CH43_1	PF01915	Glycosyl hydrolase family 3 C-terminal domain
CH43_1	PF14310	Fibronectin type III-like domain
CH43_10	PF00782	Dual specificity phosphatase, catalytic domain
CH43_10	PF14378	CH43_10
CH43_100	PF12836	Helix-hairpin-helix motif
CH43_1000	PF07338	Protein of unknown function (DUF1471)
CH43_1001	PF00665	Integrase core domain
CH43_1001	PF02796	Helix-turn-helix domain of resolvase
CH43_1002	PF01695	IstB-like ATP binding protein
CH43_1003	PF00884	Sulfatase
CH43_1003	PF08019	CH43_1003
CH43_1004	PF00072	Response regulator receiver domain
CH43_1004	PF00196	Bacterial regulatory proteins, luxR family
CH43_1005	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_1005	PF05231	CH43_1005
CH43_1005	PF07730	Histidine kinase
CH43_1006	PF07690	Major Facilitator Superfamily
CH43_1009	PF05860	haemagglutination activity domain
CH43_101	PF13145	PPIC-type PPIASE domain
CH43_101	PF13624	SurA N-terminal domain
CH43_1010	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
CH43_1010	PF08479	POTRA domain, ShlB-type
CH43_1010	PF17287	CH43_1010
CH43_1012	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_1013	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1014	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1014	PF12911	CH43_1014
CH43_1015	PF00005	ABC transporter
CH43_1015	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CH43_1016	PF00005	ABC transporter
CH43_1016	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CH43_1017	PF01270	Glycosyl hydrolases family 8
CH43_1018	PF00563	EAL domain
CH43_1018	PF00990	GGDEF domain
CH43_1018	PF17154	CH43_1018
CH43_1019	PF06178	Oligogalacturonate-specific porin protein (KdgM)
CH43_102	PF01797	Transposase IS200 like
CH43_1020	PF06917	Periplasmic pectate lyase
CH43_1021	PF00754	F5/8 type C domain
CH43_1022	PF00375	Sodium:dicarboxylate symporter family
CH43_1024	PF00675	Insulinase (Peptidase family M16)
CH43_1024	PF05193	Peptidase M16 inactive domain
CH43_1025	PF00294	pfkB family carbohydrate kinase
CH43_1026	PF01361	Tautomerase enzyme
CH43_1027	PF00563	EAL domain
CH43_1028	PF05170	CH43_1028
CH43_1029	PF02611	CDP-diacylglycerol pyrophosphatase
CH43_1030	PF03631	CH43_1030
CH43_1031	PF03212	Pertactin
CH43_1031	PF03797	Autotransporter beta-domain
CH43_1032	PF11692	CH43_1032
CH43_1033	PF06092	CH43_1033
CH43_1034	PF06092	CH43_1034
CH43_1035	PF02595	Glycerate kinase family
CH43_1036	PF02447	CH43_1036
CH43_1037	PF05651	CH43_1037
CH43_1037	PF13556	PucR C-terminal helix-turn-helix domain
CH43_1038	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CH43_1038	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_1039	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
CH43_104	PF00216	Bacterial DNA-binding protein
CH43_1040	PF01432	Peptidase family M3
CH43_1041	PF04445	Putative SAM-dependent methyltransferase
CH43_1042	PF08548	Peptidase M10 serralysin C terminal
CH43_1043	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CH43_1043	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CH43_1044	PF00582	Universal stress protein family
CH43_1045	PF10625	CH43_1045
CH43_1046	PF01797	Transposase IS200 like
CH43_1047	PF01384	CH43_1047
CH43_1048	PF03486	HI0933-like protein
CH43_1049	PF00072	Response regulator receiver domain
CH43_1049	PF00512	His Kinase A (phospho-acceptor) domain
CH43_1049	PF00672	HAMP domain
CH43_1049	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_1049	PF12860	CH43_1049
CH43_105	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_105	PF02190	ATP-dependent protease La (LON) domain
CH43_105	PF05362	Lon protease (S16) C-terminal proteolytic domain
CH43_1050	PF00005	ABC transporter
CH43_1051	PF02653	CH43_1051
CH43_1052	PF13407	Periplasmic binding protein domain
CH43_1053	PF07385	Protein of unknown function (DUF1498)
CH43_1054	PF01116	Fructose-bisphosphate aldolase class-II
CH43_1055	PF00294	pfkB family carbohydrate kinase
CH43_1056	PF00072	Response regulator receiver domain
CH43_1056	PF00486	Transcriptional regulatory protein, C terminal
CH43_1058	PF02678	Pirin
CH43_106	PF06689	ClpX C4-type zinc finger
CH43_106	PF07724	AAA domain (Cdc48 subfamily)
CH43_106	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_1061	PF02447	CH43_1061
CH43_1062	PF01202	Shikimate kinase
CH43_1066	PF01914	CH43_1066
CH43_1067	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CH43_1067	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CH43_107	PF00574	Clp protease
CH43_1072	PF01476	LysM domain
CH43_1072	PF02369	Bacterial Ig-like domain (group 1)
CH43_1072	PF11924	Protein of unknown function (DUF3442)
CH43_1073	PF06580	CH43_1073
CH43_1073	PF07694	5TMR of 5TMR-LYT
CH43_1074	PF00128	Alpha amylase, catalytic domain
CH43_1074	PF02806	Alpha amylase, C-terminal all-beta domain
CH43_1074	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CH43_1075	PF00128	Alpha amylase, catalytic domain
CH43_1075	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CH43_1076	PF00483	Nucleotidyl transferase
CH43_1077	PF00534	Glycosyl transferases group 1
CH43_1077	PF08323	Starch synthase catalytic domain
CH43_1078	PF00343	Carbohydrate phosphorylase
CH43_1079	PF01266	FAD dependent oxidoreductase
CH43_1079	PF16901	CH43_1079
CH43_108	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CH43_108	PF05697	Bacterial trigger factor protein (TF)
CH43_108	PF05698	Bacterial trigger factor protein (TF) C-terminus
CH43_1081	PF06092	CH43_1081
CH43_1082	PF13333	CH43_1082
CH43_1083	PF13518	Helix-turn-helix domain
CH43_1084	PF00013	KH domain
CH43_1084	PF00575	S1 RNA binding domain
CH43_1084	PF01138	3' exoribonuclease family, domain 1
CH43_1084	PF03725	3' exoribonuclease family, domain 2
CH43_1084	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
CH43_1085	PF07719	Tetratricopeptide repeat
CH43_1085	PF13181	Tetratricopeptide repeat
CH43_1086	PF00270	DEAD/DEAH box helicase
CH43_1086	PF00271	Helicase conserved C-terminal domain
CH43_1086	PF03880	DbpA RNA binding domain
CH43_1086	PF12343	CH43_1086
CH43_1087	PF05973	CH43_1087
CH43_1088	PF01381	Helix-turn-helix
CH43_1089	PF00296	Luciferase-like monooxygenase
CH43_1091	PF16576	CH43_1091
CH43_1092	PF00873	AcrB/AcrD/AcrF family
CH43_1093	PF02321	Outer membrane efflux protein
CH43_1094	PF01136	CH43_1094
CH43_1095	PF01136	CH43_1095
CH43_1096	PF02036	SCP-2 sterol transfer family
CH43_1097	PF00583	Acetyltransferase (GNAT) family
CH43_1098	PF01541	GIY-YIG catalytic domain
CH43_1099	PF05426	Alginate lyase
CH43_1099	PF07940	Heparinase II/III-like protein
CH43_11	PF12146	Putative lysophospholipase
CH43_11	PF12147	CH43_11
CH43_110	PF01722	BolA-like protein
CH43_1100	PF05426	Alginate lyase
CH43_1101	PF01547	Bacterial extracellular solute-binding protein
CH43_1102	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1103	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1104	PF00005	ABC transporter
CH43_1104	PF08402	TOBE domain
CH43_1105	PF05426	Alginate lyase
CH43_1108	PF12706	Beta-lactamase superfamily domain
CH43_1109	PF13238	AAA domain
CH43_111	PF03923	CH43_111
CH43_111	PF08139	CH43_111
CH43_1110	PF07969	Amidohydrolase family
CH43_1111	PF00005	ABC transporter
CH43_1112	PF00005	ABC transporter
CH43_1113	PF06007	CH43_1113
CH43_1114	PF05861	CH43_1114
CH43_1115	PF05845	Bacterial phosphonate metabolism protein (PhnH)
CH43_1116	PF06754	CH43_1116
CH43_1117	PF00392	Bacterial regulatory proteins, gntR family
CH43_1117	PF07702	UTRA domain
CH43_1119	PF13353	4Fe-4S single cluster domain
CH43_112	PF07690	Major Facilitator Superfamily
CH43_1120	PF03477	ATP cone domain
CH43_1120	PF13597	Anaerobic ribonucleoside-triphosphate reductase
CH43_1121	PF00005	ABC transporter
CH43_1122	PF00005	ABC transporter
CH43_1123	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1123	PF12911	CH43_1123
CH43_1124	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1127	PF04074	Domain of unknown function (DUF386)
CH43_1128	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CH43_1128	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CH43_1129	PF06877	Regulator of ribonuclease activity B
CH43_113	PF03502	Nucleoside-specific channel-forming protein, Tsx
CH43_1130	PF00583	Acetyltransferase (GNAT) family
CH43_1131	PF00133	tRNA synthetases class I (I, L, M and V)
CH43_1131	PF08264	Anticodon-binding domain of tRNA
CH43_1131	PF10458	Valyl tRNA synthetase tRNA binding arm
CH43_1132	PF04364	DNA polymerase III chi subunit, HolC
CH43_1133	PF00883	Cytosol aminopeptidase family, catalytic domain
CH43_1133	PF02789	Cytosol aminopeptidase family, N-terminal domain
CH43_1134	PF03739	CH43_1134
CH43_1135	PF03739	CH43_1135
CH43_1137	PF00589	Phage integrase family
CH43_1137	PF13356	Domain of unknown function (DUF4102)
CH43_1138	PF03235	CH43_1138
CH43_1138	PF07510	CH43_1138
CH43_1139	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_114	PF06481	COX Aromatic Rich Motif
CH43_1140	PF01695	IstB-like ATP binding protein
CH43_1141	PF00665	Integrase core domain
CH43_1141	PF02796	Helix-turn-helix domain of resolvase
CH43_1142	PF07728	AAA domain (dynein-related subfamily)
CH43_1143	PF10117	CH43_1143
CH43_1144	PF01527	Transposase
CH43_1145	PF01555	DNA methylase
CH43_1146	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_115	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CH43_1151	PF13558	Putative exonuclease SbcCD, C subunit
CH43_1152	PF09983	CH43_1152
CH43_1152	PF11795	CH43_1152
CH43_1153	PF01435	Peptidase family M48
CH43_1154	PF05987	CH43_1154
CH43_1156	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CH43_1157	PF12833	Helix-turn-helix domain
CH43_1158	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CH43_1159	PF02378	Phosphotransferase system, EIIC
CH43_116	PF00510	Cytochrome c oxidase subunit III
CH43_1160	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CH43_1160	PF00381	PTS HPr component phosphorylation site
CH43_1160	PF00391	PEP-utilising enzyme, mobile domain
CH43_1160	PF02896	PEP-utilising enzyme, TIM barrel domain
CH43_1160	PF05524	PEP-utilising enzyme, N-terminal
CH43_1161	PF10696	CH43_1161
CH43_1162	PF03992	Antibiotic biosynthesis monooxygenase
CH43_1163	PF01791	DeoC/LacD family aldolase
CH43_1164	PF13407	Periplasmic binding protein domain
CH43_1165	PF02653	CH43_1165
CH43_1166	PF02653	CH43_1166
CH43_1167	PF00005	ABC transporter
CH43_1168	PF04198	Putative sugar-binding domain
CH43_1169	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_1169	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_117	PF03626	CH43_117
CH43_1170	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CH43_1171	PF04932	CH43_1171
CH43_1172	PF06305	CH43_1172
CH43_1173	PF16576	CH43_1173
CH43_1174	PF00873	AcrB/AcrD/AcrF family
CH43_1176	PF01095	Pectinesterase
CH43_1177	PF00990	GGDEF domain
CH43_1178	PF07256	CH43_1178
CH43_118	PF01040	UbiA prenyltransferase family
CH43_1180	PF05175	Methyltransferase small domain
CH43_1180	PF08468	Methyltransferase small domain N-terminal
CH43_1181	PF03603	DNA polymerase III psi subunit
CH43_1182	PF00583	Acetyltransferase (GNAT) family
CH43_1183	PF00009	Elongation factor Tu GTP binding domain
CH43_1183	PF03144	Elongation factor Tu domain 2
CH43_1183	PF16658	CH43_1183
CH43_1184	PF04972	BON domain
CH43_1185	PF07043	CH43_1185
CH43_1186	PF01734	Patatin-like phospholipase
CH43_1187	PF01026	TatD related DNase
CH43_1188	PF01773	Na+ dependent nucleoside transporter N-terminus
CH43_1188	PF07662	Na+ dependent nucleoside transporter C-terminus
CH43_1188	PF07670	Nucleoside recognition
CH43_1189	PF01791	DeoC/LacD family aldolase
CH43_119	PF07690	Major Facilitator Superfamily
CH43_1190	PF00591	Glycosyl transferase family, a/b domain
CH43_1190	PF02885	Glycosyl transferase family, helical bundle domain
CH43_1190	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
CH43_1191	PF01676	Metalloenzyme superfamily
CH43_1192	PF01048	Phosphorylase superfamily
CH43_1193	PF10144	CH43_1193
CH43_1194	PF12710	haloacid dehalogenase-like hydrolase
CH43_1195	PF13481	AAA domain
CH43_1195	PF13541	Subunit ChlI of Mg-chelatase
CH43_1196	PF01381	Helix-turn-helix
CH43_1196	PF13521	AAA domain
CH43_1199	PF00005	ABC transporter
CH43_1199	PF12848	ABC transporter
CH43_12	PF01553	Acyltransferase
CH43_120	PF04461	Protein of unknown function (DUF520)
CH43_1200	PF00691	OmpA family
CH43_1201	PF00990	GGDEF domain
CH43_1201	PF17152	CH43_1201
CH43_1202	PF13689	CH43_1202
CH43_1203	PF00122	E1-E2 ATPase
CH43_1203	PF00689	Cation transporting ATPase, C-terminus
CH43_1203	PF00690	Cation transporter/ATPase, N-terminus
CH43_1203	PF00702	haloacid dehalogenase-like hydrolase
CH43_1204	PF01464	Transglycosylase SLT domain
CH43_1204	PF14718	Soluble lytic murein transglycosylase L domain
CH43_1205	PF01931	Protein of unknown function DUF84
CH43_1206	PF01371	Trp repressor protein
CH43_1207	PF06445	GyrI-like small molecule binding domain
CH43_1207	PF12833	Helix-turn-helix domain
CH43_1208	PF00300	Histidine phosphatase superfamily (branch 1)
CH43_121	PF02558	Ketopantoate reductase PanE/ApbA
CH43_121	PF08546	Ketopantoate reductase PanE/ApbA C terminal
CH43_1210	PF05981	CH43_1210
CH43_1211	PF00072	Response regulator receiver domain
CH43_1211	PF00486	Transcriptional regulatory protein, C terminal
CH43_1213	PF00696	Amino acid kinase family
CH43_1213	PF00742	Homoserine dehydrogenase
CH43_1213	PF01842	ACT domain
CH43_1213	PF03447	Homoserine dehydrogenase, NAD binding domain
CH43_1213	PF13840	ACT domain
CH43_1214	PF00288	GHMP kinases N terminal domain
CH43_1214	PF08544	GHMP kinases C terminal
CH43_1215	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_1215	PF14821	Threonine synthase N terminus
CH43_1217	PF03883	CH43_1217
CH43_1218	PF00923	Transaldolase
CH43_1219	PF00994	Probable molybdopterin binding domain
CH43_122	PF01965	DJ-1/PfpI family
CH43_1220	PF07690	Major Facilitator Superfamily
CH43_1222	PF01184	CH43_1222
CH43_1223	PF00012	Hsp70 protein
CH43_1224	PF00226	DnaJ domain
CH43_1224	PF00684	DnaJ central domain
CH43_1224	PF01556	DnaJ C terminal domain
CH43_1225	PF06965	Na+/H+ antiporter 1
CH43_1226	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1226	PF03466	LysR substrate binding domain
CH43_1227	PF01649	Ribosomal protein S20
CH43_1228	PF01687	Riboflavin kinase
CH43_1228	PF06574	FAD synthetase
CH43_1229	PF00133	tRNA synthetases class I (I, L, M and V)
CH43_1229	PF06827	Zinc finger found in FPG and IleRS
CH43_1229	PF08264	Anticodon-binding domain of tRNA
CH43_123	PF02568	Thiamine biosynthesis protein (ThiI)
CH43_123	PF02926	THUMP domain
CH43_1230	PF01252	CH43_1230
CH43_1231	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CH43_1232	PF02401	LytB protein
CH43_1233	PF01113	Dihydrodipicolinate reductase, N-terminus
CH43_1233	PF05173	Dihydrodipicolinate reductase, C-terminus
CH43_1234	PF00117	Glutamine amidotransferase class-I
CH43_1234	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CH43_1235	PF02142	MGS-like domain
CH43_1235	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CH43_1235	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CH43_1236	PF01810	CH43_1236
CH43_1237	PF06738	CH43_1237
CH43_1238	PF12821	CH43_1238
CH43_1239	PF00186	Dihydrofolate reductase
CH43_124	PF02609	Exonuclease VII small subunit
CH43_1240	PF12582	CH43_1240
CH43_1241	PF00149	Calcineurin-like phosphoesterase
CH43_1242	PF04379	Protein of unknown function (DUF525)
CH43_1243	PF00398	Ribosomal RNA adenine dimethylase
CH43_1244	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
CH43_1245	PF00639	PPIC-type PPIASE domain
CH43_1245	PF09312	SurA N-terminal domain
CH43_1246	PF03968	OstA-like protein
CH43_1246	PF04453	Organic solvent tolerance protein
CH43_1247	PF00226	DnaJ domain
CH43_1247	PF05099	Tellurite resistance protein TerB
CH43_1248	PF00849	RNA pseudouridylate synthase
CH43_1249	PF10074	CH43_1249
CH43_125	PF00348	Polyprenyl synthetase
CH43_1250	PF06812	CH43_1250
CH43_1251	PF05591	CH43_1251
CH43_1252	PF05943	CH43_1252
CH43_1253	PF05638	Protein of unknown function (DUF796)
CH43_1254	PF04965	Gene 25-like lysozyme
CH43_1255	PF05947	CH43_1255
CH43_1256	PF06996	CH43_1256
CH43_1257	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_1257	PF02861	Clp amino terminal domain
CH43_1257	PF07724	AAA domain (Cdc48 subfamily)
CH43_1258	PF05954	Phage late control gene D protein (GPD)
CH43_1259	PF09937	CH43_1259
CH43_1259	PF13599	Pentapeptide repeats (9 copies)
CH43_126	PF02779	Transketolase, pyrimidine binding domain
CH43_126	PF02780	Transketolase, C-terminal domain
CH43_126	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
CH43_1260	PF00805	Pentapeptide repeats (8 copies)
CH43_1260	PF13599	Pentapeptide repeats (9 copies)
CH43_1261	PF12059	CH43_1261
CH43_1262	PF13665	CH43_1262
CH43_1263	PF12790	Type VI secretion lipoprotein
CH43_1264	PF05936	CH43_1264
CH43_1265	PF00691	OmpA family
CH43_1265	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
CH43_1266	PF06744	CH43_1266
CH43_1266	PF06761	CH43_1266
CH43_1266	PF14331	CH43_1266
CH43_1268	PF00176	SNF2 family N-terminal domain
CH43_1268	PF00271	Helicase conserved C-terminal domain
CH43_1268	PF12137	RNA polymerase recycling family C-terminal
CH43_1269	PF00136	DNA polymerase family B
CH43_1269	PF03104	DNA polymerase family B, exonuclease domain
CH43_127	PF01797	Transposase IS200 like
CH43_1270	PF09335	CH43_1270
CH43_1271	PF00005	ABC transporter
CH43_1272	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1273	PF13343	Bacterial extracellular solute-binding protein
CH43_1275	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_1275	PF12793	CH43_1275
CH43_1276	PF07690	Major Facilitator Superfamily
CH43_1277	PF00694	Aconitase C-terminal domain
CH43_1278	PF00330	Aconitase family (aconitate hydratase)
CH43_1279	PF00180	Isocitrate/isopropylmalate dehydrogenase
CH43_128	PF04608	Phosphatidylglycerophosphatase A
CH43_1280	PF00682	HMGL-like
CH43_1280	PF08502	LeuA allosteric (dimerisation) domain
CH43_1282	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1282	PF03466	LysR substrate binding domain
CH43_1283	PF00501	AMP-binding enzyme
CH43_1284	PF00872	CH43_1284
CH43_1285	PF00205	Thiamine pyrophosphate enzyme, central domain
CH43_1285	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CH43_1285	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CH43_1286	PF01842	ACT domain
CH43_1286	PF10369	Small subunit of acetolactate synthase
CH43_1287	PF01797	Transposase IS200 like
CH43_1288	PF00356	Bacterial regulatory proteins, lacI family
CH43_1288	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CH43_1289	PF01797	Transposase IS200 like
CH43_129	PF00586	AIR synthase related protein, N-terminal domain
CH43_129	PF02769	AIR synthase related protein, C-terminal domain
CH43_1290	PF06610	CH43_1290
CH43_1291	PF02381	MraZ protein
CH43_1292	PF01795	MraW methylase family
CH43_1293	PF04999	CH43_1293
CH43_1294	PF00905	Penicillin binding protein transpeptidase domain
CH43_1294	PF03717	Penicillin-binding Protein dimerisation domain
CH43_1295	PF01225	Mur ligase family, catalytic domain
CH43_1295	PF02875	Mur ligase family, glutamate ligase domain
CH43_1295	PF08245	Mur ligase middle domain
CH43_1296	PF01225	Mur ligase family, catalytic domain
CH43_1296	PF02875	Mur ligase family, glutamate ligase domain
CH43_1296	PF08245	Mur ligase middle domain
CH43_1297	PF00953	Glycosyl transferase family 4
CH43_1297	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
CH43_1298	PF02875	Mur ligase family, glutamate ligase domain
CH43_1298	PF08245	Mur ligase middle domain
CH43_1299	PF01098	CH43_1299
CH43_13	PF01148	Cytidylyltransferase family
CH43_130	PF01029	NusB family
CH43_1300	PF03033	Glycosyltransferase family 28 N-terminal domain
CH43_1300	PF04101	Glycosyltransferase family 28 C-terminal domain
CH43_1301	PF01225	Mur ligase family, catalytic domain
CH43_1301	PF02875	Mur ligase family, glutamate ligase domain
CH43_1301	PF08245	Mur ligase middle domain
CH43_1302	PF01820	D-ala D-ala ligase N-terminus
CH43_1302	PF07478	D-ala D-ala ligase C-terminus
CH43_1303	PF03799	Cell division protein FtsQ
CH43_1303	PF08478	POTRA domain, FtsQ-type
CH43_1304	PF02491	SHS2 domain inserted in FTSA
CH43_1304	PF14450	Cell division protein FtsA
CH43_1305	PF00091	Tubulin/FtsZ family, GTPase domain
CH43_1305	PF12327	FtsZ family, C-terminal domain
CH43_1306	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
CH43_1307	PF05258	CH43_1307
CH43_1308	PF06558	CH43_1308
CH43_1309	PF01043	SecA preprotein cross-linking domain
CH43_1309	PF02810	SEC-C motif
CH43_1309	PF07516	SecA Wing and Scaffold domain
CH43_1309	PF07517	SecA DEAD-like domain
CH43_131	PF00885	6,7-dimethyl-8-ribityllumazine synthase
CH43_1310	PF00293	NUDIX domain
CH43_1311	PF01695	IstB-like ATP binding protein
CH43_1312	PF00665	Integrase core domain
CH43_1312	PF02796	Helix-turn-helix domain of resolvase
CH43_1313	PF03884	Domain of unknown function (DUF329)
CH43_1314	PF07072	Protein of unknown function (DUF1342)
CH43_1315	PF01121	Dephospho-CoA kinase
CH43_1316	PF00478	IMP dehydrogenase / GMP reductase domain
CH43_1317	PF00482	Type II secretion system (T2SS), protein F
CH43_1318	PF00437	Type II/IV secretion system protein
CH43_1319	PF07963	Prokaryotic N-terminal methylation motif
CH43_132	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CH43_132	PF01872	RibD C-terminal domain
CH43_1320	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
CH43_1320	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
CH43_1321	PF01510	N-acetylmuramoyl-L-alanine amidase
CH43_1322	PF17113	CH43_1322
CH43_1323	PF00324	Amino acid permease
CH43_1324	PF00392	Bacterial regulatory proteins, gntR family
CH43_1324	PF07729	FCD domain
CH43_1325	PF00456	Transketolase, thiamine diphosphate binding domain
CH43_1326	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CH43_1326	PF00364	Biotin-requiring enzyme
CH43_1326	PF02817	e3 binding domain
CH43_1327	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CH43_1327	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_1328	PF01797	Transposase IS200 like
CH43_1329	PF00330	Aconitase family (aconitate hydratase)
CH43_1329	PF06434	Aconitate hydratase 2 N-terminus
CH43_1329	PF11791	Aconitate B N-terminal domain
CH43_133	PF03477	ATP cone domain
CH43_1330	PF06062	CH43_1330
CH43_1331	PF00892	EamA-like transporter family
CH43_1332	PF02675	S-adenosylmethionine decarboxylase
CH43_1333	PF01564	Spermine/spermidine synthase
CH43_1333	PF17284	CH43_1333
CH43_1334	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
CH43_1335	PF00394	Multicopper oxidase
CH43_1335	PF07731	Multicopper oxidase
CH43_1335	PF07732	Multicopper oxidase
CH43_1335	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CH43_1336	PF00156	Phosphoribosyl transferase domain
CH43_1337	PF00484	Carbonic anhydrase
CH43_1338	PF00005	ABC transporter
CH43_1339	PF01061	CH43_1339
CH43_1341	PF01522	Polysaccharide deacetylase
CH43_1342	PF02261	Aspartate decarboxylase
CH43_1343	PF02569	Pantoate-beta-alanine ligase
CH43_1344	PF02548	Ketopantoate hydroxymethyltransferase
CH43_1345	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CH43_1346	PF01743	Poly A polymerase head domain
CH43_1346	PF12626	Polymerase A arginine-rich C-terminus
CH43_1346	PF12627	Probable RNA and SrmB- binding site of polymerase A
CH43_1347	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CH43_1348	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CH43_1349	PF03749	Sugar fermentation stimulation protein
CH43_1350	PF02834	LigT like Phosphoesterase
CH43_1351	PF00270	DEAD/DEAH box helicase
CH43_1351	PF00271	Helicase conserved C-terminal domain
CH43_1351	PF04408	Helicase associated domain (HA2)
CH43_1351	PF08482	CH43_1351
CH43_1352	PF00905	Penicillin binding protein transpeptidase domain
CH43_1352	PF00912	Transglycosylase
CH43_1352	PF14812	CH43_1352
CH43_1352	PF14814	Bifunctional transglycosylase second domain
CH43_1353	PF00005	ABC transporter
CH43_1354	PF01497	Periplasmic binding protein
CH43_1355	PF01032	FecCD transport family
CH43_1356	PF00202	Aminotransferase class-III
CH43_1357	PF00654	Voltage gated chloride channel
CH43_1358	PF01521	Iron-sulphur cluster biosynthesis
CH43_1359	PF03458	CH43_1359
CH43_136	PF01797	Transposase IS200 like
CH43_1360	PF01497	Periplasmic binding protein
CH43_1361	PF01048	Phosphorylase superfamily
CH43_1362	PF01966	HD domain
CH43_1362	PF13286	Phosphohydrolase-associated domain
CH43_1363	PF00595	PDZ domain (Also known as DHR or GLGF)
CH43_1363	PF13180	PDZ domain
CH43_1363	PF13365	Trypsin-like peptidase domain
CH43_1364	PF00072	Response regulator receiver domain
CH43_1364	PF00512	His Kinase A (phospho-acceptor) domain
CH43_1364	PF01627	Hpt domain
CH43_1364	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_1364	PF09984	CH43_1364
CH43_1365	PF02824	TGS domain
CH43_1365	PF04607	Region found in RelA / SpoT proteins
CH43_1365	PF13291	ACT domain
CH43_1365	PF13328	HD domain
CH43_1366	PF03819	MazG nucleotide pyrophosphohydrolase domain
CH43_1367	PF00117	Glutamine amidotransferase class-I
CH43_1367	PF06418	CTP synthase N-terminus
CH43_1368	PF00113	Enolase, C-terminal TIM barrel domain
CH43_1368	PF03952	Enolase, N-terminal domain
CH43_1369	PF00080	Copper/zinc superoxide dismutase (SODC)
CH43_137	PF02355	Protein export membrane protein
CH43_137	PF07549	SecD/SecF GG Motif
CH43_1370	PF04055	Radical SAM superfamily
CH43_1370	PF13394	4Fe-4S single cluster domain
CH43_1371	PF01242	6-pyruvoyl tetrahydropterin synthase
CH43_1372	PF00175	Oxidoreductase NAD-binding domain
CH43_1372	PF00258	Flavodoxin
CH43_1372	PF00667	FAD binding domain
CH43_1373	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CH43_1373	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CH43_1374	PF01507	Phosphoadenosine phosphosulfate reductase family
CH43_1375	PF01507	Phosphoadenosine phosphosulfate reductase family
CH43_1376	PF15919	CH43_1376
CH43_1377	PF07927	YcfA-like protein
