CH63_1003 SM00479 CH63_1003 CH63_1006 SM00849 Metallo-beta-lactamase superfamily CH63_1007 SM00257 Lysin motif CH63_1017 SM00382 ATPases associated with a variety of cellular activities CH63_1017 SM00930 CH63_1017 CH63_1025 SM01322 CH63_1025 CH63_1029 SM00977 TilS substrate C-terminal domain CH63_103 SM00870 CH63_103 CH63_1032 SM00481 DNA polymerase alpha chain like domain CH63_1038 SM00935 Outer membrane protein (OmpH-like) CH63_1040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH63_1049 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH63_1051 SM01321 CH63_1051 CH63_1056 SM01321 CH63_1056 CH63_1060 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH63_1060 SM00475 5'-3' exonuclease CH63_1068 SM00925 MltA specific insert domain CH63_107 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH63_107 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH63_107 SM00493 CH63_107 CH63_1071 SM00646 CH63_1071 CH63_1085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH63_1087 SM00927 DNA mismatch repair enzyme MutH CH63_1096 SM00354 helix_turn _helix lactose operon repressor CH63_1100 SM00849 Metallo-beta-lactamase superfamily CH63_1105 SM00862 Transcriptional regulatory protein, C terminal CH63_1117 SM00382 ATPases associated with a variety of cellular activities CH63_1121 SM00947 Carbonic anhydrase CH63_1124 SM00869 Autotransporter beta-domain CH63_1126 SM00382 ATPases associated with a variety of cellular activities CH63_1130 SM00420 helix_turn_helix, Deoxyribose operon repressor CH63_1130 SM01134 CH63_1130 CH63_1147 SM00354 helix_turn _helix lactose operon repressor CH63_1150 SM00354 helix_turn _helix lactose operon repressor CH63_1158 SM00382 ATPases associated with a variety of cellular activities CH63_1159 SM00382 ATPases associated with a variety of cellular activities CH63_117 SM00448 cheY-homologous receiver domain CH63_118 SM00984 UDP binding domain CH63_1180 SM00778 Zinc-binding domain of primase-helicase CH63_1180 SM00885 D5 N terminal like CH63_1181 SM00530 Helix-turn-helix XRE-family like proteins CH63_1183 SM00530 Helix-turn-helix XRE-family like proteins CH63_1189 SM00937 CH63_1189 CH63_119 SM00528 Domain in histone-like proteins of HNS family CH63_1195 SM00387 Histidine kinase-like ATPases CH63_1195 SM00388 His Kinase A (phosphoacceptor) domain CH63_1196 SM00448 cheY-homologous receiver domain CH63_1196 SM00862 Transcriptional regulatory protein, C terminal CH63_121 SM00382 ATPases associated with a variety of cellular activities CH63_1210 SM01011 Aminopeptidase P, N-terminal domain CH63_1222 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH63_1223 SM01321 CH63_1223 CH63_1224 SM00861 Transketolase, pyrimidine binding domain CH63_123 SM01022 CH63_123 CH63_1230 SM00731 SprT homologues. CH63_1235 SM00732 Likely ribonuclease with RNase H fold. CH63_1238 SM00382 ATPases associated with a variety of cellular activities CH63_1242 SM01152 CH63_1242 CH63_1244 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_125 SM00972 Spore Coat Protein U domain CH63_1251 SM00478 endonuclease III CH63_1251 SM00525 CH63_1251 CH63_1257 SM00382 ATPases associated with a variety of cellular activities CH63_1271 SM00382 ATPases associated with a variety of cellular activities CH63_1271 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_128 SM00972 Spore Coat Protein U domain CH63_1285 SM00421 helix_turn_helix, Lux Regulon CH63_129 SM00972 Spore Coat Protein U domain CH63_1292 SM01006 Siderophore biosynthesis protein domain CH63_130 SM00972 Spore Coat Protein U domain CH63_1300 SM00354 helix_turn _helix lactose operon repressor CH63_1307 SM00869 Autotransporter beta-domain CH63_1308 SM00869 Autotransporter beta-domain CH63_1315 SM00382 ATPases associated with a variety of cellular activities CH63_1316 SM00382 ATPases associated with a variety of cellular activities CH63_1327 SM00382 ATPases associated with a variety of cellular activities CH63_1334 SM00421 helix_turn_helix, Lux Regulon CH63_1334 SM00448 cheY-homologous receiver domain CH63_1335 SM00387 Histidine kinase-like ATPases CH63_1335 SM00388 His Kinase A (phosphoacceptor) domain CH63_1335 SM00448 cheY-homologous receiver domain CH63_1339 SM00342 helix_turn_helix, arabinose operon control protein CH63_1347 SM00382 ATPases associated with a variety of cellular activities CH63_135 SM00945 ProQ/FINO family CH63_136 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH63_136 SM00245 tail specific protease CH63_1360 SM00382 ATPases associated with a variety of cellular activities CH63_1367 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_1386 SM00060 Fibronectin type 3 domain CH63_1387 SM00869 Autotransporter beta-domain CH63_1390 SM00563 Phosphate acyltransferases CH63_1396 SM00829 Enoylreductase CH63_1397 SM00382 ATPases associated with a variety of cellular activities CH63_1398 SM01005 Alanine racemase, C-terminal domain CH63_1405 SM01007 Class II Aldolase and Adducin N-terminal domain CH63_1410 SM00342 helix_turn_helix, arabinose operon control protein CH63_1411 SM00342 helix_turn_helix, arabinose operon control protein CH63_1415 SM01276 CH63_1415 CH63_1420 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH63_1427 SM00883 Chaperonin 10 Kd subunit CH63_1431 SM00841 Elongation factor P, C-terminal CH63_1431 SM01185 CH63_1431 CH63_1441 SM00479 CH63_1441 CH63_1448 SM00257 Lysin motif CH63_1448 SM00646 CH63_1448 CH63_1449 SM00853 MutL C terminal dimerisation domain CH63_1449 SM01340 CH63_1449 CH63_1453 SM00244 prohibitin homologues CH63_1454 SM00244 prohibitin homologues CH63_1456 SM00788 Adenylosuccinate synthetase CH63_1458 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_1458 SM00357 Cold shock protein domain CH63_1458 SM00955 CH63_1458 CH63_1459 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH63_146 SM00346 helix_turn_helix isocitrate lyase regulation CH63_1462 SM00382 ATPases associated with a variety of cellular activities CH63_147 SM00644 CH63_147 CH63_1470 SM01321 CH63_1470 CH63_1479 SM00116 Domain in cystathionine beta-synthase and other proteins. CH63_1479 SM01091 Transporter associated domain CH63_1498 SM00387 Histidine kinase-like ATPases CH63_1498 SM00388 His Kinase A (phosphoacceptor) domain CH63_1499 SM00448 cheY-homologous receiver domain CH63_1499 SM00862 Transcriptional regulatory protein, C terminal CH63_1502 SM01103 CH63_1502 CH63_1504 SM00382 ATPases associated with a variety of cellular activities CH63_1511 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_1511 SM00322 K homology RNA-binding domain CH63_1515 SM01387 CH63_1515 CH63_1518 SM00052 Putative diguanylate phosphodiesterase CH63_1518 SM00091 PAS domain CH63_1518 SM00267 diguanylate cyclase CH63_152 SM00382 