YPDSF_0001	SSF48295	TrpR-like
YPDSF_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0002	SSF55979	DNA clamp
YPDSF_0003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0004	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_0004	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_0004	SSF56719	Type II DNA topoisomerase
YPDSF_0005	SSF56784	HAD-like
YPDSF_0006	SSF53098	Ribonuclease H-like
YPDSF_0007	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0008	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_0010	SSF82171	DPP6 N-terminal domain-like
YPDSF_0012	SSF49764	HSP20-like chaperones
YPDSF_0013	SSF49764	HSP20-like chaperones
YPDSF_0014	SSF116726	TrkA C-terminal domain-like
YPDSF_0015	SSF53383	PLP-dependent transferases
YPDSF_0016	SSF51445	(Trans)glycosidases
YPDSF_0017	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0017	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPDSF_0018	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0019	SSF103088	OmpA-like
YPDSF_0020	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_0021	SSF48150	DNA-glycosylase
YPDSF_0022	SSF55681	Class II aaRS and biotin synthetases
YPDSF_0023	SSF109604	HD-domain/PDEase-like
YPDSF_0025	SSF52794	PTS system IIB component-like
YPDSF_0025	SSF55804	Phoshotransferase/anion transport protein
YPDSF_0026	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_0026	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0027	SSF158668	MtlR-like
YPDSF_0031	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_0032	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YPDSF_0032	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YPDSF_0033	SSF53927	Cytidine deaminase-like
YPDSF_0034	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_0035	SSF50692	ADC-like
YPDSF_0035	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_0036	SSF54862	4Fe-4S ferredoxins
YPDSF_0037	SSF81342	Transmembrane di-heme cytochromes
YPDSF_0038	SSF144020	FdhE-like
YPDSF_0039	SSF53383	PLP-dependent transferases
YPDSF_0040	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0040	SSF50447	Translation proteins
YPDSF_0040	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPDSF_0040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0046	SSF103473	MFS general substrate transporter
YPDSF_0047	SSF53098	Ribonuclease H-like
YPDSF_0048	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_0048	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0049	SSF144091	Rhomboid-like
YPDSF_0050	SSF52821	Rhodanese/Cell cycle control phosphatase
YPDSF_0051	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_0051	SSF48452	TPR-like
YPDSF_0051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0052	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_0053	SSF51445	(Trans)glycosidases
YPDSF_0054	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YPDSF_0054	SSF89360	HesB-like domain
YPDSF_0055	SSF53271	PRTase-like
YPDSF_0056	SSF53474	alpha/beta-Hydrolases
YPDSF_0057	SSF159871	YdgH-like
YPDSF_0058	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0059	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0060	SSF50037	C-terminal domain of transcriptional repressors
YPDSF_0061	SSF158832	Tex N-terminal region-like
YPDSF_0061	SSF47781	RuvA domain 2-like
YPDSF_0061	SSF50249	Nucleic acid-binding proteins
YPDSF_0061	SSF53098	Ribonuclease H-like
YPDSF_0062	SSF46557	GreA transcript cleavage protein, N-terminal domain
YPDSF_0062	SSF54534	FKBP-like
YPDSF_0063	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_0063	SSF52172	CheY-like
YPDSF_0064	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_0064	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_0065	SSF53795	PEP carboxykinase-like
YPDSF_0065	SSF68923	PEP carboxykinase N-terminal domain
YPDSF_0066	SSF118352	HSP33 redox switch-like
YPDSF_0066	SSF64397	Hsp33 domain
YPDSF_0067	SSF55174	Alpha-L RNA-binding motif
YPDSF_0068	SSF56784	HAD-like
YPDSF_0070	SSF55811	Nudix
YPDSF_0071	SSF53955	Lysozyme-like
YPDSF_0071	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_0072	SSF53067	Actin-like ATPase domain
YPDSF_0078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0079	SSF56796	Dehydroquinate synthase-like
YPDSF_0080	SSF110997	Sporulation related repeat
YPDSF_0081	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_0082	SSF51366	Ribulose-phoshate binding barrel
YPDSF_0083	SSF56784	HAD-like
YPDSF_0084	SSF52374	Nucleotidylyl transferase
YPDSF_0085	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0085	SSF53790	Tetrapyrrole methylase
YPDSF_0085	SSF75615	Siroheme synthase middle domains-like
YPDSF_0087	SSF50022	ISP domain
YPDSF_0088	SSF51905	FAD/NAD(P)-binding domain
YPDSF_0088	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
YPDSF_0088	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YPDSF_0089	SSF51338	Composite domain of metallo-dependent hydrolases
YPDSF_0089	SSF51556	Metallo-dependent hydrolases
YPDSF_0090	SSF103473	MFS general substrate transporter
YPDSF_0091	SSF56935	Porins
YPDSF_0092	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0092	SSF53822	Periplasmic binding protein-like I
YPDSF_0095	SSF50891	Cyclophilin-like
YPDSF_0096	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0097	SSF52317	Class I glutamine amidotransferase-like
YPDSF_0098	SSF53383	PLP-dependent transferases
YPDSF_0100	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0100	SSF51206	cAMP-binding domain-like
YPDSF_0101	SSF82784	OsmC-like
YPDSF_0103	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0104	SSF118001	YehU-like
YPDSF_0105	SSF53474	alpha/beta-Hydrolases
YPDSF_0107	SSF53850	Periplasmic binding protein-like II
YPDSF_0108	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0109	SSF161098	MetI-like
YPDSF_0110	SSF51197	Clavaminate synthase-like
YPDSF_0113	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_0114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0115	SSF52218	Flavoproteins
YPDSF_0116	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0118	SSF54534	FKBP-like
YPDSF_0120	SSF54534	FKBP-like
YPDSF_0122	SSF75169	DsrEFH-like
YPDSF_0123	SSF75169	DsrEFH-like
YPDSF_0124	SSF75169	DsrEFH-like
YPDSF_0125	SSF50249	Nucleic acid-binding proteins
YPDSF_0126	SSF47973	Ribosomal protein S7
YPDSF_0127	SSF50447	Translation proteins
YPDSF_0127	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0127	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_0127	SSF54980	EF-G C-terminal domain-like
YPDSF_0128	SSF50447	Translation proteins
YPDSF_0128	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPDSF_0128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0129	SSF143422	Transposase IS200-like
YPDSF_0131	SSF47240	Ferritin-like
YPDSF_0132	SSF54999	Ribosomal protein S10
YPDSF_0133	SSF50447	Translation proteins
YPDSF_0134	SSF52166	Ribosomal protein L4
YPDSF_0135	SSF54189	Ribosomal proteins S24e, L23 and L15e
YPDSF_0136	SSF50104	Translation proteins SH3-like domain
YPDSF_0136	SSF50249	Nucleic acid-binding proteins
YPDSF_0137	SSF54570	Ribosomal protein S19
YPDSF_0138	SSF54843	Ribosomal protein L22
YPDSF_0139	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YPDSF_0139	SSF54821	Ribosomal protein S3 C-terminal domain
YPDSF_0140	SSF54686	Ribosomal protein L16p/L10e
YPDSF_0141	SSF46561	Ribosomal protein L29 (L29p)
YPDSF_0142	SSF50249	Nucleic acid-binding proteins
YPDSF_0143	SSF50193	Ribosomal protein L14
YPDSF_0144	SSF50104	Translation proteins SH3-like domain
YPDSF_0145	SSF55282	RL5-like
YPDSF_0146	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPDSF_0147	SSF56047	Ribosomal protein S8
YPDSF_0148	SSF56053	Ribosomal protein L6
YPDSF_0149	SSF53137	Translational machinery components
YPDSF_0150	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_0150	SSF54768	dsRNA-binding domain-like
YPDSF_0151	SSF52080	Ribosomal proteins L15p and L18e
YPDSF_0152	SSF103491	Preprotein translocase SecY subunit
YPDSF_0153	SSF46946	S13-like H2TH domain
YPDSF_0154	SSF53137	Translational machinery components
YPDSF_0155	SSF55174	Alpha-L RNA-binding motif
YPDSF_0156	SSF47789	C-terminal domain of RNA polymerase alpha subunit
YPDSF_0156	SSF55257	RBP11-like subunits of RNA polymerase
YPDSF_0156	SSF56553	Insert subdomain of RNA polymerase alpha subunit
YPDSF_0157	SSF64263	Prokaryotic ribosomal protein L17
YPDSF_0158	SSF46955	Putative DNA-binding domain
YPDSF_0160	SSF81330	Gated mechanosensitive channel
YPDSF_0161	SSF116726	TrkA C-terminal domain-like
YPDSF_0161	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0162	SSF48013	NusB-like
YPDSF_0162	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_0163	SSF50486	FMT C-terminal domain-like
YPDSF_0163	SSF53328	Formyltransferase
YPDSF_0164	SSF56420	Peptide deformylase
YPDSF_0165	SSF102405	MCP/YpsA-like
YPDSF_0167	SSF57783	Zinc beta-ribbon
YPDSF_0168	SSF55821	YrdC/RibB
YPDSF_0169	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0169	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPDSF_0170	SSF51161	Trimeric LpxA-like enzymes
YPDSF_0171	SSF52317	Class I glutamine amidotransferase-like
YPDSF_0173	SSF51645	Malate synthase G
YPDSF_0174	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_0176	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0176	SSF55781	GAF domain-like
YPDSF_0177	SSF47644	Methionine synthase domain
YPDSF_0177	SSF51717	Dihydropteroate synthetase-like
YPDSF_0177	SSF52242	Cobalamin (vitamin B12)-binding domain
YPDSF_0177	SSF56507	Methionine synthase activation domain-like
YPDSF_0177	SSF82282	Homocysteine S-methyltransferase
YPDSF_0181	SSF53633	Carbamate kinase-like
YPDSF_0181	SSF55021	ACT-like
YPDSF_0182	SSF53697	SIS domain
YPDSF_0184	SSF161098	MetI-like
YPDSF_0185	SSF160964	MalF N-terminal region-like
YPDSF_0185	SSF161098	MetI-like
YPDSF_0186	SSF53850	Periplasmic binding protein-like II
YPDSF_0188	SSF50331	MOP-like
YPDSF_0188	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0189	SSF56935	Porins
YPDSF_0192	SSF141452	Hcp1-like
YPDSF_0195	SSF160719	gpW/gp25-like
YPDSF_0197	SSF53098	Ribonuclease H-like
YPDSF_0198	SSF46689	Homeodomain-like
YPDSF_0201	SSF49879	SMAD/FHA domain
YPDSF_0205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0205	SSF81923	Double Clp-N motif
YPDSF_0206	SSF46689	Homeodomain-like
YPDSF_0209	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0212	SSF69255	gp5 N-terminal domain-like
YPDSF_0212	SSF69279	Phage tail proteins
YPDSF_0212	SSF69349	Phage fibre proteins
YPDSF_0213	SSF55724	Mog1p/PsbP-like
YPDSF_0218	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0220	SSF69255	gp5 N-terminal domain-like
YPDSF_0220	SSF69279	Phage tail proteins
YPDSF_0220	SSF69349	Phage fibre proteins
YPDSF_0221	SSF55724	Mog1p/PsbP-like
YPDSF_0224	SSF51658	Xylose isomerase-like
YPDSF_0225	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0225	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_0226	SSF46689	Homeodomain-like
YPDSF_0226	SSF51215	Regulatory protein AraC
YPDSF_0227	SSF102546	RbsD-like
YPDSF_0228	SSF53613	Ribokinase-like
YPDSF_0229	SSF51569	Aldolase
YPDSF_0230	SSF52218	Flavoproteins
YPDSF_0231	SSF53850	Periplasmic binding protein-like II
YPDSF_0232	SSF51679	Bacterial luciferase-like
YPDSF_0233	SSF161098	MetI-like
YPDSF_0234	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0240	SSF53822	Periplasmic binding protein-like I
YPDSF_0241	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0244	SSF53067	Actin-like ATPase domain
YPDSF_0245	SSF53697	SIS domain
YPDSF_0246	SSF47616	GST C-terminal domain-like
YPDSF_0246	SSF52833	Thioredoxin-like
YPDSF_0247	SSF63829	Calcium-dependent phosphotriesterase
YPDSF_0248	SSF46565	Chaperone J-domain
YPDSF_0249	SSF143422	Transposase IS200-like
YPDSF_0250	SSF50249	Nucleic acid-binding proteins
YPDSF_0251	SSF50249	Nucleic acid-binding proteins
YPDSF_0254	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_0255	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_0255	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0256	SSF69118	AhpD-like
YPDSF_0257	SSF103473	MFS general substrate transporter
YPDSF_0258	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0258	SSF48008	GntR ligand-binding domain-like
YPDSF_0259	SSF160631	SMI1/KNR4-like
YPDSF_0260	SSF46689	Homeodomain-like
YPDSF_0261	SSF51395	FMN-linked oxidoreductases
YPDSF_0262	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_0265	SSF51246	Rudiment single hybrid motif
YPDSF_0265	SSF52440	PreATP-grasp domain
YPDSF_0265	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_0266	SSF51230	Single hybrid motif
YPDSF_0267	SSF52304	Type II 3-dehydroquinate dehydratase
YPDSF_0269	SSF56524	Oxidoreductase molybdopterin-binding domain
YPDSF_0270	SSF50129	GroES-like
YPDSF_0270	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0271	SSF141868	EAL domain-like
YPDSF_0271	SSF55073	Nucleotide cyclase
YPDSF_0272	SSF53067	Actin-like ATPase domain
YPDSF_0275	SSF52972	ITPase-like
YPDSF_0276	SSF50249	Nucleic acid-binding proteins
YPDSF_0278	SSF56317	Carbon-nitrogen hydrolase
YPDSF_0279	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YPDSF_0280	SSF52799	(Phosphotyrosine protein) phosphatases II
YPDSF_0281	SSF52799	(Phosphotyrosine protein) phosphatases II
YPDSF_0283	SSF55166	Hedgehog/DD-peptidase
YPDSF_0285	SSF69318	Integrin alpha N-terminal domain
YPDSF_0289	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0290	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0290	SSF53850	Periplasmic binding protein-like II
YPDSF_0292	SSF111369	HlyD-like secretion proteins
YPDSF_0294	SSF53720	ALDH-like
YPDSF_0295	SSF53720	ALDH-like
YPDSF_0296	SSF53933	Microbial ribonucleases
YPDSF_0297	SSF52038	Barstar-related
YPDSF_0298	SSF158710	PSPTO4464-like
YPDSF_0299	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YPDSF_0301	SSF47175	Cytochromes
YPDSF_0302	SSF54534	FKBP-like
YPDSF_0303	SSF51011	Glycosyl hydrolase domain
YPDSF_0303	SSF51445	(Trans)glycosidases
YPDSF_0304	SSF55604	Glucose permease domain IIB
YPDSF_0305	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0305	SSF53822	Periplasmic binding protein-like I
YPDSF_0306	SSF69318	Integrin alpha N-terminal domain
YPDSF_0307	SSF55298	YjgF-like
YPDSF_0308	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
YPDSF_0308	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
YPDSF_0309	SSF53671	Aspartate/ornithine carbamoyltransferase
YPDSF_0310	SSF55594	HPr-like
YPDSF_0311	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0312	SSF55804	Phoshotransferase/anion transport protein
YPDSF_0313	SSF69754	Ribosome binding protein Y (YfiA homologue)
YPDSF_0314	SSF69754	Ribosome binding protein Y (YfiA homologue)
YPDSF_0316	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0319	SSF56784	HAD-like
YPDSF_0320	SSF53697	SIS domain
YPDSF_0322	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0326	SSF52091	SpoIIaa-like
YPDSF_0327	SSF82657	BolA-like
YPDSF_0328	SSF55205	EPT/RTPC-like
YPDSF_0329	SSF50156	PDZ domain-like
YPDSF_0329	SSF50494	Trypsin-like serine proteases
YPDSF_0330	SSF143422	Transposase IS200-like
YPDSF_0331	SSF50156	PDZ domain-like
YPDSF_0331	SSF50494	Trypsin-like serine proteases
YPDSF_0333	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0334	SSF52161	Ribosomal protein L13
YPDSF_0335	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_0336	SSF47616	GST C-terminal domain-like
YPDSF_0336	SSF52833	Thioredoxin-like
YPDSF_0337	SSF101738	SspB-like
YPDSF_0339	SSF46548	alpha-helical ferredoxin
YPDSF_0339	SSF51971	Nucleotide-binding domain
YPDSF_0340	SSF51395	FMN-linked oxidoreductases
YPDSF_0340	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_0340	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
YPDSF_0341	SSF102114	Radical SAM enzymes
YPDSF_0342	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPDSF_0342	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_0342	SSF52172	CheY-like
YPDSF_0342	SSF55785	PYP-like sensor domain (PAS domain)
YPDSF_0342	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_0345	SSF53955	Lysozyme-like
YPDSF_0347	SSF53697	SIS domain
YPDSF_0348	SSF52980	Restriction endonuclease-like
YPDSF_0349	SSF53822	Periplasmic binding protein-like I
YPDSF_0350	SSF53790	Tetrapyrrole methylase
YPDSF_0351	SSF51182	RmlC-like cupins
YPDSF_0352	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0352	SSF53850	Periplasmic binding protein-like II
YPDSF_0353	SSF47616	GST C-terminal domain-like
YPDSF_0353	SSF52833	Thioredoxin-like
YPDSF_0363	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0363	SSF48008	GntR ligand-binding domain-like
YPDSF_0366	SSF51556	Metallo-dependent hydrolases
YPDSF_0367	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_0367	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0370	SSF143422	Transposase IS200-like
YPDSF_0371	SSF118215	Proton glutamate symport protein
YPDSF_0372	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0372	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_0374	SSF103515	Autotransporter
YPDSF_0374	SSF51126	Pectin lyase-like
YPDSF_0375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_0376	SSF51395	FMN-linked oxidoreductases
YPDSF_0376	SSF51905	FAD/NAD(P)-binding domain
YPDSF_0376	SSF51971	Nucleotide-binding domain
YPDSF_0378	SSF56112	Protein kinase-like (PK-like)
YPDSF_0379	SSF81606	PP2C-like
YPDSF_0381	SSF53300	vWA-like
YPDSF_0382	SSF53300	vWA-like
YPDSF_0384	SSF53300	vWA-like
YPDSF_0386	SSF51126	Pectin lyase-like
YPDSF_0391	SSF103515	Autotransporter
YPDSF_0394	SSF50331	MOP-like
YPDSF_0394	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0395	SSF48208	Six-hairpin glycosidases
YPDSF_0396	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0396	SSF53822	Periplasmic binding protein-like I
YPDSF_0397	SSF53850	Periplasmic binding protein-like II
YPDSF_0398	SSF161098	MetI-like
YPDSF_0399	SSF161098	MetI-like
YPDSF_0401	SSF51445	(Trans)glycosidases
YPDSF_0401	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
YPDSF_0402	SSF56954	Outer membrane efflux proteins (OEP)
YPDSF_0404	SSF111369	HlyD-like secretion proteins
YPDSF_0407	SSF53383	PLP-dependent transferases
YPDSF_0410	SSF55961	Bet v1-like
YPDSF_0412	SSF55298	YjgF-like
YPDSF_0413	SSF55298	YjgF-like
YPDSF_0414	SSF54909	Dimeric alpha+beta barrel
YPDSF_0415	SSF52833	Thioredoxin-like
YPDSF_0416	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0416	SSF53850	Periplasmic binding protein-like II
YPDSF_0417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0418	SSF46689	Homeodomain-like
YPDSF_0418	SSF53098	Ribonuclease H-like
YPDSF_0420	SSF140931	Fic-like
YPDSF_0422	SSF54060	His-Me finger endonucleases
YPDSF_0423	SSF160631	SMI1/KNR4-like
YPDSF_0424	SSF160631	SMI1/KNR4-like
YPDSF_0427	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPDSF_0427	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPDSF_0428	SSF117023	DNA primase DnaG, C-terminal domain
YPDSF_0428	SSF56731	DNA primase core
YPDSF_0428	SSF57783	Zinc beta-ribbon
YPDSF_0430	SSF53067	Actin-like ATPase domain
YPDSF_0432	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPDSF_0434	SSF81301	Nucleotidyltransferase
YPDSF_0434	SSF81891	Poly A polymerase C-terminal region-like
YPDSF_0436	SSF55154	CYTH-like phosphatases
YPDSF_0437	SSF81301	Nucleotidyltransferase
YPDSF_0437	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
YPDSF_0438	SSF52374	Nucleotidylyl transferase
YPDSF_0438	SSF53613	Ribokinase-like
YPDSF_0441	SSF55821	YrdC/RibB
YPDSF_0442	SSF53213	LigB-like
YPDSF_0443	SSF52440	PreATP-grasp domain
YPDSF_0443	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_0445	SSF56954	Outer membrane efflux proteins (OEP)
YPDSF_0446	SSF55811	Nudix
YPDSF_0448	SSF56300	Metallo-dependent phosphatases
YPDSF_0449	SSF53474	alpha/beta-Hydrolases
YPDSF_0450	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_0450	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_0450	SSF56719	Type II DNA topoisomerase
YPDSF_0451	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0451	SSF53850	Periplasmic binding protein-like II
YPDSF_0452	SSF52218	Flavoproteins
YPDSF_0454	SSF101904	GyrA/ParC C-terminal domain-like
YPDSF_0454	SSF56719	Type II DNA topoisomerase
YPDSF_0455	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPDSF_0457	SSF49503	Cupredoxins
YPDSF_0458	SSF102114	Radical SAM enzymes
YPDSF_0460	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_0462	SSF56796	Dehydroquinate synthase-like
YPDSF_0463	SSF46689	Homeodomain-like
YPDSF_0465	SSF53383	PLP-dependent transferases
YPDSF_0468	SSF53300	vWA-like
YPDSF_0471	SSF48452	TPR-like
YPDSF_0474	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0480	SSF143422	Transposase IS200-like
YPDSF_0481	SSF141729	FimD N-terminal domain-like
YPDSF_0482	SSF49354	PapD-like
YPDSF_0482	SSF49584	Periplasmic chaperone C-domain
YPDSF_0485	SSF53807	"Helical backbone" metal receptor
YPDSF_0490	SSF160544	EscU C-terminal domain-like
YPDSF_0494	SSF101801	Surface presentation of antigens (SPOA)
YPDSF_0495	SSF101801	Surface presentation of antigens (SPOA)
YPDSF_0496	SSF46689	Homeodomain-like
YPDSF_0496	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0499	SSF48029	FliG
YPDSF_0501	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0503	SSF140566	FlgN-like
YPDSF_0504	SSF101498	Anti-sigma factor FlgM
YPDSF_0509	SSF117143	Flagellar hook protein flgE
YPDSF_0510	SSF117143	Flagellar hook protein flgE
YPDSF_0511	SSF117143	Flagellar hook protein flgE
YPDSF_0515	SSF64518	Phase 1 flagellin
YPDSF_0516	SSF64518	Phase 1 flagellin
YPDSF_0519	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_0520	SSF64518	Phase 1 flagellin
YPDSF_0521	SSF64518	Phase 1 flagellin
YPDSF_0522	SSF53098	Ribonuclease H-like
YPDSF_0523	SSF103473	MFS general substrate transporter
YPDSF_0524	SSF56935	Porins
YPDSF_0525	SSF51905	FAD/NAD(P)-binding domain
YPDSF_0527	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_0530	SSF103473	MFS general substrate transporter
YPDSF_0531	SSF49482	Aromatic compound dioxygenase
YPDSF_0532	SSF53474	alpha/beta-Hydrolases
YPDSF_0533	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_0533	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
YPDSF_0534	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_0542	SSF103088	OmpA-like
YPDSF_0544	SSF141452	Hcp1-like
YPDSF_0545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0545	SSF81923	Double Clp-N motif
YPDSF_0546	SSF69255	gp5 N-terminal domain-like
YPDSF_0546	SSF69279	Phage tail proteins
YPDSF_0547	SSF51261	Duplicated hybrid motif
YPDSF_0547	SSF53955	Lysozyme-like
YPDSF_0554	SSF52172	CheY-like
YPDSF_0554	SSF53383	PLP-dependent transferases
YPDSF_0554	SSF55904	Ornithine decarboxylase C-terminal domain
YPDSF_0555	SSF53822	Periplasmic binding protein-like I
YPDSF_0556	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0558	SSF56935	Porins
YPDSF_0559	SSF53807	"Helical backbone" metal receptor
YPDSF_0560	SSF53955	Lysozyme-like
YPDSF_0561	SSF111148	YggX-like
YPDSF_0562	SSF48150	DNA-glycosylase
YPDSF_0562	SSF55811	Nudix
YPDSF_0563	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_0565	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_0568	SSF51120	beta-Roll
YPDSF_0568	SSF69318	Integrin alpha N-terminal domain
YPDSF_0569	SSF102114	Radical SAM enzymes
YPDSF_0570	SSF52972	ITPase-like
YPDSF_0571	SSF69786	YggU-like