CH43_1379	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CH43_1379	PF10414	Sirohaem synthase dimerisation region
CH43_1379	PF13241	Putative NAD(P)-binding
CH43_1379	PF14824	Sirohaem biosynthesis protein central
CH43_138	PF02355	Protein export membrane protein
CH43_138	PF07549	SecD/SecF GG Motif
CH43_138	PF13721	SecD export protein N-terminal TM region
CH43_1380	PF01507	Phosphoadenosine phosphosulfate reductase family
CH43_1381	PF00009	Elongation factor Tu GTP binding domain
CH43_1382	PF01583	Adenylylsulphate kinase
CH43_1383	PF12084	CH43_1383
CH43_1384	PF04977	Septum formation initiator
CH43_1385	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CH43_1386	PF02542	YgbB family
CH43_1387	PF01142	tRNA pseudouridine synthase D (TruD)
CH43_1388	PF01975	Survival protein SurE
CH43_1389	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
CH43_139	PF02699	Preprotein translocase subunit
CH43_1390	PF01476	LysM domain
CH43_1390	PF01551	Peptidase family M23
CH43_1391	PF00140	Sigma-70 factor, region 1
CH43_1391	PF04539	Sigma-70 region 3
CH43_1391	PF04542	Sigma-70 region 2
CH43_1391	PF04545	Sigma-70, region 4
CH43_1392	PF00488	MutS domain V
CH43_1392	PF01624	MutS domain I
CH43_1392	PF05188	MutS domain II
CH43_1392	PF05190	MutS family domain IV
CH43_1392	PF05192	MutS domain III
CH43_1393	PF02502	Ribose/Galactose Isomerase
CH43_1394	PF00107	Zinc-binding dehydrogenase
CH43_1394	PF08240	Alcohol dehydrogenase GroES-like domain
CH43_1395	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_1396	PF02733	Dak1 domain
CH43_1397	PF02734	DAK2 domain
CH43_1398	PF04198	Putative sugar-binding domain
CH43_1398	PF13518	Helix-turn-helix domain
CH43_1399	PF02040	CH43_1399
CH43_14	PF01066	CDP-alcohol phosphatidyltransferase
CH43_140	PF01702	Queuine tRNA-ribosyltransferase
CH43_1400	PF01022	Bacterial regulatory protein, arsR family
CH43_1401	PF04703	FaeA-like protein
CH43_1403	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_1404	PF00034	Cytochrome c
CH43_1404	PF03150	Di-haem cytochrome c peroxidase
CH43_1404	PF14376	CH43_1404
CH43_1406	PF00593	TonB dependent receptor
CH43_1406	PF07715	TonB-dependent Receptor Plug Domain
CH43_1407	PF07906	CH43_1407
CH43_1408	PF00557	Metallopeptidase family M24
CH43_1409	PF11903	CH43_1409
CH43_141	PF02547	Queuosine biosynthesis protein
CH43_1410	PF05681	CH43_1410
CH43_1410	PF05683	Fumarase C-terminus
CH43_1411	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_1411	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_1412	PF01261	Xylose isomerase-like TIM barrel
CH43_1413	PF02653	CH43_1413
CH43_1414	PF02653	CH43_1414
CH43_1415	PF00005	ABC transporter
CH43_1416	PF13407	Periplasmic binding protein domain
CH43_1417	PF00455	CH43_1417
CH43_1417	PF08220	DeoR-like helix-turn-helix domain
CH43_1418	PF00596	Class II Aldolase and Adducin N-terminal domain
CH43_1419	PF00384	Molybdopterin oxidoreductase
CH43_1419	PF01568	Molydopterin dinucleotide binding domain
CH43_1419	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CH43_142	PF04336	CH43_142
CH43_1420	PF12800	4Fe-4S binding domain
CH43_1420	PF13247	4Fe-4S dicluster domain
CH43_1421	PF04976	CH43_1421
CH43_1422	PF02613	Nitrate reductase delta subunit
CH43_1423	PF01292	Prokaryotic cytochrome b561
CH43_1424	PF07361	Cytochrome b562
CH43_1425	PF00141	Peroxidase
CH43_1426	PF13407	Periplasmic binding protein domain
CH43_1427	PF10054	Predicted periplasmic lipoprotein (DUF2291)
CH43_1428	PF00005	ABC transporter
CH43_1429	PF02653	CH43_1429
CH43_143	PF00578	AhpC/TSA family
CH43_143	PF10417	C-terminal domain of 1-Cys peroxiredoxin
CH43_1430	PF00456	Transketolase, thiamine diphosphate binding domain
CH43_1431	PF02779	Transketolase, pyrimidine binding domain
CH43_1431	PF02780	Transketolase, C-terminal domain
CH43_1432	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_1432	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_1433	PF02952	L-fucose isomerase, C-terminal domain
CH43_1434	PF01047	MarR family
CH43_1434	PF04198	Putative sugar-binding domain
CH43_1435	PF07690	Major Facilitator Superfamily
CH43_1436	PF02464	Competence-damaged protein
CH43_1437	PF00154	recA bacterial DNA recombination protein
CH43_1438	PF02631	RecX family
CH43_1439	PF01411	tRNA synthetases class II (A)
CH43_1439	PF02272	DHHA1 domain
CH43_1439	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CH43_144	PF01019	Gamma-glutamyltranspeptidase
CH43_1440	PF02599	Global regulator protein family
CH43_1444	PF13419	Haloacid dehalogenase-like hydrolase
CH43_1446	PF04262	Glutamate-cysteine ligase
CH43_1447	PF02664	S-Ribosylhomocysteinase (LuxS)
CH43_1448	PF00571	CBS domain
CH43_1448	PF01595	CH43_1448
CH43_1448	PF03471	Transporter associated domain
CH43_1449	PF01578	CH43_1449
CH43_145	PF01019	Gamma-glutamyltranspeptidase
CH43_1450	PF00448	SRP54-type protein, GTPase domain
CH43_1450	PF02881	SRP54-type protein, helical bundle domain
CH43_1450	PF02978	Signal peptide binding domain
CH43_1451	PF00886	Ribosomal protein S16
CH43_1452	PF01782	RimM N-terminal domain
CH43_1452	PF05239	PRC-barrel domain
CH43_1453	PF01746	tRNA (Guanine-1)-methyltransferase
CH43_1454	PF01245	Ribosomal protein L19
CH43_1455	PF04338	Protein of unknown function, DUF481
CH43_1456	PF03605	CH43_1456
CH43_1457	PF03605	CH43_1457
CH43_1458	PF00072	Response regulator receiver domain
CH43_1458	PF04397	LytTr DNA-binding domain
CH43_1459	PF00793	DAHP synthetase I family
CH43_146	PF00106	short chain dehydrogenase
CH43_1460	PF00665	Integrase core domain
CH43_1460	PF02796	Helix-turn-helix domain of resolvase
CH43_1461	PF01695	IstB-like ATP binding protein
CH43_1462	PF00793	DAHP synthetase I family
CH43_1463	PF01817	Chorismate mutase type II
CH43_1463	PF02153	Prephenate dehydrogenase
CH43_1464	PF00800	Prephenate dehydratase
CH43_1464	PF01817	Chorismate mutase type II
CH43_1465	PF01797	Transposase IS200 like
CH43_1466	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CH43_1467	PF13525	Outer membrane lipoprotein
CH43_1468	PF00849	RNA pseudouridylate synthase
CH43_1468	PF01479	S4 domain
CH43_1469	PF02578	Multi-copper polyphenol oxidoreductase laccase
CH43_147	PF00128	Alpha amylase, catalytic domain
CH43_147	PF02903	Alpha amylase, N-terminal ig-like domain
CH43_1470	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_1470	PF02861	Clp amino terminal domain
CH43_1470	PF07724	AAA domain (Cdc48 subfamily)
CH43_1470	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_148	PF00324	Amino acid permease
CH43_1480	PF04204	Homoserine O-succinyltransferase
CH43_1481	PF01274	Malate synthase
CH43_1482	PF00463	Isocitrate lyase family
CH43_1483	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
CH43_1484	PF01614	Bacterial transcriptional regulator
CH43_1484	PF09339	IclR helix-turn-helix domain
CH43_1485	PF00809	Pterin binding enzyme
CH43_1485	PF02310	B12 binding domain
CH43_1485	PF02574	Homocysteine S-methyltransferase
CH43_1485	PF02607	B12 binding domain
CH43_1485	PF02965	Vitamin B12 dependent methionine synthase, activation domain
CH43_1488	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
CH43_1488	PF08479	POTRA domain, ShlB-type
CH43_1488	PF17287	CH43_1488
CH43_1489	PF00696	Amino acid kinase family
CH43_149	PF05525	CH43_149
CH43_1490	PF00342	Phosphoglucose isomerase
CH43_1491	PF06146	CH43_1491
CH43_1492	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1493	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1493	PF14785	Maltose transport system permease protein MalF P2 domain
CH43_1494	PF13416	Bacterial extracellular solute-binding protein
CH43_1496	PF00005	ABC transporter
CH43_1496	PF08402	TOBE domain
CH43_1497	PF02264	LamB porin
CH43_1498	PF07148	CH43_1498
CH43_150	PF12849	PBP superfamily domain
CH43_1500	PF05638	Protein of unknown function (DUF796)
CH43_1501	PF05591	CH43_1501
CH43_1502	PF05943	CH43_1502
CH43_1503	PF04965	Gene 25-like lysozyme
CH43_1504	PF00665	Integrase core domain
CH43_1504	PF13276	CH43_1504
CH43_1505	PF05947	CH43_1505
CH43_1506	PF13518	Helix-turn-helix domain
CH43_1507	PF05947	CH43_1507
CH43_1508	PF06996	CH43_1508
CH43_151	PF00512	His Kinase A (phospho-acceptor) domain
CH43_151	PF00989	PAS fold
CH43_151	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_151	PF11808	CH43_151
CH43_1510	PF12790	Type VI secretion lipoprotein
CH43_1511	PF05936	CH43_1511
CH43_1512	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
CH43_1513	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_1513	PF07724	AAA domain (Cdc48 subfamily)
CH43_1513	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_1514	PF02954	Bacterial regulatory protein, Fis family
CH43_1515	PF11319	CH43_1515
CH43_1516	PF06812	CH43_1516
CH43_1516	PF16989	CH43_1516
CH43_1517	PF06744	CH43_1517
CH43_1517	PF06761	CH43_1517
CH43_1517	PF14331	CH43_1517
CH43_1518	PF06812	CH43_1518
CH43_1519	PF12486	CH43_1519
CH43_152	PF00072	Response regulator receiver domain
CH43_152	PF00486	Transcriptional regulatory protein, C terminal
CH43_1520	PF05954	Phage late control gene D protein (GPD)
CH43_1521	PF08786	Domain of unknown function (DUF1795)
CH43_1522	PF05488	PAAR motif
CH43_1522	PF05593	CH43_1522
CH43_1523	PF03527	CH43_1523
CH43_1523	PF14414	CH43_1523
CH43_1524	PF09346	SMI1 / KNR4 family (SUKH-1)
CH43_1526	PF08845	CH43_1526
CH43_1527	PF01381	Helix-turn-helix
CH43_1528	PF12486	CH43_1528
CH43_1529	PF05954	Phage late control gene D protein (GPD)
CH43_153	PF00149	Calcineurin-like phosphoesterase
CH43_153	PF12320	Type 5 capsule protein repressor C-terminal domain
CH43_1530	PF08786	Domain of unknown function (DUF1795)
CH43_1531	PF03527	CH43_1531
CH43_1531	PF05488	PAAR motif
CH43_1531	PF05593	CH43_1531
CH43_1533	PF01261	Xylose isomerase-like TIM barrel
CH43_1534	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_1535	PF02311	AraC-like ligand binding domain
CH43_1535	PF12833	Helix-turn-helix domain
CH43_1536	PF05025	RbsD / FucU transport protein family
CH43_1537	PF00294	pfkB family carbohydrate kinase
CH43_1538	PF01791	DeoC/LacD family aldolase
CH43_1539	PF03358	NADPH-dependent FMN reductase
CH43_154	PF13476	AAA domain
CH43_154	PF13558	Putative exonuclease SbcCD, C subunit
CH43_1540	PF09084	NMT1/THI5 like
CH43_1541	PF00296	Luciferase-like monooxygenase
CH43_1542	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1543	PF00005	ABC transporter
CH43_1544	PF04221	RelB antitoxin
CH43_1545	PF00860	Permease family
CH43_1546	PF00999	Sodium/hydrogen exchanger family
CH43_1548	PF03279	CH43_1548
CH43_1549	PF13407	Periplasmic binding protein domain
CH43_155	PF00480	ROK family
CH43_1550	PF00005	ABC transporter
CH43_1551	PF02653	CH43_1551
CH43_1552	PF02653	CH43_1552
CH43_1553	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_1553	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_1554	PF01380	SIS domain
CH43_1555	PF02798	Glutathione S-transferase, N-terminal domain
CH43_1555	PF13410	Glutathione S-transferase, C-terminal domain
CH43_1556	PF13449	Esterase-like activity of phytase
CH43_1558	PF01797	Transposase IS200 like
CH43_1559	PF00313	'Cold-shock' DNA-binding domain
CH43_156	PF04381	Putative exonuclease, RdgC
CH43_1560	PF00313	'Cold-shock' DNA-binding domain
CH43_1561	PF05433	CH43_1561
CH43_1562	PF00753	Metallo-beta-lactamase superfamily
CH43_1563	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CH43_1563	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
CH43_1564	PF02627	Carboxymuconolactone decarboxylase family
CH43_1565	PF07690	Major Facilitator Superfamily
CH43_1566	PF00392	Bacterial regulatory proteins, gntR family
CH43_1566	PF07729	FCD domain
CH43_1568	PF02954	Bacterial regulatory protein, Fis family
CH43_1569	PF01207	Dihydrouridine synthase (Dus)
CH43_157	PF06865	Protein of unknown function (DUF1255)
CH43_1570	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
CH43_1571	PF00474	Sodium:solute symporter family
CH43_1572	PF06196	CH43_1572
CH43_1574	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
CH43_1574	PF02785	Biotin carboxylase C-terminal domain
CH43_1574	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CH43_1575	PF00364	Biotin-requiring enzyme
CH43_1576	PF01220	Dehydroquinase class II
CH43_1577	PF01794	CH43_1577
CH43_1578	PF00174	Oxidoreductase molybdopterin binding domain
CH43_1579	PF00107	Zinc-binding dehydrogenase
CH43_1579	PF08240	Alcohol dehydrogenase GroES-like domain
CH43_158	PF01202	Shikimate kinase
CH43_1580	PF00563	EAL domain
CH43_1580	PF00990	GGDEF domain
CH43_1580	PF17157	CH43_1580
CH43_1581	PF06723	MreB/Mbl protein
CH43_1582	PF04085	rod shape-determining protein MreC
CH43_1583	PF04093	CH43_1583
CH43_1584	PF02545	Maf-like protein
CH43_1585	PF00575	S1 RNA binding domain
CH43_1585	PF10150	Ribonuclease E/G family
CH43_1586	PF13116	CH43_1586
CH43_1586	PF13502	CH43_1586
CH43_1587	PF00795	Carbon-nitrogen hydrolase
CH43_1588	PF01523	Putative modulator of DNA gyrase
CH43_159	PF00398	Ribosomal RNA adenine dimethylase
CH43_1590	PF00782	Dual specificity phosphatase, catalytic domain
CH43_1591	PF10828	CH43_1591
CH43_1592	PF13539	D-alanyl-D-alanine carboxypeptidase
CH43_1593	PF16083	CH43_1593
CH43_1594	PF03534	Salmonella virulence plasmid 65kDa B protein
CH43_1594	PF12255	Insecticide toxin TcdB middle/C-terminal region
CH43_1594	PF12256	Insecticide toxin TcdB middle/N-terminal region
CH43_1596	PF03538	Salmonella virulence plasmid 28
CH43_1597	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1598	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1598	PF03466	LysR substrate binding domain
CH43_1599	PF07869	CH43_1599
CH43_160	PF08241	Methyltransferase domain
CH43_1600	PF13437	HlyD family secretion protein
CH43_1600	PF13533	Biotin-lipoyl like
CH43_1601	PF04632	CH43_1601
CH43_1602	PF00171	Aldehyde dehydrogenase family
CH43_1603	PF00171	Aldehyde dehydrogenase family
CH43_1604	PF00545	ribonuclease
CH43_1605	PF01337	Barstar (barnase inhibitor)
CH43_1606	PF04751	Protein of unknown function (DUF615)
CH43_1607	PF01523	Putative modulator of DNA gyrase
CH43_1609	PF07361	Cytochrome b562
CH43_1610	PF01272	Transcription elongation factor, GreA/GreB, C-term
CH43_1610	PF14760	Rnk N-terminus
CH43_1611	PF00128	Alpha amylase, catalytic domain
CH43_1611	PF11941	Domain of unknown function (DUF3459)
CH43_1612	PF00367	phosphotransferase system, EIIB
CH43_1612	PF02378	Phosphotransferase system, EIIC
CH43_1613	PF00356	Bacterial regulatory proteins, lacI family
CH43_1613	PF13377	Periplasmic binding protein-like domain
CH43_1614	PF16743	CH43_1614
CH43_1615	PF01042	Endoribonuclease L-PSP
CH43_1616	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
CH43_1616	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
CH43_1617	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CH43_1617	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CH43_1618	PF00381	PTS HPr component phosphorylation site
CH43_1619	PF03668	CH43_1619
CH43_162	PF07238	PilZ domain
CH43_162	PF07317	Flagellar regulator YcgR
CH43_1620	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CH43_1621	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CH43_1622	PF00309	CH43_1622
CH43_1622	PF04552	Sigma-54, DNA binding domain
CH43_1622	PF04963	Sigma-54 factor, core binding domain
CH43_1623	PF00005	ABC transporter
CH43_1623	PF12399	Branched-chain amino acid ATP-binding cassette transporter
CH43_1624	PF03968	OstA-like protein
CH43_1625	PF06835	Lipopolysaccharide-assembly, LptC-related
CH43_1626	PF08282	haloacid dehalogenase-like hydrolase
CH43_1627	PF00571	CBS domain
CH43_1627	PF01380	SIS domain
CH43_1628	PF01699	Sodium/calcium exchanger protein
CH43_1629	PF00005	ABC transporter
CH43_163	PF00171	Aldehyde dehydrogenase family
CH43_1630	PF02405	CH43_1630
CH43_1631	PF02470	CH43_1631
CH43_1632	PF05494	Toluene tolerance, Ttg2
CH43_1633	PF13466	STAS domain
CH43_1634	PF01722	BolA-like protein
CH43_1635	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CH43_1636	PF13180	PDZ domain
CH43_1636	PF13365	Trypsin-like peptidase domain
CH43_1637	PF01797	Transposase IS200 like
CH43_1638	PF00595	PDZ domain (Also known as DHR or GLGF)
CH43_1638	PF13180	PDZ domain
CH43_1638	PF13365	Trypsin-like peptidase domain
CH43_1639	PF06295	CH43_1639
CH43_164	PF00696	Amino acid kinase family
CH43_164	PF01472	PUA domain
CH43_1640	PF03969	AFG1-like ATPase
CH43_1641	PF00572	Ribosomal protein L13
CH43_1642	PF00380	Ribosomal protein S9/S16
CH43_1643	PF00043	Glutathione S-transferase, C-terminal domain
CH43_1643	PF02798	Glutathione S-transferase, N-terminal domain
CH43_1644	PF04386	Stringent starvation protein B
CH43_1646	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_1646	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CH43_1647	PF00310	Glutamine amidotransferases class-II
CH43_1647	PF01493	GXGXG motif
CH43_1647	PF01645	Conserved region in glutamate synthase
CH43_1647	PF04898	Glutamate synthase central domain
CH43_1648	PF04055	Radical SAM superfamily
CH43_1648	PF16199	CH43_1648
CH43_1649	PF00072	Response regulator receiver domain
CH43_1649	PF00512	His Kinase A (phospho-acceptor) domain
CH43_1649	PF00989	PAS fold
CH43_1649	PF01627	Hpt domain
CH43_1649	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_165	PF07417	Transcriptional regulator Crl
CH43_1651	PF00912	Transglycosylase
CH43_1652	PF04972	BON domain
CH43_1653	PF13580	SIS domain
CH43_1654	PF02021	Uncharacterised protein family UPF0102
CH43_1655	PF04348	LppC putative lipoprotein
CH43_1656	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CH43_1657	PF02678	Pirin
CH43_1658	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1658	PF03466	LysR substrate binding domain
CH43_1659	PF13409	Glutathione S-transferase, N-terminal domain
CH43_1659	PF13410	Glutathione S-transferase, C-terminal domain
CH43_166	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
CH43_1660	PF07681	CH43_1660
CH43_1661	PF13997	CH43_1661
CH43_1662	PF07332	CH43_1662
CH43_1663	PF05957	CH43_1663
CH43_1664	PF06476	CH43_1664
CH43_1665	PF13721	SecD export protein N-terminal TM region
CH43_1666	PF09335	CH43_1666
CH43_1668	PF00392	Bacterial regulatory proteins, gntR family
CH43_1668	PF07729	FCD domain
CH43_167	PF00156	Phosphoribosyl transferase domain
CH43_1671	PF02614	Glucuronate isomerase
CH43_1672	PF01232	Mannitol dehydrogenase Rossmann domain
CH43_1672	PF08125	Mannitol dehydrogenase C-terminal domain
CH43_1673	PF04295	CH43_1673
CH43_1673	PF08666	SAF domain
CH43_1674	PF10688	CH43_1674
CH43_1675	PF01797	Transposase IS200 like
CH43_1677	PF00375	Sodium:dicarboxylate symporter family
CH43_1678	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_1679	PF01863	Protein of unknown function DUF45
CH43_168	PF16083	CH43_168
CH43_1680	PF03212	Pertactin
CH43_1680	PF03797	Autotransporter beta-domain
CH43_1681	PF05175	Methyltransferase small domain
CH43_1682	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CH43_1682	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_1683	PF03729	CH43_1683
CH43_1684	PF00069	Protein kinase domain
CH43_1685	PF13672	Protein phosphatase 2C
CH43_1686	PF00092	von Willebrand factor type A domain
CH43_1686	PF15616	CH43_1686
CH43_1687	PF00092	von Willebrand factor type A domain
CH43_1688	PF02342	TerD domain
CH43_1689	PF00092	von Willebrand factor type A domain
CH43_169	PF03067	Chitin binding domain
CH43_1690	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
CH43_1690	PF08479	POTRA domain, ShlB-type
CH43_1690	PF17287	CH43_1690
CH43_1691	PF04829	CH43_1691
CH43_1691	PF05860	haemagglutination activity domain
CH43_1691	PF13018	CH43_1691
CH43_1691	PF13332	CH43_1691
CH43_1694	PF15599	CH43_1694
CH43_1696	PF03797	Autotransporter beta-domain
CH43_1697	PF13557	CH43_1697
CH43_1698	PF10091	Putative glucoamylase
CH43_1699	PF00005	ABC transporter
CH43_1699	PF08402	TOBE domain
CH43_1701	PF00356	Bacterial regulatory proteins, lacI family
CH43_1701	PF13377	Periplasmic binding protein-like domain
CH43_1702	PF01547	Bacterial extracellular solute-binding protein
CH43_1703	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1704	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1706	PF00933	Glycosyl hydrolase family 3 N terminal domain
CH43_1706	PF01915	Glycosyl hydrolase family 3 C-terminal domain
CH43_1706	PF14310	Fibronectin type III-like domain
CH43_1707	PF02321	Outer membrane efflux protein
CH43_1708	PF04632	CH43_1708
CH43_1709	PF13437	HlyD family secretion protein
CH43_1709	PF13533	Biotin-lipoyl like
CH43_171	PF01546	Peptidase family M20/M25/M40
CH43_171	PF07687	Peptidase dimerisation domain
CH43_1710	PF17090	CH43_1710
CH43_1712	PF00155	Aminotransferase class I and II
CH43_1713	PF03553	CH43_1713
CH43_1714	PF10604	Polyketide cyclase / dehydrase and lipid transport
CH43_1715	PF08348	CH43_1715
CH43_1716	PF01042	Endoribonuclease L-PSP
CH43_1717	PF01042	Endoribonuclease L-PSP
CH43_1718	PF08803	Putative mono-oxygenase ydhR
CH43_172	PF00817	impB/mucB/samB family
CH43_172	PF11798	IMS family HHH motif
CH43_172	PF11799	impB/mucB/samB family C-terminal domain
CH43_1720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1720	PF03466	LysR substrate binding domain
CH43_1721	PF01695	IstB-like ATP binding protein
CH43_1722	PF01695	IstB-like ATP binding protein
CH43_1723	PF00665	Integrase core domain
CH43_1723	PF02796	Helix-turn-helix domain of resolvase
CH43_1726	PF02661	Fic/DOC family
CH43_173	PF03009	Glycerophosphoryl diester phosphodiesterase family
CH43_1731	PF03592	Terminase small subunit
CH43_1734	PF00140	Sigma-70 factor, region 1
CH43_1734	PF03979	Sigma-70 factor, region 1
CH43_1734	PF04539	Sigma-70 region 3
CH43_1734	PF04542	Sigma-70 region 2
CH43_1734	PF04545	Sigma-70, region 4
CH43_1734	PF04546	Sigma-70, non-essential region
CH43_1735	PF01807	CHC2 zinc finger
CH43_1735	PF08275	DNA primase catalytic core, N-terminal domain
CH43_1735	PF08278	DNA primase DnaG DnaB-binding
CH43_1735	PF10410	DnaB-helicase binding domain of primase
CH43_1735	PF13155	Toprim-like
CH43_1736	PF01165	Ribosomal protein S21
CH43_1737	PF00814	Glycoprotease family
CH43_1738	PF02660	CH43_1738
CH43_1739	PF02152	Dihydroneopterin aldolase
CH43_174	PF04400	CH43_174
CH43_1740	PF02673	CH43_1740
CH43_1741	PF01743	Poly A polymerase head domain
CH43_1741	PF01966	HD domain
CH43_1741	PF12627	Probable RNA and SrmB- binding site of polymerase A
CH43_1742	PF08239	Bacterial SH3 domain
CH43_1743	PF01928	CYTH domain
CH43_1744	PF03710	Glutamate-ammonia ligase adenylyltransferase
CH43_1744	PF08335	GlnD PII-uridylyltransferase
CH43_1745	PF00294	pfkB family carbohydrate kinase
CH43_1745	PF01467	Cytidylyltransferase
CH43_1746	PF13520	Amino acid permease
CH43_1747	PF04380	CH43_1747
CH43_1749	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CH43_175	PF02424	ApbE family
CH43_1750	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
CH43_1751	PF03738	Glutathionylspermidine synthase preATP-grasp
CH43_1752	PF06693	CH43_1752
CH43_1754	PF02321	Outer membrane efflux protein
CH43_1755	PF00293	NUDIX domain
CH43_1756	PF06853	CH43_1756
CH43_1757	PF00149	Calcineurin-like phosphoesterase
CH43_1758	PF05728	Uncharacterised protein family (UPF0227)
CH43_1759	PF00204	DNA gyrase B
CH43_1759	PF00986	DNA gyrase B subunit, carboxyl terminus
CH43_1759	PF01751	Toprim domain
CH43_1759	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_176	PF00111	2Fe-2S iron-sulfur cluster binding domain
CH43_176	PF00175	Oxidoreductase NAD-binding domain
CH43_176	PF00970	Oxidoreductase FAD-binding domain
CH43_1760	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1760	PF03466	LysR substrate binding domain
CH43_1761	PF02525	Flavodoxin-like fold
CH43_1762	PF00521	DNA gyrase/topoisomerase IV, subunit A
CH43_1762	PF03989	DNA gyrase C-terminal domain, beta-propeller
CH43_1763	PF01553	Acyltransferase
CH43_1764	PF07731	Multicopper oxidase
CH43_1764	PF07732	Multicopper oxidase
CH43_1765	PF04055	Radical SAM superfamily
CH43_1765	PF08497	CH43_1765
CH43_1766	PF11842	CH43_1766
CH43_1767	PF00248	Aldo/keto reductase family
CH43_1768	PF00465	Iron-containing alcohol dehydrogenase
CH43_1769	PF06719	CH43_1769
CH43_1769	PF12833	Helix-turn-helix domain
CH43_177	PF02508	CH43_177
CH43_1770	PF09335	CH43_1770
CH43_1771	PF01053	Cys/Met metabolism PLP-dependent enzyme
CH43_1772	PF01618	CH43_1772
CH43_1774	PF02472	Biopolymer transport protein ExbD/TolR
CH43_1776	PF16964	CH43_1776
CH43_1777	PF07811	CH43_1777
CH43_1779	PF00482	Type II secretion system (T2SS), protein F
CH43_178	PF02508	CH43_178
CH43_1780	PF00482	Type II secretion system (T2SS), protein F
CH43_1781	PF00437	Type II/IV secretion system protein
CH43_1784	PF00263	CH43_1784
CH43_1785	PF13629	CH43_1785
CH43_1787	PF01478	Type IV leader peptidase family
CH43_1788	PF01797	Transposase IS200 like
CH43_1789	PF00577	Outer membrane usher protein
CH43_1789	PF13953	PapC C-terminal domain
CH43_1789	PF13954	PapC N-terminal domain
CH43_179	PF04205	FMN-binding domain
CH43_1790	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_1790	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_1793	PF01497	Periplasmic binding protein
CH43_1795	PF11153	CH43_1795
CH43_1796	PF00771	FHIPEP family
CH43_1797	PF01312	FlhB HrpN YscU SpaS Family
CH43_1798	PF01311	CH43_1798
CH43_1799	PF01313	CH43_1799
CH43_180	PF03116	CH43_180
CH43_1800	PF00813	CH43_1800
CH43_1801	PF01052	Surface presentation of antigens (SPOA)
CH43_1802	PF01052	Surface presentation of antigens (SPOA)
CH43_1803	PF00158	Sigma-54 interaction domain
CH43_1803	PF02954	Bacterial regulatory protein, Fis family
CH43_1804	PF02049	CH43_1804
CH43_1805	PF01514	Secretory protein of YscJ/FliF family
CH43_1805	PF08345	CH43_1805
CH43_1806	PF01706	FliG C-terminal domain
CH43_1806	PF14841	FliG middle domain
CH43_1806	PF14842	FliG N-terminal domain
CH43_1807	PF02108	CH43_1807
CH43_1807	PF09811	CH43_1807
CH43_1808	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CH43_1809	PF02050	Flagellar FliJ protein
CH43_181	PF05896	CH43_181
CH43_181	PF11973	CH43_181
CH43_1810	PF05130	FlgN protein