ATPases associated with a variety of cellular activities CH63_1524 SM00869 Autotransporter beta-domain CH63_1525 SM00364 Leucine-rich repeats, bacterial type CH63_1526 SM00364 Leucine-rich repeats, bacterial type CH63_1527 SM00364 Leucine-rich repeats, bacterial type CH63_1527 SM00369 Leucine-rich repeats, typical (most populated) subfamily CH63_1531 SM00823 Phosphopantetheine attachment site CH63_1531 SM00825 Beta-ketoacyl synthase CH63_1533 SM00382 ATPases associated with a variety of cellular activities CH63_1543 SM00798 AICARFT/IMPCHase bienzyme CH63_1543 SM00851 MGS-like domain CH63_1544 SM01209 CH63_1544 CH63_1544 SM01210 CH63_1544 CH63_1546 SM00411 bacterial (prokaryotic) histone like domain CH63_1558 SM00876 Biotin and Thiamin Synthesis associated domain CH63_1559 SM01321 CH63_1559 CH63_1560 SM00663 RNA polymerase I subunit A N-terminus CH63_1566 SM00649 Ribosomal protein L11/L12 CH63_1567 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH63_1567 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH63_1574 SM00382 ATPases associated with a variety of cellular activities CH63_1588 SM01321 CH63_1588 CH63_1595 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH63_1595 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH63_1596 SM01004 Delta-aminolevulinic acid dehydratase CH63_1598 SM00382 ATPases associated with a variety of cellular activities CH63_1618 SM00382 ATPases associated with a variety of cellular activities CH63_1629 SM00382 ATPases associated with a variety of cellular activities CH63_1630 SM00382 ATPases associated with a variety of cellular activities CH63_1635 SM01321 CH63_1635 CH63_1638 SM00382 ATPases associated with a variety of cellular activities CH63_1639 SM00382 ATPases associated with a variety of cellular activities CH63_1639 SM00962 SRP54-type protein, GTPase domain CH63_1639 SM00963 SRP54-type protein, helical bundle domain CH63_165 SM00382 ATPases associated with a variety of cellular activities CH63_1659 SM00341 Helicase and RNase D C-terminal CH63_1659 SM00487 DEAD-like helicases superfamily CH63_1659 SM00490 helicase superfamily c-terminal domain CH63_1659 SM00956 CH63_1659 CH63_1673 SM01219 CH63_1673 CH63_1679 SM01321 CH63_1679 CH63_1694 SM00984 UDP binding domain CH63_1698 SM00357 Cold shock protein domain CH63_1698 SM00382 ATPases associated with a variety of cellular activities CH63_1698 SM00959 Rho termination factor, N-terminal domain CH63_17 SM00487 DEAD-like helicases superfamily CH63_17 SM00491 CH63_17 CH63_1700 SM00487 DEAD-like helicases superfamily CH63_1700 SM00490 helicase superfamily c-terminal domain CH63_171 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH63_1713 SM00507 HNH nucleases CH63_1730 SM00382 ATPases associated with a variety of cellular activities CH63_1735 SM00382 ATPases associated with a variety of cellular activities CH63_1754 SM00382 ATPases associated with a variety of cellular activities CH63_176 SM00873 B3/4 domain CH63_176 SM00874 tRNA synthetase B5 domain CH63_176 SM00896 Ferredoxin-fold anticodon binding domain CH63_1761 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH63_177 SM00411 bacterial (prokaryotic) histone like domain CH63_1773 SM00487 DEAD-like helicases superfamily CH63_1773 SM00490 helicase superfamily c-terminal domain CH63_1775 SM00354 helix_turn _helix lactose operon repressor CH63_1778 SM00382 ATPases associated with a variety of cellular activities CH63_1778 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_1784 SM00382 ATPases associated with a variety of cellular activities CH63_1785 SM01321 CH63_1785 CH63_1806 SM00448 cheY-homologous receiver domain CH63_1806 SM00862 Transcriptional regulatory protein, C terminal CH63_1807 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_1807 SM00387 Histidine kinase-like ATPases CH63_1807 SM00388 His Kinase A (phosphoacceptor) domain CH63_1808 SM00342 helix_turn_helix, arabinose operon control protein CH63_181 SM00382 ATPases associated with a variety of cellular activities CH63_1810 SM00971 Serine acetyltransferase, N-terminal CH63_1814 SM00450 Rhodanese Homology Domain CH63_1819 SM00829 Enoylreductase CH63_1827 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CH63_1827 SM01232 CH63_1827 CH63_1838 SM00532 Ligase N family CH63_1839 SM00072 Guanylate kinase homologues. CH63_1840 SM01409 CH63_1840 CH63_1841 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH63_1841 SM00954 Region found in RelA / SpoT proteins CH63_1843 SM00487 DEAD-like helicases superfamily CH63_1843 SM00490 helicase superfamily c-terminal domain CH63_1863 SM00422 helix_turn_helix, mercury resistance CH63_1865 SM00662 RNA polymerases D CH63_1866 SM00363 S4 RNA-binding domain CH63_1866 SM01390 CH63_1866 CH63_1879 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH63_1880 SM01374 CH63_1880 CH63_1884 SM00322 K homology RNA-binding domain CH63_1887 SM01382 CH63_1887 CH63_1887 SM01383 CH63_1887 CH63_1891 SM01403 CH63_1891 CH63_1894 SM01321 CH63_1894 CH63_1896 SM00838 Elongation factor G C-terminus CH63_1896 SM00889 Elongation factor G, domain IV CH63_1910 SM00382 ATPases associated with a variety of cellular activities CH63_1915 SM00382 ATPases associated with a variety of cellular activities CH63_1916 SM00062 Bacterial periplasmic substrate-binding proteins CH63_1923 SM00100 Cyclic nucleotide-monophosphate binding domain CH63_1923 SM00419 helix_turn_helix, cAMP Regulatory protein CH63_1930 SM00354 helix_turn _helix lactose operon repressor CH63_1955 SM00363 S4 RNA-binding domain CH63_1958 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_1958 SM00387 Histidine kinase-like ATPases CH63_1958 SM00388 His Kinase A (phosphoacceptor) domain CH63_1959 SM00448 cheY-homologous receiver domain CH63_1959 SM00862 Transcriptional regulatory protein, C terminal CH63_1961 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_1961 SM00732 Likely ribonuclease with RNase H fold. CH63_1962 SM00899 CH63_1962 CH63_1972 SM00421 helix_turn_helix, Lux Regulon CH63_1973 SM00450 Rhodanese Homology Domain CH63_1975 SM00420 helix_turn_helix, Deoxyribose operon repressor CH63_1975 SM01134 CH63_1975 CH63_1979 SM00382 ATPases associated with a variety of cellular activities CH63_1989 SM00382 ATPases associated with a variety of cellular activities CH63_1999 SM00912 haemagglutination activity domain CH63_2 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH63_2000 SM01018 B12 binding domain CH63_2001 SM00346 helix_turn_helix isocitrate lyase regulation CH63_201 SM00382 ATPases associated with a variety of cellular activities CH63_2015 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_2015 SM00895 CH63_2015 CH63_2021 SM00382 ATPases associated with a variety of cellular