YPDSF_0573	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_0573	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0574	SSF51419	PLP-binding barrel
YPDSF_0575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0576	SSF55909	Pentein
YPDSF_0577	SSF56317	Carbon-nitrogen hydrolase
YPDSF_0578	SSF53098	Ribonuclease H-like
YPDSF_0579	SSF143456	VC0467-like
YPDSF_0580	SSF52440	PreATP-grasp domain
YPDSF_0580	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_0581	SSF75217	alpha/beta knot
YPDSF_0581	SSF88697	PUA domain-like
YPDSF_0583	SSF54060	His-Me finger endonucleases
YPDSF_0585	SSF55973	S-adenosylmethionine synthetase
YPDSF_0586	SSF50621	Alanine racemase C-terminal domain-like
YPDSF_0586	SSF51419	PLP-binding barrel
YPDSF_0587	SSF50022	ISP domain
YPDSF_0589	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_0589	SSF52922	TK C-terminal domain-like
YPDSF_0590	SSF143422	Transposase IS200-like
YPDSF_0591	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0591	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_0592	SSF53748	Phosphoglycerate kinase
YPDSF_0593	SSF51569	Aldolase
YPDSF_0594	SSF50182	Sm-like ribonucleoproteins
YPDSF_0594	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YPDSF_0594	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YPDSF_0597	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0597	SSF53850	Periplasmic binding protein-like II
YPDSF_0598	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_0598	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
YPDSF_0599	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0599	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPDSF_0599	SSF55021	ACT-like
YPDSF_0600	SSF143422	Transposase IS200-like
YPDSF_0601	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_0602	SSF102829	Cell division protein ZapA-like
YPDSF_0603	SSF101327	YgfB-like
YPDSF_0604	SSF53092	Creatinase/prolidase N-terminal domain
YPDSF_0604	SSF55920	Creatinase/aminopeptidase
YPDSF_0605	SSF51905	FAD/NAD(P)-binding domain
YPDSF_0606	SSF51905	FAD/NAD(P)-binding domain
YPDSF_0607	SSF101790	Aminomethyltransferase beta-barrel domain
YPDSF_0607	SSF103025	Folate-binding domain
YPDSF_0608	SSF51230	Single hybrid motif
YPDSF_0609	SSF53383	PLP-dependent transferases
YPDSF_0617	SSF101790	Aminomethyltransferase beta-barrel domain
YPDSF_0617	SSF103025	Folate-binding domain
YPDSF_0618	SSF109910	YgfY-like
YPDSF_0620	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_0620	SSF52172	CheY-like
YPDSF_0621	SSF103190	Sensory domain-like
YPDSF_0621	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_0621	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_0623	SSF52218	Flavoproteins
YPDSF_0624	SSF47823	lambda integrase-like, N-terminal domain
YPDSF_0624	SSF56349	DNA breaking-rejoining enzymes
YPDSF_0625	SSF52833	Thioredoxin-like
YPDSF_0625	SSF54423	DsbC/DsbG N-terminal domain-like
YPDSF_0626	SSF64182	DHH phosphoesterases
YPDSF_0627	SSF75620	Release factor
YPDSF_0628	SSF50249	Nucleic acid-binding proteins
YPDSF_0628	SSF55681	Class II aaRS and biotin synthetases
YPDSF_0629	SSF56349	DNA breaking-rejoining enzymes
YPDSF_0632	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0634	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0635	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0635	SSF57783	Zinc beta-ribbon
YPDSF_0637	SSF46955	Putative DNA-binding domain
YPDSF_0641	SSF140931	Fic-like
YPDSF_0642	SSF69369	Cloacin translocation domain
YPDSF_0649	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0650	SSF54001	Cysteine proteinases
YPDSF_0652	SSF53822	Periplasmic binding protein-like I
YPDSF_0654	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0655	SSF50331	MOP-like
YPDSF_0655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0656	SSF53850	Periplasmic binding protein-like II
YPDSF_0658	SSF160964	MalF N-terminal region-like
YPDSF_0658	SSF161098	MetI-like
YPDSF_0659	SSF161098	MetI-like
YPDSF_0660	SSF51445	(Trans)glycosidases
YPDSF_0664	SSF56935	Porins
YPDSF_0665	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0665	SSF53822	Periplasmic binding protein-like I
YPDSF_0666	SSF51011	Glycosyl hydrolase domain
YPDSF_0666	SSF51445	(Trans)glycosidases
YPDSF_0666	SSF74650	Galactose mutarotase-like
YPDSF_0667	SSF103473	MFS general substrate transporter
YPDSF_0668	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0668	SSF53822	Periplasmic binding protein-like I
YPDSF_0669	SSF52317	Class I glutamine amidotransferase-like
YPDSF_0670	SSF51569	Aldolase
YPDSF_0672	SSF53649	Alkaline phosphatase-like
YPDSF_0673	SSF102114	Radical SAM enzymes
YPDSF_0674	SSF48208	Six-hairpin glycosidases
YPDSF_0675	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0676	SSF51338	Composite domain of metallo-dependent hydrolases
YPDSF_0676	SSF51556	Metallo-dependent hydrolases
YPDSF_0677	SSF53062	PTS system fructose IIA component-like
YPDSF_0680	SSF52728	PTS IIb component
YPDSF_0681	SSF53697	SIS domain
YPDSF_0682	SSF51569	Aldolase
YPDSF_0683	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_0683	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0684	SSF53649	Alkaline phosphatase-like
YPDSF_0685	SSF143422	Transposase IS200-like
YPDSF_0686	SSF46689	Homeodomain-like
YPDSF_0686	SSF53098	Ribonuclease H-like
YPDSF_0687	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0688	SSF48230	Chondroitin AC/alginate lyase
YPDSF_0688	SSF49785	Galactose-binding domain-like
YPDSF_0688	SSF49863	Hyaluronate lyase-like, C-terminal domain
YPDSF_0688	SSF74650	Galactose mutarotase-like
YPDSF_0689	SSF103515	Autotransporter
YPDSF_0692	SSF53056	beta-carbonic anhydrase, cab
YPDSF_0695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0697	SSF54523	Pili subunits
YPDSF_0699	SSF54523	Pili subunits
YPDSF_0700	SSF158544	GspK insert domain-like
YPDSF_0701	SSF53067	Actin-like ATPase domain
YPDSF_0706	SSF56784	HAD-like
YPDSF_0708	SSF56112	Protein kinase-like (PK-like)
YPDSF_0710	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_0711	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_0712	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0713	SSF53807	"Helical backbone" metal receptor
YPDSF_0714	SSF53955	Lysozyme-like
YPDSF_0717	SSF52954	Class II aaRS ABD-related
YPDSF_0717	SSF55186	ThrRS/AlaRS common domain
YPDSF_0717	SSF55681	Class II aaRS and biotin synthetases
YPDSF_0717	SSF81271	TGS-like
YPDSF_0718	SSF55200	Translation initiation factor IF3, C-terminal domain
YPDSF_0719	SSF143034	L35p-like
YPDSF_0720	SSF74731	Ribosomal protein L20
YPDSF_0721	SSF46589	tRNA-binding arm
YPDSF_0721	SSF55681	Class II aaRS and biotin synthetases
YPDSF_0722	SSF46955	Putative DNA-binding domain
YPDSF_0722	SSF50249	Nucleic acid-binding proteins
YPDSF_0722	SSF54991	Anticodon-binding domain of PheRS
YPDSF_0722	SSF55681	Class II aaRS and biotin synthetases
YPDSF_0722	SSF56037	PheT/TilS domain
YPDSF_0723	SSF47729	IHF-like DNA-binding proteins
YPDSF_0725	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_0726	SSF52833	Thioredoxin-like
YPDSF_0727	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0728	SSF53383	PLP-dependent transferases
YPDSF_0729	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_0730	SSF50486	FMT C-terminal domain-like
YPDSF_0730	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0730	SSF53328	Formyltransferase
YPDSF_0731	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_0733	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_0734	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_0735	SSF54001	Cysteine proteinases
YPDSF_0736	SSF55681	Class II aaRS and biotin synthetases
YPDSF_0736	SSF82649	SufE/NifU
YPDSF_0738	SSF51569	Aldolase
YPDSF_0739	SSF47454	A DNA-binding domain in eukaryotic transcription factors
YPDSF_0740	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_0740	SSF52009	Phosphohistidine domain
YPDSF_0740	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_0742	SSF46548	alpha-helical ferredoxin
YPDSF_0742	SSF55103	FAD-linked oxidases, C-terminal domain
YPDSF_0742	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_0743	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_0744	SSF89360	HesB-like domain
YPDSF_0745	SSF101960	Stabilizer of iron transporter SufD
YPDSF_0746	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0747	SSF101960	Stabilizer of iron transporter SufD
YPDSF_0748	SSF53383	PLP-dependent transferases
YPDSF_0749	SSF82649	SufE/NifU
YPDSF_0750	SSF141523	L,D-transpeptidase catalytic domain-like
YPDSF_0751	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0752	SSF46689	Homeodomain-like
YPDSF_0752	SSF53098	Ribonuclease H-like
YPDSF_0753	SSF143422	Transposase IS200-like
YPDSF_0754	SSF50800	PK beta-barrel domain-like
YPDSF_0754	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_0754	SSF52935	PK C-terminal domain-like
YPDSF_0756	SSF63380	Riboflavin synthase domain-like
YPDSF_0757	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_0758	SSF103473	MFS general substrate transporter
YPDSF_0759	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0759	SSF53850	Periplasmic binding protein-like II
YPDSF_0760	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0760	SSF53822	Periplasmic binding protein-like I
YPDSF_0761	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YPDSF_0761	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YPDSF_0762	SSF54001	Cysteine proteinases
YPDSF_0763	SSF52833	Thioredoxin-like
YPDSF_0764	SSF53098	Ribonuclease H-like
YPDSF_0765	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YPDSF_0767	SSF51395	FMN-linked oxidoreductases
YPDSF_0768	SSF46689	Homeodomain-like
YPDSF_0768	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPDSF_0769	SSF53649	Alkaline phosphatase-like
YPDSF_0771	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_0772	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0774	SSF53067	Actin-like ATPase domain
YPDSF_0775	SSF141488	YdhA-like
YPDSF_0776	SSF50475	FMN-binding split barrel
YPDSF_0777	SSF52374	Nucleotidylyl transferase
YPDSF_0777	SSF55174	Alpha-L RNA-binding motif
YPDSF_0778	SSF53613	Ribokinase-like
YPDSF_0779	SSF47616	GST C-terminal domain-like
YPDSF_0779	SSF52833	Thioredoxin-like
YPDSF_0782	SSF103473	MFS general substrate transporter
YPDSF_0783	SSF69118	AhpD-like
YPDSF_0784	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0786	SSF161098	MetI-like
YPDSF_0787	SSF161098	MetI-like
YPDSF_0788	SSF53850	Periplasmic binding protein-like II
YPDSF_0789	SSF143422	Transposase IS200-like
YPDSF_0790	SSF46689	Homeodomain-like
YPDSF_0790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0799	SSF46689	Homeodomain-like
YPDSF_0799	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0799	SSF55785	PYP-like sensor domain (PAS domain)
YPDSF_0800	SSF143422	Transposase IS200-like
YPDSF_0801	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0802	SSF46689	Homeodomain-like
YPDSF_0802	SSF53098	Ribonuclease H-like
YPDSF_0803	SSF52833	Thioredoxin-like
YPDSF_0804	SSF51604	Enolase C-terminal domain-like
YPDSF_0804	SSF54826	Enolase N-terminal domain-like
YPDSF_0805	SSF53187	Zn-dependent exopeptidases
YPDSF_0806	SSF53850	Periplasmic binding protein-like II
YPDSF_0807	SSF143865	CorA soluble domain-like
YPDSF_0807	SSF144083	Magnesium transport protein CorA, transmembrane region
YPDSF_0809	SSF46955	Putative DNA-binding domain
YPDSF_0810	SSF53474	alpha/beta-Hydrolases
YPDSF_0811	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_0812	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_0812	SSF52922	TK C-terminal domain-like
YPDSF_0812	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
YPDSF_0812	SSF54862	4Fe-4S ferredoxins
YPDSF_0813	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_0817	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0817	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPDSF_0821	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_0821	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0822	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_0823	SSF52218	Flavoproteins
YPDSF_0824	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0825	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0826	SSF50494	Trypsin-like serine proteases
YPDSF_0828	SSF81342	Transmembrane di-heme cytochromes
YPDSF_0829	SSF101874	YceI-like
YPDSF_0831	SSF81298	Adenylylcyclase toxin (the edema factor)
YPDSF_0832	SSF81298	Adenylylcyclase toxin (the edema factor)
YPDSF_0833	SSF143422	Transposase IS200-like
YPDSF_0834	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPDSF_0835	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_0835	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_0836	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_0836	SSF52172	CheY-like
YPDSF_0839	SSF159871	YdgH-like
YPDSF_0840	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0840	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPDSF_0841	SSF52467	DHS-like NAD/FAD-binding domain
YPDSF_0842	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_0843	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0843	SSF51206	cAMP-binding domain-like
YPDSF_0844	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YPDSF_0844	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
YPDSF_0845	SSF53649	Alkaline phosphatase-like
YPDSF_0846	SSF158682	TerB-like
YPDSF_0847	SSF56784	HAD-like
YPDSF_0848	SSF55021	ACT-like
YPDSF_0849	SSF52467	DHS-like NAD/FAD-binding domain
YPDSF_0849	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_0850	SSF54001	Cysteine proteinases
YPDSF_0855	SSF53167	Purine and uridine phosphorylases
YPDSF_0856	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0857	SSF161098	MetI-like
YPDSF_0858	SSF53850	Periplasmic binding protein-like II
YPDSF_0861	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_0861	SSF53822	Periplasmic binding protein-like I
YPDSF_0863	SSF81340	Clc chloride channel
YPDSF_0864	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0865	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0865	SSF53067	Actin-like ATPase domain
YPDSF_0866	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0866	SSF53850	Periplasmic binding protein-like II
YPDSF_0867	SSF103473	MFS general substrate transporter
YPDSF_0868	SSF56596	Replication terminator protein (Tus)
YPDSF_0869	SSF48557	L-aspartase-like
YPDSF_0870	SSF51182	RmlC-like cupins
YPDSF_0874	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0875	SSF46689	Homeodomain-like
YPDSF_0875	SSF51215	Regulatory protein AraC
YPDSF_0878	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0879	SSF53822	Periplasmic binding protein-like I
YPDSF_0880	SSF53067	Actin-like ATPase domain
YPDSF_0881	SSF50443	FucI/AraA C-terminal domain-like
YPDSF_0881	SSF53743	FucI/AraA N-terminal and middle domains
YPDSF_0882	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0882	SSF90123	ABC transporter transmembrane region
YPDSF_0884	SSF111369	HlyD-like secretion proteins
YPDSF_0885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0886	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0886	SSF90123	ABC transporter transmembrane region
YPDSF_0890	SSF54862	4Fe-4S ferredoxins
YPDSF_0891	SSF142019	Nqo1 FMN-binding domain-like
YPDSF_0891	SSF46548	alpha-helical ferredoxin
YPDSF_0892	SSF46689	Homeodomain-like
YPDSF_0892	SSF55136	Probable bacterial effector-binding domain
YPDSF_0896	SSF48150	DNA-glycosylase
YPDSF_0897	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0898	SSF103473	MFS general substrate transporter
YPDSF_0899	SSF50249	Nucleic acid-binding proteins
YPDSF_0902	SSF51569	Aldolase
YPDSF_0904	SSF53639	AraD/HMP-PK domain-like
YPDSF_0906	SSF55159	eIF1-like
YPDSF_0907	SSF51366	Ribulose-phoshate binding barrel
YPDSF_0908	SSF47598	Ribbon-helix-helix
YPDSF_0909	SSF48452	TPR-like
YPDSF_0911	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPDSF_0912	SSF142695	RibA-like
YPDSF_0913	SSF52016	LeuD/IlvD-like
YPDSF_0913	SSF53732	Aconitase iron-sulfur domain
YPDSF_0915	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0915	SSF53850	Periplasmic binding protein-like II
YPDSF_0916	SSF143422	Transposase IS200-like
YPDSF_0917	SSF56712	Prokaryotic type I DNA topoisomerase
YPDSF_0917	SSF57783	Zinc beta-ribbon
YPDSF_0919	SSF52096	ClpP/crotonase
YPDSF_0920	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0921	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0922	SSF55120	Pseudouridine synthase
YPDSF_0922	SSF55174	Alpha-L RNA-binding motif
YPDSF_0923	SSF55821	YrdC/RibB
YPDSF_0924	SSF89550	PHP domain-like
YPDSF_0925	SSF56322	ADC synthase
YPDSF_0926	SSF52317	Class I glutamine amidotransferase-like
YPDSF_0927	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YPDSF_0927	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YPDSF_0928	SSF51366	Ribulose-phoshate binding barrel
YPDSF_0929	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_0930	SSF51366	Ribulose-phoshate binding barrel
YPDSF_0933	SSF56925	OMPA-like
YPDSF_0936	SSF52091	SpoIIaa-like
YPDSF_0939	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_0941	SSF74653	TolA/TonB C-terminal domain
YPDSF_0942	SSF54909	Dimeric alpha+beta barrel
YPDSF_0946	SSF56925	OMPA-like
YPDSF_0947	SSF56024	Phospholipase D/nuclease
YPDSF_0948	SSF102816	Putative dsDNA mimic
YPDSF_0950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0951	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0952	SSF161098	MetI-like
YPDSF_0953	SSF161098	MetI-like
YPDSF_0954	SSF53850	Periplasmic binding protein-like II
YPDSF_0956	SSF53720	ALDH-like
YPDSF_0956	SSF56796	Dehydroquinate synthase-like
YPDSF_0957	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0957	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPDSF_0958	SSF81273	H-NS histone-like proteins
YPDSF_0960	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_0960	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0960	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
YPDSF_0961	SSF52172	CheY-like
YPDSF_0962	SSF103642	Sec-C motif
YPDSF_0962	SSF54427	NTF2-like
YPDSF_0963	SSF53328	Formyltransferase
YPDSF_0963	SSF55021	ACT-like
YPDSF_0965	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0966	SSF56219	DNase I-like
YPDSF_0967	SSF55811	Nudix
YPDSF_0969	SSF56712	Prokaryotic type I DNA topoisomerase
YPDSF_0970	SSF55326	PurM N-terminal domain-like
YPDSF_0970	SSF56042	PurM C-terminal domain-like
YPDSF_0971	SSF55469	FMN-dependent nitroreductase-like
YPDSF_0972	SSF52096	ClpP/crotonase
YPDSF_0973	SSF53774	Glutaminase/Asparaginase
YPDSF_0974	SSF52499	Isochorismatase-like hydrolases
YPDSF_0976	SSF51316	Mss4-like
YPDSF_0977	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_0977	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_0978	SSF74650	Galactose mutarotase-like
YPDSF_0980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_0982	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_0983	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0983	SSF53850	Periplasmic binding protein-like II
YPDSF_0984	SSF51182	RmlC-like cupins
YPDSF_0985	SSF103473	MFS general substrate transporter
YPDSF_0986	SSF51905	FAD/NAD(P)-binding domain
YPDSF_0986	SSF54373	FAD-linked reductases, C-terminal domain
YPDSF_0988	SSF46785	"Winged helix" DNA-binding domain
YPDSF_0988	SSF48008	GntR ligand-binding domain-like
YPDSF_0990	SSF158442	DsbB-like
YPDSF_0993	SSF53383	PLP-dependent transferases
YPDSF_0994	SSF103473	MFS general substrate transporter
YPDSF_1000	SSF49265	Fibronectin type III
YPDSF_1004	SSF47598	Ribbon-helix-helix
YPDSF_1006	SSF102712	JAB1/MPN domain
YPDSF_1006	SSF54001	Cysteine proteinases
YPDSF_1008	SSF143422	Transposase IS200-like
YPDSF_1009	SSF143422	Transposase IS200-like
YPDSF_1013	SSF49373	Invasin/intimin cell-adhesion fragments
YPDSF_1019	SSF49373	Invasin/intimin cell-adhesion fragments
YPDSF_1029	SSF53955	Lysozyme-like
YPDSF_1034	SSF103370	NinB
YPDSF_1035	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1037	SSF46689	Homeodomain-like
YPDSF_1037	SSF53098	Ribonuclease H-like
YPDSF_1038	SSF56349	DNA breaking-rejoining enzymes
YPDSF_1040	SSF56529	FAH
YPDSF_1041	SSF53955	Lysozyme-like
YPDSF_1042	SSF160191	YcgL-like
YPDSF_1043	SSF63848	Cell-division inhibitor MinC, C-terminal domain
YPDSF_1044	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1045	SSF55229	Cell division protein MinE topological specificity domain
YPDSF_1046	SSF47819	HRDC-like
YPDSF_1046	SSF53098	Ribonuclease H-like
YPDSF_1047	SSF56801	Acetyl-CoA synthetase-like
YPDSF_1050	SSF53067	Actin-like ATPase domain
YPDSF_1051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1052	SSF55298	YjgF-like
YPDSF_1053	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_1054	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_1055	SSF51569	Aldolase
YPDSF_1056	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1056	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_1057	SSF46689	Homeodomain-like
YPDSF_1057	SSF53697	SIS domain
YPDSF_1058	SSF50800	PK beta-barrel domain-like
YPDSF_1058	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_1058	SSF52935	PK C-terminal domain-like
YPDSF_1060	SSF51261	Duplicated hybrid motif
YPDSF_1061	SSF53807	"Helical backbone" metal receptor
YPDSF_1062	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1063	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_1064	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1064	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1065	SSF46929	DNA helicase RuvA subunit, C-terminal domain
YPDSF_1065	SSF47781	RuvA domain 2-like
YPDSF_1065	SSF50249	Nucleic acid-binding proteins
YPDSF_1066	SSF53098	Ribonuclease H-like
YPDSF_1067	SSF75625	YebC-like
YPDSF_1068	SSF55811	Nudix
YPDSF_1069	SSF50249	Nucleic acid-binding proteins
YPDSF_1069	SSF55261	GAD domain-like
YPDSF_1069	SSF55681	Class II aaRS and biotin synthetases
YPDSF_1070	SSF117396	TM1631-like
YPDSF_1071	SSF161084	MAPEG domain-like
YPDSF_1072	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1073	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1074	SSF110395	CutC-like
YPDSF_1075	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YPDSF_1077	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPDSF_1077	SSF52374	Nucleotidylyl transferase
YPDSF_1077	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
YPDSF_1078	SSF51126	Pectin lyase-like
YPDSF_1081	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1081	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1081	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_1082	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1083	SSF103473	MFS general substrate transporter
YPDSF_1085	SSF89155	TorD-like
YPDSF_1086	SSF89550	PHP domain-like
YPDSF_1087	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1087	SSF53067	Actin-like ATPase domain
YPDSF_1088	SSF51695	PLC-like phosphodiesterases
YPDSF_1089	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1090	SSF143422	Transposase IS200-like
YPDSF_1091	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1092	SSF161098	MetI-like
YPDSF_1093	SSF161098	MetI-like
YPDSF_1094	SSF53850	Periplasmic binding protein-like II
YPDSF_1095	SSF51695	PLC-like phosphodiesterases
YPDSF_1096	SSF52091	SpoIIaa-like
YPDSF_1097	SSF51569	Aldolase
YPDSF_1098	SSF48452	TPR-like
YPDSF_1100	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1101	SSF75620	Release factor