CH43_1811	PF04316	Anti-sigma-28 factor, FlgM
CH43_1812	PF13144	SAF-like
CH43_1813	PF00460	Flagella basal body rod protein
CH43_1814	PF00460	Flagella basal body rod protein
CH43_1814	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_1815	PF03963	CH43_1815
CH43_1815	PF13860	FlgD Ig-like domain
CH43_1815	PF13861	FlgD Tudor-like domain
CH43_1816	PF00460	Flagella basal body rod protein
CH43_1816	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_1816	PF07559	Flagellar basal body protein FlaE
CH43_1817	PF00460	Flagella basal body rod protein
CH43_1817	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_1818	PF00460	Flagella basal body rod protein
CH43_1818	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_1819	PF02107	CH43_1819
CH43_182	PF13230	Glutamine amidotransferases class-II
CH43_1820	PF02119	CH43_1820
CH43_1821	PF10135	CH43_1821
CH43_1822	PF00460	Flagella basal body rod protein
CH43_1822	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_1823	PF00669	Bacterial flagellin N-terminal helical region
CH43_1826	PF00486	Transcriptional regulatory protein, C terminal
CH43_1827	PF00669	Bacterial flagellin N-terminal helical region
CH43_1827	PF00700	Bacterial flagellin C-terminal helical region
CH43_1828	PF00669	Bacterial flagellin N-terminal helical region
CH43_1828	PF00700	Bacterial flagellin C-terminal helical region
CH43_1829	PF00669	Bacterial flagellin N-terminal helical region
CH43_1829	PF00700	Bacterial flagellin C-terminal helical region
CH43_183	PF03734	L,D-transpeptidase catalytic domain
CH43_1830	PF00669	Bacterial flagellin N-terminal helical region
CH43_1830	PF00700	Bacterial flagellin C-terminal helical region
CH43_1831	PF02465	CH43_1831
CH43_1831	PF07195	CH43_1831
CH43_1831	PF07196	Flagellin hook IN motif
CH43_1832	PF02561	Flagellar protein FliS
CH43_1834	PF02120	Flagellar hook-length control protein FliK
CH43_1835	PF03748	CH43_1835
CH43_1836	PF04539	Sigma-70 region 3
CH43_1836	PF04542	Sigma-70 region 2
CH43_1836	PF04545	Sigma-70, region 4
CH43_1837	PF01618	CH43_1837
CH43_1838	PF00691	OmpA family
CH43_1838	PF13677	CH43_1838
CH43_184	PF13580	SIS domain
CH43_1841	PF05656	CH43_1841
CH43_1842	PF05433	CH43_1842
CH43_1843	PF13518	Helix-turn-helix domain
CH43_1845	PF00665	Integrase core domain
CH43_1845	PF13276	CH43_1845
CH43_1846	PF13347	MFS/sugar transport protein
CH43_1847	PF00593	TonB dependent receptor
CH43_1847	PF07715	TonB-dependent Receptor Plug Domain
CH43_1848	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
CH43_1849	PF04183	IucA / IucC family
CH43_1849	PF06276	Ferric iron reductase FhuF-like transporter
CH43_185	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CH43_185	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CH43_185	PF09317	CH43_185
CH43_1850	PF13523	Acetyltransferase (GNAT) domain
CH43_1851	PF04183	IucA / IucC family
CH43_1851	PF06276	Ferric iron reductase FhuF-like transporter
CH43_1852	PF04183	IucA / IucC family
CH43_1853	PF07690	Major Facilitator Superfamily
CH43_1854	PF00775	Dioxygenase
CH43_1855	PF10503	Esterase PHB depolymerase
CH43_1856	PF00765	Autoinducer synthetase
CH43_1857	PF00196	Bacterial regulatory proteins, luxR family
CH43_1857	PF03472	Autoinducer binding domain
CH43_1859	PF02517	CAAX protease self-immunity
CH43_186	PF01797	Transposase IS200 like
CH43_1861	PF03811	CH43_1861
CH43_1861	PF12759	CH43_1861
CH43_1864	PF05591	CH43_1864
CH43_1865	PF05943	CH43_1865
CH43_1866	PF05936	CH43_1866
CH43_1867	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
CH43_1868	PF00691	OmpA family
CH43_1869	PF05638	Protein of unknown function (DUF796)
CH43_187	PF03333	Adhesin biosynthesis transcription regulatory protein
CH43_1870	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_1870	PF07724	AAA domain (Cdc48 subfamily)
CH43_1870	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_1871	PF05954	Phage late control gene D protein (GPD)
CH43_1871	PF10106	CH43_1871
CH43_1871	PF13296	CH43_1871
CH43_1872	PF01551	Peptidase family M23
CH43_1874	PF03811	CH43_1874
CH43_1874	PF12759	CH43_1874
CH43_1875	PF03400	CH43_1875
CH43_1876	PF10106	CH43_1876
CH43_1877	PF00589	Phage integrase family
CH43_1879	PF01276	Orn/Lys/Arg decarboxylase, major domain
CH43_1879	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
CH43_1879	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CH43_1880	PF13407	Periplasmic binding protein domain
CH43_1881	PF00005	ABC transporter
CH43_1882	PF02653	CH43_1882
CH43_1883	PF00593	TonB dependent receptor
CH43_1883	PF07715	TonB-dependent Receptor Plug Domain
CH43_1884	PF01497	Periplasmic binding protein
CH43_1885	PF01464	Transglycosylase SLT domain
CH43_1885	PF11873	Domain of unknown function (DUF3393)
CH43_1886	PF04362	Bacterial Fe(2+) trafficking
CH43_1887	PF00633	Helix-hairpin-helix motif
CH43_1887	PF00730	HhH-GPD superfamily base excision DNA repair protein
CH43_1887	PF10576	Iron-sulfur binding domain of endonuclease III
CH43_1887	PF14815	NUDIX domain
CH43_1888	PF02390	Putative methyltransferase
CH43_1889	PF04320	CH43_1889
CH43_189	PF05860	haemagglutination activity domain
CH43_189	PF13018	CH43_189
CH43_1890	PF04960	Glutaminase
CH43_1891	PF11101	CH43_1891
CH43_1892	PF11101	CH43_1892
CH43_1893	PF11713	Peptidase C80 family
CH43_1894	PF04055	Radical SAM superfamily
CH43_1894	PF06969	HemN C-terminal domain
CH43_1895	PF01725	Ham1 family
CH43_1896	PF02594	Uncharacterised ACR, YggU family COG1872
CH43_1897	PF02325	CH43_1897
CH43_1898	PF03807	NADP oxidoreductase coenzyme F420-dependent
CH43_1898	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CH43_1899	PF01168	Alanine racemase, N-terminal domain
CH43_190	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
CH43_190	PF08479	POTRA domain, ShlB-type
CH43_1900	PF00437	Type II/IV secretion system protein
CH43_1901	PF04371	Porphyromonas-type peptidyl-arginine deiminase
CH43_1902	PF00795	Carbon-nitrogen hydrolase
CH43_1903	PF03652	Uncharacterised protein family (UPF0081)
CH43_1904	PF02622	Uncharacterized ACR, COG1678
CH43_1905	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
CH43_1905	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
CH43_1906	PF04452	RNA methyltransferase
CH43_1907	PF04231	Endonuclease I
CH43_1908	PF10263	CH43_1908
CH43_1908	PF17283	CH43_1908
CH43_1909	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CH43_1909	PF02772	S-adenosylmethionine synthetase, central domain
CH43_1909	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CH43_191	PF01636	Phosphotransferase enzyme family
CH43_1911	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CH43_1912	PF00355	Rieske [2Fe-2S] domain
CH43_1913	PF01435	Peptidase family M48
CH43_1914	PF00456	Transketolase, thiamine diphosphate binding domain
CH43_1914	PF02779	Transketolase, pyrimidine binding domain
CH43_1914	PF02780	Transketolase, C-terminal domain
CH43_1915	PF01797	Transposase IS200 like
CH43_1916	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CH43_1916	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CH43_1917	PF00162	Phosphoglycerate kinase
CH43_1918	PF01116	Fructose-bisphosphate aldolase class-II
CH43_1919	PF00924	Mechanosensitive ion channel
CH43_1919	PF05552	Conserved TM helix
CH43_192	PF01008	Initiation factor 2 subunit family
CH43_1920	PF01810	CH43_1920
CH43_1921	PF04402	Protein of unknown function (DUF541)
CH43_1922	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_1922	PF03466	LysR substrate binding domain
CH43_1923	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CH43_1924	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CH43_1924	PF01842	ACT domain
CH43_1924	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CH43_1925	PF01797	Transposase IS200 like
CH43_1926	PF01812	5-formyltetrahydrofolate cyclo-ligase family
CH43_1927	PF05164	Cell division protein ZapA
CH43_1928	PF03695	Uncharacterised protein family (UPF0149)
CH43_1929	PF00557	Metallopeptidase family M24
CH43_1929	PF05195	Aminopeptidase P, N-terminal domain
CH43_193	PF03079	ARD/ARD' family
CH43_1930	PF01494	FAD binding domain
CH43_1931	PF01494	FAD binding domain
CH43_1932	PF01571	Aminomethyltransferase folate-binding domain
CH43_1932	PF08669	Glycine cleavage T-protein C-terminal barrel domain
CH43_1933	PF01597	Glycine cleavage H-protein
CH43_1934	PF02347	Glycine cleavage system P-protein
CH43_1935	PF13924	CH43_1935
CH43_1937	PF03895	YadA-like C-terminal region
CH43_1937	PF05658	Head domain of trimeric autotransporter adhesin
CH43_1937	PF05662	Coiled stalk of trimeric autotransporter adhesin
CH43_1939	PF03006	CH43_1939
CH43_1940	PF09933	CH43_1940
CH43_1941	PF01571	Aminomethyltransferase folate-binding domain
CH43_1942	PF03937	Flavinator of succinate dehydrogenase
CH43_1943	PF00072	Response regulator receiver domain
CH43_1943	PF00486	Transcriptional regulatory protein, C terminal
CH43_1944	PF00512	His Kinase A (phospho-acceptor) domain
CH43_1944	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_1944	PF14827	Sensory domain of two-component sensor kinase
CH43_1945	PF06123	CH43_1945
CH43_1946	PF00258	Flavodoxin
CH43_1947	PF00589	Phage integrase family
CH43_1947	PF02899	Phage integrase, N-terminal SAM-like domain
CH43_1948	PF10411	Disulfide bond isomerase protein N-terminus
CH43_1948	PF13098	Thioredoxin-like domain
CH43_1949	PF01368	DHH family
CH43_1949	PF02272	DHHA1 domain
CH43_195	PF00596	Class II Aldolase and Adducin N-terminal domain
CH43_1950	PF00472	RF-1 domain
CH43_1950	PF03462	PCRF domain
CH43_1951	PF00152	tRNA synthetases class II (D, K and N)
CH43_1951	PF01336	OB-fold nucleic acid binding domain
CH43_1953	PF00589	Phage integrase family
CH43_1953	PF13356	Domain of unknown function (DUF4102)
CH43_1955	PF05016	Plasmid stabilisation system protein
CH43_1956	PF01381	Helix-turn-helix
CH43_1957	PF15723	CH43_1957
CH43_1958	PF15731	CH43_1958
CH43_1959	PF03288	Poxvirus D5 protein-like
CH43_1959	PF08273	Zinc-binding domain of primase-helicase
CH43_1959	PF08706	CH43_1959
CH43_1959	PF13362	Toprim domain
CH43_196	PF00155	Aminotransferase class I and II
CH43_1960	PF05973	CH43_1960
CH43_1961	PF05930	Prophage CP4-57 regulatory protein (AlpA)
CH43_1965	PF02661	Fic/DOC family
CH43_1966	PF05488	PAAR motif
CH43_1966	PF06958	S-type Pyocin
CH43_1967	PF14206	CH43_1967
CH43_1969	PF09204	Bacterial self-protective colicin-like immunity
CH43_197	PF00795	Carbon-nitrogen hydrolase
CH43_1971	PF11340	CH43_1971
CH43_1973	PF05488	PAAR motif
CH43_1974	PF12977	Domain of Unknown Function with PDB structure (DUF3861)
CH43_1975	PF03551	Transcriptional regulator PadR-like family
CH43_1976	PF05708	Orthopoxvirus protein of unknown function (DUF830)
CH43_1978	PF13407	Periplasmic binding protein domain
CH43_1979	PF02653	CH43_1979
CH43_198	PF01546	Peptidase family M20/M25/M40
CH43_1980	PF00005	ABC transporter
CH43_1981	PF00005	ABC transporter
CH43_1981	PF08402	TOBE domain
CH43_1982	PF13416	Bacterial extracellular solute-binding protein
CH43_1983	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1984	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_1985	PF07745	Glycosyl hydrolase family 53
CH43_1988	PF00367	phosphotransferase system, EIIB
CH43_1989	PF02264	LamB porin
CH43_1990	PF00356	Bacterial regulatory proteins, lacI family
CH43_1990	PF13377	Periplasmic binding protein-like domain
CH43_1991	PF01055	Glycosyl hydrolases family 31
CH43_1991	PF13802	Galactose mutarotase-like
CH43_1991	PF17137	CH43_1991
CH43_1992	PF07690	Major Facilitator Superfamily
CH43_1993	PF00356	Bacterial regulatory proteins, lacI family
CH43_1993	PF13377	Periplasmic binding protein-like domain
CH43_1994	PF01965	DJ-1/PfpI family
CH43_1996	PF01116	Fructose-bisphosphate aldolase class-II
CH43_1997	PF10022	CH43_1997
CH43_1998	PF00884	Sulfatase
CH43_1999	PF04055	Radical SAM superfamily
CH43_1999	PF13186	Iron-sulfur cluster-binding domain
CH43_20	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CH43_20	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CH43_200	PF00665	Integrase core domain
CH43_200	PF02796	Helix-turn-helix domain of resolvase
CH43_2000	PF07470	Glycosyl Hydrolase Family 88
CH43_2001	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_2002	PF01979	Amidohydrolase family
CH43_2003	PF03610	PTS system fructose IIA component
CH43_2004	PF03613	CH43_2004
CH43_2005	PF03609	CH43_2005
CH43_2006	PF03830	PTS system sorbose subfamily IIB component
CH43_2007	PF01380	SIS domain
CH43_2008	PF08013	Tagatose 6 phosphate kinase
CH43_2009	PF00455	CH43_2009
CH43_2009	PF08220	DeoR-like helix-turn-helix domain
CH43_201	PF01695	IstB-like ATP binding protein
CH43_2010	PF00884	Sulfatase
CH43_2011	PF01797	Transposase IS200 like
CH43_2012	PF00665	Integrase core domain
CH43_2012	PF02796	Helix-turn-helix domain of resolvase
CH43_2013	PF01695	IstB-like ATP binding protein
CH43_2014	PF02278	Polysaccharide lyase family 8, super-sandwich domain
CH43_2014	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
CH43_2014	PF09092	Lyase, N terminal
CH43_2014	PF09093	Lyase, catalytic
CH43_2015	PF03797	Autotransporter beta-domain
CH43_2016	PF16946	CH43_2016
CH43_2018	PF00484	Carbonic anhydrase
CH43_202	PF00266	Aminotransferase class-V
CH43_2020	PF11356	Type IV pilus biogenesis
CH43_2021	PF00263	CH43_2021
CH43_2021	PF03958	Bacterial type II/III secretion system short domain
CH43_2022	PF00437	Type II/IV secretion system protein
CH43_2024	PF00482	Type II secretion system (T2SS), protein F
CH43_2025	PF07963	Prokaryotic N-terminal methylation motif
CH43_2025	PF08334	Type II secretion system (T2SS), protein G
CH43_2026	PF07963	Prokaryotic N-terminal methylation motif
CH43_2027	PF02501	Type II secretion system (T2SS), protein I
CH43_2028	PF07963	Prokaryotic N-terminal methylation motif
CH43_2028	PF11612	Type II secretion system (T2SS), protein J
CH43_2029	PF03934	Type II secretion system (T2SS), protein K
CH43_203	PF00005	ABC transporter
CH43_2030	PF05134	Type II secretion system (T2SS), protein L
CH43_2030	PF12693	GspL periplasmic domain
CH43_2032	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
CH43_2033	PF01478	Type IV leader peptidase family
CH43_2033	PF06750	CH43_2033
CH43_2034	PF00486	Transcriptional regulatory protein, C terminal
CH43_2035	PF00872	CH43_2035
CH43_2036	PF00872	CH43_2036
CH43_2039	PF01323	DSBA-like thioredoxin domain
CH43_204	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2040	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_2040	PF02203	Tar ligand binding domain homologue
CH43_2041	PF00753	Metallo-beta-lactamase superfamily
CH43_2042	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2042	PF03466	LysR substrate binding domain
CH43_2043	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2043	PF03466	LysR substrate binding domain
CH43_2044	PF07690	Major Facilitator Superfamily
CH43_2045	PF00356	Bacterial regulatory proteins, lacI family
CH43_2045	PF13377	Periplasmic binding protein-like domain
CH43_2046	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CH43_2046	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CH43_2047	PF00384	Molybdopterin oxidoreductase
CH43_2047	PF01568	Molydopterin dinucleotide binding domain
CH43_2048	PF00501	AMP-binding enzyme
CH43_2048	PF01553	Acyltransferase
CH43_2048	PF13193	AMP-binding enzyme C-terminal domain
CH43_2049	PF07690	Major Facilitator Superfamily
CH43_205	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2052	PF00248	Aldo/keto reductase family
CH43_2053	PF02976	DNA mismatch repair enzyme MutH
CH43_2054	PF00293	NUDIX domain
CH43_2055	PF00391	PEP-utilising enzyme, mobile domain
CH43_2055	PF01590	GAF domain
CH43_2055	PF02896	PEP-utilising enzyme, TIM barrel domain
CH43_2055	PF05524	PEP-utilising enzyme, N-terminal
CH43_2056	PF01790	CH43_2056
CH43_2057	PF00303	Thymidylate synthase
CH43_2059	PF07963	Prokaryotic N-terminal methylation motif
CH43_206	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_2061	PF10713	CH43_2061
CH43_2062	PF07963	Prokaryotic N-terminal methylation motif
CH43_2062	PF12528	CH43_2062
CH43_2063	PF04257	Exodeoxyribonuclease V, gamma subunit
CH43_2064	PF00675	Insulinase (Peptidase family M16)
CH43_2064	PF05193	Peptidase M16 inactive domain
CH43_2064	PF16187	CH43_2064
CH43_2065	PF00580	UvrD/REP helicase N-terminal domain
CH43_2065	PF13361	UvrD-like helicase C-terminal domain
CH43_2066	PF13538	UvrD-like helicase C-terminal domain
CH43_2066	PF13604	AAA domain
CH43_2067	PF00583	Acetyltransferase (GNAT) family
CH43_2067	PF00696	Amino acid kinase family
CH43_2068	PF01695	IstB-like ATP binding protein
CH43_2069	PF00665	Integrase core domain
CH43_2069	PF02796	Helix-turn-helix domain of resolvase
CH43_207	PF01380	SIS domain
CH43_207	PF01418	Helix-turn-helix domain, rpiR family
CH43_2071	PF01520	N-acetylmuramoyl-L-alanine amidase
CH43_2071	PF11741	AMIN domain
CH43_2075	PF03562	MltA specific insert domain
CH43_2075	PF06725	3D domain
CH43_2076	PF00899	ThiF family
CH43_2077	PF02657	Fe-S metabolism associated domain
CH43_2078	PF00266	Aminotransferase class-V
CH43_2079	PF06004	Bacterial protein of unknown function (DUF903)
CH43_208	PF13318	CH43_208
CH43_2080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2080	PF03466	LysR substrate binding domain
CH43_2081	PF04241	CH43_2081
CH43_2082	PF01728	FtsJ-like methyltransferase
CH43_2083	PF01367	5'-3' exonuclease, C-terminal SAM fold
CH43_2083	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CH43_2084	PF03641	Possible lysine decarboxylase
CH43_2084	PF11892	Domain of unknown function (DUF3412)
CH43_2084	PF14793	Domain of unknown function (DUF4478)
CH43_2085	PF14489	QueF-like protein
CH43_2085	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
CH43_2086	PF07348	Syd protein (SUKH-2)
CH43_2087	PF01797	Transposase IS200 like
CH43_2088	PF04287	tRNA pseudouridine synthase C
CH43_2089	PF00849	RNA pseudouridylate synthase
CH43_209	PF01425	Amidase
CH43_2090	PF00258	Flavodoxin
CH43_2091	PF11944	CH43_2091
CH43_2092	PF00132	Bacterial transferase hexapeptide (six repeats)
CH43_2092	PF14602	Hexapeptide repeat of succinyl-transferase
CH43_2092	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
CH43_2093	PF01842	ACT domain
CH43_2093	PF01909	Nucleotidyltransferase domain
CH43_2093	PF01966	HD domain
CH43_2093	PF08335	GlnD PII-uridylyltransferase
CH43_2094	PF00557	Metallopeptidase family M24
CH43_2095	PF00318	Ribosomal protein S2
CH43_2096	PF00889	Elongation factor TS
CH43_2097	PF00696	Amino acid kinase family
CH43_2098	PF01765	Ribosome recycling factor
CH43_2099	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CH43_2099	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
CH43_2099	PF13288	DXP reductoisomerase C-terminal domain
CH43_21	PF13275	S4 domain
CH43_210	PF11533	Protein of unknown function (DUF3225)
CH43_2100	PF01255	Putative undecaprenyl diphosphate synthase
CH43_2101	PF01148	Cytidylyltransferase family
CH43_2102	PF00595	PDZ domain (Also known as DHR or GLGF)
CH43_2102	PF02163	Peptidase family M50
CH43_2103	PF01103	Surface antigen
CH43_2103	PF07244	Surface antigen variable number repeat
CH43_2104	PF03938	Outer membrane protein (OmpH-like)
CH43_2105	PF00132	Bacterial transferase hexapeptide (six repeats)
CH43_2105	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
CH43_2106	PF07977	FabA-like domain
CH43_2107	PF00132	Bacterial transferase hexapeptide (six repeats)
CH43_2107	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
CH43_2108	PF02684	CH43_2108
CH43_2109	PF01351	Ribonuclease HII
CH43_211	PF07690	Major Facilitator Superfamily
CH43_2110	PF01336	OB-fold nucleic acid binding domain
CH43_2110	PF02811	PHP domain
CH43_2110	PF07733	Bacterial DNA polymerase III alpha subunit
CH43_2110	PF14579	Helix-hairpin-helix motif
CH43_2111	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CH43_2112	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CH43_2113	PF01171	PP-loop family
CH43_2113	PF09179	TilS substrate binding domain
CH43_2113	PF11734	TilS substrate C-terminal domain
CH43_2114	PF00034	Cytochrome c
CH43_2115	PF07073	Modulator of Rho-dependent transcription termination (ROF)
CH43_2116	PF06786	CH43_2116
CH43_2117	PF07152	YaeQ protein
CH43_2118	PF00472	RF-1 domain
CH43_2119	PF04170	NlpE N-terminal domain
CH43_2119	PF17185	CH43_2119
CH43_212	PF03591	CH43_212
CH43_2120	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CH43_2120	PF03129	Anticodon binding domain
CH43_2120	PF04073	Aminoacyl-tRNA editing domain
CH43_2121	PF01980	Uncharacterised protein family UPF0066
CH43_2122	PF16358	CH43_2122
CH43_2123	PF03180	NLPA lipoprotein
CH43_2124	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2125	PF00005	ABC transporter
CH43_2125	PF09383	NIL domain
CH43_2126	PF13242	HAD-hyrolase-like
CH43_213	PF05437	CH43_213
CH43_2132	PF00248	Aldo/keto reductase family
CH43_2134	PF03372	Endonuclease/Exonuclease/phosphatase family
CH43_2135	PF01464	Transglycosylase SLT domain
CH43_2135	PF01476	LysM domain
CH43_2136	PF00753	Metallo-beta-lactamase superfamily
CH43_2136	PF16123	CH43_2136
CH43_2137	PF08241	Methyltransferase domain
CH43_2138	PF00075	RNase H
CH43_2139	PF00929	Exonuclease
CH43_214	PF01047	MarR family
CH43_2141	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
CH43_2142	PF01522	Polysaccharide deacetylase
CH43_2143	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CH43_2144	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2145	PF00005	ABC transporter
CH43_2145	PF00571	CBS domain
CH43_2146	PF00268	Ribonucleotide reductase, small chain
CH43_2147	PF00317	Ribonucleotide reductase, all-alpha domain
CH43_2147	PF02867	Ribonucleotide reductase, barrel domain
CH43_2147	PF08343	Ribonucleotide reductase N-terminal
CH43_2148	PF07972	NrdI Flavodoxin like
CH43_2149	PF00462	Glutaredoxin
CH43_215	PF00529	HlyD family secretion protein
CH43_215	PF16576	CH43_215
CH43_2150	PF06392	CH43_2150
CH43_2151	PF09400	Protein of unknown function (DUF2002)
CH43_2152	PF06711	CH43_2152
CH43_2153	PF04899	CH43_2153
CH43_2154	PF00313	'Cold-shock' DNA-binding domain
CH43_2155	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_2156	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2157	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2158	PF00005	ABC transporter
CH43_2159	PF00005	ABC transporter
CH43_216	PF07690	Major Facilitator Superfamily
CH43_2161	PF00547	Urease, gamma subunit
CH43_2162	PF00699	Urease beta subunit
CH43_2163	PF00449	Urease alpha-subunit, N-terminal domain
CH43_2163	PF01979	Amidohydrolase family
CH43_2164	PF02814	UreE urease accessory protein, N-terminal domain
CH43_2164	PF05194	UreE urease accessory protein, C-terminal domain
CH43_2165	PF01730	UreF
CH43_2166	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CH43_2167	PF01774	UreD urease accessory protein
CH43_2168	PF03253	Urea transporter
CH43_2169	PF03824	CH43_2169
CH43_217	PF00588	SpoU rRNA Methylase family
CH43_217	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CH43_2170	PF06411	HdeA/HdeB family
CH43_2171	PF02254	TrkA-N domain
CH43_2171	PF07885	Ion channel
CH43_2172	PF02537	CH43_2172
CH43_2173	PF02537	CH43_2173
CH43_2174	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CH43_2175	PF02378	Phosphotransferase system, EIIC
CH43_2176	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
CH43_2177	PF07883	Cupin domain
CH43_2177	PF12833	Helix-turn-helix domain
CH43_2178	PF04794	YdjC-like protein
CH43_218	PF00085	Thioredoxin
CH43_2181	PF03925	SeqA protein
CH43_2181	PF17206	CH43_2181
CH43_2182	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CH43_2182	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CH43_2182	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CH43_2182	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CH43_2185	PF00892	EamA-like transporter family
CH43_2186	PF00072	Response regulator receiver domain
CH43_2186	PF00486	Transcriptional regulatory protein, C terminal
CH43_2189	PF02669	CH43_2189
CH43_219	PF03942	CH43_219
CH43_2190	PF00122	E1-E2 ATPase
CH43_2190	PF00702	haloacid dehalogenase-like hydrolase
CH43_2191	PF03814	CH43_2191
CH43_2192	PF10725	CH43_2192
CH43_2193	PF08349	CH43_2193
CH43_2194	PF00875	DNA photolyase
CH43_2194	PF03441	FAD binding domain of DNA photolyase
CH43_2195	PF02112	CH43_2195
CH43_2196	PF01784	NIF3 (NGG1p interacting factor 3)
CH43_2198	PF02682	Allophanate hydrolase subunit 1
CH43_2199	PF02626	Allophanate hydrolase subunit 2
CH43_22	PF01797	Transposase IS200 like
CH43_220	PF00583	Acetyltransferase (GNAT) family
CH43_220	PF13380	CoA binding domain
CH43_220	PF13549	ATP-grasp domain
CH43_220	PF13607	Succinyl-CoA ligase like flavodoxin domain
CH43_2200	PF03746	LamB/YcsF family
CH43_2201	PF06149	CH43_2201
CH43_2202	PF06166	CH43_2202
CH43_2203	PF01470	Pyroglutamyl peptidase
CH43_2204	PF03167	Uracil DNA glycosylase superfamily
CH43_2205	PF01228	Glycine radical
CH43_2206	PF11187	Protein of unknown function (DUF2974)
CH43_221	PF13091	PLD-like domain
CH43_2210	PF00270	DEAD/DEAH box helicase
CH43_2210	PF00271	Helicase conserved C-terminal domain
CH43_2211	PF05175	Methyltransferase small domain
CH43_2212	PF00890	FAD binding domain
CH43_2212	PF02910	Fumarate reductase flavoprotein C-term
CH43_2213	PF04542	Sigma-70 region 2
CH43_2213	PF08281	Sigma-70, region 4
CH43_2214	PF03872	Anti sigma-E protein RseA, N-terminal domain
CH43_2214	PF03873	Anti sigma-E protein RseA, C-terminal domain
CH43_2215	PF03888	MucB/RseB family
CH43_2215	PF17188	CH43_2215
CH43_2216	PF04246	CH43_2216
CH43_2218	PF00009	Elongation factor Tu GTP binding domain
CH43_2218	PF00679	Elongation factor G C-terminus
CH43_2218	PF03144	Elongation factor Tu domain 2
CH43_2218	PF06421	GTP-binding protein LepA C-terminus
CH43_2219	PF00717	Peptidase S24-like
CH43_2219	PF10502	Signal peptidase, peptidase S26
CH43_222	PF10043	CH43_222
CH43_2220	PF00035	Double-stranded RNA binding motif
CH43_2220	PF14622	Ribonuclease-III-like
CH43_2221	PF01926	50S ribosome-binding GTPase
