 IPR018080 Band 7/stomatin-like, conserved site YPN_1006 IPR036013 YPN_1006 YPN_1007 IPR011990 Tetratricopeptide-like helical domain YPN_1007 IPR013766 Thioredoxin domain YPN_1007 IPR036249 YPN_1007 YPN_1008 IPR002347 Glucose/ribitol dehydrogenase YPN_1008 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_1008 IPR036291 YPN_1008 YPN_1009 IPR008265 Lipase, GDSL, active site YPN_1009 IPR013830 YPN_1009 YPN_1009 IPR036514 YPN_1009 YPN_1010 IPR003439 ABC transporter-like YPN_1010 IPR003593 AAA+ ATPase domain YPN_1010 IPR017871 ABC transporter, conserved site YPN_1010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1011 IPR003838 Permease FtsX-like YPN_1012 IPR002686 Transposase IS200-like YPN_1012 IPR036515 YPN_1012 YPN_1013 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPN_1013 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YPN_1013 IPR011054 Rudiment single hybrid motif YPN_1013 IPR013815 ATP-grasp fold, subdomain 1 YPN_1013 IPR016185 Pre-ATP-grasp domain YPN_1014 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain YPN_1014 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE YPN_1014 IPR033747 YPN_1014 YPN_1014 IPR035893 YPN_1014 YPN_1015 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPN_1015 IPR010138 UDP-2,3-diacylglucosamine hydrolase YPN_1015 IPR029052 Metallo-dependent phosphatase-like YPN_1016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPN_1016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPN_1016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPN_1016 IPR029000 Cyclophilin-like domain YPN_1017 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPN_1017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YPN_1017 IPR015803 Cysteine-tRNA ligase YPN_1017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YPN_1017 IPR032678 YPN_1017 YPN_1018 IPR002686 Transposase IS200-like YPN_1018 IPR036515 YPN_1018 YPN_1019 IPR036986 YPN_1019 YPN_1020 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YPN_1020 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPN_1020 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPN_1020 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YPN_1020 IPR036291 YPN_1020 YPN_1023 IPR002104 Integrase, catalytic YPN_1023 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_1023 IPR013762 Integrase-like, catalytic core YPN_1024 IPR000462 CDP-alcohol phosphatidyltransferase YPN_1025 IPR000374 Phosphatidate cytidylyltransferase YPN_1026 IPR002123 Phospholipid/glycerol acyltransferase YPN_1027 IPR022742 Putative lysophospholipase YPN_1027 IPR022744 Methyltransferase domain, putative YPN_1027 IPR029058 Alpha/Beta hydrolase fold YPN_1027 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1028 IPR000340 Dual specificity phosphatase, catalytic domain YPN_1028 IPR003595 Protein-tyrosine phosphatase, catalytic YPN_1028 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain YPN_1028 IPR026841 YPN_1028 YPN_1028 IPR029021 Protein-tyrosine phosphatase-like YPN_1031 IPR001270 ClpA/B family YPN_1031 IPR002611 IstB-like ATP-binding protein YPN_1031 IPR003593 AAA+ ATPase domain YPN_1031 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1031 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_1032 IPR001584 Integrase, catalytic core YPN_1032 IPR006120 Resolvase, HTH domain YPN_1032 IPR009057 Homeodomain-like YPN_1032 IPR012337 Ribonuclease H-like domain YPN_1033 IPR000847 Transcription regulator HTH, LysR YPN_1033 IPR005119 LysR, substrate-binding YPN_1033 IPR036388 YPN_1033 YPN_1033 IPR036390 YPN_1033 YPN_1034 IPR023210 NADP-dependent oxidoreductase domain YPN_1034 IPR036812 YPN_1034 YPN_1035 IPR018170 Aldo/keto reductase, conserved site YPN_1035 IPR020471 Aldo/keto reductase subgroup YPN_1035 IPR023210 NADP-dependent oxidoreductase domain YPN_1035 IPR036812 YPN_1035 YPN_1038 IPR001764 Glycoside hydrolase, family 3, N-terminal YPN_1038 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPN_1038 IPR013783 Immunoglobulin-like fold YPN_1038 IPR017853 Glycoside hydrolase, superfamily YPN_1038 IPR019800 Glycoside hydrolase, family 3, active site YPN_1038 IPR026891 Fibronectin type III-like domain YPN_1038 IPR036881 YPN_1038 YPN_1038 IPR036962 YPN_1038 YPN_1039 IPR025833 GDYXXLXY protein YPN_1040 IPR018677 Protein of unknown function DUF2157, membrane YPN_1040 IPR025513 Domain of unknown function DUF4401 YPN_1042 IPR001207 Transposase, mutator type YPN_1044 IPR021561 Protein of unknown function DUF2893 YPN_1044 IPR033455 YPN_1044 YPN_1045 IPR003991 Pertactin virulence factor family YPN_1045 IPR004899 Pertactin, central region YPN_1045 IPR005546 Autotransporter beta-domain YPN_1045 IPR006315 Outer membrane autotransporter barrel YPN_1045 IPR011050 Pectin lyase fold/virulence factor YPN_1045 IPR036709 YPN_1045 YPN_1048 IPR008514 Type VI secretion system effector, Hcp YPN_1048 IPR036624 YPN_1048 YPN_1049 IPR010665 Protein of unknown function DUF1240 YPN_1051 IPR010665 Protein of unknown function DUF1240 YPN_1054 IPR010982 Lambda repressor-like, DNA-binding domain YPN_1054 IPR038722 YPN_1054 YPN_1055 IPR001264 Glycosyl transferase, family 51 YPN_1055 IPR001460 Penicillin-binding protein, transpeptidase YPN_1055 IPR009647 Penicillin-binding, C-terminal YPN_1055 IPR011815 Penicillin-binding protein 1C YPN_1055 IPR012338 Beta-lactamase/transpeptidase-like YPN_1055 IPR023346 Lysozyme-like domain YPN_1055 IPR036950 YPN_1055 YPN_1056 IPR002686 Transposase IS200-like YPN_1056 IPR036515 YPN_1056 YPN_1057 IPR001599 Alpha-2-macroglobulin YPN_1057 IPR002890 Alpha-2-macroglobulin, N-terminal YPN_1057 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPN_1057 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YPN_1058 IPR009898 Protein of unknown function DUF1440 YPN_1060 IPR000281 Helix-turn-helix protein RpiR YPN_1060 IPR001347 Sugar isomerase (SIS) YPN_1060 IPR009057 Homeodomain-like YPN_1060 IPR036388 YPN_1060 YPN_1061 IPR010061 Methylmalonate-semialdehyde dehydrogenase YPN_1061 IPR015590 Aldehyde dehydrogenase domain YPN_1061 IPR016160 Aldehyde dehydrogenase, cysteine active site YPN_1061 IPR016161 Aldehyde/histidinol dehydrogenase YPN_1061 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_1061 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_1062 IPR000399 TPP-binding enzyme, conserved site YPN_1062 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPN_1062 IPR012000 Thiamine pyrophosphate enzyme, central domain YPN_1062 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPN_1062 IPR029035 DHS-like NAD/FAD-binding domain YPN_1062 IPR029061 Thiamin diphosphate-binding fold YPN_1062 IPR030817 YPN_1062 YPN_1063 IPR000683 Oxidoreductase, N-terminal YPN_1063 IPR036291 YPN_1063 YPN_1064 IPR004104 Oxidoreductase, C-terminal YPN_1065 IPR025997 Periplasmic binding protein domain YPN_1065 IPR028082 Periplasmic binding protein-like I YPN_1066 IPR003439 ABC transporter-like YPN_1066 IPR003593 AAA+ ATPase domain YPN_1066 IPR017871 ABC transporter, conserved site YPN_1066 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1067 IPR001851 ABC transporter, permease YPN_1068 IPR000683 Oxidoreductase, N-terminal YPN_1068 IPR004104 Oxidoreductase, C-terminal YPN_1068 IPR036291 YPN_1068 YPN_1069 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPN_1069 IPR011611 Carbohydrate kinase PfkB YPN_1069 IPR013785 Aldolase-type TIM barrel YPN_1069 IPR018659 Protein of unknown function DUF2090 YPN_1069 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain YPN_1069 IPR029056 Ribokinase-like YPN_1069 IPR030830 YPN_1069 YPN_1070 IPR013022 Xylose isomerase-like, TIM barrel domain YPN_1070 IPR030823 YPN_1070 YPN_1070 IPR036237 YPN_1070 YPN_1071 IPR011051 RmlC-like cupin domain YPN_1071 IPR014710 RmlC-like jelly roll fold YPN_1071 IPR021120 KduI/IolB isomerase YPN_1071 IPR024203 5-deoxy-glucuronate isomerase, IolB YPN_1073 IPR003439 ABC transporter-like YPN_1073 IPR003593 AAA+ ATPase domain YPN_1073 IPR011527 ABC transporter type 1, transmembrane domain YPN_1073 IPR017871 ABC transporter, conserved site YPN_1073 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1073 IPR036640 YPN_1073 YPN_1074 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPN_1074 IPR011008 Dimeric alpha-beta barrel YPN_1075 IPR015065 Glycogen synthesis protein YPN_1075 IPR036745 YPN_1075 YPN_1078 IPR000792 Transcription regulator LuxR, C-terminal YPN_1078 IPR016032 Signal transduction response regulator, C-terminal effector YPN_1078 IPR036388 YPN_1078 YPN_1079 IPR002059 Cold-shock protein, DNA-binding YPN_1079 IPR012340 Nucleic acid-binding, OB-fold YPN_1081 IPR003691 Putative fluoride ion transporter CrcB YPN_1082 IPR003369 Sec-independent protein translocase protein TatA/B/E YPN_1082 IPR006312 Sec-independent protein translocase protein TatA/E YPN_1082 IPR024905 Sec-independent protein translocase protein TatE YPN_1083 IPR003698 Lipoyl synthase YPN_1083 IPR006638 Elongator protein 3/MiaB/NifB YPN_1083 IPR007197 Radical SAM YPN_1083 IPR013785 Aldolase-type TIM barrel YPN_1083 IPR031691 YPN_1083 YPN_1084 IPR000544 Octanoyltransferase YPN_1084 IPR004143 Biotin/lipoate A/B protein ligase YPN_1084 IPR020605 Octanoyltransferase, conserved site YPN_1085 IPR007454 Uncharacterised protein family UPF0250 YPN_1085 IPR027471 YbeD-like domain YPN_1086 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPN_1086 IPR012338 Beta-lactamase/transpeptidase-like YPN_1086 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPN_1086 IPR015956 Penicillin-binding protein-associated YPN_1086 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPN_1086 IPR037167 YPN_1086 YPN_1087 IPR007730 Sporulation-related domain YPN_1087 IPR009009 RlpA-like double-psi beta-barrel domain YPN_1087 IPR012997 Rare lipoprotein A, bacterial YPN_1087 IPR034718 YPN_1087 YPN_1087 IPR036680 YPN_1087 YPN_1087 IPR036908 YPN_1087 YPN_1088 IPR001182 Cell cycle protein FtsW/RodA YPN_1088 IPR011923 Rod shape-determining protein RodA YPN_1088 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPN_1089 IPR001460 Penicillin-binding protein, transpeptidase YPN_1089 IPR005311 Penicillin-binding protein, dimerisation domain YPN_1089 IPR012338 Beta-lactamase/transpeptidase-like YPN_1089 IPR017790 Penicillin-binding protein 2 YPN_1089 IPR036138 YPN_1089 YPN_1090 IPR003742 SPOUT methyltransferase, predicted YPN_1090 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_1090 IPR029028 Alpha/beta knot methyltransferases YPN_1091 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPN_1092 IPR004821 Cytidyltransferase-like domain YPN_1092 IPR005248 Probable nicotinate-nucleotide adenylyltransferase YPN_1092 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1093 IPR005790 DNA polymerase III, delta subunit YPN_1093 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPN_1093 IPR010372 DNA polymerase III, delta YPN_1093 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1093 IPR032780 YPN_1093 YPN_1094 IPR007485 Lipopolysaccharide assembly, LptE YPN_1095 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_1095 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPN_1095 IPR002302 Leucine-tRNA ligase YPN_1095 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPN_1095 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPN_1095 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPN_1095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1095 IPR025709 Leucyl-tRNA synthetase, editing domain YPN_1096 IPR009912 Protein of unknown function DUF1451 YPN_1097 IPR003439 ABC transporter-like YPN_1097 IPR003593 AAA+ ATPase domain YPN_1097 IPR017871 ABC transporter, conserved site YPN_1097 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1097 IPR030679 YPN_1097 YPN_1098 IPR000515 MetI-like domain YPN_1098 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_1098 IPR035906 YPN_1098 YPN_1099 IPR000515 MetI-like domain YPN_1099 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_1099 IPR035906 YPN_1099 YPN_1100 IPR001638 Extracellular solute-binding protein, family 3 YPN_1101 IPR003010 Carbon-nitrogen hydrolase YPN_1101 IPR004563 Apolipoprotein N-acyltransferase YPN_1101 IPR036526 YPN_1101 YPN_1102 IPR000644 CBS domain YPN_1102 IPR005170 Transporter-associated domain YPN_1102 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_1102 IPR036318 YPN_1102 YPN_1104 IPR002036 Endoribonuclease YbeY YPN_1104 IPR020549 Endoribonuclease YbeY, conserved site YPN_1104 IPR023091 Metalloprotease catalytic domain, predicted YPN_1105 IPR003714 PhoH-like protein YPN_1105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1106 IPR002792 TRAM domain YPN_1106 IPR005839 Methylthiotransferase YPN_1106 IPR006463 tRNA-i(6)A37 modification enzyme MiaB YPN_1106 IPR006638 Elongator protein 3/MiaB/NifB YPN_1106 IPR007197 Radical SAM YPN_1106 IPR013848 Methylthiotransferase, N-terminal YPN_1106 IPR020612 Methylthiotransferase, conserved site YPN_1106 IPR023404 Radical SAM, alpha/beta horseshoe YPN_1106 IPR038135 YPN_1106 YPN_1107 IPR002938 Monooxygenase, FAD-binding YPN_1107 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPN_1107 IPR036188 YPN_1107 YPN_1109 IPR001962 Asparagine synthase YPN_1109 IPR006426 Asparagine synthase, glutamine-hydrolyzing YPN_1109 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1109 IPR017932 Glutamine amidotransferase type 2 domain YPN_1109 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_1110 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPN_1110 IPR023214 HAD-like domain YPN_1110 IPR036412 YPN_1110 YPN_1111 IPR000600 ROK YPN_1111 IPR000835 MarR-type HTH domain YPN_1111 IPR036388 YPN_1111 YPN_1111 IPR036390 YPN_1111 YPN_1112 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPN_1112 IPR006680 Amidohydrolase 1 YPN_1112 IPR011059 Metal-dependent hydrolase, composite domain YPN_1112 IPR032466 YPN_1112 YPN_1113 IPR004547 Glucosamine-6-phosphate isomerase YPN_1113 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YPN_1113 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YPN_1113 IPR037171 YPN_1113 YPN_1114 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPN_1114 IPR001996 Phosphotransferase system, IIB component, type 1 YPN_1114 IPR003352 Phosphotransferase system, EIIC YPN_1114 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPN_1114 IPR011055 Duplicated hybrid motif YPN_1114 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPN_1114 IPR036878 YPN_1114 YPN_1115 IPR002686 Transposase IS200-like YPN_1115 IPR036515 YPN_1115 YPN_1116 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPN_1116 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_1116 IPR004514 Glutamine-tRNA synthetase YPN_1116 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YPN_1116 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1116 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YPN_1116 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPN_1116 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YPN_1116 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain YPN_1116 IPR022861 Glutamine-tRNA ligase, bacterial YPN_1117 IPR005318 Outer membrane porin, bacterial YPN_1117 IPR023614 Porin domain YPN_1118 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain YPN_1118 IPR008965 Carbohydrate-binding domain YPN_1118 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain YPN_1119 IPR004867 Chitobiase/beta-hexosaminidase C-terminal domain YPN_1119 IPR013783 Immunoglobulin-like fold YPN_1119 IPR014756 Immunoglobulin E-set YPN_1119 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal YPN_1119 IPR015883 Glycoside hydrolase family 20, catalytic core YPN_1119 IPR017853 Glycoside hydrolase, superfamily YPN_1119 IPR025705 Beta-hexosaminidase YPN_1119 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like YPN_1120 IPR002481 Ferric-uptake regulator YPN_1120 IPR036388 YPN_1120 YPN_1120 IPR036390 YPN_1120 YPN_1121 IPR001226 Flavodoxin, conserved site YPN_1121 IPR008254 Flavodoxin/nitric oxide synthase YPN_1121 IPR010086 Flavodoxin, long chain YPN_1121 IPR029039 Flavoprotein-like YPN_1122 IPR002145 Ribbon-helix-helix protein, copG YPN_1123 IPR000073 Alpha/beta hydrolase fold-1 YPN_1123 IPR029058 Alpha/Beta hydrolase fold YPN_1125 IPR002514 Transposase IS3/IS911family YPN_1125 IPR009057 Homeodomain-like YPN_1126 IPR010998 Integrase, Lambda-type, N-terminal YPN_1126 IPR025166 Domain of unknown function DUF4102 YPN_1126 IPR038488 YPN_1126 YPN_1127 IPR002611 IstB-like ATP-binding protein YPN_1127 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1128 IPR002611 IstB-like ATP-binding protein YPN_1128 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1129 IPR001584 Integrase, catalytic core YPN_1129 IPR006120 Resolvase, HTH domain YPN_1129 IPR009057 Homeodomain-like YPN_1129 IPR012337 Ribonuclease H-like domain YPN_1130 IPR002509 Polysaccharide deacetylase YPN_1130 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_1131 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPN_1132 IPR000515 MetI-like domain YPN_1132 IPR035906 YPN_1132 YPN_1133 IPR000644 CBS domain YPN_1133 IPR003439 ABC transporter-like YPN_1133 IPR003593 AAA+ ATPase domain YPN_1133 IPR005892 Glycine betaine transport ATP-binding subunit YPN_1133 IPR017871 ABC transporter, conserved site YPN_1133 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1134 IPR000358 Ribonucleotide reductase small subunit YPN_1134 IPR009078 Ferritin-like superfamily YPN_1134 IPR012348 Ribonucleotide reductase-related YPN_1134 IPR026494 Ribonucleoside reductase subunit beta, NrdF YPN_1134 IPR030475 YPN_1134 YPN_1135 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPN_1135 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPN_1135 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPN_1135 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPN_1135 IPR013554 Ribonucleotide reductase N-terminal YPN_1135 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPN_1136 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPN_1136 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPN_1136 IPR029039 Flavoprotein-like YPN_1137 IPR002109 Glutaredoxin YPN_1137 IPR011909 Glutaredoxin-like protein NrdH YPN_1137 IPR036249 YPN_1137 YPN_1138 IPR009435 Acid shock YPN_1138 IPR023497 Acid shock protein YPN_1139 IPR018994 Protein of unknown function DUF2002 YPN_1140 IPR009587 Protein of unknown function DUF1198 YPN_1141 IPR006983 MbeD/MobD-like YPN_1142 IPR002059 Cold-shock protein, DNA-binding YPN_1142 IPR011129 Cold shock protein YPN_1142 IPR012156 Cold shock, CspA YPN_1142 IPR012340 Nucleic acid-binding, OB-fold YPN_1142 IPR019844 Cold-shock conserved site YPN_1143 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_1143 IPR030678 YPN_1143 YPN_1144 IPR000515 MetI-like domain YPN_1144 IPR035906 YPN_1144 YPN_1145 IPR000515 MetI-like domain YPN_1145 IPR035906 YPN_1145 YPN_1146 IPR003439 ABC transporter-like YPN_1146 IPR003593 AAA+ ATPase domain YPN_1146 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1147 IPR003439 ABC transporter-like YPN_1147 IPR003593 AAA+ ATPase domain YPN_1147 IPR017871 ABC transporter, conserved site YPN_1147 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1149 IPR002026 Urease, gamma/gamma-beta subunit YPN_1149 IPR012010 Urease, gamma subunit YPN_1149 IPR036463 YPN_1149 YPN_1150 IPR002019 Urease, beta subunit YPN_1150 IPR036461 YPN_1150 YPN_1151 IPR005848 Urease, alpha subunit YPN_1151 IPR006680 Amidohydrolase 1 YPN_1151 IPR011059 Metal-dependent hydrolase, composite domain YPN_1151 IPR011612 Urease alpha-subunit, N-terminal domain YPN_1151 IPR017950 Urease active site YPN_1151 IPR029754 Urease nickel binding site YPN_1151 IPR032466 YPN_1151 YPN_1152 IPR004029 UreE urease accessory, N-terminal YPN_1152 IPR007864 Urease accessory protein UreE, C-terminal domain YPN_1152 IPR012406 Urease accessory protein UreE YPN_1152 IPR036118 YPN_1152 YPN_1153 IPR002639 Urease accessory protein UreF YPN_1153 IPR038277 YPN_1153 YPN_1154 IPR003495 CobW/HypB/UreG domain YPN_1154 IPR004400 Urease accessory protein UreG YPN_1154 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase YPN_1154 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1155 IPR002669 Urease accessory protein UreD YPN_1157 IPR004937 Urea transporter YPN_1157 IPR017807 Urea transporter, bacteria YPN_1157 IPR029020 Ammonium/urea transporter YPN_1158 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria YPN_1158 IPR011541 Nickel/cobalt transporter, high-affinity YPN_1159 IPR010486 HNS-dependent expression A/B YPN_1159 IPR028623 HNS-dependent expression B YPN_1159 IPR036831 YPN_1159 YPN_1159 IPR038303 YPN_1159 YPN_1160 IPR003148 Regulator of K+ conductance, N-terminal YPN_1160 IPR013099 Two pore domain potassium channel domain YPN_1160 IPR036291 YPN_1160 YPN_1161 IPR003691 Putative fluoride ion transporter CrcB YPN_1162 IPR003691 Putative fluoride ion transporter CrcB YPN_1164 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPN_1164 IPR036095 YPN_1164 YPN_1165 IPR003352 Phosphotransferase system, EIIC YPN_1165 IPR004501 Phosphotransferase system, EIIC component, type 3 YPN_1165 IPR004796 Phosphotransferase system, cellobiose-type IIC component YPN_1166 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit YPN_1166 IPR036542 YPN_1166 YPN_1167 IPR009057 Homeodomain-like YPN_1167 IPR011051 RmlC-like cupin domain YPN_1167 IPR013096 Cupin 2, conserved barrel YPN_1167 IPR014710 RmlC-like jelly roll fold YPN_1167 IPR018060 DNA binding HTH domain, AraC-type YPN_1167 IPR018062 HTH domain AraC-type, conserved site YPN_1167 IPR020449 Transcription regulator HTH, AraC- type YPN_1168 IPR006879 Uncharacterised protein family UPF0249/HpnK YPN_1168 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_1168 IPR022948 Uncharacterised protein family UPF0249 YPN_1170 IPR005621 Regulation modulator SeqA YPN_1170 IPR010985 Ribbon-helix-helix YPN_1170 IPR013321 Arc-type ribbon-helix-helix YPN_1170 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YPN_1170 IPR033761 YPN_1170 YPN_1170 IPR036835 YPN_1170 YPN_1171 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPN_1171 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPN_1171 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPN_1171 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPN_1171 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YPN_1171 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPN_1171 IPR016066 Alpha-D-phosphohexomutase, conserved site YPN_1171 IPR036900 YPN_1171 YPN_1174 IPR000620 Drug/metabolite transporter YPN_1175 IPR001789 Signal transduction response regulator, receiver domain YPN_1175 IPR001867 Signal transduction response regulator, C-terminal YPN_1175 IPR011006 CheY-like superfamily YPN_1175 IPR036388 YPN_1175 YPN_1176 IPR003018 GAF domain YPN_1176 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1176 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1176 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YPN_1176 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1176 IPR025201 Sensor protein KdpD, transmembrane domain YPN_1176 IPR029016 GAF domain-like YPN_1176 IPR036097 YPN_1176 YPN_1176 IPR036890 YPN_1176 YPN_1176 IPR038318 YPN_1176 YPN_1177 IPR003820 Potassium-transporting ATPase C chain YPN_1178 IPR001757 Cation-transporting P-type ATPase YPN_1178 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA YPN_1178 IPR008250 P-type ATPase, A domain YPN_1178 IPR018303 P-type ATPase, phosphorylation site YPN_1178 IPR023298 P-type ATPase, transmembrane domain YPN_1178 IPR023299 P-type ATPase, cytoplasmic domain N YPN_1178 IPR036412 YPN_1178 YPN_1179 IPR004623 Potassium-transporting ATPase A chain YPN_1180 IPR011726 K+ transporting P-type ATPase, F subunit YPN_1181 IPR019663 Uncharacterised protein YbfA YPN_1182 IPR013560 Domain of unknown function DUF1722 YPN_1183 IPR002081 Cryptochrome/DNA photolyase, class 1 YPN_1183 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal YPN_1183 IPR006050 DNA photolyase, N-terminal YPN_1183 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1183 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal YPN_1183 IPR036134 YPN_1183 YPN_1183 IPR036155 YPN_1183 YPN_1184 IPR000396 Cyclic-AMP phosphodiesterase, class-II YPN_1184 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YPN_1184 IPR036866 YPN_1184 YPN_1185 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPN_1185 IPR036069 YPN_1185 YPN_1186 IPR003833 Allophanate hydrolase subunit 1 YPN_1186 IPR010016 Sensor histidine kinase inhibitor, KipI family YPN_1186 IPR029000 Cyclophilin-like domain YPN_1187 IPR003778 Allophanate hydrolase subunit 2 YPN_1187 IPR029000 Cyclophilin-like domain YPN_1188 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YPN_1188 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_1189 IPR010374 Protein of unknown function DUF969 YPN_1190 IPR009323 Protein of unknown function DUF979 YPN_1191 IPR000816 Peptidase C15, pyroglutamyl peptidase I YPN_1191 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPN_1191 IPR029762 Pyroglutamyl peptidase I, bacterial-type YPN_1191 IPR033693 YPN_1191 YPN_1191 IPR033694 YPN_1191 YPN_1191 IPR036440 YPN_1191 YPN_1192 IPR002043 Uracil-DNA glycosylase YPN_1192 IPR005122 Uracil-DNA glycosylase-like YPN_1192 IPR018085 Uracil-DNA glycosylase, active site YPN_1192 IPR036895 YPN_1192 YPN_1193 IPR001150 Glycine radical domain YPN_1193 IPR011140 Autonomous glycyl radical cofactor GrcA YPN_1193 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPN_1194 IPR024499 Protein of unknown function DUF2974 YPN_1194 IPR029058 Alpha/Beta hydrolase fold YPN_1195 IPR002110 Ankyrin repeat YPN_1195 IPR036770 YPN_1195 YPN_1196 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPN_1196 IPR001650 Helicase, C-terminal YPN_1196 IPR011545 DEAD/DEAH box helicase domain YPN_1196 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_1196 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1196 IPR028621 ATP-dependent RNA helicase SrmB YPN_1197 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_1197 IPR007848 Methyltransferase small domain YPN_1197 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YPN_1197 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1198 IPR003953 FAD binding domain YPN_1198 IPR005288 L-aspartate oxidase YPN_1198 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPN_1198 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPN_1198 IPR036188 YPN_1198 YPN_1198 IPR037099 YPN_1198 YPN_1199 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YPN_1199 IPR007627 RNA polymerase sigma-70 region 2 YPN_1199 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YPN_1199 IPR013324 RNA polymerase sigma factor, region 3/4 YPN_1199 IPR013325 RNA polymerase sigma factor, region 2 YPN_1199 IPR014284 RNA polymerase sigma-70 like domain YPN_1199 IPR014286 RNA polymerase sigma-70 RpoE type YPN_1199 IPR036388 YPN_1199 YPN_1200 IPR005572 Anti sigma-E protein RseA, N-terminal YPN_1200 IPR005573 Anti sigma-E protein RseA, C-terminal YPN_1200 IPR026279 Sigma-E factor negative regulatory protein RseA YPN_1200 IPR036147 YPN_1200 YPN_1201 IPR005588 MucB/RseB YPN_1201 IPR033434 YPN_1201 YPN_1201 IPR033436 YPN_1201 YPN_1201 IPR038484 YPN_1201 YPN_1202 IPR026268 Protein RseC YPN_1204 IPR000640 Translation elongation factor EFG, V domain YPN_1204 IPR000795 Elongation factor, GTP-binding domain YPN_1204 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPN_1204 IPR005225 Small GTP-binding protein domain YPN_1204 IPR006297 Elongation factor 4 YPN_1204 IPR013842 GTP-binding protein LepA, C-terminal YPN_1204 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1204 IPR031157 YPN_1204 YPN_1204 IPR035647 YPN_1204 YPN_1204 IPR038363 YPN_1204 YPN_1205 IPR000223 Peptidase S26A, signal peptidase I YPN_1205 IPR015927 Peptidase S24/S26A/S26B/S26C YPN_1205 IPR019533 Peptidase S26 YPN_1205 IPR019756 Peptidase S26A, signal peptidase I, serine active site YPN_1205 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YPN_1205 IPR019758 Peptidase S26A, signal peptidase I, conserved site YPN_1205 IPR036286 YPN_1205 YPN_1206 IPR000999 Ribonuclease III domain YPN_1206 IPR011907 Ribonuclease III YPN_1206 IPR014720 Double-stranded RNA-binding domain YPN_1206 IPR036389 YPN_1206 YPN_1207 IPR004044 K Homology domain, type 2 YPN_1207 IPR005225 Small GTP-binding protein domain YPN_1207 IPR005662 GTP-binding protein Era YPN_1207 IPR006073 GTP binding domain YPN_1207 IPR009019 K homology domain, prokaryotic type YPN_1207 IPR015946 K homology domain-like, alpha/beta YPN_1207 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1208 IPR003717 Recombination protein O, RecO YPN_1208 IPR012340 Nucleic acid-binding, OB-fold YPN_1208 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPN_1208 IPR037278 YPN_1208 YPN_1209 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YPN_1209 IPR013785 Aldolase-type TIM barrel YPN_1209 IPR036130 YPN_1209 YPN_1210 IPR002582 Holo-[acyl carrier protein] synthase YPN_1210 IPR004568 Phosphopantethiene-protein transferase domain YPN_1210 IPR008278 4'-phosphopantetheinyl transferase superfamily YPN_1210 IPR037143 YPN_1210 YPN_1211 IPR002686 Transposase IS200-like YPN_1211 IPR036515 YPN_1211 YPN_1212 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_1212 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1213 IPR000281 Helix-turn-helix protein RpiR YPN_1213 IPR001347 Sugar isomerase (SIS) YPN_1213 IPR009057 Homeodomain-like YPN_1213 IPR036388 YPN_1213 YPN_1214 IPR001347 Sugar isomerase (SIS) YPN_1214 IPR005486 Glucokinase regulatory protein, conserved site YPN_1214 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YPN_1214 IPR009060 UBA-like YPN_1215 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YPN_1215 IPR023214 HAD-like domain YPN_1215 IPR036412 YPN_1215 YPN_1216 IPR016192 APOBEC/CMP deaminase, zinc-binding YPN_1216 IPR016193 Cytidine deaminase-like YPN_1216 IPR028883 tRNA-specific adenosine deaminase YPN_1217 IPR000189 Prokaryotic transglycosylase, active site YPN_1217 IPR001638 Extracellular solute-binding protein, family 3 YPN_1217 IPR008258 Lytic transglycosylase-like SLT domain YPN_1217 IPR023346 Lysozyme-like domain YPN_1217 IPR023703 Membrane-bound lytic murein transglycosylase F YPN_1218 IPR010073 Phosphoribosylformylglycinamidine synthase YPN_1218 IPR010918 AIR synthase-related protein, C-terminal domain YPN_1218 IPR029062 Class I glutamine amidotransferase-like YPN_1218 IPR036604 YPN_1218 YPN_1218 IPR036676 YPN_1218 YPN_1218 IPR036921 YPN_1218 YPN_1221 IPR002686 Transposase IS200-like YPN_1221 IPR036515 YPN_1221 YPN_1222 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1222 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1222 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1222 IPR036097 YPN_1222 YPN_1222 IPR036890 YPN_1222 YPN_1223 IPR025262 Quorum-sensing regulator protein G YPN_1224 IPR001789 Signal transduction response regulator, receiver domain YPN_1224 IPR002078 RNA polymerase sigma factor 54 interaction domain YPN_1224 IPR003593 AAA+ ATPase domain YPN_1224 IPR009057 Homeodomain-like YPN_1224 IPR011006 CheY-like superfamily YPN_1224 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPN_1224 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPN_1224 IPR025944 Sigma-54 interaction domain, conserved site YPN_1224 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1225 IPR000132 Nitrilase/cyanide hydratase, conserved site YPN_1225 IPR003010 Carbon-nitrogen hydrolase YPN_1225 IPR003694 NAD(+) synthetase YPN_1225 IPR014445 Glutamine-dependent NAD(+) synthetase YPN_1225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1225 IPR022310 NAD/GMP synthase YPN_1225 IPR036526 YPN_1225 YPN_1226 IPR002187 Nitrogen regulatory protein PII YPN_1226 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPN_1226 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPN_1226 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPN_1226 IPR017918 Nitrogen regulatory protein PII, conserved site YPN_1227 IPR032791 YPN_1227 YPN_1228 IPR001270 ClpA/B family YPN_1228 IPR002611 IstB-like ATP-binding protein YPN_1228 IPR003593 AAA+ ATPase domain YPN_1228 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1228 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_1229 IPR001584 Integrase, catalytic core YPN_1229 IPR006120 Resolvase, HTH domain YPN_1229 IPR009057 Homeodomain-like YPN_1229 IPR012337 Ribonuclease H-like domain YPN_1230 IPR032791 YPN_1230 YPN_1230 IPR036388 YPN_1230 YPN_1230 IPR036390 YPN_1230 YPN_1231 IPR000971 Globin YPN_1231 IPR001221 Phenol hydroxylase reductase YPN_1231 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_1231 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPN_1231 IPR008333 Oxidoreductase, FAD-binding domain YPN_1231 IPR009050 Globin-like YPN_1231 IPR012292 Globin, structural domain YPN_1231 IPR017938 Riboflavin synthase-like beta-barrel YPN_1231 IPR023950 Flavohemoprotein YPN_1231 IPR039261 YPN_1231 YPN_1232 IPR001085 Serine hydroxymethyltransferase YPN_1232 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1232 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1232 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1232 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YPN_1232 IPR039429 YPN_1232 YPN_1233 IPR000758 Virulence-related outer membrane protein YPN_1233 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_1233 IPR027385 Outer membrane protein beta-barrel YPN_1234 IPR024989 Major facilitator superfamily associated domain YPN_1234 IPR026032 Phenylproprionate/maltose permease YPN_1234 IPR036259 YPN_1234 YPN_1235 IPR011608 PRD domain YPN_1235 IPR036634 YPN_1235 YPN_1236 IPR010412 Protein of unknown function DUF1007 YPN_1236 IPR016537 Uncharacterised conserved protein UCP008159, YPN_1237 IPR011541 Nickel/cobalt transporter, high-affinity YPN_1238 IPR000760 Inositol monophosphatase YPN_1238 IPR020550 Inositol monophosphatase, conserved site YPN_1238 IPR020583 Inositol monophosphatase, metal-binding site YPN_1238 IPR022337 Inositol monophosphatase, SuhB YPN_1239 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPN_1239 IPR004384 RNA methyltransferase TrmH, group 1 YPN_1239 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_1239 IPR029028 Alpha/beta knot methyltransferases YPN_1240 IPR000944 Transcription regulator Rrf2-like YPN_1240 IPR010242 Transcription factor HTH, IscR YPN_1240 IPR030489 YPN_1240 YPN_1240 IPR036388 YPN_1240 YPN_1240 IPR036390 YPN_1240 YPN_1241 IPR000192 Aminotransferase class V domain YPN_1241 IPR010240 Cysteine desulfurase YPN_1241 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1241 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1241 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1241 IPR016454 Cysteine desulfurase, NifS YPN_1241 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPN_1242 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YPN_1242 IPR011339 ISC system FeS cluster assembly, IscU scaffold YPN_1243 IPR000361 FeS cluster biogenesis YPN_1243 IPR011302 ISC system FeS cluster assembly, IscA scaffold YPN_1243 IPR016092 FeS cluster insertion protein YPN_1243 IPR017870 FeS cluster insertion, C-terminal, conserved site YPN_1243 IPR035903 YPN_1243 YPN_1244 IPR001623 DnaJ domain YPN_1244 IPR004640 Co-chaperone Hsc20 YPN_1244 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YPN_1244 IPR036386 YPN_1244 YPN_1244 IPR036869 YPN_1244 YPN_1245 IPR010236 ISC system FeS cluster assembly, HscA chaperone YPN_1245 IPR013126 Heat shock protein 70 family YPN_1245 IPR018181 Heat shock protein 70, conserved site YPN_1245 IPR029047 Heat shock protein 70kD, peptide-binding domain YPN_1245 IPR029048 Heat shock protein 70kD, C-terminal domain YPN_1246 IPR001041 2Fe-2S ferredoxin-type domain YPN_1246 IPR001055 Adrenodoxin YPN_1246 IPR011536 Ferredoxin, 2Fe-2S type YPN_1246 IPR012675 Beta-grasp domain YPN_1246 IPR018298 Adrenodoxin, iron-sulphur binding site YPN_1246 IPR036010 YPN_1246 YPN_1247 IPR007479 ISC system FeS cluster assembly, IscX YPN_1247 IPR036762 YPN_1247 YPN_1248 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPN_1248 IPR008330 Peptidase M17, peptidase B YPN_1248 IPR011356 Leucine aminopeptidase/peptidase B YPN_1249 IPR009839 SseB protein N-terminal domain YPN_1249 IPR027945 SseB protein, C-terminal YPN_1250 IPR003991 Pertactin virulence factor family YPN_1250 IPR005546 Autotransporter beta-domain YPN_1250 IPR006315 Outer membrane autotransporter barrel YPN_1250 IPR036709 YPN_1250 YPN_1251 IPR004899 Pertactin, central region YPN_1251 IPR005546 Autotransporter beta-domain YPN_1251 IPR006315 Outer membrane autotransporter barrel YPN_1251 IPR011050 Pectin lyase fold/virulence factor YPN_1251 IPR012332 P22 tailspike C-terminal domain-like YPN_1251 IPR036709 YPN_1251 YPN_1252 IPR004899 Pertactin, central region YPN_1252 IPR005546 Autotransporter beta-domain YPN_1252 IPR006315 Outer membrane autotransporter barrel YPN_1252 IPR011050 Pectin lyase fold/virulence factor YPN_1252 IPR012332 P22 tailspike C-terminal domain-like YPN_1252 IPR030930 YPN_1252 YPN_1252 IPR036709 YPN_1252 YPN_1254 IPR001064 Beta/gamma crystallin YPN_1254 IPR011024 Gamma-crystallin-related YPN_1254 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal YPN_1254 IPR015185 Exotoxin A, binding YPN_1255 IPR001564 Nucleoside diphosphate kinase YPN_1255 IPR023005 Nucleoside diphosphate kinase, active site YPN_1255 IPR034907 YPN_1255 YPN_1255 IPR036850 YPN_1255 YPN_1256 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YPN_1256 IPR007197 Radical SAM YPN_1256 IPR013785 Aldolase-type TIM barrel YPN_1256 IPR027492 Dual-specificity RNA methyltransferase RlmN YPN_1257 IPR011990 Tetratricopeptide-like helical domain YPN_1257 IPR013360 Pilus biogenesis/stability type IV, PilW YPN_1257 IPR019734 Tetratricopeptide repeat YPN_1258 IPR001387 Cro/C1-type helix-turn-helix domain YPN_1258 IPR010982 Lambda repressor-like, DNA-binding domain YPN_1258 IPR023690 Cytoskeleton protein RodZ YPN_1258 IPR025194 Domain of unknown function DUF4115 YPN_1259 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YPN_1259 IPR011005 Dihydropteroate synthase-like YPN_1259 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YPN_1259 IPR036849 YPN_1259 YPN_1260 IPR004154 Anticodon-binding YPN_1260 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YPN_1260 IPR015807 Histidine-tRNA ligase YPN_1260 IPR036621 YPN_1260 YPN_1261 IPR011990 Tetratricopeptide-like helical domain YPN_1261 IPR018704 Domain of unknown function DUF09976 YPN_1261 IPR026039 Uncharacterised protein family UPF0070 YPN_1262 IPR002372 Pyrrolo-quinoline quinone repeat YPN_1262 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily YPN_1262 IPR015943 WD40/YVTN repeat-like-containing domain YPN_1262 IPR017687 Outer membrane protein assembly factor BamB YPN_1262 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPN_1263 IPR005225 Small GTP-binding protein domain YPN_1263 IPR006073 GTP binding domain YPN_1263 IPR015946 K homology domain-like, alpha/beta YPN_1263 IPR016484 GTP-binding protein EngA YPN_1263 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1263 IPR032859 YPN_1263 YPN_1264 IPR004776 Auxin efflux carrier YPN_1264 IPR038770 YPN_1264 YPN_1265 IPR010807 Protein of unknown function DUF1407 YPN_1265 IPR029037 YfgJ-like YPN_1266 IPR003753 Exonuclease VII, large subunit YPN_1266 IPR020579 Exonuclease VII, large subunit, C-terminal YPN_1266 IPR025824 OB-fold nucleic acid binding domain YPN_1267 IPR000644 CBS domain YPN_1267 IPR001093 IMP dehydrogenase/GMP reductase YPN_1267 IPR005990 Inosine-5'-monophosphate dehydrogenase YPN_1267 IPR013785 Aldolase-type TIM barrel YPN_1267 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPN_1268 IPR001674 GMP synthase, C-terminal YPN_1268 IPR004739 GMP synthase, N-terminal YPN_1268 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1268 IPR017926 Glutamine amidotransferase YPN_1268 IPR022310 NAD/GMP synthase YPN_1268 IPR022955 GMP synthase YPN_1268 IPR029062 Class I glutamine amidotransferase-like YPN_1269 IPR002686 Transposase IS200-like YPN_1269 IPR036515 YPN_1269 YPN_1270 IPR008514 Type VI secretion system effector, Hcp YPN_1270 IPR036624 YPN_1270 YPN_1271 IPR010665 Protein of unknown function DUF1240 YPN_1272 IPR010665 Protein of unknown function DUF1240 YPN_1273 IPR010665 Protein of unknown function DUF1240 YPN_1275 IPR001207 Transposase, mutator type YPN_1277 IPR010351 Protein of unknown function DUF943 YPN_1278 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YPN_1278 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPN_1278 IPR029056 Ribokinase-like YPN_1281 IPR014453 Inhibitor of vertebrate lysozyme YPN_1281 IPR036501 YPN_1281 YPN_1282 IPR001206 Diacylglycerol kinase, catalytic domain YPN_1282 IPR005218 Diacylglycerol/lipid kinase YPN_1282 IPR016064 ATP-NAD kinase-like domain YPN_1282 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 YPN_1282 IPR022433 Lipid kinase YegS YPN_1283 IPR001539 Peptidase U32 YPN_1283 IPR032525 YPN_1283 YPN_1284 IPR010879 Domain of unknown function DUF1508 YPN_1284 IPR036913 YPN_1284 YPN_1285 IPR001789 Signal transduction response regulator, receiver domain YPN_1285 IPR001867 Signal transduction response regulator, C-terminal YPN_1285 IPR011006 CheY-like superfamily YPN_1285 IPR036388 YPN_1285 YPN_1286 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1286 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1286 IPR036890 YPN_1286 YPN_1287 IPR003660 HAMP linker domain YPN_1287 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1287 IPR036097 YPN_1287 YPN_1287 IPR036890 YPN_1287 YPN_1288 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPN_1288 IPR011701 Major facilitator superfamily YPN_1288 IPR023721 Multidrug resistance protein MdtD, putative YPN_1288 IPR036259 YPN_1288 YPN_1289 IPR001036 Acriflavin resistance protein YPN_1289 IPR023931 Multidrug resistance protein MdtC YPN_1289 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPN_1290 IPR001036 Acriflavin resistance protein YPN_1290 IPR022831 Multidrug resistance protein MdtB YPN_1290 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPN_1291 IPR006143 RND efflux pump, membrane fusion protein YPN_1291 IPR022824 Multidrug resistance protein MdtA YPN_1291 IPR039562 YPN_1291 YPN_1292 IPR003439 ABC transporter-like YPN_1292 IPR003593 AAA+ ATPase domain YPN_1292 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPN_1292 IPR008995 Molybdate/tungstate binding, C-terminal YPN_1292 IPR013611 Transport-associated OB, type 2 YPN_1292 IPR017871 ABC transporter, conserved site YPN_1292 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1293 IPR000524 Transcription regulator HTH, GntR YPN_1293 IPR004839 Aminotransferase, class I/classII YPN_1293 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1293 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1293 IPR036388 YPN_1293 YPN_1293 IPR036390 YPN_1293 YPN_1294 IPR004632 4-aminobutyrate aminotransferase, bacterial YPN_1294 IPR005814 Aminotransferase class-III YPN_1294 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1294 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1294 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1295 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_1296 IPR000515 MetI-like domain YPN_1296 IPR035906 YPN_1296 YPN_1297 IPR000515 MetI-like domain YPN_1297 IPR035906 YPN_1297 YPN_1298 IPR013126 Heat shock protein 70 family YPN_1298 IPR018181 Heat shock protein 70, conserved site YPN_1299 IPR000644 CBS domain YPN_1299 IPR006667 SLC41 divalent cation transporters, integral membrane domain YPN_1299 IPR006668 Magnesium transporter, MgtE intracellular domain YPN_1299 IPR006669 Magnesium transporter MgtE YPN_1299 IPR036739 YPN_1299 YPN_1299 IPR038048 YPN_1299 YPN_1299 IPR038076 YPN_1299 YPN_1300 IPR003695 Ppx/GppA phosphatase YPN_1300 IPR022371 Exopolyphosphatase YPN_1300 IPR030673 YPN_1300 YPN_1301 IPR003414 Polyphosphate kinase YPN_1301 IPR024953 Polyphosphate kinase middle domain YPN_1301 IPR025198 Polyphosphate kinase N-terminal domain YPN_1301 IPR025200 Polyphosphate kinase C-terminal domain YPN_1301 IPR036830 YPN_1301 YPN_1301 IPR036832 YPN_1301 YPN_1302 IPR035906 YPN_1302 YPN_1303 IPR000515 MetI-like domain YPN_1303 IPR035906 YPN_1303 YPN_1304 IPR000515 MetI-like domain YPN_1304 IPR005672 Phosphate transport system permease protein PstA YPN_1304 IPR035906 YPN_1304 YPN_1305 IPR003439 ABC transporter-like YPN_1305 IPR003593 AAA+ ATPase domain YPN_1305 IPR005670 Phosphate transport system permease protein 1 YPN_1305 IPR017871 ABC transporter, conserved site YPN_1305 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1306 IPR005358 Putative zinc- or iron-chelating domain containing protein YPN_1307 IPR020193 Flagellin lysine-N-methylase, C-terminal YPN_1308 IPR000182 GNAT domain YPN_1308 IPR016181 Acyl-CoA N-acyltransferase YPN_1309 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPN_1309 IPR002376 Formyl transferase, N-terminal YPN_1309 IPR004607 Phosphoribosylglycinamide formyltransferase YPN_1309 IPR036477 YPN_1309 YPN_1310 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YPN_1310 IPR010918 AIR synthase-related protein, C-terminal domain YPN_1310 IPR016188 PurM, N-terminal-like YPN_1310 IPR036676 YPN_1310 YPN_1310 IPR036921 YPN_1310 YPN_1311 IPR005765 Uracil phosphoribosyl transferase YPN_1311 IPR029057 Phosphoribosyltransferase-like YPN_1311 IPR034332 YPN_1311 YPN_1312 IPR002686 Transposase IS200-like YPN_1312 IPR036515 YPN_1312 YPN_1313 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YPN_1313 IPR017788 DnaA regulatory inactivator Hda YPN_1313 IPR020591 Chromosomal replication control, initiator DnaA-like YPN_1313 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPN_1313 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1314 IPR006659 Arsenate reductase YPN_1314 IPR006660 Arsenate reductase-like YPN_1314 IPR036249 YPN_1314 YPN_1315 IPR001915 Peptidase M48 YPN_1315 IPR011716 Tetratricopeptide TPR-3 YPN_1315 IPR011990 Tetratricopeptide-like helical domain YPN_1315 IPR030873 YPN_1315 YPN_1316 IPR002549 Uncharacterised protein family UPF0118 YPN_1321 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPN_1321 IPR024706 Peroxiredoxin, AhpC-type YPN_1321 IPR036249 YPN_1321 YPN_1322 IPR016867 Glycine cleavage repressor GcvR YPN_1323 IPR002220 DapA-like YPN_1323 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YPN_1323 IPR013785 Aldolase-type TIM barrel YPN_1323 IPR020624 Dihydrodipicolinate synthetase, conserved site YPN_1323 IPR020625 Dihydrodipicolinate synthetase, active site YPN_1324 IPR010653 Lipoprotein, NlpB YPN_1324 IPR014524 Outer membrane protein assembly factor BamC YPN_1325 IPR002686 Transposase IS200-like YPN_1325 IPR036515 YPN_1325 YPN_1326 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YPN_1326 IPR018236 SAICAR synthetase, conserved site YPN_1326 IPR028923 SAICAR synthetase/ADE2, N-terminal YPN_1327 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPN_1328 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPN_1329 IPR000182 GNAT domain YPN_1329 IPR007807 Helicase domain YPN_1329 IPR013562 Domain of unknown function DUF1726 YPN_1329 IPR016181 Acyl-CoA N-acyltransferase YPN_1329 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPN_1329 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1329 IPR033442 YPN_1329 YPN_1329 IPR038321 YPN_1329 YPN_1330 IPR020910 Uncharacterised protein family UPF0370 YPN_1331 IPR003709 Peptidase M15B/M15C YPN_1331 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPN_1332 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPN_1332 IPR002933 Peptidase M20 YPN_1332 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YPN_1332 IPR011650 Peptidase M20, dimerisation domain YPN_1332 IPR036264 YPN_1332 YPN_1333 IPR006504 Transcriptional regulator Spx/MgsR YPN_1333 IPR006660 Arsenate reductase-like YPN_1333 IPR036249 YPN_1333 YPN_1334 IPR011990 Tetratricopeptide-like helical domain YPN_1335 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_1336 IPR000515 MetI-like domain YPN_1336 IPR035906 YPN_1336 YPN_1337 IPR003439 ABC transporter-like YPN_1337 IPR003593 AAA+ ATPase domain YPN_1337 IPR008995 Molybdate/tungstate binding, C-terminal YPN_1337 IPR017871 ABC transporter, conserved site YPN_1337 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1338 IPR000917 Sulfatase YPN_1338 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_1338 IPR017850 Alkaline-phosphatase-like, core domain YPN_1338 IPR024607 Sulfatase, conserved site YPN_1339 IPR007197 Radical SAM YPN_1339 IPR013785 Aldolase-type TIM barrel YPN_1339 IPR023885 4Fe4S-binding SPASM domain YPN_1340 IPR007404 Protein of unknown function DUF457 YPN_1342 IPR001036 Acriflavin resistance protein YPN_1342 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPN_1342 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPN_1343 IPR017162 Uncharacterised conserved protein UCP037266 YPN_1343 IPR036388 YPN_1343 YPN_1344 IPR000792 Transcription regulator LuxR, C-terminal YPN_1344 IPR001789 Signal transduction response regulator, receiver domain YPN_1344 IPR011006 CheY-like superfamily YPN_1344 IPR016032 Signal transduction response regulator, C-terminal effector YPN_1345 IPR004496 Ferredoxin-type protein NapF YPN_1345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_1345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1346 IPR005623 Chaperone NapD, nitrate reductase assembly YPN_1347 IPR006656 Molybdopterin oxidoreductase YPN_1347 IPR006657 Molydopterin dinucleotide-binding domain YPN_1347 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPN_1347 IPR009010 Aspartate decarboxylase-like domain YPN_1347 IPR010051 Periplasmic nitrate reductase, large subunit YPN_1347 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPN_1347 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPN_1348 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPN_1348 IPR036280 YPN_1348 YPN_1349 IPR005126 NapC/NirT cytochrome c, N-terminal YPN_1349 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YPN_1349 IPR024717 Denitrification system component NapC/NirT/NrfH YPN_1349 IPR036280 YPN_1349 YPN_1349 IPR038266 YPN_1349 YPN_1350 IPR000086 NUDIX hydrolase domain YPN_1350 IPR004385 Nucleoside diphosphate pyrophosphatase YPN_1350 IPR015797 NUDIX hydrolase domain-like YPN_1351 IPR002505 Phosphate acetyl/butaryl transferase YPN_1351 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase YPN_1351 IPR012301 Malic enzyme, N-terminal domain YPN_1351 IPR012302 Malic enzyme, NAD-binding YPN_1351 IPR015884 Malic enzyme, conserved site YPN_1351 IPR036291 YPN_1351 YPN_1351 IPR037062 YPN_1351 YPN_1352 IPR003791 Protein of unknown function UPF0178 YPN_1353 IPR001260 Coproporphyrinogen III oxidase, aerobic YPN_1353 IPR018375 Coproporphyrinogen III oxidase, conserved site YPN_1353 IPR036406 YPN_1353 YPN_1354 IPR000182 GNAT domain YPN_1354 IPR016181 Acyl-CoA N-acyltransferase YPN_1354 IPR023072 Acetyltransferase, YpeA YPN_1357 IPR003991 Pertactin virulence factor family YPN_1357 IPR004899 Pertactin, central region YPN_1357 IPR005546 Autotransporter beta-domain YPN_1357 IPR006315 Outer membrane autotransporter barrel YPN_1357 IPR011050 Pectin lyase fold/virulence factor YPN_1357 IPR012332 P22 tailspike C-terminal domain-like YPN_1357 IPR036709 YPN_1357 YPN_1358 IPR005220 Viral OB-fold, YgiW YPN_1358 IPR016052 Bacteriophage 933W, L0136 YPN_1358 IPR036700 YPN_1358 YPN_1359 IPR010938 Protein of unknown function DUF1131 YPN_1359 IPR038714 YPN_1359 YPN_1360 IPR006314 Dyp-type peroxidase YPN_1360 IPR011008 Dimeric alpha-beta barrel YPN_1361 IPR002220 DapA-like YPN_1361 IPR013785 Aldolase-type TIM barrel YPN_1361 IPR020624 Dihydrodipicolinate synthetase, conserved site YPN_1362 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YPN_1362 IPR011060 Ribulose-phosphate binding barrel YPN_1362 IPR013785 Aldolase-type TIM barrel YPN_1363 IPR001611 Leucine-rich repeat YPN_1363 IPR003591 Leucine-rich repeat, typical subtype YPN_1363 IPR032674 YPN_1363 YPN_1363 IPR032675 YPN_1363 YPN_1364 IPR000600 ROK YPN_1364 IPR023945 N-acetylmannosamine kinase, bacterial YPN_1365 IPR004375 Conserved hypothetical protein CHP00022 YPN_1365 IPR037012 YPN_1365 YPN_1366 IPR000281 Helix-turn-helix protein RpiR YPN_1366 IPR001347 Sugar isomerase (SIS) YPN_1366 IPR009057 Homeodomain-like YPN_1366 IPR036388 YPN_1366 YPN_1367 IPR004742 Sialic acid transporter YPN_1367 IPR011701 Major facilitator superfamily YPN_1367 IPR036259 YPN_1367 YPN_1368 IPR005669 Thiosulphate/Sulfate-binding protein YPN_1369 IPR000515 MetI-like domain YPN_1369 IPR005667 Sulphate ABC transporter permease protein 2 YPN_1369 IPR011865 Sulphate ABC transporter, permease protein CysT YPN_1369 IPR035906 YPN_1369 YPN_1370 IPR000515 MetI-like domain YPN_1370 IPR005667 Sulphate ABC transporter permease protein 2 YPN_1370 IPR011866 Sulphate ABC transporter, permease protein CysW YPN_1370 IPR035906 YPN_1370 YPN_1371 IPR003439 ABC transporter-like YPN_1371 IPR003593 AAA+ ATPase domain YPN_1371 IPR005666 Sulphate transport system permease protein 1 YPN_1371 IPR008995 Molybdate/tungstate binding, C-terminal YPN_1371 IPR017871 ABC transporter, conserved site YPN_1371 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1372 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPN_1372 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_1372 IPR005856 Cysteine synthase K/M YPN_1372 IPR005858 Cysteine synthase B YPN_1372 IPR036052 YPN_1372 YPN_1373 IPR032675 YPN_1373 YPN_1374 IPR001789 Signal transduction response regulator, receiver domain YPN_1374 IPR001867 Signal transduction response regulator, C-terminal YPN_1374 IPR011006 CheY-like superfamily YPN_1374 IPR016032 Signal transduction response regulator, C-terminal effector YPN_1374 IPR036388 YPN_1374 YPN_1375 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1375 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1375 IPR036097 YPN_1375 YPN_1375 IPR036890 YPN_1375 YPN_1376 IPR002035 von Willebrand factor, type A YPN_1376 IPR036465 YPN_1376 YPN_1377 IPR004839 Aminotransferase, class I/classII YPN_1377 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1377 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1377 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1377 IPR027619 Putative C-S lyase YPN_1378 IPR000587 Creatinase, N-terminal YPN_1378 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPN_1379 IPR000587 Creatinase, N-terminal YPN_1379 IPR000994 Peptidase M24, structural domain YPN_1379 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPN_1379 IPR036005 YPN_1379 YPN_1380 IPR038377 YPN_1380 YPN_1381 IPR001763 Rhodanese-like domain YPN_1381 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPN_1381 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPN_1381 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_1381 IPR036188 YPN_1381 YPN_1381 IPR036873 YPN_1381 YPN_1382 IPR003439 ABC transporter-like YPN_1382 IPR003593 AAA+ ATPase domain YPN_1382 IPR003838 Permease FtsX-like YPN_1382 IPR017871 ABC transporter, conserved site YPN_1382 IPR025857 MacB-like periplasmic core domain YPN_1382 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1383 IPR006143 RND efflux pump, membrane fusion protein YPN_1383 IPR032317 YPN_1383 YPN_1384 IPR001789 Signal transduction response regulator, receiver domain YPN_1384 IPR001867 Signal transduction response regulator, C-terminal YPN_1384 IPR011006 CheY-like