locus_tag old_locus_tag gene Name start end strand product note type ID NCBI CH63_1 CH63_1 ruvC ruvC 13 267 + crossover junction endodeoxyribonuclease RuvC ruvC: crossover junction endodeoxyribonuclease RuvC~[L] COG0817 Holliday junction resolvasome%2C endonuclease subunit gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1 CH63_10 CH63_10 CH63_10 9640 10509 - SIS domain protein [K] COG1737 Transcriptional regulators gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_10 CH63_100 CH63_100 msrB msrB 92656 93069 + methionine-R-sulfoxide reductase [O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_100 CH63_1000 CH63_1000 CH63_1000 1072655 1072777 - hypothetical protein conserved hypothetical protein gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1000 CH63_1001 CH63_1001 CH63_1001 1073001 1074485 + permease for cytosine/purine%2C uracil%2C thiamine%2C allantoin family protein [FH] COG1953 Cytosine/uracil/thiamine/allantoin permeases gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1001 CH63_1002 CH63_1002 CH63_1002 1074542 1074618 - tRNA-Asp tRNA gene992 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1002 CH63_1003 CH63_1003 dnaQ dnaQ 1074731 1075495 - DNA polymerase III%2C epsilon subunit dnaQ_proteo: DNA polymerase III%2C epsilon subunit~[L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1003 CH63_1004 CH63_1004 CH63_1004 1075565 1076029 + RNase H family protein [L] COG0328 Ribonuclease HI gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1004 CH63_1005 CH63_1005 CH63_1005 1076084 1076803 - methyltransferase domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1005 CH63_1006 CH63_1006 gloB gloB 1076848 1077603 + hydroxyacylglutathione hydrolase GSH_gloB: hydroxyacylglutathione hydrolase~[R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1006 CH63_1007 CH63_1007 CH63_1007 1077675 1079063 + lysM domain protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1007 CH63_1008 CH63_1008 CH63_1008 1079105 1079887 - endonuclease/Exonuclease/phosphatase family protein [S] COG3021 Uncharacterized protein conserved in bacteria gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1008 CH63_1009 CH63_1009 CH63_1009 1080248 1080694 - hypothetical protein conserved hypothetical protein gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1009 CH63_101 CH63_101 CH63_101 93140 93412 + hypothetical protein conserved hypothetical protein~[S] COG3139 Uncharacterized protein conserved in bacteria gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_101 CH63_1010 CH63_1010 CH63_1010 1080747 1081550 - aldo/keto reductase family protein [R] COG0656 Aldo/keto reductases%2C related to diketogulonate reductase gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1010 CH63_1011 CH63_1011 CH63_1011 1081909 1081985 - tRNA-Asp tRNA gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1011 CH63_1012 CH63_1012 CH63_1012 1082111 1082223 - 5S ribosomal RNA rRNA gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1012 CH63_1013 CH63_1013 CH63_1013 1082337 1085239 - 23S ribosomal RNA rRNA gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1013 CH63_1014 CH63_1014 CH63_1014 1085495 1085570 - tRNA-Glu tRNA gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1014 CH63_1015 CH63_1015 CH63_1015 1085713 1087241 - 16S ribosomal RNA rRNA gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1015 CH63_1016 CH63_1016 gmhB gmhB 1087691 1088257 - D%2CD-heptose 1%2C7-bisphosphate phosphatase [E] COG0241 Histidinol phosphatase and related phosphatases gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1016 CH63_1017 CH63_1017 metN metN 1088444 1089475 + D-methionine ABC transporter%2C ATP-binding protein ABC_MetN: D-methionine ABC transporter%2C ATP-binding protein~[P] COG1135 ABC-type metal ion transport system%2C ATPase component gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1017 CH63_1018 CH63_1018 metI metI 1089468 1090121 + D-methionine transport system permease protein metI [P] COG2011 ABC-type metal ion transport system%2C permease component gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1018 CH63_1019 CH63_1019 metQ metQ 1090185 1091000 + D-methionine-binding lipoprotein metQ [P] COG1464 ABC-type metal ion transport system%2C periplasmic component/surface antigen gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1019 CH63_102 CH63_102 CH63_102 93546 94193 - isochorismatase family protein [Q] COG1335 Amidases related to nicotinamidase gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_102 CH63_1020 CH63_1020 CH63_1020 1091118 1091525 + putative protein rcsF gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1020 CH63_1021 CH63_1021 tsaA tsaA 1091522 1092229 + tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA~[S] COG1720 Uncharacterized conserved protein gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1021 CH63_1022 CH63_1022 proS proS 1092333 1094051 + proline--tRNA ligase proS_fam_II: proline--tRNA ligase~[J] COG0442 Prolyl-tRNA synthetase gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1022 CH63_1023 CH63_1023 CH63_1023 1094166 1094849 - hypothetical protein nlpE N-terminal domain protein~[MP] COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1023 CH63_1024 CH63_1024 CH63_1024 1094934 1095350 - RF-1 domain protein [J] COG1186 Protein chain release factor B gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1024 CH63_1025 CH63_1025 CH63_1025 1095353 1095901 - yaeQ family protein [S] COG4681 Uncharacterized protein conserved in bacteria gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1025 CH63_1026 CH63_1026 CH63_1026 1096143 1096343 + hypothetical protein conserved hypothetical protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1026 CH63_1027 CH63_1027 rof rof 1096330 1096590 + protein rof [K] COG4568 Transcriptional antiterminator gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1027 CH63_1028 CH63_1028 CH63_1028 1096855 1097172 - cytochrome c family protein [C] COG2863 Cytochrome c553 gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1028 CH63_1029 CH63_1029 tilS tilS 1097409 1098791 - tRNA(Ile)-lysidine synthetase lysidine_TilS_N: tRNA(Ile)-lysidine synthetase~[D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1029 CH63_103 CH63_103 ansA ansA 94208 95224 - cytoplasmic L-asparaginase I [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_103 CH63_1030 CH63_1030 CH63_1030 1098793 1099191 - glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein [E] COG0346 Lactoylglutathione lyase and related lyases gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1030 CH63_1031 CH63_1031 accA accA 1099375 1100334 - acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit accA: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~[I] COG0825 Acetyl-CoA carboxylase alpha subunit gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1031 CH63_1032 CH63_1032 dnaE dnaE 1100347 1103829 - DNA polymerase III%2C alpha subunit polc: DNA polymerase III%2C alpha subunit~[L] COG0587 DNA polymerase III%2C alpha subunit gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1032 CH63_1033 CH63_1033 rnhB rnhB 1103992 1104588 - ribonuclease HII [L] COG0164 Ribonuclease HII gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1033 CH63_1034 CH63_1034 lpxB lpxB 1104585 1105769 - lipid-A-disaccharide synthase lpxB: lipid-A-disaccharide synthase~[M] COG0763 Lipid A disaccharide synthetase gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1034 CH63_1035 CH63_1035 lpxA lpxA 1105773 1106561 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase~[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1035 CH63_1036 CH63_1036 fabZ fabZ 1106565 1107095 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1036 CH63_1037 CH63_1037 lpxD lpxD 1107253 1108275 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD~[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1037 CH63_1038 CH63_1038 CH63_1038 1108279 1108776 - outer membrane family protein [M] COG2825 Outer membrane protein gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1038 CH63_1039 CH63_1039 yaeT yaeT 1108934 1111321 - outer membrane assembly complex%2C YaeT protein OM_YaeT: outer membrane assembly complex%2C YaeT protein~[M] COG4775 Outer membrane protein/protective antigen OMA87 gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1039 CH63_104 CH63_104 sppA sppA 95341 97191 - signal peptide peptidase SppA%2C 67K type sppA_67K: signal peptide peptidase SppA%2C 67K type~[OU] COG0616 Periplasmic serine proteases (ClpP class) gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_104 CH63_1040 CH63_1040 rseP rseP 1111358 1112713 - RIP metalloprotease RseP [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1 gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1040 CH63_1041 CH63_1041 CH63_1041 1112742 1113590 - cytidylyltransferase family protein [I] COG0575 CDP-diglyceride synthetase gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1041 CH63_1042 CH63_1042 uppS uppS 1113600 1114358 - di-trans%2Cpoly-cis-decaprenylcistransferase uppS: di-trans%2Cpoly-cis-decaprenylcistransferase~[I] COG0020 Undecaprenyl pyrophosphate synthase gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1042 CH63_1043 CH63_1043 dxr dxr 1114582 1115778 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~[I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1043 CH63_1044 CH63_1044 frr frr 1115992 1116549 - ribosome recycling factor frr: ribosome recycling factor~[J] COG0233 Ribosome recycling factor gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1044 CH63_1045 CH63_1045 pyrH pyrH 1116685 1117410 - UMP kinase pyrH_bact: UMP kinase~[F] COG0528 Uridylate kinase gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1045 CH63_1046 CH63_1046 tsf tsf 1117619 1118476 - translation elongation factor Ts tsf: translation elongation factor Ts~[J] COG0264 Translation elongation factor Ts gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1046 CH63_1047 CH63_1047 rpsB rpsB 1118604 1119329 - ribosomal protein S2 rpsB_bact: ribosomal protein S2~[J] COG0052 Ribosomal protein S2 gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1047 CH63_1048 CH63_1048 map map 1119764 1120555 + methionine aminopeptidase%2C type I met_pdase_I: methionine aminopeptidase%2C type I~[J] COG0024 Methionine aminopeptidase gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1048 CH63_1049 CH63_1049 glnD glnD 1120615 1123296 + protein-P-II uridylyltransferase UTase_glnD: protein-P-II uridylyltransferase~[O] COG2844 UTP:GlnB (protein PII) uridylyltransferase gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1049 CH63_105 CH63_105 CH63_105 97354 97905 + nitroreductase family protein [C] COG0778 Nitroreductase gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_105 CH63_1050 CH63_1050 dapD dapD 1123471 1124295 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase dapD: 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase~[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1050 CH63_1051 CH63_1051 CH63_1051 1124476 1124934 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1051 CH63_1052 CH63_1052 CH63_1052 1125130 1125519 + hypothetical protein conserved hypothetical protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1052 CH63_1053 CH63_1053 CH63_1053 1125609 1126058 - flavodoxin family protein [C] COG0716 Flavodoxins gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1053 CH63_1054 CH63_1054 CH63_1054 1126086 1126859 - RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1054 CH63_1055 CH63_1055 CH63_1055 1126859 1127191 - tRNA pseudouridine synthase C family protein [S] COG3098 Uncharacterized protein conserved in bacteria gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1055 CH63_1056 CH63_1056 CH63_1056 1127445 1127903 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1056 CH63_1057 CH63_1057 CH63_1057 1128593 1129144 - syd family protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1057 CH63_1058 CH63_1058 queF queF 1129276 1130121 + queuine synthase queF: queuine synthase~[R] COG0780 Enzyme related to GTP cyclohydrolase I gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1058 CH63_1059 CH63_1059 CH63_1059 1130274 1131638 + hypothetical protein conserved hypothetical protein~[R] COG1611 Predicted Rossmann fold nucleotide-binding protein gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1059 CH63_106 CH63_106 selD selD 98130 99176 + selenide%2C water dikinase selD: selenide%2C water dikinase~[E] COG0709 Selenophosphate synthase gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_106 CH63_1060 CH63_1060 CH63_1060 1131898 1132653 + hypothetical protein 5'-3' exonuclease%2C C-terminal SAM fold family protein~[L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI) gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1060 CH63_1061 CH63_1061 CH63_1061 1132904 1134010 - ftsJ-like methyltransferase family protein [R] COG2933 Predicted SAM-dependent methyltransferase gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1061 CH63_1062 CH63_1062 CH63_1062 1134003 1134398 - hypothetical protein conserved hypothetical protein~[S] COG2363 Uncharacterized small membrane protein gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1062 CH63_1063 CH63_1063 gcvA gcvA 1134564 1135481 - glycine cleavage system transcriptional activator [K] COG0583 Transcriptional regulator gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1063 CH63_1064 CH63_1064 CH63_1064 1135945 1136064 - hypothetical protein conserved hypothetical protein gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1064 CH63_1065 CH63_1065 csdA csdA 1136141 1137346 + cysteine desulfurase%2C catalytic subunit CsdA feS_syn_CsdA: cysteine desulfurase%2C catalytic subunit CsdA~[E] COG0520 Selenocysteine lyase gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1065 CH63_1066 CH63_1066 csdE csdE 1137484 1137924 + cysteine desulfurase%2C sulfur acceptor subunit CsdE feS_syn_CsdE: cysteine desulfurase%2C sulfur acceptor subunit CsdE~[R] COG2166 SufE protein probably involved in Fe-S center assembly gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1066 CH63_1067 CH63_1067 CH63_1067 1137960 1138787 - thiF family protein [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1067 CH63_1068 CH63_1068 CH63_1068 1138930 1140102 - mltA specific insert domain protein [M] COG2821 Membrane-bound lytic murein transglycosylase gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1068 CH63_1069 CH63_1069 CH63_1069 1140318 1140394 + tRNA-Met tRNA gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1069 CH63_107 CH63_107 topB topB 99238 101163 + DNA topoisomerase 3 [L] COG0550 Topoisomerase IA gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_107 CH63_1070 CH63_1070 CH63_1070 1140518 1140594 + tRNA-Met tRNA gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1070 CH63_1071 CH63_1071 CH63_1071 1140824 1142074 - N-acetylmuramoyl-L-alanine amidase family protein [M] COG0860 N-acetylmuramoyl-L-alanine amidase gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1071 CH63_1072 CH63_1072 argA argA 1142310 1143635 + amino-acid N-acetyltransferase N-Ac-Glu-synth: amino-acid N-acetyltransferase~[E] COG0548 Acetylglutamate kinase gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1072 CH63_1073 CH63_1073 recD recD 1143790 1145748 - exodeoxyribonuclease V%2C alpha subunit recD: exodeoxyribonuclease V%2C alpha subunit~[L] COG0507 ATP-dependent exoDNAse (exonuclease V)%2C alpha subunit - helicase superfamily I member gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1073 CH63_1074 CH63_1074 recB recB 1145745 1149407 - exodeoxyribonuclease V%2C beta subunit recB: exodeoxyribonuclease V%2C beta subunit~[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1074 CH63_1075 CH63_1075 CH63_1075 1149404 1152292 - insulinase family protein [O] COG1025 Secreted/periplasmic Zn-dependent peptidases%2C insulinase-like gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1075 CH63_1076 CH63_1076 recC recC 1152374 1155745 - exodeoxyribonuclease V%2C gamma subunit recC: exodeoxyribonuclease V%2C gamma subunit~[L] COG1330 Exonuclease V gamma subunit gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1076 CH63_1077 CH63_1077 CH63_1077 1155880 1156290 - hypothetical protein conserved hypothetical protein~[NU] COG4967 Tfp pilus assembly protein PilV gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1077 CH63_1078 CH63_1078 CH63_1078 1156278 1156748 - hypothetical protein conserved hypothetical protein gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1078 CH63_1079 CH63_1079 CH63_1079 1156745 1157353 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[U] COG4795 Type II secretory pathway%2C component PulJ gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1079 CH63_108 CH63_108 CH63_108 101160 101450 + hypothetical protein conserved hypothetical protein gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_108 CH63_1080 CH63_1080 CH63_1080 1157344 1157913 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1080 CH63_1081 CH63_1081 CH63_1081 1157900 1158121 - putative membrane protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1081 CH63_1082 CH63_1082 thyA thyA 1158141 1158935 - thymidylate synthase thym_sym: thymidylate synthase~[F] COG0207 Thymidylate synthase gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1082 CH63_1083 CH63_1083 lgt lgt 1158942 1159814 - prolipoprotein diacylglyceryl transferase lgt: prolipoprotein diacylglyceryl transferase~[M] COG0682 Prolipoprotein diacylglyceryltransferase gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1083 CH63_1084 CH63_1084 CH63_1084 1160065 1160910 - PEP-utilizing enzyme%2C TIM barrel domain protein [T] COG3605 Signal transduction protein containing GAF and PtsI domains gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1084 CH63_1085 CH63_1085 CH63_1085 1160946 1162304 - GAF domain protein [T] COG3605 Signal transduction protein containing GAF and PtsI domains gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1085 CH63_1086 CH63_1086 rppH rppH 1162323 1162850 - RNA pyrophosphohydrolase [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1086 CH63_1087 CH63_1087 mutH mutH 1163548 1164234 + DNA mismatch repair endonuclease MutH mutH_TIGR: DNA mismatch repair endonuclease MutH~[L] COG3066 DNA mismatch repair protein gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1087 CH63_1088 CH63_1088 CH63_1088 1164641 1165681 + aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1088 CH63_1089 CH63_1089 CH63_1089 1166058 1166309 - hypothetical protein conserved hypothetical protein gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1089 CH63_109 CH63_109 nudG nudG 101463 101849 - CTP pyrophosphohydrolase [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_109 CH63_1090 CH63_1090 CH63_1090 1166457 1166621 + hypothetical protein conserved hypothetical protein~[S] COG3122 Uncharacterized protein conserved in bacteria gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1090 CH63_1091 CH63_1091 CH63_1091 1166650 1167870 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1091 CH63_1092 CH63_1092 CH63_1092 1167867 1169825 - acyltransferase family protein [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1092 CH63_1093 CH63_1093 CH63_1093 1169813 1170022 - putative long-chain-fatty-acid--(Acyl-carrier-) ligase / acyl-(Acyl-carrier-protein)-phospholipid O-acyltransferase [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1093 CH63_1094 CH63_1094 CH63_1094 1170471 1172597 - molybdopterin oxidoreductase family protein [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1094 CH63_1095 CH63_1095 lysA lysA 1174061 1175323 - diaminopimelate decarboxylase lysA: diaminopimelate decarboxylase~[E] COG0019 Diaminopimelate decarboxylase gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1095 CH63_1096 CH63_1096 CH63_1096 1173042 1174064 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1096 CH63_1097 CH63_1097 CH63_1097 1176476 1177540 - sugar (and other) transporter family protein [G] COG2814 Arabinose efflux permease gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1097 CH63_1098 CH63_1098 CH63_1098 1175538 1176479 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1098 CH63_1099 CH63_1099 CH63_1099 1178004 1178912 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1099 CH63_11 CH63_11 zwf zwf 10871 12346 + glucose-6-phosphate dehydrogenase zwf: glucose-6-phosphate dehydrogenase~[G] COG0364 Glucose-6-phosphate 1-dehydrogenase gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_11 CH63_110 CH63_110 xth xth 101947 102753 - exodeoxyribonuclease III exoDNase_III: exodeoxyribonuclease III~[L] COG0708 Exonuclease III gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_110 CH63_1100 CH63_1100 CH63_1100 1179019 1179906 + metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1100 CH63_1101 CH63_1101 CH63_1101 1180640 1182319 - methyl-accepting chemotaxis (MCP) signaling domain protein pseudogene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1101 CH63_1102 CH63_1102 CH63_1102 1180019 1180654 + DSBA-like thioredoxin domain protein [O] COG3531 Predicted protein-disulfide isomerase gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1102 CH63_1104 CH63_1104 CH63_1104 1182486 1182887 - hypothetical protein conserved hypothetical protein gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1104 CH63_1105 CH63_1105 CH63_1105 1182884 1183600 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1105 CH63_1106 CH63_1106 CH63_1106 1183884 1184189 + bacterial chaperone lipo family protein gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1106 CH63_1107 CH63_1107 CH63_1107 1184241 1185083 - type IV leader peptidase family protein [NOU] COG1989 Type II secretory pathway%2C prepilin signal peptidase PulO and related peptidases gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1107 CH63_1108 CH63_1108 CH63_1108 1185109 1185558 - putative membrane protein gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1108 CH63_1109 CH63_1109 gspL gspL 1185567 1186757 - type II secretion system protein L typeII_sec_gspL: type II secretion system protein L~[U] COG3297 Type II secretory pathway%2C component PulL gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1109 CH63_111 CH63_111 CH63_111 103563 104423 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_111 CH63_1110 CH63_1110 CH63_1110 1186741 1187697 - type II secretion system (T2SS)%2C K family protein [U] COG3156 Type II secretory pathway%2C component PulK gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1110 CH63_1111 CH63_1111 gspJ gspJ 1187706 1188302 - type II secretion system protein J gspJ: type II secretion system protein J~[U] COG4795 Type II secretory pathway%2C component PulJ gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1111 CH63_1112 CH63_1112 CH63_1112 1188295 1188585 - type II secretion system (T2SS)%2C I family protein [NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1112 CH63_1113 CH63_1113 CH63_1113 1188677 1189219 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1113 CH63_1114 CH63_1114 gspG gspG 1189224 1189661 - type II secretion system protein G typeII_sec_gspG: type II secretion system protein G~[NU] COG2165 Type II secretory pathway%2C pseudopilin PulG gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1114 CH63_1115 CH63_1115 CH63_1115 1189681 1190652 - type II secretion system (T2SS)%2C F family protein [NU] COG1459 Type II secretory pathway%2C component PulF gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1115 CH63_1116 CH63_1116 gspF gspF 1190688 1190882 - general secretion pathway F domain protein gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1116 CH63_1117 CH63_1117 gspE gspE 1190869 1192380 - type II secretion system protein E type_II_gspE: type II secretion system protein E~[NU] COG2804 Type II secretory pathway%2C ATPase PulE/Tfp pilus assembly pathway%2C ATPase PilB gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1117 CH63_1118 CH63_1118 gspD gspD 1192377 1194299 - type II secretion system protein D type_II_gspD: type II secretion system protein D~[NU] COG1450 Type II secretory pathway%2C component PulD gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1118 CH63_1119 CH63_1119 CH63_1119 1194380 1194883 - type IV pilus biogenesis family protein gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1119 CH63_112 CH63_112 CH63_112 104931 105015 - tRNA-Tyr tRNA gene111 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_112 CH63_1120 CH63_1120 CH63_1120 1194951 1195367 - hypothetical protein conserved hypothetical protein gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1120 CH63_1121 CH63_1121 CH63_1121 1196110 1196865 - Tat (twin-arginine translocation) pathway signal sequence domain protein TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence domain protein~[P] COG0288 Carbonic anhydrase gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1121 CH63_1122 CH63_1122 CH63_1122 1197361 1197549 + putative hyaluronate lyase gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1122 CH63_1123 CH63_1123 CH63_1123 1198152 1199102 + hypothetical protein conserved hypothetical protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1123 CH63_1124 CH63_1124 CH63_1124 1199217 1201403 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[S] COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1124 CH63_1125 CH63_1125 CH63_1125 1201473 1204586 + chondroitin ABC endolyase 1 gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1125 CH63_1126 CH63_1126 CH63_1126 1204931 1205710 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1126 CH63_1127 CH63_1127 CH63_1127 1205710 1206732 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1127 CH63_1128 CH63_1128 CH63_1128 1206978 1207223 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1128 CH63_1129 CH63_1129 CH63_1129 1207675 1209228 - type I phosphodiesterase / nucleotide pyrophosphatase family protein [P] COG3119 Arylsulfatase A and related enzymes gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1129 CH63_1130 CH63_1130 CH63_1130 1210068 1210844 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1130 CH63_1131 CH63_1131 CH63_1131 1210894 1212192 + D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit agaZ_gatZ: D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit~[G] COG4573 Predicted tagatose 6-phosphate kinase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1131 CH63_1132 CH63_1132 CH63_1132 1212189 1213355 + sugar isomerase%2C AgaS family protein agaS_fam: sugar isomerase%2C AgaS family protein~[M] COG2222 Predicted phosphosugar isomerases gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1132 CH63_1133 CH63_1133 CH63_1133 1213373 1213870 + PTS system%2C mannose/fructose/sorbose%2C IIB component family protein pts-sorbose: PTS system%2C mannose/fructose/sorbose%2C IIB component family protein~[G] COG3444 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IIB gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1133 CH63_1134 CH63_1134 CH63_1134 1213917 1214705 + PTS system sorbose-specific iic component family protein [G] COG3715 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IIC gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1134 CH63_1135 CH63_1135 CH63_1135 1214695 1215585 + PTS system mannose/fructose/sorbose IID component family protein [G] COG3716 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IID gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1135 CH63_1136 CH63_1136 CH63_1136 1215671 1216111 + PTS system fructose IIA component family protein [G] COG2893 Phosphotransferase system%2C mannose/fructose-specific component IIA gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1136 CH63_1137 CH63_1137 nagA nagA 1216114 1217280 + N-acetylglucosamine-6-phosphate deacetylase nagA: N-acetylglucosamine-6-phosphate deacetylase~[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1137 CH63_1138 CH63_1138 CH63_1138 1217476 1217973 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1138 CH63_1139 CH63_1139 CH63_1139 1217931 1218230 + enoyl-(Acyl carrier) reductase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1139 CH63_114 CH63_114 purU purU 106466 107335 - formyltetrahydrofolate deformylase purU: formyltetrahydrofolate deformylase~[F] COG0788 Formyltetrahydrofolate hydrolase gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_114 CH63_1140 CH63_1140 CH63_1140 1218246 1219304 + glycosyl Hydrolase Family 88 family protein [R] COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties%2C and related proteins gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1140 CH63_1141 CH63_1141 CH63_1141 1219548 1220774 + anaerobic sulfatase maturase sulfatase_rSAM: anaerobic sulfatase maturase~[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1141 CH63_1142 CH63_1142 CH63_1142 1220795 1222402 + type I phosphodiesterase / nucleotide pyrophosphatase family protein [P] COG3119 Arylsulfatase A and related enzymes gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1142 CH63_1143 CH63_1143 CH63_1143 1222525 1224012 + hypothetical protein conserved hypothetical protein~[S] COG4289 Uncharacterized protein conserved in bacteria gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1143 CH63_1144 CH63_1144 CH63_1144 1224121 1224975 + class II aldolase%2C tagatose bisphosphate family tag_bisphos_ald: class II aldolase%2C tagatose bisphosphate family~[G] COG0191 Fructose/tagatose bisphosphate aldolase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1144 CH63_1145 CH63_1145 CH63_1145 1225547 1225828 - hypothetical protein conserved hypothetical protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1145 CH63_1146 CH63_1146 CH63_1146 1224999 1225577 + DJ-1/PfpI family protein [R] COG0693 Putative intracellular protease/amidase gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1146 CH63_1147 CH63_1147 CH63_1147 1225914 1226900 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1147 CH63_1148 CH63_1148 CH63_1148 1227294 1228601 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1148 CH63_1149 CH63_1149 CH63_1149 1228752 1231127 + glycosyl hydrolases 31 family protein [G] COG1501 Alpha-glucosidases%2C family 31 of glycosyl hydrolases gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1149 CH63_115 CH63_115 CH63_115 105295 106503 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_115 CH63_1150 CH63_1150 CH63_1150 1231472 1232545 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1150 CH63_1151 CH63_1151 CH63_1151 1232817 1234076 + lamB porin family protein [G] COG4580 Maltoporin (phage lambda and maltose receptor) gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1151 CH63_1152 CH63_1152 CH63_1152 1234449 1234760 - PTS system%2C glucose-like IIB component domain protein EIIB_glc: PTS system%2C glucose-like IIB component domain protein~[G] COG1264 Phosphotransferase system IIB components gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1152 CH63_1153 CH63_1153 CH63_1153 1234872 1236932 - beta-galactosidase family protein [G] COG1874 Beta-galactosidase gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1153 CH63_1154 CH63_1154 CH63_1154 1236983 1238185 - glycosyl hydrolase 53 family protein [G] COG3867 Arabinogalactan endo-1%2C4-beta-galactosidase gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1154 CH63_1155 CH63_1155 CH63_1155 1238190 1239041 - binding--dependent transport system inner membrane component family protein [G] COG3833 ABC-type maltose transport systems%2C permease component gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1155 CH63_1156 CH63_1156 CH63_1156 1239053 1240360 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1156 CH63_1157 CH63_1157 CH63_1157 1240520 1241755 - bacterial extracellular solute-binding family protein [G] COG2182 Maltose-binding periplasmic proteins/domains gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1157 CH63_1158 CH63_1158 CH63_1158 1242118 1243224 + ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1158 CH63_1159 CH63_1159 CH63_1159 1243773 1245281 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1159 CH63_116 CH63_116 CH63_116 107419 107883 - SEC-C motif family protein [S] COG3012 Uncharacterized protein conserved in bacteria gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_116 CH63_1160 CH63_1160 CH63_1160 1245353 1246357 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1160 CH63_1161 CH63_1161 CH63_1161 1246792 1247793 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1161 CH63_1162 CH63_1162 CH63_1162 1248572 1249090 + putative exported protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1162 CH63_1163 CH63_1163 CH63_1163 1249466 1250323 + hypothetical protein conserved hypothetical protein gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1163 CH63_1164 CH63_1164 CH63_1164 1250747 1251427 + transcriptional regulator PadR-like family protein [K] COG1695 Predicted transcriptional regulators gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1164 CH63_1165 CH63_1165 CH63_1165 1251427 1251747 + hypothetical protein conserved hypothetical protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1165 CH63_1166 CH63_1166 CH63_1166 1251830 1252096 - PAAR motif family protein [S] COG4104 Uncharacterized conserved protein gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1166 CH63_1167 CH63_1167 CH63_1167 1252352 1253131 - putative membrane protein gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1167 CH63_1168 CH63_1168 CH63_1168 1253736 1254503 - hypothetical protein conserved hypothetical protein gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1168 CH63_1169 CH63_1169 CH63_1169 1254473 1256632 - hypothetical protein conserved hypothetical protein gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1169 CH63_117 CH63_117 CH63_117 109217 110233 + response regulator [T] COG0784 FOG: CheY-like receiver gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_117 CH63_1170 CH63_1170 CH63_1170 1257042 1257326 - bacterial self-protective colicin-like immunity family protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1170 CH63_1171 CH63_1171 CH63_1171 1257373 1257576 - hypothetical protein conserved hypothetical protein gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1171 CH63_1172 CH63_1172 CH63_1172 1257949 1258143 - cysteine-rich CPCC family protein gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1172 CH63_1173 CH63_1173 CH63_1173 1258140 1259678 - hypothetical protein conserved hypothetical protein~[R] COG5529 Pyocin large subunit gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1173 CH63_1174 CH63_1174 CH63_1174 1260185 1261327 - fic/DOC family protein [S] COG3177 Uncharacterized conserved protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1174 CH63_1175 CH63_1175 CH63_1175 1261596 1261961 + hypothetical protein conserved hypothetical protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1175 CH63_1176 CH63_1176 CH63_1176 1261974 1262210 + hypothetical protein conserved hypothetical protein gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1176 CH63_1177 CH63_1177 CH63_1177 1262216 1262548 + hypothetical protein conserved hypothetical protein gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1177 CH63_1178 CH63_1178 CH63_1178 1262730 1262930 + prophage CP4-57 regulatory family protein [K] COG3311 Predicted transcriptional regulator gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1178 CH63_1179 CH63_1179 CH63_1179 1263089 1263415 - hypothetical protein conserved hypothetical protein gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1179 CH63_118 CH63_118 CH63_118 110540 111886 + nucleotide sugar dehydrogenase family protein NDP-sugDHase: nucleotide sugar dehydrogenase family protein~[M] COG1004 Predicted UDP-glucose 6-dehydrogenase gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_118 CH63_1180 CH63_1180 CH63_1180 1263715 1266006 + zinc-binding domain of primase-helicase family protein [S] COG4643 Uncharacterized protein conserved in bacteria gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1180 CH63_1181 CH63_1181 mqsA mqsA 1266406 1266801 - antitoxin MqsA [K] COG1396 Predicted transcriptional regulators gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1181 CH63_1182 CH63_1182 mqsR mqsR 1266804 1267100 - mRNA interferase MqsR gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1182 CH63_1183 CH63_1183 CH63_1183 1267264 1267626 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1183 CH63_1184 CH63_1184 CH63_1184 1267689 1267949 - plasmid stabilization system family protein [JD] COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1184 CH63_1185 CH63_1185 CH63_1185 1268547 1268732 + hypothetical protein conserved hypothetical protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1185 CH63_1186 CH63_1186 CH63_1186 1268814 1270028 - hypothetical protein phage integrase%2C N-terminal SAM-like domain protein~[L] COG0582 Integrase gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1186 CH63_1187 CH63_1187 CH63_1187 1270194 1270267 - tRNA-Gly tRNA gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1187 CH63_1188 CH63_1188 lysS lysS 1270461 1271978 - lysine--tRNA ligase lysS_bact: lysine--tRNA ligase~[J] COG1190 Lysyl-tRNA synthetase (class II) gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1188 CH63_1189 CH63_1189 prfB prfB 1271988 1272920 - peptide chain release factor 2 prfB: peptide chain release factor 2~[J] COG1186 Protein chain release factor B gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1189 CH63_119 CH63_119 hns hns 112321 112728 - DNA-binding protein H-NS [R] COG2916 DNA-binding protein H-NS gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_119 CH63_1190 CH63_1190 recJ recJ 1273265 1274998 - single-stranded-DNA-specific exonuclease RecJ recJ: single-stranded-DNA-specific exonuclease RecJ~[L] COG0608 Single-stranded DNA-specific exonuclease gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1190 CH63_1191 CH63_1191 CH63_1191 1275005 1275721 - DSBA-like thioredoxin domain protein [O] COG1651 Protein-disulfide isomerase gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1191 CH63_1192 CH63_1192 xerD xerD 1275752 1276651 - tyrosine recombinase XerD recomb_XerD: tyrosine recombinase XerD~[L] COG4974 Site-specific recombinase XerD gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1192 CH63_1193 CH63_1193 CH63_1193 1276758 1277276 + flavodoxin flav_long: flavodoxin~[C] COG0716 Flavodoxins gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1193 CH63_1194 CH63_1194 CH63_1194 1277366 1278823 - inner membrane CreD family protein [V] COG4452 Inner membrane protein involved in colicin E2 resistance gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1194 CH63_1195 CH63_1195 CH63_1195 1278944 1280362 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1195 CH63_1196 CH63_1196 CH63_1196 1280387 1281085 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1196 CH63_1197 CH63_1197 CH63_1197 1281491 1281757 - flavinator of succinate dehydrogenase family protein [S] COG2938 Uncharacterized conserved protein gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1197 CH63_1198 CH63_1198 CH63_1198 1282074 1283066 + aminomethyltransferase folate-binding domain protein [R] COG0354 Predicted aminomethyltransferase related to GcvT gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1198 CH63_1199 CH63_1199 CH63_1199 1283139 1283636 - hypothetical protein conserved hypothetical protein~[S] COG5472 Predicted small integral membrane protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1199 CH63_12 CH63_12 CH63_12 12390 12581 + hypothetical protein conserved hypothetical protein gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_12 CH63_120 CH63_120 CH63_120 113478 114068 + thymidine kinase family protein [F] COG1435 Thymidine kinase gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_120 CH63_1200 CH63_1200 CH63_1200 1283894 1284595 - channel%2C hemolysin III family protein hlyIII: channel%2C hemolysin III family protein~[R] COG1272 Predicted membrane protein%2C hemolysin III homolog gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1200 CH63_1201 CH63_1201 CH63_1201 1284797 1285900 - putative exported protein gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1201 CH63_1202 CH63_1202 CH63_1202 1286004 1287980 - coiled stalk of trimeric autotransporter adhesin family protein [UW] COG5295 Autotransporter adhesin gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1202 CH63_1203 CH63_1203 CH63_1203 1287977 1288129 - hemagglutinin repeat domain protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1203 CH63_1204 CH63_1204 CH63_1204 1289190 1289627 - lipocalin-like domain protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1204 CH63_1205 CH63_1205 gcvP gcvP 1290005 1292884 - glycine dehydrogenase gcvP: glycine dehydrogenase~[E] COG1003 Glycine cleavage system protein P (pyridoxal-binding)%2C C-terminal domain gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1205 CH63_1206 CH63_1206 gcvH gcvH 1293096 1293482 - glycine cleavage system H protein gcvH: glycine cleavage system H protein~[E] COG0509 Glycine cleavage system H protein (lipoate-binding) gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1206 CH63_1207 CH63_1207 gcvT gcvT 1293551 1294648 - glycine cleavage system T protein gcvT: glycine cleavage system T protein~[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase) gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1207 CH63_1208 CH63_1208 CH63_1208 1295367 1296587 - ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein ubi-OHases: ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1208 CH63_1209 CH63_1209 ubiH ubiH 1296760 1297938 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase ubiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1209 CH63_121 CH63_121 CH63_121 114437 115216 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_121 CH63_1210 CH63_1210 CH63_1210 1298007 1299320 - hypothetical protein aminopeptidase P%2C N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1210 CH63_1211 CH63_1211 CH63_1211 1299408 1299986 - yecA family protein ygfB_yecA: yecA family protein~[S] COG3079 Uncharacterized protein conserved in bacteria gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1211 CH63_1212 CH63_1212 zapA zapA 1300323 1300652 + cell division protein ZapA [S] COG3027 Uncharacterized protein conserved in bacteria gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1212 CH63_1213 CH63_1213 CH63_1213 1301016 1301612 + 5-formyltetrahydrofolate cyclo-ligase MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase~[H] COG0212 5-formyltetrahydrofolate cyclo-ligase gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1213 CH63_1214 CH63_1214 CH63_1214 1301877 1303118 - ACT domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1214 CH63_1215 CH63_1215 rpiA rpiA 1303425 1304081 - ribose 5-phosphate isomerase A rpiA: ribose 5-phosphate isomerase A~[G] COG0120 Ribose 5-phosphate isomerase gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1215 CH63_1216 CH63_1216 iciA iciA 1304423 1305331 + chromosome initiation inhibitor [K] COG0583 Transcriptional regulator gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1216 CH63_1217 CH63_1217 CH63_1217 1305342 1306121 - hypothetical protein conserved hypothetical protein~[S] COG2968 Uncharacterized conserved protein gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1217 CH63_1218 CH63_1218 lysE lysE 1306311 1306928 - L-lysine exporter family protein 2a75: L-lysine exporter family protein~[R] COG1279 Lysine efflux permease gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1218 CH63_1219 CH63_1219 CH63_1219 1307191 1308060 - mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1219 CH63_122 CH63_122 CH63_122 115216 116238 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_122 CH63_1220 CH63_1220 fbaA fbaA 1308498 1309577 - fructose-bisphosphate aldolase%2C class II fruBisAldo_II_A: fructose-bisphosphate aldolase%2C class II~[G] COG0191 Fructose/tagatose bisphosphate aldolase gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1220 CH63_1221 CH63_1221 CH63_1221 1309697 1310860 - phosphoglycerate kinase family protein [G] COG0126 3-phosphoglycerate kinase gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1221 CH63_1222 CH63_1222 epd epd 1310963 1311979 - erythrose-4-phosphate dehydrogenase E4PD_g-proteo: erythrose-4-phosphate dehydrogenase~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1222 CH63_1223 CH63_1223 CH63_1223 1312320 1312778 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1223 CH63_1224 CH63_1224 tkt tkt 1313086 1315080 - transketolase tktlase_bact: transketolase~[G] COG0021 Transketolase gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1224 CH63_1225 CH63_1225 CH63_1225 1315571 1316323 + peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1225 CH63_1226 CH63_1226 CH63_1226 1316613 1316933 - rieske [2Fe-2S] domain protein [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1226 CH63_1227 CH63_1227 speA speA 1317093 1319072 - arginine decarboxylase speA: arginine decarboxylase~[E] COG1166 Arginine decarboxylase (spermidine biosynthesis) gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1227 CH63_1228 CH63_1228 CH63_1228 1319318 1319479 - hypothetical protein conserved hypothetical protein gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1228 CH63_1229 CH63_1229 metK metK 1320279 1321433 + methionine adenosyltransferase metK: methionine adenosyltransferase~[H] COG0192 S-adenosylmethionine synthetase gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1229 CH63_123 CH63_123 CH63_123 116645 117034 + ASCH domain protein [S] COG4405 Uncharacterized protein conserved in bacteria gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_123 CH63_1230 CH63_1230 CH63_1230 1321626 1322138 + peptidase MA superfamily protein [S] COG3091 Uncharacterized protein conserved in bacteria gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1230 CH63_1231 CH63_1231 CH63_1231 1322236 1322943 + endonuclease I family protein [L] COG2356 Endonuclease I gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1231 CH63_1232 CH63_1232 rsmE rsmE 1323204 1323935 + ribosomal RNA small subunit methyltransferase E [S] COG1385 Uncharacterized protein conserved in bacteria gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1232 CH63_1233 CH63_1233 gshB gshB 1323961 1324920 + glutathione synthase glut_syn: glutathione synthase~[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1233 CH63_1234 CH63_1234 CH63_1234 1325036 1325599 + hypothetical protein conserved hypothetical protein~[K] COG1678 Putative transcriptional regulator gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1234 CH63_1235 CH63_1235 CH63_1235 1325599 1326021 + hypothetical protein conserved hypothetical protein~[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1235 CH63_1236 CH63_1236 aguB aguB 1326201 1327085 + N-carbamoylputrescine amidase agmatine_aguB: N-carbamoylputrescine amidase~[R] COG0388 Predicted amidohydrolase gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1236 CH63_1237 CH63_1237 aguA aguA 1327089 1328204 + agmatine deiminase agmatine_aguA: agmatine deiminase~[E] COG2957 Peptidylarginine deiminase and related enzymes gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1237 CH63_1238 CH63_1238 CH63_1238 1328313 1329437 - twitching motility family protein pilT_fam: twitching motility family protein~[NU] COG2805 Tfp pilus assembly protein%2C pilus retraction ATPase PilT gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1238 CH63_1239 CH63_1239 CH63_1239 1329457 1330155 + hypothetical protein alanine racemase%2C N-terminal domain protein~[R] COG0325 Predicted enzyme with a TIM-barrel fold gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1239 CH63_124 CH63_124 CH63_124 117144 117383 - hypothetical protein conserved hypothetical protein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_124 CH63_1240 CH63_1240 proC proC 1330288 1331109 + pyrroline-5-carboxylate reductase proC: pyrroline-5-carboxylate reductase~[E] COG0345 Pyrroline-5-carboxylate reductase gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1240 CH63_1241 CH63_1241 CH63_1241 1331397 1331951 + YGGT family protein [S] COG0762 Predicted integral membrane protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1241 CH63_1242 CH63_1242 CH63_1242 1331948 1332238 + hypothetical protein conserved hypothetical protein~[S] COG1872 Uncharacterized conserved protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1242 CH63_1243 CH63_1243 rdgB rdgB 1332338 1332931 + non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family [F] COG0127 Xanthosine triphosphate pyrophosphatase gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1243 CH63_1244 CH63_1244 CH63_1244 1332924 1334054 + radical SAM superfamily protein [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1244 CH63_1245 CH63_1245 CH63_1245 1334244 1343576 - peptidase C80 family protein [Q] COG2931 RTX toxins and related Ca2+-binding proteins gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1245 CH63_1246 CH63_1246 CH63_1246 1344072 1344302 - hypothetical protein conserved hypothetical protein gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1246 CH63_1247 CH63_1247 CH63_1247 1344275 1344805 - hypothetical protein conserved hypothetical protein gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1247 CH63_1248 CH63_1248 glsA glsA 1344917 1345843 - glutaminase A gln_ase: glutaminase A~[E] COG2066 Glutaminase gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1248 CH63_1249 CH63_1249 CH63_1249 1345954 1346280 - hypothetical protein conserved hypothetical protein~[S] COG3171 Uncharacterized protein conserved in bacteria gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1249 CH63_125 CH63_125 CH63_125 117591 118580 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_125 CH63_1250 CH63_1250 trmB trmB 1346280 1346999 - tRNA (guanine-N(7)-)-methyltransferase [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1250 CH63_1251 CH63_1251 mutY mutY 1347334 1348452 + A/G-specific adenine glycosylase mutY: A/G-specific adenine glycosylase~[L] COG1194 A/G-specific DNA glycosylase gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1251 CH63_1252 CH63_1252 CH63_1252 1348630 1348902 + putative Fe(2+)-trafficking protein [CO] COG2924 Fe-S cluster protector protein gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1252 CH63_1253 CH63_1253 CH63_1253 1349085 1350161 + hypothetical protein conserved hypothetical protein~[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1253 CH63_1254 CH63_1254 CH63_1254 1350461 1351561 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1254 CH63_1255 CH63_1255 CH63_1255 1351554 1353698 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1255 CH63_1256 CH63_1256 CH63_1256 1353781 1354764 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1256 CH63_1257 CH63_1257 CH63_1257 1354797 1356296 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1257 CH63_1258 CH63_1258 CH63_1258 1356342 1357301 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1258 CH63_1259 CH63_1259 CH63_1259 1357857 1360019 - beta-eliminating lyase family protein [E] COG1982 Arginine/lysine/ornithine decarboxylases gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1259 CH63_126 CH63_126 CH63_126 118786 121233 - outer membrane usher family protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_126 CH63_1260 CH63_1260 CH63_1260 1360688 1360763 + tRNA-Phe tRNA gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1260 CH63_1261 CH63_1261 CH63_1261 1361016 1361324 - phage integrase family protein [L] COG0582 Integrase gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1261 CH63_1262 CH63_1262 CH63_1262 1361348 1361983 - hypothetical protein conserved hypothetical protein~[S] COG4253 Uncharacterized protein conserved in bacteria gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1262 CH63_1263 CH63_1263 CH63_1263 1362591 1362959 - putative transposase [L] COG1662 Transposase and inactivated derivatives%2C IS1 family gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1263 CH63_1264 CH63_1264 CH63_1264 1363013 1363288 - hypothetical protein insA N-terminal domain protein~[L] COG3677 Transposase and inactivated derivatives gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1264 CH63_1265 CH63_1265 CH63_1265 1363384 1364151 - hypothetical protein conserved hypothetical protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1265 CH63_1266 CH63_1266 CH63_1266 1364138 1366435 - peptidase M23 family protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1266 CH63_1267 CH63_1267 CH63_1267 1366451 1367086 - hypothetical protein conserved hypothetical protein~[S] COG4253 Uncharacterized protein conserved in bacteria gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1267 CH63_1268 CH63_1268 CH63_1268 1368007 1368282 - hypothetical protein insA N-terminal domain protein~[L] COG3677 Transposase and inactivated derivatives gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1268 CH63_1269 CH63_1269 CH63_1269 1369209 1371431 - putative hydroxyethylthiazole kinase gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1269 CH63_127 CH63_127 CH63_127 121404 122156 - hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_127 CH63_1270 CH63_1270 CH63_1270 1371446 1373794 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1270 CH63_1271 CH63_1271 clpV clpV 1373791 1376439 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1271 CH63_1272 CH63_1272 CH63_1272 1376857 1377348 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1272 CH63_1273 CH63_1273 CH63_1273 1377352 1379088 - ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1273 CH63_1274 CH63_1274 CH63_1274 1379088 1379774 - type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1274 CH63_1275 CH63_1275 CH63_1275 1379771 1381123 - hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1275 CH63_1276 CH63_1276 CH63_1276 1381135 1382674 - hypothetical protein pseudogene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1276 CH63_1278 CH63_1278 CH63_1278 1382723 1383223 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1278 CH63_1279 CH63_1279 CH63_1279 1384425 1384580 - hypothetical protein conserved hypothetical protein gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1279 CH63_128 CH63_128 CH63_128 122187 122744 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_128 CH63_1280 CH63_1280 CH63_1280 1384623 1384994 - putative membrane protein gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1280 CH63_1281 CH63_1281 CH63_1281 1385168 1385431 - hypothetical protein insA N-terminal domain protein~[L] COG3677 Transposase and inactivated derivatives gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1281 CH63_1282 CH63_1282 CH63_1282 1385499 1385825 - putative lipoprotein gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1282 CH63_1283 CH63_1283 CH63_1283 1386345 1386995 - CAAX protease self-immunity family protein [R] COG1266 Predicted metal-dependent membrane protease gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1283 CH63_1284 CH63_1284 CH63_1284 1387695 1387841 - hypothetical protein conserved hypothetical protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1284 CH63_1285 CH63_1285 CH63_1285 1388796 1389539 - bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1285 CH63_1286 CH63_1286 esaI esaI 1388165 1388815 + acyl-homoserine-lactone synthase [TQ] COG3916 N-acyl-L-homoserine lactone synthetase gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1286 CH63_1287 CH63_1287 CH63_1287 1390101 1391477 + prolyl oligopeptidase family protein [R] COG4099 Predicted peptidase gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1287 CH63_1288 CH63_1288 CH63_1288 1391854 1392687 + dioxygenase family protein [Q] COG3485 Protocatechuate 3%2C4-dioxygenase beta subunit gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1288 CH63_1289 CH63_1289 CH63_1289 1392977 1394200 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1289 CH63_129 CH63_129 CH63_129 122765 123295 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_129 CH63_1290 CH63_1290 CH63_1290 1394340 1394948 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1290 CH63_1291 CH63_1291 CH63_1291 1395041 1396111 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1291 CH63_1292 CH63_1292 CH63_1292 1396095 1397045 + acetyltransferase domain protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1292 CH63_1293 CH63_1293 CH63_1293 1397042 1398790 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1293 CH63_1294 CH63_1294 CH63_1294 1398787 1400115 + flavin-binding monooxygenase-like family protein [Q] COG3486 Lysine/ornithine N-monooxygenase gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1294 CH63_1295 CH63_1295 CH63_1295 1400187 1402367 + TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1295 CH63_1296 CH63_1296 gph gph 1402626 1404050 - sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein gph: sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein~[G] COG2211 Na+/melibiose symporter and related transporters gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1296 CH63_1297 CH63_1297 CH63_1297 1404322 1404837 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1297 CH63_1298 CH63_1298 CH63_1298 1405566 1406729 - glycosyl hydrolase 10 family protein gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1298 CH63_1299 CH63_1299 CH63_1299 1404891 1405676 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1299 CH63_13 CH63_13 eda eda 12588 13229 + 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein~[G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_13 CH63_130 CH63_130 CH63_130 123301 123855 - spore Coat Protein U domain protein [S] COG5430 Uncharacterized secreted protein gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_130 CH63_1300 CH63_1300 CH63_1300 1407023 1408042 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1300 CH63_1301 CH63_1301 CH63_1301 1408324 1409703 + transporter%2C divalent anion:Na+ symporter family protein dass: transporter%2C divalent anion:Na+ symporter family protein~[P] COG0471 Di- and tricarboxylate transporters gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1301 CH63_1302 CH63_1302 CH63_1302 1409883 1410296 - putative stress response protein gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1302 CH63_1303 CH63_1303 CH63_1303 1410840 1411082 - hypothetical protein conserved hypothetical protein gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1303 CH63_1304 CH63_1304 CH63_1304 1411373 1415425 - RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1304 CH63_1305 CH63_1305 CH63_1305 1415439 1416758 - tetratricopeptide repeat family protein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1305 CH63_1306 CH63_1306 CH63_1306 1416784 1419009 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1306 CH63_1307 CH63_1307 CH63_1307 1419595 1423365 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1307 CH63_1308 CH63_1308 CH63_1308 1424021 1425535 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1308 CH63_1309 CH63_1309 CH63_1309 1425615 1426010 - putative autotransporter secreted domain protein gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1309 CH63_131 CH63_131 CH63_131 124334 126984 - mce related family protein pseudogene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_131 CH63_1310 CH63_1310 CH63_1310 1426127 1427785 - hypothetical protein conserved hypothetical protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1310 CH63_1311 CH63_1311 CH63_1311 1428786 1430129 - transporter%2C gluconate:H+ symporter family protein gntP: transporter%2C gluconate:H+ symporter family protein~[GE] COG2610 H+/gluconate symporter and related permeases gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1311 CH63_1312 CH63_1312 CH63_1312 1431301 1431432 - hypothetical protein conserved hypothetical protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1312 CH63_1313 CH63_1313 CH63_1313 1431669 1432067 + hypothetical protein conserved hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1313 CH63_1314 CH63_1314 CH63_1314 1432503 1433378 + putative ornithine carbamoyltransferase gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1314 CH63_1315 CH63_1315 CH63_1315 1433701 1435458 - ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1315 CH63_1316 CH63_1316 CH63_1316 1435451 1437223 - ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1316 CH63_1317 CH63_1317 CH63_1317 1437223 1438527 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1317 CH63_1318 CH63_1318 CH63_1318 1438517 1439281 - phospholipase/Carboxylesterase family protein [Q] COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1318 CH63_1319 CH63_1319 CH63_1319 1439274 1440401 - thiazolinyl imide reductase family protein thiaz-red: thiazolinyl imide reductase family protein~[Q] COG4693 Oxidoreductase (NAD-binding)%2C involved in siderophore biosynthesis gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1319 CH63_1320 CH63_1320 CH63_1320 1440398 1441377 - saccharopine dehydrogenase family protein pseudogene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1320 CH63_1322 CH63_1322 CH63_1322 1441457 1445998 - amino acid adenylation domain protein AA-adenyl-dom: amino acid adenylation domain protein~[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1322 CH63_1323 CH63_1323 CH63_1323 1445938 1447230 - condensation domain protein [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1323 CH63_1324 CH63_1324 CH63_1324 1447243 1448893 - phosphopantetheine attachment site family protein%3Bamino acid adenylation domain protein pseudogene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1324 CH63_1326 CH63_1326 CH63_1326 1448890 1455396 - amino acid adenylation domain protein AA-adenyl-dom: amino acid adenylation domain protein~[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1326 CH63_1327 CH63_1327 CH63_1327 1455604 1456383 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1327 CH63_1328 CH63_1328 CH63_1328 1456383 1457405 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1328 CH63_1329 CH63_1329 CH63_1329 1457464 1458450 + dienelactone hydrolase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1329 CH63_133 CH63_133 CH63_133 126953 128200 - integral membrane%2C PqiA family protein pqiA_fam: integral membrane%2C PqiA family protein~[S] COG2995 Uncharacterized paraquat-inducible protein A gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_133 CH63_1330 CH63_1330 actP actP 1458524 1460179 - cation/acetate symporter ActP symport_actP: cation/acetate symporter ActP~[R] COG4147 Predicted symporter gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1330 CH63_1331 CH63_1331 CH63_1331 1460176 1460487 - hypothetical protein conserved hypothetical protein~[S] COG3162 Predicted membrane protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1331 CH63_1332 CH63_1332 acs acs 1460544 1462502 - acetate--CoA ligase ac_CoA_lig_AcsA: acetate--CoA ligase~[I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1332 CH63_1333 CH63_1333 CH63_1333 1463358 1464674 + dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[C] COG1301 Na+/H+-dicarboxylate symporters gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1333 CH63_1334 CH63_1334 CH63_1334 1464852 1465484 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1334 CH63_1335 CH63_1335 CH63_1335 1465497 1468316 - hpt domain protein [T] COG0642 Signal transduction histidine kinase gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1335 CH63_1336 CH63_1336 CH63_1336 1468560 1470059 + type III secretion outer membrane pore%2C YscC/HrcC family type_III_yscC: type III secretion outer membrane pore%2C YscC/HrcC family~[NU] COG1450 Type II secretory pathway%2C component PulD gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1336 CH63_1337 CH63_1337 CH63_1337 1470061 1471275 + type III secretion apparatus protein%2C YscD/HrpQ family type_III_yscD: type III secretion apparatus protein%2C YscD/HrpQ family gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1337 CH63_1338 CH63_1338 CH63_1338 1471294 1471515 + putative type III secretion apparatus gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1338 CH63_1339 CH63_1339 CH63_1339 1471689 1472309 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1339 CH63_134 CH63_134 CH63_134 128432 128929 + GAF domain protein [T] COG1956 GAF domain-containing protein gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_134 CH63_1340 CH63_1340 eprI eprI 1472319 1472534 + type III secretion apparatus needle protein III_needle: type III secretion apparatus needle protein gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1340 CH63_1341 CH63_1341 CH63_1341 1472531 1472779 + hypothetical protein conserved hypothetical protein gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1341 CH63_1342 CH63_1342 CH63_1342 1472877 1473128 + hypothetical protein yscI_hrpB_dom: type III secretion apparatus protein%2C YscI/HrpB%2C C-terminal domain gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1342 CH63_1343 CH63_1343 CH63_1343 1473125 1473856 + type III secretion apparatus lipoprotein%2C YscJ/HrcJ family III_secr_YscJ: type III secretion apparatus lipoprotein%2C YscJ/HrcJ family~[U] COG4669 Type III secretory pathway%2C lipoprotein EscJ gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1343 CH63_1344 CH63_1344 CH63_1344 1474031 1474624 + type III secretion system subunit gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1344 CH63_1345 CH63_1345 CH63_1345 1474621 1475268 + type III secretion apparatus protein%2C HrpE/YscL family hrpE_YscL_not: type III secretion apparatus protein%2C HrpE/YscL family gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1345 CH63_1346 CH63_1346 CH63_1346 1475261 1477309 + type III secretion%2C HrcV family protein hrcV: type III secretion%2C HrcV family protein~[U] COG4789 Type III secretory pathway%2C component EscV gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1346 CH63_1347 CH63_1347 CH63_1347 1477296 1478633 + ATPase%2C FliI/YscN family protein fliI_yscN: ATPase%2C FliI/YscN family protein~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1347 CH63_1348 CH63_1348 CH63_1348 1478630 1479031 + putative type III secretion system apparatus protein gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1348 CH63_1349 CH63_1349 CH63_1349 1479012 1479410 + hypothetical protein conserved hypothetical protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1349 CH63_135 CH63_135 proQ proQ 129025 129738 + proP effector [T] COG3109 Activator of osmoprotectant transporter ProP gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_135 CH63_1350 CH63_1350 epaO epaO 1479388 1480350 + type III secretion apparatus protein%2C YscQ/HrcQ family spaO_YscQ: type III secretion apparatus protein%2C YscQ/HrcQ family~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1350 CH63_1351 CH63_1351 epaP epaP 1480477 1481127 + type III secretion apparatus protein%2C YscR/HrcR family yscR: type III secretion apparatus protein%2C YscR/HrcR family~[U] COG4790 Type III secretory pathway%2C component EscR gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1351 CH63_1352 CH63_1352 CH63_1352 1481124 1481417 + type III secretion%2C HrpO family protein fliQ_rel_III: type III secretion%2C HrpO family protein~[U] COG4794 Type III secretory pathway%2C component EscS gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1352 CH63_1353 CH63_1353 epaR epaR 1481419 1482213 + type III secretion apparatus protein SpaR/YscT/HrcT fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT~[U] COG4791 Type III secretory pathway%2C component EscT gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1353 CH63_1354 CH63_1354 CH63_1354 1482203 1483270 + type III secretion%2C YscU/HrpY family protein flhB_rel_III: type III secretion%2C YscU/HrpY family protein~[U] COG4792 Type III secretory pathway%2C component EscU gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1354 CH63_1355 CH63_1355 CH63_1355 1483653 1484867 + sulfur transport family protein [R] COG2391 Predicted transporter component gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1355 CH63_1356 CH63_1356 CH63_1356 1484912 1485133 + hypothetical protein conserved hypothetical protein~[O] COG0425 Predicted redox protein%2C regulator of disulfide bond formation gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1356 CH63_1357 CH63_1357 CH63_1357 1485211 1486194 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1357 CH63_1358 CH63_1358 CH63_1358 1486364 1487650 + putative membrane protein [E] COG0814 Amino acid permeases gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1358 CH63_1359 CH63_1359 metC metC 1487696 1488877 + cystathionine beta-lyase cysta_beta_ly_B: cystathionine beta-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1359 CH63_136 CH63_136 prc prc 129758 131830 + tail-specific protease [M] COG0793 Periplasmic protease gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_136 CH63_1360 CH63_1360 hmuV hmuV 1489018 1489818 - hemin import ATP-binding protein HmuV [P] COG4559 ABC-type hemin transport system%2C ATPase component gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1360 CH63_1361 CH63_1361 CH63_1361 1489811 1490815 - fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1361 CH63_1362 CH63_1362 hmuT hmuT 1490812 1491651 - hemin-binding periplasmic protein hmuT [P] COG4558 ABC-type hemin transport system%2C periplasmic component gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1362 CH63_1363 CH63_1363 hemS hemS 1491648 1492685 - hemin transport protein hemS [P] COG3720 Putative heme degradation protein gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1363 CH63_1364 CH63_1364 CH63_1364 1492804 1494834 - TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1364 CH63_1365 CH63_1365 CH63_1365 1495249 1495899 - trkA-N domain protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1365 CH63_1366 CH63_1366 CH63_1366 1495933 1496442 - hypothetical protein conserved hypothetical protein~[P] COG3721 Putative heme iron utilization protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1366 CH63_1367 CH63_1367 hutW hutW 1496475 1497788 - putative heme utilization radical SAM enzyme HutW rSAM_HutW: putative heme utilization radical SAM enzyme HutW~[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1367 CH63_1368 CH63_1368 CH63_1368 1498129 1498929 - methylenetetrahydrofolate reductase family protein [E] COG0685 5%2C10-methylenetetrahydrofolate reductase gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1368 CH63_1369 CH63_1369 CH63_1369 1499244 1499732 - putative tellurite resistance protein gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1369 CH63_137 CH63_137 CH63_137 133121 133309 - hypothetical protein conserved hypothetical protein gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_137 CH63_1370 CH63_1370 CH63_1370 1500129 1501088 - C-C Bond Lyase of the TIM-Barrel fold family protein [G] COG2301 Citrate lyase beta subunit gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1370 CH63_1371 CH63_1371 CH63_1371 1501088 1502167 - phosphoribosyl transferase family protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1371 CH63_1372 CH63_1372 CH63_1372 1502160 1502972 - hypothetical protein conserved hypothetical protein gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1372 CH63_1373 CH63_1373 CH63_1373 1502965 1504098 - phosphoribosyl transferase domain protein gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1373 CH63_1374 CH63_1374 CH63_1374 1504113 1505174 - ATP-grasp in the biosynthetic pathway with Ter operon family protein gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1374 CH63_1375 CH63_1375 CH63_1375 1505450 1506043 + terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1375 CH63_1376 CH63_1376 CH63_1376 1506043 1507227 + terD domain protein [R] COG4110 Uncharacterized protein involved in stress response gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1376 CH63_1377 CH63_1377 CH63_1377 1507260 1507715 + tellurite resistance TerB family protein [P] COG3793 Tellurite resistance protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1377 CH63_1378 CH63_1378 CH63_1378 1507737 1508774 + integral membrane%2C TerC family protein R_switched_Alx: integral membrane%2C TerC family protein~[P] COG0861 Membrane protein TerC%2C possibly involved in tellurium resistance gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1378 CH63_1379 CH63_1379 CH63_1379 1508838 1509416 + terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1379 CH63_138 CH63_138 CH63_138 132304 133185 + peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_138 CH63_1380 CH63_1380 CH63_1380 1509600 1510175 + terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1380 CH63_1381 CH63_1381 CH63_1381 1510888 1511526 + hypothetical protein conserved hypothetical protein gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1381 CH63_1382 CH63_1382 CH63_1382 1511777 1514155 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1382 CH63_1383 CH63_1383 CH63_1383 1514227 1514970 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1383 CH63_1384 CH63_1384 CH63_1384 1514981 1515235 + putative membrane protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1384 CH63_1385 CH63_1385 CH63_1385 1516428 1517747 + hypothetical protein conserved hypothetical protein gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1385 CH63_1386 CH63_1386 CH63_1386 1518756 1520813 + fibronectin type III domain protein [C] COG0277 FAD/FMN-containing dehydrogenases gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1386 CH63_1387 CH63_1387 CH63_1387 1521157 1524960 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1387 CH63_1388 CH63_1388 CH63_1388 1525792 1526316 + chorismate lyase family protein [H] COG3161 4-hydroxybenzoate synthetase (chorismate lyase) gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1388 CH63_1389 CH63_1389 ubiA ubiA 1526482 1527348 + 4-hydroxybenzoate polyprenyl transferase ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase~[H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1389 CH63_139 CH63_139 CH63_139 133843 134385 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_139 CH63_1390 CH63_1390 plsB plsB 1527529 1530006 - glycerol-3-phosphate O-acyltransferase plsB: glycerol-3-phosphate O-acyltransferase~[I] COG2937 Glycerol-3-phosphate O-acyltransferase gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1390 CH63_1391 CH63_1391 dgkA dgkA 1530134 1530505 + diacylglycerol kinase [M] COG0818 Diacylglycerol kinase gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1391 CH63_1392 CH63_1392 lexA lexA 1530630 1531238 + repressor LexA lexA: repressor LexA~[KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1392 CH63_1393 CH63_1393 CH63_1393 1531405 1531914 - ferric uptake regulator family protein [P] COG0735 Fe2+/Zn2+ uptake regulation proteins gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1393 CH63_1394 CH63_1394 dusA dusA 1532169 1533206 + tRNA dihydrouridine synthase A family protein yjbN: tRNA dihydrouridine synthase A family protein~[J] COG0042 tRNA-dihydrouridine synthase gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1394 CH63_1395 CH63_1395 pspG pspG 1533722 1533940 + phage shock protein G phageshock_pspG: phage shock protein G gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1395 CH63_1396 CH63_1396 CH63_1396 1534285 1535268 - zinc-binding dehydrogenase family protein [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1396 CH63_1397 CH63_1397 dnaB dnaB 1535600 1537006 + replicative DNA helicase dnaB: replicative DNA helicase~[L] COG0305 Replicative DNA helicase gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1397 CH63_1398 CH63_1398 alr alr 1537103 1538182 + alanine racemase alr: alanine racemase~[M] COG0787 Alanine racemase gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1398 CH63_1399 CH63_1399 CH63_1399 1538368 1539561 + aminotransferase class I and II family protein [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1399 CH63_14 CH63_14 CH63_14 13944 14387 + small Multidrug Resistance family protein [P] COG2076 Membrane transporters of cations and cationic drugs gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_14 CH63_140 CH63_140 CH63_140 134538 135317 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_140 CH63_1400 CH63_1400 CH63_1400 1540088 1540447 + hypothetical protein conserved hypothetical protein~[S] COG2315 Uncharacterized protein conserved in bacteria gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1400 CH63_1401 CH63_1401 uvrA uvrA 1540540 1543383 - excinuclease ABC subunit A uvra: excinuclease ABC subunit A~[L] COG0178 Excinuclease ATPase subunit gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1401 CH63_1402 CH63_1402 ssb ssb 1543841 1544389 + single-stranded DNA-binding protein [L] COG0629 Single-stranded DNA-binding protein gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1402 CH63_1403 CH63_1403 rhaM rhaM 1544636 1544950 - L-rhamnose mutarotase yiiL_rotase: L-rhamnose mutarotase~[S] COG3254 Uncharacterized conserved protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1403 CH63_1404 CH63_1404 fucO fucO 1544964 1546112 - lactaldehyde reductase lactal_redase: lactaldehyde reductase~[C] COG1454 Alcohol dehydrogenase%2C class IV gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1404 CH63_1405 CH63_1405 rhaD rhaD 1546179 1547003 - rhamnulose-1-phosphate aldolase rhamnu_1P_ald: rhamnulose-1-phosphate aldolase~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1405 CH63_1406 CH63_1406 rhaA rhaA 1547016 1548272 - L-rhamnose isomerase rhaA: L-rhamnose isomerase~[G] COG4806 L-rhamnose isomerase gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1406 CH63_1407 CH63_1407 rhaB rhaB 1548269 1549687 - rhamnulokinase rhamnulo_kin: rhamnulokinase~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1407 CH63_1408 CH63_1408 CH63_1408 1549725 1549931 + putative phosphoribosylaminoimidazol (AIR) synthetase gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1408 CH63_1409 CH63_1409 CH63_1409 1549928 1550071 + hypothetical protein conserved hypothetical protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1409 CH63_141 CH63_141 CH63_141 135399 138011 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_141 CH63_1410 CH63_1410 CH63_1410 1550153 1550974 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1410 CH63_1411 CH63_1411 CH63_1411 1551107 1551979 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1411 CH63_1412 CH63_1412 CH63_1412 1552128 1553162 - RhaT L-rhamnose-proton symporter family protein rhaT: RhaT L-rhamnose-proton symporter family protein~[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1412 CH63_1413 CH63_1413 CH63_1413 1553319 1553582 + hypothetical protein conserved hypothetical protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1413 CH63_1414 CH63_1414 subB subB 1554018 1554443 - subtilase cytotoxin%2C subunit B gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1414 CH63_1415 CH63_1415 CH63_1415 1554870 1557425 + viral enhancin family protein gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1415 CH63_1416 CH63_1416 CH63_1416 1557859 1557934 - tRNA-Phe tRNA gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1416 CH63_1417 CH63_1417 CH63_1417 1558079 1558654 - bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1417 CH63_1418 CH63_1418 CH63_1418 1559074 1561089 + glutamate synthase%2C small subunit domain protein gltD_gamma_fam: glutamate synthase%2C small subunit domain protein~[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1418 CH63_1419 CH63_1419 CH63_1419 1561112 1561681 + 4Fe-4S dicluster domain protein [C] COG1142 Fe-S-cluster-containing hydrogenase components 2 gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1419 CH63_142 CH63_142 CH63_142 138008 139171 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_142 CH63_1420 CH63_1420 CH63_1420 1561691 1562926 + molybdopterin oxidoreductase Fe4S4 domain protein [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1420 CH63_1421 CH63_1421 CH63_1421 1562932 1563837 + molybdopterin oxidoreductase family protein [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1421 CH63_1422 CH63_1422 CH63_1422 1563899 1565686 - cytochrome C biogenesis transmembrane region family protein [OC] COG4232 Thiol:disulfide interchange protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1422 CH63_1423 CH63_1423 cutA cutA 1565662 1565985 - divalent-cation tolerance protein CutA [P] COG1324 Uncharacterized protein involved in tolerance to divalent cations gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1423 CH63_1424 CH63_1424 dcuA dcuA 1566206 1567507 - anaerobic C4-dicarboxylate transporter dcuA [R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1424 CH63_1425 CH63_1425 aspA aspA 1567627 1569063 - aspartate ammonia-lyase aspA: aspartate ammonia-lyase~[E] COG1027 Aspartate ammonia-lyase gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1425 CH63_1426 CH63_1426 CH63_1426 1569511 1570089 + fxsA cytoplasmic membrane family protein [R] COG3030 Protein affecting phage T7 exclusion by the F plasmid gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1426 CH63_1427 CH63_1427 groS groS 1570344 1570637 + 10 kDa chaperonin [O] COG0234 Co-chaperonin GroES (HSP10) gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1427 CH63_1428 CH63_1428 groL groL 1570684 1572330 + chaperonin GroL groEL: chaperonin GroL~[O] COG0459 Chaperonin GroEL (HSP60 family) gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1428 CH63_1429 CH63_1429 CH63_1429 1573077 1573352 + hypothetical protein conserved hypothetical protein gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1429 CH63_143 CH63_143 CH63_143 139168 139971 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_143 CH63_1430 CH63_1430 epmB epmB 1573637 1574620 - EF-P beta-lysylation protein EpmB EFP_modif_epmB: EF-P beta-lysylation protein EpmB~[E] COG1509 Lysine 2%2C3-aminomutase gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1430 CH63_1431 CH63_1431 efp efp 1574701 1575267 + translation elongation factor P efp: translation elongation factor P~[J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1431 CH63_1432 CH63_1432 sugE sugE 1575514 1575828 + quaternary ammonium compound-resistance protein sugE [P] COG2076 Membrane transporters of cations and cationic drugs gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1432 CH63_1433 CH63_1433 frdD frdD 1575993 1576349 - fumarate reductase subunit D [C] COG3080 Fumarate reductase subunit D gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1433 CH63_1434 CH63_1434 frdC frdC 1576366 1576758 - fumarate reductase subunit C [C] COG3029 Fumarate reductase subunit C gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1434 CH63_1435 CH63_1435 CH63_1435 1576775 1577509 - succinate dehydrogenase and fumarate reductase iron-sulfur family protein dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein~[C] COG0479 Succinate dehydrogenase/fumarate reductase%2C Fe-S protein subunit gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1435 CH63_1436 CH63_1436 frdA frdA 1577502 1579325 - fumarate reductase%2C flavoprotein subunit fum_red_Fp: fumarate reductase%2C flavoprotein subunit~[C] COG1053 Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1436 CH63_1437 CH63_1437 CH63_1437 1579783 1580760 + EF-P lysine aminoacylase GenX genX: EF-P lysine aminoacylase GenX~[J] COG2269 Truncated%2C possibly inactive%2C lysyl-tRNA synthetase (class II) gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1437 CH63_1438 CH63_1438 CH63_1438 1580881 1584222 - mechanosensitive ion channel family protein [M] COG3264 Small-conductance mechanosensitive channel gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1438 CH63_1439 CH63_1439 psd psd 1584264 1585145 - phosphatidylserine decarboxylase PS_decarb: phosphatidylserine decarboxylase~[I] COG0688 Phosphatidylserine decarboxylase gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1439 CH63_144 CH63_144 CH63_144 140025 141392 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_144 CH63_1440 CH63_1440 rsgA rsgA 1585347 1586399 - ribosome small subunit-dependent GTPase A [R] COG1162 Predicted GTPases gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1440 CH63_1441 CH63_1441 orn orn 1586599 1587144 + oligoribonuclease [A] COG1949 Oligoribonuclease (3'->5' exoribonuclease) gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1441 CH63_1442 CH63_1442 CH63_1442 1587702 1587777 + tRNA-Gly tRNA gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1442 CH63_1444 CH63_1444 CH63_1444 1587869 1587944 + tRNA-Gly tRNA gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1444 CH63_1445 CH63_1445 queG queG 1588256 1589395 - epoxyqueuosine reductase [C] COG1600 Uncharacterized Fe-S protein gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1445 CH63_1446 CH63_1446 CH63_1446 1589490 1591004 + hypothetical protein conserved hypothetical protein~[G] COG0063 Predicted sugar kinase gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1446 CH63_1447 CH63_1447 CH63_1447 1591015 1591485 + tRNA threonylcarbamoyl adenosine modification protein YjeE T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE~[R] COG0802 Predicted ATPase or kinase gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1447 CH63_1448 CH63_1448 CH63_1448 1591493 1593406 + N-acetylmuramoyl-L-alanine amidase family protein [M] COG0860 N-acetylmuramoyl-L-alanine amidase gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1448 CH63_1449 CH63_1449 mutL mutL 1593422 1595335 + DNA mismatch repair MutL family protein mutl: DNA mismatch repair MutL family protein~[L] COG0323 DNA mismatch repair enzyme (predicted ATPase) gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1449 CH63_145 CH63_145 ogl ogl 141719 142885 + oligogalacturonate lyase [U] COG0823 Periplasmic component of the Tol biopolymer transport system gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_145 CH63_1450 CH63_1450 miaA miaA 1595328 1596269 + tRNA dimethylallyltransferase miaA: tRNA dimethylallyltransferase~[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1450 CH63_1451 CH63_1451 hfq hfq 1596385 1596690 + RNA chaperone Hfq hfq: RNA chaperone Hfq~[R] COG1923 Uncharacterized host factor I protein gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1451 CH63_1452 CH63_1452 hflX hflX 1596789 1598075 + GTP-binding protein HflX GTP_HflX: GTP-binding protein HflX~[R] COG2262 GTPases gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1452 CH63_1453 CH63_1453 hflK hflK 1598316 1599575 + HflK protein hflK: HflK protein~[O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1453 CH63_1454 CH63_1454 hflC hflC 1599579 1600583 + HflC protein hflC: HflC protein~[O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1454 CH63_1455 CH63_1455 CH63_1455 1600707 1600955 + hypothetical protein conserved hypothetical protein~[S] COG3242 Uncharacterized protein conserved in bacteria gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1455 CH63_1456 CH63_1456 purA purA 1601055 1602353 + adenylosuccinate synthase purA: adenylosuccinate synthase~[F] COG0104 Adenylosuccinate synthase gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1456 CH63_1457 CH63_1457 nsrR nsrR 1602722 1603147 + HTH-type transcriptional repressor nsrR [K] COG1959 Predicted transcriptional regulator gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1457 CH63_1458 CH63_1458 rnr rnr 1603388 1605922 + ribonuclease R RNase_R: ribonuclease R~[K] COG0557 Exoribonuclease R gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1458 CH63_1459 CH63_1459 CH63_1459 1606041 1606781 + RNA 2'-O ribose methyltransferase substrate binding family protein [J] COG0566 rRNA methylases gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1459 CH63_146 CH63_146 kdgR kdgR 143072 143863 + pectin degradation repressor protein kdgR [K] COG1414 Transcriptional regulator gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_146 CH63_1460 CH63_1460 CH63_1460 1607201 1608832 + hypothetical protein acyl-CoA dehydrogenase%2C C-terminal domain protein~[I] COG1960 Acyl-CoA dehydrogenases gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1460 CH63_1461 CH63_1461 CH63_1461 1608904 1609215 - hypothetical protein conserved hypothetical protein gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1461 CH63_1462 CH63_1462 CH63_1462 1609555 1610142 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1462 CH63_1463 CH63_1463 CH63_1463 1610121 1610333 - putative transposition helper domain protein [L] COG1484 DNA replication protein gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1463 CH63_1464 CH63_1464 CH63_1464 1610333 1611355 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1464 CH63_1465 CH63_1465 CH63_1465 1611412 1612113 + dienelactone hydrolase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1465 CH63_1466 CH63_1466 CH63_1466 1612188 1612466 + hypothetical protein conserved hypothetical protein gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1466 CH63_1467 CH63_1467 rpsF rpsF 1612480 1612872 + ribosomal protein S6 S6: ribosomal protein S6~[J] COG0360 Ribosomal protein S6 gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1467 CH63_1468 CH63_1468 rpsR rpsR 1613203 1613430 + ribosomal protein S18 S18: ribosomal protein S18~[J] COG0238 Ribosomal protein S18 gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1468 CH63_1469 CH63_1469 rplI rplI 1613470 1613922 + ribosomal protein L9 L9: ribosomal protein L9~[J] COG0359 Ribosomal protein L9 gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1469 CH63_147 CH63_147 CH63_147 144248 145099 + N-acetylmuramoyl-L-alanine amidase family protein [V] COG3023 Negative regulator of beta-lactamase expression gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_147 CH63_1470 CH63_1470 CH63_1470 1614118 1614576 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1470 CH63_1471 CH63_1471 CH63_1471 1614698 1615153 - hypothetical protein conserved hypothetical protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1471 CH63_1472 CH63_1472 CH63_1472 1615293 1616033 - hypothetical protein opacity-associated A N-terminal motif family protein~[M] COG3061 Cell envelope opacity-associated protein A gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1472 CH63_1473 CH63_1473 CH63_1473 1616376 1616996 + domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1473 CH63_1474 CH63_1474 ric ric 1617094 1617759 - iron-sulfur cluster repair di-iron protein feS_repair_RIC: iron-sulfur cluster repair di-iron protein~[D] COG2846 Regulator of cell morphogenesis and NO signaling gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1474 CH63_1475 CH63_1475 cpdB cpdB 1617914 1619872 - 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase cycNucDiestase: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1475 CH63_1476 CH63_1476 cysQ cysQ 1620319 1621059 + 3'(2')%2C5'-bisphosphate nucleotidase bisphos_cysQ: 3'(2')%2C5'-bisphosphate nucleotidase~[P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1476 CH63_1477 CH63_1477 CH63_1477 1621062 1621625 - hypothetical protein conserved hypothetical protein~[R] COG3054 Predicted transcriptional regulator gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1477 CH63_1478 CH63_1478 CH63_1478 1621961 1622173 + hypothetical protein conserved hypothetical protein gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1478 CH63_1479 CH63_1479 CH63_1479 1622281 1623612 - CBS domain protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1479 CH63_148 CH63_148 CH63_148 145314 146705 - dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[R] COG1823 Predicted Na+/dicarboxylate symporter gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_148 CH63_1480 CH63_1480 msrA msrA 1623890 1624528 - peptide-methionine (S)-S-oxide reductase msrA: peptide-methionine (S)-S-oxide reductase~[O] COG0225 Peptide methionine sulfoxide reductase gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1480 CH63_1481 CH63_1481 CH63_1481 1624803 1626539 + surface antigen variable number repeat family protein [M] COG0729 Outer membrane protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1481 CH63_1482 CH63_1482 CH63_1482 1626536 1630452 + hypothetical protein pseudogene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1482 CH63_1484 CH63_1484 CH63_1484 1630455 1630811 + AIG2-like family protein [S] COG2105 Uncharacterized conserved protein gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1484 CH63_1485 CH63_1485 ppa ppa 1630929 1631456 - inorganic pyrophosphatase [C] COG0221 Inorganic pyrophosphatase gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1485 CH63_1486 CH63_1486 CH63_1486 1631656 1632669 - fructose-1-6-bisphosphatase family protein [G] COG0158 Fructose-1%2C6-bisphosphatase gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1486 CH63_1487 CH63_1487 mpl mpl 1632840 1634222 + L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase~mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase~[M] COG0773 UDP-N-acetylmuramate-alanine ligase gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1487 CH63_1488 CH63_1488 CH63_1488 1634518 1634781 - hypothetical protein conserved hypothetical protein gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1488 CH63_1489 CH63_1489 argR argR 1635170 1635640 - arginine repressor argR_whole: arginine repressor~[K] COG1438 Arginine repressor gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1489 CH63_149 CH63_149 CH63_149 146909 147457 - hypothetical protein conserved hypothetical protein~[R] COG1988 Predicted membrane-bound metal-dependent hydrolases gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_149 CH63_1490 CH63_1490 mdh mdh 1636104 1637042 + malate dehydrogenase%2C NAD-dependent MDH_euk_gproteo: malate dehydrogenase%2C NAD-dependent~[C] COG0039 Malate/lactate dehydrogenases gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1490 CH63_1491 CH63_1491 CH63_1491 1637476 1637751 - winged helix-turn-helix DNA-binding family protein [K] COG3423 Predicted transcriptional regulator gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1491 CH63_1492 CH63_1492 CH63_1492 1637934 1638281 + mu DNA-binding domain protein [K] COG2932 Predicted transcriptional regulator gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1492 CH63_1493 CH63_1493 CH63_1493 1638378 1639349 - polyprenyl synthetase family protein [H] COG0142 Geranylgeranyl pyrophosphate synthase gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1493 CH63_1494 CH63_1494 rplU rplU 1639609 1639920 + ribosomal protein L21 L21: ribosomal protein L21~[J] COG0261 Ribosomal protein L21 gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1494 CH63_1495 CH63_1495 rpmA rpmA 1639940 1640197 + ribosomal protein L27 L27: ribosomal protein L27~[J] COG0211 Ribosomal