CH43_2221	PF07650	KH domain
CH43_2222	PF02565	Recombination protein O C terminal
CH43_2222	PF11967	Recombination protein O N terminal
CH43_2223	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
CH43_2224	PF01648	4'-phosphopantetheinyl transferase superfamily
CH43_2225	PF01797	Transposase IS200 like
CH43_2226	PF00109	Beta-ketoacyl synthase, N-terminal domain
CH43_2226	PF02801	Beta-ketoacyl synthase, C-terminal domain
CH43_2227	PF01695	IstB-like ATP binding protein
CH43_2228	PF00665	Integrase core domain
CH43_2228	PF02796	Helix-turn-helix domain of resolvase
CH43_2229	PF00109	Beta-ketoacyl synthase, N-terminal domain
CH43_2231	PF07977	FabA-like domain
CH43_2232	PF05362	Lon protease (S16) C-terminal proteolytic domain
CH43_2232	PF13654	AAA domain
CH43_2233	PF06303	Organiser of macrodomain of Terminus of chromosome
CH43_2233	PF17414	CH43_2233
CH43_2234	PF01797	Transposase IS200 like
CH43_2235	PF00691	OmpA family
CH43_2235	PF01389	OmpA-like transmembrane domain
CH43_2236	PF03846	Cell division inhibitor SulA
CH43_2237	PF04993	TfoX N-terminal domain
CH43_2237	PF04994	TfoX C-terminal domain
CH43_2238	PF12805	CH43_2238
CH43_2238	PF13515	CH43_2238
CH43_2239	PF03733	CH43_2239
CH43_2240	PF00580	UvrD/REP helicase N-terminal domain
CH43_2240	PF12462	CH43_2240
CH43_2240	PF13361	UvrD-like helicase C-terminal domain
CH43_2241	PF02142	MGS-like domain
CH43_2242	PF09829	CH43_2242
CH43_2243	PF13380	CoA binding domain
CH43_2244	PF08755	Hemimethylated DNA-binding protein YccV like
CH43_2245	PF10672	S-adenosylmethionine-dependent methyltransferase
CH43_2246	PF00708	Acylphosphatase
CH43_2247	PF04358	DsrC like protein
CH43_2249	PF13610	CH43_2249
CH43_2253	PF01565	FAD binding domain
CH43_2253	PF13480	Acetyltransferase (GNAT) domain
CH43_2254	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_2256	PF07977	FabA-like domain
CH43_2257	PF00109	Beta-ketoacyl synthase, N-terminal domain
CH43_2257	PF02801	Beta-ketoacyl synthase, C-terminal domain
CH43_2258	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_2259	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
CH43_2259	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
CH43_2260	PF00378	Enoyl-CoA hydratase/isomerase family
CH43_2261	PF00378	Enoyl-CoA hydratase/isomerase family
CH43_2262	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_2263	PF13924	CH43_2263
CH43_2264	PF00550	Phosphopantetheine attachment site
CH43_2265	PF00698	Acyl transferase domain
CH43_2267	PF05591	CH43_2267
CH43_2268	PF05943	CH43_2268
CH43_2269	PF05936	CH43_2269
CH43_2270	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
CH43_2271	PF00691	OmpA family
CH43_2272	PF05638	Protein of unknown function (DUF796)
CH43_2273	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_2273	PF07724	AAA domain (Cdc48 subfamily)
CH43_2273	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_2274	PF05954	Phage late control gene D protein (GPD)
CH43_2274	PF10106	CH43_2274
CH43_2274	PF13296	CH43_2274
CH43_2275	PF01551	Peptidase family M23
CH43_2277	PF10106	CH43_2277
CH43_2279	PF01551	Peptidase family M23
CH43_228	PF01177	Asp/Glu/Hydantoin racemase
CH43_2282	PF06744	CH43_2282
CH43_2282	PF06761	CH43_2282
CH43_2283	PF06812	CH43_2283
CH43_2283	PF16989	CH43_2283
CH43_2284	PF05488	PAAR motif
CH43_2284	PF15607	CH43_2284
CH43_2286	PF05947	CH43_2286
CH43_2287	PF06996	CH43_2287
CH43_2288	PF12790	Type VI secretion lipoprotein
CH43_2289	PF04965	Gene 25-like lysozyme
CH43_229	PF00593	TonB dependent receptor
CH43_229	PF07715	TonB-dependent Receptor Plug Domain
CH43_2290	PF06812	CH43_2290
CH43_2290	PF12486	CH43_2290
CH43_2291	PF16809	CH43_2291
CH43_2292	PF00005	ABC transporter
CH43_2292	PF12848	ABC transporter
CH43_2293	PF16809	CH43_2293
CH43_2294	PF00899	ThiF family
CH43_2295	PF00994	Probable molybdopterin binding domain
CH43_2295	PF03453	MoeA N-terminal region (domain I and II)
CH43_2295	PF03454	MoeA C-terminal region (domain IV)
CH43_2296	PF04055	Radical SAM superfamily
CH43_2297	PF00005	ABC transporter
CH43_2298	PF13437	HlyD family secretion protein
CH43_230	PF05958	tRNA (Uracil-5-)-methyltransferase
CH43_2301	PF00756	Putative esterase
CH43_2302	PF00107	Zinc-binding dehydrogenase
CH43_2302	PF08240	Alcohol dehydrogenase GroES-like domain
CH43_2303	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2303	PF03466	LysR substrate binding domain
CH43_2304	PF06779	CH43_2304
CH43_2305	PF01227	GTP cyclohydrolase I
CH43_2306	PF04235	CH43_2306
CH43_2307	PF13407	Periplasmic binding protein domain
CH43_2308	PF00005	ABC transporter
CH43_2309	PF02653	CH43_2309
CH43_231	PF07226	CH43_231
CH43_2310	PF01695	IstB-like ATP binding protein
CH43_2312	PF00665	Integrase core domain
CH43_2312	PF02796	Helix-turn-helix domain of resolvase
CH43_2313	PF02653	CH43_2313
CH43_2314	PF02698	DUF218 domain
CH43_2315	PF00390	Malic enzyme, N-terminal domain
CH43_2315	PF03949	Malic enzyme, NAD binding domain
CH43_2316	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CH43_2316	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
CH43_2317	PF04172	CH43_2317
CH43_2318	PF03788	CH43_2318
CH43_2319	PF07690	Major Facilitator Superfamily
CH43_232	PF00440	Bacterial regulatory proteins, tetR family
CH43_2320	PF08309	CH43_2320
CH43_2321	PF13407	Periplasmic binding protein domain
CH43_2323	PF01797	Transposase IS200 like
CH43_2324	PF01588	Putative tRNA binding domain
CH43_2324	PF09334	tRNA synthetases class I (M)
CH43_2325	PF10609	ParA/MinD ATPase like
CH43_2326	PF00485	Phosphoribulokinase / Uridine kinase family
CH43_2327	PF00692	dUTPase
CH43_2328	PF05170	CH43_2328
CH43_2328	PF13502	CH43_2328
CH43_2329	PF00571	CBS domain
CH43_2329	PF03471	Transporter associated domain
CH43_2329	PF03741	CH43_2329
CH43_233	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_233	PF03466	LysR substrate binding domain
CH43_2330	PF06276	Ferric iron reductase FhuF-like transporter
CH43_2330	PF11575	CH43_2330
CH43_2331	PF00282	Pyridoxal-dependent decarboxylase conserved domain
CH43_2332	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
CH43_2333	PF13523	Acetyltransferase (GNAT) domain
CH43_2334	PF04183	IucA / IucC family
CH43_2334	PF06276	Ferric iron reductase FhuF-like transporter
CH43_2335	PF00005	ABC transporter
CH43_2336	PF01032	FecCD transport family
CH43_2337	PF01032	FecCD transport family
CH43_2338	PF01497	Periplasmic binding protein
CH43_2339	PF00593	TonB dependent receptor
CH43_2339	PF07715	TonB-dependent Receptor Plug Domain
CH43_234	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CH43_234	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_2340	PF04183	IucA / IucC family
CH43_2340	PF06276	Ferric iron reductase FhuF-like transporter
CH43_2341	PF00483	Nucleotidyl transferase
CH43_2342	PF00483	Nucleotidyl transferase
CH43_2343	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CH43_2343	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CH43_2344	PF01502	Phosphoribosyl-AMP cyclohydrolase
CH43_2344	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CH43_2345	PF00977	Histidine biosynthesis protein
CH43_2346	PF00977	Histidine biosynthesis protein
CH43_2347	PF00117	Glutamine amidotransferase class-I
CH43_2348	PF00475	Imidazoleglycerol-phosphate dehydratase
CH43_2348	PF13242	HAD-hyrolase-like
CH43_2349	PF00155	Aminotransferase class I and II
CH43_235	PF00462	Glutaredoxin
CH43_235	PF08534	Redoxin
CH43_2350	PF00815	Histidinol dehydrogenase
CH43_2351	PF01634	ATP phosphoribosyltransferase
CH43_2351	PF08029	HisG, C-terminal domain
CH43_2352	PF01370	NAD dependent epimerase/dehydratase family
CH43_2353	PF16695	CH43_2353
CH43_2354	PF02653	CH43_2354
CH43_2355	PF00005	ABC transporter
CH43_2356	PF00005	ABC transporter
CH43_2357	PF00465	Iron-containing alcohol dehydrogenase
CH43_2359	PF13520	Amino acid permease
CH43_236	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CH43_236	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_2360	PF00929	Exonuclease
CH43_2360	PF08411	Exonuclease C-terminal
CH43_2361	PF07993	Male sterility protein
CH43_2362	PF04363	CH43_2362
CH43_2363	PF02369	Bacterial Ig-like domain (group 1)
CH43_2363	PF09134	Invasin, domain 3
CH43_2363	PF11924	Protein of unknown function (DUF3442)
CH43_2364	PF00872	CH43_2364
CH43_2365	PF07690	Major Facilitator Superfamily
CH43_2366	PF04134	CH43_2366
CH43_2367	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_2368	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CH43_2369	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CH43_2369	PF13378	Enolase C-terminal domain-like
CH43_237	PF03544	Gram-negative bacterial TonB protein C-terminal
CH43_2371	PF01070	FMN-dependent dehydrogenase
CH43_2372	PF00764	Arginosuccinate synthase
CH43_2373	PF01554	MatE
CH43_2374	PF07690	Major Facilitator Superfamily
CH43_2375	PF01522	Polysaccharide deacetylase
CH43_2377	PF09831	CH43_2377
CH43_2379	PF00072	Response regulator receiver domain
CH43_2379	PF00196	Bacterial regulatory proteins, luxR family
CH43_238	PF13437	HlyD family secretion protein
CH43_238	PF13533	Biotin-lipoyl like
CH43_2380	PF06808	CH43_2380
CH43_2381	PF04290	CH43_2381
CH43_2382	PF03480	Bacterial extracellular solute-binding protein, family 7
CH43_2383	PF01648	4'-phosphopantetheinyl transferase superfamily
CH43_2386	PF02065	Melibiase
CH43_2386	PF16875	CH43_2386
CH43_2387	PF01306	LacY proton/sugar symporter
CH43_2388	PF00356	Bacterial regulatory proteins, lacI family
CH43_2388	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CH43_239	PF00005	ABC transporter
CH43_239	PF00664	ABC transporter transmembrane region
CH43_2390	PF06167	Glucose-regulated metallo-peptidase M90
CH43_2391	PF03795	YCII-related domain
CH43_2392	PF01163	RIO1 family
CH43_2393	PF01797	Transposase IS200 like
CH43_2394	PF00005	ABC transporter
CH43_2394	PF00664	ABC transporter transmembrane region
CH43_2396	PF12833	Helix-turn-helix domain
CH43_2398	PF10964	CH43_2398
CH43_2399	PF13996	CH43_2399
CH43_24	PF01406	tRNA synthetases class I (C) catalytic domain
CH43_24	PF09190	DALR domain
CH43_240	PF06438	Heme-binding protein A (HasA)
CH43_2400	PF13974	CH43_2400
CH43_2401	PF10765	Protein of unknown function (DUF2591)
CH43_2402	PF13269	CH43_2402
CH43_2403	PF00324	Amino acid permease
CH43_2404	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
CH43_2406	PF00313	'Cold-shock' DNA-binding domain
CH43_2407	PF02578	Multi-copper polyphenol oxidoreductase laccase
CH43_2408	PF13847	Methyltransferase domain
CH43_241	PF00593	TonB dependent receptor
CH43_241	PF07715	TonB-dependent Receptor Plug Domain
CH43_2410	PF00989	PAS fold
CH43_2410	PF00990	GGDEF domain
CH43_2410	PF13426	PAS domain
CH43_2411	PF00593	TonB dependent receptor
CH43_2411	PF07715	TonB-dependent Receptor Plug Domain
CH43_2412	PF02659	CH43_2412
CH43_2413	PF06173	CH43_2413
CH43_2414	PF03613	CH43_2414
CH43_2415	PF03609	CH43_2415
CH43_2416	PF03610	PTS system fructose IIA component
CH43_2416	PF03830	PTS system sorbose subfamily IIB component
CH43_2417	PF00571	CBS domain
CH43_2417	PF03741	CH43_2417
CH43_2418	PF01047	MarR family
CH43_2419	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CH43_2420	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CH43_2421	PF00171	Aldehyde dehydrogenase family
CH43_2422	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
CH43_2423	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
CH43_2425	PF03328	HpcH/HpaI aldolase/citrate lyase family
CH43_2426	PF07690	Major Facilitator Superfamily
CH43_2426	PF11700	CH43_2426
CH43_2427	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
CH43_2427	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
CH43_2428	PF01613	Flavin reductase like domain
CH43_2429	PF03313	CH43_2429
CH43_2429	PF03315	Serine dehydratase beta chain
CH43_243	PF00206	Lyase
CH43_243	PF14698	Argininosuccinate lyase C-terminal
CH43_2430	PF00293	NUDIX domain
CH43_2431	PF00425	chorismate binding enzyme
CH43_2431	PF04715	Anthranilate synthase component I, N terminal region
CH43_2432	PF03701	CH43_2432
CH43_2433	PF02222	ATP-grasp domain
CH43_2434	PF00270	DEAD/DEAH box helicase
CH43_2434	PF00271	Helicase conserved C-terminal domain
CH43_2434	PF03880	DbpA RNA binding domain
CH43_2435	PF07130	YebG protein
CH43_2436	PF04266	ASCH domain
CH43_2437	PF13995	YebF-like protein
CH43_2438	PF00326	Prolyl oligopeptidase family
CH43_2438	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
CH43_2439	PF00561	alpha/beta hydrolase fold
CH43_244	PF00696	Amino acid kinase family
CH43_2440	PF06440	DNA polymerase III, theta subunit
CH43_2441	PF00210	Ferritin-like domain
CH43_2442	PF04234	CopC domain
CH43_2443	PF05425	CH43_2443
CH43_2444	PF10709	CH43_2444
CH43_2445	PF07377	Protein of unknown function (DUF1493)
CH43_2447	PF01312	FlhB HrpN YscU SpaS Family
CH43_2448	PF00771	FHIPEP family
CH43_2449	PF06366	CH43_2449
CH43_245	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CH43_245	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CH43_2450	PF11924	Protein of unknown function (DUF3442)
CH43_2451	PF01797	Transposase IS200 like
CH43_2452	PF02369	Bacterial Ig-like domain (group 1)
CH43_2452	PF07979	Intimin C-type lectin domain
CH43_2452	PF09134	Invasin, domain 3
CH43_2452	PF11924	Protein of unknown function (DUF3442)
CH43_2453	PF05130	FlgN protein
CH43_2454	PF04316	Anti-sigma-28 factor, FlgM
CH43_2455	PF13144	SAF-like
CH43_2456	PF00460	Flagella basal body rod protein
CH43_2457	PF00460	Flagella basal body rod protein
CH43_2457	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_2458	PF03963	CH43_2458
CH43_2458	PF13860	FlgD Ig-like domain
CH43_2458	PF13861	FlgD Tudor-like domain
CH43_2459	PF00460	Flagella basal body rod protein
CH43_2459	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_2459	PF07559	Flagellar basal body protein FlaE
CH43_246	PF01546	Peptidase family M20/M25/M40
CH43_246	PF07687	Peptidase dimerisation domain
CH43_2460	PF00460	Flagella basal body rod protein
CH43_2461	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_2462	PF02107	CH43_2462
CH43_2463	PF02119	CH43_2463
CH43_2464	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CH43_2464	PF10135	CH43_2464
CH43_2465	PF00460	Flagella basal body rod protein
CH43_2465	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CH43_2466	PF00669	Bacterial flagellin N-terminal helical region
CH43_2467	PF04198	Putative sugar-binding domain
CH43_2468	PF00596	Class II Aldolase and Adducin N-terminal domain
CH43_2468	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_2469	PF02653	CH43_2469
CH43_247	PF00311	Phosphoenolpyruvate carboxylase
CH43_2470	PF13407	Periplasmic binding protein domain
CH43_2471	PF00005	ABC transporter
CH43_2472	PF02653	CH43_2472
CH43_2473	PF00294	pfkB family carbohydrate kinase
CH43_2474	PF15919	CH43_2474
CH43_2475	PF07927	YcfA-like protein
CH43_2476	PF01311	CH43_2476
CH43_2477	PF01313	CH43_2477
CH43_2478	PF00813	CH43_2478
CH43_2479	PF04347	CH43_2479
CH43_248	PF13518	Helix-turn-helix domain
CH43_2480	PF01052	Surface presentation of antigens (SPOA)
CH43_2480	PF16973	CH43_2480
CH43_2481	PF01052	Surface presentation of antigens (SPOA)
CH43_2481	PF02154	Flagellar motor switch protein FliM
CH43_2482	PF03748	CH43_2482
CH43_2483	PF02120	Flagellar hook-length control protein FliK
CH43_2484	PF02050	Flagellar FliJ protein
CH43_2485	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CH43_2486	PF02108	CH43_2486
CH43_2487	PF01706	FliG C-terminal domain
CH43_2487	PF14841	FliG middle domain
CH43_2487	PF14842	FliG N-terminal domain
CH43_2488	PF01514	Secretory protein of YscJ/FliF family
CH43_2488	PF08345	CH43_2488
CH43_2489	PF02049	CH43_2489
CH43_249	PF00665	Integrase core domain
CH43_249	PF13276	CH43_249
CH43_2491	PF02661	Fic/DOC family
CH43_2492	PF00730	HhH-GPD superfamily base excision DNA repair protein
CH43_2493	PF13487	HD domain
CH43_2494	PF12833	Helix-turn-helix domain
CH43_2495	PF05400	Flagellar protein FliT
CH43_2496	PF02561	Flagellar protein FliS
CH43_2497	PF02465	CH43_2497
CH43_2497	PF07195	CH43_2497
CH43_2497	PF07196	Flagellin hook IN motif
CH43_2498	PF00669	Bacterial flagellin N-terminal helical region
CH43_2498	PF00700	Bacterial flagellin C-terminal helical region
CH43_2499	PF04539	Sigma-70 region 3
CH43_2499	PF04542	Sigma-70 region 2
CH43_2499	PF04545	Sigma-70, region 4
CH43_25	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CH43_250	PF00312	Ribosomal protein S15
CH43_2500	PF02899	Phage integrase, N-terminal SAM-like domain
CH43_2501	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_2504	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2505	PF00005	ABC transporter
CH43_2508	PF00171	Aldehyde dehydrogenase family
CH43_2508	PF01619	Proline dehydrogenase
CH43_2508	PF14850	DNA-binding domain of Proline dehydrogenase
CH43_251	PF01509	TruB family pseudouridylate synthase (N terminal domain)
CH43_251	PF09157	Pseudouridine synthase II TruB, C-terminal
CH43_251	PF16198	CH43_251
CH43_2510	PF00474	Sodium:solute symporter family
CH43_2511	PF03239	CH43_2511
CH43_2512	PF09375	Imelysin
CH43_2512	PF13473	Cupredoxin-like domain
CH43_2513	PF04261	Dyp-type peroxidase family
CH43_2514	PF03358	NADPH-dependent FMN reductase
CH43_2515	PF01344	Kelch motif
CH43_2516	PF00324	Amino acid permease
CH43_2518	PF13505	Outer membrane protein beta-barrel domain
CH43_252	PF02033	Ribosome-binding factor A
CH43_2520	PF06942	CH43_2520
CH43_2521	PF10769	CH43_2521
CH43_2522	PF00072	Response regulator receiver domain
CH43_2522	PF00196	Bacterial regulatory proteins, luxR family
CH43_2523	PF01541	GIY-YIG catalytic domain
CH43_2523	PF02151	UvrB/uvrC motif
CH43_2523	PF08459	UvrC Helix-hairpin-helix N-terminal
CH43_2523	PF14520	Helix-hairpin-helix domain
CH43_2524	PF01066	CDP-alcohol phosphatidyltransferase
CH43_2529	PF03796	DnaB-like helicase C terminal domain
CH43_253	PF00009	Elongation factor Tu GTP binding domain
CH43_253	PF03144	Elongation factor Tu domain 2
CH43_253	PF04760	Translation initiation factor IF-2, N-terminal region
CH43_253	PF08364	CH43_253
CH43_253	PF11987	Translation-initiation factor 2
CH43_2533	PF05638	Protein of unknown function (DUF796)
CH43_2534	PF00665	Integrase core domain
CH43_2534	PF13565	CH43_2534
CH43_2535	PF01527	Transposase
CH43_2538	PF10908	CH43_2538
CH43_254	PF08529	NusA N-terminal domain
CH43_254	PF13184	NusA-like KH domain
CH43_254	PF14520	Helix-hairpin-helix domain
CH43_2540	PF04965	Gene 25-like lysozyme
CH43_2541	PF04717	Phage-related baseplate assembly protein
CH43_2542	PF04365	Protein of unknown function (DUF497)
CH43_2543	PF14384	CH43_2543
CH43_2544	PF13676	TIR domain
CH43_2545	PF00872	CH43_2545
CH43_2546	PF00872	CH43_2546
CH43_255	PF02576	Uncharacterised BCR, YhbC family COG0779
CH43_255	PF17384	CH43_255
CH43_2552	PF00392	Bacterial regulatory proteins, gntR family
CH43_2552	PF07702	UTRA domain
CH43_2553	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_2554	PF01547	Bacterial extracellular solute-binding protein
CH43_2555	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2556	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2557	PF00005	ABC transporter
CH43_2558	PF08402	TOBE domain
CH43_2560	PF00665	Integrase core domain
CH43_2560	PF02796	Helix-turn-helix domain of resolvase
CH43_2561	PF01695	IstB-like ATP binding protein
CH43_2562	PF05321	Haemolysin expression modulating protein
CH43_2563	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CH43_2564	PF11198	CH43_2564
CH43_2566	PF05930	Prophage CP4-57 regulatory protein (AlpA)
CH43_2569	PF00593	TonB dependent receptor
CH43_2569	PF07715	TonB-dependent Receptor Plug Domain
CH43_2570	PF00501	AMP-binding enzyme
CH43_2570	PF13193	AMP-binding enzyme C-terminal domain
CH43_2571	PF00975	Thioesterase domain
CH43_2572	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_2573	PF00109	Beta-ketoacyl synthase, N-terminal domain
CH43_2573	PF00550	Phosphopantetheine attachment site
CH43_2573	PF00668	Condensation domain
CH43_2573	PF00698	Acyl transferase domain
CH43_2573	PF00975	Thioesterase domain
CH43_2573	PF02801	Beta-ketoacyl synthase, C-terminal domain
CH43_2573	PF08242	Methyltransferase domain
CH43_2573	PF08659	KR domain
CH43_2573	PF16197	CH43_2573
CH43_2574	PF00501	AMP-binding enzyme
CH43_2574	PF00550	Phosphopantetheine attachment site
CH43_2574	PF00668	Condensation domain
CH43_2574	PF08242	Methyltransferase domain
CH43_2575	PF12833	Helix-turn-helix domain
CH43_2576	PF00005	ABC transporter
CH43_2576	PF00664	ABC transporter transmembrane region
CH43_2577	PF00005	ABC transporter
CH43_2577	PF00664	ABC transporter transmembrane region
CH43_2578	PF07690	Major Facilitator Superfamily
CH43_2579	PF00425	chorismate binding enzyme
CH43_258	PF03840	Preprotein translocase SecG subunit
CH43_2580	PF00589	Phage integrase family
CH43_2580	PF13356	Domain of unknown function (DUF4102)
CH43_2582	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_2583	PF00872	CH43_2583
CH43_2584	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_2585	PF00419	Fimbrial protein
CH43_2586	PF00577	Outer membrane usher protein
CH43_2586	PF13953	PapC C-terminal domain
CH43_2586	PF13954	PapC N-terminal domain
CH43_2587	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_2587	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_2588	PF00419	Fimbrial protein
CH43_2589	PF00072	Response regulator receiver domain
CH43_2589	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_2589	PF00512	His Kinase A (phospho-acceptor) domain
CH43_2589	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_259	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CH43_259	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CH43_259	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CH43_259	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CH43_2590	PF00072	Response regulator receiver domain
CH43_2590	PF00196	Bacterial regulatory proteins, luxR family
CH43_2592	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
CH43_2592	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
CH43_2593	PF01575	MaoC like domain
CH43_2594	PF03328	HpcH/HpaI aldolase/citrate lyase family
CH43_2595	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2595	PF03466	LysR substrate binding domain
CH43_2598	PF07690	Major Facilitator Superfamily
CH43_2599	PF04909	Amidohydrolase
CH43_26	PF00149	Calcineurin-like phosphoesterase
CH43_260	PF00809	Pterin binding enzyme
CH43_2600	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2600	PF03466	LysR substrate binding domain
CH43_2601	PF02508	CH43_2601
CH43_2602	PF00155	Aminotransferase class I and II
CH43_2603	PF00324	Amino acid permease
CH43_2604	PF00455	CH43_2604
CH43_2604	PF08220	DeoR-like helix-turn-helix domain
CH43_2605	PF04960	Glutaminase
CH43_2606	PF07690	Major Facilitator Superfamily
CH43_2609	PF10634	Fe2+ transport protein
CH43_261	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_261	PF01434	Peptidase family M41
CH43_261	PF06480	FtsH Extracellular
CH43_2610	PF04945	YHS domain
CH43_2610	PF10080	CH43_2610
CH43_2611	PF02687	CH43_2611
CH43_2612	PF02687	CH43_2612
CH43_2612	PF12704	MacB-like periplasmic core domain
CH43_2613	PF00005	ABC transporter
CH43_2614	PF00578	AhpC/TSA family
CH43_2615	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
CH43_2616	PF03848	Tellurite resistance protein TehB
CH43_2616	PF09313	Domain of unknown function (DUF1971)
CH43_2617	PF00557	Metallopeptidase family M24
CH43_2617	PF01321	Creatinase/Prolidase N-terminal domain
CH43_2619	PF01522	Polysaccharide deacetylase
CH43_2619	PF14883	Hypothetical glycosyl hydrolase family 13
CH43_262	PF01728	FtsJ-like methyltransferase
CH43_2620	PF00535	Glycosyl transferase family 2
CH43_2621	PF13994	CH43_2621
CH43_2622	PF13302	Acetyltransferase (GNAT) domain
CH43_2624	PF02562	PhoH-like protein
CH43_2625	PF01699	Sodium/calcium exchanger protein
CH43_2627	PF00672	HAMP domain
CH43_2627	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_2627	PF07730	Histidine kinase
CH43_2627	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
CH43_2628	PF00155	Aminotransferase class I and II
CH43_263	PF01985	CRS1 / YhbY (CRM) domain
CH43_2631	PF00202	Aminotransferase class-III
CH43_2632	PF04958	Arginine N-succinyltransferase beta subunit
CH43_2633	PF00171	Aldehyde dehydrogenase family
CH43_2634	PF04996	Succinylarginine dihydrolase
CH43_2635	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
CH43_2636	PF00267	Gram-negative porin
CH43_2637	PF00872	CH43_2637
CH43_2638	PF00872	CH43_2638
CH43_2639	PF05013	N-formylglutamate amidohydrolase
CH43_264	PF01272	Transcription elongation factor, GreA/GreB, C-term
CH43_264	PF03449	Transcription elongation factor, N-terminal
CH43_2640	PF01695	IstB-like ATP binding protein
CH43_2641	PF01695	IstB-like ATP binding protein
CH43_2642	PF00665	Integrase core domain
CH43_2642	PF02796	Helix-turn-helix domain of resolvase
CH43_2643	PF01979	Amidohydrolase family
CH43_2644	PF00392	Bacterial regulatory proteins, gntR family
CH43_2644	PF07702	UTRA domain
CH43_2645	PF01979	Amidohydrolase family
CH43_2646	PF05962	HutD
CH43_2647	PF00425	chorismate binding enzyme
CH43_2648	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CH43_2649	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
CH43_265	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
CH43_2650	PF01370	NAD dependent epimerase/dehydratase family
CH43_2651	PF00753	Metallo-beta-lactamase superfamily
CH43_2653	PF01370	NAD dependent epimerase/dehydratase family
CH43_2654	PF13506	Glycosyl transferase family 21
CH43_2656	PF04101	Glycosyltransferase family 28 C-terminal domain
CH43_2659	PF00872	CH43_2659
CH43_266	PF00072	Response regulator receiver domain
CH43_266	PF00486	Transcriptional regulatory protein, C terminal
CH43_2660	PF07661	CH43_2660
CH43_2660	PF08238	Sel1 repeat
CH43_2662	PF13226	CH43_2662
CH43_2663	PF02502	Ribose/Galactose Isomerase
CH43_2663	PF12408	Ribose-5-phosphate isomerase