activities CH63_2022 SM00327 von Willebrand factor (vWF) type A domain CH63_2024 SM00344 helix_turn_helix ASNC type CH63_2026 SM01228 CH63_2026 CH63_2035 SM00382 ATPases associated with a variety of cellular activities CH63_2042 SM00382 ATPases associated with a variety of cellular activities CH63_2045 SM00062 Bacterial periplasmic substrate-binding proteins CH63_2055 SM01234 CH63_2055 CH63_2059 SM00382 ATPases associated with a variety of cellular activities CH63_2059 SM00760 Bacterial dnaA protein helix-turn-helix domain CH63_206 SM00382 ATPases associated with a variety of cellular activities CH63_2060 SM00480 DNA polymerase III beta subunit CH63_2062 SM00387 Histidine kinase-like ATPases CH63_2062 SM00433 TopoisomeraseII CH63_2077 SM00642 Alpha-amylase domain CH63_2095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH63_2095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_2095 SM01358 CH63_2095 CH63_2098 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH63_21 SM00341 Helicase and RNase D C-terminal CH63_21 SM00474 3'-5' exonuclease CH63_2123 SM00382 ATPases associated with a variety of cellular activities CH63_2125 SM00342 helix_turn_helix, arabinose operon control protein CH63_2132 SM00530 Helix-turn-helix XRE-family like proteins CH63_2134 SM00382 ATPases associated with a variety of cellular activities CH63_2148 SM00421 helix_turn_helix, Lux Regulon CH63_2148 SM00448 cheY-homologous receiver domain CH63_2149 SM00387 Histidine kinase-like ATPases CH63_2152 SM01321 CH63_2152 CH63_2153 SM00912 haemagglutination activity domain CH63_2159 SM00382 ATPases associated with a variety of cellular activities CH63_2160 SM00382 ATPases associated with a variety of cellular activities CH63_2162 SM00052 Putative diguanylate phosphodiesterase CH63_2162 SM00267 diguanylate cyclase CH63_2170 SM00052 Putative diguanylate phosphodiesterase CH63_2175 SM00869 Autotransporter beta-domain CH63_2186 SM00235 Zinc-dependent metalloprotease CH63_2187 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH63_2190 SM01321 CH63_2190 CH63_2193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_2193 SM00387 Histidine kinase-like ATPases CH63_2193 SM00388 His Kinase A (phosphoacceptor) domain CH63_2193 SM00448 cheY-homologous receiver domain CH63_2194 SM00382 ATPases associated with a variety of cellular activities CH63_2200 SM00448 cheY-homologous receiver domain CH63_2200 SM00862 Transcriptional regulatory protein, C terminal CH63_2203 SM00354 helix_turn _helix lactose operon repressor CH63_2210 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH63_2215 SM00257 Lysin motif CH63_2215 SM00634 Bacterial Ig-like domain (group 1) CH63_2216 SM00634 Bacterial Ig-like domain (group 1) CH63_2218 SM00642 Alpha-amylase domain CH63_2219 SM00642 Alpha-amylase domain CH63_2234 SM00382 ATPases associated with a variety of cellular activities CH63_2234 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_224 SM00479 CH63_224 CH63_2247 SM00342 helix_turn_helix, arabinose operon control protein CH63_2250 SM01133 CH63_2250 CH63_2252 SM00062 Bacterial periplasmic substrate-binding proteins CH63_2255 SM00382 ATPases associated with a variety of cellular activities CH63_2262 SM00382 ATPases associated with a variety of cellular activities CH63_2270 SM01321 CH63_2270 CH63_2271 SM00357 Cold shock protein domain CH63_2272 SM00357 Cold shock protein domain CH63_2274 SM00849 Metallo-beta-lactamase superfamily CH63_2278 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_2278 SM00895 CH63_2278 CH63_2286 SM00878 Biotin carboxylase C-terminal domain CH63_2291 SM00829 Enoylreductase CH63_2292 SM00052 Putative diguanylate phosphodiesterase CH63_2292 SM00267 diguanylate cyclase CH63_2297 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_230 SM00347 helix_turn_helix multiple antibiotic resistance protein CH63_2323 SM00642 Alpha-amylase domain CH63_2325 SM00354 helix_turn _helix lactose operon repressor CH63_2335 SM00382 ATPases associated with a variety of cellular activities CH63_2339 SM00116 Domain in cystathionine beta-synthase and other proteins. CH63_2341 SM00382 ATPases associated with a variety of cellular activities CH63_2348 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH63_2349 SM01321 CH63_2349 CH63_235 SM00363 S4 RNA-binding domain CH63_2350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH63_2361 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_2362 SM00073 Histidine Phosphotransfer domain CH63_2362 SM00091 PAS domain CH63_2362 SM00387 Histidine kinase-like ATPases CH63_2362 SM00388 His Kinase A (phosphoacceptor) domain CH63_2362 SM00448 cheY-homologous receiver domain CH63_2365 SM00749 bacterial OsmY and nodulation domain CH63_2387 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH63_2387 SM00474 3'-5' exonuclease CH63_2387 SM00475 5'-3' exonuclease CH63_2387 SM00482 DNA polymerase A domain CH63_2388 SM01321 CH63_2388 CH63_2389 SM01321 CH63_2389 CH63_2392 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_2393 SM00382 ATPases associated with a variety of cellular activities CH63_2393 SM00448 cheY-homologous receiver domain CH63_2394 SM00091 PAS domain CH63_2394 SM00387 Histidine kinase-like ATPases CH63_2394 SM00388 His Kinase A (phosphoacceptor) domain CH63_2395 SM01230 CH63_2395 CH63_2400 SM00382 ATPases associated with a variety of cellular activities CH63_2402 SM00382 ATPases associated with a variety of cellular activities CH63_2417 SM00342 helix_turn_helix, arabinose operon control protein CH63_2423 SM01133 CH63_2423 CH63_2428 SM00382 ATPases associated with a variety of cellular activities CH63_243 SM00382 ATPases associated with a variety of cellular activities CH63_2439 SM00267 diguanylate cyclase CH63_244 SM00382 ATPases associated with a variety of cellular activities CH63_2446 SM00749 bacterial OsmY and nodulation domain CH63_2452 SM01133 CH63_2452 CH63_2454 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CH63_2459 SM00382 ATPases associated with a variety of cellular activities CH63_2460 SM00530 Helix-turn-helix XRE-family like proteins CH63_2462 SM00382 ATPases associated with a variety of cellular activities CH63_2465 SM00267 diguanylate cyclase CH63_2467 SM00831 Cation transporter/ATPase, N-terminus CH63_2471 SM00342 helix_turn_helix, arabinose operon control protein CH63_2471 SM00871 Bacterial transcription activator, effector binding domain CH63_2472 SM00855 Phosphoglycerate mutase family CH63_2475 SM00448 cheY-homologous receiver domain CH63_2475 SM00862 Transcriptional regulatory protein, C terminal CH63_248 SM01321 CH63_248 CH63_2484 SM00852 Probable molybdopterin binding domain CH63_2489 SM00271 DnaJ molecular chaperone homology domain CH63_249 