YPDSF_1102	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1102	SSF69075	Glutamyl tRNA-reductase dimerization domain
YPDSF_1102	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
YPDSF_1103	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
YPDSF_1104	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_1104	SSF55060	GHMP Kinase, C-terminal domain
YPDSF_1106	SSF53271	PRTase-like
YPDSF_1108	SSF53178	Peptidyl-tRNA hydrolase-like
YPDSF_1109	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1109	SSF81271	TGS-like
YPDSF_1110	SSF48295	TrpR-like
YPDSF_1111	SSF53098	Ribonuclease H-like
YPDSF_1112	SSF52821	Rhodanese/Cell cycle control phosphatase
YPDSF_1113	SSF53474	alpha/beta-Hydrolases
YPDSF_1114	SSF53822	Periplasmic binding protein-like I
YPDSF_1116	SSF81342	Transmembrane di-heme cytochromes
YPDSF_1117	SSF52218	Flavoproteins
YPDSF_1118	SSF53474	alpha/beta-Hydrolases
YPDSF_1119	SSF52172	CheY-like
YPDSF_1120	SSF46689	Homeodomain-like
YPDSF_1120	SSF53098	Ribonuclease H-like
YPDSF_1121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1122	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_1122	SSF52172	CheY-like
YPDSF_1123	SSF158472	HAMP domain-like
YPDSF_1123	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_1123	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_1124	SSF69118	AhpD-like
YPDSF_1125	SSF51182	RmlC-like cupins
YPDSF_1126	SSF53474	alpha/beta-Hydrolases
YPDSF_1127	SSF48371	ARM repeat
YPDSF_1128	SSF51182	RmlC-like cupins
YPDSF_1129	SSF51182	RmlC-like cupins
YPDSF_1130	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1131	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1132	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YPDSF_1133	SSF81901	HCP-like
YPDSF_1134	SSF81901	HCP-like
YPDSF_1134	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
YPDSF_1138	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_1140	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_1141	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1143	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_1144	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1145	SSF53901	Thiolase-like
YPDSF_1146	SSF53901	Thiolase-like
YPDSF_1147	SSF56322	ADC synthase
YPDSF_1148	SSF51182	RmlC-like cupins
YPDSF_1149	SSF51338	Composite domain of metallo-dependent hydrolases
YPDSF_1149	SSF51556	Metallo-dependent hydrolases
YPDSF_1150	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1150	SSF64288	Chorismate lyase-like
YPDSF_1151	SSF51338	Composite domain of metallo-dependent hydrolases
YPDSF_1151	SSF51556	Metallo-dependent hydrolases
YPDSF_1152	SSF46689	Homeodomain-like
YPDSF_1152	SSF53098	Ribonuclease H-like
YPDSF_1153	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1154	SSF53187	Zn-dependent exopeptidases
YPDSF_1156	SSF56935	Porins
YPDSF_1157	SSF53187	Zn-dependent exopeptidases
YPDSF_1158	SSF55909	Pentein
YPDSF_1159	SSF53720	ALDH-like
YPDSF_1160	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1161	SSF53383	PLP-dependent transferases
YPDSF_1162	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1162	SSF53383	PLP-dependent transferases
YPDSF_1163	SSF158472	HAMP domain-like
YPDSF_1163	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_1165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1167	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1169	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_1170	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_1171	SSF48452	TPR-like
YPDSF_1172	SSF53092	Creatinase/prolidase N-terminal domain
YPDSF_1172	SSF55920	Creatinase/aminopeptidase
YPDSF_1173	SSF51197	Clavaminate synthase-like
YPDSF_1173	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1174	SSF46626	Cytochrome c
YPDSF_1175	SSF52833	Thioredoxin-like
YPDSF_1176	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1183	SSF103473	MFS general substrate transporter
YPDSF_1184	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_1186	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_1186	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1188	SSF53383	PLP-dependent transferases
YPDSF_1190	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1190	SSF53850	Periplasmic binding protein-like II
YPDSF_1191	SSF51556	Metallo-dependent hydrolases
YPDSF_1192	SSF103473	MFS general substrate transporter
YPDSF_1194	SSF49478	Cna protein B-type domain
YPDSF_1195	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1195	SSF53850	Periplasmic binding protein-like II
YPDSF_1196	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_1197	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_1198	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_1199	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_1199	SSF52172	CheY-like
YPDSF_1200	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPDSF_1200	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_1200	SSF52172	CheY-like
YPDSF_1200	SSF53850	Periplasmic binding protein-like II
YPDSF_1200	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_1201	SSF49401	Bacterial adhesins
YPDSF_1202	SSF49354	PapD-like
YPDSF_1202	SSF49584	Periplasmic chaperone C-domain
YPDSF_1203	SSF141729	FimD N-terminal domain-like
YPDSF_1204	SSF49401	Bacterial adhesins
YPDSF_1205	SSF49354	PapD-like
YPDSF_1207	SSF49584	Periplasmic chaperone C-domain
YPDSF_1208	SSF56349	DNA breaking-rejoining enzymes
YPDSF_1209	SSF56322	ADC synthase
YPDSF_1210	SSF103473	MFS general substrate transporter
YPDSF_1211	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1211	SSF90123	ABC transporter transmembrane region
YPDSF_1212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1212	SSF90123	ABC transporter transmembrane region
YPDSF_1213	SSF46689	Homeodomain-like
YPDSF_1214	SSF47336	ACP-like
YPDSF_1214	SSF52777	CoA-dependent acyltransferases
YPDSF_1214	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1214	SSF56801	Acetyl-CoA synthetase-like
YPDSF_1215	SSF47336	ACP-like
YPDSF_1215	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1215	SSF52151	FabD/lysophospholipase-like
YPDSF_1215	SSF52777	CoA-dependent acyltransferases
YPDSF_1215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1215	SSF53474	alpha/beta-Hydrolases
YPDSF_1215	SSF53901	Thiolase-like
YPDSF_1215	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YPDSF_1216	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1217	SSF53474	alpha/beta-Hydrolases
YPDSF_1218	SSF56801	Acetyl-CoA synthetase-like
YPDSF_1219	SSF56935	Porins
YPDSF_1224	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPDSF_1225	SSF68989	Hemolysin expression modulating protein HHA
YPDSF_1226	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1227	SSF46689	Homeodomain-like
YPDSF_1227	SSF53098	Ribonuclease H-like
YPDSF_1230	SSF50331	MOP-like
YPDSF_1231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1232	SSF161098	MetI-like
YPDSF_1233	SSF161098	MetI-like
YPDSF_1234	SSF53850	Periplasmic binding protein-like II
YPDSF_1235	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1235	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_1236	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1236	SSF64288	Chorismate lyase-like
YPDSF_1244	SSF52200	Toll/Interleukin receptor TIR domain
YPDSF_1248	SSF160719	gpW/gp25-like
YPDSF_1254	SSF53098	Ribonuclease H-like
YPDSF_1255	SSF141452	Hcp1-like
YPDSF_1258	SSF56349	DNA breaking-rejoining enzymes
YPDSF_1260	SSF46600	C-terminal UvrC-binding domain of UvrB
YPDSF_1260	SSF47781	RuvA domain 2-like
YPDSF_1260	SSF82771	GIY-YIG endonuclease
YPDSF_1261	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_1261	SSF52172	CheY-like
YPDSF_1265	SSF56925	OMPA-like
YPDSF_1267	SSF117281	Kelch motif
YPDSF_1268	SSF52218	Flavoproteins
YPDSF_1269	SSF54909	Dimeric alpha+beta barrel
YPDSF_1270	SSF49503	Cupredoxins
YPDSF_1274	SSF47598	Ribbon-helix-helix
YPDSF_1274	SSF51730	FAD-linked oxidoreductase
YPDSF_1274	SSF53720	ALDH-like
YPDSF_1274	SSF81935	N-terminal domain of bifunctional PutA protein
YPDSF_1276	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1277	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1278	SSF161098	MetI-like
YPDSF_1281	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_1283	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPDSF_1283	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPDSF_1284	SSF64518	Phase 1 flagellin
YPDSF_1286	SSF101116	Flagellar export chaperone FliS
YPDSF_1288	SSF46689	Homeodomain-like
YPDSF_1288	SSF51215	Regulatory protein AraC
YPDSF_1289	SSF109604	HD-domain/PDEase-like
YPDSF_1289	SSF55781	GAF domain-like
YPDSF_1290	SSF48150	DNA-glycosylase
YPDSF_1295	SSF48029	FliG
YPDSF_1297	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1301	SSF101801	Surface presentation of antigens (SPOA)
YPDSF_1301	SSF103039	CheC-like
YPDSF_1302	SSF101801	Surface presentation of antigens (SPOA)
YPDSF_1307	SSF143100	TTHA1013/TTHA0281-like
YPDSF_1308	SSF53613	Ribokinase-like
YPDSF_1310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1311	SSF53822	Periplasmic binding protein-like I
YPDSF_1313	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1313	SSF53639	AraD/HMP-PK domain-like
YPDSF_1314	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_1314	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPDSF_1315	SSF64518	Phase 1 flagellin
YPDSF_1316	SSF64518	Phase 1 flagellin
YPDSF_1320	SSF117143	Flagellar hook protein flgE
YPDSF_1321	SSF117143	Flagellar hook protein flgE
YPDSF_1322	SSF117143	Flagellar hook protein flgE
YPDSF_1327	SSF101498	Anti-sigma factor FlgM
YPDSF_1328	SSF140566	FlgN-like
YPDSF_1329	SSF49373	Invasin/intimin cell-adhesion fragments
YPDSF_1329	SSF56436	C-type lectin-like
YPDSF_1330	SSF143422	Transposase IS200-like
YPDSF_1334	SSF160544	EscU C-terminal domain-like
YPDSF_1339	SSF81296	E set domains
YPDSF_1340	SSF47240	Ferritin-like
YPDSF_1341	SSF46575	DNA polymerase III theta subunit-like
YPDSF_1342	SSF53474	alpha/beta-Hydrolases
YPDSF_1343	SSF50993	Peptidase/esterase 'gauge' domain
YPDSF_1343	SSF53474	alpha/beta-Hydrolases
YPDSF_1345	SSF88697	PUA domain-like
YPDSF_1347	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1348	SSF51246	Rudiment single hybrid motif
YPDSF_1348	SSF52440	PreATP-grasp domain
YPDSF_1348	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_1350	SSF56322	ADC synthase
YPDSF_1351	SSF55811	Nudix
YPDSF_1352	SSF143548	Serine metabolism enzymes domain
YPDSF_1353	SSF50475	FMN-binding split barrel
YPDSF_1354	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YPDSF_1354	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YPDSF_1355	SSF103473	MFS general substrate transporter
YPDSF_1356	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_1357	SSF56529	FAH
YPDSF_1358	SSF55331	Tautomerase/MIF
YPDSF_1359	SSF53213	LigB-like
YPDSF_1360	SSF53720	ALDH-like
YPDSF_1361	SSF56529	FAH
YPDSF_1362	SSF56529	FAH
YPDSF_1363	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1366	SSF52728	PTS IIb component
YPDSF_1366	SSF53062	PTS system fructose IIA component-like
YPDSF_1371	SSF56935	Porins
YPDSF_1373	SSF55073	Nucleotide cyclase
YPDSF_1373	SSF55785	PYP-like sensor domain (PAS domain)
YPDSF_1375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1376	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
YPDSF_1377	SSF50249	Nucleic acid-binding proteins
YPDSF_1378	SSF56925	OMPA-like
YPDSF_1385	SSF46689	Homeodomain-like
YPDSF_1387	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1387	SSF90123	ABC transporter transmembrane region
YPDSF_1388	SSF143422	Transposase IS200-like
YPDSF_1389	SSF56112	Protein kinase-like (PK-like)
YPDSF_1390	SSF54909	Dimeric alpha+beta barrel
YPDSF_1391	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPDSF_1392	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_1392	SSF53822	Periplasmic binding protein-like I
YPDSF_1393	SSF103473	MFS general substrate transporter
YPDSF_1394	SSF51445	(Trans)glycosidases
YPDSF_1396	SSF56214	4'-phosphopantetheinyl transferase
YPDSF_1400	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_1400	SSF52172	CheY-like
YPDSF_1403	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_1404	SSF103473	MFS general substrate transporter
YPDSF_1406	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_1406	SSF69864	Argininosuccinate synthetase, C-terminal domain
YPDSF_1407	SSF51395	FMN-linked oxidoreductases
YPDSF_1408	SSF51604	Enolase C-terminal domain-like
YPDSF_1408	SSF54826	Enolase N-terminal domain-like
YPDSF_1409	SSF56529	FAH
YPDSF_1410	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1412	SSF103473	MFS general substrate transporter
YPDSF_1414	SSF49373	Invasin/intimin cell-adhesion fragments
YPDSF_1417	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1418	SSF53098	Ribonuclease H-like
YPDSF_1420	SSF56796	Dehydroquinate synthase-like
YPDSF_1423	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1426	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1427	SSF53850	Periplasmic binding protein-like II
YPDSF_1427	SSF54913	GlnB-like
YPDSF_1428	SSF53720	ALDH-like
YPDSF_1429	SSF53383	PLP-dependent transferases
YPDSF_1430	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_1430	SSF56784	HAD-like
YPDSF_1431	SSF52317	Class I glutamine amidotransferase-like
YPDSF_1432	SSF51366	Ribulose-phoshate binding barrel
YPDSF_1433	SSF51366	Ribulose-phoshate binding barrel
YPDSF_1434	SSF101386	all-alpha NTP pyrophosphatases
YPDSF_1434	SSF141734	HisI-like
YPDSF_1435	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_1435	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1436	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_1437	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_1439	SSF56935	Porins
YPDSF_1440	SSF53807	"Helical backbone" metal receptor
YPDSF_1441	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_1442	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_1443	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1445	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1446	SSF51905	FAD/NAD(P)-binding domain
YPDSF_1447	SSF53383	PLP-dependent transferases
YPDSF_1449	SSF54631	CBS-domain pair
YPDSF_1449	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_1451	SSF51283	dUTPase-like
YPDSF_1452	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1453	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YPDSF_1453	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1454	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPDSF_1454	SSF50249	Nucleic acid-binding proteins
YPDSF_1454	SSF52374	Nucleotidylyl transferase
YPDSF_1454	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
YPDSF_1455	SSF143422	Transposase IS200-like
YPDSF_1457	SSF53822	Periplasmic binding protein-like I
YPDSF_1458	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
YPDSF_1459	SSF103473	MFS general substrate transporter
YPDSF_1462	SSF53927	Cytidine deaminase-like
YPDSF_1463	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1463	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPDSF_1466	SSF46689	Homeodomain-like
YPDSF_1466	SSF53098	Ribonuclease H-like
YPDSF_1467	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1470	SSF53822	Periplasmic binding protein-like I
YPDSF_1472	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPDSF_1473	SSF103473	MFS general substrate transporter
YPDSF_1474	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1474	SSF53850	Periplasmic binding protein-like II
YPDSF_1475	SSF50129	GroES-like
YPDSF_1475	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1476	SSF53474	alpha/beta-Hydrolases
YPDSF_1479	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1480	SSF102114	Radical SAM enzymes
YPDSF_1481	SSF53218	Molybdenum cofactor biosynthesis proteins
YPDSF_1481	SSF63867	MoeA C-terminal domain-like
YPDSF_1481	SSF63882	MoeA N-terminal region -like
YPDSF_1482	SSF69572	Activating enzymes of the ubiquitin-like proteins
YPDSF_1484	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1487	SSF160719	gpW/gp25-like
YPDSF_1499	SSF51261	Duplicated hybrid motif
YPDSF_1499	SSF53955	Lysozyme-like
YPDSF_1502	SSF51261	Duplicated hybrid motif
YPDSF_1502	SSF53955	Lysozyme-like
YPDSF_1503	SSF69255	gp5 N-terminal domain-like
YPDSF_1503	SSF69279	Phage tail proteins
YPDSF_1504	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1504	SSF81923	Double Clp-N motif
YPDSF_1505	SSF141452	Hcp1-like
YPDSF_1507	SSF103088	OmpA-like
YPDSF_1512	SSF52151	FabD/lysophospholipase-like
YPDSF_1512	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YPDSF_1514	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1515	SSF52096	ClpP/crotonase
YPDSF_1516	SSF52096	ClpP/crotonase
YPDSF_1517	SSF53901	Thiolase-like
YPDSF_1518	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1519	SSF53901	Thiolase-like
YPDSF_1520	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_1522	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1523	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1523	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_1526	SSF53098	Ribonuclease H-like
YPDSF_1527	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
YPDSF_1528	SSF54975	Acylphosphatase/BLUF domain-like
YPDSF_1529	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1529	SSF88697	PUA domain-like
YPDSF_1530	SSF141255	YccV-like
YPDSF_1531	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1533	SSF52335	Methylglyoxal synthase-like
YPDSF_1534	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1537	SSF159894	YgaC/TfoX-N like
YPDSF_1538	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1539	SSF103088	OmpA-like
YPDSF_1539	SSF56925	OMPA-like
YPDSF_1540	SSF143422	Transposase IS200-like
YPDSF_1542	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_1543	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_1544	SSF53901	Thiolase-like
YPDSF_1545	SSF46689	Homeodomain-like
YPDSF_1545	SSF53098	Ribonuclease H-like
YPDSF_1546	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1547	SSF53901	Thiolase-like
YPDSF_1548	SSF143422	Transposase IS200-like
YPDSF_1549	SSF56214	4'-phosphopantetheinyl transferase
YPDSF_1550	SSF63892	Pyridoxine 5'-phosphate synthase
YPDSF_1551	SSF50249	Nucleic acid-binding proteins
YPDSF_1551	SSF57863	ArfGap/RecO-like zinc finger
YPDSF_1552	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1552	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YPDSF_1553	SSF54768	dsRNA-binding domain-like
YPDSF_1553	SSF69065	RNase III domain-like
YPDSF_1554	SSF51306	LexA/Signal peptidase
YPDSF_1555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1555	SSF54980	EF-G C-terminal domain-like
YPDSF_1559	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
YPDSF_1560	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPDSF_1560	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPDSF_1561	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YPDSF_1561	SSF51905	FAD/NAD(P)-binding domain
YPDSF_1561	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YPDSF_1562	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1563	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1564	SSF48403	Ankyrin repeat
YPDSF_1565	SSF53474	alpha/beta-Hydrolases
YPDSF_1566	SSF51998	PFL-like glycyl radical enzymes
YPDSF_1567	SSF52141	Uracil-DNA glycosylase-like
YPDSF_1568	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
YPDSF_1571	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_1572	SSF50891	Cyclophilin-like
YPDSF_1573	SSF160467	PH0987 N-terminal domain-like
YPDSF_1573	SSF50891	Cyclophilin-like
YPDSF_1574	SSF102705	NIF3 (NGG1p interacting factor 3)-like
YPDSF_1575	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_1576	SSF48173	Cryptochrome/photolyase FAD-binding domain
YPDSF_1576	SSF52425	Cryptochrome/photolyase, N-terminal domain
YPDSF_1581	SSF56784	HAD-like
YPDSF_1581	SSF81653	Calcium ATPase, transduction domain A
YPDSF_1581	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
YPDSF_1581	SSF81665	Calcium ATPase, transmembrane domain M
YPDSF_1585	SSF52172	CheY-like
YPDSF_1586	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_1589	SSF53738	Phosphoglucomutase, first 3 domains
YPDSF_1589	SSF55957	Phosphoglucomutase, C-terminal domain
YPDSF_1590	SSF47598	Ribbon-helix-helix
YPDSF_1590	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
YPDSF_1592	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_1593	SSF46689	Homeodomain-like
YPDSF_1593	SSF51182	RmlC-like cupins
YPDSF_1594	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
YPDSF_1596	SSF52794	PTS system IIB component-like
YPDSF_1600	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1600	SSF81324	Voltage-gated potassium channels
YPDSF_1601	SSF47752	Protein HNS-dependent expression A; HdeA
YPDSF_1606	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1608	SSF69287	Urease metallochaperone UreE, N-terminal domain
YPDSF_1609	SSF51338	Composite domain of metallo-dependent hydrolases
YPDSF_1609	SSF51556	Metallo-dependent hydrolases
YPDSF_1610	SSF51278	Urease, beta-subunit
YPDSF_1611	SSF54111	Urease, gamma-subunit
YPDSF_1612	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1613	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1614	SSF161098	MetI-like
YPDSF_1615	SSF161098	MetI-like
YPDSF_1616	SSF53850	Periplasmic binding protein-like II
YPDSF_1617	SSF50249	Nucleic acid-binding proteins
YPDSF_1620	SSF159894	YgaC/TfoX-N like
YPDSF_1622	SSF52218	Flavoproteins
YPDSF_1623	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YPDSF_1623	SSF51998	PFL-like glycyl radical enzymes
YPDSF_1624	SSF47240	Ferritin-like
YPDSF_1625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1625	SSF54631	CBS-domain pair
YPDSF_1626	SSF161098	MetI-like
YPDSF_1627	SSF53850	Periplasmic binding protein-like II
YPDSF_1628	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_1630	SSF53098	Ribonuclease H-like
YPDSF_1631	SSF53098	Ribonuclease H-like
YPDSF_1632	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1633	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_1634	SSF53955	Lysozyme-like
YPDSF_1634	SSF54106	LysM domain
YPDSF_1635	SSF56219	DNase I-like
YPDSF_1636	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_1637	SSF56784	HAD-like
YPDSF_1638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1638	SSF55021	ACT-like
YPDSF_1639	SSF161098	MetI-like
YPDSF_1640	SSF53850	Periplasmic binding protein-like II
YPDSF_1642	SSF118196	YaeB-like
YPDSF_1643	SSF52954	Class II aaRS ABD-related
YPDSF_1643	SSF55681	Class II aaRS and biotin synthetases
YPDSF_1643	SSF55826	YbaK/ProRS associated domain
YPDSF_1645	SSF75620	Release factor
YPDSF_1646	SSF52980	Restriction endonuclease-like
YPDSF_1648	SSF101744	Rof/RNase P subunit-like
YPDSF_1649	SSF46626	Cytochrome c
YPDSF_1650	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_1650	SSF56037	PheT/TilS domain
YPDSF_1650	SSF82829	MesJ substrate recognition domain-like
YPDSF_1651	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YPDSF_1652	SSF52096	ClpP/crotonase
YPDSF_1653	SSF89550	PHP domain-like
YPDSF_1654	SSF53098	Ribonuclease H-like
YPDSF_1655	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_1656	SSF51161	Trimeric LpxA-like enzymes
YPDSF_1657	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_1658	SSF51161	Trimeric LpxA-like enzymes