CH43_2664	PF08242	Methyltransferase domain
CH43_2665	PF00106	short chain dehydrogenase
CH43_2669	PF13646	HEAT repeats
CH43_267	PF00512	His Kinase A (phospho-acceptor) domain
CH43_267	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_2670	PF12697	Alpha/beta hydrolase family
CH43_2671	PF07883	Cupin domain
CH43_2672	PF02627	Carboxymuconolactone decarboxylase family
CH43_2673	PF00512	His Kinase A (phospho-acceptor) domain
CH43_2673	PF00672	HAMP domain
CH43_2673	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_2674	PF00486	Transcriptional regulatory protein, C terminal
CH43_2675	PF01695	IstB-like ATP binding protein
CH43_2676	PF00665	Integrase core domain
CH43_2676	PF02796	Helix-turn-helix domain of resolvase
CH43_2677	PF00072	Response regulator receiver domain
CH43_2678	PF01738	Dienelactone hydrolase family
CH43_2679	PF12682	Flavodoxin
CH43_268	PF01018	GTP1/OBG
CH43_268	PF01926	50S ribosome-binding GTPase
CH43_2680	PF14358	CH43_2680
CH43_2681	PF13316	CH43_2681
CH43_2683	PF07859	alpha/beta hydrolase fold
CH43_2684	PF00581	Rhodanese-like domain
CH43_2685	PF00665	Integrase core domain
CH43_2687	PF01926	50S ribosome-binding GTPase
CH43_2687	PF06071	Protein of unknown function (DUF933)
CH43_2688	PF01195	Peptidyl-tRNA hydrolase
CH43_2689	PF10762	CH43_2689
CH43_269	PF00892	EamA-like transporter family
CH43_2690	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CH43_2690	PF14572	Phosphoribosyl synthetase-associated domain
CH43_2691	PF00288	GHMP kinases N terminal domain
CH43_2691	PF08544	GHMP kinases C terminal
CH43_2692	PF03550	Outer membrane lipoprotein LolB
CH43_2693	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
CH43_2693	PF01488	Shikimate / quinate 5-dehydrogenase
CH43_2693	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
CH43_2694	PF00472	RF-1 domain
CH43_2694	PF03462	PCRF domain
CH43_2695	PF13847	Methyltransferase domain
CH43_2696	PF04247	CH43_2696
CH43_2697	PF13369	CH43_2697
CH43_2697	PF13371	Tetratricopeptide repeat
CH43_2698	PF00793	DAHP synthetase I family
CH43_2699	PF00916	CH43_2699
CH43_2699	PF01740	STAS domain
CH43_27	PF00731	AIR carboxylase
CH43_270	PF01016	Ribosomal L27 protein
CH43_2701	PF03009	Glycerophosphoryl diester phosphodiesterase family
CH43_2702	PF13416	Bacterial extracellular solute-binding protein
CH43_2703	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2704	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2705	PF00005	ABC transporter
CH43_2706	PF01797	Transposase IS200 like
CH43_2707	PF00005	ABC transporter
CH43_2708	PF03009	Glycerophosphoryl diester phosphodiesterase family
CH43_2709	PF00480	ROK family
CH43_2709	PF13412	Winged helix-turn-helix DNA-binding
CH43_271	PF00829	Ribosomal prokaryotic L21 protein
CH43_2711	PF02811	PHP domain
CH43_2712	PF02613	Nitrate reductase delta subunit
CH43_2713	PF07273	Protein of unknown function (DUF1439)
CH43_2714	PF07690	Major Facilitator Superfamily
CH43_2715	PF13302	Acetyltransferase (GNAT) domain
CH43_2716	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_2717	PF03023	CH43_2717
CH43_2718	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
CH43_2718	PF08479	POTRA domain, ShlB-type
CH43_2718	PF17287	CH43_2718
CH43_2719	PF05860	haemagglutination activity domain
CH43_2719	PF13332	CH43_2719
CH43_272	PF00348	Polyprenyl synthetase
CH43_2720	PF00750	tRNA synthetases class I (R)
CH43_2720	PF03485	Arginyl tRNA synthetase N terminal domain
CH43_2720	PF05746	DALR anticodon binding domain
CH43_2721	PF06185	YecM protein
CH43_2722	PF03932	CutC family
CH43_2723	PF08003	Protein of unknown function (DUF1698)
CH43_2724	PF13649	Methyltransferase domain
CH43_2725	PF01124	MAPEG family
CH43_2726	PF01904	Protein of unknown function DUF72
CH43_2727	PF00152	tRNA synthetases class II (D, K and N)
CH43_2727	PF01336	OB-fold nucleic acid binding domain
CH43_2727	PF02938	GAD domain
CH43_2728	PF00293	NUDIX domain
CH43_2729	PF01709	Transcriptional regulator
CH43_273	PF02316	Mu DNA-binding domain
CH43_2730	PF02075	Crossover junction endodeoxyribonuclease RuvC
CH43_2731	PF01330	RuvA N terminal domain
CH43_2731	PF07499	RuvA, C-terminal domain
CH43_2731	PF14520	Helix-hairpin-helix domain
CH43_2732	PF05491	Holliday junction DNA helicase ruvB C-terminus
CH43_2732	PF05496	Holliday junction DNA helicase ruvB N-terminus
CH43_2733	PF00950	CH43_2733
CH43_2734	PF00005	ABC transporter
CH43_2735	PF01297	Periplasmic solute binding protein family
CH43_2736	PF01551	Peptidase family M23
CH43_2736	PF04225	Opacity-associated protein A LysM-like domain
CH43_2736	PF08525	CH43_2736
CH43_2737	PF03279	CH43_2737
CH43_2738	PF00224	Pyruvate kinase, barrel domain
CH43_2738	PF02887	Pyruvate kinase, alpha/beta domain
CH43_2739	PF01380	SIS domain
CH43_2739	PF01418	Helix-turn-helix domain, rpiR family
CH43_274	PF13693	Winged helix-turn-helix DNA-binding
CH43_2740	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
CH43_2740	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
CH43_2742	PF01081	KDPG and KHG aldolase
CH43_2743	PF00893	Small Multidrug Resistance protein
CH43_2744	PF00893	Small Multidrug Resistance protein
CH43_2745	PF01042	Endoribonuclease L-PSP
CH43_2746	PF06733	DEAD_2
CH43_2746	PF13307	Helicase C-terminal domain
CH43_2747	PF00814	Glycoprotease family
CH43_2749	PF00501	AMP-binding enzyme
CH43_2749	PF13193	AMP-binding enzyme C-terminal domain
CH43_275	PF00056	lactate/malate dehydrogenase, NAD binding domain
CH43_275	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CH43_2750	PF00570	HRDC domain
CH43_2750	PF01612	3'-5' exonuclease
CH43_2751	PF03776	Septum formation topological specificity factor MinE
CH43_2752	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
CH43_2753	PF03775	Septum formation inhibitor MinC, C-terminal domain
CH43_2753	PF05209	Septum formation inhibitor MinC, N-terminal domain
CH43_2754	PF05166	YcgL domain
CH43_2755	PF13406	Transglycosylase SLT domain
CH43_2756	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CH43_2757	PF03692	CH43_2757
CH43_2758	PF00589	Phage integrase family
CH43_2758	PF12167	CH43_2758
CH43_2759	PF00665	Integrase core domain
CH43_2759	PF02796	Helix-turn-helix domain of resolvase
CH43_276	PF01316	Arginine repressor, DNA binding domain
CH43_276	PF02863	Arginine repressor, C-terminal domain
CH43_2760	PF01695	IstB-like ATP binding protein
CH43_2761	PF06806	Putative excisionase (DUF1233)
CH43_2762	PF02086	D12 class N6 adenine-specific DNA methyltransferase
CH43_2763	PF05772	NinB protein
CH43_2764	PF05766	CH43_2764
CH43_2765	PF06530	CH43_2765
CH43_2766	PF02498	CH43_2766
CH43_2769	PF16080	CH43_2769
CH43_277	PF07338	Protein of unknown function (DUF1471)
CH43_2770	PF00959	Phage lysozyme
CH43_2771	PF03245	CH43_2771
CH43_2773	PF03374	CH43_2773
CH43_2775	PF10045	CH43_2775
CH43_2778	PF13264	CH43_2778
CH43_278	PF01225	Mur ligase family, catalytic domain
CH43_278	PF02875	Mur ligase family, glutamate ligase domain
CH43_278	PF08245	Mur ligase middle domain
CH43_2781	PF02368	Bacterial Ig-like domain (group 2)
CH43_2786	PF13554	Bacteriophage related domain of unknown function
CH43_2787	PF02368	Bacterial Ig-like domain (group 2)
CH43_2787	PF08813	CH43_2787
CH43_2788	PF08748	CH43_2788
CH43_2789	PF08809	CH43_2789
CH43_279	PF00316	Fructose-1-6-bisphosphatase
CH43_2790	PF06791	CH43_2790
CH43_2790	PF09718	CH43_2790
CH43_2791	PF05939	CH43_2791
CH43_2792	PF01797	Transposase IS200 like
CH43_2793	PF01797	Transposase IS200 like
CH43_2794	PF05100	CH43_2794
CH43_2795	PF00877	NlpC/P60 family
CH43_2795	PF14464	Prokaryotic homologs of the JAB domain
CH43_2798	PF03869	Arc-like DNA binding domain
CH43_28	PF02222	ATP-grasp domain
CH43_280	PF00719	Inorganic pyrophosphatase
CH43_2800	PF02498	CH43_2800
CH43_2801	PF13248	CH43_2801
CH43_2803	PF06805	CH43_2803
CH43_2806	PF09327	CH43_2806
CH43_2806	PF13550	CH43_2806
CH43_2809	PF02413	CH43_2809
CH43_281	PF06094	AIG2-like family
CH43_2810	PF07690	Major Facilitator Superfamily
CH43_2811	PF00266	Aminotransferase class-V
CH43_2814	PF02600	Disulfide bond formation protein DsbB
CH43_2815	PF06450	CH43_2815
CH43_2816	PF00392	Bacterial regulatory proteins, gntR family
CH43_2816	PF07840	FadR C-terminal domain
CH43_2817	PF04293	CH43_2817
CH43_2818	PF01266	FAD dependent oxidoreductase
CH43_2819	PF07690	Major Facilitator Superfamily
CH43_282	PF04357	CH43_282
CH43_2820	PF02678	Pirin
CH43_2820	PF05726	Pirin C-terminal cupin domain
CH43_2821	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2821	PF03466	LysR substrate binding domain
CH43_2822	PF00892	EamA-like transporter family
CH43_2823	PF04285	CH43_2823
CH43_2824	PF06798	CH43_2824
CH43_2824	PF08298	PrkA AAA domain
CH43_2825	PF06629	CH43_2825
CH43_2826	PF01263	Aldose 1-epimerase
CH43_2827	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CH43_2827	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CH43_2828	PF01641	SelR domain
CH43_2829	PF07023	CH43_2829
CH43_283	PF01103	Surface antigen
CH43_283	PF07244	Surface antigen variable number repeat
CH43_283	PF17243	CH43_283
CH43_2830	PF00857	Isochorismatase family
CH43_2831	PF00710	Asparaginase
CH43_2832	PF01343	Peptidase family S49
CH43_2833	PF00881	Nitroreductase family
CH43_2834	PF00586	AIR synthase related protein, N-terminal domain
CH43_2834	PF02769	AIR synthase related protein, C-terminal domain
CH43_2835	PF01131	DNA topoisomerase
CH43_2835	PF01751	Toprim domain
CH43_2836	PF07383	CH43_2836
CH43_2837	PF00293	NUDIX domain
CH43_2838	PF03372	Endonuclease/Exonuclease/phosphatase family
CH43_2839	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_284	PF01625	Peptide methionine sulfoxide reductase
CH43_2840	PF00872	CH43_2840
CH43_2841	PF00872	CH43_2841
CH43_2844	PF00551	Formyl transferase
CH43_2844	PF01842	ACT domain
CH43_2845	PF02810	SEC-C motif
CH43_2846	PF00072	Response regulator receiver domain
CH43_2847	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CH43_2847	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CH43_2847	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CH43_2848	PF00872	CH43_2848
CH43_2849	PF00816	H-NS histone family
CH43_285	PF00571	CBS domain
CH43_285	PF01595	CH43_285
CH43_285	PF03471	Transporter associated domain
CH43_2850	PF00265	Thymidine kinase
CH43_2851	PF00171	Aldehyde dehydrogenase family
CH43_2851	PF00465	Iron-containing alcohol dehydrogenase
CH43_2852	PF01914	CH43_2852
CH43_2853	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_2854	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2855	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2855	PF12911	CH43_2855
CH43_2856	PF00005	ABC transporter
CH43_2856	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CH43_2857	PF00005	ABC transporter
CH43_2857	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CH43_2859	PF04269	Protein of unknown function, DUF440
CH43_286	PF06526	Protein of unknown function (DUF1107)
CH43_2860	PF13091	PLD-like domain
CH43_2860	PF13396	CH43_2860
CH43_2861	PF13505	Outer membrane protein beta-barrel domain
CH43_2863	PF13453	CH43_2863
CH43_2864	PF03795	YCII-related domain
CH43_2866	PF03544	Gram-negative bacterial TonB protein C-terminal
CH43_2866	PF16031	CH43_2866
CH43_2867	PF00872	CH43_2867
CH43_2868	PF03061	Thioesterase superfamily
CH43_2869	PF04279	CH43_2869
CH43_287	PF09695	CH43_287
CH43_2870	PF00916	CH43_2870
CH43_2871	PF01740	STAS domain
CH43_2872	PF06790	CH43_2872
CH43_2873	PF03922	OmpW family
CH43_2874	PF04972	BON domain
CH43_2875	PF00290	Tryptophan synthase alpha chain
CH43_2876	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_2877	PF00218	Indole-3-glycerol phosphate synthase
CH43_2877	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CH43_2878	PF00591	Glycosyl transferase family, a/b domain
CH43_2878	PF02885	Glycosyl transferase family, helical bundle domain
CH43_2879	PF00117	Glutamine amidotransferase class-I
CH43_288	PF00459	Inositol monophosphatase family
CH43_2880	PF00425	chorismate binding enzyme
CH43_2880	PF04715	Anthranilate synthase component I, N terminal region
CH43_2881	PF02811	PHP domain
CH43_2882	PF01300	Telomere recombination
CH43_2883	PF00849	RNA pseudouridylate synthase
CH43_2883	PF01479	S4 domain
CH43_2884	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
CH43_2884	PF12557	Cob(I)alamin adenosyltransferase N terminal
CH43_2885	PF00106	short chain dehydrogenase
CH43_2886	PF01343	Peptidase family S49
CH43_2886	PF08496	CH43_2886
CH43_2887	PF10692	Protein of unknown function (DUF2498)
CH43_2889	PF01131	DNA topoisomerase
CH43_2889	PF01396	CH43_2889
CH43_2889	PF01751	Toprim domain
CH43_2889	PF08272	Topoisomerase I zinc-ribbon-like
CH43_289	PF00149	Calcineurin-like phosphoesterase
CH43_289	PF02872	5'-nucleotidase, C-terminal domain
CH43_2890	PF01797	Transposase IS200 like
CH43_2891	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2891	PF03466	LysR substrate binding domain
CH43_2893	PF00330	Aconitase family (aconitate hydratase)
CH43_2893	PF00694	Aconitase C-terminal domain
CH43_2894	PF00925	GTP cyclohydrolase II
CH43_2895	PF01569	PAP2 superfamily
CH43_2896	PF06305	CH43_2896
CH43_2897	PF13176	Tetratricopeptide repeat
CH43_2897	PF13432	Tetratricopeptide repeat
CH43_2899	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CH43_29	PF02687	CH43_29
CH43_290	PF01814	Hemerythrin HHE cation binding domain
CH43_290	PF04405	CH43_290
CH43_2900	PF01253	Translation initiation factor SUI1
CH43_2902	PF00596	Class II Aldolase and Adducin N-terminal domain
CH43_2903	PF09932	CH43_2903
CH43_2904	PF00923	Transaldolase
CH43_2905	PF04328	CH43_2905
CH43_2906	PF02554	CH43_2906
CH43_2906	PF13722	CH43_2906
CH43_2907	PF00575	S1 RNA binding domain
CH43_2907	PF00773	RNB domain
CH43_2907	PF08206	Ribonuclease B OB domain
CH43_2908	PF07690	Major Facilitator Superfamily
CH43_2909	PF01370	NAD dependent epimerase/dehydratase family
CH43_291	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CH43_291	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
CH43_2910	PF00633	Helix-hairpin-helix motif
CH43_2910	PF00730	HhH-GPD superfamily base excision DNA repair protein
CH43_2910	PF10576	Iron-sulfur binding domain of endonuclease III
CH43_2911	PF02508	CH43_2911
CH43_2912	PF04205	FMN-binding domain
CH43_2913	PF03116	CH43_2913
CH43_2914	PF06445	GyrI-like small molecule binding domain
CH43_2914	PF12833	Helix-turn-helix domain
CH43_2915	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
CH43_2915	PF10531	SLBB domain
CH43_2915	PF13237	4Fe-4S dicluster domain
CH43_2915	PF13375	RnfC Barrel sandwich hybrid domain
CH43_2916	PF04060	Putative Fe-S cluster
CH43_2916	PF14697	4Fe-4S dicluster domain
CH43_2917	PF02508	CH43_2917
CH43_2918	PF10754	CH43_2918
CH43_2919	PF00005	ABC transporter
CH43_2919	PF00664	ABC transporter transmembrane region
CH43_292	PF04225	Opacity-associated protein A LysM-like domain
CH43_292	PF08525	CH43_292
CH43_2921	PF13533	Biotin-lipoyl like
CH43_2922	PF00529	HlyD family secretion protein
CH43_2923	PF00005	ABC transporter
CH43_2923	PF00664	ABC transporter transmembrane region
CH43_2923	PF03412	Peptidase C39 family
CH43_2925	PF02610	L-arabinose isomerase
CH43_2925	PF11762	L-arabinose isomerase C-terminal domain
CH43_2926	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_2926	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_2927	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CH43_2928	PF00005	ABC transporter
CH43_293	PF12582	CH43_293
CH43_2931	PF02311	AraC-like ligand binding domain
CH43_2931	PF12833	Helix-turn-helix domain
CH43_2932	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_2932	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CH43_2933	PF13593	SBF-like CPA transporter family (DUF4137)
CH43_2935	PF06097	CH43_2935
CH43_2936	PF01238	Phosphomannose isomerase type I
CH43_2937	PF00206	Lyase
CH43_2937	PF10415	Fumarase C C-terminus
CH43_2938	PF05472	DNA replication terminus site-binding protein (Ter protein)
CH43_2939	PF07690	Major Facilitator Superfamily
CH43_294	PF01797	Transposase IS200 like
CH43_2940	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_2940	PF03466	LysR substrate binding domain
CH43_2941	PF00480	ROK family
CH43_2943	PF13500	AAA domain
CH43_2944	PF00654	Voltage gated chloride channel
CH43_2945	PF06649	CH43_2945
CH43_2946	PF00356	Bacterial regulatory proteins, lacI family
CH43_2946	PF13377	Periplasmic binding protein-like domain
CH43_2948	PF13407	Periplasmic binding protein domain
CH43_2949	PF13379	NMT1-like family
CH43_295	PF01281	Ribosomal protein L9, N-terminal domain
CH43_295	PF03948	Ribosomal protein L9, C-terminal domain
CH43_2950	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_2951	PF00005	ABC transporter
CH43_2952	PF01048	Phosphorylase superfamily
CH43_2952	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
CH43_2954	PF07520	CH43_2954
CH43_2957	PF07313	Protein of unknown function (DUF1460)
CH43_2958	PF00205	Thiamine pyrophosphate enzyme, central domain
CH43_2958	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CH43_2958	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CH43_2959	PF13710	ACT domain
CH43_296	PF01084	Ribosomal protein S18
CH43_2960	PF13419	Haloacid dehalogenase-like hydrolase
CH43_2961	PF13208	CH43_2961
CH43_2961	PF15615	CH43_2961
CH43_2962	PF00245	Alkaline phosphatase
CH43_2963	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CH43_2963	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CH43_2964	PF00027	Cyclic nucleotide-binding domain
CH43_2964	PF13545	Crp-like helix-turn-helix domain
CH43_2965	PF00582	Universal stress protein family
CH43_2966	PF02233	NAD(P) transhydrogenase beta subunit
CH43_2967	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CH43_2967	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
CH43_2967	PF12769	Domain of unknown function (DUF3814)
CH43_2968	PF07338	Protein of unknown function (DUF1471)
CH43_2969	PF13520	Amino acid permease
CH43_297	PF01250	Ribosomal protein S6
CH43_2971	PF00072	Response regulator receiver domain
CH43_2971	PF00486	Transcriptional regulatory protein, C terminal
CH43_2972	PF00512	His Kinase A (phospho-acceptor) domain
CH43_2972	PF00672	HAMP domain
CH43_2972	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_2973	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
CH43_2974	PF01797	Transposase IS200 like
CH43_2975	PF03497	Anthrax toxin LF subunit
CH43_2977	PF04264	YceI-like domain
CH43_2978	PF01292	Prokaryotic cytochrome b561
CH43_2980	PF00089	Trypsin
CH43_2981	PF01381	Helix-turn-helix
CH43_2982	PF05973	CH43_2982
CH43_2983	PF00270	DEAD/DEAH box helicase
CH43_2983	PF00271	Helicase conserved C-terminal domain
CH43_2983	PF04408	Helicase associated domain (HA2)
CH43_2983	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
CH43_2983	PF11898	CH43_2983
CH43_2984	PF02525	Flavodoxin-like fold
CH43_2985	PF04198	Putative sugar-binding domain
CH43_2986	PF01232	Mannitol dehydrogenase Rossmann domain
CH43_2986	PF08125	Mannitol dehydrogenase C-terminal domain
CH43_2987	PF07027	CH43_2987
CH43_2988	PF13617	CH43_2988
CH43_2989	PF11739	CH43_2989
CH43_299	PF00326	Prolyl oligopeptidase family
CH43_2990	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CH43_2990	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CH43_2991	PF03724	META domain
CH43_2992	PF03891	CH43_2992
CH43_2993	PF02308	CH43_2993
CH43_2994	PF00893	Small Multidrug Resistance protein
CH43_2995	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
CH43_2995	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
CH43_2995	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CH43_2995	PF10371	Domain of unknown function
CH43_2995	PF12838	4Fe-4S dicluster domain
CH43_2995	PF17147	CH43_2995
CH43_2996	PF01171	PP-loop family
CH43_2998	PF07859	alpha/beta hydrolase fold
CH43_2999	PF13411	MerR HTH family regulatory protein
CH43_3	PF00248	Aldo/keto reductase family
CH43_30	PF00005	ABC transporter
CH43_300	PF01695	IstB-like ATP binding protein
CH43_3000	PF01544	CorA-like Mg2+ transporter protein
CH43_3001	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_3002	PF00246	Zinc carboxypeptidase
CH43_3003	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
CH43_3003	PF13378	Enolase C-terminal domain-like
CH43_3004	PF08534	Redoxin
CH43_3005	PF00665	Integrase core domain
CH43_3005	PF02796	Helix-turn-helix domain of resolvase
CH43_3006	PF01695	IstB-like ATP binding protein
CH43_3007	PF01797	Transposase IS200 like
CH43_3008	PF00158	Sigma-54 interaction domain
CH43_3008	PF00989	PAS fold
CH43_3009	PF09722	CH43_3009
CH43_301	PF00665	Integrase core domain
CH43_301	PF02796	Helix-turn-helix domain of resolvase
CH43_3010	PF08808	CH43_3010
CH43_3011	PF05128	CH43_3011
CH43_3012	PF04317	CH43_3012
CH43_3013	PF09584	CH43_3013
CH43_3014	PF04024	CH43_3014
CH43_3015	PF06667	CH43_3015
CH43_3016	PF04012	CH43_3016
CH43_3017	PF00158	Sigma-54 interaction domain
CH43_3017	PF02954	Bacterial regulatory protein, Fis family
CH43_3018	PF01797	Transposase IS200 like
CH43_3019	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_302	PF13673	Acetyltransferase (GNAT) domain
CH43_3020	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3021	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3021	PF12911	CH43_3021
CH43_3022	PF00005	ABC transporter
CH43_3022	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CH43_3023	PF00005	ABC transporter
CH43_3026	PF00854	POT family
CH43_3027	PF06930	CH43_3027
CH43_3028	PF11656	CH43_3028
CH43_3029	PF00043	Glutathione S-transferase, C-terminal domain
CH43_3029	PF02798	Glutathione S-transferase, N-terminal domain
CH43_303	PF00485	Phosphoribulokinase / Uridine kinase family
CH43_3030	PF08543	Phosphomethylpyrimidine kinase
CH43_3031	PF00579	tRNA synthetases class I (W and Y)
CH43_3031	PF01479	S4 domain
CH43_3032	PF01243	Pyridoxamine 5'-phosphate oxidase
CH43_3032	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
CH43_3033	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
CH43_3034	PF03702	Uncharacterised protein family (UPF0075)
CH43_3035	PF05433	CH43_3035
CH43_3036	PF01047	MarR family
CH43_3037	PF00248	Aldo/keto reductase family
CH43_3038	PF06945	CH43_3038
CH43_3039	PF00884	Sulfatase
CH43_3039	PF08019	CH43_3039
CH43_304	PF02237	Biotin protein ligase C terminal domain
CH43_304	PF03099	Biotin/lipoate A/B protein ligase family
CH43_304	PF08279	HTH domain
CH43_3040	PF00440	Bacterial regulatory proteins, tetR family
CH43_3040	PF16925	CH43_3040
CH43_3041	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CH43_3043	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CH43_3044	PF00929	Exonuclease
CH43_3045	PF00462	Glutaredoxin
CH43_3047	PF00877	NlpC/P60 family
CH43_3048	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CH43_3048	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CH43_305	PF01565	FAD binding domain
CH43_305	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CH43_3050	PF00356	Bacterial regulatory proteins, lacI family
CH43_3050	PF13377	Periplasmic binding protein-like domain
CH43_3051	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3051	PF03466	LysR substrate binding domain
CH43_3052	PF07690	Major Facilitator Superfamily
CH43_3053	PF02353	Mycolic acid cyclopropane synthetase
CH43_3054	PF00677	Lumazine binding domain
CH43_3055	PF01554	MatE
CH43_3058	PF00224	Pyruvate kinase, barrel domain
CH43_3058	PF02887	Pyruvate kinase, alpha/beta domain
CH43_3059	PF04728	Lipoprotein leucine-zipper
CH43_3060	PF01797	Transposase IS200 like
CH43_3061	PF00665	Integrase core domain
CH43_3061	PF02796	Helix-turn-helix domain of resolvase
CH43_3063	PF01695	IstB-like ATP binding protein
CH43_3064	PF03734	L,D-transpeptidase catalytic domain
CH43_3065	PF02657	Fe-S metabolism associated domain
CH43_3066	PF00266	Aminotransferase class-V
CH43_3067	PF01458	Uncharacterized protein family (UPF0051)
CH43_3068	PF00005	ABC transporter
CH43_3069	PF01458	Uncharacterized protein family (UPF0051)
CH43_3070	PF01521	Iron-sulphur cluster biosynthesis
CH43_3071	PF03061	Thioesterase superfamily
CH43_3072	PF01565	FAD binding domain
CH43_3072	PF02913	FAD linked oxidases, C-terminal domain
CH43_3072	PF13183	4Fe-4S dicluster domain
CH43_3073	PF01594	CH43_3073
CH43_3074	PF00391	PEP-utilising enzyme, mobile domain
CH43_3074	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CH43_3074	PF02896	PEP-utilising enzyme, TIM barrel domain
CH43_3075	PF03618	CH43_3075
CH43_3076	PF00793	DAHP synthetase I family
CH43_3077	PF02696	CH43_3077
CH43_3078	PF03099	Biotin/lipoate A/B protein ligase family
CH43_3078	PF10437	Bacterial lipoate protein ligase C-terminus
CH43_3079	PF00877	NlpC/P60 family
CH43_3081	PF00892	EamA-like transporter family
CH43_3082	PF02366	CH43_3082
CH43_3083	PF01522	Polysaccharide deacetylase
CH43_3084	PF00551	Formyl transferase
CH43_3084	PF01370	NAD dependent epimerase/dehydratase family
CH43_3084	PF02911	Formyl transferase, C-terminal domain
CH43_3085	PF00535	Glycosyl transferase family 2
CH43_3086	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CH43_3087	PF00005	ABC transporter
CH43_3088	PF00255	Glutathione peroxidase
CH43_3089	PF01032	FecCD transport family
CH43_3090	PF10697	CH43_3090
CH43_3091	PF00216	Bacterial DNA-binding protein
CH43_3092	PF01588	Putative tRNA binding domain
CH43_3092	PF03147	Ferredoxin-fold anticodon binding domain
CH43_3092	PF03483	B3/4 domain
CH43_3092	PF03484	tRNA synthetase B5 domain
CH43_3093	PF01409	tRNA synthetases class II core domain (F)
CH43_3093	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CH43_3094	PF00453	Ribosomal protein L20
CH43_3095	PF01632	Ribosomal protein L35
CH43_3096	PF00707	Translation initiation factor IF-3, C-terminal domain
CH43_3097	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CH43_3097	PF02824	TGS domain
CH43_3097	PF03129	Anticodon binding domain
CH43_3097	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CH43_3098	PF13619	CH43_3098