protein L27 gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1495 CH63_1496 CH63_1496 CH63_1496 1640285 1641271 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1496 CH63_1497 CH63_1497 cgtA cgtA 1641272 1642444 + Obg family GTPase CgtA obg_CgtA: Obg family GTPase CgtA~[R] COG0536 Predicted GTPase gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1497 CH63_1498 CH63_1498 CH63_1498 1642539 1643606 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1498 CH63_1499 CH63_1499 CH63_1499 1643603 1644265 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1499 CH63_15 CH63_15 CH63_15 14374 14703 + small Multidrug Resistance family protein [P] COG2076 Membrane transporters of cations and cationic drugs gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_15 CH63_150 CH63_150 kdgM kdgM 147937 148647 - oligogalacturonate-specific porin kdgM gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_150 CH63_1500 CH63_1500 dacB dacB 1644271 1645719 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1500 CH63_1501 CH63_1501 greA greA 1645976 1646452 + transcription elongation factor greA [K] COG0782 Transcription elongation factor gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1501 CH63_1502 CH63_1502 yhbY yhbY 1646580 1646873 - RNA-binding protein YhbY [J] COG1534 Predicted RNA-binding protein containing KH domain%2C possibly ribosomal protein gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1502 CH63_1503 CH63_1503 rrmJ rrmJ 1647020 1647649 + ribosomal RNA large subunit methyltransferase J rrmJ: ribosomal RNA large subunit methyltransferase J~[J] COG0293 23S rRNA methylase gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1503 CH63_1504 CH63_1504 ftsH ftsH 1647706 1649640 + ATP-dependent zinc metalloprotease FtsH [O] COG0465 ATP-dependent Zn proteases gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1504 CH63_1505 CH63_1505 folP folP 1649760 1650593 + dihydropteroate synthase DHPS: dihydropteroate synthase~[H] COG0294 Dihydropteroate synthase and related enzymes gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1505 CH63_1506 CH63_1506 glmM glmM 1650603 1651943 + phosphoglucosamine mutase glmM: phosphoglucosamine mutase~[G] COG1109 Phosphomannomutase gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1506 CH63_1507 CH63_1507 secG secG 1652166 1652501 + preprotein translocase%2C SecG subunit secG: preprotein translocase%2C SecG subunit~[U] COG1314 Preprotein translocase subunit SecG gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1507 CH63_1508 CH63_1508 CH63_1508 1652594 1652680 + tRNA-Leu tRNA gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1508 CH63_1509 CH63_1509 CH63_1509 1652741 1652817 + tRNA-Met tRNA gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1509 CH63_151 CH63_151 CH63_151 148945 150237 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_151 CH63_1510 CH63_1510 rimP rimP 1653033 1653485 + ribosome maturation factor rimP [S] COG0779 Uncharacterized protein conserved in bacteria gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1510 CH63_1511 CH63_1511 nusA nusA 1653507 1654994 + transcription elongation protein nusA [K] COG0195 Transcription elongation factor gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1511 CH63_1512 CH63_1512 infB infB 1655019 1657697 + translation initiation factor IF-2 IF-2: translation initiation factor IF-2~[J] COG0532 Translation initiation factor 2 (IF-2%3B GTPase) gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1512 CH63_1513 CH63_1513 rbfA rbfA 1657763 1658173 + ribosome-binding factor A rbfA: ribosome-binding factor A~[J] COG0858 Ribosome-binding factor A gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1513 CH63_1514 CH63_1514 truB truB 1658173 1659147 + tRNA pseudouridine(55) synthase truB: tRNA pseudouridine(55) synthase~[J] COG0130 Pseudouridine synthase gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1514 CH63_1515 CH63_1515 rpsO rpsO 1659269 1659538 + ribosomal protein S15 S15_bact: ribosomal protein S15~[J] COG0184 Ribosomal protein S15P/S13E gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1515 CH63_1516 CH63_1516 CH63_1516 1659625 1660140 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1516 CH63_1517 CH63_1517 CH63_1517 1660194 1660979 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1517 CH63_1518 CH63_1518 CH63_1518 1661175 1663541 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1518 CH63_1519 CH63_1519 CH63_1519 1663545 1663742 - hypothetical protein conserved hypothetical protein gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1519 CH63_152 CH63_152 CH63_152 150253 151380 - ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_152 CH63_1520 CH63_1520 CH63_1520 1664181 1665458 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1520 CH63_1521 CH63_1521 CH63_1521 1665471 1668590 + RND transporter%2C hydrophobe/amphiphile efflux-1 family protein 2A0602: RND transporter%2C hydrophobe/amphiphile efflux-1 family protein~[V] COG0841 Cation/multidrug efflux pump gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1521 CH63_1522 CH63_1522 CH63_1522 1668725 1670215 - hypothetical protein shET2 enterotoxin%2C N-terminal region family protein~[R] COG0666 FOG: Ankyrin repeat gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1522 CH63_1523 CH63_1523 CH63_1523 1670493 1671080 + hypothetical protein conserved hypothetical protein gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1523 CH63_1524 CH63_1524 CH63_1524 1671934 1683051 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1524 CH63_1525 CH63_1525 CH63_1525 1683154 1685034 - leucine rich repeat family protein [S] COG4886 Leucine-rich repeat (LRR) protein gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1525 CH63_1526 CH63_1526 CH63_1526 1685597 1686472 - leucine rich repeat family protein [S] COG4886 Leucine-rich repeat (LRR) protein gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1526 CH63_1527 CH63_1527 CH63_1527 1686681 1688498 - hypothetical protein C-terminal novel E3 ligase%2C LRR-interacting family protein~[S] COG4886 Leucine-rich repeat (LRR) protein gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1527 CH63_1528 CH63_1528 CH63_1528 1689217 1690773 + abgT transporter family protein [H] COG2978 Putative p-aminobenzoyl-glutamate transporter gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1528 CH63_1529 CH63_1529 pepT pepT 1690851 1692083 + peptidase T peptidase-T: peptidase T~[E] COG2195 Di- and tripeptidases gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1529 CH63_153 CH63_153 CH63_153 151394 152314 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_153 CH63_1530 CH63_1530 CH63_1530 1692471 1694543 + tonB dependent receptor family protein [P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1530 CH63_1531 CH63_1531 CH63_1531 1694694 1698107 + AMP-binding enzyme family protein [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1531 CH63_1532 CH63_1532 CH63_1532 1698121 1699143 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1532 CH63_1533 CH63_1533 CH63_1533 1699143 1699922 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1533 CH63_1534 CH63_1534 CH63_1534 1699932 1700192 - hypothetical protein conserved hypothetical protein gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1534 CH63_1535 CH63_1535 CH63_1535 1700594 1701346 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1535 CH63_1536 CH63_1536 CH63_1536 1701427 1701693 - transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1536 CH63_1537 CH63_1537 CH63_1537 1702160 1702272 - 5S ribosomal RNA rRNA gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1537 CH63_1538 CH63_1538 CH63_1538 1702386 1705288 - 23S ribosomal RNA rRNA gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1538 CH63_1539 CH63_1539 CH63_1539 1705510 1705585 - tRNA-Ala tRNA gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1539 CH63_154 CH63_154 CH63_154 152307 153197 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_154 CH63_1540 CH63_1540 CH63_1540 1705637 1705713 - tRNA-Ile tRNA gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1540 CH63_1541 CH63_1541 CH63_1541 1705822 1707350 - 16S ribosomal RNA rRNA gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1541 CH63_1542 CH63_1542 CH63_1542 1707487 1707606 - hypothetical protein conserved hypothetical protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1542 CH63_1543 CH63_1543 purH purH 1708017 1709606 + phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~[F] COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1543 CH63_1544 CH63_1544 purD purD 1709666 1710952 + phosphoribosylamine--glycine ligase [F] COG0151 Phosphoribosylamine-glycine ligase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1544 CH63_1545 CH63_1545 CH63_1545 1711100 1711753 - hypothetical protein conserved hypothetical protein gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1545 CH63_1546 CH63_1546 hupA hupA 1711803 1712078 - DNA-binding protein HU-alpha [L] COG0776 Bacterial nucleoid DNA-binding protein gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1546 CH63_1547 CH63_1547 CH63_1547 1712267 1712857 - hypothetical protein conserved hypothetical protein~[S] COG3068 Uncharacterized protein conserved in bacteria gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1547 CH63_1548 CH63_1548 nfi nfi 1712903 1713607 - endonuclease V [L] COG1515 Deoxyinosine 3'endonuclease (endonuclease V) gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1548 CH63_1549 CH63_1549 hemE hemE 1713673 1714740 - uroporphyrinogen decarboxylase hemE: uroporphyrinogen decarboxylase~[H] COG0407 Uroporphyrinogen-III decarboxylase gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1549 CH63_155 CH63_155 CH63_155 153238 154905 - periplasmic pectate lyase family protein gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_155 CH63_1550 CH63_1550 CH63_1550 1714859 1715644 - hypothetical protein gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1550 CH63_1551 CH63_1551 CH63_1551 1715737 1716519 - NADH pyrophosphatase zinc ribbon domain protein [L] COG2816 NTP pyrophosphohydrolases containing a Zn-finger%2C probably nucleic-acid-binding gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1551 CH63_1552 CH63_1552 CH63_1552 1716616 1717125 + regulator of RNA polymerase sigma(70) subunit%2C Rsd/AlgQ family protein [K] COG3160 Regulator of sigma D gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1552 CH63_1553 CH63_1553 thiC thiC 1717501 1719546 + phosphomethylpyrimidine synthase thiC: phosphomethylpyrimidine synthase~[H] COG0422 Thiamine biosynthesis protein ThiC gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1553 CH63_1554 CH63_1554 thiE thiE 1719533 1720207 + thiamine-phosphate diphosphorylase thiE: thiamine-phosphate diphosphorylase~[H] COG0352 Thiamine monophosphate synthase gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1554 CH63_1555 CH63_1555 CH63_1555 1720197 1720994 + thiF family protein [H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1555 CH63_1556 CH63_1556 thiS thiS 1720991 1721206 + thiamine biosynthesis protein ThiS thiS: thiamine biosynthesis protein ThiS~[H] COG2104 Sulfur transfer protein involved in thiamine biosynthesis gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1556 CH63_1557 CH63_1557 CH63_1557 1721208 1722023 + histidine biosynthesis family protein [H] COG2022 Uncharacterized enzyme of thiazole biosynthesis gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1557 CH63_1558 CH63_1558 thiH thiH 1722016 1723146 + thiazole biosynthesis protein ThiH thiH: thiazole biosynthesis protein ThiH~[HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1558 CH63_1559 CH63_1559 CH63_1559 1723578 1724036 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1559 CH63_156 CH63_156 kduD kduD 155241 156002 - 2-deoxy-D-gluconate 3-dehydrogenase kduD: 2-deoxy-D-gluconate 3-dehydrogenase~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_156 CH63_1560 CH63_1560 rpoC rpoC 1724163 1728383 - DNA-directed RNA polymerase%2C beta' subunit rpoC_TIGR: DNA-directed RNA polymerase%2C beta' subunit~[K] COG0086 DNA-directed RNA polymerase%2C beta' subunit/160 kD subunit gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1560 CH63_1561 CH63_1561 rpoB rpoB 1728512 1732540 - DNA-directed RNA polymerase%2C beta subunit rpoB: DNA-directed RNA polymerase%2C beta subunit~[K] COG0085 DNA-directed RNA polymerase%2C beta subunit/140 kD subunit gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1561 CH63_1562 CH63_1562 CH63_1562 1732600 1732737 + hypothetical protein conserved hypothetical protein gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1562 CH63_1563 CH63_1563 rplL rplL 1732883 1733251 - ribosomal protein L7/L12 L12: ribosomal protein L7/L12~[J] COG0222 Ribosomal protein L7/L12 gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1563 CH63_1564 CH63_1564 rplJ rplJ 1733318 1733815 - 50S ribosomal protein L10 [J] COG0244 Ribosomal protein L10 gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1564 CH63_1565 CH63_1565 rplA rplA 1734180 1734884 - ribosomal protein L1 rplA_bact: ribosomal protein L1~[J] COG0081 Ribosomal protein L1 gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1565 CH63_1566 CH63_1566 rplK rplK 1734888 1735316 - ribosomal protein L11 L11_bact: ribosomal protein L11~[J] COG0080 Ribosomal protein L11 gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1566 CH63_1567 CH63_1567 nusG nusG 1735507 1736052 - transcription termination/antitermination factor NusG nusG: transcription termination/antitermination factor NusG~[K] COG0250 Transcription antiterminator gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1567 CH63_1568 CH63_1568 secE secE 1736054 1736437 - preprotein translocase%2C SecE subunit secE_bact: preprotein translocase%2C SecE subunit~[U] COG0690 Preprotein translocase subunit SecE gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1568 CH63_1569 CH63_1569 tuf tuf 1736688 1737872 - translation elongation factor Tu EF-Tu: translation elongation factor Tu~[J] COG0050 GTPases - translation elongation factors gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1569 CH63_157 CH63_157 CH63_157 156094 156930 - kduI/IolB family protein [G] COG3717 5-keto 4-deoxyuronate isomerase gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_157 CH63_1570 CH63_1570 CH63_1570 1737981 1738056 - tRNA-Thr tRNA gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1570 CH63_1571 CH63_1571 CH63_1571 1738063 1738137 - tRNA-Gly tRNA gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1571 CH63_1572 CH63_1572 CH63_1572 1738287 1738371 - tRNA-Tyr tRNA gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1572 CH63_1573 CH63_1573 CH63_1573 1738390 1738465 - tRNA-Thr tRNA gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1573 CH63_1574 CH63_1574 CH63_1574 1738929 1739708 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1574 CH63_1575 CH63_1575 CH63_1575 1739708 1740730 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1575 CH63_1576 CH63_1576 CH63_1576 1740820 1741371 + acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1576 CH63_1577 CH63_1577 coaA coaA 1741582 1742532 + pantothenate kinase panK_bact: pantothenate kinase~[H] COG1072 Panthothenate kinase gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1577 CH63_1578 CH63_1578 CH63_1578 1742567 1743526 - biotin operon repressor birA_repr_reg: biotin operon repressor~[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1578 CH63_1579 CH63_1579 murB murB 1743523 1744560 - UDP-N-acetylenolpyruvoylglucosamine reductase murB: UDP-N-acetylenolpyruvoylglucosamine reductase~[M] COG0812 UDP-N-acetylmuramate dehydrogenase gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1579 CH63_158 CH63_158 CH63_158 157266 157616 + cupin domain protein [S] COG1917 Uncharacterized conserved protein%2C contains double-stranded beta-helix domain gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_158 CH63_1580 CH63_1580 CH63_1580 1745024 1745136 - 5S ribosomal RNA rRNA gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1580 CH63_1581 CH63_1581 CH63_1581 1745250 1748151 - 23S ribosomal RNA rRNA gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1581 CH63_1582 CH63_1582 CH63_1582 1748373 1748448 - tRNA-Ala tRNA gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1582 CH63_1583 CH63_1583 CH63_1583 1748500 1748576 - tRNA-Ile tRNA gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1583 CH63_1584 CH63_1584 CH63_1584 1748685 1750213 - 16S ribosomal RNA rRNA gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1584 CH63_1585 CH63_1585 CH63_1585 1750696 1751229 - flavodoxin domain protein [CH] COG4635 Flavodoxin gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1585 CH63_1586 CH63_1586 CH63_1586 1751251 1752702 - potassium uptake%2C TrkH family protein 2a38: potassium uptake%2C TrkH family protein~[P] COG0168 Trk-type K+ transport systems%2C membrane components gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1586 CH63_1587 CH63_1587 CH63_1587 1752742 1753218 - hypothetical protein conserved hypothetical protein~[S] COG1739 Uncharacterized conserved protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1587 CH63_1588 CH63_1588 CH63_1588 1753291 1753749 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1588 CH63_1589 CH63_1589 CH63_1589 1753854 1754063 - hypothetical protein conserved hypothetical protein~[S] COG1739 Uncharacterized conserved protein gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1589 CH63_159 CH63_159 CH63_159 157664 158872 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_159 CH63_1590 CH63_1590 CH63_1590 1754063 1755394 - metallopeptidase M24 family protein [E] COG0006 Xaa-Pro aminopeptidase gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1590 CH63_1591 CH63_1591 fadB fadB 1755721 1757910 + fatty oxidation complex%2C alpha subunit FadB fadB: fatty oxidation complex%2C alpha subunit FadB~[I] COG1250 3-hydroxyacyl-CoA dehydrogenase gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1591 CH63_1592 CH63_1592 fadA fadA 1757922 1759085 + acetyl-CoA C-acyltransferase FadA fadA: acetyl-CoA C-acyltransferase FadA~[I] COG0183 Acetyl-CoA acetyltransferase gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1592 CH63_1593 CH63_1593 CH63_1593 1759245 1759946 - oxidoreductase NAD-binding domain protein [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1593 CH63_1594 CH63_1594 CH63_1594 1760001 1761497 - decarboxylase%2C UbiD family protein [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1594 CH63_1595 CH63_1595 rfaH rfaH 1761745 1762233 + transcription elongation factor/antiterminator RfaH rfaH: transcription elongation factor/antiterminator RfaH~[K] COG0250 Transcription antiterminator gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1595 CH63_1596 CH63_1596 CH63_1596 1762343 1763365 - delta-aminolevulinic acid dehydratase family protein [H] COG0113 Delta-aminolevulinic acid dehydratase gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1596 CH63_1597 CH63_1597 CH63_1597 1763380 1763715 - tatD related DNase family protein [L] COG0084 Mg-dependent DNase gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1597 CH63_1598 CH63_1598 CH63_1598 1763754 1764533 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1598 CH63_1599 CH63_1599 CH63_1599 1764533 1765555 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1599 CH63_16 CH63_16 CH63_16 14835 15179 - endoribonuclease L-PSP family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_16 CH63_160 CH63_160 yniC yniC 159123 159788 - phosphatase YniC [R] COG0637 Predicted phosphatase/phosphohexomutase gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_160 CH63_1600 CH63_1600 CH63_1600 1765582 1766121 - tatD related DNase family protein [L] COG0084 Mg-dependent DNase gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1600 CH63_1601 CH63_1601 tatC tatC 1766177 1766953 - twin arginine-targeting protein translocase TatC tatC: twin arginine-targeting protein translocase TatC~[U] COG0805 Sec-independent protein secretion pathway component TatC gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1601 CH63_1602 CH63_1602 tatB tatB 1766956 1767618 - twin arginine-targeting protein translocase TatB tatB: twin arginine-targeting protein translocase TatB~[U] COG1826 Sec-independent protein secretion pathway components gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1602 CH63_1603 CH63_1603 tatA tatA 1767622 1767888 - twin arginine-targeting translocase%2C TatA/E family protein tatAE: twin arginine-targeting translocase%2C TatA/E family protein~[U] COG1826 Sec-independent protein secretion pathway components gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1603 CH63_1604 CH63_1604 ubiB ubiB 1768068 1769699 - 2-polyprenylphenol 6-hydroxylase ubiB: 2-polyprenylphenol 6-hydroxylase~[R] COG0661 Predicted unusual protein kinase gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1604 CH63_1605 CH63_1605 CH63_1605 1769699 1770349 - SCP-2 sterol transfer family protein [S] COG3165 Uncharacterized protein conserved in bacteria gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1605 CH63_1606 CH63_1606 ubiE ubiE 1770363 1771118 - ubiquinone/menaquinone biosynthesis methyltransferase ubiE [H] COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1606 CH63_1607 CH63_1607 CH63_1607 1771208 1772713 - rmuC family protein [S] COG1322 Uncharacterized protein conserved in bacteria gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1607 CH63_1608 CH63_1608 CH63_1608 1772921 1773451 - hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1608 CH63_1609 CH63_1609 CH63_1609 1773723 1775534 - carbon starvation CstA family protein [T] COG1966 Carbon starvation protein%2C predicted membrane protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1609 CH63_161 CH63_161 CH63_161 160199 160753 + yniB-like family protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_161 CH63_1610 CH63_1610 CH63_1610 1775898 1776722 - tyrosine phosphatase family protein [T] COG2365 Protein tyrosine/serine phosphatase gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1610 CH63_1611 CH63_1611 udp udp 1776849 1777610 - uridine phosphorylase uridine-psphlse: uridine phosphorylase~[F] COG2820 Uridine phosphorylase gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1611 CH63_1612 CH63_1612 CH63_1612 1778038 1778910 + chlorophyllase enzyme family protein [Q] COG0412 Dienelactone hydrolase and related enzymes gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1612 CH63_1613 CH63_1613 metE metE 1778965 1781241 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~[E] COG0620 Methionine synthase II (cobalamin-independent) gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1613 CH63_1614 CH63_1614 yedA yedA 1782188 1783087 - carboxylate/amino acid/amine transporter family protein 2A78: carboxylate/amino acid/amine transporter family protein~[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1614 CH63_1615 CH63_1615 CH63_1615 1781347 1782300 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1615 CH63_1616 CH63_1616 CH63_1616 1783440 1784396 - membrane transport family protein [R] COG0679 Predicted permeases gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1616 CH63_1617 CH63_1617 CH63_1617 1784497 1785246 - glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1617 CH63_1618 CH63_1618 ugpC ugpC 1785243 1786316 - sn-glycerol-3-phosphate import ATP-binding protein UgpC [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1618 CH63_1619 CH63_1619 CH63_1619 1786323 1787168 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1619 CH63_162 CH63_162 CH63_162 160882 161757 - fructosamine kinase family protein [G] COG3001 Fructosamine-3-kinase gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_162 CH63_1620 CH63_1620 CH63_1620 1787165 1788052 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1620 CH63_1621 CH63_1621 CH63_1621 1788350 1789669 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1621 CH63_1622 CH63_1622 CH63_1622 1790224 1790715 + CS1 type fimbrial major subunit gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1622 CH63_1623 CH63_1623 CH63_1623 1790982 1793315 + hypothetical protein conserved hypothetical protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1623 CH63_1624 CH63_1624 CH63_1624 1793333 1794019 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1624 CH63_1625 CH63_1625 CH63_1625 1793991 1794638 + hypothetical protein conserved hypothetical protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1625 CH63_1626 CH63_1626 CH63_1626 1794700 1795218 + putative exported protein gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1626 CH63_1627 CH63_1627 CH63_1627 1795282 1796388 + putative exported protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1627 CH63_1628 CH63_1628 CH63_1628 1796503 1796961 - hypothetical protein conserved hypothetical protein gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1628 CH63_1629 CH63_1629 livF livF 1797192 1797893 - high-affinity branched-chain amino acid transport ATP-binding protein LivF [E] COG0410 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1629 CH63_163 CH63_163 CH63_163 162062 162955 - ABC 3 transport family protein [P] COG1108 ABC-type Mn2+/Zn2+ transport systems%2C permease components gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_163 CH63_1630 CH63_1630 CH63_1630 1797938 1798705 - ABC transporter family protein [E] COG0411 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1630 CH63_1631 CH63_1631 CH63_1631 1798702 1799988 - branched-chain amino acid transport system / permease component family protein [E] COG4177 ABC-type branched-chain amino acid transport system%2C permease component gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1631 CH63_1632 CH63_1632 CH63_1632 1799985 1800911 - branched-chain amino acid transport system / permease component family protein [E] COG0559 Branched-chain amino acid ABC-type transport system%2C permease components gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1632 CH63_1633 CH63_1633 CH63_1633 1801092 1802207 - receptor ligand binding region family protein [E] COG0683 ABC-type branched-chain amino acid transport systems%2C periplasmic component gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1633 CH63_1634 CH63_1634 CH63_1634 1802629 1803021 + acetyltransferase domain protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1634 CH63_1635 CH63_1635 CH63_1635 1803267 1803725 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1635 CH63_1636 CH63_1636 rpoH rpoH 1803939 1804796 - alternative sigma factor RpoH rpoH_proteo: alternative sigma factor RpoH~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1636 CH63_1637 CH63_1637 ftsX ftsX 1805107 1806060 - putative protein insertion permease FtsX ftsX: putative protein insertion permease FtsX~[D] COG2177 Cell division protein gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1637 CH63_1638 CH63_1638 ftsE ftsE 1806050 1806718 - cell division ATP-binding protein FtsE ftsE: cell division ATP-binding protein FtsE~[D] COG2884 Predicted ATPase involved in cell division gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1638 CH63_1639 CH63_1639 ftsY ftsY 1806724 1808376 - signal recognition particle-docking protein FtsY ftsY: signal recognition particle-docking protein FtsY~[U] COG0552 Signal recognition particle GTPase gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1639 CH63_164 CH63_164 CH63_164 162952 163836 - ABC 3 transport family protein [P] COG1108 ABC-type Mn2+/Zn2+ transport systems%2C permease components gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_164 CH63_1640 CH63_1640 rsmD rsmD 1808658 1809320 + 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [L] COG0742 N6-adenine-specific methylase gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1640 CH63_1641 CH63_1641 CH63_1641 1809310 1809582 + hypothetical protein conserved hypothetical protein~[S] COG3776 Predicted membrane protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1641 CH63_1642 CH63_1642 CH63_1642 1809769 1810188 - hypothetical protein conserved hypothetical protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1642 CH63_1643 CH63_1643 CH63_1643 1810400 1810720 - hypothetical protein conserved hypothetical protein~[S] COG4517 Uncharacterized protein conserved in bacteria gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1643 CH63_1644 CH63_1644 CH63_1644 1811010 1811636 + yhhN-like family protein [S] COG3714 Predicted membrane protein gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1644 CH63_1645 CH63_1645 CH63_1645 1812050 1813024 + E1-E2 ATPase family protein [P] COG2217 Cation transport ATPase gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1645 CH63_1646 CH63_1646 cadA cadA 1813105 1814415 + cadmium-translocating P-type ATPase ATPase-IB2_Cd: cadmium-translocating P-type ATPase~[P] COG2217 Cation transport ATPase gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1646 CH63_1647 CH63_1647 CH63_1647 1814515 1814769 - sulfurtransferase TusA family protein [O] COG0425 Predicted redox protein%2C regulator of disulfide bond formation gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1647 CH63_1648 CH63_1648 CH63_1648 1815053 1815721 + hypothetical protein conserved hypothetical integral membrane family protein~[S] COG1738 Uncharacterized conserved protein gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1648 CH63_1649 CH63_1649 CH63_1649 1815935 1816378 + putative lipoprotein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1649 CH63_165 CH63_165 CH63_165 163836 164726 - ABC transporter family protein [P] COG1121 ABC-type Mn/Zn transport systems%2C ATPase component gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_165 CH63_1650 CH63_1650 glpC glpC 1816540 1817706 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit~[C] COG0247 Fe-S oxidoreductase gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1650 CH63_1651 CH63_1651 glpB glpB 1817832 1819106 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C B subunit~[E] COG3075 Anaerobic glycerol-3-phosphate dehydrogenase gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1651 CH63_1652 CH63_1652 glpA glpA 1819096 1820751 - glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit~[C] COG0578 Glycerol-3-phosphate dehydrogenase gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1652 CH63_1653 CH63_1653 CH63_1653 1821376 1822491 + glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1653 CH63_1654 CH63_1654 CH63_1654 1822565 1823764 - viral enhancin family protein gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1654 CH63_1655 CH63_1655 CH63_1655 1824041 1824850 - HAD hydrolase%2C IIB family protein HAD-SF-IIB: HAD hydrolase%2C IIB family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1655 CH63_1656 CH63_1656 CH63_1656 1824885 1825880 - prolyl oligopeptidase family protein [I] COG2267 Lysophospholipase gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1656 CH63_1657 CH63_1657 rhtB rhtB 1826094 1826714 + homoserine/homoserine lactone efflux protein [E] COG1280 Putative threonine efflux protein gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1657 CH63_1658 CH63_1658 CH63_1658 1826765 1827385 - homoserine/Threonine efflux family protein 2A76: homoserine/Threonine efflux family protein~[E] COG1280 Putative threonine efflux protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1658 CH63_1659 CH63_1659 recQ recQ 1827492 1829324 - ATP-dependent DNA helicase RecQ recQ: ATP-dependent DNA helicase RecQ~[L] COG0514 Superfamily II DNA helicase gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1659 CH63_166 CH63_166 CH63_166 164723 165691 - periplasmic solute binding family protein [P] COG0803 ABC-type metal ion transport system%2C periplasmic component/surface adhesin gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_166 CH63_1660 CH63_1660 pldA pldA 1829464 1830279 - phospholipase A1 [M] COG2829 Outer membrane phospholipase A gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1660 CH63_1661 CH63_1661 CH63_1661 1830501 1830971 + hypothetical protein conserved hypothetical protein~[Q] COG2050 Uncharacterized protein%2C possibly involved in aromatic compounds catabolism gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1661 CH63_1662 CH63_1662 CH63_1662 1831058 1831948 + eamA-like transporter family protein [R] COG2962 Predicted permeases gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1662 CH63_1663 CH63_1663 corA corA 1832046 1832996 - magnesium and cobalt transport protein CorA corA: magnesium and cobalt transport protein CorA~[P] COG0598 Mg2+ and Co2+ transporters gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1663 CH63_1664 CH63_1664 CH63_1664 1833645 1834475 - nitronate monooxygenase family protein [R] COG5564 Predicted TIM-barrel enzyme%2C possibly a dioxygenase gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1664 CH63_1665 CH63_1665 CH63_1665 1834501 1835718 - hypothetical protein conserved hypothetical protein~[S] COG5441 Uncharacterized conserved protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1665 CH63_1666 CH63_1666 CH63_1666 1836146 1836832 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1666 CH63_1667 CH63_1667 uvrD uvrD 1836946 1839108 - DNA helicase II uvrD: DNA helicase II~[L] COG0210 Superfamily I DNA and RNA helicases gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1667 CH63_1668 CH63_1668 CH63_1668 1839210 1839926 - HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1668 CH63_1669 CH63_1669 xerC xerC 1839926 1840837 - tyrosine recombinase XerC recomb_XerC: tyrosine recombinase XerC~[L] COG4973 Site-specific recombinase XerC gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1669 CH63_167 CH63_167 CH63_167 165903 166565 + transglycosylase SLT domain protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_167 CH63_1670 CH63_1670 CH63_1670 1840834 1841538 - hypothetical protein conserved hypothetical protein~[S] COG3159 Uncharacterized protein conserved in bacteria gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1670 CH63_1671 CH63_1671 dapF dapF 1841603 1842427 - diaminopimelate epimerase dapF: diaminopimelate epimerase~[E] COG0253 Diaminopimelate epimerase gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1671 CH63_1672 CH63_1672 CH63_1672 1842611 1842799 - prokaryotic lipo-attachment site family protein [N] COG5567 Predicted small periplasmic lipoprotein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1672 CH63_1673 CH63_1673 cyaY cyaY 1842951 1843271 + iron donor protein CyaY feS_CyaY: iron donor protein CyaY~[P] COG1965 Protein implicated in iron transport%2C frataxin homolog gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1673 CH63_1674 CH63_1674 CH63_1674 1843515 1846067 - adenylate cyclase%2C class-I family protein [F] COG3072 Adenylate cyclase gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1674 CH63_1675 CH63_1675 hemC hemC 1846561 1847502 + hydroxymethylbilane synthase hemC: hydroxymethylbilane synthase~[H] COG0181 Porphobilinogen deaminase gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1675 CH63_1676 CH63_1676 CH63_1676 1847499 1848248 + uroporphyrinogen-III synthase HemD family protein [H] COG1587 Uroporphyrinogen-III synthase gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1676 CH63_1677 CH63_1677 CH63_1677 1848279 1849403 + hemX family protein [H] COG2959 Uncharacterized enzyme of heme biosynthesis gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1677 CH63_1678 CH63_1678 CH63_1678 1849406 1850626 + hemY family protein [H] COG3071 Uncharacterized enzyme of heme biosynthesis gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1678 CH63_1679 CH63_1679 CH63_1679 1850819 1851277 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1679 CH63_168 CH63_168 CH63_168 166687 167370 - marC integral membrane family protein [U] COG2095 Multiple antibiotic transporter gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_168 CH63_1680 CH63_1680 CH63_1680 1852144 1852220 - tRNA-Pro tRNA gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1680 CH63_1681 CH63_1681 CH63_1681 1852296 1852382 - tRNA-Leu tRNA gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1681 CH63_1683 CH63_1683 CH63_1683 1852399 1852474 - tRNA-His tRNA gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1683 CH63_1684 CH63_1684 CH63_1684 1852558 1852634 - tRNA-Arg tRNA gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1684 CH63_1685 CH63_1685 CH63_1685 1852783 1854174 - amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1685 CH63_1686 CH63_1686 CH63_1686 1854698 1855438 - glycosyltransferase%2C WecB/TagA/CpsF family protein wecG_tagA_cpsF: glycosyltransferase%2C WecB/TagA/CpsF family protein~[M] COG1922 Teichoic acid biosynthesis proteins gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1686 CH63_1687 CH63_1687 CH63_1687 1855447 1856811 - wzyE family protein gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1687 CH63_1688 CH63_1688 CH63_1688 1856808 1857893 - 4-alpha-L-fucosyltransferase glycosyl transferase group 56 family protein gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1688 CH63_1689 CH63_1689 CH63_1689 1857916 1859172 - polysaccharide biosynthesis family protein [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1689 CH63_169 CH63_169 CH63_169 167689 167940 + hypothetical protein conserved hypothetical protein gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_169 CH63_1690 CH63_1690 wecE wecE 1859174 1860304 - TDP-4-keto-6-deoxy-D-glucose transaminase family protein ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase family protein~[M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1690 CH63_1691 CH63_1691 wecD wecD 1860306 1861043 - TDP-D-fucosamine acetyltransferase wecD_rffC: TDP-D-fucosamine acetyltransferase~[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1691 CH63_1692 CH63_1692 rfbA rfbA 1861021 1861902 - glucose-1-phosphate thymidylyltransferase rmlA: glucose-1-phosphate thymidylyltransferase~[M] COG1209 dTDP-glucose pyrophosphorylase gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1692 CH63_1693 CH63_1693 rfbB rfbB 1862197 1863264 - dTDP-glucose 4%2C6-dehydratase dTDP_gluc_dehyt: dTDP-glucose 4%2C6-dehydratase~[M] COG1088 dTDP-D-glucose 4%2C6-dehydratase gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1693 CH63_1694 CH63_1694 CH63_1694 1863261 1864523 - nucleotide sugar dehydrogenase family protein NDP-sugDHase: nucleotide sugar dehydrogenase family protein~[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1694 CH63_1695 CH63_1695 CH63_1695 1864520 1865650 - UDP-N-acetylglucosamine 2-epimerase wecB: UDP-N-acetylglucosamine 2-epimerase~[M] COG0381 UDP-N-acetylglucosamine 2-epimerase gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1695 CH63_1696 CH63_1696 CH63_1696 1865931 1866992 - chain length determinant family protein [M] COG3765 Chain length determinant protein gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1696 CH63_1697 CH63_1697 wecA wecA 1867028 1868125 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase~[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1697 CH63_1698 CH63_1698 rho rho 1868660 1869919 - transcription termination factor Rho rho: transcription termination factor Rho~[K] COG1158 Transcription termination factor gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1698 CH63_1699 CH63_1699 trxA trxA 1870399 1870725 - thioredoxin thioredoxin: thioredoxin~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1699 CH63_17 CH63_17 CH63_17 15310 17214 + DEAD_2 family protein [KL] COG1199 Rad3-related DNA helicases gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_17 CH63_170 CH63_170 CH63_170 168699 168911 - KTSC domain protein gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_170 CH63_1700 CH63_1700 CH63_1700 1870844 1872130 + DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1700 CH63_1701 CH63_1701 CH63_1701 1872137 1873629 + ppx/GppA phosphatase family protein pseudogene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1701 CH63_1703 CH63_1703 rep rep 1873797 1875818 - ATP-dependent DNA helicase Rep rep: ATP-dependent DNA helicase Rep~[L] COG0210 Superfamily I DNA and RNA helicases gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1703 CH63_1704 CH63_1704 CH63_1704 1876022 1876303 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1704 CH63_1705 CH63_1705 CH63_1705 1876542 1877333 + glutamine cyclotransferase family protein [O] COG3823 Glutamine cyclotransferase gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1705 CH63_1706 CH63_1706 CH63_1706 1877430 1878638 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1706 CH63_1707 CH63_1707 CH63_1707 1879448 1879978 + putative fimbrial protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1707 CH63_1708 CH63_1708 CH63_1708 1880042 1880773 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1708 CH63_1709 CH63_1709 CH63_1709 1880801 1883428 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1709 CH63_171 CH63_171 thrS thrS 169302 171230 + threonine--tRNA ligase thrS: threonine--tRNA ligase~[J] COG0441 Threonyl-tRNA synthetase gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_171 CH63_1710 CH63_1710 CH63_1710 1883445 1884812 + fimbrial family protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1710 CH63_1711 CH63_1711 CH63_1711 1884778 1885596 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1711 CH63_1712 CH63_1712 imm imm 1886231 1886488 - colicin-E9 immunity protein gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1712 CH63_1713 CH63_1713 CH63_1713 1886490 1886741 - DNase/tRNase domain of colicin-like bacteriocin family protein gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1713 CH63_1714 CH63_1714 CH63_1714 1886994 1887257 - hypothetical protein conserved hypothetical protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1714 CH63_1715 CH63_1715 CH63_1715 1887257 1888699 - S-type Pyocin family protein gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1715 CH63_1716 CH63_1716 CH63_1716 1888895 1889095 - colicin/pyocin immunity family domain protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1716 CH63_1717 CH63_1717 ilvC ilvC 1889276 1890754 - ketol-acid reductoisomerase ilvC: ketol-acid reductoisomerase~[EH] COG0059 Ketol-acid reductoisomerase gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1717 CH63_1718 CH63_1718 CH63_1718 1891040 1891921 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1718 CH63_1719 CH63_1719 CH63_1719 1891976 1892185 - hypothetical protein conserved hypothetical protein gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1719 CH63_172 CH63_172 infC infC 171435 171785 + translation initiation factor IF-3 infC: translation initiation factor IF-3~[J] COG0290 Translation initiation factor 3 (IF-3) gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_172 CH63_1720 CH63_1720 CH63_1720 1892833 1893711 + hypothetical protein conserved hypothetical family protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1720 CH63_1721 CH63_1721 CH63_1721 1893695 1894156 + hypothetical protein conserved hypothetical protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1721 CH63_1722 CH63_1722 CH63_1722 1894236 1894697 + hypothetical protein conserved hypothetical protein gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1722 CH63_1723 CH63_1723 CH63_1723 1894777 1895241 + hypothetical protein conserved hypothetical protein gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1723 CH63_1724 CH63_1724 ilvA ilvA 1895372 1896916 - threonine ammonia-lyase%2C biosynthetic ilvA_2Cterm: threonine ammonia-lyase%2C biosynthetic~[E] COG1171 Threonine dehydratase gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1724 CH63_1725 CH63_1725 CH63_1725 1896922 1898773 - dehydratase family protein pseudogene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1725 CH63_1727 CH63_1727 ilvE ilvE 1899084 1900010 - branched-chain amino acid aminotransferase ilvE_I: branched-chain amino acid aminotransferase~[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1727 CH63_1728 CH63_1728 CH63_1728 1900033 1900290 - ACT domain protein [S] COG3978 Acetolactate synthase (isozyme II)%2C small (regulatory) subunit gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1728 CH63_1729 CH63_1729 ilvB ilvB 1900287 1901933 - acetolactate synthase%2C large subunit%2C biosynthetic type acolac_lg: acetolactate synthase%2C large subunit%2C biosynthetic type~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1729 CH63_173 CH63_173 rpmI rpmI 171882 172079 + ribosomal protein L35 rpmI_bact: ribosomal protein L35~[J] COG0291 Ribosomal protein L35 gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_173 CH63_1730 CH63_1730 CH63_1730 1902556 1904079 + sigma-54 interaction domain protein [O] COG0606 Predicted ATPase with chaperone activity gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1730 CH63_1731 CH63_1731 CH63_1731 1904336 1904674 - hypothetical protein conserved hypothetical protein~[S] COG3085 Uncharacterized protein conserved in bacteria gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1731 CH63_1732 CH63_1732 CH63_1732 1905661 1906653 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1732 CH63_1733 CH63_1733 CH63_1733 1904793 1905674 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1733 CH63_1734 CH63_1734 CH63_1734 1906653 1907651 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1734 CH63_1735 CH63_1735 ccmA ccmA 1907684 1909165 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1735 CH63_1736 CH63_1736 ytfQ ytfQ 1909260 1910216 - ABC transporter periplasmic-binding protein ytfQ [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1736 CH63_1737 CH63_1737 CH63_1737 1911194 1911269 - tRNA-Trp tRNA gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1737 CH63_1738 CH63_1738 CH63_1738 1911278 1911354 - tRNA-Asp tRNA gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1738 CH63_1739 CH63_1739 CH63_1739 1911480 1911592 - 5S ribosomal RNA rRNA gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1739 CH63_174 CH63_174 rplT rplT 172117 172473 + ribosomal protein L20 rplT_bact: ribosomal protein L20~[J] COG0292 Ribosomal protein L20 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_174 CH63_1740 CH63_1740 CH63_1740 1911706 1914608 - 23S ribosomal RNA rRNA gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1740 CH63_1741 CH63_1741 CH63_1741 1914864 1914939 - tRNA-Glu tRNA gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1741 CH63_1742 CH63_1742 CH63_1742 1915082 1916610 - 16S ribosomal RNA rRNA gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1742 CH63_1743 CH63_1743 murI murI 1917075 1917938 - glutamate racemase glut_race: glutamate racemase~[M] COG0796 Glutamate racemase gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1743 CH63_1744 CH63_1744 btuB btuB 1917883 1919760 - TonB-dependent vitamin B12 receptor tonB-B12: TonB-dependent vitamin B12 receptor~[H] COG4206 Outer membrane cobalamin receptor protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1744 CH63_1745 CH63_1745 trmA trmA 1920240 1921343 + tRNA (uracil(54)-C(5))-methyltransferase trmA_only: tRNA (uracil(54)-C(5))-methyltransferase~[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1745 CH63_1746 CH63_1746 yijD yijD 1921477 1921884 - inner membrane protein yijD gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1746 CH63_1747 CH63_1747 fabR fabR 1921897 1922532 - HTH-type transcriptional repressor fabR [K] COG1309 Transcriptional regulator gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1747 CH63_1748 CH63_1748 CH63_1748 1924133 1925050 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1748 CH63_1749 CH63_1749 CH63_1749 1922750 1924150 + pyridine nucleotide-disulfide oxidoreductase family protein [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1749 CH63_175 CH63_175 pheS pheS 172972 173955 + phenylalanine--tRNA ligase%2C alpha subunit pheS: phenylalanine--tRNA ligase%2C alpha subunit~[J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_175 CH63_1750 CH63_1750 CH63_1750 1925197 1925928 + hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0678 Peroxiredoxin gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1750 CH63_1751 CH63_1751 CH63_1751 1926023 1927486 + glucose inhibited division A family protein [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1751 CH63_1752 CH63_1752 CH63_1752 1927602 1928405 - hypothetical protein tonB_Cterm: TonB family C-terminal domain protein~[M] COG0810 Periplasmic protein TonB%2C links inner and outer membranes gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1752 CH63_1753 CH63_1753 CH63_1753 1928470 1929798 - type I secretion membrane fusion%2C HlyD family protein type_I_hlyD: type I secretion membrane fusion%2C HlyD family protein~[M] COG0845 Membrane-fusion protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1753 CH63_1754 CH63_1754 CH63_1754 1929874 1931682 - type I secretion system ATPase family protein type_I_sec_PrtD: type I secretion system ATPase family protein~[R] COG4618 ABC-type protease/lipase transport system%2C ATPase and permease components gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1754 CH63_1755 CH63_1755 CH63_1755 1931848 1932465 - heme-binding A family protein gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1755 CH63_1756 CH63_1756 CH63_1756 1932687 1935178 - tonB dependent receptor family protein%3BtonB-dependent Receptor Plug domain protein pseudogene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1756 CH63_1758 CH63_1758 CH63_1758 1935489 1935614 + hypothetical protein conserved hypothetical protein gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1758 CH63_1759 CH63_1759 argH argH 1935777 1937150 - argininosuccinate lyase argH: argininosuccinate lyase~[E] COG0165 Argininosuccinate lyase gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1759 CH63_176 CH63_176 pheT pheT 173969 176356 + phenylalanine--tRNA ligase%2C beta subunit pheT_bact: phenylalanine--tRNA ligase%2C beta subunit~[J] COG0072 Phenylalanyl-tRNA synthetase beta subunit gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_176 CH63_1760 CH63_1760 argB argB 1937317 1938090 - acetylglutamate kinase argB: acetylglutamate kinase~[E] COG0548 Acetylglutamate kinase gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1760 CH63_1761 CH63_1761 argC argC 1938259 1939263 - N-acetyl-gamma-glutamyl-phosphate reductase argC: N-acetyl-gamma-glutamyl-phosphate reductase~[E] COG0002 Acetylglutamate semialdehyde dehydrogenase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1761 CH63_1762 CH63_1762 argE argE 1939514 1940677 + acetylornithine deacetylase acOrn-deacetyl: acetylornithine deacetylase~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1762 CH63_1763 CH63_1763 CH63_1763 1941051 1943687 + phosphoenolpyruvate carboxylase family protein [C] COG2352 Phosphoenolpyruvate carboxylase gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1763 CH63_1764 CH63_1764 CH63_1764 1944429 1944944 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1764 CH63_1765 CH63_1765 CH63_1765 1944998 1945783 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1765 CH63_1766 CH63_1766 metF metF 1945961 1946845 - methylenetetrahydrofolate reductase [NAD(P)H] fadh2: methylenetetrahydrofolate reductase [NAD(P)H]~[E] COG0685 5%2C10-methylenetetrahydrofolate reductase gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1766 CH63_1767 CH63_1767 CH63_1767 1947078 1949513 - aspartate kinase domain protein asp_kinase: aspartate kinase domain protein~[E] COG0527 Aspartokinases gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1767 CH63_1768 CH63_1768 CH63_1768 1949516 1949659 - cys/Met metabolism PLP-dependent enzyme family protein [E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1768 CH63_1769 CH63_1769 metB metB 1949686 1950675 - O-succinylhomoserine (thiol)-lyase O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1769 CH63_177 CH63_177 ihfA ihfA 176361 176657 + integration host factor%2C alpha subunit himA: integration host factor%2C alpha subunit~[L] COG0776 Bacterial nucleoid DNA-binding protein gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_177 CH63_1770 CH63_1770 CH63_1770 1951053 1951370 + met Apo-repressor%2C MetJ family protein [KE] COG3060 Transcriptional regulator of met regulon gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1770 CH63_1771 CH63_1771 yiaA yiaA 1951719 1952174 + inner membrane protein yiaA [S] COG4682 Predicted membrane protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1771 CH63_1772 CH63_1772 rpmE rpmE 1952717 1952932 - ribosomal protein L31 L31: ribosomal protein L31~[J] COG0254 Ribosomal protein L31 gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1772 CH63_1773 CH63_1773 priA priA 1953175 1955373 + primosomal protein N' priA: primosomal protein N'~[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1773 CH63_1774 CH63_1774 CH63_1774 1955460 1955603 + hypothetical protein conserved hypothetical protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1774 CH63_1775 CH63_1775 CH63_1775 1955726 1956754 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1775 CH63_1776 CH63_1776 ftsN ftsN 1956919 1957665 + cell division protein FtsN ftsN: cell division protein FtsN~[D] COG3087 Cell division protein gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1776 CH63_1777 CH63_1777 hslV hslV 1957765 1958289 + ATP-dependent protease HslVU%2C peptidase subunit ATP_dep_HslV: ATP-dependent protease HslVU%2C peptidase subunit~[O] COG5405 ATP-dependent protease HslVU (ClpYQ)%2C peptidase subunit gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1777 CH63_1778 CH63_1778 hslU hslU 1958360 1959691 + ATP-dependent protease HslVU%2C ATPase subunit hslU: ATP-dependent protease HslVU%2C ATPase subunit~[O] COG1220 ATP-dependent protease HslVU (ClpYQ)%2C ATPase subunit gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1778 CH63_1779 CH63_1779 menA menA 1959927 1960844 + 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase menA: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~[H] COG1575 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1779 CH63_178 CH63_178 CH63_178 176991 177449 + hypothetical protein conserved hypothetical protein gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_178 CH63_1780 CH63_1780 rraA rraA 1960986 1961471 + regulator of ribonuclease activity A rraA_entero: regulator of ribonuclease activity A~[H] COG0684 Demethylmenaquinone methyltransferase gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1780 CH63_1781 CH63_1781 CH63_1781 1961588 1962172 - hypothetical protein conserved hypothetical protein gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1781 CH63_1782 CH63_1782 CH63_1782 1962802 1963041 - hypothetical protein conserved hypothetical protein gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1782 CH63_1783 CH63_1783 CH63_1783 1963254 1964546 + hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1783 CH63_1784 CH63_1784 CH63_1784 1964539 1966653 + ABC transporter family protein [V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1784 CH63_1785 CH63_1785 CH63_1785 1967038 1967496 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1785 CH63_1786 CH63_1786 CH63_1786 1967704 1967943 - hypothetical protein conserved hypothetical protein~[S] COG3074 Uncharacterized protein conserved in bacteria gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1786 CH63_1787 CH63_1787 CH63_1787 1968571 1969420 + major intrinsic family protein pseudogene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1787 CH63_1789 CH63_1789 glpK glpK 1969597 1971120 + glycerol kinase glycerol_kin: glycerol kinase~[C] COG0554 Glycerol kinase gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1789 CH63_179 CH63_179 CH63_179 177676 178683 + fecCD transport family protein [H] COG4139 ABC-type cobalamin transport system%2C permease component gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_179 CH63_1790 CH63_1790 glpX glpX 1971357 1972367 + fructose-1%2C6-bisphosphatase%2C class II glpX: fructose-1%2C6-bisphosphatase%2C class II~[G] COG1494 Fructose-1%2C6-bisphosphatase/sedoheptulose 1%2C7-bisphosphatase and related proteins gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1790 CH63_1791 CH63_1791 CH63_1791 1972522 1973268 + oxidoreductase NAD-binding domain protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1791 CH63_1792 CH63_1792 CH63_1792 1973609 1974043 - hypothetical protein conserved hypothetical protein~[S] COG3152 Predicted membrane protein gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1792 CH63_1793 CH63_1793 CH63_1793 1974191 1974826 + hypothetical protein conserved hypothetical protein gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1793 CH63_1794 CH63_1794 tpiA tpiA 1974955 1975722 + triose-phosphate isomerase tim: triose-phosphate isomerase~[G] COG0149 Triosephosphate isomerase gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1794 CH63_1795 CH63_1795 CH63_1795 1975954 1977132 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1795 CH63_1796 CH63_1796 CH63_1796 1977326 1978063 + glcNAc-PI de-N-acetylase family protein [S] COG2120 Uncharacterized proteins%2C LmbE homologs gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1796 CH63_1797 CH63_1797 ligK ligK 1978060 1978773 + 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase~[H] COG0684 Demethylmenaquinone methyltransferase gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1797 CH63_1798 CH63_1798 ybhI ybhI 1978839 1980266 + inner membrane protein ybhI [P] COG0471 Di- and tricarboxylate transporters gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1798 CH63_1799 CH63_1799 CH63_1799 1980384 1981160 + bacterial extracellular solute-binding family protein [P] COG0725 ABC-type molybdate transport system%2C periplasmic component gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1799 CH63_18 CH63_18 yeaZ yeaZ 17286 17984 + tRNA threonylcarbamoyl adenosine modification protein YeaZ T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ~[O] COG1214 Inactive homolog of metal-dependent proteases%2C putative molecular chaperone gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_18 CH63_180 CH63_180 CH63_180 178753 179307 + glutathione peroxidase family protein [O] COG0386 Glutathione peroxidase gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_180 CH63_1800 CH63_1800 CH63_1800 1981410 1982399 - sulfate ABC transporter%2C sulfate-binding family protein 3a0106s03: sulfate ABC transporter%2C sulfate-binding family protein~[P] COG1613 ABC-type sulfate transport system%2C periplasmic component gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1800 CH63_1801 CH63_1801 CH63_1801 1981141 1981413 + hypothetical protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1801 CH63_1802 CH63_1802 pfkA pfkA 1982620 1983603 - 6-phosphofructokinase PFKA_ATP: 6-phosphofructokinase~[G] COG0205 6-phosphofructokinase gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1802 CH63_1803 CH63_1803 CH63_1803 1983821 1984723 - cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG0053 Predicted Co/Zn/Cd cation transporters gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1803 CH63_1804 CH63_1804 CH63_1804 1985285 1986205 - hypothetical protein T_den_put_tspse: conserved hypothetical family protein~[S] COG5464 Uncharacterized conserved protein gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1804 CH63_1805 CH63_1805 CH63_1805 1986922 1987410 - LTXXQ motif family protein [UNTP] COG3678 P pilus assembly/Cpx signaling pathway%2C periplasmic inhibitor/zinc-resistance associated protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1805 CH63_1806 CH63_1806 cpxR cpxR 1987584 1988282 + transcriptional regulatory protein CpxR [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1806 CH63_1807 CH63_1807 cpxA cpxA 1988279 1989655 + sensor protein CpxA [T] COG0642 Signal transduction histidine kinase gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1807 CH63_1808 CH63_1808 CH63_1808 1989704 1990768 - methylated-DNA--[]-cysteine S-methyltransferase family protein ogt: methylated-DNA--[]-cysteine S-methyltransferase family protein~[F] COG2169 Adenosine deaminase gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1808 CH63_1809 CH63_1809 trmL trmL 1990957 1991445 + tRNA (cytidine(34)-2'-O)-methyltransferase tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase~[J] COG0219 Predicted rRNA methylase (SpoU class) gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1809 CH63_181 CH63_181 CH63_181 179332 180090 + ABC transporter family protein [H] COG4138 ABC-type cobalamin transport system%2C ATPase component gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_181 CH63_1810 CH63_1810 cysE cysE 1991568 1992389 - serine O-acetyltransferase cysE: serine O-acetyltransferase~[E] COG1045 Serine acetyltransferase gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1810 CH63_1811 CH63_1811 CH63_1811 1992655 1993674 - ketopantoate reductase PanE/ApbA family protein [C] COG0240 Glycerol-3-phosphate dehydrogenase gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1811 CH63_1812 CH63_1812 secB secB 1993674 1994150 - protein-export chaperone SecB secB: protein-export chaperone SecB~[U] COG1952 Preprotein translocase subunit SecB gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1812 CH63_1813 CH63_1813 grxC grxC 1994238 1994486 - glutaredoxin 3 GRX_bact: glutaredoxin 3~[O] COG0695 Glutaredoxin and related proteins gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1813 CH63_1814 CH63_1814 CH63_1814 1994605 1995036 - rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1814 CH63_1815 CH63_1815 gpmI gpmI 1995436 1996983 + phosphoglycerate mutase pgm_bpd_ind: phosphoglycerate mutase~[G] COG0696 Phosphoglyceromutase gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1815 CH63_1816 CH63_1816 CH63_1816 1996993 1998363 + peptidase M23 family protein [D] COG4942 Membrane-bound metallopeptidase gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1816 CH63_1817 CH63_1817 CH63_1817 1998387 1998824 + divergent polysaccharide deacetylase family protein [S] COG2861 Uncharacterized protein conserved in bacteria gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1817 CH63_1818 CH63_1818 CH63_1818 1998821 1999321 + divergent polysaccharide deacetylase family protein [S] COG2861 Uncharacterized protein conserved in bacteria gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1818 CH63_1819 CH63_1819 tdh tdh 1999459 2000484 - L-threonine 3-dehydrogenase tdh: L-threonine 3-dehydrogenase~[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1819 CH63_182 CH63_182 CH63_182 180440 181594 + beta-eliminating lyase family protein [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_182 CH63_1820 CH63_1820 kbl kbl 2000494 2001705 - glycine C-acetyltransferase 2am3keto_CoA: glycine C-acetyltransferase~[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1820 CH63_1821 CH63_1821 rfaD rfaD 2001951 2002883 + ADP-glyceromanno-heptose 6-epimerase heptose_epim: ADP-glyceromanno-heptose 6-epimerase~[MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1821 CH63_1822 CH63_1822 waaF waaF 2002914 2003978 + lipopolysaccharide heptosyltransferase II heptsyl_trn_II: lipopolysaccharide heptosyltransferase II~[M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1822 CH63_1823 CH63_1823 waaC waaC 2003978 2004943 + lipopolysaccharide heptosyltransferase I heptsyl_trn_I: lipopolysaccharide heptosyltransferase I~[M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1823 CH63_1824 CH63_1824 CH63_1824 2005363 2006640 + glycosyl transferases group 1 family protein [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1824 CH63_1825 CH63_1825 CH63_1825 2006641 2007423 + glycosyltransferase like 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1825 CH63_1826 CH63_1826 coaD coaD 2007420 2007899 + pantetheine-phosphate adenylyltransferase coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase~[H] COG0669 Phosphopantetheine adenylyltransferase gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1826 CH63_1827 CH63_1827 mutM mutM 2007905 2008714 - DNA-formamidopyrimidine glycosylase fpg: DNA-formamidopyrimidine glycosylase~[L] COG0266 Formamidopyrimidine-DNA glycosylase gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1827 CH63_1828 CH63_1828 rpmG rpmG 2008797 2008964 - ribosomal protein L33 rpmG_bact: ribosomal protein L33~[J] COG0267 Ribosomal protein L33 gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1828 CH63_1829 CH63_1829 rpmB rpmB 2008976 2009212 - ribosomal protein L28 L28: ribosomal protein L28~[J] COG0227 Ribosomal protein L28 gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1829 CH63_183 CH63_183 arnC arnC 181581 182564 + undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_183 CH63_1830 CH63_1830 CH63_1830 2009475 2010143 - DNA repair RadC family protein radc: DNA repair RadC family protein~[L] COG2003 DNA repair proteins gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1830 CH63_1831 CH63_1831 coaBC coaBC 2010340 2011554 + phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase~[H] COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1831 CH63_1832 CH63_1832 dut dut 2011532 2011990 + dUTP diphosphatase family protein dut: dUTP diphosphatase family protein~[F] COG0756 dUTPase gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1832 CH63_1833 CH63_1833 CH63_1833 2012112 2012708 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1833 CH63_1834 CH63_1834 pyrE pyrE 2012843 2013490 - orotate phosphoribosyltransferase pyrE: orotate phosphoribosyltransferase~[F] COG0461 Orotate phosphoribosyltransferase gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1834 CH63_1835 CH63_1835 rph rph 2013657 2014373 - ribonuclease PH RNasePH: ribonuclease PH~[J] COG0689 RNase PH gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1835 CH63_1836 CH63_1836 CH63_1836 2014500 2015363 + hypothetical protein conserved hypothetical protein~[S] COG1561 Uncharacterized stress-induced protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1836 CH63_1837 CH63_1837 CH63_1837 2015766 2016389 + hypothetical protein conserved hypothetical protein~[S] COG2860 Predicted membrane protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1837 CH63_1838 CH63_1838 CH63_1838 2016402 2018105 - NAD-dependent DNA ligase adenylation domain protein [L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1838 CH63_1839 CH63_1839 gmk gmk 2018506 2019129 + guanylate kinase guanyl_kin: guanylate kinase~[F] COG0194 Guanylate kinase gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1839 CH63_184 CH63_184 CH63_184 182561 184564 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_184 CH63_1840 CH63_1840 rpoZ rpoZ 2019184 2019459 + DNA-directed RNA polymerase%2C omega subunit rpoZ: DNA-directed RNA polymerase%2C omega subunit~[K] COG1758 DNA-directed RNA polymerase%2C subunit K/omega gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1840 CH63_1841 CH63_1841 spoT spoT 2019479 2021587 + bifunctional (p)ppGpp synthase/hydrolase SpoT [TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1841 CH63_1842 CH63_1842 trmH trmH 2021626 2022285 + tRNA guanosine-2'-O-methyltransferase [J] COG0566 rRNA methylases gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1842 CH63_1843 CH63_1843 recG recG 2022286 2024367 + ATP-dependent DNA helicase RecG recG: ATP-dependent DNA helicase RecG~[LK] COG1200 RecG-like helicase gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1843 CH63_1844 CH63_1844 gltS gltS 2024733 2025947 - sodium/glutamate symporter gltS: sodium/glutamate symporter~[E] COG0786 Na+/glutamate symporter gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1844 CH63_1845 CH63_1845 pbuX pbuX 2026185 2027570 + xanthine permease family protein pbuX: xanthine permease family protein~[F] COG2233 Xanthine/uracil permeases gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1845 CH63_1846 CH63_1846 CH63_1846 2027718 2029427 + asmA family protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1846 CH63_1847 CH63_1847 CH63_1847 2029562 2030485 - putative thioesterase domain protein yiiD_Cterm: putative thioesterase domain protein~[KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1847 CH63_1848 CH63_1848 CH63_1848 2030755 2031777 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1848 CH63_1849 CH63_1849 CH63_1849 2031777 2032289 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1849 CH63_185 CH63_185 CH63_185 184561 185466 + polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_185 CH63_1850 CH63_1850 CH63_1850 2032372 2032557 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1850 CH63_1851 CH63_1851 CH63_1851 2032669 2033154 + hexapeptide repeat of succinyl-transferase family protein [R] COG0663 Carbonic anhydrases/acetyltransferases%2C isoleucine patch superfamily gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1851 CH63_1852 CH63_1852 aroE aroE 2033209 2034030 - shikimate dehydrogenase aroE: shikimate dehydrogenase~[E] COG0169 Shikimate 5-dehydrogenase gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1852 CH63_1853 CH63_1853 CH63_1853 2034039 2034611 - telomere recombination family protein [J] COG0009 Putative translation factor (SUA5) gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1853 CH63_1854 CH63_1854 CH63_1854 2034613 2035152 - topoisomerase DNA binding C4 zinc finger family protein [L] COG0551 Zn-finger domain associated with topoisomerase type I gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1854 CH63_1855 CH63_1855 CH63_1855 2035193 2035666 - hypothetical protein conserved hypothetical protein~[S] COG2922 Uncharacterized protein conserved in bacteria gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1855 CH63_1856 CH63_1856 dprA dprA 2035638 2036759 - DNA protecting protein DprA dprA: DNA protecting protein DprA~[LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1856 CH63_1857 CH63_1857 def def 2036894 2037406 + peptide deformylase pept_deformyl: peptide deformylase~[J] COG0242 N-formylmethionyl-tRNA deformylase gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1857 CH63_1858 CH63_1858 fmt fmt 2037431 2038378 + methionyl-tRNA formyltransferase fmt: methionyl-tRNA formyltransferase~[J] COG0223 Methionyl-tRNA formyltransferase gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1858 CH63_1859 CH63_1859 rsmB rsmB 2038472 2039761 + 16S rRNA (cytosine(967)-C(5))-methyltransferase rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase~[J] COG0144 tRNA and rRNA cytosine-C5-methylases gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1859 CH63_186 CH63_186 CH63_186 185463 187127 + dolichyl-phosphate-mannose-mannosyltransferase family protein [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_186 CH63_1860 CH63_1860 CH63_1860 2039817 2041193 + ketopantoate reductase PanE/ApbA family protein [P] COG0569 K+ transport systems%2C NAD-binding component gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1860 CH63_1861 CH63_1861 mscL mscL 2041341 2041745 + large conductance mechanosensitive channel protein mscL: large conductance mechanosensitive channel protein~[M] COG1970 Large-conductance mechanosensitive channel gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1861 CH63_1862 CH63_1862 CH63_1862 2041855 2042055 - hypothetical protein domain of unknown function family protein~[S] COG3036 Uncharacterized protein conserved in bacteria gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1862 CH63_1863 CH63_1863 zntR zntR 2042143 2042568 - Zn(II)-responsive transcriptional regulator zntR: Zn(II)-responsive transcriptional regulator~[K] COG0789 Predicted transcriptional regulators gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1863 CH63_1864 CH63_1864 rplQ rplQ 2043015 2043404 - ribosomal protein L17 L17: ribosomal protein L17~[J] COG0203 Ribosomal protein L17 gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1864 CH63_1865 CH63_1865 rpoA rpoA 2043445 2044434 - DNA-directed RNA polymerase%2C alpha subunit rpoA: DNA-directed RNA polymerase%2C alpha subunit~[K] COG0202 DNA-directed RNA polymerase%2C alpha subunit/40 kD subunit gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1865 CH63_1866 CH63_1866 rpsD rpsD 2044460 2045080 - ribosomal protein S4 rpsD_bact: ribosomal protein S4~[J] COG0522 Ribosomal protein S4 and related proteins gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1866 CH63_1867 CH63_1867 rpsK rpsK 2045111 2045500 - 30S ribosomal protein S11 bact_S11: 30S ribosomal protein S11~[J] COG0100 Ribosomal protein S11 gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1867 CH63_1868 CH63_1868 rpsM rpsM 2045517 2045873 - 30S ribosomal protein S13 bact_S13: 30S ribosomal protein S13~[J] COG0099 Ribosomal protein S13 gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1868 CH63_1869 CH63_1869 rpmJ rpmJ 2046021 2046137 - ribosomal protein L36 rpmJ_bact: ribosomal protein L36~[J] COG0257 Ribosomal protein L36 gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1869 CH63_187 CH63_187 CH63_187 187124 187468 + small Multidrug Resistance family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_187 CH63_1870 CH63_1870 secY secY 2046171 2047502 - preprotein translocase%2C SecY subunit 3a0501s007: preprotein translocase%2C SecY subunit~[U] COG0201 Preprotein translocase subunit SecY gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1870 CH63_1871 CH63_1871 rplO rplO 2047510 2047944 - ribosomal protein L15 rplO_bact: ribosomal protein L15~[J] COG0200 Ribosomal protein L15 gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1871 CH63_1872 CH63_1872 rpmD rpmD 2047948 2048127 - ribosomal protein L30 rpmD_bact: ribosomal protein L30~[J] COG1841 Ribosomal protein L30/L7E gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1872 CH63_1873 CH63_1873 rpsE rpsE 2048130 2048633 - ribosomal protein S5 rpsE_bact: ribosomal protein S5~[J] COG0098 Ribosomal protein S5 gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1873 CH63_1874 CH63_1874 rplR rplR 2048648 2049001 - ribosomal protein L18 L18_bact: ribosomal protein L18~[J] COG0256 Ribosomal protein L18 gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1874 CH63_1875 CH63_1875 rplF rplF 2049011 2049544 - ribosomal protein L6 L6_bact: ribosomal protein L6~[J] COG0097 Ribosomal protein L6P/L9E gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1875 CH63_1876 CH63_1876 rpsH rpsH 2049559 2049951 - 30S ribosomal protein S8 [J] COG0096 Ribosomal protein S8 gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1876 CH63_1877 CH63_1877 CH63_1877 2049985 2050290 - ribosomal S14p/S29e family protein [J] COG0199 Ribosomal protein S14 gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1877 CH63_1878 CH63_1878 rplE rplE 2050304 2050843 - 50S ribosomal protein L5 [J] COG0094 Ribosomal protein L5 gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1878 CH63_1879 CH63_1879 rplX rplX 2050858 2051172 - ribosomal protein L24 rplX_bact: ribosomal protein L24~[J] COG0198 Ribosomal protein L24 gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1879 CH63_188 CH63_188 CH63_188 187465 187851 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_188 CH63_1880 CH63_1880 rplN rplN 2051183 2051554 - ribosomal protein L14 rplN_bact: ribosomal protein L14~[J] COG0093 Ribosomal protein L14 gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1880 CH63_1881 CH63_1881 rpsQ rpsQ 2051735 2051989 - 30S ribosomal protein S17 S17_bact: 30S ribosomal protein S17~[J] COG0186 Ribosomal protein S17 gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1881 CH63_1882 CH63_1882 rpmC rpmC 2051989 2052180 - ribosomal protein L29 L29: ribosomal protein L29~[J] COG0255 Ribosomal protein L29 gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1882 CH63_1883 CH63_1883 rplP rplP 2052180 2052590 - ribosomal protein L16 rplP_bact: ribosomal protein L16~[J] COG0197 Ribosomal protein L16/L10E gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1883 CH63_1884 CH63_1884 rpsC rpsC 2052603 2053301 - ribosomal protein S3 rpsC_bact: ribosomal protein S3~[J] COG0092 Ribosomal protein S3 gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1884 CH63_1885 CH63_1885 rplV rplV 2053319 2053651 - ribosomal protein L22 rplV_bact: ribosomal protein L22~[J] COG0091 Ribosomal protein L22 gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1885 CH63_1886 CH63_1886 rpsS rpsS 2053666 2053944 - ribosomal protein S19 rpsS_bact: ribosomal protein S19~[J] COG0185 Ribosomal protein S19 gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1886 CH63_1887 CH63_1887 rplB rplB 2053959 2054783 - ribosomal protein L2 rplB_bact: ribosomal protein L2~[J] COG0090 Ribosomal protein L2 gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1887 CH63_1888 CH63_1888 rplW rplW 2054800 2055102 - 50S ribosomal protein L23 [J] COG0089 Ribosomal protein L23 gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1888 CH63_1889 CH63_1889 rplD rplD 2055099 2055704 - 50S ribosomal protein L4 rplD_bact: 50S ribosomal protein L4~[J] COG0088 Ribosomal protein L4 gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1889 CH63_189 CH63_189 CH63_189 188164 188595 + nlpC/P60 family protein [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_189 CH63_1890 CH63_1890 rplC rplC 2055721 2056350 - 50S ribosomal protein L3 L3_bact: 50S ribosomal protein L3~[J] COG0087 Ribosomal protein L3 gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1890 CH63_1891 CH63_1891 rpsJ rpsJ 2056383 2056694 - ribosomal protein S10 rpsJ_bact: ribosomal protein S10~[J] COG0051 Ribosomal protein S10 gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1891 CH63_1892 CH63_1892 bfr bfr 2057108 2057581 - bacterioferritin bfr: bacterioferritin~[P] COG2193 Bacterioferritin (cytochrome b1) gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1892 CH63_1893 CH63_1893 bfd bfd 2057660 2057854 - bacterioferritin-associated ferredoxin [P] COG2906 Bacterioferritin-associated ferredoxin gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1893 CH63_1894 CH63_1894 CH63_1894 2058042 2058500 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1894 CH63_1895 CH63_1895 tuf tuf 2058703 2059887 - translation elongation factor Tu EF-Tu: translation elongation factor Tu~[J] COG0050 GTPases - translation elongation factors gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1895 CH63_1896 CH63_1896 fusA fusA 2059960 2062068 - translation elongation factor G EF-G: translation elongation factor G~[J] COG0480 Translation elongation factors (GTPases) gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1896 CH63_1897 CH63_1897 rpsG rpsG 2062162 2062632 - ribosomal protein S7 rpsG_bact: ribosomal protein S7~[J] COG0049 Ribosomal protein S7 gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1897 CH63_1898 CH63_1898 rpsL rpsL 2062729 2063103 - ribosomal protein S12 rpsL_bact: ribosomal protein S12~[J] COG0048 Ribosomal protein S12 gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1898 CH63_1899 CH63_1899 dsrH dsrH 2063241 2063528 - sulfur relay protein TusB/DsrH sulf_tusB_dsrH: sulfur relay protein TusB/DsrH~[P] COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1899 CH63_19 CH63_19 CH63_19 18121 18726 + outer membrane lipo%2C Slp family protein slp: outer membrane lipo%2C Slp family protein~[M] COG3065 Starvation-inducible outer membrane lipoprotein gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_19 CH63_190 CH63_190 lplA lplA 188720 189736 + lipoate-protein ligase A [H] COG0095 Lipoate-protein ligase A gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_190 CH63_1900 CH63_1900 tusC tusC 2063548 2063913 - sulfur relay protein TusC/DsrF sulf_tusC_dsrF: sulfur relay protein TusC/DsrF~[P] COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1900 CH63_1901 CH63_1901 CH63_1901 2063913 2064308 - dsrE/DsrF-like family protein [P] COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1901 CH63_1902 CH63_1902 CH63_1902 2064308 2065030 - sensory box protein [S] COG2964 Uncharacterized protein conserved in bacteria gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1902 CH63_1903 CH63_1903 CH63_1903 2065284 2066084 - domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1903 CH63_1904 CH63_1904 CH63_1904 2066399 2066617 + slyX family protein [S] COG2900 Uncharacterized protein conserved in bacteria gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1904 CH63_1905 CH63_1905 slyD slyD 2066838 2067425 - FKBP-type peptidyl-prolyl cis-trans isomerase slyD [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1905 CH63_1906 CH63_1906 CH63_1906 2067520 2067741 - hypothetical protein conserved hypothetical protein~[R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1906 CH63_1907 CH63_1907 CH63_1907 2067757 2069565 - transporter%2C monovalent cation:proton antiporter-2 family protein 2a37: transporter%2C monovalent cation:proton antiporter-2 family protein~[P] COG0475 Kef-type K+ transport systems%2C membrane components gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1907 CH63_1908 CH63_1908 CH63_1908 2069569 2070117 - NADPH-dependent FMN reductase family protein [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1908 CH63_1909 CH63_1909 CH63_1909 2070368 2070940 + ABC transporter family protein [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1909 CH63_191 CH63_191 CH63_191 189800 190510 + hypothetical protein conserved hypothetical protein~[S] COG0397 Uncharacterized conserved protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_191 CH63_1910 CH63_1910 CH63_1910 2070901 2072286 + ABC transporter family protein [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1910 CH63_1911 CH63_1911 CH63_1911 2072421 2073410 + glycosyltransferase like 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1911 CH63_1912 CH63_1912 CH63_1912 2073503 2074483 + glycosyltransferase 9 family protein [M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1912 CH63_1913 CH63_1913 tauD tauD 2074496 2075344 - alpha-ketoglutarate-dependent taurine dioxygenase [Q] COG2175 Probable taurine catabolism dioxygenase gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1913 CH63_1914 CH63_1914 CH63_1914 2075341 2076195 - binding--dependent transport system inner membrane component family protein [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1914 CH63_1915 CH63_1915 CH63_1915 2076192 2076959 - ABC transporter family protein [P] COG4525 ABC-type taurine transport system%2C ATPase component gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1915 CH63_1916 CH63_1916 tauA tauA 2076968 2078029 - taurine ABC transporter%2C periplasmic binding protein taurine_ABC_bnd: taurine ABC transporter%2C periplasmic binding protein~[P] COG4521 ABC-type taurine transport system%2C periplasmic component gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1916 CH63_1917 CH63_1917 CH63_1917 2078232 2078834 - lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1917 CH63_1918 CH63_1918 CH63_1918 2078936 2079916 + alpha/beta hydrolase family protein [R] COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1918 CH63_1919 CH63_1919 CH63_1919 2079913 2080149 + hypothetical protein conserved hypothetical protein~[S] COG3089 Uncharacterized protein conserved in bacteria gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1919 CH63_192 CH63_192 CH63_192 190535 191251 + hypothetical protein conserved hypothetical protein~[S] COG0397 Uncharacterized conserved protein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_192 CH63_1920 CH63_1920 CH63_1920 2080298 2081167 + phosphoribulokinase / Uridine kinase family protein [C] COG3954 Phosphoribulokinase gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1920 CH63_1921 CH63_1921 CH63_1921 2081345 2081776 - hypothetical protein conserved hypothetical protein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1921 CH63_1922 CH63_1922 CH63_1922 2081848 2082255 - osmC-like family protein [O] COG1765 Predicted redox protein%2C regulator of disulfide bond formation gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1922 CH63_1923 CH63_1923 CH63_1923 2082591 2083223 + bacterial regulatory s%2C crp family protein [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1923 CH63_1924 CH63_1924 CH63_1924 2083309 2085429 + integral membrane%2C YccS/YhfK family protein YCCS_YHJK: integral membrane%2C YccS/YhfK family protein~[S] COG1289 Predicted membrane protein gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1924 CH63_1925 CH63_1925 astC astC 2085655 2086872 - succinylornithine transaminase family protein arg_catab_astC: succinylornithine transaminase family protein~[E] COG4992 Ornithine/acetylornithine aminotransferase gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1925 CH63_1926 CH63_1926 CH63_1926 2087005 2087580 - glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein trpG_papA: glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein~[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1926 CH63_1927 CH63_1927 CH63_1927 2087823 2089298 - ftsK/SpoIIIE family protein [R] COG0433 Predicted ATPase gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1927 CH63_1928 CH63_1928 ppiA ppiA 2089690 2090259 - peptidyl-prolyl cis-trans isomerase A [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1928 CH63_1929 CH63_1929 CH63_1929 2090775 2092088 + hypothetical protein family 4 glycosyl hydrolase C-terminal domain protein~[G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases%2C family 4 of glycosyl hydrolases gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1929 CH63_193 CH63_193 CH63_193 191420 192466 - 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_193 CH63_1930 CH63_1930 CH63_1930 2092337 2093323 + helix-turn-helix family protein [K] COG1609 Transcriptional regulators gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1930 CH63_1931 CH63_1931 CH63_1931 2093430 2095490 - TonB-dependent copper receptor tonB-copper: TonB-dependent copper receptor~[P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1931 CH63_1932 CH63_1932 CH63_1932 2095976 2097160 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1932 CH63_1933 CH63_1933 CH63_1933 2097245 2098543 - amidohydrolase family protein [FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1933 CH63_1934 CH63_1934 nirB nirB 2098865 2101411 + nitrite reductase [NAD(P)H]%2C large subunit nitri_red_nirB: nitrite reductase [NAD(P)H]%2C large subunit~[C] COG1251 NAD(P)H-nitrite reductase gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1934 CH63_1935 CH63_1935 nirD nirD 2101408 2101734 + nitrite reductase [NAD(P)H] small subunit [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1935 CH63_1936 CH63_1936 CH63_1936 2101949 2102755 + putative nitrite transporter [P] COG2116 Formate/nitrite family of transporters gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1936 CH63_1937 CH63_1937 cobA cobA 2102843 2104255 + uroporphyrinogen-III C-methyltransferase cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase~[H] COG0007 Uroporphyrinogen-III methylase gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1937 CH63_1938 CH63_1938 trpS trpS 2104410 2105450 - tryptophan--tRNA ligase trpS: tryptophan--tRNA ligase~[J] COG0180 Tryptophanyl-tRNA synthetase gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1938 CH63_1939 CH63_1939 gph gph 2105452 2106150 - sugar (Glycoside-Pentoside-Hexuronide) transporter domain protein PGP_bact: phosphoglycolate phosphatase%2C bacterial~[R] COG0546 Predicted phosphatases gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1939 CH63_194 CH63_194 CH63_194 192623 193444 - putative phosphotransferase ydiA [S] COG1806 Uncharacterized protein conserved in bacteria gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_194 CH63_1940 CH63_1940 rpe rpe 2106143 2106820 - ribulose-phosphate 3-epimerase rpe: ribulose-phosphate 3-epimerase~[G] COG0036 Pentose-5-phosphate-3-epimerase gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1940 CH63_1941 CH63_1941 dam dam 2107123 2107938 - DNA adenine methylase family protein dam: DNA adenine methylase family protein~[L] COG0338 Site-specific DNA methylase gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1941 CH63_1942 CH63_1942 CH63_1942 2108022 2109011 - sporulation related domain protein [S] COG3266 Uncharacterized protein conserved in bacteria gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1942 CH63_1943 CH63_1943 aroB aroB 2109265 2110353 - 3-dehydroquinate synthase aroB: 3-dehydroquinate synthase~[E] COG0337 3-dehydroquinate synthetase gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1943 CH63_1944 CH63_1944 aroK aroK 2110410 2110931 - shikimate kinase 1 [E] COG0703 Shikimate kinase gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1944 CH63_1945 CH63_1945 pilQ pilQ 2111280 2112632 - type IV pilus secretin PilQ family protein IV_pilus_PilQ: type IV pilus secretin PilQ family protein~[U] COG4796 Type II secretory pathway%2C component HofQ gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1945 CH63_1946 CH63_1946 CH63_1946 2112831 2113190 - hypothetical protein conserved hypothetical protein gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1946 CH63_1947 CH63_1947 CH63_1947 2113225 2113851 - hypothetical protein conserved hypothetical protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1947 CH63_1948 CH63_1948 CH63_1948 2113799 2114404 - fimbrial assembly family protein [NU] COG3166 Tfp pilus assembly protein PilN gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1948 CH63_1949 CH63_1949 CH63_1949 2114404 2115300 - putative ATPases of the HSP70 class involved in cell division gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1949 CH63_195 CH63_195 ppsA ppsA 193781 196165 + phosphoenolpyruvate synthase PEP_synth: phosphoenolpyruvate synthase~[G] COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_195 CH63_1950 CH63_1950 CH63_1950 2115420 2117975 + penicillin-binding%2C 1A family protein PBP_1a_fam: penicillin-binding%2C 1A family protein~[M] COG5009 Membrane carboxypeptidase/penicillin-binding protein gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1950 CH63_1951 CH63_1951 CH63_1951 2118111 2118656 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1951 CH63_1952 CH63_1952 CH63_1952 2118769 2118963 - hypothetical protein conserved hypothetical protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1952 CH63_1953 CH63_1953 CH63_1953 2119243 2121390 + intracellular growth attenuator IgaA family protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1953 CH63_1954 CH63_1954 CH63_1954 2121534 2122214 + HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1954 CH63_1955 CH63_1955 CH63_1955 2122243 2122650 + S4 domain protein [J] COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1955 CH63_1956 CH63_1956 hslO hslO 2122813 2123694 + 33 kDa chaperonin [O] COG1281 Disulfide bond chaperones of the HSP33 family gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1956 CH63_1957 CH63_1957 pckA pckA 2123891 2125510 + phosphoenolpyruvate carboxykinase pckA: phosphoenolpyruvate carboxykinase~[C] COG1866 Phosphoenolpyruvate carboxykinase (ATP) gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1957 CH63_1958 CH63_1958 CH63_1958 2125645 2126997 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1958 CH63_1959 CH63_1959 ompR ompR 2126994 2127713 - transcriptional regulatory protein ompR [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1959 CH63_196 CH63_196 CH63_196 196764 197867 - hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_196 CH63_1960 CH63_1960 greB greB 2127849 2128364 - transcription elongation factor GreB greB: transcription elongation factor GreB~[K] COG0782 Transcription elongation factor gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1960 CH63_1961 CH63_1961 CH63_1961 2128898 2131273 + S1 RNA binding domain protein [K] COG2183 Transcriptional accessory protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1961 CH63_1962 CH63_1962 feoA feoA 2131797 2132024 + ferrous iron transport protein A [P] COG1918 Fe2+ transport system protein A gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1962 CH63_1963 CH63_1963 feoB feoB 2132116 2134431 + ferrous iron transport protein B feoB: ferrous iron transport protein B~[P] COG0370 Fe2+ transport system protein B gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1963 CH63_1964 CH63_1964 feoC feoC 2134467 2134724 + ferrous iron transport protein C gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1964 CH63_1965 CH63_1965 CH63_1965 2134862 2135131 - hypothetical protein conserved hypothetical protein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1965 CH63_1966 CH63_1966 bioH bioH 2135301 2136077 - pimelyl-[acyl-carrier protein] methyl ester esterase bioH: pimelyl-[acyl-carrier protein] methyl ester esterase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1966 CH63_1967 CH63_1967 CH63_1967 2136164 2136865 + phosphoribosyl transferase domain protein [R] COG1040 Predicted amidophosphoribosyltransferases gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1967 CH63_1968 CH63_1968 nfuA nfuA 2136925 2137500 + fe/S biogenesis protein nfuA [O] COG0694 Thioredoxin-like proteins and domains gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1968 CH63_1969 CH63_1969 malQ malQ 2137829 2139925 - 4-alpha-glucanotransferase malQ: 4-alpha-glucanotransferase~[G] COG1640 4-alpha-glucanotransferase gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1969 CH63_197 CH63_197 CH63_197 198488 201544 + hypothetical protein FAD linked oxidase%2C C-terminal domain protein~[C] COG0277 FAD/FMN-containing dehydrogenases gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_197 CH63_1970 CH63_1970 glgP glgP 2139938 2141986 - glycogen/starch/alpha-glucan phosphorylases family protein P_ylase: glycogen/starch/alpha-glucan phosphorylases family protein~[G] COG0058 Glucan phosphorylase gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1970 CH63_1971 CH63_1971 malP malP 2141992 2142342 - phosphorylase domain protein [G] COG0058 Glucan phosphorylase gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1971 CH63_1972 CH63_1972 CH63_1972 2142660 2145371 + bacterial regulatory s%2C luxR family protein [K] COG2909 ATP-dependent transcriptional regulator gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1972 CH63_1973 CH63_1973 CH63_1973 2145746 2146075 + rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1973 CH63_1974 CH63_1974 glpG glpG 2146093 2146929 + rhomboid family protease GlpG rhombo_GlpG: rhomboid family protease GlpG~[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1974 CH63_1975 CH63_1975 CH63_1975 2146964 2147722 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1975 CH63_1976 CH63_1976 CH63_1976 2147915 2148430 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1976 CH63_1977 CH63_1977 CH63_1977 2149159 2149995 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1977 CH63_1978 CH63_1978 CH63_1978 