YPDSF_1659	SSF111384	OmpH-like
YPDSF_1661	SSF50156	PDZ domain-like
YPDSF_1663	SSF64005	Undecaprenyl diphosphate synthase
YPDSF_1664	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1664	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_1664	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
YPDSF_1665	SSF55194	Ribosome recycling factor, RRF
YPDSF_1666	SSF53633	Carbamate kinase-like
YPDSF_1668	SSF46934	UBA-like
YPDSF_1668	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
YPDSF_1669	SSF52313	Ribosomal protein S2
YPDSF_1670	SSF55920	Creatinase/aminopeptidase
YPDSF_1671	SSF109604	HD-domain/PDEase-like
YPDSF_1671	SSF55021	ACT-like
YPDSF_1671	SSF81301	Nucleotidyltransferase
YPDSF_1671	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
YPDSF_1671	SSF81891	Poly A polymerase C-terminal region-like
YPDSF_1672	SSF51161	Trimeric LpxA-like enzymes
YPDSF_1674	SSF52218	Flavoproteins
YPDSF_1675	SSF55120	Pseudouridine synthase
YPDSF_1676	SSF158452	YqcC-like
YPDSF_1677	SSF143422	Transposase IS200-like
YPDSF_1679	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPDSF_1680	SSF102405	MCP/YpsA-like
YPDSF_1681	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YPDSF_1681	SSF88723	PIN domain-like
YPDSF_1682	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1684	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1684	SSF53850	Periplasmic binding protein-like II
YPDSF_1685	SSF53383	PLP-dependent transferases
YPDSF_1686	SSF82649	SufE/NifU
YPDSF_1687	SSF69572	Activating enzymes of the ubiquitin-like proteins
YPDSF_1688	SSF50685	Barwin-like endoglucanases
YPDSF_1689	SSF53187	Zn-dependent exopeptidases
YPDSF_1690	SSF53633	Carbamate kinase-like
YPDSF_1691	SSF46689	Homeodomain-like
YPDSF_1691	SSF53098	Ribonuclease H-like
YPDSF_1692	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1693	SSF53633	Carbamate kinase-like
YPDSF_1693	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1694	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1695	SSF52980	Restriction endonuclease-like
YPDSF_1696	SSF63411	LuxS/MPP-like metallohydrolase
YPDSF_1697	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1697	SSF52980	Restriction endonuclease-like
YPDSF_1701	SSF54523	Pili subunits
YPDSF_1702	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
YPDSF_1704	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YPDSF_1704	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_1704	SSF52009	Phosphohistidine domain
YPDSF_1704	SSF55781	GAF domain-like
YPDSF_1705	SSF55811	Nudix
YPDSF_1706	SSF52980	Restriction endonuclease-like
YPDSF_1707	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_1709	SSF103473	MFS general substrate transporter
YPDSF_1710	SSF56801	Acetyl-CoA synthetase-like
YPDSF_1710	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPDSF_1711	SSF50692	ADC-like
YPDSF_1711	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_1712	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_1712	SSF53822	Periplasmic binding protein-like I
YPDSF_1713	SSF50621	Alanine racemase C-terminal domain-like
YPDSF_1713	SSF51419	PLP-binding barrel
YPDSF_1714	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1714	SSF53850	Periplasmic binding protein-like II
YPDSF_1715	SSF103473	MFS general substrate transporter
YPDSF_1716	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1716	SSF53850	Periplasmic binding protein-like II
YPDSF_1717	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_1718	SSF52833	Thioredoxin-like
YPDSF_1719	SSF47170	Aspartate receptor, ligand-binding domain
YPDSF_1719	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_1722	SSF51182	RmlC-like cupins
YPDSF_1723	SSF51182	RmlC-like cupins
YPDSF_1724	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1726	SSF160964	MalF N-terminal region-like
YPDSF_1726	SSF161098	MetI-like
YPDSF_1727	SSF161098	MetI-like
YPDSF_1728	SSF50331	MOP-like
YPDSF_1728	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1729	SSF53850	Periplasmic binding protein-like II
YPDSF_1730	SSF56935	Porins
YPDSF_1732	SSF118215	Proton glutamate symport protein
YPDSF_1733	SSF47090	PGBD-like
YPDSF_1733	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YPDSF_1734	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1734	SSF55781	GAF domain-like
YPDSF_1735	SSF82171	DPP6 N-terminal domain-like
YPDSF_1736	SSF103473	MFS general substrate transporter
YPDSF_1737	SSF49354	PapD-like
YPDSF_1737	SSF49584	Periplasmic chaperone C-domain
YPDSF_1738	SSF49401	Bacterial adhesins
YPDSF_1739	SSF141729	FimD N-terminal domain-like
YPDSF_1740	SSF49354	PapD-like
YPDSF_1740	SSF49584	Periplasmic chaperone C-domain
YPDSF_1741	SSF49401	Bacterial adhesins
YPDSF_1743	SSF50156	PDZ domain-like
YPDSF_1743	SSF52096	ClpP/crotonase
YPDSF_1744	SSF48657	FinO-like
YPDSF_1745	SSF55781	GAF domain-like
YPDSF_1751	SSF49354	PapD-like
YPDSF_1755	SSF88697	PUA domain-like
YPDSF_1757	SSF46689	Homeodomain-like
YPDSF_1757	SSF53098	Ribonuclease H-like
YPDSF_1758	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1759	SSF52151	FabD/lysophospholipase-like
YPDSF_1761	SSF50621	Alanine racemase C-terminal domain-like
YPDSF_1761	SSF51419	PLP-binding barrel
YPDSF_1763	SSF101967	Adhesin YadA, collagen-binding domain
YPDSF_1763	SSF54523	Pili subunits
YPDSF_1764	SSF101967	Adhesin YadA, collagen-binding domain
YPDSF_1765	SSF47090	PGBD-like
YPDSF_1765	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YPDSF_1767	SSF75708	Chemotaxis phosphatase CheZ
YPDSF_1768	SSF52172	CheY-like
YPDSF_1769	SSF52172	CheY-like
YPDSF_1769	SSF52738	Methylesterase CheB, C-terminal domain
YPDSF_1770	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
YPDSF_1770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1771	SSF47170	Aspartate receptor, ligand-binding domain
YPDSF_1771	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_1772	SSF47170	Aspartate receptor, ligand-binding domain
YPDSF_1772	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_1775	SSF103515	Autotransporter
YPDSF_1775	SSF51126	Pectin lyase-like
YPDSF_1777	SSF51658	Xylose isomerase-like
YPDSF_1778	SSF55298	YjgF-like
YPDSF_1779	SSF103473	MFS general substrate transporter
YPDSF_1780	SSF50341	CheW-like
YPDSF_1781	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPDSF_1781	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_1781	SSF50341	CheW-like
YPDSF_1781	SSF55052	CheY-binding domain of CheA
YPDSF_1781	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_1782	SSF103088	OmpA-like
YPDSF_1784	SSF160930	FlhC-like
YPDSF_1785	SSF63592	Flagellar transcriptional activator FlhD
YPDSF_1786	SSF56784	HAD-like
YPDSF_1786	SSF81653	Calcium ATPase, transduction domain A
YPDSF_1786	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
YPDSF_1786	SSF81665	Calcium ATPase, transmembrane domain M
YPDSF_1788	SSF47170	Aspartate receptor, ligand-binding domain
YPDSF_1788	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_1789	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_1791	SSF50249	Nucleic acid-binding proteins
YPDSF_1792	SSF49303	beta-Galactosidase/glucuronidase domain
YPDSF_1792	SSF49785	Galactose-binding domain-like
YPDSF_1792	SSF51445	(Trans)glycosidases
YPDSF_1792	SSF74650	Galactose mutarotase-like
YPDSF_1793	SSF50129	GroES-like
YPDSF_1793	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1796	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1796	SSF54909	Dimeric alpha+beta barrel
YPDSF_1799	SSF53254	Phosphoglycerate mutase-like
YPDSF_1802	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1803	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1804	SSF55785	PYP-like sensor domain (PAS domain)
YPDSF_1804	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_1806	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_1806	SSF53822	Periplasmic binding protein-like I
YPDSF_1807	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPDSF_1808	SSF55120	Pseudouridine synthase
YPDSF_1809	SSF55811	Nudix
YPDSF_1810	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_1811	SSF101322	YcfC-like
YPDSF_1812	SSF48557	L-aspartase-like
YPDSF_1813	SSF56925	OMPA-like
YPDSF_1814	SSF52172	CheY-like
YPDSF_1815	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_1815	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_1816	SSF51197	Clavaminate synthase-like
YPDSF_1817	SSF53187	Zn-dependent exopeptidases
YPDSF_1817	SSF55031	Bacterial exopeptidase dimerisation domain
YPDSF_1818	SSF52467	DHS-like NAD/FAD-binding domain
YPDSF_1819	SSF53067	Actin-like ATPase domain
YPDSF_1820	SSF53067	Actin-like ATPase domain
YPDSF_1822	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1824	SSF141259	CarD-like
YPDSF_1824	SSF143517	TRCF domain-like
YPDSF_1824	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1830	SSF51905	FAD/NAD(P)-binding domain
YPDSF_1831	SSF53474	alpha/beta-Hydrolases
YPDSF_1832	SSF51445	(Trans)glycosidases
YPDSF_1833	SSF56112	Protein kinase-like (PK-like)
YPDSF_1836	SSF54197	HIT-like
YPDSF_1837	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1837	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPDSF_1838	SSF143422	Transposase IS200-like
YPDSF_1839	SSF55604	Glucose permease domain IIB
YPDSF_1840	SSF51556	Metallo-dependent hydrolases
YPDSF_1841	SSF48019	post-AAA+ oligomerization domain-like
YPDSF_1841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1842	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1844	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
YPDSF_1845	SSF143422	Transposase IS200-like
YPDSF_1846	SSF53901	Thiolase-like
YPDSF_1847	SSF47336	ACP-like
YPDSF_1848	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1849	SSF52151	FabD/lysophospholipase-like
YPDSF_1849	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YPDSF_1850	SSF53901	Thiolase-like
YPDSF_1851	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPDSF_1852	SSF57829	Zn-binding ribosomal proteins
YPDSF_1854	SSF52972	ITPase-like
YPDSF_1855	SSF55120	Pseudouridine synthase
YPDSF_1855	SSF55174	Alpha-L RNA-binding motif
YPDSF_1856	SSF50249	Nucleic acid-binding proteins
YPDSF_1858	SSF54909	Dimeric alpha+beta barrel
YPDSF_1859	SSF51556	Metallo-dependent hydrolases
YPDSF_1860	SSF54857	DNA damage-inducible protein DinI
YPDSF_1863	SSF51905	FAD/NAD(P)-binding domain
YPDSF_1863	SSF54373	FAD-linked reductases, C-terminal domain
YPDSF_1864	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_1866	SSF52821	Rhodanese/Cell cycle control phosphatase
YPDSF_1870	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_1871	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1872	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_1872	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
YPDSF_1873	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1873	SSF53850	Periplasmic binding protein-like II
YPDSF_1874	SSF103473	MFS general substrate transporter
YPDSF_1875	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_1876	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_1881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1883	SSF50182	Sm-like ribonucleoproteins
YPDSF_1885	SSF56925	OMPA-like
YPDSF_1886	SSF75005	Arabinanase/levansucrase/invertase
YPDSF_1887	SSF75005	Arabinanase/levansucrase/invertase
YPDSF_1888	SSF161098	MetI-like
YPDSF_1889	SSF161098	MetI-like
YPDSF_1890	SSF53850	Periplasmic binding protein-like II
YPDSF_1891	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_1891	SSF53822	Periplasmic binding protein-like I
YPDSF_1892	SSF53738	Phosphoglucomutase, first 3 domains
YPDSF_1892	SSF55957	Phosphoglucomutase, C-terminal domain
YPDSF_1893	SSF50331	MOP-like
YPDSF_1893	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1902	SSF51126	Pectin lyase-like
YPDSF_1904	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_1904	SSF54292	2Fe-2S ferredoxin-like
YPDSF_1904	SSF63380	Riboflavin synthase domain-like
YPDSF_1905	SSF50022	ISP domain
YPDSF_1905	SSF55961	Bet v1-like
YPDSF_1907	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPDSF_1908	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1908	SSF53850	Periplasmic binding protein-like II
YPDSF_1909	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_1909	SSF53822	Periplasmic binding protein-like I
YPDSF_1913	SSF53822	Periplasmic binding protein-like I
YPDSF_1914	SSF50129	GroES-like
YPDSF_1914	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1917	SSF161111	Cation efflux protein transmembrane domain-like
YPDSF_1918	SSF56925	OMPA-like
YPDSF_1919	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_1920	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_1921	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1922	SSF47240	Ferritin-like
YPDSF_1923	SSF48452	TPR-like
YPDSF_1924	SSF53850	Periplasmic binding protein-like II
YPDSF_1925	SSF161098	MetI-like
YPDSF_1926	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1927	SSF55785	PYP-like sensor domain (PAS domain)
YPDSF_1927	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_1929	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_1930	SSF159871	YdgH-like
YPDSF_1932	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YPDSF_1932	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YPDSF_1933	SSF56801	Acetyl-CoA synthetase-like
YPDSF_1934	SSF51604	Enolase C-terminal domain-like
YPDSF_1934	SSF54826	Enolase N-terminal domain-like
YPDSF_1935	SSF52096	ClpP/crotonase
YPDSF_1936	SSF53474	alpha/beta-Hydrolases
YPDSF_1937	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_1938	SSF56322	ADC synthase
YPDSF_1943	SSF143975	IlvD/EDD N-terminal domain-like
YPDSF_1943	SSF52016	LeuD/IlvD-like
YPDSF_1944	SSF143744	GlcG-like
YPDSF_1945	SSF103473	MFS general substrate transporter
YPDSF_1946	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1946	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPDSF_1947	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_1947	SSF53822	Periplasmic binding protein-like I
YPDSF_1948	SSF51445	(Trans)glycosidases
YPDSF_1949	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1951	SSF51197	Clavaminate synthase-like
YPDSF_1958	SSF54862	4Fe-4S ferredoxins
YPDSF_1960	SSF50692	ADC-like
YPDSF_1960	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_1960	SSF54292	2Fe-2S ferredoxin-like
YPDSF_1960	SSF54862	4Fe-4S ferredoxins
YPDSF_1961	SSF140490	Nqo1C-terminal domain-like
YPDSF_1961	SSF142019	Nqo1 FMN-binding domain-like
YPDSF_1961	SSF142984	Nqo1 middle domain-like
YPDSF_1962	SSF52833	Thioredoxin-like
YPDSF_1963	SSF143243	Nqo5-like
YPDSF_1963	SSF56762	HydB/Nqo4-like
YPDSF_1964	SSF56770	HydA/Nqo6-like
YPDSF_1966	SSF46785	"Winged helix" DNA-binding domain
YPDSF_1966	SSF53850	Periplasmic binding protein-like II
YPDSF_1967	SSF53383	PLP-dependent transferases
YPDSF_1968	SSF109604	HD-domain/PDEase-like
YPDSF_1969	SSF116726	TrkA C-terminal domain-like
YPDSF_1970	SSF56784	HAD-like
YPDSF_1971	SSF116960	YfbU-like
YPDSF_1973	SSF53067	Actin-like ATPase domain
YPDSF_1974	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1974	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPDSF_1974	SSF75138	HprK N-terminal domain-like
YPDSF_1975	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_1975	SSF53822	Periplasmic binding protein-like I
YPDSF_1976	SSF55804	Phoshotransferase/anion transport protein
YPDSF_1977	SSF52794	PTS system IIB component-like
YPDSF_1979	SSF55811	Nudix
YPDSF_1982	SSF141868	EAL domain-like
YPDSF_1983	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1984	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_1985	SSF161098	MetI-like
YPDSF_1986	SSF161098	MetI-like
YPDSF_1987	SSF53850	Periplasmic binding protein-like II
YPDSF_1988	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YPDSF_1989	SSF53271	PRTase-like
YPDSF_1989	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_1991	SSF110997	Sporulation related repeat
YPDSF_1992	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPDSF_1992	SSF53623	MurD-like peptide ligases, catalytic domain
YPDSF_1993	SSF52096	ClpP/crotonase
YPDSF_1995	SSF55120	Pseudouridine synthase
YPDSF_1996	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1996	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_1997	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_1997	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPDSF_1998	SSF46689	Homeodomain-like
YPDSF_1998	SSF51182	RmlC-like cupins
YPDSF_1999	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_2001	SSF49401	Bacterial adhesins
YPDSF_2002	SSF53681	Aspartate/glutamate racemase
YPDSF_2003	SSF53901	Thiolase-like
YPDSF_2004	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2004	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2008	SSF55166	Hedgehog/DD-peptidase
YPDSF_2009	SSF103263	Chorismate synthase, AroC
YPDSF_2010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2011	SSF160443	SMR domain-like
YPDSF_2012	SSF53254	Phosphoglycerate mutase-like
YPDSF_2013	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_2013	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2013	SSF52096	ClpP/crotonase
YPDSF_2014	SSF53901	Thiolase-like
YPDSF_2016	SSF56935	Porins
YPDSF_2018	SSF48452	TPR-like
YPDSF_2020	SSF52833	Thioredoxin-like
YPDSF_2022	SSF82093	Heme chaperone CcmE
YPDSF_2026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2028	SSF140478	LemA-like
YPDSF_2030	SSF57783	Zinc beta-ribbon
YPDSF_2030	SSF82057	Prokaryotic SH3-related domain
YPDSF_2032	SSF160719	gpW/gp25-like
YPDSF_2033	SSF144059	ImpE-like
YPDSF_2036	SSF69255	gp5 N-terminal domain-like
YPDSF_2036	SSF69279	Phage tail proteins
YPDSF_2036	SSF69349	Phage fibre proteins
YPDSF_2039	SSF103088	OmpA-like
YPDSF_2040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2041	SSF46689	Homeodomain-like
YPDSF_2041	SSF53098	Ribonuclease H-like
YPDSF_2045	SSF141452	Hcp1-like
YPDSF_2048	SSF49401	Bacterial adhesins
YPDSF_2051	SSF141729	FimD N-terminal domain-like
YPDSF_2052	SSF49354	PapD-like
YPDSF_2052	SSF49584	Periplasmic chaperone C-domain
YPDSF_2053	SSF49401	Bacterial adhesins
YPDSF_2054	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2054	SSF81923	Double Clp-N motif
YPDSF_2059	SSF49401	Bacterial adhesins
YPDSF_2060	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_2062	SSF103088	OmpA-like
YPDSF_2063	SSF55724	Mog1p/PsbP-like
YPDSF_2064	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2065	SSF53955	Lysozyme-like
YPDSF_2066	SSF53850	Periplasmic binding protein-like II
YPDSF_2067	SSF161098	MetI-like
YPDSF_2068	SSF50331	MOP-like
YPDSF_2068	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2070	SSF141452	Hcp1-like
YPDSF_2072	SSF50692	ADC-like
YPDSF_2072	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_2073	SSF54862	4Fe-4S ferredoxins
YPDSF_2075	SSF89155	TorD-like
YPDSF_2076	SSF54862	4Fe-4S ferredoxins
YPDSF_2079	SSF52964	TolB, N-terminal domain
YPDSF_2081	SSF81342	Transmembrane di-heme cytochromes
YPDSF_2082	SSF53383	PLP-dependent transferases
YPDSF_2083	SSF51197	Clavaminate synthase-like
YPDSF_2084	SSF53067	Actin-like ATPase domain
YPDSF_2086	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2086	SSF53850	Periplasmic binding protein-like II
YPDSF_2087	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_2092	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
YPDSF_2092	SSF52374	Nucleotidylyl transferase
YPDSF_2093	SSF143422	Transposase IS200-like
YPDSF_2097	SSF47781	RuvA domain 2-like
YPDSF_2097	SSF50249	Nucleic acid-binding proteins
YPDSF_2097	SSF52113	BRCT domain
YPDSF_2097	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YPDSF_2098	SSF64383	Cell-division protein ZipA, C-terminal domain
YPDSF_2100	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_2101	SSF55594	HPr-like
YPDSF_2102	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YPDSF_2102	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_2102	SSF52009	Phosphohistidine domain
YPDSF_2103	SSF51261	Duplicated hybrid motif
YPDSF_2104	SSF143422	Transposase IS200-like
YPDSF_2105	SSF158472	HAMP domain-like
YPDSF_2105	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_2105	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2106	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2106	SSF52172	CheY-like
YPDSF_2107	SSF111369	HlyD-like secretion proteins
YPDSF_2108	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2109	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2109	SSF52821	Rhodanese/Cell cycle control phosphatase
YPDSF_2109	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPDSF_2111	SSF53092	Creatinase/prolidase N-terminal domain
YPDSF_2111	SSF55920	Creatinase/aminopeptidase
YPDSF_2112	SSF53092	Creatinase/prolidase N-terminal domain
YPDSF_2113	SSF53383	PLP-dependent transferases
YPDSF_2114	SSF53300	vWA-like
YPDSF_2115	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_2115	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2116	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2116	SSF52172	CheY-like
YPDSF_2117	SSF52058	L domain-like
YPDSF_2118	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_2119	SSF50331	MOP-like
YPDSF_2119	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2120	SSF161098	MetI-like
YPDSF_2121	SSF161098	MetI-like
YPDSF_2122	SSF53850	Periplasmic binding protein-like II
YPDSF_2123	SSF103473	MFS general substrate transporter
YPDSF_2124	SSF46689	Homeodomain-like
YPDSF_2124	SSF53697	SIS domain
YPDSF_2125	SSF51197	Clavaminate synthase-like
YPDSF_2126	SSF53067	Actin-like ATPase domain
YPDSF_2127	SSF52058	L domain-like
YPDSF_2128	SSF51366	Ribulose-phoshate binding barrel
YPDSF_2129	SSF51569	Aldolase
YPDSF_2130	SSF54909	Dimeric alpha+beta barrel
YPDSF_2133	SSF101756	Hypothetical protein YgiW
YPDSF_2134	SSF103515	Autotransporter
YPDSF_2134	SSF51126	Pectin lyase-like
YPDSF_2136	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_2137	SSF102886	Coproporphyrinogen III oxidase
YPDSF_2139	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2139	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPDSF_2139	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPDSF_2140	SSF55811	Nudix
YPDSF_2141	SSF48695	Multiheme cytochromes
YPDSF_2142	SSF48695	Multiheme cytochromes
YPDSF_2143	SSF50692	ADC-like
YPDSF_2143	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_2145	SSF54862	4Fe-4S ferredoxins
YPDSF_2146	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2146	SSF52172	CheY-like
YPDSF_2148	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPDSF_2148	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPDSF_2148	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPDSF_2151	SSF102114	Radical SAM enzymes
YPDSF_2152	SSF53649	Alkaline phosphatase-like
YPDSF_2153	SSF50331	MOP-like
YPDSF_2153	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2154	SSF161098	MetI-like
YPDSF_2155	SSF53850	Periplasmic binding protein-like II
YPDSF_2156	SSF48452	TPR-like
YPDSF_2157	SSF52833	Thioredoxin-like
YPDSF_2158	SSF53187	Zn-dependent exopeptidases
YPDSF_2158	SSF55031	Bacterial exopeptidase dimerisation domain
YPDSF_2159	SSF55166	Hedgehog/DD-peptidase
YPDSF_2161	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2161	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_2164	SSF56104	SAICAR synthase-like
YPDSF_2165	SSF143422	Transposase IS200-like
YPDSF_2167	SSF51569	Aldolase