CH43_31	PF13472	GDSL-like Lipase/Acylhydrolase family
CH43_3100	PF01914	CH43_3100
CH43_3101	PF01464	Transglycosylase SLT domain
CH43_3102	PF01297	Periplasmic solute binding protein family
CH43_3103	PF00005	ABC transporter
CH43_3104	PF00950	CH43_3104
CH43_3105	PF00950	CH43_3105
CH43_3106	PF03881	Fructosamine kinase
CH43_3107	PF14002	CH43_3107
CH43_3108	PF13419	Haloacid dehalogenase-like hydrolase
CH43_3109	PF00872	CH43_3109
CH43_311	PF12724	Flavodoxin domain
CH43_3110	PF07883	Cupin domain
CH43_3111	PF04962	KduI/IolB family
CH43_3112	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_3113	PF06917	Periplasmic pectate lyase
CH43_3114	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3115	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3116	PF00005	ABC transporter
CH43_3117	PF01547	Bacterial extracellular solute-binding protein
CH43_3118	PF06178	Oligogalacturonate-specific porin protein (KdgM)
CH43_3119	PF04307	CH43_3119
CH43_312	PF02386	Cation transport protein
CH43_3120	PF00375	Sodium:dicarboxylate symporter family
CH43_3121	PF01471	Putative peptidoglycan binding domain
CH43_3121	PF01510	N-acetylmuramoyl-L-alanine amidase
CH43_3122	PF01614	Bacterial transcriptional regulator
CH43_3122	PF09339	IclR helix-turn-helix domain
CH43_3123	PF14583	Oligogalacturonate lyase
CH43_3124	PF07690	Major Facilitator Superfamily
CH43_3125	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_3125	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_3126	PF00419	Fimbrial protein
CH43_3127	PF00577	Outer membrane usher protein
CH43_3127	PF13953	PapC C-terminal domain
CH43_3127	PF13954	PapC N-terminal domain
CH43_3128	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_3128	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_3129	PF16970	CH43_3129
CH43_313	PF01205	Uncharacterized protein family UPF0029
CH43_313	PF09186	Domain of unknown function (DUF1949)
CH43_3130	PF01435	Peptidase family M48
CH43_3132	PF00595	PDZ domain (Also known as DHR or GLGF)
CH43_3132	PF03572	Peptidase family S41
CH43_3132	PF11818	CH43_3132
CH43_3133	PF04352	ProQ/FINO family
CH43_3133	PF17516	CH43_3133
CH43_3134	PF13185	GAF domain
CH43_3135	PF04403	CH43_3135
CH43_3136	PF02470	CH43_3136
CH43_3137	PF05229	CH43_3137
CH43_3138	PF05229	CH43_3138
CH43_3139	PF05229	CH43_3139
CH43_314	PF00557	Metallopeptidase family M24
CH43_3140	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_3141	PF00577	Outer membrane usher protein
CH43_3141	PF13953	PapC C-terminal domain
CH43_3142	PF05229	CH43_3142
CH43_3143	PF07351	CH43_3143
CH43_3144	PF04266	ASCH domain
CH43_3145	PF00665	Integrase core domain
CH43_3145	PF02796	Helix-turn-helix domain of resolvase
CH43_3146	PF01695	IstB-like ATP binding protein
CH43_3147	PF01695	IstB-like ATP binding protein
CH43_315	PF00378	Enoyl-CoA hydratase/isomerase family
CH43_315	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CH43_315	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CH43_3150	PF01734	Patatin-like phospholipase
CH43_3153	PF00842	Alanine racemase, C-terminal domain
CH43_3153	PF01168	Alanine racemase, N-terminal domain
CH43_3156	PF03895	YadA-like C-terminal region
CH43_3156	PF05662	Coiled stalk of trimeric autotransporter adhesin
CH43_3157	PF05658	Head domain of trimeric autotransporter adhesin
CH43_3157	PF05662	Coiled stalk of trimeric autotransporter adhesin
CH43_3158	PF01510	N-acetylmuramoyl-L-alanine amidase
CH43_3159	PF04344	Chemotaxis phosphatase, CheZ
CH43_316	PF00108	Thiolase, N-terminal domain
CH43_316	PF02803	Thiolase, C-terminal domain
CH43_3160	PF00072	Response regulator receiver domain
CH43_3161	PF00072	Response regulator receiver domain
CH43_3161	PF01339	CheB methylesterase
CH43_3162	PF01739	CheR methyltransferase, SAM binding domain
CH43_3162	PF03705	CheR methyltransferase, all-alpha domain
CH43_3163	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_3163	PF00672	HAMP domain
CH43_3163	PF02203	Tar ligand binding domain homologue
CH43_3164	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_3164	PF00672	HAMP domain
CH43_3164	PF02203	Tar ligand binding domain homologue
CH43_3166	PF10101	CH43_3166
CH43_3167	PF03797	Autotransporter beta-domain
CH43_3168	PF08348	CH43_3168
CH43_3168	PF13309	CH43_3168
CH43_3169	PF01261	Xylose isomerase-like TIM barrel
CH43_317	PF00175	Oxidoreductase NAD-binding domain
CH43_317	PF00970	Oxidoreductase FAD-binding domain
CH43_3170	PF01042	Endoribonuclease L-PSP
CH43_3171	PF07690	Major Facilitator Superfamily
CH43_3172	PF01584	CheW-like domain
CH43_3173	PF01584	CheW-like domain
CH43_3173	PF01627	Hpt domain
CH43_3173	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3173	PF02895	Signal transducing histidine kinase, homodimeric domain
CH43_3173	PF09078	CheY binding
CH43_3174	PF00691	OmpA family
CH43_3174	PF13677	CH43_3174
CH43_3175	PF01618	CH43_3175
CH43_3176	PF05280	Flagellar transcriptional activator (FlhC)
CH43_3177	PF05247	Flagellar transcriptional activator (FlhD)
CH43_3178	PF00122	E1-E2 ATPase
CH43_3178	PF00689	Cation transporting ATPase, C-terminus
CH43_3178	PF00690	Cation transporter/ATPase, N-terminus
CH43_3178	PF00702	haloacid dehalogenase-like hydrolase
CH43_3179	PF02308	CH43_3179
CH43_318	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
CH43_3180	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_3180	PF02203	Tar ligand binding domain homologue
CH43_3181	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_3182	PF10781	CH43_3182
CH43_3183	PF00313	'Cold-shock' DNA-binding domain
CH43_3184	PF00703	Glycosyl hydrolases family 2
CH43_3184	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
CH43_3184	PF02837	Glycosyl hydrolases family 2, sugar binding domain
CH43_3184	PF02929	Beta galactosidase small chain
CH43_3184	PF16353	CH43_3184
CH43_3185	PF00107	Zinc-binding dehydrogenase
CH43_3185	PF08240	Alcohol dehydrogenase GroES-like domain
CH43_3186	PF10777	CH43_3186
CH43_3187	PF01037	AsnC family
CH43_3187	PF13412	Winged helix-turn-helix DNA-binding
CH43_3188	PF11004	CH43_3188
CH43_3189	PF14001	CH43_3189
CH43_319	PF02357	Transcription termination factor nusG
CH43_3190	PF00328	Histidine phosphatase superfamily (branch 2)
CH43_3192	PF01638	HxlR-like helix-turn-helix
CH43_3193	PF05368	NmrA-like family
CH43_3194	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_3194	PF08447	PAS fold
CH43_3196	PF00356	Bacterial regulatory proteins, lacI family
CH43_3196	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CH43_3197	PF00180	Isocitrate/isopropylmalate dehydrogenase
CH43_3198	PF00849	RNA pseudouridylate synthase
CH43_3199	PF00293	NUDIX domain
CH43_32	PF00106	short chain dehydrogenase
CH43_320	PF00490	Delta-aminolevulinic acid dehydratase
CH43_3200	PF03054	tRNA methyl transferase
CH43_3201	PF04356	Protein of unknown function (DUF489)
CH43_3202	PF00206	Lyase
CH43_3202	PF08328	Adenylosuccinate lyase C-terminal
CH43_3203	PF13505	Outer membrane protein beta-barrel domain
CH43_3204	PF00072	Response regulator receiver domain
CH43_3204	PF00486	Transcriptional regulatory protein, C terminal
CH43_3205	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3205	PF08918	PhoQ Sensor
CH43_3206	PF08007	Cupin superfamily protein
CH43_3207	PF01546	Peptidase family M20/M25/M40
CH43_3207	PF07687	Peptidase dimerisation domain
CH43_3208	PF02146	Sir2 family
CH43_3209	PF00480	ROK family
CH43_321	PF01026	TatD related DNase
CH43_3210	PF02687	CH43_3210
CH43_3210	PF12704	MacB-like periplasmic core domain
CH43_3211	PF00005	ABC transporter
CH43_3212	PF02687	CH43_3212
CH43_3212	PF12704	MacB-like periplasmic core domain
CH43_3213	PF00270	DEAD/DEAH box helicase
CH43_3213	PF00271	Helicase conserved C-terminal domain
CH43_3213	PF02559	CarD-like/TRCF domain
CH43_3213	PF03461	TRCF domain
CH43_3214	PF05433	CH43_3214
CH43_3215	PF00872	CH43_3215
CH43_3218	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_3219	PF05728	Uncharacterised protein family (UPF0227)
CH43_322	PF00902	Sec-independent protein translocase protein (TatC)
CH43_3220	PF00933	Glycosyl hydrolase family 3 N terminal domain
CH43_3221	PF01636	Phosphotransferase enzyme family
CH43_3222	PF13036	Protein of unknown function (DUF3897)
CH43_3223	PF07233	Protein of unknown function (DUF1425)
CH43_3224	PF01230	HIT domain
CH43_3225	PF08501	Shikimate dehydrogenase substrate binding domain
CH43_3226	PF01797	Transposase IS200 like
CH43_3227	PF00367	phosphotransferase system, EIIB
CH43_3227	PF02378	Phosphotransferase system, EIIC
CH43_3228	PF01026	TatD related DNase
CH43_3229	PF09115	DNA polymerase III, delta subunit, C terminal
CH43_3229	PF13177	DNA polymerase III, delta subunit
CH43_3230	PF02223	Thymidylate kinase
CH43_3231	PF02618	YceG-like family
CH43_3232	PF01063	Aminotransferase class IV
CH43_3233	PF01797	Transposase IS200 like
CH43_3234	PF00109	Beta-ketoacyl synthase, N-terminal domain
CH43_3234	PF02801	Beta-ketoacyl synthase, C-terminal domain
CH43_3235	PF00550	Phosphopantetheine attachment site
CH43_3236	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_3237	PF00698	Acyl transferase domain
CH43_3238	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
CH43_3238	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CH43_3239	PF02504	Fatty acid synthesis protein
CH43_324	PF02416	mttA/Hcf106 family
CH43_3240	PF01783	Ribosomal L32p protein family
CH43_3241	PF02620	CH43_3241
CH43_3242	PF02545	Maf-like protein
CH43_3243	PF00849	RNA pseudouridylate synthase
CH43_3243	PF01479	S4 domain
CH43_3244	PF00575	S1 RNA binding domain
CH43_3244	PF10150	Ribonuclease E/G family
CH43_3244	PF12111	Polyribonucleotide phosphorylase C terminal
CH43_3245	PF03992	Antibiotic biosynthesis monooxygenase
CH43_3246	PF01979	Amidohydrolase family
CH43_3247	PF06183	DinI-like family
CH43_3248	PF00872	CH43_3248
CH43_3249	PF13991	CH43_3249
CH43_325	PF03109	CH43_325
CH43_3250	PF01266	FAD dependent oxidoreductase
CH43_3251	PF00196	Bacterial regulatory proteins, luxR family
CH43_3252	PF01594	CH43_3252
CH43_3253	PF00581	Rhodanese-like domain
CH43_3253	PF12368	CH43_3253
CH43_3255	PF00892	EamA-like transporter family
CH43_3256	PF00196	Bacterial regulatory proteins, luxR family
CH43_3256	PF03472	Autoinducer binding domain
CH43_3257	PF00765	Autoinducer synthetase
CH43_3258	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3258	PF03466	LysR substrate binding domain
CH43_326	PF02036	SCP-2 sterol transfer family
CH43_3260	PF00083	Sugar (and other) transporter
CH43_3261	PF08714	Formaldehyde-activating enzyme (Fae)
CH43_3262	PF00248	Aldo/keto reductase family
CH43_3263	PF09618	CRISPR-associated protein (Cas_Csy4)
CH43_3264	PF09615	CH43_3264
CH43_3265	PF09614	CH43_3265
CH43_3266	PF09611	CH43_3266
CH43_3268	PF01867	CRISPR associated protein Cas1
CH43_3269	PF00924	Mechanosensitive ion channel
CH43_327	PF01209	ubiE/COQ5 methyltransferase family
CH43_3272	PF08950	Protein of unknown function (DUF1861)
CH43_3273	PF04041	Domain of unknown function (DUF377)
CH43_3274	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3275	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3276	PF13416	Bacterial extracellular solute-binding protein
CH43_3277	PF00356	Bacterial regulatory proteins, lacI family
CH43_3277	PF13377	Periplasmic binding protein-like domain
CH43_3278	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CH43_3278	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CH43_3278	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CH43_3278	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CH43_3279	PF00005	ABC transporter
CH43_3279	PF08402	TOBE domain
CH43_328	PF02646	CH43_328
CH43_3280	PF00872	CH43_3280
CH43_3283	PF14106	CH43_3283
CH43_3286	PF04829	CH43_3286
CH43_3288	PF10004	CH43_3288
CH43_3289	PF04829	CH43_3289
CH43_3289	PF05594	CH43_3289
CH43_3289	PF05860	haemagglutination activity domain
CH43_3289	PF13018	CH43_3289
CH43_3289	PF13332	CH43_3289
CH43_329	PF09335	CH43_329
CH43_3290	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
CH43_3290	PF08479	POTRA domain, ShlB-type
CH43_3290	PF17287	CH43_3290
CH43_3291	PF00111	2Fe-2S iron-sulfur cluster binding domain
CH43_3291	PF00175	Oxidoreductase NAD-binding domain
CH43_3291	PF00970	Oxidoreductase FAD-binding domain
CH43_3292	PF00355	Rieske [2Fe-2S] domain
CH43_3292	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
CH43_3293	PF02028	BCCT family transporter
CH43_3294	PF00180	Isocitrate/isopropylmalate dehydrogenase
CH43_3295	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3295	PF03466	LysR substrate binding domain
CH43_3296	PF00356	Bacterial regulatory proteins, lacI family
CH43_3296	PF13407	Periplasmic binding protein domain
CH43_3297	PF02653	CH43_3297
CH43_33	PF00085	Thioredoxin
CH43_33	PF14559	Tetratricopeptide repeat
CH43_33	PF14561	Tetratricopeptide repeat
CH43_330	PF02554	CH43_330
CH43_330	PF13722	CH43_330
CH43_3300	PF13407	Periplasmic binding protein domain
CH43_3301	PF00107	Zinc-binding dehydrogenase
CH43_3301	PF08240	Alcohol dehydrogenase GroES-like domain
CH43_3302	PF16809	CH43_3302
CH43_3303	PF16809	CH43_3303
CH43_3304	PF01545	Cation efflux family
CH43_3305	PF13505	Outer membrane protein beta-barrel domain
CH43_3306	PF00892	EamA-like transporter family
CH43_3307	PF00583	Acetyltransferase (GNAT) family
CH43_3308	PF13649	Methyltransferase domain
CH43_3309	PF00210	Ferritin-like domain
CH43_331	PF13350	Tyrosine phosphatase family
CH43_3310	PF02698	DUF218 domain
CH43_3311	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_3312	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3313	PF00005	ABC transporter
CH43_3314	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_3314	PF08448	PAS fold
CH43_3314	PF13426	PAS domain
CH43_3315	PF05971	Protein of unknown function (DUF890)
CH43_3316	PF07338	Protein of unknown function (DUF1471)
CH43_3317	PF00591	Glycosyl transferase family, a/b domain
CH43_3317	PF02885	Glycosyl transferase family, helical bundle domain
CH43_3318	PF00501	AMP-binding enzyme
CH43_3319	PF13378	Enolase C-terminal domain-like
CH43_332	PF01048	Phosphorylase superfamily
CH43_3320	PF00378	Enoyl-CoA hydratase/isomerase family
CH43_3321	PF12697	Alpha/beta hydrolase family
CH43_3322	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CH43_3322	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CH43_3322	PF16582	CH43_3322
CH43_3323	PF00425	chorismate binding enzyme
CH43_3325	PF05957	CH43_3325
CH43_3327	PF00920	Dehydratase family
CH43_3328	PF03928	Domain of unknown function (DUF336)
CH43_3329	PF07690	Major Facilitator Superfamily
CH43_333	PF01738	Dienelactone hydrolase family
CH43_3330	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CH43_3330	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CH43_3331	PF00356	Bacterial regulatory proteins, lacI family
CH43_3331	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
CH43_3332	PF02638	CH43_3332
CH43_3333	PF00106	short chain dehydrogenase
CH43_3334	PF01202	Shikimate kinase
CH43_3335	PF04074	Domain of unknown function (DUF386)
CH43_3337	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CH43_3338	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CH43_3339	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CH43_3339	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CH43_334	PF01717	Cobalamin-independent synthase, Catalytic domain
CH43_334	PF08267	Cobalamin-independent synthase, N-terminal domain
CH43_3340	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CH43_3341	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
CH43_3342	PF12838	4Fe-4S dicluster domain
CH43_3343	PF00146	NADH dehydrogenase
CH43_3344	PF00384	Molybdopterin oxidoreductase
CH43_3344	PF01568	Molydopterin dinucleotide binding domain
CH43_3344	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CH43_3344	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CH43_3344	PF13510	2Fe-2S iron-sulfur cluster binding domain
CH43_3345	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
CH43_3345	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CH43_3346	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
CH43_3347	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
CH43_3347	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
CH43_3348	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
CH43_3349	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
CH43_335	PF00892	EamA-like transporter family
CH43_3350	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3350	PF03466	LysR substrate binding domain
CH43_3351	PF00155	Aminotransferase class I and II
CH43_3352	PF13023	HD domain
CH43_3353	PF02080	TrkA-C domain
CH43_3353	PF03600	Citrate transporter
CH43_3354	PF13419	Haloacid dehalogenase-like hydrolase
CH43_3355	PF03887	YfbU domain
CH43_3356	PF04217	CH43_3356
CH43_3357	PF00871	Acetokinase family
CH43_3358	PF01515	Phosphate acetyl/butaryl transferase
CH43_3358	PF07085	DRTGG domain
CH43_3358	PF13500	AAA domain
CH43_3359	PF00356	Bacterial regulatory proteins, lacI family
CH43_3359	PF13377	Periplasmic binding protein-like domain
CH43_336	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_336	PF03466	LysR substrate binding domain
CH43_3360	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CH43_3361	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CH43_3362	PF03611	CH43_3362
CH43_3363	PF00293	NUDIX domain
CH43_3366	PF00563	EAL domain
CH43_3367	PF01370	NAD dependent epimerase/dehydratase family
CH43_3367	PF08338	Domain of unknown function (DUF1731)
CH43_3368	PF00005	ABC transporter
CH43_3369	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_337	PF03547	CH43_337
CH43_3370	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3371	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_3372	PF02441	Flavoprotein
CH43_3373	PF00156	Phosphoribosyl transferase domain
CH43_3373	PF13522	Glutamine amidotransferase domain
CH43_3374	PF02674	CH43_3374
CH43_3375	PF05036	Sporulation related domain
CH43_3376	PF02875	Mur ligase family, glutamate ligase domain
CH43_3376	PF08245	Mur ligase middle domain
CH43_3377	PF01039	Carboxyl transferase domain
CH43_3378	PF09335	CH43_3378
CH43_3379	PF01416	tRNA pseudouridine synthase
CH43_338	PF03009	Glycerophosphoryl diester phosphodiesterase family
CH43_3380	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CH43_3380	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CH43_3381	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CH43_3381	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CH43_3381	PF11890	Domain of unknown function (DUF3410)
CH43_3382	PF02311	AraC-like ligand binding domain
CH43_3382	PF12833	Helix-turn-helix domain
CH43_3383	PF00892	EamA-like transporter family
CH43_3385	PF00419	Fimbrial protein
CH43_3386	PF01177	Asp/Glu/Hydantoin racemase
CH43_3387	PF00109	Beta-ketoacyl synthase, N-terminal domain
CH43_3387	PF02801	Beta-ketoacyl synthase, C-terminal domain
CH43_3388	PF01266	FAD dependent oxidoreductase
CH43_3388	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
CH43_3389	PF08891	CH43_3389
CH43_339	PF00005	ABC transporter
CH43_339	PF08402	TOBE domain
CH43_3390	PF04315	CH43_3390
CH43_3391	PF01925	CH43_3391
CH43_3392	PF03411	Penicillin-insensitive murein endopeptidase
CH43_3393	PF01264	Chorismate synthase
CH43_3394	PF05175	Methyltransferase small domain
CH43_3395	PF01713	Smr domain
CH43_3396	PF00300	Histidine phosphatase superfamily (branch 1)
CH43_3397	PF00378	Enoyl-CoA hydratase/isomerase family
CH43_3397	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
CH43_3397	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CH43_3398	PF00108	Thiolase, N-terminal domain
CH43_3398	PF02803	Thiolase, C-terminal domain
CH43_3399	PF04175	Protein of unknown function (DUF406)
CH43_34	PF01145	SPFH domain / Band 7 family
CH43_340	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3400	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
CH43_3401	PF04333	CH43_3401
CH43_3402	PF14559	Tetratricopeptide repeat
CH43_3403	PF03918	Cytochrome C biogenesis protein
CH43_3404	PF08534	Redoxin
CH43_3405	PF01578	CH43_3405
CH43_3405	PF16327	CH43_3405
CH43_3406	PF03100	CcmE
CH43_3407	PF04995	CH43_3407
CH43_3408	PF01578	CH43_3408
CH43_3409	PF03379	CH43_3409
CH43_341	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3410	PF00005	ABC transporter
CH43_3413	PF04011	LemA family
CH43_3414	PF09972	CH43_3414
CH43_3415	PF03831	PhnA protein
CH43_3415	PF08274	PhnA Zinc-Ribbon
CH43_3417	PF04965	Gene 25-like lysozyme
CH43_3418	PF07024	ImpE protein
CH43_342	PF13416	Bacterial extracellular solute-binding protein
CH43_3420	PF05488	PAAR motif
CH43_3421	PF05954	Phage late control gene D protein (GPD)
CH43_3424	PF00691	OmpA family
CH43_3424	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
CH43_3425	PF01695	IstB-like ATP binding protein
CH43_3426	PF00665	Integrase core domain
CH43_3426	PF02796	Helix-turn-helix domain of resolvase
CH43_3427	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
CH43_3428	PF05936	CH43_3428
CH43_3429	PF12790	Type VI secretion lipoprotein
CH43_343	PF04449	CS1 type fimbrial major subunit
CH43_3430	PF05638	Protein of unknown function (DUF796)
CH43_3431	PF05943	CH43_3431
CH43_3432	PF05591	CH43_3432
CH43_3433	PF00419	Fimbrial protein
CH43_3434	PF00577	Outer membrane usher protein
CH43_3434	PF13953	PapC C-terminal domain
CH43_3435	PF00872	CH43_3435
CH43_3436	PF00577	Outer membrane usher protein
CH43_3436	PF13954	PapC N-terminal domain
CH43_3437	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_3437	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_3438	PF16970	CH43_3438
CH43_3439	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_3439	PF02861	Clp amino terminal domain
CH43_3439	PF07724	AAA domain (Cdc48 subfamily)
CH43_3439	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_344	PF16967	CH43_344
CH43_3440	PF05947	CH43_3440
CH43_3441	PF06996	CH43_3441
CH43_3442	PF06812	CH43_3442
CH43_3443	PF00419	Fimbrial protein
CH43_3444	PF11397	CH43_3444
CH43_3446	PF00691	OmpA family
CH43_3447	PF08786	Domain of unknown function (DUF1795)
CH43_3448	PF00196	Bacterial regulatory proteins, luxR family
CH43_3449	PF13406	Transglycosylase SLT domain
CH43_3450	PF13343	Bacterial extracellular solute-binding protein
CH43_3451	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3452	PF00005	ABC transporter
CH43_3453	PF09900	CH43_3453
CH43_3454	PF05638	Protein of unknown function (DUF796)
CH43_3455	PF13988	CH43_3455
CH43_3456	PF00384	Molybdopterin oxidoreductase
CH43_3456	PF01568	Molydopterin dinucleotide binding domain
CH43_3456	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CH43_3457	PF12800	4Fe-4S binding domain
CH43_3457	PF13247	4Fe-4S dicluster domain
CH43_3458	PF04976	CH43_3458
CH43_3459	PF02613	Nitrate reductase delta subunit
CH43_3460	PF00037	4Fe-4S binding domain
CH43_3460	PF12838	4Fe-4S dicluster domain
CH43_3461	PF05643	Putative bacterial lipoprotein (DUF799)
CH43_3462	PF16068	CH43_3462
CH43_3463	PF03783	Curli production assembly/transport component CsgG
CH43_3464	PF15970	CH43_3464
CH43_3465	PF01292	Prokaryotic cytochrome b561
CH43_3466	PF00155	Aminotransferase class I and II
CH43_3467	PF07350	Protein of unknown function (DUF1479)
CH43_3468	PF02685	Glucokinase
CH43_3469	PF05232	CH43_3469
CH43_3470	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3470	PF03466	LysR substrate binding domain
CH43_3471	PF00248	Aldo/keto reductase family
CH43_3472	PF10697	CH43_3472
CH43_3473	PF01566	CH43_3473
CH43_3474	PF01773	Na+ dependent nucleoside transporter N-terminus
CH43_3474	PF07662	Na+ dependent nucleoside transporter C-terminus
CH43_3474	PF07670	Nucleoside recognition
CH43_3479	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CH43_3481	PF01797	Transposase IS200 like
CH43_3482	PF06042	Bacterial protein of unknown function (DUF925)
CH43_3483	PF14282	CH43_3483
CH43_3484	PF12843	CH43_3484
CH43_3485	PF00533	BRCA1 C Terminus (BRCT) domain
CH43_3485	PF01653	NAD-dependent DNA ligase adenylation domain
CH43_3485	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
CH43_3485	PF03120	NAD-dependent DNA ligase OB-fold domain
CH43_3485	PF12826	Helix-hairpin-helix motif
CH43_3485	PF14520	Helix-hairpin-helix domain
CH43_3486	PF04354	ZipA, C-terminal FtsZ-binding domain
CH43_3487	PF07264	Etoposide-induced protein 2
CH43_3488	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_3489	PF00381	PTS HPr component phosphorylation site
CH43_3490	PF00391	PEP-utilising enzyme, mobile domain
CH43_3490	PF02896	PEP-utilising enzyme, TIM barrel domain
CH43_3490	PF05524	PEP-utilising enzyme, N-terminal
CH43_3491	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CH43_3492	PF01797	Transposase IS200 like
CH43_3493	PF01797	Transposase IS200 like
CH43_3495	PF00512	His Kinase A (phospho-acceptor) domain
CH43_3495	PF00672	HAMP domain
CH43_3495	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3496	PF00072	Response regulator receiver domain
CH43_3496	PF00486	Transcriptional regulatory protein, C terminal
CH43_3497	PF16576	CH43_3497
CH43_3498	PF00005	ABC transporter
CH43_3498	PF02687	CH43_3498
CH43_3498	PF12704	MacB-like periplasmic core domain
CH43_3499	PF00581	Rhodanese-like domain
CH43_3499	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CH43_3499	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_35	PF01957	NfeD-like C-terminal, partner-binding
CH43_350	PF00005	ABC transporter
CH43_3501	PF11755	CH43_3501
CH43_3502	PF00557	Metallopeptidase family M24
CH43_3502	PF01321	Creatinase/Prolidase N-terminal domain
CH43_3503	PF01321	Creatinase/Prolidase N-terminal domain
CH43_3504	PF00155	Aminotransferase class I and II
CH43_3505	PF00092	von Willebrand factor type A domain
CH43_3506	PF00512	His Kinase A (phospho-acceptor) domain
CH43_3506	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3507	PF00072	Response regulator receiver domain