2148484 2149269 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1978 CH63_1979 CH63_1979 CH63_1979 2150011 2150790 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1979 CH63_198 CH63_198 CH63_198 201666 202082 + hypothetical protein conserved hypothetical protein~[Q] COG2050 Uncharacterized protein%2C possibly involved in aromatic compounds catabolism gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_198 CH63_1980 CH63_1980 CH63_1980 2150790 2151812 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1980 CH63_1981 CH63_1981 CH63_1981 2151826 2152344 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1981 CH63_1982 CH63_1982 CH63_1982 2152344 2152784 - 25-like lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1982 CH63_1983 CH63_1983 CH63_1983 2152791 2154272 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1983 CH63_1984 CH63_1984 CH63_1984 2154340 2154837 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1984 CH63_1985 CH63_1985 CH63_1985 2155361 2155879 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1985 CH63_1986 CH63_1986 CH63_1986 2156031 2156441 - hypothetical protein conserved hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1986 CH63_1987 CH63_1987 CH63_1987 2156780 2157691 - maltose operon periplasmic family protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1987 CH63_1988 CH63_1988 lamB lamB 2157932 2159203 - maltoporin [G] COG4580 Maltoporin (phage lambda and maltose receptor) gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1988 CH63_1989 CH63_1989 malK malK 2159274 2160383 - maltose/maltodextrin import ATP-binding protein MalK [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1989 CH63_199 CH63_199 CH63_199 202677 203048 + iron-sulfur cluster assembly accessory family protein [S] COG0316 Uncharacterized conserved protein gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_199 CH63_1990 CH63_1990 CH63_1990 2160387 2160623 - putative glycosidase gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1990 CH63_1991 CH63_1991 malE malE 2161212 2162423 + maltose-binding periplasmic protein [G] COG2182 Maltose-binding periplasmic proteins/domains gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1991 CH63_1992 CH63_1992 CH63_1992 2162610 2164187 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1992 CH63_1993 CH63_1993 CH63_1993 2164201 2165091 + binding--dependent transport system inner membrane component family protein [G] COG3833 ABC-type maltose transport systems%2C permease component gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1993 CH63_1994 CH63_1994 CH63_1994 2165234 2165641 - phosphate-starvation-inducible E family protein [S] COG3223 Predicted membrane protein gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1994 CH63_1995 CH63_1995 pgi pgi 2165776 2167422 - glucose-6-phosphate isomerase [G] COG0166 Glucose-6-phosphate isomerase gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1995 CH63_1996 CH63_1996 CH63_1996 2167792 2169177 + aspartate kinase%2C monofunctional class asp_kin_monofn: aspartate kinase%2C monofunctional class~[E] COG0527 Aspartokinases gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1996 CH63_1997 CH63_1997 shlB shlB 2169658 2170002 + hemolysin transporter protein shlB [U] COG2831 Hemolysin activation/secretion protein gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1997 CH63_1998 CH63_1998 shlB shlB 2169968 2171431 + hemolysin transporter protein shlB [U] COG2831 Hemolysin activation/secretion protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1998 CH63_1999 CH63_1999 shlA shlA 2171501 2176408 + hemolysin [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_1999 CH63_2 CH63_2 ruvA ruvA 550 1164 + Holliday junction DNA helicase RuvA ruvA: Holliday junction DNA helicase RuvA~[L] COG0632 Holliday junction resolvasome%2C DNA-binding subunit gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2 CH63_20 CH63_20 CH63_20 19369 21057 + AMP-binding enzyme family protein [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_20 CH63_200 CH63_200 sufB sufB 203063 204574 + FeS assembly protein SufB sufB: FeS assembly protein SufB~[O] COG0719 ABC-type transport system involved in Fe-S cluster assembly%2C permease component gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_200 CH63_2000 CH63_2000 metH metH 2176504 2180199 - methionine synthase metH: methionine synthase~[E] COG1410 Methionine synthase I%2C cobalamin-binding domain gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2000 CH63_2001 CH63_2001 CH63_2001 2180414 2180761 + iclR helix-turn-helix domain protein [K] COG1414 Transcriptional regulator gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2001 CH63_2002 CH63_2002 CH63_2002 2180761 2181258 + bacterial transcriptional regulator family protein [K] COG1414 Transcriptional regulator gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2002 CH63_2003 CH63_2003 CH63_2003 2181378 2183105 - isocitrate dehydrogenase kinase/phosphatase family protein [T] COG4579 Isocitrate dehydrogenase kinase/phosphatase gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2003 CH63_2004 CH63_2004 aceA aceA 2183361 2184668 - isocitrate lyase isocit_lyase: isocitrate lyase~[C] COG2224 Isocitrate lyase gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2004 CH63_2005 CH63_2005 aceB aceB 2184715 2186313 - malate synthase A malate_syn_A: malate synthase A~[C] COG2225 Malate synthase gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2005 CH63_2006 CH63_2006 metA metA 2186733 2187662 - homoserine O-succinyltransferase metA: homoserine O-succinyltransferase~[E] COG1897 Homoserine trans-succinylase gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2006 CH63_2007 CH63_2007 CH63_2007 2187730 2188002 + hypothetical protein conserved hypothetical protein gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2007 CH63_2008 CH63_2008 CH63_2008 2188402 2188514 - 5S ribosomal RNA rRNA gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2008 CH63_2009 CH63_2009 CH63_2009 2188558 2188633 - tRNA-Thr tRNA gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2009 CH63_201 CH63_201 sufC sufC 204760 205506 + FeS assembly ATPase SufC sufC: FeS assembly ATPase SufC~[O] COG0396 ABC-type transport system involved in Fe-S cluster assembly%2C ATPase component gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_201 CH63_2010 CH63_2010 CH63_2010 2188649 2188761 - 5S ribosomal RNA rRNA gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2010 CH63_2012 CH63_2012 CH63_2012 2188875 2191777 - 23S ribosomal RNA rRNA gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2012 CH63_2013 CH63_2013 CH63_2013 2192033 2192108 - tRNA-Glu tRNA gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2013 CH63_2014 CH63_2014 CH63_2014 2192251 2193779 - 16S ribosomal RNA rRNA gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2014 CH63_2015 CH63_2015 CH63_2015 2194347 2195036 + bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2015 CH63_2016 CH63_2016 rbsR rbsR 2196537 2196740 - ribose operon repressor [K] COG1609 Transcriptional regulators gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2016 CH63_2017 CH63_2017 CH63_2017 2195116 2196540 + drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein efflux_EmrB: drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2017 CH63_2018 CH63_2018 rbsK rbsK 2196760 2197686 - ribokinase D_ribokin_bact: ribokinase~[G] COG0524 Sugar kinases%2C ribokinase family gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2018 CH63_2019 CH63_2019 CH63_2019 2197737 2198156 - rbsD / FucU transport family protein [G] COG1869 ABC-type ribose transport system%2C auxiliary component gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2019 CH63_202 CH63_202 sufD sufD 205481 206806 + FeS assembly protein SufD sufD: FeS assembly protein SufD~[O] COG0719 ABC-type transport system involved in Fe-S cluster assembly%2C permease component gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_202 CH63_2020 CH63_2020 kup kup 2198361 2200229 - potassium uptake protein kup: potassium uptake protein~[P] COG3158 K+ transporter gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2020 CH63_2021 CH63_2021 CH63_2021 2200503 2202056 + AAA domain family protein [R] COG0714 MoxR-like ATPases gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2021 CH63_2022 CH63_2022 CH63_2022 2202060 2203526 + VWA domain containing CoxE-like family protein [R] COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2022 CH63_2023 CH63_2023 asnA asnA 2203625 2204617 - aspartate--ammonia ligase asnA: aspartate--ammonia ligase~[E] COG2502 Asparagine synthetase A gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2023 CH63_2024 CH63_2024 CH63_2024 2204787 2205248 + asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2024 CH63_2025 CH63_2025 CH63_2025 2205341 2205781 + flavodoxin family protein [C] COG0716 Flavodoxins gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2025 CH63_2026 CH63_2026 gidA gidA 2206162 2208051 + tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2026 CH63_2027 CH63_2027 rsmG rsmG 2208197 2208817 + 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG~[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2027 CH63_2028 CH63_2028 CH63_2028 2209484 2209867 + ATP synthase I chain family protein [C] COG3312 F0F1-type ATP synthase%2C subunit I gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2028 CH63_2029 CH63_2029 atpB atpB 2209907 2210731 + ATP synthase F0%2C A subunit ATP_synt_6_or_A: ATP synthase F0%2C A subunit~[C] COG0356 F0F1-type ATP synthase%2C subunit a gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2029 CH63_203 CH63_203 sufS sufS 206803 208023 + cysteine desulfurase%2C SufS family protein sufS: cysteine desulfurase%2C SufS family protein~[E] COG0520 Selenocysteine lyase gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_203 CH63_2030 CH63_2030 atpE atpE 2210781 2211020 + ATP synthase F0%2C C subunit ATP_synt_c: ATP synthase F0%2C C subunit~[C] COG0636 F0F1-type ATP synthase%2C subunit c/Archaeal/vacuolar-type H+-ATPase%2C subunit K gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2030 CH63_2031 CH63_2031 atpF atpF 2211082 2211552 + ATP synthase F0%2C B subunit ATP_synt_b: ATP synthase F0%2C B subunit~[C] COG0711 F0F1-type ATP synthase%2C subunit b gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2031 CH63_2032 CH63_2032 atpH atpH 2211567 2212100 + ATP synthase F1%2C delta subunit ATP_synt_delta: ATP synthase F1%2C delta subunit~[C] COG0712 F0F1-type ATP synthase%2C delta subunit (mitochondrial oligomycin sensitivity protein) gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2032 CH63_2033 CH63_2033 atpA atpA 2212115 2213656 + ATP synthase F1%2C alpha subunit atpA: ATP synthase F1%2C alpha subunit~[C] COG0056 F0F1-type ATP synthase%2C alpha subunit gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2033 CH63_2034 CH63_2034 atpG atpG 2213718 2214581 + ATP synthase F1%2C gamma subunit ATPsyn_F1gamma: ATP synthase F1%2C gamma subunit~[C] COG0224 F0F1-type ATP synthase%2C gamma subunit gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2034 CH63_2035 CH63_2035 atpD atpD 2214737 2216119 + ATP synthase F1%2C beta subunit atpD: ATP synthase F1%2C beta subunit~[C] COG0055 F0F1-type ATP synthase%2C beta subunit gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2035 CH63_2036 CH63_2036 atpC atpC 2216141 2216563 + ATP synthase F1%2C epsilon subunit ATP_synt_epsi: ATP synthase F1%2C epsilon subunit~[C] COG0355 F0F1-type ATP synthase%2C epsilon subunit (mitochondrial delta subunit) gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2036 CH63_2037 CH63_2037 glmU glmU 2217184 2218554 + UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase~[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2037 CH63_2038 CH63_2038 glmS glmS 2218755 2220584 + glutamine-fructose-6-phosphate transaminase glmS: glutamine-fructose-6-phosphate transaminase~[M] COG0449 Glucosamine 6-phosphate synthetase%2C contains amidotransferase and phosphosugar isomerase domains gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2038 CH63_2039 CH63_2039 pstS pstS 2221067 2222107 + phosphate ABC transporter%2C phosphate-binding protein PstS 3a0107s03: phosphate ABC transporter%2C phosphate-binding protein PstS~[P] COG0226 ABC-type phosphate transport system%2C periplasmic component gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2039 CH63_204 CH63_204 sufE sufE 208112 208534 + cysteine desulfuration protein sufE [R] COG2166 SufE protein probably involved in Fe-S center assembly gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_204 CH63_2040 CH63_2040 pstC pstC 2222336 2223292 + phosphate ABC transporter%2C permease protein PstC phosphate_pstC: phosphate ABC transporter%2C permease protein PstC~[P] COG0573 ABC-type phosphate transport system%2C permease component gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2040 CH63_2041 CH63_2041 pstA pstA 2223294 2224181 + phosphate ABC transporter%2C permease protein PstA 3a0107s02c: phosphate ABC transporter%2C permease protein PstA~[P] COG0581 ABC-type phosphate transport system%2C permease component gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2041 CH63_2042 CH63_2042 pstB pstB 2224262 2225038 + phosphate ABC transporter%2C ATP-binding protein 3a0107s01c2: phosphate ABC transporter%2C ATP-binding protein~[P] COG1117 ABC-type phosphate transport system%2C ATPase component gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2042 CH63_2043 CH63_2043 phoU phoU 2225126 2225848 + phosphate transport system regulatory protein PhoU phoU_full: phosphate transport system regulatory protein PhoU~[P] COG0704 Phosphate uptake regulator gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2043 CH63_2044 CH63_2044 CH63_2044 2226144 2226815 + polymer-forming cytoskeletal family protein [M] COG1664 Integral membrane protein CcmA involved in cell shape determination gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2044 CH63_2045 CH63_2045 CH63_2045 2227035 2227889 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2045 CH63_2046 CH63_2046 CH63_2046 2228072 2228809 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2046 CH63_2047 CH63_2047 CH63_2047 2228811 2229566 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2047 CH63_2048 CH63_2048 CH63_2048 2229601 2230269 - HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2048 CH63_2049 CH63_2049 CH63_2049 2230762 2232090 + permease family protein [R] COG2252 Permeases gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2049 CH63_205 CH63_205 CH63_205 208805 209869 + L%2CD-transpeptidase catalytic domain protein [S] COG1376 Uncharacterized protein conserved in bacteria gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_205 CH63_2050 CH63_2050 CH63_2050 2232635 2233255 + hypothetical protein conserved hypothetical protein gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2050 CH63_2051 CH63_2051 CH63_2051 2233317 2233598 + putative membrane protein gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2051 CH63_2052 CH63_2052 CH63_2052 2234060 2235259 - NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein [S] COG3007 Uncharacterized paraquat-inducible protein B gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2052 CH63_2053 CH63_2053 trmE trmE 2235445 2236809 - tRNA modification GTPase TrmE mnmE_trmE_thdF: tRNA modification GTPase TrmE~[R] COG0486 Predicted GTPase gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2053 CH63_2054 CH63_2054 yidC yidC 2236952 2238592 - membrane protein insertase yidC_nterm: membrane protein insertase%2C YidC/Oxa1 family%2C N-terminal domain~[U] COG0706 Preprotein translocase subunit YidC gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2054 CH63_2055 CH63_2055 CH63_2055 2238595 2238852 - putative membrane protein insertion efficiency factor [S] COG0759 Uncharacterized conserved protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2055 CH63_2056 CH63_2056 rnpA rnpA 2238816 2239142 - ribonuclease P protein component rnpA: ribonuclease P protein component~[J] COG0594 RNase P protein component gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2056 CH63_2057 CH63_2057 rpmH rpmH 2239194 2239334 - ribosomal protein L34 rpmH_bact: ribosomal protein L34~[J] COG0230 Ribosomal protein L34 gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2057 CH63_2058 CH63_2058 CH63_2058 2239711 2239851 - hypothetical protein gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2058 CH63_2059 CH63_2059 dnaA dnaA 2240044 2241432 + chromosomal replication initiator protein DnaA dnaA: chromosomal replication initiator protein DnaA~[L] COG0593 ATPase involved in DNA replication initiation gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2059 CH63_206 CH63_206 CH63_206 210451 211230 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_206 CH63_2060 CH63_2060 dnaN dnaN 2241437 2242537 + DNA polymerase III%2C beta subunit dnan: DNA polymerase III%2C beta subunit~[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2060 CH63_2061 CH63_2061 recF recF 2242710 2243795 + DNA replication and repair RecF family protein recf: DNA replication and repair RecF family protein~[L] COG1195 Recombinational DNA repair ATPase (RecF pathway) gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2061 CH63_2062 CH63_2062 gyrB gyrB 2243815 2246229 + DNA gyrase%2C B subunit gyrB: DNA gyrase%2C B subunit~[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C B subunit gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2062 CH63_2063 CH63_2063 CH63_2063 2246445 2247254 + HAD hydrolase%2C IIB family protein HAD-SF-IIB: HAD hydrolase%2C IIB family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2063 CH63_2064 CH63_2064 CH63_2064 2247645 2248430 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2064 CH63_2065 CH63_2065 CH63_2065 2247485 2247706 + hypothetical protein conserved hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2065 CH63_2066 CH63_2066 CH63_2066 2248484 2248999 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2066 CH63_2067 CH63_2067 CH63_2067 2249206 2250159 - ornithine cyclodeaminase/mu-crystallin family protein [E] COG2423 Predicted ornithine cyclodeaminase%2C mu-crystallin homolog gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2067 CH63_2068 CH63_2068 CH63_2068 2250153 2251115 - pyridoxal-phosphate dependent enzyme family protein [E] COG1171 Threonine dehydratase gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2068 CH63_2069 CH63_2069 CH63_2069 2251323 2251634 + hypothetical protein conserved hypothetical protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2069 CH63_207 CH63_207 CH63_207 211230 212252 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_207 CH63_2070 CH63_2070 CH63_2070 2251624 2251938 + hypothetical protein dipeptidyl peptidase IV (DPP IV) N-terminal region family protein gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2070 CH63_2071 CH63_2071 CH63_2071 2251978 2252316 - hypothetical protein conserved hypothetical protein~[R] COG5645 Predicted periplasmic lipoprotein gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2071 CH63_2072 CH63_2072 ibpA ibpA 2252684 2253097 + small heat shock protein ibpA [O] COG0071 Molecular chaperone (small heat shock protein) gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2072 CH63_2073 CH63_2073 CH63_2073 2253378 2253842 + hsp20/alpha crystallin family protein [O] COG0071 Molecular chaperone (small heat shock protein) gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2073 CH63_2074 CH63_2074 CH63_2074 2254215 2255873 + AspT/YidE/YbjL antiporter duplication domain protein yidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain protein~[R] COG2985 Predicted permease gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2074 CH63_2075 CH63_2075 CH63_2075 2255986 2257251 - aminotransferase class I and II family protein [E] COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2075 CH63_2076 CH63_2076 CH63_2076 2257706 2258149 - putative membrane protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2076 CH63_2077 CH63_2077 CH63_2077 2258564 2260627 - alpha amylase%2C catalytic domain protein [G] COG0366 Glycosidases gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2077 CH63_2078 CH63_2078 CH63_2078 2260916 2261896 - D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2078 CH63_2079 CH63_2079 CH63_2079 2262415 2263059 + putative transcriptional regulator protein [K] COG2345 Predicted transcriptional regulator gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2079 CH63_208 CH63_208 CH63_208 212309 212590 + putative transposase gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_208 CH63_2080 CH63_2080 CH63_2080 2263190 2263849 - glycine zipper 2TM domain protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2080 CH63_2081 CH63_2081 CH63_2081 2264207 2264662 - acetyltransferase family protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2081 CH63_2082 CH63_2082 tag tag 2264659 2265225 - DNA-3-methyladenine glycosylase I family protein tag: DNA-3-methyladenine glycosylase I family protein~[L] COG2818 3-methyladenine DNA glycosylase gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2082 CH63_2083 CH63_2083 CH63_2083 2265294 2265428 - hypothetical protein gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2083 CH63_2084 CH63_2084 glyQ glyQ 2265559 2266473 + glycyl-tRNA synthetase alpha subunit [J] COG0752 Glycyl-tRNA synthetase%2C alpha subunit gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2084 CH63_2085 CH63_2085 glyS glyS 2266483 2268552 + glycine--tRNA ligase%2C beta subunit glyS: glycine--tRNA ligase%2C beta subunit~[J] COG0751 Glycyl-tRNA synthetase%2C beta subunit gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2085 CH63_2086 CH63_2086 CH63_2086 2269025 2269744 + hypothetical protein conserved hypothetical protein gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2086 CH63_2087 CH63_2087 mtlA mtlA 2270394 2272325 + PTS system mannitol-specific EIICBA component [G] COG2213 Phosphotransferase system%2C mannitol-specific IIBC component gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2087 CH63_2088 CH63_2088 CH63_2088 2272462 2273625 + mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2088 CH63_2089 CH63_2089 mtlR mtlR 2273832 2274386 + mannitol operon repressor [K] COG3722 Transcriptional regulator gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2089 CH63_209 CH63_209 lpp lpp 212901 213137 - major outer membrane lipoprotein Lpp [M] COG4238 Murein lipoprotein gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_209 CH63_2090 CH63_2090 CH63_2090 2274465 2274587 + hypothetical protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2090 CH63_2091 CH63_2091 CH63_2091 2274635 2274991 + hypothetical protein conserved hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2091 CH63_2092 CH63_2092 CH63_2092 2275160 2275636 - electron transfer DM13 family protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2092 CH63_2093 CH63_2093 CH63_2093 2275997 2276092 + hypothetical protein conserved hypothetical protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2093 CH63_2094 CH63_2094 CH63_2094 2276168 2276500 - hypothetical protein conserved hypothetical protein gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2094 CH63_2095 CH63_2095 CH63_2095 2276690 2278639 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2095 CH63_2096 CH63_2096 CH63_2096 2278983 2279606 - iron/manganese superoxide dismutase%2C alpha-hairpin domain protein [P] COG0605 Superoxide dismutase gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2096 CH63_2097 CH63_2097 CH63_2097 2280042 2280866 - formate dehydrogenase family accessory protein FdhD fdhD_narQ: formate dehydrogenase family accessory protein FdhD~[C] COG1526 Uncharacterized protein required for formate dehydrogenase activity gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2097 CH63_2098 CH63_2098 CH63_2098 2281063 2281650 + molybdopterin oxidoreductase Fe4S4 domain protein [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2098 CH63_2099 CH63_2099 fdnG fdnG 2281699 2284110 + formate dehydrogenase-N alpha subunit formate-DH-alph: formate dehydrogenase-N alpha subunit~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2099 CH63_21 CH63_21 rnd rnd 21217 22338 + ribonuclease D rnd: ribonuclease D~[J] COG0349 Ribonuclease D gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_21 CH63_210 CH63_210 pyk pyk 213458 214870 - pyruvate kinase pyruv_kin: pyruvate kinase~[G] COG0469 Pyruvate kinase gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_210 CH63_2100 CH63_2100 fdxH fdxH 2284123 2285094 + formate dehydrogenase%2C beta subunit FDH-beta: formate dehydrogenase%2C beta subunit~[C] COG0437 Fe-S-cluster-containing hydrogenase components 1 gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2100 CH63_2101 CH63_2101 CH63_2101 2285091 2285765 + formate dehydrogenase%2C gamma subunit formate-DH-gamm: formate dehydrogenase%2C gamma subunit~[C] COG2864 Cytochrome b subunit of formate dehydrogenase gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2101 CH63_2102 CH63_2102 fdhE fdhE 2285765 2286694 + formate dehydrogenase accessory protein FdhE fdhE: formate dehydrogenase accessory protein FdhE~[O] COG3058 Uncharacterized protein involved in formate dehydrogenase formation gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2102 CH63_2103 CH63_2103 selA selA 2286878 2288266 + L-seryl-tRNA(Sec) selenium transferase selA: L-seryl-tRNA(Sec) selenium transferase~[E] COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2103 CH63_2104 CH63_2104 CH63_2104 2288263 2290214 + selB%3B50S ribosome-binding GTPase family protein%3Bselenocysteine-specific translation elongation factor pseudogene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2104 CH63_2106 CH63_2106 CH63_2106 2290221 2290685 - tn3 transposase DDE domain protein [L] COG4644 Transposase and inactivated derivatives%2C TnpA family gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2106 CH63_2107 CH63_2107 CH63_2107 2290974 2291306 + hypothetical protein conserved hypothetical protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2107 CH63_2108 CH63_2108 CH63_2108 2291320 2291901 - hypothetical protein conserved hypothetical protein gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2108 CH63_2109 CH63_2109 CH63_2109 2291980 2292138 - hypothetical protein conserved hypothetical protein gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2109 CH63_211 CH63_211 CH63_211 215446 215522 - tRNA-Val tRNA gene208 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_211 CH63_2110 CH63_2110 CH63_2110 2292259 2292462 + hypothetical protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2110 CH63_2111 CH63_2111 mdfA mdfA 2292611 2293840 - multidrug transporter MdfA [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2111 CH63_2112 CH63_2112 CH63_2112 2294313 2295098 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2112 CH63_2113 CH63_2113 CH63_2113 2295152 2295667 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2113 CH63_2114 CH63_2114 CH63_2114 2296030 2297022 + acyltransferase family protein [S] COG3274 Uncharacterized protein conserved in bacteria gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2114 CH63_2115 CH63_2115 CH63_2115 2297904 2298461 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2115 CH63_2116 CH63_2116 CH63_2116 2298576 2300366 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2116 CH63_2117 CH63_2117 CH63_2117 2300392 2301027 + outer membrane usher family protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2117 CH63_2118 CH63_2118 CH63_2118 2301120 2301887 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2118 CH63_2119 CH63_2119 CH63_2119 2301926 2302912 + fimbrial family protein gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2119 CH63_212 CH63_212 CH63_212 215582 215658 - tRNA-Val tRNA gene209 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_212 CH63_2120 CH63_2120 xylB xylB 2303011 2304465 - xylulokinase xylB: xylulokinase~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2120 CH63_2121 CH63_2121 xylA xylA 2304589 2305908 - xylose isomerase xylose_isom_A: xylose isomerase~[G] COG2115 Xylose isomerase gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2121 CH63_2122 CH63_2122 xylF xylF 2306371 2307366 + D-xylose ABC transporter%2C D-xylose-binding protein xylF: D-xylose ABC transporter%2C D-xylose-binding protein~[G] COG4213 ABC-type xylose transport system%2C periplasmic component gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2122 CH63_2123 CH63_2123 ccmA ccmA 2307574 2309106 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2123 CH63_2124 CH63_2124 CH63_2124 2309093 2310277 + branched-chain amino acid transport system / permease component family protein [G] COG4214 ABC-type xylose transport system%2C permease component gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2124 CH63_2125 CH63_2125 CH63_2125 2310367 2311560 + helix-turn-helix domain protein [K] COG1609 Transcriptional regulators gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2125 CH63_2126 CH63_2126 CH63_2126 2311690 2311780 + tRNA-Sec tRNA-SeC(p) tRNA gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2126 CH63_2127 CH63_2127 CH63_2127 2311946 2313139 + phage integrase family protein [L] COG0582 Integrase gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2127 CH63_2128 CH63_2128 CH63_2128 2313126 2314505 + hypothetical protein conserved hypothetical protein gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2128 CH63_2129 CH63_2129 CH63_2129 2314773 2315018 - ogr/Delta-like zinc finger family protein gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2129 CH63_213 CH63_213 CH63_213 215901 217274 - MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_213 CH63_2130 CH63_2130 CH63_2130 2315192 2315485 - putative transposase gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2130 CH63_2131 CH63_2131 CH63_2131 2315485 2315970 - transposase DDE domain protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2131 CH63_2132 CH63_2132 CH63_2132 2316163 2316525 - helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2132 CH63_2133 CH63_2133 hth hth 2317465 2317650 + helix-turn-helix XRE family protein gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2133 CH63_2134 CH63_2134 CH63_2134 2318383 2319141 - ABC transporter family protein [P] COG4604 ABC-type enterochelin transport system%2C ATPase component gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2134 CH63_2135 CH63_2135 CH63_2135 2317823 2318386 + virulence RhuM family protein [R] COG3943 Virulence protein gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2135 CH63_2136 CH63_2136 CH63_2136 2319138 2320145 - fecCD transport family protein [P] COG4605 ABC-type enterochelin transport system%2C permease component gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2136 CH63_2137 CH63_2137 CH63_2137 2320135 2321094 - fecCD transport family protein [P] COG4606 ABC-type enterochelin transport system%2C permease component gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2137 CH63_2138 CH63_2138 CH63_2138 2321104 2322057 - periplasmic binding family protein [P] COG4607 ABC-type enterochelin transport system%2C periplasmic component gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2138 CH63_2139 CH63_2139 CH63_2139 2322580 2323824 - ATP-grasp domain protein [I] COG0439 Biotin carboxylase gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2139 CH63_214 CH63_214 ribE ribE 217523 218179 + riboflavin synthase%2C alpha subunit ribE: riboflavin synthase%2C alpha subunit~[H] COG0307 Riboflavin synthase alpha chain gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_214 CH63_2140 CH63_2140 CH63_2140 2323826 2324755 - eamA-like transporter family protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2140 CH63_2141 CH63_2141 CH63_2141 2324838 2325404 - phosphoribosyl transferase domain protein [F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2141 CH63_2142 CH63_2142 CH63_2142 2325401 2326345 - pyridoxal-phosphate dependent enzyme family protein [E] COG0031 Cysteine synthase gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2142 CH63_2143 CH63_2143 hutU hutU 2327072 2328763 + urocanate hydratase hutU: urocanate hydratase~[E] COG2987 Urocanate hydratase gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2143 CH63_2144 CH63_2144 hutH hutH 2328760 2330292 + histidine ammonia-lyase hutH: histidine ammonia-lyase~[E] COG2986 Histidine ammonia-lyase gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2144 CH63_2145 CH63_2145 CH63_2145 2330710 2332113 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2145 CH63_2146 CH63_2146 CH63_2146 2332581 2334044 + alpha/beta hydrolase family protein [I] COG2267 Lysophospholipase gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2146 CH63_2147 CH63_2147 CH63_2147 2334573 2336264 + hypothetical protein conserved hypothetical protein~[R] COG2194 Predicted membrane-associated%2C metal-dependent hydrolase gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2147 CH63_2148 CH63_2148 uhpA uhpA 2336380 2336970 + transcriptional regulatory protein uhpA [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2148 CH63_2149 CH63_2149 CH63_2149 2337391 2338497 + histidine kinase family protein [T] COG3851 Signal transduction histidine kinase%2C glucose-6-phosphate specific gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2149 CH63_215 CH63_215 cfa cfa 218230 219381 - cyclopropane-fatty-acyl-phospholipid synthase [M] COG2230 Cyclopropane fatty acid synthase and related methyltransferases gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_215 CH63_2150 CH63_2150 CH63_2150 2338592 2339923 + phosphoglycerate transporter family protein 2A0104: phosphoglycerate transporter family protein~[G] COG2271 Sugar phosphate permease gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2150 CH63_2151 CH63_2151 CH63_2151 2340040 2340116 + tRNA-Pro tRNA gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2151 CH63_2152 CH63_2152 CH63_2152 2340297 2340755 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2152 CH63_2153 CH63_2153 CH63_2153 2341139 2342530 + hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2153 CH63_2154 CH63_2154 CH63_2154 2342639 2344402 + hemolysin secretion/activation ShlB/FhaC/HecB family protein [U] COG2831 Hemolysin activation/secretion protein gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2154 CH63_2155 CH63_2155 CH63_2155 2344462 2344668 + hypothetical protein gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2155 CH63_2156 CH63_2156 CH63_2156 2345071 2346678 + bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2156 CH63_2157 CH63_2157 CH63_2157 2346961 2347908 + binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2157 CH63_2158 CH63_2158 CH63_2158 2347990 2348892 + binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2158 CH63_2159 CH63_2159 CH63_2159 2348906 2349886 + hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2159 CH63_216 CH63_216 CH63_216 219861 221063 - drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_216 CH63_2160 CH63_2160 CH63_2160 2349883 2350959 + hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[E] COG4608 ABC-type oligopeptide transport system%2C ATPase component gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2160 CH63_2161 CH63_2161 CH63_2161 2351278 2352177 + glycosyl hydrolases 8 family protein [G] COG3405 Endoglucanase Y gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2161 CH63_2162 CH63_2162 CH63_2162 2352491 2354506 + diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2200 FOG: EAL domain gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2162 CH63_2163 CH63_2163 kdgM kdgM 2355146 2355850 + oligogalacturonate-specific porin kdgM gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2163 CH63_2164 CH63_2164 pelY pelY 2356096 2357814 + periplasmic pectate lyase gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2164 CH63_2165 CH63_2165 CH63_2165 2357939 2358418 + F5/8 type C domain protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2165 CH63_2166 CH63_2166 dctA dctA 2358873 2360162 + aerobic C4-dicarboxylate transport protein [C] COG1301 Na+/H+-dicarboxylate symporters gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2166 CH63_2167 CH63_2167 pqqL pqqL 2360527 2362026 + insulinase family protease [R] COG0612 Predicted Zn-dependent peptidases gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2167 CH63_2168 CH63_2168 CH63_2168 2362190 2363134 - pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2168 CH63_2169 CH63_2169 dmpI dmpI 2363413 2363613 - 4-oxalocrotonate tautomerase enzyme family protein taut: 4-oxalocrotonate tautomerase enzyme family protein~[R] COG1942 Uncharacterized protein%2C 4-oxalocrotonate tautomerase homolog gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2169 CH63_217 CH63_217 CH63_217 222210 222422 - bacterial regulatory s%2C lacI family protein gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_217 CH63_2170 CH63_2170 CH63_2170 2363832 2364677 + EAL domain protein [T] COG2200 FOG: EAL domain gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2170 CH63_2171 CH63_2171 CH63_2171 2364982 2367197 + asmA family protein pseudogene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2171 CH63_2172 CH63_2172 CH63_2172 2367174 2367971 - CDP-diacylglycerol pyrophosphatase family protein [I] COG2134 CDP-diacylglycerol pyrophosphatase gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2172 CH63_2174 CH63_2174 yhjD yhjD 2367975 2369057 - inner membrane protein YhjD [S] COG1295 Predicted membrane protein gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2174 CH63_2175 CH63_2175 CH63_2175 2369735 2372947 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2175 CH63_2176 CH63_2176 CH63_2176 2373050 2373904 + hypothetical protein conserved hypothetical family protein gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2176 CH63_2177 CH63_2177 CH63_2177 2373906 2374403 + hypothetical protein conserved hypothetical protein gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2177 CH63_2178 CH63_2178 CH63_2178 2374471 2374977 + hypothetical protein conserved hypothetical protein gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2178 CH63_2179 CH63_2179 CH63_2179 2375223 2376359 - glycerate kinase family protein [G] COG1929 Glycerate kinase gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2179 CH63_218 CH63_218 CH63_218 221353 222285 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_218 CH63_2180 CH63_2180 CH63_2180 2376370 2377638 - citrate transporter family protein [GE] COG2610 H+/gluconate symporter and related permeases gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2180 CH63_2181 CH63_2181 CH63_2181 2377816 2378943 - sugar diacid recognition family protein [KT] COG3835 Sugar diacid utilization regulator gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2181 CH63_2182 CH63_2182 gor gor 2379135 2380487 - glutathione-disulfide reductase gluta_reduc_1: glutathione-disulfide reductase~[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2182 CH63_2183 CH63_2183 CH63_2183 2380673 2381515 - ribosomal RNA small subunit methyltransferase D%2C RsmJ family protein [R] COG2961 Protein involved in catabolism of external DNA gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2183 CH63_2184 CH63_2184 CH63_2184 2381844 2383886 + peptidase M3 family protein [E] COG0339 Zn-dependent oligopeptidases gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2184 CH63_2185 CH63_2185 CH63_2185 2383890 2384660 + SAM-dependent methyltransferase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2185 CH63_2186 CH63_2186 prtA prtA 2384725 2386059 - secreted protease A [Q] COG2931 RTX toxins and related Ca2+-binding proteins gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2186 CH63_2187 CH63_2187 CH63_2187 2386307 2387650 - glu/Leu/Phe/Val dehydrogenase%2C dimerization domain protein [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2187 CH63_2188 CH63_2188 uspA uspA 2387897 2388343 - universal stress protein A [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2188 CH63_2189 CH63_2189 uspB uspB 2389051 2389386 + universal stress protein B gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2189 CH63_219 CH63_219 CH63_219 222756 222845 + putative membrane protein gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_219 CH63_2190 CH63_2190 CH63_2190 2389519 2389977 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2190 CH63_2191 CH63_2191 CH63_2191 2390243 2391739 - phosphate transporter family protein [P] COG0306 Phosphate/sulphate permeases gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2191 CH63_2192 CH63_2192 CH63_2192 2392050 2393246 + flavo%2C family protein flavo%2C HI0933 family protein~[R] COG2081 Predicted flavoproteins gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2192 CH63_2193 CH63_2193 CH63_2193 2393382 2395937 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2193 CH63_2194 CH63_2194 CH63_2194 2396126 2397649 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2194 CH63_2195 CH63_2195 CH63_2195 2397642 2398634 + branched-chain amino acid transport system / permease component family protein [R] COG4158 Predicted ABC-type sugar transport system%2C permease component gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2195 CH63_2196 CH63_2196 CH63_2196 2398665 2399609 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2196 CH63_2197 CH63_2197 CH63_2197 2399684 2400367 + hypothetical protein conserved hypothetical protein~[R] COG3822 ABC-type sugar transport system%2C auxiliary component gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2197 CH63_2198 CH63_2198 CH63_2198 2400393 2401253 + ketose-bisphosphate aldolase family protein cbbA: ketose-bisphosphate aldolase family protein~[G] COG0191 Fructose/tagatose bisphosphate aldolase gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2198 CH63_2199 CH63_2199 CH63_2199 2401263 2402270 + pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2199 CH63_22 CH63_22 minE minE 22575 22844 - cell division topological specificity factor MinE minE: cell division topological specificity factor MinE~[D] COG0851 Septum formation topological specificity factor gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_22 CH63_220 CH63_220 sodB sodB 222949 223527 - superoxide dismutase Fe [P] COG0605 Superoxide dismutase gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_220 CH63_2200 CH63_2200 CH63_2200 2402455 2403192 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2200 CH63_2201 CH63_2201 CH63_2201 2403615 2403827 + hypothetical protein conserved hypothetical protein gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2201 CH63_2202 CH63_2202 CH63_2202 2403956 2404651 + pirin family protein [R] COG1741 Pirin-related protein gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2202 CH63_2203 CH63_2203 gntR gntR 2404837 2405775 + HTH-type transcriptional regulator gntR [K] COG1609 Transcriptional regulators gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2203 CH63_2204 CH63_2204 CH63_2204 2405867 2407183 - transporter%2C gluconate:H+ symporter family protein gntP: transporter%2C gluconate:H+ symporter family protein~[GE] COG2610 H+/gluconate symporter and related permeases gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2204 CH63_2205 CH63_2205 CH63_2205 2407400 2407903 + carbohydrate kinase%2C thermoresistant glucokinase family protein therm_gnt_kin: carbohydrate kinase%2C thermoresistant glucokinase family protein~[G] COG3265 Gluconate kinase gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2205 CH63_2206 CH63_2206 CH63_2206 2408086 2408319 + hypothetical protein conserved hypothetical protein gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2206 CH63_2207 CH63_2207 CH63_2207 2408510 2408650 + hypothetical protein conserved hypothetical protein gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2207 CH63_2208 CH63_2208 CH63_2208 2408705 2409094 + hypothetical protein conserved hypothetical protein gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2208 CH63_2209 CH63_2209 CH63_2209 2409334 2409927 - hypothetical protein conserved hypothetical protein~[U] COG2095 Multiple antibiotic transporter gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2209 CH63_221 CH63_221 CH63_221 223905 224756 - nlpC/P60 family protein [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_221 CH63_2210 CH63_2210 asd asd 2410285 2411388 + aspartate-semialdehyde dehydrogenase asd_gamma: aspartate-semialdehyde dehydrogenase~[E] COG0136 Aspartate-semialdehyde dehydrogenase gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2210 CH63_2211 CH63_2211 CH63_2211 2411557 2411838 + hypothetical protein conserved hypothetical protein gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2211 CH63_2212 CH63_2212 CH63_2212 2412145 2412453 + hypothetical protein conserved hypothetical protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2212 CH63_2213 CH63_2213 CH63_2213 2412460 2412747 + hypothetical protein conserved hypothetical protein gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2213 CH63_2214 CH63_2214 CH63_2214 2412905 2413048 + hypothetical protein conserved hypothetical protein gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2214 CH63_2215 CH63_2215 CH63_2215 2414483 2425462 + lysM domain protein gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2215 CH63_2216 CH63_2216 CH63_2216 2425551 2427296 + bacterial Ig-like domain family protein gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2216 CH63_2217 CH63_2217 CH63_2217 2427504 2429201 - histidine kinase family protein [T] COG3275 Putative regulator of cell autolysis gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2217 CH63_2218 CH63_2218 glgB glgB 2429707 2431890 + 1%2C4-alpha-glucan branching enzyme branching_enzym: 1%2C4-alpha-glucan branching enzyme~[G] COG0296 1%2C4-alpha-glucan branching enzyme gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2218 CH63_2219 CH63_2219 glgX glgX 2431892 2433880 + glycogen debranching enzyme GlgX glgX_debranch: glycogen debranching enzyme GlgX~[G] COG1523 Type II secretory pathway%2C pullulanase PulA and related glycosidases gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2219 CH63_222 CH63_222 CH63_222 224875 225096 + hypothetical protein conserved hypothetical protein gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_222 CH63_2220 CH63_2220 glgC glgC 2433890 2435176 + glucose-1-phosphate adenylyltransferase glgC: glucose-1-phosphate adenylyltransferase~[G] COG0448 ADP-glucose pyrophosphorylase gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2220 CH63_2221 CH63_2221 glgA glgA 2435387 2436817 + glycogen/starch synthase%2C ADP-glucose type family protein glgA: glycogen/starch synthase%2C ADP-glucose type family protein~[G] COG0297 Glycogen synthase gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2221 CH63_2222 CH63_2222 glgP glgP 2436986 2439433 + glycogen/starch/alpha-glucan phosphorylases family protein P_ylase: glycogen/starch/alpha-glucan phosphorylases family protein~[G] COG0058 Glucan phosphorylase gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2222 CH63_2223 CH63_2223 CH63_2223 2439596 2441110 - FAD dependent oxidoreductase family protein [C] COG0578 Glycerol-3-phosphate dehydrogenase gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2223 CH63_2224 CH63_2224 CH63_2224 2441509 2441883 + putative membrane protein gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2224 CH63_2225 CH63_2225 CH63_2225 2442192 2442656 + hypothetical protein conserved hypothetical protein gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2225 CH63_2226 CH63_2226 CH63_2226 2443445 2444230 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2226 CH63_2227 CH63_2227 CH63_2227 2444284 2444799 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2227 CH63_2228 CH63_2228 CH63_2228 2444850 2445593 + hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2228 CH63_2229 CH63_2229 CH63_2229 2445557 2446645 + hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2229 CH63_223 CH63_223 grxD grxD 225196 225546 + monothiol glutaredoxin%2C Grx4 family [O] COG0278 Glutaredoxin-related protein gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_223 CH63_2230 CH63_2230 CH63_2230 2446771 2448072 + putative aec23 [T] COG3456 Uncharacterized conserved protein%2C contains FHA domain gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2230 CH63_2231 CH63_2231 CH63_2231 2448086 2448631 + type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2231 CH63_2232 CH63_2232 CH63_2232 2448634 2449980 + hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2232 CH63_2233 CH63_2233 CH63_2233 2449995 2450747 + type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2233 CH63_2234 CH63_2234 clpV clpV 2450758 2453361 + type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2234 CH63_2235 CH63_2235 CH63_2235 2453358 2454155 + transcriptional regulator%2C Fis family gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2235 CH63_2236 CH63_2236 CH63_2236 2454152 2454838 + hypothetical protein conserved hypothetical protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2236 CH63_2237 CH63_2237 CH63_2237 2454844 2456232 + hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2237 CH63_2238 CH63_2238 CH63_2238 2456264 2459797 + intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2238 CH63_2239 CH63_2239 CH63_2239 2459922 2460704 + hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2239 CH63_224 CH63_224 rnt rnt 225855 226502 - ribonuclease T RNaseT: ribonuclease T~[L] COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_224 CH63_2240 CH63_2240 CH63_2240 2460701 2461234 + impA domain family protein [S] COG3515 Uncharacterized protein conserved in bacteria gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2240 CH63_2241 CH63_2241 CH63_2241 2461256 2463454 + Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2241 CH63_2242 CH63_2242 CH63_2242 2463457 2463879 + hypothetical protein conserved hypothetical protein~[S] COG5435 Uncharacterized conserved protein gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2242 CH63_2243 CH63_2243 CH63_2243 2463924 2468462 + RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2243 CH63_2244 CH63_2244 CH63_2244 2468471 2469265 + hypothetical protein conserved hypothetical protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2244 CH63_2245 CH63_2245 CH63_2245 2469612 2470511 - xylose isomerase-like TIM barrel family protein [G] COG1082 Sugar phosphate isomerases/epimerases gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2245 CH63_2246 CH63_2246 CH63_2246 2470508 2471638 - oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2246 CH63_2247 CH63_2247 CH63_2247 2471908 2472774 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2247 CH63_2248 CH63_2248 CH63_2248 2472936 2473439 - rbsD / FucU transport family protein [G] COG1869 ABC-type ribose transport system%2C auxiliary component gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2248 CH63_2249 CH63_2249 CH63_2249 2473445 2474374 - phosphomethylpyrimidine kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2249 CH63_225 CH63_225 gloA gloA 226614 227021 - lactoylglutathione lyase glyox_I: lactoylglutathione lyase~[E] COG0346 Lactoylglutathione lyase and related lyases gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_225 CH63_2250 CH63_2250 deoC deoC 2474531 2475232 - deoxyribose-phosphate aldolase deoC: deoxyribose-phosphate aldolase~[F] COG0274 Deoxyribose-phosphate aldolase gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2250 CH63_2251 CH63_2251 ssuE ssuE 2475703 2476284 + FMN reductase FMN_reduc_SsuE: FMN reductase~[R] COG0431 Predicted flavoprotein gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2251 CH63_2252 CH63_2252 CH63_2252 2476299 2477420 + ABC transporter%2C substrate-binding%2C aliphatic sulfonates family protein ssuA_fam: ABC transporter%2C substrate-binding%2C aliphatic sulfonates family protein~[P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems%2C periplasmic components gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2252 CH63_2253 CH63_2253 ssuD ssuD 2477439 2478587 + alkanesulfonate monooxygenase%2C FMNH(2)-dependent alk_sulf_monoox: alkanesulfonate monooxygenase%2C FMNH(2)-dependent~[C] COG2141 Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2253 CH63_2254 CH63_2254 CH63_2254 2478599 2479393 + binding--dependent transport system inner membrane component family protein [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2254 CH63_2255 CH63_2255 CH63_2255 2479390 2480205 + ABC transporter family protein [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system%2C ATPase component gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2255 CH63_2256 CH63_2256 CH63_2256 2480824 2481027 - relB antitoxin family protein [L] COG3077 DNA-damage-inducible protein J gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2256 CH63_2257 CH63_2257 CH63_2257 2481481 2482836 + permease family protein [R] COG2252 Permeases gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2257 CH63_2258 CH63_2258 CH63_2258 2483185 2484834 + Na+/H+ antiporter a_cpa1: Na+/H+ antiporter~[P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2258 CH63_2259 CH63_2259 CH63_2259 2485052 2486239 - hypothetical protein conserved hypothetical protein gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2259 CH63_226 CH63_226 CH63_226 227294 230248 + RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_226 CH63_2260 CH63_2260 lpxL lpxL 2486391 2487311 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein~[M] COG1560 Lauroyl/myristoyl acyltransferase gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2260 CH63_2261 CH63_2261 CH63_2261 2488105 2489094 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2261 CH63_2262 CH63_2262 ccmA ccmA 2489298 2490794 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2262 CH63_2263 CH63_2263 CH63_2263 2490787 2491776 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2263 CH63_2264 CH63_2264 CH63_2264 2491778 2492731 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2264 CH63_2265 CH63_2265 CH63_2265 2492750 2494387 + putative carbohydrate kinase [C] COG1069 Ribulose kinase gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2265 CH63_2266 CH63_2266 CH63_2266 2494384 2494989 + SIS domain protein [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2266 CH63_2267 CH63_2267 CH63_2267 2495179 2496030 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2267 CH63_2268 CH63_2268 CH63_2268 2496284 2497630 + esterase-like activity of phytase family protein [S] COG4222 Uncharacterized protein conserved in bacteria gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2268 CH63_2269 CH63_2269 CH63_2269 2497737 2498912 - hypothetical protein conserved hypothetical protein~[O] COG1076 DnaJ-domain-containing proteins 1 gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2269 CH63_227 CH63_227 CH63_227 230469 231566 - flavin oxidoreductase / NADH oxidase family protein NADH:flavin oxidoreductase / NADH oxidase family protein~[C] COG1902 NADH:flavin oxidoreductases%2C Old Yellow Enzyme family gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_227 CH63_2270 CH63_2270 CH63_2270 2499317 2499775 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2270 CH63_2271 CH63_2271 CH63_2271 2499958 2500170 - 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2271 CH63_2272 CH63_2272 CH63_2272 2500430 2500642 - 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2272 CH63_2273 CH63_2273 slyB slyB 2501175 2501642 - outer membrane lipoprotein slyB [M] COG3133 Outer membrane lipoprotein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2273 CH63_2274 CH63_2274 CH63_2274 2502118 2502930 + metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2274 CH63_2275 CH63_2275 CH63_2275 2502995 2503885 + NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase family protein [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2275 CH63_2276 CH63_2276 CH63_2276 2504063 2504458 + carboxymuconolactone decarboxylase family protein [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2276 CH63_2277 CH63_2277 CH63_2277 2504612 2505976 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2277 CH63_2278 CH63_2278 CH63_2278 2506066 2506728 + bacterial regulatory s%2C gntR family protein [K] COG1802 Transcriptional regulators gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2278 CH63_2279 CH63_2279 CH63_2279 2506794 2507270 + hypothetical protein conserved hypothetical protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2279 CH63_228 CH63_228 nemR nemR 231654 232253 - HTH-type transcriptional repressor nemR [K] COG1309 Transcriptional regulator gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_228 CH63_2280 CH63_2280 fis fis 2508024 2508320 - DNA-binding protein fis [KL] COG2901 Factor for inversion stimulation Fis%2C transcriptional activator gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2280 CH63_2281 CH63_2281 dusB dusB 2508345 2509310 - tRNA-dihydrouridine synthase B [J] COG0042 tRNA-dihydrouridine synthase gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2281 CH63_2282 CH63_2282 prmA prmA 2509899 2510780 - ribosomal protein L11 methyltransferase prmA: ribosomal protein L11 methyltransferase~[J] COG2264 Ribosomal protein L11 methylase gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2282 CH63_2283 CH63_2283 panF panF 2510856 2512310 - sodium/pantothenate symporter panF: sodium/pantothenate symporter~[H] COG4145 Na+/panthothenate symporter gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2283 CH63_2284 CH63_2284 CH63_2284 2512300 2512542 - hypothetical protein conserved hypothetical protein~[S] COG3924 Predicted membrane protein gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2284 CH63_2285 CH63_2285 CH63_2285 2513478 2513654 + hypothetical protein conserved hypothetical protein gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2285 CH63_2286 CH63_2286 accC accC 2513900 2515249 - acetyl-CoA carboxylase%2C biotin carboxylase subunit accC: acetyl-CoA carboxylase%2C biotin carboxylase subunit~[I] COG0439 Biotin carboxylase gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2286 CH63_2287 CH63_2287 accB accB 2515261 2515725 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein BCCP: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~[I] COG0511 Biotin carboxyl carrier protein gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2287 CH63_2288 CH63_2288 aroQ aroQ 2515883 2516335 - 3-dehydroquinate dehydratase%2C type II aroQ: 3-dehydroquinate dehydratase%2C type II~[E] COG0757 3-dehydroquinate dehydratase II gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2288 CH63_2289 CH63_2289 CH63_2289 2516598 2517218 - ferric reductase like transmembrane component family protein [S] COG2717 Predicted membrane protein gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2289 CH63_229 CH63_229 CH63_229 232476 233951 - hypothetical protein conserved hypothetical protein~[R] COG2194 Predicted membrane-associated%2C metal-dependent hydrolase gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_229 CH63_2290 CH63_2290 CH63_2290 2517218 2518318 - oxidoreductase molybdopterin binding domain protein [R] COG2041 Sulfite oxidase and related enzymes gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2290 CH63_2291 CH63_2291 CH63_2291 2518541 2519518 - quinone oxidoreductase%2C YhdH/YhfP family protein oxido_YhdH: quinone oxidoreductase%2C YhdH/YhfP family protein~[CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2291 CH63_2292 CH63_2292 CH63_2292 2519919 2521835 + EAL domain protein [T] COG2200 FOG: EAL domain gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2292 CH63_2293 CH63_2293 mreB mreB 2522172 2523215 + rod shape-determining protein mreB [D] COG1077 Actin-like ATPase involved in cell morphogenesis gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2293 CH63_2294 CH63_2294 mreC mreC 2523419 2524414 + rod shape-determining protein MreC mreC: rod shape-determining protein MreC~[M] COG1792 Cell shape-determining protein gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2294 CH63_2295 CH63_2295 mreD mreD 2524411 2524899 + rod shape-determining protein MreD shape_MreD: rod shape-determining protein MreD~[M] COG2891 Cell shape-determining protein gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2295 CH63_2296 CH63_2296 maf maf 2524913 2525506 + septum formation protein Maf maf: septum formation protein Maf~[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2296 CH63_2297 CH63_2297 rng rng 2525496 2526965 + ribonuclease G [J] COG1530 Ribonucleases G and E gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2297 CH63_2298 CH63_2298 CH63_2298 2527059 2530982 + hypothetical protein conserved hypothetical protein~[S] COG3164 Predicted membrane protein gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2298 CH63_2299 CH63_2299 CH63_2299 2530979 2531848 + carbon-nitrogen hydrolase family protein [R] COG0388 Predicted amidohydrolase gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2299 CH63_23 CH63_23 minD minD 22848 23660 - septum site-determining protein MinD minD_bact: septum site-determining protein MinD~[D] COG2894 Septum formation inhibitor-activating ATPase gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_23 CH63_230 CH63_230 CH63_230 234620 235051 + winged helix DNA-binding domain protein [K] COG1846 Transcriptional regulators gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_230 CH63_2300 CH63_2300 CH63_2300 2531860 2533305 + modulator of DNA gyrase family protein [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2300 CH63_2301 CH63_2301 CH63_2301 2533508 2536366 - RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2301 CH63_2302 CH63_2302 CH63_2302 2536391 2539222 - RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2302 CH63_2303 CH63_2303 CH63_2303 2539423 2539782 - putative exported protein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2303 CH63_2304 CH63_2304 CH63_2304 2539779 2540180 - D-alanyl-D-alanine carboxypeptidase family protein gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2304 CH63_2305 CH63_2305 CH63_2305 2540193 2540495 - putative membrane protein gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2305 CH63_2306 CH63_2306 CH63_2306 2540629 2545119 - virulence plasmid 65kDa B family protein gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2306 CH63_2307 CH63_2307 CH63_2307 2545176 2548769 - putative insecticidal toxin complex protein TcaB gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2307 CH63_2308 CH63_2308 CH63_2308 2548810 2551311 - virulence plasmid 28.1kDa A family protein gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2308 CH63_2309 CH63_2309 CH63_2309 2551547 2552359 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2309 CH63_231 CH63_231 slyB slyB 235195 235662 - outer membrane lipoprotein slyB [M] COG3133 Outer membrane lipoprotein gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_231 CH63_2310 CH63_2310 CH63_2310 2552674 2553585 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2310 CH63_2311 CH63_2311 CH63_2311 2553888 2554091 + hypothetical protein conserved hypothetical protein gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2311 CH63_2312 CH63_2312 CH63_2312 2554099 2555034 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[V] COG1566 Multidrug resistance efflux pump gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2312 CH63_2313 CH63_2313 CH63_2313 2555036 2556991 + fusaric acid resistance family protein [S] COG1289 Predicted membrane protein gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2313 CH63_2314 CH63_2314 CH63_2314 2557258 2558391 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2314 CH63_2315 CH63_2315 CH63_2315 2558388 2558726 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2315 CH63_2316 CH63_2316 CH63_2316 2558921 2559394 + ribonuclease family protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2316 CH63_2317 CH63_2317 CH63_2317 2559399 2559680 + hypothetical protein conserved hypothetical protein~[K] COG2732 Barstar%2C RNAse (barnase) inhibitor gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2317 CH63_2318 CH63_2318 CH63_2318 2559792 2560340 - hypothetical protein conserved hypothetical protein~[S] COG3028 Uncharacterized protein conserved in bacteria gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2318 CH63_2319 CH63_2319 CH63_2319 2560521 2561861 + modulator of DNA gyrase family protein [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2319 CH63_232 CH63_232 CH63_232 236218 237330 + hypothetical protein conserved hypothetical protein~[O] COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_232 CH63_2320 CH63_2320 CH63_2320 2562146 2562754 + hypothetical protein conserved hypothetical protein gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2320 CH63_2321 CH63_2321 cybC cybC 2562962 2563348 + soluble cytochrome b562 [C] COG3783 Soluble cytochrome b562 gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2321 CH63_2322 CH63_2322 CH63_2322 2563580 2563990 - hypothetical protein transcription elongation factor%2C GreA/GreB%2C C-term family protein~[K] COG0782 Transcription elongation factor gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2322 CH63_2323 CH63_2323 treC treC 2564343 2566010 - alpha%2Calpha-phosphotrehalase trehalose_treC: alpha%2Calpha-phosphotrehalase~[G] COG0366 Glycosidases gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2323 CH63_2324 CH63_2324 treP treP 2566105 2567520 - PTS system%2C trehalose-specific IIBC component PTS-IIBC-Tre: PTS system%2C trehalose-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2324 CH63_2325 CH63_2325 treR treR 2567931 2568884 - trehalose operon repressor trehalos_R_Ecol: trehalose operon repressor~[K] COG1609 Transcriptional regulators gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2325 CH63_2326 CH63_2326 CH63_2326 2569118 2569594 - putative exported protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2326 CH63_2327 CH63_2327 CH63_2327 2569893 2570279 - reactive intermediate/imine deaminase family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2327 CH63_2328 CH63_2328 pyrI pyrI 2570417 2570881 - aspartate carbamoyltransferase%2C regulatory subunit ATCase_reg: aspartate carbamoyltransferase%2C regulatory subunit~[F] COG1781 Aspartate carbamoyltransferase%2C regulatory subunit gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2328 CH63_2329 CH63_2329 pyrB pyrB 2570893 2571828 - aspartate carbamoyltransferase asp_carb_tr: aspartate carbamoyltransferase~[F] COG0540 Aspartate carbamoyltransferase%2C catalytic chain gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2329 CH63_233 CH63_233 CH63_233 237388 237702 + membrane-bound lysozyme-inhibitor of c-type lysozyme family protein [R] COG3895 Predicted periplasmic protein gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_233 CH63_2330 CH63_2330 ptsO ptsO 2572166 2572438 - phosphocarrier protein NPr [G] COG1925 Phosphotransferase system%2C HPr-related proteins gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2330 CH63_2331 CH63_2331 CH63_2331 2572435 2573289 - hypothetical protein conserved hypothetical protein~[R] COG1660 Predicted P-loop-containing kinase gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2331 CH63_2332 CH63_2332 ptsN ptsN 2573595 2574077 - PTS IIA-like nitrogen-regulatory protein PtsN nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN~[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2332 CH63_2333 CH63_2333 raiA raiA 2574375 2574482 - ribosome-associated inhibitor A yfiA: ribosomal subunit interface protein~[J] COG1544 Ribosome-associated protein Y (PSrp-1) gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2333 CH63_2334 CH63_2334 rpoN rpoN 2574506 2575939 - RNA polymerase sigma-54 factor rpoN_sigma: RNA polymerase sigma-54 factor~[K] COG1508 DNA-directed RNA polymerase specialized sigma subunit%2C sigma54 homolog gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2334 CH63_2335 CH63_2335 lptB lptB 2576001 2576726 - LPS export ABC transporter ATP-binding protein LPS_export_lptB: LPS export ABC transporter ATP-binding protein~[R] COG1137 ABC-type (unclassified) transport system%2C ATPase component gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2335 CH63_2336 CH63_2336 lptA lptA 2576733 2577278 - lipopolysaccharide transport periplasmic protein LptA outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA~[S] COG1934 Uncharacterized protein conserved in bacteria gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2336 CH63_2337 CH63_2337 lptC lptC 2577262 2577825 - LPS export ABC transporter periplasmic protein LptC lptC_YrbK: LPS export ABC transporter periplasmic protein LptC~[S] COG3117 Uncharacterized protein conserved in bacteria gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2337 CH63_2338 CH63_2338 kdsC kdsC 2577822 2578385 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [R] COG1778 Low specificity phosphatase (HAD superfamily) gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2338 CH63_2339 CH63_2339 CH63_2339 2578634 2579620 - sugar isomerase%2C KpsF/GutQ family protein kpsF: sugar isomerase%2C KpsF/GutQ family protein~[M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2339 CH63_234 CH63_234 pdxH pdxH 237793 238446 + pyridoxamine 5'-phosphate oxidase pdxH: pyridoxamine 5'-phosphate oxidase~[H] COG0259 Pyridoxamine-phosphate oxidase gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_234 CH63_2340 CH63_2340 CH63_2340 2579731 2580705 - sodium/calcium exchanger family protein [P] COG0530 Ca2+/Na+ antiporter gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2340 CH63_2341 CH63_2341 CH63_2341 2580970 2581788 + ABC transporter family protein [Q] COG1127 ABC-type transport system involved in resistance to organic solvents%2C ATPase component gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2341 CH63_2342 CH63_2342 CH63_2342 2582006 2582788 + putative phospholipid ABC transporter permease protein mlaE [Q] COG0767 ABC-type transport system involved in resistance to organic solvents%2C permease component gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2342 CH63_2343 CH63_2343 mlaD mlaD 2582793 2583350 + outer membrane lipid asymmetry maintenance protein MlaD OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD~[Q] COG1463 ABC-type transport system involved in resistance to organic solvents%2C periplasmic component gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2343 CH63_2344 CH63_2344 CH63_2344 2583363 2583986 + toluene tolerance%2C Ttg2 family protein [Q] COG2854 ABC-type transport system involved in resistance to organic solvents%2C auxiliary component gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2344 CH63_2345 CH63_2345 CH63_2345 2584022 2584324 + STAS domain protein [R] COG3113 Predicted NTP binding protein (contains STAS domain) gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2345 CH63_2346 CH63_2346 CH63_2346 2584471 2584725 + bolA-like family protein [K] COG5007 Predicted transcriptional regulator%2C BolA superfamily gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2346 CH63_2347 CH63_2347 murA murA 2584879 2586141 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2347 CH63_2348 CH63_2348 degS degS 2586322 2587410 - periplasmic serine peptidase DegS protease_degS: periplasmic serine peptidase DegS~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2348 CH63_2349 CH63_2349 CH63_2349 2587636 2588094 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2349 CH63_235 CH63_235 tyrS tyrS 238628 239902 + tyrosine--tRNA ligase tyrS: tyrosine--tRNA ligase~[J] COG0162 Tyrosyl-tRNA synthetase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_235 CH63_2350 CH63_2350 CH63_2350 2588211 2589584 - peptidase Do family protein degP_htrA_DO: peptidase Do family protein~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2350 CH63_2351 CH63_2351 CH63_2351 2589855 2590259 - hypothetical protein conserved hypothetical protein~[S] COG3105 Uncharacterized protein conserved in bacteria gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2351 CH63_2352 CH63_2352 CH63_2352 2590404 2590526 + hypothetical protein conserved hypothetical protein gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2352 CH63_2353 CH63_2353 CH63_2353 2590483 2591610 + AFG1-like ATPase family protein [R] COG1485 Predicted ATPase gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2353 CH63_2354 CH63_2354 rplM rplM 2591924 2592352 + ribosomal protein L13 rplM_bact: ribosomal protein L13~[J] COG0102 Ribosomal protein L13 gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2354 CH63_2355 CH63_2355 rpsI rpsI 2592367 2592759 + 30S ribosomal protein S9 [J] COG0103 Ribosomal protein S9 gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2355 CH63_2356 CH63_2356 CH63_2356 2593133 2593774 + putative stringent starvation protein A [O] COG0625 Glutathione S-transferase gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2356 CH63_2357 CH63_2357 CH63_2357 2593780 2594295 + stringent starvation B family protein [R] COG2969 Stringent starvation protein B gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2357 CH63_2358 CH63_2358 CH63_2358 2594448 2594933 - putative exported protein gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2358 CH63_2359 CH63_2359 CH63_2359 2595374 2596792 - glutamate synthase%2C small subunit domain protein gltD_gamma_fam: glutamate synthase%2C small subunit domain protein~[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2359 CH63_236 CH63_236 CH63_236 240057 240917 + pyridoxal kinase pyridox_kin: pyridoxal kinase~[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_236 CH63_2360 CH63_2360 CH63_2360 2596802 2601259 - glutamine amidotransferases class-II family protein [E] COG0070 Glutamate synthase domain 3 gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2360 CH63_2361 CH63_2361 CH63_2361 2602082 2603005 + radical SAM superfamily protein [R] COG1242 Predicted Fe-S oxidoreductase gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2361 CH63_2362 CH63_2362 CH63_2362 2603269 2605605 + sensory box protein [T] COG0642 Signal transduction histidine kinase gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2362 CH63_2363 CH63_2363 CH63_2363 2605847 2606500 + DJ-1/PfpI family protein [Q] COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2363 CH63_2364 CH63_2364 mtgA mtgA 2606497 2607222 + monofunctional biosynthetic peptidoglycan transglycosylase mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase~[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein) gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2364 CH63_2365 CH63_2365 CH63_2365 2607429 2608004 - BON domain protein [R] COG2823 Predicted periplasmic or secreted lipoprotein gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2365 CH63_2366 CH63_2366 CH63_2366 2608015 2608605 - SIS domain protein [G] COG0279 Phosphoheptose isomerase gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2366 CH63_2367 CH63_2367 CH63_2367 2608876 2609229 - hypothetical protein conserved hypothetical protein~[L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2367 CH63_2368 CH63_2368 CH63_2368 2609313 2611286 - lppC lipofamily protein [R] COG3107 Putative lipoprotein gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2368 CH63_2369 CH63_2369 rsmI rsmI 2611349 2612248 + 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [R] COG0313 Predicted methyltransferases gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2369 CH63_237 CH63_237 gstB gstB 240977 241582 - glutathione S-transferase GST-6.0 [O] COG0625 Glutathione S-transferase gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_237 CH63_2370 CH63_2370 CH63_2370 2613072 2613776 - pirin family protein [R] COG1741 Pirin-related protein gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2370 CH63_2371 CH63_2371 CH63_2371 2614038 2614931 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2371 CH63_2372 CH63_2372 CH63_2372 2615062 2615997 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0435 Predicted glutathione S-transferase gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2372 CH63_2373 CH63_2373 CH63_2373 2616013 2616456 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2373 CH63_2374 CH63_2374 CH63_2374 2616419 2616793 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2374 CH63_2375 CH63_2375 CH63_2375 2616793 2617815 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2375 CH63_2376 CH63_2376 CH63_2376 2618223 2618342 + hypothetical protein conserved hypothetical protein gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2376 CH63_2377 CH63_2377 CH63_2377 2618478 2620008 + 16S ribosomal RNA rRNA gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2377 CH63_2378 CH63_2378 CH63_2378 2620150 2620225 + tRNA-Glu tRNA gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2378 CH63_2379 CH63_2379 CH63_2379 2620480 2623384 + 23S ribosomal RNA rRNA gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2379 CH63_238 CH63_238 CH63_238 241827 242090 - hypothetical protein conserved hypothetical protein gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_238 CH63_2380 CH63_2380 CH63_2380 2623496 2623610 + 5S ribosomal RNA rRNA gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2380 CH63_2381 CH63_2381 CH63_2381 2624112 2625320 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2381 CH63_2382 CH63_2382 mobB mobB 2625378 2625908 - molybdopterin-guanine dinucleotide biosynthesis protein B mobB: molybdopterin-guanine dinucleotide biosynthesis protein B~[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2382 CH63_2383 CH63_2383 mobA mobA 2625908 2626495 - molybdenum cofactor guanylyltransferase molyb_mobA: molybdenum cofactor guanylyltransferase~[H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2383 CH63_2384 CH63_2384 yihD yihD 2626649 2626918 + protein yihD [S] COG3084 Uncharacterized protein conserved in bacteria gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2384 CH63_2385 CH63_2385 CH63_2385 2627009 2627995 + phosphotransferase enzyme family protein [R] COG2334 Putative homoserine kinase type II (protein kinase fold) gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2385 CH63_2386 CH63_2386 CH63_2386 2628023 2628646 + DSBA-like thioredoxin domain protein [OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2386 CH63_2387 CH63_2387 polA polA 2629138 2631936 + DNA polymerase I pola: DNA polymerase I~[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2387 CH63_2388 CH63_2388 CH63_2388 2632345 2632803 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2388 CH63_2389 CH63_2389 CH63_2389 2633055 2633513 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2389 CH63_239 CH63_239 CH63_239 242336 242926 - yip1 domain protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_239 CH63_2390 CH63_2390 ysxC ysxC 2633765 2634415 - ribosome biogenesis GTP-binding protein YsxC GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC~[R] COG0218 Predicted GTPase gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2390 CH63_2391 CH63_2391 CH63_2391 2635160 2635726 + der GTPase activator family protein [S] COG3078 Uncharacterized protein conserved in bacteria gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2391 CH63_2392 CH63_2392 hemN hemN 2635909 2637279 + oxygen-independent coproporphyrinogen III oxidase hemN: oxygen-independent coproporphyrinogen III oxidase~[H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2392 CH63_2393 CH63_2393 ntrC ntrC 2637333 2638745 - nitrogen regulation protein NR ntrC: nitrogen regulation protein NR~[T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2393 CH63_2394 CH63_2394 CH63_2394 2638753 2639802 - PAS fold family protein [T] COG3852 Signal transduction histidine kinase%2C nitrogen specific gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2394 CH63_2395 CH63_2395 glnA glnA 2640055 2641464 - glutamine synthetase%2C type I glnA: glutamine synthetase%2C type I~[E] COG0174 Glutamine synthetase gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2395 CH63_2396 CH63_2396 typA typA 2642026 2643849 + GTP-binding protein TypA/BipA typA_BipA: GTP-binding protein TypA/BipA~[T] COG1217 Predicted membrane GTPase involved in stress response gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2396 CH63_2397 CH63_2397 CH63_2397 2644171 2644761 + HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2397 CH63_2398 CH63_2398 yihY yihY 2644858 2645742 + YihY family inner membrane domain protein yihY_not_rbn: YihY family inner membrane domain protein~[S] COG1295 Predicted membrane protein gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2398 CH63_2399 CH63_2399 dtd dtd 2645749 2646186 + D-tyrosyl-tRNA(Tyr) deacylase [J] COG1490 D-Tyr-tRNAtyr deacylase gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2399 CH63_24 CH63_24 minC minC 23685 24371 - septum site-determining protein MinC minC: septum site-determining protein MinC~[D] COG0850 Septum formation inhibitor gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_24 CH63_240 CH63_240 CH63_240 243181 244686 - amino acid/peptide transporter family protein yjdL_sub1_fam: amino acid/peptide transporter family protein~[E] COG3104 Dipeptide/tripeptide permease gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_240 CH63_2400 CH63_2400 CH63_2400 2646260 2647039 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2400 CH63_2401 CH63_2401 CH63_2401 2647039 2648061 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2401 CH63_2402 CH63_2402 CH63_2402 2648195 2650258 + AAA domain family protein [V] COG1401 GTPase subunit of restriction endonuclease gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2402 CH63_2403 CH63_2403 CH63_2403 2650255 2651571 + mcrBC 5-methylcytosine restriction system component family protein [V] COG4268 McrBC 5-methylcytosine restriction system component gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2403 CH63_2404 CH63_2404 CH63_2404 2652193 2652456 - transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2404 CH63_2405 CH63_2405 CH63_2405 2652595 2653920 + DNA methylase family protein [L] COG0863 DNA modification methylase gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2405 CH63_2406 CH63_2406 CH63_2406 2653970 2654692 + histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2406 CH63_2407 CH63_2407 CH63_2407 2654664 2656037 + hypothetical protein conserved hypothetical protein gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2407 CH63_2408 CH63_2408 CH63_2408 2656381 2656668 - hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2408 CH63_2409 CH63_2409 CH63_2409 2656870 2657067 - type VI secretion%2C family domain protein type VI secretion%2C VC_A0111 family domain protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2409 CH63_241 CH63_241 CH63_241 244869 244958 + putative membrane protein gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_241 CH63_2410 CH63_2410 CH63_2410 2657108 2657203 + hypothetical protein [S] COG4913 Uncharacterized protein conserved in bacteria gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2410 CH63_2411 CH63_2411 CH63_2411 2657348 2658697 + exonuclease SbcCD%2C C subunit [S] COG4913 Uncharacterized protein conserved in bacteria gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2411 CH63_2412 CH63_2412 CH63_2412 2658694 2659848 + hypothetical protein conserved hypothetical protein~[S] COG4924 Uncharacterized protein conserved in bacteria gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2412 CH63_2413 CH63_2413 CH63_2413 2659994 2661040 - peptidase M48 family protein [O] COG0501 Zn-dependent protease with chaperone function gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2413 CH63_2414 CH63_2414 CH63_2414 2661051 2662247 - hypothetical protein conserved hypothetical protein~[S] COG4269 Predicted membrane protein gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2414 CH63_2415 CH63_2415 CH63_2415 2662953 2663489 + hypothetical protein conserved hypothetical protein gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2415 CH63_2416 CH63_2416 CH63_2416 2664359 2664703 - PTS system%2C Fru family%2C IIB component domain protein FRU: PTS system%2C Fru family%2C IIB component domain protein~[G] COG1445 Phosphotransferase system fructose-specific component IIB gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2416 CH63_2417 CH63_2417 CH63_2417 2663491 2664366 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2417 CH63_2418 CH63_2418 frwB frwB 2664796 2665116 - fructose-like phosphotransferase enzyme IIB component 2 [G] COG1445 Phosphotransferase system fructose-specific component IIB gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2418 CH63_2419 CH63_2419 CH63_2419 2665457 2666539 - PTS system%2C Fru family%2C IIC component domain protein PTS_IIC_fructo: PTS system%2C Fru family%2C IIC component domain protein~[G] COG1299 Phosphotransferase system%2C fructose-specific IIC component gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2419 CH63_242 CH63_242 CH63_242 245329 246609 - hypothetical protein conserved hypothetical protein~[S] COG4950 Uncharacterized protein conserved in bacteria gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_242 CH63_2420 CH63_2420 ptsP ptsP 2666904 2669462 + phosphoenolpyruvate-protein phosphotransferase PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase~[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2420 CH63_2421 CH63_2421 CH63_2421 2669524 2670015 - hypothetical protein conserved hypothetical protein gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2421 CH63_2422 CH63_2422 lsrG lsrG 2670315 2670605 - autoinducer 2-degrading protein lsrG [S] COG1359 Uncharacterized conserved protein gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2422 CH63_2423 CH63_2423 CH63_2423 2670669 2671544 - hypothetical protein conserved hypothetical protein~[G] COG1830 DhnA-type fructose-1%2C6-bisphosphate aldolase and related enzymes gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2423 CH63_2424 CH63_2424 lsrB lsrB 2671600 2672619 - autoinducer 2-binding protein lsrB [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2424 CH63_2425 CH63_2425 CH63_2425 2672678 2673678 - branched-chain amino acid transport system / permease component family protein pseudogene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2425 CH63_2427 CH63_2427 CH63_2427 2673675 2674730 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2427 CH63_2428 CH63_2428 ccmA ccmA 2674724 2676307 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2428 CH63_2429 CH63_2429 CH63_2429 2676652 2676876 + bacterial regulatory s%2C crp family protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2429 CH63_243 CH63_243 sapF sapF 246999 247814 - peptide transport system ATP-binding protein SapF [V] COG4167 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_243 CH63_2430 CH63_2430 lsrR lsrR 2677013 2677639 + transcriptional regulator lsrR [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2430 CH63_2431 CH63_2431 lsrK lsrK 2677810 2679402 + autoinducer 2 kinase LsrK [G] COG1070 Sugar (pentulose and hexulose) kinases gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2431 CH63_2432 CH63_2432 rfaQ rfaQ 2679748 2680911 + putative lipopolysaccharide heptosyltransferase III heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III~[M] COG0859 ADP-heptose:LPS heptosyltransferase gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2432 CH63_2433 CH63_2433 CH63_2433 2680959 2682191 + O-Antigen ligase family protein [M] COG3307 Lipid A core - O-antigen ligase and related enzymes gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2433 CH63_2434 CH63_2434 CH63_2434 2683001 2683234 + hypothetical protein conserved hypothetical protein gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2434 CH63_2435 CH63_2435 CH63_2435 2683286 2684368 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2435 CH63_2436 CH63_2436 CH63_2436 2684368 2687454 + acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2436 CH63_2437 CH63_2437 CH63_2437 2687815 2688147 - hypothetical protein conserved hypothetical protein gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2437 CH63_2438 CH63_2438 pemA pemA 2688950 2690035 + pectinesterase A [G] COG4677 Pectin methylesterase gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2438 CH63_2439 CH63_2439 CH63_2439 2690576 2691730 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2439 CH63_244 CH63_244 CH63_244 247814 248806 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[V] COG4170 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_244 CH63_2440 CH63_2440 CH63_2440 2691997 2692329 + hypothetical protein conserved hypothetical protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2440 CH63_2441 CH63_2441 CH63_2441 2692499 2692585 - tRNA-Leu tRNA gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2441 CH63_2442 CH63_2442 CH63_2442 2692930 2693886 - methyltransferase small domain protein [J] COG2813 16S RNA G1207 methylase RsmC gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2442 CH63_2443 CH63_2443 CH63_2443 2693999 2694436 + DNA polymerase III psi subunit [L] COG3050 DNA polymerase III%2C psi subunit gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2443 CH63_2444 CH63_2444 rimI rimI 2694381 2694824 + ribosomal-protein-alanine acetyltransferase rimI: ribosomal-protein-alanine acetyltransferase~[R] COG0456 Acetyltransferases gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2444 CH63_2445 CH63_2445 prfC prfC 2695003 2696592 + peptide chain release factor 3 prfC: peptide chain release factor 3~[J] COG4108 Peptide chain release factor RF-3 gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2445 CH63_2446 CH63_2446 CH63_2446 2696919 2697533 + BON domain protein [R] COG2823 Predicted periplasmic or secreted lipoprotein gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2446 CH63_2447 CH63_2447 CH63_2447 2697700 2697861 + hypothetical protein conserved hypothetical protein~[S] COG5487 Small integral membrane protein gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2447 CH63_2448 CH63_2448 CH63_2448 2698108 2699208 + patatin-like phospholipase family protein [R] COG4667 Predicted esterase of the alpha-beta hydrolase superfamily gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2448 CH63_2449 CH63_2449 CH63_2449 2699245 2699796 + tatD related DNase family protein [L] COG0084 Mg-dependent DNase gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2449 CH63_245 CH63_245 sapC sapC 248806 249696 - peptide transport system permease protein sapC [V] COG4171 ABC-type antimicrobial peptide transport system%2C permease component gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_245 CH63_2450 CH63_2450 CH63_2450 2699822 2700034 + tatD related DNase family protein [L] COG0084 Mg-dependent DNase gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2450 CH63_2451 CH63_2451 CH63_2451 2700569 2701840 + nucleoside transporter%2C NupC family protein nupC: nucleoside transporter%2C NupC family protein~[F] COG1972 Nucleoside permease gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2451 CH63_2452 CH63_2452 deoC deoC 2702448 2703245 + deoxyribose-phosphate aldolase deoC: deoxyribose-phosphate aldolase~[F] COG0274 Deoxyribose-phosphate aldolase gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2452 CH63_2453 CH63_2453 CH63_2453 2703366 2703908 + glycosyl transferase family%2C a/b domain protein [F] COG0213 Thymidine phosphorylase gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2453 CH63_2454 CH63_2454 CH63_2454 2703905 2704684 + glycosyl transferase family%2C a/b domain protein [F] COG0213 Thymidine phosphorylase gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2454 CH63_2455 CH63_2455 deoB deoB 2704816 2706039 + phosphopentomutase deoB: phosphopentomutase~[G] COG1015 Phosphopentomutase gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2455 CH63_2456 CH63_2456 deoD deoD 2706164 2706883 + purine nucleoside phosphorylase deoD: purine nucleoside phosphorylase~[F] COG0813 Purine-nucleoside phosphorylase gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2456 CH63_2457 CH63_2457 CH63_2457 2706995 2707696 - bacterial virulence factor hemolysin family protein [R] COG3726 Uncharacterized membrane protein affecting hemolysin expression gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2457 CH63_2458 CH63_2458 serB serB 2707928 2708908 + phosphoserine phosphatase SerB serB: phosphoserine phosphatase SerB~[E] COG0560 Phosphoserine phosphatase gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2458 CH63_2459 CH63_2459 radA radA 2708996 2710378 + DNA repair protein RadA sms: DNA repair protein RadA~[O] COG1066 Predicted ATP-dependent serine protease gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2459 CH63_246 CH63_246 sapB sapB 249683 250648 - peptide transport system permease protein sapB [V] COG4168 ABC-type antimicrobial peptide transport system%2C permease component gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_246 CH63_2460 CH63_2460 nadR nadR 2710537 2711808 + trifunctional NAD biosynthesis/regulator protein NadR [H] COG3172 Predicted ATPase/kinase involved in NAD metabolism gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2460 CH63_2461 CH63_2461 CH63_2461 2711965 2713095 + hypothetical protein conserved hypothetical protein~[S] COG3177 Uncharacterized conserved protein gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2461 CH63_2462 CH63_2462 CH63_2462 2713241 2714317 - ABC transporter family protein [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2462 CH63_2463 CH63_2463 CH63_2463 2714272 2714904 - ABC transporter family protein [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2463 CH63_2464 CH63_2464 CH63_2464 2715087 2715593 - ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2464 CH63_2465 CH63_2465 CH63_2465 2715599 2716876 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2465 CH63_2466 CH63_2466 CH63_2466 2716873 2717496 - hypothetical protein conserved hypothetical protein gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2466 CH63_2467 CH63_2467 CH63_2467 2717871 2720597 - HAD ATPase%2C P-type%2C IC family protein ATPase_P-type: HAD ATPase%2C P-type%2C IC family protein~[P] COG0474 Cation transport ATPase gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2467 CH63_2468 CH63_2468 CH63_2468 2721167 2723086 + soluble lytic murein transglycosylase L domain protein [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2468 CH63_2469 CH63_2469 CH63_2469 2723730 2724272 - hypothetical protein conserved hypothetical protein~[S] COG1986 Uncharacterized conserved protein gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2469 