superfamily YPN_1384 IPR016032 Signal transduction response regulator, C-terminal effector YPN_1384 IPR036388 YPN_1384 YPN_1385 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1385 IPR003660 HAMP linker domain YPN_1385 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1385 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1385 IPR036097 YPN_1385 YPN_1385 IPR036890 YPN_1385 YPN_1386 IPR002686 Transposase IS200-like YPN_1386 IPR036515 YPN_1386 YPN_1387 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPN_1387 IPR011055 Duplicated hybrid motif YPN_1388 IPR000121 PEP-utilising enzyme, C-terminal YPN_1388 IPR006318 Phosphoenolpyruvate-utilising enzyme YPN_1388 IPR008279 PEP-utilising enzyme, mobile domain YPN_1388 IPR008731 Phosphotransferase system, enzyme I N-terminal YPN_1388 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_1388 IPR018274 PEP-utilising enzyme, active site YPN_1388 IPR023151 PEP-utilising enzyme, conserved site YPN_1388 IPR024692 Phosphotransferase system, enzyme I YPN_1388 IPR036618 YPN_1388 YPN_1388 IPR036637 YPN_1388 YPN_1389 IPR000032 Phosphocarrier HPr protein-like YPN_1389 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPN_1389 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPN_1389 IPR035895 YPN_1389 YPN_1390 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPN_1390 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_1390 IPR005856 Cysteine synthase K/M YPN_1390 IPR005859 Cysteine synthase A YPN_1390 IPR036052 YPN_1390 YPN_1391 IPR022985 CysZ, gammaproteobacteria YPN_1392 IPR007449 ZipA, C-terminal FtsZ-binding domain YPN_1392 IPR011919 Cell division protein ZipA YPN_1392 IPR036765 YPN_1392 YPN_1393 IPR001357 BRCT domain YPN_1393 IPR001679 NAD-dependent DNA ligase YPN_1393 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPN_1393 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YPN_1393 IPR004150 NAD-dependent DNA ligase, OB-fold YPN_1393 IPR010994 RuvA domain 2-like YPN_1393 IPR012340 Nucleic acid-binding, OB-fold YPN_1393 IPR013839 NAD-dependent DNA ligase, adenylation YPN_1393 IPR013840 NAD-dependent DNA ligase, N-terminal YPN_1393 IPR018239 NAD-dependent DNA ligase, active site YPN_1393 IPR033136 YPN_1393 YPN_1393 IPR036420 YPN_1393 YPN_1394 IPR024530 Protein of unknown function DUF3820 YPN_1395 IPR025577 FlxA-like protein YPN_1396 IPR009267 Protein of unknown function DUF925 YPN_1397 IPR002686 Transposase IS200-like YPN_1397 IPR036515 YPN_1397 YPN_1398 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPN_1398 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_1398 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YPN_1398 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YPN_1398 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1398 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPN_1398 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YPN_1399 IPR002668 Concentrative nucleoside transporter N-terminal domain YPN_1399 IPR011642 Nucleoside recognition Gate YPN_1399 IPR011657 Concentrative nucleoside transporter C-terminal domain YPN_1400 IPR001046 NRAMP family YPN_1401 IPR019638 Protein of unknown function DUF2502 YPN_1402 IPR023210 NADP-dependent oxidoreductase domain YPN_1402 IPR036812 YPN_1402 YPN_1403 IPR000847 Transcription regulator HTH, LysR YPN_1403 IPR005119 LysR, substrate-binding YPN_1403 IPR036388 YPN_1403 YPN_1403 IPR036390 YPN_1403 YPN_1404 IPR007896 Transmembrane pair, bacterial YPN_1405 IPR003836 Glucokinase YPN_1406 IPR010856 Protein of unknown function DUF1479 YPN_1406 IPR027443 Isopenicillin N synthase-like YPN_1407 IPR004839 Aminotransferase, class I/classII YPN_1407 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1407 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1407 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1408 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPN_1408 IPR016174 Di-haem cytochrome, transmembrane YPN_1409 IPR031807 YPN_1409 YPN_1410 IPR005534 Curli production assembly/transport component CsgG YPN_1411 IPR014508 Uncharacterised conserved protein, TPR-like repeat YPN_1412 IPR008517 Protein of unknown function DUF799 YPN_1413 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_1413 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1414 IPR020945 DMSO/Nitrate reductase chaperone YPN_1414 IPR026269 Tat proofreading chaperone DmsD-type YPN_1414 IPR036411 YPN_1414 YPN_1415 IPR007059 DMSO reductase anchor subunit (DmsC) YPN_1416 IPR014297 Dimethylsulphoxide reductase, chain B YPN_1416 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_1416 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1417 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPN_1417 IPR006656 Molybdopterin oxidoreductase YPN_1417 IPR006657 Molydopterin dinucleotide-binding domain YPN_1417 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPN_1417 IPR009010 Aspartate decarboxylase-like domain YPN_1417 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPN_1417 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPN_1417 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPN_1418 IPR025320 Protein of unknown function DUF4225 YPN_1419 IPR008514 Type VI secretion system effector, Hcp YPN_1419 IPR036624 YPN_1419 YPN_1420 IPR014591 Uncharacterised conserved protein UCP034455 YPN_1420 IPR021125 Protein of unknown function DUF2127 YPN_1421 IPR003439 ABC transporter-like YPN_1421 IPR003593 AAA+ ATPase domain YPN_1421 IPR008995 Molybdate/tungstate binding, C-terminal YPN_1421 IPR017871 ABC transporter, conserved site YPN_1421 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1422 IPR000515 MetI-like domain YPN_1422 IPR035906 YPN_1422 YPN_1423 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPN_1423 IPR026045 Ferric binding protein YPN_1424 IPR011757 Lytic transglycosylase MltB YPN_1424 IPR023346 Lysozyme-like domain YPN_1424 IPR031304 YPN_1424 YPN_1425 IPR000792 Transcription regulator LuxR, C-terminal YPN_1425 IPR016032 Signal transduction response regulator, C-terminal effector YPN_1425 IPR036388 YPN_1425 YPN_1426 IPR014894 Protein DcrB YPN_1426 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPN_1427 IPR006664 Outer membrane protein, bacterial YPN_1427 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_1427 IPR036737 YPN_1427 YPN_1429 IPR021067 Glycosyltransferase, GlcNAc YPN_1429 IPR029044 Nucleotide-diphospho-sugar transferases YPN_1430 IPR000259 Fimbrial-type adhesion domain YPN_1430 IPR008966 Adhesion domain YPN_1430 IPR036937 YPN_1430 YPN_1431 IPR010657 ImpA, N-terminal YPN_1432 IPR010732 Protein of unknown function DUF1305 YPN_1433 IPR010272 Type VI secretion system, VCA0110 YPN_1434 IPR001270 ClpA/B family YPN_1434 IPR003593 AAA+ ATPase domain YPN_1434 IPR003959 ATPase, AAA-type, core YPN_1434 IPR004176 Clp, N-terminal YPN_1434 IPR017729 Type VI secretion system, ATPase ClpV1 YPN_1434 IPR018368 ClpA/B, conserved site 1 YPN_1434 IPR019489 Clp ATPase, C-terminal YPN_1434 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1434 IPR028299 ClpA/B, conserved site 2 YPN_1434 IPR036628 YPN_1434 YPN_1435 IPR008966 Adhesion domain YPN_1435 IPR036937 YPN_1435 YPN_1435 IPR039458 YPN_1435 YPN_1436 IPR001829 Pili assembly chaperone, bacterial YPN_1436 IPR008962 PapD-like YPN_1436 IPR013783 Immunoglobulin-like fold YPN_1436 IPR016147 PapD, N-terminal, bacterial YPN_1436 IPR016148 Pili assembly chaperone, C-terminal domain YPN_1436 IPR018046 Pili assembly chaperone, conserved site YPN_1436 IPR036316 YPN_1436 YPN_1437 IPR000015 Outer membrane usher protein YPN_1437 IPR025885 PapC, N-terminal domain YPN_1437 IPR037224 YPN_1437 YPN_1438 IPR001207 Transposase, mutator type YPN_1439 IPR001207 Transposase, mutator type YPN_1440 IPR000015 Outer membrane usher protein YPN_1440 IPR025949 PapC-like, C-terminal domain YPN_1441 IPR000259 Fimbrial-type adhesion domain YPN_1441 IPR008966 Adhesion domain YPN_1441 IPR036937 YPN_1441 YPN_1442 IPR008312 Uncharacterised conserved protein UCP028301 YPN_1443 IPR010269 Protein of unknown function DUF877 YPN_1444 IPR008514 Type VI secretion system effector, Hcp YPN_1444 IPR036624 YPN_1444 YPN_1445 IPR017734 Type VI secretion system, lipoprotein SciN YPN_1445 IPR038706 YPN_1445 YPN_1446 IPR010263 Protein of unknown function DUF876 YPN_1447 IPR017732 Type IV / VI secretion system, DotU YPN_1447 IPR038522 YPN_1447 YPN_1448 IPR001584 Integrase, catalytic core YPN_1448 IPR006120 Resolvase, HTH domain YPN_1448 IPR009057 Homeodomain-like YPN_1448 IPR012337 Ribonuclease H-like domain YPN_1449 IPR001270 ClpA/B family YPN_1449 IPR002611 IstB-like ATP-binding protein YPN_1449 IPR003593 AAA+ ATPase domain YPN_1449 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1449 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_1450 IPR001702 Porin, Gram-negative type YPN_1450 IPR023614 Porin domain YPN_1451 IPR007709 N-formylglutamate amidohydrolase YPN_1451 IPR010247 N-formylglutamate deformylase YPN_1452 IPR005920 Imidazolonepropionase YPN_1452 IPR006680 Amidohydrolase 1 YPN_1452 IPR011059 Metal-dependent hydrolase, composite domain YPN_1452 IPR032466 YPN_1452 YPN_1453 IPR000524 Transcription regulator HTH, GntR YPN_1453 IPR010248 Histidine utilization repressor YPN_1453 IPR011663 UbiC transcription regulator-associated YPN_1453 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPN_1453 IPR036388 YPN_1453 YPN_1453 IPR036390 YPN_1453 YPN_1454 IPR006680 Amidohydrolase 1 YPN_1454 IPR010252 Formiminoglutamate deiminase YPN_1454 IPR011059 Metal-dependent hydrolase, composite domain YPN_1454 IPR032466 YPN_1454 YPN_1455 IPR010282 Uncharacterised protein family HutD/Ves YPN_1455 IPR011051 RmlC-like cupin domain YPN_1455 IPR014710 RmlC-like jelly roll fold YPN_1456 IPR005801 ADC synthase YPN_1456 IPR015890 Chorismate binding, C-terminal YPN_1457 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPN_1457 IPR016039 Thiolase-like YPN_1458 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YPN_1458 IPR016039 Thiolase-like YPN_1459 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_1459 IPR036291 YPN_1459 YPN_1460 IPR001279 Beta-lactamase-like YPN_1460 IPR036866 YPN_1460 YPN_1461 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related YPN_1462 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_1462 IPR036291 YPN_1462 YPN_1463 IPR025993 Ceramide glucosyltransferase YPN_1463 IPR029044 Nucleotide-diphospho-sugar transferases YPN_1465 IPR007235 Glycosyl transferase, family 28, C-terminal YPN_1468 IPR001207 Transposase, mutator type YPN_1469 IPR006597 Sel1-like YPN_1469 IPR011652 MORN variant YPN_1469 IPR011990 Tetratricopeptide-like helical domain YPN_1470 IPR006597 Sel1-like YPN_1470 IPR025115 Domain of unknown function DUF4034 YPN_1471 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPN_1471 IPR022133 Ribose-5-phosphate isomerase, C-terminal YPN_1471 IPR036569 YPN_1471 YPN_1472 IPR013217 Methyltransferase type 12 YPN_1472 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted YPN_1472 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1473 IPR002347 Glucose/ribitol dehydrogenase YPN_1473 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_1473 IPR036291 YPN_1473 YPN_1474 IPR011051 RmlC-like cupin domain YPN_1475 IPR011051 RmlC-like cupin domain YPN_1476 IPR011989 Armadillo-like helical YPN_1476 IPR016024 Armadillo-type fold YPN_1477 IPR000073 Alpha/beta hydrolase fold-1 YPN_1477 IPR029058 Alpha/Beta hydrolase fold YPN_1478 IPR011051 RmlC-like cupin domain YPN_1478 IPR013096 Cupin 2, conserved barrel YPN_1478 IPR014710 RmlC-like jelly roll fold YPN_1479 IPR003779 Carboxymuconolactone decarboxylase-like YPN_1479 IPR029032 AhpD-like YPN_1480 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1480 IPR003660 HAMP linker domain YPN_1480 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1480 IPR006290 Heavy metal sensor kinase YPN_1480 IPR036097 YPN_1480 YPN_1480 IPR036890 YPN_1480 YPN_1481 IPR001789 Signal transduction response regulator, receiver domain YPN_1481 IPR001867 Signal transduction response regulator, C-terminal YPN_1481 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YPN_1481 IPR011006 CheY-like superfamily YPN_1481 IPR016032 Signal transduction response regulator, C-terminal effector YPN_1481 IPR036388 YPN_1481 YPN_1482 IPR002925 Dienelactone hydrolase YPN_1482 IPR029058 Alpha/Beta hydrolase fold YPN_1483 IPR008254 Flavodoxin/nitric oxide synthase YPN_1483 IPR029039 Flavoprotein-like YPN_1484 IPR016174 Di-haem cytochrome, transmembrane YPN_1484 IPR025517 Domain of unknown function DUF4405 YPN_1485 IPR025145 Protein of unknown function DUF4087 YPN_1486 IPR028082 Periplasmic binding protein-like I YPN_1487 IPR013094 Alpha/beta hydrolase fold-3 YPN_1487 IPR029058 Alpha/Beta hydrolase fold YPN_1488 IPR001763 Rhodanese-like domain YPN_1488 IPR036873 YPN_1488 YPN_1489 IPR001584 Integrase, catalytic core YPN_1489 IPR012337 Ribonuclease H-like domain YPN_1489 IPR036397 YPN_1489 YPN_1490 IPR009057 Homeodomain-like YPN_1491 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YPN_1491 IPR006073 GTP binding domain YPN_1491 IPR012675 Beta-grasp domain YPN_1491 IPR012676 TGS-like YPN_1491 IPR013029 Domain of unknown function DUF933 YPN_1491 IPR023192 TGS-like domain YPN_1491 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1492 IPR001328 Peptidyl-tRNA hydrolase YPN_1492 IPR018171 Peptidyl-tRNA hydrolase, conserved site YPN_1492 IPR036416 YPN_1492 YPN_1493 IPR019698 Protein of unknown function DUF2583 YPN_1494 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YPN_1494 IPR005946 Ribose-phosphate diphosphokinase YPN_1494 IPR029057 Phosphoribosyltransferase-like YPN_1494 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YPN_1494 IPR037515 YPN_1494 YPN_1496 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YPN_1496 IPR006204 GHMP kinase N-terminal domain YPN_1496 IPR013750 GHMP kinase, C-terminal domain YPN_1496 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_1496 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_1496 IPR036554 YPN_1496 YPN_1497 IPR004565 Outer membrane lipoprotein LolB YPN_1497 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPN_1498 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YPN_1498 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPN_1498 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YPN_1498 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YPN_1498 IPR018214 Glutamyl-tRNA reductase, conserved site YPN_1498 IPR036291 YPN_1498 YPN_1498 IPR036343 YPN_1498 YPN_1498 IPR036453 YPN_1498 YPN_1499 IPR000352 Peptide chain release factor class I/class II YPN_1499 IPR004373 Peptide chain release factor 1 YPN_1499 IPR005139 Peptide chain release factor YPN_1500 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_1500 IPR004556 Modification methylase HemK YPN_1500 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YPN_1500 IPR025714 Methyltransferase domain YPN_1500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1501 IPR007360 Invasion gene expression up-regulator, SirB YPN_1502 IPR011990 Tetratricopeptide-like helical domain YPN_1502 IPR032698 YPN_1502 YPN_1503 IPR006218 DAHP synthetase I/KDSA YPN_1503 IPR006269 3-deoxy-8-phosphooctulonate synthase YPN_1503 IPR013785 Aldolase-type TIM barrel YPN_1504 IPR001902 Sulphate anion transporter YPN_1504 IPR002645 STAS domain YPN_1504 IPR011547 Sulphate transporter YPN_1504 IPR018045 Sulphate anion transporter, conserved site YPN_1504 IPR036513 YPN_1504 YPN_1505 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPN_1505 IPR030395 YPN_1505 YPN_1506 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_1507 IPR000515 MetI-like domain YPN_1507 IPR035906 YPN_1507 YPN_1508 IPR000515 MetI-like domain YPN_1508 IPR035906 YPN_1508 YPN_1509 IPR003439 ABC transporter-like YPN_1509 IPR017871 ABC transporter, conserved site YPN_1509 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1510 IPR002686 Transposase IS200-like YPN_1510 IPR036515 YPN_1510 YPN_1511 IPR003439 ABC transporter-like YPN_1511 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1512 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPN_1512 IPR030395 YPN_1512 YPN_1513 IPR000600 ROK YPN_1513 IPR036388 YPN_1513 YPN_1513 IPR036390 YPN_1513 YPN_1514 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPN_1514 IPR004013 PHP, C-terminal YPN_1514 IPR016195 Polymerase/histidinol phosphatase-like YPN_1514 IPR023710 Probable phosphatase YcdX YPN_1515 IPR020945 DMSO/Nitrate reductase chaperone YPN_1515 IPR026269 Tat proofreading chaperone DmsD-type YPN_1515 IPR036411 YPN_1515 YPN_1516 IPR010835 Protein of unknown function DUF1439 YPN_1517 IPR011701 Major facilitator superfamily YPN_1517 IPR022855 Multidrug resistance protein MdtH YPN_1517 IPR036259 YPN_1517 YPN_1518 IPR000182 GNAT domain YPN_1518 IPR016181 Acyl-CoA N-acyltransferase YPN_1519 IPR000683 Oxidoreductase, N-terminal YPN_1519 IPR007432 Protein of unknown function DUF480 YPN_1519 IPR036291 YPN_1519 YPN_1519 IPR036388 YPN_1519 YPN_1519 IPR036390 YPN_1519 YPN_1520 IPR004268 Flagellin assembly, membrane protein MviN YPN_1521 IPR005565 Haemolysin activator HlyB YPN_1521 IPR013686 Polypeptide-transport-associated, ShlB-type YPN_1521 IPR027282 Two partner secretion pathway transporter YPN_1521 IPR035251 YPN_1521 YPN_1522 IPR008638 Filamentous haemagglutinin, N-terminal YPN_1522 IPR011050 Pectin lyase fold/virulence factor YPN_1522 IPR012334 Pectin lyase fold YPN_1522 IPR025157 Haemagluttinin repeat YPN_1523 IPR001278 Arginine-tRNA ligase YPN_1523 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_1523 IPR005148 Arginyl tRNA synthetase N-terminal domain YPN_1523 IPR008909 DALR anticodon binding YPN_1523 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPN_1523 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1523 IPR035684 YPN_1523 YPN_1523 IPR036695 YPN_1523 YPN_1524 IPR010393 Protein of unknown function DUF991 YPN_1524 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPN_1525 IPR005627 Copper homeostasis protein CutC YPN_1525 IPR023648 Copper homeostasis CutC domain YPN_1525 IPR036822 YPN_1525 YPN_1526 IPR010017 tRNA (mo5U34)-methyltransferase YPN_1526 IPR027555 tRNA (mo5U34)-methyltransferase-like YPN_1526 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1527 IPR005271 tRNA (cmo5U34)-methyltransferase YPN_1527 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1528 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPN_1528 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain YPN_1529 IPR002763 Protein of unknown function DUF72 YPN_1529 IPR036520 YPN_1529 YPN_1530 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPN_1530 IPR004115 GAD-like domain YPN_1530 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPN_1530 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPN_1530 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type YPN_1530 IPR012340 Nucleic acid-binding, OB-fold YPN_1530 IPR029351 GAD domain YPN_1531 IPR000086 NUDIX hydrolase domain YPN_1531 IPR003564 dATP pyrophosphohydrolase YPN_1531 IPR015797 NUDIX hydrolase domain-like YPN_1531 IPR020084 NUDIX hydrolase, conserved site YPN_1532 IPR002876 Transcriptional regulator TACO1-like YPN_1532 IPR017856 Integrase, N-terminal zinc-binding domain-like YPN_1532 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPN_1532 IPR029072 YebC-like YPN_1533 IPR002176 Crossover junction endodeoxyribonuclease RuvC YPN_1533 IPR012337 Ribonuclease H-like domain YPN_1533 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YPN_1533 IPR036397 YPN_1533 YPN_1534 IPR000085 Bacterial DNA recombination protein RuvA YPN_1534 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPN_1534 IPR010994 RuvA domain 2-like YPN_1534 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal YPN_1534 IPR012340 Nucleic acid-binding, OB-fold YPN_1534 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YPN_1534 IPR036267 YPN_1534 YPN_1535 IPR003593 AAA+ ATPase domain YPN_1535 IPR004605 DNA helicase, Holliday junction RuvB type YPN_1535 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal YPN_1535 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal YPN_1535 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1535 IPR036388 YPN_1535 YPN_1535 IPR036390 YPN_1535 YPN_1536 IPR001626 ABC-3 YPN_1536 IPR037294 YPN_1536 YPN_1537 IPR003439 ABC transporter-like YPN_1537 IPR003593 AAA+ ATPase domain YPN_1537 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1538 IPR006127 Periplasmic solute binding protein family YPN_1539 IPR007340 Opacity-associated protein A YPN_1539 IPR011055 Duplicated hybrid motif YPN_1539 IPR013731 Opacity-associated protein A, N-terminal YPN_1539 IPR016047 Peptidase M23 YPN_1539 IPR018392 LysM domain YPN_1540 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPN_1540 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YPN_1541 IPR001697 Pyruvate kinase YPN_1541 IPR011037 Pyruvate kinase-like, insert domain YPN_1541 IPR015793 Pyruvate kinase, barrel YPN_1541 IPR015795 Pyruvate kinase, C-terminal YPN_1541 IPR015806 Pyruvate kinase, beta-barrel insert domain YPN_1541 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_1541 IPR018209 Pyruvate kinase, active site YPN_1541 IPR036918 YPN_1541 YPN_1542 IPR000281 Helix-turn-helix protein RpiR YPN_1542 IPR001347 Sugar isomerase (SIS) YPN_1542 IPR009057 Homeodomain-like YPN_1542 IPR036388 YPN_1542 YPN_1543 IPR001282 Glucose-6-phosphate dehydrogenase YPN_1543 IPR019796 Glucose-6-phosphate dehydrogenase, active site YPN_1543 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YPN_1543 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YPN_1543 IPR036291 YPN_1543 YPN_1544 IPR000887 KDPG/KHG aldolase YPN_1544 IPR013785 Aldolase-type TIM barrel YPN_1544 IPR031337 YPN_1544 YPN_1544 IPR031338 YPN_1544 YPN_1545 IPR000390 Small multidrug resistance protein family YPN_1545 IPR023740 Spermidine export protein MdtJ YPN_1546 IPR000390 Small multidrug resistance protein family YPN_1546 IPR023737 Spermidine export protein MdtI YPN_1547 IPR006175 YjgF/Yer057p/UK114 family YPN_1547 IPR019897 YjgF-like protein, conserved site YPN_1547 IPR035959 YPN_1547 YPN_1548 IPR006555 ATP-dependent helicase, C-terminal YPN_1548 IPR010614 DEAD2 YPN_1548 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_1548 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1549 IPR000905 Gcp-like domain YPN_1549 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ YPN_1550 IPR004658 Outer membrane lipoprotein Slp YPN_1551 IPR000873 AMP-dependent synthetase/ligase YPN_1551 IPR020845 AMP-binding, conserved site YPN_1551 IPR025110 AMP-binding enzyme C-terminal domain YPN_1552 IPR002121 HRDC domain YPN_1552 IPR002562 3'-5' exonuclease domain YPN_1552 IPR006292 Ribonuclease D YPN_1552 IPR010997 HRDC-like YPN_1552 IPR012337 Ribonuclease H-like domain YPN_1552 IPR036397 YPN_1552 YPN_1553 IPR005527 Septum formation topological specificity factor MinE YPN_1553 IPR036707 YPN_1553 YPN_1554 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPN_1554 IPR010223 ATP binding protein MinD, bacterial-type YPN_1554 IPR025501 ATP binding protein MinD YPN_1554 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1555 IPR005526 Septum formation inhibitor MinC, C-terminal YPN_1555 IPR007874 Septum formation inhibitor MinC, N-terminal YPN_1555 IPR013033 Septum formation inhibitor MinC YPN_1555 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YPN_1555 IPR036145 YPN_1555 YPN_1555 IPR038061 YPN_1555 YPN_1556 IPR027354 YcgL domain YPN_1556 IPR038068 YPN_1556 YPN_1557 IPR011970 Lytic murein transglycosylase YPN_1557 IPR023346 Lysozyme-like domain YPN_1557 IPR031304 YPN_1557 YPN_1558 IPR011234 Fumarylacetoacetase, C-terminal-related YPN_1558 IPR036663 YPN_1558 YPN_1559 IPR005358 Putative zinc- or iron-chelating domain containing protein YPN_1559 IPR008228 Uncharacterised conserved protein UCP006173 YPN_1560 IPR002104 Integrase, catalytic YPN_1560 IPR010998 Integrase, Lambda-type, N-terminal YPN_1560 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_1560 IPR013762 Integrase-like, catalytic core YPN_1560 IPR022000 Domain of unknown function (DUF3596) YPN_1561 IPR001584 Integrase, catalytic core YPN_1561 IPR006120 Resolvase, HTH domain YPN_1561 IPR009057 Homeodomain-like YPN_1561 IPR012337 Ribonuclease H-like domain YPN_1562 IPR001270 ClpA/B family YPN_1562 IPR002611 IstB-like ATP-binding protein YPN_1562 IPR003593 AAA+ ATPase domain YPN_1562 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1562 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_1563 IPR023095 Adenine-specific methyltransferase, domain 2 YPN_1563 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1564 IPR008711 Recombinase NinB YPN_1564 IPR036619 YPN_1564 YPN_1565 IPR008713 Bacteriophage lambda NinG YPN_1566 IPR010534 Bacteriophage 933W, GpQ YPN_1567 IPR003497 BRO N-terminal domain YPN_1570 IPR002196 Glycoside hydrolase, family 24 YPN_1570 IPR023346 Lysozyme-like domain YPN_1571 IPR004929 Bacteriophage Rz lysis protein YPN_1572 IPR005039 Antirepressor protein, C-terminal YPN_1574 IPR018738 Protein of unknown function DUF2280 YPN_1576 IPR001207 Transposase, mutator type YPN_1579 IPR025129 Domain of unknown function DUF4055 YPN_1580 IPR017029 Putative phage head morphogenesis protein YPN_1582 IPR003343 Bacterial Ig-like, group 2 YPN_1582 IPR008964 Invasin/intimin cell-adhesion YPN_1587 IPR025395 Protein of unknown function DUF4128 YPN_1588 IPR003343 Bacterial Ig-like, group 2 YPN_1588 IPR008964 Invasin/intimin cell-adhesion YPN_1588 IPR014918 Bacteriophage T1, Orf41 YPN_1589 IPR014859 Protein of unknown function DUF1789 YPN_1590 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YPN_1590 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal YPN_1591 IPR010265 Bacteriophage lambda, GpM, minor tail YPN_1592 IPR002686 Transposase IS200-like YPN_1592 IPR036515 YPN_1592 YPN_1593 IPR006487 Bacteriophage lambda, GpL, minor tail YPN_1594 IPR000064 Endopeptidase, NLPC/P60 domain YPN_1594 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain YPN_1594 IPR028090 JAB domain, prokaryotic YPN_1594 IPR038765 YPN_1594 YPN_1596 IPR005569 Arc-like DNA binding YPN_1596 IPR010985 Ribbon-helix-helix YPN_1596 IPR013321 Arc-type ribbon-helix-helix YPN_1597 IPR003497 BRO N-terminal domain YPN_1599 IPR010654 Bacteriophage lambda tail assembly I YPN_1600 IPR003961 Fibronectin, type III YPN_1600 IPR013783 Immunoglobulin-like fold YPN_1600 IPR015406 Domain of unknown function DUF1983 YPN_1600 IPR032876 YPN_1600 YPN_1600 IPR036116 YPN_1600 YPN_1603 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPN_1605 IPR001207 Transposase, mutator type YPN_1606 IPR011701 Major facilitator superfamily YPN_1606 IPR036259 YPN_1606 YPN_1607 IPR000192 Aminotransferase class V domain YPN_1607 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1607 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1607 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1607 IPR016454 Cysteine desulfurase, NifS YPN_1610 IPR003752 Disulphide bond formation protein DsbB/BdbC YPN_1610 IPR022920 Disulphide bond formation protein DsbB YPN_1610 IPR023380 Disulphide bond formation protein DsbB-like domain YPN_1611 IPR004671 Na+/H+ antiporter NhaB YPN_1612 IPR000524 Transcription regulator HTH, GntR YPN_1612 IPR008920 Transcription regulator FadR/GntR, C-terminal YPN_1612 IPR014178 Fatty acid response transcription factor FadR YPN_1612 IPR028374 FadR, C-terminal domain YPN_1612 IPR036388 YPN_1612 YPN_1612 IPR036390 YPN_1612 YPN_1613 IPR007390 Sporulation stage V, protein R YPN_1614 IPR006076 FAD dependent oxidoreductase YPN_1614 IPR023080 D-amino acid dehydrogenase small subunit, DadA YPN_1614 IPR036188 YPN_1614 YPN_1615 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG YPN_1615 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPN_1615 IPR005829 Sugar transporter, conserved site YPN_1615 IPR011701 Major facilitator superfamily YPN_1615 IPR036259 YPN_1615 YPN_1616 IPR003829 Pirin, N-terminal domain YPN_1616 IPR008778 Pirin, C-terminal domain YPN_1616 IPR011051 RmlC-like cupin domain YPN_1616 IPR012093 Pirin YPN_1616 IPR014710 RmlC-like jelly roll fold YPN_1617 IPR000847 Transcription regulator HTH, LysR YPN_1617 IPR005119 LysR, substrate-binding YPN_1617 IPR036388 YPN_1617 YPN_1617 IPR036390 YPN_1617 YPN_1618 IPR000620 Drug/metabolite transporter YPN_1619 IPR006698 Thermus phage phiYS40, Orf56 YPN_1620 IPR010650 PrkA C-terminal domain YPN_1620 IPR013153 PrkA AAA domain YPN_1620 IPR016230 Serine-protein kinase, PrkA YPN_1620 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1621 IPR010583 MltA-interacting MipA YPN_1622 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPN_1622 IPR011013 Galactose mutarotase-like domain YPN_1622 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPN_1622 IPR025532 Glucose-6-phosphate 1-epimerase YPN_1623 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YPN_1623 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPN_1623 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPN_1623 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPN_1623 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPN_1623 IPR036291 YPN_1623 YPN_1624 IPR002579 Peptide methionine sulphoxide reductase MrsB YPN_1624 IPR011057 Mss4-like YPN_1625 IPR009749 Protein of unknown function DUF1315 YPN_1626 IPR000868 Isochorismatase-like YPN_1626 IPR036380 YPN_1626 YPN_1627 IPR006033 L-asparaginase, type I YPN_1627 IPR006034 Asparaginase/glutaminase YPN_1627 IPR020827 Asparaginase/glutaminase, active site 1 YPN_1627 IPR027473 L-asparaginase, C-terminal domain YPN_1627 IPR027474 L-asparaginase, N-terminal YPN_1627 IPR027475 Asparaginase/glutaminase, active site 2 YPN_1627 IPR036152 YPN_1627 YPN_1627 IPR037152 YPN_1627 YPN_1628 IPR002142 Peptidase S49 YPN_1628 IPR004634 Peptidase S49, protease IV YPN_1628 IPR004635 Peptidase S49, SppA YPN_1628 IPR029045 ClpP/crotonase-like domain YPN_1629 IPR000415 Nitroreductase-like YPN_1629 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YPN_1629 IPR029479 Nitroreductase YPN_1630 IPR004536 Selenide water dikinase YPN_1630 IPR010918 AIR synthase-related protein, C-terminal domain YPN_1630 IPR016188 PurM, N-terminal-like YPN_1630 IPR023061 Selenide, water dikinase, class I YPN_1630 IPR036676 YPN_1630 YPN_1630 IPR036921 YPN_1630 YPN_1631 IPR003601 DNA topoisomerase, type IA, domain 2 YPN_1631 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPN_1631 IPR005738 DNA topoisomerase III YPN_1631 IPR006171 Toprim domain YPN_1631 IPR013497 DNA topoisomerase, type IA, central YPN_1631 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPN_1631 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPN_1631 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPN_1631 IPR023405 DNA topoisomerase, type IA, core domain YPN_1631 IPR023406 DNA topoisomerase, type IA, active site YPN_1632 IPR009971 Protein of unknown function DUF1496 YPN_1633 IPR000086 NUDIX hydrolase domain YPN_1633 IPR015797 NUDIX hydrolase domain-like YPN_1633 IPR020084 NUDIX hydrolase, conserved site YPN_1633 IPR020476 NUDIX hydrolase YPN_1634 IPR004808 AP endonuclease 1 YPN_1634 IPR005135 Endonuclease/exonuclease/phosphatase YPN_1634 IPR020847 AP endonuclease 1, binding site YPN_1634 IPR020848 AP endonuclease 1, conserved site YPN_1634 IPR036691 YPN_1634 YPN_1635 IPR000847 Transcription regulator HTH, LysR YPN_1635 IPR036388 YPN_1635 YPN_1635 IPR036390 YPN_1635 YPN_1637 IPR001207 Transposase, mutator type YPN_1638 IPR002376 Formyl transferase, N-terminal YPN_1638 IPR002912 ACT domain YPN_1638 IPR004810 Formyltetrahydrofolate deformylase YPN_1638 IPR036477 YPN_1638 YPN_1639 IPR004027 SEC-C motif YPN_1639 IPR023006 Uncharacterised protein family UPF0225 YPN_1639 IPR032710 YPN_1639 YPN_1640 IPR001789 Signal transduction response regulator, receiver domain YPN_1640 IPR011006 CheY-like superfamily YPN_1640 IPR028616 Regulator of RpoS YPN_1640 IPR036457 YPN_1640 YPN_1641 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPN_1641 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_1641 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPN_1641 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPN_1641 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPN_1641 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YPN_1641 IPR036220 YPN_1641 YPN_1641 IPR036291 YPN_1641 YPN_1642 IPR001801 Histone-like protein H-NS YPN_1642 IPR027444 Histone-like protein H-NS, C-terminal domain YPN_1642 IPR027454 Histone-like protein H-NS family, oligomerisation domain YPN_1642 IPR037150 YPN_1642 YPN_1643 IPR001267 Thymidine kinase YPN_1643 IPR020633 Thymidine kinase, conserved site YPN_1643 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1644 IPR001270 ClpA/B family YPN_1644 IPR002611 IstB-like ATP-binding protein YPN_1644 IPR003593 AAA+ ATPase domain YPN_1644 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1644 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_1645 IPR001584 Integrase, catalytic core YPN_1645 IPR006120 Resolvase, HTH domain YPN_1645 IPR009057 Homeodomain-like YPN_1645 IPR012337 Ribonuclease H-like domain YPN_1646 IPR001670 Alcohol dehydrogenase, iron-type YPN_1646 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPN_1646 IPR015590 Aldehyde dehydrogenase domain YPN_1646 IPR016161 Aldehyde/histidinol dehydrogenase YPN_1646 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_1646 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_1646 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPN_1647 IPR002771 Multiple antibiotic resistance (MarC)-related YPN_1648 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_1648 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPN_1648 IPR030678 YPN_1648 YPN_1649 IPR000515 MetI-like domain YPN_1649 IPR035906 YPN_1649 YPN_1650 IPR000515 MetI-like domain YPN_1650 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPN_1650 IPR035906 YPN_1650 YPN_1651 IPR003439 ABC transporter-like YPN_1651 IPR003593 AAA+ ATPase domain YPN_1651 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPN_1651 IPR017871 ABC transporter, conserved site YPN_1651 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1652 IPR003439 ABC transporter-like YPN_1652 IPR003593 AAA+ ATPase domain YPN_1652 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPN_1652 IPR017871 ABC transporter, conserved site YPN_1652 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1654 IPR007376 dsDNA mimic, putative YPN_1654 IPR036763 YPN_1654 YPN_1655 IPR001736 Phospholipase D/Transphosphatidylase YPN_1655 IPR022924 Cardiolipin synthase YPN_1655 IPR025202 Phospholipase D-like domain YPN_1655 IPR027379 Cardiolipin synthase N-terminal YPN_1655 IPR030840 YPN_1655 YPN_1656 IPR000758 Virulence-related outer membrane protein YPN_1656 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_1656 IPR027385 Outer membrane protein beta-barrel YPN_1659 IPR027392 Transcription factor zinc-finger YPN_1660 IPR005545 YCII-related YPN_1660 IPR011008 Dimeric alpha-beta barrel YPN_1661 IPR003538 Gram-negative bacterial TonB protein YPN_1661 IPR006260 TonB, C-terminal YPN_1661 IPR037682 YPN_1661 YPN_1662 IPR001207 Transposase, mutator type YPN_1663 IPR006683 Thioesterase superfamily YPN_1663 IPR029069 HotDog domain YPN_1664 IPR006008 Intracellular septation protein A YPN_1665 IPR011547 Sulphate transporter YPN_1666 IPR002645 STAS domain YPN_1666 IPR036513 YPN_1666 YPN_1667 IPR009627 Uncharacterised protein family UPF0259 YPN_1669 IPR000758 Virulence-related outer membrane protein YPN_1669 IPR005618 Outer membrane protein, OmpW YPN_1669 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_1670 IPR007055 BON domain YPN_1670 IPR014004 Transport-associated and nodulation domain, bacteria YPN_1672 IPR002028 Tryptophan synthase, alpha chain YPN_1672 IPR011060 Ribulose-phosphate binding barrel YPN_1672 IPR013785 Aldolase-type TIM barrel YPN_1672 IPR018204 Tryptophan synthase, alpha chain, active site YPN_1673 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_1673 IPR006653 Tryptophan synthase, beta chain, conserved site YPN_1673 IPR006654 Tryptophan synthase, beta chain YPN_1673 IPR023026 Tryptophan synthase beta chain/beta chain-like YPN_1673 IPR036052 YPN_1673 YPN_1674 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain YPN_1674 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YPN_1674 IPR011060 Ribulose-phosphate binding barrel YPN_1674 IPR013785 Aldolase-type TIM barrel YPN_1674 IPR013798 Indole-3-glycerol phosphate synthase YPN_1675 IPR000312 Glycosyl transferase, family 3 YPN_1675 IPR005940 Anthranilate phosphoribosyl transferase YPN_1675 IPR017459 Glycosyl transferase family 3, N-terminal domain YPN_1675 IPR035902 YPN_1675 YPN_1675 IPR036320 YPN_1675 YPN_1676 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPN_1676 IPR017926 Glutamine amidotransferase YPN_1676 IPR029062 Class I glutamine amidotransferase-like YPN_1677 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YPN_1677 IPR005801 ADC synthase YPN_1677 IPR006805 Anthranilate synthase component I, N-terminal YPN_1677 IPR015890 Chorismate binding, C-terminal YPN_1677 IPR019999 Anthranilate synthase component I - like YPN_1678 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPN_1678 IPR004013 PHP, C-terminal YPN_1678 IPR016195 Polymerase/histidinol phosphatase-like YPN_1679 IPR006070 YrdC-like domain YPN_1679 IPR017945 DHBP synthase RibB-like alpha/beta domain YPN_1680 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPN_1680 IPR002942 RNA-binding S4 domain YPN_1680 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPN_1680 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPN_1680 IPR020103 Pseudouridine synthase, catalytic domain YPN_1680 IPR036986 YPN_1680 YPN_1681 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YPN_1681 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain YPN_1681 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1682 IPR002347 Glucose/ribitol dehydrogenase YPN_1682 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_1682 IPR036291 YPN_1682 YPN_1683 IPR002142 Peptidase S49 YPN_1683 IPR013703 Peptidase S49, N-terminal proteobacteria YPN_1683 IPR029045 ClpP/crotonase-like domain YPN_1684 IPR019633 Protein of unknown function DUF2498 YPN_1684 IPR038191 YPN_1684 YPN_1686 IPR003601 DNA topoisomerase, type IA, domain 2 YPN_1686 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPN_1686 IPR005733 DNA topoisomerase I, bacterial-type YPN_1686 IPR006171 Toprim domain YPN_1686 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YPN_1686 IPR013497 DNA topoisomerase, type IA, central YPN_1686 IPR013498 DNA topoisomerase, type IA, zn finger YPN_1686 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPN_1686 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPN_1686 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPN_1686 IPR023405 DNA topoisomerase, type IA, core domain YPN_1686 IPR023406 DNA topoisomerase, type IA, active site YPN_1686 IPR028612 DNA topoisomerase I, type IA YPN_1687 IPR000847 Transcription regulator HTH, LysR YPN_1687 IPR005119 LysR, substrate-binding YPN_1687 IPR036388 YPN_1687 YPN_1687 IPR036390 YPN_1687 YPN_1689 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YPN_1689 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPN_1689 IPR006249 Aconitate/iron regulatory protein 2 YPN_1689 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPN_1689 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPN_1689 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPN_1689 IPR036008 YPN_1689 YPN_1690 IPR000926 GTP cyclohydrolase II, RibA YPN_1690 IPR032677 YPN_1690 YPN_1690 IPR036144 YPN_1690 YPN_1692 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPN_1692 IPR036938 YPN_1692 YPN_1693 IPR010445 Protein of unknown function DUF1049 YPN_1693 IPR032906 YPN_1693 YPN_1694 IPR011990 Tetratricopeptide-like helical domain YPN_1694 IPR019734 Tetratricopeptide repeat YPN_1694 IPR030865 YPN_1694 YPN_1695 IPR010985 Ribbon-helix-helix YPN_1695 IPR013321 Arc-type ribbon-helix-helix YPN_1696 IPR001754 Orotidine 5'-phosphate decarboxylase domain YPN_1696 IPR011060 Ribulose-phosphate binding barrel YPN_1696 IPR013785 Aldolase-type TIM barrel YPN_1696 IPR014732 Orotidine 5'-phosphate decarboxylase YPN_1696 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YPN_1697 IPR001950 Translation initiation factor SUI1 YPN_1697 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YPN_1697 IPR036877 YPN_1697 YPN_1698 IPR008816 Glycine zipper 2TM domain YPN_1699 IPR001303 Class II aldolase/adducin N-terminal YPN_1699 IPR004661 L-ribulose-5-phosphate 4-epimerase YPN_1699 IPR036409 YPN_1699 YPN_1700 IPR018680 Protein of unknown function DUF2164 YPN_1701 IPR001585 Transaldolase YPN_1701 IPR004731 Transaldolase 3A/3B YPN_1701 IPR013785 Aldolase-type TIM barrel YPN_1701 IPR018225 Transaldolase, active site YPN_1702 IPR007423 Protein of unknown function DUF466 YPN_1703 IPR003706 Carbon starvation protein CstA YPN_1703 IPR025299 CstA C-terminal domain YPN_1704 IPR001900 YPN_1704 YPN_1704 IPR003029 Ribosomal protein S1, RNA-binding domain YPN_1704 IPR004476 Ribonuclease II/ribonuclease R YPN_1704 IPR011129 Cold shock protein YPN_1704 IPR011804 Ribonuclease II YPN_1704 IPR012340 Nucleic acid-binding, OB-fold YPN_1704 IPR013223 Ribonuclease B, N-terminal OB domain YPN_1704 IPR022966 Ribonuclease II/R, conserved site YPN_1705 IPR011701 Major facilitator superfamily YPN_1705 IPR036259 YPN_1705 YPN_1706 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_1706 IPR036291 YPN_1706 YPN_1707 IPR000445 Helix-hairpin-helix motif YPN_1707 IPR003265 HhH-GPD domain YPN_1707 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPN_1707 IPR004035 Endonuclease III, iron-sulphur binding site YPN_1707 IPR004036 Endonuclease III-like, conserved site-2 YPN_1707 IPR005759 Endonuclease III YPN_1707 IPR011257 DNA glycosylase YPN_1707 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPN_1708 IPR003667 Electron transport complex, Rnf/Nqr YPN_1708 IPR010968 Electron transport complex, RnfE YPN_1709 IPR007329 FMN-binding YPN_1709 IPR010209 Electron transport complex, RnfG YPN_1710 IPR004338 NADH-quinone reductase NQR2/RnfD YPN_1710 IPR011303 Electron transport complex, RnfD YPN_1711 IPR009057 Homeodomain-like YPN_1711 IPR011256 Regulatory factor, effector binding domain YPN_1711 IPR018060 DNA binding HTH domain, AraC-type YPN_1711 IPR020449 Transcription regulator HTH, AraC- type YPN_1711 IPR029442 GyrI-like small molecule binding domain YPN_1712 IPR009051 Alpha-helical ferredoxin YPN_1712 IPR010208 Electron transport complex protein RnfC YPN_1712 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YPN_1712 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_1712 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1712 IPR019554 Soluble ligand binding domain YPN_1712 IPR026902 RnfC Barrel sandwich hybrid domain YPN_1712 IPR037225 YPN_1712 YPN_1713 IPR007202 4Fe-4S domain YPN_1713 IPR010207 Electron transport complex, RnfB YPN_1713 IPR011005 Dihydropteroate synthase-like YPN_1713 IPR016463 Electron transport complex, RnfB, Proteobacteria YPN_1713 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1714 IPR003667 Electron transport complex, Rnf/Nqr YPN_1714 IPR011293 Electron transport complex, RnfA YPN_1715 IPR019690 Protein of unknown function DUF2569 YPN_1717 IPR003439 ABC transporter-like YPN_1717 IPR011527 ABC transporter type 1, transmembrane domain YPN_1717 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1717 IPR036640 YPN_1717 YPN_1718 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1719 IPR003997 RTX secretion protein D, Gram-negative bacteria YPN_1719 IPR039562 YPN_1719 YPN_1720 IPR003997 RTX secretion protein D, Gram-negative bacteria YPN_1720 IPR006143 RND efflux pump, membrane fusion protein YPN_1720 IPR006144 Secretion protein HlyD, conserved site YPN_1721 IPR003439 ABC transporter-like YPN_1721 IPR003593 AAA+ ATPase domain YPN_1721 IPR005074 Peptidase C39, bacteriocin processing YPN_1721 IPR010132 ATPase, type I secretion system, HlyB YPN_1721 IPR011527 ABC transporter type 1, transmembrane domain YPN_1721 IPR017871 ABC transporter, conserved site YPN_1721 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1721 IPR036640 YPN_1721 YPN_1722 IPR003762 L-arabinose isomerase YPN_1722 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPN_1722 IPR009015 L-fucose isomerase, N-terminal/central domain YPN_1722 IPR024664 L-arabinose isomerase, C-terminal YPN_1722 IPR038583 YPN_1722 YPN_1723 IPR005929 L-ribulokinase YPN_1723 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_1723 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_1724 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPN_1724 IPR026266 L-arabinose-binding periplasmic protein YPN_1724 IPR028082 Periplasmic binding protein-like I YPN_1725 IPR003439 ABC transporter-like YPN_1725 IPR003593 AAA+ ATPase domain YPN_1725 IPR017871 ABC transporter, conserved site YPN_1725 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1726 IPR001851 ABC transporter, permease YPN_1727 IPR003313 AraC-type arabinose-binding/dimerisation domain YPN_1727 IPR009057 Homeodomain-like YPN_1727 IPR037923 YPN_1727 YPN_1728 IPR009057 Homeodomain-like YPN_1728 IPR018060 DNA binding HTH domain, AraC-type YPN_1728 IPR018062 HTH domain AraC-type, conserved site YPN_1728 IPR020449 Transcription regulator HTH, AraC- type YPN_1729 IPR000683 Oxidoreductase, N-terminal YPN_1729 IPR004104 Oxidoreductase, C-terminal YPN_1729 IPR036291 YPN_1729 YPN_1730 IPR016833 Putative sodium bile acid cotransporter YPN_1730 IPR038770 YPN_1730 YPN_1733 IPR001207 Transposase, mutator type YPN_1734 IPR010352 Protein of unknown function DUF945 YPN_1735 IPR001250 Mannose-6-phosphate isomerase, type I YPN_1735 IPR011051 RmlC-like cupin domain YPN_1735 IPR014710 RmlC-like jelly roll fold YPN_1735 IPR016305 Mannose-6-phosphate isomerase YPN_1735 IPR018050 Phosphomannose isomerase, type I, conserved site YPN_1736 IPR000362 Fumarate lyase family YPN_1736 IPR005677 Fumarate hydratase, class II YPN_1736 IPR008948 L-Aspartase-like YPN_1736 IPR018951 Fumarase C, C-terminal YPN_1736 IPR020557 Fumarate lyase, conserved site YPN_1736 IPR022761 Fumarate lyase, N-terminal YPN_1736 IPR024083 Fumarase/histidase, N-terminal YPN_1737 IPR008865 DNA replication terminus site-binding protein YPN_1737 IPR036381 YPN_1737 YPN_1737 IPR036384 YPN_1737 YPN_1738 IPR005829 Sugar transporter, conserved site YPN_1738 IPR011701 Major facilitator superfamily YPN_1738 IPR036259 YPN_1738 YPN_1739 IPR000847 Transcription regulator HTH, LysR YPN_1739 IPR005119 LysR, substrate-binding YPN_1739 IPR036388 YPN_1739 YPN_1739 IPR036390 YPN_1739 YPN_1740 IPR000600 ROK YPN_1740 IPR036388 YPN_1740 YPN_1740 IPR036390 YPN_1740 YPN_1741 IPR004472 Dethiobiotin synthase BioD YPN_1741 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1742 IPR001807 Chloride channel, voltage gated YPN_1742 IPR014743 Chloride channel, core YPN_1742 IPR023790 Chloride channel, voltage-gated, ClcB YPN_1743 IPR000843 Transcription regulator HTH, LacI YPN_1743 IPR010982 Lambda repressor-like, DNA-binding domain YPN_1743 IPR028082 Periplasmic binding protein-like I YPN_1745 IPR025997 Periplasmic binding protein domain YPN_1745 IPR028082 Periplasmic binding protein-like I YPN_1747 IPR000515 MetI-like domain YPN_1747 IPR035906 YPN_1747 YPN_1748 IPR003439 ABC transporter-like YPN_1748 IPR003593 AAA+ ATPase domain YPN_1748 IPR017871 ABC transporter, conserved site YPN_1748 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1749 IPR000845 Nucleoside phosphorylase domain YPN_1749 IPR011271 AMP nucleosidase YPN_1749 IPR018953 AMP nucleoside phosphorylase, N-terminal YPN_1749 IPR035994 YPN_1749 YPN_1749 IPR037109 YPN_1749 YPN_1751 IPR009216 Virulence factor SrfB YPN_1752 IPR017030 Virulence effector, SrfC YPN_1753 IPR017030 Virulence effector, SrfC YPN_1754 IPR010846 Protein of unknown function DUF1460 YPN_1754 IPR038765 YPN_1754 YPN_1755 IPR000399 TPP-binding enzyme, conserved site YPN_1755 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPN_1755 IPR012000 Thiamine pyrophosphate enzyme, central domain YPN_1755 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPN_1755 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPN_1755 IPR029035 DHS-like NAD/FAD-binding domain YPN_1755 IPR029061 Thiamin diphosphate-binding fold YPN_1757 IPR006439 HAD hydrolase, subfamily IA YPN_1757 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YPN_1757 IPR023198 Phosphoglycolate phosphatase, domain 2 YPN_1757 IPR023214 HAD-like domain YPN_1757 IPR036412 YPN_1757 YPN_1758 IPR025266 TerB, N-terminal YPN_1758 IPR028932 TerB-C domain YPN_1758 IPR029024 TerB-like YPN_1759 IPR001952 Alkaline phosphatase YPN_1759 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_1759 IPR017850 Alkaline-phosphatase-like, core domain YPN_1759 IPR018299 Alkaline phosphatase, active site YPN_1760 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPN_1760 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPN_1760 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPN_1760 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YPN_1760 IPR036217 YPN_1760 YPN_1760 IPR036388 YPN_1760 YPN_1760 IPR036631 YPN_1760 YPN_1761 IPR000595 Cyclic nucleotide-binding domain YPN_1761 IPR012318 Helix-turn-helix motif, Crp-type YPN_1761 IPR014710 RmlC-like jelly roll fold YPN_1761 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPN_1761 IPR018490 Cyclic nucleotide-binding-like YPN_1761 IPR036388 YPN_1761 YPN_1761 IPR036390 YPN_1761 YPN_1762 IPR006016 UspA YPN_1763 IPR012136 NADP transhydrogenase, beta subunit YPN_1763 IPR029035 DHS-like NAD/FAD-binding domain YPN_1763 IPR034300 YPN_1763 YPN_1764 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPN_1764 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPN_1764 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YPN_1764 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YPN_1764 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YPN_1764 IPR026255 NAD(P) transhydrogenase, alpha subunit YPN_1764 IPR036291 YPN_1764 YPN_1765 IPR010854 Domain of unknown function DUF1471 YPN_1765 IPR025539 YdgH protein YPN_1765 IPR025543 Dodecin-like YPN_1765 IPR036275 YPN_1765 YPN_1766 IPR002293 Amino acid/polyamine transporter I YPN_1766 IPR004754 Amino acid antiporter YPN_1768 IPR001789 Signal transduction response regulator, receiver domain YPN_1768 IPR001867 Signal transduction response regulator, C-terminal YPN_1768 IPR011006 CheY-like superfamily YPN_1768 IPR016032 Signal transduction response regulator, C-terminal effector YPN_1768 IPR036388 YPN_1768 YPN_1769 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1769 IPR003660 HAMP linker domain YPN_1769 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1769 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1769 IPR036097 YPN_1769 YPN_1769 IPR036890 YPN_1769 YPN_1770 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase YPN_1771 IPR001207 Transposase, mutator type YPN_1772 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase YPN_1773 IPR002686 Transposase IS200-like YPN_1773 IPR036515 YPN_1773 YPN_1774 IPR005165 Anthrax toxin, edema factor, central YPN_1774 IPR022385 Rhs repeat-associated core YPN_1774 IPR035099 YPN_1774 YPN_1774 IPR037017 YPN_1774 YPN_1775 IPR035099 YPN_1775 YPN_1777 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPN_1777 IPR016174 Di-haem cytochrome, transmembrane YPN_1779 IPR001254 Peptidase S1 YPN_1779 IPR001314 Peptidase S1A, chymotrypsin-type YPN_1779 IPR009003 Trypsin-like cysteine/serine peptidase domain YPN_1779 IPR018114 Peptidase S1, trypsin family, active site YPN_1779 IPR033116 YPN_1779 YPN_1780 IPR001387 Cro/C1-type helix-turn-helix domain YPN_1780 IPR010982 Lambda repressor-like, DNA-binding domain YPN_1781 IPR001650 Helicase, C-terminal YPN_1781 IPR003593 AAA+ ATPase domain YPN_1781 IPR007502 Helicase-associated domain YPN_1781 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type YPN_1781 IPR011545 DEAD/DEAH box helicase domain YPN_1781 IPR011709 Domain of unknown function DUF1605 YPN_1781 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_1781 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal YPN_1781 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1782 IPR003680 Flavodoxin-like fold YPN_1782 IPR023048 NADH-azoreductase, FMN-dependent YPN_1782 IPR029039 Flavoprotein-like YPN_1783 IPR007324 Sugar-binding domain, putative YPN_1783 IPR036388 YPN_1783 YPN_1783 IPR037171 YPN_1783 YPN_1784 IPR000669 Mannitol dehydrogenase YPN_1784 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_1784 IPR013118 Mannitol dehydrogenase, C-terminal YPN_1784 IPR013131 Mannitol dehydrogenase, N-terminal YPN_1784 IPR013328 Dehydrogenase, multihelical YPN_1784 IPR036291 YPN_1784 YPN_1785 IPR008309 Uncharacterised conserved protein UCP025560 YPN_1786 IPR025985 YnbE-like lipoprotein YPN_1787 IPR021730 Dicarboxylate transport YPN_1788 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPN_1788 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPN_1788 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPN_1788 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPN_1788 IPR036291 YPN_1788 YPN_1789 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPN_1789 IPR038670 YPN_1789 YPN_1790 IPR005590 Protein of unknown function DUF333 YPN_1791 IPR003416 MgtC/SapB/SrpB transporter YPN_1792 IPR000390 Small multidrug resistance protein family YPN_1793 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YPN_1793 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YPN_1793 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPN_1793 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPN_1793 IPR011895 Pyruvate-flavodoxin oxidoreductase YPN_1793 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_1793 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1793 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YPN_1793 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YPN_1793 IPR029061 Thiamin diphosphate-binding fold YPN_1793 IPR033412 YPN_1793 YPN_1793 IPR037112 YPN_1793 YPN_1794 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YPN_1794 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA YPN_1794 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1794 IPR035107 YPN_1794 YPN_1795 IPR013094 Alpha/beta hydrolase fold-3 YPN_1795 IPR029058 Alpha/Beta hydrolase fold YPN_1796 IPR000551 MerR-type HTH domain YPN_1796 IPR009061 DNA binding domain, putative YPN_1798 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPN_1799 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_1799 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPN_1799 IPR030678 YPN_1799 YPN_1800 IPR000834 Peptidase M14, carboxypeptidase A YPN_1801 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPN_1801 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPN_1801 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPN_1801 IPR029017 Enolase N-terminal domain-like YPN_1801 IPR029065 Enolase C-terminal domain-like YPN_1801 IPR036849 YPN_1801 YPN_1802 IPR002065 Putative thiol peroxidase Tpx YPN_1802 IPR013740 Redoxin YPN_1802 IPR018219 Thiol peroxidase conserved site YPN_1802 IPR036249 YPN_1802 YPN_1803 IPR002686 Transposase IS200-like YPN_1803 IPR036515 YPN_1803 YPN_1804 IPR000014 PAS domain YPN_1804 IPR002078 