CH43_3507	PF00486	Transcriptional regulatory protein, C terminal
CH43_3509	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_351	PF00005	ABC transporter
CH43_351	PF12399	Branched-chain amino acid ATP-binding cassette transporter
CH43_3510	PF00005	ABC transporter
CH43_3511	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3512	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3513	PF13531	Bacterial extracellular solute-binding protein
CH43_3514	PF07690	Major Facilitator Superfamily
CH43_3515	PF01380	SIS domain
CH43_3515	PF01418	Helix-turn-helix domain, rpiR family
CH43_3516	PF04074	Domain of unknown function (DUF386)
CH43_3517	PF00480	ROK family
CH43_3518	PF12468	Type III secretion system leucine rich repeat protein
CH43_3518	PF13855	Leucine rich repeat
CH43_3519	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
CH43_352	PF02653	CH43_352
CH43_352	PF11862	CH43_352
CH43_3520	PF00701	Dihydrodipicolinate synthetase family
CH43_3521	PF04261	Dyp-type peroxidase family
CH43_3524	PF04076	Bacterial OB fold (BOF) protein
CH43_3525	PF03212	Pertactin
CH43_3525	PF03797	Autotransporter beta-domain
CH43_3528	PF00583	Acetyltransferase (GNAT) family
CH43_3529	PF01218	Coproporphyrinogen III oxidase
CH43_353	PF02653	CH43_353
CH43_3530	PF02639	CH43_3530
CH43_3531	PF00390	Malic enzyme, N-terminal domain
CH43_3531	PF01515	Phosphate acetyl/butaryl transferase
CH43_3531	PF03949	Malic enzyme, NAD binding domain
CH43_3532	PF00293	NUDIX domain
CH43_3533	PF03264	NapC/NirT cytochrome c family, N-terminal region
CH43_3534	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
CH43_3535	PF00384	Molybdopterin oxidoreductase
CH43_3535	PF01568	Molydopterin dinucleotide binding domain
CH43_3535	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CH43_3535	PF10518	TAT (twin-arginine translocation) pathway signal sequence
CH43_3536	PF03927	NapD protein
CH43_3537	PF12838	4Fe-4S dicluster domain
CH43_3537	PF13187	4Fe-4S dicluster domain
CH43_3538	PF00072	Response regulator receiver domain
CH43_3538	PF00196	Bacterial regulatory proteins, luxR family
CH43_3539	PF09904	Winged helix-turn helix
CH43_354	PF13458	Periplasmic binding protein
CH43_3540	PF00873	AcrB/AcrD/AcrF family
CH43_3542	PF04307	CH43_3542
CH43_3543	PF04055	Radical SAM superfamily
CH43_3543	PF13353	4Fe-4S single cluster domain
CH43_3544	PF00884	Sulfatase
CH43_3545	PF00005	ABC transporter
CH43_3546	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3547	PF13416	Bacterial extracellular solute-binding protein
CH43_3548	PF12688	Tetratrico peptide repeat
CH43_3549	PF03960	ArsC family
CH43_355	PF12568	Acetyltransferase (GNAT) domain
CH43_3550	PF01546	Peptidase family M20/M25/M40
CH43_3550	PF07687	Peptidase dimerisation domain
CH43_3551	PF02557	D-alanyl-D-alanine carboxypeptidase
CH43_3552	PF13980	CH43_3552
CH43_3553	PF05127	Helicase
CH43_3553	PF08351	Domain of unknown function (DUF1726)
CH43_3553	PF13718	GNAT acetyltransferase 2
CH43_3553	PF17176	CH43_3553
CH43_3554	PF04284	CH43_3554
CH43_3555	PF04228	CH43_3555
CH43_3556	PF01259	SAICAR synthetase
CH43_3557	PF01797	Transposase IS200 like
CH43_3558	PF06804	NlpB/DapX lipoprotein
CH43_3559	PF00701	Dihydrodipicolinate synthetase family
CH43_356	PF01797	Transposase IS200 like
CH43_3560	PF13740	ACT domain
CH43_3561	PF00578	AhpC/TSA family
CH43_3564	PF01594	CH43_3564
CH43_3565	PF01435	Peptidase family M48
CH43_3565	PF07720	Tetratricopeptide repeat
CH43_3565	PF14559	Tetratricopeptide repeat
CH43_3566	PF03960	ArsC family
CH43_3567	PF00308	Bacterial dnaA  protein
CH43_3568	PF01797	Transposase IS200 like
CH43_3569	PF14681	Uracil phosphoribosyltransferase
CH43_357	PF00140	Sigma-70 factor, region 1
CH43_357	PF04542	Sigma-70 region 2
CH43_357	PF04545	Sigma-70, region 4
CH43_3570	PF00586	AIR synthase related protein, N-terminal domain
CH43_3570	PF02769	AIR synthase related protein, C-terminal domain
CH43_3571	PF00551	Formyl transferase
CH43_3572	PF13302	Acetyltransferase (GNAT) domain
CH43_3574	PF03692	CH43_3574
CH43_3575	PF00005	ABC transporter
CH43_3576	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3577	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3578	PF02503	Polyphosphate kinase middle domain
CH43_3578	PF13089	Polyphosphate kinase N-terminal domain
CH43_3578	PF13090	Polyphosphate kinase C-terminal domain
CH43_3579	PF02541	Ppx/GppA phosphatase family
CH43_358	PF02687	CH43_358
CH43_3580	PF00571	CBS domain
CH43_3580	PF01769	Divalent cation transporter
CH43_3580	PF03448	MgtE intracellular N domain
CH43_3581	PF00012	Hsp70 protein
CH43_3582	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3583	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3584	PF13416	Bacterial extracellular solute-binding protein
CH43_3585	PF00202	Aminotransferase class-III
CH43_3586	PF00155	Aminotransferase class I and II
CH43_3586	PF00392	Bacterial regulatory proteins, gntR family
CH43_3587	PF00005	ABC transporter
CH43_3587	PF08402	TOBE domain
CH43_3588	PF13437	HlyD family secretion protein
CH43_3588	PF13533	Biotin-lipoyl like
CH43_3589	PF00873	AcrB/AcrD/AcrF family
CH43_359	PF00005	ABC transporter
CH43_3592	PF07690	Major Facilitator Superfamily
CH43_3593	PF00512	His Kinase A (phospho-acceptor) domain
CH43_3593	PF00672	HAMP domain
CH43_3593	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3594	PF00072	Response regulator receiver domain
CH43_3594	PF00486	Transcriptional regulatory protein, C terminal
CH43_3595	PF07411	Domain of unknown function (DUF1508)
CH43_3596	PF01136	CH43_3596
CH43_3596	PF16325	CH43_3596
CH43_3597	PF00781	Diacylglycerol kinase catalytic domain
CH43_3598	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
CH43_36	PF13411	MerR HTH family regulatory protein
CH43_360	PF00448	SRP54-type protein, GTPase domain
CH43_360	PF02881	SRP54-type protein, helical bundle domain
CH43_3600	PF08543	Phosphomethylpyrimidine kinase
CH43_3601	PF06092	CH43_3601
CH43_3603	PF00872	CH43_3603
CH43_3605	PF06836	CH43_3605
CH43_3606	PF06836	CH43_3606
CH43_3607	PF06836	CH43_3607
CH43_3609	PF05638	Protein of unknown function (DUF796)
CH43_361	PF03602	Conserved hypothetical protein 95
CH43_3610	PF01797	Transposase IS200 like
CH43_3611	PF00117	Glutamine amidotransferase class-I
CH43_3611	PF00958	GMP synthase C terminal domain
CH43_3611	PF02540	NAD synthase
CH43_3612	PF00478	IMP dehydrogenase / GMP reductase domain
CH43_3612	PF00571	CBS domain
CH43_3613	PF02601	CH43_3613
CH43_3613	PF13742	CH43_3613
CH43_3614	PF07191	zinc-ribbons
CH43_3615	PF03547	CH43_3615
CH43_3616	PF01926	50S ribosome-binding GTPase
CH43_3616	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CH43_3617	PF13360	PQQ-like domain
CH43_3618	PF09976	Tetratricopeptide repeat
CH43_3619	PF03129	Anticodon binding domain
CH43_3619	PF13393	Histidyl-tRNA synthetase
CH43_362	PF06611	CH43_362
CH43_3620	PF04551	GcpE protein
CH43_3621	PF13413	Helix-turn-helix domain
CH43_3621	PF13464	CH43_3621
CH43_3622	PF13181	Tetratricopeptide repeat
CH43_3622	PF13431	Tetratricopeptide repeat
CH43_3623	PF04055	Radical SAM superfamily
CH43_3624	PF00334	Nucleoside diphosphate kinase
CH43_3625	PF00030	Beta/Gamma crystallin
CH43_3625	PF08964	Beta/Gamma crystallin
CH43_3625	PF09101	Exotoxin A binding
CH43_3626	PF03212	Pertactin
CH43_3626	PF03797	Autotransporter beta-domain
CH43_3627	PF03212	Pertactin
CH43_3627	PF03797	Autotransporter beta-domain
CH43_3628	PF03797	Autotransporter beta-domain
CH43_3629	PF07179	CH43_3629
CH43_3629	PF14581	CH43_3629
CH43_363	PF10694	Protein of unknown function (DUF2500)
CH43_3630	PF00883	Cytosol aminopeptidase family, catalytic domain
CH43_3630	PF12404	CH43_3630
CH43_3631	PF04384	Iron-sulphur cluster assembly
CH43_3632	PF00111	2Fe-2S iron-sulfur cluster binding domain
CH43_3633	PF00012	Hsp70 protein
CH43_3634	PF00226	DnaJ domain
CH43_3634	PF07743	HSCB C-terminal oligomerisation domain
CH43_3635	PF01521	Iron-sulphur cluster biosynthesis
CH43_3636	PF01592	NifU-like N terminal domain
CH43_3637	PF00266	Aminotransferase class-V
CH43_3638	PF02082	Transcriptional regulator
CH43_3639	PF00588	SpoU rRNA Methylase family
CH43_364	PF08850	CH43_364
CH43_3640	PF00459	Inositol monophosphatase family
CH43_3641	PF03824	CH43_3641
CH43_3642	PF06226	CH43_3642
CH43_3643	PF12832	MFS_1 like family
CH43_3644	PF00874	PRD domain
CH43_3645	PF13505	Outer membrane protein beta-barrel domain
CH43_3646	PF00464	Serine hydroxymethyltransferase
CH43_3647	PF00042	Globin
CH43_3647	PF00175	Oxidoreductase NAD-binding domain
CH43_3647	PF00970	Oxidoreductase FAD-binding domain
CH43_3648	PF00665	Integrase core domain
CH43_3648	PF02796	Helix-turn-helix domain of resolvase
CH43_3649	PF01695	IstB-like ATP binding protein
CH43_365	PF07947	CH43_365
CH43_3650	PF14502	Helix-turn-helix domain
CH43_3650	PF14503	YhfZ C-terminal domain
CH43_3651	PF00543	Nitrogen regulatory protein P-II
CH43_3652	PF00795	Carbon-nitrogen hydrolase
CH43_3652	PF02540	NAD synthase
CH43_3653	PF00072	Response regulator receiver domain
CH43_3653	PF00158	Sigma-54 interaction domain
CH43_3654	PF13942	CH43_3654
CH43_3655	PF00512	His Kinase A (phospho-acceptor) domain
CH43_3655	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3656	PF01797	Transposase IS200 like
CH43_366	PF00122	E1-E2 ATPase
CH43_366	PF00403	Heavy-metal-associated domain
CH43_366	PF00702	haloacid dehalogenase-like hydrolase
CH43_3660	PF02769	AIR synthase related protein, C-terminal domain
CH43_3660	PF13507	CobB/CobQ-like glutamine amidotransferase domain
CH43_3661	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_3661	PF01464	Transglycosylase SLT domain
CH43_3662	PF14437	CH43_3662
CH43_3663	PF12710	haloacid dehalogenase-like hydrolase
CH43_3664	PF01380	SIS domain
CH43_3665	PF01380	SIS domain
CH43_3665	PF01418	Helix-turn-helix domain, rpiR family
CH43_3666	PF12838	4Fe-4S dicluster domain
CH43_3667	PF01797	Transposase IS200 like
CH43_3668	PF03886	Protein of unknown function (DUF330)
CH43_3669	PF02470	CH43_3669
CH43_367	PF01206	Sulfurtransferase TusA
CH43_3670	PF04403	CH43_3670
CH43_3671	PF00005	ABC transporter
CH43_3671	PF12848	ABC transporter
CH43_3671	PF16326	CH43_3671
CH43_3672	PF01170	Putative RNA methylase family UPF0020
CH43_3672	PF02926	THUMP domain
CH43_3672	PF10672	S-adenosylmethionine-dependent methyltransferase
CH43_3673	PF00111	2Fe-2S iron-sulfur cluster binding domain
CH43_3673	PF03473	MOSC domain
CH43_3673	PF03476	MOSC N-terminal beta barrel domain
CH43_3674	PF07126	CH43_3674
CH43_3675	PF01180	Dihydroorotate dehydrogenase
CH43_3676	PF01433	Peptidase family M1
CH43_3676	PF11940	Domain of unknown function (DUF3458)
CH43_3676	PF17432	CH43_3676
CH43_3677	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
CH43_3678	PF00152	tRNA synthetases class II (D, K and N)
CH43_3678	PF01336	OB-fold nucleic acid binding domain
CH43_3679	PF00267	Gram-negative porin
CH43_368	PF02592	CH43_368
CH43_3680	PF00155	Aminotransferase class I and II
CH43_3681	PF00753	Metallo-beta-lactamase superfamily
CH43_3682	PF05951	CH43_3682
CH43_3683	PF01471	Putative peptidoglycan binding domain
CH43_3683	PF03734	L,D-transpeptidase catalytic domain
CH43_3684	PF01797	Transposase IS200 like
CH43_3685	PF04310	MukB N-terminal
CH43_3685	PF13558	Putative exonuclease SbcCD, C subunit
CH43_3685	PF16330	CH43_3685
CH43_3686	PF04288	MukE-like family
CH43_3687	PF03882	KicB killing factor
CH43_3687	PF17192	CH43_3687
CH43_3687	PF17193	CH43_3687
CH43_3688	PF13847	Methyltransferase domain
CH43_3689	PF03881	Fructosamine kinase
CH43_369	PF08786	Domain of unknown function (DUF1795)
CH43_3690	PF02348	Cytidylyltransferase
CH43_3691	PF03966	Trm112p-like protein
CH43_3692	PF00313	'Cold-shock' DNA-binding domain
CH43_3693	PF07063	Domain of unknown function (DUF1338)
CH43_3694	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
CH43_3695	PF00005	ABC transporter
CH43_3695	PF00664	ABC transporter transmembrane region
CH43_3696	PF00753	Metallo-beta-lactamase superfamily
CH43_3696	PF03772	CH43_3696
CH43_3696	PF13567	CH43_3696
CH43_3697	PF00216	Bacterial DNA-binding protein
CH43_3699	PF00575	S1 RNA binding domain
CH43_37	PF00122	E1-E2 ATPase
CH43_37	PF00403	Heavy-metal-associated domain
CH43_37	PF00702	haloacid dehalogenase-like hydrolase
CH43_370	PF02754	CH43_370
CH43_3700	PF02224	Cytidylate kinase
CH43_3701	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CH43_3702	PF00266	Aminotransferase class-V
CH43_3703	PF03895	YadA-like C-terminal region
CH43_3704	PF03895	YadA-like C-terminal region
CH43_3705	PF00710	Asparaginase
CH43_3706	PF02624	YcaO-like family
CH43_3707	PF01226	Formate/nitrite transporter
CH43_3708	PF01228	Glycine radical
CH43_3708	PF02901	Pyruvate formate lyase
CH43_3709	PF01755	CH43_3709
CH43_371	PF00890	FAD binding domain
CH43_3710	PF04055	Radical SAM superfamily
CH43_3710	PF13353	4Fe-4S single cluster domain
CH43_3711	PF07690	Major Facilitator Superfamily
CH43_3712	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CH43_3712	PF02403	Seryl-tRNA synthetase N-terminal domain
CH43_3713	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_3713	PF12002	MgsA AAA+ ATPase C terminal
CH43_3713	PF16193	CH43_3713
CH43_3715	PF03548	Outer membrane lipoprotein carrier protein LolA
CH43_3716	PF01580	FtsK/SpoIIIE family
CH43_3716	PF09397	Ftsk gamma domain
CH43_3716	PF13491	CH43_3716
CH43_3717	PF01037	AsnC family
CH43_3717	PF13412	Winged helix-turn-helix DNA-binding
CH43_3718	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_3719	PF00005	ABC transporter
CH43_3719	PF00664	ABC transporter transmembrane region
CH43_372	PF01266	FAD dependent oxidoreductase
CH43_372	PF04324	BFD-like [2Fe-2S] binding domain
CH43_3720	PF00005	ABC transporter
CH43_3720	PF00664	ABC transporter transmembrane region
CH43_3721	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
CH43_3722	PF01176	Translation initiation factor 1A / IF-1
CH43_3723	PF01797	Transposase IS200 like
CH43_3724	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_3724	PF02861	Clp amino terminal domain
CH43_3724	PF07724	AAA domain (Cdc48 subfamily)
CH43_3724	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_3725	PF02617	ATP-dependent Clp protease adaptor protein ClpS
CH43_3726	PF00313	'Cold-shock' DNA-binding domain
CH43_3727	PF00005	ABC transporter
CH43_3727	PF02687	CH43_3727
CH43_3727	PF12704	MacB-like periplasmic core domain
CH43_3728	PF16576	CH43_3728
CH43_3729	PF04393	CH43_3729
CH43_373	PF03009	Glycerophosphoryl diester phosphodiesterase family
CH43_3730	PF11398	Protein of unknown function (DUF2813)
CH43_3731	PF03956	CH43_3731
CH43_3732	PF03063	Prismane/CO dehydrogenase family
CH43_3733	PF00111	2Fe-2S iron-sulfur cluster binding domain
CH43_3733	PF00175	Oxidoreductase NAD-binding domain
CH43_3733	PF00970	Oxidoreductase FAD-binding domain
CH43_3734	PF00205	Thiamine pyrophosphate enzyme, central domain
CH43_3734	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CH43_3734	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CH43_3735	PF01212	Beta-eliminating lyase
CH43_3736	PF11066	CH43_3736
CH43_3736	PF13460	NADH(P)-binding
CH43_3737	PF01370	NAD dependent epimerase/dehydratase family
CH43_3738	PF12883	Protein of unknown function (DUF3828)
CH43_3739	PF01817	Chorismate mutase type II
CH43_374	PF03272	CH43_374
CH43_3740	PF00005	ABC transporter
CH43_3741	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_3742	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3743	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3744	PF00892	EamA-like transporter family
CH43_3745	PF10100	CH43_3745
CH43_3746	PF03059	Nicotianamine synthase protein
CH43_3747	PF00005	ABC transporter
CH43_3748	PF01032	FecCD transport family
CH43_375	PF08282	haloacid dehalogenase-like hydrolase
CH43_3750	PF01497	Periplasmic binding protein
CH43_3751	PF01145	SPFH domain / Band 7 family
CH43_3754	PF10767	CH43_3754
CH43_3755	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3756	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3757	PF00005	ABC transporter
CH43_3757	PF08402	TOBE domain
CH43_3758	PF13416	Bacterial extracellular solute-binding protein
CH43_3759	PF10722	Putative bacterial sensory transduction regulator
CH43_376	PF12146	Putative lysophospholipase
CH43_3760	PF07214	CH43_3760
CH43_3761	PF00462	Glutaredoxin
CH43_3762	PF02080	TrkA-C domain
CH43_3762	PF06826	CH43_3762
CH43_3763	PF01569	PAP2 superfamily
CH43_3764	PF01569	PAP2 superfamily
CH43_3765	PF01791	DeoC/LacD family aldolase
CH43_3766	PF00455	CH43_3766
CH43_3766	PF08220	DeoR-like helix-turn-helix domain
CH43_3767	PF03222	Tryptophan/tyrosine permease family
CH43_3768	PF00768	D-alanyl-D-alanine carboxypeptidase
CH43_3768	PF07943	Penicillin-binding protein 5, C-terminal domain
CH43_3769	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_377	PF01810	CH43_377
CH43_3770	PF00005	ABC transporter
CH43_3770	PF09383	NIL domain
CH43_3771	PF03180	NLPA lipoprotein
CH43_3772	PF03171	2OG-Fe(II) oxygenase superfamily
CH43_3772	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
CH43_3773	PF12710	haloacid dehalogenase-like hydrolase
CH43_3774	PF00043	Glutathione S-transferase, C-terminal domain
CH43_3774	PF13417	Glutathione S-transferase, N-terminal domain
CH43_3775	PF00593	TonB dependent receptor
CH43_3775	PF07715	TonB-dependent Receptor Plug Domain
CH43_3776	PF00005	ABC transporter
CH43_3777	PF01032	FecCD transport family
CH43_3778	PF01497	Periplasmic binding protein
CH43_3779	PF01797	Transposase IS200 like
CH43_378	PF01810	CH43_378
CH43_3780	PF00324	Amino acid permease
CH43_3782	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3782	PF03466	LysR substrate binding domain
CH43_3783	PF03601	CH43_3783
CH43_3784	PF01261	Xylose isomerase-like TIM barrel
CH43_3785	PF00577	Outer membrane usher protein
CH43_3785	PF13953	PapC C-terminal domain
CH43_3785	PF13954	PapC N-terminal domain
CH43_3786	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_3786	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_3788	PF17550	CH43_3788
CH43_3789	PF00486	Transcriptional regulatory protein, C terminal
CH43_379	PF00270	DEAD/DEAH box helicase
CH43_379	PF00271	Helicase conserved C-terminal domain
CH43_379	PF00570	HRDC domain
CH43_379	PF09382	RQC domain
CH43_379	PF16124	CH43_379
CH43_3790	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CH43_3790	PF02378	Phosphotransferase system, EIIC
CH43_3791	PF00294	pfkB family carbohydrate kinase
CH43_3792	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CH43_3792	PF00381	PTS HPr component phosphorylation site
CH43_3793	PF00293	NUDIX domain
CH43_3794	PF02653	CH43_3794
CH43_3795	PF00005	ABC transporter
CH43_3796	PF13407	Periplasmic binding protein domain
CH43_3797	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CH43_3798	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_3798	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_3799	PF00171	Aldehyde dehydrogenase family
CH43_38	PF01963	CH43_38
CH43_380	PF02253	Phospholipase A1
CH43_3800	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CH43_3801	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CH43_3801	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CH43_3802	PF13561	Enoyl-(Acyl carrier protein) reductase
CH43_3803	PF03692	CH43_3803
CH43_3804	PF03222	Tryptophan/tyrosine permease family
CH43_3805	PF01132	Elongation factor P (EF-P) OB domain
CH43_3805	PF08207	Elongation factor P (EF-P) KOW-like domain
CH43_3805	PF09285	Elongation factor P, C-terminal
CH43_3806	PF03786	D-mannonate dehydratase (UxuA)
CH43_3807	PF01232	Mannitol dehydrogenase Rossmann domain
CH43_3807	PF08125	Mannitol dehydrogenase C-terminal domain
CH43_3808	PF00392	Bacterial regulatory proteins, gntR family
CH43_3808	PF07729	FCD domain
CH43_381	PF03061	Thioesterase superfamily
CH43_3810	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CH43_3810	PF07683	Cobalamin synthesis protein cobW C-terminal domain
CH43_3811	PF01569	PAP2 superfamily
CH43_3812	PF00877	NlpC/P60 family
CH43_3814	PF00563	EAL domain
CH43_3814	PF12792	CH43_3814
CH43_3815	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_3816	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3817	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3817	PF12911	CH43_3817
CH43_3818	PF00005	ABC transporter
CH43_3818	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CH43_3819	PF13989	CH43_3819
CH43_382	PF00892	EamA-like transporter family
CH43_3820	PF07690	Major Facilitator Superfamily
CH43_3821	PF00849	RNA pseudouridylate synthase
CH43_3821	PF01479	S4 domain
CH43_3822	PF00271	Helicase conserved C-terminal domain
CH43_3822	PF04851	Type III restriction enzyme, res subunit
CH43_3823	PF01386	Ribosomal L25p family
CH43_3824	PF01797	Transposase IS200 like
CH43_3825	PF04245	CH43_3825
CH43_3826	PF07208	Protein of unknown function (DUF1414)
CH43_3827	PF00884	Sulfatase
CH43_3827	PF11893	CH43_3827
CH43_383	PF01544	CorA-like Mg2+ transporter protein
CH43_3830	PF12639	DNase/tRNase domain of colicin-like bacteriocin
CH43_3834	PF00232	Glycosyl hydrolase family 1
CH43_3836	PF01380	SIS domain
CH43_3836	PF01418	Helix-turn-helix domain, rpiR family
CH43_3837	PF07484	Phage Tail Collar Domain
CH43_3838	PF10076	CH43_3838
CH43_3839	PF10076	CH43_3839
CH43_384	PF09370	TIM-barrel signal transduction protein
CH43_3840	PF04865	CH43_3840
CH43_3841	PF07409	CH43_3841
CH43_3844	PF05954	Phage late control gene D protein (GPD)
CH43_3845	PF07157	CH43_3845
CH43_3847	PF10109	CH43_3847
CH43_3848	PF10618	CH43_3848
CH43_3849	PF04984	Phage tail sheath protein
CH43_3849	PF17482	CH43_3849
CH43_385	PF06792	Uncharacterised protein family (UPF0261)
CH43_3850	PF10948	CH43_3850
CH43_3853	PF01261	Xylose isomerase-like TIM barrel
CH43_3854	PF00455	CH43_3854
CH43_3854	PF08220	DeoR-like helix-turn-helix domain
CH43_3855	PF00596	Class II Aldolase and Adducin N-terminal domain
CH43_3856	PF07005	Protein of unknown function, DUF1537
CH43_3856	PF17042	CH43_3856
CH43_3857	PF06530	CH43_3857
CH43_3858	PF00717	Peptidase S24-like
CH43_3858	PF01381	Helix-turn-helix
CH43_3859	PF06183	DinI-like family
CH43_3861	PF01278	Omptin family
CH43_3862	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_3862	PF00672	HAMP domain
CH43_3862	PF02743	Cache domain
CH43_3863	PF12706	Beta-lactamase superfamily domain
CH43_3864	PF13347	MFS/sugar transport protein
CH43_3865	PF00144	Beta-lactamase
CH43_3868	PF00267	Gram-negative porin
CH43_387	PF00580	UvrD/REP helicase N-terminal domain
CH43_387	PF13361	UvrD-like helicase C-terminal domain
CH43_3872	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3873	PF01627	Hpt domain
CH43_3873	PF16359	CH43_3873
CH43_3874	PF00072	Response regulator receiver domain
CH43_3874	PF00196	Bacterial regulatory proteins, luxR family
CH43_3875	PF00072	Response regulator receiver domain
CH43_3875	PF00512	His Kinase A (phospho-acceptor) domain
CH43_3875	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_3875	PF09456	RcsC Alpha-Beta-Loop (ABL)
CH43_3876	PF00521	DNA gyrase/topoisomerase IV, subunit A
CH43_3876	PF03989	DNA gyrase C-terminal domain, beta-propeller
CH43_3877	PF13489	Methyltransferase domain
CH43_3878	PF00317	Ribonucleotide reductase, all-alpha domain
CH43_3878	PF02867	Ribonucleotide reductase, barrel domain
CH43_3878	PF03477	ATP cone domain
CH43_3879	PF00268	Ribonucleotide reductase, small chain
CH43_388	PF00702	haloacid dehalogenase-like hydrolase
CH43_3880	PF00111	2Fe-2S iron-sulfur cluster binding domain
CH43_3881	PF03974	Ecotin
CH43_3882	PF00994	Probable molybdopterin binding domain
CH43_3883	PF03222	Tryptophan/tyrosine permease family
CH43_3884	PF07437	CH43_3884
CH43_3885	PF00199	Catalase
CH43_3885	PF06628	Catalase-related immune-responsive
CH43_3886	PF06733	DEAD_2
CH43_3886	PF13307	Helicase C-terminal domain
CH43_3887	PF00267	Gram-negative porin
CH43_3888	PF00892	EamA-like transporter family
CH43_389	PF00589	Phage integrase family
CH43_389	PF02899	Phage integrase, N-terminal SAM-like domain
CH43_3890	PF01276	Orn/Lys/Arg decarboxylase, major domain
CH43_3890	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
CH43_3891	PF00872	CH43_3891
CH43_3892	PF01276	Orn/Lys/Arg decarboxylase, major domain
CH43_3892	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
CH43_3893	PF13520	Amino acid permease
CH43_3894	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3895	PF00005	ABC transporter
CH43_3896	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3897	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CH43_3898	PF00581	Rhodanese-like domain
CH43_3899	PF00282	Pyridoxal-dependent decarboxylase conserved domain
CH43_39	PF04073	Aminoacyl-tRNA editing domain
CH43_390	PF04340	Protein of unknown function, DUF484
CH43_3900	PF13640	2OG-Fe(II) oxygenase superfamily
CH43_3901	PF00005	ABC transporter
CH43_3902	PF00005	ABC transporter
CH43_3902	PF12399	Branched-chain amino acid ATP-binding cassette transporter
CH43_3903	PF02653	CH43_3903
CH43_3904	PF02653	CH43_3904
CH43_3904	PF13646	HEAT repeats
CH43_3905	PF13433	Periplasmic binding protein domain
CH43_3906	PF07308	CH43_3906
CH43_3907	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3908	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3909	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
CH43_391	PF01678	Diaminopimelate epimerase
CH43_3910	PF00005	ABC transporter
CH43_3911	PF04226	CH43_3911
CH43_3912	PF05076	Suppressor of fused protein (SUFU)
CH43_3913	PF01844	HNH endonuclease
CH43_3914	PF01928	CYTH domain
CH43_3915	PF01565	FAD binding domain
CH43_3915	PF09330	D-lactate dehydrogenase, membrane binding
CH43_3916	PF00768	D-alanyl-D-alanine carboxypeptidase
CH43_3918	PF01207	Dihydrouridine synthase (Dus)
CH43_392	PF13627	CH43_392
CH43_3920	PF01797	Transposase IS200 like
CH43_3921	PF03825	CH43_3921
CH43_3922	PF01048	Phosphorylase superfamily
CH43_3923	PF00892	EamA-like transporter family
CH43_3924	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3924	PF03466	LysR substrate binding domain