YPDSF_2168	SSF55021	ACT-like
YPDSF_2169	SSF52833	Thioredoxin-like
YPDSF_2173	SSF48452	TPR-like
YPDSF_2174	SSF52833	Thioredoxin-like
YPDSF_2175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2176	SSF143422	Transposase IS200-like
YPDSF_2177	SSF53271	PRTase-like
YPDSF_2178	SSF55326	PurM N-terminal domain-like
YPDSF_2178	SSF56042	PurM C-terminal domain-like
YPDSF_2179	SSF53328	Formyltransferase
YPDSF_2180	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_2183	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2184	SSF161098	MetI-like
YPDSF_2185	SSF161098	MetI-like
YPDSF_2185	SSF82171	DPP6 N-terminal domain-like
YPDSF_2186	SSF140356	PPK N-terminal domain-like
YPDSF_2186	SSF143724	PHP14-like
YPDSF_2186	SSF56024	Phospholipase D/nuclease
YPDSF_2187	SSF109604	HD-domain/PDEase-like
YPDSF_2187	SSF53067	Actin-like ATPase domain
YPDSF_2189	SSF158791	MgtE N-terminal domain-like
YPDSF_2189	SSF161093	MgtE membrane domain-like
YPDSF_2189	SSF54631	CBS-domain pair
YPDSF_2190	SSF53067	Actin-like ATPase domain
YPDSF_2191	SSF161098	MetI-like
YPDSF_2192	SSF161098	MetI-like
YPDSF_2193	SSF53850	Periplasmic binding protein-like II
YPDSF_2194	SSF53383	PLP-dependent transferases
YPDSF_2195	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2195	SSF53383	PLP-dependent transferases
YPDSF_2196	SSF50331	MOP-like
YPDSF_2196	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2197	SSF111369	HlyD-like secretion proteins
YPDSF_2198	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPDSF_2198	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPDSF_2198	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPDSF_2201	SSF103473	MFS general substrate transporter
YPDSF_2202	SSF158472	HAMP domain-like
YPDSF_2202	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_2202	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2203	SSF52172	CheY-like
YPDSF_2204	SSF160113	YegP-like
YPDSF_2206	SSF111331	NAD kinase/diacylglycerol kinase-like
YPDSF_2207	SSF89872	Inhibitor of vertebrate lysozyme, Ivy
YPDSF_2209	SSF53613	Ribokinase-like
YPDSF_2214	SSF143422	Transposase IS200-like
YPDSF_2215	SSF52317	Class I glutamine amidotransferase-like
YPDSF_2215	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2215	SSF54810	GMP synthetase C-terminal dimerisation domain
YPDSF_2216	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YPDSF_2216	SSF54631	CBS-domain pair
YPDSF_2218	SSF161187	YfgJ-like
YPDSF_2220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2221	SSF50998	Quinoprotein alcohol dehydrogenase-like
YPDSF_2222	SSF48452	TPR-like
YPDSF_2223	SSF52954	Class II aaRS ABD-related
YPDSF_2223	SSF55681	Class II aaRS and biotin synthetases
YPDSF_2224	SSF51604	Enolase C-terminal domain-like
YPDSF_2224	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YPDSF_2225	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_2226	SSF48452	TPR-like
YPDSF_2227	SSF102114	Radical SAM enzymes
YPDSF_2228	SSF54919	Nucleoside diphosphate kinase, NDK
YPDSF_2229	SSF49695	gamma-Crystallin-like
YPDSF_2230	SSF103515	Autotransporter
YPDSF_2230	SSF51126	Pectin lyase-like
YPDSF_2231	SSF103515	Autotransporter
YPDSF_2231	SSF51126	Pectin lyase-like
YPDSF_2232	SSF103515	Autotransporter
YPDSF_2234	SSF53187	Zn-dependent exopeptidases
YPDSF_2235	SSF140319	IscX-like
YPDSF_2236	SSF54292	2Fe-2S ferredoxin-like
YPDSF_2237	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YPDSF_2237	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YPDSF_2237	SSF53067	Actin-like ATPase domain
YPDSF_2238	SSF46565	Chaperone J-domain
YPDSF_2238	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
YPDSF_2239	SSF89360	HesB-like domain
YPDSF_2240	SSF82649	SufE/NifU
YPDSF_2241	SSF53383	PLP-dependent transferases
YPDSF_2242	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2243	SSF75217	alpha/beta knot
YPDSF_2244	SSF56655	Carbohydrate phosphatase
YPDSF_2247	SSF63520	PTS-regulatory domain, PRD
YPDSF_2248	SSF103473	MFS general substrate transporter
YPDSF_2249	SSF56925	OMPA-like
YPDSF_2251	SSF53383	PLP-dependent transferases
YPDSF_2252	SSF46458	Globin-like
YPDSF_2252	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_2252	SSF63380	Riboflavin synthase domain-like
YPDSF_2253	SSF46689	Homeodomain-like
YPDSF_2253	SSF53098	Ribonuclease H-like
YPDSF_2254	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2255	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2255	SSF53850	Periplasmic binding protein-like II
YPDSF_2256	SSF54913	GlnB-like
YPDSF_2257	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2257	SSF56317	Carbon-nitrogen hydrolase
YPDSF_2258	SSF46689	Homeodomain-like
YPDSF_2258	SSF52172	CheY-like
YPDSF_2258	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2260	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_2260	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2261	SSF143422	Transposase IS200-like
YPDSF_2264	SSF109736	FGAM synthase PurL, linker domain
YPDSF_2264	SSF52317	Class I glutamine amidotransferase-like
YPDSF_2264	SSF55326	PurM N-terminal domain-like
YPDSF_2264	SSF56042	PurM C-terminal domain-like
YPDSF_2264	SSF82697	PurS-like
YPDSF_2265	SSF53850	Periplasmic binding protein-like II
YPDSF_2265	SSF53955	Lysozyme-like
YPDSF_2266	SSF53927	Cytidine deaminase-like
YPDSF_2267	SSF56784	HAD-like
YPDSF_2268	SSF46934	UBA-like
YPDSF_2268	SSF53697	SIS domain
YPDSF_2269	SSF46689	Homeodomain-like
YPDSF_2269	SSF53697	SIS domain
YPDSF_2270	SSF54862	4Fe-4S ferredoxins
YPDSF_2271	SSF143422	Transposase IS200-like
YPDSF_2273	SSF159594	XCC0632-like
YPDSF_2276	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2277	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2278	SSF141673	MOSC N-terminal domain-like
YPDSF_2278	SSF50800	PK beta-barrel domain-like
YPDSF_2278	SSF54292	2Fe-2S ferredoxin-like
YPDSF_2280	SSF51395	FMN-linked oxidoreductases
YPDSF_2281	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPDSF_2281	SSF63737	Leukotriene A4 hydrolase N-terminal domain
YPDSF_2282	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YPDSF_2282	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YPDSF_2283	SSF50249	Nucleic acid-binding proteins
YPDSF_2283	SSF55681	Class II aaRS and biotin synthetases
YPDSF_2284	SSF56935	Porins
YPDSF_2285	SSF53383	PLP-dependent transferases
YPDSF_2286	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_2287	SSF55166	Hedgehog/DD-peptidase
YPDSF_2288	SSF141523	L,D-transpeptidase catalytic domain-like
YPDSF_2288	SSF47090	PGBD-like
YPDSF_2289	SSF143422	Transposase IS200-like
YPDSF_2290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2292	SSF140570	MukF C-terminal domain-like
YPDSF_2292	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2293	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2294	SSF56112	Protein kinase-like (PK-like)
YPDSF_2295	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_2296	SSF158997	Trm112p-like
YPDSF_2297	SSF50249	Nucleic acid-binding proteins
YPDSF_2299	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2300	SSF90123	ABC transporter transmembrane region
YPDSF_2301	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_2302	SSF47729	IHF-like DNA-binding proteins
YPDSF_2303	SSF50249	Nucleic acid-binding proteins
YPDSF_2304	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2305	SSF55205	EPT/RTPC-like
YPDSF_2306	SSF53383	PLP-dependent transferases
YPDSF_2307	SSF54523	Pili subunits
YPDSF_2308	SSF101967	Adhesin YadA, collagen-binding domain
YPDSF_2308	SSF54523	Pili subunits
YPDSF_2309	SSF53774	Glutaminase/Asparaginase
YPDSF_2312	SSF51998	PFL-like glycyl radical enzymes
YPDSF_2314	SSF102114	Radical SAM enzymes
YPDSF_2315	SSF103473	MFS general substrate transporter
YPDSF_2316	SSF46589	tRNA-binding arm
YPDSF_2316	SSF55681	Class II aaRS and biotin synthetases
YPDSF_2317	SSF48019	post-AAA+ oligomerization domain-like
YPDSF_2317	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2318	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
YPDSF_2319	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2319	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2320	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2320	SSF54909	Dimeric alpha+beta barrel
YPDSF_2321	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2322	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2322	SSF90123	ABC transporter transmembrane region
YPDSF_2323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2323	SSF90123	ABC transporter transmembrane region
YPDSF_2324	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_2325	SSF50249	Nucleic acid-binding proteins
YPDSF_2326	SSF143422	Transposase IS200-like
YPDSF_2327	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2327	SSF81923	Double Clp-N motif
YPDSF_2328	SSF54736	ClpS-like
YPDSF_2330	SSF50249	Nucleic acid-binding proteins
YPDSF_2331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2332	SSF111369	HlyD-like secretion proteins
YPDSF_2335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2337	SSF56821	Prismane protein-like
YPDSF_2338	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_2338	SSF54292	2Fe-2S ferredoxin-like
YPDSF_2338	SSF63380	Riboflavin synthase domain-like
YPDSF_2339	SSF52467	DHS-like NAD/FAD-binding domain
YPDSF_2339	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_2340	SSF53383	PLP-dependent transferases
YPDSF_2341	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2342	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2345	SSF48600	Chorismate mutase II
YPDSF_2346	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2347	SSF53850	Periplasmic binding protein-like II
YPDSF_2348	SSF161098	MetI-like
YPDSF_2349	SSF161098	MetI-like
YPDSF_2351	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_2352	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2353	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2355	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_2356	SSF53807	"Helical backbone" metal receptor
YPDSF_2357	SSF117892	Band 7/SPFH domain
YPDSF_2359	SSF53850	Periplasmic binding protein-like II
YPDSF_2360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2362	SSF161098	MetI-like
YPDSF_2363	SSF161098	MetI-like
YPDSF_2364	SSF50331	MOP-like
YPDSF_2364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2366	SSF53850	Periplasmic binding protein-like II
YPDSF_2369	SSF52833	Thioredoxin-like
YPDSF_2370	SSF116726	TrkA C-terminal domain-like
YPDSF_2371	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPDSF_2372	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPDSF_2373	SSF51569	Aldolase
YPDSF_2374	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_2376	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_2376	SSF69189	Penicillin-binding protein associated domain
YPDSF_2377	SSF161098	MetI-like
YPDSF_2378	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2378	SSF55021	ACT-like
YPDSF_2379	SSF53850	Periplasmic binding protein-like II
YPDSF_2380	SSF51197	Clavaminate synthase-like
YPDSF_2381	SSF56784	HAD-like
YPDSF_2382	SSF47616	GST C-terminal domain-like
YPDSF_2382	SSF52833	Thioredoxin-like
YPDSF_2383	SSF56935	Porins
YPDSF_2384	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2385	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_2386	SSF53807	"Helical backbone" metal receptor
YPDSF_2387	SSF143422	Transposase IS200-like
YPDSF_2389	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2389	SSF53850	Periplasmic binding protein-like II
YPDSF_2391	SSF51658	Xylose isomerase-like
YPDSF_2392	SSF141729	FimD N-terminal domain-like
YPDSF_2393	SSF49354	PapD-like
YPDSF_2393	SSF49584	Periplasmic chaperone C-domain
YPDSF_2396	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2397	SSF52794	PTS system IIB component-like
YPDSF_2398	SSF53613	Ribokinase-like
YPDSF_2399	SSF55594	HPr-like
YPDSF_2399	SSF55804	Phoshotransferase/anion transport protein
YPDSF_2400	SSF55811	Nudix
YPDSF_2402	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2403	SSF53822	Periplasmic binding protein-like I
YPDSF_2404	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_2404	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
YPDSF_2405	SSF53067	Actin-like ATPase domain
YPDSF_2406	SSF53720	ALDH-like
YPDSF_2407	SSF56529	FAH
YPDSF_2408	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2408	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YPDSF_2409	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2412	SSF50104	Translation proteins SH3-like domain
YPDSF_2412	SSF50249	Nucleic acid-binding proteins
YPDSF_2413	SSF51658	Xylose isomerase-like
YPDSF_2414	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_2414	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2415	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2415	SSF48008	GntR ligand-binding domain-like
YPDSF_2417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2418	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YPDSF_2419	SSF54001	Cysteine proteinases
YPDSF_2420	SSF141868	EAL domain-like
YPDSF_2421	SSF53850	Periplasmic binding protein-like II
YPDSF_2422	SSF161098	MetI-like
YPDSF_2423	SSF161098	MetI-like
YPDSF_2424	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2427	SSF103473	MFS general substrate transporter
YPDSF_2428	SSF55120	Pseudouridine synthase
YPDSF_2428	SSF55174	Alpha-L RNA-binding motif
YPDSF_2429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2429	SSF57829	Zn-binding ribosomal proteins
YPDSF_2430	SSF50715	Ribosomal protein L25-like
YPDSF_2431	SSF143422	Transposase IS200-like
YPDSF_2433	SSF158651	YejL-like
YPDSF_2434	SSF53649	Alkaline phosphatase-like
YPDSF_2436	SSF54060	His-Me finger endonucleases
YPDSF_2439	SSF51445	(Trans)glycosidases
YPDSF_2440	SSF46689	Homeodomain-like
YPDSF_2440	SSF53697	SIS domain
YPDSF_2441	SSF88874	Receptor-binding domain of short tail fibre protein gp12
YPDSF_2447	SSF69279	Phage tail proteins
YPDSF_2457	SSF51658	Xylose isomerase-like
YPDSF_2458	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_2458	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2459	SSF53639	AraD/HMP-PK domain-like
YPDSF_2460	SSF142764	YgbK-like
YPDSF_2462	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_2462	SSF51306	LexA/Signal peptidase
YPDSF_2464	SSF54857	DNA damage-inducible protein DinI
YPDSF_2465	SSF69917	OMPT-like
YPDSF_2466	SSF103190	Sensory domain-like
YPDSF_2466	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
YPDSF_2467	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_2468	SSF103473	MFS general substrate transporter
YPDSF_2469	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_2470	SSF56935	Porins
YPDSF_2473	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2474	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPDSF_2475	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2475	SSF52172	CheY-like
YPDSF_2476	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_2476	SSF52172	CheY-like
YPDSF_2476	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2477	SSF101904	GyrA/ParC C-terminal domain-like
YPDSF_2477	SSF56719	Type II DNA topoisomerase
YPDSF_2478	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2479	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YPDSF_2479	SSF51998	PFL-like glycyl radical enzymes
YPDSF_2480	SSF47240	Ferritin-like
YPDSF_2481	SSF54292	2Fe-2S ferredoxin-like
YPDSF_2482	SSF49772	Ecotin, trypsin inhibitor
YPDSF_2483	SSF53218	Molybdenum cofactor biosynthesis proteins
YPDSF_2485	SSF56925	OMPA-like
YPDSF_2486	SSF56634	Heme-dependent catalase-like
YPDSF_2487	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2488	SSF56935	Porins
YPDSF_2490	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_2492	SSF53383	PLP-dependent transferases
YPDSF_2492	SSF55904	Ornithine decarboxylase C-terminal domain
YPDSF_2494	SSF53383	PLP-dependent transferases
YPDSF_2497	SSF161098	MetI-like
YPDSF_2498	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2498	SSF54631	CBS-domain pair
YPDSF_2499	SSF161098	MetI-like
YPDSF_2500	SSF53850	Periplasmic binding protein-like II
YPDSF_2501	SSF52821	Rhodanese/Cell cycle control phosphatase
YPDSF_2502	SSF53383	PLP-dependent transferases
YPDSF_2504	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2507	SSF48371	ARM repeat
YPDSF_2508	SSF53822	Periplasmic binding protein-like I
YPDSF_2510	SSF161098	MetI-like
YPDSF_2511	SSF161098	MetI-like
YPDSF_2512	SSF53850	Periplasmic binding protein-like II
YPDSF_2513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2518	SSF55154	CYTH-like phosphatases
YPDSF_2519	SSF55103	FAD-linked oxidases, C-terminal domain
YPDSF_2519	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_2520	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_2522	SSF51395	FMN-linked oxidoreductases
YPDSF_2524	SSF143422	Transposase IS200-like
YPDSF_2525	SSF103473	MFS general substrate transporter
YPDSF_2526	SSF53167	Purine and uridine phosphorylases
YPDSF_2527	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_2528	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2528	SSF53850	Periplasmic binding protein-like II
YPDSF_2530	SSF46689	Homeodomain-like
YPDSF_2530	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPDSF_2531	SSF53720	ALDH-like
YPDSF_2532	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2532	SSF54373	FAD-linked reductases, C-terminal domain
YPDSF_2533	SSF143422	Transposase IS200-like
YPDSF_2535	SSF54690	Molybdopterin synthase subunit MoaE
YPDSF_2536	SSF54285	MoaD/ThiS
YPDSF_2537	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
YPDSF_2538	SSF102114	Radical SAM enzymes
YPDSF_2539	SSF142338	CofD-like
YPDSF_2541	SSF46600	C-terminal UvrC-binding domain of UvrB
YPDSF_2541	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2542	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2543	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2544	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2545	SSF53383	PLP-dependent transferases
YPDSF_2546	SSF102114	Radical SAM enzymes
YPDSF_2547	SSF53383	PLP-dependent transferases
YPDSF_2548	SSF50974	Nitrous oxide reductase, N-terminal domain
YPDSF_2549	SSF56784	HAD-like
YPDSF_2550	SSF50331	MOP-like
YPDSF_2550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2551	SSF161098	MetI-like
YPDSF_2552	SSF53850	Periplasmic binding protein-like II
YPDSF_2554	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2554	SSF50331	MOP-like
YPDSF_2555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2558	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2559	SSF54197	HIT-like
YPDSF_2560	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_2560	SSF55060	GHMP Kinase, C-terminal domain
YPDSF_2562	SSF74650	Galactose mutarotase-like
YPDSF_2564	SSF53254	Phosphoglycerate mutase-like
YPDSF_2567	SSF160240	Cation efflux protein cytoplasmic domain-like
YPDSF_2567	SSF161111	Cation efflux protein transmembrane domain-like
YPDSF_2569	SSF142754	NadA-like
YPDSF_2570	SSF48452	TPR-like
YPDSF_2571	SSF103088	OmpA-like
YPDSF_2572	SSF52964	TolB, N-terminal domain
YPDSF_2572	SSF69304	Tricorn protease N-terminal domain
YPDSF_2573	SSF74653	TolA/TonB C-terminal domain
YPDSF_2576	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_2580	SSF143422	Transposase IS200-like
YPDSF_2581	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2581	SSF52210	Succinyl-CoA synthetase domains
YPDSF_2582	SSF52210	Succinyl-CoA synthetase domains
YPDSF_2582	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_2583	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YPDSF_2583	SSF51230	Single hybrid motif
YPDSF_2583	SSF52777	CoA-dependent acyltransferases
YPDSF_2584	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_2585	SSF46548	alpha-helical ferredoxin
YPDSF_2585	SSF54292	2Fe-2S ferredoxin-like
YPDSF_2586	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YPDSF_2586	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2586	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YPDSF_2587	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YPDSF_2588	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YPDSF_2589	SSF48256	Citrate synthase
YPDSF_2590	SSF51064	Head domain of nucleotide exchange factor GrpE
YPDSF_2590	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
YPDSF_2591	SSF111331	NAD kinase/diacylglycerol kinase-like
YPDSF_2592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2594	SSF54285	MoaD/ThiS
YPDSF_2595	SSF55961	Bet v1-like
YPDSF_2596	SSF74982	Small protein B (SmpB)
YPDSF_2597	SSF143422	Transposase IS200-like
YPDSF_2598	SSF56349	DNA breaking-rejoining enzymes
YPDSF_2603	SSF56349	DNA breaking-rejoining enzymes
YPDSF_2606	SSF57783	Zinc beta-ribbon
YPDSF_2607	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2608	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_2611	SSF46689	Homeodomain-like
YPDSF_2611	SSF53098	Ribonuclease H-like
YPDSF_2612	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2614	SSF46689	Homeodomain-like
YPDSF_2616	SSF53474	alpha/beta-Hydrolases
YPDSF_2619	SSF52218	Flavoproteins
YPDSF_2620	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2621	SSF51445	(Trans)glycosidases
YPDSF_2621	SSF55545	beta-N-acetylhexosaminidase-like domain
YPDSF_2621	SSF81296	E set domains
YPDSF_2622	SSF49384	Carbohydrate-binding domain
YPDSF_2624	SSF50715	Ribosomal protein L25-like
YPDSF_2624	SSF52374	Nucleotidylyl transferase
YPDSF_2625	SSF51261	Duplicated hybrid motif
YPDSF_2625	SSF55604	Glucose permease domain IIB
YPDSF_2626	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_2627	SSF51338	Composite domain of metallo-dependent hydrolases
YPDSF_2627	SSF51556	Metallo-dependent hydrolases
YPDSF_2628	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2628	SSF53067	Actin-like ATPase domain
YPDSF_2629	SSF56784	HAD-like
YPDSF_2630	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2630	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_2631	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2632	SSF102114	Radical SAM enzymes
YPDSF_2633	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2634	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPDSF_2636	SSF54631	CBS-domain pair
YPDSF_2636	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_2637	SSF56317	Carbon-nitrogen hydrolase
YPDSF_2638	SSF53850	Periplasmic binding protein-like II
YPDSF_2639	SSF161098	MetI-like
YPDSF_2640	SSF161098	MetI-like
YPDSF_2641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2643	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPDSF_2643	SSF50677	ValRS/IleRS/LeuRS editing domain
YPDSF_2643	SSF52374	Nucleotidylyl transferase
YPDSF_2645	SSF48019	post-AAA+ oligomerization domain-like
YPDSF_2645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2646	SSF52374	Nucleotidylyl transferase
YPDSF_2647	SSF81301	Nucleotidyltransferase
YPDSF_2648	SSF75217	alpha/beta knot
YPDSF_2649	SSF56519	Penicillin binding protein dimerisation domain
YPDSF_2649	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_2651	SSF110997	Sporulation related repeat
YPDSF_2651	SSF50685	Barwin-like endoglucanases
YPDSF_2652	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_2652	SSF69189	Penicillin-binding protein associated domain
YPDSF_2653	SSF117991	YbeD/HP0495-like
YPDSF_2654	SSF55681	Class II aaRS and biotin synthetases
YPDSF_2655	SSF102114	Radical SAM enzymes