SM00382 ATPases associated with a variety of cellular activities CH63_2493 SM00904 Riboflavin kinase CH63_2498 SM01321 CH63_2498 CH63_2500 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CH63_2501 SM00851 MGS-like domain CH63_2501 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH63_2506 SM01321 CH63_2506 CH63_2508 SM00858 CH63_2508 CH63_2512 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_2512 SM00895 CH63_2512 CH63_2523 SM00382 ATPases associated with a variety of cellular activities CH63_2525 SM00957 SecA DEAD-like domain CH63_2525 SM00958 SecA preprotein cross-linking domain CH63_2529 SM00864 Tubulin/FtsZ family, GTPase domain CH63_2529 SM00865 Tubulin/FtsZ family, C-terminal domain CH63_2530 SM00842 Cell division protein FtsA CH63_2545 SM00354 helix_turn _helix lactose operon repressor CH63_2546 SM01321 CH63_2546 CH63_2552 SM01321 CH63_2552 CH63_2553 SM00917 LeuA allosteric (dimerisation) domain CH63_2554 SM01329 CH63_2554 CH63_256 SM00953 CH63_256 CH63_2562 SM00382 ATPases associated with a variety of cellular activities CH63_2564 SM00486 DNA polymerase type-B family CH63_2565 SM00487 DEAD-like helicases superfamily CH63_2565 SM00490 helicase superfamily c-terminal domain CH63_2577 SM00382 ATPases associated with a variety of cellular activities CH63_2577 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_258 SM00091 PAS domain CH63_258 SM00382 ATPases associated with a variety of cellular activities CH63_2587 SM00271 DnaJ molecular chaperone homology domain CH63_259 SM01321 CH63_259 CH63_2591 SM00650 Ribosomal RNA adenine dimethylases CH63_2595 SM01321 CH63_2595 CH63_2600 SM00869 Autotransporter beta-domain CH63_2604 SM00220 Serine/Threonine protein kinases, catalytic domain CH63_2606 SM00327 von Willebrand factor (vWF) type A domain CH63_2607 SM00327 von Willebrand factor (vWF) type A domain CH63_2609 SM00327 von Willebrand factor (vWF) type A domain CH63_261 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH63_2611 SM00912 haemagglutination activity domain CH63_2617 SM00869 Autotransporter beta-domain CH63_2620 SM00382 ATPases associated with a variety of cellular activities CH63_2622 SM00354 helix_turn _helix lactose operon repressor CH63_2627 SM01217 CH63_2627 CH63_265 SM00422 helix_turn_helix, mercury resistance CH63_2654 SM00400 zinc finger CH63_2654 SM00493 CH63_2654 CH63_2654 SM00766 DNA primase DnaG DnaB-binding CH63_2657 SM01207 CH63_2657 CH63_2658 SM00905 Dihydroneopterin aldolase CH63_2660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH63_2661 SM00287 Bacterial SH3 domain homologues CH63_2662 SM01118 CH63_2662 CH63_2678 SM00387 Histidine kinase-like ATPases CH63_2678 SM00433 TopoisomeraseII CH63_2681 SM00434 DNA Topoisomerase IV CH63_2682 SM00563 Phosphate acyltransferases CH63_2688 SM00342 helix_turn_helix, arabinose operon control protein CH63_269 SM00890 Domain of unknown function CH63_2707 SM01321 CH63_2707 CH63_2721 SM00382 ATPases associated with a variety of cellular activities CH63_2726 SM00382 ATPases associated with a variety of cellular activities CH63_2730 SM00858 CH63_2730 CH63_2744 SM00862 Transcriptional regulatory protein, C terminal CH63_2748 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_2748 SM00322 K homology RNA-binding domain CH63_2749 SM00028 Tetratricopeptide repeats CH63_2750 SM00487 DEAD-like helicases superfamily CH63_2750 SM00490 helicase superfamily c-terminal domain CH63_2752 SM00530 Helix-turn-helix XRE-family like proteins CH63_2769 SM00382 ATPases associated with a variety of cellular activities CH63_2772 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH63_2773 SM00849 Metallo-beta-lactamase superfamily CH63_2774 SM00072 Guanylate kinase homologues. CH63_2776 SM00382 ATPases associated with a variety of cellular activities CH63_2777 SM00382 ATPases associated with a variety of cellular activities CH63_2783 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_2783 SM00866 CH63_2783 CH63_2787 SM00382 ATPases associated with a variety of cellular activities CH63_2788 SM00382 ATPases associated with a variety of cellular activities CH63_2805 SM00382 ATPases associated with a variety of cellular activities CH63_2807 SM01321 CH63_2807 CH63_281 SM00382 ATPases associated with a variety of cellular activities CH63_281 SM00487 DEAD-like helicases superfamily CH63_281 SM00490 helicase superfamily c-terminal domain CH63_281 SM00847 Helicase associated domain (HA2) Add an annotation CH63_2811 SM01240 CH63_2811 CH63_2816 SM00644 CH63_2816 CH63_2820 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_2820 SM00895 CH63_2820 CH63_2824 SM01321 CH63_2824 CH63_283 SM00530 Helix-turn-helix XRE-family like proteins CH63_2833 SM00947 Carbonic anhydrase CH63_2834 SM00382 ATPases associated with a variety of cellular activities CH63_284 SM00020 Trypsin-like serine protease CH63_2847 SM00487 DEAD-like helicases superfamily CH63_2847 SM00490 helicase superfamily c-terminal domain CH63_2847 SM00847 Helicase associated domain (HA2) Add an annotation CH63_2849 SM00382 ATPases associated with a variety of cellular activities CH63_2858 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH63_2859 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH63_2860 SM00073 Histidine Phosphotransfer domain CH63_2860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_2860 SM00387 Histidine kinase-like ATPases CH63_2860 SM00388 His Kinase A (phosphoacceptor) domain CH63_2860 SM00448 cheY-homologous receiver domain CH63_2861 SM00954 Region found in RelA / SpoT proteins CH63_2864 SM01192 CH63_2864 CH63_2864 SM01193 CH63_2864 CH63_2886 SM00257 Lysin motif CH63_2888 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CH63_2888 SM00534 ATPase domain of DNA mismatch repair MUTS family CH63_289 SM01321 CH63_289 CH63_2890 SM00829 Enoylreductase CH63_2893 SM01120 CH63_2893 CH63_2896 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH63_2899 SM00062 Bacterial periplasmic substrate-binding proteins CH63_2900 SM01235 CH63_2900 CH63_291 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_291 SM00387 Histidine kinase-like ATPases CH63_291 SM00388 His Kinase A (phosphoacceptor) domain CH63_2911 SM00382 ATPases associated with a variety of cellular activities CH63_2912 SM01321 CH63_2912 CH63_2914 SM00420 helix_turn_helix, Deoxyribose operon repressor CH63_2914 SM01134 CH63_2914 CH63_2915 SM01007 Class II Aldolase and Adducin N-terminal domain CH63_2916 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH63_292 SM00448 cheY-homologous receiver domain CH63_292 SM00862 Transcriptional regulatory protein, C terminal CH63_2925 SM00382 ATPases associated with a variety of cellular activities CH63_2928 SM00861 Transketolase, pyrimidine