RNA polymerase sigma factor 54 interaction domain YPN_1804 IPR003593 AAA+ ATPase domain YPN_1804 IPR009057 Homeodomain-like YPN_1804 IPR013767 PAS fold YPN_1804 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPN_1804 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPN_1804 IPR025944 Sigma-54 interaction domain, conserved site YPN_1804 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1804 IPR030828 YPN_1804 YPN_1804 IPR035965 YPN_1804 YPN_1805 IPR011979 Conserved hypothetical protein CHP02293 YPN_1805 IPR024467 Domain of unknown function DUF2384 YPN_1806 IPR014914 RES YPN_1807 IPR006507 Uncharacterised protein family UPF0283 YPN_1807 IPR021147 Protein of unknown function DUF697 YPN_1808 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPN_1809 IPR014321 Phage shock protein, PspD YPN_1810 IPR007168 Phage shock protein, PspC, N-terminal YPN_1810 IPR014320 Phage shock protein, PspC YPN_1811 IPR009554 Phage shock protein, PspB YPN_1812 IPR007157 PspA/IM30 YPN_1812 IPR014319 Phage shock protein, PspA YPN_1813 IPR002078 RNA polymerase sigma factor 54 interaction domain YPN_1813 IPR002197 DNA binding HTH domain, Fis-type YPN_1813 IPR003593 AAA+ ATPase domain YPN_1813 IPR009057 Homeodomain-like YPN_1813 IPR014317 Transcription activator PspF YPN_1813 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPN_1813 IPR025944 Sigma-54 interaction domain, conserved site YPN_1813 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1814 IPR002686 Transposase IS200-like YPN_1814 IPR036515 YPN_1814 YPN_1815 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_1815 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPN_1815 IPR030678 YPN_1815 YPN_1816 IPR000515 MetI-like domain YPN_1816 IPR035906 YPN_1816 YPN_1817 IPR000515 MetI-like domain YPN_1817 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPN_1817 IPR035906 YPN_1817 YPN_1818 IPR003439 ABC transporter-like YPN_1818 IPR003593 AAA+ ATPase domain YPN_1818 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPN_1818 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1819 IPR003439 ABC transporter-like YPN_1819 IPR003593 AAA+ ATPase domain YPN_1819 IPR017871 ABC transporter, conserved site YPN_1819 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1820 IPR029032 AhpD-like YPN_1821 IPR000109 Proton-dependent oligopeptide transporter family YPN_1821 IPR005279 Amino acid/peptide transporter family YPN_1821 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPN_1821 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YPN_1821 IPR036259 YPN_1821 YPN_1822 IPR009698 Protein of unknown function DUF1282 YPN_1823 IPR020317 Uncharacterised protein family YjbD YPN_1824 IPR004045 Glutathione S-transferase, N-terminal YPN_1824 IPR004046 Glutathione S-transferase, C-terminal YPN_1824 IPR036249 YPN_1824 YPN_1824 IPR036282 YPN_1824 YPN_1825 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase YPN_1825 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPN_1825 IPR023685 Pyridoxal kinase PdxY YPN_1825 IPR029056 Ribokinase-like YPN_1826 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_1826 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPN_1826 IPR002307 Tyrosine-tRNA ligase YPN_1826 IPR002942 RNA-binding S4 domain YPN_1826 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1826 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YPN_1826 IPR036986 YPN_1826 YPN_1827 IPR000659 Pyridoxamine 5'-phosphate oxidase YPN_1827 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YPN_1827 IPR012349 FMN-binding split barrel YPN_1827 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YPN_1827 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YPN_1828 IPR018660 C-type lysozyme, inhibitor YPN_1828 IPR036328 YPN_1828 YPN_1829 IPR005338 Anhydro-N-acetylmuramic acid kinase YPN_1830 IPR008816 Glycine zipper 2TM domain YPN_1831 IPR000835 MarR-type HTH domain YPN_1831 IPR023071 Transcriptional regulator, SlyA YPN_1831 IPR023187 Transcriptional regulator MarR-type, conserved site YPN_1831 IPR036388 YPN_1831 YPN_1831 IPR036390 YPN_1831 YPN_1832 IPR000917 Sulfatase YPN_1832 IPR012549 Domain of unknown function DUF1705 YPN_1832 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_1832 IPR017850 Alkaline-phosphatase-like, core domain YPN_1833 IPR001647 DNA-binding HTH domain, TetR-type YPN_1833 IPR009057 Homeodomain-like YPN_1833 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPN_1833 IPR036271 YPN_1833 YPN_1834 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPN_1834 IPR013785 Aldolase-type TIM barrel YPN_1835 IPR022385 Rhs repeat-associated core YPN_1836 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPN_1836 IPR004361 Glyoxalase I YPN_1836 IPR018146 Glyoxalase I, conserved site YPN_1836 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPN_1837 IPR005987 Ribonuclease T YPN_1837 IPR012337 Ribonuclease H-like domain YPN_1837 IPR013520 Exonuclease, RNase T/DNA polymerase III YPN_1837 IPR036397 YPN_1837 YPN_1838 IPR002109 Glutaredoxin YPN_1838 IPR004480 Monothiol glutaredoxin-related YPN_1838 IPR014434 Monothiol glutaredoxin YPN_1838 IPR036249 YPN_1838 YPN_1839 IPR000064 Endopeptidase, NLPC/P60 domain YPN_1839 IPR038765 YPN_1839 YPN_1840 IPR001189 Manganese/iron superoxide dismutase YPN_1840 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPN_1840 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPN_1840 IPR019833 Manganese/iron superoxide dismutase, binding site YPN_1840 IPR036314 YPN_1840 YPN_1840 IPR036324 YPN_1840 YPN_1841 IPR000843 Transcription regulator HTH, LacI YPN_1841 IPR010982 Lambda repressor-like, DNA-binding domain YPN_1841 IPR023588 Transcription regulator HTH, PurR YPN_1841 IPR028082 Periplasmic binding protein-like I YPN_1842 IPR000847 Transcription regulator HTH, LysR YPN_1842 IPR005119 LysR, substrate-binding YPN_1842 IPR036388 YPN_1842 YPN_1842 IPR036390 YPN_1842 YPN_1843 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPN_1843 IPR011701 Major facilitator superfamily YPN_1843 IPR036259 YPN_1843 YPN_1844 IPR003333 Mycolic acid cyclopropane synthase YPN_1844 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1845 IPR001783 Lumazine-binding protein YPN_1845 IPR017938 Riboflavin synthase-like beta-barrel YPN_1845 IPR023366 ATP synthase subunit alpha-like domain YPN_1845 IPR026017 Lumazine-binding domain YPN_1846 IPR002528 Multi antimicrobial extrusion protein YPN_1846 IPR022913 Multidrug resistance protein MdtK YPN_1847 IPR001697 Pyruvate kinase YPN_1847 IPR011037 Pyruvate kinase-like, insert domain YPN_1847 IPR015793 Pyruvate kinase, barrel YPN_1847 IPR015795 Pyruvate kinase, C-terminal YPN_1847 IPR015806 Pyruvate kinase, beta-barrel insert domain YPN_1847 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_1847 IPR018209 Pyruvate kinase, active site YPN_1847 IPR036918 YPN_1847 YPN_1848 IPR006817 Lipoprotein leucine-zipper YPN_1848 IPR016367 Murein-lipoprotein YPN_1849 IPR002686 Transposase IS200-like YPN_1849 IPR036515 YPN_1849 YPN_1850 IPR001584 Integrase, catalytic core YPN_1850 IPR006120 Resolvase, HTH domain YPN_1850 IPR009057 Homeodomain-like YPN_1850 IPR012337 Ribonuclease H-like domain YPN_1851 IPR001270 ClpA/B family YPN_1851 IPR002611 IstB-like ATP-binding protein YPN_1851 IPR003593 AAA+ ATPase domain YPN_1851 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1851 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_1853 IPR005490 L,D-transpeptidase catalytic domain YPN_1853 IPR038063 YPN_1853 YPN_1854 IPR003808 Fe-S metabolism associated domain, SufE-like YPN_1854 IPR023939 Cysteine desulfuration protein SufE YPN_1855 IPR000192 Aminotransferase class V domain YPN_1855 IPR010970 Cysteine desulfurase, SufS YPN_1855 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1855 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1855 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1855 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPN_1856 IPR000825 SUF system FeS cluster assembly, SufBD YPN_1856 IPR011542 SUF system FeS cluster assembly, SufD YPN_1856 IPR037284 YPN_1856 YPN_1857 IPR003439 ABC transporter-like YPN_1857 IPR003593 AAA+ ATPase domain YPN_1857 IPR010230 FeS cluster assembly SUF system, ATPase SufC YPN_1857 IPR017871 ABC transporter, conserved site YPN_1857 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1858 IPR000825 SUF system FeS cluster assembly, SufBD YPN_1858 IPR010231 SUF system FeS cluster assembly, SufB YPN_1858 IPR037284 YPN_1858 YPN_1859 IPR000361 FeS cluster biogenesis YPN_1859 IPR016092 FeS cluster insertion protein YPN_1859 IPR017870 FeS cluster insertion, C-terminal, conserved site YPN_1859 IPR035903 YPN_1859 YPN_1860 IPR003736 Phenylacetic acid degradation-related domain YPN_1860 IPR006683 Thioesterase superfamily YPN_1860 IPR029069 HotDog domain YPN_1860 IPR030863 YPN_1860 YPN_1861 IPR004113 FAD-linked oxidase, C-terminal YPN_1861 IPR006094 FAD linked oxidase, N-terminal YPN_1861 IPR009051 Alpha-helical ferredoxin YPN_1861 IPR016164 FAD-linked oxidase-like, C-terminal YPN_1861 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_1861 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_1861 IPR036318 YPN_1861 YPN_1862 IPR002549 Uncharacterised protein family UPF0118 YPN_1863 IPR000121 PEP-utilising enzyme, C-terminal YPN_1863 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YPN_1863 IPR006319 Phosphoenolpyruvate synthase YPN_1863 IPR008279 PEP-utilising enzyme, mobile domain YPN_1863 IPR013815 ATP-grasp fold, subdomain 1 YPN_1863 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_1863 IPR018274 PEP-utilising enzyme, active site YPN_1863 IPR023151 PEP-utilising enzyme, conserved site YPN_1863 IPR036637 YPN_1863 YPN_1864 IPR005177 Bifunctional kinase-pyrophosphorylase YPN_1864 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain YPN_1864 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPN_1865 IPR006218 DAHP synthetase I/KDSA YPN_1865 IPR006219 DHAP synthase, class 1 YPN_1865 IPR013785 Aldolase-type TIM barrel YPN_1866 IPR003846 Uncharacterised protein family UPF0061 YPN_1867 IPR003846 Uncharacterised protein family UPF0061 YPN_1868 IPR004143 Biotin/lipoate A/B protein ligase YPN_1868 IPR004562 Lipoyltransferase/lipoate-protein ligase YPN_1868 IPR019491 Lipoate protein ligase, C-terminal YPN_1868 IPR023741 Lipoate-protein ligase A YPN_1869 IPR000064 Endopeptidase, NLPC/P60 domain YPN_1869 IPR038765 YPN_1869 YPN_1870 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YPN_1871 IPR000620 Drug/metabolite transporter YPN_1871 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YPN_1872 IPR003342 Glycosyl transferase, family 39 YPN_1872 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YPN_1873 IPR002509 Polysaccharide deacetylase YPN_1873 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_1873 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YPN_1874 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_1874 IPR002376 Formyl transferase, N-terminal YPN_1874 IPR005793 Formyl transferase, C-terminal YPN_1874 IPR011034 Formyl transferase, C-terminal-like YPN_1874 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPN_1874 IPR036291 YPN_1874 YPN_1874 IPR036477 YPN_1874 YPN_1875 IPR001173 Glycosyltransferase 2-like YPN_1875 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YPN_1875 IPR029044 Nucleotide-diphospho-sugar transferases YPN_1876 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPN_1876 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_1876 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_1876 IPR015424 Pyridoxal phosphate-dependent transferase YPN_1876 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YPN_1877 IPR003439 ABC transporter-like YPN_1877 IPR003593 AAA+ ATPase domain YPN_1877 IPR017871 ABC transporter, conserved site YPN_1877 IPR023693 ABC transporter, vitamin B12, BtuD YPN_1877 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1878 IPR000889 Glutathione peroxidase YPN_1878 IPR029759 Glutathione peroxidase active site YPN_1878 IPR033674 YPN_1878 YPN_1878 IPR036249 YPN_1878 YPN_1879 IPR000522 ABC transporter, permease protein YPN_1879 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YPN_1879 IPR037294 YPN_1879 YPN_1880 IPR019638 Protein of unknown function DUF2502 YPN_1881 IPR000119 Histone-like bacterial DNA-binding protein YPN_1881 IPR005684 Integration host factor, alpha subunit YPN_1881 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPN_1881 IPR020816 Histone-like DNA-binding protein, conserved site YPN_1882 IPR002547 tRNA-binding domain YPN_1882 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YPN_1882 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding YPN_1882 IPR005146 B3/B4 tRNA-binding domain YPN_1882 IPR005147 tRNA synthetase, B5-domain YPN_1882 IPR009061 DNA binding domain, putative YPN_1882 IPR012340 Nucleic acid-binding, OB-fold YPN_1882 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPN_1882 IPR036690 YPN_1882 YPN_1883 IPR002319 Phenylalanyl-tRNA synthetase YPN_1883 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YPN_1883 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YPN_1883 IPR010978 tRNA-binding arm YPN_1883 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YPN_1885 IPR005813 Ribosomal protein L20 YPN_1885 IPR035566 YPN_1885 YPN_1886 IPR001706 Ribosomal protein L35, non-mitochondrial YPN_1886 IPR018265 Ribosomal protein L35, conserved site YPN_1886 IPR021137 Ribosomal protein L35 YPN_1886 IPR037229 YPN_1886 YPN_1887 IPR001288 Translation initiation factor 3 YPN_1887 IPR019815 Translation initiation factor 3, C-terminal YPN_1887 IPR036788 YPN_1887 YPN_1888 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPN_1888 IPR002320 Threonine-tRNA ligase, class IIa YPN_1888 IPR004095 TGS YPN_1888 IPR004154 Anticodon-binding YPN_1888 IPR012675 Beta-grasp domain YPN_1888 IPR012676 TGS-like YPN_1888 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPN_1888 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YPN_1888 IPR036621 YPN_1888 YPN_1889 IPR025309 KTSC domain YPN_1891 IPR002771 Multiple antibiotic resistance (MarC)-related YPN_1892 IPR000189 Prokaryotic transglycosylase, active site YPN_1892 IPR008258 Lytic transglycosylase-like SLT domain YPN_1892 IPR023346 Lysozyme-like domain YPN_1893 IPR006127 Periplasmic solute binding protein family YPN_1893 IPR006128 Adhesion lipoprotein YPN_1893 IPR006129 Adhesin B YPN_1894 IPR003439 ABC transporter-like YPN_1894 IPR003593 AAA+ ATPase domain YPN_1894 IPR017871 ABC transporter, conserved site YPN_1894 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1895 IPR001626 ABC-3 YPN_1895 IPR037294 YPN_1895 YPN_1896 IPR001626 ABC-3 YPN_1896 IPR037294 YPN_1896 YPN_1898 IPR011009 Protein kinase-like domain YPN_1898 IPR016477 Fructosamine/Ketosamine-3-kinase YPN_1899 IPR025229 YniB-like protein YPN_1900 IPR006439 HAD hydrolase, subfamily IA YPN_1900 IPR023198 Phosphoglycolate phosphatase, domain 2 YPN_1900 IPR023214 HAD-like domain YPN_1900 IPR036412 YPN_1900 YPN_1901 IPR001207 Transposase, mutator type YPN_1902 IPR001207 Transposase, mutator type YPN_1904 IPR011051 RmlC-like cupin domain YPN_1904 IPR013096 Cupin 2, conserved barrel YPN_1904 IPR014710 RmlC-like jelly roll fold YPN_1904 IPR025499 Pectin degradation protein KdgF YPN_1905 IPR007045 5-keto 4-deoxyuronate isomerase YPN_1905 IPR011051 RmlC-like cupin domain YPN_1905 IPR014710 RmlC-like jelly roll fold YPN_1905 IPR021120 KduI/IolB isomerase YPN_1905 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain YPN_1906 IPR002347 Glucose/ribitol dehydrogenase YPN_1906 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPN_1906 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_1906 IPR036291 YPN_1906 YPN_1907 IPR010702 Periplasmic pectate lyase YPN_1908 IPR000515 MetI-like domain YPN_1908 IPR035906 YPN_1908 YPN_1909 IPR000515 MetI-like domain YPN_1909 IPR035906 YPN_1909 YPN_1910 IPR003439 ABC transporter-like YPN_1910 IPR003593 AAA+ ATPase domain YPN_1910 IPR008995 Molybdate/tungstate binding, C-terminal YPN_1910 IPR017871 ABC transporter, conserved site YPN_1910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1911 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_1912 IPR009331 Oligogalacturonate-specific porin YPN_1913 IPR007404 Protein of unknown function DUF457 YPN_1913 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted YPN_1914 IPR001991 Sodium:dicarboxylate symporter YPN_1914 IPR036458 YPN_1914 YPN_1915 IPR002477 Peptidoglycan binding-like YPN_1915 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPN_1915 IPR036365 YPN_1915 YPN_1915 IPR036366 YPN_1915 YPN_1915 IPR036505 YPN_1915 YPN_1916 IPR005471 Transcription regulator IclR, N-terminal YPN_1916 IPR014757 Transcription regulator IclR, C-terminal YPN_1916 IPR029016 GAF domain-like YPN_1916 IPR036388 YPN_1916 YPN_1916 IPR036390 YPN_1916 YPN_1917 IPR015943 WD40/YVTN repeat-like-containing domain YPN_1917 IPR027946 Oligogalacturonate lyase domain YPN_1918 IPR011701 Major facilitator superfamily YPN_1918 IPR036259 YPN_1918 YPN_1919 IPR001829 Pili assembly chaperone, bacterial YPN_1919 IPR008962 PapD-like YPN_1919 IPR013783 Immunoglobulin-like fold YPN_1919 IPR016147 PapD, N-terminal, bacterial YPN_1919 IPR016148 Pili assembly chaperone, C-terminal domain YPN_1919 IPR018046 Pili assembly chaperone, conserved site YPN_1919 IPR036316 YPN_1919 YPN_1920 IPR000259 Fimbrial-type adhesion domain YPN_1920 IPR008966 Adhesion domain YPN_1920 IPR036937 YPN_1920 YPN_1921 IPR000015 Outer membrane usher protein YPN_1921 IPR018030 Fimbrial membrane usher, conserved site YPN_1921 IPR025885 PapC, N-terminal domain YPN_1921 IPR025949 PapC-like, C-terminal domain YPN_1921 IPR037224 YPN_1921 YPN_1922 IPR001829 Pili assembly chaperone, bacterial YPN_1922 IPR008962 PapD-like YPN_1922 IPR013783 Immunoglobulin-like fold YPN_1922 IPR016147 PapD, N-terminal, bacterial YPN_1922 IPR016148 Pili assembly chaperone, C-terminal domain YPN_1922 IPR018046 Pili assembly chaperone, conserved site YPN_1922 IPR036316 YPN_1922 YPN_1923 IPR008966 Adhesion domain YPN_1923 IPR036937 YPN_1923 YPN_1923 IPR039458 YPN_1923 YPN_1924 IPR001915 Peptidase M48 YPN_1924 IPR022919 Peptidase M48, protease HtpX, putative YPN_1925 IPR001478 PDZ domain YPN_1925 IPR004447 C-terminal-processing peptidase S41A YPN_1925 IPR005151 Tail specific protease YPN_1925 IPR020992 Tail specific protease, C-terminal YPN_1925 IPR029045 ClpP/crotonase-like domain YPN_1925 IPR036034 YPN_1925 YPN_1926 IPR016103 ProQ/FinO domain YPN_1926 IPR023529 Transporter ProP effector, ProQ YPN_1926 IPR035236 YPN_1926 YPN_1926 IPR036442 YPN_1926 YPN_1927 IPR003018 GAF domain YPN_1927 IPR029016 GAF domain-like YPN_1928 IPR005219 Conserved hypothetical protein CHP00155 YPN_1928 IPR007498 Paraquat-inducible protein A YPN_1929 IPR003399 Mammalian cell entry-related YPN_1930 IPR007893 Spore coat protein U YPN_1931 IPR007893 Spore coat protein U YPN_1932 IPR007893 Spore coat protein U YPN_1933 IPR008962 PapD-like YPN_1933 IPR013783 Immunoglobulin-like fold YPN_1933 IPR016147 PapD, N-terminal, bacterial YPN_1934 IPR000015 Outer membrane usher protein YPN_1934 IPR025949 PapC-like, C-terminal domain YPN_1935 IPR007893 Spore coat protein U YPN_1936 IPR009950 Protein of unknown function DUF1480 YPN_1937 IPR007374 ASCH domain YPN_1937 IPR009326 Protein of unknown function DUF984 YPN_1937 IPR015947 PUA-like domain YPN_1939 IPR001584 Integrase, catalytic core YPN_1939 IPR006120 Resolvase, HTH domain YPN_1939 IPR009057 Homeodomain-like YPN_1939 IPR012337 Ribonuclease H-like domain YPN_1940 IPR001270 ClpA/B family YPN_1940 IPR002611 IstB-like ATP-binding protein YPN_1940 IPR003593 AAA+ ATPase domain YPN_1940 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_1940 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_1942 IPR002641 Patatin/Phospholipase A2-related YPN_1942 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPN_1944 IPR000821 Alanine racemase YPN_1944 IPR001608 Alanine racemase, N-terminal YPN_1944 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPN_1944 IPR011079 Alanine racemase, C-terminal YPN_1944 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPN_1944 IPR029066 PLP-binding barrel YPN_1946 IPR005594 YadA-like, C-terminal YPN_1946 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPN_1946 IPR008640 Head domain of trimeric autotransporter adhesin YPN_1946 IPR011049 Serralysin-like metalloprotease, C-terminal YPN_1947 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPN_1947 IPR008640 Head domain of trimeric autotransporter adhesin YPN_1947 IPR011049 Serralysin-like metalloprotease, C-terminal YPN_1948 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPN_1948 IPR036365 YPN_1948 YPN_1948 IPR036366 YPN_1948 YPN_1948 IPR036505 YPN_1948 YPN_1950 IPR007439 Chemotaxis phosphatase, CheZ YPN_1951 IPR001789 Signal transduction response regulator, receiver domain YPN_1951 IPR011006 CheY-like superfamily YPN_1952 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YPN_1952 IPR001789 Signal transduction response regulator, receiver domain YPN_1952 IPR008248 Signal transduction response regulator, chemotaxis, CheB YPN_1952 IPR011006 CheY-like superfamily YPN_1952 IPR035909 YPN_1952 YPN_1953 IPR000780 MCP methyltransferase, CheR-type YPN_1953 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal YPN_1953 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPN_1953 IPR026024 Chemotaxis protein methyltransferase CheR YPN_1953 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_1953 IPR036804 YPN_1953 YPN_1954 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPN_1954 IPR003660 HAMP linker domain YPN_1954 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_1954 IPR004090 Chemotaxis methyl-accepting receptor YPN_1954 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPN_1954 IPR035440 YPN_1954 YPN_1955 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPN_1955 IPR003660 HAMP linker domain YPN_1955 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_1955 IPR004090 Chemotaxis methyl-accepting receptor YPN_1955 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPN_1955 IPR035440 YPN_1955 YPN_1957 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein YPN_1957 IPR019286 Protein of unknown function DUF2339, transmembrane YPN_1958 IPR005546 Autotransporter beta-domain YPN_1958 IPR006315 Outer membrane autotransporter barrel YPN_1958 IPR011050 Pectin lyase fold/virulence factor YPN_1958 IPR012332 P22 tailspike C-terminal domain-like YPN_1958 IPR036709 YPN_1958 YPN_1959 IPR013559 YheO-like YPN_1959 IPR039445 YPN_1959 YPN_1960 IPR013022 Xylose isomerase-like, TIM barrel domain YPN_1960 IPR036237 YPN_1960 YPN_1961 IPR006056 Enamine/imine deaminase YjgF-like YPN_1961 IPR006175 YjgF/Yer057p/UK114 family YPN_1961 IPR035959 YPN_1961 YPN_1962 IPR011701 Major facilitator superfamily YPN_1962 IPR036259 YPN_1962 YPN_1963 IPR002545 CheW-like protein YPN_1963 IPR036061 YPN_1963 YPN_1964 IPR002545 CheW-like protein YPN_1964 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1964 IPR004105 Histidine kinase CheA-like, homodimeric domain YPN_1964 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1964 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPN_1964 IPR015162 CheY binding YPN_1964 IPR035891 YPN_1964 YPN_1964 IPR036061 YPN_1964 YPN_1964 IPR036097 YPN_1964 YPN_1964 IPR036641 YPN_1964 YPN_1964 IPR036890 YPN_1964 YPN_1964 IPR037006 YPN_1964 YPN_1965 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_1965 IPR025713 Motility protein B, N-terminal domain YPN_1965 IPR036737 YPN_1965 YPN_1966 IPR000540 Flagellar motor protein MotA, conserved site YPN_1966 IPR002898 MotA/TolQ/ExbB proton channel YPN_1966 IPR022522 Flagellar motor stator, MotA YPN_1967 IPR007944 Flagellar transcriptional activator FlhC YPN_1968 IPR023559 Flagellar transcriptional activator FlhD YPN_1968 IPR036194 YPN_1968 YPN_1969 IPR001757 Cation-transporting P-type ATPase YPN_1969 IPR004014 Cation-transporting P-type ATPase, N-terminal YPN_1969 IPR006068 Cation-transporting P-type ATPase, C-terminal YPN_1969 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB YPN_1969 IPR008250 P-type ATPase, A domain YPN_1969 IPR018303 P-type ATPase, phosphorylation site YPN_1969 IPR023214 HAD-like domain YPN_1969 IPR023298 P-type ATPase, transmembrane domain YPN_1969 IPR023299 P-type ATPase, cytoplasmic domain N YPN_1969 IPR036412 YPN_1969 YPN_1970 IPR003416 MgtC/SapB/SrpB transporter YPN_1971 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPN_1971 IPR003660 HAMP linker domain YPN_1971 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_1971 IPR004090 Chemotaxis methyl-accepting receptor YPN_1971 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPN_1971 IPR035440 YPN_1971 YPN_1972 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_1973 IPR019717 Dextransucrase DSRB YPN_1974 IPR002059 Cold-shock protein, DNA-binding YPN_1974 IPR011129 Cold shock protein YPN_1974 IPR012156 Cold shock, CspA YPN_1974 IPR012340 Nucleic acid-binding, OB-fold YPN_1974 IPR019844 Cold-shock conserved site YPN_1975 IPR004199 Beta galactosidase small chain/ domain 5 YPN_1975 IPR006101 Glycoside hydrolase, family 2 YPN_1975 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YPN_1975 IPR006103 Glycoside hydrolase, family 2, TIM barrel YPN_1975 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YPN_1975 IPR008979 Galactose-binding domain-like YPN_1975 IPR011013 Galactose mutarotase-like domain YPN_1975 IPR013783 Immunoglobulin-like fold YPN_1975 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPN_1975 IPR017853 Glycoside hydrolase, superfamily YPN_1975 IPR023230 Glycoside hydrolase, family 2, conserved site YPN_1975 IPR023232 Glycoside hydrolase, family 2, active site YPN_1975 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YPN_1975 IPR032312 YPN_1975 YPN_1975 IPR036156 YPN_1975 YPN_1976 IPR011032 GroES (chaperonin 10)-like YPN_1976 IPR013149 Alcohol dehydrogenase, C-terminal YPN_1976 IPR013154 Alcohol dehydrogenase GroES-like YPN_1976 IPR014189 Quinone oxidoreductase PIG3 YPN_1976 IPR020843 Polyketide synthase, enoylreductase YPN_1976 IPR036291 YPN_1976 YPN_1977 IPR019713 Inner membrane protein YlaC YPN_1979 IPR000485 AsnC-type HTH domain YPN_1979 IPR011008 Dimeric alpha-beta barrel YPN_1979 IPR019887 Transcription regulator AsnC-type, C-terminal YPN_1979 IPR019888 Transcription regulator AsnC-type YPN_1979 IPR036388 YPN_1979 YPN_1979 IPR036390 YPN_1979 YPN_1980 IPR021266 Kdo hydroxylase YPN_1981 IPR017704 Putative selenium-binding protein YdfZ YPN_1982 IPR000560 Histidine phosphatase superfamily, clade-2 YPN_1982 IPR029033 Histidine phosphatase superfamily YPN_1982 IPR033379 YPN_1982 YPN_1985 IPR002577 Helix-turn-helix, HxlR type YPN_1985 IPR036388 YPN_1985 YPN_1985 IPR036390 YPN_1985 YPN_1986 IPR008030 NmrA-like domain YPN_1986 IPR036291 YPN_1986 YPN_1987 IPR000014 PAS domain YPN_1987 IPR001610 PAC motif YPN_1987 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_1987 IPR004090 Chemotaxis methyl-accepting receptor YPN_1987 IPR013655 PAS fold-3 YPN_1987 IPR035965 YPN_1987 YPN_1989 IPR000843 Transcription regulator HTH, LacI YPN_1989 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPN_1989 IPR010982 Lambda repressor-like, DNA-binding domain YPN_1989 IPR028082 Periplasmic binding protein-like I YPN_1990 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YPN_1990 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPN_1990 IPR024084 Isopropylmalate dehydrogenase-like domain YPN_1991 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPN_1991 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPN_1991 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPN_1991 IPR020103 Pseudouridine synthase, catalytic domain YPN_1992 IPR000086 NUDIX hydrolase domain YPN_1992 IPR015797 NUDIX hydrolase domain-like YPN_1992 IPR020084 NUDIX hydrolase, conserved site YPN_1992 IPR020476 NUDIX hydrolase YPN_1993 IPR004506 tRNA-specific 2-thiouridylase YPN_1993 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_1993 IPR023382 Adenine nucleotide alpha hydrolase-like domains YPN_1994 IPR007451 Uncharacterised protein family UPF0274 YPN_1994 IPR035932 YPN_1994 YPN_1995 IPR000362 Fumarate lyase family YPN_1995 IPR004769 Adenylosuccinate lyase YPN_1995 IPR008948 L-Aspartase-like YPN_1995 IPR013539 Adenylosuccinate lyase PurB, C-terminal YPN_1995 IPR020557 Fumarate lyase, conserved site YPN_1995 IPR022761 Fumarate lyase, N-terminal YPN_1995 IPR024083 Fumarase/histidase, N-terminal YPN_1996 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_1996 IPR027385 Outer membrane protein beta-barrel YPN_1997 IPR001789 Signal transduction response regulator, receiver domain YPN_1997 IPR001867 Signal transduction response regulator, C-terminal YPN_1997 IPR011006 CheY-like superfamily YPN_1997 IPR036388 YPN_1997 YPN_1998 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_1998 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_1998 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_1998 IPR015014 PhoQ Sensor YPN_1998 IPR036097 YPN_1998 YPN_1998 IPR036890 YPN_1998 YPN_1998 IPR038429 YPN_1998 YPN_1999 IPR003347 JmjC domain YPN_2000 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPN_2000 IPR002933 Peptidase M20 YPN_2000 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPN_2000 IPR011650 Peptidase M20, dimerisation domain YPN_2000 IPR036264 YPN_2000 YPN_2001 IPR003000 Sirtuin family YPN_2001 IPR026591 Sirtuin family, catalytic core small domain YPN_2001 IPR027546 Sirtuin, class III YPN_2001 IPR029035 DHS-like NAD/FAD-binding domain YPN_2002 IPR000600 ROK YPN_2003 IPR000600 ROK YPN_2004 IPR003838 Permease FtsX-like YPN_2004 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family YPN_2004 IPR011926 Lipoprotein releasing system, transmembrane protein LolE YPN_2004 IPR025857 MacB-like periplasmic core domain YPN_2005 IPR003439 ABC transporter-like YPN_2005 IPR003593 AAA+ ATPase domain YPN_2005 IPR011924 Lipoprotein releasing system, ATP-binding protein YPN_2005 IPR017871 ABC transporter, conserved site YPN_2005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2006 IPR003838 Permease FtsX-like YPN_2006 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family YPN_2006 IPR025857 MacB-like periplasmic core domain YPN_2007 IPR001650 Helicase, C-terminal YPN_2007 IPR003711 CarD-like/TRCF domain YPN_2007 IPR004576 Transcription-repair coupling factor YPN_2007 IPR005118 Transcription-repair-coupling factor, C-terminal domain YPN_2007 IPR011545 DEAD/DEAH box helicase domain YPN_2007 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_2007 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2007 IPR036101 YPN_2007 YPN_2007 IPR037235 YPN_2007 YPN_2008 IPR008816 Glycine zipper 2TM domain YPN_2009 IPR001207 Transposase, mutator type YPN_2012 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_2012 IPR036188 YPN_2012 YPN_2013 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPN_2013 IPR022987 Uncharacterised protein family UPF0227 YPN_2013 IPR029058 Alpha/Beta hydrolase fold YPN_2014 IPR001764 Glycoside hydrolase, family 3, N-terminal YPN_2014 IPR017853 Glycoside hydrolase, superfamily YPN_2014 IPR019800 Glycoside hydrolase, family 3, active site YPN_2014 IPR022956 Beta-hexosaminidase, bacterial YPN_2014 IPR036962 YPN_2014 YPN_2015 IPR002575 Aminoglycoside phosphotransferase YPN_2015 IPR011009 Protein kinase-like domain YPN_2015 IPR014093 Thiamine kinase YPN_2016 IPR014094 Penicillin-binding protein activator LpoB YPN_2017 IPR010824 Protein of unknown function DUF1425 YPN_2017 IPR038483 YPN_2017 YPN_2018 IPR001310 Histidine triad (HIT) protein YPN_2018 IPR019808 Histidine triad, conserved site YPN_2018 IPR036265 YPN_2018 YPN_2019 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPN_2019 IPR036291 YPN_2019 YPN_2020 IPR002686 Transposase IS200-like YPN_2020 IPR036515 YPN_2020 YPN_2021 IPR001996 Phosphotransferase system, IIB component, type 1 YPN_2021 IPR003352 Phosphotransferase system, EIIC YPN_2021 IPR011299 PTS system glucose-specific IIBC component YPN_2021 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPN_2021 IPR036878 YPN_2021 YPN_2022 IPR001130 TatD family YPN_2022 IPR015991 Uncharacterised deoxyribonuclease TatD-type YPN_2022 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPN_2022 IPR032466 YPN_2022 YPN_2023 IPR004622 DNA polymerase III, delta prime subunit YPN_2023 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPN_2023 IPR015199 DNA polymerase III, delta subunit, C-terminal YPN_2023 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2024 IPR018094 Thymidylate kinase YPN_2024 IPR018095 Thymidylate kinase, conserved site YPN_2024 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2024 IPR039430 YPN_2024 YPN_2025 IPR003770 Uncharacterised protein family UPF0755, YceG-like YPN_2026 IPR001544 Aminotransferase, class IV YPN_2026 IPR017824 Aminodeoxychorismate lyase, class IV YPN_2026 IPR018300 Aminotransferase, class IV, conserved site YPN_2026 IPR036038 YPN_2026 YPN_2027 IPR002686 Transposase IS200-like YPN_2027 IPR036515 YPN_2027 YPN_2028 IPR014030 Beta-ketoacyl synthase, N-terminal YPN_2028 IPR014031 Beta-ketoacyl synthase, C-terminal YPN_2028 IPR016039 Thiolase-like YPN_2028 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPN_2028 IPR018201 Beta-ketoacyl synthase, active site YPN_2028 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPN_2029 IPR003231 Acyl carrier protein (ACP) YPN_2029 IPR006162 Phosphopantetheine attachment site YPN_2029 IPR009081 Acyl carrier protein-like YPN_2029 IPR036736 YPN_2029 YPN_2030 IPR002347 Glucose/ribitol dehydrogenase YPN_2030 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPN_2030 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_2030 IPR036291 YPN_2030 YPN_2031 IPR001227 Acyl transferase domain YPN_2031 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPN_2031 IPR014043 Acyl transferase YPN_2031 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPN_2031 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPN_2031 IPR020801 Polyketide synthase, acyl transferase domain YPN_2031 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPN_2032 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPN_2032 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YPN_2032 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPN_2032 IPR016039 Thiolase-like YPN_2033 IPR003664 Fatty acid synthesis PlsX protein YPN_2033 IPR012281 Phospholipid biosynthesis protein, PlsX-like YPN_2034 IPR002677 Ribosomal protein L32p YPN_2034 IPR011332 Zinc-binding ribosomal protein YPN_2035 IPR003772 Protein of unknown function DUF177 YPN_2036 IPR003697 Maf-like protein YPN_2036 IPR029001 Inosine triphosphate pyrophosphatase-like YPN_2037 IPR002942 RNA-binding S4 domain YPN_2037 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPN_2037 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPN_2037 IPR006225 Pseudouridine synthase, RluC/RluD YPN_2037 IPR020103 Pseudouridine synthase, catalytic domain YPN_2037 IPR036986 YPN_2037 YPN_2038 IPR003029 Ribosomal protein S1, RNA-binding domain YPN_2038 IPR004659 Ribonuclease E/G YPN_2038 IPR012340 Nucleic acid-binding, OB-fold YPN_2038 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPN_2038 IPR021968 Polyribonucleotide phosphorylase C-terminal YPN_2038 IPR022967 RNA-binding domain, S1 YPN_2038 IPR028878 Ribonuclease E YPN_2039 IPR001207 Transposase, mutator type YPN_2040 IPR025730 Biofilm regulator BssS YPN_2041 IPR010391 DNA damage-inducible protein DinI-like YPN_2041 IPR036687 YPN_2041 YPN_2042 IPR002195 Dihydroorotase, conserved site YPN_2042 IPR004721 Dihydroorotase homodimeric type YPN_2042 IPR006680 Amidohydrolase 1 YPN_2042 IPR032466 YPN_2042 YPN_2043 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPN_2043 IPR011008 Dimeric alpha-beta barrel YPN_2044 IPR001207 Transposase, mutator type YPN_2045 IPR006076 FAD dependent oxidoreductase YPN_2045 IPR023493 N-methyl-L-tryptophan oxidase MTOX YPN_2045 IPR036188 YPN_2045 YPN_2046 IPR000792 Transcription regulator LuxR, C-terminal YPN_2046 IPR016032 Signal transduction response regulator, C-terminal effector YPN_2046 IPR036388 YPN_2046 YPN_2047 IPR002549 Uncharacterised protein family UPF0118 YPN_2048 IPR001763 Rhodanese-like domain YPN_2048 IPR020936 Uncharacterised protein family UPF0176 YPN_2048 IPR022111 Protein of unknown function DUF3650 YPN_2048 IPR036873 YPN_2048 YPN_2051 IPR000620 Drug/metabolite transporter YPN_2052 IPR001690 Autoinducer synthesis protein YPN_2052 IPR016181 Acyl-CoA N-acyltransferase YPN_2052 IPR018311 Autoinducer synthesis, conserved site YPN_2053 IPR000792 Transcription regulator LuxR, C-terminal YPN_2053 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPN_2053 IPR016032 Signal transduction response regulator, C-terminal effector YPN_2053 IPR036388 YPN_2053 YPN_2053 IPR036693 YPN_2053 YPN_2054 IPR000847 Transcription regulator HTH, LysR YPN_2054 IPR005119 LysR, substrate-binding YPN_2054 IPR036388 YPN_2054 YPN_2054 IPR036390 YPN_2054 YPN_2055 IPR005828 General substrate transporter YPN_2055 IPR005829 Sugar transporter, conserved site YPN_2055 IPR036259 YPN_2055 YPN_2056 IPR014826 Formaldehyde-activating enzyme YPN_2056 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_2056 IPR037075 YPN_2056 YPN_2057 IPR023210 NADP-dependent oxidoreductase domain YPN_2057 IPR036812 YPN_2057 YPN_2058 IPR013396 CRISPR-associated protein Csy4 YPN_2059 IPR013399 CRISPR-associated protein Csy3 YPN_2060 IPR013398 CRISPR-associated protein Csy2 YPN_2061 IPR013397 CRISPR-associated protein Csy1 YPN_2062 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPN_2062 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2062 IPR038257 YPN_2062 YPN_2063 IPR002729 CRISPR-associated protein Cas1 YPN_2063 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPN_2064 IPR006685 Mechanosensitive ion channel MscS YPN_2064 IPR010920 Like-Sm (LSM) domain YPN_2064 IPR023408 YPN_2064 YPN_2066 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_2067 IPR015045 Protein of unknown function DUF1861 YPN_2067 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPN_2068 IPR007184 Mannoside phosphorylase YPN_2068 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPN_2069 IPR000515 MetI-like domain YPN_2069 IPR035906 YPN_2069 YPN_2070 IPR000515 MetI-like domain YPN_2070 IPR035906 YPN_2070 YPN_2071 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_2072 IPR000843 Transcription regulator HTH, LacI YPN_2072 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2072 IPR028082 Periplasmic binding protein-like I YPN_2073 IPR005841 Alpha-D-phosphohexomutase superfamily YPN_2073 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPN_2073 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPN_2073 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPN_2073 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPN_2073 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPN_2073 IPR016066 Alpha-D-phosphohexomutase, conserved site YPN_2073 IPR036900 YPN_2073 YPN_2074 IPR003439 ABC transporter-like YPN_2074 IPR003593 AAA+ ATPase domain YPN_2074 IPR008995 Molybdate/tungstate binding, C-terminal YPN_2074 IPR013611 Transport-associated OB, type 2 YPN_2074 IPR017871 ABC transporter, conserved site YPN_2074 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2078 IPR025459 Protein of unknown function DUF4279 YPN_2081 IPR006914 VENN motif-containing domain YPN_2083 IPR016630 Uncharacterised conserved protein UCP015278 YPN_2084 IPR006914 VENN motif-containing domain YPN_2084 IPR008619 Filamentous haemagglutinin repeat YPN_2084 IPR008638 Filamentous haemagglutinin, N-terminal YPN_2084 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPN_2084 IPR011050 Pectin lyase fold/virulence factor YPN_2084 IPR012334 Pectin lyase fold YPN_2084 IPR025157 Haemagluttinin repeat YPN_2085 IPR005565 Haemolysin activator HlyB YPN_2085 IPR013686 Polypeptide-transport-associated, ShlB-type YPN_2085 IPR027282 Two partner secretion pathway transporter YPN_2085 IPR035251 YPN_2085 YPN_2086 IPR000951 Phthalate dioxygenase reductase YPN_2086 IPR001041 2Fe-2S ferredoxin-type domain YPN_2086 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_2086 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPN_2086 IPR008333 Oxidoreductase, FAD-binding domain YPN_2086 IPR012675 Beta-grasp domain YPN_2086 IPR017938 Riboflavin synthase-like beta-barrel YPN_2086 IPR036010 YPN_2086 YPN_2086 IPR039003 YPN_2086 YPN_2086 IPR039261 YPN_2086 YPN_2087 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPN_2088 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YPN_2088 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPN_2088 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YPN_2088 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPN_2088 IPR036922 YPN_2088 YPN_2089 IPR000060 BCCT transporter family YPN_2089 IPR018093 BCCT transporter, conserved site YPN_2090 IPR011829 Tartrate dehydrogenase YPN_2090 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPN_2090 IPR024084 Isopropylmalate dehydrogenase-like domain YPN_2091 IPR000847 Transcription regulator HTH, LysR YPN_2091 IPR005119 LysR, substrate-binding YPN_2091 IPR036388 YPN_2091 YPN_2091 IPR036390 YPN_2091 YPN_2092 IPR000843 Transcription regulator HTH, LacI YPN_2092 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2092 IPR025997 Periplasmic binding protein domain YPN_2092 IPR028082 Periplasmic binding protein-like I YPN_2093 IPR001851 ABC transporter, permease YPN_2094 IPR003439 ABC transporter-like YPN_2094 IPR003593 AAA+ ATPase domain YPN_2094 IPR017871 ABC transporter, conserved site YPN_2094 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2095 IPR025997 Periplasmic binding protein domain YPN_2095 IPR028082 Periplasmic binding protein-like I YPN_2096 IPR011032 GroES (chaperonin 10)-like YPN_2096 IPR013149 Alcohol dehydrogenase, C-terminal YPN_2096 IPR013154 Alcohol dehydrogenase GroES-like YPN_2096 IPR020843 Polyketide synthase, enoylreductase YPN_2096 IPR036291 YPN_2096 YPN_2097 IPR031829 YPN_2097 YPN_2097 IPR038334 YPN_2097 YPN_2098 IPR031829 YPN_2098 YPN_2098 IPR038334 YPN_2098 YPN_2099 IPR002524 Cation efflux protein YPN_2099 IPR027469 Cation efflux protein transmembrane domain YPN_2100 IPR000758 Virulence-related outer membrane protein YPN_2100 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_2100 IPR027385 Outer membrane protein beta-barrel YPN_2102 IPR000620 Drug/metabolite transporter YPN_2103 IPR000182 GNAT domain YPN_2103 IPR016181 Acyl-CoA N-acyltransferase YPN_2104 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YPN_2104 IPR023506 Trans-aconitate 2-methyltransferase YPN_2104 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2105 IPR002177 DNA-binding protein Dps YPN_2105 IPR008331 Ferritin/DPS protein domain YPN_2105 IPR009078 Ferritin-like superfamily YPN_2105 IPR012347 Ferritin-related YPN_2105 IPR023067 DNA protection during starvation protein, gammaproteobacteria YPN_2105 IPR023188 DNA-binding protein Dps, conserved site YPN_2106 IPR003848 Domain of unknown function DUF218 YPN_2106 IPR011990 Tetratricopeptide-like helical domain YPN_2107 IPR001320 Ionotropic glutamate receptor YPN_2107 IPR001638 Extracellular solute-binding protein, family 3 YPN_2107 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPN_2108 IPR000515 MetI-like domain YPN_2108 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_2108 IPR035906 YPN_2108 YPN_2109 IPR003439 ABC transporter-like YPN_2109 IPR003593 AAA+ ATPase domain YPN_2109 IPR017871 ABC transporter, conserved site YPN_2109 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2109 IPR030679 YPN_2109 YPN_2110 IPR000014 PAS domain YPN_2110 IPR001610 PAC motif YPN_2110 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_2110 IPR004090 Chemotaxis methyl-accepting receptor YPN_2110 IPR013656 PAS fold-4 YPN_2110 IPR035965 YPN_2110 YPN_2111 IPR001584 Integrase, catalytic core YPN_2111 IPR006120 Resolvase, HTH domain YPN_2111 IPR009057 Homeodomain-like YPN_2111 IPR012337 Ribonuclease H-like domain YPN_2112 IPR001270 ClpA/B family YPN_2112 IPR002611 IstB-like ATP-binding protein YPN_2112 IPR003593 AAA+ ATPase domain YPN_2112 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2112 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_2114 IPR010286 Ribosomal RNA large subunit methyltransferase F-like YPN_2114 IPR016909 Ribosomal RNA large subunit methyltransferase F YPN_2114 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2115 IPR010854 Domain of unknown function DUF1471 YPN_2115 IPR025543 Dodecin-like YPN_2115 IPR036275 YPN_2115 YPN_2117 IPR000312 Glycosyl transferase, family 3 YPN_2117 IPR017459 Glycosyl transferase family 3, N-terminal domain YPN_2117 IPR035902 YPN_2117 YPN_2117 IPR036320 YPN_2117 YPN_2118 IPR000873 AMP-dependent synthetase/ligase YPN_2118 IPR010192 2-succinylbenzoate--CoA ligase YPN_2118 IPR020845 AMP-binding, conserved site YPN_2119 IPR010196 O-succinylbenzoic acid (OSB) synthetase YPN_2119 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPN_2119 IPR029017 Enolase N-terminal domain-like YPN_2119 IPR029065 Enolase C-terminal domain-like YPN_2119 IPR036849 YPN_2119 YPN_2120 IPR001753 Crotonase superfamily YPN_2120 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase YPN_2120 IPR014748 Crontonase, C-terminal YPN_2120 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPN_2120 IPR029045 ClpP/crotonase-like domain YPN_2121 IPR000073 Alpha/beta hydrolase fold-1 YPN_2121 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YPN_2121 IPR029058 Alpha/Beta hydrolase fold YPN_2122 IPR004433 Menaquinone biosynthesis protein MenD YPN_2122 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPN_2122 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPN_2122 IPR029061 Thiamin diphosphate-binding fold YPN_2122 IPR032264 YPN_2122 YPN_2123 IPR004561 Isochorismate synthase YPN_2123 IPR005801 ADC synthase YPN_2123 IPR015890 Chorismate binding, C-terminal YPN_2123 IPR034681 YPN_2123 YPN_2125 IPR010279 Protein of unknown function DUF883, ElaB YPN_2128 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPN_2128 IPR004786 6-phosphogluconate dehydratase YPN_2128 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPN_2128 IPR037237 YPN_2128 YPN_2129 IPR005624 Domain of unknown function DUF336 YPN_2129 IPR010371 Uncharacterised protein family UPF0303 YPN_2129 IPR038084 YPN_2129 YPN_2130 IPR011701 Major facilitator superfamily YPN_2130 IPR036259 YPN_2130 YPN_2131 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPN_2131 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPN_2131 IPR036291 YPN_2131 YPN_2132 IPR000843 Transcription regulator HTH, LacI YPN_2132 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPN_2132 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2132 IPR028082 Periplasmic binding protein-like I YPN_2133 IPR003790 Protein of unknown function DUF187 YPN_2133 IPR013785 Aldolase-type TIM barrel YPN_2133 IPR017853 Glycoside hydrolase, superfamily YPN_2134 IPR002347 Glucose/ribitol dehydrogenase YPN_2134 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_2134 IPR036291 YPN_2134 YPN_2135 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPN_2135 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2135 IPR031322 YPN_2135 YPN_2136 IPR004375 Conserved hypothetical protein CHP00022 YPN_2136 IPR037012 YPN_2136 YPN_2138 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPN_2138 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YPN_2139 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPN_2139 IPR003918 NADH:ubiquinone oxidoreductase YPN_2139 IPR010227 NADH-quinone oxidoreductase, chain M/4 YPN_2140 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal YPN_2140 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPN_2140 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YPN_2140 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YPN_2141 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YPN_2141 IPR039428 YPN_2141 YPN_2142 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YPN_2143 IPR010226 NADH-quinone oxidoreductase, chain I YPN_2143 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_2143 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_2144 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YPN_2144 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YPN_2145 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YPN_2145 IPR006656 Molybdopterin oxidoreductase YPN_2145 IPR006657 Molydopterin dinucleotide-binding domain YPN_2145 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPN_2145 IPR009010 Aspartate decarboxylase-like domain YPN_2145 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YPN_2145 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YPN_2145 IPR036010 YPN_2145 YPN_2146 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YPN_2146 IPR011537 NADH ubiquinone oxidoreductase, F subunit YPN_2146 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YPN_2146 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YPN_2146 IPR037207 YPN_2146 YPN_2146 IPR037225 YPN_2146 YPN_2147 IPR002023 NADH-quinone oxidoreductase subunit E-like YPN_2147 IPR036249 YPN_2147 YPN_2148 IPR001135 NADH-quinone oxidoreductase, subunit D YPN_2148 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YPN_2148 IPR010218 NADH dehydrogenase, subunit C YPN_2148 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YPN_2148 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YPN_2148 IPR023062 NADH dehydrogenase, subunit CD YPN_2148 IPR029014 NiFe hydrogenase-like YPN_2148 IPR037232 YPN_2148 YPN_2148 IPR038290 YPN_2148 YPN_2149 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YPN_2149 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YPN_2150 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YPN_2150 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YPN_2150 IPR038430 YPN_2150 YPN_2151 IPR000847 Transcription regulator HTH, LysR YPN_2151 IPR005119 LysR, substrate-binding YPN_2151 IPR036388 YPN_2151 YPN_2151 IPR036390 YPN_2151 YPN_2152 IPR004839 Aminotransferase, class I/classII YPN_2152 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2152 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2152 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2153 IPR003607 HD/PDEase domain YPN_2153 IPR006674 HD domain YPN_2153 IPR022971 5'-deoxynucleotidase YfbR YPN_2154 IPR004680 Citrate transporter-like domain YPN_2154 IPR006037 Regulator of K+ conductance, C-terminal YPN_2154 IPR031312 YPN_2154 YPN_2154 IPR036721 YPN_2154 YPN_2155 IPR006439 HAD hydrolase, subfamily IA YPN_2155 IPR023198 Phosphoglycolate phosphatase, domain 2 YPN_2155 IPR023214 HAD-like domain YPN_2155 IPR036412 YPN_2155 YPN_2156 IPR005587 Uncharacterised protein family UPF0304, YfbU YPN_2156 IPR023145 YfbU, helix-hairpin domain YPN_2156 IPR023146 YfbU, alpha-helical bundle domain YPN_2157 IPR007334 Uncharacterised protein family UPF0208 YPN_2158 IPR000890 Aliphatic acid kinase, short-chain YPN_2158 IPR004372 Acetate/Proprionate kinase YPN_2158 IPR023865 Aliphatic acid kinase, short-chain, conserved site YPN_2159 IPR002505 Phosphate acetyl/butaryl transferase YPN_2159 IPR004614 Phosphate acetyltransferase YPN_2159 IPR010766 DRTGG YPN_2159 IPR016475 Phosphate acetyltransferase, bacteria YPN_2159 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2159 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like YPN_2160 IPR000843 Transcription regulator HTH, LacI YPN_2160 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2160 IPR028082 Periplasmic binding protein-like I YPN_2161 IPR002178 PTS EIIA type-2 domain YPN_2161 IPR016152 Phosphotransferase/anion transporter YPN_2162 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPN_2162 IPR036095 YPN_2162 YPN_2163 IPR001207 Transposase, mutator type YPN_2164 IPR001207 Transposase, mutator type YPN_2165 IPR004703 Phosphotransferase system, sugar-specific permease component YPN_2166 IPR000086 NUDIX hydrolase domain YPN_2166 IPR015797 NUDIX hydrolase domain-like YPN_2166 IPR024195 NUDIX hydrolase, YfcD, predicted YPN_2167 IPR000979 Phosphodiesterase MJ0936/Vps29 YPN_2167 IPR020935 Phosphodiesterase YfcE, conserved site YPN_2167 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type YPN_2167 IPR029052 Metallo-dependent phosphatase-like YPN_2168 IPR001633 EAL domain YPN_2168 IPR035919 YPN_2168 YPN_2169 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_2169 IPR010099 Sugar nucleotide epimerase YfcH,-like putative YPN_2169 IPR013549 Domain of unknown function DUF1731 YPN_2169 IPR036291 YPN_2169 YPN_2170 IPR003439 ABC transporter-like YPN_2170 IPR003593 AAA+ ATPase domain YPN_2170 IPR017871 ABC transporter, conserved site YPN_2170 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2170 IPR030679 YPN_2170 YPN_2171 IPR000515 MetI-like domain YPN_2171 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_2171 IPR035906 YPN_2171 YPN_2172 IPR000515 MetI-like domain YPN_2172 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_2172 IPR035906 YPN_2172 YPN_2173 IPR001638 Extracellular solute-binding protein, family 3 YPN_2173 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPN_2173 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPN_2174 IPR003382 Flavoprotein YPN_2174 IPR004507 Decarboxylase UbiX/Pad1 YPN_2174 IPR036551 YPN_2174 YPN_2175 IPR000836 Phosphoribosyltransferase domain YPN_2175 IPR005854 Amidophosphoribosyl transferase YPN_2175 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_2175 IPR029057 Phosphoribosyltransferase-like YPN_2176 IPR003825 Colicin V production, CvpA YPN_2177 IPR007730 Sporulation-related domain YPN_2177 IPR032898 YPN_2177 YPN_2177 IPR036680 YPN_2177 YPN_2178 IPR001645 Folylpolyglutamate synthetase YPN_2178 IPR004101 Mur ligase, C-terminal YPN_2178 IPR013221 Mur ligase, central YPN_2178 IPR018109 Folylpolyglutamate synthetase, conserved site YPN_2178 IPR036565 YPN_2178 YPN_2178 IPR036615 YPN_2178 YPN_2179 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YPN_2179 IPR029045 ClpP/crotonase-like domain YPN_2179 IPR034733 YPN_2179 YPN_2180 IPR032816 YPN_2180 YPN_2181 IPR001406 Pseudouridine synthase I, TruA YPN_2181 IPR020095 Pseudouridine synthase I, TruA, C-terminal YPN_2181 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YPN_2181 IPR020103 Pseudouridine synthase, catalytic domain YPN_2182 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPN_2182 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPN_2182 IPR036291 YPN_2182 YPN_2183 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPN_2183 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPN_2183 IPR020921 Erythronate-4-phosphate dehydrogenase YPN_2183 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YPN_2183 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPN_2183 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPN_2183 IPR036291 YPN_2183 YPN_2183 IPR038251 YPN_2183 YPN_2184 IPR003313 AraC-type arabinose-binding/dimerisation domain YPN_2184 IPR009057 Homeodomain-like YPN_2184 IPR011051 RmlC-like cupin domain YPN_2184 IPR014710 RmlC-like jelly roll fold YPN_2184 IPR018060 DNA binding HTH domain, AraC-type YPN_2184 IPR018062 HTH domain AraC-type, conserved site YPN_2184 IPR020449 Transcription regulator HTH, AraC- type YPN_2185 IPR000620 Drug/metabolite transporter YPN_2186 IPR023597 