YPDSF_2659	SSF50249	Nucleic acid-binding proteins
YPDSF_2660	SSF50249	Nucleic acid-binding proteins
YPDSF_2661	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2664	SSF46575	DNA polymerase III theta subunit-like
YPDSF_2665	SSF54909	Dimeric alpha+beta barrel
YPDSF_2666	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2666	SSF90123	ABC transporter transmembrane region
YPDSF_2667	SSF51182	RmlC-like cupins
YPDSF_2668	SSF51658	Xylose isomerase-like
YPDSF_2669	SSF53613	Ribokinase-like
YPDSF_2670	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2670	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_2672	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2673	SSF53822	Periplasmic binding protein-like I
YPDSF_2674	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_2675	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2676	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_2677	SSF52467	DHS-like NAD/FAD-binding domain
YPDSF_2677	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_2677	SSF53720	ALDH-like
YPDSF_2678	SSF46689	Homeodomain-like
YPDSF_2678	SSF53697	SIS domain
YPDSF_2679	SSF48239	Terpenoid cyclases/Protein prenyltransferases
YPDSF_2680	SSF53955	Lysozyme-like
YPDSF_2680	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_2681	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_2684	SSF141452	Hcp1-like
YPDSF_2686	SSF103515	Autotransporter
YPDSF_2686	SSF51126	Pectin lyase-like
YPDSF_2692	SSF51445	(Trans)glycosidases
YPDSF_2692	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
YPDSF_2695	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_2696	SSF51430	NAD(P)-linked oxidoreductase
YPDSF_2697	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2697	SSF53850	Periplasmic binding protein-like II
YPDSF_2698	SSF46689	Homeodomain-like
YPDSF_2698	SSF53098	Ribonuclease H-like
YPDSF_2699	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2701	SSF52799	(Phosphotyrosine protein) phosphatases II
YPDSF_2702	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2702	SSF53474	alpha/beta-Hydrolases
YPDSF_2703	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPDSF_2708	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2708	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPDSF_2709	SSF55174	Alpha-L RNA-binding motif
YPDSF_2710	SSF143422	Transposase IS200-like
YPDSF_2711	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPDSF_2711	SSF52374	Nucleotidylyl transferase
YPDSF_2712	SSF50891	Cyclophilin-like
YPDSF_2713	SSF56300	Metallo-dependent phosphatases
YPDSF_2714	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
YPDSF_2715	SSF51246	Rudiment single hybrid motif
YPDSF_2715	SSF52440	PreATP-grasp domain
YPDSF_2715	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_2717	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2718	SSF52266	SGNH hydrolase
YPDSF_2719	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2720	SSF48452	TPR-like
YPDSF_2720	SSF52833	Thioredoxin-like
YPDSF_2721	SSF117892	Band 7/SPFH domain
YPDSF_2722	SSF141322	NfeD domain-like
YPDSF_2723	SSF46955	Putative DNA-binding domain
YPDSF_2724	SSF55008	HMA, heavy metal-associated domain
YPDSF_2724	SSF56784	HAD-like
YPDSF_2724	SSF81653	Calcium ATPase, transduction domain A
YPDSF_2724	SSF81665	Calcium ATPase, transmembrane domain M
YPDSF_2726	SSF55826	YbaK/ProRS associated domain
YPDSF_2728	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YPDSF_2729	SSF56300	Metallo-dependent phosphatases
YPDSF_2730	SSF56300	Metallo-dependent phosphatases
YPDSF_2733	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2734	SSF53613	Ribokinase-like
YPDSF_2735	SSF160355	Bacterial polysaccharide co-polymerase-like
YPDSF_2736	SSF53738	Phosphoglucomutase, first 3 domains
YPDSF_2736	SSF55957	Phosphoglucomutase, C-terminal domain
YPDSF_2737	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_2738	SSF51182	RmlC-like cupins
YPDSF_2738	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_2739	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2740	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2741	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2742	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_2744	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_2745	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_2747	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2748	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2749	SSF53383	PLP-dependent transferases
YPDSF_2750	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2751	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_2752	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_2752	SSF54292	2Fe-2S ferredoxin-like
YPDSF_2752	SSF63380	Riboflavin synthase domain-like
YPDSF_2753	SSF53800	Chelatase
YPDSF_2754	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2755	SSF110942	HSP90 C-terminal domain
YPDSF_2755	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_2755	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2757	SSF111304	Recombination protein RecR
YPDSF_2758	SSF82607	YbaB-like
YPDSF_2759	SSF48019	post-AAA+ oligomerization domain-like
YPDSF_2759	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2760	SSF53271	PRTase-like
YPDSF_2764	SSF50182	Sm-like ribonucleoproteins
YPDSF_2764	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YPDSF_2764	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YPDSF_2765	SSF75169	DsrEFH-like
YPDSF_2766	SSF46689	Homeodomain-like
YPDSF_2766	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPDSF_2767	SSF111369	HlyD-like secretion proteins
YPDSF_2768	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPDSF_2768	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPDSF_2768	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPDSF_2769	SSF143800	L28p-like
YPDSF_2770	SSF57840	Ribosomal protein L36
YPDSF_2773	SSF68989	Hemolysin expression modulating protein HHA
YPDSF_2774	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YPDSF_2776	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_2777	SSF111352	Ammonium transporter
YPDSF_2778	SSF54913	GlnB-like
YPDSF_2779	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2779	SSF90123	ABC transporter transmembrane region
YPDSF_2780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2780	SSF90123	ABC transporter transmembrane region
YPDSF_2781	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2781	SSF54909	Dimeric alpha+beta barrel
YPDSF_2782	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_2783	SSF56784	HAD-like
YPDSF_2784	SSF53850	Periplasmic binding protein-like II
YPDSF_2785	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2786	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_2787	SSF47781	RuvA domain 2-like
YPDSF_2788	SSF109998	Triger factor/SurA peptide-binding domain-like
YPDSF_2788	SSF54534	FKBP-like
YPDSF_2789	SSF143422	Transposase IS200-like
YPDSF_2790	SSF47729	IHF-like DNA-binding proteins
YPDSF_2791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2791	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_2791	SSF88697	PUA domain-like
YPDSF_2792	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2792	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPDSF_2793	SSF52096	ClpP/crotonase
YPDSF_2794	SSF102735	Trigger factor ribosome-binding domain
YPDSF_2794	SSF109998	Triger factor/SurA peptide-binding domain-like
YPDSF_2794	SSF54534	FKBP-like
YPDSF_2795	SSF82657	BolA-like
YPDSF_2797	SSF103473	MFS general substrate transporter
YPDSF_2798	SSF111364	Tsx-like channel
YPDSF_2799	SSF49503	Cupredoxins
YPDSF_2799	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
YPDSF_2800	SSF81442	Cytochrome c oxidase subunit I-like
YPDSF_2801	SSF81452	Cytochrome c oxidase subunit III-like
YPDSF_2804	SSF103473	MFS general substrate transporter
YPDSF_2805	SSF89963	YajQ-like
YPDSF_2806	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_2806	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2807	SSF52317	Class I glutamine amidotransferase-like
YPDSF_2808	SSF143437	THUMP domain-like
YPDSF_2808	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2808	SSF52821	Rhodanese/Cell cycle control phosphatase
YPDSF_2810	SSF116842	XseB-like
YPDSF_2811	SSF48576	Terpenoid synthases
YPDSF_2812	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_2812	SSF52922	TK C-terminal domain-like
YPDSF_2813	SSF143422	Transposase IS200-like
YPDSF_2814	SSF101307	YutG-like
YPDSF_2815	SSF55326	PurM N-terminal domain-like
YPDSF_2815	SSF56042	PurM C-terminal domain-like
YPDSF_2816	SSF48013	NusB-like
YPDSF_2817	SSF52121	Lumazine synthase
YPDSF_2818	SSF53597	Dihydrofolate reductase-like
YPDSF_2818	SSF53927	Cytidine deaminase-like
YPDSF_2822	SSF143422	Transposase IS200-like
YPDSF_2823	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPDSF_2824	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPDSF_2826	SSF51713	tRNA-guanine transglycosylase
YPDSF_2827	SSF111337	QueA-like
YPDSF_2829	SSF52833	Thioredoxin-like
YPDSF_2830	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_2831	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_2832	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2833	SSF51011	Glycosyl hydrolase domain
YPDSF_2833	SSF51445	(Trans)glycosidases
YPDSF_2833	SSF81296	E set domains
YPDSF_2836	SSF53850	Periplasmic binding protein-like II
YPDSF_2837	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_2837	SSF55785	PYP-like sensor domain (PAS domain)
YPDSF_2837	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2838	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_2838	SSF52172	CheY-like
YPDSF_2839	SSF56300	Metallo-dependent phosphatases
YPDSF_2840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2841	SSF53067	Actin-like ATPase domain
YPDSF_2843	SSF51182	RmlC-like cupins
YPDSF_2844	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2845	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2846	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2850	SSF53720	ALDH-like
YPDSF_2851	SSF53633	Carbamate kinase-like
YPDSF_2851	SSF88697	PUA domain-like
YPDSF_2853	SSF53474	alpha/beta-Hydrolases
YPDSF_2854	SSF53271	PRTase-like
YPDSF_2855	SSF49299	PKD domain
YPDSF_2855	SSF81296	E set domains
YPDSF_2856	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2856	SSF53850	Periplasmic binding protein-like II
YPDSF_2857	SSF53187	Zn-dependent exopeptidases
YPDSF_2858	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
YPDSF_2858	SSF56672	DNA/RNA polymerases
YPDSF_2859	SSF51695	PLC-like phosphodiesterases
YPDSF_2861	SSF143631	ApbE-like
YPDSF_2862	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_2862	SSF54292	2Fe-2S ferredoxin-like
YPDSF_2862	SSF63380	Riboflavin synthase domain-like
YPDSF_2869	SSF141523	L,D-transpeptidase catalytic domain-like
YPDSF_2870	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_2871	SSF53697	SIS domain
YPDSF_2872	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YPDSF_2872	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YPDSF_2873	SSF143422	Transposase IS200-like
YPDSF_2876	SSF51126	Pectin lyase-like
YPDSF_2878	SSF56112	Protein kinase-like (PK-like)
YPDSF_2879	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_2880	SSF51182	RmlC-like cupins
YPDSF_2881	SSF56784	HAD-like
YPDSF_2882	SSF53639	AraD/HMP-PK domain-like
YPDSF_2883	SSF53383	PLP-dependent transferases
YPDSF_2884	SSF56317	Carbon-nitrogen hydrolase
YPDSF_2885	SSF53187	Zn-dependent exopeptidases
YPDSF_2885	SSF55031	Bacterial exopeptidase dimerisation domain
YPDSF_2886	SSF53383	PLP-dependent transferases
YPDSF_2887	SSF46689	Homeodomain-like
YPDSF_2887	SSF53098	Ribonuclease H-like
YPDSF_2888	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2889	SSF53383	PLP-dependent transferases
YPDSF_2890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2891	SSF161098	MetI-like
YPDSF_2892	SSF161098	MetI-like
YPDSF_2893	SSF53850	Periplasmic binding protein-like II
YPDSF_2894	SSF46689	Homeodomain-like
YPDSF_2894	SSF53697	SIS domain
YPDSF_2897	SSF75304	Amidase signature (AS) enzymes
YPDSF_2898	SSF54427	NTF2-like
YPDSF_2899	SSF103473	MFS general substrate transporter
YPDSF_2902	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2903	SSF111369	HlyD-like secretion proteins
YPDSF_2904	SSF103473	MFS general substrate transporter
YPDSF_2905	SSF55315	L30e-like
YPDSF_2905	SSF75217	alpha/beta knot
YPDSF_2906	SSF52833	Thioredoxin-like
YPDSF_2908	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2908	SSF52210	Succinyl-CoA synthetase domains
YPDSF_2908	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_2908	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_2909	SSF56024	Phospholipase D/nuclease
YPDSF_2911	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2911	SSF81923	Double Clp-N motif
YPDSF_2912	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
YPDSF_2913	SSF55120	Pseudouridine synthase
YPDSF_2913	SSF55174	Alpha-L RNA-binding motif
YPDSF_2914	SSF48452	TPR-like
YPDSF_2915	SSF69754	Ribosome binding protein Y (YfiA homologue)
YPDSF_2916	SSF143422	Transposase IS200-like
YPDSF_2917	SSF48600	Chorismate mutase II
YPDSF_2917	SSF53850	Periplasmic binding protein-like II
YPDSF_2917	SSF55021	ACT-like
YPDSF_2918	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_2918	SSF48600	Chorismate mutase II
YPDSF_2918	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2919	SSF51569	Aldolase
YPDSF_2920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2921	SSF46689	Homeodomain-like
YPDSF_2921	SSF53098	Ribonuclease H-like
YPDSF_2922	SSF143422	Transposase IS200-like
YPDSF_2923	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPDSF_2924	SSF160950	YacF-like
YPDSF_2925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2926	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YPDSF_2928	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2929	SSF54523	Pili subunits
YPDSF_2930	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YPDSF_2930	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YPDSF_2931	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
YPDSF_2934	SSF46785	"Winged helix" DNA-binding domain
YPDSF_2934	SSF48008	GntR ligand-binding domain-like
YPDSF_2935	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_2935	SSF52922	TK C-terminal domain-like
YPDSF_2936	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YPDSF_2936	SSF51230	Single hybrid motif
YPDSF_2936	SSF52777	CoA-dependent acyltransferases
YPDSF_2938	SSF51905	FAD/NAD(P)-binding domain
YPDSF_2938	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPDSF_2939	SSF143422	Transposase IS200-like
YPDSF_2940	SSF52016	LeuD/IlvD-like
YPDSF_2940	SSF53732	Aconitase iron-sulfur domain
YPDSF_2940	SSF74778	Aconitase B, N-terminal domain
YPDSF_2942	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_2943	SSF56276	S-adenosylmethionine decarboxylase
YPDSF_2944	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_2946	SSF49503	Cupredoxins
YPDSF_2947	SSF53271	PRTase-like
YPDSF_2948	SSF53056	beta-carbonic anhydrase, cab
YPDSF_2949	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2952	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_2953	SSF50692	ADC-like
YPDSF_2954	SSF52374	Nucleotidylyl transferase
YPDSF_2955	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_2956	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
YPDSF_2957	SSF81301	Nucleotidyltransferase
YPDSF_2957	SSF81891	Poly A polymerase C-terminal region-like
YPDSF_2958	SSF52374	Nucleotidylyl transferase
YPDSF_2959	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
YPDSF_2959	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPDSF_2961	SSF55144	LigT-like
YPDSF_2962	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2963	SSF53955	Lysozyme-like
YPDSF_2963	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_2966	SSF53807	"Helical backbone" metal receptor
YPDSF_2967	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_2968	SSF53383	PLP-dependent transferases
YPDSF_2969	SSF81340	Clc chloride channel
YPDSF_2970	SSF89360	HesB-like domain
YPDSF_2973	SSF53807	"Helical backbone" metal receptor
YPDSF_2974	SSF53167	Purine and uridine phosphorylases
YPDSF_2975	SSF109604	HD-domain/PDEase-like
YPDSF_2976	SSF50156	PDZ domain-like
YPDSF_2976	SSF50494	Trypsin-like serine proteases
YPDSF_2977	SSF158472	HAMP domain-like
YPDSF_2977	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPDSF_2977	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_2977	SSF52172	CheY-like
YPDSF_2977	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_2980	SSF109604	HD-domain/PDEase-like
YPDSF_2980	SSF55021	ACT-like
YPDSF_2980	SSF81271	TGS-like
YPDSF_2980	SSF81301	Nucleotidyltransferase
YPDSF_2981	SSF101386	all-alpha NTP pyrophosphatases
YPDSF_2982	SSF52317	Class I glutamine amidotransferase-like
YPDSF_2982	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2983	SSF51604	Enolase C-terminal domain-like
YPDSF_2983	SSF54826	Enolase N-terminal domain-like
YPDSF_2984	SSF49329	Cu,Zn superoxide dismutase-like
YPDSF_2985	SSF102114	Radical SAM enzymes
YPDSF_2986	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YPDSF_2987	SSF52218	Flavoproteins
YPDSF_2987	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_2987	SSF63380	Riboflavin synthase domain-like
YPDSF_2988	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
YPDSF_2988	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
YPDSF_2989	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2990	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2991	SSF143100	TTHA1013/TTHA0281-like
YPDSF_2992	SSF54786	YcfA/nrd intein domain
YPDSF_2993	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_2993	SSF53790	Tetrapyrrole methylase
YPDSF_2993	SSF75615	Siroheme synthase middle domains-like
YPDSF_2994	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_2995	SSF50447	Translation proteins
YPDSF_2995	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPDSF_2995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2996	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_2999	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_3000	SSF69765	IpsF-like
YPDSF_3001	SSF55120	Pseudouridine synthase
YPDSF_3002	SSF64167	SurE-like
YPDSF_3003	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3004	SSF51261	Duplicated hybrid motif
YPDSF_3005	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPDSF_3005	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPDSF_3006	SSF48334	DNA repair protein MutS, domain III
YPDSF_3006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3006	SSF53150	DNA repair protein MutS, domain II
YPDSF_3006	SSF55271	DNA repair protein MutS, domain I
YPDSF_3008	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YPDSF_3009	SSF50129	GroES-like
YPDSF_3009	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3010	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3011	SSF82549	DAK1/DegV-like
YPDSF_3012	SSF101473	DhaL-like
YPDSF_3013	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_3015	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3017	SSF53850	Periplasmic binding protein-like II
YPDSF_3018	SSF46626	Cytochrome c
YPDSF_3020	SSF56935	Porins
YPDSF_3022	SSF51161	Trimeric LpxA-like enzymes
YPDSF_3026	SSF117457	FumA C-terminal domain-like
YPDSF_3027	SSF53067	Actin-like ATPase domain
YPDSF_3028	SSF51658	Xylose isomerase-like
YPDSF_3031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3032	SSF53822	Periplasmic binding protein-like I
YPDSF_3033	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_3033	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3034	SSF53639	AraD/HMP-PK domain-like
YPDSF_3035	SSF50692	ADC-like
YPDSF_3035	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_3036	SSF54862	4Fe-4S ferredoxins
YPDSF_3038	SSF89155	TorD-like
YPDSF_3039	SSF81342	Transmembrane di-heme cytochromes
YPDSF_3040	SSF47175	Cytochromes
YPDSF_3041	SSF48113	Heme-dependent peroxidases
YPDSF_3042	SSF53822	Periplasmic binding protein-like I
YPDSF_3043	SSF141318	TM0957-like
YPDSF_3044	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3046	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_3047	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_3047	SSF52922	TK C-terminal domain-like
YPDSF_3048	SSF53067	Actin-like ATPase domain
YPDSF_3049	SSF53743	FucI/AraA N-terminal and middle domains
YPDSF_3051	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_3051	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3052	SSF103473	MFS general substrate transporter
YPDSF_3053	SSF142433	CinA-like
YPDSF_3054	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3054	SSF54752	RecA protein, C-terminal domain
YPDSF_3056	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
YPDSF_3056	SSF50447	Translation proteins
YPDSF_3056	SSF55186	ThrRS/AlaRS common domain
YPDSF_3056	SSF55681	Class II aaRS and biotin synthetases
YPDSF_3057	SSF117130	CsrA-like
YPDSF_3058	SSF56784	HAD-like
YPDSF_3060	SSF55931	Glutamine synthetase/guanido kinase
YPDSF_3061	SSF63411	LuxS/MPP-like metallohydrolase
YPDSF_3062	SSF54631	CBS-domain pair
YPDSF_3062	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_3064	SSF47446	Signal peptide-binding domain
YPDSF_3064	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3066	SSF54565	Ribosomal protein S16
YPDSF_3067	SSF50346	PRC-barrel domain
YPDSF_3067	SSF50447	Translation proteins
YPDSF_3068	SSF75217	alpha/beta knot
YPDSF_3069	SSF50104	Translation proteins SH3-like domain
YPDSF_3073	SSF52172	CheY-like
YPDSF_3074	SSF51569	Aldolase
YPDSF_3075	SSF46689	Homeodomain-like
YPDSF_3075	SSF53098	Ribonuclease H-like
YPDSF_3076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3077	SSF55811	Nudix
YPDSF_3078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3078	SSF81767	Pre-protein crosslinking domain of SecA
YPDSF_3078	SSF81886	Helical scaffold and wing domains of SecA
YPDSF_3081	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3082	SSF52490	Tubulin nucleotide-binding domain-like
YPDSF_3082	SSF55307	Tubulin C-terminal domain-like
YPDSF_3083	SSF53067	Actin-like ATPase domain
YPDSF_3085	SSF52440	PreATP-grasp domain
YPDSF_3085	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_3086	SSF51984	MurCD N-terminal domain
YPDSF_3086	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPDSF_3086	SSF53623	MurD-like peptide ligases, catalytic domain
YPDSF_3087	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3089	SSF51984	MurCD N-terminal domain
YPDSF_3089	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPDSF_3089	SSF53623	MurD-like peptide ligases, catalytic domain
YPDSF_3091	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPDSF_3091	SSF53623	MurD-like peptide ligases, catalytic domain
YPDSF_3091	SSF63418	MurE/MurF N-terminal domain
YPDSF_3092	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPDSF_3092	SSF53623	MurD-like peptide ligases, catalytic domain
YPDSF_3092	SSF63418	MurE/MurF N-terminal domain
YPDSF_3093	SSF56519	Penicillin binding protein dimerisation domain
YPDSF_3093	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_3095	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3095	SSF81799	Putative methyltransferase TM0872, insert domain
YPDSF_3096	SSF89447	AbrB/MazE/MraZ-like