binding domain CH63_2934 SM00382 ATPases associated with a variety of cellular activities CH63_2936 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH63_2946 SM01321 CH63_2946 CH63_2947 SM01091 Transporter associated domain CH63_2949 SM00382 ATPases associated with a variety of cellular activities CH63_2949 SM00962 SRP54-type protein, GTPase domain CH63_2949 SM00963 SRP54-type protein, helical bundle domain CH63_2954 SM01321 CH63_2954 CH63_2959 SM00448 cheY-homologous receiver domain CH63_2959 SM00850 LytTr DNA-binding domain CH63_296 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CH63_296 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CH63_2961 SM00830 Chorismate mutase type II CH63_2963 SM00382 ATPases associated with a variety of cellular activities CH63_2966 SM00830 Chorismate mutase type II CH63_2967 SM01321 CH63_2967 CH63_2970 SM00363 S4 RNA-binding domain CH63_2972 SM00382 ATPases associated with a variety of cellular activities CH63_2972 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_2980 SM00155 Phospholipase D. Active site motifs. CH63_2981 SM00881 CoA binding domain CH63_2982 SM01144 CH63_2982 CH63_2984 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH63_2987 SM00347 helix_turn_helix multiple antibiotic resistance protein CH63_299 SM00100 Cyclic nucleotide-monophosphate binding domain CH63_299 SM00419 helix_turn_helix, cAMP Regulatory protein CH63_2995 SM00062 Bacterial periplasmic substrate-binding proteins CH63_2998 SM00382 ATPases associated with a variety of cellular activities CH63_3 SM00382 ATPases associated with a variety of cellular activities CH63_3003 SM00912 haemagglutination activity domain CH63_3004 SM00710 Parallel beta-helix repeats CH63_301 SM00098 Alkaline phosphatase homologues CH63_3013 SM00900 CH63_3013 CH63_3023 SM01321 CH63_3023 CH63_3024 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CH63_3029 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH63_3031 SM01321 CH63_3031 CH63_3045 SM00448 cheY-homologous receiver domain CH63_3045 SM00862 Transcriptional regulatory protein, C terminal CH63_3046 SM00091 PAS domain CH63_3046 SM00387 Histidine kinase-like ATPases CH63_3046 SM00388 His Kinase A (phosphoacceptor) domain CH63_3050 SM00642 Alpha-amylase domain CH63_3058 SM01323 CH63_3058 CH63_3061 SM01321 CH63_3061 CH63_3070 SM01321 CH63_3070 CH63_3071 SM00861 Transketolase, pyrimidine binding domain CH63_3074 SM00981 CH63_3074 CH63_3092 SM00382 ATPases associated with a variety of cellular activities CH63_3092 SM00994 ClpX C4-type zinc finger CH63_3092 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_3093 SM00382 ATPases associated with a variety of cellular activities CH63_3093 SM00464 Found in ATP-dependent protease La (LON) CH63_3094 SM00411 bacterial (prokaryotic) histone like domain CH63_3102 SM00344 helix_turn_helix ASNC type CH63_3103 SM00382 ATPases associated with a variety of cellular activities CH63_3104 SM00382 ATPases associated with a variety of cellular activities CH63_3105 SM00938 Nitrogen regulatory protein P-II CH63_3123 SM00382 ATPases associated with a variety of cellular activities CH63_3125 SM00493 CH63_3125 CH63_3126 SM00387 Histidine kinase-like ATPases CH63_313 SM00382 ATPases associated with a variety of cellular activities CH63_3162 SM00422 helix_turn_helix, mercury resistance CH63_3164 SM00244 prohibitin homologues CH63_3166 SM00822 CH63_3166 CH63_3168 SM00382 ATPases associated with a variety of cellular activities CH63_3171 SM01001 AIR carboxylase CH63_3174 SM00840 CH63_3174 CH63_3176 SM01321 CH63_3176 CH63_318 SM00354 helix_turn _helix lactose operon repressor CH63_3187 SM00563 Phosphate acyltransferases CH63_3189 SM00195 Dual specificity phosphatase, catalytic domain CH63_3189 SM00404 Protein tyrosine phosphatase, catalytic domain motif CH63_3192 SM00382 ATPases associated with a variety of cellular activities CH63_3199 SM01217 CH63_3199 CH63_32 SM00382 ATPases associated with a variety of cellular activities CH63_3205 SM00869 Autotransporter beta-domain CH63_3217 SM01321 CH63_3217 CH63_3218 SM01359 CH63_3218 CH63_3218 SM01360 CH63_3218 CH63_3228 SM00382 ATPases associated with a variety of cellular activities CH63_3235 SM00382 ATPases associated with a variety of cellular activities CH63_3240 SM00421 helix_turn_helix, Lux Regulon CH63_3242 SM00357 Cold shock protein domain CH63_3245 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_3248 SM00936 Penicillin-binding protein 5, C-terminal domain CH63_3259 SM00382 ATPases associated with a variety of cellular activities CH63_3262 SM00062 Bacterial periplasmic substrate-binding proteins CH63_3264 SM00116 Domain in cystathionine beta-synthase and other proteins. CH63_3264 SM01091 Transporter associated domain CH63_3267 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_3281 SM01321 CH63_3281 CH63_3285 SM01081 Putative carbohydrate binding domain CH63_3295 SM00382 ATPases associated with a variety of cellular activities CH63_3300 SM00382 ATPases associated with a variety of cellular activities CH63_3309 SM00357 Cold shock protein domain CH63_3313 SM00382 ATPases associated with a variety of cellular activities CH63_3314 SM00382 ATPases associated with a variety of cellular activities CH63_3319 SM00988 UreE urease accessory protein, N-terminal domain CH63_332 SM00342 helix_turn_helix, arabinose operon control protein CH63_3332 SM00342 helix_turn_helix, arabinose operon control protein CH63_334 SM00382 ATPases associated with a variety of cellular activities CH63_3341 SM00448 cheY-homologous receiver domain CH63_3341 SM00862 Transcriptional regulatory protein, C terminal CH63_3342 SM00387 Histidine kinase-like ATPases CH63_3342 SM00388 His Kinase A (phosphoacceptor) domain CH63_3352 SM00796 Allophanate hydrolase subunit 1 CH63_3353 SM00797 Allophanate hydrolase subunit 2 CH63_3364 SM00248 ankyrin repeats CH63_3366 SM00487 DEAD-like helicases superfamily CH63_3366 SM00490 helicase superfamily c-terminal domain CH63_3376 SM00358 Double-stranded RNA binding motif CH63_3376 SM00535 Ribonuclease III family CH63_3381 SM01321 CH63_3381 CH63_3388 SM00062 Bacterial periplasmic substrate-binding proteins CH63_3389 SM01211 CH63_3389 CH63_339 SM00382 ATPases associated with a variety of cellular activities CH63_3393 SM01321 CH63_3393 CH63_3394 SM00387 Histidine kinase-like ATPases CH63_3394 SM00388 His Kinase A (phosphoacceptor) domain CH63_3396 SM00382 ATPases associated with a variety of cellular activities CH63_3396 SM00448 cheY-homologous receiver domain CH63_3398 SM00938 Nitrogen regulatory protein P-II CH63_3407 SM01321 CH63_3407 CH63_3414 SM00271 DnaJ molecular chaperone homology domain CH63_3422 SM00869 Autotransporter beta-domain