CH63_247 CH63_247 CH63_247 250645 252291 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_247 CH63_2470 CH63_2470 trpR trpR 2723341 2723733 + trp operon repressor trpR: trp operon repressor~[K] COG2973 Trp operon repressor gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2470 CH63_2471 CH63_2471 CH63_2471 2725010 2725876 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2471 CH63_2472 CH63_2472 CH63_2472 2724366 2725013 + histidine phosphatase super family protein [G] COG0406 Fructose-2%2C6-bisphosphatase gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2472 CH63_2473 CH63_2473 CH63_2473 2725920 2726105 + hypothetical protein conserved hypothetical protein gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2473 CH63_2474 CH63_2474 CH63_2474 2726102 2726569 + creA family protein [S] COG3045 Uncharacterized protein conserved in bacteria gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2474 CH63_2475 CH63_2475 CH63_2475 2726743 2727459 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2475 CH63_2476 CH63_2476 CH63_2476 2728017 2728124 + hypothetical protein conserved hypothetical protein gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2476 CH63_2477 CH63_2477 CH63_2477 2728563 2731021 + aspartate kinase domain protein%3BACT domain protein pseudogene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2477 CH63_2479 CH63_2479 thrB thrB 2731024 2731953 + homoserine kinase thrB: homoserine kinase~[E] COG0083 Homoserine kinase gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2479 CH63_248 CH63_248 CH63_248 252949 253407 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_248 CH63_2480 CH63_2480 thrC thrC 2731957 2733246 + threonine synthase thrC: threonine synthase~[E] COG0498 Threonine synthase gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2480 CH63_2481 CH63_2481 CH63_2481 2733521 2733631 + hypothetical protein conserved hypothetical protein gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2481 CH63_2482 CH63_2482 CH63_2482 2734063 2734839 - hypothetical protein conserved hypothetical protein~[S] COG3022 Uncharacterized protein conserved in bacteria gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2482 CH63_2483 CH63_2483 tal tal 2735371 2736324 + transaldolase talAB: transaldolase~[G] COG0176 Transaldolase gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2483 CH63_2484 CH63_2484 mog mog 2736612 2737199 + molybdopterin adenylyltransferase [H] COG0521 Molybdopterin biosynthesis enzymes gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2484 CH63_2485 CH63_2485 CH63_2485 2737327 2738715 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2485 CH63_2486 CH63_2486 CH63_2486 2738785 2741232 - beta/Gamma crystallin family protein gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2486 CH63_2487 CH63_2487 CH63_2487 2741521 2742132 - GPR1/FUN34/yaaH family protein [S] COG1584 Predicted membrane protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2487 CH63_2488 CH63_2488 dnaK dnaK 2742506 2744416 + chaperone protein DnaK prok_dnaK: chaperone protein DnaK~[O] COG0443 Molecular chaperone gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2488 CH63_2489 CH63_2489 dnaJ dnaJ 2744528 2745667 + chaperone protein DnaJ dnaJ_bact: chaperone protein DnaJ~[O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2489 CH63_249 CH63_249 pspF pspF 253572 254600 - psp operon transcriptional activator phageshock_pspF: psp operon transcriptional activator~[KT] COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_249 CH63_2490 CH63_2490 nhaA nhaA 2745910 2747094 + Na+/H+ antiporter NhaA nhaA: Na+/H+ antiporter NhaA~[P] COG3004 Na+/H+ antiporter gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2490 CH63_2491 CH63_2491 CH63_2491 2747230 2748123 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2491 CH63_2492 CH63_2492 rpsT rpsT 2748254 2748517 - ribosomal protein S20 S20: ribosomal protein S20~[J] COG0268 Ribosomal protein S20 gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2492 CH63_2493 CH63_2493 ribF ribF 2748932 2749870 + riboflavin biosynthesis protein RibF ribF: riboflavin biosynthesis protein RibF~[H] COG0196 FAD synthase gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2493 CH63_2494 CH63_2494 ileS ileS 2749902 2752718 + isoleucine--tRNA ligase ileS: isoleucine--tRNA ligase~[J] COG0060 Isoleucyl-tRNA synthetase gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2494 CH63_2495 CH63_2495 lspA lspA 2752718 2753227 + signal peptidase II lspA: signal peptidase II~[MU] COG0597 Lipoprotein signal peptidase gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2495 CH63_2496 CH63_2496 CH63_2496 2753295 2753753 + FKBP-type peptidyl-prolyl cis-trans isomerase family protein [O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2496 CH63_2497 CH63_2497 ispH ispH 2753734 2754687 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~[IM] COG0761 Penicillin tolerance protein gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2497 CH63_2498 CH63_2498 CH63_2498 2755069 2755527 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2498 CH63_2499 CH63_2499 dapB dapB 2755980 2756801 + 4-hydroxy-tetrahydrodipicolinate reductase dapB: 4-hydroxy-tetrahydrodipicolinate reductase~[E] COG0289 Dihydrodipicolinate reductase gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2499 CH63_25 CH63_25 CH63_25 25092 25364 + hypothetical protein conserved hypothetical protein~[S] COG3100 Uncharacterized protein conserved in bacteria gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_25 CH63_250 CH63_250 pspA pspA 254845 255510 + phage shock protein A phageshock_pspA: phage shock protein A~[KT] COG1842 Phage shock protein A (IM30)%2C suppresses sigma54-dependent transcription gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_250 CH63_2500 CH63_2500 carA carA 2757274 2758449 + carbamoyl-phosphate synthase%2C small subunit CPSaseIIsmall: carbamoyl-phosphate synthase%2C small subunit~[EF] COG0505 Carbamoylphosphate synthase small subunit gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2500 CH63_2501 CH63_2501 carB carB 2758465 2761698 + carbamoyl-phosphate synthase%2C large subunit CPSaseII_lrg: carbamoyl-phosphate synthase%2C large subunit~[EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2501 CH63_2502 CH63_2502 CH63_2502 2761926 2762540 - lysE type translocator family protein [E] COG1280 Putative threonine efflux protein gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2502 CH63_2503 CH63_2503 CH63_2503 2762864 2763664 + hypothetical protein conserved hypothetical protein~[S] COG2966 Uncharacterized conserved protein gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2503 CH63_2504 CH63_2504 CH63_2504 2763661 2764116 + hypothetical protein conserved hypothetical protein~[S] COG3610 Uncharacterized conserved protein gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2504 CH63_2505 CH63_2505 folA folA 2764266 2764748 + dihydrofolate reductase [H] COG0262 Dihydrofolate reductase gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2505 CH63_2506 CH63_2506 CH63_2506 2764960 2765418 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2506 CH63_2507 CH63_2507 CH63_2507 2765536 2766066 - bacterial inner membrane family protein gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2507 CH63_2508 CH63_2508 CH63_2508 2766220 2767710 - hypothetical protein D-galactarate dehydratase / Altronate hydrolase%2C C terminus family protein~[G] COG2721 Altronate dehydratase gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2508 CH63_2509 CH63_2509 CH63_2509 2767721 2769172 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2509 CH63_251 CH63_251 pspB pspB 255672 255899 + phage shock protein B phageshock_pspB: phage shock protein B gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_251 CH63_2510 CH63_2510 CH63_2510 2769371 2770780 - glucuronate isomerase family protein [G] COG1904 Glucuronate isomerase gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2510 CH63_2511 CH63_2511 CH63_2511 2771528 2772829 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2511 CH63_2512 CH63_2512 CH63_2512 2773092 2773886 + bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2512 CH63_2513 CH63_2513 CH63_2513 2774135 2774668 + putative lipoprotein gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2513 CH63_2514 CH63_2514 yqjA yqjA 2774946 2775644 + inner membrane protein YqjA [S] COG0586 Uncharacterized membrane-associated protein gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2514 CH63_2515 CH63_2515 CH63_2515 2775641 2776030 + hypothetical protein secD export N-terminal TM region family protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2515 CH63_2516 CH63_2516 CH63_2516 2776256 2776636 + hypothetical protein conserved hypothetical protein gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2516 CH63_2517 CH63_2517 CH63_2517 2776791 2777096 + hypothetical protein conserved hypothetical protein~[S] COG4575 Uncharacterized conserved protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2517 CH63_2518 CH63_2518 CH63_2518 2777099 2777494 + hypothetical protein conserved hypothetical protein~[S] COG5393 Predicted membrane protein gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2518 CH63_2519 CH63_2519 CH63_2519 2777491 2777775 + yqjK-like family protein gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2519 CH63_252 CH63_252 pspC pspC 255899 256258 + phage shock protein C phageshock_pspC: phage shock protein C~[KT] COG1983 Putative stress-responsive transcriptional regulator gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_252 CH63_2520 CH63_2520 CH63_2520 2778079 2778474 + SURF4 family protein [S] COG2259 Predicted membrane protein gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2520 CH63_2521 CH63_2521 CH63_2521 2778560 2778739 + hypothetical protein [O] COG0435 Predicted glutathione S-transferase gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2521 CH63_2522 CH63_2522 CH63_2522 2778753 2779775 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2522 CH63_2523 CH63_2523 CH63_2523 2779775 2780554 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2523 CH63_2524 CH63_2524 CH63_2524 2780816 2781202 - mutator mutT family protein mutt: mutator mutT family protein~[LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2524 CH63_2525 CH63_2525 secA secA 2781497 2784211 - preprotein translocase%2C SecA subunit secA: preprotein translocase%2C SecA subunit~[U] COG0653 Preprotein translocase subunit SecA (ATPase%2C RNA helicase) gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2525 CH63_2526 CH63_2526 CH63_2526 2784289 2784822 - secretion monitor family protein gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2526 CH63_2527 CH63_2527 CH63_2527 2784851 2785375 + hypothetical protein conserved hypothetical protein~[S] COG4701 Uncharacterized protein conserved in bacteria gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2527 CH63_2528 CH63_2528 lpxC lpxC 2785542 2786462 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~[M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2528 CH63_2529 CH63_2529 ftsZ ftsZ 2786562 2787713 - cell division protein FtsZ ftsZ: cell division protein FtsZ~[D] COG0206 Cell division GTPase gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2529 CH63_253 CH63_253 CH63_253 256343 256585 + phage shock PspD family protein gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_253 CH63_2530 CH63_2530 ftsA ftsA 2787786 2789042 - cell division protein FtsA ftsA: cell division protein FtsA~[D] COG0849 Actin-like ATPase involved in cell division gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2530 CH63_2531 CH63_2531 ftsQ ftsQ 2789069 2789896 - cell division protein FtsQ [M] COG1589 Cell division septal protein gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2531 CH63_2532 CH63_2532 CH63_2532 2789898 2790818 - D-alanine--D-alanine ligase family protein D_ala_D_alaTIGR: D-alanine--D-alanine ligase family protein~[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2532 CH63_2533 CH63_2533 murC murC 2790811 2792286 - UDP-N-acetylmuramate--L-alanine ligase murC: UDP-N-acetylmuramate--L-alanine ligase~[M] COG0773 UDP-N-acetylmuramate-alanine ligase gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2533 CH63_2534 CH63_2534 murG murG 2792424 2793494 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~[M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2534 CH63_2535 CH63_2535 ftsW ftsW 2793491 2794693 - cell division protein FtsW ftsW: cell division protein FtsW~[D] COG0772 Bacterial cell division membrane protein gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2535 CH63_2536 CH63_2536 murD murD 2794693 2796009 - UDP-N-acetylmuramoylalanine--D-glutamate ligase murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase~[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2536 CH63_2537 CH63_2537 mraY mraY 2796012 2797094 - phospho-N-acetylmuramoyl-pentapeptide-transferase mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase~[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2537 CH63_2538 CH63_2538 murF murF 2797088 2798464 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein~[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2538 CH63_2539 CH63_2539 murE murE 2798461 2799948 - UDP-N-acetylmuramyl-tripeptide synthetase family protein murE: UDP-N-acetylmuramyl-tripeptide synthetase family protein~[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2539 CH63_254 CH63_254 CH63_254 256566 257963 + hypothetical protein conserved hypothetical protein~[R] COG3106 Predicted ATPase gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_254 CH63_2540 CH63_2540 CH63_2540 2799935 2801698 - penicillin binding transpeptidase domain protein [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2540 CH63_2541 CH63_2541 ftsL ftsL 2801764 2802081 - cell division protein FtsL ftsL_broad: cell division protein FtsL~[D] COG3116 Cell division protein gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2541 CH63_2542 CH63_2542 rsmH rsmH 2802078 2803040 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase [M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2542 CH63_2543 CH63_2543 CH63_2543 2803043 2803501 - mraZ family protein [S] COG2001 Uncharacterized protein conserved in bacteria gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2543 CH63_2544 CH63_2544 CH63_2544 2804603 2805043 + hypothetical protein conserved hypothetical protein gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2544 CH63_2545 CH63_2545 fruR fruR 2805174 2806184 - fructose repressor [K] COG1609 Transcriptional regulators gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2545 CH63_2546 CH63_2546 CH63_2546 2806689 2807147 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2546 CH63_2547 CH63_2547 ilvN ilvN 2807346 2807840 - acetolactate synthase%2C small subunit acolac_sm: acetolactate synthase%2C small subunit~[E] COG0440 Acetolactate synthase%2C small (regulatory) subunit gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2547 CH63_2548 CH63_2548 ilvB ilvB 2807843 2809570 - acetolactate synthase%2C large subunit%2C biosynthetic type acolac_lg: acetolactate synthase%2C large subunit%2C biosynthetic type~[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2548 CH63_2549 CH63_2549 CH63_2549 2810030 2811835 - AMP-binding enzyme family protein [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2549 CH63_255 CH63_255 CH63_255 257960 259021 + hypothetical protein conserved hypothetical protein~[S] COG3768 Predicted membrane protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_255 CH63_2550 CH63_2550 CH63_2550 2812372 2813328 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2550 CH63_2551 CH63_2551 CH63_2551 2814006 2814221 + hypothetical protein conserved hypothetical protein gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2551 CH63_2552 CH63_2552 CH63_2552 2814650 2815108 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2552 CH63_2553 CH63_2553 leuA leuA 2815255 2816817 + 2-isopropylmalate synthase leuA_bact: 2-isopropylmalate synthase~[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2553 CH63_2554 CH63_2554 leuB leuB 2816820 2817911 + 3-isopropylmalate dehydrogenase leuB: 3-isopropylmalate dehydrogenase~[CE] COG0473 Isocitrate/isopropylmalate dehydrogenase gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2554 CH63_2555 CH63_2555 leuC leuC 2817913 2819343 + 3-isopropylmalate dehydratase%2C large subunit leuC: 3-isopropylmalate dehydratase%2C large subunit~[E] COG0065 3-isopropylmalate dehydratase large subunit gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2555 CH63_2556 CH63_2556 leuD leuD 2819358 2819960 + 3-isopropylmalate dehydratase%2C small subunit leuD: 3-isopropylmalate dehydratase%2C small subunit~[E] COG0066 3-isopropylmalate dehydratase small subunit gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2556 CH63_2557 CH63_2557 setA setA 2820201 2821382 - sugar efflux transporter A [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2557 CH63_2558 CH63_2558 CH63_2558 2822046 2823707 + bacterial extracellular solute-binding s%2C 5 Middle family protein [R] COG4533 ABC-type uncharacterized transport system%2C periplasmic component gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2558 CH63_2559 CH63_2559 CH63_2559 2823808 2824092 - putative membrane protein gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2559 CH63_256 CH63_256 CH63_256 259031 259489 - RES domain protein [S] COG5654 Uncharacterized conserved protein gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_256 CH63_2560 CH63_2560 thiB thiB 2824647 2825639 + thiamin/thiamine pyrophosphate ABC transporter%2C thiamin/thiamine pyrophospate-binding protein thiB: thiamin/thiamin pyrophosphate ABC transporter%2C thiamin/thiamin pyrophospate-binding protein~[H] COG4143 ABC-type thiamine transport system%2C periplasmic component gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2560 CH63_2561 CH63_2561 thiP thiP 2825615 2827222 + thiamine/thiamine pyrophosphate ABC transporter%2C permease protein thiP: thiamine/thiamine pyrophosphate ABC transporter%2C permease protein~[P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2561 CH63_2562 CH63_2562 thiQ thiQ 2827209 2827919 + thiamine ABC transporter%2C ATP-binding protein thiQ: thiamine ABC transporter%2C ATP-binding protein~[H] COG3840 ABC-type thiamine transport system%2C ATPase component gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2562 CH63_2563 CH63_2563 CH63_2563 2827988 2828755 - hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2563 CH63_2564 CH63_2564 CH63_2564 2828951 2831320 + DNA polymerase family B%2C exonuclease domain protein [L] COG0417 DNA polymerase elongation subunit (family B) gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2564 CH63_2565 CH63_2565 CH63_2565 2831781 2834687 + DEAD/DEAH box helicase family protein [KL] COG0553 Superfamily II DNA/RNA helicases%2C SNF2 family gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2565 CH63_2566 CH63_2566 CH63_2566 2834943 2835296 - hypothetical protein conserved hypothetical protein gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2566 CH63_2567 CH63_2567 CH63_2567 2835318 2838758 - intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2567 CH63_2568 CH63_2568 CH63_2568 2838820 2840428 - type IV/VI secretion system%2C DotU family domain protein pseudogene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2568 CH63_257 CH63_257 CH63_257 259551 259997 - hypothetical protein conserved hypothetical protein~[S] COG5642 Uncharacterized conserved protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_257 CH63_2570 CH63_2570 CH63_2570 2840425 2841780 - hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2570 CH63_2571 CH63_2571 CH63_2571 2841900 2842391 - type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2571 CH63_2572 CH63_2572 CH63_2572 2842384 2842749 - hypothetical protein conserved hypothetical protein gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2572 CH63_2573 CH63_2573 CH63_2573 2842755 2843372 - hypothetical protein conserved hypothetical protein gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2573 CH63_2574 CH63_2574 CH63_2574 2843365 2844468 - pentapeptide repeats family protein [S] COG1357 Uncharacterized low-complexity proteins gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2574 CH63_2575 CH63_2575 CH63_2575 2844494 2846713 - pentapeptide repeats family protein [S] COG1357 Uncharacterized low-complexity proteins gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2575 CH63_2576 CH63_2576 CH63_2576 2846726 2849074 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2576 CH63_2577 CH63_2577 clpV clpV 2849178 2851766 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2577 CH63_2578 CH63_2578 CH63_2578 2851784 2852767 - hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2578 CH63_2579 CH63_2579 CH63_2579 2852760 2854604 - hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2579 CH63_258 CH63_258 tyrR tyrR 260319 261896 + transcriptional regulatory protein tyrR [KE] COG3283 Transcriptional regulator of aromatic amino acids metabolism gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_258 CH63_2580 CH63_2580 CH63_2580 2854637 2855080 - 25-like lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2580 CH63_2581 CH63_2581 CH63_2581 2855154 2855672 - hypothetical protein conserved hypothetical protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2581 CH63_2582 CH63_2582 CH63_2582 2855835 2857337 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2582 CH63_2583 CH63_2583 CH63_2583 2857346 2857906 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2583 CH63_2584 CH63_2584 CH63_2584 2857917 2858903 - hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2584 CH63_2585 CH63_2585 CH63_2585 2859260 2860003 + hypothetical protein conserved hypothetical protein~[S] COG5419 Uncharacterized conserved protein gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2585 CH63_2586 CH63_2586 CH63_2586 2861226 2861846 + RNA pseudouridylate synthase family protein [J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2586 CH63_2587 CH63_2587 djlA djlA 2862144 2862977 - dnaJ-like protein djlA [O] COG1076 DnaJ-domain-containing proteins 1 gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2587 CH63_2588 CH63_2588 CH63_2588 2863252 2865504 + organic solvent tolerance family protein [M] COG1452 Organic solvent tolerance protein OstA gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2588 CH63_2589 CH63_2589 CH63_2589 2865572 2866876 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2589 CH63_259 CH63_259 CH63_259 262043 262501 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_259 CH63_2590 CH63_2590 pdxA pdxA 2866860 2867855 + 4-hydroxythreonine-4-phosphate dehydrogenase PdxA pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA~[H] COG1995 Pyridoxal phosphate biosynthesis protein gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2590 CH63_2591 CH63_2591 rsmA rsmA 2867848 2868666 + ribosomal RNA small subunit methyltransferase A ksgA: ribosomal RNA small subunit methyltransferase A~[J] COG0030 Dimethyladenosine transferase (rRNA methylation) gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2591 CH63_2592 CH63_2592 CH63_2592 2868680 2869057 + hypothetical protein conserved hypothetical protein~[P] COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2592 CH63_2593 CH63_2593 apaH apaH 2869074 2869943 + Diadenosine tetraphosphatase and related serine/threonine protein phosphatase apaH: bis~[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases%3B bis gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2593 CH63_2594 CH63_2594 CH63_2594 2870033 2870497 - hypothetical protein conserved hypothetical protein gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2594 CH63_2595 CH63_2595 CH63_2595 2871380 2871838 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2595 CH63_2596 CH63_2596 CH63_2596 2871828 2872088 - hypothetical protein conserved hypothetical protein gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2596 CH63_2597 CH63_2597 CH63_2597 2872039 2873295 - dicarboxylate symporter family protein sodium:dicarboxylate symporter family protein~[E] COG3633 Na+/serine symporter gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2597 CH63_2598 CH63_2598 CH63_2598 2873831 2874826 - oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2598 CH63_2599 CH63_2599 CH63_2599 2875029 2875538 - hypothetical protein conserved hypothetical protein~[R] COG1451 Predicted metal-dependent hydrolase gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2599 CH63_26 CH63_26 CH63_26 25505 25717 + putative membrane-bound lytic murein transglycosylase B [M] COG2951 Membrane-bound lytic murein transglycosylase B gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_26 CH63_260 CH63_260 tpx tpx 262754 263257 - thiol peroxidase [O] COG2077 Peroxiredoxin gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_260 CH63_2600 CH63_2600 CH63_2600 2875777 2878761 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2600 CH63_2601 CH63_2601 CH63_2601 2879230 2880417 + methyltransferase small domain protein [J] COG2813 16S RNA G1207 methylase RsmC gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2601 CH63_2602 CH63_2602 CH63_2602 2880533 2882554 - flavin oxidoreductase / NADH oxidase family protein NADH:flavin oxidoreductase / NADH oxidase family protein~[C] COG1902 NADH:flavin oxidoreductases%2C Old Yellow Enzyme family gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2602 CH63_2603 CH63_2603 hdeD hdeD 2882767 2883336 - protein hdeD [S] COG3247 Uncharacterized conserved protein gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2603 CH63_2604 CH63_2604 CH63_2604 2883727 2885226 - kinase domain protein [RTKL] COG0515 Serine/threonine protein kinase gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2604 CH63_2605 CH63_2605 CH63_2605 2885258 2886991 - phosphatase 2C family protein gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2605 CH63_2606 CH63_2606 CH63_2606 2887047 2888030 - von Willebrand factor type A domain protein [R] COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2606 CH63_2607 CH63_2607 CH63_2607 2888132 2888770 - von Willebrand factor type A domain protein [R] COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2607 CH63_2608 CH63_2608 CH63_2608 2888772 2889413 - terD domain protein [T] COG2310 Uncharacterized proteins involved in stress response%2C homologs of TerZ and putative cAMP-binding protein CABP1 gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2608 CH63_2609 CH63_2609 CH63_2609 2889446 2890084 - von Willebrand factor type A domain protein [R] COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2609 CH63_261 CH63_261 CH63_261 263420 264394 + hypothetical protein mandelate racemase / muconate lactonizing enzyme%2C N-terminal domain protein~[MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_261 CH63_2610 CH63_2610 CH63_2610 2890799 2892487 + surface antigen family protein [U] COG2831 Hemolysin activation/secretion protein gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2610 CH63_2611 CH63_2611 CH63_2611 2892532 2901759 + hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2611 CH63_2612 CH63_2612 CH63_2612 2901941 2902420 + putative adhesin/hemolysin [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2612 CH63_2613 CH63_2613 CH63_2613 2902417 2902650 + putative membrane protein gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2613 CH63_2614 CH63_2614 CH63_2614 2902916 2903143 + hypothetical protein conserved hypothetical protein gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2614 CH63_2615 CH63_2615 CH63_2615 2903239 2903655 + immunity 38 family protein gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2615 CH63_2616 CH63_2616 CH63_2616 2903688 2904443 + putative adhesin/hemolysin [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2616 CH63_2617 CH63_2617 CH63_2617 2904939 2907224 - autotransporter beta-domain protein gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2617 CH63_2618 CH63_2618 CH63_2618 2907284 2908279 - metA-pathway of phenol degradation family protein gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2618 CH63_2619 CH63_2619 CH63_2619 2908381 2909760 - glucoamylase family protein gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2619 CH63_262 CH63_262 CH63_262 264436 265143 - zinc carboxypeptidase family protein [E] COG2866 Predicted carboxypeptidase gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_262 CH63_2620 CH63_2620 CH63_2620 2910086 2911201 + ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2620 CH63_2621 CH63_2621 CH63_2621 2911284 2914637 + hypothetical protein conserved hypothetical protein~[G] COG3459 Cellobiose phosphorylase gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2621 CH63_2622 CH63_2622 CH63_2622 2914746 2915732 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2622 CH63_2623 CH63_2623 CH63_2623 2915809 2917053 + bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2623 CH63_2624 CH63_2624 CH63_2624 2917107 2917988 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2624 CH63_2625 CH63_2625 CH63_2625 2917988 2918806 + binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2625 CH63_2626 CH63_2626 CH63_2626 2918806 2919318 + putative exported protein gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2626 CH63_2627 CH63_2627 CH63_2627 2919369 2921552 + hypothetical protein glycosyl hydrolase family 3 C-terminal domain protein~[G] COG1472 Beta-glucosidase-related glycosidases gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2627 CH63_2628 CH63_2628 CH63_2628 2921616 2923142 - outer membrane efflux family protein [MU] COG1538 Outer membrane protein gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2628 CH63_2629 CH63_2629 CH63_2629 2923147 2925048 - fusaric acid resistance family protein [S] COG1289 Predicted membrane protein gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2629 CH63_263 CH63_263 CH63_263 265584 267200 + bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_263 CH63_2630 CH63_2630 CH63_2630 2925032 2926081 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[V] COG1566 Multidrug resistance efflux pump gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2630 CH63_2631 CH63_2631 CH63_2631 2926091 2926426 - putative membrane protein gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2631 CH63_2632 CH63_2632 CH63_2632 2926423 2926623 - hypothetical protein conserved hypothetical protein gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2632 CH63_2633 CH63_2633 CH63_2633 2927389 2928621 + beta-eliminating lyase family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2633 CH63_2634 CH63_2634 CH63_2634 2928614 2930064 + na+/H+ antiporter family protein%3Bputative membrane protein pseudogene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2634 CH63_2636 CH63_2636 CH63_2636 2930077 2930514 + polyketide cyclase / dehydrase and lipid transport family protein gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2636 CH63_2637 CH63_2637 CH63_2637 2930648 2931274 + HTH domain protein [S] COG2964 Uncharacterized protein conserved in bacteria gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2637 CH63_2638 CH63_2638 CH63_2638 2931290 2931670 + endoribonuclease L-PSP [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2638 CH63_2639 CH63_2639 CH63_2639 2931955 2932359 + endoribonuclease L-PSP family protein [J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2639 CH63_264 CH63_264 CH63_264 267443 268426 + corA-like Mg2+ transporter family protein [P] COG0598 Mg2+ and Co2+ transporters gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_264 CH63_2640 CH63_2640 CH63_2640 2932574 2932876 - mono-oxygenase ydhR family protein gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2640 CH63_2641 CH63_2641 CH63_2641 2933136 2933852 - thioredoxin family protein [O] COG3531 Predicted protein-disulfide isomerase gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2641 CH63_2642 CH63_2642 CH63_2642 2934014 2934946 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2642 CH63_2643 CH63_2643 CH63_2643 2935337 2935600 + putative fIC domain-containing protein gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2643 CH63_2644 CH63_2644 CH63_2644 2935905 2936063 - hypothetical protein conserved hypothetical protein gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2644 CH63_2645 CH63_2645 CH63_2645 2935597 2935908 + fic/DOC family protein [S] COG3177 Uncharacterized conserved protein gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2645 CH63_2646 CH63_2646 CH63_2646 2936619 2936849 + hypothetical protein conserved hypothetical protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2646 CH63_2647 CH63_2647 CH63_2647 2936982 2938364 + putative hNH endonuclease gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2647 CH63_2648 CH63_2648 CH63_2648 2938373 2938843 + hypothetical protein conserved hypothetical protein gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2648 CH63_2649 CH63_2649 CH63_2649 2938870 2939325 + hypothetical protein conserved hypothetical protein gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2649 CH63_265 CH63_265 CH63_265 268800 269639 - merR regulatory family protein [K] COG0789 Predicted transcriptional regulators gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_265 CH63_2650 CH63_2650 CH63_2650 2939342 2939632 + terminase small subunit [L] COG3728 Phage terminase%2C small subunit gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2650 CH63_2651 CH63_2651 CH63_2651 2939610 2939948 + hypothetical protein conserved hypothetical protein gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2651 CH63_2652 CH63_2652 CH63_2652 2940194 2940270 - tRNA-Met tRNA gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2652 CH63_2653 CH63_2653 rpoD rpoD 2940466 2942304 - RNA polymerase sigma factor RpoD rpoD_Cterm: RNA polymerase sigma factor RpoD~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2653 CH63_2654 CH63_2654 dnaG dnaG 2942462 2944210 - DNA primase dnaG: DNA primase~[L] COG0358 DNA primase (bacterial type) gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2654 CH63_2655 CH63_2655 rpsU rpsU 2944346 2944561 - ribosomal protein S21 S21p: ribosomal protein S21~[J] COG0828 Ribosomal protein S21 gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2655 CH63_2656 CH63_2656 tsaD tsaD 2944967 2945980 + tRNA threonylcarbamoyl adenosine modification protein TsaD T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD~[O] COG0533 Metal-dependent proteases with possible chaperone activity gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2656 CH63_2657 CH63_2657 plsY plsY 2946226 2946876 - acyl-phosphate glycerol 3-phosphate acyltransferase [S] COG0344 Predicted membrane protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2657 CH63_2658 CH63_2658 folB folB 2946984 2947343 + dihydroneopterin aldolase folB: dihydroneopterin aldolase~[H] COG1539 Dihydroneopterin aldolase gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2658 CH63_2659 CH63_2659 uppP uppP 2947617 2948435 + undecaprenyl-diphosphatase UppP undec_PP_bacA: undecaprenyl-diphosphatase UppP~[V] COG1968 Uncharacterized bacitracin resistance protein gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2659 CH63_266 CH63_266 CH63_266 269951 270955 - alpha/beta hydrolase fold family protein [I] COG0657 Esterase/lipase gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_266 CH63_2660 CH63_2660 CH63_2660 2948671 2949909 - poly A polymerase head domain protein [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2660 CH63_2661 CH63_2661 CH63_2661 2950069 2950692 - bacterial SH3 domain protein [T] COG3103 SH3 domain protein gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2661 CH63_2662 CH63_2662 CH63_2662 2950996 2952165 + CYTH domain protein [S] COG3025 Uncharacterized conserved protein gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2662 CH63_2663 CH63_2663 CH63_2663 2952474 2955329 + glutamate-ammonia ligase adenylyltransferase family protein [OT] COG1391 Glutamine synthetase adenylyltransferase gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2663 CH63_2664 CH63_2664 rfaE1 rfaE1 2955464 2956894 + bifunctional protein RfaE%2C domain I rfaE_dom_I: bifunctional protein RfaE%2C domain I~[M] COG2870 ADP-heptose synthase%2C bifunctional sugar kinase/adenylyltransferase gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2664 CH63_2665 CH63_2665 CH63_2665 2956931 2958181 + amino acid permease family protein [E] COG0531 Amino acid transporters gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2665 CH63_2666 CH63_2666 CH63_2666 2958506 2958787 - membrane fusogenic activity family protein [S] COG2960 Uncharacterized protein conserved in bacteria gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2666 CH63_2667 CH63_2667 CH63_2667 2958823 2959167 - hypothetical protein gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2667 CH63_2668 CH63_2668 ribB ribB 2959356 2960009 + 3%2C4-dihydroxy-2-butanone-4-phosphate synthase ribB: 3%2C4-dihydroxy-2-butanone-4-phosphate synthase~[H] COG0108 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2668 CH63_2669 CH63_2669 CH63_2669 2960434 2961216 + catalytic LigB subunit of aromatic ring-opening dioxygenase family protein [S] COG3384 Uncharacterized conserved protein gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2669 CH63_267 CH63_267 CH63_267 269843 270052 + hypothetical protein conserved hypothetical protein gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_267 CH63_2670 CH63_2670 CH63_2670 2961623 2962783 - glutathionylspermidine synthase preATP-grasp family protein [E] COG0754 Glutathionylspermidine synthase gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2670 CH63_2671 CH63_2671 CH63_2671 2962793 2963476 - hypothetical protein conserved hypothetical protein~[S] COG5463 Predicted integral membrane protein gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2671 CH63_2672 CH63_2672 CH63_2672 2963545 2963715 + hypothetical protein conserved hypothetical protein gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2672 CH63_2673 CH63_2673 CH63_2673 2963780 2965177 - type I secretion outer membrane%2C TolC family protein type_I_sec_TolC: type I secretion outer membrane%2C TolC family protein~[MU] COG1538 Outer membrane protein gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2673 CH63_2674 CH63_2674 CH63_2674 2965573 2966205 + nudix-type nucleoside diphosphatase%2C YffH/AdpP family protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2674 CH63_2675 CH63_2675 CH63_2675 2966239 2966664 + hypothetical protein conserved hypothetical protein~[S] COG3151 Uncharacterized protein conserved in bacteria gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2675 CH63_2676 CH63_2676 CH63_2676 2966746 2967516 + calcineurin-like phosphoesterase family protein [R] COG1409 Predicted phosphohydrolases gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2676 CH63_2677 CH63_2677 CH63_2677 2967574 2968155 + hypothetical protein conserved hypothetical protein~[R] COG3150 Predicted esterase gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2677 CH63_2678 CH63_2678 parE parE 2968257 2970152 + DNA topoisomerase IV%2C B subunit parE_Gneg: DNA topoisomerase IV%2C B subunit~[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C B subunit gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2678 CH63_2679 CH63_2679 CH63_2679 2970156 2971067 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2679 CH63_268 CH63_268 CH63_268 271226 272167 - PP-loop family protein [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_268 CH63_2680 CH63_2680 CH63_2680 2971125 2971709 - flavodoxin-like fold family protein [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2680 CH63_2681 CH63_2681 parC parC 2972013 2974286 + DNA topoisomerase IV%2C A subunit parC_Gneg: DNA topoisomerase IV%2C A subunit~[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2681 CH63_2682 CH63_2682 CH63_2682 2974575 2975306 + 1-acylglycerol-3-phosphate O-acyltransferases domain protein AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases domain protein~[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2682 CH63_2683 CH63_2683 CH63_2683 2975485 2976909 + multicopper oxidase family protein [Q] COG2132 Putative multicopper oxidases gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2683 CH63_2684 CH63_2684 CH63_2684 2977217 2978764 + radical SAM superfamily protein [C] COG1032 Fe-S oxidoreductase gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2684 CH63_2685 CH63_2685 CH63_2685 2978749 2979561 + hypothetical protein conserved hypothetical protein~[C] COG1032 Fe-S oxidoreductase gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2685 CH63_2686 CH63_2686 CH63_2686 2979583 2980416 - aldo/keto reductase family protein [R] COG0656 Aldo/keto reductases%2C related to diketogulonate reductase gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2686 CH63_2687 CH63_2687 yqhD yqhD 2980835 2981992 - alcohol dehydrogenase YqhD [C] COG1979 Uncharacterized oxidoreductases%2C Fe-dependent alcohol dehydrogenase family gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2687 CH63_2688 CH63_2688 CH63_2688 2982390 2983283 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2688 CH63_2689 CH63_2689 CH63_2689 2983375 2984037 - hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2689 CH63_269 CH63_269 nifJ nifJ 272442 275975 - ferredoxin (flavodoxin) oxidoreductase pyruvate:ferredoxin (flavodoxin) oxidoreductase~pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase~[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C gamma subunit gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_269 CH63_2690 CH63_2690 metC metC 2984230 2985441 - cystathionine beta-lyase cysta_beta_ly_B: cystathionine beta-lyase~[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2690 CH63_2691 CH63_2691 exbB exbB 2985920 2986957 + tonB-system energizer ExbB exbB: tonB-system energizer ExbB~[U] COG0811 Biopolymer transport proteins gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2691 CH63_2692 CH63_2692 CH63_2692 2987338 2987523 - hypothetical protein conserved hypothetical protein gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2692 CH63_2693 CH63_2693 exbD exbD 2986961 2987392 + TonB system transport protein ExbD exbD_1: TonB system transport protein ExbD~[U] COG0848 Biopolymer transport protein gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2693 CH63_2694 CH63_2694 CH63_2694 2987489 2989045 - von Willebrand factor type A domain protein [U] COG4961 Flp pilus assembly protein TadG gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2694 CH63_2695 CH63_2695 CH63_2695 2989070 2989642 - putative tight adherance operon protein gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2695 CH63_2696 CH63_2696 CH63_2696 2989626 2990099 - tadE-like family protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2696 CH63_2697 CH63_2697 CH63_2697 2990096 2990866 - TPR repeat family protein [U] COG5010 Flp pilus assembly protein TadD%2C contains TPR repeats gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2697 CH63_2698 CH63_2698 CH63_2698 2990850 2991683 - type II secretion system (T2SS)%2C F family protein [NU] COG2064 Flp pilus assembly protein TadC gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2698 CH63_2699 CH63_2699 CH63_2699 2991680 2992555 - type II secretion system (T2SS)%2C F family protein [U] COG4965 Flp pilus assembly protein TadB gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2699 CH63_27 CH63_27 CH63_27 25660 26589 + lytic murein transglycosylase family protein mltB_2: lytic murein transglycosylase family protein~[M] COG2951 Membrane-bound lytic murein transglycosylase B gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_27 CH63_270 CH63_270 CH63_270 276454 276786 + small Multidrug Resistance family protein [P] COG2076 Membrane transporters of cations and cationic drugs gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_270 CH63_2700 CH63_2700 CH63_2700 2992552 2993838 - ATP synthase alpha/beta family%2C nucleotide-binding domain protein [U] COG4962 Flp pilus assembly protein%2C ATPase CpaF gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2700 CH63_2701 CH63_2701 CH63_2701 2993850 2994977 - hypothetical protein conserved hypothetical protein~[U] COG4963 Flp pilus assembly protein%2C ATPase CpaE gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2701 CH63_2702 CH63_2702 CH63_2702 2994988 2995278 - hypothetical protein conserved hypothetical protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2702 CH63_2703 CH63_2703 CH63_2703 2995275 2995724 - bacterial type II and III secretion system family protein [U] COG4964 Flp pilus assembly protein%2C secretin CpaC gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2703 CH63_2704 CH63_2704 CH63_2704 2995739 2996593 - bacterial type II and III secretion system family protein [U] COG4964 Flp pilus assembly protein%2C secretin CpaC gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2704 CH63_2705 CH63_2705 CH63_2705 2996590 2997456 - putative membrane protein gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2705 CH63_2706 CH63_2706 CH63_2706 2997508 2997930 - type IV leader peptidase family protein [OU] COG4960 Flp pilus assembly protein%2C protease CpaA gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2706 CH63_2707 CH63_2707 CH63_2707 2998130 2998588 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2707 CH63_2708 CH63_2708 CH63_2708 2998941 3001421 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2708 CH63_2709 CH63_2709 papD papD 3001439 3002158 + chaperone protein papD [NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2709 CH63_271 CH63_271 CH63_271 276846 277505 - mgtC family protein [S] COG1285 Uncharacterized membrane protein gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_271 CH63_2710 CH63_2710 CH63_2710 3002183 3003289 + fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2710 CH63_2711 CH63_2711 CH63_2711 3003501 3004580 - periplasmic binding family protein [P] COG4592 ABC-type Fe2+-enterobactin transport system%2C periplasmic component gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2711 CH63_2712 CH63_2712 CH63_2712 3005436 3006431 + putative exported protein [S] COG4461 Uncharacterized protein conserved in bacteria%2C putative lipoprotein gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2712 CH63_2713 CH63_2713 CH63_2713 3006523 3007092 - hypothetical protein conserved hypothetical protein gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2713 CH63_2714 CH63_2714 CH63_2714 3007295 3009391 - FHIPEP family protein [NU] COG1298 Flagellar biosynthesis pathway%2C component FlhA gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2714 CH63_2715 CH63_2715 flhB flhB 3009378 3010511 - flagellar biosynthetic protein FlhB flhB: flagellar biosynthetic protein FlhB~[NU] COG1377 Flagellar biosynthesis pathway%2C component FlhB gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2715 CH63_2716 CH63_2716 fliR fliR 3010511 3011284 - flagellar biosynthetic protein FliR fliR: flagellar biosynthetic protein FliR~[NU] COG1684 Flagellar biosynthesis pathway%2C component FliR gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2716 CH63_2717 CH63_2717 fliQ fliQ 3011291 3011563 - flagellar biosynthetic protein FliQ fliQ: flagellar biosynthetic protein FliQ~[NU] COG1987 Flagellar biosynthesis pathway%2C component FliQ gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2717 CH63_2718 CH63_2718 fliP fliP 3011565 3012335 - flagellar biosynthetic protein FliP fliP: flagellar biosynthetic protein FliP~[NU] COG1338 Flagellar biosynthesis pathway%2C component FliP gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2718 CH63_2719 CH63_2719 fliN fliN 3012332 3012745 - flagellar motor switch protein FliN fliN: flagellar motor switch protein FliN~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2719 CH63_272 CH63_272 CH63_272 277790 278131 + hypothetical protein conserved hypothetical protein~[R] COG3042 Putative hemolysin gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_272 CH63_2720 CH63_2720 CH63_2720 3012738 3013637 - surface presentation of antigens family protein gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2720 CH63_2721 CH63_2721 CH63_2721 3014163 3015188 + AAA domain family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2721 CH63_2722 CH63_2722 fliE fliE 3015205 3015585 + flagellar hook-basal body complex protein FliE fliE: flagellar hook-basal body complex protein FliE~[NU] COG1677 Flagellar hook-basal body protein gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2722 CH63_2723 CH63_2723 fliF fliF 3015595 3017235 + flagellar M-ring protein FliF fliF: flagellar M-ring protein FliF~[NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2723 CH63_2724 CH63_2724 CH63_2724 3017207 3018250 + fliG middle domain protein [N] COG1536 Flagellar motor switch protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2724 CH63_2725 CH63_2725 CH63_2725 3018255 3018971 + hypothetical protein essential Yae1%2C N terminal family protein~[NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2725 CH63_2726 CH63_2726 CH63_2726 3018964 3020304 + ATPase%2C FliI/YscN family protein fliI_yscN: ATPase%2C FliI/YscN family protein~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2726 CH63_2727 CH63_2727 fliJ fliJ 3020308 3020745 + flagellar export protein FliJ flagell_FliJ: flagellar export protein FliJ gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2727 CH63_2728 CH63_2728 CH63_2728 3021073 3021498 - flgN family protein gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2728 CH63_2729 CH63_2729 flgM flgM 3021505 3021771 - flagellar biosynthesis anti-sigma factor FlgM flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2729 CH63_273 CH63_273 hslJ hslJ 278189 278641 - heat shock protein hslJ [O] COG3187 Heat shock protein gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_273 CH63_2730 CH63_2730 flgA flgA 3022000 3022848 - flagella basal body P-ring formation protein FlgA flgA_cterm: flagella basal body P-ring formation protein FlgA~[NO] COG1261 Flagellar basal body P-ring biosynthesis protein gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2730 CH63_2731 CH63_2731 flgB flgB 3022906 3023352 + flagellar basal-body rod protein FlgB flgB: flagellar basal-body rod protein FlgB~[N] COG1815 Flagellar basal body protein gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2731 CH63_2732 CH63_2732 flgC flgC 3023355 3023780 + flagellar basal-body rod protein FlgC flgC: flagellar basal-body rod protein FlgC~[N] COG1558 Flagellar basal body rod protein gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2732 CH63_2733 CH63_2733 CH63_2733 3023783 3024439 + hypothetical protein flagellar hook capping - N-terminal region family protein~[N] COG1843 Flagellar hook capping protein gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2733 CH63_2734 CH63_2734 CH63_2734 3024494 3025735 + flagellar hook-basal body family protein flgEFG_subfam: flagellar hook-basal body family protein~[N] COG1749 Flagellar hook protein FlgE gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2734 CH63_2735 CH63_2735 flgF flgF 3025735 3026466 + flagellar basal-body rod protein FlgF flgF: flagellar basal-body rod protein FlgF~[N] COG4787 Flagellar basal body rod protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2735 CH63_2736 CH63_2736 flgG flgG 3026534 3027319 + flagellar basal-body rod protein FlgG flgG_G_neg: flagellar basal-body rod protein FlgG~[N] COG4786 Flagellar basal body rod protein gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2736 CH63_2737 CH63_2737 CH63_2737 3027381 3028019 + flagellar L-ring family protein [N] COG2063 Flagellar basal body L-ring protein gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2737 CH63_2738 CH63_2738 CH63_2738 3028150 3029208 + flagellar P-ring family protein [N] COG1706 Flagellar basal-body P-ring protein gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2738 CH63_2739 CH63_2739 CH63_2739 3029218 3029511 + rod binding family protein [MNO] COG3951 Rod binding protein gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2739 CH63_274 CH63_274 CH63_274 278711 279703 - D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_274 CH63_2740 CH63_2740 flgK flgK 3029624 3030985 + flagellar hook-associated protein FlgK flgK_ends: flagellar hook-associated protein FlgK~[N] COG1256 Flagellar hook-associated protein gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2740 CH63_2741 CH63_2741 flgL flgL 3031014 3031937 + flagellar hook-associated protein 3 flagell_flgL: flagellar hook-associated protein 3~[N] COG1344 Flagellin and related hook-associated proteins gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2741 CH63_2742 CH63_2742 CH63_2742 3031949 3032962 + putative flagellar hook associated protein lafW gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2742 CH63_2743 CH63_2743 CH63_2743 3033126 3033572 - hypothetical protein conserved hypothetical protein gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2743 CH63_2744 CH63_2744 CH63_2744 3033553 3034599 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2744 CH63_2745 CH63_2745 CH63_2745 3035225 3036448 + hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2745 CH63_2746 CH63_2746 CH63_2746 3036542 3037057 + transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2746 CH63_2747 CH63_2747 CH63_2747 3037111 3037896 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2747 CH63_2748 CH63_2748 pnp pnp 3038163 3040280 + polyribonucleotide nucleotidyltransferase polynuc_phos: polyribonucleotide nucleotidyltransferase~[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2748 CH63_2749 CH63_2749 CH63_2749 3040405 3041289 + tetratricopeptide repeat family protein [R] COG4785 Lipoprotein NlpI%2C contains TPR repeats gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2749 CH63_275 CH63_275 CH63_275 279969 282665 + dicarboxylate transport family protein gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_275 CH63_2750 CH63_2750 CH63_2750 3041476 3043470 + DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2750 CH63_2751 CH63_2751 CH63_2751 3043706 3044074 + hypothetical protein conserved hypothetical protein~[S] COG4679 Phage-related protein gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2751 CH63_2752 CH63_2752 CH63_2752 3044098 3044409 + helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2752 CH63_2753 CH63_2753 CH63_2753 3044664 3045719 - luciferase oxidoreductase%2C group 1 family protein oxido_grp_1: luciferase oxidoreductase%2C group 1 family protein~[C] COG2141 Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2753 CH63_2754 CH63_2754 CH63_2754 3044409 3044699 + hypothetical protein conserved hypothetical protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2754 CH63_2755 CH63_2755 CH63_2755 3046257 3047386 + efflux transporter%2C RND family%2C MFP subunit pseudogene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2755 CH63_2757 CH63_2757 CH63_2757 3047390 3050515 + RND transporter%2C hydrophobe/amphiphile efflux-1 family protein 2A0602: RND transporter%2C hydrophobe/amphiphile efflux-1 family protein~[V] COG0841 Cation/multidrug efflux pump gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2757 CH63_2758 CH63_2758 CH63_2758 3050517 3051923 + efflux transporter%2C outer membrane factor (OMF) lipo%2C NodT family protein outer_NodT: efflux transporter%2C outer membrane factor (OMF) lipo%2C NodT family protein~[MU] COG1538 Outer membrane protein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2758 CH63_2759 CH63_2759 CH63_2759 3052064 3052942 - peptidase U32 family protein [O] COG0826 Collagenase and related proteases gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2759 CH63_276 CH63_276 CH63_276 282662 282856 + ynbE-like lipofamily protein gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_276 CH63_2760 CH63_2760 CH63_2760 3052954 3053949 - hypothetical protein conserved hypothetical protein~[O] COG0826 Collagenase and related proteases gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2760 CH63_2761 CH63_2761 CH63_2761 3054265 3054786 + hypothetical protein alkyl sulfatase C-terminal family protein~[I] COG3154 Putative lipid carrier protein gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2761 CH63_2762 CH63_2762 CH63_2762 3054783 3055286 + acetyltransferase family protein [R] COG3153 Predicted acetyltransferase gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2762 CH63_2763 CH63_2763 CH63_2763 3055461 3055748 - GIY-YIG catalytic domain protein [L] COG2827 Predicted endonuclease containing a URI domain gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2763 CH63_2764 CH63_2764 CH63_2764 3055979 3057997 - alginate lyase family protein gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2764 CH63_2765 CH63_2765 CH63_2765 3058021 3059241 - alginate lyase family protein gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2765 CH63_2766 CH63_2766 CH63_2766 3059823 3061118 + bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2766 CH63_2767 CH63_2767 CH63_2767 3061126 3062010 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2767 CH63_2768 CH63_2768 CH63_2768 3062029 3062868 + binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2768 CH63_2769 CH63_2769 CH63_2769 3062880 3063974 + ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2769 CH63_277 CH63_277 CH63_277 282932 283237 + hypothetical protein conserved hypothetical protein~[S] COG3784 Uncharacterized protein conserved in bacteria gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_277 CH63_2770 CH63_2770 CH63_2770 3063989 3065155 + alginate lyase family protein gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2770 CH63_2771 CH63_2771 CH63_2771 3065254 3065697 + hypothetical protein putative uPF0306 protein YPO3467/y0717/YP_0616~[S] COG3787 Uncharacterized protein conserved in bacteria gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2771 CH63_2772 CH63_2772 CH63_2772 3065849 3066487 + semialdehyde dehydrogenase%2C NAD binding domain protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2772 CH63_2773 CH63_2773 phnP phnP 3066500 3067252 - phosphonate metabolism protein PhnP phnP: phosphonate metabolism protein PhnP~[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2773 CH63_2774 CH63_2774 phnN phnN 3067243 3067824 - phosphonate metabolism protein/1%2C5-bisphosphokinase (PRPP-forming) PhnN phosphon_PhnN: phosphonate metabolism protein/1%2C5-bisphosphokinase (PRPP-forming) PhnN~[P] COG3709 Uncharacterized component of phosphonate metabolism gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2774 CH63_2775 CH63_2775 phnM phnM 3067824 3068960 - phosphonate metabolism protein PhnM phosphono_phnM: phosphonate metabolism protein PhnM~[P] COG3454 Metal-dependent hydrolase involved in phosphonate metabolism gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2775 CH63_2776 CH63_2776 phnL phnL 3068957 3069676 - phosphonate C-P lyase system protein PhnL CP_lyasePhnL: phosphonate C-P lyase system protein PhnL~[P] COG4778 ABC-type phosphonate transport system%2C ATPase component gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2776 CH63_2777 CH63_2777 phnK phnK 3070065 3070856 - phosphonate C-P lyase system protein PhnK CP_lyasePhnK: phosphonate C-P lyase system protein PhnK~[P] COG4107 ABC-type phosphonate transport system%2C ATPase component gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2777 CH63_2778 CH63_2778 CH63_2778 3070856 3071737 - phosphonate metabolism PhnJ family protein [P] COG3627 Uncharacterized enzyme of phosphonate metabolism gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2778 CH63_2779 CH63_2779 CH63_2779 3071730 3072908 - bacterial phosphonate metabolism family protein [P] COG3626 Uncharacterized enzyme of phosphonate metabolism gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2779 CH63_278 CH63_278 CH63_278 283456 284817 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_278 CH63_2780 CH63_2780 phnH phnH 3072908 3073447 - phosphonate C-P lyase system protein PhnH phnH_redo: phosphonate C-P lyase system protein PhnH~[P] COG3625 Uncharacterized enzyme of phosphonate metabolism gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2780 CH63_2781 CH63_2781 CH63_2781 3073438 3073533 - putative phnH protein [P] COG3625 Uncharacterized enzyme of phosphonate metabolism gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2781 CH63_2782 CH63_2782 phnG phnG 3073533 3074009 - phosphonate C-P lyase system protein PhnG phnG_redo: phosphonate C-P lyase system protein PhnG~[P] COG3624 Uncharacterized enzyme of phosphonate metabolism gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2782 CH63_2783 CH63_2783 phnF phnF 3074010 3074735 - phosphonate metabolism transcriptional regulator PhnF C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF~[K] COG2188 Transcriptional regulators gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2783 CH63_2784 CH63_2784 CH63_2784 3074915 3075049 + hypothetical protein conserved hypothetical protein gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2784 CH63_2785 CH63_2785 CH63_2785 3075063 3075377 - 4Fe-4S single cluster domain protein [O] COG0602 Organic radical activating enzymes gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2785 CH63_2786 CH63_2786 nrdD nrdD 3075704 3077842 - anaerobic ribonucleoside-triphosphate reductase nrdD: anaerobic ribonucleoside-triphosphate reductase~[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2786 CH63_2787 CH63_2787 CH63_2787 3078276 3078992 - ABC transporter family protein [EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2787 CH63_2788 CH63_2788 CH63_2788 3078979 3079857 - ABC transporter family protein [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2788 CH63_2789 CH63_2789 CH63_2789 3079850 3080686 - binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2789 CH63_279 CH63_279 CH63_279 285057 286013 + putative sugar-binding domain protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_279 CH63_2790 CH63_2790 CH63_2790 3080705 3081754 - binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2790 CH63_2791 CH63_2791 CH63_2791 3081850 3083418 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2791 CH63_2792 CH63_2792 CH63_2792 3084057 3084515 + hypothetical protein conserved hypothetical protein~[G] COG2731 Beta-galactosidase%2C beta subunit gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2792 CH63_2793 CH63_2793 argF argF 3084822 3085829 - ornithine carbamoyltransferase orni_carb_tr: ornithine carbamoyltransferase~[E] COG0078 Ornithine carbamoyltransferase gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2793 CH63_2794 CH63_2794 rraB rraB 3086041 3086472 + regulator of ribonuclease activity B [S] COG3076 Uncharacterized protein conserved in bacteria gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2794 CH63_2795 CH63_2795 CH63_2795 3086682 3087185 - acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2795 CH63_2796 CH63_2796 valS valS 3087327 3090224 - valine--tRNA ligase valS: valine--tRNA ligase~[J] COG0525 Valyl-tRNA synthetase gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2796 CH63_2797 CH63_2797 CH63_2797 3090237 3090686 - DNA polymerase III chi subunit%2C HolC family protein [L] COG2927 DNA polymerase III%2C chi subunit gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2797 CH63_2798 CH63_2798 CH63_2798 3090837 3092348 - hypothetical protein cytosol aminopeptidase family%2C N-terminal domain protein~[E] COG0260 Leucyl aminopeptidase gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2798 CH63_2799 CH63_2799 lptF lptF 3092628 3093722 + LPS export ABC transporter permease LptF lptF_YjgP: LPS export ABC transporter permease LptF~[R] COG0795 Predicted permeases gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2799 CH63_28 CH63_28 CH63_28 26660 27316 + fumarylacetoacetate (FAA) hydrolase family protein [Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_28 CH63_280 CH63_280 CH63_280 286134 286739 - NADPH-dependent FMN reductase family protein [I] COG1182 Acyl carrier protein phosphodiesterase gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_280 CH63_2800 CH63_2800 lptG lptG 3093722 3094798 + LPS export ABC transporter permease LptG lptG_lptG: LPS export ABC transporter permease LptG~[R] COG0795 Predicted permeases gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2800 CH63_2801 CH63_2801 CH63_2801 3094903 3094987 + tRNA-Leu tRNA gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2801 CH63_2802 CH63_2802 CH63_2802 3095186 3096445 + phage integrase family protein [L] COG0582 Integrase gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2802 CH63_2803 CH63_2803 CH63_2803 3096635 3098509 + hypothetical protein conserved hypothetical protein~[S] COG1479 Uncharacterized conserved protein gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2803 CH63_2804 CH63_2804 CH63_2804 3098502 3099611 + histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2804 CH63_2805 CH63_2805 CH63_2805 3099662 3100441 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2805 CH63_2806 CH63_2806 CH63_2806 3100441 3101463 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2806 CH63_2807 CH63_2807 CH63_2807 3101574 3102032 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2807 CH63_2808 CH63_2808 CH63_2808 3102222 3102428 - hypothetical protein conserved hypothetical protein~[S] COG3024 Uncharacterized protein conserved in bacteria gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2808 CH63_2809 CH63_2809 CH63_2809 3102614 3103366 - hypothetical protein conserved hypothetical protein~[S] COG4582 Uncharacterized protein conserved in bacteria gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2809 CH63_281 CH63_281 hrpA hrpA 287162 291049 + RNA helicase HrpA DEAH_box_HrpA: RNA helicase HrpA~[L] COG1643 HrpA-like helicases gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_281 CH63_2810 CH63_2810 coaE coaE 3103363 3103983 - dephospho-CoA kinase [H] COG0237 Dephospho-CoA kinase gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2810 CH63_2811 CH63_2811 guaC guaC 3104279 3105322 + guanosine monophosphate reductase GMP_reduct_1: guanosine monophosphate reductase~[F] COG0516 IMP dehydrogenase/GMP reductase gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2811 CH63_2812 CH63_2812 CH63_2812 3105765 3106964 - type II secretion system (T2SS)%2C F family protein [NU] COG1459 Type II secretory pathway%2C component PulF gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2812 CH63_2813 CH63_2813 CH63_2813 3106961 3108499 - type II/IV secretion system family protein [NU] COG2804 Type II secretory pathway%2C ATPase PulE/Tfp pilus assembly pathway%2C ATPase PilB gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2813 CH63_2814 CH63_2814 CH63_2814 3108492 3108956 - hypothetical protein IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein~[NU] COG4969 Tfp pilus assembly protein%2C major pilin PilA gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2814 CH63_2815 CH63_2815 nadC nadC 3109159 3110067 - nicotinate-nucleotide diphosphorylase nadC: nicotinate-nucleotide diphosphorylase~[H] COG0157 Nicotinate-nucleotide pyrophosphorylase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2815 CH63_2816 CH63_2816 CH63_2816 3110180 3110731 + N-acetylmuramoyl-L-alanine amidase family protein [V] COG3023 Negative regulator of beta-lactamase expression gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2816 CH63_2817 CH63_2817 CH63_2817 3111021 3111287 + putative membrane-bound sensory transducer inbeta-lactamase regulation [V] COG3725 Membrane protein required for beta-lactamase induction gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2817 CH63_2818 CH63_2818 CH63_2818 3111304 3111876 + putative signaling modulator of AmpE [V] COG3725 Membrane protein required for beta-lactamase induction gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2818 CH63_2819 CH63_2819 CH63_2819 3112309 3113706 - amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2819 CH63_282 CH63_282 CH63_282 291388 291717 + hypothetical protein conserved hypothetical protein~[S] COG4679 Phage-related protein gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_282 CH63_2820 CH63_2820 CH63_2820 3114569 3115333 + bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2820 CH63_2821 CH63_2821 aceE aceE 3115529 3118192 + pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type aceE: pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type~[C] COG2609 Pyruvate dehydrogenase complex%2C dehydrogenase (E1) component gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2821 CH63_2822 CH63_2822 aceF aceF 3118206 3119735 + dihydrolipoyllysine-residue acetyltransferase PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase~[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase (E2) component%2C and related enzymes gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2822 CH63_2823 CH63_2823 lpdA lpdA 3120041 3121465 + dihydrolipoyl dehydrogenase lipoamide_DH: dihydrolipoyl dehydrogenase~[C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2823 CH63_2824 CH63_2824 CH63_2824 3121708 3122166 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2824 CH63_2825 CH63_2825 acnB acnB 3122736 3125333 + aconitate hydratase 2 acnB: aconitate hydratase 2~[C] COG1049 Aconitase B gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2825 CH63_2826 CH63_2826 CH63_2826 3125632 3125991 + hypothetical protein conserved hypothetical protein~[S] COG3112 Uncharacterized protein conserved in bacteria gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2826 CH63_2827 CH63_2827 CH63_2827 3126443 3127009 - putative membrane protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2827 CH63_2828 CH63_2828 speD speD 3127447 3128241 - S-adenosylmethionine decarboxylase proenzyme SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme~[E] COG1586 S-adenosylmethionine decarboxylase gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2828 CH63_2829 CH63_2829 speE speE 3128319 3129209 - spermidine synthase speE: spermidine synthase~[E] COG0421 Spermidine synthase gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2829 CH63_283 CH63_283 CH63_283 291714 292037 + helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_283 CH63_2830 CH63_2830 CH63_2830 3129326 3129673 - bacterial chaperone lipo family protein gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2830 CH63_2831 CH63_2831 CH63_2831 3129990 3131591 + multicopper oxidase family protein [Q] COG2132 Putative multicopper oxidases gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2831 CH63_2832 CH63_2832 hpt hpt 3131811 3132347 + hypoxanthine phosphoribosyltransferase HGPRTase: hypoxanthine phosphoribosyltransferase~[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2832 CH63_2833 CH63_2833 can can 3132501 3133163 - carbonic anhydrase 2 [P] COG0288 Carbonic anhydrase gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2833 CH63_2834 CH63_2834 CH63_2834 3133399 3134325 + ABC transporter family protein [V] COG1131 ABC-type multidrug transport system%2C ATPase component gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2834 CH63_2835 CH63_2835 CH63_2835 3134322 3135092 + ABC-2 type transporter family protein [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2835 CH63_2836 CH63_2836 CH63_2836 3135299 3135637 + hypothetical protein conserved hypothetical protein~[G] COG0726 Predicted xylanase/chitin deacetylase gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2836 CH63_2837 CH63_2837 CH63_2837 3135618 3136613 + polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2837 CH63_2838 CH63_2838 panD panD 3136762 3137142 - aspartate 1-decarboxylase panD: aspartate 1-decarboxylase~[H] COG0853 Aspartate 1-decarboxylase gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2838 CH63_2839 CH63_2839 panC panC 3137553 3138407 - pantoate--beta-alanine ligase panC: pantoate--beta-alanine ligase~[H] COG0414 Panthothenate synthetase gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2839 CH63_284 CH63_284 CH63_284 292093 292929 - trypsin family protein [E] COG3591 V8-like Glu-specific endopeptidase gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_284 CH63_2840 CH63_2840 panB panB 3138495 3139292 - 3-methyl-2-oxobutanoate hydroxymethyltransferase panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase~[H] COG0413 Ketopantoate hydroxymethyltransferase gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2840 CH63_2841 CH63_2841 folK folK 3139561 3140040 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase~[H] COG0801 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2841 CH63_2842 CH63_2842 pcnB pcnB 3140048 3141370 - poly(A) polymerase family protein pcnB: poly(A) polymerase family protein~[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2842 CH63_2843 CH63_2843 gluQ gluQ 3141662 3142765 - glutamyl-queuosine tRNA(Asp) synthetase queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2843 CH63_2844 CH63_2844 dksA dksA 3142856 3143311 - RNA polymerase-binding protein DksA dksA: RNA polymerase-binding protein DksA~[T] COG1734 DnaK suppressor protein gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2844 CH63_2845 CH63_2845 sfsA sfsA 3143481 3144218 - sugar fermentation stimulation protein sfsA: sugar fermentation stimulation protein~[R] COG1489 DNA-binding protein%2C stimulates sugar fermentation gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2845 CH63_2846 CH63_2846 CH63_2846 3144331 3144906 - 2'-5' RNA ligase 2_5_ligase: 2'-5' RNA ligase~[J] COG1514 2'-5' RNA ligase gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2846 CH63_2847 CH63_2847 hrpB hrpB 3145019 3147508 + ATP-dependent helicase HrpB DEAH_box_HrpB: ATP-dependent helicase HrpB~[L] COG1643 HrpA-like helicases gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2847 CH63_2848 CH63_2848 mrcB mrcB 3147617 3150091 + penicillin-binding protein 1B PBP_1b: penicillin-binding protein 1B~[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein) gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2848 CH63_2849 CH63_2849 CH63_2849 3150413 3151207 + ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2849 CH63_285 CH63_285 CH63_285 293263 293577 - putative acid shock protein 1 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_285 CH63_2850 CH63_2850 CH63_2850 3151207 3152295 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2850 CH63_2851 CH63_2851 fhuB fhuB 3152292 3154289 + iron(3+)-hydroxamate import system permease protein fhuB [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2851 CH63_2852 CH63_2852 hemL hemL 3154663 3155943 - glutamate-1-semialdehyde-2%2C1-aminomutase hemL: glutamate-1-semialdehyde-2%2C1-aminomutase~[H] COG0001 Glutamate-1-semialdehyde aminotransferase gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2852 CH63_2853 CH63_2853 clcA clcA 3156324 3157760 + H(+)/Cl(-) exchange transporter ClcA [P] COG0038 Chloride channel protein EriC gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2853 CH63_2854 CH63_2854 erpA erpA 3157896 3158240 + iron-sulfur cluster insertion protein erpA [S] COG0316 Uncharacterized conserved protein gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2854 CH63_2855 CH63_2855 CH63_2855 3158542 3159156 - hypothetical protein conserved hypothetical protein~[S] COG2860 Predicted membrane protein gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2855 CH63_2856 CH63_2856 CH63_2856 3159195 3159953 - periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2856 CH63_2857 CH63_2857 mtnN mtnN 3159998 3160699 - MTA/SAH nucleosidase MTA/SAH-Nsdase: MTA/SAH nucleosidase~[F] COG0775 Nucleoside phosphorylase gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2857 CH63_2858 CH63_2858 dgt dgt 3160993 3162513 + dGTPase family protein dGTP_triPase: dGTPase family protein~[F] COG0232 dGTP triphosphohydrolase gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2858 CH63_2859 CH63_2859 CH63_2859 3162711 3164156 + peptidase Do family protein degP_htrA_DO: peptidase Do family protein~[O] COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2859 CH63_286 CH63_286 CH63_286 294181 294654 + prokaryotic cytochrome b561 family protein [C] COG3038 Cytochrome B561 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_286 CH63_2860 CH63_2860 CH63_2860 3164331 3167123 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2860 CH63_2861 CH63_2861 CH63_2861 3167567 3169801 + RelA/SpoT family protein spoT_relA: RelA/SpoT family protein~[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2861 CH63_2862 CH63_2862 CH63_2862 3170003 3170845 + MazG family protein mazG: MazG family protein~[R] COG1694 Predicted pyrophosphatase gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2862 CH63_2863 CH63_2863 pyrG pyrG 3171057 3172694 + CTP synthase pyrG: CTP synthase~[F] COG0504 CTP synthase (UTP-ammonia lyase) gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2863 CH63_2864 CH63_2864 eno eno 3172775 3174070 + phosphopyruvate hydratase eno: phosphopyruvate hydratase~[G] COG0148 Enolase gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2864 CH63_2865 CH63_2865 sodC sodC 3174442 3175047 + superoxide dismutase Cu-Zn [P] COG2032 Cu/Zn superoxide dismutase gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2865 CH63_2866 CH63_2866 CH63_2866 3175151 3175822 + putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE~[O] COG0602 Organic radical activating enzymes gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2866 CH63_2867 CH63_2867 queD queD 3176056 3176415 - queuosine biosynthesis protein QueD queuosine_QueD: queuosine biosynthesis protein QueD~[H] COG0720 6-pyruvoyl-tetrahydropterin synthase gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2867 CH63_2868 CH63_2868 CH63_2868 3176808 3178646 + sulfite reductase [NADPH] flavoprotein%2C alpha-component cysJ: sulfite reductase [NADPH] flavoprotein%2C alpha-component~[P] COG0369 Sulfite reductase%2C alpha subunit (flavoprotein) gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2868 CH63_2869 CH63_2869 cysI cysI 3178646 3180376 + sulfite reductase (NADPH) hemoprotein%2C beta-component cysI: sulfite reductase (NADPH) hemoprotein%2C beta-component~[P] COG0155 Sulfite reductase%2C beta subunit (hemoprotein) gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2869 CH63_287 CH63_287 CH63_287 295164 295454 - hypothetical protein conserved hypothetical protein gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_287 CH63_2870 CH63_2870 CH63_2870 3180373 3180840 + phosphoadenosine phosphosulfate reductase family protein [EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2870 CH63_2871 CH63_2871 CH63_2871 3180815 3181099 + phosphoadenosine phosphosulfate reductase family protein [EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2871 CH63_2872 CH63_2872 CH63_2872 3181342 3181749 - hypothetical protein conserved hypothetical protein~[S] COG1598 Uncharacterized conserved protein gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2872 CH63_2873 CH63_2873 CH63_2873 3181924 3182124 - ycfA-like family protein [N] COG1724 Predicted periplasmic or secreted lipoprotein gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2873 CH63_2874 CH63_2874 CH63_2874 3182148 3182414 + hypothetical protein gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2874 CH63_2875 CH63_2875 cobA cobA 3182716 3184134 + uroporphyrinogen-III C-methyltransferase cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase~[H] COG0007 Uroporphyrinogen-III methylase gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2875 CH63_2876 CH63_2876 cysD cysD 3184145 3185053 + sulfate adenylyltransferase%2C small subunit cysD: sulfate adenylyltransferase%2C small subunit~[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2876 CH63_2877 CH63_2877 cysN cysN 3185065 3186582 + sulfate adenylyltransferase%2C large subunit cysN: sulfate adenylyltransferase%2C large subunit~[P] COG2895 GTPases - Sulfate adenylate transferase subunit 1 gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2877 CH63_2878 CH63_2878 cysC cysC 3186521 3187225 + adenylyl-sulfate kinase apsK: adenylyl-sulfate kinase~[P] COG0529 Adenylylsulfate kinase and related kinases gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2878 CH63_2879 CH63_2879 CH63_2879 3187416 3187733 + hypothetical protein conserved hypothetical protein gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2879 CH63_288 CH63_288 CH63_288 295523 298147 - RHS repeat-associated core domain protein rhs_assc_core: RHS repeat-associated core domain protein~[M] COG3209 Rhs family protein gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_288 CH63_2880 CH63_2880 CH63_2880 3188046 3188366 + septum formation initiator family protein [D] COG2919 Septum formation initiator gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2880 CH63_2881 CH63_2881 ispD ispD 3188370 3189095 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~[I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2881 CH63_2882 CH63_2882 ispF ispF 3189234 3189722 + 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase [I] COG0245 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2882 CH63_2883 CH63_2883 CH63_2883 3189733 3190782 + tRNA pseudouridine synthase%2C TruD family protein tRNA_TruD_broad: tRNA pseudouridine synthase%2C TruD family protein~[S] COG0585 Uncharacterized conserved protein gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2883 CH63_2884 CH63_2884 surE surE 3190760 3191524 + 5'/3'-nucleotidase SurE surE: 5'/3'-nucleotidase SurE~[R] COG0496 Predicted acid phosphatase gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2884 CH63_2885 CH63_2885 pcm pcm 3191518 3192144 + protein-L-isoaspartate O-methyltransferase pimt: protein-L-isoaspartate O-methyltransferase~[O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2885 CH63_2886 CH63_2886 CH63_2886 3192266 3193249 + lysM domain protein [M] COG0739 Membrane proteins related to metalloendopeptidases gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2886 CH63_2887 CH63_2887 rpoS rpoS 3193304 3194302 + RNA polymerase sigma factor RpoS rpoS_proteo: RNA polymerase sigma factor RpoS~[K] COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32) gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2887 CH63_2888 CH63_2888 mutS mutS 3194670 3197225 - DNA mismatch repair protein MutS mutS1: DNA mismatch repair protein MutS~[L] COG0249 Mismatch repair ATPase (MutS family) gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2888 CH63_2889 CH63_2889 rpiB rpiB 3198019 3198474 - ribose 5-phosphate isomerase B rpiB: ribose 5-phosphate isomerase B~[G] COG0698 Ribose 5-phosphate isomerase RpiB gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2889 CH63_289 CH63_289 CH63_289 299117 299575 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_289 CH63_2890 CH63_2890 CH63_2890 3198957 3200072 + zinc-binding dehydrogenase family protein [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2890 CH63_2891 CH63_2891 CH63_2891 3200136 3200906 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2891 CH63_2892 CH63_2892 CH63_2892 3200993 3201994 + dak1 domain protein [G] COG2376 Dihydroxyacetone kinase gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2892 CH63_2893 CH63_2893 dhaL dhaL 3202001 3202675 + dihydroxyacetone kinase%2C L subunit dha_L_ycgS: dihydroxyacetone kinase%2C L subunit~[G] COG2376 Dihydroxyacetone kinase gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2893 CH63_2894 CH63_2894 CH63_2894 3202796 3203767 - sigma-70%2C region 4 family protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2894 CH63_2895 CH63_2895 arsB arsB 3204322 3205611 - arsenite/antimonite efflux pump membrane family protein 2a45: arsenite/antimonite efflux pump membrane family protein~[P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2895 CH63_2896 CH63_2896 CH63_2896 3205696 3206037 - bacterial regulatory%2C arsR family protein [K] COG0640 Predicted transcriptional regulators gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2896 CH63_2897 CH63_2897 CH63_2897 3206284 3206547 - faeA-like family protein gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2897 CH63_2898 CH63_2898 CH63_2898 3206758 3206961 - hypothetical protein conserved hypothetical protein gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2898 CH63_2899 CH63_2899 CH63_2899 3207385 3208149 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2899 CH63_29 CH63_29 CH63_29 27419 27865 + putative zinc-/iron-chelating domain protein [S] COG2983 Uncharacterized conserved protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_29 CH63_290 CH63_290 CH63_290 299697 301196 - carboxypeptidase Taq (M32) metallopeptidase family protein [E] COG2317 Zn-dependent carboxypeptidase gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_290 CH63_2900 CH63_2900 CH63_2900 3208220 3209599 - cytochrome c family protein [P] COG1858 Cytochrome c peroxidase gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2900 CH63_2901 CH63_2901 CH63_2901 3209849 3210088 - hypothetical protein conserved hypothetical protein gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2901 CH63_2902 CH63_2902 CH63_2902 3210261 3212357 + tonB dependent receptor family protein [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2902 CH63_2903 CH63_2903 CH63_2903 3212790 3213977 + hypothetical protein shET2 enterotoxin%2C N-terminal region family protein~[R] COG0666 FOG: Ankyrin repeat gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2903 CH63_2904 CH63_2904 map map 3214335 3215120 - methionine aminopeptidase%2C type I met_pdase_I: methionine aminopeptidase%2C type I~[J] COG0024 Methionine aminopeptidase gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2904 CH63_2905 CH63_2905 CH63_2905 3215117 3215368 - hypothetical protein conserved hypothetical protein gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2905 CH63_2906 CH63_2906 CH63_2906 3215551 3217194 - hydrolyase%2C tartrate alpha subunit/fumarate%2C Fe-S type domain protein ttdA_fumA_fumB: hydrolyase%2C tartrate alpha subunit/fumarate%2C Fe-S type domain protein~[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I%2C N-terminal domain gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2906 CH63_2907 CH63_2907 CH63_2907 3217592 3219088 - hypothetical protein FGGY family of carbohydrate kinase%2C N-terminal domain protein~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2907 CH63_2908 CH63_2908 CH63_2908 3219099 3219980 - xylose isomerase-like TIM barrel family protein [G] COG3623 Putative L-xylulose-5-phosphate 3-epimerase gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2908 CH63_2909 CH63_2909 CH63_2909 3220186 3221223 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2909 CH63_291 CH63_291 CH63_291 301290 302546 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_291 CH63_2910 CH63_2910 CH63_2910 3221236 3222225 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2910 CH63_2911 CH63_2911 CH63_2911 3222218 3223732 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2911 CH63_2912 CH63_2912 CH63_2912 3223883 3224341 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2912 CH63_2913 CH63_2913 CH63_2913 3224592 3225596 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2913 CH63_2914 CH63_2914 CH63_2914 3225757 3226566 - deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2914 CH63_2915 CH63_2915 araD araD 3227269 3227964 + L-ribulose-5-phosphate 4-epimerase araD: L-ribulose-5-phosphate 4-epimerase~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2915 CH63_2916 CH63_2916 dmsA dmsA 3228427 3230877 + anaerobic dimethyl sulfoxide reductase chain A [C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2916 CH63_2917 CH63_2917 dmsB dmsB 3230889 3231506 + dimethylsulfoxide reductase%2C chain B DMSO_dmsB: dimethylsulfoxide reductase%2C chain B~[C] COG0437 Fe-S-cluster-containing hydrogenase components 1 gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2917 CH63_2918 CH63_2918 CH63_2918 3231508 3232368 + DMSO reductase anchor subunit family protein [R] COG3302 DMSO reductase anchor subunit gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2918 CH63_2919 CH63_2919 CH63_2919 3232514 3233224 + nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2919 CH63_292 CH63_292 CH63_292 302595 303341 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_292 CH63_2920 CH63_2920 CH63_2920 3233481 3234011 - prokaryotic cytochrome b561 family protein [C] COG3038 Cytochrome B561 gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2920 CH63_2921 CH63_2921 cybC cybC 3234159 3234542 - soluble cytochrome b562 [C] COG3783 Soluble cytochrome b562 gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2921 CH63_2922 CH63_2922 katG katG 3234619 3236832 - catalase/peroxidase HPI cat_per_HPI: catalase/peroxidase HPI~[P] COG0376 Catalase (peroxidase I) gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2922 CH63_2923 CH63_2923 CH63_2923 3237368 3238309 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2923 CH63_2924 CH63_2924 CH63_2924 3238402 3239019 + hypothetical protein conserved hypothetical protein~[R] COG5618 Predicted periplasmic lipoprotein gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2924 CH63_2925 CH63_2925 ccmA ccmA 3239019 3240542 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2925 CH63_2926 CH63_2926 CH63_2926 3240542 3241684 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2926 CH63_2927 CH63_2927 CH63_2927 3241935 3242765 + hypothetical protein thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein~[G] COG3959 Transketolase%2C N-terminal subunit gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2927 CH63_2928 CH63_2928 CH63_2928 3242758 3243702 + hypothetical protein transketolase%2C C-terminal domain protein~[G] COG3958 Transketolase%2C C-terminal subunit gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2928 CH63_2929 CH63_2929 CH63_2929 3243705 3245192 + hypothetical protein FGGY family of carbohydrate kinase%2C N-terminal domain protein~[C] COG0554 Glycerol kinase gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2929 CH63_293 CH63_293 CH63_293 303638 304054 + hypothetical protein conserved hypothetical protein gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_293 CH63_2930 CH63_2930 CH63_2930 3245213 3246637 + hypothetical protein L-fucose isomerase%2C C-terminal domain protein~[G] COG2407 L-fucose isomerase and related proteins gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2930 CH63_2931 CH63_2931 CH63_2931 3246859 3247803 - transcriptional regulator%2C putative [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2931 CH63_2932 CH63_2932 CH63_2932 3248051 3249391 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2932 CH63_2933 CH63_2933 ygaD ygaD 3249708 3250196 + protein YgaD [R] COG1546 Uncharacterized protein (competence- and mitomycin-induced) gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2933 CH63_2934 CH63_2934 recA recA 3250310 3251380 + protein RecA tigrfam_recA: protein RecA~[L] COG0468 RecA/RadA recombinase gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2934 CH63_2935 CH63_2935 CH63_2935 3251518 3252081 + recX family protein [R] COG2137 Uncharacterized protein conserved in bacteria gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2935 CH63_2936 CH63_2936 alaS alaS 3252221 3254848 + alanine--tRNA ligase alaS: alanine--tRNA ligase~[J] COG0013 Alanyl-tRNA synthetase gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2936 CH63_2937 CH63_2937 csrA csrA 3255098 3255283 + carbon storage regulator csrA: carbon storage regulator~[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2937 CH63_2938 CH63_2938 CH63_2938 3255646 3255738 + tRNA-Ser tRNA gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2938 CH63_2939 CH63_2939 CH63_2939 3255747 3255823 + tRNA-Arg tRNA gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2939 CH63_294 CH63_294 CH63_294 304078 305469 - putative arginine/ornithine antiporter [E] COG0531 Amino acid transporters gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_294 CH63_2940 CH63_2940 CH63_2940 3255881 3255957 + tRNA-Arg tRNA gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2940 CH63_2941 CH63_2941 CH63_2941 3256037 3256113 + tRNA-Arg tRNA gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2941 CH63_2942 CH63_2942 CH63_2942 3256708 3257274 + HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2942 CH63_2943 CH63_2943 CH63_2943 3257271 3257699 + hypothetical protein conserved hypothetical protein~[S] COG1238 Predicted membrane protein gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2943 CH63_2944 CH63_2944 gshA gshA 3257782 3259341 + glutamate--cysteine ligase glu_cys_ligase: glutamate--cysteine ligase~[H] COG2918 Gamma-glutamylcysteine synthetase gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2944 CH63_2945 CH63_2945 luxS luxS 3259508 3260023 + S-ribosylhomocysteine lyase [T] COG1854 LuxS protein involved in autoinducer AI2 synthesis gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2945 CH63_2946 CH63_2946 CH63_2946 3260227 3260685 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2946 CH63_2947 CH63_2947 CH63_2947 3260823 3262103 - CBS domain protein [P] COG4536 Putative Mg2+ and Co2+ transporter CorB gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2947 CH63_2948 CH63_2948 ypjD ypjD 3262175 3262966 - inner membrane protein ypjD [R] COG4137 ABC-type uncharacterized transport system%2C permease component gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2948 CH63_2949 CH63_2949 ffh ffh 3263132 3264493 + signal recognition particle protein ffh: signal recognition particle protein~[U] COG0541 Signal recognition particle GTPase gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2949 CH63_295 CH63_295 ydgH ydgH 305739 306692 - protein ydgH gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_295 CH63_2950 CH63_2950 rpsP rpsP 3264721 3264969 + ribosomal protein S16 S16: ribosomal protein S16~[J] COG0228 Ribosomal protein S16 gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2950 CH63_2951 CH63_2951 rimM rimM 3264991 3265539 + 16S rRNA processing protein RimM 16S_RimM: 16S rRNA processing protein RimM~[J] COG0806 RimM protein%2C required for 16S rRNA processing gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2951 CH63_2952 CH63_2952 trmD trmD 3265578 3266318 + tRNA (guanine(37)-N(1))-methyltransferase trmD: tRNA (guanine(37)-N(1))-methyltransferase~[J] COG0336 tRNA-(guanine-N1)-methyltransferase gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2952 CH63_2953 CH63_2953 rplS rplS 3266399 3266746 + ribosomal protein L19 rplS_bact: ribosomal