Flagellar regulator Flk YPN_2187 IPR000259 Fimbrial-type adhesion domain YPN_2187 IPR008966 Adhesion domain YPN_2187 IPR036937 YPN_2187 YPN_2188 IPR001920 Asp/Glu racemase YPN_2188 IPR004380 Aspartate racemase YPN_2188 IPR015942 Asp/Glu/hydantoin racemase YPN_2188 IPR018187 Asp/Glu racemase, active site YPN_2189 IPR014030 Beta-ketoacyl synthase, N-terminal YPN_2189 IPR014031 Beta-ketoacyl synthase, C-terminal YPN_2189 IPR016039 Thiolase-like YPN_2189 IPR018201 Beta-ketoacyl synthase, active site YPN_2189 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPN_2190 IPR006076 FAD dependent oxidoreductase YPN_2190 IPR008471 MnmC-like methyltransferase YPN_2190 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YPN_2190 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YPN_2190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2190 IPR036188 YPN_2190 YPN_2191 IPR014987 Uncharacterised protein family YfcL YPN_2192 IPR007411 Protein of unknown function DUF462 YPN_2193 IPR002781 Transmembrane protein TauE like YPN_2194 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YPN_2194 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPN_2195 IPR000453 Chorismate synthase YPN_2195 IPR020541 Chorismate synthase, conserved site YPN_2195 IPR035904 YPN_2195 YPN_2196 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_2196 IPR004556 Modification methylase HemK YPN_2196 IPR007848 Methyltransferase small domain YPN_2196 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YPN_2196 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2197 IPR002625 Smr protein/MutS2 C-terminal YPN_2197 IPR022990 Uncharacterised protein family UPF0115 YPN_2197 IPR036063 YPN_2197 YPN_2199 IPR004449 Phosphohistidine phosphatase SixA, subgroup YPN_2199 IPR013078 Histidine phosphatase superfamily, clade-1 YPN_2199 IPR029033 Histidine phosphatase superfamily YPN_2200 IPR001753 Crotonase superfamily YPN_2200 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPN_2200 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPN_2200 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPN_2200 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_2200 IPR012802 Fatty oxidation complex, alpha subunit FadJ YPN_2200 IPR029045 ClpP/crotonase-like domain YPN_2200 IPR036291 YPN_2200 YPN_2201 IPR002155 Thiolase YPN_2201 IPR012806 Acetyl-CoA C-acyltransferase FadI YPN_2201 IPR016039 Thiolase-like YPN_2201 IPR020610 Thiolase, active site YPN_2201 IPR020613 Thiolase, conserved site YPN_2201 IPR020615 Thiolase, acyl-enzyme intermediate active site YPN_2201 IPR020616 Thiolase, N-terminal YPN_2201 IPR020617 Thiolase, C-terminal YPN_2202 IPR005272 Conserved hypothetical protein CHP00743 YPN_2202 IPR035571 YPN_2202 YPN_2203 IPR005017 Membrane protein, aromatic hydrocarbon degradation YPN_2204 IPR007428 VacJ-like lipoprotein YPN_2205 IPR011990 Tetratricopeptide-like helical domain YPN_2205 IPR017560 Cytochrome c-type biogenesis protein CcmI YPN_2206 IPR005616 Cytochrome C biogenesis protein CcmH YPN_2206 IPR038297 YPN_2206 YPN_2207 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YPN_2207 IPR013740 Redoxin YPN_2207 IPR017937 Thioredoxin, conserved site YPN_2207 IPR036249 YPN_2207 YPN_2208 IPR002541 Cytochrome c assembly protein YPN_2208 IPR003567 Cytochrome c-type biogenesis protein YPN_2208 IPR003568 Cytochrome c-type biogenesis protein CcmF YPN_2208 IPR032523 YPN_2208 YPN_2209 IPR004329 CcmE/CycJ protein YPN_2209 IPR036127 YPN_2209 YPN_2210 IPR007078 Haem exporter protein D (CcmD) YPN_2211 IPR002541 Cytochrome c assembly protein YPN_2211 IPR003557 Cytochrome c-type biogenesis protein CcmC YPN_2212 IPR003544 Cytochrome c-type biogenesis protein CcmB YPN_2212 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPN_2213 IPR003439 ABC transporter-like YPN_2213 IPR003593 AAA+ ATPase domain YPN_2213 IPR005895 ABC transporter, haem export, CcmA YPN_2213 IPR017871 ABC transporter, conserved site YPN_2213 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2215 IPR007156 LemA YPN_2215 IPR023353 LemA-like domain YPN_2216 IPR018702 Protein of unknown function DUF2207, membrane YPN_2217 IPR004624 PhnA protein YPN_2217 IPR013987 PhnA protein, N-terminal YPN_2217 IPR013988 PhnA protein, C-terminal YPN_2219 IPR007048 GpW/Gp25/anti-adapter protein IraD YPN_2220 IPR009211 Predicted virulence protein, SciE type YPN_2220 IPR011990 Tetratricopeptide-like helical domain YPN_2222 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPN_2222 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPN_2222 IPR037026 YPN_2222 YPN_2223 IPR009612 ImcF-related YPN_2223 IPR010623 Domain of unknown function DUF1215 YPN_2223 IPR017731 Type VI secretion system, IcmF YPN_2223 IPR025743 ImcF-related, N-terminal domain YPN_2223 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2224 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_2224 IPR017732 Type IV / VI secretion system, DotU YPN_2224 IPR017733 Type VI secretion system, OmpA/MotB domain YPN_2224 IPR036737 YPN_2224 YPN_2224 IPR038522 YPN_2224 YPN_2225 IPR001270 ClpA/B family YPN_2225 IPR002611 IstB-like ATP-binding protein YPN_2225 IPR003593 AAA+ ATPase domain YPN_2225 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2225 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_2226 IPR001584 Integrase, catalytic core YPN_2226 IPR006120 Resolvase, HTH domain YPN_2226 IPR009057 Homeodomain-like YPN_2226 IPR012337 Ribonuclease H-like domain YPN_2228 IPR008995 Molybdate/tungstate binding, C-terminal YPN_2228 IPR013611 Transport-associated OB, type 2 YPN_2229 IPR003439 ABC transporter-like YPN_2229 IPR003593 AAA+ ATPase domain YPN_2229 IPR017871 ABC transporter, conserved site YPN_2229 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2230 IPR000515 MetI-like domain YPN_2230 IPR035906 YPN_2230 YPN_2231 IPR000515 MetI-like domain YPN_2231 IPR035906 YPN_2231 YPN_2232 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_2233 IPR000683 Oxidoreductase, N-terminal YPN_2233 IPR036291 YPN_2233 YPN_2235 IPR000524 Transcription regulator HTH, GntR YPN_2235 IPR011663 UbiC transcription regulator-associated YPN_2235 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPN_2235 IPR036388 YPN_2235 YPN_2235 IPR036390 YPN_2235 YPN_2237 IPR001584 Integrase, catalytic core YPN_2240 IPR001207 Transposase, mutator type YPN_2241 IPR001207 Transposase, mutator type YPN_2242 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain YPN_2242 IPR035897 YPN_2242 YPN_2243 IPR025528 Protein of unknown function DUF4415 YPN_2244 IPR007460 Burkholderia phage Bups phi1, Orf7.3 YPN_2244 IPR038573 YPN_2244 YPN_2245 IPR006531 Gp5 N-terminal YPN_2245 IPR013046 Bacteriophage Mu/P2, baseplate assembly YPN_2245 IPR037026 YPN_2245 YPN_2246 IPR007048 GpW/Gp25/anti-adapter protein IraD YPN_2248 IPR021225 Protein of unknown function DUF2778 YPN_2250 IPR002514 Transposase IS3/IS911family YPN_2251 IPR001584 Integrase, catalytic core YPN_2251 IPR012337 Ribonuclease H-like domain YPN_2251 IPR036397 YPN_2251 YPN_2252 IPR008514 Type VI secretion system effector, Hcp YPN_2252 IPR036624 YPN_2252 YPN_2255 IPR007694 DNA helicase, DnaB-like, C-terminal YPN_2256 IPR010998 Integrase, Lambda-type, N-terminal YPN_2256 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_2256 IPR013762 Integrase-like, catalytic core YPN_2257 IPR000462 CDP-alcohol phosphatidyltransferase YPN_2257 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YPN_2257 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YPN_2258 IPR000305 GIY-YIG nuclease superfamily YPN_2258 IPR001162 UvrC family homology region YPN_2258 IPR001943 UVR domain YPN_2258 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPN_2258 IPR004791 UvrABC system, subunit C YPN_2258 IPR010994 RuvA domain 2-like YPN_2258 IPR035901 YPN_2258 YPN_2258 IPR036876 YPN_2258 YPN_2258 IPR038476 YPN_2258 YPN_2259 IPR000792 Transcription regulator LuxR, C-terminal YPN_2259 IPR001789 Signal transduction response regulator, receiver domain YPN_2259 IPR011006 CheY-like superfamily YPN_2259 IPR016032 Signal transduction response regulator, C-terminal effector YPN_2261 IPR009707 GlpM YPN_2263 IPR000758 Virulence-related outer membrane protein YPN_2263 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_2263 IPR027385 Outer membrane protein beta-barrel YPN_2264 IPR002293 Amino acid/polyamine transporter I YPN_2264 IPR004840 Amino acid permease, conserved site YPN_2264 IPR004841 Amino acid permease/ SLC12A domain YPN_2265 IPR006652 Kelch repeat type 1 YPN_2265 IPR015915 Kelch-type beta propeller YPN_2265 IPR019936 Mutatrotase, YjhT-like YPN_2266 IPR005025 NADPH-dependent FMN reductase-like YPN_2266 IPR010089 Flavoprotein WrbA YPN_2266 IPR029039 Flavoprotein-like YPN_2266 IPR037513 YPN_2266 YPN_2267 IPR006313 Deferrochelatase/peroxidase EfeB YPN_2267 IPR006314 Dyp-type peroxidase YPN_2267 IPR011008 Dimeric alpha-beta barrel YPN_2268 IPR008972 Cupredoxin YPN_2268 IPR018976 YPN_2268 YPN_2268 IPR028096 EfeO-type cupredoxin-like domain YPN_2268 IPR038352 YPN_2268 YPN_2269 IPR004923 Iron permease FTR1/Fip1/EfeU YPN_2270 IPR001734 Sodium/solute symporter YPN_2270 IPR011851 Sodium/proline symporter YPN_2270 IPR018212 Sodium/solute symporter, conserved site YPN_2270 IPR038377 YPN_2270 YPN_2272 IPR002872 Proline dehydrogenase domain YPN_2272 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YPN_2272 IPR010985 Ribbon-helix-helix YPN_2272 IPR013321 Arc-type ribbon-helix-helix YPN_2272 IPR015590 Aldehyde dehydrogenase domain YPN_2272 IPR016160 Aldehyde dehydrogenase, cysteine active site YPN_2272 IPR016161 Aldehyde/histidinol dehydrogenase YPN_2272 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_2272 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_2272 IPR024082 Proline dehydrogenase PutA, domain II YPN_2272 IPR024089 Proline dehydrogenase PutA, domain I/II YPN_2272 IPR024090 Proline dehydrogenase PutA, domain I YPN_2272 IPR025703 Bifunctional protein PutA YPN_2272 IPR029041 FAD-linked oxidoreductase-like YPN_2272 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPN_2274 IPR036388 YPN_2274 YPN_2274 IPR036390 YPN_2274 YPN_2275 IPR003439 ABC transporter-like YPN_2275 IPR003593 AAA+ ATPase domain YPN_2275 IPR017871 ABC transporter, conserved site YPN_2275 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2275 IPR030679 YPN_2275 YPN_2276 IPR000515 MetI-like domain YPN_2276 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_2276 IPR035906 YPN_2276 YPN_2277 IPR001320 Ionotropic glutamate receptor YPN_2277 IPR001638 Extracellular solute-binding protein, family 3 YPN_2277 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPN_2278 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_2278 IPR005966 D-cysteine desulfhydrase YPN_2278 IPR023702 D-cysteine desulphhydrase, bacterial YPN_2278 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPN_2278 IPR036052 YPN_2278 YPN_2279 IPR004107 Integrase, SAM-like, N-terminal YPN_2279 IPR022523 Flagellar regulator, FliZ YPN_2280 IPR000943 RNA polymerase sigma-70 YPN_2280 IPR007624 RNA polymerase sigma-70 region 3 YPN_2280 IPR007627 RNA polymerase sigma-70 region 2 YPN_2280 IPR007630 RNA polymerase sigma-70 region 4 YPN_2280 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPN_2280 IPR013324 RNA polymerase sigma factor, region 3/4 YPN_2280 IPR013325 RNA polymerase sigma factor, region 2 YPN_2280 IPR014284 RNA polymerase sigma-70 like domain YPN_2280 IPR028617 RNA polymerase sigma factor FliA YPN_2281 IPR001029 Flagellin, D0/D1 domain YPN_2281 IPR001492 Flagellin YPN_2282 IPR003481 Flagellar hook-associated protein 2, N-terminal YPN_2282 IPR010809 Flagellar hook-associated 2, C-terminal YPN_2282 IPR010810 Flagellin hook, IN motif YPN_2283 IPR003713 Flagellar protein FliS YPN_2283 IPR036584 YPN_2283 YPN_2284 IPR008622 Flagellar protein FliT YPN_2285 IPR009057 Homeodomain-like YPN_2285 IPR018060 DNA binding HTH domain, AraC-type YPN_2285 IPR020449 Transcription regulator HTH, AraC- type YPN_2285 IPR037923 YPN_2285 YPN_2287 IPR029016 GAF domain-like YPN_2289 IPR003265 HhH-GPD domain YPN_2289 IPR011257 DNA glycosylase YPN_2290 IPR003812 Fido domain YPN_2290 IPR006440 Death on curing protein YPN_2292 IPR001624 Flagellar hook-basal body complex protein FliE YPN_2293 IPR000067 Flagellar M-ring protein FliF YPN_2293 IPR006182 Secretory protein YscJ/FliF YPN_2293 IPR013556 Flagellar M-ring C-terminal YPN_2294 IPR000090 Flagellar motor switch protein FliG YPN_2294 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPN_2294 IPR023087 YPN_2294 YPN_2294 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPN_2294 IPR032779 YPN_2294 YPN_2295 IPR000563 Flagellar assembly protein FliH YPN_2295 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPN_2296 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPN_2296 IPR003593 AAA+ ATPase domain YPN_2296 IPR005714 ATPase, type III secretion system, FliI/YscN YPN_2296 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPN_2296 IPR020005 Flagellar export ATPase FliI, clade 1 YPN_2296 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2297 IPR012823 Flagellar export FliJ YPN_2297 IPR018006 Flagellar FliJ, proteobacteria YPN_2298 IPR001635 Flagellar hook-length control protein FliK YPN_2298 IPR021136 Flagellar hook-length control protein-like, C-terminal YPN_2298 IPR038610 YPN_2298 YPN_2299 IPR005503 Flagellar basal body-associated protein FliL YPN_2300 IPR001543 Surface presentation of antigen (SpoA) YPN_2300 IPR001689 Flagellar motor switch protein FliM YPN_2300 IPR028976 CheC-like domain YPN_2300 IPR036429 YPN_2300 YPN_2301 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPN_2301 IPR001543 Surface presentation of antigen (SpoA) YPN_2301 IPR012826 Flagellar motor switch FliN YPN_2301 IPR031576 YPN_2301 YPN_2301 IPR036429 YPN_2301 YPN_2302 IPR022781 Flagellar biosynthesis protein, FliO YPN_2303 IPR005837 Flagellar transport protein FliP YPN_2303 IPR005838 Type III secretion system inner membrane P protein YPN_2304 IPR002191 Bacterial export protein family 3 YPN_2304 IPR006305 Flagellar biosynthesis protein FliQ YPN_2305 IPR002010 Type III secretion system inner membrane R protein YPN_2305 IPR006303 Flagellar biosynthesis protein FliR YPN_2306 IPR012933 HicA mRNA interferase family YPN_2306 IPR038570 YPN_2306 YPN_2307 IPR031807 YPN_2307 YPN_2307 IPR035069 YPN_2307 YPN_2308 IPR011611 Carbohydrate kinase PfkB YPN_2308 IPR029056 Ribokinase-like YPN_2309 IPR001851 ABC transporter, permease YPN_2310 IPR003439 ABC transporter-like YPN_2310 IPR003593 AAA+ ATPase domain YPN_2310 IPR017871 ABC transporter, conserved site YPN_2310 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2311 IPR025997 Periplasmic binding protein domain YPN_2311 IPR028082 Periplasmic binding protein-like I YPN_2312 IPR001851 ABC transporter, permease YPN_2313 IPR001303 Class II aldolase/adducin N-terminal YPN_2313 IPR002347 Glucose/ribitol dehydrogenase YPN_2313 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_2313 IPR036291 YPN_2313 YPN_2313 IPR036409 YPN_2313 YPN_2314 IPR007324 Sugar-binding domain, putative YPN_2314 IPR013324 RNA polymerase sigma factor, region 3/4 YPN_2314 IPR037171 YPN_2314 YPN_2315 IPR001029 Flagellin, D0/D1 domain YPN_2315 IPR013384 Flagellar hook-associated protein 3 YPN_2316 IPR001444 Flagellar basal body rod protein, N-terminal YPN_2316 IPR002371 Flagellar hook-associated protein, FlgK YPN_2316 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_2317 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YPN_2317 IPR013377 Flagellar rod assembly protein/muramidase FlgJ YPN_2317 IPR019301 Flagellar protein FlgJ, N-terminal YPN_2318 IPR001782 Flagellar P-ring protein YPN_2319 IPR000527 Flagellar L-ring protein YPN_2320 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_2320 IPR012834 Flagellar basal-body rod FlgG YPN_2320 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPN_2320 IPR037925 YPN_2320 YPN_2321 IPR001444 Flagellar basal body rod protein, N-terminal YPN_2321 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPN_2321 IPR037925 YPN_2321 YPN_2322 IPR001444 Flagellar basal body rod protein, N-terminal YPN_2322 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_2322 IPR011491 Flagellar basal body FlaE YPN_2322 IPR019776 Flagellar basal body rod protein, conserved site YPN_2322 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPN_2322 IPR037058 YPN_2322 YPN_2322 IPR037925 YPN_2322 YPN_2323 IPR005648 Flagellar hook capping protein YPN_2323 IPR025963 FlgD Tudor-like domain YPN_2323 IPR025965 FlgD Ig-like domain YPN_2324 IPR001444 Flagellar basal body rod protein, N-terminal YPN_2324 IPR006299 Flagellar basal-body rod protein FlgC YPN_2324 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPN_2324 IPR019776 Flagellar basal body rod protein, conserved site YPN_2325 IPR001444 Flagellar basal body rod protein, N-terminal YPN_2325 IPR006300 Flagellar basal-body rod protein FlgB YPN_2325 IPR019776 Flagellar basal body rod protein, conserved site YPN_2326 IPR013974 SAF domain YPN_2326 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPN_2327 IPR007412 Anti-sigma-28 factor, FlgM YPN_2327 IPR031316 YPN_2327 YPN_2327 IPR035890 YPN_2327 YPN_2328 IPR007809 FlgN-like domain YPN_2328 IPR036679 YPN_2328 YPN_2329 IPR003344 Bacterial Ig-like, group 1 YPN_2329 IPR008964 Invasin/intimin cell-adhesion YPN_2329 IPR013117 Intimin, C-terminal YPN_2329 IPR013783 Immunoglobulin-like fold YPN_2329 IPR015217 Invasin, domain 3 YPN_2329 IPR016186 C-type lectin-like YPN_2329 IPR016187 C-type lectin fold YPN_2329 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPN_2329 IPR038177 YPN_2329 YPN_2330 IPR002686 Transposase IS200-like YPN_2330 IPR036515 YPN_2330 YPN_2331 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPN_2331 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPN_2331 IPR038177 YPN_2331 YPN_2332 IPR009420 Flagellar FlhE YPN_2333 IPR001712 Type III secretion system FHIPEP YPN_2333 IPR006301 Flagellar biosynthesis protein FlhA YPN_2333 IPR025505 FHIPEP conserved site YPN_2334 IPR006135 Type III secretion system substrate exporter YPN_2334 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YPN_2334 IPR029025 Type III secretion system substrate exporter, C-terminal YPN_2336 IPR010862 Protein of unknown function DUF1493 YPN_2337 IPR019648 Protein of unknown function DUF2511 YPN_2338 IPR008457 Copper resistance D YPN_2339 IPR007348 CopC domain YPN_2339 IPR014756 Immunoglobulin E-set YPN_2340 IPR008331 Ferritin/DPS protein domain YPN_2340 IPR009078 Ferritin-like superfamily YPN_2340 IPR012347 Ferritin-related YPN_2341 IPR009052 DNA polymerase III-theta, bacterial YPN_2341 IPR036745 YPN_2341 YPN_2342 IPR000073 Alpha/beta hydrolase fold-1 YPN_2342 IPR002410 Peptidase S33 YPN_2342 IPR005944 Proline iminopeptidase YPN_2342 IPR029058 Alpha/Beta hydrolase fold YPN_2343 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPN_2343 IPR002470 Peptidase S9A, prolyl oligopeptidase YPN_2343 IPR023302 Peptidase S9A, N-terminal domain YPN_2343 IPR029058 Alpha/Beta hydrolase fold YPN_2344 IPR020236 Uncharacterised protein family YebF YPN_2344 IPR025603 YebF/Colicin-M immunity protein YPN_2344 IPR038703 YPN_2344 YPN_2345 IPR007374 ASCH domain YPN_2345 IPR008314 Uncharacterised conserved protein UCP029143 YPN_2345 IPR015947 PUA-like domain YPN_2346 IPR009813 Uncharacterised protein family YebG YPN_2346 IPR038627 YPN_2346 YPN_2347 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPN_2347 IPR001650 Helicase, C-terminal YPN_2347 IPR005580 DbpA, RNA-binding YPN_2347 IPR011545 DEAD/DEAH box helicase domain YPN_2347 IPR012677 Nucleotide-binding, alpha-beta plait YPN_2347 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_2347 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2347 IPR028619 ATP-dependent RNA helicase DbpA YPN_2348 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPN_2348 IPR005862 Phosphoribosylglycinamide formyltransferase 2 YPN_2348 IPR011054 Rudiment single hybrid motif YPN_2348 IPR013815 ATP-grasp fold, subdomain 1 YPN_2348 IPR016185 Pre-ATP-grasp domain YPN_2349 IPR005371 Uncharacterised protein family UPF0181 YPN_2350 IPR005801 ADC synthase YPN_2350 IPR005802 Para-aminobenzoate synthase, component I YPN_2350 IPR006805 Anthranilate synthase component I, N-terminal YPN_2350 IPR015890 Chorismate binding, C-terminal YPN_2350 IPR019999 Anthranilate synthase component I - like YPN_2351 IPR000059 NUDIX hydrolase, NudL, conserved site YPN_2351 IPR000086 NUDIX hydrolase domain YPN_2351 IPR015797 NUDIX hydrolase domain-like YPN_2351 IPR023735 Uncharacterised nudix hydrolase NudL YPN_2352 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YPN_2352 IPR005130 Serine dehydratase-like, alpha subunit YPN_2352 IPR005131 Serine dehydratase beta chain YPN_2352 IPR029009 Allosteric substrate binding domain YPN_2353 IPR002563 Flavin reductase-like, FMN-binding YPN_2353 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component YPN_2353 IPR012349 FMN-binding split barrel YPN_2354 IPR004925 HpaB/PvcC/4-BUDH YPN_2354 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPN_2354 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YPN_2354 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPN_2354 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPN_2354 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPN_2354 IPR036250 YPN_2354 YPN_2355 IPR011701 Major facilitator superfamily YPN_2355 IPR012707 4-hydroxyphenylacetate permease YPN_2355 IPR024671 Autophagy-related protein 22-like YPN_2355 IPR036259 YPN_2355 YPN_2356 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPN_2356 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YPN_2356 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_2357 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YPN_2357 IPR036663 YPN_2357 YPN_2358 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YPN_2358 IPR014347 Tautomerase/MIF superfamily YPN_2359 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPN_2359 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe YPN_2360 IPR015590 Aldehyde dehydrogenase domain YPN_2360 IPR016160 Aldehyde dehydrogenase, cysteine active site YPN_2360 IPR016161 Aldehyde/histidinol dehydrogenase YPN_2360 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_2360 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_2360 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPN_2361 IPR011234 Fumarylacetoacetase, C-terminal-related YPN_2361 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPN_2361 IPR036663 YPN_2361 YPN_2362 IPR011234 Fumarylacetoacetase, C-terminal-related YPN_2362 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPN_2362 IPR036663 YPN_2362 YPN_2363 IPR000835 MarR-type HTH domain YPN_2363 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR YPN_2363 IPR036388 YPN_2363 YPN_2363 IPR036390 YPN_2363 YPN_2364 IPR000644 CBS domain YPN_2364 IPR005170 Transporter-associated domain YPN_2364 IPR005496 Integral membrane protein TerC YPN_2364 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_2364 IPR036318 YPN_2364 YPN_2365 IPR004701 Phosphotransferase system, mannose-type IIA component YPN_2365 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPN_2365 IPR013789 Phosphotransferase system, mannose family IIA component YPN_2365 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPN_2365 IPR036662 YPN_2365 YPN_2365 IPR036667 YPN_2365 YPN_2366 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YPN_2367 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPN_2368 IPR009328 Protein of unknown function DUF986 YPN_2369 IPR003810 Domain of unknown function DUF204 YPN_2369 IPR022929 Putative manganese efflux pump MntP YPN_2370 IPR000531 TonB-dependent receptor, beta-barrel YPN_2370 IPR010105 TonB-dependent siderophore receptor YPN_2370 IPR010917 TonB-dependent receptor, conserved site YPN_2370 IPR012910 TonB-dependent receptor, plug YPN_2370 IPR036942 YPN_2370 YPN_2370 IPR037066 YPN_2370 YPN_2371 IPR000014 PAS domain YPN_2371 IPR035965 YPN_2371 YPN_2372 IPR000014 PAS domain YPN_2372 IPR000160 GGDEF domain YPN_2372 IPR001610 PAC motif YPN_2372 IPR013767 PAS fold YPN_2372 IPR029787 Nucleotide cyclase YPN_2372 IPR035965 YPN_2372 YPN_2374 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YPN_2374 IPR025714 Methyltransferase domain YPN_2374 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2375 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPN_2375 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPN_2375 IPR038371 YPN_2375 YPN_2376 IPR002059 Cold-shock protein, DNA-binding YPN_2376 IPR011129 Cold shock protein YPN_2376 IPR012156 Cold shock, CspA YPN_2376 IPR012340 Nucleic acid-binding, OB-fold YPN_2376 IPR019844 Cold-shock conserved site YPN_2377 IPR019672 Protein of unknown function DUF2627 YPN_2378 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YPN_2378 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_2379 IPR002293 Amino acid/polyamine transporter I YPN_2379 IPR004840 Amino acid permease, conserved site YPN_2379 IPR004841 Amino acid permease/ SLC12A domain YPN_2380 IPR025135 Protein of unknown function DUF4060 YPN_2381 IPR019701 Bacteriophage P22, NinX YPN_2382 IPR025594 YebO-like protein YPN_2383 IPR025611 YobH-like protein YPN_2384 IPR020262 Uncharacterised protein family YecJ YPN_2385 IPR009057 Homeodomain-like YPN_2385 IPR018060 DNA binding HTH domain, AraC-type YPN_2385 IPR020449 Transcription regulator HTH, AraC- type YPN_2387 IPR003439 ABC transporter-like YPN_2387 IPR003593 AAA+ ATPase domain YPN_2387 IPR011527 ABC transporter type 1, transmembrane domain YPN_2387 IPR017871 ABC transporter, conserved site YPN_2387 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2387 IPR036640 YPN_2387 YPN_2388 IPR000687 RIO kinase YPN_2388 IPR011009 Protein kinase-like domain YPN_2388 IPR018935 RIO kinase, conserved site YPN_2389 IPR005545 YCII-related YPN_2389 IPR011008 Dimeric alpha-beta barrel YPN_2390 IPR010384 MtfA family YPN_2390 IPR024079 Metallopeptidase, catalytic domain YPN_2392 IPR002611 IstB-like ATP-binding protein YPN_2392 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2393 IPR002611 IstB-like ATP-binding protein YPN_2393 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2394 IPR001584 Integrase, catalytic core YPN_2394 IPR006120 Resolvase, HTH domain YPN_2394 IPR009057 Homeodomain-like YPN_2394 IPR012337 Ribonuclease H-like domain YPN_2395 IPR000843 Transcription regulator HTH, LacI YPN_2395 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPN_2395 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2395 IPR028082 Periplasmic binding protein-like I YPN_2396 IPR001207 Transposase, mutator type YPN_2397 IPR000576 LacY/RafB permease family YPN_2397 IPR036259 YPN_2397 YPN_2398 IPR000111 Glycoside hydrolase, clan GH-D YPN_2398 IPR002252 Glycoside hydrolase, family 36 YPN_2398 IPR013785 Aldolase-type TIM barrel YPN_2398 IPR017853 Glycoside hydrolase, superfamily YPN_2398 IPR031704 YPN_2398 YPN_2398 IPR038417 YPN_2398 YPN_2400 IPR003542 Enterobactin synthetase-like, component D YPN_2400 IPR008278 4'-phosphopantetheinyl transferase superfamily YPN_2400 IPR037143 YPN_2400 YPN_2401 IPR004682 TRAP dicarboxylate transporter YPN_2401 IPR018389 Bacterial extracellular solute-binding protein, family 7 YPN_2401 IPR038404 YPN_2401 YPN_2402 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component YPN_2403 IPR004681 TRAP transporter permease protein YPN_2403 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPN_2404 IPR000792 Transcription regulator LuxR, C-terminal YPN_2404 IPR001789 Signal transduction response regulator, receiver domain YPN_2404 IPR011006 CheY-like superfamily YPN_2404 IPR016032 Signal transduction response regulator, C-terminal effector YPN_2405 IPR018636 Protein of unknown function DUF2058 YPN_2407 IPR002509 Polysaccharide deacetylase YPN_2407 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_2408 IPR005829 Sugar transporter, conserved site YPN_2408 IPR011701 Major facilitator superfamily YPN_2408 IPR036259 YPN_2408 YPN_2409 IPR002528 Multi antimicrobial extrusion protein YPN_2410 IPR001518 Argininosuccinate synthase YPN_2410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_2410 IPR018223 Argininosuccinate synthase, conserved site YPN_2410 IPR023437 Argininosuccinate synthase, type 2 subfamily YPN_2410 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail YPN_2410 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body YPN_2411 IPR000262 FMN-dependent dehydrogenase YPN_2411 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YPN_2411 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YPN_2411 IPR013785 Aldolase-type TIM barrel YPN_2411 IPR020920 L-lactate dehydrogenase, bacterial YPN_2412 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPN_2412 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPN_2412 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPN_2412 IPR029017 Enolase N-terminal domain-like YPN_2412 IPR029065 Enolase C-terminal domain-like YPN_2412 IPR036849 YPN_2412 YPN_2413 IPR011234 Fumarylacetoacetase, C-terminal-related YPN_2413 IPR036663 YPN_2413 YPN_2414 IPR002347 Glucose/ribitol dehydrogenase YPN_2414 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_2414 IPR036291 YPN_2414 YPN_2415 IPR007263 Protein of unknown function DUF393 YPN_2416 IPR011701 Major facilitator superfamily YPN_2416 IPR036259 YPN_2416 YPN_2418 IPR003344 Bacterial Ig-like, group 1 YPN_2418 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPN_2418 IPR008964 Invasin/intimin cell-adhesion YPN_2418 IPR013783 Immunoglobulin-like fold YPN_2418 IPR015217 Invasin, domain 3 YPN_2418 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPN_2418 IPR038177 YPN_2418 YPN_2419 IPR001207 Transposase, mutator type YPN_2420 IPR007458 Protein of unknown function DUF496 YPN_2421 IPR013120 Male sterility, NAD-binding YPN_2421 IPR036291 YPN_2421 YPN_2422 IPR012337 Ribonuclease H-like domain YPN_2422 IPR013520 Exonuclease, RNase T/DNA polymerase III YPN_2422 IPR013620 Exonuclease C-terminal YPN_2422 IPR023607 Exodeoxyribonuclease I YPN_2422 IPR036397 YPN_2422 YPN_2422 IPR038649 YPN_2422 YPN_2423 IPR002293 Amino acid/polyamine transporter I YPN_2424 IPR001670 Alcohol dehydrogenase, iron-type YPN_2424 IPR016205 Glycerol dehydrogenase YPN_2424 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPN_2425 IPR003439 ABC transporter-like YPN_2425 IPR003593 AAA+ ATPase domain YPN_2425 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2426 IPR003439 ABC transporter-like YPN_2426 IPR003593 AAA+ ATPase domain YPN_2426 IPR017871 ABC transporter, conserved site YPN_2426 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2427 IPR001851 ABC transporter, permease YPN_2428 IPR032032 YPN_2428 YPN_2428 IPR038314 YPN_2428 YPN_2429 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_2429 IPR036291 YPN_2429 YPN_2430 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPN_2430 IPR013115 Histidine biosynthesis HisG, C-terminal YPN_2430 IPR013820 ATP phosphoribosyltransferase, catalytic domain YPN_2430 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPN_2430 IPR018198 ATP phosphoribosyltransferase, conserved site YPN_2430 IPR020621 ATP phosphoribosyltransferase HisG, long form YPN_2431 IPR001692 Histidinol dehydrogenase, conserved site YPN_2431 IPR012131 Histidinol dehydrogenase YPN_2431 IPR016161 Aldehyde/histidinol dehydrogenase YPN_2431 IPR022695 Histidinol dehydrogenase, monofunctional YPN_2432 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPN_2432 IPR004839 Aminotransferase, class I/classII YPN_2432 IPR005861 Histidinol-phosphate aminotransferase family YPN_2432 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2432 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2432 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2433 IPR000807 Imidazoleglycerol-phosphate dehydratase YPN_2433 IPR005954 Histidinol-phosphatase YPN_2433 IPR006543 Histidinol-phosphate phosphatase YPN_2433 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPN_2433 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YPN_2433 IPR020566 Histidine biosynthesis bifunctional protein HisB YPN_2433 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_2433 IPR023214 HAD-like domain YPN_2433 IPR036412 YPN_2433 YPN_2433 IPR038494 YPN_2433 YPN_2435 IPR010139 Imidazole glycerol phosphate synthase, subunit H YPN_2435 IPR017926 Glutamine amidotransferase YPN_2435 IPR029062 Class I glutamine amidotransferase-like YPN_2436 IPR006062 Histidine biosynthesis YPN_2436 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YPN_2436 IPR011060 Ribulose-phosphate binding barrel YPN_2436 IPR013785 Aldolase-type TIM barrel YPN_2436 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YPN_2437 IPR004651 Histidine biosynthesis, HisF YPN_2437 IPR006062 Histidine biosynthesis YPN_2437 IPR011060 Ribulose-phosphate binding barrel YPN_2437 IPR013785 Aldolase-type TIM barrel YPN_2438 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YPN_2438 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YPN_2438 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YPN_2438 IPR023019 Histidine biosynthesis bifunctional protein HisIE YPN_2438 IPR038019 YPN_2438 YPN_2439 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YPN_2439 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YPN_2439 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPN_2439 IPR006183 YPN_2439 YPN_2439 IPR006184 6-phosphogluconate-binding site YPN_2439 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_2439 IPR013328 Dehydrogenase, multihelical YPN_2439 IPR036291 YPN_2439 YPN_2440 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPN_2440 IPR005835 Nucleotidyl transferase YPN_2440 IPR029044 Nucleotide-diphospho-sugar transferases YPN_2441 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPN_2441 IPR005835 Nucleotidyl transferase YPN_2441 IPR029044 Nucleotide-diphospho-sugar transferases YPN_2442 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPN_2442 IPR022770 Ferric iron reductase FhuF domain YPN_2443 IPR000531 TonB-dependent receptor, beta-barrel YPN_2443 IPR010105 TonB-dependent siderophore receptor YPN_2443 IPR010917 TonB-dependent receptor, conserved site YPN_2443 IPR012910 TonB-dependent receptor, plug YPN_2443 IPR036942 YPN_2443 YPN_2443 IPR037066 YPN_2443 YPN_2444 IPR002491 ABC transporter periplasmic binding domain YPN_2445 IPR000522 ABC transporter, permease protein YPN_2445 IPR037294 YPN_2445 YPN_2446 IPR000522 ABC transporter, permease protein YPN_2446 IPR037294 YPN_2446 YPN_2447 IPR003439 ABC transporter-like YPN_2447 IPR003593 AAA+ ATPase domain YPN_2447 IPR017871 ABC transporter, conserved site YPN_2447 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2448 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPN_2448 IPR022770 Ferric iron reductase FhuF domain YPN_2449 IPR016181 Acyl-CoA N-acyltransferase YPN_2449 IPR019432 Siderophore biosynthesis protein, conserved domain YPN_2450 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPN_2450 IPR036188 YPN_2450 YPN_2451 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPN_2451 IPR010977 Aromatic-L-amino-acid decarboxylase YPN_2451 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2451 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2451 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2452 IPR008090 Ferric iron reductase YPN_2452 IPR022770 Ferric iron reductase FhuF domain YPN_2452 IPR024726 Ferric iron reductase, C-terminal YPN_2453 IPR000644 CBS domain YPN_2453 IPR005170 Transporter-associated domain YPN_2453 IPR005496 Integral membrane protein TerC YPN_2453 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_2453 IPR036318 YPN_2453 YPN_2454 IPR007844 AsmA YPN_2454 IPR032712 YPN_2454 YPN_2455 IPR011962 Deoxycytidine triphosphate deaminase YPN_2455 IPR029054 dUTPase-like YPN_2455 IPR036157 YPN_2455 YPN_2456 IPR000764 Uridine kinase like YPN_2456 IPR006083 Phosphoribulokinase/uridine kinase YPN_2456 IPR026008 Uridine kinase YPN_2456 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2457 IPR000808 Mrp, conserved site YPN_2457 IPR019591 Mrp/NBP35 ATP-binding protein YPN_2457 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2457 IPR033756 YPN_2457 YPN_2457 IPR034904 YPN_2457 YPN_2458 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_2458 IPR002547 tRNA-binding domain YPN_2458 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal YPN_2458 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPN_2458 IPR012340 Nucleic acid-binding, OB-fold YPN_2458 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_2458 IPR014758 Methionyl-tRNA synthetase YPN_2458 IPR015413 Methionyl/Leucyl tRNA synthetase YPN_2458 IPR023458 Methionine-tRNA ligase, type 1 YPN_2458 IPR029038 Methionyl-tRNA synthetase, Zn-domain YPN_2458 IPR033911 YPN_2458 YPN_2459 IPR002686 Transposase IS200-like YPN_2459 IPR036515 YPN_2459 YPN_2461 IPR025997 Periplasmic binding protein domain YPN_2461 IPR028082 Periplasmic binding protein-like I YPN_2462 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YPN_2462 IPR013211 LVIVD YPN_2463 IPR002686 Transposase IS200-like YPN_2463 IPR036515 YPN_2463 YPN_2464 IPR011701 Major facilitator superfamily YPN_2464 IPR036259 YPN_2464 YPN_2465 IPR005538 LrgA/CidA family YPN_2465 IPR022957 Uncharacterised protein family UPF0299 YPN_2466 IPR005261 Conserved hypothetical protein CHP00659 YPN_2466 IPR007300 CidB/LrgB family YPN_2467 IPR002125 CMP/dCMP deaminase, zinc-binding YPN_2467 IPR006263 Cytidine deaminase, homodimeric YPN_2467 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YPN_2467 IPR016192 APOBEC/CMP deaminase, zinc-binding YPN_2467 IPR016193 Cytidine deaminase-like YPN_2467 IPR020797 Cytidine deaminase, bacteria YPN_2468 IPR001891 Malic oxidoreductase YPN_2468 IPR012301 Malic enzyme, N-terminal domain YPN_2468 IPR012302 Malic enzyme, NAD-binding YPN_2468 IPR015884 Malic enzyme, conserved site YPN_2468 IPR023667 NAD-dependent malic enzyme, proteobacteria YPN_2468 IPR036291 YPN_2468 YPN_2468 IPR037062 YPN_2468 YPN_2469 IPR003848 Domain of unknown function DUF218 YPN_2469 IPR023604 Uncharacterised protein family SanA YPN_2470 IPR001851 ABC transporter, permease YPN_2471 IPR003439 ABC transporter-like YPN_2471 IPR003593 AAA+ ATPase domain YPN_2471 IPR017871 ABC transporter, conserved site YPN_2471 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2472 IPR025997 Periplasmic binding protein domain YPN_2472 IPR028082 Periplasmic binding protein-like I YPN_2473 IPR007349 Domain of unknown function DUF418 YPN_2474 IPR001474 GTP cyclohydrolase I YPN_2474 IPR018234 GTP cyclohydrolase I, conserved site YPN_2474 IPR020602 GTP cyclohydrolase I domain YPN_2475 IPR010645 Domain of unknown function DUF1228 YPN_2475 IPR036259 YPN_2475 YPN_2476 IPR000847 Transcription regulator HTH, LysR YPN_2476 IPR005119 LysR, substrate-binding YPN_2476 IPR036388 YPN_2476 YPN_2476 IPR036390 YPN_2476 YPN_2477 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPN_2477 IPR011032 GroES (chaperonin 10)-like YPN_2477 IPR013149 Alcohol dehydrogenase, C-terminal YPN_2477 IPR013154 Alcohol dehydrogenase GroES-like YPN_2477 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase YPN_2477 IPR020843 Polyketide synthase, enoylreductase YPN_2477 IPR036291 YPN_2477 YPN_2478 IPR000801 Putative esterase YPN_2478 IPR014186 S-formylglutathione hydrolase YPN_2478 IPR029058 Alpha/Beta hydrolase fold YPN_2481 IPR003439 ABC transporter-like YPN_2481 IPR003593 AAA+ ATPase domain YPN_2481 IPR017871 ABC transporter, conserved site YPN_2481 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2482 IPR007197 Radical SAM YPN_2482 IPR013785 Aldolase-type TIM barrel YPN_2482 IPR023885 4Fe4S-binding SPASM domain YPN_2483 IPR001453 Molybdopterin binding domain YPN_2483 IPR005110 MoeA, N-terminal and linker domain YPN_2483 IPR005111 MoeA, C-terminal, domain IV YPN_2483 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPN_2483 IPR036135 YPN_2483 YPN_2483 IPR036425 YPN_2483 YPN_2483 IPR036688 YPN_2483 YPN_2484 IPR000594 UBA/THIF-type NAD/FAD binding fold YPN_2484 IPR012730 Molybdopterin synthase sulfurylase MoeB YPN_2484 IPR035985 YPN_2484 YPN_2485 IPR001207 Transposase, mutator type YPN_2486 IPR031829 YPN_2486 YPN_2487 IPR003439 ABC transporter-like YPN_2487 IPR003593 AAA+ ATPase domain YPN_2487 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2487 IPR032781 YPN_2487 YPN_2488 IPR031829 YPN_2488 YPN_2488 IPR038334 YPN_2488 YPN_2489 IPR010657 ImpA, N-terminal YPN_2489 IPR021069 ImpA, C-terminal YPN_2490 IPR007048 GpW/Gp25/anti-adapter protein IraD YPN_2490 IPR017737 Type VI secretion system, lysozyme-related protein YPN_2491 IPR017734 Type VI secretion system, lipoprotein SciN YPN_2491 IPR038706 YPN_2491 YPN_2492 IPR010732 Protein of unknown function DUF1305 YPN_2493 IPR010272 Type VI secretion system, VCA0110 YPN_2495 IPR008727 PAAR motif YPN_2495 IPR028946 Putative toxin 60 YPN_2496 IPR010657 ImpA, N-terminal YPN_2496 IPR017739 Type VI secretion system-associated, VCA0119 YPN_2497 IPR009612 ImcF-related YPN_2497 IPR010623 Domain of unknown function DUF1215 YPN_2503 IPR011055 Duplicated hybrid motif YPN_2503 IPR016047 Peptidase M23 YPN_2503 IPR023346 Lysozyme-like domain YPN_2504 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPN_2506 IPR011055 Duplicated hybrid motif YPN_2506 IPR016047 Peptidase M23 YPN_2506 IPR023346 Lysozyme-like domain YPN_2507 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPN_2507 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPN_2507 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPN_2507 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPN_2507 IPR037026 YPN_2507 YPN_2508 IPR001270 ClpA/B family YPN_2508 IPR003593 AAA+ ATPase domain YPN_2508 IPR003959 ATPase, AAA-type, core YPN_2508 IPR017729 Type VI secretion system, ATPase ClpV1 YPN_2508 IPR018368 ClpA/B, conserved site 1 YPN_2508 IPR019489 Clp ATPase, C-terminal YPN_2508 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2508 IPR036628 YPN_2508 YPN_2509 IPR008514 Type VI secretion system effector, Hcp YPN_2509 IPR036624 YPN_2509 YPN_2510 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_2510 IPR036737 YPN_2510 YPN_2511 IPR017732 Type IV / VI secretion system, DotU YPN_2511 IPR038522 YPN_2511 YPN_2512 IPR010263 Protein of unknown function DUF876 YPN_2513 IPR010269 Protein of unknown function DUF877 YPN_2514 IPR008312 Uncharacterised conserved protein UCP028301 YPN_2515 IPR001227 Acyl transferase domain YPN_2515 IPR014043 Acyl transferase YPN_2515 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPN_2515 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPN_2515 IPR020801 Polyketide synthase, acyl transferase domain YPN_2515 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPN_2516 IPR009081 Acyl carrier protein-like YPN_2516 IPR036736 YPN_2516 YPN_2517 IPR024311 Lipocalin-like domain YPN_2518 IPR002347 Glucose/ribitol dehydrogenase YPN_2518 IPR036291 YPN_2518 YPN_2519 IPR001753 Crotonase superfamily YPN_2519 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPN_2519 IPR029045 ClpP/crotonase-like domain YPN_2520 IPR001753 Crotonase superfamily YPN_2520 IPR029045 ClpP/crotonase-like domain YPN_2521 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YPN_2521 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YPN_2521 IPR016039 Thiolase-like YPN_2522 IPR002347 Glucose/ribitol dehydrogenase YPN_2522 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_2522 IPR036291 YPN_2522 YPN_2523 IPR014030 Beta-ketoacyl synthase, N-terminal YPN_2523 IPR014031 Beta-ketoacyl synthase, C-terminal YPN_2523 IPR016039 Thiolase-like YPN_2523 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPN_2524 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPN_2524 IPR029069 HotDog domain YPN_2526 IPR002347 Glucose/ribitol dehydrogenase YPN_2526 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_2526 IPR036291 YPN_2526 YPN_2527 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YPN_2527 IPR006094 FAD linked oxidase, N-terminal YPN_2527 IPR016167 FAD-binding, type 2, subdomain 1 YPN_2527 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_2527 IPR016181 Acyl-CoA N-acyltransferase YPN_2527 IPR036318 YPN_2527 YPN_2527 IPR038740 YPN_2527 YPN_2531 IPR012337 Ribonuclease H-like domain YPN_2531 IPR032874 YPN_2531 YPN_2532 IPR007453 Sulphur transfer protein DsrC/TusE YPN_2532 IPR025526 DsrC-like domain YPN_2533 IPR001792 Acylphosphatase-like domain YPN_2533 IPR017968 Acylphosphatase, conserved site YPN_2533 IPR020456 Acylphosphatase YPN_2533 IPR028627 Acylphosphatase, bacteria YPN_2533 IPR036046 YPN_2533 YPN_2534 IPR002478 PUA domain YPN_2534 IPR015947 PUA-like domain YPN_2534 IPR019614 S-adenosylmethionine-dependent methyltransferase YPN_2534 IPR023542 rRNA large subunit methyltransferase I YPN_2534 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2534 IPR036974 YPN_2534 YPN_2535 IPR011722 Hemimethylated DNA-binding domain YPN_2535 IPR022866 Heat shock protein HspQ YPN_2535 IPR036623 YPN_2535 YPN_2536 IPR003781 CoA-binding YPN_2536 IPR036291 YPN_2536 YPN_2537 IPR018635 Uncharacterised protein family UPF0319 YPN_2538 IPR004363 Methylglyoxal synthase YPN_2538 IPR011607 Methylglyoxal synthase-like domain YPN_2538 IPR018148 Methylglyoxal synthase, active site YPN_2538 IPR036914 YPN_2538 YPN_2539 IPR014017 DNA helicase, UvrD-like, C-terminal YPN_2539 IPR022161 DNA helicase IV, N-terminal domain YPN_2539 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2539 IPR034739 YPN_2539 YPN_2540 IPR005185 Protein of unknown function DUF307 YPN_2540 IPR031308 YPN_2540 YPN_2541 IPR010019 Integral membrane protein, YccS YPN_2541 IPR010020 Integral membrane protein, YccS/YhfK YPN_2541 IPR032692 YPN_2541 YPN_2542 IPR007076 TfoX, N-terminal YPN_2542 IPR007077 TfoX, C-terminal YPN_2542 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPN_2543 IPR004596 Cell division suppressor protein, SulA YPN_2543 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2544 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain YPN_2544 IPR002368 Outer membrane protein, OmpA YPN_2544 IPR006664 Outer membrane protein, bacterial YPN_2544 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_2544 IPR006690 Outer membrane protein, OmpA-like, conserved site YPN_2544 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_2544 IPR036737 YPN_2544 YPN_2545 IPR002686 Transposase IS200-like YPN_2545 IPR036515 YPN_2545 YPN_2546 IPR009390 Macrodomain Ter protein, MatP YPN_2546 IPR013321 Arc-type ribbon-helix-helix YPN_2546 IPR035087 YPN_2546 YPN_2546 IPR035375 YPN_2546 YPN_2546 IPR038339 YPN_2546 YPN_2547 IPR008269 Peptidase S16, Lon C-terminal YPN_2547 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_2547 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_2548 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YPN_2548 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPN_2548 IPR029069 HotDog domain YPN_2549 IPR014030 Beta-ketoacyl synthase, N-terminal YPN_2549 IPR016039 Thiolase-like YPN_2550 IPR001584 Integrase, catalytic core YPN_2550 IPR006120 Resolvase, HTH domain YPN_2550 IPR009057 Homeodomain-like YPN_2550 IPR012337 Ribonuclease H-like domain YPN_2551 IPR001270 ClpA/B family YPN_2551 IPR002611 IstB-like ATP-binding protein YPN_2551 IPR003593 AAA+ ATPase domain YPN_2551 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2551 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_2552 IPR014030 Beta-ketoacyl synthase, N-terminal YPN_2552 IPR014031 Beta-ketoacyl synthase, C-terminal YPN_2552 IPR016039 Thiolase-like YPN_2552 IPR018201 Beta-ketoacyl synthase, active site YPN_2552 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPN_2553 IPR002686 Transposase IS200-like YPN_2553 IPR036515 YPN_2553 YPN_2554 IPR007040 Ribosome modulation factor YPN_2554 IPR023200 Ribosome modulation factor-like domain YPN_2555 IPR005586 Protein of unknown function DUF330 YPN_2556 IPR003399 Mammalian cell entry-related YPN_2557 IPR005219 Conserved hypothetical protein CHP00155 YPN_2557 IPR007498 Paraquat-inducible protein A YPN_2558 IPR003439 ABC transporter-like YPN_2558 IPR003593 AAA+ ATPase domain YPN_2558 IPR017871 ABC transporter, conserved site YPN_2558 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2558 IPR032524 YPN_2558 YPN_2558 IPR032781 YPN_2558 YPN_2558 IPR037118 YPN_2558 YPN_2559 IPR000241 Putative RNA methylase domain YPN_2559 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_2559 IPR004114 THUMP YPN_2559 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YPN_2559 IPR019614 S-adenosylmethionine-dependent methyltransferase YPN_2559 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2560 IPR001041 2Fe-2S ferredoxin-type domain YPN_2560 IPR005302 Molybdenum cofactor sulfurase, C-terminal YPN_2560 IPR005303 MOSC, N-terminal beta barrel YPN_2560 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPN_2560 IPR011037 Pyruvate kinase-like, insert domain YPN_2560 IPR012675 Beta-grasp domain YPN_2560 IPR036010 YPN_2560 YPN_2561 IPR009809 Cell division protein ZapC YPN_2562 IPR001295 Dihydroorotate dehydrogenase, conserved site YPN_2562 IPR005719 Dihydroorotate dehydrogenase, class 2 YPN_2562 IPR005720 Dihydroorotate dehydrogenase domain YPN_2562 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YPN_2562 IPR013785 Aldolase-type TIM barrel YPN_2563 IPR012779 Peptidase M1, alanyl aminopeptidase YPN_2563 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal YPN_2563 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPN_2563 IPR027268 YPN_2563 YPN_2563 IPR035414 YPN_2563 YPN_2563 IPR037144 YPN_2563 YPN_2563 IPR038438 YPN_2563 YPN_2564 IPR006406 Nicotinate phosphoribosyltransferase YPN_2564 IPR007229 Nicotinate phosphoribosyltransferase family YPN_2564 IPR036068 YPN_2564 YPN_2565 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPN_2565 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPN_2565 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPN_2565 IPR004522 Asparagine-tRNA ligase YPN_2565 IPR012340 Nucleic acid-binding, OB-fold YPN_2566 IPR001702 Porin, Gram-negative type YPN_2566 IPR001897 Porin, gammaproteobacterial YPN_2566 IPR013793 Porin, Gram-negative type, conserved site YPN_2566 IPR023614 Porin domain YPN_2567 IPR000796 Aspartate/other aminotransferase YPN_2567 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPN_2567 IPR004839 Aminotransferase, class I/classII YPN_2567 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2567 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2567 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2568 IPR001279 Beta-lactamase-like YPN_2568 IPR036866 YPN_2568 YPN_2569 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPN_2569 IPR010275 Protein of unknown function DUF882 YPN_2570 IPR002477 Peptidoglycan binding-like YPN_2570 IPR005490 L,D-transpeptidase catalytic domain YPN_2570 IPR036365 YPN_2570 YPN_2570 IPR036366 YPN_2570 YPN_2570 IPR038063 YPN_2570 YPN_2571 IPR002686 Transposase IS200-like YPN_2571 IPR036515 YPN_2571 YPN_2572 IPR007406 MukB, N-terminal domain YPN_2572 IPR012090 Chromosome partition protein MukB YPN_2572 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2572 IPR032520 YPN_2572 YPN_2573 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YPN_2574 IPR005582 Chromosome partition protein MukF YPN_2574 IPR010916 TonB box, conserved site YPN_2574 IPR033439 YPN_2574 YPN_2574 IPR033440 YPN_2574 YPN_2574 IPR033441 YPN_2574 YPN_2574 IPR036141 YPN_2574 YPN_2574 IPR036388 YPN_2574 YPN_2574 IPR036390 YPN_2574 YPN_2574 IPR038198 YPN_2574 YPN_2575 IPR025714 Methyltransferase domain YPN_2575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2575 IPR033664 YPN_2575 YPN_2576 IPR011009 Protein kinase-like domain YPN_2576 IPR016477 Fructosamine/Ketosamine-3-kinase YPN_2577 IPR003329 Acylneuraminate cytidylyltransferase YPN_2577 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YPN_2577 IPR029044 Nucleotide-diphospho-sugar transferases YPN_2578 IPR005651 Uncharacterised protein family UPF0434/Trm112 YPN_2578 IPR038053 YPN_2578 YPN_2579 IPR002059 Cold-shock protein, DNA-binding YPN_2579 IPR011129 Cold shock protein YPN_2579 IPR012156 Cold shock, CspA YPN_2579 IPR012340 Nucleic acid-binding, OB-fold YPN_2580 IPR009770 Domain of unknown function DUF1338 YPN_2581 IPR003758 Tetraacyldisaccharide 4'-kinase YPN_2581 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2582 IPR003439 ABC transporter-like YPN_2582 IPR003593 AAA+ ATPase domain YPN_2582 IPR011527 ABC transporter type 1, transmembrane domain YPN_2582 IPR011917 ABC transporter, lipid A export, MsbA YPN_2582 IPR017871 ABC transporter, conserved site YPN_2582 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2582 IPR036640 YPN_2582 YPN_2583 IPR001279 Beta-lactamase-like YPN_2583 IPR004477 ComEC/Rec2-related protein YPN_2583 IPR004797 Competence protein ComEC/Rec2 YPN_2583 IPR025405 Domain of unknown function DUF4131 YPN_2583 IPR036866 YPN_2583 YPN_2584 IPR000119 Histone-like bacterial DNA-binding protein YPN_2584 IPR005685 Integration host factor, beta subunit YPN_2584 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPN_2584 IPR020816 Histone-like DNA-binding protein, conserved site YPN_2585 IPR000110 Ribosomal protein S1 YPN_2585 IPR003029 Ribosomal protein S1, RNA-binding domain YPN_2585 IPR012340 Nucleic acid-binding, OB-fold YPN_2585 IPR022967 RNA-binding domain, S1 YPN_2586 IPR003136 Cytidylate kinase YPN_2586 IPR011994 Cytidylate kinase domain YPN_2586 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2587 IPR001986 Enolpyruvate transferase domain YPN_2587 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YPN_2587 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPN_2587 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YPN_2587 IPR036968 YPN_2587 YPN_2588 IPR000192 Aminotransferase class V domain YPN_2588 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2588 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2588 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2588 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPN_2588 IPR022278 Phosphoserine aminotransferase YPN_2589 IPR005594 YadA-like, C-terminal YPN_2589 IPR011049 Serralysin-like metalloprotease, C-terminal YPN_2590 IPR005594 YadA-like, C-terminal YPN_2590 IPR008126 Outer membrane adhesion, Yersinia YPN_2590 IPR011049 Serralysin-like metalloprotease, C-terminal YPN_2591 IPR004550 L-asparaginase, type II YPN_2591 IPR006034 Asparaginase/glutaminase YPN_2591 IPR020827 Asparaginase/glutaminase, active site 1 YPN_2591 IPR027473 L-asparaginase, C-terminal domain YPN_2591 IPR027474 L-asparaginase, N-terminal YPN_2591 IPR027475 Asparaginase/glutaminase, active site 2 YPN_2591 IPR036152 YPN_2591 YPN_2591 IPR037152 YPN_2591 YPN_2592 IPR003776 YcaO-like domain YPN_2593 IPR000292 Formate/nitrite transporter YPN_2593 IPR023271 Aquaporin-like YPN_2593 IPR023999 Formate transporter FocA, putative YPN_2593 IPR024002 Formate/nitrite transporter, conserved site YPN_2594 IPR001150 Glycine radical domain YPN_2594 IPR004184 Pyruvate formate lyase domain YPN_2594 IPR005949 Formate acetyltransferase YPN_2594 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPN_2595 IPR002654 Glycosyl transferase, family 25 YPN_2596 IPR001989 Radical-activating enzyme, conserved site YPN_2596 IPR007197 Radical SAM YPN_2596 IPR012838 Pyruvate formate-lyase activating enzyme