CH63_3424 SM00247 Beta/gamma crystallins CH63_3425 SM00562 CH63_3425 CH63_3427 SM00028 Tetratricopeptide repeats CH63_3428 SM00530 Helix-turn-helix XRE-family like proteins CH63_3432 SM00564 beta-propeller repeat CH63_3437 SM00116 Domain in cystathionine beta-synthase and other proteins. CH63_3437 SM01240 CH63_3437 CH63_3439 SM01321 CH63_3439 CH63_3447 SM00490 helicase superfamily c-terminal domain CH63_3448 SM01321 CH63_3448 CH63_3454 SM01118 CH63_3454 CH63_3458 SM00382 ATPases associated with a variety of cellular activities CH63_3467 SM00382 ATPases associated with a variety of cellular activities CH63_347 SM00342 helix_turn_helix, arabinose operon control protein CH63_3470 SM00450 Rhodanese Homology Domain CH63_3474 SM00382 ATPases associated with a variety of cellular activities CH63_3481 SM00487 DEAD-like helicases superfamily CH63_3481 SM00488 CH63_3481 CH63_3481 SM00491 CH63_3481 CH63_3482 SM01060 CH63_3482 CH63_3485 SM00852 Probable molybdopterin binding domain CH63_349 SM00900 CH63_349 CH63_3491 SM00434 DNA Topoisomerase IV CH63_3492 SM00387 Histidine kinase-like ATPases CH63_3492 SM00388 His Kinase A (phosphoacceptor) domain CH63_3492 SM00448 cheY-homologous receiver domain CH63_3493 SM00421 helix_turn_helix, Lux Regulon CH63_3493 SM00448 cheY-homologous receiver domain CH63_3499 SM01321 CH63_3499 CH63_3505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH63_3505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_3508 SM00530 Helix-turn-helix XRE-family like proteins CH63_351 SM00478 endonuclease III CH63_351 SM00525 CH63_351 CH63_3511 SM01007 Class II Aldolase and Adducin N-terminal domain CH63_3512 SM00420 helix_turn_helix, Deoxyribose operon repressor CH63_3512 SM01134 CH63_3512 CH63_354 SM00357 Cold shock protein domain CH63_354 SM00955 CH63_354 CH63_3542 SM01321 CH63_3542 CH63_3544 SM00487 DEAD-like helicases superfamily CH63_3544 SM00490 helicase superfamily c-terminal domain CH63_3545 SM00363 S4 RNA-binding domain CH63_3548 SM00382 ATPases associated with a variety of cellular activities CH63_3552 SM00052 Putative diguanylate phosphodiesterase CH63_3555 SM00014 Acid phosphatase homologues CH63_3556 SM00833 Cobalamin synthesis protein cobW C-terminal domain CH63_3558 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_3558 SM00895 CH63_3558 CH63_3561 SM00841 Elongation factor P, C-terminal CH63_3561 SM01185 CH63_3561 CH63_3571 SM00382 ATPases associated with a variety of cellular activities CH63_3578 SM00862 Transcriptional regulatory protein, C terminal CH63_3583 SM00518 AP endonuclease family 2 CH63_359 SM01007 Class II Aldolase and Adducin N-terminal domain CH63_3591 SM00382 ATPases associated with a variety of cellular activities CH63_3598 SM00382 ATPases associated with a variety of cellular activities CH63_3598 SM00930 CH63_3598 CH63_3600 SM00936 Penicillin-binding protein 5, C-terminal domain CH63_3603 SM00420 helix_turn_helix, Deoxyribose operon repressor CH63_3603 SM01134 CH63_3603 CH63_3604 SM01133 CH63_3604 CH63_3605 SM00014 Acid phosphatase homologues CH63_3612 SM00382 ATPases associated with a variety of cellular activities CH63_3617 SM00062 Bacterial periplasmic substrate-binding proteins CH63_3617 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH63_3619 SM00244 prohibitin homologues CH63_362 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CH63_3623 SM00382 ATPases associated with a variety of cellular activities CH63_3629 SM00062 Bacterial periplasmic substrate-binding proteins CH63_3629 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH63_3630 SM00382 ATPases associated with a variety of cellular activities CH63_3631 SM00830 Chorismate mutase type II CH63_364 SM00028 Tetratricopeptide repeats CH63_3643 SM00382 ATPases associated with a variety of cellular activities CH63_3644 SM00357 Cold shock protein domain CH63_3646 SM00382 ATPases associated with a variety of cellular activities CH63_3646 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_3647 SM01321 CH63_3647 CH63_3648 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_3651 SM00382 ATPases associated with a variety of cellular activities CH63_3652 SM00382 ATPases associated with a variety of cellular activities CH63_3654 SM00344 helix_turn_helix ASNC type CH63_3655 SM00843 CH63_3655 CH63_3658 SM00382 ATPases associated with a variety of cellular activities CH63_366 SM00014 Acid phosphatase homologues CH63_3661 SM00382 ATPases associated with a variety of cellular activities CH63_3670 SM00870 CH63_3670 CH63_3676 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_3678 SM00411 bacterial (prokaryotic) histone like domain CH63_3681 SM00382 ATPases associated with a variety of cellular activities CH63_3683 SM01150 CH63_3683 CH63_3684 SM00357 Cold shock protein domain CH63_3692 SM01321 CH63_3692 CH63_3695 SM00849 Metallo-beta-lactamase superfamily CH63_3704 SM00981 CH63_3704 CH63_3705 SM00382 ATPases associated with a variety of cellular activities CH63_3709 SM01321 CH63_3709 CH63_371 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH63_371 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH63_371 SM00493 CH63_371 CH63_3710 SM00825 Beta-ketoacyl synthase CH63_3711 SM00382 ATPases associated with a variety of cellular activities CH63_3718 SM01321 CH63_3718 CH63_3725 SM00851 MGS-like domain CH63_3727 SM00881 CoA binding domain CH63_3728 SM00992 Hemimethylated DNA-binding protein YccV like CH63_3729 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH63_3741 SM00825 Beta-ketoacyl synthase CH63_3749 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH63_375 SM00822 CH63_375 CH63_3757 SM00382 ATPases associated with a variety of cellular activities CH63_3757 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_377 SM00363 S4 RNA-binding domain CH63_3776 SM00382 ATPases associated with a variety of cellular activities CH63_3780 SM00852 Probable molybdopterin binding domain CH63_3782 SM00382 ATPases associated with a variety of cellular activities CH63_3787 SM00829 Enoylreductase CH63_379 SM00481 DNA polymerase alpha chain like domain CH63_3793 SM00382 ATPases associated with a variety of cellular activities CH63_3796 SM00919 Malic enzyme, NAD binding domain CH63_3796 SM01274 CH63_3796 CH63_38 SM01040 BRO family, N-terminal domain CH63_3805 SM01321 CH63_3805 CH63_3811 SM01091 Transporter associated domain CH63_3815 SM01006 Siderophore biosynthesis protein domain CH63_3817 SM00382 ATPases associated with a variety of cellular activities CH63_3825 SM01350 CH63_3825 CH63_3837 SM00382 ATPases associated with a variety of cellular activities CH63_3838 SM00382 ATPases associated with a variety of cellular activities CH63_3845 SM00634 Bacterial Ig-like domain (group 1) CH63_3851 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH63_386 SM00749 bacterial OsmY and nodulation domain CH63_3861 SM00421 helix_turn_helix, Lux Regulon CH63_3861 SM00448 cheY-homologous receiver domain CH63_3871 SM00354 helix_turn _helix lactose operon repressor CH63_3879 SM00090 RIO-like kinase CH63_3880 SM00382 ATPases associated with a variety of cellular activities CH63_3882 SM00342 helix_turn_helix, arabinose operon control protein CH63_3892 SM00357 Cold shock protein domain CH63_3896 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH63_3896 SM00091 PAS domain CH63_3896 SM00267 diguanylate cyclase CH63_3897 SM00091 PAS domain CH63_3904 SM01091 Transporter associated domain CH63_3905 SM00347 helix_turn_helix multiple antibiotic resistance protein CH63_3916 SM00903 Flavin reductase like domain CH63_3922 SM00487 DEAD-like helicases superfamily CH63_3922 SM00490 helicase superfamily c-terminal domain CH63_3924 SM01022 CH63_3924 CH63_3940 SM01321 CH63_3940 CH63_3941 SM00634 Bacterial Ig-like domain (group 1) CH63_3944 SM00858 CH63_3944 CH63_3953 SM00047 Lysozyme subfamily 2 CH63_3957 SM01007 Class II Aldolase and Adducin N-terminal domain CH63_3961 SM00382 ATPases associated with a variety of cellular activities CH63_3976 SM00382 ATPases associated with a variety of cellular activities CH63_3983 SM00478 endonuclease III CH63_3987 SM00342 helix_turn_helix, arabinose operon control protein CH63_3995 SM00062 Bacterial periplasmic substrate-binding proteins CH63_3995 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH63_3997 SM00382 ATPases associated with a variety of cellular activities CH63_401 SM00155 Phospholipase D. Active site motifs. CH63_4014 SM00421 helix_turn_helix, Lux Regulon CH63_4014 SM00448 cheY-homologous receiver domain CH63_4015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH63_4015 SM00465 GIY-YIG type nucleases (URI domain) CH63_404 SM00382 ATPases associated with a variety of cellular activities CH63_4045 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_4045 SM00866 CH63_4045 CH63_405 SM00382 ATPases associated with a variety of cellular activities CH63_4050 SM00382 ATPases associated with a variety of cellular activities CH63_4054 SM00382 ATPases associated with a variety of cellular activities CH63_4058 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_4058 SM00866 CH63_4058 CH63_4074 SM00671 Sel1-like repeats. CH63_4076 SM00671 Sel1-like repeats. CH63_4087 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_4087 SM00387 Histidine kinase-like ATPases CH63_4087 SM00388 His Kinase A (phosphoacceptor) domain CH63_4088 SM00448 cheY-homologous receiver domain CH63_4088 SM00862 Transcriptional regulatory protein, C terminal CH63_4095 SM00450 Rhodanese Homology Domain CH63_4101 SM01400 CH63_4101 CH63_4105 SM00937 CH63_4105 CH63_4117 SM00382 ATPases associated with a variety of cellular activities CH63_4121 SM00481 DNA polymerase alpha chain like domain CH63_4130 SM00912 haemagglutination activity domain CH63_4131 SM00836 DALR anticodon binding domain CH63_4131 SM01016 Arginyl tRNA synthetase N terminal dom CH63_414 SM00382 ATPases associated with a variety of cellular activities CH63_4144 SM00857 Resolvase, N terminal domain CH63_4148 SM00155 Phospholipase D. Active site motifs. CH63_4156 SM00382 ATPases associated with a variety of cellular activities CH63_4163 SM00232 JAB/MPN domain CH63_4169 SM00635 Bacterial Ig-like domain 2 CH63_4175 SM00635 Bacterial Ig-like domain 2 CH63_4185 SM00382 ATPases associated with a variety of cellular activities CH63_4186 SM00470 ParB-like nuclease domain CH63_4187 SM00470 ParB-like nuclease domain CH63_4188 SM00487 DEAD-like helicases superfamily CH63_4188 SM00490 helicase superfamily c-terminal domain CH63_4194 SM01321 CH63_4194 CH63_420 SM01005 Alanine racemase, C-terminal domain CH63_4200 SM00062 Bacterial periplasmic substrate-binding proteins CH63_4208 SM00244 prohibitin homologues CH63_4212 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH63_4212 SM00475 5'-3' exonuclease CH63_4218 SM00481 DNA polymerase alpha chain like domain CH63_4227 SM00342 helix_turn_helix, arabinose operon control protein CH63_4233 SM00382 ATPases associated with a variety of cellular activities CH63_4235 SM00470 ParB-like nuclease domain CH63_4243 SM00382 ATPases associated with a variety of cellular activities CH63_4248 SM00470 ParB-like nuclease domain CH63_425 SM00644 CH63_425 CH63_4261 SM00364 Leucine-rich repeats, bacterial type CH63_427 SM00448 cheY-homologous receiver domain CH63_4275 SM00382 ATPases associated with a variety of cellular activities CH63_428 SM00448 cheY-homologous receiver domain CH63_4284 SM00342 helix_turn_helix, arabinose operon control protein CH63_429 SM00138 Methyltransferase, chemotaxis proteins CH63_430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH63_430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_430 SM00319 Homologues of the ligand binding domain of Tar CH63_4302 SM00194 Protein tyrosine phosphatase, catalytic domain CH63_4302 SM00404 Protein tyrosine phosphatase, catalytic domain motif CH63_4306 SM00220 Serine/Threonine protein kinases, catalytic domain CH63_431 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH63_431 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_431 SM00319 Homologues of the ligand binding domain of Tar CH63_4324 SM00857 Resolvase, N terminal domain CH63_4339 SM00382 ATPases associated with a variety of cellular activities CH63_434 SM00869 Autotransporter beta-domain CH63_4342 SM00530 Helix-turn-helix XRE-family like proteins CH63_439 SM00260 Two component signalling adaptor domain CH63_440 SM00073 Histidine Phosphotransfer domain CH63_440 SM00260 Two component signalling adaptor domain CH63_440 SM00387 Histidine kinase-like ATPases CH63_440 SM01231 CH63_440 CH63_446 SM00831 Cation transporter/ATPase, N-terminus CH63_448 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH63_448 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_448 SM00319 Homologues of the ligand binding domain of Tar CH63_451 SM00357 Cold shock protein domain CH63_452 SM01038 Beta galactosidase small chain CH63_453 SM00829 Enoylreductase CH63_455 SM00344 helix_turn_helix ASNC type CH63_463 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH63_463 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH63_465 SM00354 helix_turn _helix lactose operon repressor CH63_466 SM01329 CH63_466 CH63_473 SM00448 cheY-homologous receiver domain CH63_473 SM00862 Transcriptional regulatory protein, C terminal CH63_474 SM00387 Histidine kinase-like ATPases CH63_474 SM00388 His Kinase A (phosphoacceptor) domain CH63_475 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CH63_480 