protein L19~[J] COG0335 Ribosomal protein L19 gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2953 CH63_2954 CH63_2954 CH63_2954 3266958 3267416 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2954 CH63_2955 CH63_2955 CH63_2955 3267719 3268486 - hypothetical protein conserved hypothetical protein~[M] COG3137 Putative salt-induced outer membrane protein gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2955 CH63_2956 CH63_2956 CH63_2956 3268809 3269105 - anaerobic c4-dicarboxylate membrane transporter family protein [R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2956 CH63_2957 CH63_2957 CH63_2957 3269093 3269404 - anaerobic c4-dicarboxylate membrane transporter family protein [R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2957 CH63_2958 CH63_2958 CH63_2958 3269473 3270153 - anaerobic c4-dicarboxylate membrane transporter family protein [R] COG2704 Anaerobic C4-dicarboxylate transporter gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2958 CH63_2959 CH63_2959 CH63_2959 3270582 3271298 - response regulator [KT] COG3279 Response regulator of the LytR/AlgR family gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2959 CH63_296 CH63_296 pntA pntA 307222 308748 + NAD(P)(+) transhydrogenase (AB-specific)%2C alpha subunit pntA: NAD(P)(+) transhydrogenase (AB-specific)%2C alpha subunit~[C] COG3288 NAD/NADP transhydrogenase alpha subunit gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_296 CH63_2960 CH63_2960 CH63_2960 3271531 3272601 + 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2960 CH63_2961 CH63_2961 tyrA tyrA 3272614 3273735 + chorismate mutase CM_T: chorismate mutase~[E] COG0287 Prephenate dehydrogenase gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2961 CH63_2962 CH63_2962 CH63_2962 3273840 3274295 - prephenate dehydratase family protein [E] COG0077 Prephenate dehydratase gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2962 CH63_2963 CH63_2963 CH63_2963 3274311 3275090 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2963 CH63_2964 CH63_2964 CH63_2964 3275090 3275743 - integrase core domain protein [L] COG4584 Transposase and inactivated derivatives gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2964 CH63_2965 CH63_2965 CH63_2965 3275733 3276113 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2965 CH63_2966 CH63_2966 CH63_2966 3276127 3276957 - chorismate mutase CM_P_1: chorismate mutase~[E] COG0077 Prephenate dehydratase gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2966 CH63_2967 CH63_2967 CH63_2967 3277240 3277698 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2967 CH63_2968 CH63_2968 raiA raiA 3278029 3278391 - ribosome-associated inhibitor A [J] COG1544 Ribosome-associated protein Y (PSrp-1) gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2968 CH63_2969 CH63_2969 CH63_2969 3278746 3279477 - hypothetical protein conserved hypothetical protein~[R] COG4105 DNA uptake lipoprotein gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2969 CH63_297 CH63_297 pntB pntB 308821 310215 + NAD(P) transhydrogenase subunit beta [C] COG1282 NAD/NADP transhydrogenase beta subunit gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_297 CH63_2970 CH63_2970 CH63_2970 3279613 3280590 + pseudouridine synthase%2C RluA family protein rluA_subfam: pseudouridine synthase%2C RluA family protein~[J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2970 CH63_2971 CH63_2971 CH63_2971 3280592 3281323 + multi-copper polyphenol oxidoreductase laccase family protein [S] COG1496 Uncharacterized conserved protein gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2971 CH63_2972 CH63_2972 clpB clpB 3281453 3284026 + ATP-dependent chaperone protein ClpB chaperone_ClpB: ATP-dependent chaperone protein ClpB~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2972 CH63_2973 CH63_2973 CH63_2973 3284550 3286080 + 16S ribosomal RNA rRNA gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2973 CH63_2974 CH63_2974 CH63_2974 3286188 3286264 + tRNA-Ile tRNA gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2974 CH63_2975 CH63_2975 CH63_2975 3286316 3286391 + tRNA-Ala tRNA gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2975 CH63_2976 CH63_2976 CH63_2976 3286612 3289516 + 23S ribosomal RNA rRNA gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2976 CH63_2978 CH63_2978 CH63_2978 3289628 3289742 + 5S ribosomal RNA rRNA gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2978 CH63_2979 CH63_2979 CH63_2979 3290129 3290470 - hypothetical protein conserved hypothetical protein~[R] COG5544 Predicted periplasmic lipoprotein gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2979 CH63_298 CH63_298 CH63_298 310490 311446 - universal stress family protein [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_298 CH63_2980 CH63_2980 CH63_2980 3290532 3291887 - phospholipase D family protein [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2980 CH63_2981 CH63_2981 CH63_2981 3292063 3294705 - acetyltransferase family protein [C] COG1042 Acyl-CoA synthetase (NDP forming) gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2981 CH63_2982 CH63_2982 CH63_2982 3294748 3295497 - DTW domain protein [S] COG3148 Uncharacterized conserved protein gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2982 CH63_2983 CH63_2983 trxA trxA 3295667 3296104 - thioredoxin thioredoxin: thioredoxin~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2983 CH63_2984 CH63_2984 CH63_2984 3296356 3297522 + RNA 2'-O ribose methyltransferase substrate binding family protein [J] COG0566 rRNA methylases gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2984 CH63_2985 CH63_2985 CH63_2985 3297645 3299180 - drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein efflux_EmrB: drug resistance MFS transporter%2C drug:H+ antiporter-2 family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2985 CH63_2986 CH63_2986 CH63_2986 3299219 3300391 - efflux pump membrane family protein 8a0101: efflux pump membrane family protein~[V] COG1566 Multidrug resistance efflux pump gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2986 CH63_2987 CH63_2987 CH63_2987 3300775 3301287 - winged helix DNA-binding domain protein [K] COG1846 Transcriptional regulators gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2987 CH63_2988 CH63_2988 CH63_2988 3301459 3301800 - branched-chain amino acid transport family protein gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2988 CH63_2989 CH63_2989 ygaZ ygaZ 3301797 3302570 - inner membrane protein YgaZ [E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2989 CH63_299 CH63_299 fnr fnr 311581 312333 - fumarate and nitrate reduction regulatory protein [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_299 CH63_2990 CH63_2990 CH63_2990 3302730 3303929 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2990 CH63_2991 CH63_2991 CH63_2991 3304142 3304528 - hypothetical protein conserved hypothetical protein gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2991 CH63_2992 CH63_2992 CH63_2992 3304638 3306035 - amidohydrolase%2C AtzE family protein amido_AtzE: amidohydrolase%2C AtzE family protein~[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2992 CH63_2993 CH63_2993 CH63_2993 3306032 3306235 - hypothetical protein conserved hypothetical protein gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2993 CH63_2994 CH63_2994 CH63_2994 3306545 3307378 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2994 CH63_2995 CH63_2995 CH63_2995 3307706 3308494 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2995 CH63_2996 CH63_2996 CH63_2996 3308507 3309175 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2996 CH63_2997 CH63_2997 CH63_2997 3309172 3309825 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2997 CH63_2998 CH63_2998 CH63_2998 3309806 3310552 + ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2998 CH63_2999 CH63_2999 CH63_2999 3310584 3311927 + aminotransferase class-V family protein [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_2999 CH63_3 CH63_3 ruvB ruvB 1326 2330 + Holliday junction DNA helicase RuvB ruvB: Holliday junction DNA helicase RuvB~[L] COG2255 Holliday junction resolvasome%2C helicase subunit gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3 CH63_30 CH63_30 CH63_30 27892 29142 - phage integrase family protein [L] COG0582 Integrase gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_30 CH63_300 CH63_300 CH63_300 312406 312924 - methylated-DNA--[]-cysteine S-methyltransferase family protein ogt: methylated-DNA--[]-cysteine S-methyltransferase family protein~[L] COG0350 Methylated DNA-protein cysteine methyltransferase gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_300 CH63_3000 CH63_3000 CH63_3000 3311927 3313219 + amidase%2C hydantoinase/carbamoylase family protein hydantase: amidase%2C hydantoinase/carbamoylase family protein~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3000 CH63_3001 CH63_3001 CH63_3001 3314308 3316097 + POTRA domain%2C ShlB-type family protein%3Bputative surface-exposed protein pseudogene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3001 CH63_3003 CH63_3003 CH63_3003 3316138 3317268 + hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3003 CH63_3004 CH63_3004 CH63_3004 3317297 3321871 + putative adhesin [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3004 CH63_3005 CH63_3005 CH63_3005 3322026 3323879 + glycosyl transferase 41 family protein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3005 CH63_3006 CH63_3006 CH63_3006 3323881 3324627 + adhesin biosynthesis transcription regulatory family protein gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3006 CH63_3007 CH63_3007 CH63_3007 3324799 3327246 - hypothetical protein acyl-CoA dehydrogenase%2C C-terminal domain protein~[I] COG1960 Acyl-CoA dehydrogenases gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3007 CH63_3008 CH63_3008 gmhA gmhA 3327486 3328067 + phosphoheptose isomerase gmhA: phosphoheptose isomerase~[G] COG0279 Phosphoheptose isomerase gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3008 CH63_3009 CH63_3009 CH63_3009 3329008 3329670 - L%2CD-transpeptidase catalytic domain protein [S] COG3034 Uncharacterized protein conserved in bacteria gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3009 CH63_301 CH63_301 CH63_301 313165 314610 + alkaline phosphatase family protein [P] COG1785 Alkaline phosphatase gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_301 CH63_3010 CH63_3010 CH63_3010 3328270 3329043 + glutamine amidotransferases class-II family protein [R] COG0121 Predicted glutamine amidotransferase gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3010 CH63_3011 CH63_3011 nqrA nqrA 3330276 3331619 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit~nqrA: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit~[C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrA gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3011 CH63_3012 CH63_3012 nqrB nqrB 3331623 3332864 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit~nqrB: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C B subunit~[C] COG1805 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrB gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3012 CH63_3013 CH63_3013 nqrC nqrC 3332854 3333654 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit~nqrC: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit~[C] COG2869 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrC gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3013 CH63_3014 CH63_3014 nqrD nqrD 3333647 3334276 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit~nqrD: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C D subunit~[C] COG1347 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrD gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3014 CH63_3015 CH63_3015 nqrE nqrE 3334283 3334879 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~nqrE: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C E subunit~[C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrE gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3015 CH63_3016 CH63_3016 nqrF nqrF 3334895 3336118 + ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit~nqrF: NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C F subunit~[C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase%2C subunit NqrF gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3016 CH63_3017 CH63_3017 CH63_3017 3336159 3337181 + apbE family protein [H] COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3017 CH63_3018 CH63_3018 CH63_3018 3337194 3337421 + hypothetical protein conserved hypothetical protein~[S] COG2991 Uncharacterized protein conserved in bacteria gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3018 CH63_3019 CH63_3019 CH63_3019 3337665 3338597 - glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3019 CH63_302 CH63_302 CH63_302 315156 317552 + terB-N family protein gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_302 CH63_3020 CH63_3020 dinB dinB 3338968 3340026 + DNA polymerase IV [L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3020 CH63_3021 CH63_3021 pepD pepD 3340140 3341600 - Xaa-His dipeptidase family protein aa-his-dipept: Xaa-His dipeptidase family protein~[E] COG2195 Di- and tripeptidases gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3021 CH63_3022 CH63_3022 CH63_3022 3343601 3344386 + lysR substrate binding domain protein [K] COG0583 Transcriptional regulator gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3022 CH63_3023 CH63_3023 CH63_3023 3344912 3345370 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3023 CH63_3024 CH63_3024 CH63_3024 3345556 3347160 - chitin binding domain protein [S] COG3397 Uncharacterized protein conserved in bacteria gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3024 CH63_3025 CH63_3025 CH63_3025 3347357 3347662 - putative membrane protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3025 CH63_3026 CH63_3026 gpt gpt 3348089 3348547 + xanthine phosphoribosyltransferase [F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3026 CH63_3027 CH63_3027 CH63_3027 3348674 3349921 + alpha/beta hydrolase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3027 CH63_3028 CH63_3028 crl crl 3349981 3350382 + sigma factor-binding protein crl gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3028 CH63_3029 CH63_3029 proB proB 3350559 3351662 + glutamate 5-kinase proB: glutamate 5-kinase~[E] COG0263 Glutamate 5-kinase gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3029 CH63_303 CH63_303 CH63_303 317683 318357 + noncanonical pyrimidine nucleotidase%2C YjjG family yjjG/YfnB: noncanonical pyrimidine nucleotidase%2C YjjG family~[R] COG1011 Predicted hydrolase (HAD superfamily) gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_303 CH63_3030 CH63_3030 proA proA 3351672 3352931 + glutamate-5-semialdehyde dehydrogenase proA: glutamate-5-semialdehyde dehydrogenase~[E] COG0014 Gamma-glutamyl phosphate reductase gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3030 CH63_3031 CH63_3031 CH63_3031 3353194 3353652 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3031 CH63_3032 CH63_3032 ycgR ycgR 3353978 3354727 + flagellar brake protein YcgR [M] COG5581 Predicted glycosyltransferase gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3032 CH63_3033 CH63_3033 CH63_3033 3354925 3355179 + putative membrane protein gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3033 CH63_3034 CH63_3034 CH63_3034 3355425 3355946 + ubiE/COQ5 methyltransferase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3034 CH63_3035 CH63_3035 CH63_3035 3356676 3357233 + methyltransferase small domain protein [I] COG3963 Phospholipid N-methyltransferase gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3035 CH63_3036 CH63_3036 aroL aroL 3357480 3358004 + shikimate kinase 2 [E] COG0703 Shikimate kinase gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3036 CH63_3037 CH63_3037 CH63_3037 3358494 3358781 + hypothetical protein conserved hypothetical protein~[S] COG3123 Uncharacterized protein conserved in bacteria gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3037 CH63_3038 CH63_3038 CH63_3038 3359017 3359934 - exonuclease%2C RdgC family protein [L] COG2974 DNA recombination-dependent growth factor C gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3038 CH63_3039 CH63_3039 CH63_3039 3359991 3361013 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3039 CH63_304 CH63_304 ilvN ilvN 318424 318726 - acetolactate synthase%2C small subunit [E] COG0440 Acetolactate synthase%2C small (regulatory) subunit gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_304 CH63_3040 CH63_3040 CH63_3040 3361013 3361525 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3040 CH63_3041 CH63_3041 CH63_3041 3361608 3361793 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3041 CH63_3042 CH63_3042 CH63_3042 3362222 3363136 + glucokinase family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3042 CH63_3043 CH63_3043 CH63_3043 3363738 3367427 - exonuclease SbcC family protein sbcc: exonuclease SbcC family protein~[L] COG0419 ATPase involved in DNA repair gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3043 CH63_3044 CH63_3044 sbcD sbcD 3367424 3368668 - exonuclease SbcCD%2C D subunit sbcd: exonuclease SbcCD%2C D subunit~[L] COG0420 DNA repair exonuclease gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3044 CH63_3045 CH63_3045 phoB phoB 3368936 3369625 + phosphate regulon transcriptional regulatory protein PhoB phoB: phosphate regulon transcriptional regulatory protein PhoB~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3045 CH63_3046 CH63_3046 phoR phoR 3369650 3370966 + phosphate regulon sensor kinase PhoR phoR_proteo: phosphate regulon sensor kinase PhoR~[T] COG0642 Signal transduction histidine kinase gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3046 CH63_3047 CH63_3047 pstS pstS 3370988 3372052 + phosphate ABC transporter%2C phosphate-binding protein PstS ptsS_2: phosphate binding family protein~[P] COG0226 ABC-type phosphate transport system%2C periplasmic component gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3047 CH63_3048 CH63_3048 brnQ brnQ 3372526 3373845 + branched-chain amino acid transport system II carrier protein livcs: branched-chain amino acid transport system II carrier protein~[E] COG1114 Branched-chain amino acid permeases gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3048 CH63_3049 CH63_3049 CH63_3049 3373921 3375312 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3049 CH63_305 CH63_305 CH63_305 318728 320394 - thiamine pyrophosphate enzyme%2C central domain protein pseudogene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_305 CH63_3050 CH63_3050 CH63_3050 3375873 3377702 + hypothetical protein alpha amylase%2C N-terminal ig-like domain protein~[G] COG0366 Glycosidases gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3050 CH63_3051 CH63_3051 CH63_3051 3377857 3378537 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3051 CH63_3052 CH63_3052 ggt ggt 3378745 3380259 - gamma-glutamyltransferase g_glut_trans: gamma-glutamyltransferase~[E] COG0405 Gamma-glutamyltransferase gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3052 CH63_3053 CH63_3053 CH63_3053 3380219 3380509 - gamma-glutamyltranspeptidase family protein [E] COG0405 Gamma-glutamyltransferase gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3053 CH63_3054 CH63_3054 CH63_3054 3380898 3381500 - hypothetical protein C-terminal domain of 1-Cys peroxiredoxin family protein~[O] COG0450 Peroxiredoxin gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3054 CH63_3055 CH63_3055 CH63_3055 3381799 3382380 - hypothetical protein conserved hypothetical protein~[S] COG3124 Uncharacterized protein conserved in bacteria gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3055 CH63_3056 CH63_3056 queA queA 3382583 3383653 + tRNA ribosyltransferase-isomerase S-adenosylmethionine:tRNA ribosyltransferase-isomerase~queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase~[J] COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3056 CH63_3057 CH63_3057 tgt tgt 3383746 3384870 + tRNA-guanine transglycosylase Q_tRNA_tgt: tRNA-guanine transglycosylase~[J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3057 CH63_3058 CH63_3058 yajC yajC 3384982 3385317 + preprotein translocase%2C YajC subunit yajC: preprotein translocase%2C YajC subunit~[U] COG1862 Preprotein translocase subunit YajC gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3058 CH63_3059 CH63_3059 secD secD 3385378 3387192 + export membrane protein SecD secD: -export membrane protein SecD~[U] COG0342 Preprotein translocase subunit SecD gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3059 CH63_3060 CH63_3060 secF secF 3387203 3388171 + export membrane protein secF -export membrane protein secF~[U] COG0341 Preprotein translocase subunit SecF gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3060 CH63_3061 CH63_3061 CH63_3061 3388378 3388836 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3061 CH63_3062 CH63_3062 CH63_3062 3389134 3389829 + hypothetical protein conserved hypothetical protein gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3062 CH63_3063 CH63_3063 CH63_3063 3389862 3390455 + putative membrane protein gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3063 CH63_3064 CH63_3064 nrdR nrdR 3390526 3390975 + transcriptional regulator NrdR [K] COG1327 Predicted transcriptional regulator%2C consists of a Zn-ribbon and ATP-cone domains gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3064 CH63_3065 CH63_3065 ribD ribD 3391125 3392234 + riboflavin biosynthesis protein RibD eubact_ribD: riboflavin biosynthesis protein RibD~[H] COG1985 Pyrimidine reductase%2C riboflavin biosynthesis gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3065 CH63_3066 CH63_3066 ribH ribH 3392370 3392840 + 6%2C7-dimethyl-8-ribityllumazine synthase lumazine-synth: 6%2C7-dimethyl-8-ribityllumazine synthase~[H] COG0054 Riboflavin synthase beta-chain gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3066 CH63_3067 CH63_3067 nusB nusB 3392861 3393277 + transcription antitermination factor NusB nusB: transcription antitermination factor NusB~[K] COG0781 Transcription termination factor gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3067 CH63_3068 CH63_3068 thiL thiL 3393518 3394507 + thiamine-phosphate kinase thiL: thiamine-phosphate kinase~[H] COG0611 Thiamine monophosphate kinase gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3068 CH63_3069 CH63_3069 pgpA pgpA 3394500 3394985 + phosphatidylglycerophosphatase A [I] COG1267 Phosphatidylglycerophosphatase A and related proteins gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3069 CH63_307 CH63_307 CH63_307 320996 321790 + hypothetical protein conserved hypothetical protein gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_307 CH63_3070 CH63_3070 CH63_3070 3395199 3395657 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3070 CH63_3071 CH63_3071 dxs dxs 3395836 3397695 - 1-deoxy-D-xylulose-5-phosphate synthase dxs: 1-deoxy-D-xylulose-5-phosphate synthase~[HI] COG1154 Deoxyxylulose-5-phosphate synthase gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3071 CH63_3072 CH63_3072 CH63_3072 3397851 3398771 - polyprenyl synthetase family protein [H] COG0142 Geranylgeranyl pyrophosphate synthase gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3072 CH63_3073 CH63_3073 xseB xseB 3398776 3399030 - exodeoxyribonuclease VII%2C small subunit xseB: exodeoxyribonuclease VII%2C small subunit~[L] COG1722 Exonuclease VII small subunit gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3073 CH63_3074 CH63_3074 thiI thiI 3399380 3400831 + tRNA sulfurtransferase ThiI [H] COG0301 Thiamine biosynthesis ATP pyrophosphatase gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3074 CH63_3075 CH63_3075 yajL yajL 3400899 3401489 - chaperone protein YajL [R] COG0693 Putative intracellular protease/amidase gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3075 CH63_3076 CH63_3076 CH63_3076 3401452 3402363 - 2-dehydropantoate 2-reductase family protein apbA_panE: 2-dehydropantoate 2-reductase family protein~[H] COG1893 Ketopantoate reductase gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3076 CH63_3077 CH63_3077 CH63_3077 3402595 3403086 + hypothetical protein conserved hypothetical protein~[S] COG1666 Uncharacterized protein conserved in bacteria gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3077 CH63_3078 CH63_3078 CH63_3078 3403210 3404574 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3078 CH63_3079 CH63_3079 cyoE cyoE 3405058 3405945 - protoheme IX farnesyltransferase cyoE_ctaB: protoheme IX farnesyltransferase~[O] COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3079 CH63_308 CH63_308 CH63_308 321959 322993 - bacterial virulence factor family protein [S] COG4458 Uncharacterized protein conserved in bacteria%2C putative virulence factor gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_308 CH63_3080 CH63_3080 cyoD cyoD 3405959 3406291 - cytochrome o ubiquinol oxidase subunit IV cyoD: cytochrome o ubiquinol oxidase subunit IV~[C] COG3125 Heme/copper-type cytochrome/quinol oxidase%2C subunit 4 gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3080 CH63_3081 CH63_3081 cyoC cyoC 3406291 3406905 - cytochrome o ubiquinol oxidase%2C subunit III cyoC: cytochrome o ubiquinol oxidase%2C subunit III~[C] COG1845 Heme/copper-type cytochrome/quinol oxidase%2C subunit 3 gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3081 CH63_3082 CH63_3082 cyoB cyoB 3406895 3408886 - cytochrome o ubiquinol oxidase%2C subunit I cyoB: cytochrome o ubiquinol oxidase%2C subunit I~[C] COG0843 Heme/copper-type cytochrome/quinol oxidases%2C subunit 1 gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3082 CH63_3083 CH63_3083 cyoA cyoA 3408891 3409847 - ubiquinol oxidase%2C subunit II cyoA: ubiquinol oxidase%2C subunit II~[C] COG1622 Heme/copper-type cytochrome/quinol oxidases%2C subunit 2 gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3083 CH63_3084 CH63_3084 CH63_3084 3410217 3410983 - nucleoside-specific channel-forming%2C Tsx family protein pseudogene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3084 CH63_3086 CH63_3086 CH63_3086 3411275 3412753 - AmpG-like permease family protein 2A0125: AmpG-like permease family protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3086 CH63_3087 CH63_3087 CH63_3087 3412871 3413449 - hypothetical protein conserved hypothetical protein~[M] COG3056 Uncharacterized lipoprotein gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3087 CH63_3088 CH63_3088 bolA bolA 3413804 3414118 + protein BolA [T] COG0271 Stress-induced morphogen (activity unknown) gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3088 CH63_3089 CH63_3089 CH63_3089 3414277 3414462 + hypothetical protein conserved hypothetical protein gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3089 CH63_309 CH63_309 CH63_309 323157 324434 - bacterial virulence factor family protein [S] COG4458 Uncharacterized protein conserved in bacteria%2C putative virulence factor gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_309 CH63_3090 CH63_3090 tig tig 3414535 3415839 + trigger factor tig: trigger factor~[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3090 CH63_3091 CH63_3091 clpP clpP 3416301 3416924 + ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP clpP: ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP~[OU] COG0740 Protease subunit of ATP-dependent Clp proteases gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3091 CH63_3092 CH63_3092 clpX clpX 3417130 3418401 + ATP-dependent Clp protease%2C ATP-binding subunit ClpX clpX: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~[O] COG1219 ATP-dependent protease Clp%2C ATPase subunit gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3092 CH63_3093 CH63_3093 lon lon 3418596 3420950 + endopeptidase La lon: endopeptidase La~[O] COG0466 ATP-dependent Lon protease%2C bacterial type gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3093 CH63_3094 CH63_3094 hupB hupB 3421168 3421440 + DNA-binding protein HU-beta [L] COG0776 Bacterial nucleoid DNA-binding protein gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3094 CH63_3095 CH63_3095 CH63_3095 3421741 3423627 + PPIC-type PPIASE domain protein [O] COG0760 Parvulin-like peptidyl-prolyl isomerase gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3095 CH63_3096 CH63_3096 CH63_3096 3423767 3424213 + competence ComEA helix-hairpin-helix repeat region domain protein [L] COG1555 DNA uptake protein and related DNA-binding proteins gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3096 CH63_3097 CH63_3097 tesC tesC 3424567 3424974 + long-chain acyl-CoA thioesterase tesC [R] COG0824 Predicted thioesterase gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3097 CH63_3098 CH63_3098 queC queC 3425060 3425758 - queuosine biosynthesis protein QueC [R] COG0603 Predicted PP-loop superfamily ATPase gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3098 CH63_3099 CH63_3099 CH63_3099 3426023 3427726 - bacterial extracellular solute-binding s%2C 5 Middle family protein [R] COG4533 ABC-type uncharacterized transport system%2C periplasmic component gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3099 CH63_31 CH63_31 CH63_31 29199 30221 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_31 CH63_310 CH63_310 CH63_310 324431 327502 - virulence factor SrfB family protein [S] COG4457 Uncharacterized protein conserved in bacteria%2C putative virulence factor gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_310 CH63_3100 CH63_3100 cof cof 3427831 3428652 + HMP-PP phosphatase [R] COG0561 Predicted hydrolases of the HAD superfamily gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3100 CH63_3101 CH63_3101 CH63_3101 3428864 3429904 - pyridoxal-phosphate dependent enzyme family protein [E] COG0031 Cysteine synthase gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3101 CH63_3102 CH63_3102 CH63_3102 3430030 3430491 + asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3102 CH63_3103 CH63_3103 CH63_3103 3430593 3432359 + ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3103 CH63_3104 CH63_3104 mdlB mdlB 3432352 3434175 + multidrug resistance-like ATP-binding protein MdlB [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3104 CH63_3105 CH63_3105 glnK glnK 3434585 3434923 + nitrogen regulatory protein P-II 2 [E] COG0347 Nitrogen regulatory protein PII gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3105 CH63_3106 CH63_3106 amt amt 3434963 3436252 + ammonium transporter family protein amt: ammonium transporter family protein~[P] COG0004 Ammonia permease gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3106 CH63_3107 CH63_3107 tesB tesB 3436512 3437372 - acyl-CoA thioesterase II tesB: acyl-CoA thioesterase II~[I] COG1946 Acyl-CoA thioesterase gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3107 CH63_3108 CH63_3108 CH63_3108 3437629 3438150 + type III secretion system lipochaperone family protein [S] COG3126 Uncharacterized protein conserved in bacteria gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3108 CH63_3109 CH63_3109 CH63_3109 3438286 3438675 - methylated-DNA--[]-cysteine S-methyltransferase family protein ogt: methylated-DNA--[]-cysteine S-methyltransferase family protein~[L] COG3695 Predicted methylated DNA-protein cysteine methyltransferase gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3109 CH63_311 CH63_311 CH63_311 327507 328940 - putative virulence effector protein SrfA gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_311 CH63_3110 CH63_3110 hha hha 3439563 3439766 - hemolysin expression-modulating protein gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3110 CH63_3111 CH63_3111 CH63_3111 3439815 3440183 - biofilm formation regulator YbaJ family protein gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3111 CH63_3112 CH63_3112 CH63_3112 3440342 3440695 - hypothetical protein conserved hypothetical protein gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3112 CH63_3113 CH63_3113 rpmJ rpmJ 3441569 3441712 - ribosomal protein L36 rpmJ_bact: ribosomal protein L36~[J] COG0257 Ribosomal protein L36 gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3113 CH63_3114 CH63_3114 rpmE rpmE 3441728 3441988 - ribosomal protein L31 L31: ribosomal protein L31~[J] COG0254 Ribosomal protein L31 gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3114 CH63_3115 CH63_3115 CH63_3115 3442174 3445326 - RND transporter%2C hydrophobe/amphiphile efflux-1 family protein 2A0602: RND transporter%2C hydrophobe/amphiphile efflux-1 family protein~[V] COG0841 Cation/multidrug efflux pump gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3115 CH63_3116 CH63_3116 CH63_3116 3445343 3446530 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3116 CH63_3117 CH63_3117 CH63_3117 3446675 3447331 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3117 CH63_3118 CH63_3118 ychN ychN 3447344 3447697 + protein ychN [P] COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3118 CH63_3119 CH63_3119 CH63_3119 3447993 3451355 + mechanosensitive ion channel family protein [M] COG3264 Small-conductance mechanosensitive channel gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3119 CH63_312 CH63_312 amn amn 329146 330636 + AMP nucleosidase AMP-nucleosdse: AMP nucleosidase~[F] COG0775 Nucleoside phosphorylase gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_312 CH63_3120 CH63_3120 CH63_3120 3452021 3452557 - primosomal replication priB and priC family protein [L] COG3923 Primosomal replication protein N'' gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3120 CH63_3121 CH63_3121 CH63_3121 3452758 3453138 + hypothetical protein conserved hypothetical protein~[S] COG2832 Uncharacterized protein conserved in bacteria gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3121 CH63_3122 CH63_3122 apt apt 3453377 3453889 + adenine phosphoribosyltransferase apt: adenine phosphoribosyltransferase~[F] COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3122 CH63_3123 CH63_3123 dnaX dnaX 3454595 3456571 + DNA polymerase III%2C subunit gamma and tau dnaX_nterm: DNA polymerase III%2C subunit gamma and tau~[L] COG2812 DNA polymerase III%2C gamma/tau subunits gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3123 CH63_3124 CH63_3124 CH63_3124 3456627 3456959 + DNA-binding protein%2C YbaB/EbfC family DNA_YbaB_EbfC: DNA-binding protein%2C YbaB/EbfC family~[S] COG0718 Uncharacterized protein conserved in bacteria gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3124 CH63_3125 CH63_3125 recR recR 3456989 3457564 + recombination protein RecR recR: recombination protein RecR~[L] COG0353 Recombinational DNA repair protein (RecF pathway) gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3125 CH63_3126 CH63_3126 CH63_3126 3457762 3459630 + hsp90 family protein [O] COG0326 Molecular chaperone%2C HSP90 family gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3126 CH63_3127 CH63_3127 CH63_3127 3459857 3460501 + adenylate kinase family protein adk: adenylate kinase family protein~[F] COG0563 Adenylate kinase and related kinases gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3127 CH63_3128 CH63_3128 hemH hemH 3460594 3461553 + ferrochelatase hemH: ferrochelatase~[H] COG0276 Protoheme ferro-lyase (ferrochelatase) gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3128 CH63_3129 CH63_3129 CH63_3129 3462151 3462465 + 2Fe-2S iron-sulfur cluster binding domain protein [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3129 CH63_313 CH63_313 CH63_313 331061 331879 - ABC transporter family protein [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system%2C ATPase component gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_313 CH63_3130 CH63_3130 ascD ascD 3462513 3463139 + CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3130 CH63_3131 CH63_3131 rfbF rfbF 3463177 3463950 + glucose-1-phosphate cytidylyltransferase G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase~[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B%2C gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3131 CH63_3132 CH63_3132 rfbG rfbG 3463955 3465028 + CDP-glucose 4%2C6-dehydratase CDP_4_6_dhtase: CDP-glucose 4%2C6-dehydratase~[MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3132 CH63_3133 CH63_3133 ddhC ddhC 3465046 3466359 + CDP-4-keto-6-deoxy-D-glucose-3-dehydrase [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3133 CH63_3134 CH63_3134 CH63_3134 3466396 3467253 + rmlD substrate binding domain protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3134 CH63_3135 CH63_3135 CH63_3135 3467254 3468537 + NAD(P)-binding Rossmann-like domain protein [H] COG1232 Protoporphyrinogen oxidase gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3135 CH63_3136 CH63_3136 CH63_3136 3468611 3469954 + putative membrane protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3136 CH63_3137 CH63_3137 CH63_3137 3469965 3470678 + glycosyl transferase 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3137 CH63_3138 CH63_3138 wbyI wbyI 3470644 3470886 + glycosyltransferase-like domain protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3138 CH63_3139 CH63_3139 CH63_3139 3471058 3472200 + glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3139 CH63_314 CH63_314 CH63_314 331889 332668 - binding--dependent transport system inner membrane component family protein [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_314 CH63_3140 CH63_3140 CH63_3140 3472197 3472637 + putative membrane protein gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3140 CH63_3141 CH63_3141 CH63_3141 3472612 3473418 + putative o-antigen polymerase gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3141 CH63_3142 CH63_3142 CH63_3142 3473667 3474680 + glycosyl transferases group 1 family protein [M] COG0438 Glycosyltransferase gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3142 CH63_3143 CH63_3143 CH63_3143 3474696 3475214 + rmlD substrate binding domain protein [M] COG1089 GDP-D-mannose dehydratase gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3143 CH63_3144 CH63_3144 CH63_3144 3475225 3475818 + NAD dependent epimerase/dehydratase family protein [M] COG1089 GDP-D-mannose dehydratase gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3144 CH63_3145 CH63_3145 fcl fcl 3475824 3476789 + GDP-L-fucose synthase [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3145 CH63_3146 CH63_3146 CH63_3146 3476983 3478389 + mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~[M] COG0836 Mannose-1-phosphate guanylyltransferase gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3146 CH63_3147 CH63_3147 CH63_3147 3478392 3479135 + glycosyltransferase like 2 family protein [M] COG0463 Glycosyltransferases involved in cell wall biogenesis gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3147 CH63_3148 CH63_3148 CH63_3148 3479140 3480513 + phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III family protein [G] COG1109 Phosphomannomutase gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3148 CH63_3149 CH63_3149 CH63_3149 3480561 3481712 + chain length determinant family protein [M] COG3765 Chain length determinant protein gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3149 CH63_315 CH63_315 CH63_315 332714 333745 - bacterial extracellular solute-binding s%2C 3 family protein [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems%2C periplasmic components gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_315 CH63_3150 CH63_3150 CH63_3150 3481916 3483220 + pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3150 CH63_3151 CH63_3151 CH63_3151 3483317 3485008 - transporter%2C monovalent cation:proton antiporter-2 family protein 2a37: transporter%2C monovalent cation:proton antiporter-2 family protein~[P] COG4651 Kef-type K+ transport system%2C predicted NAD-binding component gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3151 CH63_3152 CH63_3152 CH63_3152 3485243 3486457 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3152 CH63_3153 CH63_3153 CH63_3153 3486739 3486996 + putative protein UshA: UDP-sugar hydrolase [F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3153 CH63_3154 CH63_3154 CH63_3154 3486986 3487776 + ushA%3Bcalcineurin-like phosphoesterase family protein%3BushA domain protein pseudogene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3154 CH63_3156 CH63_3156 CH63_3156 3487770 3488393 + hypothetical protein 5'-nucleotidase%2C C-terminal domain protein~[F] COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3156 CH63_3157 CH63_3157 CH63_3157 3488497 3488736 - hypothetical protein conserved hypothetical protein gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3157 CH63_3158 CH63_3158 CH63_3158 3488750 3489007 - hypothetical protein conserved hypothetical protein gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3158 CH63_3159 CH63_3159 ybaK ybaK 3489073 3489552 - cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK [S] COG2606 Uncharacterized conserved protein gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3159 CH63_316 CH63_316 CH63_316 334184 334534 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_316 CH63_3160 CH63_3160 CH63_3160 3489816 3490625 - traB family protein [S] COG3735 Uncharacterized protein conserved in bacteria gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3160 CH63_3161 CH63_3161 CH63_3161 3491146 3494031 - copper-translocating P-type ATPase ATPase-IB1_Cu: copper-translocating P-type ATPase~[P] COG2217 Cation transport ATPase gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3161 CH63_3162 CH63_3162 cueR cueR 3494238 3494657 + Cu(I)-responsive transcriptional regulator cueR: Cu(I)-responsive transcriptional regulator~[K] COG0789 Predicted transcriptional regulators gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3162 CH63_3163 CH63_3163 ybbJ ybbJ 3494766 3495215 - inner membrane protein ybbJ [OU] COG1585 Membrane protein implicated in regulation of membrane protease activity gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3163 CH63_3164 CH63_3164 CH63_3164 3495218 3496132 - SPFH domain / Band 7 family protein [O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3164 CH63_3165 CH63_3165 CH63_3165 3496327 3497196 - thioredoxin family protein [O] COG3118 Thioredoxin domain-containing protein gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3165 CH63_3166 CH63_3166 CH63_3166 3497273 3498049 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3166 CH63_3167 CH63_3167 CH63_3167 3498436 3499008 - GDSL-like Lipase/Acylhydrolase family protein [E] COG2755 Lysophospholipase L1 and related esterases gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3167 CH63_3168 CH63_3168 CH63_3168 3499042 3499728 + ABC transporter family protein [Q] COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis%2C ATPase component gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3168 CH63_3169 CH63_3169 CH63_3169 3499725 3502154 + ftsX-like permease family protein [Q] COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis%2C permease component gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3169 CH63_317 CH63_317 CH63_317 334678 335148 + hypothetical protein conserved hypothetical protein gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_317 CH63_3170 CH63_3170 purK purK 3502198 3503262 - phosphoribosylaminoimidazole carboxylase%2C ATPase subunit purK: phosphoribosylaminoimidazole carboxylase%2C ATPase subunit~[F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3170 CH63_3171 CH63_3171 purE purE 3503259 3503783 - phosphoribosylaminoimidazole carboxylase catalytic subunit PurE [F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3171 CH63_3172 CH63_3172 lpxH lpxH 3504079 3504801 - UDP-2%2C3-diacylglucosamine diphosphatase lipid_A_lpxH: UDP-2%2C3-diacylglucosamine diphosphatase~[S] COG2908 Uncharacterized protein conserved in bacteria gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3172 CH63_3173 CH63_3173 ppiB ppiB 3504812 3505306 - peptidyl-prolyl cis-trans isomerase B [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3173 CH63_3174 CH63_3174 cysS cysS 3505517 3506902 + cysteine--tRNA ligase cysS: cysteine--tRNA ligase~[J] COG0215 Cysteinyl-tRNA synthetase gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3174 CH63_3175 CH63_3175 CH63_3175 3507029 3507259 + hypothetical protein conserved hypothetical protein gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3175 CH63_3176 CH63_3176 CH63_3176 3507249 3507707 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3176 CH63_3177 CH63_3177 CH63_3177 3507854 3508066 - hypothetical protein conserved hypothetical protein~[S] COG2501 Uncharacterized conserved protein gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3177 CH63_3178 CH63_3178 folD folD 3508081 3508947 - bifunctional protein FolD protein bifunctional protein FolD~[H] COG0190 5%2C10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3178 CH63_3179 CH63_3179 CH63_3179 3509162 3509238 + tRNA-Arg tRNA gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3179 CH63_318 CH63_318 CH63_318 335212 336228 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_318 CH63_3180 CH63_3180 CH63_3180 3510057 3510554 - hypothetical protein conserved hypothetical protein gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3180 CH63_3181 CH63_3181 CH63_3181 3510592 3510705 - hypothetical protein conserved hypothetical protein gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3181 CH63_3182 CH63_3182 CH63_3182 3510690 3511028 - hypothetical protein conserved hypothetical protein gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3182 CH63_3183 CH63_3183 CH63_3183 3511562 3511807 + hypothetical protein conserved hypothetical protein gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3183 CH63_3184 CH63_3184 CH63_3184 3511804 3511980 + rhs element Vgr domain protein gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3184 CH63_3185 CH63_3185 ynbA ynbA 3512207 3512809 + inner membrane protein ynbA [I] COG0558 Phosphatidylglycerophosphate synthase gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3185 CH63_3186 CH63_3186 CH63_3186 3512802 3513731 + cytidylyltransferase family protein [R] COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3186 CH63_3187 CH63_3187 CH63_3187 3513741 3514373 + acyltransferase family protein [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3187 CH63_3188 CH63_3188 CH63_3188 3514370 3516133 + alpha/beta hydrolase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3188 CH63_3189 CH63_3189 CH63_3189 3516126 3517445 + hypothetical protein conserved hypothetical protein~[I] COG0671 Membrane-associated phospholipid phosphatase gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3189 CH63_319 CH63_319 CH63_319 336828 338108 + voltage gated chloride channel family protein [P] COG0038 Chloride channel protein EriC gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_319 CH63_3190 CH63_3190 CH63_3190 3517427 3517828 + putative Zn-dependent hydrolases of the beta-lactamase fold protein putative predicted Zn-dependent hydrolases of the beta-lactamase fold gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3190 CH63_3191 CH63_3191 CH63_3191 3517925 3518230 + hypothetical protein conserved hypothetical protein gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3191 CH63_3192 CH63_3192 CH63_3192 3518597 3519376 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3192 CH63_3193 CH63_3193 CH63_3193 3519376 3519654 - putative transposase Orf A%2C insertion element IS100 [L] COG4584 Transposase and inactivated derivatives gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3193 CH63_3194 CH63_3194 CH63_3194 3519846 3520400 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3194 CH63_3195 CH63_3195 CH63_3195 3520494 3521387 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3195 CH63_3196 CH63_3196 CH63_3196 3521442 3522431 - aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3196 CH63_3197 CH63_3197 CH63_3197 3522457 3523308 - aldo/keto reductase family protein [R] COG0656 Aldo/keto reductases%2C related to diketogulonate reductase gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3197 CH63_3198 CH63_3198 CH63_3198 3523781 3525409 + hypothetical protein conserved hypothetical protein gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3198 CH63_3199 CH63_3199 bglB bglB 3525488 3527869 - thermostable beta-glucosidase B [G] COG1472 Beta-glucosidase-related glycosidases gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3199 CH63_32 CH63_32 CH63_32 30221 31000 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_32 CH63_320 CH63_320 bioD bioD 338231 338899 - dethiobiotin synthase bioD: dethiobiotin synthase~[H] COG0132 Dethiobiotin synthetase gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_320 CH63_3200 CH63_3200 CH63_3200 3528028 3528558 - GDYXXLXY family protein [S] COG4929 Uncharacterized membrane-anchored protein gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3200 CH63_3201 CH63_3201 CH63_3201 3528551 3530758 - hypothetical protein conserved hypothetical protein~[S] COG4984 Predicted membrane protein gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3201 CH63_3202 CH63_3202 CH63_3202 3531210 3532418 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3202 CH63_3203 CH63_3203 CH63_3203 3532497 3532805 + putative cytoplasmic protein [S] COG2850 Uncharacterized conserved protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3203 CH63_3204 CH63_3204 CH63_3204 3532820 3533401 - hypothetical protein conserved hypothetical protein gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3204 CH63_3205 CH63_3205 CH63_3205 3533936 3535852 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3205 CH63_3206 CH63_3206 CH63_3206 3536661 3536900 + hypothetical protein conserved hypothetical protein gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3206 CH63_3207 CH63_3207 CH63_3207 3536939 3537190 + hypothetical protein conserved hypothetical protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3207 CH63_3208 CH63_3208 CH63_3208 3537214 3537786 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3208 CH63_3209 CH63_3209 CH63_3209 3537798 3538052 - hypothetical protein conserved hypothetical protein gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3209 CH63_321 CH63_321 CH63_321 338966 339061 + hypothetical protein gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_321 CH63_3210 CH63_3210 CH63_3210 3538433 3538834 - hypothetical protein conserved hypothetical protein gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3210 CH63_3211 CH63_3211 CH63_3211 3538827 3539072 - putative membrane protein gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3211 CH63_3212 CH63_3212 CH63_3212 3539103 3539684 - putative membrane protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3212 CH63_3213 CH63_3213 CH63_3213 3540142 3540252 - putative membrane protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3213 CH63_3214 CH63_3214 CH63_3214 3540357 3540602 + winged helix-turn-helix DNA-binding family protein [K] COG3423 Predicted transcriptional regulator gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3214 CH63_3215 CH63_3215 pbpC pbpC 3540815 3543160 - penicillin-binding protein 1C PBP_1c: penicillin-binding protein 1C~[M] COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3215 CH63_3216 CH63_3216 CH63_3216 3543171 3543383 + hypothetical protein conserved hypothetical protein gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3216 CH63_3217 CH63_3217 CH63_3217 3543373 3543831 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3217 CH63_3218 CH63_3218 CH63_3218 3543946 3549924 - MG2 domain protein [R] COG2373 Large extracellular alpha-helical protein gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3218 CH63_3219 CH63_3219 CH63_3219 3550061 3550225 + hypothetical protein conserved hypothetical protein gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3219 CH63_322 CH63_322 CH63_322 339123 340340 - ROK family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_322 CH63_3220 CH63_3220 CH63_3220 3550331 3550879 - hypothetical protein conserved hypothetical protein~[S] COG3477 Predicted periplasmic/secreted protein gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3220 CH63_3221 CH63_3221 CH63_3221 3551513 3552367 - SIS domain protein [K] COG1737 Transcriptional regulators gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3221 CH63_3222 CH63_3222 CH63_3222 3552367 3552504 - hypothetical protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3222 CH63_3223 CH63_3223 mmsA mmsA 3552721 3554247 + methylmalonate-semialdehyde dehydrogenase MMSDH: methylmalonate-semialdehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3223 CH63_3224 CH63_3224 iolD iolD 3554282 3556207 + 3%2C5/4-trihydroxycyclohexa-1%2C2-dione hydrolase myo_inos_iolD: 3%2C5/4-trihydroxycyclohexa-1%2C2-dione hydrolase~[E] COG3962 Acetolactate synthase gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3224 CH63_3225 CH63_3225 CH63_3225 3556501 3557010 + oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3225 CH63_3226 CH63_3226 CH63_3226 3557007 3557486 + hypothetical protein oxidoreductase family%2C C-terminal alpha/beta domain protein~[R] COG0673 Predicted dehydrogenases and related proteins gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3226 CH63_3227 CH63_3227 CH63_3227 3557612 3558541 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3227 CH63_3228 CH63_3228 CH63_3228 3558590 3560137 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3228 CH63_3229 CH63_3229 CH63_3229 3560149 3561177 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3229 CH63_323 CH63_323 CH63_323 340554 341432 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_323 CH63_3230 CH63_3230 CH63_3230 3561201 3562334 + hypothetical protein oxidoreductase family%2C C-terminal alpha/beta domain protein~[R] COG0673 Predicted dehydrogenases and related proteins gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3230 CH63_3231 CH63_3231 iolC iolC 3562366 3564336 + 5-dehydro-2-deoxygluconokinase myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase~[G] COG0524 Sugar kinases%2C ribokinase family gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3231 CH63_3232 CH63_3232 iolE iolE 3564357 3565409 + myo-inosose-2 dehydratase myo_inos_iolE: myo-inosose-2 dehydratase~[G] COG1082 Sugar phosphate isomerases/epimerases gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3232 CH63_3233 CH63_3233 iolB iolB 3565419 3566234 + 5-deoxy-glucuronate isomerase myo_inos_iolB: 5-deoxy-glucuronate isomerase~[G] COG3718 Uncharacterized enzyme involved in inositol metabolism gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3233 CH63_3234 CH63_3234 CH63_3234 3566394 3566597 + putative membrane protein gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3234 CH63_3235 CH63_3235 CH63_3235 3566805 3568595 + ABC transporter family protein [O] COG5265 ABC-type transport system involved in Fe-S cluster assembly%2C permease and ATPase components gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3235 CH63_3236 CH63_3236 CH63_3236 3568611 3568898 - antibiotic biosynthesis monooxygenase family protein [S] COG1359 Uncharacterized conserved protein gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3236 CH63_3237 CH63_3237 CH63_3237 3569341 3569535 + glycogen synthesis family protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3237 CH63_3238 CH63_3238 CH63_3238 3569553 3569735 - hypothetical protein conserved hypothetical protein gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3238 CH63_3239 CH63_3239 CH63_3239 3569917 3570882 - putative membrane protein [S] COG3274 Uncharacterized protein conserved in bacteria gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3239 CH63_324 CH63_324 CH63_324 341645 342763 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_324 CH63_3240 CH63_3240 CH63_3240 3571332 3571922 + bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3240 CH63_3241 CH63_3241 CH63_3241 3572232 3572711 - putative cold-shock protein gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3241 CH63_3242 CH63_3242 cspE cspE 3572990 3573199 + RNA chaperone%2C negative regulator of cspA transcription [K] COG1278 Cold shock proteins gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3242 CH63_3243 CH63_3243 crcB crcB 3573622 3574005 - protein CrcB [D] COG0239 Integral membrane protein possibly involved in chromosome condensation gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3243 CH63_3244 CH63_3244 tatA tatA 3574572 3574829 + twin arginine-targeting translocase%2C TatA/E family protein tatAE: twin arginine-targeting translocase%2C TatA/E family protein~[U] COG1826 Sec-independent protein secretion pathway components gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3244 CH63_3245 CH63_3245 lipA lipA 3575010 3575975 - lipoyl synthase lipA: lipoyl synthase~[H] COG0320 Lipoate synthase gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3245 CH63_3246 CH63_3246 lipB lipB 3576168 3576866 - lipoyl(octanoyl) transferase lipB: lipoyl(octanoyl) transferase~[H] COG0321 Lipoate-protein ligase B gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3246 CH63_3247 CH63_3247 CH63_3247 3577081 3577344 - hypothetical protein conserved hypothetical protein~[S] COG2921 Uncharacterized conserved protein gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3247 CH63_3248 CH63_3248 CH63_3248 3577542 3578744 - D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3248 CH63_3249 CH63_3249 rlpA rlpA 3579147 3580229 - rare lipoA family protein rlpA: rare lipoA family protein~[M] COG0797 Lipoproteins gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3249 CH63_325 CH63_325 tus tus 343148 344083 + DNA replication terminus site-binding protein rep_term_tus: DNA replication terminus site-binding protein gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_325 CH63_3250 CH63_3250 mrdB mrdB 3580239 3581351 - rod shape-determining protein RodA rodA_shape: rod shape-determining protein RodA~[D] COG0772 Bacterial cell division membrane protein gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3250 CH63_3251 CH63_3251 mrdA mrdA 3581536 3583431 - penicillin-binding protein 2 pbp2_mrdA: penicillin-binding protein 2~[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3251 CH63_3252 CH63_3252 rlmH rlmH 3583513 3583983 - rRNA large subunit m3Psi methyltransferase RlmH tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH~[S] COG1576 Uncharacterized conserved protein gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3252 CH63_3253 CH63_3253 rsfS rsfS 3583987 3584304 - ribosome silencing factor rsfS_iojap_ybeB: ribosome silencing factor~[S] COG0799 Uncharacterized homolog of plant Iojap protein gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3253 CH63_3254 CH63_3254 nadD nadD 3584528 3585190 - nicotinate (nicotinamide) nucleotide adenylyltransferase [H] COG1057 Nicotinic acid mononucleotide adenylyltransferase gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3254 CH63_3255 CH63_3255 holA holA 3585180 3586214 - DNA polymerase III%2C delta subunit holA: DNA polymerase III%2C delta subunit~[L] COG1466 DNA polymerase III%2C delta subunit gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3255 CH63_3256 CH63_3256 CH63_3256 3586211 3586834 - lipopolysaccharide-assembly family protein [M] COG2980 Rare lipoprotein B gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3256 CH63_3257 CH63_3257 leuS leuS 3586849 3589431 - leucine--tRNA ligase leuS_bact: leucine--tRNA ligase~[J] COG0495 Leucyl-tRNA synthetase gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3257 CH63_3258 CH63_3258 CH63_3258 3589692 3590174 + hypothetical protein conserved hypothetical protein gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3258 CH63_3259 CH63_3259 CH63_3259 3590308 3591033 - ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3259 CH63_326 CH63_326 fumC fumC 344163 345560 - fumarate hydratase%2C class II fumC_II: fumarate hydratase%2C class II~[C] COG0114 Fumarase gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_326 CH63_3260 CH63_3260 CH63_3260 3591033 3591707 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3260 CH63_3261 CH63_3261 CH63_3261 3591707 3592447 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3261 CH63_3262 CH63_3262 CH63_3262 3592621 3593538 - bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3262 CH63_3263 CH63_3263 lnt lnt 3594303 3595850 - apolipoprotein N-acyltransferase lnt: apolipoprotein N-acyltransferase~[M] COG0815 Apolipoprotein N-acyltransferase gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3263 CH63_3264 CH63_3264 corC corC 3595858 3596736 - magnesium and cobalt efflux protein CorC [P] COG4535 Putative Mg2+ and Co2+ transporter CorC gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3264 CH63_3265 CH63_3265 CH63_3265 3596854 3597327 - putative rRNA maturation factor YbeY [R] COG0319 Predicted metal-dependent hydrolase gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3265 CH63_3266 CH63_3266 ybeZ ybeZ 3597324 3598379 - phoH-like protein [T] COG1702 Phosphate starvation-inducible protein PhoH%2C predicted ATPase gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3266 CH63_3267 CH63_3267 miaB miaB 3598724 3600148 - tRNA-i(6)A37 thiotransferase enzyme MiaB miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB~[J] COG0621 2-methylthioadenine synthetase gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3267 CH63_3268 CH63_3268 CH63_3268 3600390 3601571 + ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein ubi-OHases: ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family protein~[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3268 CH63_3269 CH63_3269 CH63_3269 3601965 3602039 - tRNA-Gln tRNA gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3269 CH63_327 CH63_327 manA manA 345940 347019 + mannose-6-phosphate isomerase%2C class I manA: mannose-6-phosphate isomerase%2C class I~[G] COG1482 Phosphomannose isomerase gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_327 CH63_3270 CH63_3270 CH63_3270 3602045 3602121 - tRNA-Met tRNA gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3270 CH63_3271 CH63_3271 CH63_3271 3602154 3602228 - tRNA-Gln tRNA gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3271 CH63_3272 CH63_3272 CH63_3272 3602312 3602386 - tRNA-Gln tRNA gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3272 CH63_3273 CH63_3273 CH63_3273 3602416 3602500 - tRNA-Leu tRNA gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3273 CH63_3274 CH63_3274 CH63_3274 3602508 3602584 - tRNA-Met tRNA gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3274 CH63_3275 CH63_3275 asnB asnB 3603042 3604706 - asparagine synthase asn_synth_AEB: asparagine synthase~[E] COG0367 Asparagine synthase (glutamine-hydrolyzing) gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3275 CH63_3276 CH63_3276 CH63_3276 3605061 3605813 - HAD hydrolase%2C IA%2C variant 1 family protein HAD-SF-IA-v1: HAD hydrolase%2C IA%2C variant 1 family protein~[G] COG0647 Predicted sugar phosphatases of the HAD superfamily gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3276 CH63_3277 CH63_3277 CH63_3277 3605886 3607112 - marR family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3277 CH63_3278 CH63_3278 nagA nagA 3607129 3608274 - N-acetylglucosamine-6-phosphate deacetylase nagA: N-acetylglucosamine-6-phosphate deacetylase~[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3278 CH63_3279 CH63_3279 nagB nagB 3608294 3609094 - glucosamine-6-phosphate deaminase nagB: glucosamine-6-phosphate deaminase~[G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3279 CH63_328 CH63_328 CH63_328 347259 348803 + hypothetical protein conserved hypothetical protein~[S] COG5339 Uncharacterized protein conserved in bacteria gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_328 CH63_3280 CH63_3280 nagE nagE 3609494 3611527 + PTS system%2C N-acetylglucosamine-specific IIBC component PTS-II-BC-nag: PTS system%2C N-acetylglucosamine-specific IIBC component~[G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3280 CH63_3281 CH63_3281 CH63_3281 3611792 3612064 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3281 CH63_3282 CH63_3282 CH63_3282 3612054 3612251 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3282 CH63_3283 CH63_3283 glnS glnS 3612453 3614120 + glutamine--tRNA ligase glnS: glutamine--tRNA ligase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3283 CH63_3284 CH63_3284 CH63_3284 3614826 3616247 + outer membrane porin%2C OprD family protein gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3284 CH63_3285 CH63_3285 CH63_3285 3616575 3617198 + putative carbohydrate binding domain protein [G] COG3525 N-acetyl-beta-hexosaminidase gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3285 CH63_3286 CH63_3286 chb chb 3617176 3619239 + chitobiase [G] COG3525 N-acetyl-beta-hexosaminidase gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3286 CH63_3287 CH63_3287 fur fur 3619680 3620126 - ferric uptake regulation protein [P] COG0735 Fe2+/Zn2+ uptake regulation proteins gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3287 CH63_3288 CH63_3288 CH63_3288 3620493 3621020 - flavodoxin flav_long: flavodoxin~[C] COG0716 Flavodoxins gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3288 CH63_3289 CH63_3289 CH63_3289 3621437 3621724 - ribbon-helix-helix%2C copG family protein gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3289 CH63_329 CH63_329 CH63_329 348852 349451 - hypothetical protein conserved hypothetical protein gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_329 CH63_3290 CH63_3290 CH63_3290 3621899 3622006 - hypothetical protein gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3290 CH63_3291 CH63_3291 CH63_3291 3622056 3622823 - PGAP1-like family protein [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3291 CH63_3292 CH63_3292 CH63_3292 3623534 3623785 + putative exported protein gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3292 CH63_3293 CH63_3293 CH63_3293 3624216 3624479 - transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3293 CH63_3294 CH63_3294 CH63_3294 3624528 3624890 - hypothetical protein conserved hypothetical protein~[L] COG0582 Integrase gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3294 CH63_3295 CH63_3295 CH63_3295 3625026 3625688 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3295 CH63_3296 CH63_3296 CH63_3296 3625660 3626826 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3296 CH63_3297 CH63_3297 CH63_3297 3626883 3627650 + polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3297 CH63_3298 CH63_3298 CH63_3298 3627880 3628884 - substrate binding domain of ABC-type glycine betaine transport system family protein [E] COG2113 ABC-type proline/glycine betaine transport systems%2C periplasmic components gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3298 CH63_3299 CH63_3299 CH63_3299 3628932 3630098 - binding--dependent transport system inner membrane component family protein [E] COG4176 ABC-type proline/glycine betaine transport system%2C permease component gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3299 CH63_33 CH63_33 CH63_33 31168 31428 - hypothetical protein conserved hypothetical protein gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_33 CH63_330 CH63_330 CH63_330 349657 350685 - hypothetical protein conserved hypothetical protein~[R] COG0385 Predicted Na+-dependent transporter gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_330 CH63_3300 CH63_3300 proV proV 3630091 3631290 - glycine betaine/L-proline transport ATP binding subunit proV: glycine betaine/L-proline transport ATP binding subunit~[E] COG4175 ABC-type proline/glycine betaine transport system%2C ATPase component gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3300 CH63_3301 CH63_3301 CH63_3301 3631966 3632937 - ribonucleotide reductase%2C small chain family protein [F] COG0208 Ribonucleotide reductase%2C beta subunit gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3301 CH63_3302 CH63_3302 CH63_3302 3633062 3635143 - ribonucleoside-diphosphate reductase%2C alpha subunit nrdE_NrdA: ribonucleoside-diphosphate reductase%2C alpha subunit~[F] COG0209 Ribonucleotide reductase%2C alpha subunit gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3302 CH63_3303 CH63_3303 CH63_3303 3635397 3635639 - nrdI Flavodoxin like family protein [F] COG1780 Protein involved in ribonucleotide reduction gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3303 CH63_3304 CH63_3304 nrdH nrdH 3635611 3635847 - glutaredoxin-like NrdH family protein glrX_NrdH: glutaredoxin-like NrdH family protein~[O] COG0695 Glutaredoxin and related proteins gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3304 CH63_3305 CH63_3305 CH63_3305 3636368 3636733 + acid shock repeat family protein gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3305 CH63_3306 CH63_3306 CH63_3306 3637211 3637546 + hypothetical protein conserved hypothetical protein gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3306 CH63_3307 CH63_3307 CH63_3307 3637644 3638093 - hypothetical protein conserved hypothetical protein gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3307 CH63_3308 CH63_3308 CH63_3308 3638258 3638596 - mbeD/MobD like family protein gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3308 CH63_3309 CH63_3309 cspG cspG 3639104 3639316 + cold shock-like protein CspG [K] COG1278 Cold shock proteins gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3309 CH63_331 CH63_331 CH63_331 350879 351928 - putative oxidoreductase [R] COG0673 Predicted dehydrogenases and related proteins gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_331 CH63_3310 CH63_3310 CH63_3310 3640123 3641700 + bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG0747 ABC-type dipeptide transport system%2C periplasmic component gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3310 CH63_3311 CH63_3311 CH63_3311 3641700 3642668 + binding--dependent transport system inner membrane component family protein [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3311 CH63_3312 CH63_3312 CH63_3312 3642665 3643471 + binding--dependent transport system inner membrane component family protein [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3312 CH63_3313 CH63_3313 CH63_3313 3643471 3644277 + ABC transporter family protein [R] COG1123 ATPase components of various ABC-type transport systems%2C contain duplicated ATPase gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3313 CH63_3314 CH63_3314 CH63_3314 3644270 3644935 + ABC transporter family protein [EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3314 CH63_3315 CH63_3315 CH63_3315 3645054 3645179 + hypothetical protein conserved hypothetical protein gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3315 CH63_3316 CH63_3316 ureA ureA 3646133 3646435 + urease subunit gamma [E] COG0831 Urea amidohydrolase (urease) gamma subunit gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3316 CH63_3317 CH63_3317 ureB ureB 3646488 3646922 + urease subunit beta [E] COG0832 Urea amidohydrolase (urease) beta subunit gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3317 CH63_3318 CH63_3318 ureC ureC 3647012 3648730 + urease%2C alpha subunit urease_alph: urease%2C alpha subunit~[E] COG0804 Urea amidohydrolase (urease) alpha subunit gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3318 CH63_3319 CH63_3319 CH63_3319 3649026 3649721 + hypothetical protein ureE urease accessory%2C C-terminal domain protein~[O] COG2371 Urease accessory protein UreE gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3319 CH63_332 CH63_332 CH63_332 352056 352988 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_332 CH63_3320 CH63_3320 CH63_3320 3649743 3650429 + ureF family protein [O] COG0830 Urease accessory protein UreF gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3320 CH63_3321 CH63_3321 ureG ureG 3650556 3651218 + urease accessory protein UreG ureG: urease accessory protein UreG~[OK] COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3321 CH63_3322 CH63_3322 CH63_3322 3651215 3652048 + ureD urease accessory family protein [O] COG0829 Urease accessory protein UreH gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3322 CH63_3323 CH63_3323 yut yut 3652373 3653365 + urea transporter urea_trans_yut: urea transporter~[E] COG4413 Urea transporter gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3323 CH63_3324 CH63_3324 CH63_3324 3653514 3654572 + transition metal uptake transporter%2C Ni2+-Co2+ transporter family protein nico: transition metal uptake transporter%2C Ni2+-Co2+ transporter family protein~[P] COG3376 High-affinity nickel permease gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3324 CH63_3325 CH63_3325 hdeB hdeB 3654741 3655070 - protein hdeB gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3325 CH63_3326 CH63_3326 CH63_3326 3655688 3656863 + trkA-N domain protein [P] COG1226 Kef-type K+ transport systems%2C predicted NAD-binding component gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3326 CH63_3327 CH63_3327 CH63_3327 3656961 3657365 - crcB-like family protein [D] COG0239 Integral membrane protein possibly involved in chromosome condensation gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3327 CH63_3328 CH63_3328 CH63_3328 3657381 3657761 - crcB-like family protein [D] COG0239 Integral membrane protein possibly involved in chromosome condensation gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3328 CH63_3329 CH63_3329 chbB chbB 3658802 3659119 + N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIB component [G] COG1440 Phosphotransferase system cellobiose-specific component IIB gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3329 CH63_333 CH63_333 CH63_333 353209 354258 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_333 CH63_3330 CH63_3330 celB celB 3659130 3660491 + PTS system%2C cellobiose-specific IIC component cello_pts_IIC: PTS system%2C cellobiose-specific IIC component~[G] COG1455 Phosphotransferase system cellobiose-specific component IIC gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3330 CH63_3331 CH63_3331 chbA chbA 3660658 3661005 + N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIA component [G] COG1447 Phosphotransferase system cellobiose-specific component IIA gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3331 CH63_3332 CH63_3332 chbR chbR 3661054 3661884 + HTH-type transcriptional regulator ChbR [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3332 CH63_3333 CH63_3333 CH63_3333 3661936 3662697 + ydjC-like family protein [S] COG3394 Uncharacterized protein conserved in bacteria gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3333 CH63_3334 CH63_3334 CH63_3334 3662704 3662880 - putative membrane protein gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3334 CH63_3335 CH63_3335 CH63_3335 3662992 3663360 - hypothetical protein conserved hypothetical protein~[S] COG4461 Uncharacterized protein conserved in bacteria%2C putative lipoprotein gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3335 CH63_3336 CH63_3336 seqA seqA 3663855 3664382 + protein seqA [L] COG3057 Negative regulator of replication initiationR gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3336 CH63_3337 CH63_3337 pgm pgm 3664455 3666098 + phosphoglucomutase%2C alpha-D-glucose phosphate-specific pgm: phosphoglucomutase%2C alpha-D-glucose phosphate-specific~[G] COG0033 Phosphoglucomutase gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3337 CH63_3338 CH63_3338 CH63_3338 3666316 3666429 + hypothetical protein conserved hypothetical protein gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3338 CH63_3339 CH63_3339 CH63_3339 3666472 3666714 + hypothetical protein conserved hypothetical protein gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3339 CH63_334 CH63_334 CH63_334 354276 355847 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_334 CH63_3340 CH63_3340 CH63_3340 3666842 3667270 - eamA-like transporter family protein [S] COG2510 Predicted membrane protein gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3340 CH63_3341 CH63_3341 CH63_3341 3667365 3667994 - hypothetical protein transcriptional regulatory%2C C terminal family protein~[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3341 CH63_3342 CH63_3342 CH63_3342 3668287 3671013 - universal stress family protein [T] COG2205 Osmosensitive K+ channel histidine kinase gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3342 CH63_3343 CH63_3343 kdpC kdpC 3671023 3671625 - K+-transporting ATPase%2C C subunit kdpC: K+-transporting ATPase%2C C subunit~[P] COG2156 K+-transporting ATPase%2C c chain gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3343 CH63_3344 CH63_3344 kdpB kdpB 3671837 3673903 - K+-transporting ATPase%2C B subunit kdpB: K+-transporting ATPase%2C B subunit~[P] COG2216 High-affinity K+ transport system%2C ATPase chain B gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3344 CH63_3345 CH63_3345 kdpA kdpA 3673997 3675685 - K+-transporting ATPase%2C A subunit kdpA: K+-transporting ATPase%2C A subunit~[P] COG2060 K+-transporting ATPase%2C A chain gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3345 CH63_3346 CH63_3346 CH63_3346 3676180 3676386 + hypothetical protein conserved hypothetical protein gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3346 CH63_3347 CH63_3347 CH63_3347 3676725 3677207 + hypothetical protein conserved hypothetical protein~[S] COG3272 Uncharacterized conserved protein gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3347 CH63_3348 CH63_3348 CH63_3348 3677337 3678800 + FAD binding domain of DNA photolyase family protein [L] COG0415 Deoxyribodipyrimidine photolyase gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3348 CH63_3349 CH63_3349 CH63_3349 3678791 3679828 + cAMP phosphodiesterases class-II family protein [T] COG5212 Low-affinity cAMP phosphodiesterase gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3349 CH63_335 CH63_335 CH63_335 355945 356928 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_335 CH63_3350 CH63_3350 CH63_3350 3679971 3680714 + NIF3 family protein [S] COG0327 Uncharacterized conserved protein gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3350 CH63_3351 CH63_3351 CH63_3351 3680799 3680954 - hypothetical protein conserved hypothetical protein gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3351 CH63_3352 CH63_3352 CH63_3352 3681372 3681878 + allophanate hydrolase subunit 1 family protein [E] COG2049 Allophanate hydrolase subunit 1 gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3352 CH63_3353 CH63_3353 CH63_3353 3681983 3682933 + hypothetical protein conserved hypothetical protein~[E] COG1984 Allophanate hydrolase subunit 2 gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3353 CH63_3354 CH63_3354 CH63_3354 3682930 3683668 + lamB/YcsF family protein pseudogene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3354 CH63_3356 CH63_3356 CH63_3356 3683753 3684484 + hypothetical protein conserved hypothetical protein~[S] COG3819 Predicted membrane protein gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3356 CH63_3357 CH63_3357 CH63_3357 3684481 3685500 + hypothetical protein conserved hypothetical protein~[S] COG3817 Predicted membrane protein gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3357 CH63_3358 CH63_3358 pcp pcp 3685510 3686157 + pyroglutamyl-peptidase I pyro_pdase: pyroglutamyl-peptidase I~[O] COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3358 CH63_3359 CH63_3359 ung ung 3686248 3686935 - uracil-DNA glycosylase%3Buracil DNA glycosylase superfamily protein pseudogene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3359 CH63_336 CH63_336 araB araB 357336 359039 + ribulokinase L-ribulokinase: ribulokinase~[C] COG1069 Ribulose kinase gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_336 CH63_3361 CH63_3361 grcA grcA 3687288 3687671 + autonomous glycyl radical cofactor GrcA spare_glycyl: autonomous glycyl radical cofactor GrcA~[R] COG3445 Acid-induced glycyl radical enzyme gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3361 CH63_3362 CH63_3362 phlA phlA 3687850 3688812 + extracellular phospholipase A1 gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3362 CH63_3363 CH63_3363 CH63_3363 3688805 3688903 + hypothetical protein conserved hypothetical protein gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3363 CH63_3364 CH63_3364 CH63_3364 3688890 3689546 + ankyrin repeat family protein [R] COG0666 FOG: Ankyrin repeat gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3364 CH63_3365 CH63_3365 CH63_3365 3689500 3689649 + hypothetical protein conserved hypothetical protein gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3365 CH63_3366 CH63_3366 CH63_3366 3689677 3691002 - DEAD/DEAH box helicase family protein [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3366 CH63_3367 CH63_3367 CH63_3367 3691245 3692000 + methyltransferase small domain protein [R] COG4123 Predicted O-methyltransferase gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3367 CH63_3368 CH63_3368 nadB nadB 3692283 3693884 - L-aspartate oxidase nadB: L-aspartate oxidase~[H] COG0029 Aspartate oxidase gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3368 CH63_3369 CH63_3369 rpoE rpoE 3694108 3694683 + RNA polymerase sigma factor RpoE rpoE_Sigma70: RNA polymerase sigma factor RpoE~[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3369 CH63_337 CH63_337 CH63_337 359123 360625 + L-arabinose isomerase family protein [G] COG2160 L-arabinose isomerase gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_337 CH63_3370 CH63_3370 CH63_3370 3694709 3695365 + hypothetical protein anti sigma-E RseA%2C N-terminal domain protein~[T] COG3073 Negative regulator of sigma E activity gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3370 CH63_3371 CH63_3371 CH63_3371 3695365 3696321 + mucB/RseB family protein [T] COG3026 Negative regulator of sigma E activity gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3371 CH63_3372 CH63_3372 CH63_3372 3696318 3696773 + positive regulator of sigma(E)%2C RseC/MucC family protein [T] COG3086 Positive regulator of sigma E activity gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3372 CH63_3373 CH63_3373 CH63_3373 3696794 3697648 - putative membrane protein gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3373 CH63_3374 CH63_3374 lepA lepA 3698148 3699947 + elongation factor 4 lepA: elongation factor 4~[M] COG0481 Membrane GTPase LepA gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3374 CH63_3375 CH63_3375 lepB lepB 3699957 3700955 + signal peptidase I sigpep_I_bact: signal peptidase I~[U] COG0681 Signal peptidase I gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3375 CH63_3376 CH63_3376 rnc rnc 3701307 3701987 + ribonuclease III RNaseIII: ribonuclease III~[K] COG0571 dsRNA-specific ribonuclease gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3376 CH63_3377 CH63_3377 era era 3701984 3702895 + GTP-binding protein Era era: GTP-binding protein Era~[R] COG1159 GTPase gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3377 CH63_3378 CH63_3378 recO recO 3702905 3703630 + DNA repair protein RecO reco: DNA repair protein RecO~[L] COG1381 Recombinational DNA repair protein (RecF pathway) gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3378 CH63_3379 CH63_3379 pdxJ pdxJ 3703789 3704520 + pyridoxine 5'-phosphate synthase pdxJ: pyridoxine 5'-phosphate synthase~[H] COG0854 Pyridoxal phosphate biosynthesis protein gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3379 CH63_338 CH63_338 CH63_338 360625 360759 + hypothetical protein conserved hypothetical protein gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_338 CH63_3380 CH63_3380 acpS acpS 3704520 3704900 + holo-[acyl-carrier-protein] synthase acpS: holo-[acyl-carrier-protein] synthase~[I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3380 CH63_3381 CH63_3381 CH63_3381 3705102 3705560 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3381 CH63_3382 CH63_3382 CH63_3382 3705716 3705976 - hypothetical protein conserved hypothetical protein~[C] COG1145 Ferredoxin gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3382 CH63_3383 CH63_3383 CH63_3383 3706138 3706977 - SIS domain protein [K] COG1737 Transcriptional regulators gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3383 CH63_3384 CH63_3384 CH63_3384 3707185 3708071 + putative n-acetylmuramic acid 6-phosphate etherase%3BSIS domain protein pseudogene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3384 CH63_3386 CH63_3386 CH63_3386 3708298 3708993 + haloacid dehalogenase-like hydrolase family protein [E] COG0560 Phosphoserine phosphatase gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3386 CH63_3387 CH63_3387 CH63_3387 3709121 3709666 + cytidine and deoxycytidylate deaminase zinc-binding region family protein [FJ] COG0590 Cytosine/adenosine deaminases gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3387 CH63_3388 CH63_3388 CH63_3388 3709775 3711235 - bacterial extracellular solute-binding s%2C 3 family protein [M] COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3388 CH63_3389 CH63_3389 purL purL 3711551 3715441 + phosphoribosylformylglycinamidine synthase FGAM_synt: phosphoribosylformylglycinamidine synthase~[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase%2C synthetase domain gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3389 CH63_339 CH63_339 CH63_339 360815 362953 - type I secretion system ATPase family protein type_I_sec_HlyB: type I secretion system ATPase family protein~[V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_339 CH63_3390 CH63_3390 CH63_3390 3715853 3716302 - hypothetical protein conserved hypothetical protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3390 CH63_3391 CH63_3391 CH63_3391 3716754 3717314 - putative exported protein gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3391 CH63_3392 CH63_3392 CH63_3392 3718327 3718551 + hypothetical protein conserved hypothetical protein gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3392 CH63_3393 CH63_3393 CH63_3393 3718541 3718999 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3393 CH63_3394 CH63_3394 CH63_3394 3719220 3720656 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3394 CH63_3395 CH63_3395 CH63_3395 3720660 3721727 + yfhG lipofamily protein gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3395 CH63_3396 CH63_3396 CH63_3396 3721690 3723027 + AAA domain family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3396 CH63_3397 CH63_3397 nadE nadE 3723187 3724809 + NAD+ synthetase nadE: NAD+ synthetase~[H] COG0171 NAD synthase gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3397 CH63_3398 CH63_3398 glnB glnB 3724824 3725162 + nitrogen regulatory protein P-II [E] COG0347 Nitrogen regulatory protein PII gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3398 CH63_3399 CH63_3399 CH63_3399 3725331 3726230 - hypothetical protein yhfZ C-terminal domain protein gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3399 CH63_34 CH63_34 CH63_34 31728 32426 - D12 class N6 adenine-specific DNA methyltransferase family protein [L] COG0338 Site-specific DNA methylase gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_34 CH63_340 CH63_340 CH63_340 362955 363323 - hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_340 CH63_3400 CH63_3400 CH63_3400 3726694 3727884 - globin family protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3400 CH63_3401 CH63_3401 CH63_3401 3728425 3729678 + beta-eliminating lyase family protein [E] COG0112 Glycine/serine hydroxymethyltransferase gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3401 CH63_3402 CH63_3402 ail ail 3730131 3730670 + attachment invasion locus protein [M] COG3637 Opacity protein and related surface antigens gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3402 CH63_3403 CH63_3403 CH63_3403 3732176 3733552 - PRD domain protein [K] COG3711 Transcriptional antiterminator gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3403 CH63_3404 CH63_3404 CH63_3404 3731022 3732179 + lacY proton/sugar symporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3404 CH63_3405 CH63_3405 CH63_3405 3733703 3734368 + hypothetical protein conserved hypothetical protein~[R] COG3683 ABC-type uncharacterized transport system%2C periplasmic component gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3405 CH63_3406 CH63_3406 CH63_3406 3734359 3735381 + high-affinity nickel-transport family protein [R] COG2215 ABC-type uncharacterized transport system%2C permease component gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3406 CH63_3407 CH63_3407 CH63_3407 3735527 3735985 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3407 CH63_3408 CH63_3408 suhB suhB 3736190 3736993 - inositol-1-monophosphatase [G] COG0483 Archaeal fructose-1%2C6-bisphosphatase and related enzymes of inositol monophosphatase family gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3408 CH63_3409 CH63_3409 CH63_3409 3737112 3737885 + RNA methyltransferase%2C TrmH%2C group 1 family protein rRNA_methyl_1: RNA methyltransferase%2C TrmH%2C group 1 family protein~[J] COG0565 rRNA methylase gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3409 CH63_341 CH63_341 CH63_341 363323 364324 - hlyD secretion family protein [M] COG0845 Membrane-fusion protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_341 CH63_3410 CH63_3410 iscR iscR 3738041 3738535 + iron-sulfur cluster assembly transcription factor IscR iscR: iron-sulfur cluster assembly transcription factor IscR~[K] COG1959 Predicted transcriptional regulator gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3410 CH63_3411 CH63_3411 iscS iscS 3738589 3739818 + cysteine desulfurase IscS iscS: cysteine desulfurase IscS~[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3411 CH63_3412 CH63_3412 nifU nifU 3739849 3740235 + nifU-like protein [C] COG0822 NifU homolog involved in Fe-S cluster formation gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3412 CH63_3413 CH63_3413 iscA iscA 3740505 3740828 + iron-sulfur cluster assembly protein IscA iscA: iron-sulfur cluster assembly protein IscA~[S] COG0316 Uncharacterized conserved protein gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3413 CH63_3414 CH63_3414 hscB hscB 3740939 3741463 + Fe-S protein assembly co-chaperone HscB hscB: Fe-S protein assembly co-chaperone HscB~[O] COG1076 DnaJ-domain-containing proteins 1 gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3414 CH63_3415 CH63_3415 hscA hscA 3741706 3743658 + Fe-S protein assembly chaperone HscA hscA: Fe-S protein assembly chaperone HscA~[O] COG0443 Molecular chaperone gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3415 CH63_3416 CH63_3416 fdx fdx 3743661 3743996 + ferredoxin%2C 2Fe-2S type%2C ISC system fdx_isc: ferredoxin%2C 2Fe-2S type%2C ISC system~[C] COG0633 Ferredoxin gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3416 CH63_3417 CH63_3417 iscX iscX 3744026 3744226 + FeS assembly protein IscX iscX_yfhJ: FeS assembly protein IscX~[S] COG2975 Uncharacterized protein conserved in bacteria gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3417 CH63_3418 CH63_3418 CH63_3418 3744366 3745664 + peptidase family protein [E] COG0260 Leucyl aminopeptidase gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3418 CH63_3419 CH63_3419 CH63_3419 3745743 3746696 + hypothetical protein sseB C-terminal domain protein gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3419 CH63_342 CH63_342 CH63_342 364623 366407 - ABC transporter family protein [V] COG2274 ABC-type bacteriocin/lantibiotic exporters%2C contain an N-terminal double-glycine peptidase domain gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_342 CH63_3420 CH63_3420 CH63_3420 3747034 3747354 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3420 CH63_3421 CH63_3421 CH63_3421 3747320 3750316 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3421 CH63_3422 CH63_3422 CH63_3422 3750874 3754521 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3422 CH63_3423 CH63_3423 CH63_3423 3754563 3755249 - hypothetical protein conserved hypothetical protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3423 CH63_3424 CH63_3424 CH63_3424 3755965 3758385 + beta/Gamma crystallin family protein gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3424 CH63_3425 CH63_3425 CH63_3425 3758712 3759140 + nucleoside diphosphate kinase family protein [F] COG0105 Nucleoside diphosphate kinase gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3425 CH63_3426 CH63_3426 rlmN rlmN 3759402 3760598 + 23S rRNA (adenine(2503)-C(2))-methyltransferase rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase~[R] COG0820 Predicted Fe-S-cluster redox enzyme gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3426 CH63_3427 CH63_3427 pilF pilF 3760752 3761501 + type IV pilus biogenesis/stability protein PilW type_IV_pilW: type IV pilus biogenesis/stability protein PilW~[NU] COG3063 Tfp pilus assembly protein PilF gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3427 CH63_3428 CH63_3428 CH63_3428 3761491 3762528 + helix-turn-helix family protein [S] COG1426 Uncharacterized protein conserved in bacteria gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3428 CH63_3429 CH63_3429 ispG ispG 3762590 3763717 + 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~[I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3429 CH63_343 CH63_343 CH63_343 366882 367325 + hypothetical protein conserved hypothetical protein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_343 CH63_3430 CH63_3430 hisS hisS 3763926 3765200 + histidine--tRNA ligase hisS: histidine--tRNA ligase~[J] COG0124 Histidyl-tRNA synthetase gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3430 CH63_3431 CH63_3431 CH63_3431 3765214 3765849 + tetratricopeptide repeat family protein [S] COG2976 Uncharacterized protein conserved in bacteria gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3431 CH63_3432 CH63_3432 yfgL yfgL 3765861 3767042 + outer membrane assembly lipoprotein YfgL assembly_YfgL: outer membrane assembly lipoprotein YfgL~[S] COG1520 FOG: WD40-like repeat gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3432 CH63_3433 CH63_3433 engA engA 3767190 3768677 + ribosome-associated GTPase EngA GTPase_EngA: ribosome-associated GTPase EngA~[R] COG1160 Predicted GTPases gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3433 CH63_3434 CH63_3434 CH63_3434 3769024 3769980 + membrane transport family protein [R] COG0679 Predicted permeases gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3434 CH63_3435 CH63_3435 CH63_3435 3770029 3770253 + zinc-ribbons family protein gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3435 