YPN_2596 IPR013785 Aldolase-type TIM barrel YPN_2597 IPR011701 Major facilitator superfamily YPN_2597 IPR036259 YPN_2597 YPN_2598 IPR001584 Integrase, catalytic core YPN_2598 IPR006120 Resolvase, HTH domain YPN_2598 IPR009057 Homeodomain-like YPN_2598 IPR012337 Ribonuclease H-like domain YPN_2599 IPR001270 ClpA/B family YPN_2599 IPR002611 IstB-like ATP-binding protein YPN_2599 IPR003593 AAA+ ATPase domain YPN_2599 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2599 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_2600 IPR011701 Major facilitator superfamily YPN_2600 IPR036259 YPN_2600 YPN_2601 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPN_2601 IPR002317 Serine-tRNA ligase, type1 YPN_2601 IPR010978 tRNA-binding arm YPN_2601 IPR015866 Serine-tRNA synthetase, type1, N-terminal YPN_2602 IPR003593 AAA+ ATPase domain YPN_2602 IPR003959 ATPase, AAA-type, core YPN_2602 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPN_2602 IPR021886 MgsA AAA+ ATPase C-terminal YPN_2602 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2602 IPR032423 YPN_2602 YPN_2603 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPN_2603 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YPN_2603 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPN_2604 IPR002543 FtsK domain YPN_2604 IPR018541 FtsK gamma domain YPN_2604 IPR025199 Domain of unknown function DUF4117 YPN_2604 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2604 IPR036388 YPN_2604 YPN_2604 IPR036390 YPN_2604 YPN_2605 IPR000485 AsnC-type HTH domain YPN_2605 IPR011008 Dimeric alpha-beta barrel YPN_2605 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPN_2605 IPR019887 Transcription regulator AsnC-type, C-terminal YPN_2605 IPR019888 Transcription regulator AsnC-type YPN_2605 IPR036388 YPN_2605 YPN_2605 IPR036390 YPN_2605 YPN_2606 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II YPN_2606 IPR005982 Thioredoxin reductase YPN_2606 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YPN_2606 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_2606 IPR036188 YPN_2606 YPN_2607 IPR003439 ABC transporter-like YPN_2607 IPR003593 AAA+ ATPase domain YPN_2607 IPR011527 ABC transporter type 1, transmembrane domain YPN_2607 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YPN_2607 IPR017871 ABC transporter, conserved site YPN_2607 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2607 IPR036640 YPN_2607 YPN_2608 IPR003439 ABC transporter-like YPN_2608 IPR003593 AAA+ ATPase domain YPN_2608 IPR011527 ABC transporter type 1, transmembrane domain YPN_2608 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YPN_2608 IPR017871 ABC transporter, conserved site YPN_2608 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2608 IPR036640 YPN_2608 YPN_2609 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YPN_2609 IPR016181 Acyl-CoA N-acyltransferase YPN_2610 IPR004368 Translation initiation factor IF-1 YPN_2610 IPR006196 RNA-binding domain, S1, IF1 type YPN_2610 IPR012340 Nucleic acid-binding, OB-fold YPN_2610 IPR022967 RNA-binding domain, S1 YPN_2611 IPR002686 Transposase IS200-like YPN_2611 IPR036515 YPN_2611 YPN_2612 IPR001270 ClpA/B family YPN_2612 IPR003593 AAA+ ATPase domain YPN_2612 IPR003959 ATPase, AAA-type, core YPN_2612 IPR004176 Clp, N-terminal YPN_2612 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YPN_2612 IPR018368 ClpA/B, conserved site 1 YPN_2612 IPR019489 Clp ATPase, C-terminal YPN_2612 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2612 IPR028299 ClpA/B, conserved site 2 YPN_2612 IPR036628 YPN_2612 YPN_2613 IPR003769 Adaptor protein ClpS, core YPN_2613 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPN_2613 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPN_2614 IPR002059 Cold-shock protein, DNA-binding YPN_2614 IPR011129 Cold shock protein YPN_2614 IPR012156 Cold shock, CspA YPN_2614 IPR012340 Nucleic acid-binding, OB-fold YPN_2614 IPR012751 CspD, cold shock YPN_2614 IPR019844 Cold-shock conserved site YPN_2615 IPR003439 ABC transporter-like YPN_2615 IPR003593 AAA+ ATPase domain YPN_2615 IPR003838 Permease FtsX-like YPN_2615 IPR017871 ABC transporter, conserved site YPN_2615 IPR025857 MacB-like periplasmic core domain YPN_2615 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2616 IPR006143 RND efflux pump, membrane fusion protein YPN_2616 IPR032317 YPN_2616 YPN_2618 IPR007488 Protein of unknown function DUF535 YPN_2619 IPR022602 Protein of unknown function DUF2813 YPN_2619 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2620 IPR005642 Protein of unknown function DUF340, prokaryotic membrane YPN_2621 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YPN_2621 IPR010048 Hydroxylamine reductase YPN_2621 IPR011254 Prismane-like YPN_2621 IPR016099 Prismane-like, alpha/beta-sandwich YPN_2621 IPR016100 Prismane, alpha-bundle YPN_2622 IPR001041 2Fe-2S ferredoxin-type domain YPN_2622 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_2622 IPR001834 NADH:cytochrome b5 reductase (CBR) YPN_2622 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPN_2622 IPR008333 Oxidoreductase, FAD-binding domain YPN_2622 IPR012675 Beta-grasp domain YPN_2622 IPR017938 Riboflavin synthase-like beta-barrel YPN_2622 IPR036010 YPN_2622 YPN_2622 IPR039261 YPN_2622 YPN_2623 IPR000399 TPP-binding enzyme, conserved site YPN_2623 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPN_2623 IPR012000 Thiamine pyrophosphate enzyme, central domain YPN_2623 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPN_2623 IPR029035 DHS-like NAD/FAD-binding domain YPN_2623 IPR029061 Thiamin diphosphate-binding fold YPN_2625 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YPN_2625 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2625 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2625 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2625 IPR023603 Threonine aldolase YPN_2626 IPR016040 NAD(P)-binding domain YPN_2626 IPR021295 Protein of unknown function DUF2867 YPN_2626 IPR036291 YPN_2626 YPN_2627 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_2627 IPR036291 YPN_2627 YPN_2628 IPR024289 Domain of unknown function DUF3828 YPN_2630 IPR002701 Chorismate mutase YPN_2630 IPR008240 Chorismate mutase, periplasmic YPN_2630 IPR036263 YPN_2630 YPN_2631 IPR003439 ABC transporter-like YPN_2631 IPR003593 AAA+ ATPase domain YPN_2631 IPR017871 ABC transporter, conserved site YPN_2631 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2631 IPR030679 YPN_2631 YPN_2632 IPR001320 Ionotropic glutamate receptor YPN_2632 IPR001638 Extracellular solute-binding protein, family 3 YPN_2632 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPN_2632 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPN_2633 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_2633 IPR035906 YPN_2633 YPN_2634 IPR035906 YPN_2634 YPN_2635 IPR000515 MetI-like domain YPN_2635 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_2635 IPR035906 YPN_2635 YPN_2636 IPR000620 Drug/metabolite transporter YPN_2637 IPR016935 Protein of unknown function DUF2338 YPN_2637 IPR036291 YPN_2637 YPN_2638 IPR004298 Nicotianamine synthase YPN_2638 IPR036291 YPN_2638 YPN_2639 IPR003439 ABC transporter-like YPN_2639 IPR003593 AAA+ ATPase domain YPN_2639 IPR017871 ABC transporter, conserved site YPN_2639 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2640 IPR000522 ABC transporter, permease protein YPN_2640 IPR037294 YPN_2640 YPN_2641 IPR002491 ABC transporter periplasmic binding domain YPN_2642 IPR001107 Band 7 protein YPN_2642 IPR036013 YPN_2642 YPN_2643 IPR001320 Ionotropic glutamate receptor YPN_2643 IPR001638 Extracellular solute-binding protein, family 3 YPN_2643 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPN_2643 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPN_2644 IPR010280 (Uracil-5)-methyltransferase family YPN_2644 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPN_2644 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2644 IPR030390 YPN_2644 YPN_2644 IPR030391 YPN_2644 YPN_2645 IPR019703 Protein of unknown function DUF2593 YPN_2646 IPR000515 MetI-like domain YPN_2646 IPR035906 YPN_2646 YPN_2647 IPR000515 MetI-like domain YPN_2647 IPR035906 YPN_2647 YPN_2648 IPR003439 ABC transporter-like YPN_2648 IPR003593 AAA+ ATPase domain YPN_2648 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPN_2648 IPR008995 Molybdate/tungstate binding, C-terminal YPN_2648 IPR013611 Transport-associated OB, type 2 YPN_2648 IPR017871 ABC transporter, conserved site YPN_2648 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2649 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YPN_2649 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_2650 IPR019660 Putative sensory transduction regulator YbjN YPN_2651 IPR010815 Protein of unknown function DUF1418 YPN_2652 IPR002109 Glutaredoxin YPN_2652 IPR011767 Glutaredoxin active site YPN_2652 IPR011902 Glutaredoxin, GrxA YPN_2652 IPR014025 Glutaredoxin subgroup YPN_2652 IPR036249 YPN_2652 YPN_2653 IPR006037 Regulator of K+ conductance, C-terminal YPN_2653 IPR006512 YidE/YbjL duplication YPN_2653 IPR023017 Transport protein YbjL, putative YPN_2653 IPR036721 YPN_2653 YPN_2654 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPN_2654 IPR036938 YPN_2654 YPN_2655 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPN_2655 IPR036938 YPN_2655 YPN_2656 IPR002915 DeoC/FbaB/ lacD aldolase YPN_2656 IPR011343 Deoxyribose-phosphate aldolase YPN_2656 IPR013785 Aldolase-type TIM barrel YPN_2656 IPR028581 Deoxyribose-phosphate aldolase type I YPN_2657 IPR001034 HTH DeoR N-terminal domain YPN_2657 IPR014036 DeoR C-terminal sensor domain YPN_2657 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPN_2657 IPR037171 YPN_2657 YPN_2658 IPR004694 Hydroxy amino acid transporter YPN_2658 IPR018227 Tryptophan/tyrosine permease YPN_2659 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPN_2659 IPR012338 Beta-lactamase/transpeptidase-like YPN_2659 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPN_2659 IPR015956 Penicillin-binding protein-associated YPN_2659 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPN_2659 IPR037167 YPN_2659 YPN_2660 IPR000515 MetI-like domain YPN_2660 IPR035906 YPN_2660 YPN_2661 IPR003439 ABC transporter-like YPN_2661 IPR003593 AAA+ ATPase domain YPN_2661 IPR017871 ABC transporter, conserved site YPN_2661 IPR018449 NIL domain YPN_2661 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2662 IPR004872 Lipoprotein NlpA family YPN_2663 IPR005123 Oxoglutarate/iron-dependent dioxygenase YPN_2663 IPR026992 Non-haem dioxygenase N-terminal domain YPN_2663 IPR027443 Isopenicillin N synthase-like YPN_2664 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial YPN_2664 IPR023214 HAD-like domain YPN_2664 IPR036412 YPN_2664 YPN_2665 IPR004045 Glutathione S-transferase, N-terminal YPN_2665 IPR004046 Glutathione S-transferase, C-terminal YPN_2665 IPR036249 YPN_2665 YPN_2665 IPR036282 YPN_2665 YPN_2666 IPR000531 TonB-dependent receptor, beta-barrel YPN_2666 IPR010916 TonB box, conserved site YPN_2666 IPR012910 TonB-dependent receptor, plug YPN_2666 IPR036942 YPN_2666 YPN_2666 IPR037066 YPN_2666 YPN_2667 IPR003439 ABC transporter-like YPN_2667 IPR003593 AAA+ ATPase domain YPN_2667 IPR017871 ABC transporter, conserved site YPN_2667 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2668 IPR000522 ABC transporter, permease protein YPN_2668 IPR037294 YPN_2668 YPN_2669 IPR002491 ABC transporter periplasmic binding domain YPN_2670 IPR002293 Amino acid/polyamine transporter I YPN_2670 IPR004840 Amino acid permease, conserved site YPN_2670 IPR004841 Amino acid permease/ SLC12A domain YPN_2671 IPR000847 Transcription regulator HTH, LysR YPN_2671 IPR005119 LysR, substrate-binding YPN_2671 IPR036388 YPN_2671 YPN_2671 IPR036390 YPN_2671 YPN_2672 IPR004630 Uncharacterised protein family UPF0324, bacteria YPN_2672 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPN_2673 IPR001719 AP endonuclease 2 YPN_2673 IPR013022 Xylose isomerase-like, TIM barrel domain YPN_2673 IPR018246 AP endonuclease 2, zinc binding site YPN_2673 IPR036237 YPN_2673 YPN_2674 IPR000015 Outer membrane usher protein YPN_2674 IPR018030 Fimbrial membrane usher, conserved site YPN_2674 IPR025885 PapC, N-terminal domain YPN_2674 IPR025949 PapC-like, C-terminal domain YPN_2674 IPR037224 YPN_2674 YPN_2675 IPR001829 Pili assembly chaperone, bacterial YPN_2675 IPR008962 PapD-like YPN_2675 IPR013783 Immunoglobulin-like fold YPN_2675 IPR016147 PapD, N-terminal, bacterial YPN_2675 IPR016148 Pili assembly chaperone, C-terminal domain YPN_2675 IPR018046 Pili assembly chaperone, conserved site YPN_2675 IPR036316 YPN_2675 YPN_2677 IPR035182 YPN_2677 YPN_2678 IPR001867 Signal transduction response regulator, C-terminal YPN_2678 IPR016032 Signal transduction response regulator, C-terminal effector YPN_2678 IPR036388 YPN_2678 YPN_2679 IPR003352 Phosphotransferase system, EIIC YPN_2679 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPN_2679 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPN_2679 IPR006327 Phosphotransferase system, fructose IIC component YPN_2679 IPR036095 YPN_2679 YPN_2680 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPN_2680 IPR011611 Carbohydrate kinase PfkB YPN_2680 IPR017583 Tagatose/fructose phosphokinase YPN_2680 IPR022463 Fructose 1-phosphate kinase YPN_2680 IPR029056 Ribokinase-like YPN_2681 IPR000032 Phosphocarrier HPr protein-like YPN_2681 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPN_2681 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPN_2681 IPR002178 PTS EIIA type-2 domain YPN_2681 IPR016152 Phosphotransferase/anion transporter YPN_2681 IPR035895 YPN_2681 YPN_2682 IPR000086 NUDIX hydrolase domain YPN_2682 IPR015797 NUDIX hydrolase domain-like YPN_2682 IPR020084 NUDIX hydrolase, conserved site YPN_2682 IPR020476 NUDIX hydrolase YPN_2683 IPR001851 ABC transporter, permease YPN_2684 IPR003439 ABC transporter-like YPN_2684 IPR003593 AAA+ ATPase domain YPN_2684 IPR017871 ABC transporter, conserved site YPN_2684 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2685 IPR025997 Periplasmic binding protein domain YPN_2685 IPR028082 Periplasmic binding protein-like I YPN_2686 IPR004788 Ribose 5-phosphate isomerase, type A YPN_2686 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPN_2686 IPR037171 YPN_2686 YPN_2687 IPR000577 YPN_2687 YPN_2687 IPR006000 Xylulokinase YPN_2687 IPR018483 Carbohydrate kinase, FGGY, conserved site YPN_2687 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_2687 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_2688 IPR015590 Aldehyde dehydrogenase domain YPN_2688 IPR016160 Aldehyde dehydrogenase, cysteine active site YPN_2688 IPR016161 Aldehyde/histidinol dehydrogenase YPN_2688 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_2688 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_2689 IPR011234 Fumarylacetoacetase, C-terminal-related YPN_2689 IPR036663 YPN_2689 YPN_2690 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPN_2690 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPN_2690 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPN_2690 IPR036291 YPN_2690 YPN_2691 IPR002347 Glucose/ribitol dehydrogenase YPN_2691 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_2691 IPR036291 YPN_2691 YPN_2692 IPR005358 Putative zinc- or iron-chelating domain containing protein YPN_2693 IPR002293 Amino acid/polyamine transporter I YPN_2693 IPR013059 Tryptophan/tyrosine transporter YPN_2693 IPR018227 Tryptophan/tyrosine permease YPN_2694 IPR001059 Translation elongation factor P/YeiP, central YPN_2694 IPR008991 Translation protein SH3-like domain YPN_2694 IPR011897 Translation elongation factor P-like, YeiP YPN_2694 IPR012340 Nucleic acid-binding, OB-fold YPN_2694 IPR013185 Translation elongation factor, KOW-like YPN_2694 IPR013852 Translation elongation factor P/YeiP, conserved site YPN_2694 IPR014722 Ribosomal protein L2 domain 2 YPN_2694 IPR015365 Elongation factor P, C-terminal YPN_2694 IPR020599 Translation elongation factor P/YeiP YPN_2695 IPR004628 Mannonate dehydratase YPN_2695 IPR036237 YPN_2695 YPN_2696 IPR000669 Mannitol dehydrogenase YPN_2696 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_2696 IPR013118 Mannitol dehydrogenase, C-terminal YPN_2696 IPR013131 Mannitol dehydrogenase, N-terminal YPN_2696 IPR013328 Dehydrogenase, multihelical YPN_2696 IPR023027 Mannitol dehydrogenase, conserved site YPN_2696 IPR036291 YPN_2696 YPN_2697 IPR000524 Transcription regulator HTH, GntR YPN_2697 IPR008920 Transcription regulator FadR/GntR, C-terminal YPN_2697 IPR011711 GntR, C-terminal YPN_2697 IPR036388 YPN_2697 YPN_2697 IPR036390 YPN_2697 YPN_2699 IPR003495 CobW/HypB/UreG domain YPN_2699 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPN_2699 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2700 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPN_2700 IPR032908 YPN_2700 YPN_2700 IPR036938 YPN_2700 YPN_2701 IPR000064 Endopeptidase, NLPC/P60 domain YPN_2701 IPR038765 YPN_2701 YPN_2702 IPR001633 EAL domain YPN_2702 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YPN_2702 IPR035919 YPN_2702 YPN_2703 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_2703 IPR030678 YPN_2703 YPN_2704 IPR000515 MetI-like domain YPN_2704 IPR035906 YPN_2704 YPN_2705 IPR000515 MetI-like domain YPN_2705 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPN_2705 IPR035906 YPN_2705 YPN_2706 IPR003439 ABC transporter-like YPN_2706 IPR003593 AAA+ ATPase domain YPN_2706 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPN_2706 IPR017871 ABC transporter, conserved site YPN_2706 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2707 IPR020489 Uncharacterised protein family YejG YPN_2709 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPN_2709 IPR011701 Major facilitator superfamily YPN_2709 IPR036259 YPN_2709 YPN_2710 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPN_2710 IPR002942 RNA-binding S4 domain YPN_2710 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPN_2710 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPN_2710 IPR020103 Pseudouridine synthase, catalytic domain YPN_2710 IPR036986 YPN_2710 YPN_2711 IPR001650 Helicase, C-terminal YPN_2711 IPR006935 Helicase/UvrB domain YPN_2711 IPR011332 Zinc-binding ribosomal protein YPN_2711 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_2711 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2712 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YPN_2712 IPR020055 Ribosomal protein L25, short-form YPN_2712 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YPN_2712 IPR029751 Ribosomal protein L25 YPN_2713 IPR002686 Transposase IS200-like YPN_2713 IPR036515 YPN_2713 YPN_2714 IPR007358 Nucleoid-associated protein NdpA YPN_2715 IPR009857 Uncharacterised protein family UPF0352 YPN_2715 IPR023202 YejL-like domain YPN_2716 IPR000917 Sulfatase YPN_2716 IPR012159 Membrane sulfatase, HI0842-related YPN_2716 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_2716 IPR017850 Alkaline-phosphatase-like, core domain YPN_2716 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain YPN_2718 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type YPN_2722 IPR001360 Glycoside hydrolase, family 1 YPN_2722 IPR017853 Glycoside hydrolase, superfamily YPN_2722 IPR018120 Glycoside hydrolase, family 1, active site YPN_2722 IPR033132 YPN_2722 YPN_2723 IPR000281 Helix-turn-helix protein RpiR YPN_2723 IPR001347 Sugar isomerase (SIS) YPN_2723 IPR009057 Homeodomain-like YPN_2723 IPR036388 YPN_2723 YPN_2724 IPR011083 Phage tail collar domain YPN_2724 IPR037053 YPN_2724 YPN_2725 IPR018755 Bacteriophage Mu, Gp48 YPN_2726 IPR018755 Bacteriophage Mu, Gp48 YPN_2727 IPR006949 Baseplate assembly protein J-like, predicted YPN_2728 IPR010877 Bacteriophage Mu, Gp46 YPN_2729 IPR014462 Bacteriophage Mu, Gp45 YPN_2730 IPR023399 Baseplate-like protein, two-layer sandwich domain YPN_2730 IPR026276 Baseplate protein GpP YPN_2731 IPR009826 DNA circulation, N-terminal YPN_2733 IPR019289 Bacteriophage tail protein Gp41, putative YPN_2735 IPR019596 Bacteriophage Mu, GpM, tail tube YPN_2736 IPR007067 Tail sheath protein YPN_2736 IPR020287 Tail sheath protein, C-terminal domain YPN_2736 IPR035089 YPN_2736 YPN_2737 IPR024400 Protein of unknown function DUF2635 YPN_2740 IPR013022 Xylose isomerase-like, TIM barrel domain YPN_2740 IPR026040 Hydroxypyruvate isomerase-like YPN_2740 IPR036237 YPN_2740 YPN_2741 IPR001034 HTH DeoR N-terminal domain YPN_2741 IPR014036 DeoR C-terminal sensor domain YPN_2741 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPN_2741 IPR036388 YPN_2741 YPN_2741 IPR036390 YPN_2741 YPN_2741 IPR037171 YPN_2741 YPN_2742 IPR001303 Class II aldolase/adducin N-terminal YPN_2742 IPR036409 YPN_2742 YPN_2743 IPR010737 Protein of unknown function, DUF1537 YPN_2743 IPR031475 YPN_2743 YPN_2743 IPR037051 YPN_2743 YPN_2744 IPR010534 Bacteriophage 933W, GpQ YPN_2745 IPR001387 Cro/C1-type helix-turn-helix domain YPN_2745 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2745 IPR015927 Peptidase S24/S26A/S26B/S26C YPN_2745 IPR036286 YPN_2745 YPN_2747 IPR010391 DNA damage-inducible protein DinI-like YPN_2747 IPR036687 YPN_2747 YPN_2748 IPR000036 Peptidase A26, omptin YPN_2748 IPR020080 Outer membrane adhesin/peptidase omptin YPN_2749 IPR003660 HAMP linker domain YPN_2749 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_2749 IPR029151 Periplasmic sensor domain-like YPN_2749 IPR033479 YPN_2749 YPN_2750 IPR001279 Beta-lactamase-like YPN_2750 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YPN_2750 IPR036866 YPN_2750 YPN_2751 IPR036259 YPN_2751 YPN_2753 IPR001466 Beta-lactamase-related YPN_2753 IPR012338 Beta-lactamase/transpeptidase-like YPN_2754 IPR002686 Transposase IS200-like YPN_2754 IPR036515 YPN_2754 YPN_2755 IPR001702 Porin, Gram-negative type YPN_2755 IPR001897 Porin, gammaproteobacterial YPN_2755 IPR013793 Porin, Gram-negative type, conserved site YPN_2755 IPR023614 Porin domain YPN_2756 IPR011701 Major facilitator superfamily YPN_2756 IPR036259 YPN_2756 YPN_2757 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_2757 IPR036890 YPN_2757 YPN_2758 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPN_2758 IPR032306 YPN_2758 YPN_2758 IPR036641 YPN_2758 YPN_2758 IPR038616 YPN_2758 YPN_2759 IPR000792 Transcription regulator LuxR, C-terminal YPN_2759 IPR001789 Signal transduction response regulator, receiver domain YPN_2759 IPR011006 CheY-like superfamily YPN_2759 IPR016032 Signal transduction response regulator, C-terminal effector YPN_2759 IPR030864 YPN_2759 YPN_2759 IPR036388 YPN_2759 YPN_2760 IPR001789 Signal transduction response regulator, receiver domain YPN_2760 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_2760 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_2760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_2760 IPR011006 CheY-like superfamily YPN_2760 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YPN_2760 IPR030856 YPN_2760 YPN_2760 IPR036097 YPN_2760 YPN_2760 IPR036890 YPN_2760 YPN_2760 IPR038388 YPN_2760 YPN_2761 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPN_2761 IPR005743 DNA gyrase, subunit A YPN_2761 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YPN_2761 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain YPN_2761 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPN_2761 IPR013760 DNA topoisomerase, type IIA-like domain YPN_2761 IPR035516 YPN_2761 YPN_2762 IPR010233 Ubiquinone biosynthesis O-methyltransferase YPN_2762 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2763 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPN_2763 IPR005144 ATP-cone YPN_2763 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPN_2763 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPN_2763 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPN_2764 IPR000358 Ribonucleotide reductase small subunit YPN_2764 IPR009078 Ferritin-like superfamily YPN_2764 IPR012348 Ribonucleotide reductase-related YPN_2764 IPR030475 YPN_2764 YPN_2765 IPR001041 2Fe-2S ferredoxin-type domain YPN_2765 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPN_2765 IPR012675 Beta-grasp domain YPN_2765 IPR036010 YPN_2765 YPN_2766 IPR005658 Proteinase inhibitor I11, ecotin YPN_2766 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPN_2766 IPR036198 YPN_2766 YPN_2767 IPR001453 Molybdopterin binding domain YPN_2767 IPR008135 Competence-induced protein CinA YPN_2767 IPR036425 YPN_2767 YPN_2768 IPR013059 Tryptophan/tyrosine transporter YPN_2768 IPR013061 Tryptophan/tryrosine permease, conserved site YPN_2768 IPR018227 Tryptophan/tyrosine permease YPN_2769 IPR009998 YfaZ YPN_2769 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPN_2770 IPR010582 Catalase immune-responsive domain YPN_2770 IPR011614 Catalase core domain YPN_2770 IPR018028 Catalase, mono-functional, haem-containing YPN_2770 IPR020835 Catalase-like domain YPN_2770 IPR024708 Catalase active site YPN_2770 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YPN_2770 IPR037060 YPN_2770 YPN_2771 IPR006554 Helicase-like, DEXD box c2 type YPN_2771 IPR006555 ATP-dependent helicase, C-terminal YPN_2771 IPR010614 DEAD2 YPN_2771 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_2771 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2771 IPR039000 YPN_2771 YPN_2772 IPR001702 Porin, Gram-negative type YPN_2772 IPR001897 Porin, gammaproteobacterial YPN_2772 IPR013793 Porin, Gram-negative type, conserved site YPN_2772 IPR023614 Porin domain YPN_2773 IPR000620 Drug/metabolite transporter YPN_2775 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPN_2775 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPN_2775 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPN_2775 IPR011193 Ornithine/lysine/arginine decarboxylase YPN_2775 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2775 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2775 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2775 IPR036633 YPN_2775 YPN_2776 IPR002293 Amino acid/polyamine transporter I YPN_2777 IPR000515 MetI-like domain YPN_2777 IPR035906 YPN_2777 YPN_2778 IPR003439 ABC transporter-like YPN_2778 IPR003593 AAA+ ATPase domain YPN_2778 IPR017871 ABC transporter, conserved site YPN_2778 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2779 IPR000515 MetI-like domain YPN_2779 IPR035906 YPN_2779 YPN_2780 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPN_2781 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPN_2782 IPR001307 Thiosulphate sulfurtransferase, conserved site YPN_2782 IPR001763 Rhodanese-like domain YPN_2782 IPR036873 YPN_2782 YPN_2783 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPN_2783 IPR010977 Aromatic-L-amino-acid decarboxylase YPN_2783 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2783 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2783 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2784 IPR005123 Oxoglutarate/iron-dependent dioxygenase YPN_2784 IPR016946 Uncharacterised conserved protein UCP030125 YPN_2785 IPR003439 ABC transporter-like YPN_2785 IPR003593 AAA+ ATPase domain YPN_2785 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YPN_2785 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2786 IPR003439 ABC transporter-like YPN_2786 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YPN_2786 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2786 IPR032823 YPN_2786 YPN_2787 IPR001851 ABC transporter, permease YPN_2787 IPR017778 ABC transporter, urea, permease protein, UrtC YPN_2788 IPR001851 ABC transporter, permease YPN_2788 IPR011989 Armadillo-like helical YPN_2788 IPR016024 Armadillo-type fold YPN_2788 IPR017779 ABC transporter, urea, permease protein, UrtB YPN_2789 IPR000709 Leu/Ile/Val-binding protein YPN_2789 IPR017777 ABC transporter, urea, substrate-binding, UrtA YPN_2789 IPR028082 Periplasmic binding protein-like I YPN_2790 IPR009921 Domain of unknown function DUF1456 YPN_2791 IPR000515 MetI-like domain YPN_2791 IPR005769 ABC transporter, permease PhnE/PtxC YPN_2791 IPR035906 YPN_2791 YPN_2792 IPR000515 MetI-like domain YPN_2792 IPR005769 ABC transporter, permease PhnE/PtxC YPN_2792 IPR035906 YPN_2792 YPN_2793 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein YPN_2793 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein YPN_2794 IPR003439 ABC transporter-like YPN_2794 IPR003593 AAA+ ATPase domain YPN_2794 IPR012693 ABC transporter, phosphonate import, PhnC YPN_2794 IPR017871 ABC transporter, conserved site YPN_2794 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2795 IPR007341 Transglycosylase-associated protein YPN_2796 IPR020941 Suppressor of fused-like domain YPN_2798 IPR002711 HNH endonuclease YPN_2798 IPR003615 HNH nuclease YPN_2799 IPR008173 Adenylyl cyclase CyaB YPN_2799 IPR023577 CYTH-like domain YPN_2799 IPR033469 YPN_2799 YPN_2800 IPR006094 FAD linked oxidase, N-terminal YPN_2800 IPR012256 D-lactate dehydrogenase YPN_2800 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YPN_2800 IPR016164 FAD-linked oxidase-like, C-terminal YPN_2800 IPR016167 FAD-binding, type 2, subdomain 1 YPN_2800 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_2800 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YPN_2800 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YPN_2800 IPR036318 YPN_2800 YPN_2801 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPN_2801 IPR012338 Beta-lactamase/transpeptidase-like YPN_2801 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPN_2803 IPR001269 tRNA-dihydrouridine synthase YPN_2803 IPR013785 Aldolase-type TIM barrel YPN_2803 IPR018517 tRNA-dihydrouridine synthase, conserved site YPN_2803 IPR032886 YPN_2803 YPN_2805 IPR002686 Transposase IS200-like YPN_2805 IPR036515 YPN_2805 YPN_2806 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPN_2806 IPR001650 Helicase, C-terminal YPN_2806 IPR011545 DEAD/DEAH box helicase domain YPN_2806 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2807 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPN_2808 IPR001207 Transposase, mutator type YPN_2812 IPR038717 YPN_2812 YPN_2814 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPN_2814 IPR001650 Helicase, C-terminal YPN_2814 IPR011545 DEAD/DEAH box helicase domain YPN_2814 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_2814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2814 IPR028622 ATP-dependent RNA helicase RhlE YPN_2815 IPR001647 DNA-binding HTH domain, TetR-type YPN_2815 IPR009057 Homeodomain-like YPN_2815 IPR015292 Transcription regulator YbiH, C-terminal YPN_2815 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPN_2815 IPR036271 YPN_2815 YPN_2816 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YPN_2816 IPR032317 YPN_2816 YPN_2817 IPR003439 ABC transporter-like YPN_2817 IPR003593 AAA+ ATPase domain YPN_2817 IPR017871 ABC transporter, conserved site YPN_2817 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2819 IPR000412 ABC-2 transporter YPN_2820 IPR009799 EthD domain YPN_2820 IPR011008 Dimeric alpha-beta barrel YPN_2822 IPR000847 Transcription regulator HTH, LysR YPN_2822 IPR005119 LysR, substrate-binding YPN_2822 IPR036388 YPN_2822 YPN_2822 IPR036390 YPN_2822 YPN_2823 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPN_2823 IPR013785 Aldolase-type TIM barrel YPN_2824 IPR001789 Signal transduction response regulator, receiver domain YPN_2824 IPR002078 RNA polymerase sigma factor 54 interaction domain YPN_2824 IPR002197 DNA binding HTH domain, Fis-type YPN_2824 IPR003593 AAA+ ATPase domain YPN_2824 IPR009057 Homeodomain-like YPN_2824 IPR011006 CheY-like superfamily YPN_2824 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPN_2824 IPR025944 Sigma-54 interaction domain, conserved site YPN_2824 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2825 IPR000014 PAS domain YPN_2825 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_2825 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_2825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_2825 IPR013767 PAS fold YPN_2825 IPR029151 Periplasmic sensor domain-like YPN_2825 IPR033463 YPN_2825 YPN_2825 IPR035965 YPN_2825 YPN_2825 IPR036097 YPN_2825 YPN_2825 IPR036890 YPN_2825 YPN_2826 IPR020365 Zinc resistance-associated protein, ZraP YPN_2826 IPR025961 Heavy-metal resistance protein YPN_2827 IPR004740 Nucleoside:H+ symporter YPN_2827 IPR036259 YPN_2827 YPN_2828 IPR002686 Transposase IS200-like YPN_2828 IPR036515 YPN_2828 YPN_2829 IPR004740 Nucleoside:H+ symporter YPN_2829 IPR036259 YPN_2829 YPN_2830 IPR000845 Nucleoside phosphorylase domain YPN_2830 IPR010943 Xanthosine phosphorylase YPN_2830 IPR011268 Purine nucleoside phosphorylase YPN_2830 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific YPN_2830 IPR035994 YPN_2830 YPN_2831 IPR000620 Drug/metabolite transporter YPN_2832 IPR000847 Transcription regulator HTH, LysR YPN_2832 IPR005119 LysR, substrate-binding YPN_2832 IPR036388 YPN_2832 YPN_2832 IPR036390 YPN_2832 YPN_2833 IPR000060 BCCT transporter family YPN_2833 IPR018093 BCCT transporter, conserved site YPN_2834 IPR001647 DNA-binding HTH domain, TetR-type YPN_2834 IPR009057 Homeodomain-like YPN_2834 IPR017757 Transcriptional repressor BetI YPN_2834 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPN_2834 IPR036271 YPN_2834 YPN_2834 IPR039538 YPN_2834 YPN_2835 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase YPN_2835 IPR015590 Aldehyde dehydrogenase domain YPN_2835 IPR016160 Aldehyde dehydrogenase, cysteine active site YPN_2835 IPR016161 Aldehyde/histidinol dehydrogenase YPN_2835 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_2835 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_2835 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPN_2836 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YPN_2836 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YPN_2836 IPR011533 Oxygen-dependent choline dehydrogenase YPN_2836 IPR012132 Glucose-methanol-choline oxidoreductase YPN_2836 IPR027424 Glucose Oxidase, domain 2 YPN_2836 IPR036188 YPN_2836 YPN_2837 IPR002686 Transposase IS200-like YPN_2837 IPR036515 YPN_2837 YPN_2838 IPR006214 Bax inhibitor 1-related YPN_2839 IPR003448 Molybdopterin biosynthesis MoaE YPN_2839 IPR036563 YPN_2839 YPN_2840 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPN_2840 IPR012675 Beta-grasp domain YPN_2840 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPN_2841 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YPN_2841 IPR023045 Molybdenum cofactor biosynthesis C YPN_2841 IPR036522 YPN_2841 YPN_2842 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YPN_2842 IPR006638 Elongator protein 3/MiaB/NifB YPN_2842 IPR007197 Radical SAM YPN_2842 IPR010505 Molybdenum cofactor synthesis C-terminal YPN_2842 IPR013483 Molybdenum cofactor biosynthesis protein A YPN_2842 IPR013785 Aldolase-type TIM barrel YPN_2843 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPN_2843 IPR010119 Gluconeogenesis factor YPN_2843 IPR038136 YPN_2843 YPN_2844 IPR018668 Protein of unknown function DUF2132 YPN_2844 IPR036361 YPN_2844 YPN_2845 IPR001650 Helicase, C-terminal YPN_2845 IPR001943 UVR domain YPN_2845 IPR004807 UvrABC system, subunit B YPN_2845 IPR006935 Helicase/UvrB domain YPN_2845 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_2845 IPR024759 UvrB, YAD/RRR-motif-containing domain YPN_2845 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2845 IPR036876 YPN_2845 YPN_2846 IPR003439 ABC transporter-like YPN_2846 IPR003593 AAA+ ATPase domain YPN_2846 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2847 IPR004472 Dethiobiotin synthase BioD YPN_2847 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2848 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YPN_2848 IPR013216 Methyltransferase type 11 YPN_2848 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2849 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPN_2849 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YPN_2849 IPR004839 Aminotransferase, class I/classII YPN_2849 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2849 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2849 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2849 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YPN_2850 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YPN_2850 IPR006638 Elongator protein 3/MiaB/NifB YPN_2850 IPR007197 Radical SAM YPN_2850 IPR010722 Biotin and thiamin synthesis-associated domain YPN_2850 IPR013785 Aldolase-type TIM barrel YPN_2850 IPR024177 Biotin synthase YPN_2851 IPR005814 Aminotransferase class-III YPN_2851 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPN_2851 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2851 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2851 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2852 IPR011045 Nitrous oxide reductase, N-terminal YPN_2852 IPR015943 WD40/YVTN repeat-like-containing domain YPN_2852 IPR019405 Lactonase, 7-bladed beta propeller YPN_2852 IPR022528 6-phosphogluconolactonase, YbhE-type YPN_2853 IPR000150 Cof protein YPN_2853 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPN_2853 IPR023214 HAD-like domain YPN_2853 IPR036412 YPN_2853 YPN_2854 IPR003439 ABC transporter-like YPN_2854 IPR003593 AAA+ ATPase domain YPN_2854 IPR004606 Molybdenum-pterin binding YPN_2854 IPR005116 Transport-associated OB, type 1 YPN_2854 IPR008995 Molybdate/tungstate binding, C-terminal YPN_2854 IPR011868 Molybdate ABC transporter, ATP-binding protein YPN_2854 IPR017871 ABC transporter, conserved site YPN_2854 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2855 IPR000515 MetI-like domain YPN_2855 IPR011867 Molybdate ABC transporter, permease protein YPN_2855 IPR035906 YPN_2855 YPN_2856 IPR005950 Molybdenum ABC transporter, periplasmic binding protein YPN_2857 IPR019702 Protein of unknown function DUF2592 YPN_2858 IPR000847 Transcription regulator HTH, LysR YPN_2858 IPR003725 Molybdenum-binding protein, N-terminal YPN_2858 IPR004606 Molybdenum-pterin binding YPN_2858 IPR005116 Transport-associated OB, type 1 YPN_2858 IPR008995 Molybdate/tungstate binding, C-terminal YPN_2858 IPR016462 Molybdate-dependent transcriptional regulator, ModE YPN_2858 IPR036388 YPN_2858 YPN_2858 IPR036390 YPN_2858 YPN_2859 IPR003439 ABC transporter-like YPN_2859 IPR003593 AAA+ ATPase domain YPN_2859 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2860 IPR003675 CAAX amino terminal protease YPN_2861 IPR005886 UDP-glucose 4-epimerase GalE YPN_2861 IPR016040 NAD(P)-binding domain YPN_2861 IPR036291 YPN_2861 YPN_2862 IPR001937 Galactose-1-phosphate uridyl transferase, class I YPN_2862 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YPN_2862 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YPN_2862 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YPN_2862 IPR036265 YPN_2862 YPN_2863 IPR000705 Galactokinase YPN_2863 IPR006203 GHMP kinase, ATP-binding, conserved site YPN_2863 IPR006204 GHMP kinase N-terminal domain YPN_2863 IPR006206 Mevalonate/galactokinase YPN_2863 IPR013750 GHMP kinase, C-terminal domain YPN_2863 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_2863 IPR019539 Galactokinase galactose-binding domain YPN_2863 IPR019741 Galactokinase, conserved site YPN_2863 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_2863 IPR022963 Galactokinase, bacterial YPN_2863 IPR036554 YPN_2863 YPN_2865 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPN_2865 IPR011013 Galactose mutarotase-like domain YPN_2865 IPR013458 Aldose 1-epimerase, bacterial YPN_2865 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPN_2865 IPR015443 Aldose 1-epimerase YPN_2865 IPR018052 Aldose 1-epimerase, conserved site YPN_2866 IPR011690 Phosphate-starvation-induced PsiF repeat YPN_2867 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPN_2867 IPR005952 Phosphoglycerate mutase 1 YPN_2867 IPR013078 Histidine phosphatase superfamily, clade-1 YPN_2867 IPR029033 Histidine phosphatase superfamily YPN_2868 IPR006218 DAHP synthetase I/KDSA YPN_2868 IPR006219 DHAP synthase, class 1 YPN_2868 IPR013785 Aldolase-type TIM barrel YPN_2869 IPR002524 Cation efflux protein YPN_2869 IPR023500 Zinc transporter ZitB YPN_2869 IPR027469 Cation efflux protein transmembrane domain YPN_2869 IPR036837 YPN_2869 YPN_2870 IPR006419 Nicotinamide mononucleotide transporter PnuC YPN_2871 IPR003473 Quinolinate synthetase A YPN_2871 IPR023513 Quinolinate synthase A, type 1 YPN_2871 IPR036094 YPN_2871 YPN_2872 IPR011990 Tetratricopeptide-like helical domain YPN_2872 IPR014162 Tol-Pal system, YbgF YPN_2872 IPR019734 Tetratricopeptide repeat YPN_2872 IPR032519 YPN_2872 YPN_2872 IPR034706 YPN_2872 YPN_2873 IPR006664 Outer membrane protein, bacterial YPN_2873 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_2873 IPR006690 Outer membrane protein, OmpA-like, conserved site YPN_2873 IPR014169 Peptidoglycan-associated lipoprotein YPN_2873 IPR036737 YPN_2873 YPN_2873 IPR039001 YPN_2873 YPN_2874 IPR007195 TolB, N-terminal YPN_2874 IPR011042 Six-bladed beta-propeller, TolB-like YPN_2874 IPR011659 WD40-like Beta Propeller YPN_2874 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB YPN_2874 IPR036752 YPN_2874 YPN_2875 IPR014161 Tol-Pal system, TolA YPN_2876 IPR003400 Biopolymer transport protein ExbD/TolR YPN_2876 IPR014168 Biopolymer transport, TolR YPN_2877 IPR002898 MotA/TolQ/ExbB proton channel YPN_2877 IPR014163 Tol-Pal system, TolQ YPN_2878 IPR006683 Thioesterase superfamily YPN_2878 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPN_2878 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase YPN_2878 IPR029069 HotDog domain YPN_2879 IPR011846 Cyd operon protein YbgE YPN_2880 IPR003317 Cytochrome d ubiquinol oxidase, subunit II YPN_2881 IPR002585 Cytochrome d ubiquinol oxidase, subunit I YPN_2882 IPR003781 CoA-binding YPN_2882 IPR005810 Succinyl-CoA ligase, alpha subunit YPN_2882 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPN_2882 IPR016102 Succinyl-CoA synthetase-like YPN_2882 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPN_2882 IPR033847 YPN_2882 YPN_2882 IPR036291 YPN_2882 YPN_2883 IPR005809 Succinyl-CoA synthetase, beta subunit YPN_2883 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPN_2883 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YPN_2883 IPR013815 ATP-grasp fold, subdomain 1 YPN_2883 IPR016102 Succinyl-CoA synthetase-like YPN_2883 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YPN_2884 IPR000089 Biotin/lipoyl attachment YPN_2884 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPN_2884 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPN_2884 IPR004167 E3 binding YPN_2884 IPR006255 Dihydrolipoamide succinyltransferase YPN_2884 IPR011053 Single hybrid motif YPN_2884 IPR023213 Chloramphenicol acetyltransferase-like domain YPN_2884 IPR036625 YPN_2884 YPN_2885 IPR001017 Dehydrogenase, E1 component YPN_2885 IPR005475 Transketolase-like, pyrimidine-binding domain YPN_2885 IPR011603 2-oxoglutarate dehydrogenase E1 component YPN_2885 IPR029061 Thiamin diphosphate-binding fold YPN_2885 IPR031717 YPN_2885 YPN_2885 IPR032106 YPN_2885 YPN_2886 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPN_2886 IPR009051 Alpha-helical ferredoxin YPN_2886 IPR012675 Beta-grasp domain YPN_2886 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_2886 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPN_2886 IPR036010 YPN_2886 YPN_2887 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPN_2887 IPR003953 FAD binding domain YPN_2887 IPR011281 Succinate dehydrogenase, flavoprotein subunit YPN_2887 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPN_2887 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPN_2887 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPN_2887 IPR036188 YPN_2887 YPN_2887 IPR037099 YPN_2887 YPN_2888 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YPN_2888 IPR034804 YPN_2888 YPN_2889 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit YPN_2889 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit YPN_2889 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site YPN_2889 IPR034804 YPN_2889 YPN_2890 IPR002020 Citrate synthase-like YPN_2890 IPR010953 Citrate synthase, type I YPN_2890 IPR016142 Citrate synthase-like, large alpha subdomain YPN_2890 IPR016143 Citrate synthase-like, small alpha subdomain YPN_2890 IPR019810 Citrate synthase active site YPN_2890 IPR024176 Citrate synthase, bacterial-type YPN_2890 IPR036969 YPN_2890 YPN_2891 IPR000740 GrpE nucleotide exchange factor YPN_2891 IPR009012 GrpE nucleotide exchange factor, head YPN_2891 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPN_2892 IPR002504 Inorganic polyphosphate/ATP-NAD kinase YPN_2892 IPR016064 ATP-NAD kinase-like domain YPN_2892 IPR017437 ATP-NAD kinase, PpnK-type, all-beta YPN_2892 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 YPN_2893 IPR003395 RecF/RecN/SMC, N-terminal YPN_2893 IPR004604 DNA recombination/repair protein RecN YPN_2893 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2894 IPR007450 Lipoprotein SmpA/OmlA YPN_2894 IPR026592 Outer membrane protein assembly factor BamE YPN_2894 IPR037873 YPN_2894 YPN_2895 IPR005346 RnfH protein YPN_2895 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPN_2895 IPR037021 YPN_2895 YPN_2896 IPR005031 Streptomyces cyclase/dehydrase YPN_2896 IPR023393 START-like domain YPN_2897 IPR000037 SsrA-binding protein YPN_2897 IPR020081 SsrA-binding protein, conserved site YPN_2897 IPR023620 Small protein B YPN_2898 IPR002686 Transposase IS200-like YPN_2898 IPR036515 YPN_2898 YPN_2899 IPR002104 Integrase, catalytic YPN_2899 IPR010998 Integrase, Lambda-type, N-terminal YPN_2899 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_2899 IPR013762 Integrase-like, catalytic core YPN_2899 IPR025166 Domain of unknown function DUF4102 YPN_2899 IPR038488 YPN_2899 YPN_2900 IPR025382 Domain of unknown function DUF4297 YPN_2904 IPR010998 Integrase, Lambda-type, N-terminal YPN_2904 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_2904 IPR013762 Integrase-like, catalytic core YPN_2904 IPR024456 Integrase catalytic domain, putative YPN_2904 IPR024457 Putative integrase, N-terminal YPN_2905 IPR010260 Bacteriophage P4, Orf88 YPN_2906 IPR018880 Bacteriophage P4, Ash protein YPN_2907 IPR006171 Toprim domain YPN_2907 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YPN_2908 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2909 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2909 IPR014057 Addiction module antidote protein, HI1420 YPN_2910 IPR009241 Addiction module killer protein YPN_2910 IPR014056 Addiction module killer protein, predicted YPN_2911 IPR038488 YPN_2911 YPN_2912 IPR001584 Integrase, catalytic core YPN_2912 IPR006120 Resolvase, HTH domain YPN_2912 IPR009057 Homeodomain-like YPN_2912 IPR012337 Ribonuclease H-like domain YPN_2913 IPR001270 ClpA/B family YPN_2913 IPR002611 IstB-like ATP-binding protein YPN_2913 IPR003593 AAA+ ATPase domain YPN_2913 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2913 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_2914 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_2915 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin YPN_2915 IPR038271 YPN_2915 YPN_2916 IPR006054 DNA polymerase III, epsilon subunit YPN_2916 IPR006309 DNA polymerase 3, epsilon subunit YPN_2916 IPR012337 Ribonuclease H-like domain YPN_2916 IPR013520 Exonuclease, RNase T/DNA polymerase III YPN_2916 IPR036397 YPN_2916 YPN_2917 IPR002156 Ribonuclease H domain YPN_2917 IPR012337 Ribonuclease H-like domain YPN_2917 IPR022892 Ribonuclease H YPN_2917 IPR036397 YPN_2917 YPN_2918 IPR013216 Methyltransferase type 11 YPN_2918 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2919 IPR001279 Beta-lactamase-like YPN_2919 IPR017782 Hydroxyacylglutathione hydrolase YPN_2919 IPR032282 YPN_2919 YPN_2919 IPR036866 YPN_2919 YPN_2920 IPR000189 Prokaryotic transglycosylase, active site YPN_2920 IPR008258 Lytic transglycosylase-like SLT domain YPN_2920 IPR018392 LysM domain YPN_2920 IPR023346 Lysozyme-like domain YPN_2920 IPR036779 YPN_2920 YPN_2921 IPR005135 Endonuclease/exonuclease/phosphatase YPN_2921 IPR036691 YPN_2921 YPN_2923 IPR018170 Aldo/keto reductase, conserved site YPN_2923 IPR020471 Aldo/keto reductase subgroup YPN_2923 IPR023210 NADP-dependent oxidoreductase domain YPN_2923 IPR036812 YPN_2923 YPN_2925 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPN_2925 IPR006543 Histidinol-phosphate phosphatase YPN_2925 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPN_2925 IPR023214 HAD-like domain YPN_2925 IPR036412 YPN_2925 YPN_2926 IPR003439 ABC transporter-like YPN_2926 IPR003593 AAA+ ATPase domain YPN_2926 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YPN_2926 IPR017871 ABC transporter, conserved site YPN_2926 IPR018449 NIL domain YPN_2926 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2927 IPR000515 MetI-like domain YPN_2927 IPR035906 YPN_2927 YPN_2928 IPR004872 Lipoprotein NlpA family YPN_2929 IPR030852 YPN_2929 YPN_2930 IPR023368 Uncharacterised protein family UPF0066, conserved site YPN_2930 IPR023370 TsaA-like domain YPN_2930 IPR036413 YPN_2930 YPN_2930 IPR036414 YPN_2930 YPN_2931 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPN_2931 IPR002316 Proline-tRNA ligase, class IIa YPN_2931 IPR004154 Anticodon-binding YPN_2931 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YPN_2931 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPN_2931 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YPN_2931 IPR036621 YPN_2931 YPN_2931 IPR036754 YPN_2931 YPN_2932 IPR007298 Copper resistance lipoprotein NlpE YPN_2932 IPR033450 YPN_2932 YPN_2932 IPR038139 YPN_2932 YPN_2933 IPR000352 Peptide chain release factor class I/class II YPN_2934 IPR009822 YaeQ YPN_2934 IPR011335 Restriction endonuclease type II-like YPN_2934 IPR038590 YPN_2934 YPN_2935 IPR009624 Uncharacterised protein family UPF0253 YPN_2936 IPR009778 Modulator of Rho-dependent transcription termination YPN_2936 IPR023534 Rof/RNase P-like YPN_2936 IPR038626 YPN_2936 YPN_2937 IPR008168 Cytochrome c, class IC YPN_2937 IPR009056 Cytochrome c-like domain YPN_2937 IPR036909 YPN_2937 YPN_2938 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YPN_2938 IPR012094 Lysidine-tRNA(Ile) synthetase YPN_2938 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal YPN_2938 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YPN_2938 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_2938 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain YPN_2939 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPN_2939 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPN_2940 IPR001095 Acetyl-CoA carboxylase, alpha subunit YPN_2940 IPR029045 ClpP/crotonase-like domain YPN_2941 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPN_2941 IPR004013 PHP, C-terminal YPN_2941 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPN_2941 IPR004805 DNA polymerase III, alpha subunit YPN_2941 IPR011708 Bacterial DNA polymerase III, alpha subunit YPN_2941 IPR016195 Polymerase/histidinol phosphatase-like YPN_2941 IPR029460 DNA polymerase, helix-hairpin-helix motif YPN_2942 IPR012337 Ribonuclease H-like domain YPN_2942 IPR022898 Ribonuclease HII YPN_2942 IPR024567 Ribonuclease HII/HIII domain YPN_2942 IPR036397 YPN_2942 YPN_2943 IPR003835 Glycosyl transferase, family 19 YPN_2944 IPR001451 Bacterial transferase hexapeptide repeat YPN_2944 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YPN_2944 IPR011004 Trimeric LpxA-like YPN_2944 IPR018357 Hexapeptide transferase, conserved site YPN_2944 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal YPN_2944 IPR037157 YPN_2944 YPN_2945 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPN_2945 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPN_2945 IPR029069 HotDog domain YPN_2946 IPR001451 Bacterial transferase hexapeptide repeat YPN_2946 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YPN_2946 IPR011004 Trimeric LpxA-like YPN_2946 IPR018357 Hexapeptide transferase, conserved site YPN_2946 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YPN_2947 IPR005632 Chaperone protein Skp YPN_2947 IPR024930 Skp domain YPN_2948 IPR000184 Bacterial surface antigen (D15) YPN_2948 IPR010827 Surface antigen variable number YPN_2948 IPR023707 Outer membrane protein assembly factor BamA YPN_2949 IPR001478 PDZ domain YPN_2949 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YPN_2949 IPR008915 Peptidase M50 YPN_2949 IPR036034 YPN_2949 YPN_2950 IPR000374 Phosphatidate cytidylyltransferase YPN_2951 IPR001441 Decaprenyl diphosphate synthase-like YPN_2951 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YPN_2951 IPR036424 YPN_2951 YPN_2952 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPN_2952 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YPN_2952 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YPN_2952 IPR026877 DXP reductoisomerase C-terminal domain YPN_2952 IPR036169 YPN_2952 YPN_2952 IPR036291 YPN_2952 YPN_2953 IPR002661 Ribosome recycling factor YPN_2953 IPR023584 Ribosome recycling factor domain YPN_2953 IPR036191 YPN_2953 YPN_2954 IPR001048 Aspartate/glutamate/uridylate kinase YPN_2954 IPR011817 Uridylate kinase YPN_2954 IPR015963 Uridylate kinase, bacteria YPN_2954 IPR036393 YPN_2954 YPN_2956 IPR001816 Translation elongation factor EFTs/EF1B YPN_2956 IPR009060 UBA-like YPN_2956 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPN_2956 IPR018101 Translation elongation factor Ts, conserved site YPN_2956 IPR036402 YPN_2956 YPN_2957 IPR001865 Ribosomal protein S2 YPN_2957 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YPN_2957 IPR018130 Ribosomal protein S2, conserved site YPN_2957 IPR023591 Ribosomal protein S2, flavodoxin-like domain YPN_2958 IPR000994 Peptidase M24, structural domain YPN_2958 IPR001714 Peptidase M24, methionine aminopeptidase YPN_2958 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPN_2958 IPR036005 YPN_2958 YPN_2959 IPR002912 ACT domain YPN_2959 IPR002934 Nucleotidyl transferase domain YPN_2959 IPR003607 HD/PDEase domain YPN_2959 IPR006674 HD domain YPN_2959 IPR010043 Protein-PII uridylyltransferase YPN_2959 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPN_2960 IPR001451 Bacterial transferase hexapeptide repeat YPN_2960 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YPN_2960 IPR011004 Trimeric LpxA-like YPN_2960 IPR018357 Hexapeptide transferase, conserved site YPN_2960 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YPN_2960 IPR037133 YPN_2960 YPN_2961 IPR002686 Transposase IS200-like YPN_2961 IPR036515 YPN_2961 YPN_2962 IPR020911 Uncharacterised protein family UPF0325 YPN_2963 IPR001094 Flavodoxin YPN_2963 IPR008254 Flavodoxin/nitric oxide synthase YPN_2963 IPR029039 Flavoprotein-like YPN_2964 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPN_2964 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPN_2964 IPR020103 Pseudouridine synthase, catalytic domain YPN_2965 IPR007384 Protein of unknown function UCP006257 YPN_2965 IPR023376 YqcC-like domain YPN_2965 IPR036814 YPN_2965 YPN_2966 IPR002686 Transposase IS200-like YPN_2966 IPR036515 YPN_2966 YPN_2967 IPR009948 Syd YPN_2967 IPR038228 YPN_2967 YPN_2968 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YPN_2968 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YPN_2968 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YPN_2969 IPR021826 