SM00382 ATPases associated with a variety of cellular activities CH63_482 SM00487 DEAD-like helicases superfamily CH63_482 SM00490 helicase superfamily c-terminal domain CH63_482 SM00982 CH63_482 CH63_482 SM01058 CarD-like/TRCF domain CH63_496 SM01321 CH63_496 CH63_5 SM00382 ATPases associated with a variety of cellular activities CH63_503 SM01321 CH63_503 CH63_504 SM00825 Beta-ketoacyl synthase CH63_506 SM00822 CH63_506 CH63_507 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH63_513 SM00363 S4 RNA-binding domain CH63_514 SM00316 Ribosomal protein S1-like RNA-binding domain CH63_522 SM00421 helix_turn_helix, Lux Regulon CH63_524 SM00450 Rhodanese Homology Domain CH63_527 SM00421 helix_turn_helix, Lux Regulon CH63_549 SM00354 helix_turn _helix lactose operon repressor CH63_55 SM00635 Bacterial Ig-like domain 2 CH63_551 SM00382 ATPases associated with a variety of cellular activities CH63_560 SM00912 haemagglutination activity domain CH63_566 SM01329 CH63_566 CH63_568 SM00354 helix_turn _helix lactose operon repressor CH63_570 SM00382 ATPases associated with a variety of cellular activities CH63_572 SM00829 Enoylreductase CH63_582 SM00062 Bacterial periplasmic substrate-binding proteins CH63_582 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH63_584 SM00382 ATPases associated with a variety of cellular activities CH63_585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH63_585 SM00091 PAS domain CH63_585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH63_588 SM00382 ATPases associated with a variety of cellular activities CH63_593 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH63_606 SM00354 helix_turn _helix lactose operon repressor CH63_61 SM00635 Bacterial Ig-like domain 2 CH63_619 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH63_619 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH63_620 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH63_627 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH63_634 SM00354 helix_turn _helix lactose operon repressor CH63_641 SM00052 Putative diguanylate phosphodiesterase CH63_643 SM00382 ATPases associated with a variety of cellular activities CH63_646 SM00062 Bacterial periplasmic substrate-binding proteins CH63_655 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH63_657 SM00342 helix_turn_helix, arabinose operon control protein CH63_662 SM00825 Beta-ketoacyl synthase CH63_67 SM00232 JAB/MPN domain CH63_670 SM00463 Small MutS-related domain CH63_671 SM00855 Phosphoglycerate mutase family CH63_685 SM00382 ATPases associated with a variety of cellular activities CH63_7 SM00257 Lysin motif CH63_700 SM00382 ATPases associated with a variety of cellular activities CH63_71 SM01040 BRO family, N-terminal domain CH63_714 SM00382 ATPases associated with a variety of cellular activities CH63_714 SM01086 C-terminal, D2-small domain, of ClpB protein CH63_723 SM00421 helix_turn_helix, Lux Regulon CH63_728 SM00382 ATPases associated with a variety of cellular activities CH63_732 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH63_755 SM01321 CH63_755 CH63_762 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH63_762 SM00292 breast cancer carboxy-terminal domain CH63_762 SM00532 Ligase N family CH63_763 SM00771 ZipA, C-terminal domain (FtsZ-binding) CH63_769 SM01321 CH63_769 CH63_77 SM00060 Fibronectin type 3 domain CH63_774 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_774 SM00387 Histidine kinase-like ATPases CH63_774 SM00388 His Kinase A (phosphoacceptor) domain CH63_775 SM00448 cheY-homologous receiver domain CH63_775 SM00862 Transcriptional regulatory protein, C terminal CH63_777 SM00382 ATPases associated with a variety of cellular activities CH63_778 SM00450 Rhodanese Homology Domain CH63_784 SM00327 von Willebrand factor (vWF) type A domain CH63_785 SM00387 Histidine kinase-like ATPases CH63_785 SM00388 His Kinase A (phosphoacceptor) domain CH63_786 SM00448 cheY-homologous receiver domain CH63_786 SM00862 Transcriptional regulatory protein, C terminal CH63_789 SM00382 ATPases associated with a variety of cellular activities CH63_798 SM00364 Leucine-rich repeats, bacterial type CH63_798 SM00369 Leucine-rich repeats, typical (most populated) subfamily CH63_800 SM01130 CH63_800 CH63_804 SM00869 Autotransporter beta-domain CH63_810 SM00919 Malic enzyme, NAD binding domain CH63_810 SM01274 CH63_810 CH63_814 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH63_817 SM00421 helix_turn_helix, Lux Regulon CH63_817 SM00448 cheY-homologous receiver domain CH63_826 SM00382 ATPases associated with a variety of cellular activities CH63_838 SM01321 CH63_838 CH63_840 SM01130 CH63_840 CH63_849 SM01321 CH63_849 CH63_857 SM00382 ATPases associated with a variety of cellular activities CH63_863 SM00924 MgtE intracellular N domain CH63_869 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_870 SM00382 ATPases associated with a variety of cellular activities CH63_875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH63_875 SM00388 His Kinase A (phosphoacceptor) domain CH63_876 SM00448 cheY-homologous receiver domain CH63_876 SM00862 Transcriptional regulatory protein, C terminal CH63_879 SM00046 Diacylglycerol kinase catalytic domain (presumed) CH63_88 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH63_894 SM00487 DEAD-like helicases superfamily CH63_894 SM00490 helicase superfamily c-terminal domain CH63_897 SM00382 ATPases associated with a variety of cellular activities CH63_903 SM00382 ATPases associated with a variety of cellular activities CH63_903 SM00448 cheY-homologous receiver domain CH63_904 SM00091 PAS domain CH63_904 SM00387 Histidine kinase-like ATPases CH63_904 SM00388 His Kinase A (phosphoacceptor) domain CH63_907 SM01321 CH63_907 CH63_916 SM01321 CH63_916 CH63_921 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_925 SM00487 DEAD-like helicases superfamily CH63_925 SM00490 helicase superfamily c-terminal domain CH63_926 SM00382 ATPases associated with a variety of cellular activities CH63_930 SM00729 Elongator protein 3, MiaB family, Radical SAM CH63_930 SM00876 Biotin and Thiamin Synthesis associated domain CH63_934 SM00382 ATPases associated with a variety of cellular activities CH63_939 SM00382 ATPases associated with a variety of cellular activities CH63_948 SM00855 Phosphoglycerate mutase family CH63_96 SM00763 PrkA AAA domain CH63_968 SM00881 CoA binding domain CH63_971 SM00861 Transketolase, pyrimidine binding domain CH63_984 SM01321 CH63_984 CH63_99 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH63_991 SM00778 Zinc-binding domain of primase-helicase CH63_998 SM00382 ATPases associated with a variety of cellular activities