CH63_3436 CH63_3436 xseA xseA 3770386 3771765 - exodeoxyribonuclease VII%2C large subunit xseA: exodeoxyribonuclease VII%2C large subunit~[L] COG1570 Exonuclease VII%2C large subunit gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3436 CH63_3437 CH63_3437 guaB guaB 3771935 3773398 + inosine-5'-monophosphate dehydrogenase IMP_dehydrog: inosine-5'-monophosphate dehydrogenase~[F] COG0516 IMP dehydrogenase/GMP reductase gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3437 CH63_3438 CH63_3438 guaA guaA 3773578 3775155 + GMP synthase guaA_Nterm: GMP synthase (glutamine-hydrolyzing)%2C N-terminal domain~[F] COG0519 GMP synthase%2C PP-ATPase domain/subunit gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3438 CH63_3439 CH63_3439 CH63_3439 3775530 3775988 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3439 CH63_344 CH63_344 CH63_344 367453 368034 + electron transport complex%2C RnfABCDGE type%2C A subunit rnfA: electron transport complex%2C RnfABCDGE type%2C A subunit~[C] COG4657 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfA gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_344 CH63_3440 CH63_3440 CH63_3440 3776148 3776627 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3440 CH63_3441 CH63_3441 CH63_3441 3776920 3777108 + putative membrane protein gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3441 CH63_3442 CH63_3442 CH63_3442 3777120 3777515 - hypothetical protein conserved hypothetical protein gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3442 CH63_3443 CH63_3443 CH63_3443 3777577 3777972 - hypothetical protein conserved hypothetical protein gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3443 CH63_3444 CH63_3444 CH63_3444 3778036 3778431 - hypothetical protein conserved hypothetical protein gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3444 CH63_3445 CH63_3445 CH63_3445 3778428 3779072 - putative membrane protein gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3445 CH63_3446 CH63_3446 CH63_3446 3779154 3780362 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3446 CH63_3447 CH63_3447 CH63_3447 3780962 3781963 + hypothetical protein conserved hypothetical protein~[LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3447 CH63_3448 CH63_3448 CH63_3448 3782174 3782632 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3448 CH63_3449 CH63_3449 CH63_3449 3783047 3783976 + hypothetical protein conserved hypothetical protein~[S] COG3595 Uncharacterized conserved protein gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3449 CH63_345 CH63_345 CH63_345 368034 368600 + electron transport complex%2C RnfABCDGE type%2C B subunit rnfB: electron transport complex%2C RnfABCDGE type%2C B subunit~[C] COG2878 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfB gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_345 CH63_3450 CH63_3450 CH63_3450 3784276 3785214 + dihydrouridine synthase family protein [J] COG0042 tRNA-dihydrouridine synthase gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3450 CH63_3451 CH63_3451 CH63_3451 3785288 3785467 - putative membrane protein gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3451 CH63_3452 CH63_3452 CH63_3452 3785806 3786741 + D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3452 CH63_3453 CH63_3453 CH63_3453 3786862 3788574 - FAD binding domain protein [C] COG0277 FAD/FMN-containing dehydrogenases gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3453 CH63_3454 CH63_3454 cyaB cyaB 3788784 3789323 + adenylate cyclase 2 [F] COG1437 Adenylate cyclase%2C class 2 (thermophilic) gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3454 CH63_3455 CH63_3455 CH63_3455 3789381 3789860 + hypothetical protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3455 CH63_3456 CH63_3456 CH63_3456 3790002 3791105 + suppressor of fused family protein gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3456 CH63_3457 CH63_3457 CH63_3457 3791290 3791538 + transglycosylase associated family protein [S] COG2261 Predicted membrane protein gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3457 CH63_3458 CH63_3458 phnC phnC 3791746 3792582 + phosphonate ABC transporter%2C ATP-binding protein ABC_phnC: phosphonate ABC transporter%2C ATP-binding protein~[P] COG3638 ABC-type phosphate/phosphonate transport system%2C ATPase component gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3458 CH63_3459 CH63_3459 phnD phnD 3792619 3793548 + phosphonate ABC transporter%2C periplasmic phosphonate binding protein phnD: phosphonate ABC transporter%2C periplasmic phosphonate binding protein~[P] COG3221 ABC-type phosphate/phosphonate transport system%2C periplasmic component gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3459 CH63_346 CH63_346 CH63_346 368650 370629 + electron transport complex%2C RnfABCDGE type%2C C subunit rnfC: electron transport complex%2C RnfABCDGE type%2C C subunit~[C] COG4656 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfC gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_346 CH63_3460 CH63_3460 phnE phnE 3793651 3794511 + phosphonate ABC transporter%2C permease protein PhnE phnE: phosphonate ABC transporter%2C permease protein PhnE~[P] COG3639 ABC-type phosphate/phosphonate transport system%2C permease component gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3460 CH63_3461 CH63_3461 CH63_3461 3794514 3795395 + phnE%3Bputative phosphonate ABC transporter%2C inner membrane subunit%3Bphosphonate ABC transporter%2C permease protein PhnE pseudogene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3461 CH63_3463 CH63_3463 CH63_3463 3795641 3796114 + hypothetical protein conserved hypothetical protein~[S] COG4807 Uncharacterized protein conserved in bacteria gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3463 CH63_3464 CH63_3464 CH63_3464 3796556 3797824 + periplasmic binding domain protein [E] COG0683 ABC-type branched-chain amino acid transport systems%2C periplasmic component gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3464 CH63_3465 CH63_3465 urtB urtB 3798002 3799549 + urea ABC transporter%2C permease protein UrtB urea_trans_UrtB: urea ABC transporter%2C permease protein UrtB~[E] COG0559 Branched-chain amino acid ABC-type transport system%2C permease components gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3465 CH63_3466 CH63_3466 urtC urtC 3799549 3801459 + urea ABC transporter%2C permease protein UrtC urea_trans_UrtC: urea ABC transporter%2C permease protein UrtC~[R] COG4674 Uncharacterized ABC-type transport system%2C ATPase component gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3466 CH63_3467 CH63_3467 urtE urtE 3801553 3802251 + urea ABC transporter%2C ATP-binding protein UrtE urea_trans_UrtE: urea ABC transporter%2C ATP-binding protein UrtE~[E] COG0410 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3467 CH63_3468 CH63_3468 CH63_3468 3802366 3803223 + hypothetical protein conserved hypothetical protein gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3468 CH63_3469 CH63_3469 CH63_3469 3803247 3804662 + beta-eliminating lyase family protein [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3469 CH63_347 CH63_347 CH63_347 370734 371627 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_347 CH63_3470 CH63_3470 CH63_3470 3804943 3805797 - rhodanese-like domain protein [P] COG2897 Rhodanese-related sulfurtransferase gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3470 CH63_3471 CH63_3471 CH63_3471 3806533 3807465 + substrate binding domain of ABC-type glycine betaine transport system family protein pseudogene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3471 CH63_3473 CH63_3473 CH63_3473 3807726 3808880 + binding--dependent transport system inner membrane component family protein [E] COG1174 ABC-type proline/glycine betaine transport systems%2C permease component gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3473 CH63_3474 CH63_3474 CH63_3474 3808877 3809815 + ABC transporter family protein [E] COG1125 ABC-type proline/glycine betaine transport systems%2C ATPase components gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3474 CH63_3475 CH63_3475 CH63_3475 3809812 3810648 + binding--dependent transport system inner membrane component family protein [E] COG1174 ABC-type proline/glycine betaine transport systems%2C permease component gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3475 CH63_3476 CH63_3476 adiC adiC 3811114 3812448 + arginine/agmatine antiporter [E] COG0531 Amino acid transporters gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3476 CH63_3477 CH63_3477 adiA adiA 3812518 3814824 + biodegradative arginine decarboxylase [E] COG1982 Arginine/lysine/ornithine decarboxylases gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3477 CH63_3478 CH63_3478 CH63_3478 3814942 3815145 - hypothetical protein conserved hypothetical protein gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3478 CH63_3479 CH63_3479 CH63_3479 3815270 3816160 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3479 CH63_348 CH63_348 CH63_348 372116 373210 + electron transport complex%2C RnfABCDGE type%2C D subunit rnfD: electron transport complex%2C RnfABCDGE type%2C D subunit~[C] COG4658 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfD gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_348 CH63_3480 CH63_3480 CH63_3480 3816572 3817687 - gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3480 CH63_3481 CH63_3481 CH63_3481 3817957 3820134 + DEAD_2 family protein [KL] COG1199 Rad3-related DNA helicases gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3481 CH63_3482 CH63_3482 katA katA 3820202 3821641 - catalase [P] COG0753 Catalase gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3482 CH63_3483 CH63_3483 CH63_3483 3822002 3822544 + yfaZ family protein gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3483 CH63_3484 CH63_3484 CH63_3484 3822801 3824009 - aromatic amino acid transport family protein araaP: aromatic amino acid transport family protein~[E] COG0814 Amino acid permeases gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3484 CH63_3485 CH63_3485 CH63_3485 3824628 3825821 + molybdenum cofactor synthesis domain protein molyb_syn: molybdenum cofactor synthesis domain protein~[R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3485 CH63_3486 CH63_3486 CH63_3486 3825879 3826388 - ecotin family protein [R] COG4574 Serine protease inhibitor ecotin gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3486 CH63_3487 CH63_3487 CH63_3487 3826423 3826680 - 2Fe-2S iron-sulfur cluster binding domain protein [C] COG0633 Ferredoxin gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3487 CH63_3488 CH63_3488 CH63_3488 3826684 3827814 - ribonucleotide reductase%2C small chain family protein [F] COG0208 Ribonucleotide reductase%2C beta subunit gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3488 CH63_3489 CH63_3489 CH63_3489 3827977 3830265 - ribonucleoside-diphosphate reductase%2C alpha subunit nrdE_NrdA: ribonucleoside-diphosphate reductase%2C alpha subunit~[F] COG0209 Ribonucleotide reductase%2C alpha subunit gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3489 CH63_349 CH63_349 CH63_349 373220 373849 + electron transport complex%2C RnfABCDGE type%2C G subunit rnfG: electron transport complex%2C RnfABCDGE type%2C G subunit~[C] COG4659 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfG gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_349 CH63_3490 CH63_3490 ubiG ubiG 3830759 3831487 - 3-demethylubiquinone-9 3-O-methyltransferase ubiG: 3-demethylubiquinone-9 3-O-methyltransferase~[H] COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1%2C4-benzoquinol methylase gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3490 CH63_3491 CH63_3491 gyrA gyrA 3831749 3834424 + DNA gyrase%2C A subunit gyrA: DNA gyrase%2C A subunit~[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3491 CH63_3492 CH63_3492 CH63_3492 3834636 3837485 + rcsC Alpha-Beta-Loop family protein [T] COG0642 Signal transduction histidine kinase gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3492 CH63_3493 CH63_3493 rcsB rcsB 3837553 3838206 - rcsB protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3493 CH63_3494 CH63_3494 CH63_3494 3838209 3838781 - hpt domain protein [T] COG2198 FOG: HPt domain gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3494 CH63_3495 CH63_3495 CH63_3495 3838949 3840901 - histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase family protein [T] COG0642 Signal transduction histidine kinase gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3495 CH63_3496 CH63_3496 CH63_3496 3840925 3842079 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3496 CH63_3497 CH63_3497 CH63_3497 3842852 3842986 + putative membrane protein gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3497 CH63_3498 CH63_3498 ompC ompC 3843182 3844297 + outer membrane protein C [M] COG3203 Outer membrane protein (porin) gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3498 CH63_3499 CH63_3499 CH63_3499 3844499 3844957 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3499 CH63_35 CH63_35 ninB ninB 32453 32899 + protein ninB gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_35 CH63_350 CH63_350 CH63_350 373846 374547 + electron transport complex%2C RnfABCDGE type%2C E subunit rnfE: electron transport complex%2C RnfABCDGE type%2C E subunit~[C] COG4660 Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfE gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_350 CH63_3500 CH63_3500 CH63_3500 3845391 3845478 + tRNA-Ser tRNA gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3500 CH63_3501 CH63_3501 CH63_3501 3845484 3845559 + tRNA-Thr tRNA gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3501 CH63_3502 CH63_3502 CH63_3502 3845747 3846913 - putative enzyme [V] COG1680 Beta-lactamase class C and other penicillin binding proteins gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3502 CH63_3503 CH63_3503 CH63_3503 3847188 3848714 - MFS/sugar transport family protein [G] COG2211 Na+/melibiose symporter and related transporters gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3503 CH63_3504 CH63_3504 CH63_3504 3849130 3850119 + beta-lactamase superfamily domain protein [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3504 CH63_3505 CH63_3505 CH63_3505 3850193 3851980 - methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3505 CH63_3506 CH63_3506 pla pla 3852402 3853337 - coagulase/fibrinolysin [M] COG4571 Outer membrane protease gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3506 CH63_3507 CH63_3507 CH63_3507 3853509 3853751 - dinI-like family protein gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3507 CH63_3508 CH63_3508 ci ci 3853957 3854679 - repressor protein CI [KT] COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3508 CH63_3509 CH63_3509 CH63_3509 3855007 3855432 + phage antitermination Q family protein gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3509 CH63_351 CH63_351 nth nth 374544 375185 + endonuclease III nth: endonuclease III~[L] COG0177 Predicted EndoIII-related endonuclease gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_351 CH63_3510 CH63_3510 CH63_3510 3855643 3856947 + hypothetical protein conserved hypothetical protein~[S] COG3395 Uncharacterized protein conserved in bacteria gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3510 CH63_3511 CH63_3511 CH63_3511 3856944 3857573 + hypothetical protein class II Aldolase and Adducin N-terminal domain protein~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3511 CH63_3512 CH63_3512 CH63_3512 3857659 3858468 + deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3512 CH63_3513 CH63_3513 CH63_3513 3858444 3859238 + xylose isomerase-like TIM barrel family protein [G] COG3622 Hydroxypyruvate isomerase gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3513 CH63_3514 CH63_3514 CH63_3514 3859869 3860159 + putative bacteriophage protein gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3514 CH63_3515 CH63_3515 CH63_3515 3860205 3860822 + putative bacteriophage ATP-binding protein gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3515 CH63_3516 CH63_3516 CH63_3516 3860827 3861021 + hypothetical protein conserved hypothetical protein gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3516 CH63_3517 CH63_3517 CH63_3517 3861018 3862322 + phage tail sheath family protein [R] COG4386 Mu-like prophage tail sheath protein gpL gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3517 CH63_3518 CH63_3518 CH63_3518 3862319 3862525 + hypothetical protein conserved hypothetical protein~[R] COG4386 Mu-like prophage tail sheath protein gpL gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3518 CH63_3519 CH63_3519 CH63_3519 3862547 3862915 + phage tail tube family protein gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3519 CH63_352 CH63_352 CH63_352 375368 376366 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_352 CH63_3520 CH63_3520 CH63_3520 3862917 3863216 + mu-like prophage FluMu gp41 family protein gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3520 CH63_3521 CH63_3521 CH63_3521 3863337 3864830 + putative bacteriophage coat protein gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3521 CH63_3522 CH63_3522 CH63_3522 3865097 3866503 + DNA circularization family protein [R] COG4228 Mu-like prophage DNA circulation protein gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3522 CH63_3523 CH63_3523 CH63_3523 3866500 3867555 + phage late control D family protein [R] COG4379 Mu-like prophage tail protein gpP gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3523 CH63_3524 CH63_3524 CH63_3524 3867571 3868167 + bacteriophage Mu Gp45 family protein [S] COG4384 Mu-like prophage protein gp45 gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3524 CH63_3525 CH63_3525 CH63_3525 3868164 3868619 + phage GP46 family protein [S] COG4381 Mu-like prophage protein gp46 gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3525 CH63_3526 CH63_3526 CH63_3526 3868623 3869759 + baseplate J-like family protein [S] COG3299 Uncharacterized homolog of phage Mu protein gp47 gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3526 CH63_3527 CH63_3527 CH63_3527 3869756 3870016 + hypothetical protein conserved hypothetical protein gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3527 CH63_3528 CH63_3528 CH63_3528 3870013 3870360 + hypothetical protein conserved hypothetical protein~[S] COG3778 Uncharacterized protein conserved in bacteria gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3528 CH63_3529 CH63_3529 CH63_3529 3870748 3871236 + phage Tail Collar domain protein gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3529 CH63_353 CH63_353 CH63_353 376404 377714 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_353 CH63_3530 CH63_3530 CH63_3530 3871534 3872274 + SIS domain protein [K] COG1737 Transcriptional regulators gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3530 CH63_3531 CH63_3531 CH63_3531 3872443 3872568 + hypothetical protein conserved hypothetical protein gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3531 CH63_3532 CH63_3532 CH63_3532 3872565 3874001 + glycosyl hydrolase 1 family protein [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3532 CH63_3533 CH63_3533 CH63_3533 3874127 3874489 - hypothetical protein conserved hypothetical protein gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3533 CH63_3534 CH63_3534 CH63_3534 3874826 3874918 - hypothetical protein conserved hypothetical protein~[L] COG3728 Phage terminase%2C small subunit gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3534 CH63_3535 CH63_3535 CH63_3535 3875189 3875677 - hypothetical protein conserved hypothetical protein gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3535 CH63_3536 CH63_3536 CH63_3536 3875690 3876838 - DNase/tRNase domain of colicin-like bacteriocin family protein gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3536 CH63_3537 CH63_3537 CH63_3537 3877195 3877578 - hypothetical protein conserved hypothetical protein~[L] COG5519 Superfamily II helicase and inactivated derivatives gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3537 CH63_3538 CH63_3538 CH63_3538 3877628 3877704 - tRNA-Pro tRNA gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3538 CH63_3539 CH63_3539 CH63_3539 3877809 3879605 - type I phosphodiesterase / nucleotide pyrophosphatase family protein [R] COG3083 Predicted hydrolase of alkaline phosphatase superfamily gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3539 CH63_354 CH63_354 rnb rnb 378383 380317 + exoribonuclease II RNase_B: exoribonuclease II~[K] COG4776 Exoribonuclease II gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_354 CH63_3540 CH63_3540 CH63_3540 3879633 3879860 - hypothetical protein conserved hypothetical protein~[S] COG3082 Uncharacterized protein conserved in bacteria gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3540 CH63_3541 CH63_3541 CH63_3541 3880038 3881042 + 37-kD nucleoid-associated bacterial family protein [R] COG3081 Nucleoid-associated protein gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3541 CH63_3542 CH63_3542 CH63_3542 3881243 3881701 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3542 CH63_3543 CH63_3543 CH63_3543 3881840 3882124 - ribosomal L25p family protein [J] COG1825 Ribosomal protein L25 (general stress protein Ctc) gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3543 CH63_3544 CH63_3544 CH63_3544 3882286 3884043 - DEAD/DEAH box helicase family protein [KL] COG1061 DNA or RNA helicases of superfamily II gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3544 CH63_3545 CH63_3545 rsuA rsuA 3884557 3885264 + ribosomal small subunit pseudouridine synthase A [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3545 CH63_3546 CH63_3546 CH63_3546 3885368 3886567 + drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3546 CH63_3547 CH63_3547 CH63_3547 3887534 3887878 + yejG-like family protein gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3547 CH63_3548 CH63_3548 nikE nikE 3887939 3889531 - nickel import ATP-binding protein NikE nickel_nikE: nickel import ATP-binding protein NikE~[R] COG4172 ABC-type uncharacterized transport system%2C duplicated ATPase component gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3548 CH63_3549 CH63_3549 yejE yejE 3889533 3890558 - inner membrane ABC transporter permease protein yejE [R] COG4239 ABC-type uncharacterized transport system%2C permease component gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3549 CH63_355 CH63_355 CH63_355 380667 382733 + carbon starvation CstA family protein [T] COG1966 Carbon starvation protein%2C predicted membrane protein gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_355 CH63_3550 CH63_3550 yejB yejB 3890561 3891661 - inner membrane ABC transporter permease protein yejB [R] COG4174 ABC-type uncharacterized transport system%2C permease component gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3550 CH63_3551 CH63_3551 CH63_3551 3891671 3893479 - bacterial extracellular solute-binding s%2C 5 Middle family protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3551 CH63_3552 CH63_3552 CH63_3552 3893561 3894934 - EAL domain protein [T] COG2200 FOG: EAL domain gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3552 CH63_3553 CH63_3553 rtn rtn 3895008 3895142 - rtn domain protein gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3553 CH63_3554 CH63_3554 CH63_3554 3895729 3896313 - nlpC/P60 family protein [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3554 CH63_3555 CH63_3555 CH63_3555 3896755 3897456 - PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3555 CH63_3556 CH63_3556 CH63_3556 3897515 3898498 - cobW/HypB/UreG%2C nucleotide-binding domain protein [R] COG0523 Putative GTPases (G3E family) gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3556 CH63_3557 CH63_3557 CH63_3557 3898814 3899140 + putative membrane protein gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3557 CH63_3558 CH63_3558 CH63_3558 3899306 3900049 + bacterial regulatory s%2C gntR family protein [K] COG2186 Transcriptional regulators gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3558 CH63_3559 CH63_3559 CH63_3559 3900193 3901665 - mannitol dehydrogenase Rossmann domain protein [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3559 CH63_356 CH63_356 CH63_356 382726 383031 + hypothetical protein conserved hypothetical protein~[S] COG2879 Uncharacterized small protein gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_356 CH63_3560 CH63_3560 uxuA uxuA 3902250 3903443 + mannonate dehydratase uxuA: mannonate dehydratase~[G] COG1312 D-mannonate dehydratase gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3560 CH63_3561 CH63_3561 yeiP yeiP 3903583 3904155 - elongation factor P-like protein [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3561 CH63_3562 CH63_3562 CH63_3562 3904259 3905503 - aromatic amino acid transport family protein araaP: aromatic amino acid transport family protein~[E] COG0814 Amino acid permeases gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3562 CH63_3563 CH63_3563 CH63_3563 3905878 3906132 + putative zinc-/iron-chelating domain protein [R] COG0727 Predicted Fe-S-cluster oxidoreductase gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3563 CH63_3564 CH63_3564 CH63_3564 3906201 3907016 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3564 CH63_3565 CH63_3565 CH63_3565 3907027 3907977 - D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3565 CH63_3566 CH63_3566 CH63_3566 3907989 3909131 - fumarylacetoacetate (FAA) hydrolase family protein [R] COG3970 Fumarylacetoacetate (FAA) hydrolase family protein gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3566 CH63_3567 CH63_3567 CH63_3567 3909483 3910979 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3567 CH63_3568 CH63_3568 xylB xylB 3910983 3912536 + xylulokinase xylB: xylulokinase~[G] COG1070 Sugar (pentulose and hexulose) kinases gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3568 CH63_3569 CH63_3569 rpiA rpiA 3912556 3913266 + ribose 5-phosphate isomerase A rpiA: ribose 5-phosphate isomerase A~[G] COG0120 Ribose 5-phosphate isomerase gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3569 CH63_357 CH63_357 fsa fsa 383148 383813 - fructose-6-phosphate aldolase fsa_talC_mipB: fructose-6-phosphate aldolase~[G] COG0176 Transaldolase gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_357 CH63_3570 CH63_3570 CH63_3570 3913390 3914478 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3570 CH63_3571 CH63_3571 CH63_3571 3914587 3916161 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3571 CH63_3572 CH63_3572 CH63_3572 3916197 3917195 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3572 CH63_3573 CH63_3573 CH63_3573 3917308 3917763 - NUDIX domain protein [F] COG1051 ADP-ribose pyrophosphatase gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3573 CH63_3574 CH63_3574 CH63_3574 3918025 3919158 + phosphocarrier%2C HPr family protein PTS_HPr_: phosphocarrier%2C HPr family protein~[G] COG4668 Mannitol/fructose-specific phosphotransferase system%2C IIA domain gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3574 CH63_3575 CH63_3575 pfkB pfkB 3919155 3920093 + 1-phosphofructokinase pfkB: 1-phosphofructokinase~[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3575 CH63_3576 CH63_3576 CH63_3576 3920108 3921809 + PTS system%2C Fru family%2C IIB component domain protein%3BPTS system%2C Fru family%2C IIC component domain protein pseudogene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3576 CH63_3578 CH63_3578 CH63_3578 3922134 3922778 + hypothetical protein transcriptional regulatory%2C C terminal family protein~[K] COG3710 DNA-binding winged-HTH domains gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3578 CH63_3579 CH63_3579 CH63_3579 3922775 3923263 + putative protein psaF gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3579 CH63_358 CH63_358 CH63_358 384147 384395 + hypothetical protein conserved hypothetical protein~[S] COG5460 Uncharacterized conserved protein gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_358 CH63_3580 CH63_3580 myfA myfA 3923808 3924284 + fimbrial protein myfA gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3580 CH63_3581 CH63_3581 CH63_3581 3924606 3925232 + hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3581 CH63_3582 CH63_3582 CH63_3582 3925334 3927787 + hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3582 CH63_3583 CH63_3583 CH63_3583 3927874 3928731 - apurinic endonuclease family protein nfo: apurinic endonuclease family protein~[L] COG0648 Endonuclease IV gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3583 CH63_3584 CH63_3584 CH63_3584 3928895 3929983 - hypothetical protein conserved hypothetical family protein~[S] COG2855 Predicted membrane protein gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3584 CH63_3585 CH63_3585 CH63_3585 3930641 3931513 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3585 CH63_3586 CH63_3586 CH63_3586 3931515 3931661 + hypothetical protein conserved hypothetical protein gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3586 CH63_3587 CH63_3587 CH63_3587 3931771 3933281 + amino acid permease family protein pseudogene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3587 CH63_3589 CH63_3589 CH63_3589 3933567 3934712 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3589 CH63_359 CH63_359 araD araD 384424 385119 - L-ribulose-5-phosphate 4-epimerase araD: L-ribulose-5-phosphate 4-epimerase~[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_359 CH63_3590 CH63_3590 CH63_3590 3934907 3935989 + fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3590 CH63_3591 CH63_3591 CH63_3591 3935986 3936774 + ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3591 CH63_3592 CH63_3592 CH63_3592 3937034 3939031 + tonB dependent receptor family protein [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3592 CH63_3593 CH63_3593 CH63_3593 3939301 3939921 - hypothetical protein glutathione S-transferase%2C N-terminal domain protein~[O] COG0625 Glutathione S-transferase gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3593 CH63_3594 CH63_3594 CH63_3594 3940084 3940734 - HAD phosphoserine phosphatase-like hydrolase%2C IB family protein HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase%2C IB family protein~[E] COG0560 Phosphoserine phosphatase gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3594 CH63_3595 CH63_3595 CH63_3595 3941136 3941258 + hypothetical protein conserved hypothetical protein gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3595 CH63_3596 CH63_3596 CH63_3596 3941221 3942288 + 2OG-Fe(II) oxygenase superfamily protein [R] COG3491 Isopenicillin N synthase and related dioxygenases gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3596 CH63_3597 CH63_3597 CH63_3597 3942516 3943340 + NLPA lipofamily protein [P] COG1464 ABC-type metal ion transport system%2C periplasmic component/surface antigen gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3597 CH63_3598 CH63_3598 CH63_3598 3943337 3944323 + ABC transporter family protein [P] COG1135 ABC-type metal ion transport system%2C ATPase component gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3598 CH63_3599 CH63_3599 CH63_3599 3944320 3944991 + binding--dependent transport system inner membrane component family protein [P] COG2011 ABC-type metal ion transport system%2C permease component gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3599 CH63_36 CH63_36 CH63_36 32973 33578 + bacteriophage Lambda NinG family protein gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_36 CH63_360 CH63_360 CH63_360 385599 385814 + glycine zipper 2TM domain protein gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_360 CH63_3600 CH63_3600 CH63_3600 3945326 3946531 + D-alanyl-D-alanine carboxypeptidase family protein [M] COG1686 D-alanyl-D-alanine carboxypeptidase gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3600 CH63_3601 CH63_3601 CH63_3601 3946971 3948272 - putative membrane protein%3Btryptophan/tyrosine permease family protein pseudogene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3601 CH63_3603 CH63_3603 CH63_3603 3949372 3950136 - deoR-like helix-turn-helix domain protein [KG] COG1349 Transcriptional regulators of sugar metabolism gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3603 CH63_3604 CH63_3604 deoC deoC 3950366 3951037 - deoxyribose-phosphate aldolase deoC: deoxyribose-phosphate aldolase~[F] COG0274 Deoxyribose-phosphate aldolase gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3604 CH63_3605 CH63_3605 CH63_3605 3951295 3951900 - PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3605 CH63_3606 CH63_3606 CH63_3606 3951900 3952670 - PAP2 superfamily protein [R] COG3907 PAP2 (acid phosphatase) superfamily protein gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3606 CH63_3607 CH63_3607 CH63_3607 3953048 3954736 - AspT/YidE/YbjL antiporter duplication domain protein yidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain protein~[R] COG2985 Predicted permease gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3607 CH63_3608 CH63_3608 grxA grxA 3955146 3955409 - glutaredoxin%2C GrxA family GRXA: glutaredoxin%2C GrxA family~[O] COG0695 Glutaredoxin and related proteins gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3608 CH63_3609 CH63_3609 CH63_3609 3955872 3956186 + hypothetical protein conserved hypothetical protein gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3609 CH63_361 CH63_361 CH63_361 386052 386378 - translation initiation factor SUI1 family protein [J] COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_361 CH63_3610 CH63_3610 CH63_3610 3956328 3956813 + bacterial sensory transduction regulator family protein gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3610 CH63_3611 CH63_3611 potF potF 3957331 3958440 + putrescine-binding periplasmic protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3611 CH63_3612 CH63_3612 CH63_3612 3958611 3959744 + polyamine ABC transporter%2C ATP-binding family protein potA: polyamine ABC transporter%2C ATP-binding family protein~[E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3612 CH63_3613 CH63_3613 CH63_3613 3959769 3960734 + binding--dependent transport system inner membrane component family protein [E] COG1176 ABC-type spermidine/putrescine transport system%2C permease component I gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3613 CH63_3614 CH63_3614 CH63_3614 3960731 3961576 + binding--dependent transport system inner membrane component family protein [E] COG1177 ABC-type spermidine/putrescine transport system%2C permease component II gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3614 CH63_3615 CH63_3615 ybjO ybjO 3961701 3962165 + inner membrane protein ybjO gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3615 CH63_3616 CH63_3616 rumA rumA 3962249 3963379 + 23S rRNA (uracil-5-)-methyltransferase RumA rumA: 23S rRNA (uracil-5-)-methyltransferase RumA~[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3616 CH63_3617 CH63_3617 CH63_3617 3963506 3964237 - lysine-arginine-ornithine-binding periplasmic family protein 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein~[ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3617 CH63_3618 CH63_3618 CH63_3618 3964485 3964715 + hypothetical protein conserved hypothetical protein gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3618 CH63_3619 CH63_3619 CH63_3619 3965056 3965982 + SPFH domain / Band 7 family protein [O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3619 CH63_362 CH63_362 pyrF pyrF 386378 387115 - orotidine 5'-phosphate decarboxylase pyrF: orotidine 5'-phosphate decarboxylase~[F] COG0284 Orotidine-5'-phosphate decarboxylase gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_362 CH63_3620 CH63_3620 CH63_3620 3966394 3967485 + periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3620 CH63_3621 CH63_3621 CH63_3621 3967485 3967721 + putative iron(III) dicitrate transport system permease protein FecD gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3621 CH63_3622 CH63_3622 CH63_3622 3967675 3968541 + ABC 3 transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3622 CH63_3623 CH63_3623 CH63_3623 3968538 3969323 + ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3623 CH63_3624 CH63_3624 CH63_3624 3969311 3970108 + nicotianamine synthase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3624 CH63_3625 CH63_3625 CH63_3625 3970101 3971471 + hypothetical protein conserved hypothetical protein~[S] COG4408 Uncharacterized protein conserved in bacteria gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3625 CH63_3626 CH63_3626 CH63_3626 3971468 3972313 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3626 CH63_3627 CH63_3627 CH63_3627 3972503 3973171 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4160 ABC-type arginine/histidine transport system%2C permease component gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3627 CH63_3628 CH63_3628 CH63_3628 3973171 3973887 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4215 ABC-type arginine transport system%2C permease component gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3628 CH63_3629 CH63_3629 CH63_3629 3973899 3974630 - lysine-arginine-ornithine-binding periplasmic family protein 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein~[ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3629 CH63_363 CH63_363 CH63_363 387585 387884 + hypothetical protein conserved hypothetical protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_363 CH63_3630 CH63_3630 artP artP 3974651 3975379 - arginine transport ATP-binding protein ArtP [E] COG4161 ABC-type arginine transport system%2C ATPase component gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3630 CH63_3631 CH63_3631 CH63_3631 3975675 3976235 - putative chorismate mutase CM_mono2: putative chorismate mutase~[E] COG1605 Chorismate mutase gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3631 CH63_3632 CH63_3632 CH63_3632 3976405 3976980 - putative lipoprotein YbjP gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3632 CH63_3633 CH63_3633 CH63_3633 3977077 3978084 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3633 CH63_3634 CH63_3634 CH63_3634 3978184 3979674 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3634 CH63_3635 CH63_3635 CH63_3635 3979671 3980690 - beta-eliminating lyase family protein [E] COG2008 Threonine aldolase gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3635 CH63_3636 CH63_3636 CH63_3636 3981039 3982760 - thiamine pyrophosphate enzyme%2C central domain protein [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase%2C pyruvate dehydrogenase (cytochrome)%2C glyoxylate carboligase%2C phosphonopyruvate decarboxylase] gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3636 CH63_3637 CH63_3637 CH63_3637 3982904 3983926 - 2Fe-2S iron-sulfur cluster binding domain protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3637 CH63_3638 CH63_3638 hcp hcp 3984040 3985692 - hydroxylamine reductase hybrid_clust: hydroxylamine reductase~[C] COG1151 6Fe-6S prismane cluster-containing protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3638 CH63_3639 CH63_3639 CH63_3639 3985894 3986790 - hypothetical protein conserved hypothetical protein~[S] COG2431 Predicted membrane protein gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3639 CH63_364 CH63_364 CH63_364 388006 389175 - tetratricopeptide repeat family protein [G] COG2956 Predicted N-acetylglucosaminyl transferase gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_364 CH63_3640 CH63_3640 CH63_3640 3987143 3988810 + AAA domain protein [L] COG3593 Predicted ATP-dependent endonuclease of the OLD family gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3640 CH63_3641 CH63_3641 CH63_3641 3988947 3989894 - hypothetical protein conserved hypothetical protein~[S] COG2990 Uncharacterized protein conserved in bacteria gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3641 CH63_3642 CH63_3642 CH63_3642 3990131 3991243 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3642 CH63_3643 CH63_3643 CH63_3643 3991243 3993192 + ABC transporter family protein [V] COG0577 ABC-type antimicrobial peptide transport system%2C permease component gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3643 CH63_3644 CH63_3644 cspD cspD 3993473 3993736 - cold shock domain protein CspD cspD: cold shock domain protein CspD~[K] COG1278 Cold shock proteins gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3644 CH63_3645 CH63_3645 CH63_3645 3994097 3994417 + ATP-dependent Clp protease adaptor ClpS family protein [S] COG2127 Uncharacterized conserved protein gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3645 CH63_3646 CH63_3646 clpA clpA 3994443 3996719 + ATP-dependent Clp protease ATP-binding subunit ClpA clpA: ATP-dependent Clp protease ATP-binding subunit ClpA~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3646 CH63_3647 CH63_3647 CH63_3647 3996997 3997455 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3647 CH63_3648 CH63_3648 infA infA 3997827 3998045 - translation initiation factor IF-1 infA: translation initiation factor IF-1~[J] COG0361 Translation initiation factor 1 (IF-1) gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3648 CH63_3649 CH63_3649 aat aat 3998211 3998920 - leucyl/phenylalanyl-tRNA--protein transferase%3Bputative leucyl/phenylalanyl-tRNA--protein transferase pseudogene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3649 CH63_365 CH63_365 yciS yciS 389182 389493 - inner membrane protein yciS [S] COG3771 Predicted membrane protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_365 CH63_3651 CH63_3651 cydC cydC 3999139 4000863 - thiol reductant ABC exporter%2C CydC subunit cydC: thiol reductant ABC exporter%2C CydC subunit~[CO] COG4987 ABC-type transport system involved in cytochrome bd biosynthesis%2C fused ATPase and permease components gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3651 CH63_3652 CH63_3652 cydD cydD 4000866 4002632 - thiol reductant ABC exporter%2C CydD subunit cydD: thiol reductant ABC exporter%2C CydD subunit~[CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis%2C ATPase and permease components gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3652 CH63_3653 CH63_3653 trxB trxB 4003091 4004053 - thioredoxin-disulfide reductase TRX_reduct: thioredoxin-disulfide reductase~[O] COG0492 Thioredoxin reductase gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3653 CH63_3654 CH63_3654 lrp lrp 4004820 4005314 + leucine-responsive regulatory protein [K] COG1522 Transcriptional regulators gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3654 CH63_3655 CH63_3655 CH63_3655 4005437 4009354 + ftsK/SpoIIIE family protein [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3655 CH63_3656 CH63_3656 lolA lolA 4009547 4010155 + outer membrane lipocarrier protein LolA lolA: outer membrane lipocarrier protein LolA~[M] COG2834 Outer membrane lipoprotein-sorting protein gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3656 CH63_3657 CH63_3657 CH63_3657 4011465 4011599 - hypothetical protein conserved hypothetical protein gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3657 CH63_3658 CH63_3658 CH63_3658 4010175 4011509 + sigma-54 interaction domain protein [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3658 CH63_3659 CH63_3659 serS serS 4011751 4013043 + serine--tRNA ligase serS: serine--tRNA ligase~[J] COG0172 Seryl-tRNA synthetase gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3659 CH63_366 CH63_366 CH63_366 389662 390423 - PAP2 superfamily protein [I] COG0671 Membrane-associated phospholipid phosphatase gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_366 CH63_3660 CH63_3660 CH63_3660 4013298 4013861 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3660 CH63_3661 CH63_3661 CH63_3661 4013912 4014574 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3661 CH63_3662 CH63_3662 CH63_3662 4014585 4015004 - putative transposase Orf A%2C insertion element IS100 [L] COG4584 Transposase and inactivated derivatives gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3662 CH63_3663 CH63_3663 CH63_3663 4015024 4015713 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3663 CH63_3664 CH63_3664 CH63_3664 4015770 4016405 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3664 CH63_3665 CH63_3665 pflA pflA 4016559 4017293 - pyruvate formate-lyase 1-activating enzyme PFLA: pyruvate formate-lyase 1-activating enzyme~[O] COG1180 Pyruvate-formate lyase-activating enzyme gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3665 CH63_3666 CH63_3666 CH63_3666 4018280 4018954 + glycosyltransferase 25 family protein [M] COG3306 Glycosyltransferase involved in LPS biosynthesis gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3666 CH63_3667 CH63_3667 pflB pflB 4019072 4021354 - formate acetyltransferase pyr_form_ly_1: formate acetyltransferase~[C] COG1882 Pyruvate-formate lyase gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3667 CH63_3668 CH63_3668 focA focA 4021410 4022267 - formate transporter FocA formate_focA: formate transporter FocA~[P] COG2116 Formate/nitrite family of transporters gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3668 CH63_3669 CH63_3669 CH63_3669 4022964 4024730 - ycaO-type kinase domain protein [S] COG1944 Uncharacterized conserved protein gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3669 CH63_367 CH63_367 ribA ribA 390929 391519 + GTP cyclohydrolase-2 [H] COG0807 GTP cyclohydrolase II gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_367 CH63_3670 CH63_3670 CH63_3670 4024879 4025916 + L-asparaginase%2C type II family protein asnASE_II: L-asparaginase%2C type II family protein~[EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3670 CH63_3671 CH63_3671 CH63_3671 4026185 4027279 + coiled stalk of trimeric autotransporter adhesin family protein [UW] COG5295 Autotransporter adhesin gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3671 CH63_3672 CH63_3672 CH63_3672 4027300 4029147 + hypothetical protein yadA-like C-terminal region family protein gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3672 CH63_3673 CH63_3673 serC serC 4029514 4030599 + phosphoserine transaminase serC_1: phosphoserine transaminase~[HE] COG1932 Phosphoserine aminotransferase gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3673 CH63_3674 CH63_3674 aroA aroA 4030762 4032048 + 3-phosphoshikimate 1-carboxyvinyltransferase aroA: 3-phosphoshikimate 1-carboxyvinyltransferase~[E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3674 CH63_3675 CH63_3675 cmk cmk 4032361 4033053 + cytidylate kinase cmk: cytidylate kinase~[F] COG0283 Cytidylate kinase gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3675 CH63_3676 CH63_3676 rpsA rpsA 4033227 4034900 + ribosomal protein S1 rpsA: ribosomal protein S1~[J] COG0539 Ribosomal protein S1 gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3676 CH63_3677 CH63_3677 CH63_3677 4035229 4035531 - hypothetical protein conserved hypothetical protein gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3677 CH63_3678 CH63_3678 ihfB ihfB 4034961 4035245 + integration host factor%2C beta subunit hip: integration host factor%2C beta subunit~[L] COG0776 Bacterial nucleoid DNA-binding protein gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3678 CH63_3679 CH63_3679 CH63_3679 4035792 4038082 + putative membrane protein%3BDNA internalization-related competence protein ComEC/Rec2 pseudogene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3679 CH63_368 CH63_368 acnA acnA 391683 394355 - aconitate hydratase 1 aconitase_1: aconitate hydratase 1~[C] COG1048 Aconitase A gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_368 CH63_3681 CH63_3681 msbA msbA 4038118 4039866 + lipid A export permease/ATP-binding protein MsbA msbA_lipidA: lipid A export permease/ATP-binding protein MsbA~[V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3681 CH63_3682 CH63_3682 lpxK lpxK 4039863 4040849 + tetraacyldisaccharide 4'-kinase lpxK: tetraacyldisaccharide 4'-kinase~[M] COG1663 Tetraacyldisaccharide-1-P 4'-kinase gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3682 CH63_3683 CH63_3683 CH63_3683 4040857 4042284 - hypothetical protein conserved hypothetical protein~[S] COG5383 Uncharacterized protein conserved in bacteria gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3683 CH63_3684 CH63_3684 CH63_3684 4043011 4043220 + 'Cold-shock' DNA-binding domain protein [K] COG1278 Cold shock proteins gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3684 CH63_3685 CH63_3685 CH63_3685 4043768 4043950 + trm112p-like family protein [S] COG2835 Uncharacterized conserved protein gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3685 CH63_3686 CH63_3686 kdsB kdsB 4043947 4044699 + 3-deoxy-D-manno-octulosonate cytidylyltransferase kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase~[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3686 CH63_3687 CH63_3687 CH63_3687 4045062 4045955 + fructosamine kinase family protein gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3687 CH63_3688 CH63_3688 CH63_3688 4046728 4047513 + methyltransferase small domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3688 CH63_3689 CH63_3689 CH63_3689 4047510 4048832 + kicB killing factor family protein [D] COG3006 Uncharacterized protein involved in chromosome partitioning gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3689 CH63_369 CH63_369 CH63_369 394719 395576 - hypothetical protein conserved hypothetical protein gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_369 CH63_3690 CH63_3690 mukE mukE 4048813 4049541 + chromosome partition protein mukE [D] COG3095 Uncharacterized protein involved in chromosome partitioning gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3690 CH63_3691 CH63_3691 CH63_3691 4049538 4053995 + hypothetical protein mukB N-terminal family protein~[D] COG3096 Uncharacterized protein involved in chromosome partitioning gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3691 CH63_3692 CH63_3692 CH63_3692 4054211 4054669 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3692 CH63_3693 CH63_3693 CH63_3693 4055100 4056809 + L%2CD-transpeptidase catalytic domain protein [S] COG2989 Uncharacterized protein conserved in bacteria gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3693 CH63_3694 CH63_3694 CH63_3694 4057033 4057581 + hypothetical protein conserved hypothetical protein~[S] COG3108 Uncharacterized protein conserved in bacteria gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3694 CH63_3695 CH63_3695 CH63_3695 4057642 4058289 + beta-lactamase superfamily domain protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3695 CH63_3696 CH63_3696 aspC aspC 4058713 4059903 - aspartate aminotransferase [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3696 CH63_3697 CH63_3697 CH63_3697 4060160 4061239 - gram-negative porin family protein [M] COG3203 Outer membrane protein (porin) gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3697 CH63_3698 CH63_3698 asnS asnS 4061540 4062940 - asparagine--tRNA ligase asnS: asparagine--tRNA ligase~[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3698 CH63_3699 CH63_3699 pncB pncB 4063439 4064644 - nicotinate phosphoribosyltransferase NAPRTase: nicotinate phosphoribosyltransferase~[H] COG1488 Nicotinic acid phosphoribosyltransferase gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3699 CH63_37 CH63_37 CH63_37 33579 33968 + phage antitermination Q family protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_37 CH63_370 CH63_370 CH63_370 395912 396886 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_370 CH63_3700 CH63_3700 pepN pepN 4065360 4067975 + aminopeptidase N pepN_proteo: aminopeptidase N~[E] COG0308 Aminopeptidase N gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3700 CH63_3701 CH63_3701 pyrD pyrD 4068593 4069603 + dihydroorotate dehydrogenase pyrD_sub2: dihydroorotate dehydrogenase~[F] COG0167 Dihydroorotate dehydrogenase gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3701 CH63_3702 CH63_3702 CH63_3702 4069786 4070337 + hypothetical protein conserved hypothetical protein gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3702 CH63_3703 CH63_3703 CH63_3703 4070363 4071472 - 2Fe-2S iron-sulfur cluster binding domain protein [R] COG3217 Uncharacterized Fe-S protein gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3703 CH63_3704 CH63_3704 CH63_3704 4071575 4073695 + THUMP domain protein [R] COG1092 Predicted SAM-dependent methyltransferases gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3704 CH63_3705 CH63_3705 ccmA ccmA 4073701 4075614 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3705 CH63_3706 CH63_3706 CH63_3706 4075812 4077029 + integral membrane%2C PqiA family protein pqiA_fam: integral membrane%2C PqiA family protein~[S] COG2995 Uncharacterized paraquat-inducible protein A gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3706 CH63_3707 CH63_3707 CH63_3707 4077016 4078668 + mce related family protein [R] COG3008 Paraquat-inducible protein B gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3707 CH63_3708 CH63_3708 CH63_3708 4078665 4079243 + hypothetical protein conserved hypothetical protein~[S] COG3009 Uncharacterized protein conserved in bacteria gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3708 CH63_3709 CH63_3709 CH63_3709 4079878 4080336 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3709 CH63_371 CH63_371 topA topA 397283 399898 - DNA topoisomerase I topA_bact: DNA topoisomerase I~[L] COG0551 Zn-finger domain associated with topoisomerase type I gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_371 CH63_3710 CH63_3710 CH63_3710 4080453 4081481 - hypothetical protein thiolase%2C N-terminal domain protein~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3710 CH63_3711 CH63_3711 CH63_3711 4081497 4082276 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3711 CH63_3712 CH63_3712 CH63_3712 4082276 4083298 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3712 CH63_3713 CH63_3713 CH63_3713 4083312 4083686 - hypothetical protein beta-ketoacyl synthase%2C N-terminal domain protein~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3713 CH63_3714 CH63_3714 CH63_3714 4083932 4084120 + putative membrane protein gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3714 CH63_3715 CH63_3715 fabA fabA 4084386 4084904 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA~[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3715 CH63_3716 CH63_3716 CH63_3716 4084973 4086556 - hypothetical protein lon protease (S16) C-terminal proteolytic domain protein~[O] COG1067 Predicted ATP-dependent protease gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3716 CH63_3717 CH63_3717 CH63_3717 4086935 4087390 + organizer of macrodomain of Terminus of chromosome family protein [S] COG3120 Uncharacterized protein conserved in bacteria gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3717 CH63_3718 CH63_3718 CH63_3718 4087559 4088017 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3718 CH63_3719 CH63_3719 ompA ompA 4088207 4089268 - outer membrane protein A [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3719 CH63_372 CH63_372 CH63_372 399925 400224 - hypothetical protein conserved hypothetical protein gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_372 CH63_3720 CH63_3720 CH63_3720 4089626 4090132 - cell division inhibitor SulA family protein [D] COG5404 SOS-response cell division inhibitor%2C blocks FtsZ ring formation gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3720 CH63_3721 CH63_3721 CH63_3721 4090361 4090996 + hypothetical protein tfoX N-terminal domain protein~[K] COG3070 Regulator of competence-specific genes gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3721 CH63_3722 CH63_3722 CH63_3722 4091098 4093236 - integral membrane%2C YccS/YhfK family protein YCCS_YHJK: integral membrane%2C YccS/YhfK family protein~[S] COG1289 Predicted membrane protein gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3722 CH63_3723 CH63_3723 CH63_3723 4093266 4093712 - hypothetical protein conserved hypothetical protein~[S] COG3304 Predicted membrane protein gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3723 CH63_3724 CH63_3724 CH63_3724 4093906 4095960 + hypothetical protein uvrD/REP helicase N-terminal domain protein~[L] COG0210 Superfamily I DNA and RNA helicases gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3724 CH63_3725 CH63_3725 mgsA mgsA 4096021 4096485 - methylglyoxal synthase MGSA: methylglyoxal synthase~[G] COG1803 Methylglyoxal synthase gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3725 CH63_3726 CH63_3726 CH63_3726 4096527 4097345 - hypothetical protein conserved hypothetical protein~[S] COG3110 Uncharacterized protein conserved in bacteria gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3726 CH63_3727 CH63_3727 CH63_3727 4097661 4098077 + coA binding domain protein [R] COG1832 Predicted CoA-binding protein gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3727 CH63_3728 CH63_3728 CH63_3728 4098186 4098503 - hemimethylated DNA binding domain protein yccV: hemimethylated DNA binding domain protein~[S] COG3785 Uncharacterized conserved protein gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3728 CH63_3729 CH63_3729 CH63_3729 4098564 4099754 - met-10+ like-family protein [R] COG1092 Predicted SAM-dependent methyltransferases gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3729 CH63_373 CH63_373 yciN yciN 400317 400568 + protein yciN gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_373 CH63_3730 CH63_3730 CH63_3730 4099848 4100126 + acylphosphatase family protein [C] COG1254 Acylphosphatases gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3730 CH63_3731 CH63_3731 tusE tusE 4100178 4100507 - sulfur relay%2C TusE/DsrC/DsvC family protein dsrC_tusE_dsvC: sulfur relay%2C TusE/DsrC/DsvC family protein~[P] COG2920 Dissimilatory sulfite reductase (desulfoviridin)%2C gamma subunit gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3731 CH63_3732 CH63_3732 CH63_3732 4100748 4100835 + tRNA-Ser tRNA gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3732 CH63_3733 CH63_3733 CH63_3733 4101255 4101542 + DDE domain protein [L] COG3316 Transposase and inactivated derivatives gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3733 CH63_3734 CH63_3734 cnf1 cnf1 4101912 4102268 + cytotoxic necrotizing factor 1 domain protein gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3734 CH63_3735 CH63_3735 cnf1 cnf1 4102275 4102553 + cytotoxic necrotizing factor 1 domain protein gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3735 CH63_3736 CH63_3736 cnf1 cnf1 4102550 4103719 + cytotoxic necrotizing factor 1 domain protein gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3736 CH63_3737 CH63_3737 CH63_3737 4104153 4106570 - berberine and berberine like family protein [C] COG0277 FAD/FMN-containing dehydrogenases gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3737 CH63_3738 CH63_3738 CH63_3738 4106724 4107470 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3738 CH63_3739 CH63_3739 CH63_3739 4108099 4108419 + hypothetical protein conserved hypothetical protein gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3739 CH63_374 CH63_374 CH63_374 400687 401718 - serine dehydrogenase ase family protein [OU] COG0616 Periplasmic serine proteases (ClpP class) gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_374 CH63_3740 CH63_3740 CH63_3740 4108683 4109207 + fabA-like domain protein [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3740 CH63_3741 CH63_3741 CH63_3741 4109197 4110480 + hypothetical protein beta-ketoacyl synthase%2C C-terminal domain protein~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3741 CH63_3742 CH63_3742 CH63_3742 4110473 4111219 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3742 CH63_3743 CH63_3743 CH63_3743 4111235 4112473 + 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein [I] COG3425 3-hydroxy-3-methylglutaryl CoA synthase gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3743 CH63_3744 CH63_3744 CH63_3744 4112466 4113185 + enoyl-CoA hydratase/isomerase family protein [I] COG1024 Enoyl-CoA hydratase/carnithine racemase gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3744 CH63_3745 CH63_3745 CH63_3745 4113187 4113939 + enoyl-CoA hydratase/isomerase family protein [I] COG1024 Enoyl-CoA hydratase/carnithine racemase gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3745 CH63_3746 CH63_3746 CH63_3746 4113942 4114730 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3746 CH63_3747 CH63_3747 CH63_3747 4114925 4115257 + lipocalin-like domain protein gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3747 CH63_3748 CH63_3748 CH63_3748 4115295 4115543 + phosphopantetheine attachment site family protein [IQ] COG0236 Acyl carrier protein gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3748 CH63_3749 CH63_3749 pksC pksC 4115642 4116490 + polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksC [I] COG0331 (acyl-carrier-protein) S-malonyltransferase gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3749 CH63_375 CH63_375 CH63_375 401905 402666 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_375 CH63_3750 CH63_3750 CH63_3750 4116546 4116659 + hypothetical protein gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3750 CH63_3751 CH63_3751 CH63_3751 4117479 4117979 + hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3751 CH63_3752 CH63_3752 CH63_3752 4118028 4119566 + hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3752 CH63_3753 CH63_3753 CH63_3753 4119578 4120930 + hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3753 CH63_3754 CH63_3754 CH63_3754 4120927 4121613 + type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3754 CH63_3755 CH63_3755 CH63_3755 4121613 4123349 + ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3755 CH63_3756 CH63_3756 CH63_3756 4123353 4123844 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3756 CH63_3757 CH63_3757 clpV clpV 4124232 4126874 + type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3757 CH63_3758 CH63_3758 CH63_3758 4126877 4129225 + Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3758 CH63_3759 CH63_3759 CH63_3759 4129241 4131541 + peptidase M23 family protein gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3759 CH63_376 CH63_376 cobO cobO 402683 403273 + cob(I)yrinic acid a%2Cc-diamide adenosyltransferase cobA: cob(I)yrinic acid a%2Cc-diamide adenosyltransferase~[H] COG2109 ATP:corrinoid adenosyltransferase gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_376 CH63_3760 CH63_3760 CH63_3760 4131538 4132311 + putative exported protein gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3760 CH63_3761 CH63_3761 CH63_3761 4132465 4132725 + hypothetical protein conserved hypothetical protein~[S] COG4253 Uncharacterized protein conserved in bacteria gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3761 CH63_3762 CH63_3762 CH63_3762 4134919 4135020 - hypothetical protein gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3762 CH63_3763 CH63_3763 CH63_3763 4132741 4134924 + peptidase M23 family protein gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3763 CH63_3764 CH63_3764 CH63_3764 4135619 4135786 + hypothetical protein gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3764 CH63_3765 CH63_3765 CH63_3765 4137732 4138964 + hypothetical protein conserved hypothetical protein gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3765 CH63_3766 CH63_3766 CH63_3766 4138961 4142383 + intracellular multiplication and macrophage-killing family protein [S] COG3523 Uncharacterized protein conserved in bacteria gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3766 CH63_3767 CH63_3767 CH63_3767 4142427 4144028 + hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3767 CH63_3768 CH63_3768 CH63_3768 4144046 4145104 + PAAR motif family protein gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3768 CH63_3769 CH63_3769 CH63_3769 4145104 4145574 + hypothetical protein gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3769 CH63_377 CH63_377 CH63_377 403396 404352 - pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_377 CH63_3770 CH63_3770 CH63_3770 4145795 4147558 + hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3770 CH63_3771 CH63_3771 CH63_3771 4147522 4148607 + hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3771 CH63_3772 CH63_3772 CH63_3772 4148675 4149163 + type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3772 CH63_3773 CH63_3773 CH63_3773 4149163 4149615 + 25-like lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3773 CH63_3774 CH63_3774 CH63_3774 4149640 4151007 + hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3774 CH63_3775 CH63_3775 CH63_3775 4151219 4151842 - hypothetical protein conserved hypothetical protein gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3775 CH63_3776 CH63_3776 ccmA ccmA 4152525 4154120 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3776 CH63_3777 CH63_3777 CH63_3777 4154348 4155001 + hypothetical protein conserved hypothetical protein gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3777 CH63_3778 CH63_3778 CH63_3778 4155045 4156253 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3778 CH63_3779 CH63_3779 moeB moeB 4156389 4157159 - molybdopterin synthase sulfurylase MoeB moeB: molybdopterin synthase sulfurylase MoeB~[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3779 CH63_378 CH63_378 CH63_378 404777 405397 - tRNA threonylcarbamoyl adenosine modification protein%2C Sua5/YciO/YrdC/YwlC family [J] COG0009 Putative translation factor (SUA5) gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_378 CH63_3780 CH63_3780 CH63_3780 4157161 4158435 - molybdenum cofactor synthesis domain protein molyb_syn: molybdenum cofactor synthesis domain protein~[H] COG0303 Molybdopterin biosynthesis enzyme gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3780 CH63_3781 CH63_3781 CH63_3781 4158970 4160280 - radical SAM additional 4Fe4S-binding SPASM domain protein rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain protein~[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3781 CH63_3782 CH63_3782 CH63_3782 4160290 4160958 - ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3782 CH63_3783 CH63_3783 CH63_3783 4160960 4162222 - efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3783 CH63_3784 CH63_3784 CH63_3784 4162224 4164584 - macB-like periplasmic core domain protein gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3784 CH63_3785 CH63_3785 CH63_3785 4164668 4164868 - hypothetical protein conserved hypothetical protein gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3785 CH63_3786 CH63_3786 fghA fghA 4165137 4165979 - S-formylglutathione hydrolase fghA_ester_D: S-formylglutathione hydrolase~[R] COG0627 Predicted esterase gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3786 CH63_3787 CH63_3787 CH63_3787 4166000 4167139 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase~[C] COG1062 Zn-dependent alcohol dehydrogenases%2C class III gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3787 CH63_3788 CH63_3788 CH63_3788 4167413 4168282 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3788 CH63_3789 CH63_3789 CH63_3789 4168418 4169569 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3789 CH63_379 CH63_379 CH63_379 405414 406349 - PHP domain protein [R] COG0613 Predicted metal-dependent phosphoesterases (PHP family) gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_379 CH63_3790 CH63_3790 folE folE 4169753 4170415 + GTP cyclohydrolase I folE: GTP cyclohydrolase I~[H] COG0302 GTP cyclohydrolase I gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3790 CH63_3791 CH63_3791 CH63_3791 4170470 4171636 + hypothetical protein conserved hypothetical protein~[S] COG2311 Predicted membrane protein gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3791 CH63_3792 CH63_3792 mglB mglB 4172384 4173376 + D-galactose-binding periplasmic protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3792 CH63_3793 CH63_3793 CH63_3793 4173606 4175126 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3793 CH63_3794 CH63_3794 CH63_3794 4175147 4176157 + branched-chain amino acid transport system / permease component family protein [G] COG4211 ABC-type glucose/galactose transport system%2C permease component gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3794 CH63_3795 CH63_3795 CH63_3795 4176602 4177339 - hypothetical protein conserved hypothetical protein~[S] COG2949 Uncharacterized membrane protein gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3795 CH63_3796 CH63_3796 CH63_3796 4177620 4179317 - malic enzyme%2C NAD binding domain protein [C] COG0281 Malic enzyme gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3796 CH63_3797 CH63_3797 cdd cdd 4179673 4180557 - cytidine deaminase cyt_deam_dimer: cytidine deaminase~[F] COG0295 Cytidine deaminase gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3797 CH63_3798 CH63_3798 CH63_3798 4180883 4181467 - lrgB-like family protein [M] COG1346 Putative effector of murein hydrolase gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3798 CH63_3799 CH63_3799 CH63_3799 4181575 4181982 - lrgA family protein [R] COG1380 Putative effector of murein hydrolase LrgA gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3799 CH63_38 CH63_38 CH63_38 34239 34802 + hypothetical protein BRO family%2C N-terminal domain protein~[K] COG3617 Prophage antirepressor gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_38 CH63_380 CH63_380 trpE trpE 406768 408330 + anthranilate synthase component I trpE_proteo: anthranilate synthase component I~[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_380 CH63_3800 CH63_3800 CH63_3800 4182224 4183405 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3800 CH63_3801 CH63_3801 CH63_3801 4183738 4184974 - LVIVD repeat family protein pseudogene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3801 CH63_3803 CH63_3803 CH63_3803 4185010 4186086 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3803 CH63_3804 CH63_3804 CH63_3804 4186784 4187446 + putative membrane protein gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3804 CH63_3805 CH63_3805 CH63_3805 4187664 4188122 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3805 CH63_3806 CH63_3806 metG metG 4188286 4190313 - methionine--tRNA ligase metG: methionine--tRNA ligase~[J] COG0143 Methionyl-tRNA synthetase gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3806 CH63_3807 CH63_3807 CH63_3807 4190578 4191690 + 4Fe-4S iron sulfur cluster binding s%2C NifH/frxC family protein [D] COG0489 ATPases involved in chromosome partitioning gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3807 CH63_3808 CH63_3808 udk udk 4191935 4192576 + uridine kinase udk: uridine kinase~[F] COG0572 Uridine kinase gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3808 CH63_3809 CH63_3809 dcd dcd 4192681 4193262 + deoxycytidine triphosphate deaminase dCTP_deam: deoxycytidine triphosphate deaminase~[F] COG0717 Deoxycytidine deaminase gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3809 CH63_381 CH63_381 trpG trpG 408330 408908 + anthranilate synthase component II [EH] COG0512 Anthranilate/para-aminobenzoate synthases component II gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_381 CH63_3810 CH63_3810 CH63_3810 4193449 4195305 + asmA family protein [M] COG2982 Uncharacterized protein involved in outer membrane biogenesis gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3810 CH63_3811 CH63_3811 CH63_3811 4195450 4197063 - integral membrane TerC family protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3811 CH63_3812 CH63_3812 fhuF fhuF 4197505 4198284 + siderophore-iron reductase FhuF fe_III_red_FhuF: siderophore-iron reductase FhuF~[R] COG4114 Uncharacterized Fe-S protein gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3812 CH63_3813 CH63_3813 CH63_3813 4198436 4199983 + beta-eliminating lyase family protein [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3813 CH63_3814 CH63_3814 CH63_3814 4200018 4201316 + pyridine nucleotide-disulfide oxidoreductase family protein [Q] COG3486 Lysine/ornithine N-monooxygenase gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3814 CH63_3815 CH63_3815 CH63_3815 4201316 4201894 + acetyltransferase domain protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3815 CH63_3816 CH63_3816 CH63_3816 4201891 4203735 + iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3816 CH63_3817 CH63_3817 CH63_3817 4203844 4204662 - ABC transporter family protein [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3817 CH63_3818 CH63_3818 CH63_3818 4204689 4205729 - fecCD transport family protein [P] COG4779 ABC-type enterobactin transport system%2C permease component gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3818 CH63_3819 CH63_3819 CH63_3819 4205716 4206756 - fecCD transport family protein [P] COG0609 ABC-type Fe3+-siderophore transport system%2C permease component gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3819 CH63_382 CH63_382 trpD trpD 408923 409921 + anthranilate phosphoribosyltransferase [E] COG0547 Anthranilate phosphoribosyltransferase gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_382 CH63_3820 CH63_3820 CH63_3820 4206753 4207832 - periplasmic binding family protein [P] COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3820 CH63_3821 CH63_3821 CH63_3821 4207922 4210183 - TonB-dependent siderophore receptor family protein tonB-siderophor: TonB-dependent siderophore receptor family protein~[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3821 CH63_3822 CH63_3822 CH63_3822 4210396 4212210 - iucA / IucC family protein [Q] COG4264 Siderophore synthetase component gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3822 CH63_3823 CH63_3823 galU galU 4213156 4214046 + UTP--glucose-1-phosphate uridylyltransferase galU: UTP--glucose-1-phosphate uridylyltransferase~[M] COG1210 UDP-glucose pyrophosphorylase gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3823 CH63_3824 CH63_3824 galU galU 4214130 4215023 + UTP--glucose-1-phosphate uridylyltransferase galU: UTP--glucose-1-phosphate uridylyltransferase~[M] COG1210 UDP-glucose pyrophosphorylase gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3824 CH63_3825 CH63_3825 gnd gnd 4215409 4216818 + 6-phosphogluconate dehydrogenase gnd: 6-phosphogluconate dehydrogenase~[G] COG0362 6-phosphogluconate dehydrogenase gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3825 CH63_3826 CH63_3826 hisE hisE 4217018 4217632 - phosphoribosyl-ATP diphosphatase histidine_hisI: phosphoribosyl-ATP diphosphatase~[E] COG0139 Phosphoribosyl-AMP cyclohydrolase gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3826 CH63_3827 CH63_3827 hisF hisF 4217626 4218402 - imidazole glycerol phosphate synthase subunit hisF [E] COG0107 Imidazoleglycerol-phosphate synthase gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3827 CH63_3828 CH63_3828 hisA hisA 4218384 4219121 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase [E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3828 CH63_3829 CH63_3829 hisH hisH 4219127 4219717 - imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit IMP_synth_hisH: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~[E] COG0118 Glutamine amidotransferase gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3829 CH63_383 CH63_383 CH63_383 409925 411352 + indole-3-glycerol phosphate synthase family protein [E] COG0134 Indole-3-glycerol phosphate synthase gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_383 CH63_3830 CH63_3830 hisB hisB 4219717 4220784 - histidinol-phosphatase hisB_Nterm: histidinol-phosphatase~[E] COG0131 Imidazoleglycerol-phosphate dehydratase gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3830 CH63_3831 CH63_3831 hisC hisC 4220781 4221929 - histidinol-phosphate transaminase hisC: histidinol-phosphate transaminase~[E] COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3831 CH63_3832 CH63_3832 hisD hisD 4221932 4223263 - histidinol dehydrogenase hisD: histidinol dehydrogenase~[E] COG0141 Histidinol dehydrogenase gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3832 CH63_3833 CH63_3833 hisG hisG 4223267 4224166 - ATP phosphoribosyltransferase hisG: ATP phosphoribosyltransferase~[E] COG0040 ATP phosphoribosyltransferase gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3833 CH63_3834 CH63_3834 CH63_3834 4224872 4225699 + rmlD substrate binding domain protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3834 CH63_3835 CH63_3835 CH63_3835 4225854 4226264 - putative exported protein gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3835 CH63_3836 CH63_3836 CH63_3836 4226533 4227528 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3836 CH63_3837 CH63_3837 CH63_3837 4227525 4228214 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3837 CH63_3838 CH63_3838 CH63_3838 4228172 4229065 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3838 CH63_3839 CH63_3839 CH63_3839 4229351 4230442 + iron-containing alcohol dehydrogenase family protein [C] COG0371 Glycerol dehydrogenase and related enzymes gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3839 CH63_384 CH63_384 trpB trpB 411509 412699 + tryptophan synthase%2C beta subunit trpB: tryptophan synthase%2C beta subunit~[E] COG0133 Tryptophan synthase beta chain gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_384 CH63_3840 CH63_3840 CH63_3840 4230697 4230912 + hypothetical protein conserved hypothetical protein gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3840 CH63_3841 CH63_3841 CH63_3841 4230902 4232293 + amino acid permease family protein [E] COG0531 Amino acid transporters gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3841 CH63_3842 CH63_3842 CH63_3842 4233030 4234460 - hypothetical protein exonuclease C-terminal family protein~[L] COG2925 Exonuclease I gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3842 CH63_3843 CH63_3843 CH63_3843 4234753 4235862 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3843 CH63_3844 CH63_3844 CH63_3844 4236296 4236613 + hypothetical protein conserved hypothetical protein~[S] COG2926 Uncharacterized protein conserved in bacteria gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3844 CH63_3845 CH63_3845 CH63_3845 4238155 4241307 - bacterial Ig-like domain family protein gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3845 CH63_3846 CH63_3846 CH63_3846 4236984 4238192 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3846 CH63_3847 CH63_3847 CH63_3847 4242332 4243636 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3847 CH63_3848 CH63_3848 CH63_3848 4243645 4244067 - hypothetical protein conserved hypothetical protein~[S] COG3011 Uncharacterized protein conserved in bacteria gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3848 CH63_3849 CH63_3849 CH63_3849 4244495 4245235 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3849 CH63_385 CH63_385 trpA trpA 412699 413505 + tryptophan synthase%2C alpha subunit trpA: tryptophan synthase%2C alpha subunit~[E] COG0159 Tryptophan synthase alpha chain gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_385 CH63_3850 CH63_3850 CH63_3850 4245283 4246125 + fumarylacetoacetate (FAA) hydrolase family protein [Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3850 CH63_3851 CH63_3851 CH63_3851 4246157 4247434 + methylaspartate ammonia-lyase family protein [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3851 CH63_3852 CH63_3852 CH63_3852 4247513 4247686 + hypothetical protein gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3852 CH63_3853 CH63_3853 lldD lldD 4247731 4248876 + L-lactate dehydrogenase cytochrome [C] COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3853 CH63_3854 CH63_3854 argG argG 4249081 4250448 - argininosuccinate synthase argG: argininosuccinate synthase~[E] COG0137 Argininosuccinate synthase gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3854 CH63_3855 CH63_3855 CH63_3855 4250775 4252172 + MATE efflux family protein matE: MATE efflux family protein~[V] COG0534 Na+-driven multidrug efflux pump gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3855 CH63_3856 CH63_3856 CH63_3856 4252200 4253540 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3856 CH63_3857 CH63_3857 CH63_3857 4253576 4254457 - polysaccharide deacetylase family protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3857 CH63_3858 CH63_3858 CH63_3858 4255034 4255729 + putative exported protein gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3858 CH63_3859 CH63_3859 CH63_3859 4255819 4256358 + hypothetical protein conserved hypothetical protein~[S] COG3122 Uncharacterized protein conserved in bacteria gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3859 CH63_386 CH63_386 CH63_386 413848 414162 + BON domain protein [R] COG2823 Predicted periplasmic or secreted lipoprotein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_386 CH63_3860 CH63_3860 CH63_3860 4256704 4256779 - tRNA-Asn tRNA gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3860 CH63_3861 CH63_3861 CH63_3861 4257225 4257854 - bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3861 CH63_3862 CH63_3862 CH63_3862 4258112 4259404 - TRAP transporter%2C DctM subunit dctM: TRAP transporter%2C DctM subunit~[G] COG1593 TRAP-type C4-dicarboxylate transport system%2C large permease component gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3862 CH63_3863 CH63_3863 CH63_3863 4259424 4259930 - tripartite ATP-independent periplasmic transporter%2C DctQ component family protein [G] COG3090 TRAP-type C4-dicarboxylate transport system%2C small permease component gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3863 CH63_3864 CH63_3864 CH63_3864 4260054 4261046 - TRAP transporter solute receptor%2C DctP family protein dctP: TRAP transporter solute receptor%2C DctP family protein~[G] COG1638 TRAP-type C4-dicarboxylate transport system%2C periplasmic component gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3864 CH63_3865 CH63_3865 CH63_3865 4261569 4262309 + 4'-phosphopantetheinyl transferase superfamily protein [Q] COG2977 Phosphopantetheinyl transferase component of siderophore synthetase gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3865 CH63_3866 CH63_3866 CH63_3866 4262347 4262448 + hypothetical protein conserved hypothetical protein gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3866 CH63_3867 CH63_3867 CH63_3867 4262515 4262679 - hypothetical protein conserved hypothetical protein gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3867 CH63_3868 CH63_3868 CH63_3868 4262696 4264822 - melibiase family protein [G] COG3345 Alpha-galactosidase gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3868 CH63_3869 CH63_3869 lacY lacY 4264900 4266120 - lactose permease [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3869 CH63_387 CH63_387 CH63_387 414309 414944 - oprF membrane domain protein [M] COG3047 Outer membrane protein W gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_387 CH63_3870 CH63_3870 CH63_3870 4266202 4267410 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3870 CH63_3871 CH63_3871 CH63_3871 4267885 4268772 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3871 CH63_3872 CH63_3872 CH63_3872 4268786 4269799 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3872 CH63_3873 CH63_3873 CH63_3873 4269799 4270577 + istB-like ATP binding family protein pseudogene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3873 CH63_3875 CH63_3875 CH63_3875 4270593 4270850 + lacI family transcription regulator domain protein gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3875 CH63_3876 CH63_3876 CH63_3876 4270998 4271073 - tRNA-Asn tRNA gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3876 CH63_3877 CH63_3877 mtfA mtfA 4271251 4272063 - protein mtfA [S] COG3228 Uncharacterized protein conserved in bacteria gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3877 CH63_3878 CH63_3878 CH63_3878 4272453 4272737 - YCII-related domain protein [S] COG2350 Uncharacterized protein conserved in bacteria gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3878 CH63_3879 CH63_3879 CH63_3879 4272974 4273825 - RIO1 family protein [TD] COG1718 Serine/threonine protein kinase involved in cell cycle control gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3879 CH63_388 CH63_388 CH63_388 415430 416200 + hypothetical protein conserved hypothetical protein gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_388 CH63_3880 CH63_3880 CH63_3880 4273928 4275646 - ABC transporter family protein [V] COG1132 ABC-type multidrug transport system%2C ATPase and permease components gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3880 CH63_3881 CH63_3881 CH63_3881 4276302 4276466 + putative membrane protein gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3881 CH63_3882 CH63_3882 CH63_3882 4276548 4276934 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3882 CH63_3883 CH63_3883 CH63_3883 4277165 4277278 + putative membrane protein gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3883 CH63_3884 CH63_3884 CH63_3884 4277490 4277729 + hypothetical protein conserved hypothetical protein gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3884 CH63_3885 CH63_3885 CH63_3885 4277820 4278053 - yobH-like family protein gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3885 CH63_3886 CH63_3886 CH63_3886 4278636 4278911 + yebO-like family protein gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3886 CH63_3887 CH63_3887 CH63_3887 4279174 4279473 + hypothetical protein conserved hypothetical protein gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3887 CH63_3888 CH63_3888 CH63_3888 4279582 4279827 + hypothetical protein conserved hypothetical protein gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3888 CH63_3889 CH63_3889 CH63_3889 4280064 4281437 + amino acid permease family protein [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3889 CH63_389 CH63_389 CH63_389 416321 416941 - STAS domain protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_389 CH63_3890 CH63_3890 CH63_3890 4281729 4282340 - antimicrobial peptide resistance and lipid A acylation PagP family protein gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3890 CH63_3891 CH63_3891 CH63_3891 4282741 4282905 - hypothetical protein conserved hypothetical protein gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3891 CH63_3892 CH63_3892 cspC cspC 4283501 4283710 + cold shock-like protein CspC [K] COG1278 Cold shock proteins gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3892 CH63_3893 CH63_3893 CH63_3893 4283801 4284556 - multi-copper polyphenol oxidoreductase laccase family protein [S] COG1496 Uncharacterized conserved protein gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3893 CH63_3894 CH63_3894 CH63_3894 4284951 4285790 + ubiE/COQ5 methyltransferase family protein [QR] COG0500 SAM-dependent methyltransferases gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3894 CH63_3895 CH63_3895 CH63_3895 4286012 4286290 - hypothetical protein conserved hypothetical protein gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3895 CH63_3896 CH63_3896 CH63_3896 4286512 4287867 - diguanylate cyclase domain protein GGDEF: diguanylate cyclase domain protein~[T] COG2199 FOG: GGDEF domain gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3896 CH63_3897 CH63_3897 CH63_3897 4288076 4288594 - sensory box protein [T] COG2202 FOG: PAS/PAC domain gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3897 CH63_3898 CH63_3898 fcuA fcuA 4288953 4291229 + ferrichrome receptor fcuA [P] COG1629 Outer membrane receptor proteins%2C mostly Fe transport gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3898 CH63_3899 CH63_3899 CH63_3899 4291390 4291959 - hypothetical protein conserved hypothetical protein~[S] COG1971 Predicted membrane protein gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3899 CH63_39 CH63_39 CH63_39 34887 35063 - hypothetical protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_39 CH63_390 CH63_390 CH63_390 416973 418055 - sulfate transporter family protein [P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_390 CH63_3900 CH63_3900 CH63_3900 4292388 4292849 - hypothetical protein conserved hypothetical protein~[S] COG4811 Predicted membrane protein gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3900 CH63_3901 CH63_3901 CH63_3901 4293049 4293927 - PTS system%2C mannose/fructose/sorbose%2C IID component family protein EIID-AGA: PTS system%2C mannose/fructose/sorbose%2C IID component family protein~[G] COG3716 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IID gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3901 CH63_3902 CH63_3902 CH63_3902 4293943 4294740 - PTS system%2C mannose/fructose/sorbose%2C IIC component family protein EII-Sor: PTS system%2C mannose/fructose/sorbose%2C IIC component family protein~[G] COG3715 Phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IIC gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3902 CH63_3903 CH63_3903 manX manX 4294832 4295806 - PTS system mannose-specific EIIAB component [G] COG2893 Phosphotransferase system%2C mannose/fructose-specific component IIA gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3903 CH63_3904 CH63_3904 CH63_3904 4296708 4297970 + integral membrane TerC family protein [R] COG1253 Hemolysins and related proteins containing CBS domains gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3904 CH63_3905 CH63_3905 hpaR hpaR 4298072 4298539 - homoprotocatechuate degradation operon regulator%2C HpaR hpaR: homoprotocatechuate degradation operon regulator%2C HpaR~[K] COG1846 Transcriptional regulators gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3905 CH63_3906 CH63_3906 hpaG hpaG 4298923 4299555 + 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase hpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C N-terminal subunit~[Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3906 CH63_3907 CH63_3907 hpaG hpaG 4299552 4300322 + 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase hpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase%2C C-terminal subunit~[Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3907 CH63_3908 CH63_3908 hpaE hpaE 4300319 4301815 + 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase hpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3908 CH63_3909 CH63_3909 hpaD hpaD 4301834 4302691 + 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase hpaD_Fe: 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase~[S] COG3384 Uncharacterized conserved protein gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3909 CH63_391 CH63_391 ispZ ispZ 418286 418828 + intracellular septation protein A ispZ: intracellular septation protein A~[D] COG2917 Intracellular septation protein A gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_391 CH63_3910 CH63_3910 CH63_3910 4302716 4303114 + 5-carboxymethyl-2-hydroxymuconate isomerase family protein [E] COG3232 5-carboxymethyl-2-hydroxymuconate isomerase gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3910 CH63_3911 CH63_3911 hpaH hpaH 4303108 4303911 + 2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase hpaH: 2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase~[Q] COG3971 2-keto-4-pentenoate hydratase gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3911 CH63_3912 CH63_3912 hpaI hpaI 4303922 4304728 + 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase hpaI: 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase~[G] COG3836 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3912 CH63_3913 CH63_3913 CH63_3913 4304754 4306122 + major Facilitator Superfamily protein%3BLPXTG cell wall anchor domain protein pseudogene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3913 CH63_3915 CH63_3915 hpaB hpaB 4306190 4307752 + 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component hpaB-2: 4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component~[Q] COG2368 Aromatic ring hydroxylase gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3915 CH63_3916 CH63_3916 hpaC hpaC 4307773 4308270 + 4-hydroxyphenylacetate 3-monooxygenase%2C reductase component hpaC: 4-hydroxyphenylacetate 3-monooxygenase%2C reductase component~[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases%2C DIM6/NTAB family gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3916 CH63_3917 CH63_3917 CH63_3917 4308550 4309914 - L-serine ammonia-lyase sda_mono: L-serine ammonia-lyase~[E] COG1760 L-serine deaminase gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3917 CH63_3918 CH63_3918 CH63_3918 4310622 4311194 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3918 CH63_3919 CH63_3919 pabB pabB 4311218 4312594 - aminodeoxychorismate synthase%2C component I pabB: aminodeoxychorismate synthase%2C component I~[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3919 CH63_392 CH63_392 CH63_392 418908 419357 + thioesterase superfamily protein [I] COG1607 Acyl-CoA hydrolase gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_392 CH63_3920 CH63_3920 CH63_3920 4312759 4313016 + hypothetical protein conserved hypothetical protein~[S] COG3140 Uncharacterized protein conserved in bacteria gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3920 CH63_3921 CH63_3921 purT purT 4313142 4314323 - phosphoribosylglycinamide formyltransferase 2 purT: phosphoribosylglycinamide formyltransferase 2~[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3921 CH63_3922 CH63_3922 dbpA dbpA 4314636 4316018 + ATP-independent RNA helicase dbpA [LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3922 CH63_3923 CH63_3923 CH63_3923 4316112 4316432 + yebG family protein [S] COG3141 Uncharacterized protein conserved in bacteria gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3923 CH63_3924 CH63_3924 CH63_3924 4316472 4316780 + ASCH domain protein [S] COG3097 Uncharacterized protein conserved in bacteria gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3924 CH63_3925 CH63_3925 CH63_3925 4316887 4317297 + yebF-like family protein gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3925 CH63_3926 CH63_3926 CH63_3926 4317607 4319658 + prolyl oligopeptidase family protein [E] COG1770 Protease II gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3926 CH63_3927 CH63_3927 pip pip 4320380 4320574 + prolyl aminopeptidase [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3927 CH63_3928 CH63_3928 pip pip 4320579 4321331 + prolyl aminopeptidase pro_imino_pep_1: prolyl aminopeptidase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3928 CH63_3929 CH63_3929 CH63_3929 4321391 4321621 - DNA polymerase III%2C theta subunit gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3929 CH63_393 CH63_393 CH63_393 419505 420317 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_393 CH63_3930 CH63_3930 CH63_3930 4322022 4322531 + ferritin-like domain protein [P] COG1528 Ferritin-like protein gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3930 CH63_3931 CH63_3931 CH63_3931 4322928 4323314 + copC domain protein [R] COG2372 Uncharacterized protein%2C homolog of Cu resistance protein CopC gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3931 CH63_3932 CH63_3932 CH63_3932 4323317 4324201 + copper resistance D family protein [P] COG1276 Putative copper export protein gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3932 CH63_3933 CH63_3933 CH63_3933 4324298 4324639 + hypothetical protein conserved hypothetical protein gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3933 CH63_3934 CH63_3934 CH63_3934 4325162 4325488 - hypothetical protein conserved hypothetical protein gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3934 CH63_3935 CH63_3935 CH63_3935 4325482 4325940 - putative membrane protein gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3935 CH63_3936 CH63_3936 flhB flhB 4326472 4327632 + flagellar biosynthetic protein FlhB flhB: flagellar biosynthetic protein FlhB~[NU] COG1377 Flagellar biosynthesis pathway%2C component FlhB gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3936 CH63_3937 CH63_3937 flhA flhA 4327632 4329710 + flagellar biosynthesis protein FlhA flhA: flagellar biosynthesis protein FlhA~[NU] COG1298 Flagellar biosynthesis pathway%2C component FlhA gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3937 CH63_3938 CH63_3938 flhE flhE 4329710 4330132 + flagellar protein flhE gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3938 CH63_3939 CH63_3939 CH63_3939 4330790 4331800 + hypothetical protein conserved hypothetical protein gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3939 CH63_394 CH63_394 CH63_394 420274 420714 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_394 CH63_3940 CH63_3940 CH63_3940 4331790 4332248 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3940 CH63_3941 CH63_3941 CH63_3941 4332338 4334410 + bacterial Ig-like domain family protein gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3941 CH63_3942 CH63_3942 CH63_3942 4334600 4335037 - flgN family protein [NUO] COG3418 Flagellar biosynthesis/type III secretory pathway chaperone gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3942 CH63_3943 CH63_3943 flgM flgM 4335059 4335361 - flagellar biosynthesis anti-sigma factor FlgM flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM~[KNU] COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3943 CH63_3944 CH63_3944 flgA flgA 4335512 4336210 - flagella basal body P-ring formation protein FlgA flgA_cterm: flagella basal body P-ring formation protein FlgA~[NO] COG1261 Flagellar basal body P-ring biosynthesis protein gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3944 CH63_3945 CH63_3945 flgB flgB 4336449 4336862 + flagellar basal-body rod protein FlgB flgB: flagellar basal-body rod protein FlgB~[N] COG1815 Flagellar basal body protein gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3945 CH63_3946 CH63_3946 flgC flgC 4336868 4337272 + flagellar basal-body rod protein FlgC flgC: flagellar basal-body rod protein FlgC~[N] COG1558 Flagellar basal body rod protein gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3946 CH63_3947 CH63_3947 flgD flgD 4337287 4337964 + basal-body rod modification protein flgD [N] COG1843 Flagellar hook capping protein gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3947 CH63_3948 CH63_3948 CH63_3948 4338166 4339452 + flagellar hook-basal body family protein flgEFG_subfam: flagellar hook-basal body family protein~[N] COG1749 Flagellar hook protein FlgE gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3948 CH63_3949 CH63_3949 CH63_3949 4339474 4340103 + flagellar hook-basal body family protein flgEFG_subfam: flagellar hook-basal body family protein~[N] COG4787 Flagellar basal body rod protein gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3949 CH63_395 CH63_395 CH63_395 420750 421397 - hypothetical protein tonB_Cterm: TonB family C-terminal domain protein~[M] COG0810 Periplasmic protein TonB%2C links inner and outer membranes gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_395 CH63_3950 CH63_3950 flgG flgG 4340084 4340782 + flagellar basal-body rod protein FlgG flgG_G_neg: flagellar basal-body rod protein FlgG~[N] COG4786 Flagellar basal body rod protein gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3950 CH63_3951 CH63_3951 CH63_3951 4340956 4341615 + flagellar L-ring family protein [N] COG2063 Flagellar basal body L-ring protein gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3951 CH63_3952 CH63_3952 CH63_3952 4341630 4342739 + flagellar P-ring family protein [N] COG1706 Flagellar basal-body P-ring protein gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3952 CH63_3953 CH63_3953 flgJ flgJ 4342739 4343683 + flagellar rod assembly protein/muramidase FlgJ flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ~[MNO] COG3951 Rod binding protein gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3953 CH63_3954 CH63_3954 flgK flgK 4344554 4346218 + flagellar hook-associated protein FlgK flgK_ends: flagellar hook-associated protein FlgK~[N] COG1256 Flagellar hook-associated protein gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3954 CH63_3955 CH63_3955 flgL flgL 4346357 4347337 + flagellar hook-associated protein 3 flagell_flgL: flagellar hook-associated protein 3~[N] COG1344 Flagellin and related hook-associated proteins gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3955 CH63_3956 CH63_3956 CH63_3956 4347366 4348367 - putative sugar-binding domain protein [K] COG2390 Transcriptional regulator%2C contains sigma factor-related N-terminal domain gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3956 CH63_3957 CH63_3957 CH63_3957 4348585 4350651 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [S] COG3347 Uncharacterized conserved protein gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3957 CH63_3958 CH63_3958 CH63_3958 4350629 4350784 + hypothetical protein conserved hypothetical protein gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3958 CH63_3959 CH63_3959 CH63_3959 4350781 4351860 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3959 CH63_396 CH63_396 CH63_396 421540 421662 - hypothetical protein conserved hypothetical protein gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_396 CH63_3960 CH63_3960 CH63_3960 4351903 4352898 + periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3960 CH63_3961 CH63_3961 CH63_3961 4352964 4354541 + ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3961 CH63_3962 CH63_3962 CH63_3962 4354544 4355002 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3962 CH63_3963 CH63_3963 CH63_3963 4355026 4355565 + branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3963 CH63_3964 CH63_3964 CH63_3964 4355614 4356573 + pfkB carbohydrate kinase family protein [G] COG0524 Sugar kinases%2C ribokinase family gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3964 CH63_3965 CH63_3965 CH63_3965 4356831 4357250 - hypothetical protein conserved hypothetical protein~[S] COG1598 Uncharacterized conserved protein gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3965 CH63_3966 CH63_3966 CH63_3966 4357295 4357477 - ycfA-like family protein [N] COG1724 Predicted periplasmic or secreted lipoprotein gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3966 CH63_3967 CH63_3967 fliR fliR 4357684 4358466 - flagellar biosynthetic protein FliR fliR: flagellar biosynthetic protein FliR~[NU] COG1684 Flagellar biosynthesis pathway%2C component FliR gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3967 CH63_3968 CH63_3968 fliQ fliQ 4358469 4358738 - flagellar biosynthetic protein FliQ fliQ: flagellar biosynthetic protein FliQ~[NU] COG1987 Flagellar biosynthesis pathway%2C component FliQ gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3968 CH63_3969 CH63_3969 fliP fliP 4358844 4359668 - flagellar biosynthetic protein FliP fliP: flagellar biosynthetic protein FliP~[NU] COG1338 Flagellar biosynthesis pathway%2C component FliP gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3969 CH63_397 CH63_397 CH63_397 421866 422105 + YCII-related domain protein [S] COG2350 Uncharacterized protein conserved in bacteria gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_397 CH63_3970 CH63_3970 fliO fliO 4359665 4360201 - flagellar biosynthetic protein FliO fliO_TIGR: flagellar biosynthetic protein FliO~[N] COG3190 Flagellar biogenesis protein gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3970 CH63_3971 CH63_3971 fliN fliN 4360201 4360617 - flagellar motor switch protein FliN fliN: flagellar motor switch protein FliN~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3971 CH63_3972 CH63_3972 fliM fliM 4360614 4361615 - flagellar motor switch protein FliM fliM_switch: flagellar motor switch protein FliM~[N] COG1868 Flagellar motor switch protein gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3972 CH63_3973 CH63_3973 CH63_3973 4361621 4362091 - flagellar basal body-associated FliL family protein [N] COG1580 Flagellar basal body-associated protein gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3973 CH63_3974 CH63_3974 CH63_3974 4362358 4363710 - flagellar hook-length control FliK family protein [N] COG3144 Flagellar hook-length control protein gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3974 CH63_3975 CH63_3975 fliJ fliJ 4363707 4364153 - flagellar export protein FliJ flagell_FliJ: flagellar export protein FliJ~[NUO] COG2882 Flagellar biosynthesis chaperone gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3975 CH63_3976 CH63_3976 fliI fliI 4364253 4365731 - flagellar protein export ATPase FliI fliI_clade1: flagellar protein export ATPase FliI~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3976 CH63_3977 CH63_3977 CH63_3977 4365670 4366386 - flagellar assembly FliH family protein [NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3977 CH63_3978 CH63_3978 fliG fliG 4366379 4367371 - flagellar motor switch protein FliG fliG: flagellar motor switch protein FliG~[N] COG1536 Flagellar motor switch protein gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3978 CH63_3979 CH63_3979 fliF fliF 4367368 4369080 - flagellar M-ring protein FliF fliF: flagellar M-ring protein FliF~[NU] COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3979 CH63_398 CH63_398 CH63_398 422328 422573 + transcription factor zinc-finger family protein [S] COG3809 Uncharacterized protein conserved in bacteria gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_398 CH63_3980 CH63_3980 fliE fliE 4369433 4369744 + flagellar hook-basal body complex protein FliE fliE: flagellar hook-basal body complex protein FliE~[NU] COG1677 Flagellar hook-basal body protein gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3980 CH63_3981 CH63_3981 CH63_3981 4370164 4370343 + putative phage protein gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3981 CH63_3982 CH63_3982 CH63_3982 4370354 4370830 + death-on-curing family protein DOC_P1: death-on-curing family protein~[R] COG3654 Prophage maintenance system killer protein gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3982 CH63_3983 CH63_3983 CH63_3983 4371016 4371627 - hhH-GPD superbase excision DNA repair family protein [L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3983 CH63_3984 CH63_3984 CH63_3984 4371788 4372681 - HD domain protein [T] COG2206 HD-GYP domain gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3984 CH63_3985 CH63_3985 CH63_3985 4372830 4373669 - hypothetical protein conserved hypothetical protein~[T] COG2206 HD-GYP domain gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3985 CH63_3986 CH63_3986 CH63_3986 4373848 4374744 - putative hAMP domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3986 CH63_3987 CH63_3987 CH63_3987 4375098 4375973 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3987 CH63_3988 CH63_3988 fliT fliT 4376274 4376636 - flagellar protein FliT gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3988 CH63_3989 CH63_3989 fliS fliS 4376647 4377045 - flagellar protein FliS fliS: flagellar protein FliS~[NUO] COG1516 Flagellin-specific chaperone FliS gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3989 CH63_399 CH63_399 CH63_399 422689 422952 - hypothetical protein conserved hypothetical protein gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_399 CH63_3990 CH63_3990 fliD fliD 4377056 4378456 - flagellar hook-associated protein 2 [N] COG1345 Flagellar capping protein gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3990 CH63_3991 CH63_3991 CH63_3991 4378753 4379862 + hypothetical protein bacterial flagellin C-terminal helical region family protein~[N] COG1344 Flagellin and related hook-associated proteins gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3991 CH63_3992 CH63_3992 fliA fliA 4380209 4380931 + RNA polymerase sigma factor for flagellar operon [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3992 CH63_3993 CH63_3993 fliZ fliZ 4381153 4381662 + flagellar regulatory protein FliZ fliZ: flagellar regulatory protein FliZ gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3993 CH63_3994 CH63_3994 dcyD dcyD 4381951 4382943 + D-cysteine desulfhydrase [E] COG2515 1-aminocyclopropane-1-carboxylate deaminase gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3994 CH63_3995 CH63_3995 CH63_3995 4383067 4383867 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3995 CH63_3996 CH63_3996 CH63_3996 4383867 4384529 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3996 CH63_3997 CH63_3997 CH63_3997 4384532 4385293 + ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3997 CH63_3998 CH63_3998 CH63_3998 4385585 4385956 - HTH domain protein [K] COG0640 Predicted transcriptional regulators gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3998 CH63_3999 CH63_3999 CH63_3999 4385956 4386249 - hypothetical protein conserved hypothetical protein gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_3999 CH63_4 CH63_4 CH63_4 2385 3170 - ABC 3 transport family protein [P] COG1108 ABC-type Mn2+/Zn2+ transport systems%2C permease components gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4 CH63_40 CH63_40 CH63_40 35432 35707 - hypothetical protein conserved hypothetical protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_40 CH63_400 CH63_400 ail ail 423173 423712 - attachment invasion locus protein [M] COG3637 Opacity protein and related surface antigens gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_400 CH63_4000 CH63_4000 CH63_4000 4386755 4390726 - delta-1-pyrroline-5-carboxylate dehydrogenase D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase~[E] COG0506 Proline dehydrogenase gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4000 CH63_4001 CH63_4001 CH63_4001 4391098 4391268 + putative membrane protein gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4001 CH63_4002 CH63_4002 putP putP 4391298 4392782 + sodium/proline symporter na_Pro_sym: sodium/proline symporter~[ER] COG0591 Na+/proline symporter gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4002 CH63_4003 CH63_4003 CH63_4003 4393115 4393963 + iron permease FTR1 family protein [P] COG0672 High-affinity Fe2+/Pb2+ permease gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4003 CH63_4004 CH63_4004 CH63_4004 4393993 4395123 + imelysin family protein [P] COG2822 Predicted periplasmic lipoprotein involved in iron transport gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4004 CH63_4005 CH63_4005 CH63_4005 4395134 4396438 + Dyp-type peroxidase family protein dyp_perox_fam: Dyp-type peroxidase family protein~[P] COG2837 Predicted iron-dependent peroxidase gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4005 CH63_4006 CH63_4006 wrbA wrbA 4396524 4397123 - quinone oxidoreductase%2C type IV NAD(P)H:quinone oxidoreductase%2C type IV~flav_wrbA: NAD(P)H:quinone oxidoreductase%2C type IV~[R] COG0655 Multimeric flavodoxin WrbA gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4006 CH63_4007 CH63_4007 nanM nanM 4397517 4398695 + N-acetylneuraminate epimerase [S] COG3055 Uncharacterized protein conserved in bacteria gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4007 CH63_4008 CH63_4008 cycA cycA 4398821 4400236 - D-serine/D-alanine/glycine transporter [E] COG1113 Gamma-aminobutyrate permease and related permeases gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4008 CH63_4009 CH63_4009 CH63_4009 4400598 4400673 + tRNA-Lys tRNA gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4009 CH63_401 CH63_401 cls cls 424759 426219 + cardiolipin synthase bac_cardiolipin: cardiolipin synthase~[I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_401 CH63_4010 CH63_4010 ail ail 4401360 4401911 + attachment invasion locus protein [M] COG3637 Opacity protein and related surface antigens gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4010 CH63_4011 CH63_4011 CH63_4011 4402251 4402505 + putative membrane protein gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4011 CH63_4012 CH63_4012 CH63_4012 4402533 4402874 - glpM family protein [R] COG3136 Uncharacterized membrane protein required for alginate biosynthesis gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4012 CH63_4013 CH63_4013 CH63_4013 4403002 4403226 - hypothetical protein conserved hypothetical protein gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4013 CH63_4014 CH63_4014 CH63_4014 4403888 4404544 + bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4014 CH63_4015 CH63_4015 uvrC uvrC 4404537 4406369 + excinuclease ABC subunit C uvrC: excinuclease ABC subunit C~[L] COG0322 Nuclease subunit of the excinuclease complex gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4015 CH63_4016 CH63_4016 pgsA pgsA 4406428 4406976 + CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~[I] COG0558 Phosphatidylglycerophosphate synthase gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4016 CH63_4017 CH63_4017 CH63_4017 4407121 4407196 + tRNA-Gly tRNA gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4017 CH63_4018 CH63_4018 CH63_4018 4407249 4407322 + tRNA-Cys tRNA gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4018 CH63_4019 CH63_4019 CH63_4019 4407333 4407418 + tRNA-Leu tRNA gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4019 CH63_402 CH63_402 CH63_402 426384 426707 + hypothetical protein conserved hypothetical protein~[S] COG3099 Uncharacterized protein conserved in bacteria gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_402 CH63_4020 CH63_4020 CH63_4020 4407716 4408231 - phage integrase family protein [L] COG0582 Integrase gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4020 CH63_4021 CH63_4021 CH63_4021 4408342 4408569 + hypothetical protein dnaB-like helicase C terminal domain protein~[L] COG0305 Replicative DNA helicase gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4021 CH63_4022 CH63_4022 CH63_4022 4408962 4409084 + hypothetical protein gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4022 CH63_4023 CH63_4023 CH63_4023 4409329 4409502 + hypothetical protein conserved hypothetical protein gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4023 CH63_4024 CH63_4024 CH63_4024 4409694 4409876 + putative membrane protein gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4024 CH63_4025 CH63_4025 CH63_4025 4409906 4410121 - hypothetical protein conserved hypothetical protein gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4025 CH63_4026 CH63_4026 CH63_4026 4410147 4410491 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4026 CH63_4027 CH63_4027 CH63_4027 4410711 4411670 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4027 CH63_4028 CH63_4028 CH63_4028 4411742 4412161 - transposase family protein gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4028 CH63_4029 CH63_4029 CH63_4029 4412272 4412412 - putative gpF1 [R] COG3497 Phage tail sheath protein FI gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4029 CH63_403 CH63_403 CH63_403 427007 427222 - hypothetical protein conserved hypothetical protein gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_403 CH63_4030 CH63_4030 CH63_4030 4412577 4412855 - hypothetical protein conserved hypothetical protein gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4030 CH63_4031 CH63_4031 CH63_4031 4412836 4413141 - hypothetical protein conserved hypothetical protein gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4031 CH63_4032 CH63_4032 CH63_4032 4413138 4413353 - hypothetical protein conserved hypothetical protein gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4032 CH63_4033 CH63_4033 CH63_4033 4414092 4414391 - 25-like lysozyme family protein [R] COG3628 Phage baseplate assembly protein W gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4033 CH63_4034 CH63_4034 CH63_4034 4414388 4414642 - phage baseplate assembly V family protein phage_P2_V: phage baseplate assembly V family protein~[R] COG4540 Phage P2 baseplate assembly protein gpV gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4034 CH63_4035 CH63_4035 CH63_4035 4414778 4415050 + hypothetical protein conserved hypothetical protein~[S] COG2929 Uncharacterized protein conserved in bacteria gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4035 CH63_4036 CH63_4036 CH63_4036 4415031 4415321 + hypothetical protein conserved hypothetical protein~[S] COG3514 Uncharacterized protein conserved in bacteria gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4036 CH63_4037 CH63_4037 CH63_4037 4415387 4416463 + TIR domain protein gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4037 CH63_4038 CH63_4038 CH63_4038 4416511 4417371 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4038 CH63_4039 CH63_4039 CH63_4039 4417371 4417709 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4039 CH63_404 CH63_404 CH63_404 427783 428784 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[E] COG4608 ABC-type oligopeptide transport system%2C ATPase component gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_404 CH63_4040 CH63_4040 CH63_4040 4417766 4417939 - putative membrane protein gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4040 CH63_4041 CH63_4041 CH63_4041 4418127 4418696 - putative exported protein gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4041 CH63_4042 CH63_4042 CH63_4042 4418708 4419142 - hypothetical protein conserved hypothetical protein gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4042 CH63_4043 CH63_4043 CH63_4043 4419820 4419924 + putative transposase A putative iS1400 transposase A~[L] COG2801 Transposase and inactivated derivatives gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4043 CH63_4044 CH63_4044 CH63_4044 4419933 4420094 - hypothetical protein conserved hypothetical protein gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4044 CH63_4045 CH63_4045 CH63_4045 4420111 4420908 + UTRA domain protein [K] COG2188 Transcriptional regulators gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4045 CH63_4046 CH63_4046 CH63_4046 4421570 4422583 + oxidoreductase%2C NAD-binding Rossmann fold family protein [R] COG0673 Predicted dehydrogenases and related proteins gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4046 CH63_4047 CH63_4047 CH63_4047 4422613 4423881 + bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4047 CH63_4048 CH63_4048 CH63_4048 4423948 4424808 + binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4048 CH63_4049 CH63_4049 CH63_4049 4424801 4425628 + binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4049 CH63_405 CH63_405 CH63_405 428781 429782 - hypothetical protein oligo_HPY: oligopeptide/dipeptide ABC transporter%2C ATP-binding%2C C-terminal domain protein~[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_405 CH63_4050 CH63_4050 CH63_4050 4425653 4426543 + ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4050 CH63_4051 CH63_4051 CH63_4051 4426489 4426770 + TOBE domain protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4051 CH63_4052 CH63_4052 CH63_4052 4427020 4427205 - hypothetical protein conserved hypothetical protein gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4052 CH63_4053 CH63_4053 CH63_4053 4427683 4428705 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4053 CH63_4054 CH63_4054 CH63_4054 4428705 4429484 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4054 CH63_4055 CH63_4055 CH63_4055 4429682 4429915 - hypothetical protein gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4055 CH63_4056 CH63_4056 hutG hutG 4430029 4430835 - N-formylglutamate deformylase hutG_amidohyd: N-formylglutamate deformylase~[E] COG3741 N-formylglutamate amidohydrolase gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4056 CH63_4057 CH63_4057 hutI hutI 4430832 4432052 - imidazolonepropionase hutI: imidazolonepropionase~[Q] COG1228 Imidazolonepropionase and related amidohydrolases gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4057 CH63_4058 CH63_4058 hutC hutC 4432256 4433023 - histidine utilization repressor his_ut_repres: histidine utilization repressor~[K] COG2188 Transcriptional regulators gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4058 CH63_4059 CH63_4059 hutF hutF 4433171 4434541 + formiminoglutamate deiminase hutF: formiminoglutamate deiminase~[FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4059 CH63_406 CH63_406 oppC oppC 429794 430699 - oligopeptide transport system permease protein oppC [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_406 CH63_4060 CH63_4060 CH63_4060 4434541 4435113 + hutD family protein [S] COG3758 Uncharacterized protein conserved in bacteria gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4060 CH63_4061 CH63_4061 CH63_4061 4435291 4437255 - chorismate binding enzyme family protein [EH] COG0147 Anthranilate/para-aminobenzoate synthases component I gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4061 CH63_4062 CH63_4062 CH63_4062 4437892 4438401 + hypothetical protein thiolase%2C N-terminal domain protein~[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4062 CH63_4063 CH63_4063 CH63_4063 4438370 4438900 + 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4063 CH63_4064 CH63_4064 CH63_4064 4438914 4439930 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4064 CH63_4065 CH63_4065 CH63_4065 4439923 4440729 + metallo-beta-lactamase superfamily protein [R] COG0491 Zn-dependent hydrolases%2C including glyoxylases gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4065 CH63_4066 CH63_4066 CH63_4066 4440726 4442012 + putative adenylate-forming enzyme [H] COG1541 Coenzyme F390 synthetase gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4066 CH63_4067 CH63_4067 CH63_4067 4442146 4443108 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0451 Nucleoside-diphosphate-sugar epimerases gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4067 CH63_4068 CH63_4068 CH63_4068 4443108 4444262 + glycosyl transferase 21 family protein gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4068 CH63_4069 CH63_4069 CH63_4069 4444259 4444843 + hypothetical protein conserved hypothetical protein gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4069 CH63_407 CH63_407 oppB oppB 430718 431638 - oligopeptide transport system permease protein oppB [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_407 CH63_4070 CH63_4070 CH63_4070 4444840 4446027 + UDP-glucoronosyl and UDP-glucosyl transferase family protein [GC] COG1819 Glycosyl transferases%2C related to UDP-glucuronosyltransferase gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4070 CH63_4071 CH63_4071 CH63_4071 4446188 4446652 - putative exported protein gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4071 CH63_4072 CH63_4072 CH63_4072 4446822 4448480 - hypothetical protein conserved hypothetical protein gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4072 CH63_4073 CH63_4073 CH63_4073 4448599 4449807 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4073 CH63_4074 CH63_4074 CH63_4074 4449927 4452089 - sel1 repeat family protein [S] COG2849 Uncharacterized protein conserved in bacteria gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4074 CH63_4075 CH63_4075 CH63_4075 4452304 4452462 + hypothetical protein conserved hypothetical protein gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4075 CH63_4076 CH63_4076 CH63_4076 4452667 4454778 + hypothetical protein conserved hypothetical protein gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4076 CH63_4077 CH63_4077 CH63_4077 4455025 4455663 + ribose/Galactose Isomerase family protein [G] COG0698 Ribose 5-phosphate isomerase RpiB gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4077 CH63_4078 CH63_4078 CH63_4078 4455798 4456457 - methyltransferase small domain protein [QR] COG0500 SAM-dependent methyltransferases gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4078 CH63_4079 CH63_4079 CH63_4079 4456562 4457242 - short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4079 CH63_408 CH63_408 oppA3 oppA3 431725 433362 - periplasmic oligopeptide-binding protein [E] COG4166 ABC-type oligopeptide transport system%2C periplasmic component gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_408 CH63_4080 CH63_4080 CH63_4080 4457394 4457537 - hypothetical protein conserved hypothetical protein gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4080 CH63_4081 CH63_4081 CH63_4081 4457583 4458533 - hypothetical protein conserved hypothetical protein gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4081 CH63_4082 CH63_4082 CH63_4082 4458520 4459452 - hypothetical protein conserved hypothetical protein gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4082 CH63_4083 CH63_4083 CH63_4083 4459458 4460363 - HEAT repeats family protein gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4083 CH63_4084 CH63_4084 CH63_4084 4461154 4462227 - alpha/beta hydrolase family protein gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4084 CH63_4085 CH63_4085 CH63_4085 4462440 4462910 - araC-like ligand binding domain protein [S] COG1917 Uncharacterized conserved protein%2C contains double-stranded beta-helix domain gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4085 CH63_4086 CH63_4086 CH63_4086 4462965 4463384 - carboxymuconolactone decarboxylase family protein [S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4086 CH63_4087 CH63_4087 CH63_4087 4463664 4465049 - heavy metal sensor kinase family protein cztS_silS_copS: heavy metal sensor kinase family protein~[T] COG0642 Signal transduction histidine kinase gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4087 CH63_4088 CH63_4088 CH63_4088 4465061 4465753 - response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4088 CH63_4089 CH63_4089 CH63_4089 4466018 4467109 + X-Pro dipeptidyl-peptidase family protein [R] COG1073 Hydrolases of the alpha/beta superfamily gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4089 CH63_409 CH63_409 CH63_409 434200 434844 - marC integral membrane family protein [U] COG2095 Multiple antibiotic transporter gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_409 CH63_4090 CH63_4090 CH63_4090 4467300 4467965 + NADPH-dependent FMN reductase family protein [C] COG0716 Flavodoxins gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4090 CH63_4091 CH63_4091 CH63_4091 4467980 4468675 + hypothetical protein conserved hypothetical protein gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4091 CH63_4092 CH63_4092 CH63_4092 4468884 4469726 - hypothetical protein conserved hypothetical protein gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4092 CH63_4093 CH63_4093 CH63_4093 4470357 4471013 + hypothetical protein conserved hypothetical protein gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4093 CH63_4094 CH63_4094 CH63_4094 4471010 4471840 + alpha/beta hydrolase fold family protein [I] COG0657 Esterase/lipase gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4094 CH63_4095 CH63_4095 CH63_4095 4471848 4472246 + rhodanese-like domain protein [P] COG0607 Rhodanese-related sulfurtransferase gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4095 CH63_4096 CH63_4096 CH63_4096 4472294 4472803 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4096 CH63_4097 CH63_4097 CH63_4097 4472821 4473009 - putative iSPsy11%2C transposase OrfA gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4097 CH63_4098 CH63_4098 engD engD 4473432 4474523 - GTP-dependent nucleic acid-binding protein engD [J] COG0012 Predicted GTPase%2C probable translation factor gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4098 CH63_4099 CH63_4099 pth pth 4474687 4475277 - aminoacyl-tRNA hydrolase pth: aminoacyl-tRNA hydrolase~[J] COG0193 Peptidyl-tRNA hydrolase gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4099 CH63_41 CH63_41 CH63_41 35226 35435 + hypothetical protein gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_41 CH63_410 CH63_410 CH63_410 435651 438326 + aldehyde dehydrogenase family protein [C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_410 CH63_4100 CH63_4100 CH63_4100 4475639 4475911 + hypothetical protein conserved hypothetical protein gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4100 CH63_4101 CH63_4101 prs prs 4476113 4477060 - ribose-phosphate pyrophosphokinase [FE] COG0462 Phosphoribosylpyrophosphate synthetase gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4101 CH63_4102 CH63_4102 ispE ispE 4477401 4478240 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase~[I] COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4102 CH63_4103 CH63_4103 lolB lolB 4478302 4478925 - outer membrane lipoprotein LolB lolB: outer membrane lipoprotein LolB~[M] COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4103 CH63_4104 CH63_4104 hemA hemA 4479231 4480493 + glutamyl-tRNA reductase hemA: glutamyl-tRNA reductase~[H] COG0373 Glutamyl-tRNA reductase gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4104 CH63_4105 CH63_4105 prfA prfA 4480526 4481608 + peptide chain release factor 1 prfA: peptide chain release factor 1~[J] COG0216 Protein chain release factor A gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4105 CH63_4106 CH63_4106 prmC prmC 4481608 4482438 + protein-(glutamine-N5) methyltransferase%2C release factor-specific RF_mod_PrmC: protein-(glutamine-N5) methyltransferase%2C release factor-specific~[J] COG2890 Methylase of polypeptide chain release factors gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4106 CH63_4107 CH63_4107 CH63_4107 4482502 4482903 + invasion expression up-regulator%2C SirB family protein [S] COG3094 Uncharacterized protein conserved in bacteria gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4107 CH63_4108 CH63_4108 CH63_4108 4482900 4483709 + tetratricopeptide repeat family protein [S] COG2912 Uncharacterized conserved protein gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4108 CH63_4109 CH63_4109 kdsA kdsA 4483805 4484659 + 3-deoxy-8-phosphooctulonate synthase KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase~[M] COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4109 CH63_411 CH63_411 CH63_411 438866 439105 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_411 CH63_4110 CH63_4110 sulP sulP 4485014 4486711 - sulfate permease family protein sulP: sulfate permease family protein~[P] COG0659 Sulfate permease and related transporters (MFS superfamily) gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4110 CH63_4112 CH63_4112 CH63_4112 4487548 4487637 - tRNA-Ser tRNA gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4112 CH63_4113 CH63_4113 CH63_4113 4487779 4488519 - glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4113 CH63_4114 CH63_4114 CH63_4114 4488954 4490036 - bacterial extracellular solute-binding family protein [R] COG4134 ABC-type uncharacterized transport system%2C periplasmic component gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4114 CH63_4115 CH63_4115 CH63_4115 4490056 4490892 - binding--dependent transport system inner membrane component family protein [E] COG1177 ABC-type spermidine/putrescine transport system%2C permease component II gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4115 CH63_4116 CH63_4116 CH63_4116 4490889 4491755 - binding--dependent transport system inner membrane component family protein [E] COG1176 ABC-type spermidine/putrescine transport system%2C permease component I gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4116 CH63_4117 CH63_4117 CH63_4117 4491752 4492819 - ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4117 CH63_4118 CH63_4118 CH63_4118 4493034 4493864 + glycerophosphoryl diester phosphodiesterase family protein [C] COG0584 Glycerophosphoryl diester phosphodiesterase gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4118 CH63_4119 CH63_4119 CH63_4119 4493878 4494993 + ROK family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4119 CH63_412 CH63_412 CH63_412 439310 439648 + integrase core domain protein [L] COG4584 Transposase and inactivated derivatives gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_412 CH63_4120 CH63_4120 CH63_4120 4495250 4495339 - tRNA-Ser tRNA gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4120 CH63_4121 CH63_4121 CH63_4121 4495628 4496365 + PHP domain protein [ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4121 CH63_4122 CH63_4122 CH63_4122 4496402 4496962 + nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4122 CH63_4123 CH63_4123 CH63_4123 4497416 4497979 - hypothetical protein conserved hypothetical protein gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4123 CH63_4124 CH63_4124 CH63_4124 4498374 4499579 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4124 CH63_4125 CH63_4125 CH63_4125 4499873 4500457 + acetyltransferase family protein [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4125 CH63_4126 CH63_4126 CH63_4126 4500465 4502076 + oxidoreductase%2C NAD-binding Rossmann fold family protein pseudogene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4126 CH63_4128 CH63_4128 mviN mviN 4502343 4503878 + murein biosynthesis integral membrane protein MurJ murJ_mviN: murein biosynthesis integral membrane protein MurJ~[R] COG0728 Uncharacterized membrane protein%2C putative virulence factor gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4128 CH63_4129 CH63_4129 shlB shlB 4504358 4506019 + hemolysin transporter protein shlB [U] COG2831 Hemolysin activation/secretion protein gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4129 CH63_413 CH63_413 CH63_413 439608 439886 + putative transposase Orf A%2C insertion element IS100 [L] COG4584 Transposase and inactivated derivatives gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_413 CH63_4130 CH63_4130 CH63_4130 4506049 4510779 + hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4130 CH63_4131 CH63_4131 argS argS 4511010 4512740 - arginine--tRNA ligase argS: arginine--tRNA ligase~[J] COG0018 Arginyl-tRNA synthetase gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4131 CH63_4132 CH63_4132 CH63_4132 4513355 4513930 + yecM family protein [S] COG3102 Uncharacterized protein conserved in bacteria gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4132 CH63_4133 CH63_4133 CH63_4133 4514292 4514927 + cutC family protein [P] COG3142 Uncharacterized protein involved in copper resistance gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4133 CH63_4134 CH63_4134 cmoB cmoB 4515120 4516091 - tRNA (mo5U34)-methyltransferase [QR] COG0500 SAM-dependent methyltransferases gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4134 CH63_4135 CH63_4135 cmoA cmoA 4516088 4516891 - tRNA (cmo5U34)-methyltransferase [QR] COG0500 SAM-dependent methyltransferases gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4135 CH63_4136 CH63_4136 yecN yecN 4517082 4517477 - inner membrane protein yecN [R] COG3788 Uncharacterized relative of glutathione S-transferase%2C MAPEG superfamily gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4136 CH63_4137 CH63_4137 CH63_4137 4517657 4518472 - hypothetical protein conserved hypothetical protein~[S] COG1801 Uncharacterized conserved protein gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4137 CH63_4138 CH63_4138 aspS aspS 4519530 4521326 + aspartate--tRNA ligase aspS_bact: aspartate--tRNA ligase~[J] COG0173 Aspartyl-tRNA synthetase gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4138 CH63_4139 CH63_4139 CH63_4139 4521326 4521769 + NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4139 CH63_414 CH63_414 CH63_414 439886 440665 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_414 CH63_4140 CH63_4140 CH63_4140 4521827 4522570 + DNA-binding regulatory%2C YebC/PmpR family protein [S] COG0217 Uncharacterized conserved protein gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4140 CH63_4141 CH63_4141 parA parA 671 1876 - plasmid partition protein A [D] COG1192 ATPases involved in chromosome partitioning gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4141 CH63_4142 CH63_4142 CH63_4142 2178 2405 + antitoxin Phd YefM%2C type II toxin-antitoxin system family protein gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4142 CH63_4143 CH63_4143 CH63_4143 2405 2731 + plasmid stabilization system family protein [R] COG3668 Plasmid stabilization system protein gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4143 CH63_4144 CH63_4144 CH63_4144 2931 3551 + hypothetical protein resolvase%2C N terminal domain protein~[L] COG1961 Site-specific recombinases%2C DNA invertase Pin homologs gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4144 CH63_4145 CH63_4145 CH63_4145 3617 4558 + hypothetical protein T_den_put_tspse: conserved hypothetical family protein~[S] COG5464 Uncharacterized conserved protein gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4145 CH63_4146 CH63_4146 CH63_4146 4581 4856 - hypothetical protein gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4146 CH63_4147 CH63_4147 CH63_4147 5595 6083 + PLD-like domain protein [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4147 CH63_4148 CH63_4148 CH63_4148 6161 7924 + phospholipase D family protein gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4148 CH63_4149 CH63_4149 CH63_4149 10000 11022 - transposase family protein [L] COG3547 Transposase and inactivated derivatives gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4149 CH63_415 CH63_415 CH63_415 440768 440941 - hypothetical protein conserved hypothetical protein gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_415 CH63_4150 CH63_4150 CH63_4150 11491 12699 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4150 CH63_4151 CH63_4151 CH63_4151 12733 13455 - hypothetical protein conserved hypothetical protein gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4151 CH63_4152 CH63_4152 CH63_4152 13708 14502 + hypothetical protein conserved hypothetical protein gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4152 CH63_4153 CH63_4153 CH63_4153 14584 15060 + hypothetical protein conserved hypothetical protein gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4153 CH63_4154 CH63_4154 CH63_4154 15095 15448 + hypothetical protein conserved hypothetical protein gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4154 CH63_4155 CH63_4155 CH63_4155 15462 16484 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4155 CH63_4156 CH63_4156 CH63_4156 16484 17263 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4156 CH63_4157 CH63_4157 CH63_4157 17393 18001 - caudovirales tail fiber assembly family protein gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4157 CH63_4158 CH63_4158 CH63_4158 18094 18306 - hypothetical protein conserved hypothetical protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4158 CH63_4159 CH63_4159 CH63_4159 18303 21191 - phage tail fiber repeat family protein gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4159 CH63_416 CH63_416 CH63_416 441232 441465 - hypothetical protein conserved hypothetical protein gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_416 CH63_4160 CH63_4160 CH63_4160 21272 21889 - hypothetical protein conserved hypothetical protein gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4160 CH63_4161 CH63_4161 CH63_4161 21907 26538 - fibronectin type III domain protein [S] COG4733 Phage-related protein%2C tail component gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4161 CH63_4162 CH63_4162 CH63_4162 26560 27147 - putative phage tail assembly protein [S] COG4723 Phage-related protein%2C tail component gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4162 CH63_4163 CH63_4163 CH63_4163 27135 27932 - hypothetical protein conserved hypothetical protein~[R] COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4163 CH63_4164 CH63_4164 CH63_4164 27925 28623 - phage minor tail protein L phage_tail_L: phage minor tail protein L~[S] COG4672 Phage-related protein gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4164 CH63_4165 CH63_4165 CH63_4165 28713 29048 - phage minor tail family protein [S] COG4718 Phage-related protein gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4165 CH63_4166 CH63_4166 CH63_4166 29090 33667 - tape measure domain protein tape_meas_nterm: tape measure domain protein~[S] COG5281 Phage-related minor tail protein gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4166 CH63_4167 CH63_4167 CH63_4167 33675 33908 - hypothetical protein conserved hypothetical protein gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4167 CH63_4168 CH63_4168 CH63_4168 34025 34342 - hypothetical protein conserved hypothetical protein gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4168 CH63_4169 CH63_4169 CH63_4169 34402 35148 - bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4169 CH63_417 CH63_417 CH63_417 441620 442876 - patatin-like phospholipase family protein gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_417 CH63_4170 CH63_4170 CH63_4170 35223 35606 - hypothetical protein conserved hypothetical protein gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4170 CH63_4171 CH63_4171 CH63_4171 35608 36081 - hypothetical protein conserved hypothetical protein gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4171 CH63_4172 CH63_4172 CH63_4172 36072 36416 - hypothetical protein conserved hypothetical protein gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4172 CH63_4173 CH63_4173 CH63_4173 36514 37347 - hypothetical protein conserved hypothetical protein gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4173 CH63_4174 CH63_4174 CH63_4174 37347 37781 - hypothetical protein conserved hypothetical protein gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4174 CH63_4175 CH63_4175 CH63_4175 37825 38487 - bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4175 CH63_4176 CH63_4176 CH63_4176 38562 39437 - hypothetical protein conserved hypothetical protein gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4176 CH63_4177 CH63_4177 CH63_4177 39464 40364 - hypothetical protein pseudogene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4177 CH63_4179 CH63_4179 CH63_4179 40387 41961 - hypothetical protein conserved hypothetical protein gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4179 CH63_418 CH63_418 CH63_418 443269 443517 - hypothetical protein conserved hypothetical protein gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_418 CH63_4180 CH63_4180 CH63_4180 41995 43251 - phage terminase large subunit gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4180 CH63_4181 CH63_4181 CH63_4181 43254 43895 - putative dNA-binding protein gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4181 CH63_4182 CH63_4182 CH63_4182 44091 44357 - hypothetical protein conserved hypothetical protein gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4182 CH63_4183 CH63_4183 CH63_4183 44367 45257 - hypothetical protein conserved hypothetical protein~[R] COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4183 CH63_4184 CH63_4184 CH63_4184 45263 45517 - hypothetical protein conserved hypothetical protein gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4184 CH63_4185 CH63_4185 CH63_4185 45510 46148 - ABC transporter family protein [R] COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4185 CH63_4186 CH63_4186 CH63_4186 46145 46813 - parB-like nuclease domain protein [K] COG1475 Predicted transcriptional regulators gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4186 CH63_4187 CH63_4187 CH63_4187 46813 47493 - parB-like nuclease domain protein [K] COG1475 Predicted transcriptional regulators gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4187 CH63_4188 CH63_4188 CH63_4188 47576 49135 + DEAD/DEAH box helicase family protein [KL] COG1061 DNA or RNA helicases of superfamily II gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4188 CH63_4189 CH63_4189 CH63_4189 49138 49416 + hypothetical protein conserved hypothetical protein gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4189 CH63_419 CH63_419 CH63_419 444082 444276 + hypothetical protein conserved hypothetical protein gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_419 CH63_4190 CH63_4190 CH63_4190 49476 49898 + putative lipoprotein gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4190 CH63_4191 CH63_4191 CH63_4191 49903 50430 + repressor of phase-1 flagellin family protein gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4191 CH63_4192 CH63_4192 CH63_4192 50754 51404 + hypothetical protein conserved hypothetical protein gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4192 CH63_4193 CH63_4193 CH63_4193 51489 51716 + hypothetical protein conserved hypothetical protein gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4193 CH63_4194 CH63_4194 CH63_4194 51826 52284 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4194 CH63_4195 CH63_4195 CH63_4195 52493 53062 - hypothetical protein conserved hypothetical protein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4195 CH63_4196 CH63_4196 CH63_4196 53075 53821 - hypothetical protein conserved hypothetical protein gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4196 CH63_4197 CH63_4197 CH63_4197 53811 55727 - ABC transporter family protein [L] COG0419 ATPase involved in DNA repair gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4197 CH63_4198 CH63_4198 CH63_4198 55736 55885 - hypothetical protein conserved hypothetical protein gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4198 CH63_4199 CH63_4199 CH63_4199 55957 57042 - calcineurin-like phosphoesterase family protein [L] COG0420 DNA repair exonuclease gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4199 CH63_42 CH63_42 locus17 locus17 36180 36692 + lysozyme [R] COG3772 Phage-related lysozyme (muraminidase) gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_42 CH63_420 CH63_420 alr alr 444678 445907 + alanine racemase alr: alanine racemase~[M] COG0787 Alanine racemase gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_420 CH63_4200 CH63_4200 CH63_4200 57458 58480 + bacterial extracellular solute-binding s%2C 3 family protein [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems%2C periplasmic components gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4200 CH63_4201 CH63_4201 CH63_4201 58840 59484 - hypothetical protein conserved hypothetical protein gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4201 CH63_4202 CH63_4202 repB repB 60229 61293 + repFIB replication protein A gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4202 CH63_4203 CH63_4203 CH63_4203 61862 62074 - hypothetical protein conserved hypothetical protein gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4203 CH63_4204 CH63_4204 CH63_4204 62074 62409 - putative periplasmic protein gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4204 CH63_4205 CH63_4205 CH63_4205 62626 62901 - hypothetical protein conserved hypothetical protein gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4205 CH63_4206 CH63_4206 CH63_4206 62969 63379 - hypothetical protein conserved hypothetical protein gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4206 CH63_4207 CH63_4207 CH63_4207 63363 63734 - hypothetical protein conserved hypothetical protein gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4207 CH63_4208 CH63_4208 CH63_4208 63888 64718 - SPFH domain / Band 7 family protein [O] COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4208 CH63_4209 CH63_4209 CH63_4209 64722 64922 - putative membrane protein gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4209 CH63_421 CH63_421 CH63_421 446053 446226 - putative membrane protein gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_421 CH63_4210 CH63_4210 CH63_4210 65013 66089 - recA bacterial DNA recombination family protein [L] COG0468 RecA/RadA recombinase gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4210 CH63_4211 CH63_4211 CH63_4211 66092 66358 - hypothetical protein gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4211 CH63_4212 CH63_4212 CH63_4212 66358 67302 - hypothetical protein 5'-3' exonuclease%2C C-terminal SAM fold family protein~[L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI) gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4212 CH63_4213 CH63_4213 CH63_4213 67363 68391 - hypothetical protein conserved hypothetical protein gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4213 CH63_4214 CH63_4214 CH63_4214 68511 68942 - hypothetical protein conserved hypothetical protein gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4214 CH63_4215 CH63_4215 CH63_4215 69163 69414 + hypothetical protein conserved hypothetical protein gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4215 CH63_4216 CH63_4216 CH63_4216 69487 70050 + putative dNA-binding protein gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4216 CH63_4217 CH63_4217 CH63_4217 70080 70523 - hypothetical protein conserved hypothetical protein gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4217 CH63_4218 CH63_4218 dnaE dnaE 70520 74044 - DNA polymerase III%2C alpha subunit polc: DNA polymerase III%2C alpha subunit~[L] COG0587 DNA polymerase III%2C alpha subunit gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4218 CH63_4219 CH63_4219 CH63_4219 74225 75460 - AAA domain family protein [R] COG0714 MoxR-like ATPases gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4219 CH63_422 CH63_422 CH63_422 446526 447479 - putative exported protein gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_422 CH63_4220 CH63_4220 CH63_4220 75557 77923 - cobalamin biosynthesis CobT family protein [H] COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5%2C 6-dimethylbenzimidazole phosphoribosyltransferase) gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4220 CH63_4221 CH63_4221 CH63_4221 78033 78245 - hypothetical protein conserved hypothetical protein gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4221 CH63_4222 CH63_4222 CH63_4222 78889 79992 - phage integrase family protein [L] COG0582 Integrase gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4222 CH63_4223 CH63_4223 CH63_4223 78508 78894 + hypothetical protein conserved hypothetical protein gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4223 CH63_4224 CH63_4224 caf1 caf1 80752 81264 - F1 capsule antigen gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4224 CH63_4225 CH63_4225 caf1A caf1A 81345 83846 - F1 capsule-anchoring protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4225 CH63_4226 CH63_4226 caf1M caf1M 83871 84647 - chaperone protein caf1M [NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4226 CH63_4227 CH63_4227 CH63_4227 85119 85880 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4227 CH63_4228 CH63_4228 CH63_4228 86395 86700 - putative c-type natriuretic protein gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4228 CH63_4229 CH63_4229 CH63_4229 86697 86849 - hypothetical protein conserved hypothetical protein gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4229 CH63_423 CH63_423 CH63_423 447579 448013 - hypothetical protein yadA-like C-terminal region family protein~[UW] COG5295 Autotransporter adhesin gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_423 CH63_4230 CH63_4230 CH63_4230 86846 87061 - hypothetical protein conserved hypothetical protein gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4230 CH63_4231 CH63_4231 CH63_4231 87045 87221 - hypothetical protein conserved hypothetical protein gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4231 CH63_4232 CH63_4232 CH63_4232 87221 88258 - ATP dependent DNA ligase domain protein gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4232 CH63_4233 CH63_4233 CH63_4233 88334 89113 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4233 CH63_4234 CH63_4234 CH63_4234 89113 90135 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4234 CH63_4235 CH63_4235 CH63_4235 90259 92268 - parB-like nuclease domain protein [K] COG1475 Predicted transcriptional regulators gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4235 CH63_4236 CH63_4236 CH63_4236 92341 92571 - hypothetical protein conserved hypothetical protein gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4236 CH63_4237 CH63_4237 CH63_4237 93284 93790 - antirestriction family protein [R] COG4734 Antirestriction protein gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4237 CH63_4238 CH63_4238 CH63_4238 94189 94968 - putative ychA gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4238 CH63_4239 CH63_4239 CH63_4239 95022 95441 - hypothetical protein conserved hypothetical protein gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4239 CH63_424 CH63_424 CH63_424 448000 450210 - coiled stalk of trimeric autotransporter adhesin family protein [UW] COG5295 Autotransporter adhesin gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_424 CH63_4240 CH63_4240 CH63_4240 95452 95673 - hypothetical protein conserved hypothetical protein gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4240 CH63_4241 CH63_4241 CH63_4241 95673 96350 - DNA methylase family protein [L] COG0863 DNA modification methylase gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4241 CH63_4242 CH63_4242 CH63_4242 96851 97051 + hypothetical protein gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4242 CH63_4243 CH63_4243 CH63_4243 97213 98604 - archaeal ATPase family protein [R] COG1672 Predicted ATPase (AAA+ superfamily) gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4243 CH63_4244 CH63_4244 CH63_4244 98989 99285 - parB family protein [K] COG1475 Predicted transcriptional regulators gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4244 CH63_4245 CH63_4245 CH63_4245 163 462 - plasmid stabilization system family protein [R] COG3668 Plasmid stabilization system protein gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4245 CH63_4246 CH63_4246 CH63_4246 455 697 - hypothetical protein conserved hypothetical protein~[K] COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4246 CH63_4247 CH63_4247 CH63_4247 1543 1836 - hypothetical protein conserved hypothetical protein gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4247 CH63_4248 CH63_4248 sopB sopB 1959 2924 - protein sopB [K] COG1475 Predicted transcriptional regulators gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4248 CH63_4249 CH63_4249 CH63_4249 2921 4087 - merR HTH regulatory family protein [D] COG1192 ATPases involved in chromosome partitioning gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4249 CH63_425 CH63_425 CH63_425 450567 451331 - N-acetylmuramoyl-L-alanine amidase family protein [V] COG3023 Negative regulator of beta-lactamase expression gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_425 CH63_4250 CH63_4250 CH63_4250 4703 4834 + site-specific recombinase%2C phage integrase family [L] COG2801 Transposase and inactivated derivatives gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4250 CH63_4251 CH63_4251 CH63_4251 4887 5081 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4251 CH63_4252 CH63_4252 CH63_4252 5193 5651 - HTH-like domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4252 CH63_4253 CH63_4253 CH63_4253 5675 5992 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4253 CH63_4254 CH63_4254 CH63_4254 6099 6716 - enterobacterial TraT complement resistance family protein gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4254 CH63_4255 CH63_4255 CH63_4255 7326 7874 - putative protein yopQ gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4255 CH63_4256 CH63_4256 yopT yopT 8374 9342 + cysteine protease yopT gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4256 CH63_4257 CH63_4257 sycT sycT 9342 9740 + chaperone protein sycT gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4257 CH63_4258 CH63_4258 CH63_4258 9784 10095 - hypothetical protein conserved hypothetical protein gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4258 CH63_4259 CH63_4259 CH63_4259 10445 10864 + hypothetical protein conserved hypothetical protein gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4259 CH63_426 CH63_426 CH63_426 451902 452546 - chemotaxis phosphatase%2C CheZ family protein [NT] COG3143 Chemotaxis protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_426 CH63_4260 CH63_4260 CH63_4260 11842 12057 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4260 CH63_4261 CH63_4261 yopM yopM 12100 13329 - outer membrane protein yopM [S] COG4886 Leucine-rich repeat (LRR) protein gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4261 CH63_4262 CH63_4262 api41 api41 14690 14857 + transposase domain protein [L] COG3328 Transposase and inactivated derivatives gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4262 CH63_4263 CH63_4263 yopD yopD 15270 16190 - protein yopD gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4263 CH63_4264 CH63_4264 yopB yopB 16209 17414 - protein yopB [S] COG5613 Uncharacterized conserved protein gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4264 CH63_4265 CH63_4265 CH63_4265 17392 17898 - type III secretion low calcium response chaperone LcrH/SycD lcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD~[R] COG0457 FOG: TPR repeat gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4265 CH63_4266 CH63_4266 lcrV lcrV 17911 18891 - virulence-associated V antigen gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4266 CH63_4267 CH63_4267 CH63_4267 18893 19180 - type III secretion protein LcrG lcrG_PcrG: type III secretion protein LcrG gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4267 CH63_4268 CH63_4268 CH63_4268 19222 19659 - type III secretion system regulator LcrR lcrR: type III secretion system regulator LcrR gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4268 CH63_4269 CH63_4269 CH63_4269 19659 21773 - type III secretion%2C HrcV family protein hrcV: type III secretion%2C HrcV family protein~[U] COG4789 Type III secretory pathway%2C component EscV gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4269 CH63_427 CH63_427 cheY cheY 452556 452945 - chemotaxis protein CheY [T] COG0784 FOG: CheY-like receiver gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_427 CH63_4270 CH63_4270 CH63_4270 21760 22104 - tetratricopeptide repeat family protein gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4270 CH63_4271 CH63_4271 CH63_4271 22101 22469 - type III secretion protein%2C YscX family type_III_YscX: type III secretion protein%2C YscX family gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4271 CH63_4272 CH63_4272 sycN sycN 22466 22837 - type III secretion chaperone SycN type_III_SycN: type III secretion chaperone SycN gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4272 CH63_4273 CH63_4273 CH63_4273 22824 23102 - type III secretion effector delivery regulator%2C TyeA family type_III_tyeA: type III secretion effector delivery regulator%2C TyeA family gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4273 CH63_4274 CH63_4274 CH63_4274 23083 23964 - type III secretion regulator YopN/LcrE/InvE/MxiC lcrE: type III secretion regulator YopN/LcrE/InvE/MxiC gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4274 CH63_4275 CH63_4275 CH63_4275 24162 25481 + type III secretion apparatus H+-transporting two-sector ATPase III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase~[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4275 CH63_4276 CH63_4276 CH63_4276 25478 25942 + type III secretion YscO family protein gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4276 CH63_4277 CH63_4277 CH63_4277 25942 27309 + type III secretion system needle length determinant type_III_yscP: type III secretion system needle length determinant gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4277 CH63_4278 CH63_4278 epaO epaO 27306 28229 + type III secretion apparatus protein%2C YscQ/HrcQ family spaO_YscQ: type III secretion apparatus protein%2C YscQ/HrcQ family~[NU] COG1886 Flagellar motor switch/type III secretory pathway protein gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4278 CH63_4279 CH63_4279 epaP epaP 28226 28879 + type III secretion apparatus protein%2C YscR/HrcR family yscR: type III secretion apparatus protein%2C YscR/HrcR family~[U] COG4790 Type III secretory pathway%2C component EscR gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4279 CH63_428 CH63_428 CH63_428 453046 454095 - cheB methylesterase family protein [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_428 CH63_4280 CH63_4280 CH63_4280 28881 29147 + type III secretion%2C HrpO family protein fliQ_rel_III: type III secretion%2C HrpO family protein~[U] COG4794 Type III secretory pathway%2C component EscS gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4280 CH63_4281 CH63_4281 epaR epaR 29144 29929 + type III secretion apparatus protein SpaR/YscT/HrcT fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT~[U] COG4791 Type III secretory pathway%2C component EscT gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4281 CH63_4282 CH63_4282 yscU yscU 29929 30993 + yop s translocation protein U [U] COG4792 Type III secretory pathway%2C component EscU gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4282 CH63_4283 CH63_4283 CH63_4283 31569 31964 + type III secretion system chaperone YscW yscW: type III secretion system chaperone YscW gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4283 CH63_4284 CH63_4284 CH63_4284 32088 32903 + helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4284 CH63_4285 CH63_4285 CH63_4285 33306 33719 + type III secretion system chaperone%2C YscB family type_III_yscB: type III secretion system chaperone%2C YscB family gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4285 CH63_4286 CH63_4286 CH63_4286 33725 34381 + bacterial type II/III secretion system short domain protein [NU] COG1450 Type II secretory pathway%2C component PulD gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4286 CH63_4287 CH63_4287 CH63_4287 34375 35547 + type III secretion outer membrane pore%2C YscC/HrcC family type_III_yscC: type III secretion outer membrane pore%2C YscC/HrcC family~[NU] COG1450 Type II secretory pathway%2C component PulD gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4287 CH63_4288 CH63_4288 CH63_4288 35544 36803 + type III secretion apparatus protein%2C YscD/HrpQ family type_III_yscD: type III secretion apparatus protein%2C YscD/HrpQ family gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4288 CH63_4289 CH63_4289 CH63_4289 36800 37000 + hypothetical protein conserved hypothetical protein gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4289 CH63_429 CH63_429 cheR cheR 454095 454967 - chemotaxis protein methyltransferase [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_429 CH63_4290 CH63_4290 eprI eprI 37001 37264 + type III secretion apparatus needle protein III_needle: type III secretion apparatus needle protein gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4290 CH63_4291 CH63_4291 CH63_4291 37266 37613 + type III secretion protein%2C YscG family type_III_yscG: type III secretion protein%2C YscG family gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4291 CH63_4292 CH63_4292 CH63_4292 37610 38107 + type III secretion effector%2C YopR family type_III_yopR: type III secretion effector%2C YopR family gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4292 CH63_4293 CH63_4293 CH63_4293 38108 38455 + hypothetical protein yscI_hrpB_dom: type III secretion apparatus protein%2C YscI/HrpB%2C C-terminal domain gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4293 CH63_4294 CH63_4294 CH63_4294 38501 39196 + type III secretion apparatus lipoprotein%2C YscJ/HrcJ family III_secr_YscJ: type III secretion apparatus lipoprotein%2C YscJ/HrcJ family~[U] COG4669 Type III secretory pathway%2C lipoprotein EscJ gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4294 CH63_4295 CH63_4295 CH63_4295 39199 39825 + YOP s translocation K family protein gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4295 CH63_4296 CH63_4296 CH63_4296 39804 40436 + type III secretion apparatus protein%2C HrpE/YscL family hrpE_YscL_not: type III secretion apparatus protein%2C HrpE/YscL family~[NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4296 CH63_4297 CH63_4297 yscM2 yscM2 40661 41008 + regulatory protein YscM2 gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4297 CH63_4298 CH63_4298 CH63_4298 41556 41822 + transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4298 CH63_4299 CH63_4299 CH63_4299 41858 42280 + putative transposase insK for insertion sequence element IS150 [L] COG2801 Transposase and inactivated derivatives gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4299 CH63_43 CH63_43 CH63_43 36677 37135 + bacteriophage Rz lysis family protein gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_43 CH63_430 CH63_430 CH63_430 455140 456750 - hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_430 CH63_4300 CH63_4300 CH63_4300 42277 42585 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4300 CH63_4301 CH63_4301 CH63_4301 42720 42854 + putative yPCD1.66 protein gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4301 CH63_4302 CH63_4302 yopH yopH 43097 44503 - tyrosine-protein phosphatase yopH gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4302 CH63_4303 CH63_4303 CH63_4303 45124 45600 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4303 CH63_4304 CH63_4304 yopJ yopJ 46186 47052 - effector protein yopJ gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4304 CH63_4305 CH63_4305 CH63_4305 47448 48221 - rac1-binding domain protein [RTKL] COG0515 Serine/threonine protein kinase gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4305 CH63_4306 CH63_4306 ypkA ypkA 48179 49645 - protein kinase ypkA [RTKL] COG0515 Serine/threonine protein kinase gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4306 CH63_4307 CH63_4307 CH63_4307 49653 50102 - tir chaperone family protein gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4307 CH63_4308 CH63_4308 CH63_4308 50264 50374 + putative iSEhe3 transposase A [L] COG2963 Transposase and inactivated derivatives gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4308 CH63_4309 CH63_4309 CH63_4309 50398 50592 - integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4309 CH63_431 CH63_431 CH63_431 456934 458607 - hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_431 CH63_4310 CH63_4310 CH63_4310 51215 51433 + hypothetical protein gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4310 CH63_4311 CH63_4311 repA repA 52260 53126 - incFII family plasmid replication initiator RepA incFII_RepA: incFII family plasmid replication initiator RepA gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4311 CH63_4312 CH63_4312 sea6 sea6 53123 53395 - repA3-like domain protein gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4312 CH63_4313 CH63_4313 CH63_4313 53435 53689 - replication regulatory RepB family protein gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4313 CH63_4314 CH63_4314 CH63_4314 54492 54899 - HTH-like domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4314 CH63_4315 CH63_4315 CH63_4315 54327 54620 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4315 CH63_4316 CH63_4316 CH63_4316 54923 55240 - transposase family protein [L] COG2963 Transposase and inactivated derivatives gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4316 CH63_4317 CH63_4317 CH63_4317 55412 55648 - hypothetical protein conserved hypothetical protein~[L] COG0507 ATP-dependent exoDNAse (exonuclease V)%2C alpha subunit - helicase superfamily I member gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4317 CH63_4318 CH63_4318 CH63_4318 56062 56208 + putative iSPsy24 transposase [L] COG2963 Transposase and inactivated derivatives gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4318 CH63_4319 CH63_4319 yadA yadA 56534 57469 - adhesin yadA [UW] COG5295 Autotransporter adhesin gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4319 CH63_432 CH63_432 CH63_432 458848 459519 - putative lipoprotein gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_432 CH63_4320 CH63_4320 CH63_4320 57415 57543 - hypothetical protein gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4320 CH63_4321 CH63_4321 yadA yadA 57586 57837 - adhesin yadA gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4321 CH63_4322 CH63_4322 CH63_4322 58820 61135 - tn3 transposase DDE domain protein [L] COG4644 Transposase and inactivated derivatives%2C TnpA family gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4322 CH63_4323 CH63_4323 CH63_4323 58443 58823 + putative transposase [L] COG2801 Transposase and inactivated derivatives gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4323 CH63_4324 CH63_4324 tnpR tnpR 61299 61850 + transposon gamma-delta resolvase [L] COG1961 Site-specific recombinases%2C DNA invertase Pin homologs gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4324 CH63_4325 CH63_4325 CH63_4325 61869 62333 + hypothetical protein conserved hypothetical protein gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4325 CH63_4326 CH63_4326 CH63_4326 62472 62801 + hypothetical protein gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4326 CH63_4327 CH63_4327 CH63_4327 62901 63167 + transposase family protein [L] COG2801 Transposase and inactivated derivatives gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4327 CH63_4328 CH63_4328 CH63_4328 63248 64000 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4328 CH63_4329 CH63_4329 CH63_4329 64148 64573 - tir chaperone family protein gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4329 CH63_433 CH63_433 CH63_433 459618 462494 - hypothetical protein conserved hypothetical protein~[S] COG5373 Predicted membrane protein gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_433 CH63_4330 CH63_4330 CH63_4330 64917 65348 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4330 CH63_4331 CH63_4331 CH63_4331 65348 66496 - integrase core domain protein [L] COG4584 Transposase and inactivated derivatives gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4331 CH63_4332 CH63_4332 CH63_4332 66561 66689 + hypothetical protein conserved hypothetical protein gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4332 CH63_4333 CH63_4333 CH63_4333 66653 67267 + integrase core domain protein [L] COG2801 Transposase and inactivated derivatives gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4333 CH63_4334 CH63_4334 yerA yerA 67330 67722 - yopE regulator gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4334 CH63_4335 CH63_4335 CH63_4335 505 810 - hypothetical protein conserved hypothetical protein gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4335 CH63_4336 CH63_4336 CH63_4336 1039 2112 + putative pesticin gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4336 CH63_4337 CH63_4337 CH63_4337 2147 2551 - putative pesticin immunity protein gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4337 CH63_4338 CH63_4338 rop rop 3808 4002 - regulatory protein rop gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4338 CH63_4339 CH63_4339 CH63_4339 5039 5818 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4339 CH63_434 CH63_434 CH63_434 463022 466828 - outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_434 CH63_4340 CH63_4340 CH63_4340 5818 6840 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4340 CH63_4341 CH63_4341 CH63_4341 8107 8448 + hypothetical protein conserved hypothetical protein~[S] COG4683 Uncharacterized protein conserved in bacteria gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4341 CH63_4342 CH63_4342 CH63_4342 8448 8747 + helix-turn-helix family protein [K] COG1396 Predicted transcriptional regulators gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4342 CH63_4343 CH63_4343 CH63_4343 8934 9569 - omptin family protein [M] COG4571 Outer membrane protease gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_4343 CH63_435 CH63_435 CH63_435 467303 467968 - HTH domain protein [S] COG2964 Uncharacterized protein conserved in bacteria gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_435 CH63_436 CH63_436 CH63_436 468158 469144 + xylose isomerase-like TIM barrel family protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_436 CH63_437 CH63_437 CH63_437 469141 469518 + rutC family protein rutC family protein PH0854~[J] COG0251 Putative translation initiation inhibitor%2C yjgF family gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_437 CH63_438 CH63_438 yihN yihN 469531 470766 + inner membrane protein yihN [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_438 CH63_439 CH63_439 CH63_439 471058 471555 - cheW-like domain protein [NT] COG0835 Chemotaxis signal transduction protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_439 CH63_44 CH63_44 CH63_44 37251 37409 + hypothetical protein gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_44 CH63_440 CH63_440 CH63_440 471718 473889 - signal transducing histidine kinase%2C homodimeric domain protein [NT] COG0643 Chemotaxis protein histidine kinase and related kinases gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_440 CH63_441 CH63_441 CH63_441 473900 475201 - membrane MotB of proton-channel complex MotA/MotB family protein [N] COG1360 Flagellar motor protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_441 CH63_442 CH63_442 motA motA 475198 476085 - flagellar motor stator protein MotA motA1: flagellar motor stator protein MotA~[N] COG1291 Flagellar motor component gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_442 CH63_443 CH63_443 flhC flhC 476367 476870 - flagellar transcriptional regulator FlhC gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_443 CH63_444 CH63_444 CH63_444 476968 477225 - flagellar transcriptional activator family protein gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_444 CH63_445 CH63_445 mgtA mgtA 478413 480077 - magnesium-translocating P-type ATPase ATPase-IIIB_Mg: magnesium-translocating P-type ATPase~[P] COG0474 Cation transport ATPase gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_445 CH63_446 CH63_446 CH63_446 480044 481111 - HAD ATPase%2C P-type%2C IC family protein ATPase_P-type: HAD ATPase%2C P-type%2C IC family protein~[P] COG0474 Cation transport ATPase gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_446 CH63_447 CH63_447 CH63_447 481512 482210 - mgtC family protein [S] COG1285 Uncharacterized membrane protein gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_447 CH63_448 CH63_448 CH63_448 483369 484655 + hypothetical protein conserved hypothetical protein~[NT] COG0840 Methyl-accepting chemotaxis protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_448 CH63_449 CH63_449 CH63_449 484609 485070 + methyl-accepting chemotaxis (MCP) signaling domain protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_449 CH63_45 CH63_45 CH63_45 37681 38394 + phage antirepressor KilAC domain protein [S] COG3645 Uncharacterized phage-encoded protein gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_45 CH63_450 CH63_450 CH63_450 485253 485444 - dextransucrase DSRB family protein gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_450 CH63_451 CH63_451 cspE cspE 485659 485859 - RNA chaperone%2C negative regulator of cspA transcription [K] COG1278 Cold shock proteins gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_451 CH63_452 CH63_452 CH63_452 486412 489612 + glycosyl hydrolases 2 family protein [G] COG3250 Beta-galactosidase/beta-glucuronidase gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_452 CH63_453 CH63_453 CH63_453 490019 491029 + NAD(P)H quinone oxidoreductase%2C PIG3 family protein quinone_pig3: NAD(P)H quinone oxidoreductase%2C PIG3 family protein~[CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_453 CH63_454 CH63_454 CH63_454 491312 491845 + inner membrane YlaC family protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_454 CH63_455 CH63_455 CH63_455 492381 492830 + asnC-type helix-turn-helix domain protein [K] COG1522 Transcriptional regulators gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_455 CH63_456 CH63_456 CH63_456 492922 493821 + 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase family protein gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_456 CH63_457 CH63_457 CH63_457 494124 494327 + ydfZ family protein gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_457 CH63_458 CH63_458 appA appA 494629 495645 - periplasmic AppA protein gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_458 CH63_459 CH63_459 CH63_459 495588 495953 - histidine phosphatase super family protein gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_459 CH63_46 CH63_46 CH63_46 38872 39486 + hypothetical protein conserved hypothetical protein gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_46 CH63_460 CH63_460 CH63_460 496165 496257 + putative membrane protein gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_460 CH63_461 CH63_461 CH63_461 496485 496892 - hxlR-like helix-turn-helix family protein [K] COG1733 Predicted transcriptional regulators gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_461 CH63_462 CH63_462 CH63_462 497028 497885 + 3-beta hydroxysteroid dehydrogenase/isomerase family protein [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_462 CH63_463 CH63_463 CH63_463 498805 500385 + sensory box protein [NT] COG0840 Methyl-accepting chemotaxis protein gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_463 CH63_464 CH63_464 CH63_464 500505 500765 + hypothetical protein conserved hypothetical protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_464 CH63_465 CH63_465 CH63_465 501041 502084 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_465 CH63_466 CH63_466 icd icd 502230 503483 - isocitrate dehydrogenase%2C NADP-dependent prok_nadp_idh: isocitrate dehydrogenase%2C NADP-dependent~[C] COG0538 Isocitrate dehydrogenases gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_466 CH63_467 CH63_467 CH63_467 503614 504240 + pseudouridine synthase family protein [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_467 CH63_468 CH63_468 nudJ nudJ 504233 504679 + phosphatase nudJ [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_468 CH63_469 CH63_469 trmU trmU 504866 505981 + tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~[J] COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase%2C contains the PP-loop ATPase domain gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_469 CH63_47 CH63_47 CH63_47 39517 39966 + hypothetical protein conserved hypothetical protein~[S] COG5556 Uncharacterized conserved protein gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_47 CH63_470 CH63_470 hflD hflD 506039 506665 + high frequency lysogenization protein hflD [R] COG2915 Uncharacterized protein involved in purine metabolism gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_470 CH63_471 CH63_471 purB purB 506726 508096 + adenylosuccinate lyase purB: adenylosuccinate lyase~[F] COG0015 Adenylosuccinate lyase gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_471 CH63_472 CH63_472 CH63_472 508284 508907 + outer membrane beta-barrel domain protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_472 CH63_473 CH63_473 phoP phoP 509118 509789 + transcriptional regulatory protein phoP [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_473 CH63_474 CH63_474 CH63_474 509843 511249 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_474 CH63_475 CH63_475 CH63_475 511333 512454 + cupin superfamily protein [S] COG2850 Uncharacterized conserved protein gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_475 CH63_476 CH63_476 pepT pepT 512687 513922 - peptidase T peptidase-T: peptidase T~[E] COG2195 Di- and tripeptidases gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_476 CH63_477 CH63_477 CH63_477 514252 515088 - sir2 family protein [K] COG0846 NAD-dependent protein deacetylases%2C SIR2 family gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_477 CH63_478 CH63_478 CH63_478 515282 516052 - glucokinase family protein [KG] COG1940 Transcriptional regulator/sugar kinase gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_478 CH63_479 CH63_479 lolE lolE 516071 517318 - liporeleasing system%2C transmembrane protein LolE lolE_release: liporeleasing system%2C transmembrane protein LolE~[M] COG4591 ABC-type transport system%2C involved in lipoprotein release%2C permease component gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_479 CH63_48 CH63_48 CH63_48 39976 40365 + putative terminase large subunit gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_48 CH63_480 CH63_480 lolD lolD 517318 518022 - liporeleasing system%2C ATP-binding protein lolD_lipo_ex: liporeleasing system%2C ATP-binding protein~[V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_480 CH63_481 CH63_481 lolC lolC 518015 519217 - lipo-releasing system transmembrane protein lolC [M] COG4591 ABC-type transport system%2C involved in lipoprotein release%2C permease component gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_481 CH63_482 CH63_482 mfd mfd 519487 522933 + transcription-repair coupling factor mfd: transcription-repair coupling factor~[LK] COG1197 Transcription-repair coupling factor (superfamily II helicase) gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_482 CH63_483 CH63_483 CH63_483 523172 523711 - glycine zipper 2TM domain protein [S] COG3134 Predicted outer membrane lipoprotein gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_483 CH63_484 CH63_484 CH63_484 524041 525249 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_484 CH63_485 CH63_485 CH63_485 525345 525758 - hypothetical protein conserved hypothetical protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_485 CH63_486 CH63_486 CH63_486 525766 526164 - hypothetical protein conserved hypothetical protein gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_486 CH63_487 CH63_487 CH63_487 526873 528177 - pyridine nucleotide-disulfide oxidoreductase family protein [C] COG1252 NADH dehydrogenase%2C FAD-containing subunit gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_487 CH63_488 CH63_488 CH63_488 528552 529095 - hypothetical protein pseudogene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_488 CH63_49 CH63_49 CH63_49 40601 41809 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_49 CH63_490 CH63_490 nagZ nagZ 529223 530254 - beta-hexosaminidase [G] COG1472 Beta-glucosidase-related glycosidases gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_490 CH63_491 CH63_491 thiK thiK 530325 531131 - thiamine kinase ycfN_thiK: thiamine kinase~[M] COG0510 Predicted choline kinase involved in LPS biosynthesis gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_491 CH63_492 CH63_492 CH63_492 531172 531747 - hypothetical protein conserved hypothetical protein~[R] COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_492 CH63_493 CH63_493 CH63_493 531788 532177 - hypothetical protein conserved hypothetical protein~[R] COG5633 Predicted periplasmic lipoprotein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_493 CH63_494 CH63_494 CH63_494 532212 532565 - HIT domain protein [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_494 CH63_495 CH63_495 CH63_495 532739 533557 - shikimate dehydrogenase substrate binding domain protein [E] COG0169 Shikimate 5-dehydrogenase gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_495 CH63_496 CH63_496 CH63_496 534000 534458 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_496 CH63_497 CH63_497 ptsG ptsG 534648 536081 - PTS system glucose-specific EIICB component [G] COG1263 Phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_497 CH63_498 CH63_498 CH63_498 536387 537196 - hydrolase%2C TatD family protein [L] COG0084 Mg-dependent DNase gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_498 CH63_499 CH63_499 holB holB 537211 538233 - DNA polymerase III%2C delta' subunit holB: DNA polymerase III%2C delta' subunit~[L] COG0470 ATPase involved in DNA replication gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_499 CH63_5 CH63_5 CH63_5 3167 3925 - ABC transporter family protein [P] COG1121 ABC-type Mn/Zn transport systems%2C ATPase component gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_5 CH63_50 CH63_50 CH63_50 41814 42788 + putative phage terminase large subunit gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_50 CH63_500 CH63_500 tmk tmk 538233 538871 - dTMP kinase DTMP_kinase: dTMP kinase~[F] COG0125 Thymidylate kinase gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_500 CH63_501 CH63_501 CH63_501 538861 539886 - yceG-like family protein [R] COG1559 Predicted periplasmic solute-binding protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_501 CH63_502 CH63_502 pabC pabC 540175 540981 - aminodeoxychorismate lyase pabC_Proteo: aminodeoxychorismate lyase~[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_502 CH63_503 CH63_503 CH63_503 541397 541855 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_503 CH63_504 CH63_504 fabF fabF 542055 543296 - beta-ketoacyl-acyl-carrier-protein synthase II fabF: beta-ketoacyl-acyl-carrier-protein synthase II~[IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_504 CH63_505 CH63_505 acpP acpP 543391 543627 - acyl carrier protein acyl_carrier: acyl carrier protein~[IQ] COG0236 Acyl carrier protein gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_505 CH63_506 CH63_506 fabG fabG 543781 544515 - 3-oxoacyl-[acyl-carrier-protein] reductase 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase~[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_506 CH63_507 CH63_507 fabD fabD 544529 545458 - malonyl CoA-acyl carrier protein transacylase fabD: malonyl CoA-acyl carrier protein transacylase~[I] COG0331 (acyl-carrier-protein) S-malonyltransferase gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_507 CH63_508 CH63_508 fabH fabH 545496 546446 - 3-oxoacyl-[acyl-carrier-] synthase III family protein fabH: 3-oxoacyl-[acyl-carrier-] synthase III family protein~[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_508 CH63_509 CH63_509 plsX plsX 546453 547457 - fatty acid/phospholipid synthesis protein PlsX plsX: fatty acid/phospholipid synthesis protein PlsX~[I] COG0416 Fatty acid/phospholipid biosynthesis enzyme gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_509 CH63_51 CH63_51 CH63_51 42788 43516 + putative phage domain protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_51 CH63_510 CH63_510 rpmF rpmF 547521 547688 - ribosomal protein L32 rpmF_bact: ribosomal protein L32~[J] COG0333 Ribosomal protein L32 gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_510 CH63_511 CH63_511 CH63_511 547701 548225 - hypothetical protein conserved hypothetical protein~[R] COG1399 Predicted metal-binding%2C possibly nucleic acid-binding protein gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_511 CH63_512 CH63_512 maf maf 548367 548963 + septum formation protein Maf maf: septum formation protein Maf~[D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_512 CH63_513 CH63_513 CH63_513 549086 550048 - pseudouridine synthase%2C RluA family protein rluA_subfam: pseudouridine synthase%2C RluA family protein~[J] COG0564 Pseudouridylate synthases%2C 23S RNA-specific gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_513 CH63_514 CH63_514 CH63_514 550623 554273 + ribonuclease%2C Rne/Rng family domain protein RNaseEG: ribonuclease%2C Rne/Rng family domain protein~[J] COG1530 Ribonucleases G and E gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_514 CH63_515 CH63_515 CH63_515 554369 555577 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_515 CH63_516 CH63_516 CH63_516 555854 556141 - antibiotic biosynthesis monooxygenase family protein [S] COG1359 Uncharacterized conserved protein gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_516 CH63_517 CH63_517 pyrC pyrC 556376 557422 + dihydroorotase%2C homodimeric type pyrC_dimer: dihydroorotase%2C homodimeric type~[F] COG0418 Dihydroorotase gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_517 CH63_518 CH63_518 CH63_518 557735 557980 + dinI-like family protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_518 CH63_519 CH63_519 CH63_519 558745 559953 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_519 CH63_52 CH63_52 CH63_52 43535 44176 + hypothetical protein conserved hypothetical protein gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_52 CH63_520 CH63_520 CH63_520 558486 558782 + bssS family protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_520 CH63_521 CH63_521 solA solA 560314 561429 + N-methyl-L-tryptophan oxidase [E] COG0665 Glycine/D-amino acid oxidases (deaminating) gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_521 CH63_522 CH63_522 CH63_522 561696 562310 + bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_522 CH63_523 CH63_523 CH63_523 562882 563940 - hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_523 CH63_524 CH63_524 CH63_524 564089 565156 - rhodanese-like domain protein [R] COG1054 Predicted sulfurtransferase gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_524 CH63_525 CH63_525 CH63_525 565515 565679 - putative membrane protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_525 CH63_526 CH63_526 CH63_526 566207 566884 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_526 CH63_527 CH63_527 CH63_527 567952 568689 - bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_527 CH63_528 CH63_528 esaI esaI 567315 567959 + acyl-homoserine-lactone synthase [TQ] COG3916 N-acyl-L-homoserine lactone synthetase gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_528 CH63_529 CH63_529 CH63_529 569175 570101 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_529 CH63_53 CH63_53 CH63_53 44177 45289 + hypothetical protein conserved hypothetical protein gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_53 CH63_530 CH63_530 CH63_530 570216 