YPDSF_3098	SSF143422	Transposase IS200-like
YPDSF_3099	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_3099	SSF53822	Periplasmic binding protein-like I
YPDSF_3100	SSF143422	Transposase IS200-like
YPDSF_3101	SSF55021	ACT-like
YPDSF_3102	SSF52467	DHS-like NAD/FAD-binding domain
YPDSF_3102	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_3104	SSF56801	Acetyl-CoA synthetase-like
YPDSF_3105	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3105	SSF53850	Periplasmic binding protein-like II
YPDSF_3106	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YPDSF_3106	SSF51569	Aldolase
YPDSF_3107	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPDSF_3108	SSF53732	Aconitase iron-sulfur domain
YPDSF_3109	SSF52016	LeuD/IlvD-like
YPDSF_3110	SSF103473	MFS general substrate transporter
YPDSF_3111	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3111	SSF53850	Periplasmic binding protein-like II
YPDSF_3112	SSF53850	Periplasmic binding protein-like II
YPDSF_3113	SSF161098	MetI-like
YPDSF_3114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3116	SSF53098	Ribonuclease H-like
YPDSF_3116	SSF56672	DNA/RNA polymerases
YPDSF_3117	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3119	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3120	SSF103088	OmpA-like
YPDSF_3125	SSF141571	Pentapeptide repeat-like
YPDSF_3126	SSF141571	Pentapeptide repeat-like
YPDSF_3127	SSF69255	gp5 N-terminal domain-like
YPDSF_3127	SSF69279	Phage tail proteins
YPDSF_3127	SSF69349	Phage fibre proteins
YPDSF_3128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3128	SSF81923	Double Clp-N motif
YPDSF_3132	SSF141452	Hcp1-like
YPDSF_3137	SSF55120	Pseudouridine synthase
YPDSF_3138	SSF46565	Chaperone J-domain
YPDSF_3140	SSF109998	Triger factor/SurA peptide-binding domain-like
YPDSF_3140	SSF54534	FKBP-like
YPDSF_3141	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YPDSF_3142	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3143	SSF110069	ApaG-like
YPDSF_3144	SSF56300	Metallo-dependent phosphatases
YPDSF_3147	SSF53597	Dihydrofolate reductase-like
YPDSF_3151	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
YPDSF_3151	SSF52335	Methylglyoxal synthase-like
YPDSF_3151	SSF52440	PreATP-grasp domain
YPDSF_3151	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_3152	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
YPDSF_3152	SSF52317	Class I glutamine amidotransferase-like
YPDSF_3153	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3153	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_3155	SSF54534	FKBP-like
YPDSF_3157	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPDSF_3157	SSF50677	ValRS/IleRS/LeuRS editing domain
YPDSF_3157	SSF52374	Nucleotidylyl transferase
YPDSF_3158	SSF52374	Nucleotidylyl transferase
YPDSF_3158	SSF82114	Riboflavin kinase-like
YPDSF_3159	SSF46992	Ribosomal protein S20
YPDSF_3160	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3160	SSF53850	Periplasmic binding protein-like II
YPDSF_3162	SSF46565	Chaperone J-domain
YPDSF_3162	SSF49493	HSP40/DnaJ peptide-binding domain
YPDSF_3162	SSF57938	DnaJ/Hsp40 cysteine-rich domain
YPDSF_3163	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YPDSF_3163	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YPDSF_3163	SSF53067	Actin-like ATPase domain
YPDSF_3165	SSF49695	gamma-Crystallin-like
YPDSF_3165	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3166	SSF103473	MFS general substrate transporter
YPDSF_3167	SSF53218	Molybdenum cofactor biosynthesis proteins
YPDSF_3169	SSF51569	Aldolase
YPDSF_3172	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_3173	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3173	SSF55060	GHMP Kinase, C-terminal domain
YPDSF_3174	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3174	SSF53633	Carbamate kinase-like
YPDSF_3174	SSF55021	ACT-like
YPDSF_3174	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_3176	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_3176	SSF52172	CheY-like
YPDSF_3178	SSF46689	Homeodomain-like
YPDSF_3178	SSF55136	Probable bacterial effector-binding domain
YPDSF_3179	SSF53254	Phosphoglycerate mutase-like
YPDSF_3180	SSF52972	ITPase-like
YPDSF_3181	SSF48295	TrpR-like
YPDSF_3182	SSF48435	Bacterial muramidases
YPDSF_3182	SSF53955	Lysozyme-like
YPDSF_3183	SSF56784	HAD-like
YPDSF_3183	SSF81653	Calcium ATPase, transduction domain A
YPDSF_3183	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
YPDSF_3183	SSF81665	Calcium ATPase, transmembrane domain M
YPDSF_3185	SSF55073	Nucleotide cyclase
YPDSF_3186	SSF103088	OmpA-like
YPDSF_3187	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3188	SSF140931	Fic-like
YPDSF_3188	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3189	SSF140931	Fic-like
YPDSF_3190	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_3190	SSF52374	Nucleotidylyl transferase
YPDSF_3190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3191	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3191	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3192	SSF56784	HAD-like
YPDSF_3194	SSF53167	Purine and uridine phosphorylases
YPDSF_3195	SSF143856	DeoB insert domain-like
YPDSF_3195	SSF53649	Alkaline phosphatase-like
YPDSF_3196	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YPDSF_3196	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YPDSF_3196	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
YPDSF_3197	SSF51569	Aldolase
YPDSF_3199	SSF51556	Metallo-dependent hydrolases
YPDSF_3200	SSF52151	FabD/lysophospholipase-like
YPDSF_3203	SSF50447	Translation proteins
YPDSF_3203	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3203	SSF54980	EF-G C-terminal domain-like
YPDSF_3204	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3205	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3207	SSF55073	Nucleotide cyclase
YPDSF_3208	SSF51126	Pectin lyase-like
YPDSF_3211	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPDSF_3211	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPDSF_3211	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPDSF_3212	SSF111369	HlyD-like secretion proteins
YPDSF_3215	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3216	SSF53067	Actin-like ATPase domain
YPDSF_3217	SSF100950	NagB/RpiA/CoA transferase-like
YPDSF_3219	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3222	SSF53822	Periplasmic binding protein-like I
YPDSF_3223	SSF51569	Aldolase
YPDSF_3224	SSF54909	Dimeric alpha+beta barrel
YPDSF_3226	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YPDSF_3226	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_3226	SSF52009	Phosphohistidine domain
YPDSF_3226	SSF55594	HPr-like
YPDSF_3226	SSF55804	Phoshotransferase/anion transport protein
YPDSF_3228	SSF52794	PTS system IIB component-like
YPDSF_3229	SSF52794	PTS system IIB component-like
YPDSF_3230	SSF46689	Homeodomain-like
YPDSF_3239	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3240	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3241	SSF46689	Homeodomain-like
YPDSF_3243	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3244	SSF46689	Homeodomain-like
YPDSF_3244	SSF53098	Ribonuclease H-like
YPDSF_3245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3246	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3248	SSF56349	DNA breaking-rejoining enzymes
YPDSF_3251	SSF52949	Macro domain-like
YPDSF_3251	SSF53187	Zn-dependent exopeptidases
YPDSF_3252	SSF102400	DNA polymerase III chi subunit
YPDSF_3253	SSF46589	tRNA-binding arm
YPDSF_3253	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YPDSF_3253	SSF50677	ValRS/IleRS/LeuRS editing domain
YPDSF_3253	SSF52374	Nucleotidylyl transferase
YPDSF_3254	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3255	SSF89946	Hypothetical protein VC0424
YPDSF_3256	SSF53671	Aspartate/ornithine carbamoyltransferase
YPDSF_3257	SSF51197	Clavaminate synthase-like
YPDSF_3258	SSF53850	Periplasmic binding protein-like II
YPDSF_3259	SSF53850	Periplasmic binding protein-like II
YPDSF_3260	SSF161098	MetI-like
YPDSF_3261	SSF161098	MetI-like
YPDSF_3262	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3263	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3264	SSF51998	PFL-like glycyl radical enzymes
YPDSF_3265	SSF102114	Radical SAM enzymes
YPDSF_3266	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3266	SSF64288	Chorismate lyase-like
YPDSF_3268	SSF159709	PhnH-like
YPDSF_3271	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3272	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3273	SSF51338	Composite domain of metallo-dependent hydrolases
YPDSF_3273	SSF51556	Metallo-dependent hydrolases
YPDSF_3274	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3275	SSF56281	Metallo-hydrolase/oxidoreductase
YPDSF_3276	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3277	SSF50475	FMN-binding split barrel
YPDSF_3278	SSF48230	Chondroitin AC/alginate lyase
YPDSF_3279	SSF50331	MOP-like
YPDSF_3279	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3280	SSF161098	MetI-like
YPDSF_3281	SSF161098	MetI-like
YPDSF_3282	SSF53850	Periplasmic binding protein-like II
YPDSF_3283	SSF48230	Chondroitin AC/alginate lyase
YPDSF_3284	SSF48230	Chondroitin AC/alginate lyase
YPDSF_3285	SSF82771	GIY-YIG endonuclease
YPDSF_3286	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3287	SSF55718	SCP-like
YPDSF_3289	SSF51391	Thiamin phosphate synthase
YPDSF_3291	SSF56954	Outer membrane efflux proteins (OEP)
YPDSF_3292	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YPDSF_3292	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YPDSF_3292	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YPDSF_3293	SSF111369	HlyD-like secretion proteins
YPDSF_3294	SSF51679	Bacterial luciferase-like
YPDSF_3295	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_3297	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3298	SSF48452	TPR-like
YPDSF_3299	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
YPDSF_3299	SSF50249	Nucleic acid-binding proteins
YPDSF_3299	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3299	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
YPDSF_3299	SSF55666	Ribonuclease PH domain 2-like
YPDSF_3300	SSF53098	Ribonuclease H-like
YPDSF_3302	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3302	SSF54373	FAD-linked reductases, C-terminal domain
YPDSF_3303	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3304	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3305	SSF51161	Trimeric LpxA-like enzymes
YPDSF_3305	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_3306	SSF51011	Glycosyl hydrolase domain
YPDSF_3306	SSF51445	(Trans)glycosidases
YPDSF_3306	SSF81296	E set domains
YPDSF_3307	SSF51011	Glycosyl hydrolase domain
YPDSF_3307	SSF51445	(Trans)glycosidases
YPDSF_3307	SSF81296	E set domains
YPDSF_3308	SSF55781	GAF domain-like
YPDSF_3308	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3309	SSF49373	Invasin/intimin cell-adhesion fragments
YPDSF_3313	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3313	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_3318	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3320	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_3320	SSF53822	Periplasmic binding protein-like I
YPDSF_3321	SSF51182	RmlC-like cupins
YPDSF_3322	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_3322	SSF52172	CheY-like
YPDSF_3323	SSF53613	Ribokinase-like
YPDSF_3324	SSF51569	Aldolase
YPDSF_3325	SSF51182	RmlC-like cupins
YPDSF_3326	SSF53822	Periplasmic binding protein-like I
YPDSF_3328	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3331	SSF160996	HI0933 insert domain-like
YPDSF_3331	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3333	SSF143422	Transposase IS200-like
YPDSF_3335	SSF52402	Adenine nucleotide alpha hydrolases-like
YPDSF_3336	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3336	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YPDSF_3337	SSF51120	beta-Roll
YPDSF_3337	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPDSF_3338	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3339	SSF55486	Metalloproteases ("zincins"), catalytic domain
YPDSF_3341	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3342	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3342	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPDSF_3346	SSF110738	Glycerate kinase I
YPDSF_3350	SSF103515	Autotransporter
YPDSF_3350	SSF51126	Pectin lyase-like
YPDSF_3352	SSF54197	HIT-like
YPDSF_3354	SSF141868	EAL domain-like
YPDSF_3355	SSF55331	Tautomerase/MIF
YPDSF_3356	SSF53613	Ribokinase-like
YPDSF_3357	SSF63411	LuxS/MPP-like metallohydrolase
YPDSF_3358	SSF118215	Proton glutamate symport protein
YPDSF_3359	SSF49785	Galactose-binding domain-like
YPDSF_3362	SSF56935	Porins
YPDSF_3363	SSF141868	EAL domain-like
YPDSF_3363	SSF55073	Nucleotide cyclase
YPDSF_3364	SSF48208	Six-hairpin glycosidases
YPDSF_3365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3366	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3367	SSF161098	MetI-like
YPDSF_3368	SSF161098	MetI-like
YPDSF_3369	SSF53850	Periplasmic binding protein-like II
YPDSF_3371	SSF51126	Pectin lyase-like
YPDSF_3372	SSF103473	MFS general substrate transporter
YPDSF_3373	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3374	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_3374	SSF52172	CheY-like
YPDSF_3375	SSF53649	Alkaline phosphatase-like
YPDSF_3376	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3377	SSF46689	Homeodomain-like
YPDSF_3377	SSF53098	Ribonuclease H-like
YPDSF_3378	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3380	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3380	SSF50037	C-terminal domain of transcriptional repressors
YPDSF_3380	SSF55681	Class II aaRS and biotin synthetases
YPDSF_3381	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_3381	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
YPDSF_3382	SSF52218	Flavoproteins
YPDSF_3384	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3384	SSF54980	EF-G C-terminal domain-like
YPDSF_3385	SSF55920	Creatinase/aminopeptidase
YPDSF_3386	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_3386	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3386	SSF52096	ClpP/crotonase
YPDSF_3387	SSF53901	Thiolase-like
YPDSF_3388	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_3388	SSF63380	Riboflavin synthase domain-like
YPDSF_3389	SSF143968	UbiD C-terminal domain-like
YPDSF_3389	SSF50475	FMN-binding split barrel
YPDSF_3390	SSF82679	N-utilization substance G protein NusG, N-terminal domain
YPDSF_3391	SSF51569	Aldolase
YPDSF_3392	SSF51556	Metallo-dependent hydrolases
YPDSF_3396	SSF56112	Protein kinase-like (PK-like)
YPDSF_3397	SSF55718	SCP-like
YPDSF_3398	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3402	SSF52799	(Phosphotyrosine protein) phosphatases II
YPDSF_3403	SSF53167	Purine and uridine phosphorylases
YPDSF_3404	SSF53474	alpha/beta-Hydrolases
YPDSF_3405	SSF51726	UROD/MetE-like
YPDSF_3406	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3406	SSF53850	Periplasmic binding protein-like II
YPDSF_3407	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_3409	SSF51695	PLC-like phosphodiesterases
YPDSF_3410	SSF50331	MOP-like
YPDSF_3410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3411	SSF161098	MetI-like
YPDSF_3412	SSF161098	MetI-like
YPDSF_3413	SSF53850	Periplasmic binding protein-like II
YPDSF_3416	SSF49354	PapD-like
YPDSF_3421	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3422	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3425	SSF53822	Periplasmic binding protein-like I
YPDSF_3426	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3427	SSF143422	Transposase IS200-like
YPDSF_3428	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YPDSF_3428	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YPDSF_3430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3431	SSF47364	Domain of the SRP/SRP receptor G-proteins
YPDSF_3431	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3432	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3437	SSF55008	HMA, heavy metal-associated domain
YPDSF_3437	SSF56784	HAD-like
YPDSF_3437	SSF81653	Calcium ATPase, transduction domain A
YPDSF_3437	SSF81665	Calcium ATPase, transmembrane domain M
YPDSF_3438	SSF64307	SirA-like
YPDSF_3441	SSF46548	alpha-helical ferredoxin
YPDSF_3442	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3443	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3444	SSF51695	PLC-like phosphodiesterases
YPDSF_3446	SSF56784	HAD-like
YPDSF_3447	SSF53474	alpha/beta-Hydrolases
YPDSF_3450	SSF47819	HRDC-like
YPDSF_3450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3451	SSF56931	Outer membrane phospholipase A (OMPLA)
YPDSF_3452	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_3453	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_3454	SSF143865	CorA soluble domain-like
YPDSF_3454	SSF144083	Magnesium transport protein CorA, transmembrane region
YPDSF_3455	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_3457	SSF46689	Homeodomain-like
YPDSF_3458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3459	SSF56784	HAD-like
YPDSF_3460	SSF47823	lambda integrase-like, N-terminal domain
YPDSF_3460	SSF56349	DNA breaking-rejoining enzymes
YPDSF_3462	SSF54506	Diaminopimelate epimerase-like
YPDSF_3464	SSF55387	Frataxin/Nqo15-like
YPDSF_3467	SSF53850	Periplasmic binding protein-like II
YPDSF_3467	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
YPDSF_3468	SSF69618	HemD-like
YPDSF_3470	SSF48452	TPR-like
YPDSF_3471	SSF143422	Transposase IS200-like
YPDSF_3477	SSF53383	PLP-dependent transferases
YPDSF_3478	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3479	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_3480	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3481	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_3481	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3481	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
YPDSF_3482	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3483	SSF160355	Bacterial polysaccharide co-polymerase-like
YPDSF_3485	SSF50249	Nucleic acid-binding proteins
YPDSF_3485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3485	SSF68912	Rho N-terminal domain-like
YPDSF_3486	SSF52833	Thioredoxin-like
YPDSF_3487	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3488	SSF109604	HD-domain/PDEase-like
YPDSF_3488	SSF53067	Actin-like ATPase domain
YPDSF_3489	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3490	SSF54534	FKBP-like
YPDSF_3491	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
YPDSF_3492	SSF49401	Bacterial adhesins
YPDSF_3493	SSF49354	PapD-like
YPDSF_3493	SSF49584	Periplasmic chaperone C-domain
YPDSF_3494	SSF141729	FimD N-terminal domain-like
YPDSF_3495	SSF49401	Bacterial adhesins
YPDSF_3496	SSF49354	PapD-like
YPDSF_3496	SSF49584	Periplasmic chaperone C-domain
YPDSF_3501	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_3501	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3502	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3502	SSF53850	Periplasmic binding protein-like II
YPDSF_3509	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_3509	SSF55021	ACT-like
YPDSF_3510	SSF143975	IlvD/EDD N-terminal domain-like
YPDSF_3510	SSF52016	LeuD/IlvD-like
YPDSF_3511	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
YPDSF_3512	SSF55021	ACT-like
YPDSF_3513	SSF52467	DHS-like NAD/FAD-binding domain
YPDSF_3513	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YPDSF_3514	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3514	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3516	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3516	SSF53850	Periplasmic binding protein-like II
YPDSF_3519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3520	SSF53822	Periplasmic binding protein-like I
YPDSF_3521	SSF53681	Aspartate/glutamate racemase
YPDSF_3522	SSF56935	Porins
YPDSF_3523	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3525	SSF46689	Homeodomain-like
YPDSF_3526	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3526	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPDSF_3527	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3527	SSF53850	Periplasmic binding protein-like II
YPDSF_3528	SSF52833	Thioredoxin-like
YPDSF_3529	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3529	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YPDSF_3530	SSF74653	TolA/TonB C-terminal domain
YPDSF_3531	SSF111369	HlyD-like secretion proteins
YPDSF_3532	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3532	SSF90123	ABC transporter transmembrane region
YPDSF_3533	SSF54621	Heme-binding protein A (HasA)
YPDSF_3534	SSF56935	Porins
YPDSF_3535	SSF48557	L-aspartase-like
YPDSF_3536	SSF53633	Carbamate kinase-like
YPDSF_3537	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3537	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_3538	SSF53187	Zn-dependent exopeptidases
YPDSF_3538	SSF55031	Bacterial exopeptidase dimerisation domain
YPDSF_3539	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_3541	SSF53098	Ribonuclease H-like
YPDSF_3542	SSF47060	S15/NS1 RNA-binding domain
YPDSF_3543	SSF55120	Pseudouridine synthase
YPDSF_3543	SSF88697	PUA domain-like
YPDSF_3544	SSF89919	Ribosome-binding factor A, RbfA
YPDSF_3545	SSF46955	Putative DNA-binding domain
YPDSF_3545	SSF50447	Translation proteins
YPDSF_3545	SSF52156	Initiation factor IF2/eIF5b, domain 3
YPDSF_3545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3546	SSF47794	Rad51 N-terminal domain-like
YPDSF_3546	SSF50249	Nucleic acid-binding proteins
YPDSF_3546	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YPDSF_3546	SSF69705	Transcription factor NusA, N-terminal domain
YPDSF_3547	SSF74942	YhbC-like, C-terminal domain
YPDSF_3547	SSF75420	YhbC-like, N-terminal domain
YPDSF_3549	SSF53738	Phosphoglucomutase, first 3 domains
YPDSF_3549	SSF55957	Phosphoglucomutase, C-terminal domain
YPDSF_3550	SSF51717	Dihydropteroate synthetase-like
YPDSF_3551	SSF140990	FtsH protease domain-like
YPDSF_3551	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3552	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3553	SSF75471	YhbY-like
YPDSF_3554	SSF46557	GreA transcript cleavage protein, N-terminal domain
YPDSF_3554	SSF54534	FKBP-like
YPDSF_3555	SSF56601	beta-lactamase/transpeptidase-like
YPDSF_3556	SSF52172	CheY-like
YPDSF_3557	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_3557	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3558	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3558	SSF82051	Obg GTP-binding protein N-terminal domain
YPDSF_3559	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_3560	SSF110324	Ribosomal L27 protein-like
YPDSF_3561	SSF141091	L21p-like
YPDSF_3562	SSF48576	Terpenoid synthases
YPDSF_3563	SSF46955	Putative DNA-binding domain
YPDSF_3564	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_3565	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3565	SSF56327	LDH C-terminal domain-like
YPDSF_3566	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3566	SSF55252	C-terminal domain of arginine repressor
YPDSF_3567	SSF159871	YdgH-like
YPDSF_3568	SSF51984	MurCD N-terminal domain