Protein of unknown function DUF3412 YPN_2969 IPR027820 Domain of unknown function DUF4478 YPN_2969 IPR031100 YPN_2969 YPN_2969 IPR037153 YPN_2969 YPN_2970 IPR002421 5'-3' exonuclease, N-terminal YPN_2970 IPR008918 Helix-hairpin-helix motif, class 2 YPN_2970 IPR020045 5'-3' exonuclease, C-terminal domain YPN_2970 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPN_2970 IPR022895 Flap endonuclease Xni YPN_2970 IPR029060 PIN domain-like YPN_2970 IPR036279 YPN_2970 YPN_2971 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPN_2971 IPR011224 Ribosomal RNA large subunit methyltransferase M YPN_2971 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_2972 IPR006696 Protein of unknown function DUF423 YPN_2973 IPR000847 Transcription regulator HTH, LysR YPN_2973 IPR005119 LysR, substrate-binding YPN_2973 IPR036388 YPN_2973 YPN_2973 IPR036390 YPN_2973 YPN_2974 IPR000192 Aminotransferase class V domain YPN_2974 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_2974 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_2974 IPR015424 Pyridoxal phosphate-dependent transferase YPN_2974 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPN_2974 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YPN_2975 IPR003808 Fe-S metabolism associated domain, SufE-like YPN_2975 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPN_2976 IPR000594 UBA/THIF-type NAD/FAD binding fold YPN_2976 IPR035985 YPN_2976 YPN_2977 IPR005300 Lytic transglycosylase MltA YPN_2977 IPR010611 3D domain YPN_2977 IPR026044 Membrane-bound lytic murein transglycosylase A YPN_2977 IPR036908 YPN_2977 YPN_2978 IPR002508 Cell wall hydrolase/autolysin, catalytic YPN_2978 IPR021731 AMIN domain YPN_2979 IPR000182 GNAT domain YPN_2979 IPR001048 Aspartate/glutamate/uridylate kinase YPN_2979 IPR010167 Amino-acid N-acetyltransferase (ArgA) YPN_2979 IPR016181 Acyl-CoA N-acyltransferase YPN_2979 IPR036393 YPN_2979 YPN_2980 IPR006344 Exodeoxyribonuclease V, alpha subunit YPN_2980 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2980 IPR027785 UvrD-like helicase C-terminal domain YPN_2981 IPR004586 Exodeoxyribonuclease V, beta subunit YPN_2981 IPR011335 Restriction endonuclease type II-like YPN_2981 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPN_2981 IPR014017 DNA helicase, UvrD-like, C-terminal YPN_2981 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2981 IPR034739 YPN_2981 YPN_2982 IPR001431 Peptidase M16, zinc-binding site YPN_2982 IPR007863 Peptidase M16, C-terminal domain YPN_2982 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPN_2982 IPR011765 Peptidase M16, N-terminal YPN_2982 IPR032632 YPN_2982 YPN_2983 IPR006697 Exodeoxyribonuclease V, gamma subunit YPN_2983 IPR011335 Restriction endonuclease type II-like YPN_2983 IPR013986 DExx box DNA helicase domain YPN_2983 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_2984 IPR012902 Prokaryotic N-terminal methylation site YPN_2984 IPR022204 Prepilin peptidase dependent protein C YPN_2985 IPR019652 Protein of unknown function DUF2509 YPN_2986 IPR012902 Prokaryotic N-terminal methylation site YPN_2986 IPR016419 Prepilin peptidase-dependent protein B, predicted YPN_2987 IPR012902 Prokaryotic N-terminal methylation site YPN_2988 IPR000398 Thymidylate synthase YPN_2988 IPR020940 Thymidylate synthase, active site YPN_2988 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YPN_2988 IPR036926 YPN_2988 YPN_2989 IPR001640 Prolipoprotein diacylglyceryl transferase YPN_2990 IPR000121 PEP-utilising enzyme, C-terminal YPN_2990 IPR003018 GAF domain YPN_2990 IPR006318 Phosphoenolpyruvate-utilising enzyme YPN_2990 IPR008279 PEP-utilising enzyme, mobile domain YPN_2990 IPR008731 Phosphotransferase system, enzyme I N-terminal YPN_2990 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_2990 IPR018274 PEP-utilising enzyme, active site YPN_2990 IPR023151 PEP-utilising enzyme, conserved site YPN_2990 IPR029016 GAF domain-like YPN_2990 IPR036618 YPN_2990 YPN_2990 IPR036637 YPN_2990 YPN_2991 IPR000086 NUDIX hydrolase domain YPN_2991 IPR015797 NUDIX hydrolase domain-like YPN_2991 IPR020084 NUDIX hydrolase, conserved site YPN_2991 IPR020476 NUDIX hydrolase YPN_2991 IPR022927 RNA pyrophosphohydrolase RppH YPN_2992 IPR004230 DNA mismatch repair protein MutH YPN_2992 IPR011335 Restriction endonuclease type II-like YPN_2992 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YPN_2992 IPR037057 YPN_2992 YPN_2993 IPR023210 NADP-dependent oxidoreductase domain YPN_2993 IPR036812 YPN_2993 YPN_2995 IPR011701 Major facilitator superfamily YPN_2995 IPR023727 Lysophospholipid transporter LplT YPN_2995 IPR036259 YPN_2995 YPN_2996 IPR000873 AMP-dependent synthetase/ligase YPN_2996 IPR002123 Phospholipid/glycerol acyltransferase YPN_2996 IPR020845 AMP-binding, conserved site YPN_2996 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas YPN_2996 IPR025110 AMP-binding enzyme C-terminal domain YPN_2998 IPR006656 Molybdopterin oxidoreductase YPN_2998 IPR006657 Molydopterin dinucleotide-binding domain YPN_2998 IPR009010 Aspartate decarboxylase-like domain YPN_2999 IPR000843 Transcription regulator HTH, LacI YPN_2999 IPR010982 Lambda repressor-like, DNA-binding domain YPN_2999 IPR028082 Periplasmic binding protein-like I YPN_3000 IPR000183 Ornithine/DAP/Arg decarboxylase YPN_3000 IPR002986 Diaminopimelate decarboxylase, LysA YPN_3000 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPN_3000 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPN_3000 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPN_3000 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPN_3000 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPN_3000 IPR029066 PLP-binding barrel YPN_3001 IPR000847 Transcription regulator HTH, LysR YPN_3001 IPR005119 LysR, substrate-binding YPN_3001 IPR036388 YPN_3001 YPN_3001 IPR036390 YPN_3001 YPN_3002 IPR011701 Major facilitator superfamily YPN_3002 IPR036259 YPN_3002 YPN_3003 IPR000847 Transcription regulator HTH, LysR YPN_3003 IPR005119 LysR, substrate-binding YPN_3003 IPR036388 YPN_3003 YPN_3003 IPR036390 YPN_3003 YPN_3004 IPR001279 Beta-lactamase-like YPN_3004 IPR036866 YPN_3004 YPN_3005 IPR001853 DSBA-like thioredoxin domain YPN_3005 IPR036249 YPN_3005 YPN_3006 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPN_3006 IPR003660 HAMP linker domain YPN_3006 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_3006 IPR004090 Chemotaxis methyl-accepting receptor YPN_3006 IPR035440 YPN_3006 YPN_3008 IPR001867 Signal transduction response regulator, C-terminal YPN_3008 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3008 IPR036388 YPN_3008 YPN_3009 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPN_3009 IPR038432 YPN_3009 YPN_3010 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPN_3010 IPR010627 Peptidase A24A, N-terminal YPN_3010 IPR014032 Peptidase A24A, prepilin type IV, bacterial YPN_3012 IPR007812 Type II secretion system protein L YPN_3012 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YPN_3012 IPR025691 GspL periplasmic domain YPN_3013 IPR005628 General secretion pathway protein K YPN_3013 IPR038072 YPN_3013 YPN_3014 IPR010055 Type II secretion system protein J YPN_3014 IPR012902 Prokaryotic N-terminal methylation site YPN_3015 IPR003413 Type II secretion system protein I domain YPN_3015 IPR010052 Type II secretion system protein I YPN_3016 IPR002416 Type II secretion system protein H YPN_3016 IPR012902 Prokaryotic N-terminal methylation site YPN_3017 IPR000983 Bacterial general secretion pathway protein G-type pilin YPN_3017 IPR010054 General secretion pathway protein G YPN_3017 IPR012902 Prokaryotic N-terminal methylation site YPN_3017 IPR013545 Type II secretion system protein G YPN_3018 IPR001992 Type II secretion system conserved site YPN_3018 IPR003004 GspF/PilC family YPN_3018 IPR018076 Type II secretion system F domain YPN_3019 IPR001482 Type II secretion system protein E YPN_3019 IPR003593 AAA+ ATPase domain YPN_3019 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3020 IPR001775 GspD/PilQ family YPN_3020 IPR004845 Type II secretion system GspD, conserved site YPN_3020 IPR004846 Type II/III secretion system YPN_3020 IPR005644 NolW-like YPN_3020 IPR013356 Type II secretion system GspD YPN_3020 IPR038591 YPN_3020 YPN_3021 IPR024961 YPN_3021 YPN_3022 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3022 IPR036388 YPN_3022 YPN_3023 IPR001765 Carbonic anhydrase YPN_3023 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPN_3023 IPR036874 YPN_3023 YPN_3025 IPR031605 YPN_3025 YPN_3026 IPR005546 Autotransporter beta-domain YPN_3026 IPR006315 Outer membrane autotransporter barrel YPN_3026 IPR036709 YPN_3026 YPN_3027 IPR003159 Polysaccharide lyase family 8, central domain YPN_3027 IPR004103 Polysaccharide lyase family 8, C-terminal YPN_3027 IPR008929 Chondroitin AC/alginate lyase YPN_3027 IPR008979 Galactose-binding domain-like YPN_3027 IPR011013 Galactose mutarotase-like domain YPN_3027 IPR011071 Polysaccharide lyase family 8-like, C-terminal YPN_3027 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPN_3027 IPR015176 Lyase, N-terminal YPN_3027 IPR015177 Lyase, catalytic YPN_3027 IPR024200 Chondroitin sulfate ABC endolyase YPN_3029 IPR001270 ClpA/B family YPN_3029 IPR002611 IstB-like ATP-binding protein YPN_3029 IPR003593 AAA+ ATPase domain YPN_3029 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3029 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3030 IPR001584 Integrase, catalytic core YPN_3030 IPR006120 Resolvase, HTH domain YPN_3030 IPR009057 Homeodomain-like YPN_3030 IPR012337 Ribonuclease H-like domain YPN_3031 IPR002686 Transposase IS200-like YPN_3031 IPR036515 YPN_3031 YPN_3032 IPR000917 Sulfatase YPN_3032 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_3032 IPR017850 Alkaline-phosphatase-like, core domain YPN_3033 IPR001034 HTH DeoR N-terminal domain YPN_3033 IPR014036 DeoR C-terminal sensor domain YPN_3033 IPR036388 YPN_3033 YPN_3033 IPR036390 YPN_3033 YPN_3033 IPR037171 YPN_3033 YPN_3034 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ YPN_3034 IPR013785 Aldolase-type TIM barrel YPN_3035 IPR001347 Sugar isomerase (SIS) YPN_3035 IPR014180 Sugar isomerase, AgaS YPN_3036 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPN_3036 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPN_3036 IPR036667 YPN_3036 YPN_3037 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YPN_3038 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPN_3039 IPR004701 Phosphotransferase system, mannose-type IIA component YPN_3039 IPR036662 YPN_3039 YPN_3040 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPN_3040 IPR006680 Amidohydrolase 1 YPN_3040 IPR011059 Metal-dependent hydrolase, composite domain YPN_3040 IPR032466 YPN_3040 YPN_3041 IPR002347 Glucose/ribitol dehydrogenase YPN_3041 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPN_3041 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPN_3041 IPR036291 YPN_3041 YPN_3042 IPR008928 Six-hairpin glycosidase-like YPN_3042 IPR010905 Glycosyl hydrolase, family 88 YPN_3042 IPR012341 Six-hairpin glycosidase YPN_3043 IPR007197 Radical SAM YPN_3043 IPR013785 Aldolase-type TIM barrel YPN_3043 IPR023885 4Fe4S-binding SPASM domain YPN_3044 IPR000917 Sulfatase YPN_3044 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_3044 IPR017850 Alkaline-phosphatase-like, core domain YPN_3044 IPR024607 Sulfatase, conserved site YPN_3045 IPR016624 Uncharacterised conserved protein UCP014753 YPN_3046 IPR000771 Ketose-bisphosphate aldolase, class-II YPN_3046 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YPN_3046 IPR013785 Aldolase-type TIM barrel YPN_3047 IPR002818 ThiJ/PfpI YPN_3047 IPR029062 Class I glutamine amidotransferase-like YPN_3048 IPR000843 Transcription regulator HTH, LacI YPN_3048 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3048 IPR028082 Periplasmic binding protein-like I YPN_3049 IPR011701 Major facilitator superfamily YPN_3049 IPR036259 YPN_3049 YPN_3050 IPR000322 Glycoside hydrolase, family 31 YPN_3050 IPR011013 Galactose mutarotase-like domain YPN_3050 IPR013780 Glycosyl hydrolase, family 13, all-beta YPN_3050 IPR017853 Glycoside hydrolase, superfamily YPN_3050 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPN_3050 IPR033403 YPN_3050 YPN_3051 IPR000843 Transcription regulator HTH, LacI YPN_3051 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3051 IPR028082 Periplasmic binding protein-like I YPN_3052 IPR003192 Porin, LamB type YPN_3052 IPR023738 Maltoporin YPN_3052 IPR036998 YPN_3052 YPN_3053 IPR001996 Phosphotransferase system, IIB component, type 1 YPN_3053 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPN_3053 IPR036878 YPN_3053 YPN_3054 IPR003476 Glycoside hydrolase, family 42 YPN_3054 IPR013529 Glycoside hydrolase, family 42, N-terminal YPN_3054 IPR013738 Beta-galactosidase trimerisation YPN_3054 IPR013739 Beta-galactosidase C-terminal YPN_3054 IPR013780 Glycosyl hydrolase, family 13, all-beta YPN_3054 IPR017853 Glycoside hydrolase, superfamily YPN_3054 IPR029062 Class I glutamine amidotransferase-like YPN_3055 IPR011683 Glycosyl hydrolase family 53 YPN_3055 IPR017853 Glycoside hydrolase, superfamily YPN_3056 IPR000515 MetI-like domain YPN_3056 IPR035906 YPN_3056 YPN_3057 IPR000515 MetI-like domain YPN_3057 IPR035906 YPN_3057 YPN_3058 IPR006059 Bacterial extracellular solute-binding, family 1 YPN_3058 IPR006060 Maltose binding protein YPN_3059 IPR003439 ABC transporter-like YPN_3059 IPR003593 AAA+ ATPase domain YPN_3059 IPR008995 Molybdate/tungstate binding, C-terminal YPN_3059 IPR013611 Transport-associated OB, type 2 YPN_3059 IPR017871 ABC transporter, conserved site YPN_3059 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3060 IPR003439 ABC transporter-like YPN_3060 IPR003593 AAA+ ATPase domain YPN_3060 IPR017871 ABC transporter, conserved site YPN_3060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3061 IPR001851 ABC transporter, permease YPN_3062 IPR025997 Periplasmic binding protein domain YPN_3062 IPR028082 Periplasmic binding protein-like I YPN_3064 IPR024453 YPN_3064 YPN_3064 IPR038765 YPN_3064 YPN_3065 IPR005149 Transcription regulator PadR N-terminal YPN_3065 IPR036388 YPN_3065 YPN_3065 IPR036390 YPN_3065 YPN_3066 IPR024476 Protein of unknown function DUF3861 YPN_3067 IPR008727 PAAR motif YPN_3069 IPR021488 Protein of unknown function DUF3142 YPN_3071 IPR025983 Cysteine-rich CPCC domain YPN_3072 IPR008727 PAAR motif YPN_3072 IPR016128 Pyosin/cloacin translocation domain YPN_3072 IPR036302 YPN_3072 YPN_3073 IPR003812 Fido domain YPN_3073 IPR036597 YPN_3073 YPN_3077 IPR009061 DNA binding domain, putative YPN_3077 IPR010260 Bacteriophage P4, Orf88 YPN_3078 IPR009241 Addiction module killer protein YPN_3079 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YPN_3079 IPR006171 Toprim domain YPN_3079 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YPN_3079 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YPN_3079 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3079 IPR036388 YPN_3079 YPN_3079 IPR036390 YPN_3079 YPN_3080 IPR001387 Cro/C1-type helix-turn-helix domain YPN_3080 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3080 IPR022452 Zinc finger/helix-turn-helix protein, YgiT YPN_3080 IPR022453 Zinc finger, YgiT-type YPN_3080 IPR032758 YPN_3080 YPN_3081 IPR031451 YPN_3081 YPN_3081 IPR038493 YPN_3081 YPN_3082 IPR001387 Cro/C1-type helix-turn-helix domain YPN_3082 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3083 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YPN_3083 IPR035093 YPN_3083 YPN_3086 IPR002104 Integrase, catalytic YPN_3086 IPR010998 Integrase, Lambda-type, N-terminal YPN_3086 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_3086 IPR013762 Integrase-like, catalytic core YPN_3086 IPR025166 Domain of unknown function DUF4102 YPN_3086 IPR038488 YPN_3086 YPN_3087 IPR002313 Lysine-tRNA ligase, class II YPN_3087 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPN_3087 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPN_3087 IPR012340 Nucleic acid-binding, OB-fold YPN_3087 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPN_3087 IPR034762 YPN_3087 YPN_3088 IPR000352 Peptide chain release factor class I/class II YPN_3088 IPR004374 Peptide chain release factor 2 YPN_3088 IPR005139 Peptide chain release factor YPN_3089 IPR001667 DDH domain YPN_3089 IPR003156 DHHA1 domain YPN_3089 IPR004610 Bacterial RecJ exonuclease YPN_3089 IPR038763 YPN_3089 YPN_3090 IPR009094 Disulphide bond isomerase, DsbC, N-terminal YPN_3090 IPR012336 Thioredoxin-like fold YPN_3090 IPR017937 Thioredoxin, conserved site YPN_3090 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPN_3090 IPR036249 YPN_3090 YPN_3091 IPR002104 Integrase, catalytic YPN_3091 IPR004107 Integrase, SAM-like, N-terminal YPN_3091 IPR010998 Integrase, Lambda-type, N-terminal YPN_3091 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_3091 IPR011932 Tyrosine recombinase XerD YPN_3091 IPR013762 Integrase-like, catalytic core YPN_3091 IPR023009 Tyrosine recombinase XerC/XerD YPN_3092 IPR001226 Flavodoxin, conserved site YPN_3092 IPR008254 Flavodoxin/nitric oxide synthase YPN_3092 IPR010086 Flavodoxin, long chain YPN_3092 IPR029039 Flavoprotein-like YPN_3093 IPR010364 Uncharacterised protein family, inner membrane CreD YPN_3094 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3094 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_3094 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_3094 IPR029150 Sensory domain of two-component sensor kinase YPN_3094 IPR029151 Periplasmic sensor domain-like YPN_3094 IPR036097 YPN_3094 YPN_3094 IPR036890 YPN_3094 YPN_3095 IPR001789 Signal transduction response regulator, receiver domain YPN_3095 IPR001867 Signal transduction response regulator, C-terminal YPN_3095 IPR011006 CheY-like superfamily YPN_3095 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3095 IPR036388 YPN_3095 YPN_3096 IPR009883 Protein of unknown function DUF1434 YPN_3097 IPR005631 Flavinator of succinate dehydrogenase YPN_3097 IPR036714 YPN_3097 YPN_3098 IPR006222 Glycine cleavage T-protein, N-terminal YPN_3098 IPR017703 YgfZ/GcvT conserved site YPN_3098 IPR023758 tRNA-modifying protein YgfZ YPN_3098 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA YPN_3098 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPN_3099 IPR018681 Protein of unknown function DUF2165, transmembrane YPN_3100 IPR004254 Hly-III-related YPN_3100 IPR005744 HylII YPN_3102 IPR005594 YadA-like, C-terminal YPN_3102 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPN_3102 IPR008640 Head domain of trimeric autotransporter adhesin YPN_3102 IPR011049 Serralysin-like metalloprotease, C-terminal YPN_3103 IPR024311 Lipocalin-like domain YPN_3104 IPR003437 Glycine cleavage system P protein, homodimeric YPN_3104 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3104 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3104 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3104 IPR020581 Glycine cleavage system P protein YPN_3105 IPR002930 Glycine cleavage system H-protein YPN_3105 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPN_3105 IPR011053 Single hybrid motif YPN_3105 IPR017453 Glycine cleavage system H-protein, subgroup YPN_3105 IPR033753 YPN_3105 YPN_3106 IPR006222 Glycine cleavage T-protein, N-terminal YPN_3106 IPR006223 Glycine cleavage system T protein YPN_3106 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YPN_3106 IPR022903 Glycine cleavage system T protein, bacteria YPN_3106 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPN_3106 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA YPN_3106 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPN_3107 IPR002938 Monooxygenase, FAD-binding YPN_3107 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPN_3107 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPN_3107 IPR036188 YPN_3107 YPN_3108 IPR002938 Monooxygenase, FAD-binding YPN_3108 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPN_3108 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YPN_3108 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPN_3108 IPR036188 YPN_3108 YPN_3109 IPR000994 Peptidase M24, structural domain YPN_3109 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPN_3109 IPR001714 Peptidase M24, methionine aminopeptidase YPN_3109 IPR007865 Aminopeptidase P, N-terminal YPN_3109 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPN_3109 IPR036005 YPN_3109 YPN_3110 IPR011978 Uncharacterised protein family UPF0149 YPN_3110 IPR036255 YPN_3110 YPN_3111 IPR007838 Cell division protein ZapA-like YPN_3111 IPR023771 Cell division protein ZapA, eubacteria YPN_3111 IPR036192 YPN_3111 YPN_3112 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPN_3112 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain YPN_3112 IPR037171 YPN_3112 YPN_3113 IPR002912 ACT domain YPN_3113 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPN_3113 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPN_3113 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPN_3113 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPN_3113 IPR036291 YPN_3113 YPN_3114 IPR004788 Ribose 5-phosphate isomerase, type A YPN_3114 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPN_3114 IPR037171 YPN_3114 YPN_3115 IPR000847 Transcription regulator HTH, LysR YPN_3115 IPR005119 LysR, substrate-binding YPN_3115 IPR017685 Transcription regulator ArgP YPN_3115 IPR023490 Chromosome initiation inhibitor YPN_3115 IPR036388 YPN_3115 YPN_3115 IPR036390 YPN_3115 YPN_3116 IPR007497 Protein of unknown function DUF541 YPN_3117 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPN_3117 IPR004777 L-lysine exporter/arginine exporter YPN_3117 IPR023445 Arginine exporter protein ArgO, enterobacteria YPN_3118 IPR006685 Mechanosensitive ion channel MscS YPN_3118 IPR006686 Mechanosensitive ion channel MscS, conserved site YPN_3118 IPR008910 Conserved TM helix YPN_3118 IPR010920 Like-Sm (LSM) domain YPN_3118 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPN_3118 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPN_3118 IPR023408 YPN_3118 YPN_3119 IPR000771 Ketose-bisphosphate aldolase, class-II YPN_3119 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YPN_3119 IPR013785 Aldolase-type TIM barrel YPN_3120 IPR001576 Phosphoglycerate kinase YPN_3120 IPR015824 Phosphoglycerate kinase, N-terminal YPN_3120 IPR015911 Phosphoglycerate kinase, conserved site YPN_3120 IPR036043 YPN_3120 YPN_3121 IPR006422 D-erythrose-4-phosphate dehydrogenase YPN_3121 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPN_3121 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPN_3121 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPN_3121 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPN_3121 IPR036291 YPN_3121 YPN_3122 IPR002686 Transposase IS200-like YPN_3122 IPR036515 YPN_3122 YPN_3123 IPR005474 Transketolase, N-terminal YPN_3123 IPR005475 Transketolase-like, pyrimidine-binding domain YPN_3123 IPR005478 Transketolase, bacterial-like YPN_3123 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPN_3123 IPR020826 Transketolase binding site YPN_3123 IPR029061 Thiamin diphosphate-binding fold YPN_3123 IPR033248 YPN_3123 YPN_3124 IPR001915 Peptidase M48 YPN_3125 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPN_3125 IPR036922 YPN_3125 YPN_3126 IPR000183 Ornithine/DAP/Arg decarboxylase YPN_3126 IPR002985 Arginine decarboxylase YPN_3126 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPN_3126 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPN_3126 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPN_3126 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPN_3126 IPR029066 PLP-binding barrel YPN_3127 IPR002133 S-adenosylmethionine synthetase YPN_3127 IPR022628 S-adenosylmethionine synthetase, N-terminal YPN_3127 IPR022629 S-adenosylmethionine synthetase, central domain YPN_3127 IPR022630 S-adenosylmethionine synthetase, C-terminal YPN_3127 IPR022631 S-adenosylmethionine synthetase, conserved site YPN_3127 IPR022636 S-adenosylmethionine synthetase superfamily YPN_3128 IPR006640 Domain of unknown function SprT-like YPN_3128 IPR023483 Uncharacterised protein family SprT YPN_3128 IPR035240 YPN_3128 YPN_3129 IPR007346 Endonuclease I YPN_3131 IPR006700 Ribosomal RNA small subunit methyltransferase E YPN_3131 IPR015947 PUA-like domain YPN_3131 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_3131 IPR029028 Alpha/beta knot methyltransferases YPN_3132 IPR004215 Prokaryotic glutathione synthetase, N-terminal YPN_3132 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YPN_3132 IPR006284 Glutathione synthetase, prokaryotic YPN_3132 IPR013815 ATP-grasp fold, subdomain 1 YPN_3132 IPR016185 Pre-ATP-grasp domain YPN_3133 IPR003774 Protein of unknown function UPF0301 YPN_3134 IPR005227 Resolvase, holliday junction-type, YqgF-like YPN_3134 IPR006641 YqgF/RNase H-like domain YPN_3134 IPR012337 Ribonuclease H-like domain YPN_3134 IPR037027 YPN_3134 YPN_3135 IPR003010 Carbon-nitrogen hydrolase YPN_3135 IPR017755 N-carbamoylputrescine amidase YPN_3135 IPR036526 YPN_3135 YPN_3136 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YPN_3136 IPR017754 Agmatine deiminase YPN_3137 IPR001482 Type II secretion system protein E YPN_3137 IPR003593 AAA+ ATPase domain YPN_3137 IPR006321 Pilus retraction protein PilT YPN_3137 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3138 IPR001608 Alanine racemase, N-terminal YPN_3138 IPR011078 Uncharacterised protein family UPF0001 YPN_3138 IPR029066 PLP-binding barrel YPN_3139 IPR000304 Pyrroline-5-carboxylate reductase YPN_3139 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_3139 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPN_3139 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YPN_3139 IPR036291 YPN_3139 YPN_3140 IPR003425 Uncharacterised protein family Ycf19 YPN_3141 IPR003746 Protein of unknown function DUF167 YPN_3141 IPR005228 Conserved hypothetical protein CHP00251 YPN_3141 IPR036591 YPN_3141 YPN_3142 IPR002637 Ham1-like protein YPN_3142 IPR020922 Non-canonical purine NTP pyrophosphatase YPN_3142 IPR029001 Inosine triphosphate pyrophosphatase-like YPN_3143 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related YPN_3143 IPR006638 Elongator protein 3/MiaB/NifB YPN_3143 IPR007197 Radical SAM YPN_3143 IPR010723 HemN, C-terminal domain YPN_3143 IPR023404 Radical SAM, alpha/beta horseshoe YPN_3144 IPR011049 Serralysin-like metalloprotease, C-terminal YPN_3144 IPR020974 Peptidase C80, RTX cysteine protease domain YPN_3144 IPR038383 YPN_3144 YPN_3145 IPR021307 Protein of unknown function DUF2884 YPN_3146 IPR021307 Protein of unknown function DUF2884 YPN_3147 IPR012338 Beta-lactamase/transpeptidase-like YPN_3147 IPR015868 Glutaminase YPN_3148 IPR007416 Protein of unknown function DUF469 YPN_3149 IPR003358 tRNA (guanine-N-7) methyltransferase YPN_3149 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3150 IPR000445 Helix-hairpin-helix motif YPN_3150 IPR003265 HhH-GPD domain YPN_3150 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPN_3150 IPR004035 Endonuclease III, iron-sulphur binding site YPN_3150 IPR004036 Endonuclease III-like, conserved site-2 YPN_3150 IPR005760 A/G-specific adenine glycosylase MutY YPN_3150 IPR011257 DNA glycosylase YPN_3150 IPR015797 NUDIX hydrolase domain-like YPN_3150 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPN_3150 IPR029119 MutY, C-terminal YPN_3151 IPR007457 Fe(II) trafficking protein YggX YPN_3151 IPR036766 YPN_3151 YPN_3152 IPR000189 Prokaryotic transglycosylase, active site YPN_3152 IPR008258 Lytic transglycosylase-like SLT domain YPN_3152 IPR023346 Lysozyme-like domain YPN_3152 IPR023664 Murein transglycosylase-C YPN_3152 IPR024570 Murein transglycosylase-C, N-terminal YPN_3153 IPR002491 ABC transporter periplasmic binding domain YPN_3154 IPR000531 TonB-dependent receptor, beta-barrel YPN_3154 IPR010105 TonB-dependent siderophore receptor YPN_3154 IPR012910 TonB-dependent receptor, plug YPN_3154 IPR036942 YPN_3154 YPN_3154 IPR037066 YPN_3154 YPN_3155 IPR001851 ABC transporter, permease YPN_3156 IPR003439 ABC transporter-like YPN_3156 IPR003593 AAA+ ATPase domain YPN_3156 IPR017871 ABC transporter, conserved site YPN_3156 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3157 IPR025997 Periplasmic binding protein domain YPN_3157 IPR028082 Periplasmic binding protein-like I YPN_3158 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPN_3158 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPN_3158 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPN_3158 IPR011006 CheY-like superfamily YPN_3158 IPR011193 Ornithine/lysine/arginine decarboxylase YPN_3158 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3158 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3158 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3158 IPR027464 Ornithine decarboxylase, N-terminal domain YPN_3158 IPR027568 Ornithine decarboxylase SpeF YPN_3158 IPR036633 YPN_3158 YPN_3160 IPR002104 Integrase, catalytic YPN_3160 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_3160 IPR013762 Integrase-like, catalytic core YPN_3161 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPN_3162 IPR005063 Transposase, IS1 YPN_3163 IPR003220 InsA N-terminal domain YPN_3163 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPN_3165 IPR011055 Duplicated hybrid motif YPN_3165 IPR016047 Peptidase M23 YPN_3165 IPR023346 Lysozyme-like domain YPN_3166 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPN_3167 IPR003220 InsA N-terminal domain YPN_3167 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPN_3168 IPR011055 Duplicated hybrid motif YPN_3168 IPR023346 Lysozyme-like domain YPN_3169 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPN_3169 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPN_3169 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPN_3169 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPN_3169 IPR037026 YPN_3169 YPN_3170 IPR001270 ClpA/B family YPN_3170 IPR003593 AAA+ ATPase domain YPN_3170 IPR003959 ATPase, AAA-type, core YPN_3170 IPR017729 Type VI secretion system, ATPase ClpV1 YPN_3170 IPR018368 ClpA/B, conserved site 1 YPN_3170 IPR019489 Clp ATPase, C-terminal YPN_3170 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3170 IPR036628 YPN_3170 YPN_3171 IPR008514 Type VI secretion system effector, Hcp YPN_3171 IPR036624 YPN_3171 YPN_3172 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_3172 IPR036737 YPN_3172 YPN_3173 IPR017732 Type IV / VI secretion system, DotU YPN_3173 IPR038522 YPN_3173 YPN_3174 IPR010263 Protein of unknown function DUF876 YPN_3175 IPR010269 Protein of unknown function DUF877 YPN_3176 IPR008312 Uncharacterised conserved protein UCP028301 YPN_3178 IPR003220 InsA N-terminal domain YPN_3178 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPN_3181 IPR003675 CAAX amino terminal protease YPN_3182 IPR001690 Autoinducer synthesis protein YPN_3182 IPR016181 Acyl-CoA N-acyltransferase YPN_3182 IPR018311 Autoinducer synthesis, conserved site YPN_3183 IPR000792 Transcription regulator LuxR, C-terminal YPN_3183 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPN_3183 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3183 IPR036388 YPN_3183 YPN_3183 IPR036693 YPN_3183 YPN_3184 IPR010126 Esterase, PHB depolymerase YPN_3184 IPR029058 Alpha/Beta hydrolase fold YPN_3185 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal YPN_3185 IPR015889 Intradiol ring-cleavage dioxygenase, core YPN_3186 IPR011701 Major facilitator superfamily YPN_3186 IPR036259 YPN_3186 YPN_3187 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPN_3188 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPN_3188 IPR022770 Ferric iron reductase FhuF domain YPN_3189 IPR016181 Acyl-CoA N-acyltransferase YPN_3189 IPR019432 Siderophore biosynthesis protein, conserved domain YPN_3190 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPN_3190 IPR022770 Ferric iron reductase FhuF domain YPN_3191 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPN_3191 IPR036188 YPN_3191 YPN_3192 IPR000531 TonB-dependent receptor, beta-barrel YPN_3192 IPR010105 TonB-dependent siderophore receptor YPN_3192 IPR010917 TonB-dependent receptor, conserved site YPN_3192 IPR012910 TonB-dependent receptor, plug YPN_3192 IPR036942 YPN_3192 YPN_3192 IPR037066 YPN_3192 YPN_3193 IPR001927 Sodium:galactoside symporter YPN_3193 IPR036259 YPN_3193 YPN_3194 IPR009057 Homeodomain-like YPN_3194 IPR010921 Trp repressor/replication initiator YPN_3195 IPR001584 Integrase, catalytic core YPN_3195 IPR012337 Ribonuclease H-like domain YPN_3195 IPR025948 HTH-like domain YPN_3195 IPR036397 YPN_3195 YPN_3196 IPR001547 Glycoside hydrolase, family 5 YPN_3196 IPR017853 Glycoside hydrolase, superfamily YPN_3197 IPR000843 Transcription regulator HTH, LacI YPN_3197 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3197 IPR028082 Periplasmic binding protein-like I YPN_3198 IPR001898 Sodium/sulphate symporter YPN_3198 IPR031312 YPN_3198 YPN_3201 IPR001826 RHS protein YPN_3201 IPR006530 YD repeat YPN_3201 IPR022385 Rhs repeat-associated core YPN_3201 IPR031325 YPN_3201 YPN_3202 IPR011990 Tetratricopeptide-like helical domain YPN_3203 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPN_3203 IPR010609 Gp5, C-terminal YPN_3203 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPN_3203 IPR037026 YPN_3203 YPN_3204 IPR005546 Autotransporter beta-domain YPN_3204 IPR006315 Outer membrane autotransporter barrel YPN_3204 IPR011050 Pectin lyase fold/virulence factor YPN_3204 IPR012332 P22 tailspike C-terminal domain-like YPN_3204 IPR036709 YPN_3204 YPN_3205 IPR005546 Autotransporter beta-domain YPN_3205 IPR006315 Outer membrane autotransporter barrel YPN_3205 IPR011050 Pectin lyase fold/virulence factor YPN_3205 IPR012332 P22 tailspike C-terminal domain-like YPN_3205 IPR036709 YPN_3205 YPN_3207 IPR003474 Gluconate transporter YPN_3210 IPR003439 ABC transporter-like YPN_3210 IPR003593 AAA+ ATPase domain YPN_3210 IPR011527 ABC transporter type 1, transmembrane domain YPN_3210 IPR017871 ABC transporter, conserved site YPN_3210 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3210 IPR036640 YPN_3210 YPN_3211 IPR003439 ABC transporter-like YPN_3211 IPR003593 AAA+ ATPase domain YPN_3211 IPR011527 ABC transporter type 1, transmembrane domain YPN_3211 IPR017871 ABC transporter, conserved site YPN_3211 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3211 IPR036640 YPN_3211 YPN_3212 IPR011701 Major facilitator superfamily YPN_3212 IPR036259 YPN_3212 YPN_3213 IPR001031 Thioesterase YPN_3213 IPR029058 Alpha/Beta hydrolase fold YPN_3214 IPR000683 Oxidoreductase, N-terminal YPN_3214 IPR010091 Thiazolinyl imide reductase YPN_3214 IPR036291 YPN_3214 YPN_3215 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_3215 IPR036291 YPN_3215 YPN_3216 IPR000873 AMP-dependent synthetase/ligase YPN_3216 IPR001031 Thioesterase YPN_3216 IPR001242 Condensation domain YPN_3216 IPR006162 Phosphopantetheine attachment site YPN_3216 IPR009081 Acyl carrier protein-like YPN_3216 IPR010071 Amino acid adenylation domain YPN_3216 IPR013217 Methyltransferase type 12 YPN_3216 IPR020845 AMP-binding, conserved site YPN_3216 IPR023213 Chloramphenicol acetyltransferase-like domain YPN_3216 IPR029058 Alpha/Beta hydrolase fold YPN_3216 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3216 IPR036736 YPN_3216 YPN_3217 IPR000873 AMP-dependent synthetase/ligase YPN_3217 IPR009081 Acyl carrier protein-like YPN_3217 IPR010071 Amino acid adenylation domain YPN_3217 IPR020845 AMP-binding, conserved site YPN_3217 IPR029058 Alpha/Beta hydrolase fold YPN_3217 IPR036736 YPN_3217 YPN_3218 IPR000873 AMP-dependent synthetase/ligase YPN_3218 IPR001242 Condensation domain YPN_3218 IPR006162 Phosphopantetheine attachment site YPN_3218 IPR009081 Acyl carrier protein-like YPN_3218 IPR010071 Amino acid adenylation domain YPN_3218 IPR020845 AMP-binding, conserved site YPN_3218 IPR023213 Chloramphenicol acetyltransferase-like domain YPN_3218 IPR036736 YPN_3218 YPN_3219 IPR001270 ClpA/B family YPN_3219 IPR002611 IstB-like ATP-binding protein YPN_3219 IPR003593 AAA+ ATPase domain YPN_3219 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3219 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3220 IPR001584 Integrase, catalytic core YPN_3220 IPR006120 Resolvase, HTH domain YPN_3220 IPR009057 Homeodomain-like YPN_3220 IPR012337 Ribonuclease H-like domain YPN_3221 IPR000873 AMP-dependent synthetase/ligase YPN_3221 IPR009081 Acyl carrier protein-like YPN_3221 IPR014030 Beta-ketoacyl synthase, N-terminal YPN_3221 IPR014031 Beta-ketoacyl synthase, C-terminal YPN_3221 IPR016039 Thiolase-like YPN_3221 IPR018201 Beta-ketoacyl synthase, active site YPN_3221 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPN_3221 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPN_3221 IPR036736 YPN_3221 YPN_3222 IPR000531 TonB-dependent receptor, beta-barrel YPN_3222 IPR012910 TonB-dependent receptor, plug YPN_3222 IPR036942 YPN_3222 YPN_3223 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPN_3223 IPR002933 Peptidase M20 YPN_3223 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPN_3223 IPR011650 Peptidase M20, dimerisation domain YPN_3223 IPR036264 YPN_3223 YPN_3224 IPR004697 AbgT YPN_3225 IPR003591 Leucine-rich repeat, typical subtype YPN_3225 IPR029487 Novel E3 ligase domain YPN_3225 IPR032674 YPN_3225 YPN_3225 IPR032675 YPN_3225 YPN_3226 IPR032674 YPN_3226 YPN_3226 IPR032675 YPN_3226 YPN_3227 IPR029487 Novel E3 ligase domain YPN_3227 IPR032674 YPN_3227 YPN_3227 IPR032675 YPN_3227 YPN_3228 IPR005546 Autotransporter beta-domain YPN_3228 IPR006315 Outer membrane autotransporter barrel YPN_3228 IPR011050 Pectin lyase fold/virulence factor YPN_3228 IPR012332 P22 tailspike C-terminal domain-like YPN_3228 IPR024973 ESPR domain YPN_3228 IPR036709 YPN_3228 YPN_3230 IPR012927 ShET2 enterotoxin, N-terminal YPN_3231 IPR001036 Acriflavin resistance protein YPN_3231 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPN_3231 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPN_3232 IPR006143 RND efflux pump, membrane fusion protein YPN_3232 IPR032317 YPN_3232 YPN_3234 IPR000014 PAS domain YPN_3234 IPR000160 GGDEF domain YPN_3234 IPR001633 EAL domain YPN_3234 IPR007892 CHASE4 YPN_3234 IPR013767 PAS fold YPN_3234 IPR029787 Nucleotide cyclase YPN_3234 IPR035919 YPN_3234 YPN_3234 IPR035965 YPN_3234 YPN_3235 IPR001584 Integrase, catalytic core YPN_3235 IPR012337 Ribonuclease H-like domain YPN_3235 IPR025948 HTH-like domain YPN_3235 IPR036397 YPN_3235 YPN_3236 IPR009057 Homeodomain-like YPN_3236 IPR010921 Trp repressor/replication initiator YPN_3237 IPR000589 Ribosomal protein S15 YPN_3237 IPR005290 Ribosomal protein S15, bacterial-type YPN_3237 IPR009068 S15/NS1, RNA-binding YPN_3238 IPR002501 Pseudouridine synthase II YPN_3238 IPR014780 tRNA pseudouridine synthase II, TruB YPN_3238 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YPN_3238 IPR015947 PUA-like domain YPN_3238 IPR020103 Pseudouridine synthase, catalytic domain YPN_3238 IPR032819 YPN_3238 YPN_3238 IPR036974 YPN_3238 YPN_3239 IPR000238 Ribosome-binding factor A YPN_3239 IPR015946 K homology domain-like, alpha/beta YPN_3239 IPR020053 Ribosome-binding factor A, conserved site YPN_3239 IPR023799 Ribosome-binding factor A domain YPN_3240 IPR000178 Translation initiation factor aIF-2, bacterial-like YPN_3240 IPR000795 Elongation factor, GTP-binding domain YPN_3240 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPN_3240 IPR005225 Small GTP-binding protein domain YPN_3240 IPR006847 Translation initiation factor IF-2, N-terminal YPN_3240 IPR009000 Translation protein, beta-barrel domain YPN_3240 IPR009061 DNA binding domain, putative YPN_3240 IPR013575 Initiation factor 2 associated domain, bacterial YPN_3240 IPR023115 Translation initiation factor IF- 2, domain 3 YPN_3240 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3240 IPR036925 YPN_3240 YPN_3241 IPR004087 K Homology domain YPN_3241 IPR009019 K homology domain, prokaryotic type YPN_3241 IPR010213 Transcription termination factor NusA YPN_3241 IPR010214 Transcription termination factor NusA, C-terminal duplication YPN_3241 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YPN_3241 IPR012340 Nucleic acid-binding, OB-fold YPN_3241 IPR013735 Transcription factor NusA, N-terminal YPN_3241 IPR015946 K homology domain-like, alpha/beta YPN_3241 IPR022967 RNA-binding domain, S1 YPN_3241 IPR025249 KH domain, NusA-like YPN_3241 IPR030842 YPN_3241 YPN_3241 IPR036555 YPN_3241 YPN_3242 IPR003728 Ribosome maturation factor RimP YPN_3242 IPR028989 Ribosome maturation factor RimP, N-terminal YPN_3242 IPR028998 Ribosome maturation factor RimP, C-terminal YPN_3242 IPR035956 YPN_3242 YPN_3242 IPR036847 YPN_3242 YPN_3243 IPR004692 Preprotein translocase SecG subunit YPN_3244 IPR005841 Alpha-D-phosphohexomutase superfamily YPN_3244 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPN_3244 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPN_3244 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPN_3244 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPN_3244 IPR006352 Phosphoglucosamine mutase YPN_3244 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPN_3244 IPR016066 Alpha-D-phosphohexomutase, conserved site YPN_3244 IPR036900 YPN_3244 YPN_3245 IPR000489 Pterin-binding YPN_3245 IPR006390 Dihydropteroate synthase YPN_3245 IPR011005 Dihydropteroate synthase-like YPN_3246 IPR000642 Peptidase M41 YPN_3246 IPR003593 AAA+ ATPase domain YPN_3246 IPR003959 ATPase, AAA-type, core YPN_3246 IPR003960 ATPase, AAA-type, conserved site YPN_3246 IPR005936 Peptidase, FtsH YPN_3246 IPR011546 Peptidase M41, FtsH extracellular YPN_3246 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3246 IPR037219 YPN_3246 YPN_3247 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPN_3247 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YPN_3247 IPR015507 Ribosomal RNA large subunit methyltransferase E YPN_3247 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3248 IPR001890 RNA-binding, CRM domain YPN_3248 IPR017924 RNA-binding protein YhbY YPN_3248 IPR035920 YPN_3248 YPN_3249 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPN_3249 IPR006359 Transcription elongation factor GreA YPN_3249 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPN_3249 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPN_3249 IPR023459 Transcription elongation factor GreA/GreB family YPN_3249 IPR028624 Transcription elongation factor GreA/GreB YPN_3249 IPR036805 YPN_3249 YPN_3249 IPR036953 YPN_3249 YPN_3250 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YPN_3250 IPR012338 Beta-lactamase/transpeptidase-like YPN_3251 IPR001789 Signal transduction response regulator, receiver domain YPN_3251 IPR001867 Signal transduction response regulator, C-terminal YPN_3251 IPR011006 CheY-like superfamily YPN_3251 IPR036388 YPN_3251 YPN_3252 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3252 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_3252 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_3252 IPR036097 YPN_3252 YPN_3252 IPR036890 YPN_3252 YPN_3253 IPR006073 GTP binding domain YPN_3253 IPR006074 GTP1/OBG, conserved site YPN_3253 IPR006169 GTP1/OBG domain YPN_3253 IPR014100 GTP-binding protein Obg/CgtA YPN_3253 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3253 IPR035101 YPN_3253 YPN_3253 IPR036726 YPN_3253 YPN_3254 IPR000620 Drug/metabolite transporter YPN_3255 IPR001684 Ribosomal protein L27 YPN_3255 IPR018261 Ribosomal protein L27, conserved site YPN_3256 IPR001787 Ribosomal protein L21 YPN_3256 IPR018258 Ribosomal protein L21, conserved site YPN_3256 IPR028909 Ribosomal protein L21-like YPN_3256 IPR036164 YPN_3256 YPN_3257 IPR000092 Polyprenyl synthetase YPN_3257 IPR008949 Terpenoid synthase YPN_3257 IPR033749 YPN_3257 YPN_3258 IPR003314 Transposase MuA/Repressor CI, DNA-binding YPN_3258 IPR009061 DNA binding domain, putative YPN_3258 IPR036388 YPN_3258 YPN_3259 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3259 IPR038722 YPN_3259 YPN_3260 IPR001236 Lactate/malate dehydrogenase, N-terminal YPN_3260 IPR001252 Malate dehydrogenase, active site YPN_3260 IPR001557 L-lactate/malate dehydrogenase YPN_3260 IPR010097 Malate dehydrogenase, type 1 YPN_3260 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPN_3260 IPR022383 Lactate/malate dehydrogenase, C-terminal YPN_3260 IPR023958 Malate dehydrogenase, type 1, bacterial YPN_3260 IPR036291 YPN_3260 YPN_3261 IPR001669 Arginine repressor YPN_3261 IPR020899 Arginine repressor, C-terminal YPN_3261 IPR020900 Arginine repressor, DNA-binding domain YPN_3261 IPR036251 YPN_3261 YPN_3261 IPR036388 YPN_3261 YPN_3261 IPR036390 YPN_3261 YPN_3262 IPR010854 Domain of unknown function DUF1471 YPN_3262 IPR025543 Dodecin-like YPN_3262 IPR036275 YPN_3262 YPN_3263 IPR000713 Mur ligase, N-terminal YPN_3263 IPR004101 Mur ligase, C-terminal YPN_3263 IPR005757 Murein peptide ligase YPN_3263 IPR013221 Mur ligase, central YPN_3263 IPR036565 YPN_3263 YPN_3263 IPR036615 YPN_3263 YPN_3264 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase YPN_3264 IPR020548 Fructose-1,6-bisphosphatase, active site YPN_3264 IPR028343 Fructose-1,6-bisphosphatase YPN_3264 IPR033391 YPN_3264 YPN_3265 IPR008162 Inorganic pyrophosphatase YPN_3265 IPR036649 YPN_3265 YPN_3266 IPR009288 AIG2-like YPN_3266 IPR036568 YPN_3266 YPN_3267 IPR007452 Protein of unknown function DUF490 YPN_3268 IPR000184 Bacterial surface antigen (D15) YPN_3268 IPR010827 Surface antigen variable number YPN_3268 IPR035243 YPN_3268 YPN_3269 IPR002569 Peptide methionine sulphoxide reductase MsrA YPN_3269 IPR036509 YPN_3269 YPN_3270 IPR000644 CBS domain YPN_3270 IPR002550 Domain of unknown function DUF21 YPN_3270 IPR005170 Transporter-associated domain YPN_3270 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPN_3270 IPR036318 YPN_3270 YPN_3271 IPR009491 Protein of unknown function DUF1107 YPN_3272 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPN_3272 IPR036249 YPN_3272 YPN_3273 IPR000760 Inositol monophosphatase YPN_3273 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial YPN_3273 IPR020550 Inositol monophosphatase, conserved site YPN_3273 IPR020583 Inositol monophosphatase, metal-binding site YPN_3274 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPN_3274 IPR006146 5'-Nucleotidase, conserved site YPN_3274 IPR006179 5'-Nucleotidase/apyrase YPN_3274 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPN_3274 IPR008334 5'-Nucleotidase, C-terminal YPN_3274 IPR029052 Metallo-dependent phosphatase-like YPN_3274 IPR036907 YPN_3274 YPN_3275 IPR012312 Haemerythrin/HHE cation-binding motif YPN_3275 IPR019903 Repair of iron centres family YPN_3275 IPR023742 Iron-sulfur cluster repair protein YftE YPN_3276 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPN_3276 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPN_3276 IPR036944 YPN_3276 YPN_3277 IPR007340 Opacity-associated protein A YPN_3277 IPR013731 Opacity-associated protein A, N-terminal YPN_3278 IPR022231 Protein of unknown function DUF3757 YPN_3279 IPR002686 Transposase IS200-like YPN_3279 IPR036515 YPN_3279 YPN_3280 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPN_3280 IPR020069 Ribosomal protein L9, C-terminal YPN_3280 IPR020070 Ribosomal protein L9, N-terminal YPN_3280 IPR020594 Ribosomal protein L9, bacteria/chloroplast YPN_3280 IPR036791 YPN_3280 YPN_3280 IPR036935 YPN_3280 YPN_3281 IPR001648 Ribosomal protein S18 YPN_3281 IPR018275 Ribosomal protein S18, conserved site YPN_3281 IPR036870 YPN_3281 YPN_3282 IPR000424 Primosome PriB/single-strand DNA-binding YPN_3282 IPR012340 Nucleic acid-binding, OB-fold YPN_3282 IPR023646 Primosomal replication protein PriB YPN_3283 IPR000529 Ribosomal protein S6 YPN_3283 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPN_3283 IPR020814 Ribosomal protein S6, plastid/chloroplast YPN_3283 IPR020815 Ribosomal protein S6, conserved site YPN_3283 IPR035980 YPN_3283 YPN_3284 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPN_3284 IPR029058 Alpha/Beta hydrolase fold YPN_3285 IPR001584 Integrase, catalytic core YPN_3285 IPR006120 Resolvase, HTH domain YPN_3285 IPR009057 Homeodomain-like YPN_3285 IPR012337 Ribonuclease H-like domain YPN_3286 IPR001270 ClpA/B family YPN_3286 IPR002611 IstB-like ATP-binding protein YPN_3286 IPR003593 AAA+ ATPase domain YPN_3286 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3286 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3288 IPR010854 Domain of unknown function DUF1471 YPN_3288 IPR025543 Dodecin-like YPN_3288 IPR036275 YPN_3288 YPN_3289 IPR006089 Acyl-CoA dehydrogenase, conserved site YPN_3289 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPN_3289 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPN_3289 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPN_3289 IPR036250 YPN_3289 YPN_3290 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPN_3290 IPR004441 RNA methyltransferase TrmH family YPN_3290 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPN_3290 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPN_3290 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_3290 IPR029028 Alpha/beta knot methyltransferases YPN_3290 IPR029064 50S ribosomal protein L30e-like YPN_3291 IPR001900 YPN_3291 YPN_3291 IPR003029 Ribosomal protein S1, RNA-binding domain YPN_3291 IPR004476 Ribonuclease II/ribonuclease R YPN_3291 IPR011129 Cold shock protein YPN_3291 IPR011805 Ribonuclease R YPN_3291 IPR012340 Nucleic acid-binding, OB-fold YPN_3291 IPR013223 Ribonuclease B, N-terminal OB domain YPN_3291 IPR013668 Ribonuclease R winged-helix domain YPN_3291 IPR022967 RNA-binding domain, S1 YPN_3292 IPR000944 Transcription regulator Rrf2-like YPN_3292 IPR023761 Transcriptional repressor HTH, NsrR YPN_3292 IPR030489 YPN_3292 YPN_3292 IPR036388 YPN_3292 YPN_3292 IPR036390 YPN_3292 YPN_3293 IPR001114 Adenylosuccinate synthetase YPN_3293 IPR018220 Adenylosuccinate synthase, active site YPN_3293 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3293 IPR033128 YPN_3293 YPN_3294 IPR019201 Protein of unknown function DUF2065 YPN_3295 IPR001107 Band 7 protein YPN_3295 IPR010200 HflC YPN_3295 IPR036013 YPN_3295 YPN_3296 IPR001107 Band 7 protein YPN_3296 IPR001972 Stomatin family YPN_3296 IPR010201 HflK YPN_3296 IPR020980 Menbrane protein HflK, N-terminal YPN_3296 IPR036013 YPN_3296 YPN_3297 IPR006073 GTP binding domain YPN_3297 IPR016496 GTPase HflX YPN_3297 IPR025121 GTPase HflX N-terminal domain YPN_3297 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3297 IPR032305 YPN_3297 YPN_3297 IPR035647 YPN_3297 YPN_3298 IPR005001 Host factor Hfq YPN_3298 IPR010920 Like-Sm (LSM) domain YPN_3299 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase YPN_3299 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3300 IPR002099 DNA mismatch repair protein family YPN_3300 IPR013507 DNA mismatch repair protein, C-terminal YPN_3300 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_3300 IPR014762 DNA mismatch repair, conserved site YPN_3300 IPR014790 MutL, C-terminal, dimerisation YPN_3300 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_3300 IPR020667 DNA mismatch repair protein, MutL YPN_3300 IPR036890 YPN_3300 YPN_3300 IPR037198 YPN_3300 YPN_3301 IPR002508 Cell wall hydrolase/autolysin, catalytic YPN_3301 IPR018392 LysM domain YPN_3301 IPR021731 AMIN domain YPN_3301 IPR036779 YPN_3301 YPN_3302 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YPN_3302 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3303 IPR000631 YjeF C-terminal domain YPN_3303 IPR004443 YjeF N-terminal domain YPN_3303 IPR029056 Ribokinase-like YPN_3303 IPR030677 YPN_3303 YPN_3303 IPR036652 YPN_3303 YPN_3304 IPR004453 Epoxyqueuosine reductase QueG YPN_3304 IPR009051 Alpha-helical ferredoxin YPN_3304 IPR013542 Domain of unknown function DUF1730 YPN_3304 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_3305 IPR012337 Ribonuclease H-like domain YPN_3305 IPR013520 Exonuclease, RNase T/DNA polymerase III YPN_3305 IPR022894 Oligoribonuclease YPN_3305 IPR036397 YPN_3305 YPN_3306 IPR004881 Ribosome biogenesis GTPase RsgA, putative YPN_3306 IPR010914 EngC GTPase YPN_3306 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3307 IPR003817 Phosphatidylserine decarboxylase-related YPN_3307 IPR033177 YPN_3307 YPN_3307 IPR033178 YPN_3307 YPN_3308 IPR006685 Mechanosensitive ion channel MscS YPN_3308 IPR006686 Mechanosensitive ion channel MscS, conserved site YPN_3308 IPR010920 Like-Sm (LSM) domain YPN_3308 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPN_3308 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPN_3308 IPR023408 YPN_3308 YPN_3308 IPR024393 Mechanosensitive ion channel MscS, porin domain YPN_3308 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPN_3309 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPN_3309 IPR004525 Elongation factor P--(R)-beta-lysine ligase YPN_3309 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPN_3311 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPN_3311 IPR003953 FAD binding domain YPN_3311 IPR005884 Fumarate reductase, flavoprotein subunit YPN_3311 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPN_3311 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPN_3311 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPN_3311 IPR036188 YPN_3311 YPN_3311 IPR037099 YPN_3311 YPN_3312 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPN_3312 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPN_3312 IPR009051 Alpha-helical ferredoxin YPN_3312 IPR012675 Beta-grasp domain YPN_3312 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_3312 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_3312 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPN_3312 IPR036010 YPN_3312 YPN_3313 IPR003510 Fumarate reductase, subunit C YPN_3313 IPR034804 YPN_3313 YPN_3314 IPR003418 Fumarate reductase, D subunit YPN_3314 IPR034804 YPN_3314 YPN_3315 IPR000390 Small multidrug resistance protein family YPN_3316 IPR001059 Translation elongation factor P/YeiP, central YPN_3316 IPR008991 Translation protein SH3-like domain YPN_3316 IPR011768 Translation elongation factor P YPN_3316 IPR012340 Nucleic acid-binding, OB-fold YPN_3316 IPR013185 Translation elongation factor, KOW-like YPN_3316 IPR013852 Translation elongation factor P/YeiP, conserved site YPN_3316 IPR014722 Ribosomal protein L2 domain 2 YPN_3316 IPR015365 Elongation factor P, C-terminal YPN_3316 IPR020599 Translation elongation factor P/YeiP YPN_3317 IPR003739 Lysine-2,3-aminomutase family YPN_3317 IPR007197 Radical SAM YPN_3317 IPR013785 Aldolase-type TIM barrel YPN_3317 IPR022462 Lysine-2,3-aminomutase-like YPN_3318 IPR025294 Protein of unknown function DUF4156 YPN_3319 IPR001844 Chaperonin Cpn60 YPN_3319 IPR002423 Chaperonin Cpn60/TCP-1 YPN_3319 IPR018370 Chaperonin Cpn60, conserved site YPN_3319 IPR027409 GroEL-like apical domain YPN_3319 IPR027410 TCP-1-like chaperonin intermediate domain YPN_3319 IPR027413 GroEL-like equatorial domain YPN_3320 IPR011032 GroES (chaperonin 10)-like YPN_3320 IPR018369 Chaperonin Cpn10, conserved site YPN_3320 IPR020818 Chaperonin Cpn10 YPN_3320 IPR037124 YPN_3320 YPN_3321 IPR007313 FxsA cytoplasmic membrane protein YPN_3322 IPR000362 Fumarate lyase family YPN_3322 IPR004708 Aspartate ammonia-lyase YPN_3322 IPR008948 L-Aspartase-like