570425 - hypothetical protein conserved hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_530 CH63_531 CH63_531 CH63_531 570549 571907 + sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_531 CH63_532 CH63_532 fae fae 571954 572457 + formaldehyde-activating enzyme one_C_fae: formaldehyde-activating enzyme~[S] COG1795 Uncharacterized conserved protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_532 CH63_533 CH63_533 CH63_533 572468 572590 + putative oxidoreductase [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_533 CH63_534 CH63_534 CH63_534 572548 573486 + aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_534 CH63_535 CH63_535 cas6f cas6f 573564 574118 - CRISPR-associated endoribonuclease Cas6/Csy4%2C subtype I-F/YPEST cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4%2C subtype I-F/YPEST gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_535 CH63_536 CH63_536 csy3 csy3 574129 575133 - CRISPR type I-F/YPEST-associated protein Csy3 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_536 CH63_537 CH63_537 csy2 csy2 575151 576101 - CRISPR type I-F/YPEST-associated protein Csy2 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_537 CH63_538 CH63_538 csy1 csy1 576098 577444 - CRISPR type I-F/YPEST-associated protein Csy1 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_538 CH63_539 CH63_539 cas3f cas3f 577853 581140 - CRISPR-associated helicase Cas3%2C subtype I-F/YPEST cas3_yersinia: CRISPR-associated helicase Cas3%2C subtype I-F/YPEST~[R] COG1203 Predicted helicases gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_539 CH63_54 CH63_54 CH63_54 45411 46184 + putative phage protein gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_54 CH63_540 CH63_540 cas1 cas1 581137 582117 - CRISPR-associated endonuclease Cas1 cas1: CRISPR-associated endonuclease Cas1~[L] COG1518 Uncharacterized protein predicted to be involved in DNA repair gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_540 CH63_541 CH63_541 CH63_541 583022 584266 + mechanosensitive ion channel family protein [M] COG0668 Small-conductance mechanosensitive channel gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_541 CH63_542 CH63_542 CH63_542 584849 586123 - putative exported protein gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_542 CH63_543 CH63_543 CH63_543 586162 587277 - putative exported protein gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_543 CH63_544 CH63_544 CH63_544 587400 588338 - hypothetical protein conserved hypothetical protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_544 CH63_545 CH63_545 CH63_545 588365 589420 - hypothetical protein conserved hypothetical protein~[G] COG2152 Predicted glycosylase gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_545 CH63_546 CH63_546 CH63_546 589567 590391 - binding--dependent transport system inner membrane component family protein [G] COG0395 ABC-type sugar transport system%2C permease component gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_546 CH63_547 CH63_547 CH63_547 590392 591267 - binding--dependent transport system inner membrane component family protein [G] COG1175 ABC-type sugar transport systems%2C permease components gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_547 CH63_548 CH63_548 CH63_548 591376 592662 - bacterial extracellular solute-binding family protein [G] COG1653 ABC-type sugar transport system%2C periplasmic component gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_548 CH63_549 CH63_549 CH63_549 592934 593974 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_549 CH63_55 CH63_55 CH63_55 46198 47403 + bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_55 CH63_550 CH63_550 CH63_550 593991 595379 + phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III family protein [G] COG1109 Phosphomannomutase gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_550 CH63_551 CH63_551 CH63_551 595479 596558 + ABC transporter family protein [G] COG3839 ABC-type sugar transport systems%2C ATPase components gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_551 CH63_552 CH63_552 CH63_552 596823 597353 - putative exported protein gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_552 CH63_553 CH63_553 CH63_553 597626 598018 - hypothetical protein conserved hypothetical protein gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_553 CH63_554 CH63_554 CH63_554 598178 598582 - hypothetical protein conserved hypothetical protein gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_554 CH63_555 CH63_555 CH63_555 599094 599291 - hypothetical protein conserved hypothetical protein gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_555 CH63_556 CH63_556 CH63_556 599301 601334 - pre-toxin domain with VENN motif family protein [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_556 CH63_557 CH63_557 CH63_557 601998 602249 - hypothetical protein conserved hypothetical protein gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_557 CH63_558 CH63_558 CH63_558 602494 603003 - hypothetical protein conserved hypothetical protein~[S] COG4304 Uncharacterized protein conserved in bacteria gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_558 CH63_559 CH63_559 CH63_559 603005 608617 - hemagluttinin repeat family protein [U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_559 CH63_56 CH63_56 CH63_56 47451 47933 + hypothetical protein conserved hypothetical protein gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_56 CH63_560 CH63_560 CH63_560 608634 610601 - hypothetical protein adhes_NPXG: filamentous hemagglutinin family N-terminal domain protein~[U] COG3210 Large exoproteins involved in heme utilization or adhesion gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_560 CH63_561 CH63_561 CH63_561 610757 612445 - surface antigen family protein [U] COG2831 Hemolysin activation/secretion protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_561 CH63_562 CH63_562 CH63_562 613098 614063 - 2Fe-2S iron-sulfur cluster binding domain protein [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_562 CH63_563 CH63_563 CH63_563 614159 615212 - ring hydroxylating alpha subunit family protein pseudogene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_563 CH63_565 CH63_565 CH63_565 615329 616975 - transporter%2C betaine/carnitine/choline transporter family protein bcct: transporter%2C betaine/carnitine/choline transporter family protein~[M] COG1292 Choline-glycine betaine transporter gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_565 CH63_566 CH63_566 CH63_566 617592 618677 - tartrate dehydrogenase TTC: tartrate dehydrogenase~[CE] COG0473 Isocitrate/isopropylmalate dehydrogenase gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_566 CH63_567 CH63_567 CH63_567 618780 619721 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_567 CH63_568 CH63_568 CH63_568 619968 620972 + bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_568 CH63_569 CH63_569 CH63_569 621105 622097 - branched-chain amino acid transport system / permease component family protein [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_569 CH63_57 CH63_57 CH63_57 47930 48184 + hypothetical protein conserved hypothetical protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_57 CH63_570 CH63_570 CH63_570 622094 623584 - ABC transporter family protein [G] COG1129 ABC-type sugar transport system%2C ATPase component gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_570 CH63_571 CH63_571 CH63_571 623624 624541 - periplasmic binding domain protein [G] COG1879 ABC-type sugar transport system%2C periplasmic component gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_571 CH63_572 CH63_572 CH63_572 624716 625783 - zinc-binding dehydrogenase family protein [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_572 CH63_573 CH63_573 CH63_573 626525 627193 - hypothetical protein conserved hypothetical protein gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_573 CH63_574 CH63_574 CH63_574 627389 627931 - hypothetical protein conserved hypothetical protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_574 CH63_575 CH63_575 CH63_575 628169 629107 - cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG3965 Predicted Co/Zn/Cd cation transporters gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_575 CH63_576 CH63_576 ompX ompX 629423 629947 - outer membrane protein X [M] COG3637 Opacity protein and related surface antigens gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_576 CH63_577 CH63_577 CH63_577 630352 631239 + eamA-like transporter family protein [R] COG5006 Predicted permease%2C DMT superfamily gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_577 CH63_578 CH63_578 CH63_578 631255 631752 + acetyltransferase domain protein [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_578 CH63_579 CH63_579 CH63_579 631775 632425 + methyltransferase domain protein [R] COG4106 Trans-aconitate methyltransferase gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_579 CH63_58 CH63_58 CH63_58 48186 48536 + putative phage structural protein gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_58 CH63_580 CH63_580 dps dps 632809 633312 + DNA protection during starvation protein [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_580 CH63_581 CH63_581 CH63_581 633632 634759 + tetratricopeptide repeat family protein [S] COG1434 Uncharacterized conserved protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_581 CH63_582 CH63_582 CH63_582 635329 636072 + bacterial extracellular solute-binding s%2C 3 family protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_582 CH63_583 CH63_583 CH63_583 636107 636763 + amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG0765 ABC-type amino acid transport system%2C permease component gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_583 CH63_584 CH63_584 CH63_584 636760 637482 + ABC transporter family protein [E] COG1126 ABC-type polar amino acid transport system%2C ATPase component gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_584 CH63_585 CH63_585 bdlA bdlA 637722 638942 - biofilm dispersion protein BdlA [T] COG2202 FOG: PAS/PAC domain gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_585 CH63_586 CH63_586 CH63_586 639078 640022 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_586 CH63_587 CH63_587 CH63_587 639962 640090 + putative transposase [L] COG4584 Transposase and inactivated derivatives gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_587 CH63_588 CH63_588 CH63_588 640090 640869 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_588 CH63_589 CH63_589 CH63_589 641731 642696 - hypothetical protein conserved hypothetical protein~[R] COG3129 Predicted SAM-dependent methyltransferase gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_589 CH63_59 CH63_59 CH63_59 48538 49122 + hypothetical protein conserved hypothetical protein gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_59 CH63_590 CH63_590 CH63_590 643029 643289 + hypothetical protein conserved hypothetical protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_590 CH63_591 CH63_591 CH63_591 643671 644630 - glycosyl transferase family%2C a/b domain protein [E] COG0547 Anthranilate phosphoribosyltransferase gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_591 CH63_592 CH63_592 menE menE 644696 646111 - O-succinylbenzoate-CoA ligase menE: O-succinylbenzoate-CoA ligase~[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_592 CH63_593 CH63_593 menC menC 646099 647070 - o-succinylbenzoate synthase menC_gamma/gm+: o-succinylbenzoate synthase~[H] COG1441 O-succinylbenzoate synthase gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_593 CH63_594 CH63_594 menB menB 647070 647927 - naphthoate synthase menB: naphthoate synthase~[H] COG0447 Dihydroxynaphthoic acid synthase gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_594 CH63_595 CH63_595 menH menH 647941 648759 - 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase menH_SHCHC: 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase~[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_595 CH63_596 CH63_596 menD menD 648756 650321 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase~[H] COG1165 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_596 CH63_597 CH63_597 menD menD 650348 650458 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase [H] COG1165 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_597 CH63_598 CH63_598 menF menF 650686 652053 - isochorismate hydroxymutase 2 [HQ] COG1169 Isochorismate synthase gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_598 CH63_599 CH63_599 CH63_599 652581 653225 - putative protein RhiA gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_599 CH63_6 CH63_6 CH63_6 4001 4957 + periplasmic solute binding family protein [P] COG4531 ABC-type Zn2+ transport system%2C periplasmic component/surface adhesin gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_6 CH63_60 CH63_60 CH63_60 49119 49526 + hypothetical protein bacteriophage related domain of unknown function family protein gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_60 CH63_600 CH63_600 CH63_600 653780 654088 - hypothetical protein conserved hypothetical protein~[S] COG4575 Uncharacterized conserved protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_600 CH63_601 CH63_601 CH63_601 654652 654795 + putative membrane protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_601 CH63_602 CH63_602 edd edd 655014 656885 - phosphogluconate dehydratase edd: phosphogluconate dehydratase~[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_602 CH63_603 CH63_603 CH63_603 656895 657410 - hypothetical protein conserved hypothetical protein~[S] COG4702 Uncharacterized conserved protein gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_603 CH63_604 CH63_604 CH63_604 657440 658756 - sugar (and other) transporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_604 CH63_605 CH63_605 CH63_605 659302 660252 - D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain protein [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_605 CH63_606 CH63_606 CH63_606 660718 661710 - bacterial regulatory s%2C lacI family protein [K] COG1609 Transcriptional regulators gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_606 CH63_607 CH63_607 CH63_607 662179 663462 + glycosyl hydrolase like GH101 family protein [S] COG1649 Uncharacterized protein conserved in bacteria gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_607 CH63_608 CH63_608 CH63_608 664221 664985 + short chain dehydrogenase family protein [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_608 CH63_609 CH63_609 CH63_609 665034 665570 + carbohydrate kinase%2C thermoresistant glucokinase family protein therm_gnt_kin: carbohydrate kinase%2C thermoresistant glucokinase family protein~[G] COG3265 Gluconate kinase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_609 CH63_61 CH63_61 CH63_61 49592 50512 + bacterial Ig-like domain family protein [N] COG5492 Bacterial surface proteins containing Ig-like domains gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_61 CH63_610 CH63_610 CH63_610 665648 666115 + yhcH/YjgK/YiaL family protein [G] COG2731 Beta-galactosidase%2C beta subunit gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_610 CH63_611 CH63_611 CH63_611 666476 667666 - hypothetical protein conserved hypothetical protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_611 CH63_612 CH63_612 CH63_612 667902 669365 - proton-translocating NADH-quinone oxidoreductase%2C chain N family protein NDH_I_N: proton-translocating NADH-quinone oxidoreductase%2C chain N family protein~[C] COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_612 CH63_613 CH63_613 nuoM nuoM 669372 670904 - NADH-quinone oxidoreductase subunit M [C] COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_613 CH63_614 CH63_614 CH63_614 670944 672788 - proton-translocating NADH-quinone oxidoreductase%2C chain L family protein NDH_I_L: proton-translocating NADH-quinone oxidoreductase%2C chain L family protein~[CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter%2C MnhA subunit gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_614 CH63_615 CH63_615 nuoK nuoK 672785 673087 - NADH-quinone oxidoreductase subunit K [C] COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_615 CH63_616 CH63_616 nuoJ nuoJ 673084 673629 - NADH-quinone oxidoreductase subunit J [C] COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_616 CH63_617 CH63_617 CH63_617 673642 674184 - NADH-quinone oxidoreductase%2C chain I family protein nuoI: NADH-quinone oxidoreductase%2C chain I family protein~[C] COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_617 CH63_618 CH63_618 nuoH nuoH 674199 675176 - NADH-quinone oxidoreductase subunit H [C] COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_618 CH63_619 CH63_619 nuoG nuoG 675173 677917 - NADH dehydrogenase (quinone)%2C G subunit nuoG: NADH dehydrogenase (quinone)%2C G subunit~[C] COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_619 CH63_62 CH63_62 CH63_62 50525 50836 + hypothetical protein conserved hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_62 CH63_620 CH63_620 nuoF nuoF 678004 679389 - NADH oxidoreductase (quinone)%2C F subunit nuoF_fam: NADH oxidoreductase (quinone)%2C F subunit~[C] COG1894 NADH:ubiquinone oxidoreductase%2C NADH-binding (51 kD) subunit gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_620 CH63_621 CH63_621 nuoE nuoE 679386 679949 - NADH-quinone oxidoreductase subunit E [C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_621 CH63_622 CH63_622 nuoD nuoD 679952 681748 - NADH dehydrogenase (quinone)%2C D subunit nuoD: NADH dehydrogenase (quinone)%2C D subunit~[C] COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_622 CH63_623 CH63_623 nuoB nuoB 681889 682566 - NADH-quinone oxidoreductase subunit B [C] COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_623 CH63_624 CH63_624 CH63_624 682668 683168 - NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 family protein [C] COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_624 CH63_625 CH63_625 lrhA lrhA 683846 684778 - transcriptional regulator LrhA [K] COG0583 Transcriptional regulator gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_625 CH63_626 CH63_626 CH63_626 685634 686848 + aminotransferase class I and II family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_626 CH63_627 CH63_627 CH63_627 686999 687592 + HD domain protein [R] COG1896 Predicted hydrolases of HD superfamily gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_627 CH63_628 CH63_628 CH63_628 687935 689767 - trkA-C domain protein [P] COG0471 Di- and tricarboxylate transporters gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_628 CH63_629 CH63_629 CH63_629 690059 690715 - HAD hydrolase%2C IA%2C variant 3 family protein HAD-SF-IA-v3: HAD hydrolase%2C IA%2C variant 3 family protein~[R] COG0637 Predicted phosphatase/phosphohexomutase gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_629 CH63_63 CH63_63 CH63_63 50977 51144 + hypothetical protein conserved hypothetical protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_63 CH63_630 CH63_630 CH63_630 690880 691374 - hypothetical protein conserved hypothetical protein~[S] COG3013 Uncharacterized conserved protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_630 CH63_631 CH63_631 CH63_631 691682 692137 - hypothetical protein conserved hypothetical protein~[S] COG3092 Uncharacterized protein conserved in bacteria gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_631 CH63_632 CH63_632 ackA ackA 692559 693761 + acetate kinase ackA: acetate kinase~[C] COG0282 Acetate kinase gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_632 CH63_633 CH63_633 pta pta 693929 696082 + phosphate acetyltransferase pta: phosphate acetyltransferase~[C] COG0280 Phosphotransacetylase gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_633 CH63_634 CH63_634 CH63_634 696348 697382 - putative transcriptional regulator [K] COG1609 Transcriptional regulators gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_634 CH63_635 CH63_635 ptsN1 ptsN1 697749 698192 + phosphotransferase enzyme II%2C A component [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_635 CH63_636 CH63_636 CH63_636 698361 698615 + PTS system%2C Lactose/Cellobiose specific IIB subunit [G] COG3414 Phosphotransferase system%2C galactitol-specific IIB component gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_636 CH63_637 CH63_637 CH63_637 698637 699845 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_637 CH63_638 CH63_638 CH63_638 699985 701241 + PTS system sugar-specific permease component family protein [S] COG3037 Uncharacterized protein conserved in bacteria gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_638 CH63_639 CH63_639 CH63_639 701358 701906 - NUDIX domain protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_639 CH63_64 CH63_64 CH63_64 51145 54648 + phage tail tape measure protein%2C lambda family tape_meas_lam_C: phage tail tape measure protein%2C lambda family~[S] COG5281 Phage-related minor tail protein gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_64 CH63_640 CH63_640 CH63_640 702128 702715 - phosphodiesterase%2C family protein yfcE: phosphodiesterase%2C MJ0936 family protein~[R] COG0622 Predicted phosphoesterase gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_640 CH63_641 CH63_641 CH63_641 702903 703595 - EAL domain protein [T] COG2200 FOG: EAL domain gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_641 CH63_642 CH63_642 CH63_642 703949 704857 + rmlD substrate binding domain protein [R] COG1090 Predicted nucleoside-diphosphate sugar epimerase gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_642 CH63_643 CH63_643 CH63_643 704980 705777 - ABC transporter family protein [E] COG4598 ABC-type histidine transport system%2C ATPase component gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_643 CH63_644 CH63_644 hisM hisM 705791 706507 - histidine transport system permease protein hisM [E] COG4160 ABC-type arginine/histidine transport system%2C permease component gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_644 CH63_645 CH63_645 CH63_645 706504 707190 - amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein HEQRo_perm_3TM: amino ABC transporter%2C permease%2C 3-TM region%2C His/Glu/Gln/Arg/opine family domain protein~[E] COG4215 ABC-type arginine transport system%2C permease component gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_645 CH63_646 CH63_646 hisJ hisJ 707293 708075 - histidine-binding periplasmic protein [ET] COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_646 CH63_647 CH63_647 CH63_647 708600 709172 - polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein~[H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_647 CH63_648 CH63_648 purF purF 709419 710936 - amidophosphoribosyltransferase purF: amidophosphoribosyltransferase~[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_648 CH63_649 CH63_649 CH63_649 710949 711458 - colicin V production family protein [R] COG1286 Uncharacterized membrane protein%2C required for colicin V production gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_649 CH63_65 CH63_65 CH63_65 54651 54992 + phage minor tail family protein [S] COG4718 Phage-related protein gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_65 CH63_650 CH63_650 CH63_650 711770 712492 - sporulation related domain protein [S] COG3147 Uncharacterized protein conserved in bacteria gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_650 CH63_651 CH63_651 folC folC 712612 713916 - bifunctional FolC family protein folC: bifunctional FolC family protein~[H] COG0285 Folylpolyglutamate synthase gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_651 CH63_652 CH63_652 accD accD 714165 715079 - acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit accD: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~[I] COG0777 Acetyl-CoA carboxylase beta subunit gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_652 CH63_653 CH63_653 CH63_653 715310 715972 - hypothetical protein conserved hypothetical protein~[S] COG0586 Uncharacterized membrane-associated protein gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_653 CH63_654 CH63_654 truA truA 716129 716923 - tRNA pseudouridine(38-40) synthase hisT_truA: tRNA pseudouridine(38-40) synthase~[J] COG0101 Pseudouridylate synthase gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_654 CH63_655 CH63_655 CH63_655 717010 718020 - semialdehyde dehydrogenase%2C dimerization domain protein [E] COG0136 Aspartate-semialdehyde dehydrogenase gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_655 CH63_656 CH63_656 pdxB pdxB 718190 719317 - erythronate-4-phosphate dehydrogenase [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_656 CH63_657 CH63_657 CH63_657 719364 720149 - helix-turn-helix domain protein [K] COG2207 AraC-type DNA-binding domain-containing proteins gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_657 CH63_658 CH63_658 CH63_658 720375 721292 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_658 CH63_659 CH63_659 CH63_659 721577 722614 + putative flagellar assembly regulatory protein%2CFlk gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_659 CH63_66 CH63_66 CH63_66 55166 55918 + phage minor tail protein L phage_tail_L: phage minor tail protein L~[S] COG4672 Phage-related protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_66 CH63_660 CH63_660 smfA smfA 722956 723486 - fimbria A protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_660 CH63_661 CH63_661 CH63_661 724277 724969 + aspartate racemase family protein asp_race: aspartate racemase family protein~[M] COG1794 Aspartate racemase gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_661 CH63_662 CH63_662 fabB fabB 725377 726600 - 3-oxoacyl-[acyl-carrier-protein] synthase 1 [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_662 CH63_663 CH63_663 mnmC mnmC 726772 728841 + tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC mnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC%2C C-terminal domain~[S] COG4121 Uncharacterized conserved protein gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_663 CH63_664 CH63_664 CH63_664 729019 729297 - yfcL family protein gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_664 CH63_665 CH63_665 CH63_665 729355 729897 - hypothetical protein conserved hypothetical protein~[S] COG3101 Uncharacterized protein conserved in bacteria gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_665 CH63_666 CH63_666 CH63_666 729997 730803 - hypothetical protein conserved hypothetical protein~[R] COG0730 Predicted permeases gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_666 CH63_667 CH63_667 CH63_667 730807 731604 - penicillin-insensitive murein endopeptidase family protein [M] COG3770 Murein endopeptidase gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_667 CH63_668 CH63_668 aroC aroC 731640 732725 - chorismate synthase aroC: chorismate synthase~[E] COG0082 Chorismate synthase gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_668 CH63_669 CH63_669 prmB prmB 732802 733734 - (glutamine-N5) methyltransferase%2C ribosomal protein L3-specific L3_gln_methyl: -(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific~[J] COG2890 Methylase of polypeptide chain release factors gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_669 CH63_67 CH63_67 CH63_67 55921 56631 + hypothetical protein conserved hypothetical protein~[R] COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_67 CH63_670 CH63_670 CH63_670 734104 734634 + smr domain protein [S] COG2840 Uncharacterized protein conserved in bacteria gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_670 CH63_671 CH63_671 sixA sixA 734988 735479 - phosphohistidine phosphatase SixA sixA: phosphohistidine phosphatase SixA~[T] COG2062 Phosphohistidine phosphatase SixA gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_671 CH63_672 CH63_672 fadJ fadJ 736048 738372 - fatty oxidation complex%2C alpha subunit FadJ fadJ: fatty oxidation complex%2C alpha subunit FadJ~[I] COG1024 Enoyl-CoA hydratase/carnithine racemase gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_672 CH63_673 CH63_673 fadI fadI 738372 739682 - acetyl-CoA C-acyltransferase FadI fadI: acetyl-CoA C-acyltransferase FadI~[I] COG0183 Acetyl-CoA acetyltransferase gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_673 CH63_674 CH63_674 CH63_674 739969 740265 - hypothetical protein conserved hypothetical family protein~[S] COG3691 Uncharacterized protein conserved in bacteria gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_674 CH63_675 CH63_675 CH63_675 740679 741944 + outer membrane transport family protein [I] COG2067 Long-chain fatty acid transport protein gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_675 CH63_676 CH63_676 CH63_676 742051 742815 - putative phospholipid-binding lipoprotein mlaA [M] COG2853 Surface lipoprotein gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_676 CH63_677 CH63_677 ccmI ccmI 742851 744077 - cytochrome c-type biogenesis protein CcmI cytochro_ccmI: cytochrome c-type biogenesis protein CcmI~[O] COG4235 Cytochrome c biogenesis factor gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_677 CH63_678 CH63_678 CH63_678 744077 744406 - cytochrome C biogenesis family protein [O] COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_678 CH63_679 CH63_679 dsbE dsbE 744432 745151 - periplasmic thiol:disulfide oxidoreductase%2C DsbE subfamily protein dsbE: periplasmic thiol:disulfide oxidoreductases%2C DsbE subfamily protein~[OC] COG0526 Thiol-disulfide isomerase and thioredoxins gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_679 CH63_68 CH63_68 CH63_68 56892 57524 + hypothetical protein conserved hypothetical protein gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_68 CH63_680 CH63_680 ccmF ccmF 745148 747118 - cytochrome c-type biogenesis protein CcmF nrfE: cytochrome c-type biogenesis protein CcmF~[O] COG1138 Cytochrome c biogenesis factor gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_680 CH63_681 CH63_681 ccmE ccmE 747115 747609 - cytochrome c-type biogenesis protein CcmE [O] COG2332 Cytochrome c-type biogenesis protein CcmE gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_681 CH63_682 CH63_682 ccmD ccmD 747606 747908 - heme exporter protein CcmD cytochro_ccmD: heme exporter protein CcmD~[U] COG3114 Heme exporter protein D gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_682 CH63_683 CH63_683 ccmC ccmC 747905 748642 - heme exporter CcmC family protein ccmC: heme exporter CcmC family protein~[O] COG0755 ABC-type transport system involved in cytochrome c biogenesis%2C permease component gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_683 CH63_684 CH63_684 ccmB ccmB 748705 749364 - heme exporter protein CcmB ccmB: heme exporter protein CcmB~[O] COG2386 ABC-type transport system involved in cytochrome c biogenesis%2C permease component gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_684 CH63_685 CH63_685 ccmA ccmA 749334 749990 - heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[O] COG4133 ABC-type transport system involved in cytochrome c biogenesis%2C ATPase component gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_685 CH63_686 CH63_686 CH63_686 750435 750902 - hypothetical protein conserved hypothetical protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_686 CH63_687 CH63_687 CH63_687 751157 751231 - tRNA-Arg tRNA gene681 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_687 CH63_688 CH63_688 CH63_688 751518 752060 + lemA family protein [S] COG1704 Uncharacterized conserved protein gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_688 CH63_689 CH63_689 CH63_689 752065 754104 + hypothetical protein conserved hypothetical protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_689 CH63_69 CH63_69 CH63_69 57603 58034 - arc-like DNA binding domain protein gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_69 CH63_690 CH63_690 CH63_690 754480 754821 + phnA Zinc-Ribbon family protein [P] COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_690 CH63_691 CH63_691 CH63_691 754896 755243 - putative membrane protein gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_691 CH63_692 CH63_692 CH63_692 755268 755747 - 25-like lysozyme family protein [S] COG3518 Uncharacterized protein conserved in bacteria gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_692 CH63_693 CH63_693 CH63_693 755892 756698 - impE family protein [R] COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_693 CH63_694 CH63_694 CH63_694 756718 757560 - hypothetical protein conserved hypothetical protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_694 CH63_695 CH63_695 CH63_695 757566 757826 - PAAR motif family protein [M] COG3209 Rhs family protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_695 CH63_696 CH63_696 CH63_696 757925 760477 - Rhs element Vgr family protein vgr_GE: Rhs element Vgr family protein~[S] COG3501 Uncharacterized protein conserved in bacteria gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_696 CH63_697 CH63_697 CH63_697 760804 764630 - intracellular multiplication and macrophage-killing family protein pseudogene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_697 CH63_699 CH63_699 CH63_699 764639 765475 - type VI secretion system peptidoglycan-associated domain protein type_VI_ompA: type VI secretion system peptidoglycan-associated domain~[N] COG1360 Flagellar motor protein gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_699 CH63_7 CH63_7 CH63_7 4978 6294 + lysM domain protein [M] COG0739 Membrane proteins related to metalloendopeptidases gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_7 CH63_70 CH63_70 CH63_70 58158 58325 + hypothetical protein gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_70 CH63_700 CH63_700 CH63_700 765491 766270 - istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_700 CH63_701 CH63_701 CH63_701 766270 767292 - helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_701 CH63_702 CH63_702 CH63_702 767306 767938 - type IV/VI secretion system%2C DotU family domain protein IV_VI_DotU: type IV/VI secretion system%2C DotU family domain protein~[S] COG3455 Uncharacterized protein conserved in bacteria gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_702 CH63_703 CH63_703 CH63_703 767971 769320 - hypothetical protein conserved hypothetical protein~[S] COG3522 Uncharacterized protein conserved in bacteria gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_703 CH63_704 CH63_704 CH63_704 769324 769863 - type VI secretion lipofamily protein [S] COG3521 Uncharacterized protein conserved in bacteria gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_704 CH63_705 CH63_705 CH63_705 770137 770622 - type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_705 CH63_706 CH63_706 CH63_706 770948 772450 - hypothetical protein conserved hypothetical protein~[S] COG3517 Uncharacterized protein conserved in bacteria gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_706 CH63_707 CH63_707 CH63_707 772474 772998 - hypothetical protein conserved hypothetical protein~[S] COG3516 Uncharacterized protein conserved in bacteria gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_707 CH63_708 CH63_708 CH63_708 773103 773711 - fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_708 CH63_709 CH63_709 CH63_709 773696 774853 - outer membrane usher family protein [NU] COG3188 P pilus assembly protein%2C porin PapC gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_709 CH63_71 CH63_71 CH63_71 58399 59406 + hypothetical protein BRO family%2C N-terminal domain protein~[K] COG3617 Prophage antirepressor gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_71 CH63_710 CH63_710 CH63_710 774911 776119 + transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_710 CH63_711 CH63_711 CH63_711 776141 777691 - hypothetical protein papC N-terminal domain protein~[NU] COG3188 P pilus assembly protein%2C porin PapC gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_711 CH63_712 CH63_712 CH63_712 777819 778580 - hypothetical protein pili and flagellar-assembly chaperone%2C PapD N-terminal domain protein~[NU] COG3121 P pilus assembly protein%2C chaperone PapD gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_712 CH63_713 CH63_713 CH63_713 778737 779282 - fimbrial family protein [NU] COG3539 P pilus assembly protein%2C pilin FimA gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_713 CH63_714 CH63_714 clpV clpV 779483 782158 - type VI secretion ATPase%2C ClpV1 family VI_ClpV1: type VI secretion ATPase%2C ClpV1 family~[O] COG0542 ATPases with chaperone activity%2C ATP-binding subunit gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_714 CH63_715 CH63_715 CH63_715 782986 784821 + hypothetical protein conserved hypothetical protein~[S] COG3519 Uncharacterized protein conserved in bacteria gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_715 CH63_716 CH63_716 CH63_716 784821 785846 + hypothetical protein conserved hypothetical protein~[S] COG3520 Uncharacterized protein conserved in bacteria gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_716 CH63_717 CH63_717 CH63_717 785945 787126 + hypothetical protein impA-related N-terminal family protein~[S] COG3515 Uncharacterized protein conserved in bacteria gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_717 CH63_718 CH63_718 CH63_718 787133 788164 + fimbrial family protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_718 CH63_719 CH63_719 CH63_719 788204 789541 + glycosyltransferase family protein gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_719 CH63_72 CH63_72 CH63_72 59520 60056 + hypothetical protein conserved hypothetical protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_72 CH63_720 CH63_720 CH63_720 789538 790239 + putative membrane protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_720 CH63_721 CH63_721 CH63_721 790240 791922 + ompA family protein [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_721 CH63_722 CH63_722 CH63_722 791919 792401 + hypothetical protein conserved hypothetical protein~[S] COG5435 Uncharacterized conserved protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_722 CH63_723 CH63_723 CH63_723 792759 793361 - bacterial regulatory s%2C luxR family protein [K] COG2771 DNA-binding HTH domain-containing proteins gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_723 CH63_724 CH63_724 mltB mltB 794627 795721 - lytic murein transglycosylase B mltB: lytic murein transglycosylase B~[M] COG2951 Membrane-bound lytic murein transglycosylase B gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_724 CH63_725 CH63_725 yfuA yfuA 796050 797069 + yfuA [P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_725 CH63_726 CH63_726 CH63_726 797125 797748 + binding--dependent transport system inner membrane component family protein [P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_726 CH63_727 CH63_727 CH63_727 797765 798712 + binding--dependent transport system inner membrane component family protein [P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_727 CH63_728 CH63_728 CH63_728 798709 799758 + ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_728 CH63_729 CH63_729 CH63_729 799831 800355 - hypothetical protein conserved hypothetical protein~[S] COG4331 Predicted membrane protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_729 CH63_73 CH63_73 CH63_73 60064 60414 + putative lipoprotein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_73 CH63_730 CH63_730 CH63_730 800822 801301 + type VI secretion system effector%2C Hcp1 family protein VI_effect_Hcp1: type VI secretion system effector%2C Hcp1 family protein~[S] COG3157 Hemolysin-coregulated protein (uncharacterized) gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_730 CH63_731 CH63_731 CH63_731 801531 802379 - hypothetical protein conserved hypothetical protein gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_731 CH63_732 CH63_732 CH63_732 803210 805636 + anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family protein dmsA_ynfE: anaerobic dimethyl sulfoxide reductase%2C A subunit%2C DmsA/YnfE family protein~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_732 CH63_733 CH63_733 dmsB dmsB 805648 806265 + dimethylsulfoxide reductase%2C chain B DMSO_dmsB: dimethylsulfoxide reductase%2C chain B~[C] COG0437 Fe-S-cluster-containing hydrogenase components 1 gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_733 CH63_734 CH63_734 CH63_734 806267 807043 + DMSO reductase anchor subunit family protein [R] COG3302 DMSO reductase anchor subunit gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_734 CH63_735 CH63_735 CH63_735 807525 808121 + nitrate reductase delta subunit [R] COG3381 Uncharacterized component of anaerobic dehydrogenases gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_735 CH63_736 CH63_736 CH63_736 808118 808687 + 4Fe-4S binding domain protein [C] COG1145 Ferredoxin gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_736 CH63_737 CH63_737 CH63_737 808933 809589 - hypothetical protein conserved hypothetical protein~[S] COG4380 Uncharacterized protein conserved in bacteria gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_737 CH63_738 CH63_738 CH63_738 809671 809940 - putative lipoprotein [S] COG4259 Uncharacterized protein conserved in bacteria gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_738 CH63_739 CH63_739 CH63_739 809967 810638 - tolB amino-terminal domain protein [M] COG1462 Uncharacterized protein involved in formation of curli polymers gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_739 CH63_74 CH63_74 CH63_74 60494 61090 + bacteriophage lambda tail assembly I family protein [S] COG4723 Phage-related protein%2C tail component gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_74 CH63_740 CH63_740 CH63_740 811228 811659 + hypothetical protein conserved hypothetical protein~[S] COG1598 Uncharacterized conserved protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_740 CH63_741 CH63_741 CH63_741 811754 812278 - hypothetical protein conserved hypothetical protein~[C] COG3038 Cytochrome B561 gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_741 CH63_742 CH63_742 CH63_742 812542 813777 - aminotransferase class I and II family protein [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_742 CH63_743 CH63_743 CH63_743 814043 815290 + phytanoyl-CoA dioxygenase family protein gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_743 CH63_744 CH63_744 glk glk 815368 816339 - glucokinase glk: glucokinase~[G] COG0837 Glucokinase gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_744 CH63_745 CH63_745 CH63_745 816520 816996 - bacterial Transmembrane Pair family protein [S] COG4125 Predicted membrane protein gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_745 CH63_746 CH63_746 CH63_746 817099 817977 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_746 CH63_747 CH63_747 CH63_747 818113 819102 + aldo/keto reductase family protein [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_747 CH63_748 CH63_748 CH63_748 819273 819686 + hypothetical protein conserved hypothetical protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_748 CH63_749 CH63_749 CH63_749 819779 821008 - metal ion transporter%2C metal ion family protein nramp: metal ion transporter%2C metal ion family protein~[P] COG1914 Mn2+ and Fe2+ transporters of the NRAMP family gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_749 CH63_75 CH63_75 CH63_75 61265 61486 - hypothetical protein gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_75 CH63_750 CH63_750 CH63_750 821459 822643 + na+ dependent nucleoside transporter family protein [F] COG1972 Nucleoside permease gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_750 CH63_751 CH63_751 CH63_751 823020 823095 - tRNA-Lys tRNA gene744 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_751 CH63_752 CH63_752 CH63_752 823295 823370 - tRNA-Val tRNA gene745 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_752 CH63_753 CH63_753 CH63_753 823415 823490 - tRNA-Val tRNA gene746 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_753 CH63_754 CH63_754 gltX gltX 823765 825180 + glutamate--tRNA ligase gltX_bact: glutamate--tRNA ligase~[J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_754 CH63_755 CH63_755 CH63_755 825373 825831 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_755 CH63_756 CH63_756 CH63_756 826122 826197 + tRNA-Ala tRNA gene749 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_756 CH63_758 CH63_758 CH63_758 826275 826350 + tRNA-Ala tRNA gene750 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_758 CH63_759 CH63_759 CH63_759 826545 827150 + hypothetical protein conserved hypothetical protein~[S] COG3575 Uncharacterized protein conserved in bacteria gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_759 CH63_76 CH63_76 CH63_76 61132 61296 + hypothetical protein conserved hypothetical protein gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_76 CH63_760 CH63_760 CH63_760 827282 827629 + flxA-like family protein gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_760 CH63_761 CH63_761 CH63_761 827730 827945 - hypothetical protein conserved hypothetical protein~[S] COG3530 Uncharacterized protein conserved in bacteria gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_761 CH63_762 CH63_762 ligA ligA 827965 829977 - DNA ligase%2C NAD-dependent dnlj: DNA ligase%2C NAD-dependent~[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_762 CH63_763 CH63_763 zipA zipA 830068 831054 - cell division protein ZipA septum_zipA: cell division protein ZipA~[D] COG3115 Cell division protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_763 CH63_764 CH63_764 cysZ cysZ 831303 832037 + protein CysZ [E] COG2981 Uncharacterized protein involved in cysteine biosynthesis gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_764 CH63_765 CH63_765 cysK cysK 832194 833162 + cysteine synthase A cysK: cysteine synthase A~[E] COG0031 Cysteine synthase gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_765 CH63_766 CH63_766 ptsH ptsH 833661 833918 + phosphocarrier protein HPr [G] COG1925 Phosphotransferase system%2C HPr-related proteins gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_766 CH63_767 CH63_767 ptsP ptsP 833967 835694 + phosphoenolpyruvate-protein phosphotransferase PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase~[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_767 CH63_768 CH63_768 crr crr 835743 836252 + glucose-specific phosphotransferase enzyme IIA component [G] COG2190 Phosphotransferase system IIA components gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_768 CH63_769 CH63_769 CH63_769 836395 836706 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_769 CH63_77 CH63_77 CH63_77 61662 64865 + fibronectin type III domain protein [S] COG4733 Phage-related protein%2C tail component gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_77 CH63_770 CH63_770 CH63_770 836886 837908 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_770 CH63_771 CH63_771 CH63_771 837908 838285 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_771 CH63_772 CH63_772 CH63_772 838275 838691 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_772 CH63_773 CH63_773 CH63_773 838806 839000 - hypothetical protein conserved hypothetical protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_773 CH63_774 CH63_774 CH63_774 839086 840435 - HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_774 CH63_775 CH63_775 CH63_775 840461 841144 - response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_775 CH63_776 CH63_776 CH63_776 841332 842537 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_776 CH63_777 CH63_777 CH63_777 842568 844577 + ABC transporter family protein [V] COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_777 CH63_778 CH63_778 CH63_778 844832 846478 - FAD dependent oxidoreductase family protein [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_778 CH63_779 CH63_779 CH63_779 846538 847998 - putative membrane protein [ER] COG0591 Na+/proline symporter gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_779 CH63_78 CH63_78 CH63_78 64865 65863 + hypothetical protein conserved hypothetical protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_78 CH63_780 CH63_780 CH63_780 847995 848192 - hypothetical protein conserved hypothetical protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_780 CH63_781 CH63_781 CH63_781 848335 849366 - hypothetical protein creatinase/Prolidase N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_781 CH63_782 CH63_782 CH63_782 849363 849554 - hypothetical protein creatinase/Prolidase N-terminal domain protein~[E] COG0006 Xaa-Pro aminopeptidase gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_782 CH63_783 CH63_783 CH63_783 849588 850769 - C-S lyase family protein C_S_lyase_PatB: C-S lyase family protein~[E] COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_783 CH63_784 CH63_784 CH63_784 851477 852895 + von Willebrand factor type A domain protein [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_784 CH63_785 CH63_785 CH63_785 853128 854672 + his Kinase A domain protein [T] COG0642 Signal transduction histidine kinase gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_785 CH63_786 CH63_786 phoP phoP 854669 855376 + transcriptional regulatory protein phoP [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_786 CH63_787 CH63_787 CH63_787 855756 856988 - hypothetical protein conserved hypothetical protein~[S] COG4886 Leucine-rich repeat (LRR) protein gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_787 CH63_788 CH63_788 cysM cysM 857233 858111 - cysteine synthase B cysM: cysteine synthase B~[E] COG0031 Cysteine synthase gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_788 CH63_789 CH63_789 cysA cysA 858282 859373 - sulfate ABC transporter%2C ATP-binding family protein 3a0106s01: sulfate ABC transporter%2C ATP-binding family protein~[P] COG1118 ABC-type sulfate/molybdate transport systems%2C ATPase component gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_789 CH63_79 CH63_79 CH63_79 65880 66797 + hypothetical protein conserved hypothetical protein gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_79 CH63_790 CH63_790 cysW cysW 859363 860238 - sulfate ABC transporter%2C permease protein CysW permease_CysW: sulfate ABC transporter%2C permease protein CysW~[P] COG4208 ABC-type sulfate transport system%2C permease component gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_790 CH63_791 CH63_791 cysT cysT 860238 861071 - sulfate ABC transporter%2C permease protein CysT permease_CysT: sulfate ABC transporter%2C permease protein CysT~[O] COG0555 ABC-type sulfate transport system%2C permease component gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_791 CH63_792 CH63_792 CH63_792 861071 861724 - sulfate ABC transporter%2C sulfate-binding family protein 3a0106s03: sulfate ABC transporter%2C sulfate-binding family protein~[P] COG4150 ABC-type sulfate transport system%2C periplasmic component gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_792 CH63_793 CH63_793 cysP cysP 861806 862108 - sulfate/thiosulfate ABC transporter%2C periplasmic sulfate/thiosulfate-binding domain protein [P] COG4150 ABC-type sulfate transport system%2C periplasmic component gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_793 CH63_794 CH63_794 CH63_794 862423 863955 - putative sialic acid transporter [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_794 CH63_795 CH63_795 CH63_795 864560 865438 - SIS domain protein [K] COG1737 Transcriptional regulators gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_795 CH63_796 CH63_796 CH63_796 865627 866097 - yhcH/YjgK/YiaL family protein [G] COG2731 Beta-galactosidase%2C beta subunit gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_796 CH63_797 CH63_797 nanK nanK 866179 867051 - N-acetylmannosamine kinase [KG] COG1940 Transcriptional regulator/sugar kinase gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_797 CH63_798 CH63_798 yopM yopM 867320 868447 + outer membrane protein yopM [S] COG4886 Leucine-rich repeat (LRR) protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_798 CH63_799 CH63_799 CH63_799 868653 869354 + N-acetylmannosamine-6-phosphate epimerase family protein [G] COG3010 Putative N-acetylmannosamine-6-phosphate epimerase gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_799 CH63_8 CH63_8 msbB msbB 6561 7523 + lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase~[M] COG1560 Lauroyl/myristoyl acyltransferase gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_8 CH63_80 CH63_80 CH63_80 66808 67227 + caudovirales tail fiber assembly family protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_80 CH63_800 CH63_800 CH63_800 869417 870310 + dihydrodipicolinate synthetase family protein [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_800 CH63_801 CH63_801 CH63_801 870408 871307 - Dyp-type peroxidase family protein dyp_perox_fam: Dyp-type peroxidase family protein~[P] COG2837 Predicted iron-dependent peroxidase gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_801 CH63_802 CH63_802 CH63_802 871485 872096 - hypothetical protein conserved hypothetical protein gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_802 CH63_803 CH63_803 CH63_803 872455 872868 + OB-fold nucleic acid binding domain protein [S] COG3111 Uncharacterized conserved protein gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_803 CH63_804 CH63_804 CH63_804 873355 875634 + outer membrane autotransporter barrel domain protein autotrans_barl: outer membrane autotransporter barrel domain protein~[MU] COG3468 Type V secretory pathway%2C adhesin AidA gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_804 CH63_805 CH63_805 CH63_805 875726 876142 - putative membrane protein gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_805 CH63_806 CH63_806 CH63_806 876248 876433 + hypothetical protein conserved hypothetical protein gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_806 CH63_807 CH63_807 CH63_807 876615 877040 - acetyltransferase domain protein [R] COG0456 Acetyltransferases gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_807 CH63_808 CH63_808 CH63_808 877323 878252 + coproporphyrinogen III oxidase family protein [H] COG0408 Coproporphyrinogen III oxidase gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_808 CH63_809 CH63_809 CH63_809 878252 878710 + hypothetical protein conserved hypothetical protein~[S] COG1671 Uncharacterized protein conserved in bacteria gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_809 CH63_81 CH63_81 CH63_81 67448 68656 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_81 CH63_810 CH63_810 CH63_810 878861 881140 - malic enzyme%2C NAD binding domain protein [C] COG0281 Malic enzyme gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_810 CH63_811 CH63_811 CH63_811 881336 881932 - nudix-type nucleoside diphosphatase%2C YffH/AdpP family protein [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_811 CH63_812 CH63_812 CH63_812 882117 882716 - periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family protein napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome%2C NapC/NirT family protein~[C] COG3005 Nitrate/TMAO reductases%2C membrane-bound tetraheme cytochrome c subunit gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_812 CH63_813 CH63_813 CH63_813 882744 883145 - nitrate reductase cytochrome c-type subunit family protein [C] COG3043 Nitrate reductase cytochrome c-type subunit gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_813 CH63_814 CH63_814 napA napA 883294 885786 - periplasmic nitrate reductase%2C large subunit NAPA: periplasmic nitrate reductase%2C large subunit~[C] COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_814 CH63_815 CH63_815 CH63_815 885783 886049 - napD family protein [P] COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_815 CH63_816 CH63_816 napF napF 886039 886542 - ferredoxin-type protein NapF napF: ferredoxin-type protein NapF~[C] COG1145 Ferredoxin gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_816 CH63_817 CH63_817 CH63_817 887375 888004 + bacterial regulatory s%2C luxR family protein [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_817 CH63_818 CH63_818 CH63_818 888017 888295 - winged helix-turn helix family protein [S] COG4519 Uncharacterized protein conserved in bacteria gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_818 CH63_819 CH63_819 CH63_819 888710 889513 + acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_819 CH63_82 CH63_82 CH63_82 68961 70133 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_82 CH63_820 CH63_820 CH63_820 889573 891720 + RND transporter%2C hydrophobe/amphiphile efflux-1 family protein 2A0602: RND transporter%2C hydrophobe/amphiphile efflux-1 family protein~[V] COG0841 Cation/multidrug efflux pump gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_820 CH63_821 CH63_821 CH63_821 891720 891839 + hypothetical protein [V] COG0841 Cation/multidrug efflux pump gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_821 CH63_822 CH63_822 CH63_822 892070 892654 + hypothetical protein conserved hypothetical protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_822 CH63_823 CH63_823 CH63_823 892943 893491 + hypothetical protein conserved hypothetical protein~[R] COG1988 Predicted membrane-bound metal-dependent hydrolases gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_823 CH63_824 CH63_824 CH63_824 894245 895420 - anaerobic sulfatase maturase sulfatase_rSAM: anaerobic sulfatase maturase~[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_824 CH63_825 CH63_825 CH63_825 895478 897148 - type I phosphodiesterase / nucleotide pyrophosphatase family protein [P] COG3119 Arylsulfatase A and related enzymes gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_825 CH63_826 CH63_826 CH63_826 897629 898699 - ABC transporter family protein [E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_826 CH63_827 CH63_827 CH63_827 898692 900461 - binding--dependent transport system inner membrane component family protein [P] COG1178 ABC-type Fe3+ transport system%2C permease component gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_827 CH63_828 CH63_828 CH63_828 900556 901644 - bacterial extracellular solute-binding family protein [P] COG1840 ABC-type Fe3+ transport system%2C periplasmic component gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_828 CH63_829 CH63_829 CH63_829 901955 902428 + tetratricopeptide repeat family protein [R] COG0457 FOG: TPR repeat gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_829 CH63_83 CH63_83 CH63_83 70137 71336 - beta-eliminating lyase family protein [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_83 CH63_830 CH63_830 CH63_830 902588 902986 + transcriptional regulator%2C Spx/MgsR family protein arsC_related: transcriptional regulator%2C Spx/MgsR family protein~[P] COG1393 Arsenate reductase and related proteins%2C glutaredoxin family gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_830 CH63_831 CH63_831 dapE dapE 902988 904115 + succinyl-diaminopimelate desuccinylase dapE_proteo: succinyl-diaminopimelate desuccinylase~[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_831 CH63_832 CH63_832 CH63_832 904139 904789 + D-alanyl-D-alanine carboxypeptidase family protein [M] COG1876 D-alanyl-D-alanine carboxypeptidase gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_832 CH63_833 CH63_833 CH63_833 904857 905051 + hypothetical protein conserved hypothetical protein gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_833 CH63_834 CH63_834 CH63_834 905256 907355 - acetyltransferase family protein [R] COG1444 Predicted P-loop ATPase fused to an acetyltransferase gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_834 CH63_835 CH63_835 CH63_835 907357 907809 - hypothetical protein conserved hypothetical protein~[S] COG2707 Predicted membrane protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_835 CH63_836 CH63_836 CH63_836 907903 908769 - neutral zinc metallopeptidase family protein [R] COG2321 Predicted metalloprotease gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_836 CH63_837 CH63_837 purC purC 908988 909701 - phosphoribosylaminoimidazolesuccinocarboxamide synthase purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase~[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_837 CH63_838 CH63_838 CH63_838 909849 910307 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_838 CH63_839 CH63_839 CH63_839 910482 911540 - nlpB/DapX lipofamily protein [M] COG3317 Uncharacterized lipoprotein gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_839 CH63_84 CH63_84 CH63_84 71353 72093 - hypothetical protein conserved hypothetical protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_84 CH63_840 CH63_840 dapA dapA 911558 912439 - 4-hydroxy-tetrahydrodipicolinate synthase dapA: 4-hydroxy-tetrahydrodipicolinate synthase~[EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_840 CH63_841 CH63_841 CH63_841 912604 913173 + ACT domain protein [E] COG2716 Glycine cleavage system regulatory protein gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_841 CH63_842 CH63_842 CH63_842 913176 913646 + putative peroxiredoxin bcp [O] COG1225 Peroxiredoxin gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_842 CH63_843 CH63_843 CH63_843 913890 914309 - putative exported protein gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_843 CH63_844 CH63_844 CH63_844 914313 915008 - hypothetical protein conserved hypothetical protein gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_844 CH63_845 CH63_845 CH63_845 915608 916672 - hypothetical protein conserved hypothetical protein~[R] COG0628 Predicted permease gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_845 CH63_846 CH63_846 CH63_846 917003 918487 + peptidase M48 family protein [R] COG4783 Putative Zn-dependent protease%2C contains TPR repeats gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_846 CH63_847 CH63_847 arsC arsC 918594 918950 + arsenate reductase arsC: arsenate reductase~[P] COG1393 Arsenate reductase and related proteins%2C glutaredoxin family gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_847 CH63_848 CH63_848 hda hda 919162 919869 - DnaA regulatory inactivator Hda dnaA_homol_Hda: DnaA regulatory inactivator Hda~[L] COG0593 ATPase involved in DNA replication initiation gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_848 CH63_849 CH63_849 CH63_849 920057 920515 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_849 CH63_85 CH63_85 CH63_85 73185 73541 + hypothetical protein conserved hypothetical protein gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_85 CH63_850 CH63_850 upp upp 920691 921317 - uracil phosphoribosyltransferase upp: uracil phosphoribosyltransferase~[F] COG0035 Uracil phosphoribosyltransferase gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_850 CH63_851 CH63_851 purM purM 921714 922757 + phosphoribosylformylglycinamidine cyclo-ligase purM: phosphoribosylformylglycinamidine cyclo-ligase~[F] COG0150 Phosphoribosylaminoimidazole (AIR) synthetase gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_851 CH63_852 CH63_852 purN purN 922872 923510 + phosphoribosylglycinamide formyltransferase purN: phosphoribosylglycinamide formyltransferase~[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_852 CH63_853 CH63_853 speG speG 923739 924284 + spermidine N(1)-acetyltransferase [J] COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_853 CH63_854 CH63_854 CH63_854 924378 924902 - hypothetical protein conserved hypothetical protein gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_854 CH63_855 CH63_855 CH63_855 924880 925101 - hypothetical protein conserved hypothetical protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_855 CH63_856 CH63_856 fliU fliU 925188 925568 - flagellar biosynthetic protein fliU gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_856 CH63_857 CH63_857 pstB pstB 925796 926608 - phosphate ABC transporter%2C ATP-binding protein 3a0107s01c2: phosphate ABC transporter%2C ATP-binding protein~[P] COG1117 ABC-type phosphate transport system%2C ATPase component gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_857 CH63_858 CH63_858 pstA pstA 926636 928222 - phosphate ABC transporter%2C permease protein PstA 3a0107s02c: phosphate ABC transporter%2C permease protein PstA~[P] COG4985 ABC-type phosphate transport system%2C auxiliary component gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_858 CH63_859 CH63_859 CH63_859 928348 930578 - putative phosphate transport system permease protein PstC%3Bputative membrane protein pseudogene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_859 CH63_86 CH63_86 CH63_86 73958 74488 - disulfide bond formation DsbB family protein [O] COG1495 Disulfide bond formation protein DsbB gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_86 CH63_861 CH63_861 ppk1 ppk1 930849 932912 + polyphosphate kinase 1 poly_P_kin: polyphosphate kinase 1~[P] COG0855 Polyphosphate kinase gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_861 CH63_862 CH63_862 CH63_862 932923 934482 + ppx/GppA phosphatase family protein [FP] COG0248 Exopolyphosphatase gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_862 CH63_863 CH63_863 mgtE mgtE 934858 936333 + magnesium transporter mgtE: magnesium transporter~[P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_863 CH63_864 CH63_864 CH63_864 936473 937825 + hsp70 family protein [O] COG0443 Molecular chaperone gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_864 CH63_865 CH63_865 CH63_865 938097 938945 - binding--dependent transport system inner membrane component family protein [E] COG1177 ABC-type spermidine/putrescine transport system%2C permease component II gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_865 CH63_866 CH63_866 CH63_866 939007 940272 - binding--dependent transport system inner membrane component family protein [E] COG1176 ABC-type spermidine/putrescine transport system%2C permease component I gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_866 CH63_867 CH63_867 CH63_867 940319 941347 - bacterial extracellular solute-binding family protein [E] COG0687 Spermidine/putrescine-binding periplasmic protein gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_867 CH63_868 CH63_868 gabT gabT 941400 942689 - 4-aminobutyrate transaminase GABAtrnsam: 4-aminobutyrate transaminase~[E] COG0160 4-aminobutyrate aminotransferase and related aminotransferases gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_868 CH63_869 CH63_869 CH63_869 942871 944376 + aminotransferase class I and II family protein [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_869 CH63_87 CH63_87 nhaB nhaB 74724 76298 - Na+/H+ antiporter NhaB nhaB: Na+/H+ antiporter NhaB~[P] COG3067 Na+/H+ antiporter gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_87 CH63_870 CH63_870 CH63_870 944759 945844 + polyamine ABC transporter%2C ATP-binding family protein potA: polyamine ABC transporter%2C ATP-binding family protein~[E] COG3842 ABC-type spermidine/putrescine transport systems%2C ATPase components gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_870 CH63_871 CH63_871 CH63_871 946208 947542 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_871 CH63_872 CH63_872 CH63_872 947542 950700 + acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_872 CH63_873 CH63_873 CH63_873 950697 953771 + acrB/AcrD/AcrF family protein [V] COG0841 Cation/multidrug efflux pump gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_873 CH63_874 CH63_874 CH63_874 953805 955202 + major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_874 CH63_875 CH63_875 CH63_875 955233 956348 + HAMP domain protein [T] COG0642 Signal transduction histidine kinase gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_875 CH63_876 CH63_876 CH63_876 956627 957346 + response regulator [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_876 CH63_877 CH63_877 CH63_877 957483 957821 + hypothetical protein conserved hypothetical protein~[S] COG3422 Uncharacterized conserved protein gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_877 CH63_878 CH63_878 CH63_878 958096 959490 + peptidase U32 family protein [O] COG0826 Collagenase and related proteases gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_878 CH63_879 CH63_879 yegS yegS 960126 961016 + lipid kinase YegS lip_kinase_YegS: lipid kinase YegS~[IR] COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_879 CH63_88 CH63_88 fadR fadR 76542 77261 + fatty acid metabolism transcriptional regulator FadR fadR_gamma: fatty acid metabolism transcriptional regulator FadR~[K] COG2186 Transcriptional regulators gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_88 CH63_880 CH63_880 ivy ivy 961303 961811 - inhibitor of vertebrate lysozyme%3Bputative membrane protein pseudogene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_880 CH63_882 CH63_882 CH63_882 962042 962212 + hypothetical protein conserved hypothetical protein gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_882 CH63_883 CH63_883 CH63_883 962184 962930 + hypothetical protein conserved hypothetical protein gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_883 CH63_884 CH63_884 thiD thiD 962992 963792 - hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase~[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_884 CH63_885 CH63_885 CH63_885 964314 964781 + hypothetical protein conserved hypothetical protein gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_885 CH63_886 CH63_886 CH63_886 964840 965118 + hypothetical protein conserved hypothetical protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_886 CH63_887 CH63_887 CH63_887 965130 966338 - transposase%2C Mutator family protein [L] COG3328 Transposase and inactivated derivatives gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_887 CH63_888 CH63_888 CH63_888 966513 966827 - hypothetical protein conserved hypothetical protein gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_888 CH63_889 CH63_889 CH63_889 966911 967129 - hypothetical protein conserved hypothetical protein gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_889 CH63_89 CH63_89 CH63_89 77479 79014 - spoVR like family protein [S] COG2719 Uncharacterized conserved protein gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_89 CH63_890 CH63_890 CH63_890 967288 967614 - putative molecular chaperone gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_890 CH63_891 CH63_891 CH63_891 967648 967842 - hypothetical protein conserved hypothetical protein gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_891 CH63_892 CH63_892 CH63_892 968371 968604 - DDE superendonuclease family protein [L] COG3335 Transposase and inactivated derivatives gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_892 CH63_893 CH63_893 CH63_893 968660 968926 - putative transposase [L] COG3335 Transposase and inactivated derivatives gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_893 CH63_894 CH63_894 CH63_894 969056 970411 - hypothetical protein conserved hypothetical protein~[LKJ] COG0513 Superfamily II DNA and RNA helicases gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_894 CH63_895 CH63_895 CH63_895 970802 971512 + bacterial regulatory s%2C tetR family protein [K] COG1309 Transcriptional regulator gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_895 CH63_896 CH63_896 CH63_896 971564 972550 + efflux transporter%2C RND family%2C MFP subunit RND_mfp: efflux transporter%2C RND family%2C MFP subunit~[M] COG0845 Membrane-fusion protein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_896 CH63_897 CH63_897 ccmA ccmA 972564 974306 + heme ABC exporter%2C ATP-binding protein CcmA ccmA: heme ABC exporter%2C ATP-binding protein CcmA~[V] COG1131 ABC-type multidrug transport system%2C ATPase component gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_897 CH63_898 CH63_898 CH63_898 974311 975486 + ABC-2 type transporter family protein [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_898 CH63_899 CH63_899 ybhR ybhR 975499 976605 + inner membrane transport permease ybhR [V] COG0842 ABC-type multidrug transport system%2C permease component gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_899 CH63_9 CH63_9 pyk pyk 7868 9310 - pyruvate kinase pyruv_kin: pyruvate kinase~[G] COG0469 Pyruvate kinase gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_9 CH63_90 CH63_90 CH63_90 79480 80784 + ketopantoate reductase PanE/ApbA family protein [E] COG0665 Glycine/D-amino acid oxidases (deaminating) gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_90 CH63_900 CH63_900 CH63_900 976644 976970 - hypothetical protein conserved hypothetical family protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_900 CH63_901 CH63_901 CH63_901 978675 979784 - flavin oxidoreductase / NADH oxidase family protein NADH:flavin oxidoreductase / NADH oxidase family protein~[C] COG1902 NADH:flavin oxidoreductases%2C Old Yellow Enzyme family gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_901 CH63_902 CH63_902 CH63_902 977763 978674 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_902 CH63_903 CH63_903 CH63_903 980132 981496 - bacterial regulatory%2C Fis family protein [T] COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_903 CH63_904 CH63_904 CH63_904 981483 983297 - sensory box protein [T] COG0642 Signal transduction histidine kinase gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_904 CH63_905 CH63_905 zraP zraP 983655 984128 + zinc resistance-associated protein [UNTP] COG3678 P pilus assembly/Cpx signaling pathway%2C periplasmic inhibitor/zinc-resistance associated protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_905 CH63_906 CH63_906 CH63_906 984216 984821 - major Facilitator Superfamily protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_906 CH63_907 CH63_907 CH63_907 984934 985392 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_907 CH63_908 CH63_908 CH63_908 985382 986182 - lacY proton/sugar symporter family protein [GEPR] COG0477 Permeases of the major facilitator superfamily gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_908 CH63_909 CH63_909 xapA xapA 986321 987184 - xanthosine phosphorylase XAPA: xanthosine phosphorylase~[F] COG0005 Purine nucleoside phosphorylase gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_909 CH63_91 CH63_91 CH63_91 80800 82002 - drug resistance transporter%2C Bcr/CflA subfamily protein efflux_Bcr_CflA: drug resistance transporter%2C Bcr/CflA subfamily protein~[GEPR] COG0477 Permeases of the major facilitator superfamily gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_91 CH63_910 CH63_910 CH63_910 987497 988378 + eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_910 CH63_911 CH63_911 CH63_911 988416 989309 - bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_911 CH63_912 CH63_912 CH63_912 989541 991589 - transporter%2C betaine/carnitine/choline transporter family protein bcct: transporter%2C betaine/carnitine/choline transporter family protein~[M] COG1292 Choline-glycine betaine transporter gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_912 CH63_913 CH63_913 betI betI 991954 992550 + transcriptional repressor BetI betaine_BetI: transcriptional repressor BetI~[K] COG1309 Transcriptional regulator gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_913 CH63_914 CH63_914 betB betB 992608 994080 + betaine-aldehyde dehydrogenase BADH: betaine-aldehyde dehydrogenase~[C] COG1012 NAD-dependent aldehyde dehydrogenases gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_914 CH63_915 CH63_915 betA betA 994103 995668 + choline dehydrogenase betA: choline dehydrogenase~[E] COG2303 Choline dehydrogenase and related flavoproteins gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_915 CH63_916 CH63_916 CH63_916 996034 996492 - transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_916 CH63_917 CH63_917 CH63_917 996727 997437 - inhibitor of apoptosis-promoting Bax1 family protein [R] COG0670 Integral membrane protein%2C interacts with FtsH gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_917 CH63_918 CH63_918 CH63_918 997580 998032 - moaE family protein [H] COG0314 Molybdopterin converting factor%2C large subunit gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_918 CH63_919 CH63_919 moaD moaD 998035 998280 - molybdopterin converting factor%2C subunit 1 moaD: molybdopterin converting factor%2C subunit 1~[H] COG1977 Molybdopterin converting factor%2C small subunit gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_919 CH63_92 CH63_92 CH63_92 82267 83136 - pirin family protein [R] COG1741 Pirin-related protein gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_92 CH63_920 CH63_920 moaC moaC 998277 998756 - molybdenum cofactor biosynthesis protein C moaC: molybdenum cofactor biosynthesis protein C~[H] COG0315 Molybdenum cofactor biosynthesis enzyme gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_920 CH63_921 CH63_921 moaA moaA 998857 999837 - molybdenum cofactor biosynthesis protein A moaA: molybdenum cofactor biosynthesis protein A~[H] COG2896 Molybdenum cofactor biosynthesis enzyme gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_921 CH63_922 CH63_922 CH63_922 1000089 1000235 + hypothetical protein conserved hypothetical protein gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_922 CH63_923 CH63_923 CH63_923 1000369 1001292 + hypothetical protein cofD_related: conserved hypothetical family protein~[S] COG0391 Uncharacterized conserved protein gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_923 CH63_924 CH63_924 CH63_924 1001423 1001668 - hypothetical protein conserved hypothetical protein~[S] COG4628 Uncharacterized conserved protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_924 CH63_925 CH63_925 uvrB uvrB 1001960 1003975 - excinuclease ABC subunit B uvrb: excinuclease ABC subunit B~[L] COG0556 Helicase subunit of the DNA excision repair complex gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_925 CH63_926 CH63_926 CH63_926 1005065 1005775 + ABC transporter family protein [E] COG0410 ABC-type branched-chain amino acid transport systems%2C ATPase component gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_926 CH63_927 CH63_927 bioD bioD 1005927 1006649 - dethiobiotin synthase bioD: dethiobiotin synthase~[H] COG0132 Dethiobiotin synthetase gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_927 CH63_928 CH63_928 bioC bioC 1006642 1007445 - malonyl-acyl carrier protein O-methyltransferase BioC bioC: malonyl-acyl carrier protein O-methyltransferase BioC~[QR] COG0500 SAM-dependent methyltransferases gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_928 CH63_929 CH63_929 bioF bioF 1007429 1008580 - 8-amino-7-oxononanoate synthase bioF: 8-amino-7-oxononanoate synthase~[H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_929 CH63_93 CH63_93 CH63_93 83334 84239 + bacterial regulatory helix-turn-helix%2C lysR family protein [K] COG0583 Transcriptional regulator gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_93 CH63_930 CH63_930 bioB bioB 1008580 1009617 - biotin synthase bioB: biotin synthase~[H] COG0502 Biotin synthase and related enzymes gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_930 CH63_931 CH63_931 bioA bioA 1009716 1010996 + adenosylmethionine-8-amino-7-oxononanoate transaminase bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase~[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_931 CH63_932 CH63_932 CH63_932 1011181 1012185 - lactonase%2C 7-bladed beta-propeller family protein [G] COG2706 3-carboxymuconate cyclase gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_932 CH63_933 CH63_933 CH63_933 1012476 1013297 + Cof-like hydrolase family protein cof-sub: Cof-like hydrolase family protein~[R] COG0561 Predicted hydrolases of the HAD superfamily gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_933 CH63_934 CH63_934 modC modC 1013353 1014432 - molybdate ABC transporter%2C ATP-binding protein modC_ABC: molybdate ABC transporter%2C ATP-binding protein~[P] COG4148 ABC-type molybdate transport system%2C ATPase component gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_934 CH63_935 CH63_935 modB modB 1014426 1015121 - molybdate ABC transporter%2C permease protein modB_ABC: molybdate ABC transporter%2C permease protein~[P] COG4149 ABC-type molybdate transport system%2C permease component gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_935 CH63_936 CH63_936 modA modA 1015121 1015900 - molybdate ABC transporter%2C periplasmic molybdate-binding protein modA: molybdate ABC transporter%2C periplasmic molybdate-binding protein~[P] COG0725 ABC-type molybdate transport system%2C periplasmic component gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_936 CH63_937 CH63_937 CH63_937 1016135 1016287 - hypothetical protein conserved hypothetical protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_937 CH63_938 CH63_938 CH63_938 1016587 1017378 + ModE molybdate transport repressor domain protein modE_repress: ModE molybdate transport repressor domain protein~[R] COG2005 N-terminal domain of molybdenum-binding protein gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_938 CH63_939 CH63_939 CH63_939 1017488 1018978 + ABC transporter family protein [P] COG1119 ABC-type molybdenum transport system%2C ATPase component/photorepair protein PhrA gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_939 CH63_94 CH63_94 CH63_94 84274 85392 - eamA-like transporter family protein [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_94 CH63_940 CH63_940 CH63_940 1019012 1019140 + hypothetical protein conserved hypothetical protein gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_940 CH63_941 CH63_941 CH63_941 1019195 1020013 + CAAX protease self-immunity family protein [R] COG1266 Predicted metal-dependent membrane protease gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_941 CH63_942 CH63_942 galE galE 1020373 1021389 + UDP-glucose 4-epimerase GalE galE: UDP-glucose 4-epimerase GalE~[M] COG1087 UDP-glucose 4-epimerase gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_942 CH63_943 CH63_943 galT galT 1021399 1022451 + galactose-1-phosphate uridylyltransferase galT_1: galactose-1-phosphate uridylyltransferase~[C] COG1085 Galactose-1-phosphate uridylyltransferase gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_943 CH63_944 CH63_944 galK galK 1022448 1023599 + galactokinase gal_kin: galactokinase~[G] COG0153 Galactokinase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_944 CH63_945 CH63_945 galM galM 1023593 1023745 + galactose mutarotase gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_945 CH63_946 CH63_946 galM galM 1023766 1024662 + galactose mutarotase galM_Leloir: galactose mutarotase~[G] COG2017 Galactose mutarotase and related enzymes gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_946 CH63_947 CH63_947 CH63_947 1024955 1025290 + psiF repeat family protein gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_947 CH63_948 CH63_948 CH63_948 1025637 1026389 + phosphoglycerate mutase 1 family protein pgm_1: phosphoglycerate mutase 1 family protein~[G] COG0588 Phosphoglycerate mutase 1 gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_948 CH63_949 CH63_949 CH63_949 1026571 1027623 - 3-deoxy-7-phosphoheptulonate synthase aroFGH: 3-deoxy-7-phosphoheptulonate synthase~[E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_949 CH63_95 CH63_95 CH63_95 85500 86774 - hypothetical protein conserved hypothetical protein~[S] COG2718 Uncharacterized conserved protein gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_95 CH63_950 CH63_950 CH63_950 1027913 1028020 - hypothetical protein conserved hypothetical protein gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_950 CH63_951 CH63_951 CH63_951 1028072 1029010 + cation diffusion facilitator transporter family protein CDF: cation diffusion facilitator transporter family protein~[P] COG1230 Co/Zn/Cd efflux system component gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_951 CH63_952 CH63_952 pnuC pnuC 1029125 1029850 - nicotinamide mononucleotide transporter PnuC family protein NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC family protein~[H] COG3201 Nicotinamide mononucleotide transporter gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_952 CH63_953 CH63_953 nadA nadA 1029972 1031033 - quinolinate synthetase complex%2C A subunit nadA: quinolinate synthetase complex%2C A subunit~[H] COG0379 Quinolinate synthase gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_953 CH63_954 CH63_954 CH63_954 1031402 1031471 - tRNA-OTHER tRNA tRNA gene944 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_954 CH63_955 CH63_955 CH63_955 1031500 1031575 - tRNA-Lys tRNA gene945 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_955 CH63_956 CH63_956 CH63_956 1031603 1031678 - tRNA-Lys tRNA gene946 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_956 CH63_957 CH63_957 ygbF ygbF 1031869 1032678 - tol-pal system protein YbgF tol_pal_ybgF: tol-pal system protein YbgF~[S] COG1729 Uncharacterized protein conserved in bacteria gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_957 CH63_958 CH63_958 pal pal 1032688 1033194 - peptidoglycan-associated lipoprotein pal_lipo: peptidoglycan-associated lipoprotein~[M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_958 CH63_959 CH63_959 tolB tolB 1033245 1034537 - Tol-Pal system beta propeller repeat protein TolB propeller_TolB: Tol-Pal system beta propeller repeat protein TolB~[U] COG0823 Periplasmic component of the Tol biopolymer transport system gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_959 CH63_96 CH63_96 CH63_96 86924 88858 - hypothetical protein prkA serine kinase C-terminal domain protein~[T] COG2766 Putative Ser protein kinase gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_96 CH63_960 CH63_960 tolA tolA 1034657 1035823 - protein TolA tolA_full: protein TolA~[M] COG3064 Membrane protein involved in colicin uptake gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_960 CH63_961 CH63_961 tolR tolR 1035935 1036363 - protein TolR tolR: protein TolR~[U] COG0848 Biopolymer transport protein gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_961 CH63_962 CH63_962 tolQ tolQ 1036376 1037062 - protein TolQ tolQ: protein TolQ~[U] COG0811 Biopolymer transport proteins gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_962 CH63_963 CH63_963 ybgC ybgC 1037062 1037463 - tol-pal system-associated acyl-CoA thioesterase thio_ybgC: tol-pal system-associated acyl-CoA thioesterase~[R] COG0824 Predicted thioesterase gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_963 CH63_964 CH63_964 CH63_964 1037595 1037882 - cyd operon protein YbgE cyd_oper_ybgE: cyd operon protein YbgE~[S] COG3790 Predicted membrane protein gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_964 CH63_965 CH63_965 CH63_965 1037872 1038006 - cyd operon protein YbgT cyd_oper_ybgT: cyd operon protein YbgT~[S] COG4890 Predicted outer membrane lipoprotein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_965 CH63_966 CH63_966 cydB cydB 1038019 1039158 - cytochrome d ubiquinol oxidase%2C subunit II cydB: cytochrome d ubiquinol oxidase%2C subunit II~[C] COG1294 Cytochrome bd-type quinol oxidase%2C subunit 2 gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_966 CH63_967 CH63_967 cydA cydA 1039173 1040741 - cytochrome d ubiquinol oxidase subunit 1 [C] COG1271 Cytochrome bd-type quinol oxidase%2C subunit 1 gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_967 CH63_968 CH63_968 sucD sucD 1041508 1042380 - succinate-CoA ligase%2C alpha subunit sucCoAalpha: succinate-CoA ligase%2C alpha subunit~[C] COG0074 Succinyl-CoA synthetase%2C alpha subunit gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_968 CH63_969 CH63_969 sucC sucC 1042380 1043546 - succinyl-CoA ligase [ADP-forming] subunit beta [C] COG0045 Succinyl-CoA synthetase%2C beta subunit gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_969 CH63_97 CH63_97 CH63_97 89281 90051 + mltA-interacting MipA family protein [M] COG3713 Outer membrane protein V gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_97 CH63_970 CH63_970 sucB sucB 1043659 1044882 - dihydrolipoyllysine-residue succinyltransferase%2C E2 component of oxoglutarate dehydrogenase complex sucB: dihydrolipoyllysine-residue succinyltransferase%2C E2 component of oxoglutarate dehydrogenase complex~[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide acyltransferase (E2) component%2C and related enzymes gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_970 CH63_971 CH63_971 sucA sucA 1044912 1047719 - oxoglutarate dehydrogenase (succinyl-transferring)%2C E1 component 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring)%2C E1 component~[C] COG0567 2-oxoglutarate dehydrogenase complex%2C dehydrogenase (E1) component%2C and related enzymes gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_971 CH63_972 CH63_972 CH63_972 1048075 1048791 - succinate dehydrogenase and fumarate reductase iron-sulfur family protein dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur family protein~[C] COG0479 Succinate dehydrogenase/fumarate reductase%2C Fe-S protein subunit gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_972 CH63_973 CH63_973 sdhA sdhA 1048841 1050607 - succinate dehydrogenase%2C flavoprotein subunit sdhA_forward: succinate dehydrogenase%2C flavoprotein subunit~[C] COG1053 Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_973 CH63_974 CH63_974 sdhD sdhD 1050608 1050955 - succinate dehydrogenase%2C hydrophobic membrane anchor protein succ_dehyd_anc: succinate dehydrogenase%2C hydrophobic membrane anchor protein~[C] COG2142 Succinate dehydrogenase%2C hydrophobic anchor subunit gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_974 CH63_975 CH63_975 sdhC sdhC 1050949 1051164 - succinate dehydrogenase%2C cytochrome b556 subunit succ_dehyd_cytB: succinate dehydrogenase%2C cytochrome b556 subunit~[C] COG2009 Succinate dehydrogenase/fumarate reductase%2C cytochrome b subunit gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_975 CH63_976 CH63_976 gltA gltA 1052048 1053328 + citrate (Si)-synthase cit_synth_I: citrate (Si)-synthase~[C] COG0372 Citrate synthase gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_976 CH63_977 CH63_977 CH63_977 1053436 1054014 - grpE family protein [O] COG0576 Molecular chaperone GrpE (heat shock protein) gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_977 CH63_978 CH63_978 CH63_978 1054252 1055019 + ATP-NAD kinase family protein [G] COG0061 Predicted sugar kinase gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_978 CH63_979 CH63_979 recN recN 1055106 1056767 + DNA repair protein RecN recN: DNA repair protein RecN~[L] COG0497 ATPase involved in DNA repair gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_979 CH63_98 CH63_98 CH63_98 90124 90999 - aldose 1-epimerase family protein [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_98 CH63_980 CH63_980 smpA smpA 1056881 1057222 + small protein A [J] COG2913 Small protein A (tmRNA-binding) gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_980 CH63_981 CH63_981 CH63_981 1057372 1057656 - rnfH Ubiquitin family protein [S] COG2914 Uncharacterized protein conserved in bacteria gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_981 CH63_982 CH63_982 CH63_982 1057649 1058083 - putative toxin YfjG [I] COG2867 Oligoketide cyclase/lipid transport protein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_982 CH63_983 CH63_983 smpB smpB 1058244 1058726 + SsrA-binding protein smpB: SsrA-binding protein~[O] COG0691 tmRNA-binding protein gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_983 CH63_984 CH63_984 CH63_984 1059361 1059819 + transposase IS200 like family protein [L] COG1943 Transposase and inactivated derivatives gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_984 CH63_985 CH63_985 CH63_985 1060043 1061242 + phage integrase family protein [L] COG0582 Integrase gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_985 CH63_986 CH63_986 CH63_986 1061321 1062409 + hypothetical protein conserved hypothetical protein gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_986 CH63_987 CH63_987 CH63_987 1062460 1064130 + hypothetical protein conserved hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_987 CH63_988 CH63_988 CH63_988 1065327 1066214 + hypothetical protein phage integrase%2C N-terminal SAM-like domain protein~[L] COG0582 Integrase gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_988 CH63_989 CH63_989 CH63_989 1066207 1066407 + prophage CP4-57 regulatory family protein [K] COG3311 Predicted transcriptional regulator gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_989 CH63_99 CH63_99 gap gap 91313 92308 - glyceraldehyde-3-phosphate dehydrogenase%2C type I GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase%2C type I~[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_99 CH63_990 CH63_990 CH63_990 1066407 1066949 + ash family protein gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_990 CH63_991 CH63_991 CH63_991 1066942 1067901 + zinc-binding domain of primase-helicase family protein [S] COG4643 Uncharacterized protein conserved in bacteria gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_991 CH63_992 CH63_992 CH63_992 1067898 1068986 + AAA domain protein [L] COG3598 RecA-family ATPase gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_992 CH63_993 CH63_993 CH63_993 1069237 1069338 - hypothetical protein gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_993 CH63_994 CH63_994 CH63_994 1069335 1069649 - hypothetical protein conserved hypothetical protein~[K] COG3636 Predicted transcriptional regulator gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_994 CH63_995 CH63_995 CH63_995 1069655 1069924 - hypothetical protein conserved hypothetical protein~[S] COG3657 Uncharacterized protein conserved in bacteria gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_995 CH63_996 CH63_996 intA intA 1070387 1070563 + prophage CP4-57 integrase domain protein [L] COG0582 Integrase gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_996 CH63_997 CH63_997 CH63_997 1070577 1071599 + helix-turn-helix family protein [L] COG4584 Transposase and inactivated derivatives gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_997 CH63_998 CH63_998 CH63_998 1071599 1072378 + istB-like ATP binding family protein [L] COG1484 DNA replication protein gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_998 CH63_999 CH63_999 CH63_999 1072429 1072662 - urate catabolism domain protein [G] COG0726 Predicted xylanase/chitin deacetylase gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=CH63_999