YPDSF_3568	SSF53244	MurD-like peptide ligases, peptide-binding domain
YPDSF_3568	SSF53623	MurD-like peptide ligases, catalytic domain
YPDSF_3569	SSF56655	Carbohydrate phosphatase
YPDSF_3570	SSF50324	Inorganic pyrophosphatase
YPDSF_3571	SSF110857	Gamma-glutamyl cyclotransferase-like
YPDSF_3574	SSF55068	Peptide methionine sulfoxide reductase
YPDSF_3575	SSF54631	CBS-domain pair
YPDSF_3575	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_3577	SSF52833	Thioredoxin-like
YPDSF_3578	SSF56655	Carbohydrate phosphatase
YPDSF_3579	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YPDSF_3579	SSF56300	Metallo-dependent phosphatases
YPDSF_3581	SSF54534	FKBP-like
YPDSF_3584	SSF143422	Transposase IS200-like
YPDSF_3585	SSF55653	Ribosomal protein L9 C-domain
YPDSF_3585	SSF55658	L9 N-domain-like
YPDSF_3586	SSF46911	Ribosomal protein S18
YPDSF_3587	SSF54995	Ribosomal protein S6
YPDSF_3588	SSF53474	alpha/beta-Hydrolases
YPDSF_3589	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3590	SSF46689	Homeodomain-like
YPDSF_3590	SSF53098	Ribonuclease H-like
YPDSF_3591	SSF159871	YdgH-like
YPDSF_3592	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
YPDSF_3592	SSF56645	Acyl-CoA dehydrogenase NM domain-like
YPDSF_3593	SSF55315	L30e-like
YPDSF_3593	SSF75217	alpha/beta knot
YPDSF_3594	SSF50249	Nucleic acid-binding proteins
YPDSF_3595	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3596	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3598	SSF117892	Band 7/SPFH domain
YPDSF_3599	SSF117892	Band 7/SPFH domain
YPDSF_3600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3600	SSF54980	EF-G C-terminal domain-like
YPDSF_3601	SSF50182	Sm-like ribonucleoproteins
YPDSF_3602	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3603	SSF118116	DNA mismatch repair protein MutL
YPDSF_3603	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3603	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3604	SSF53187	Zn-dependent exopeptidases
YPDSF_3604	SSF54106	LysM domain
YPDSF_3605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3606	SSF53613	Ribokinase-like
YPDSF_3606	SSF64153	YjeF N-terminal domain-like
YPDSF_3607	SSF46548	alpha-helical ferredoxin
YPDSF_3608	SSF53098	Ribonuclease H-like
YPDSF_3609	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3612	SSF50182	Sm-like ribonucleoproteins
YPDSF_3612	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YPDSF_3612	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YPDSF_3613	SSF55681	Class II aaRS and biotin synthetases
YPDSF_3614	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YPDSF_3614	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3614	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YPDSF_3615	SSF46548	alpha-helical ferredoxin
YPDSF_3615	SSF54292	2Fe-2S ferredoxin-like
YPDSF_3616	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YPDSF_3617	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YPDSF_3618	SSF103481	Multidrug resistance efflux transporter EmrE
YPDSF_3619	SSF50104	Translation proteins SH3-like domain
YPDSF_3619	SSF50249	Nucleic acid-binding proteins
YPDSF_3620	SSF102114	Radical SAM enzymes
YPDSF_3622	SSF48592	GroEL equatorial domain-like
YPDSF_3622	SSF52029	GroEL apical domain-like
YPDSF_3622	SSF54849	GroEL-intermediate domain like
YPDSF_3623	SSF50129	GroES-like
YPDSF_3625	SSF48557	L-aspartase-like
YPDSF_3627	SSF54913	GlnB-like
YPDSF_3628	SSF52833	Thioredoxin-like
YPDSF_3628	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
YPDSF_3629	SSF50692	ADC-like
YPDSF_3629	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YPDSF_3630	SSF54862	4Fe-4S ferredoxins
YPDSF_3631	SSF51971	Nucleotide-binding domain
YPDSF_3631	SSF54862	4Fe-4S ferredoxins
YPDSF_3632	SSF46689	Homeodomain-like
YPDSF_3632	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPDSF_3639	SSF46689	Homeodomain-like
YPDSF_3639	SSF51182	RmlC-like cupins
YPDSF_3640	SSF46689	Homeodomain-like
YPDSF_3640	SSF51215	Regulatory protein AraC
YPDSF_3642	SSF53067	Actin-like ATPase domain
YPDSF_3643	SSF51658	Xylose isomerase-like
YPDSF_3644	SSF53639	AraD/HMP-PK domain-like
YPDSF_3645	SSF56796	Dehydroquinate synthase-like
YPDSF_3646	SSF54909	Dimeric alpha+beta barrel
YPDSF_3647	SSF50249	Nucleic acid-binding proteins
YPDSF_3648	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3649	SSF142906	YjbR-like
YPDSF_3650	SSF53383	PLP-dependent transferases
YPDSF_3651	SSF50621	Alanine racemase C-terminal domain-like
YPDSF_3651	SSF51419	PLP-binding barrel
YPDSF_3652	SSF48024	N-terminal domain of DnaB helicase
YPDSF_3652	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3653	SSF50129	GroES-like
YPDSF_3653	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3655	SSF51395	FMN-linked oxidoreductases
YPDSF_3656	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3657	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3657	SSF51306	LexA/Signal peptidase
YPDSF_3659	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YPDSF_3661	SSF64288	Chorismate lyase-like
YPDSF_3662	SSF51126	Pectin lyase-like
YPDSF_3663	SSF103515	Autotransporter
YPDSF_3663	SSF51126	Pectin lyase-like
YPDSF_3664	SSF49265	Fibronectin type III
YPDSF_3664	SSF51055	Carbohydrate binding domain
YPDSF_3664	SSF56176	FAD-binding/transporter-associated domain-like
YPDSF_3666	SSF103473	MFS general substrate transporter
YPDSF_3667	SSF49354	PapD-like
YPDSF_3667	SSF49584	Periplasmic chaperone C-domain
YPDSF_3668	SSF141729	FimD N-terminal domain-like
YPDSF_3673	SSF158682	TerB-like
YPDSF_3676	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_3677	SSF53271	PRTase-like
YPDSF_3678	SSF56784	HAD-like
YPDSF_3680	SSF51621	Phosphoenolpyruvate/pyruvate domain
YPDSF_3681	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3682	SSF51730	FAD-linked oxidoreductase
YPDSF_3683	SSF102114	Radical SAM enzymes
YPDSF_3684	SSF144064	Heme iron utilization protein-like
YPDSF_3685	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3687	SSF56935	Porins
YPDSF_3688	SSF144064	Heme iron utilization protein-like
YPDSF_3689	SSF53807	"Helical backbone" metal receptor
YPDSF_3690	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_3691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3692	SSF53383	PLP-dependent transferases
YPDSF_3694	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3694	SSF53850	Periplasmic binding protein-like II
YPDSF_3695	SSF64307	SirA-like
YPDSF_3697	SSF160544	EscU C-terminal domain-like
YPDSF_3701	SSF101801	Surface presentation of antigens (SPOA)
YPDSF_3704	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3711	SSF46689	Homeodomain-like
YPDSF_3715	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
YPDSF_3715	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_3715	SSF52172	CheY-like
YPDSF_3715	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3716	SSF46894	C-terminal effector domain of the bipartite response regulators
YPDSF_3716	SSF52172	CheY-like
YPDSF_3717	SSF118215	Proton glutamate symport protein
YPDSF_3718	SSF56801	Acetyl-CoA synthetase-like
YPDSF_3721	SSF53474	alpha/beta-Hydrolases
YPDSF_3722	SSF46689	Homeodomain-like
YPDSF_3722	SSF53098	Ribonuclease H-like
YPDSF_3723	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3724	SSF53098	Ribonuclease H-like
YPDSF_3725	SSF46689	Homeodomain-like
YPDSF_3726	SSF52335	Methylglyoxal synthase-like
YPDSF_3726	SSF53927	Cytidine deaminase-like
YPDSF_3727	SSF51246	Rudiment single hybrid motif
YPDSF_3727	SSF52440	PreATP-grasp domain
YPDSF_3727	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_3729	SSF47729	IHF-like DNA-binding proteins
YPDSF_3732	SSF51726	UROD/MetE-like
YPDSF_3734	SSF55811	Nudix
YPDSF_3737	SSF51391	Thiamin phosphate synthase
YPDSF_3738	SSF69572	Activating enzymes of the ubiquitin-like proteins
YPDSF_3739	SSF54285	MoaD/ThiS
YPDSF_3744	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YPDSF_3745	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YPDSF_3746	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
YPDSF_3746	SSF54736	ClpS-like
YPDSF_3747	SSF160369	Ribosomal protein L10-like
YPDSF_3748	SSF56808	Ribosomal protein L1
YPDSF_3749	SSF46906	Ribosomal protein L11, C-terminal domain
YPDSF_3749	SSF54747	Ribosomal L11/L12e N-terminal domain
YPDSF_3750	SSF50104	Translation proteins SH3-like domain
YPDSF_3750	SSF82679	N-utilization substance G protein NusG, N-terminal domain
YPDSF_3752	SSF50447	Translation proteins
YPDSF_3752	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YPDSF_3752	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3754	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3755	SSF46689	Homeodomain-like
YPDSF_3755	SSF53098	Ribonuclease H-like
YPDSF_3756	SSF53474	alpha/beta-Hydrolases
YPDSF_3759	SSF48557	L-aspartase-like
YPDSF_3760	SSF111326	Urocanase
YPDSF_3761	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YPDSF_3762	SSF53271	PRTase-like
YPDSF_3764	SSF56059	Glutathione synthetase ATP-binding domain-like
YPDSF_3765	SSF53807	"Helical backbone" metal receptor
YPDSF_3766	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_3767	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YPDSF_3768	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3771	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_3775	SSF56349	DNA breaking-rejoining enzymes
YPDSF_3776	SSF46689	Homeodomain-like
YPDSF_3776	SSF53822	Periplasmic binding protein-like I
YPDSF_3778	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3779	SSF53822	Periplasmic binding protein-like I
YPDSF_3780	SSF51658	Xylose isomerase-like
YPDSF_3781	SSF53067	Actin-like ATPase domain
YPDSF_3782	SSF49401	Bacterial adhesins
YPDSF_3783	SSF49354	PapD-like
YPDSF_3783	SSF49584	Periplasmic chaperone C-domain
YPDSF_3785	SSF141729	FimD N-terminal domain-like
YPDSF_3786	SSF49401	Bacterial adhesins
YPDSF_3788	SSF46689	Homeodomain-like
YPDSF_3788	SSF48295	TrpR-like
YPDSF_3789	SSF53098	Ribonuclease H-like
YPDSF_3790	SSF51730	FAD-linked oxidoreductase
YPDSF_3791	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3791	SSF53633	Carbamate kinase-like
YPDSF_3791	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YPDSF_3792	SSF53383	PLP-dependent transferases
YPDSF_3793	SSF47598	Ribbon-helix-helix
YPDSF_3796	SSF143800	L28p-like
YPDSF_3797	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3798	SSF47413	lambda repressor-like DNA-binding domains
YPDSF_3798	SSF53822	Periplasmic binding protein-like I
YPDSF_3799	SSF110997	Sporulation related repeat
YPDSF_3800	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_3801	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3803	SSF89562	RraA-like
YPDSF_3807	SSF51230	Single hybrid motif
YPDSF_3808	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3808	SSF90123	ABC transporter transmembrane region
YPDSF_3810	SSF143422	Transposase IS200-like
YPDSF_3812	SSF81338	Aquaporin-like
YPDSF_3813	SSF53067	Actin-like ATPase domain
YPDSF_3814	SSF56655	Carbohydrate phosphatase
YPDSF_3815	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YPDSF_3815	SSF63380	Riboflavin synthase domain-like
YPDSF_3818	SSF51351	Triosephosphate isomerase (TIM)
YPDSF_3819	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3819	SSF53850	Periplasmic binding protein-like II
YPDSF_3820	SSF102588	LmbE-like
YPDSF_3821	SSF89562	RraA-like
YPDSF_3824	SSF53850	Periplasmic binding protein-like II
YPDSF_3825	SSF53850	Periplasmic binding protein-like II
YPDSF_3826	SSF53784	Phosphofructokinase
YPDSF_3827	SSF160240	Cation efflux protein cytoplasmic domain-like
YPDSF_3827	SSF161111	Cation efflux protein transmembrane domain-like
YPDSF_3830	SSF56349	DNA breaking-rejoining enzymes
YPDSF_3832	SSF52172	CheY-like
YPDSF_3833	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_3833	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3834	SSF46689	Homeodomain-like
YPDSF_3834	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YPDSF_3834	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
YPDSF_3834	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
YPDSF_3835	SSF75217	alpha/beta knot
YPDSF_3836	SSF51161	Trimeric LpxA-like enzymes
YPDSF_3837	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YPDSF_3837	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3838	SSF54611	SecB-like
YPDSF_3839	SSF52833	Thioredoxin-like
YPDSF_3840	SSF52821	Rhodanese/Cell cycle control phosphatase
YPDSF_3841	SSF53649	Alkaline phosphatase-like
YPDSF_3841	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
YPDSF_3842	SSF51261	Duplicated hybrid motif
YPDSF_3843	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_3844	SSF88713	Glycoside hydrolase/deacetylase
YPDSF_3845	SSF50129	GroES-like
YPDSF_3845	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3846	SSF53383	PLP-dependent transferases
YPDSF_3847	SSF51735	NAD(P)-binding Rossmann-fold domains
YPDSF_3848	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3849	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3850	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YPDSF_3851	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_3852	SSF52374	Nucleotidylyl transferase
YPDSF_3853	SSF46946	S13-like H2TH domain
YPDSF_3853	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YPDSF_3853	SSF81624	N-terminal domain of MutM-like DNA repair proteins
YPDSF_3854	SSF57829	Zn-binding ribosomal proteins
YPDSF_3855	SSF143800	L28p-like
YPDSF_3856	SSF47781	RuvA domain 2-like
YPDSF_3857	SSF102645	CoaB-like
YPDSF_3857	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YPDSF_3858	SSF51283	dUTPase-like
YPDSF_3859	SSF46689	Homeodomain-like
YPDSF_3859	SSF48498	Tetracyclin repressor-like, C-terminal domain
YPDSF_3860	SSF53271	PRTase-like
YPDSF_3861	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3861	SSF55666	Ribonuclease PH domain 2-like
YPDSF_3864	SSF47781	RuvA domain 2-like
YPDSF_3864	SSF50249	Nucleic acid-binding proteins
YPDSF_3864	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YPDSF_3865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3866	SSF63562	RPB6/omega subunit-like
YPDSF_3867	SSF109604	HD-domain/PDEase-like
YPDSF_3867	SSF55021	ACT-like
YPDSF_3867	SSF81271	TGS-like
YPDSF_3867	SSF81301	Nucleotidyltransferase
YPDSF_3868	SSF75217	alpha/beta knot
YPDSF_3869	SSF50249	Nucleic acid-binding proteins
YPDSF_3869	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3873	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YPDSF_3873	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_3874	SSF46689	Homeodomain-like
YPDSF_3874	SSF53098	Ribonuclease H-like
YPDSF_3875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3876	SSF69500	DTD-like
YPDSF_3878	SSF56784	HAD-like
YPDSF_3879	SSF50447	Translation proteins
YPDSF_3879	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3879	SSF54980	EF-G C-terminal domain-like
YPDSF_3880	SSF54368	Glutamine synthetase, N-terminal domain
YPDSF_3880	SSF55931	Glutamine synthetase/guanido kinase
YPDSF_3881	SSF47384	Homodimeric domain of signal transducing histidine kinase
YPDSF_3881	SSF55785	PYP-like sensor domain (PAS domain)
YPDSF_3881	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YPDSF_3882	SSF46689	Homeodomain-like
YPDSF_3882	SSF52172	CheY-like
YPDSF_3882	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3883	SSF102114	Radical SAM enzymes
YPDSF_3885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3886	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YPDSF_3886	SSF53098	Ribonuclease H-like
YPDSF_3886	SSF56672	DNA/RNA polymerases
YPDSF_3886	SSF88723	PIN domain-like
YPDSF_3887	SSF52833	Thioredoxin-like
YPDSF_3888	SSF56112	Protein kinase-like (PK-like)
YPDSF_3890	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_3891	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3893	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3893	SSF48008	GntR ligand-binding domain-like
YPDSF_3894	SSF103473	MFS general substrate transporter
YPDSF_3898	SSF102546	RbsD-like
YPDSF_3900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3901	SSF53300	vWA-like
YPDSF_3902	SSF55681	Class II aaRS and biotin synthetases
YPDSF_3903	SSF46785	"Winged helix" DNA-binding domain
YPDSF_3903	SSF54909	Dimeric alpha+beta barrel
YPDSF_3904	SSF52218	Flavoproteins
YPDSF_3905	SSF51905	FAD/NAD(P)-binding domain
YPDSF_3906	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_3908	SSF81336	F1F0 ATP synthase subunit A
YPDSF_3909	SSF81333	F1F0 ATP synthase subunit C
YPDSF_3910	SSF81573	F1F0 ATP synthase subunit B, membrane domain
YPDSF_3911	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
YPDSF_3912	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YPDSF_3912	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YPDSF_3912	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3913	SSF52943	ATP synthase (F1-ATPase), gamma subunit
YPDSF_3914	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YPDSF_3914	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YPDSF_3914	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3915	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
YPDSF_3915	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
YPDSF_3916	SSF51161	Trimeric LpxA-like enzymes
YPDSF_3916	SSF53448	Nucleotide-diphospho-sugar transferases
YPDSF_3917	SSF53697	SIS domain
YPDSF_3917	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YPDSF_3918	SSF53850	Periplasmic binding protein-like II
YPDSF_3919	SSF161098	MetI-like
YPDSF_3920	SSF161098	MetI-like
YPDSF_3921	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3922	SSF109755	PhoU-like
YPDSF_3924	SSF53850	Periplasmic binding protein-like II
YPDSF_3925	SSF161098	MetI-like
YPDSF_3926	SSF161098	MetI-like
YPDSF_3927	SSF56784	HAD-like
YPDSF_3931	SSF116878	TrmE connector domain
YPDSF_3931	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3934	SSF54211	Ribosomal protein S5 domain 2-like
YPDSF_3938	SSF56024	Phospholipase D/nuclease
YPDSF_3944	SSF56112	Protein kinase-like (PK-like)
YPDSF_3947	SSF53098	Ribonuclease H-like
YPDSF_3949	SSF52799	(Phosphotyrosine protein) phosphatases II
YPDSF_3949	SSF64449	YopH tyrosine phosphatase N-terminal domain
YPDSF_3952	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3953	SSF46689	Homeodomain-like
YPDSF_3953	SSF53098	Ribonuclease H-like
YPDSF_3954	SSF53098	Ribonuclease H-like
YPDSF_3956	SSF46689	Homeodomain-like
YPDSF_3957	SSF64449	YopH tyrosine phosphatase N-terminal domain
YPDSF_3958	SSF160527	V-type ATPase subunit E-like
YPDSF_3962	SSF140591	Type III secretion system domain
YPDSF_3964	SSF140129	MxiH-like
YPDSF_3966	SSF49879	SMAD/FHA domain
YPDSF_3968	SSF69635	Type III secretory system chaperone-like
YPDSF_3969	SSF46689	Homeodomain-like
YPDSF_3969	SSF51215	Regulatory protein AraC
YPDSF_3970	SSF160544	EscU C-terminal domain-like
YPDSF_3974	SSF101801	Surface presentation of antigens (SPOA)
YPDSF_3977	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_3978	SSF140591	Type III secretion system domain
YPDSF_3979	SSF140591	Type III secretion system domain
YPDSF_3980	SSF69635	Type III secretory system chaperone-like
YPDSF_3982	SSF48452	TPR-like
YPDSF_3986	SSF103388	Virulence-associated V antigen
YPDSF_3987	SSF48452	TPR-like
YPDSF_3996	SSF52058	L domain-like
YPDSF_4000	SSF69635	Type III secretory system chaperone-like
YPDSF_4001	SSF54001	Cysteine proteinases
YPDSF_4004	SSF46689	Homeodomain-like
YPDSF_4005	SSF53098	Ribonuclease H-like
YPDSF_4006	SSF53098	Ribonuclease H-like
YPDSF_4008	SSF46955	Putative DNA-binding domain
YPDSF_4008	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4009	SSF109709	KorB DNA-binding domain-like
YPDSF_4009	SSF110849	ParB/Sulfiredoxin
YPDSF_4011	SSF47598	Ribbon-helix-helix
YPDSF_4013	SSF47233	Bacterial GAP domain
YPDSF_4013	SSF69635	Type III secretory system chaperone-like
YPDSF_4014	SSF69635	Type III secretory system chaperone-like
YPDSF_4015	SSF53098	Ribonuclease H-like
YPDSF_4016	SSF53098	Ribonuclease H-like
YPDSF_4017	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4018	SSF69635	Type III secretory system chaperone-like
YPDSF_4019	SSF53098	Ribonuclease H-like
YPDSF_4020	SSF46689	Homeodomain-like
YPDSF_4021	SSF46689	Homeodomain-like
YPDSF_4021	SSF53041	Resolvase-like
YPDSF_4024	SSF101967	Adhesin YadA, collagen-binding domain
YPDSF_4024	SSF54523	Pili subunits
YPDSF_4026	SSF46689	Homeodomain-like
YPDSF_4027	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4028	SSF46689	Homeodomain-like
YPDSF_4029	SSF46689	Homeodomain-like
YPDSF_4029	SSF53098	Ribonuclease H-like
YPDSF_4030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4032	SSF88874	Receptor-binding domain of short tail fibre protein gp12
YPDSF_4034	SSF49265	Fibronectin type III
YPDSF_4036	SSF102712	JAB1/MPN domain
YPDSF_4036	SSF54001	Cysteine proteinases
YPDSF_4039	SSF57997	Tropomyosin
YPDSF_4042	SSF49373	Invasin/intimin cell-adhesion fragments
YPDSF_4048	SSF49373	Invasin/intimin cell-adhesion fragments
YPDSF_4049	SSF56563	Major capsid protein gp5
YPDSF_4052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4055	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YPDSF_4057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4058	SSF110849	ParB/Sulfiredoxin
YPDSF_4059	SSF110849	ParB/Sulfiredoxin
YPDSF_4060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4065	SSF143422	Transposase IS200-like
YPDSF_4068	SSF143422	Transposase IS200-like
YPDSF_4070	SSF47240	Ferritin-like
YPDSF_4071	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YPDSF_4071	SSF51998	PFL-like glycyl radical enzymes
YPDSF_4072	SSF53098	Ribonuclease H-like
YPDSF_4073	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4074	SSF56300	Metallo-dependent phosphatases
YPDSF_4075	SSF53850	Periplasmic binding protein-like II
YPDSF_4084	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4086	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YPDSF_4086	SSF88723	PIN domain-like
YPDSF_4091	SSF52141	Uracil-DNA glycosylase-like
YPDSF_4092	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4093	SSF53300	vWA-like
YPDSF_4095	SSF56349	DNA breaking-rejoining enzymes
YPDSF_4097	SSF141729	FimD N-terminal domain-like
YPDSF_4098	SSF49354	PapD-like
YPDSF_4098	SSF49584	Periplasmic chaperone C-domain
YPDSF_4101	SSF50249	Nucleic acid-binding proteins
YPDSF_4101	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YPDSF_4107	SSF52833	Thioredoxin-like
YPDSF_4115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4124	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4125	SSF55464	Origin of replication-binding domain, RBD-like
YPDSF_4127	SSF48657	FinO-like
YPDSF_4128	SSF52833	Thioredoxin-like
YPDSF_4129	SSF56024	Phospholipase D/nuclease
YPDSF_4133	SSF56672	DNA/RNA polymerases
YPDSF_4134	SSF56024	Phospholipase D/nuclease
YPDSF_4135	SSF56024	Phospholipase D/nuclease
YPDSF_4138	SSF53041	Resolvase-like
YPDSF_4139	SSF143120	YefM-like
YPDSF_4140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4142	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YPDSF_4143	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YPDSF_4148	SSF54786	YcfA/nrd intein domain
YPDSF_4149	SSF109709	KorB DNA-binding domain-like
YPDSF_4149	SSF110849	ParB/Sulfiredoxin
YPDSF_4154	SSF49401	Bacterial adhesins
YPDSF_4155	SSF46689	Homeodomain-like
YPDSF_4155	SSF55136	Probable bacterial effector-binding domain