YPN_3322 IPR018951 Fumarase C, C-terminal YPN_3322 IPR020557 Fumarate lyase, conserved site YPN_3322 IPR022761 Fumarate lyase, N-terminal YPN_3322 IPR024083 Fumarase/histidase, N-terminal YPN_3323 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPN_3324 IPR004323 Divalent ion tolerance protein, CutA YPN_3324 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPN_3324 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPN_3324 IPR023700 Divalent cation tolerance protein CutA, bacteria YPN_3325 IPR003834 Cytochrome c assembly protein, transmembrane domain YPN_3325 IPR017937 Thioredoxin, conserved site YPN_3325 IPR022910 Thiol:disulphide interchange protein DsbD YPN_3325 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPN_3325 IPR036249 YPN_3325 YPN_3325 IPR036929 YPN_3325 YPN_3326 IPR006478 Formate dehydrogenase, alpha subunit YPN_3326 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPN_3326 IPR006656 Molybdopterin oxidoreductase YPN_3326 IPR006657 Molydopterin dinucleotide-binding domain YPN_3326 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPN_3326 IPR009010 Aspartate decarboxylase-like domain YPN_3326 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPN_3327 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_3327 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_3328 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPN_3328 IPR009051 Alpha-helical ferredoxin YPN_3328 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_3328 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_3328 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_3328 IPR028261 Dihydroprymidine dehydrogenase domain II YPN_3328 IPR036188 YPN_3328 YPN_3329 IPR001647 DNA-binding HTH domain, TetR-type YPN_3329 IPR009057 Homeodomain-like YPN_3329 IPR036271 YPN_3329 YPN_3330 IPR004954 Peptidase M60, viral enhancin protein YPN_3330 IPR031161 YPN_3330 YPN_3332 IPR008992 Enterotoxin YPN_3333 IPR005063 Transposase, IS1 YPN_3335 IPR004673 L-rhamnose-proton symport, RhaT YPN_3337 IPR003313 AraC-type arabinose-binding/dimerisation domain YPN_3337 IPR009057 Homeodomain-like YPN_3337 IPR011051 RmlC-like cupin domain YPN_3337 IPR014710 RmlC-like jelly roll fold YPN_3337 IPR018060 DNA binding HTH domain, AraC-type YPN_3337 IPR018062 HTH domain AraC-type, conserved site YPN_3337 IPR020449 Transcription regulator HTH, AraC- type YPN_3337 IPR023699 Transcription activator HTH, RhaR YPN_3338 IPR003313 AraC-type arabinose-binding/dimerisation domain YPN_3338 IPR009057 Homeodomain-like YPN_3338 IPR014710 RmlC-like jelly roll fold YPN_3338 IPR018060 DNA binding HTH domain, AraC-type YPN_3338 IPR020449 Transcription regulator HTH, AraC- type YPN_3338 IPR023609 Transcription regulator HTH, RhaS YPN_3338 IPR037923 YPN_3338 YPN_3340 IPR000577 YPN_3340 YPN_3340 IPR013449 Rhamnulokinase YPN_3340 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_3340 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_3341 IPR009308 Rhamnose isomerase YPN_3341 IPR036237 YPN_3341 YPN_3342 IPR001303 Class II aldolase/adducin N-terminal YPN_3342 IPR013447 Rhamnulose-1-phosphate aldolase YPN_3342 IPR036409 YPN_3342 YPN_3343 IPR001670 Alcohol dehydrogenase, iron-type YPN_3343 IPR013460 Lactaldehyde reductase YPN_3343 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPN_3344 IPR008000 Rhamnose mutarotase YPN_3344 IPR011008 Dimeric alpha-beta barrel YPN_3344 IPR013448 L-rhamnose 1-epimerase YPN_3345 IPR000424 Primosome PriB/single-strand DNA-binding YPN_3345 IPR011344 Single-stranded DNA-binding protein YPN_3345 IPR012340 Nucleic acid-binding, OB-fold YPN_3346 IPR003439 ABC transporter-like YPN_3346 IPR004602 UvrABC system subunit A YPN_3346 IPR017871 ABC transporter, conserved site YPN_3346 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3347 IPR007351 Uncharacterised protein YjbR YPN_3347 IPR038056 YPN_3347 YPN_3348 IPR000796 Aspartate/other aminotransferase YPN_3348 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPN_3348 IPR004839 Aminotransferase, class I/classII YPN_3348 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3348 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3348 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3349 IPR000821 Alanine racemase YPN_3349 IPR001608 Alanine racemase, N-terminal YPN_3349 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPN_3349 IPR011079 Alanine racemase, C-terminal YPN_3349 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPN_3349 IPR029066 PLP-binding barrel YPN_3350 IPR003593 AAA+ ATPase domain YPN_3350 IPR007692 DNA helicase, DnaB type YPN_3350 IPR007693 DNA helicase, DnaB-like, N-terminal YPN_3350 IPR007694 DNA helicase, DnaB-like, C-terminal YPN_3350 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPN_3350 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3350 IPR036185 YPN_3350 YPN_3351 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YPN_3351 IPR011032 GroES (chaperonin 10)-like YPN_3351 IPR013149 Alcohol dehydrogenase, C-terminal YPN_3351 IPR013154 Alcohol dehydrogenase GroES-like YPN_3351 IPR020843 Polyketide synthase, enoylreductase YPN_3351 IPR036291 YPN_3351 YPN_3352 IPR014318 Phage shock protein, PspG YPN_3353 IPR001269 tRNA-dihydrouridine synthase YPN_3353 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN YPN_3353 IPR013785 Aldolase-type TIM barrel YPN_3353 IPR018517 tRNA-dihydrouridine synthase, conserved site YPN_3354 IPR002481 Ferric-uptake regulator YPN_3354 IPR036388 YPN_3354 YPN_3354 IPR036390 YPN_3354 YPN_3355 IPR006197 Peptidase S24, LexA-like YPN_3355 IPR006199 LexA repressor, DNA-binding domain YPN_3355 IPR006200 LexA repressor YPN_3355 IPR015927 Peptidase S24/S26A/S26B/S26C YPN_3355 IPR036286 YPN_3355 YPN_3355 IPR036388 YPN_3355 YPN_3355 IPR036390 YPN_3355 YPN_3356 IPR000829 Diacylglycerol kinase, prokaryotic YPN_3356 IPR036945 YPN_3356 YPN_3357 IPR002123 Phospholipid/glycerol acyltransferase YPN_3357 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YPN_3357 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YPN_3358 IPR000537 UbiA prenyltransferase family YPN_3358 IPR006370 4-hydroxybenzoate polyprenyl transferase YPN_3358 IPR030470 YPN_3358 YPN_3359 IPR007440 Chorismate--pyruvate lyase YPN_3359 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPN_3360 IPR005546 Autotransporter beta-domain YPN_3360 IPR006315 Outer membrane autotransporter barrel YPN_3360 IPR011050 Pectin lyase fold/virulence factor YPN_3360 IPR012332 P22 tailspike C-terminal domain-like YPN_3360 IPR036709 YPN_3360 YPN_3361 IPR003961 Fibronectin, type III YPN_3361 IPR006094 FAD linked oxidase, N-terminal YPN_3361 IPR012951 Berberine/berberine-like YPN_3361 IPR013783 Immunoglobulin-like fold YPN_3361 IPR036116 YPN_3361 YPN_3361 IPR036318 YPN_3361 YPN_3361 IPR036573 YPN_3361 YPN_3362 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain YPN_3363 IPR036259 YPN_3363 YPN_3364 IPR008962 PapD-like YPN_3364 IPR013783 Immunoglobulin-like fold YPN_3364 IPR016147 PapD, N-terminal, bacterial YPN_3364 IPR036316 YPN_3364 YPN_3365 IPR000015 Outer membrane usher protein YPN_3365 IPR018030 Fimbrial membrane usher, conserved site YPN_3365 IPR025885 PapC, N-terminal domain YPN_3365 IPR025949 PapC-like, C-terminal domain YPN_3365 IPR037224 YPN_3365 YPN_3366 IPR010546 Protein of unknown function DUF1120 YPN_3367 IPR003325 TerD domain YPN_3368 IPR003325 TerD domain YPN_3369 IPR005496 Integral membrane protein TerC YPN_3369 IPR022369 Integral membrane protein TerC, riboswitch-linked YPN_3370 IPR007791 Heat shock protein DnaJ-like protein DjlA YPN_3370 IPR029024 TerB-like YPN_3371 IPR003325 TerD domain YPN_3371 IPR017115 Tellurite resistance, TerA YPN_3372 IPR003325 TerD domain YPN_3373 IPR011226 ATP-grasp family YPN_3374 IPR011214 Uncharacterised conserved protein UCP020967 YPN_3374 IPR022537 TRSP domain YPN_3374 IPR029057 Phosphoribosyltransferase-like YPN_3375 IPR023214 HAD-like domain YPN_3375 IPR024197 Uncharacterised conserved protein UCP030802 YPN_3375 IPR036412 YPN_3375 YPN_3376 IPR011215 Phosphoribosyl transferase YPN_3376 IPR028157 PELOTA RNA-binding domain YPN_3377 IPR011206 Citrate lyase beta subunit-like YPN_3377 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPN_3377 IPR039480 YPN_3377 YPN_3378 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPN_3378 IPR036390 YPN_3378 YPN_3379 IPR003171 Methylenetetrahydrofolate reductase YPN_3379 IPR029041 FAD-linked oxidoreductase-like YPN_3380 IPR006638 Elongator protein 3/MiaB/NifB YPN_3380 IPR007197 Radical SAM YPN_3380 IPR023404 Radical SAM, alpha/beta horseshoe YPN_3380 IPR026332 Putative heme utilization radical SAM enzyme HutW YPN_3381 IPR010413 Heme utilization carrier protein HutX like YPN_3382 IPR016040 NAD(P)-binding domain YPN_3382 IPR036291 YPN_3382 YPN_3383 IPR019600 Hemin uptake protein HemP YPN_3384 IPR000531 TonB-dependent receptor, beta-barrel YPN_3384 IPR010916 TonB box, conserved site YPN_3384 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPN_3384 IPR011276 TonB-dependent haem/haemoglobin receptor YPN_3384 IPR012910 TonB-dependent receptor, plug YPN_3384 IPR036942 YPN_3384 YPN_3384 IPR037066 YPN_3384 YPN_3385 IPR007845 Haemin-degrading HemS/ChuX domain YPN_3386 IPR002491 ABC transporter periplasmic binding domain YPN_3387 IPR000522 ABC transporter, permease protein YPN_3387 IPR037294 YPN_3387 YPN_3388 IPR003439 ABC transporter-like YPN_3388 IPR003593 AAA+ ATPase domain YPN_3388 IPR017871 ABC transporter, conserved site YPN_3388 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3389 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPN_3389 IPR006233 Cystathionine beta-lyase, bacterial YPN_3389 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3389 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3389 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3391 IPR000847 Transcription regulator HTH, LysR YPN_3391 IPR005119 LysR, substrate-binding YPN_3391 IPR036388 YPN_3391 YPN_3391 IPR036390 YPN_3391 YPN_3392 IPR001455 TusA-like domain YPN_3392 IPR036868 YPN_3392 YPN_3393 IPR007272 Sulphur transport domain YPN_3394 IPR006135 Type III secretion system substrate exporter YPN_3394 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPN_3394 IPR029025 Type III secretion system substrate exporter, C-terminal YPN_3395 IPR002010 Type III secretion system inner membrane R protein YPN_3395 IPR006304 Type III secretion protein SpaR/YscT YPN_3396 IPR002191 Bacterial export protein family 3 YPN_3396 IPR006306 Type III secretion protein HrpO YPN_3397 IPR005773 Yop virulence translocation protein R YPN_3397 IPR005838 Type III secretion system inner membrane P protein YPN_3398 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPN_3398 IPR001543 Surface presentation of antigen (SpoA) YPN_3398 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPN_3398 IPR036429 YPN_3398 YPN_3401 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPN_3401 IPR003593 AAA+ ATPase domain YPN_3401 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPN_3401 IPR005714 ATPase, type III secretion system, FliI/YscN YPN_3401 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPN_3401 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3402 IPR001712 Type III secretion system FHIPEP YPN_3403 IPR001712 Type III secretion system FHIPEP YPN_3403 IPR025505 FHIPEP conserved site YPN_3404 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E YPN_3404 IPR012842 Type III secretion system HrpE/YscL YPN_3405 IPR025292 Type III secretion system protein YPN_3406 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPN_3406 IPR006182 Secretory protein YscJ/FliF YPN_3407 IPR012670 Type III secretion system, YscI/HrpB YPN_3408 IPR010437 Type III secretion system SsaH YPN_3409 IPR009057 Homeodomain-like YPN_3409 IPR018060 DNA binding HTH domain, AraC-type YPN_3409 IPR020449 Transcription regulator HTH, AraC- type YPN_3410 IPR012671 Type III secretion system, secretion protein E YPN_3411 IPR012843 Type III secretion system YscD/HrpQ YPN_3411 IPR032034 YPN_3411 YPN_3412 IPR003522 Type III secretion system outer membrane pore YscC/HrcC YPN_3412 IPR004845 Type II secretion system GspD, conserved site YPN_3412 IPR004846 Type II/III secretion system YPN_3412 IPR005644 NolW-like YPN_3412 IPR038591 YPN_3412 YPN_3413 IPR001789 Signal transduction response regulator, receiver domain YPN_3413 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3413 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_3413 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_3413 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPN_3413 IPR011006 CheY-like superfamily YPN_3413 IPR036097 YPN_3413 YPN_3413 IPR036641 YPN_3413 YPN_3413 IPR036890 YPN_3413 YPN_3414 IPR000792 Transcription regulator LuxR, C-terminal YPN_3414 IPR001789 Signal transduction response regulator, receiver domain YPN_3414 IPR011006 CheY-like superfamily YPN_3414 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3415 IPR001991 Sodium:dicarboxylate symporter YPN_3415 IPR018107 Sodium:dicarboxylate symporter, conserved site YPN_3415 IPR034703 YPN_3415 YPN_3415 IPR036458 YPN_3415 YPN_3416 IPR000873 AMP-dependent synthetase/ligase YPN_3416 IPR011904 Acetate-CoA ligase YPN_3416 IPR020845 AMP-binding, conserved site YPN_3416 IPR025110 AMP-binding enzyme C-terminal domain YPN_3416 IPR032387 YPN_3416 YPN_3417 IPR007436 Protein of unknown function DUF485 YPN_3418 IPR001734 Sodium/solute symporter YPN_3418 IPR014083 Cation/acetate symporter ActP YPN_3418 IPR018212 Sodium/solute symporter, conserved site YPN_3418 IPR038377 YPN_3418 YPN_3419 IPR025890 Abhydrolase, bacterial YPN_3419 IPR029058 Alpha/Beta hydrolase fold YPN_3420 IPR001584 Integrase, catalytic core YPN_3420 IPR006120 Resolvase, HTH domain YPN_3420 IPR009057 Homeodomain-like YPN_3420 IPR012337 Ribonuclease H-like domain YPN_3421 IPR001270 ClpA/B family YPN_3421 IPR002611 IstB-like ATP-binding protein YPN_3421 IPR003593 AAA+ ATPase domain YPN_3421 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3421 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3422 IPR001584 Integrase, catalytic core YPN_3422 IPR012337 Ribonuclease H-like domain YPN_3422 IPR025948 HTH-like domain YPN_3422 IPR036397 YPN_3422 YPN_3423 IPR002514 Transposase IS3/IS911family YPN_3423 IPR009057 Homeodomain-like YPN_3425 IPR001584 Integrase, catalytic core YPN_3425 IPR006120 Resolvase, HTH domain YPN_3425 IPR009057 Homeodomain-like YPN_3425 IPR012337 Ribonuclease H-like domain YPN_3426 IPR001270 ClpA/B family YPN_3426 IPR002611 IstB-like ATP-binding protein YPN_3426 IPR003593 AAA+ ATPase domain YPN_3426 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3426 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3427 IPR004045 Glutathione S-transferase, N-terminal YPN_3427 IPR016639 Glutathione S-transferase (GST) YPN_3427 IPR036249 YPN_3427 YPN_3427 IPR036282 YPN_3427 YPN_3428 IPR000847 Transcription regulator HTH, LysR YPN_3428 IPR005119 LysR, substrate-binding YPN_3428 IPR036388 YPN_3428 YPN_3428 IPR036390 YPN_3428 YPN_3429 IPR003829 Pirin, N-terminal domain YPN_3429 IPR011051 RmlC-like cupin domain YPN_3429 IPR012093 Pirin YPN_3429 IPR014710 RmlC-like jelly roll fold YPN_3430 IPR000878 Tetrapyrrole methylase YPN_3430 IPR008189 rRNA small subunit methyltransferase I YPN_3430 IPR014776 Tetrapyrrole methylase, subdomain 2 YPN_3430 IPR014777 Tetrapyrrole methylase, subdomain 1 YPN_3430 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YPN_3430 IPR035996 YPN_3430 YPN_3431 IPR007443 Penicillin-binding protein activator LpoA YPN_3431 IPR011990 Tetratricopeptide-like helical domain YPN_3431 IPR028082 Periplasmic binding protein-like I YPN_3432 IPR003509 Uncharacterised protein family UPF0102 YPN_3432 IPR011335 Restriction endonuclease type II-like YPN_3432 IPR011856 tRNA endonuclease-like domain YPN_3433 IPR001347 Sugar isomerase (SIS) YPN_3433 IPR023070 DnaA initiator-associating protein YPN_3434 IPR007055 BON domain YPN_3434 IPR014004 Transport-associated and nodulation domain, bacteria YPN_3435 IPR001264 Glycosyl transferase, family 51 YPN_3435 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase YPN_3435 IPR023346 Lysozyme-like domain YPN_3435 IPR036950 YPN_3435 YPN_3436 IPR026041 Enhancing lycopene biosynthesis protein 2 YPN_3436 IPR029062 Class I glutamine amidotransferase-like YPN_3437 IPR000014 PAS domain YPN_3437 IPR001789 Signal transduction response regulator, receiver domain YPN_3437 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3437 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_3437 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_3437 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPN_3437 IPR011006 CheY-like superfamily YPN_3437 IPR013767 PAS fold YPN_3437 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YPN_3437 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain YPN_3437 IPR035965 YPN_3437 YPN_3437 IPR036097 YPN_3437 YPN_3437 IPR036641 YPN_3437 YPN_3437 IPR036890 YPN_3437 YPN_3438 IPR005911 Conserved hypothetical protein CHP01212 YPN_3438 IPR006638 Elongator protein 3/MiaB/NifB YPN_3438 IPR007197 Radical SAM YPN_3438 IPR023404 Radical SAM, alpha/beta horseshoe YPN_3438 IPR032432 YPN_3438 YPN_3439 IPR002489 Glutamate synthase, alpha subunit, C-terminal YPN_3439 IPR002932 Glutamate synthase domain YPN_3439 IPR006982 Glutamate synthase, central-N YPN_3439 IPR013785 Aldolase-type TIM barrel YPN_3439 IPR017932 Glutamine amidotransferase type 2 domain YPN_3439 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_3439 IPR036485 YPN_3439 YPN_3440 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPN_3440 IPR009051 Alpha-helical ferredoxin YPN_3440 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_3440 IPR028261 Dihydroprymidine dehydrogenase domain II YPN_3440 IPR036188 YPN_3440 YPN_3442 IPR007481 Stringent starvation protein B YPN_3442 IPR036760 YPN_3442 YPN_3443 IPR004045 Glutathione S-transferase, N-terminal YPN_3443 IPR004046 Glutathione S-transferase, C-terminal YPN_3443 IPR036249 YPN_3443 YPN_3443 IPR036282 YPN_3443 YPN_3444 IPR000754 Ribosomal protein S9 YPN_3444 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_3444 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_3444 IPR020574 Ribosomal protein S9, conserved site YPN_3444 IPR023035 Ribosomal protein S9, bacterial/plastid YPN_3445 IPR005822 Ribosomal protein L13 YPN_3445 IPR005823 Ribosomal protein L13, bacterial-type YPN_3445 IPR023563 Ribosomal protein L13, conserved site YPN_3445 IPR036899 YPN_3445 YPN_3446 IPR005654 ATPase, AFG1-like YPN_3446 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3446 IPR030870 YPN_3446 YPN_3447 IPR009386 Protein of unknown function DUF1043 YPN_3448 IPR001478 PDZ domain YPN_3448 IPR001940 Peptidase S1C YPN_3448 IPR009003 Trypsin-like cysteine/serine peptidase domain YPN_3448 IPR011782 Peptidase S1C, Do YPN_3448 IPR036034 YPN_3448 YPN_3449 IPR002686 Transposase IS200-like YPN_3449 IPR036515 YPN_3449 YPN_3450 IPR001478 PDZ domain YPN_3450 IPR001940 Peptidase S1C YPN_3450 IPR009003 Trypsin-like cysteine/serine peptidase domain YPN_3450 IPR011783 Peptidase S1C, DegS YPN_3450 IPR036034 YPN_3450 YPN_3451 IPR001986 Enolpyruvate transferase domain YPN_3451 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPN_3451 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPN_3451 IPR036968 YPN_3451 YPN_3452 IPR002634 BolA protein YPN_3452 IPR036065 YPN_3452 YPN_3453 IPR002645 STAS domain YPN_3453 IPR036513 YPN_3453 YPN_3454 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPN_3455 IPR003399 Mammalian cell entry-related YPN_3455 IPR030970 YPN_3455 YPN_3456 IPR003453 Permease domain YPN_3456 IPR030802 YPN_3456 YPN_3457 IPR003439 ABC transporter-like YPN_3457 IPR003593 AAA+ ATPase domain YPN_3457 IPR017871 ABC transporter, conserved site YPN_3457 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3458 IPR004481 Sodium/potassium/calcium exchanger YPN_3458 IPR004837 Sodium/calcium exchanger membrane region YPN_3459 IPR000644 CBS domain YPN_3459 IPR001347 Sugar isomerase (SIS) YPN_3459 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPN_3460 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YPN_3460 IPR023214 HAD-like domain YPN_3460 IPR036412 YPN_3460 YPN_3461 IPR010664 Lipopolysaccharide assembly, LptC-related YPN_3461 IPR026265 Lipopolysaccharide export system protein LptC YPN_3462 IPR005653 Organic solvent tolerance-like, N-terminal YPN_3462 IPR014340 Lipopolysaccharide assembly, LptA YPN_3463 IPR003439 ABC transporter-like YPN_3463 IPR003593 AAA+ ATPase domain YPN_3463 IPR017871 ABC transporter, conserved site YPN_3463 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3463 IPR030921 YPN_3463 YPN_3463 IPR032823 YPN_3463 YPN_3464 IPR000394 RNA polymerase sigma factor 54 YPN_3464 IPR007046 RNA polymerase sigma factor 54, core-binding YPN_3464 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPN_3464 IPR038709 YPN_3464 YPN_3465 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein YPN_3465 IPR036567 YPN_3465 YPN_3466 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein YPN_3466 IPR036567 YPN_3466 YPN_3467 IPR002178 PTS EIIA type-2 domain YPN_3467 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YPN_3467 IPR016152 Phosphotransferase/anion transporter YPN_3468 IPR005337 ATPase, P-loop-containing YPN_3468 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3469 IPR000032 Phosphocarrier HPr protein-like YPN_3469 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPN_3469 IPR035895 YPN_3469 YPN_3470 IPR002082 Aspartate carbamoyltransferase YPN_3470 IPR006130 Aspartate/ornithine carbamoyltransferase YPN_3470 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPN_3470 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPN_3470 IPR036901 YPN_3470 YPN_3471 IPR002801 Aspartate transcarbamylase regulatory subunit YPN_3471 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPN_3471 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPN_3471 IPR036792 YPN_3471 YPN_3471 IPR036793 YPN_3471 YPN_3472 IPR006056 Enamine/imine deaminase YjgF-like YPN_3472 IPR006175 YjgF/Yer057p/UK114 family YPN_3472 IPR019897 YjgF-like protein, conserved site YPN_3472 IPR035959 YPN_3472 YPN_3473 IPR031948 YPN_3473 YPN_3473 IPR038643 YPN_3473 YPN_3474 IPR000843 Transcription regulator HTH, LacI YPN_3474 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3474 IPR012771 Trehalose operon repressor YPN_3474 IPR028082 Periplasmic binding protein-like I YPN_3475 IPR001996 Phosphotransferase system, IIB component, type 1 YPN_3475 IPR003352 Phosphotransferase system, EIIC YPN_3475 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YPN_3475 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPN_3475 IPR036878 YPN_3475 YPN_3476 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPN_3476 IPR012769 Trehalose-6-phosphate hydrolase YPN_3476 IPR013780 Glycosyl hydrolase, family 13, all-beta YPN_3476 IPR017853 Glycoside hydrolase, superfamily YPN_3476 IPR022567 Domain of unknown function DUF3459 YPN_3477 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPN_3477 IPR023459 Transcription elongation factor GreA/GreB family YPN_3477 IPR028625 Regulator of nucleoside diphosphate kinase YPN_3477 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPN_3477 IPR036953 YPN_3477 YPN_3478 IPR009155 Cytochrome b562 YPN_3478 IPR010980 Cytochrome c/b562 YPN_3480 IPR002510 TldD/PmbA YPN_3480 IPR035068 YPN_3480 YPN_3480 IPR036059 YPN_3480 YPN_3481 IPR006839 Ribosome-associated, YjgA YPN_3481 IPR023153 PSPTO4464-like domain YPN_3482 IPR000468 Barstar (barnase inhibitor) YPN_3482 IPR035905 YPN_3482 YPN_3483 IPR000026 Guanine-specific ribonuclease N1/T1 YPN_3483 IPR001887 Barnase YPN_3483 IPR016191 Ribonuclease/ribotoxin YPN_3484 IPR015590 Aldehyde dehydrogenase domain YPN_3484 IPR016161 Aldehyde/histidinol dehydrogenase YPN_3484 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_3484 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_3485 IPR015590 Aldehyde dehydrogenase domain YPN_3485 IPR016160 Aldehyde dehydrogenase, cysteine active site YPN_3485 IPR016161 Aldehyde/histidinol dehydrogenase YPN_3485 IPR016162 Aldehyde dehydrogenase, N-terminal YPN_3485 IPR016163 Aldehyde dehydrogenase, C-terminal YPN_3485 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPN_3486 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPN_3486 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YPN_3487 IPR006143 RND efflux pump, membrane fusion protein YPN_3487 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPN_3487 IPR039562 YPN_3487 YPN_3488 IPR012451 Protein of unknown function DUF1656 YPN_3489 IPR000847 Transcription regulator HTH, LysR YPN_3489 IPR005119 LysR, substrate-binding YPN_3489 IPR036388 YPN_3489 YPN_3489 IPR036390 YPN_3489 YPN_3490 IPR000847 Transcription regulator HTH, LysR YPN_3490 IPR036388 YPN_3490 YPN_3490 IPR036390 YPN_3490 YPN_3491 IPR018003 Insecticidal toxin complex/plasmid virulence protein YPN_3493 IPR003284 Salmonella virulence plasmid 65kDa B protein YPN_3493 IPR022044 Insecticide toxin TcdB middle/C-terminal YPN_3493 IPR022045 Insecticide toxin TcdB middle/N-terminal YPN_3494 IPR032126 YPN_3494 YPN_3495 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPN_3495 IPR039561 YPN_3495 YPN_3496 IPR022538 Protein of unknown function DUF2570 YPN_3497 IPR000340 Dual specificity phosphatase, catalytic domain YPN_3497 IPR006530 YD repeat YPN_3497 IPR016130 Protein-tyrosine phosphatase, active site YPN_3497 IPR022385 Rhs repeat-associated core YPN_3497 IPR029021 Protein-tyrosine phosphatase-like YPN_3498 IPR006530 YD repeat YPN_3498 IPR016130 Protein-tyrosine phosphatase, active site YPN_3498 IPR022385 Rhs repeat-associated core YPN_3498 IPR029021 Protein-tyrosine phosphatase-like YPN_3499 IPR002510 TldD/PmbA YPN_3499 IPR025502 TldD YPN_3499 IPR035068 YPN_3499 YPN_3499 IPR036059 YPN_3499 YPN_3500 IPR001110 Uncharacterised protein family UPF0012, conserved site YPN_3500 IPR003010 Carbon-nitrogen hydrolase YPN_3500 IPR036526 YPN_3500 YPN_3501 IPR011836 Conserved hypothetical protein CHP02099 YPN_3501 IPR025263 Domain of unknown function DUF3971 YPN_3501 IPR032712 YPN_3501 YPN_3502 IPR003029 Ribosomal protein S1, RNA-binding domain YPN_3502 IPR004659 Ribonuclease E/G YPN_3502 IPR012340 Nucleic acid-binding, OB-fold YPN_3502 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPN_3502 IPR022967 RNA-binding domain, S1 YPN_3503 IPR003697 Maf-like protein YPN_3503 IPR029001 Inosine triphosphate pyrophosphatase-like YPN_3504 IPR007227 Cell shape-determining protein MreD YPN_3504 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPN_3505 IPR007221 Rod shape-determining protein MreC YPN_3506 IPR004753 Cell shape determining protein MreB/Mrl YPN_3507 IPR000160 GGDEF domain YPN_3507 IPR001633 EAL domain YPN_3507 IPR029787 Nucleotide cyclase YPN_3507 IPR033423 YPN_3507 YPN_3507 IPR035919 YPN_3507 YPN_3508 IPR011032 GroES (chaperonin 10)-like YPN_3508 IPR013149 Alcohol dehydrogenase, C-terminal YPN_3508 IPR013154 Alcohol dehydrogenase GroES-like YPN_3508 IPR014188 Acrylyl-CoA reductase AcuI YPN_3508 IPR020843 Polyketide synthase, enoylreductase YPN_3508 IPR036291 YPN_3508 YPN_3509 IPR000572 Oxidoreductase, molybdopterin-binding domain YPN_3509 IPR022867 Sulphoxide reductase catalytic subunit YedY YPN_3509 IPR036374 YPN_3509 YPN_3510 IPR013130 Ferric reductase transmembrane component-like domain YPN_3510 IPR022837 Sulphoxide reductase heme-binding subunit YedZ YPN_3511 IPR001874 Dehydroquinase, class II YPN_3511 IPR018509 Dehydroquinase, class II, conserved site YPN_3511 IPR036441 YPN_3511 YPN_3512 IPR000089 Biotin/lipoyl attachment YPN_3512 IPR001249 Acetyl-CoA biotin carboxyl carrier YPN_3512 IPR001882 Biotin-binding site YPN_3512 IPR011053 Single hybrid motif YPN_3513 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YPN_3513 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPN_3513 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal YPN_3513 IPR005482 Biotin carboxylase, C-terminal YPN_3513 IPR011054 Rudiment single hybrid motif YPN_3513 IPR013815 ATP-grasp fold, subdomain 1 YPN_3513 IPR016185 Pre-ATP-grasp domain YPN_3514 IPR010398 Protein of unknown function DUF997 YPN_3515 IPR001734 Sodium/solute symporter YPN_3515 IPR011849 Sodium/pantothenate symporter YPN_3515 IPR018212 Sodium/solute symporter, conserved site YPN_3515 IPR038377 YPN_3515 YPN_3516 IPR004498 Ribosomal protein L11 methyltransferase YPN_3516 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3517 IPR001269 tRNA-dihydrouridine synthase YPN_3517 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YPN_3517 IPR013785 Aldolase-type TIM barrel YPN_3517 IPR018517 tRNA-dihydrouridine synthase, conserved site YPN_3517 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YPN_3517 IPR032887 YPN_3517 YPN_3518 IPR002197 DNA binding HTH domain, Fis-type YPN_3518 IPR005412 DNA-binding protein Fis YPN_3518 IPR009057 Homeodomain-like YPN_3520 IPR000524 Transcription regulator HTH, GntR YPN_3520 IPR008920 Transcription regulator FadR/GntR, C-terminal YPN_3520 IPR011711 GntR, C-terminal YPN_3520 IPR036388 YPN_3520 YPN_3520 IPR036390 YPN_3520 YPN_3521 IPR005829 Sugar transporter, conserved site YPN_3521 IPR011701 Major facilitator superfamily YPN_3521 IPR036259 YPN_3521 YPN_3522 IPR003779 Carboxymuconolactone decarboxylase-like YPN_3522 IPR029032 AhpD-like YPN_3523 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YPN_3523 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPN_3523 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_3523 IPR013328 Dehydrogenase, multihelical YPN_3523 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type YPN_3523 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YPN_3523 IPR036291 YPN_3523 YPN_3524 IPR001279 Beta-lactamase-like YPN_3524 IPR036866 YPN_3524 YPN_3525 IPR008816 Glycine zipper 2TM domain YPN_3526 IPR002059 Cold-shock protein, DNA-binding YPN_3526 IPR011129 Cold shock protein YPN_3526 IPR012156 Cold shock, CspA YPN_3526 IPR012340 Nucleic acid-binding, OB-fold YPN_3526 IPR019844 Cold-shock conserved site YPN_3527 IPR002059 Cold-shock protein, DNA-binding YPN_3527 IPR011129 Cold shock protein YPN_3527 IPR012156 Cold shock, CspA YPN_3527 IPR012340 Nucleic acid-binding, OB-fold YPN_3527 IPR019844 Cold-shock conserved site YPN_3528 IPR002686 Transposase IS200-like YPN_3528 IPR036515 YPN_3528 YPN_3529 IPR036869 YPN_3529 YPN_3530 IPR027372 Phytase-like domain YPN_3531 IPR004045 Glutathione S-transferase, N-terminal YPN_3531 IPR036249 YPN_3531 YPN_3531 IPR036282 YPN_3531 YPN_3532 IPR001347 Sugar isomerase (SIS) YPN_3533 IPR000577 YPN_3533 YPN_3533 IPR006003 Carbohydrate kinase, FGGY-related YPN_3533 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_3533 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_3534 IPR001851 ABC transporter, permease YPN_3535 IPR001851 ABC transporter, permease YPN_3536 IPR003439 ABC transporter-like YPN_3536 IPR003593 AAA+ ATPase domain YPN_3536 IPR017871 ABC transporter, conserved site YPN_3536 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3537 IPR025997 Periplasmic binding protein domain YPN_3537 IPR028082 Periplasmic binding protein-like I YPN_3538 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPN_3538 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPN_3538 IPR030857 YPN_3538 YPN_3540 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YPN_3540 IPR006153 Cation/H+ exchanger YPN_3541 IPR006043 Xanthine/uracil/vitamin C permease YPN_3542 IPR007337 RelB antitoxin/Antitoxin DinJ YPN_3542 IPR026262 Antitoxin DinJ YPN_3543 IPR003439 ABC transporter-like YPN_3543 IPR003593 AAA+ ATPase domain YPN_3543 IPR017871 ABC transporter, conserved site YPN_3543 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3544 IPR000515 MetI-like domain YPN_3544 IPR035906 YPN_3544 YPN_3545 IPR011251 Luciferase-like domain YPN_3545 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YPN_3545 IPR036661 YPN_3545 YPN_3546 IPR001638 Extracellular solute-binding protein, family 3 YPN_3546 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates YPN_3546 IPR015168 SsuA/THI5-like YPN_3547 IPR005025 NADPH-dependent FMN reductase-like YPN_3547 IPR020048 NADPH-dependent FMN reductase, SsuE YPN_3547 IPR029039 Flavoprotein-like YPN_3548 IPR002915 DeoC/FbaB/ lacD aldolase YPN_3548 IPR011343 Deoxyribose-phosphate aldolase YPN_3548 IPR013785 Aldolase-type TIM barrel YPN_3549 IPR002139 Ribokinase YPN_3549 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPN_3549 IPR011611 Carbohydrate kinase PfkB YPN_3549 IPR011877 Ribokinase, bacterial YPN_3549 IPR029056 Ribokinase-like YPN_3550 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPN_3550 IPR023750 RbsD-like domain YPN_3551 IPR003313 AraC-type arabinose-binding/dimerisation domain YPN_3551 IPR009057 Homeodomain-like YPN_3551 IPR014710 RmlC-like jelly roll fold YPN_3551 IPR018060 DNA binding HTH domain, AraC-type YPN_3551 IPR037923 YPN_3551 YPN_3552 IPR000683 Oxidoreductase, N-terminal YPN_3552 IPR036291 YPN_3552 YPN_3553 IPR013022 Xylose isomerase-like, TIM barrel domain YPN_3553 IPR036237 YPN_3553 YPN_3555 IPR001826 RHS protein YPN_3555 IPR006530 YD repeat YPN_3555 IPR008727 PAAR motif YPN_3555 IPR022385 Rhs repeat-associated core YPN_3555 IPR031325 YPN_3555 YPN_3556 IPR014894 Protein DcrB YPN_3556 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPN_3557 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPN_3557 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPN_3557 IPR037026 YPN_3557 YPN_3558 IPR021069 ImpA, C-terminal YPN_3559 IPR001387 Cro/C1-type helix-turn-helix domain YPN_3559 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3560 IPR014944 Toxin SymE-like YPN_3561 IPR014944 Toxin SymE-like YPN_3562 IPR018958 SMI1/KNR4 like domain YPN_3562 IPR037883 YPN_3562 YPN_3563 IPR001826 RHS protein YPN_3563 IPR022385 Rhs repeat-associated core YPN_3563 IPR032869 YPN_3563 YPN_3564 IPR006530 YD repeat YPN_3564 IPR008727 PAAR motif YPN_3564 IPR031325 YPN_3564 YPN_3565 IPR014894 Protein DcrB YPN_3565 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPN_3566 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPN_3566 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPN_3566 IPR037026 YPN_3566 YPN_3567 IPR021069 ImpA, C-terminal YPN_3568 IPR010657 ImpA, N-terminal YPN_3569 IPR009612 ImcF-related YPN_3569 IPR010623 Domain of unknown function DUF1215 YPN_3569 IPR017731 Type VI secretion system, IcmF YPN_3569 IPR025743 ImcF-related, N-terminal domain YPN_3569 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3570 IPR010657 ImpA, N-terminal YPN_3570 IPR017739 Type VI secretion system-associated, VCA0119 YPN_3571 IPR017738 Type VI secretion system-associated, VCA0118 YPN_3572 IPR002197 DNA binding HTH domain, Fis-type YPN_3572 IPR009057 Homeodomain-like YPN_3573 IPR001270 ClpA/B family YPN_3573 IPR003593 AAA+ ATPase domain YPN_3573 IPR003959 ATPase, AAA-type, core YPN_3573 IPR017729 Type VI secretion system, ATPase ClpV1 YPN_3573 IPR018368 ClpA/B, conserved site 1 YPN_3573 IPR019489 Clp ATPase, C-terminal YPN_3573 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3573 IPR028299 ClpA/B, conserved site 2 YPN_3573 IPR036628 YPN_3573 YPN_3574 IPR017732 Type IV / VI secretion system, DotU YPN_3574 IPR038522 YPN_3574 YPN_3575 IPR010263 Protein of unknown function DUF876 YPN_3576 IPR017734 Type VI secretion system, lipoprotein SciN YPN_3576 IPR038706 YPN_3576 YPN_3577 IPR008984 SMAD/FHA domain YPN_3577 IPR017735 Type VI secretion system, FHA domain-containing protein YPN_3578 IPR010732 Protein of unknown function DUF1305 YPN_3579 IPR010272 Type VI secretion system, VCA0110 YPN_3580 IPR009057 Homeodomain-like YPN_3580 IPR010921 Trp repressor/replication initiator YPN_3581 IPR001584 Integrase, catalytic core YPN_3581 IPR012337 Ribonuclease H-like domain YPN_3581 IPR025948 HTH-like domain YPN_3581 IPR036397 YPN_3581 YPN_3583 IPR010351 Protein of unknown function DUF943 YPN_3585 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPN_3585 IPR006076 FAD dependent oxidoreductase YPN_3585 IPR031656 YPN_3585 YPN_3585 IPR036188 YPN_3585 YPN_3585 IPR038299 YPN_3585 YPN_3586 IPR000811 Glycosyl transferase, family 35 YPN_3586 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPN_3586 IPR035090 YPN_3586 YPN_3587 IPR001296 Glycosyl transferase, family 1 YPN_3587 IPR011835 Glycogen/starch synthase, ADP-glucose type YPN_3587 IPR013534 Starch synthase, catalytic domain YPN_3588 IPR005835 Nucleotidyl transferase YPN_3588 IPR005836 ADP-glucose pyrophosphorylase, conserved site YPN_3588 IPR011004 Trimeric LpxA-like YPN_3588 IPR011831 Glucose-1-phosphate adenylyltransferase YPN_3588 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YPN_3588 IPR029044 Nucleotide-diphospho-sugar transferases YPN_3589 IPR004193 Glycoside hydrolase, family 13, N-terminal YPN_3589 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPN_3589 IPR011837 Glycogen debranching enzyme, GlgX type YPN_3589 IPR013780 Glycosyl hydrolase, family 13, all-beta YPN_3589 IPR013783 Immunoglobulin-like fold YPN_3589 IPR014756 Immunoglobulin E-set YPN_3589 IPR017853 Glycoside hydrolase, superfamily YPN_3589 IPR022844 Glycogen debranching enzyme, bacterial YPN_3590 IPR004193 Glycoside hydrolase, family 13, N-terminal YPN_3590 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPN_3590 IPR006048 Alpha-amylase, C-terminal all beta YPN_3590 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YPN_3590 IPR013780 Glycosyl hydrolase, family 13, all-beta YPN_3590 IPR013783 Immunoglobulin-like fold YPN_3590 IPR014756 Immunoglobulin E-set YPN_3590 IPR017853 Glycoside hydrolase, superfamily YPN_3590 IPR037439 YPN_3590 YPN_3591 IPR010559 Signal transduction histidine kinase, internal region YPN_3591 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YPN_3591 IPR036890 YPN_3591 YPN_3592 IPR003344 Bacterial Ig-like, group 1 YPN_3592 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPN_3592 IPR008964 Invasin/intimin cell-adhesion YPN_3592 IPR013783 Immunoglobulin-like fold YPN_3592 IPR018392 LysM domain YPN_3592 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPN_3592 IPR036779 YPN_3592 YPN_3592 IPR038177 YPN_3592 YPN_3597 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YPN_3597 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPN_3597 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YPN_3597 IPR012080 Aspartate-semialdehyde dehydrogenase YPN_3597 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPN_3597 IPR036291 YPN_3597 YPN_3598 IPR002771 Multiple antibiotic resistance (MarC)-related YPN_3602 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPN_3602 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3602 IPR031322 YPN_3602 YPN_3603 IPR003474 Gluconate transporter YPN_3604 IPR000843 Transcription regulator HTH, LacI YPN_3604 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPN_3604 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3604 IPR028082 Periplasmic binding protein-like I YPN_3605 IPR003829 Pirin, N-terminal domain YPN_3605 IPR011051 RmlC-like cupin domain YPN_3605 IPR012093 Pirin YPN_3605 IPR014710 RmlC-like jelly roll fold YPN_3607 IPR001789 Signal transduction response regulator, receiver domain YPN_3607 IPR001867 Signal transduction response regulator, C-terminal YPN_3607 IPR011006 CheY-like superfamily YPN_3607 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3607 IPR036388 YPN_3607 YPN_3608 IPR011611 Carbohydrate kinase PfkB YPN_3608 IPR029056 Ribokinase-like YPN_3609 IPR000771 Ketose-bisphosphate aldolase, class-II YPN_3609 IPR013785 Aldolase-type TIM barrel YPN_3610 IPR010864 Protein of unknown function DUF1498 YPN_3610 IPR011051 RmlC-like cupin domain YPN_3610 IPR014710 RmlC-like jelly roll fold YPN_3611 IPR025997 Periplasmic binding protein domain YPN_3611 IPR028082 Periplasmic binding protein-like I YPN_3612 IPR001851 ABC transporter, permease YPN_3613 IPR003439 ABC transporter-like YPN_3613 IPR003593 AAA+ ATPase domain YPN_3613 IPR017871 ABC transporter, conserved site YPN_3613 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3614 IPR001789 Signal transduction response regulator, receiver domain YPN_3614 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3614 IPR003660 HAMP linker domain YPN_3614 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_3614 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_3614 IPR011006 CheY-like superfamily YPN_3614 IPR035965 YPN_3614 YPN_3614 IPR036097 YPN_3614 YPN_3614 IPR036890 YPN_3614 YPN_3615 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YPN_3615 IPR023166 HI0933 insert-like domain YPN_3615 IPR036188 YPN_3615 YPN_3616 IPR001204 Phosphate transporter YPN_3617 IPR002686 Transposase IS200-like YPN_3617 IPR036515 YPN_3617 YPN_3618 IPR019598 Universal stress protein B YPN_3619 IPR006015 Universal stress protein A YPN_3619 IPR006016 UspA YPN_3619 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_3620 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YPN_3620 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YPN_3620 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YPN_3620 IPR014362 Glutamate dehydrogenase YPN_3620 IPR033524 YPN_3620 YPN_3620 IPR036291 YPN_3620 YPN_3621 IPR006026 Peptidase, metallopeptidase YPN_3621 IPR011049 Serralysin-like metalloprotease, C-terminal YPN_3621 IPR013858 Peptidase M10 serralysin C-terminal domain YPN_3621 IPR016294 Peptidase M10B YPN_3621 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass YPN_3621 IPR024079 Metallopeptidase, catalytic domain YPN_3622 IPR007536 Ribosomal RNA small subunit methyltransferase J YPN_3622 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3623 IPR001567 Peptidase M3A/M3B YPN_3623 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPN_3625 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_3625 IPR007473 Ribosomal RNA large subunit methyltransferase J YPN_3625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3626 IPR001100 YPN_3626 YPN_3626 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPN_3626 IPR006322 Glutathione reductase, eukaryote/bacterial YPN_3626 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPN_3626 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPN_3626 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_3626 IPR036188 YPN_3626 YPN_3627 IPR008599 Putative sugar diacid recognition YPN_3627 IPR025736 PucR C-terminal helix-turn-helix domain YPN_3629 IPR003474 Gluconate transporter YPN_3630 IPR004381 Glycerate kinase YPN_3630 IPR018193 Glycerate kinase, flavodoxin-like domain YPN_3630 IPR018197 Glycerate kinase, restriction-enzyme-like fold YPN_3630 IPR036129 YPN_3630 YPN_3631 IPR010351 Protein of unknown function DUF943 YPN_3632 IPR010351 Protein of unknown function DUF943 YPN_3633 IPR017483 Conserved hypothetical protein CHP03034 YPN_3634 IPR004899 Pertactin, central region YPN_3634 IPR005546 Autotransporter beta-domain YPN_3634 IPR006315 Outer membrane autotransporter barrel YPN_3634 IPR011050 Pectin lyase fold/virulence factor YPN_3634 IPR012332 P22 tailspike C-terminal domain-like YPN_3634 IPR036709 YPN_3634 YPN_3635 IPR005274 Inner membrane protein YhjD YPN_3635 IPR017039 Virulence factor BrkB YPN_3636 IPR003763 CDP-diacylglycerol pyrophosphatase YPN_3636 IPR036265 YPN_3636 YPN_3636 IPR038433 YPN_3636 YPN_3637 IPR007844 AsmA YPN_3638 IPR001633 EAL domain YPN_3638 IPR035919 YPN_3638 YPN_3639 IPR004370 4-oxalocrotonate tautomerase YPN_3639 IPR014347 Tautomerase/MIF superfamily YPN_3639 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type YPN_3640 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPN_3640 IPR011611 Carbohydrate kinase PfkB YPN_3640 IPR029056 Ribokinase-like YPN_3641 IPR007863 Peptidase M16, C-terminal domain YPN_3641 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPN_3641 IPR011765 Peptidase M16, N-terminal YPN_3642 IPR001991 Sodium:dicarboxylate symporter YPN_3642 IPR018107 Sodium:dicarboxylate symporter, conserved site YPN_3642 IPR023954 C4-dicarboxylate transport protein YPN_3642 IPR036458 YPN_3642 YPN_3643 IPR000421 Coagulation factor 5/8 C-terminal type domain YPN_3643 IPR008979 Galactose-binding domain-like YPN_3644 IPR010702 Periplasmic pectate lyase YPN_3645 IPR009331 Oligogalacturonate-specific porin YPN_3646 IPR000160 GGDEF domain YPN_3646 IPR001633 EAL domain YPN_3646 IPR029787 Nucleotide cyclase YPN_3646 IPR033419 YPN_3646 YPN_3646 IPR035919 YPN_3646 YPN_3647 IPR002037 Glycoside hydrolase, family 8 YPN_3647 IPR008928 Six-hairpin glycosidase-like YPN_3647 IPR012341 Six-hairpin glycosidase YPN_3648 IPR003439 ABC transporter-like YPN_3648 IPR003593 AAA+ ATPase domain YPN_3648 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPN_3648 IPR017871 ABC transporter, conserved site YPN_3648 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3649 IPR003439 ABC transporter-like YPN_3649 IPR003593 AAA+ ATPase domain YPN_3649 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPN_3649 IPR017871 ABC transporter, conserved site YPN_3649 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3650 IPR000515 MetI-like domain YPN_3650 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPN_3650 IPR035906 YPN_3650 YPN_3651 IPR000515 MetI-like domain YPN_3651 IPR035906 YPN_3651 YPN_3652 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPN_3652 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPN_3652 IPR030678 YPN_3652 YPN_3653 IPR005565 Haemolysin activator HlyB YPN_3653 IPR013686 Polypeptide-transport-associated, ShlB-type YPN_3653 IPR027282 Two partner secretion pathway transporter YPN_3653 IPR035251 YPN_3653 YPN_3654 IPR008638 Filamentous haemagglutinin, N-terminal YPN_3654 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPN_3654 IPR011050 Pectin lyase fold/virulence factor YPN_3654 IPR012334 Pectin lyase fold YPN_3655 IPR000849 Sugar phosphate transporter YPN_3655 IPR011701 Major facilitator superfamily YPN_3655 IPR036259 YPN_3655 YPN_3656 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3656 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPN_3656 IPR036890 YPN_3656 YPN_3657 IPR001270 ClpA/B family YPN_3657 IPR002611 IstB-like ATP-binding protein YPN_3657 IPR003593 AAA+ ATPase domain YPN_3657 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3657 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3658 IPR001584 Integrase, catalytic core YPN_3658 IPR006120 Resolvase, HTH domain YPN_3658 IPR009057 Homeodomain-like YPN_3658 IPR012337 Ribonuclease H-like domain YPN_3659 IPR007895 MASE1 YPN_3660 IPR000792 Transcription regulator LuxR, C-terminal YPN_3660 IPR001789 Signal transduction response regulator, receiver domain YPN_3660 IPR011006 CheY-like superfamily YPN_3660 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3661 IPR000917 Sulfatase YPN_3661 IPR012549 Domain of unknown function DUF1705 YPN_3661 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_3661 IPR017850 Alkaline-phosphatase-like, core domain YPN_3662 IPR022742 Putative lysophospholipase YPN_3662 IPR029058 Alpha/Beta hydrolase fold YPN_3663 IPR002293 Amino acid/polyamine transporter I YPN_3663 IPR004840 Amino acid permease, conserved site YPN_3663 IPR004841 Amino acid permease/ SLC12A domain YPN_3664 IPR001106 Aromatic amino acid lyase YPN_3664 IPR005921 Histidine ammonia-lyase YPN_3664 IPR008948 L-Aspartase-like YPN_3664 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YPN_3664 IPR024083 Fumarase/histidase, N-terminal YPN_3665 IPR023636 Urocanase conserved site YPN_3665 IPR023637 Urocanase YPN_3665 IPR035085 YPN_3665 YPN_3665 IPR035400 YPN_3665 YPN_3665 IPR035401 YPN_3665 YPN_3665 IPR036190 YPN_3665 YPN_3665 IPR038364 YPN_3665 YPN_3666 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_3666 IPR036052 YPN_3666 YPN_3667 IPR000836 Phosphoribosyltransferase domain YPN_3667 IPR029057 Phosphoribosyltransferase-like YPN_3668 IPR000620 Drug/metabolite transporter YPN_3670 IPR002491 ABC transporter periplasmic binding domain YPN_3671 IPR000522 ABC transporter, permease protein YPN_3671 IPR037294 YPN_3671 YPN_3672 IPR000522 ABC transporter, permease protein YPN_3672 IPR037294 YPN_3672 YPN_3673 IPR003439 ABC transporter-like YPN_3673 IPR003593 AAA+ ATPase domain YPN_3673 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3674 IPR011204 Virulence protein RhuM-like YPN_3676 IPR001387 Cro/C1-type helix-turn-helix domain YPN_3676 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3677 IPR025668 Transposase DDE domain YPN_3680 IPR002104 Integrase, catalytic YPN_3680 IPR010998 Integrase, Lambda-type, N-terminal YPN_3680 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_3680 IPR013762 Integrase-like, catalytic core YPN_3680 IPR025166 Domain of unknown function DUF4102 YPN_3680 IPR038488 YPN_3680 YPN_3681 IPR009057 Homeodomain-like YPN_3681 IPR018060 DNA binding HTH domain, AraC-type YPN_3681 IPR018062 HTH domain AraC-type, conserved site YPN_3681 IPR020449 Transcription regulator HTH, AraC- type YPN_3681 IPR028082 Periplasmic binding protein-like I YPN_3682 IPR001851 ABC transporter, permease YPN_3683 IPR003439 ABC transporter-like YPN_3683 IPR003593 AAA+ ATPase domain YPN_3683 IPR013455 ABC transporter, D-xylose, ATP-binding protein YPN_3683 IPR017871 ABC transporter, conserved site YPN_3683 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3684 IPR013456 D-xylose ABC transporter, substrate-binding protein YPN_3684 IPR025997 Periplasmic binding protein domain YPN_3684 IPR028082 Periplasmic binding protein-like I YPN_3685 IPR001998 Xylose isomerase YPN_3685 IPR013452 Xylose isomerase, bacterial-type YPN_3685 IPR036237 YPN_3685 YPN_3686 IPR000577 YPN_3686 YPN_3686 IPR006000 Xylulokinase YPN_3686 IPR018483 Carbohydrate kinase, FGGY, conserved site YPN_3686 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_3686 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_3687 IPR000259 Fimbrial-type adhesion domain YPN_3687 IPR008966 Adhesion domain YPN_3687 IPR036937 YPN_3687 YPN_3688 IPR001829 Pili assembly chaperone, bacterial YPN_3688 IPR008962 PapD-like YPN_3688 IPR013783 Immunoglobulin-like fold YPN_3688 IPR016147 PapD, N-terminal, bacterial YPN_3688 IPR016148 Pili assembly chaperone, C-terminal domain YPN_3688 IPR018046 Pili assembly chaperone, conserved site YPN_3688 IPR036316 YPN_3688 YPN_3689 IPR000015 Outer membrane usher protein YPN_3689 IPR025949 PapC-like, C-terminal domain YPN_3690 IPR000015 Outer membrane usher protein YPN_3690 IPR018030 Fimbrial membrane usher, conserved site YPN_3690 IPR025885 PapC, N-terminal domain YPN_3690 IPR037224 YPN_3690 YPN_3691 IPR000259 Fimbrial-type adhesion domain YPN_3691 IPR008966 Adhesion domain YPN_3691 IPR036937 YPN_3691 YPN_3692 IPR002656 Acyltransferase 3 YPN_3692 IPR032905 YPN_3692 YPN_3693 IPR009057 Homeodomain-like YPN_3693 IPR010921 Trp repressor/replication initiator YPN_3694 IPR001584 Integrase, catalytic core YPN_3694 IPR012337 Ribonuclease H-like domain YPN_3694 IPR025948 HTH-like domain YPN_3694 IPR036397 YPN_3694 YPN_3695 IPR011701 Major facilitator superfamily YPN_3695 IPR036259 YPN_3695 YPN_3697 IPR025320 Protein of unknown function DUF4225 YPN_3699 IPR002513 Tn3 transposase DDE domain YPN_3700 IPR000795 Elongation factor, GTP-binding domain YPN_3700 IPR004535 Translation elongation factor, selenocysteine-specific YPN_3700 IPR009000 Translation protein, beta-barrel domain YPN_3700 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPN_3700 IPR015190 Translation elongation factor SelB, winged helix, type 2 YPN_3700 IPR015191 Translation elongation factor SelB, winged helix, type 3 YPN_3700 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3700 IPR031157 YPN_3700 YPN_3700 IPR036388 YPN_3700 YPN_3700 IPR036390 YPN_3700 YPN_3701 IPR004534 L-seryl-tRNA selenium transferase YPN_3701 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3701 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3701 IPR018319 L-seryl-tRNA selenium transferase-like YPN_3701 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YPN_3702 IPR006452 Formate dehydrogenase accessory protein YPN_3702 IPR024064 FdhE-like YPN_3703 IPR006471 Formate dehydrogenase, gamma subunit YPN_3703 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPN_3703 IPR016174 Di-haem cytochrome, transmembrane YPN_3704 IPR006470 Formate dehydrogenase, beta subunit YPN_3704 IPR014603 Formate dehydrogenase, iron-sulphur subunit YPN_3704 IPR015246 Formate dehydrogenase, transmembrane YPN_3704 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPN_3704 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPN_3704 IPR038384 YPN_3704 YPN_3705 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic YPN_3705 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPN_3705 IPR006656 Molybdopterin oxidoreductase YPN_3705 IPR006657 Molydopterin dinucleotide-binding domain YPN_3705 IPR009010 Aspartate decarboxylase-like domain YPN_3706 IPR006656 Molybdopterin oxidoreductase YPN_3706 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPN_3706 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPN_3707 IPR003786 Protein FdhD YPN_3707 IPR016193 Cytidine deaminase-like YPN_3708 IPR001189 Manganese/iron superoxide dismutase YPN_3708 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPN_3708 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPN_3708 IPR019833 Manganese/iron superoxide dismutase, binding site YPN_3708 IPR036314 YPN_3708 YPN_3708 IPR036324 YPN_3708 YPN_3709 IPR003660 HAMP linker domain YPN_3709 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPN_3709 IPR004090 Chemotaxis methyl-accepting receptor YPN_3709 IPR032255 YPN_3709 YPN_3711 IPR019545 DM13 domain YPN_3712 IPR021230 Protein of unknown function DUF2810 YPN_3713 IPR007761 Mannitol repressor YPN_3713 IPR038026 YPN_3713 YPN_3714 IPR000669 Mannitol dehydrogenase YPN_3714 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_3714 IPR013118 Mannitol dehydrogenase, C-terminal YPN_3714 IPR013131 Mannitol dehydrogenase, N-terminal YPN_3714 IPR013328 Dehydrogenase, multihelical YPN_3714 IPR023027 Mannitol dehydrogenase, conserved site YPN_3714 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YPN_3714 IPR036291 YPN_3714 YPN_3715 IPR002178 PTS EIIA type-2 domain YPN_3715 IPR003352 Phosphotransferase system, EIIC YPN_3715 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPN_3715 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC YPN_3715 IPR016152 Phosphotransferase/anion transporter YPN_3715 IPR036095 YPN_3715 YPN_3716 IPR021413 Protein of unknown function DUF3053 YPN_3717 IPR008909 DALR anticodon binding YPN_3717 IPR015944 Glycine-tRNA ligase, beta subunit YPN_3718 IPR002310 Glycine-tRNA ligase, alpha subunit YPN_3719 IPR004597 DNA-3-methyladenine glycosylase I YPN_3719 IPR005019 Methyladenine glycosylase YPN_3719 IPR011257 DNA glycosylase YPN_3720 IPR000182 GNAT domain YPN_3720 IPR016181 Acyl-CoA N-acyltransferase YPN_3721 IPR006664 Outer membrane protein, bacterial YPN_3721 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPN_3721 IPR036737 YPN_3721 YPN_3721 IPR039567 YPN_3721 YPN_3722 IPR036388 YPN_3722 YPN_3722 IPR036390 YPN_3722 YPN_3723 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPN_3723 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPN_3723 IPR023756 Glyoxylate/hydroxypyruvate reductase B YPN_3723 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPN_3723 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPN_3723 IPR036291 YPN_3723 YPN_3724 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPN_3724 IPR014635 Alpha-amylase, MalS type YPN_3724 IPR017853 Glycoside hydrolase, superfamily YPN_3726 IPR004839 Aminotransferase, class I/classII YPN_3726 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3726 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3727 IPR006037 Regulator of K+ conductance, C-terminal YPN_3727 IPR006512 YidE/YbjL duplication YPN_3727 IPR023018 Transport protein YidE, putative YPN_3727 IPR036721 YPN_3727 YPN_3728 IPR002068 Alpha crystallin/Hsp20 domain YPN_3728 IPR008978 HSP20-like chaperone YPN_3728 IPR022848 Small heat shock protein IbpB YPN_3729 IPR002068 Alpha crystallin/Hsp20 domain YPN_3729 IPR008978 HSP20-like chaperone YPN_3729 IPR023728 Small heat shock protein IbpA YPN_3730 IPR010780 Protein of unknown function DUF1375 YPN_3731 IPR011042 Six-bladed beta-propeller, TolB-like YPN_3731 IPR011659 WD40-like Beta Propeller YPN_3733 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPN_3733 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPN_3733 IPR036052 YPN_3733 YPN_3734 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPN_3734 IPR023401 Ornithine cyclodeaminase, N-terminal YPN_3734 IPR036291 YPN_3734 YPN_3735 IPR009057 Homeodomain-like YPN_3735 IPR010921 Trp repressor/replication initiator YPN_3736 IPR001584 Integrase, catalytic core YPN_3736 IPR012337 Ribonuclease H-like domain YPN_3736 IPR025948 HTH-like domain YPN_3736 IPR036397 YPN_3736 YPN_3737 IPR003171 Methylenetetrahydrofolate reductase YPN_3737 IPR004620 5,10-methylenetetrahydrofolate reductase YPN_3737 IPR029041 FAD-linked oxidoreductase-like YPN_3738 IPR001048 Aspartate/glutamate/uridylate kinase YPN_3738 IPR001341 Aspartate kinase domain YPN_3738 IPR001342 Homoserine dehydrogenase, catalytic YPN_3738 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPN_3738 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPN_3738 IPR018042 Aspartate kinase, conserved site YPN_3738 IPR019811 Homoserine dehydrogenase, conserved site YPN_3738 IPR036291 YPN_3738 YPN_3738 IPR036393 YPN_3738 YPN_3739 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPN_3739 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3739 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3740 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPN_3740 IPR011821 O-succinylhomoserine (thiol)-lyase YPN_3740 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3740 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3740 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3741 IPR002084 Methionine repressor MetJ YPN_3741 IPR010985 Ribbon-helix-helix YPN_3741 IPR023453 Methionine repressor MetJ domain YPN_3742 IPR008024 YiaAB two helix YPN_3743 IPR002150 Ribosomal protein L31 YPN_3743 IPR027491 Ribosomal protein L31 type A YPN_3743 IPR034704 YPN_3743 YPN_3744 IPR001650 Helicase, C-terminal YPN_3744 IPR005259 Primosomal protein n YPN_3744 IPR011545 DEAD/DEAH box helicase domain YPN_3744 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_3744 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3745 IPR000843 Transcription regulator HTH, LacI YPN_3745 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3745 IPR028082 Periplasmic binding protein-like I YPN_3746 IPR007730 Sporulation-related domain YPN_3746 IPR011930 Cell division protein FtsN YPN_3746 IPR036680 YPN_3746 YPN_3747 IPR001353 Proteasome, subunit alpha/beta YPN_3747 IPR022281 ATP-dependent protease, HslV subunit YPN_3747 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_3748 IPR003593 AAA+ ATPase domain YPN_3748 IPR003959 ATPase, AAA-type, core YPN_3748 IPR004491 Heat shock protein HslU YPN_3748 IPR019489 Clp ATPase, C-terminal YPN_3748 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3749 IPR000537 UbiA prenyltransferase family YPN_3749 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPN_3749 IPR026046 UbiA prenyltransferase domain containing protein 1 YPN_3750 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YPN_3750 IPR010203 Regulator of ribonuclease activity A YPN_3750 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YPN_3750 IPR036704 YPN_3750 YPN_3751 IPR025326 Protein of unknown function DUF4232 YPN_3753 IPR003997 RTX secretion protein D, Gram-negative bacteria YPN_3753 IPR006144 Secretion protein HlyD, conserved site YPN_3753 IPR011053 Single hybrid motif YPN_3754 IPR003439 ABC transporter-like YPN_3754 IPR003593 AAA+ ATPase domain YPN_3754 IPR005074 Peptidase C39, bacteriocin processing YPN_3754 IPR011527 ABC transporter type 1, transmembrane domain YPN_3754 IPR017871 ABC transporter, conserved site YPN_3754 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3754 IPR036640 YPN_3754 YPN_3755 IPR002686 Transposase IS200-like YPN_3755 IPR036515 YPN_3755 YPN_3756 IPR009252 Cell division protein ZapB YPN_3757 IPR000425 Major intrinsic protein YPN_3757 IPR022357 Major intrinsic protein, conserved site YPN_3757 IPR023271 Aquaporin-like YPN_3758 IPR000577 YPN_3758 YPN_3758 IPR005999 Glycerol kinase YPN_3758 IPR018483 Carbohydrate kinase, FGGY, conserved site YPN_3758 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPN_3758 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPN_3759 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YPN_3760 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPN_3760 IPR008333 Oxidoreductase, FAD-binding domain YPN_3760 IPR017938 Riboflavin synthase-like beta-barrel YPN_3760 IPR039261 YPN_3760 YPN_3761 IPR008523 Lactobacillus phage LBR48, DUF805 YPN_3762 IPR009918 Protein of unknown function DUF1454 YPN_3763 IPR000652 Triosephosphate isomerase YPN_3763 IPR013785 Aldolase-type TIM barrel YPN_3763 IPR020861 Triosephosphate isomerase, active site YPN_3763 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YPN_3763 IPR035990 YPN_3763 YPN_3764 IPR000847 Transcription regulator HTH, LysR YPN_3764 IPR005119 LysR, substrate-binding YPN_3764 IPR036388 YPN_3764 YPN_3764 IPR036390 YPN_3764 YPN_3765 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPN_3765 IPR024078 Putative deacetylase LmbE-like domain YPN_3766 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YPN_3766 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YPN_3766 IPR036704 YPN_3766 YPN_3767 IPR001898 Sodium/sulphate symporter YPN_3767 IPR030676 YPN_3767 YPN_3769 IPR005669 Thiosulphate/Sulfate-binding protein YPN_3769 IPR034408 YPN_3769 YPN_3770 IPR000023 Phosphofructokinase domain YPN_3770 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type YPN_3770 IPR012828 6-phosphofructokinase YPN_3770 IPR015912 Phosphofructokinase, conserved site YPN_3770 IPR022953 Phosphofructokinase YPN_3770 IPR035966 YPN_3770 YPN_3771 IPR002524 Cation efflux protein YPN_3771 IPR023783 Cation efflux pump FieF YPN_3771 IPR027469 Cation efflux protein transmembrane domain YPN_3771 IPR027470 Cation efflux protein cytoplasmic domain YPN_3771 IPR036837 YPN_3771 YPN_3773 IPR006842 Transposase (putative), YhgA-like YPN_3773 IPR010106 Conserved hypothetical protein CHP01784 YPN_3775 IPR002104 Integrase, catalytic YPN_3775 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_3775 IPR013762 Integrase-like, catalytic core YPN_3776 IPR012899 LTXXQ motif family protein YPN_3777 IPR001789 Signal transduction response regulator, receiver domain YPN_3777 IPR001867 Signal transduction response regulator, C-terminal YPN_3777 IPR011006 CheY-like superfamily YPN_3777 IPR036388 YPN_3777 YPN_3778 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3778 IPR003660 HAMP linker domain YPN_3778 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_3778 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_3778 IPR032404 YPN_3778 YPN_3778 IPR036097 YPN_3778 YPN_3778 IPR036890 YPN_3778 YPN_3778 IPR038515 YPN_3778 YPN_3779 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPN_3779 IPR004026 Ada DNA repair, metal-binding YPN_3779 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPN_3779 IPR009057 Homeodomain-like YPN_3779 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPN_3779 IPR016221 Bifunctional regulatory protein Ada YPN_3779 IPR018060 DNA binding HTH domain, AraC-type YPN_3779 IPR035451 YPN_3779 YPN_3779 IPR036217 YPN_3779 YPN_3779 IPR036388 YPN_3779 YPN_3779 IPR036631 YPN_3779 YPN_3780 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPN_3780 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YPN_3780 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_3780 IPR029028 Alpha/beta knot methyltransferases YPN_3781 IPR001451 Bacterial transferase hexapeptide repeat YPN_3781 IPR005881 Serine O-acetyltransferase YPN_3781 IPR010493 Serine acetyltransferase, N-terminal YPN_3781 IPR011004 Trimeric LpxA-like YPN_3781 IPR018357 Hexapeptide transferase, conserved site YPN_3782 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YPN_3782 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YPN_3782 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPN_3782 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YPN_3782 IPR013328 Dehydrogenase, multihelical YPN_3782 IPR036291 YPN_3782 YPN_3783 IPR003708 Bacterial protein export chaperone SecB YPN_3783 IPR035958 YPN_3783 YPN_3784 IPR002109 Glutaredoxin YPN_3784 IPR011767 Glutaredoxin active site YPN_3784 IPR011900 Glutaredoxin, GrxC YPN_3784 IPR014025 Glutaredoxin subgroup YPN_3784 IPR036249 YPN_3784 YPN_3785 IPR001763 Rhodanese-like domain YPN_3785 IPR036873 YPN_3785 YPN_3786 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YPN_3786 IPR006124 Metalloenzyme YPN_3786 IPR011258 BPG-independent PGAM, N-terminal YPN_3786 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPN_3786 IPR017850 Alkaline-phosphatase-like, core domain YPN_3786 IPR036646 YPN_3786 YPN_3787 IPR011055 Duplicated hybrid motif YPN_3787 IPR016047 Peptidase M23 YPN_3788 IPR006837 Protein of unknown function DUF610, YibQ YPN_3788 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_3789 IPR006837 Protein of unknown function DUF610, YibQ YPN_3789 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPN_3790 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPN_3790 IPR004627 L-threonine 3-dehydrogenase YPN_3790 IPR011032 GroES (chaperonin 10)-like YPN_3790 IPR013149 Alcohol dehydrogenase, C-terminal YPN_3790 IPR013154 Alcohol dehydrogenase GroES-like YPN_3790 IPR020843 Polyketide synthase, enoylreductase YPN_3790 IPR036291 YPN_3790 YPN_3791 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPN_3791 IPR004839 Aminotransferase, class I/classII YPN_3791 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPN_3791 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3791 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3791 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3792 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPN_3792 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YPN_3792 IPR036291 YPN_3792 YPN_3793 IPR002201 Glycosyl transferase, family 9 YPN_3793 IPR011910 Lipopolysaccharide heptosyltransferase II YPN_3794 IPR002201 Glycosyl transferase, family 9 YPN_3794 IPR011908 Lipopolysaccharide heptosyltransferase I YPN_3795 IPR001296 Glycosyl transferase, family 1 YPN_3795 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YPN_3795 IPR038107 YPN_3795 YPN_3796 IPR001173 Glycosyltransferase 2-like YPN_3796 IPR029044 Nucleotide-diphospho-sugar transferases YPN_3797 IPR001980 Coenzyme A biosynthesis protein YPN_3797 IPR004821 Cytidyltransferase-like domain YPN_3797 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_3798 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YPN_3798 IPR010979 Ribosomal protein S13-like, H2TH YPN_3798 IPR012319 DNA glycosylase/AP lyase, catalytic domain YPN_3798 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YPN_3798 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YPN_3798 IPR020629 Formamidopyrimidine-DNA glycosylase YPN_3798 IPR035937 YPN_3798 YPN_3799 IPR001705 Ribosomal protein L33 YPN_3799 IPR011332 Zinc-binding ribosomal protein YPN_3799 IPR018264 Ribosomal protein L33, conserved site YPN_3799 IPR038584 YPN_3799 YPN_3800 IPR001383 Ribosomal protein L28 YPN_3800 IPR026569 Ribosomal protein L28/L24 YPN_3800 IPR034704 YPN_3800 YPN_3800 IPR037147 YPN_3800 YPN_3801 IPR001405 RadC protein YPN_3801 IPR010994 RuvA domain 2-like YPN_3801 IPR020891 Uncharacterised protein family UPF0758, conserved site YPN_3801 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPN_3801 IPR025657 RadC-like JAB domain YPN_3802 IPR003382 Flavoprotein YPN_3802 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPN_3802 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPN_3802 IPR035929 YPN_3802 YPN_3802 IPR036551 YPN_3802 YPN_3803 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YPN_3803 IPR029054 dUTPase-like YPN_3803 IPR036157 YPN_3803 YPN_3804 IPR001647 DNA-binding HTH domain, TetR-type YPN_3804 IPR009057 Homeodomain-like YPN_3804 IPR023769 Nucleoid occlusion factor SlmA YPN_3804 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPN_3804 IPR036271 YPN_3804 YPN_3805 IPR000836 Phosphoribosyltransferase domain YPN_3805 IPR004467 Orotate phosphoribosyl transferase domain YPN_3805 IPR023031 Orotate phosphoribosyltransferase YPN_3805 IPR029057 Phosphoribosyltransferase-like YPN_3806 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPN_3806 IPR002381 Ribonuclease phosphorolytic, bacterial-type YPN_3806 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPN_3806 IPR018336 Ribonuclease PH, conserved site YPN_3806 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_3806 IPR027408 PNPase/RNase PH domain YPN_3806 IPR036345 YPN_3806 YPN_3807 IPR005229 Conserved hypothetical protein CHP00255 YPN_3807 IPR013527 YicC-like, N-terminal YPN_3807 IPR013551 Domain of unknown function DUF1732 YPN_3808 IPR005115 Uncharacterised domain UPF0126 YPN_3809 IPR004150 NAD-dependent DNA ligase, OB-fold YPN_3809 IPR010994 RuvA domain 2-like YPN_3809 IPR012340 Nucleic acid-binding, OB-fold YPN_3809 IPR013839 NAD-dependent DNA ligase, adenylation YPN_3809 IPR013840 NAD-dependent DNA ligase, N-terminal YPN_3809 IPR020923 DNA ligase B YPN_3810 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPN_3810 IPR017665 Guanylate kinase YPN_3810 IPR020590 Guanylate kinase, conserved site YPN_3810 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3811 IPR003716 DNA-directed RNA polymerase, omega subunit YPN_3811 IPR006110 RNA polymerase, subunit omega/K/RPB6 YPN_3811 IPR012293 RNA polymerase subunit, RPB6/omega YPN_3811 IPR036161 YPN_3811 YPN_3812 IPR002912 ACT domain YPN_3812 IPR003607 HD/PDEase domain YPN_3812 IPR004095 TGS YPN_3812 IPR004811 RelA/SpoT family YPN_3812 IPR007685 RelA/SpoT YPN_3812 IPR012675 Beta-grasp domain YPN_3812 IPR012676 TGS-like YPN_3813 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPN_3813 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YPN_3813 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPN_3813 IPR029028 Alpha/beta knot methyltransferases YPN_3813 IPR033671 YPN_3813 YPN_3814 IPR001650 Helicase, C-terminal YPN_3814 IPR004609 ATP-dependent DNA helicase RecG YPN_3814 IPR011545 DEAD/DEAH box helicase domain YPN_3814 IPR012340 Nucleic acid-binding, OB-fold YPN_3814 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_3814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3814 IPR033454 YPN_3814 YPN_3815 IPR004445 Sodium/glutamate symporter YPN_3816 IPR006042 Xanthine/uracil permease YPN_3816 IPR006043 Xanthine/uracil/vitamin C permease YPN_3816 IPR017588 Xanthine permease YPN_3818 IPR000182 GNAT domain YPN_3818 IPR012660 Thioesterase, putative YPN_3818 IPR016181 Acyl-CoA N-acyltransferase YPN_3818 IPR029069 HotDog domain YPN_3819 IPR001584 Integrase, catalytic core YPN_3819 IPR006120 Resolvase, HTH domain YPN_3819 IPR009057 Homeodomain-like YPN_3819 IPR012337 Ribonuclease H-like domain YPN_3820 IPR001270 ClpA/B family YPN_3820 IPR002611 IstB-like ATP-binding protein YPN_3820 IPR003593 AAA+ ATPase domain YPN_3820 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3820 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3821 IPR001451 Bacterial transferase hexapeptide repeat YPN_3821 IPR011004 Trimeric LpxA-like YPN_3822 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPN_3822 IPR011342 Shikimate dehydrogenase YPN_3822 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPN_3822 IPR022893 Shikimate, quinate/shikimate dehydrogenase YPN_3822 IPR036291 YPN_3822 YPN_3823 IPR006070 YrdC-like domain YPN_3823 IPR017945 DHBP synthase RibB-like alpha/beta domain YPN_3823 IPR023535 Threonylcarbamoyl-AMP synthase YPN_3824 IPR013498 DNA topoisomerase, type IA, zn finger YPN_3825 IPR007456 Protein of unknown function DUF494 YPN_3826 IPR003488 DNA recombination-mediator protein A YPN_3827 IPR023635 Peptide deformylase YPN_3827 IPR036821 YPN_3827 YPN_3828 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPN_3828 IPR002376 Formyl transferase, N-terminal YPN_3828 IPR005793 Formyl transferase, C-terminal YPN_3828 IPR005794 Methionyl-tRNA formyltransferase YPN_3828 IPR011034 Formyl transferase, C-terminal-like YPN_3828 IPR036477 YPN_3828 YPN_3828 IPR037022 YPN_3828 YPN_3829 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p YPN_3829 IPR004573 rRNA small subunit methyltransferase B YPN_3829 IPR006027 NusB/RsmB/TIM44 YPN_3829 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YPN_3829 IPR023267 RNA (C5-cytosine) methyltransferase YPN_3829 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YPN_3829 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3829 IPR035926 YPN_3829 YPN_3830 IPR003148 Regulator of K+ conductance, N-terminal YPN_3830 IPR006036 Potassium uptake protein TrkA YPN_3830 IPR006037 Regulator of K+ conductance, C-terminal YPN_3830 IPR036291 YPN_3830 YPN_3830 IPR036721 YPN_3830 YPN_3831 IPR001185 Large-conductance mechanosensitive channel YPN_3831 IPR019823 Large-conductance mechanosensitive channel, conserved site YPN_3831 IPR036019 YPN_3831 YPN_3831 IPR037673 YPN_3831 YPN_3832 IPR005589 Protein of unknown function DUF331 YPN_3833 IPR000551 MerR-type HTH domain YPN_3833 IPR009061 DNA binding domain, putative YPN_3833 IPR011788 Zn(II)-responsive transcriptional regulator YPN_3834 IPR000456 Ribosomal protein L17 YPN_3834 IPR036373 YPN_3834 YPN_3835 IPR011260 RNA polymerase, alpha subunit, C-terminal YPN_3835 IPR011262 DNA-directed RNA polymerase, insert domain YPN_3835 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YPN_3835 IPR011773 DNA-directed RNA polymerase, alpha subunit YPN_3835 IPR036603 YPN_3835 YPN_3835 IPR036643 YPN_3835 YPN_3836 IPR001912 Ribosomal protein S4/S9, N-terminal YPN_3836 IPR002942 RNA-binding S4 domain YPN_3836 IPR005709 Ribosomal protein S4, bacterial-type YPN_3836 IPR018079 Ribosomal protein S4, conserved site YPN_3836 IPR036986 YPN_3836 YPN_3837 IPR001971 Ribosomal protein S11 YPN_3837 IPR018102 Ribosomal S11, conserved site YPN_3837 IPR019981 Ribosomal protein S11, bacterial-type YPN_3837 IPR036967 YPN_3837 YPN_3838 IPR001892 Ribosomal protein S13 YPN_3838 IPR010979 Ribosomal protein S13-like, H2TH YPN_3838 IPR018269 Ribosomal protein S13, conserved site YPN_3838 IPR019980 Ribosomal protein S13, bacterial-type YPN_3838 IPR027437 30s ribosomal protein S13, C-terminal YPN_3839 IPR002208 SecY/SEC61-alpha family YPN_3839 IPR023201 SecY subunit domain YPN_3839 IPR026593 Protein translocase subunit SecY YPN_3839 IPR030659 YPN_3839 YPN_3840 IPR001196 Ribosomal protein L15, conserved site YPN_3840 IPR005749 Ribosomal protein L15, bacterial-type YPN_3840 IPR021131 Ribosomal protein L18e/L15P YPN_3840 IPR030878 YPN_3840 YPN_3840 IPR036227 YPN_3840 YPN_3841 IPR005996 Ribosomal protein L30, bacterial-type YPN_3841 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPN_3841 IPR018038 Ribosomal protein L30, conserved site YPN_3841 IPR036919 YPN_3841 YPN_3842 IPR005324 Ribosomal protein S5, C-terminal YPN_3842 IPR005712 Ribosomal protein S5, bacterial-type YPN_3842 IPR013810 Ribosomal protein S5, N-terminal YPN_3842 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_3842 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPN_3842 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_3843 IPR004389 Ribosomal protein L18, bacterial-type YPN_3843 IPR005484 Ribosomal protein L18/L5 YPN_3844 IPR000702 Ribosomal protein L6 YPN_3844 IPR002358 Ribosomal protein L6, conserved site YPN_3844 IPR019906 Ribosomal protein L6, bacterial-type YPN_3844 IPR020040 Ribosomal protein L6, alpha-beta domain YPN_3844 IPR036789 YPN_3844 YPN_3845 IPR000630 Ribosomal protein S8 YPN_3845 IPR035987 YPN_3845 YPN_3846 IPR001209 Ribosomal protein S14 YPN_3846 IPR018271 Ribosomal protein S14, conserved site YPN_3846 IPR023036 Ribosomal protein S14, bacterial/plastid YPN_3847 IPR002132 Ribosomal protein L5 YPN_3847 IPR020930 Ribosomal protein L5, bacterial-type YPN_3847 IPR022803 Ribosomal protein L5 domain YPN_3847 IPR031309 YPN_3847 YPN_3847 IPR031310 YPN_3847 YPN_3848 IPR003256 Ribosomal protein L24 YPN_3848 IPR005824 KOW YPN_3848 IPR005825 Ribosomal protein L24/L26, conserved site YPN_3848 IPR008991 Translation protein SH3-like domain YPN_3848 IPR014722 Ribosomal protein L2 domain 2 YPN_3849 IPR000218 Ribosomal protein L14b/L23e YPN_3849 IPR005745 Ribosomal protein L14, bacterial-type YPN_3849 IPR019972 Ribosomal protein L14 conserved site YPN_3849 IPR036853 YPN_3849 YPN_3850 IPR000266 Ribosomal protein S17 YPN_3850 IPR012340 Nucleic acid-binding, OB-fold YPN_3850 IPR019979 Ribosomal protein S17, conserved site YPN_3850 IPR019984 Ribosomal protein S17, bacterial-type YPN_3851 IPR001854 Ribosomal protein L29 YPN_3851 IPR018254 Ribosomal protein L29, conserved site YPN_3851 IPR036049 YPN_3851 YPN_3852 IPR000114 Ribosomal protein L16 YPN_3852 IPR016180 Ribosomal protein L10e/L16 YPN_3852 IPR020798 Ribosomal protein L16, conserved site YPN_3852 IPR036920 YPN_3852 YPN_3853 IPR001351 Ribosomal protein S3, C-terminal YPN_3853 IPR004044 K Homology domain, type 2 YPN_3853 IPR004087 K Homology domain YPN_3853 IPR005704 Ribosomal protein S3, bacterial YPN_3853 IPR009019 K homology domain, prokaryotic type YPN_3853 IPR015946 K homology domain-like, alpha/beta YPN_3853 IPR018280 Ribosomal protein S3, conserved site YPN_3853 IPR036419 YPN_3853 YPN_3854 IPR001063 Ribosomal protein L22/L17 YPN_3854 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YPN_3854 IPR018260 Ribosomal protein L22/L17, conserved site YPN_3854 IPR036394 YPN_3854 YPN_3855 IPR002222 Ribosomal protein S19/S15 YPN_3855 IPR005732 Ribosomal protein S19, bacterial-type YPN_3855 IPR020934 Ribosomal protein S19 conserved site YPN_3855 IPR023575 Ribosomal protein S19, superfamily YPN_3856 IPR002171 Ribosomal protein L2 YPN_3856 IPR005880 Ribosomal protein L2, bacterial/organellar-type YPN_3856 IPR008991 Translation protein SH3-like domain YPN_3856 IPR012340 Nucleic acid-binding, OB-fold YPN_3856 IPR014722 Ribosomal protein L2 domain 2 YPN_3856 IPR014726 Ribosomal protein L2, domain 3 YPN_3856 IPR022666 Ribosomal Proteins L2, RNA binding domain YPN_3856 IPR022669 Ribosomal protein L2, C-terminal YPN_3856 IPR022671 Ribosomal protein L2, conserved site YPN_3857 IPR001014 Ribosomal protein L23/L25, conserved site YPN_3857 IPR012677 Nucleotide-binding, alpha-beta plait YPN_3857 IPR012678 Ribosomal protein L23/L15e core domain YPN_3857 IPR013025 Ribosomal protein L25/L23 YPN_3858 IPR002136 Ribosomal protein L4/L1e YPN_3858 IPR013005 Ribosomal protein L4/L1e, bacterial-type YPN_3858 IPR023574 Ribosomal protein L4 domain YPN_3859 IPR000597 Ribosomal protein L3 YPN_3859 IPR009000 Translation protein, beta-barrel domain YPN_3859 IPR019926 Ribosomal protein L3, conserved site YPN_3859 IPR019927 Ribosomal protein L3, bacterial/organelle-type YPN_3860 IPR001848 Ribosomal protein S10 YPN_3860 IPR018268 Ribosomal protein S10, conserved site YPN_3860 IPR027486 Ribosomal protein S10 domain YPN_3860 IPR036838 YPN_3860 YPN_3861 IPR002024 Bacterioferritin YPN_3861 IPR008331 Ferritin/DPS protein domain YPN_3861 IPR009078 Ferritin-like superfamily YPN_3861 IPR012347 Ferritin-related YPN_3862 IPR007419 BFD-like [2Fe-2S]-binding domain YPN_3863 IPR002686 Transposase IS200-like YPN_3863 IPR036515 YPN_3863 YPN_3864 IPR000795 Elongation factor, GTP-binding domain YPN_3864 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPN_3864 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPN_3864 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPN_3864 IPR005225 Small GTP-binding protein domain YPN_3864 IPR009000 Translation protein, beta-barrel domain YPN_3864 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPN_3864 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3864 IPR031157 YPN_3864 YPN_3865 IPR000640 Translation elongation factor EFG, V domain YPN_3865 IPR000795 Elongation factor, GTP-binding domain YPN_3865 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPN_3865 IPR004540 Translation elongation factor EFG/EF2 YPN_3865 IPR005225 Small GTP-binding protein domain YPN_3865 IPR005517 Translation elongation factor EFG/EF2, domain IV YPN_3865 IPR009000 Translation protein, beta-barrel domain YPN_3865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_3865 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_3865 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3865 IPR031157 YPN_3865 YPN_3865 IPR035647 YPN_3865 YPN_3866 IPR000235 Ribosomal protein S5/S7 YPN_3866 IPR005717 Ribosomal protein S7, bacterial/organellar-type YPN_3866 IPR020606 Ribosomal protein S7, conserved site YPN_3866 IPR023798 Ribosomal protein S7 domain YPN_3866 IPR036823 YPN_3866 YPN_3867 IPR005679 Ribosomal protein S12, bacteria YPN_3867 IPR006032 Ribosomal protein S12/S23 YPN_3867 IPR012340 Nucleic acid-binding, OB-fold YPN_3868 IPR007215 Sulphur relay, TusB/DsrH YPN_3868 IPR023526 Sulphur relay, TusB YPN_3868 IPR027396 DsrEFH-like YPN_3869 IPR003787 Sulphur relay, DsrE/F-like protein YPN_3869 IPR017462 Sulphur relay, TusC/DsrF YPN_3869 IPR027396 DsrEFH-like YPN_3869 IPR037450 YPN_3869 YPN_3870 IPR003787 Sulphur relay, DsrE/F-like protein YPN_3870 IPR017463 Sulphur relay, TusD/DsrE YPN_3870 IPR027396 DsrEFH-like YPN_3871 IPR013559 YheO-like YPN_3871 IPR039445 YPN_3871 YPN_3872 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPN_3872 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPN_3872 IPR036944 YPN_3872 YPN_3873 IPR007236 SlyX YPN_3874 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPN_3875 IPR012658 Conserved hypothetical protein CHP02443 YPN_3876 IPR003148 Regulator of K+ conductance, N-terminal YPN_3876 IPR004771 K+/H+ exchanger YPN_3876 IPR006153 Cation/H+ exchanger YPN_3876 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YPN_3876 IPR036291 YPN_3876 YPN_3876 IPR038770 YPN_3876 YPN_3877 IPR003680 Flavodoxin-like fold YPN_3877 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YPN_3877 IPR029039 Flavoprotein-like YPN_3878 IPR003439 ABC transporter-like YPN_3878 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3879 IPR003439 ABC transporter-like YPN_3879 IPR003593 AAA+ ATPase domain YPN_3879 IPR017871 ABC transporter, conserved site YPN_3879 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3879 IPR032781 YPN_3879 YPN_3880 IPR001173 Glycosyltransferase 2-like YPN_3880 IPR029044 Nucleotide-diphospho-sugar transferases YPN_3881 IPR002201 Glycosyl transferase, family 9 YPN_3882 IPR003819 Taurine catabolism dioxygenase TauD/TfdA YPN_3883 IPR000515 MetI-like domain YPN_3883 IPR035906 YPN_3883 YPN_3884 IPR003439 ABC transporter-like YPN_3884 IPR003593 AAA+ ATPase domain YPN_3884 IPR017871 ABC transporter, conserved site YPN_3884 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3885 IPR001638 Extracellular solute-binding protein, family 3 YPN_3885 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPN_3885 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA YPN_3886 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPN_3887 IPR000073 Alpha/beta hydrolase fold-1 YPN_3887 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site YPN_3887 IPR012020 AB-hydrolase YheT, putative YPN_3887 IPR029058 Alpha/Beta hydrolase fold YPN_3888 IPR010648 Uncharacterised protein family UPF0270 YPN_3888 IPR036685 YPN_3888 YPN_3889 IPR006082 Phosphoribulokinase YPN_3889 IPR006083 Phosphoribulokinase/uridine kinase YPN_3889 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3890 IPR010665 Protein of unknown function DUF1240 YPN_3891 IPR003718 OsmC/Ohr family YPN_3891 IPR015946 K homology domain-like, alpha/beta YPN_3891 IPR036102 YPN_3891 YPN_3892 IPR000595 Cyclic nucleotide-binding domain YPN_3892 IPR012318 Helix-turn-helix motif, Crp-type YPN_3892 IPR014710 RmlC-like jelly roll fold YPN_3892 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPN_3892 IPR018488 Cyclic nucleotide-binding, conserved site YPN_3892 IPR018490 Cyclic nucleotide-binding-like YPN_3892 IPR036388 YPN_3892 YPN_3892 IPR036390 YPN_3892 YPN_3893 IPR010020 Integral membrane protein, YccS/YhfK YPN_3893 IPR032692 YPN_3893 YPN_3894 IPR004636 Acetylornithine/Succinylornithine transaminase family YPN_3894 IPR005814 Aminotransferase class-III YPN_3894 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPN_3894 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPN_3894 IPR015424 Pyridoxal phosphate-dependent transferase YPN_3894 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPN_3895 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPN_3895 IPR017926 Glutamine amidotransferase YPN_3895 IPR029062 Class I glutamine amidotransferase-like YPN_3896 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3896 IPR033186 YPN_3896 YPN_3897 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPN_3897 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPN_3897 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPN_3897 IPR029000 Cyclophilin-like domain YPN_3898 IPR001088 Glycoside hydrolase, family 4 YPN_3898 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPN_3898 IPR019802 Glycoside hydrolase, family 4, conserved site YPN_3898 IPR022616 Glycosyl hydrolase, family 4, C-terminal YPN_3898 IPR036291 YPN_3898 YPN_3899 IPR000843 Transcription regulator HTH, LacI YPN_3899 IPR010982 Lambda repressor-like, DNA-binding domain YPN_3899 IPR028082 Periplasmic binding protein-like I YPN_3900 IPR000531 TonB-dependent receptor, beta-barrel YPN_3900 IPR010100 TonB-dependent copper receptor YPN_3900 IPR012910 TonB-dependent receptor, plug YPN_3900 IPR036942 YPN_3900 YPN_3900 IPR037066 YPN_3900 YPN_3901 IPR011701 Major facilitator superfamily YPN_3901 IPR023528 Major facilitator superfamily transporter, TsgA YPN_3901 IPR036259 YPN_3901 YPN_3902 IPR011059 Metal-dependent hydrolase, composite domain YPN_3902 IPR013108 Amidohydrolase 3 YPN_3902 IPR032466 YPN_3902 YPN_3903 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPN_3903 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YPN_3903 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPN_3903 IPR007419 BFD-like [2Fe-2S]-binding domain YPN_3903 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YPN_3903 IPR017121 Nitrite reductase [NAD(P)H], large subunit YPN_3903 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPN_3903 IPR036136 YPN_3903 YPN_3903 IPR036188 YPN_3903 YPN_3904 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD YPN_3904 IPR036922 YPN_3904 YPN_3906 IPR000292 Formate/nitrite transporter YPN_3906 IPR023271 Aquaporin-like YPN_3906 IPR024002 Formate/nitrite transporter, conserved site YPN_3907 IPR000878 Tetrapyrrole methylase YPN_3907 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPN_3907 IPR006366 Uroporphyrin-III C-methyltransferase YPN_3907 IPR006367 Sirohaem synthase, N-terminal YPN_3907 IPR012409 Sirohaem synthase YPN_3907 IPR014776 Tetrapyrrole methylase, subdomain 2 YPN_3907 IPR014777 Tetrapyrrole methylase, subdomain 1 YPN_3907 IPR019478 Sirohaem synthase, dimerisation domain YPN_3907 IPR028281 Siroheme synthase, central domain YPN_3907 IPR035996 YPN_3907 YPN_3907 IPR036291 YPN_3907 YPN_3907 IPR037115 YPN_3907 YPN_3908 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPN_3908 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPN_3908 IPR002306 Tryptophan-tRNA ligase YPN_3908 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPN_3908 IPR024109 Tryptophan-tRNA ligase, bacterial-type YPN_3909 IPR006346 2-phosphoglycolate phosphatase, prokaryotic YPN_3909 IPR006439 HAD hydrolase, subfamily IA YPN_3909 IPR023198 Phosphoglycolate phosphatase, domain 2 YPN_3909 IPR023214 HAD-like domain YPN_3909 IPR036412 YPN_3909 YPN_3909 IPR037512 YPN_3909 YPN_3910 IPR000056 Ribulose-phosphate 3-epimerase-like YPN_3910 IPR011060 Ribulose-phosphate binding barrel YPN_3910 IPR013785 Aldolase-type TIM barrel YPN_3910 IPR026019 Ribulose-phosphate 3-epimerase YPN_3911 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_3911 IPR012263 Adenine modification methylase, M.EcoRV-type YPN_3911 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPN_3911 IPR023095 Adenine-specific methyltransferase, domain 2 YPN_3911 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3912 IPR007730 Sporulation-related domain YPN_3912 IPR032899 YPN_3912 YPN_3912 IPR036680 YPN_3912 YPN_3913 IPR016037 3-dehydroquinate synthase AroB YPN_3913 IPR030960 YPN_3913 YPN_3913 IPR030963 YPN_3913 YPN_3914 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPN_3914 IPR023000 Shikimate kinase, conserved site YPN_3914 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3914 IPR031322 YPN_3914 YPN_3915 IPR001775 GspD/PilQ family YPN_3915 IPR004846 Type II/III secretion system YPN_3915 IPR005644 NolW-like YPN_3915 IPR013355 Type IV pilus secretin PilQ YPN_3915 IPR038591 YPN_3915 YPN_3917 IPR019684 Protein of unknown function DUF2531 YPN_3919 IPR007813 Fimbrial assembly PilN YPN_3920 IPR005883 Type IV pilus assembly protein PilM YPN_3921 IPR001264 Glycosyl transferase, family 51 YPN_3921 IPR001460 Penicillin-binding protein, transpeptidase YPN_3921 IPR012338 Beta-lactamase/transpeptidase-like YPN_3921 IPR023346 Lysozyme-like domain YPN_3921 IPR031376 YPN_3921 YPN_3921 IPR036950 YPN_3921 YPN_3922 IPR000086 NUDIX hydrolase domain YPN_3922 IPR015797 NUDIX hydrolase domain-like YPN_3922 IPR020084 NUDIX hydrolase, conserved site YPN_3923 IPR010771 Intracellular growth attenuator IgaA YPN_3924 IPR006439 HAD hydrolase, subfamily IA YPN_3924 IPR023214 HAD-like domain YPN_3924 IPR036412 YPN_3924 YPN_3925 IPR002942 RNA-binding S4 domain YPN_3925 IPR025708 Heat shock protein 15 YPN_3925 IPR036986 YPN_3925 YPN_3926 IPR000397 Heat shock protein Hsp33 YPN_3926 IPR016153 Heat shock protein Hsp33, N-terminal YPN_3926 IPR016154 Heat shock protein Hsp33, C-terminal YPN_3926 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain YPN_3927 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YPN_3927 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YPN_3927 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YPN_3927 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YPN_3928 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3928 IPR003660 HAMP linker domain YPN_3928 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPN_3928 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPN_3928 IPR036097 YPN_3928 YPN_3928 IPR036890 YPN_3928 YPN_3929 IPR001789 Signal transduction response regulator, receiver domain YPN_3929 IPR001867 Signal transduction response regulator, C-terminal YPN_3929 IPR011006 CheY-like superfamily YPN_3929 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3929 IPR036388 YPN_3929 YPN_3930 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPN_3930 IPR006358 Transcription elongation factor GreB YPN_3930 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPN_3930 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPN_3930 IPR023459 Transcription elongation factor GreA/GreB family YPN_3930 IPR028624 Transcription elongation factor GreA/GreB YPN_3930 IPR036805 YPN_3930 YPN_3930 IPR036953 YPN_3930 YPN_3931 IPR003029 Ribosomal protein S1, RNA-binding domain YPN_3931 IPR006641 YqgF/RNase H-like domain YPN_3931 IPR010994 RuvA domain 2-like YPN_3931 IPR012337 Ribonuclease H-like domain YPN_3931 IPR012340 Nucleic acid-binding, OB-fold YPN_3931 IPR018974 Tex-like protein, N-terminal YPN_3931 IPR022967 RNA-binding domain, S1 YPN_3931 IPR023319 Tex-like protein, HTH domain YPN_3931 IPR023323 Tex-like domain YPN_3931 IPR032639 YPN_3931 YPN_3931 IPR037027 YPN_3931 YPN_3932 IPR007167 Ferrous iron transporter FeoA domain YPN_3932 IPR008988 Transcriptional repressor, C-terminal YPN_3932 IPR038157 YPN_3932 YPN_3933 IPR003373 Ferrous iron transport protein B YPN_3933 IPR005225 Small GTP-binding protein domain YPN_3933 IPR011640 Ferrous iron transport protein B, C-terminal YPN_3933 IPR011642 Nucleoside recognition Gate YPN_3933 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3933 IPR030389 YPN_3933 YPN_3934 IPR015102 Transcriptional regulator HTH-type, FeoC YPN_3934 IPR023732 Ferrous iron transport protein C YPN_3934 IPR036388 YPN_3934 YPN_3934 IPR036390 YPN_3934 YPN_3935 IPR010854 Domain of unknown function DUF1471 YPN_3935 IPR025543 Dodecin-like YPN_3935 IPR036275 YPN_3935 YPN_3936 IPR000073 Alpha/beta hydrolase fold-1 YPN_3936 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase YPN_3936 IPR029058 Alpha/Beta hydrolase fold YPN_3937 IPR000836 Phosphoribosyltransferase domain YPN_3937 IPR029057 Phosphoribosyltransferase-like YPN_3938 IPR000361 FeS cluster biogenesis YPN_3938 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YPN_3938 IPR017726 Fe/S biogenesis protein NfuA YPN_3938 IPR034904 YPN_3938 YPN_3938 IPR035903 YPN_3938 YPN_3939 IPR003385 Glycoside hydrolase, family 77 YPN_3939 IPR017853 Glycoside hydrolase, superfamily YPN_3940 IPR000811 Glycosyl transferase, family 35 YPN_3940 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPN_3940 IPR035090 YPN_3940 YPN_3942 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3943 IPR001270 ClpA/B family YPN_3943 IPR002611 IstB-like ATP-binding protein YPN_3943 IPR003593 AAA+ ATPase domain YPN_3943 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3943 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_3944 IPR001584 Integrase, catalytic core YPN_3944 IPR006120 Resolvase, HTH domain YPN_3944 IPR009057 Homeodomain-like YPN_3944 IPR012337 Ribonuclease H-like domain YPN_3945 IPR000792 Transcription regulator LuxR, C-terminal YPN_3945 IPR011990 Tetratricopeptide-like helical domain YPN_3945 IPR016032 Signal transduction response regulator, C-terminal effector YPN_3945 IPR036388 YPN_3945 YPN_3946 IPR001763 Rhodanese-like domain YPN_3946 IPR023695 Thiosulfate sulfurtransferase, bacterial YPN_3946 IPR036873 YPN_3946 YPN_3947 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YPN_3947 IPR022764 Peptidase S54, rhomboid domain YPN_3947 IPR023662 Rhomboid protease GlpG YPN_3947 IPR035952 YPN_3947 YPN_3947 IPR038236 YPN_3947 YPN_3948 IPR001034 HTH DeoR N-terminal domain YPN_3948 IPR014036 DeoR C-terminal sensor domain YPN_3948 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPN_3948 IPR036388 YPN_3948 YPN_3948 IPR036390 YPN_3948 YPN_3948 IPR037171 YPN_3948 YPN_3949 IPR009057 Homeodomain-like YPN_3949 IPR010921 Trp repressor/replication initiator YPN_3950 IPR001584 Integrase, catalytic core YPN_3950 IPR012337 Ribonuclease H-like domain YPN_3950 IPR025948 HTH-like domain YPN_3950 IPR036397 YPN_3950 YPN_3951 IPR000150 Cof protein YPN_3951 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPN_3951 IPR023214 HAD-like domain YPN_3951 IPR036412 YPN_3951 YPN_3952 IPR000565 DNA topoisomerase, type IIA, subunit B YPN_3952 IPR001241 DNA topoisomerase, type IIA YPN_3952 IPR002288 DNA gyrase B subunit, C-terminal YPN_3952 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPN_3952 IPR006171 Toprim domain YPN_3952 IPR011557 DNA gyrase, subunit B YPN_3952 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPN_3952 IPR013759 DNA topoisomerase, type IIA, central domain YPN_3952 IPR013760 DNA topoisomerase, type IIA-like domain YPN_3952 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_3952 IPR018522 DNA topoisomerase, type IIA, conserved site YPN_3952 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_3952 IPR036890 YPN_3952 YPN_3953 IPR001238 DNA-binding, RecF YPN_3953 IPR003395 RecF/RecN/SMC, N-terminal YPN_3953 IPR018078 DNA-binding, RecF, conserved site YPN_3953 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3954 IPR001001 DNA polymerase III, beta chain YPN_3954 IPR022634 DNA polymerase III, beta chain, N-terminal YPN_3954 IPR022635 DNA polymerase III, beta chain, C-terminal YPN_3954 IPR022637 DNA polymerase III, beta chain, central YPN_3955 IPR001957 Chromosomal replication control, initiator DnaA YPN_3955 IPR003593 AAA+ ATPase domain YPN_3955 IPR010921 Trp repressor/replication initiator YPN_3955 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPN_3955 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YPN_3955 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPN_3955 IPR020591 Chromosomal replication control, initiator DnaA-like YPN_3955 IPR024633 DnaA N-terminal domain YPN_3955 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3955 IPR038454 YPN_3955 YPN_3956 IPR000271 Ribosomal protein L34 YPN_3956 IPR020939 Ribosomal protein L34, conserved site YPN_3957 IPR000100 Ribonuclease P YPN_3957 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPN_3957 IPR020539 Ribonuclease P, conserved site YPN_3957 IPR020568 Ribosomal protein S5 domain 2-type fold YPN_3958 IPR002696 Putative membrane protein insertion efficiency factor YPN_3959 IPR001708 Membrane insertase OXA1/ALB3/YidC YPN_3959 IPR019998 Membrane insertase YidC YPN_3959 IPR028053 Membrane insertase YidC, N-terminal YPN_3959 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPN_3959 IPR038210 YPN_3959 YPN_3959 IPR038221 YPN_3959 YPN_3960 IPR004520 tRNA modification GTPase MnmE YPN_3960 IPR005225 Small GTP-binding protein domain YPN_3960 IPR006073 GTP binding domain YPN_3960 IPR018948 GTP-binding protein TrmE, N-terminal YPN_3960 IPR025867 tRNA modification GTPase MnmE C-terminal domain YPN_3960 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPN_3960 IPR027368 tRNA modification GTPase MnmE domain 2 YPN_3960 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3961 IPR010758 Trans-2-enoyl-CoA reductase YPN_3961 IPR024906 Enoyl reductase FAD binding domain YPN_3961 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YPN_3964 IPR006043 Xanthine/uracil/vitamin C permease YPN_3964 IPR026033 Purine permease PbuG-like YPN_3965 IPR006439 HAD hydrolase, subfamily IA YPN_3965 IPR023198 Phosphoglycolate phosphatase, domain 2 YPN_3965 IPR023214 HAD-like domain YPN_3965 IPR036412 YPN_3965 YPN_3966 IPR000515 MetI-like domain YPN_3966 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_3966 IPR035906 YPN_3966 YPN_3967 IPR000515 MetI-like domain YPN_3967 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPN_3967 IPR035906 YPN_3967 YPN_3968 IPR001638 Extracellular solute-binding protein, family 3 YPN_3968 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPN_3969 IPR007607 Protein of unknown function DUF583 YPN_3970 IPR026022 PhoU domain YPN_3970 IPR028366 Phosphate transport system protein PhoU YPN_3970 IPR038078 YPN_3970 YPN_3971 IPR003439 ABC transporter-like YPN_3971 IPR003593 AAA+ ATPase domain YPN_3971 IPR005670 Phosphate transport system permease protein 1 YPN_3971 IPR017871 ABC transporter, conserved site YPN_3971 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3972 IPR000515 MetI-like domain YPN_3972 IPR005672 Phosphate transport system permease protein PstA YPN_3972 IPR035906 YPN_3972 YPN_3973 IPR000515 MetI-like domain YPN_3973 IPR011864 Phosphate ABC transporter, permease protein PstC YPN_3973 IPR035906 YPN_3973 YPN_3974 IPR005673 ABC transporter, phosphate-binding protein PstS YPN_3974 IPR024370 PBP domain YPN_3975 IPR001347 Sugar isomerase (SIS) YPN_3975 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YPN_3975 IPR029055 Nucleophile aminohydrolases, N-terminal YPN_3976 IPR001451 Bacterial transferase hexapeptide repeat YPN_3976 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YPN_3976 IPR011004 Trimeric LpxA-like YPN_3976 IPR018357 Hexapeptide transferase, conserved site YPN_3976 IPR025877 MobA-like NTP transferase domain YPN_3976 IPR029044 Nucleotide-diphospho-sugar transferases YPN_3977 IPR001469 ATPase, F1 complex, delta/epsilon subunit YPN_3977 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal YPN_3977 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain YPN_3977 IPR036771 YPN_3977 YPN_3977 IPR036794 YPN_3977 YPN_3978 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPN_3978 IPR003593 AAA+ ATPase domain YPN_3978 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPN_3978 IPR005722 ATPase, F1 complex, beta subunit YPN_3978 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPN_3978 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal YPN_3978 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3978 IPR036121 YPN_3978 YPN_3979 IPR000131 ATPase, F1 complex, gamma subunit YPN_3979 IPR023632 ATPase, F1 complex, gamma subunit conserved site YPN_3979 IPR035968 YPN_3979 YPN_3980 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPN_3980 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YPN_3980 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPN_3980 IPR005294 ATPase, F1 complex, alpha subunit YPN_3980 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPN_3980 IPR023366 ATP synthase subunit alpha-like domain YPN_3980 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_3980 IPR036121 YPN_3980 YPN_3980 IPR038376 YPN_3980 YPN_3981 IPR000711 ATPase, OSCP/delta subunit YPN_3981 IPR020781 ATPase, OSCP/delta subunit, conserved site YPN_3981 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YPN_3982 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast YPN_3982 IPR005864 ATPase, F0 complex, subunit B, bacterial YPN_3982 IPR028987 F-type ATP synthase subunit B-like, membrane domain YPN_3983 IPR000454 ATPase, F0 complex, subunit C YPN_3983 IPR002379 V-ATPase proteolipid subunit C-like domain YPN_3983 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast YPN_3983 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site YPN_3983 IPR035921 YPN_3983 YPN_3983 IPR038662 YPN_3983 YPN_3984 IPR000568 ATPase, F0 complex, subunit A YPN_3984 IPR023011 ATPase, F0 complex, subunit A, active site YPN_3984 IPR035908 YPN_3984 YPN_3985 IPR005598 ATP synthase protein I YPN_3986 IPR003682 rRNA small subunit methyltransferase G YPN_3986 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_3987 IPR002218 Glucose-inhibited division protein A-related YPN_3987 IPR004416 Glucose-inhibited division protein A YPN_3987 IPR020595 Glucose-inhibited division protein A-related, conserved site YPN_3987 IPR026904 GidA associated domain 3 YPN_3987 IPR036188 YPN_3987 YPN_MT0001 IPR001584 Integrase, catalytic core YPN_MT0001 IPR006120 Resolvase, HTH domain YPN_MT0001 IPR009057 Homeodomain-like YPN_MT0001 IPR012337 Ribonuclease H-like domain YPN_MT0002 IPR001270 ClpA/B family YPN_MT0002 IPR002611 IstB-like ATP-binding protein YPN_MT0002 IPR003593 AAA+ ATPase domain YPN_MT0002 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0002 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_MT0003 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPN_MT0004 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 YPN_MT0004 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 YPN_MT0004 IPR011083 Phage tail collar domain YPN_MT0004 IPR037053 YPN_MT0004 YPN_MT0005 IPR025484 Domain of unknown function DUF4376 YPN_MT0006 IPR013783 Immunoglobulin-like fold YPN_MT0006 IPR015406 Domain of unknown function DUF1983 YPN_MT0006 IPR021034 Domain of unknown function, DUF3672 YPN_MT0006 IPR032876 YPN_MT0006 YPN_MT0006 IPR036116 YPN_MT0006 YPN_MT0008 IPR000064 Endopeptidase, NLPC/P60 domain YPN_MT0008 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain YPN_MT0008 IPR028090 JAB domain, prokaryotic YPN_MT0008 IPR038765 YPN_MT0008 YPN_MT0009 IPR006487 Bacteriophage lambda, GpL, minor tail YPN_MT0010 IPR010265 Bacteriophage lambda, GpM, minor tail YPN_MT0011 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YPN_MT0011 IPR013491 Caudovirus, tape measure, N-terminal YPN_MT0014 IPR003343 Bacterial Ig-like, group 2 YPN_MT0014 IPR008964 Invasin/intimin cell-adhesion YPN_MT0020 IPR003343 Bacterial Ig-like, group 2 YPN_MT0020 IPR008964 Invasin/intimin cell-adhesion YPN_MT0025 IPR004921 Terminase, large subunit YPN_MT0025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0028 IPR016181 Acyl-CoA N-acyltransferase YPN_MT0030 IPR003439 ABC transporter-like YPN_MT0030 IPR003593 AAA+ ATPase domain YPN_MT0030 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPN_MT0030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0031 IPR003115 ParB/Sulfiredoxin YPN_MT0031 IPR036086 YPN_MT0031 YPN_MT0032 IPR003115 ParB/Sulfiredoxin YPN_MT0032 IPR036086 YPN_MT0032 YPN_MT0033 IPR001650 Helicase, C-terminal YPN_MT0033 IPR011545 DEAD/DEAH box helicase domain YPN_MT0033 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPN_MT0033 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0036 IPR003223 Flagellin phase1 repressor YPN_MT0040 IPR002686 Transposase IS200-like YPN_MT0040 IPR036515 YPN_MT0040 YPN_MT0041 IPR012337 Ribonuclease H-like domain YPN_MT0041 IPR036397 YPN_MT0041 YPN_MT0042 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0042 IPR038729 YPN_MT0042 YPN_MT0043 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPN_MT0043 IPR029052 Metallo-dependent phosphatase-like YPN_MT0044 IPR001638 Extracellular solute-binding protein, family 3 YPN_MT0044 IPR015168 SsuA/THI5-like YPN_MT0046 IPR000525 Initiator Rep protein YPN_MT0050 IPR019701 Bacteriophage P22, NinX YPN_MT0051 IPR001107 Band 7 protein YPN_MT0052 IPR013765 DNA recombination and repair protein RecA YPN_MT0052 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0054 IPR002421 5'-3' exonuclease, N-terminal YPN_MT0054 IPR008918 Helix-hairpin-helix motif, class 2 YPN_MT0054 IPR020045 5'-3' exonuclease, C-terminal domain YPN_MT0054 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPN_MT0054 IPR029060 PIN domain-like YPN_MT0054 IPR036279 YPN_MT0054 YPN_MT0059 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPN_MT0059 IPR004013 PHP, C-terminal YPN_MT0059 IPR004805 DNA polymerase III, alpha subunit YPN_MT0059 IPR011708 Bacterial DNA polymerase III, alpha subunit YPN_MT0059 IPR029460 DNA polymerase, helix-hairpin-helix motif YPN_MT0059 IPR036895 YPN_MT0059 YPN_MT0060 IPR011704 ATPase, dynein-related, AAA domain YPN_MT0060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0061 IPR006538 Cobalt chelatase, CobT subunit YPN_MT0061 IPR025861 Cobalamin biosynthesis protein CobT VWA domain YPN_MT0061 IPR036465 YPN_MT0061 YPN_MT0063 IPR002104 Integrase, catalytic YPN_MT0063 IPR010998 Integrase, Lambda-type, N-terminal YPN_MT0063 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPN_MT0063 IPR013762 Integrase-like, catalytic core YPN_MT0065 IPR000015 Outer membrane usher protein YPN_MT0065 IPR018030 Fimbrial membrane usher, conserved site YPN_MT0065 IPR025885 PapC, N-terminal domain YPN_MT0065 IPR025949 PapC-like, C-terminal domain YPN_MT0065 IPR037224 YPN_MT0065 YPN_MT0066 IPR001829 Pili assembly chaperone, bacterial YPN_MT0066 IPR008962 PapD-like YPN_MT0066 IPR013783 Immunoglobulin-like fold YPN_MT0066 IPR016147 PapD, N-terminal, bacterial YPN_MT0066 IPR016148 Pili assembly chaperone, C-terminal domain YPN_MT0066 IPR018046 Pili assembly chaperone, conserved site YPN_MT0066 IPR036316 YPN_MT0066 YPN_MT0069 IPR012310 DNA ligase, ATP-dependent, central YPN_MT0069 IPR012340 Nucleic acid-binding, OB-fold YPN_MT0069 IPR016306 DNA ligase, ATP-dependent, bacteriophage T3-type YPN_MT0070 IPR001270 ClpA/B family YPN_MT0070 IPR002611 IstB-like ATP-binding protein YPN_MT0070 IPR003593 AAA+ ATPase domain YPN_MT0070 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0070 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_MT0071 IPR001584 Integrase, catalytic core YPN_MT0071 IPR006120 Resolvase, HTH domain YPN_MT0071 IPR009057 Homeodomain-like YPN_MT0071 IPR012337 Ribonuclease H-like domain YPN_MT0075 IPR001207 Transposase, mutator type YPN_MT0076 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPN_MT0076 IPR003346 Transposase, IS116/IS110/IS902 YPN_MT0078 IPR000477 Reverse transcriptase domain YPN_MT0079 IPR001736 Phospholipase D/Transphosphatidylase YPN_MT0080 IPR025202 Phospholipase D-like domain YPN_MT0082 IPR006842 Transposase (putative), YhgA-like YPN_MT0082 IPR010106 Conserved hypothetical protein CHP01784 YPN_MT0083 IPR006118 Recombinase, conserved site YPN_MT0083 IPR006119 Resolvase, N-terminal YPN_MT0083 IPR036162 YPN_MT0083 YPN_MT0084 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YPN_MT0084 IPR036165 YPN_MT0084 YPN_MT0085 IPR025669 AAA domain YPN_MT0085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0086 IPR003115 ParB/Sulfiredoxin YPN_MT0086 IPR004437 ParB/RepB/Spo0J partition protein family YPN_MT0086 IPR014884 ParB protein family, C-terminal YPN_MT0087 IPR003593 AAA+ ATPase domain YPN_MT0087 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_MT0088 IPR001091 Restriction/modification DNA-methylase YPN_MT0088 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPN_MT0088 IPR002941 DNA methylase N-4/N-6 YPN_MT0088 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPN_MT0090 IPR009811 Protein of unknown function DUF1380 YPN_MT0092 IPR009899 Antirestriction YPN_MT0093 IPR009253 Protein of unknown function DUF905 YPN_MT0093 IPR038612 YPN_MT0093 YPN_MT0094 IPR003115 ParB/Sulfiredoxin YPN_MT0094 IPR036086 YPN_MT0094 YPN_MT0096 IPR003343 Bacterial Ig-like, group 2 YPN_MT0096 IPR008964 Invasin/intimin cell-adhesion YPN_MT0100 IPR008966 Adhesion domain YPN_MT0100 IPR015335 Capsule antigen, Caf1 YPN_MT0100 IPR038699 YPN_MT0100 YPN_MT0101 IPR009057 Homeodomain-like YPN_MT0101 IPR011256 Regulatory factor, effector binding domain YPN_MT0101 IPR018060 DNA binding HTH domain, AraC-type YPN_MT0101 IPR018062 HTH domain AraC-type, conserved site YPN_MT0101 IPR020449 Transcription regulator HTH, AraC- type YPN_MT0101 IPR029442 GyrI-like small molecule binding domain YPN_MT0102 IPR025285 Domain of unknown function DUF4145 YPN_MT0103 IPR025188 Domain of unknown function DUF4113 YPN_PCP0001 IPR001584 Integrase, catalytic core YPN_PCP0001 IPR006120 Resolvase, HTH domain YPN_PCP0001 IPR009057 Homeodomain-like YPN_PCP0001 IPR012337 Ribonuclease H-like domain YPN_PCP0002 IPR001270 ClpA/B family YPN_PCP0002 IPR002611 IstB-like ATP-binding protein YPN_PCP0002 IPR003593 AAA+ ATPase domain YPN_PCP0002 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPN_PCP0002 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPN_PCP0003 IPR023346 Lysozyme-like domain YPN_PCP0003 IPR031922 YPN_PCP0003 YPN_PCP0005 IPR000036 Peptidase A26, omptin YPN_PCP0005 IPR020079 Peptidase A26, omptin, conserved site YPN_PCP0005 IPR020080 Outer membrane adhesin/peptidase omptin YPN_PCP0006 IPR001387 Cro/C1-type helix-turn-helix domain YPN_PCP0006 IPR010982 Lambda repressor-like, DNA-binding domain YPN_PCP0006 IPR039554 YPN_PCP0006 YPN_PCP0007 IPR009241 Addiction module killer protein YPN_PCP0008 IPR000769 Regulatory protein Rop YPN_PCP0008 IPR035962 YPN_PCP0008 YPN_PCP0009 IPR000769 Regulatory protein Rop YPN_PCP0009 IPR035962 YPN_PCP0009