CH43_3925	PF02028	BCCT family transporter
CH43_3926	PF00440	Bacterial regulatory proteins, tetR family
CH43_3926	PF13977	Bacterial transcriptional repressor
CH43_3927	PF00171	Aldehyde dehydrogenase family
CH43_3928	PF00732	GMC oxidoreductase
CH43_3928	PF05199	GMC oxidoreductase
CH43_3929	PF01797	Transposase IS200 like
CH43_393	PF01491	Frataxin-like domain
CH43_3930	PF01027	Inhibitor of apoptosis-promoting Bax1
CH43_3931	PF02391	MoaE protein
CH43_3932	PF02597	ThiS family
CH43_3933	PF01967	MoaC family
CH43_3934	PF04055	Radical SAM superfamily
CH43_3934	PF06463	Molybdenum Cofactor Synthesis C
CH43_3934	PF13353	4Fe-4S single cluster domain
CH43_3936	PF01933	Uncharacterised protein family UPF0052
CH43_3937	PF09905	Uncharacterized conserved protein (DUF2132)
CH43_3938	PF00271	Helicase conserved C-terminal domain
CH43_3938	PF02151	UvrB/uvrC motif
CH43_3938	PF04851	Type III restriction enzyme, res subunit
CH43_3938	PF12344	Ultra-violet resistance protein B
CH43_3939	PF00005	ABC transporter
CH43_394	PF01295	CH43_394
CH43_394	PF12633	CH43_394
CH43_3940	PF13500	AAA domain
CH43_3941	PF08241	Methyltransferase domain
CH43_3942	PF00155	Aminotransferase class I and II
CH43_3943	PF04055	Radical SAM superfamily
CH43_3943	PF06968	Biotin and Thiamin Synthesis associated domain
CH43_3944	PF00202	Aminotransferase class-III
CH43_3945	PF10282	Lactonase, 7-bladed beta-propeller
CH43_3946	PF08282	haloacid dehalogenase-like hydrolase
CH43_3947	PF00005	ABC transporter
CH43_3947	PF03459	TOBE domain
CH43_3948	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_3949	PF13531	Bacterial extracellular solute-binding protein
CH43_395	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
CH43_395	PF03900	Porphobilinogen deaminase, C-terminal domain
CH43_3950	PF10766	Protein of unknown function (DUF2592)
CH43_3951	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_3951	PF03459	TOBE domain
CH43_3952	PF00005	ABC transporter
CH43_3956	PF16363	CH43_3956
CH43_3957	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
CH43_3957	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
CH43_3958	PF00288	GHMP kinases N terminal domain
CH43_3958	PF08544	GHMP kinases C terminal
CH43_3958	PF10509	Galactokinase galactose-binding signature
CH43_396	PF02602	Uroporphyrinogen-III synthase HemD
CH43_3960	PF01263	Aldose 1-epimerase
CH43_3961	PF07769	CH43_3961
CH43_3962	PF00300	Histidine phosphatase superfamily (branch 1)
CH43_3965	PF01545	Cation efflux family
CH43_3966	PF04973	CH43_3966
CH43_3967	PF02445	Quinolinate synthetase A protein
CH43_397	PF04375	CH43_397
CH43_3972	PF13174	Tetratricopeptide repeat
CH43_3972	PF13432	Tetratricopeptide repeat
CH43_3972	PF16331	CH43_3972
CH43_3973	PF00691	OmpA family
CH43_3974	PF04052	TolB amino-terminal domain
CH43_3974	PF07676	WD40-like Beta Propeller Repeat
CH43_3975	PF06519	TolA C-terminal
CH43_3976	PF02472	Biopolymer transport protein ExbD/TolR
CH43_3977	PF01618	CH43_3977
CH43_3978	PF03061	Thioesterase superfamily
CH43_3979	PF09600	CH43_3979
CH43_398	PF07219	CH43_398
CH43_3980	PF08173	CH43_3980
CH43_3981	PF02322	CH43_3981
CH43_3982	PF01654	CH43_3982
CH43_3983	PF01797	Transposase IS200 like
CH43_3984	PF00549	CoA-ligase
CH43_3984	PF02629	CoA binding domain
CH43_3985	PF00549	CoA-ligase
CH43_3985	PF08442	ATP-grasp domain
CH43_3986	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CH43_3986	PF00364	Biotin-requiring enzyme
CH43_3986	PF02817	e3 binding domain
CH43_3987	PF00676	Dehydrogenase E1 component
CH43_3987	PF02779	Transketolase, pyrimidine binding domain
CH43_3987	PF16078	CH43_3987
CH43_3987	PF16870	CH43_3987
CH43_3988	PF13085	2Fe-2S iron-sulfur cluster binding domain
CH43_3988	PF13534	4Fe-4S dicluster domain
CH43_3989	PF00890	FAD binding domain
CH43_3989	PF02910	Fumarate reductase flavoprotein C-term
CH43_399	PF01797	Transposase IS200 like
CH43_3991	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
CH43_3992	PF00285	Citrate synthase
CH43_3993	PF01025	GrpE
CH43_3994	PF01513	ATP-NAD kinase
CH43_3995	PF02463	RecF/RecN/SMC N terminal domain
CH43_3996	PF04355	SmpA / OmlA family
CH43_3997	PF03658	RnfH family Ubiquitin
CH43_3998	PF03364	Polyketide cyclase / dehydrase and lipid transport
CH43_3999	PF01668	SmpB protein
CH43_4	PF00248	Aldo/keto reductase family
CH43_4000	PF01797	Transposase IS200 like
CH43_4001	PF00589	Phage integrase family
CH43_4001	PF13356	Domain of unknown function (DUF4102)
CH43_4002	PF14130	CH43_4002
CH43_4004	PF12834	CH43_4004
CH43_4004	PF12835	Integrase
CH43_4005	PF05930	Prophage CP4-57 regulatory protein (AlpA)
CH43_4006	PF10554	CH43_4006
CH43_4007	PF08273	Zinc-binding domain of primase-helicase
CH43_4007	PF13362	Toprim domain
CH43_4008	PF13481	AAA domain
CH43_4011	PF05973	CH43_4011
CH43_4013	PF00665	Integrase core domain
CH43_4013	PF02796	Helix-turn-helix domain of resolvase
CH43_4014	PF01695	IstB-like ATP binding protein
CH43_4015	PF13356	Domain of unknown function (DUF4102)
CH43_4016	PF01527	Transposase
CH43_4018	PF12697	Alpha/beta hydrolase family
CH43_4020	PF01402	Ribbon-helix-helix protein, copG family
CH43_4021	PF00258	Flavodoxin
CH43_4022	PF01475	Ferric uptake regulator family
CH43_4023	PF00728	Glycosyl hydrolase family 20, catalytic domain
CH43_4023	PF02838	Glycosyl hydrolase family 20, domain 2
CH43_4023	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
CH43_4024	PF03173	Putative carbohydrate binding domain
CH43_4025	PF03573	outer membrane porin, OprD family
CH43_4026	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CH43_4026	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
CH43_4027	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CH43_4027	PF00367	phosphotransferase system, EIIB
CH43_4027	PF02378	Phosphotransferase system, EIIC
CH43_4028	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CH43_4029	PF01979	Amidohydrolase family
CH43_4030	PF00480	ROK family
CH43_4030	PF01047	MarR family
CH43_4031	PF13242	HAD-hyrolase-like
CH43_4031	PF13344	Haloacid dehalogenase-like hydrolase
CH43_4032	PF00733	Asparagine synthase
CH43_4032	PF13537	Glutamine amidotransferase domain
CH43_4039	PF01494	FAD binding domain
CH43_4040	PF00919	Uncharacterized protein family UPF0004
CH43_4040	PF01938	TRAM domain
CH43_4040	PF04055	Radical SAM superfamily
CH43_4041	PF02562	PhoH-like protein
CH43_4042	PF02130	Uncharacterized protein family UPF0054
CH43_4043	PF00571	CBS domain
CH43_4043	PF03471	Transporter associated domain
CH43_4044	PF00795	Carbon-nitrogen hydrolase
CH43_4045	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_4046	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_4047	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_4048	PF00005	ABC transporter
CH43_4049	PF07295	CH43_4049
CH43_405	PF00324	Amino acid permease
CH43_4050	PF00133	tRNA synthetases class I (I, L, M and V)
CH43_4050	PF08264	Anticodon-binding domain of tRNA
CH43_4050	PF13603	Leucyl-tRNA synthetase, Domain 2
CH43_4051	PF04390	Lipopolysaccharide-assembly
CH43_4052	PF06144	DNA polymerase III, delta subunit
CH43_4052	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
CH43_4053	PF01467	Cytidylyltransferase
CH43_4054	PF02410	Oligomerisation domain
CH43_4055	PF02590	Predicted SPOUT methyltransferase
CH43_4056	PF00905	Penicillin binding protein transpeptidase domain
CH43_4056	PF03717	Penicillin-binding Protein dimerisation domain
CH43_4057	PF01098	CH43_4057
CH43_4058	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
CH43_4058	PF05036	Sporulation related domain
CH43_4059	PF00768	D-alanyl-D-alanine carboxypeptidase
CH43_4059	PF07943	Penicillin-binding protein 5, C-terminal domain
CH43_406	PF03808	CH43_406
CH43_4060	PF04359	Protein of unknown function (DUF493)
CH43_4061	PF03099	Biotin/lipoate A/B protein ligase family
CH43_4062	PF04055	Radical SAM superfamily
CH43_4062	PF16881	CH43_4062
CH43_4063	PF02416	mttA/Hcf106 family
CH43_4064	PF02537	CH43_4064
CH43_4065	PF00313	'Cold-shock' DNA-binding domain
CH43_4066	PF00313	'Cold-shock' DNA-binding domain
CH43_4067	PF00196	Bacterial regulatory proteins, luxR family
CH43_407	PF06899	CH43_407
CH43_4070	PF08971	Glycogen synthesis protein
CH43_4071	PF03992	Antibiotic biosynthesis monooxygenase
CH43_4072	PF00005	ABC transporter
CH43_4072	PF00664	ABC transporter transmembrane region
CH43_4074	PF04962	KduI/IolB family
CH43_4075	PF01261	Xylose isomerase-like TIM barrel
CH43_4076	PF00294	pfkB family carbohydrate kinase
CH43_4076	PF09863	Uncharacterized protein conserved in bacteria (DUF2090)
CH43_4077	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_4077	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CH43_4078	PF02653	CH43_4078
CH43_4079	PF00005	ABC transporter
CH43_408	PF07429	CH43_408
CH43_4080	PF13407	Periplasmic binding protein domain
CH43_4081	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CH43_4082	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CH43_4083	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CH43_4084	PF00171	Aldehyde dehydrogenase family
CH43_4084	PF00205	Thiamine pyrophosphate enzyme, central domain
CH43_4084	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CH43_4086	PF01380	SIS domain
CH43_4086	PF01418	Helix-turn-helix domain, rpiR family
CH43_4087	PF07274	CH43_4087
CH43_4089	PF00207	Alpha-2-macroglobulin family
CH43_4089	PF01835	MG2 domain
CH43_4089	PF07703	Alpha-2-macroglobulin family N-terminal region
CH43_4089	PF11974	Alpha-2-macroglobulin MG1 domain
CH43_409	PF01943	CH43_409
CH43_4090	PF00905	Penicillin binding protein transpeptidase domain
CH43_4090	PF00912	Transglycosylase
CH43_4090	PF06832	CH43_4090
CH43_4091	PF13693	Winged helix-turn-helix DNA-binding
CH43_4094	PF06836	CH43_4094
CH43_4095	PF06836	CH43_4095
CH43_4096	PF05638	Protein of unknown function (DUF796)
CH43_4099	PF03212	Pertactin
CH43_4099	PF03797	Autotransporter beta-domain
CH43_410	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CH43_4100	PF11459	CH43_4100
CH43_4100	PF17194	CH43_4100
CH43_4102	PF00872	CH43_4102
CH43_4103	PF09925	CH43_4103
CH43_4103	PF14351	CH43_4103
CH43_4104	PF14345	CH43_4104
CH43_4106	PF04754	CH43_4106
CH43_4107	PF00239	Resolvase, N terminal domain
CH43_4108	PF05016	Plasmid stabilisation system protein
CH43_4109	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
CH43_411	PF00583	Acetyltransferase (GNAT) family
CH43_4110	PF13614	AAA domain
CH43_4111	PF02195	ParB-like nuclease domain
CH43_4111	PF08775	ParB family
CH43_4112	PF13191	AAA ATPase domain
CH43_4114	PF01555	DNA methylase
CH43_4116	PF07128	CH43_4116
CH43_4118	PF07275	Antirestriction protein (ArdA)
CH43_4119	PF06006	Bacterial protein of unknown function (DUF905)
CH43_412	PF00483	Nucleotidyl transferase
CH43_4120	PF02195	ParB-like nuclease domain
CH43_4121	PF00665	Integrase core domain
CH43_4121	PF02796	Helix-turn-helix domain of resolvase
CH43_4122	PF01695	IstB-like ATP binding protein
CH43_4123	PF02413	CH43_4123
CH43_4124	PF03335	Phage tail fibre repeat
CH43_4124	PF03406	CH43_4124
CH43_4124	PF07484	Phage Tail Collar Domain
CH43_4125	PF14301	CH43_4125
CH43_4126	PF09327	CH43_4126
CH43_4126	PF12421	CH43_4126
CH43_4126	PF13550	CH43_4126
CH43_4128	PF00877	NlpC/P60 family
CH43_4128	PF14464	Prokaryotic homologs of the JAB domain
CH43_4129	PF05100	CH43_4129
CH43_413	PF16363	CH43_413
CH43_4130	PF05939	CH43_4130
CH43_4131	PF09718	CH43_4131
CH43_4134	PF02368	Bacterial Ig-like domain (group 2)
CH43_414	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CH43_414	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CH43_414	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CH43_4140	PF02368	Bacterial Ig-like domain (group 2)
CH43_4144	PF03237	Terminase-like family
CH43_4149	PF00005	ABC transporter
CH43_415	PF02350	UDP-N-acetylglucosamine 2-epimerase
CH43_4150	PF02195	ParB-like nuclease domain
CH43_4151	PF02195	ParB-like nuclease domain
CH43_4152	PF00270	DEAD/DEAH box helicase
CH43_4152	PF00271	Helicase conserved C-terminal domain
CH43_4155	PF03614	CH43_4155
CH43_4159	PF01797	Transposase IS200 like
CH43_416	PF02706	Chain length determinant protein
CH43_4163	PF01797	Transposase IS200 like
CH43_4164	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CH43_4165	PF00268	Ribonucleotide reductase, small chain
CH43_4166	PF00317	Ribonucleotide reductase, all-alpha domain
CH43_4166	PF02867	Ribonucleotide reductase, barrel domain
CH43_4166	PF03477	ATP cone domain
CH43_4169	PF13476	AAA domain
CH43_417	PF00953	Glycosyl transferase family 4
CH43_4171	PF00149	Calcineurin-like phosphoesterase
CH43_4172	PF09084	NMT1/THI5 like
CH43_4174	PF01051	Initiator Replication protein
CH43_4179	PF10765	Protein of unknown function (DUF2591)
CH43_418	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CH43_418	PF07497	Rho termination factor, RNA-binding domain
CH43_418	PF07498	Rho termination factor, N-terminal domain
CH43_4180	PF01145	SPFH domain / Band 7 family
CH43_4182	PF00154	recA bacterial DNA recombination protein
CH43_4184	PF01367	5'-3' exonuclease, C-terminal SAM fold
CH43_4184	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CH43_419	PF00085	Thioredoxin
CH43_4190	PF02811	PHP domain
CH43_4190	PF07733	Bacterial DNA polymerase III alpha subunit
CH43_4190	PF14579	Helix-hairpin-helix motif
CH43_4191	PF07728	AAA domain (dynein-related subfamily)
CH43_4192	PF06213	CH43_4192
CH43_4192	PF11775	CH43_4192
CH43_4194	PF00589	Phage integrase family
CH43_4196	PF09255	Caf1 Capsule antigen
CH43_4197	PF00577	Outer membrane usher protein
CH43_4197	PF13953	PapC C-terminal domain
CH43_4197	PF13954	PapC N-terminal domain
CH43_4198	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_4198	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_4199	PF06445	GyrI-like small molecule binding domain
CH43_4199	PF12833	Helix-turn-helix domain
CH43_42	PF02872	5'-nucleotidase, C-terminal domain
CH43_420	PF00270	DEAD/DEAH box helicase
CH43_420	PF00271	Helicase conserved C-terminal domain
CH43_4204	PF01068	ATP dependent DNA ligase domain
CH43_4207	PF13643	CH43_4207
CH43_4209	PF00872	CH43_4209
CH43_421	PF02541	Ppx/GppA phosphatase family
CH43_4210	PF07916	CH43_4210
CH43_4211	PF06122	CH43_4211
CH43_4212	PF13728	F plasmid transfer operon protein
CH43_4213	PF09679	CH43_4213
CH43_4214	PF13728	F plasmid transfer operon protein
CH43_4216	PF06986	CH43_4216
CH43_4217	PF09673	CH43_4217
CH43_4218	PF06834	CH43_4218
CH43_4219	PF12477	CH43_4219
CH43_422	PF00580	UvrD/REP helicase N-terminal domain
CH43_422	PF13361	UvrD-like helicase C-terminal domain
CH43_4220	PF09677	CH43_4220
CH43_4221	PF11130	CH43_4221
CH43_4222	PF07296	CH43_4222
CH43_4225	PF01258	Prokaryotic dksA/traR C4-type zinc finger
CH43_4226	PF09676	CH43_4226
CH43_4227	PF03743	Bacterial conjugation TrbI-like protein
CH43_4228	PF06586	CH43_4228
CH43_4229	PF05309	CH43_4229
CH43_423	PF13616	PPIC-type PPIASE domain
CH43_4230	PF07178	CH43_4230
CH43_4231	PF05513	CH43_4231
CH43_4232	PF00872	CH43_4232
CH43_4233	PF10412	Type IV secretion-system coupling protein DNA-binding domain
CH43_4233	PF12615	CH43_4233
CH43_4234	PF07057	DNA helicase TraI
CH43_4234	PF08751	TrwC relaxase
CH43_4234	PF13604	AAA domain
CH43_4235	PF05857	CH43_4235
CH43_4236	PF04352	ProQ/FINO family
CH43_4236	PF12602	Fertility inhibition protein N terminal
CH43_4237	PF13462	Thioredoxin
CH43_4238	PF13091	PLD-like domain
CH43_4239	PF02387	CH43_4239
CH43_424	PF05096	Glutamine cyclotransferase
CH43_4241	PF01548	CH43_4241
CH43_4241	PF02371	CH43_4241
CH43_4244	PF03543	Yersinia/Haemophilus virulence surface antigen
CH43_4245	PF05932	Tir chaperone protein (CesT) family
CH43_4248	PF00872	CH43_4248
CH43_4249	PF12468	Type III secretion system leucine rich repeat protein
CH43_425	PF16970	CH43_425
CH43_4251	PF00872	CH43_4251
CH43_4252	PF05844	YopD protein
CH43_4253	PF04888	CH43_4253
CH43_4254	PF07720	Tetratricopeptide repeat
CH43_4255	PF04792	V antigen (LcrV) protein
CH43_4256	PF07216	CH43_4256
CH43_4257	PF09621	CH43_4257
CH43_4258	PF00771	FHIPEP family
CH43_426	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_426	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_4260	PF09474	CH43_4260
CH43_4262	PF09059	TyeA
CH43_4263	PF07201	HrpJ-like domain
CH43_4264	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CH43_4264	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CH43_4265	PF07321	Type III secretion protein YscO
CH43_4266	PF02120	Flagellar hook-length control protein FliK
CH43_4267	PF01052	Surface presentation of antigens (SPOA)
CH43_4268	PF00813	CH43_4268
CH43_4269	PF01313	CH43_4269
CH43_427	PF00577	Outer membrane usher protein
CH43_427	PF13953	PapC C-terminal domain
CH43_427	PF13954	PapC N-terminal domain
CH43_4270	PF01311	CH43_4270
CH43_4271	PF01312	FlhB HrpN YscU SpaS Family
CH43_4272	PF09619	Type III secretion system lipoprotein chaperone (YscW)
CH43_4273	PF02311	AraC-like ligand binding domain
CH43_4273	PF12833	Helix-turn-helix domain
CH43_4274	PF05932	Tir chaperone protein (CesT) family
CH43_4275	PF00263	CH43_4275
CH43_4275	PF03958	Bacterial type II/III secretion system short domain
CH43_4276	PF16693	CH43_4276
CH43_4276	PF16697	CH43_4276
CH43_4277	PF08988	Protein of unknown function (DUF1895)
CH43_4278	PF09392	Type III secretion needle MxiH like
CH43_4279	PF09477	Bacterial type II secretion system chaperone protein (type_III_yscG)
CH43_428	PF00419	Fimbrial protein
CH43_4280	PF09025	YopR Core
CH43_4281	PF17001	CH43_4281
CH43_4282	PF01514	Secretory protein of YscJ/FliF family
CH43_4283	PF06578	CH43_4283
CH43_4284	PF02108	CH43_4284
CH43_4285	PF09013	YopH, N-terminal
CH43_4286	PF01527	Transposase
CH43_4288	PF00665	Integrase core domain
CH43_4288	PF02796	Helix-turn-helix domain of resolvase
CH43_4289	PF01695	IstB-like ATP binding protein
CH43_429	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_429	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_4290	PF13683	CH43_4290
CH43_4291	PF00102	Protein-tyrosine phosphatase
CH43_4291	PF09013	YopH, N-terminal
CH43_4292	PF13683	CH43_4292
CH43_4293	PF03421	CH43_4293
CH43_4294	PF00069	Protein kinase domain
CH43_4294	PF09632	Rac1-binding domain
CH43_4297	PF13683	CH43_4297
CH43_43	PF00149	Calcineurin-like phosphoesterase
CH43_430	PF01320	Colicin immunity protein / pyocin immunity protein
CH43_4300	PF02387	CH43_4300
CH43_4301	PF10723	Replication regulatory protein RepB
CH43_4302	PF13276	CH43_4302
CH43_4303	PF00665	Integrase core domain
CH43_4304	PF01527	Transposase
CH43_4307	PF03895	YadA-like C-terminal region
CH43_4307	PF05658	Head domain of trimeric autotransporter adhesin
CH43_4307	PF05662	Coiled stalk of trimeric autotransporter adhesin
CH43_4310	PF01526	CH43_4310
CH43_4310	PF13700	CH43_4310
CH43_4312	PF00239	Resolvase, N terminal domain
CH43_4312	PF02796	Helix-turn-helix domain of resolvase
CH43_4315	PF01527	Transposase
CH43_4316	PF13276	CH43_4316
CH43_4316	PF13683	CH43_4316
CH43_4317	PF05932	Tir chaperone protein (CesT) family
CH43_4318	PF01695	IstB-like ATP binding protein
CH43_4319	PF00665	Integrase core domain
CH43_4320	PF13683	CH43_4320
CH43_4321	PF05932	Tir chaperone protein (CesT) family
CH43_4322	PF03545	Yersinia virulence determinant (YopE)
CH43_4322	PF09020	YopE, N terminal
CH43_4323	PF05016	Plasmid stabilisation system protein
CH43_4324	PF03693	Uncharacterised protein family (UPF0156)
CH43_4326	PF02195	ParB-like nuclease domain
CH43_4327	PF00376	MerR family regulatory protein
CH43_4327	PF13614	AAA domain
CH43_4328	PF13683	CH43_4328
CH43_4329	PF13276	CH43_4329
CH43_433	PF06958	S-type Pyocin
CH43_4330	PF01527	Transposase
CH43_4331	PF05818	CH43_4331
CH43_435	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CH43_435	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
CH43_436	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_436	PF03466	LysR substrate binding domain
CH43_438	PF11692	CH43_438
CH43_439	PF06092	CH43_439
CH43_440	PF06092	CH43_440
CH43_441	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_441	PF00585	C-terminal regulatory domain of Threonine dehydratase
CH43_442	PF00920	Dehydratase family
CH43_443	PF01063	Aminotransferase class IV
CH43_444	PF13710	ACT domain
CH43_445	PF00205	Thiamine pyrophosphate enzyme, central domain
CH43_445	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CH43_445	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CH43_446	PF01078	Magnesium chelatase, subunit ChlI
CH43_446	PF13335	CH43_446
CH43_446	PF13541	Subunit ChlI of Mg-chelatase
CH43_447	PF04219	CH43_447
CH43_448	PF02653	CH43_448
CH43_449	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_449	PF03466	LysR substrate binding domain
CH43_450	PF02653	CH43_450
CH43_451	PF00005	ABC transporter
CH43_452	PF13407	Periplasmic binding protein domain
CH43_461	PF01808	AICARFT/IMPCHase bienzyme
CH43_461	PF02142	MGS-like domain
CH43_462	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CH43_462	PF02843	Phosphoribosylglycinamide synthetase, C domain
CH43_462	PF02844	Phosphoribosylglycinamide synthetase, N domain
CH43_463	PF07356	CH43_463
CH43_464	PF00216	Bacterial DNA-binding protein
CH43_465	PF04222	Protein of unknown function (DUF416)
CH43_466	PF04493	Endonuclease V
CH43_467	PF01208	Uroporphyrinogen decarboxylase (URO-D)
CH43_469	PF00293	NUDIX domain
CH43_469	PF09297	NADH pyrophosphatase zinc ribbon domain
CH43_47	PF00999	Sodium/hydrogen exchanger family
CH43_47	PF02254	TrkA-N domain
CH43_470	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
CH43_471	PF01964	ThiC family
CH43_471	PF13667	ThiC-associated domain
CH43_472	PF02581	Thiamine monophosphate synthase/TENI
CH43_473	PF00899	ThiF family
CH43_474	PF02597	ThiS family
CH43_479	PF00623	RNA polymerase Rpb1, domain 2
CH43_479	PF04983	RNA polymerase Rpb1, domain 3
CH43_479	PF04997	RNA polymerase Rpb1, domain 1
CH43_479	PF04998	RNA polymerase Rpb1, domain 5
CH43_479	PF05000	RNA polymerase Rpb1, domain 4
CH43_48	PF00294	pfkB family carbohydrate kinase
CH43_480	PF00562	RNA polymerase Rpb2, domain 6
CH43_480	PF04560	RNA polymerase Rpb2, domain 7
CH43_480	PF04561	RNA polymerase Rpb2, domain 2
CH43_480	PF04563	RNA polymerase beta subunit
CH43_480	PF04565	RNA polymerase Rpb2, domain 3
CH43_480	PF10385	RNA polymerase beta subunit external 1 domain
CH43_482	PF00542	Ribosomal protein L7/L12 C-terminal domain
CH43_482	PF16320	CH43_482
CH43_483	PF00466	Ribosomal protein L10
CH43_484	PF00687	Ribosomal protein L1p/L10e family
CH43_485	PF00298	Ribosomal protein L11, RNA binding domain
CH43_485	PF03946	Ribosomal protein L11, N-terminal domain
CH43_486	PF00467	KOW motif
CH43_486	PF02357	Transcription termination factor nusG
CH43_487	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
CH43_488	PF00009	Elongation factor Tu GTP binding domain
CH43_488	PF03143	Elongation factor Tu C-terminal domain
CH43_488	PF03144	Elongation factor Tu domain 2
CH43_49	PF02706	Chain length determinant protein
CH43_493	PF01695	IstB-like ATP binding protein
CH43_494	PF01695	IstB-like ATP binding protein
CH43_495	PF00665	Integrase core domain
CH43_495	PF02796	Helix-turn-helix domain of resolvase
CH43_496	PF12146	Putative lysophospholipase
CH43_497	PF00324	Amino acid permease
CH43_498	PF00221	Aromatic amino acid lyase
CH43_499	PF01175	Urocanase
CH43_499	PF17391	CH43_499
CH43_499	PF17392	CH43_499
CH43_5	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_5	PF03466	LysR substrate binding domain
CH43_50	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CH43_50	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CH43_50	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CH43_50	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CH43_500	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_501	PF00156	Phosphoribosyl transferase domain
CH43_502	PF00892	EamA-like transporter family
CH43_503	PF13535	ATP-grasp domain
CH43_504	PF01497	Periplasmic binding protein
CH43_505	PF01032	FecCD transport family
CH43_506	PF01032	FecCD transport family
CH43_507	PF13310	CH43_507
CH43_508	PF00005	ABC transporter
CH43_51	PF00535	Glycosyl transferase family 2
CH43_510	PF01381	Helix-turn-helix
CH43_511	PF13737	CH43_511
CH43_513	PF04606	CH43_513
CH43_515	PF00589	Phage integrase family
CH43_515	PF13356	Domain of unknown function (DUF4102)
CH43_517	PF12833	Helix-turn-helix domain
CH43_517	PF13377	Periplasmic binding protein-like domain
CH43_518	PF02653	CH43_518
CH43_519	PF00005	ABC transporter
CH43_52	PF00483	Nucleotidyl transferase
CH43_52	PF01050	Mannose-6-phosphate isomerase
CH43_520	PF13407	Periplasmic binding protein domain
CH43_522	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_522	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_523	PF00419	Fimbrial protein
CH43_524	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_524	PF02753	Pili assembly chaperone PapD, C-terminal domain
CH43_525	PF00577	Outer membrane usher protein
CH43_525	PF13953	PapC C-terminal domain
CH43_526	PF00577	Outer membrane usher protein
CH43_526	PF13954	PapC N-terminal domain
CH43_527	PF00419	Fimbrial protein
CH43_528	PF01757	CH43_528
CH43_529	PF13518	Helix-turn-helix domain
CH43_53	PF01370	NAD dependent epimerase/dehydratase family
CH43_530	PF00665	Integrase core domain
CH43_530	PF13276	CH43_530
CH43_531	PF02219	Methylenetetrahydrofolate reductase
CH43_532	PF00696	Amino acid kinase family
CH43_532	PF00742	Homoserine dehydrogenase
CH43_532	PF03447	Homoserine dehydrogenase, NAD binding domain
CH43_533	PF01053	Cys/Met metabolism PLP-dependent enzyme
CH43_534	PF01340	Met Apo-repressor, MetJ
CH43_535	PF05360	CH43_535
CH43_536	PF01197	Ribosomal protein L31
CH43_537	PF00270	DEAD/DEAH box helicase
CH43_537	PF00271	Helicase conserved C-terminal domain
CH43_539	PF00356	Bacterial regulatory proteins, lacI family
CH43_539	PF13377	Periplasmic binding protein-like domain
CH43_54	PF16363	CH43_54
CH43_540	PF05036	Sporulation related domain
CH43_541	PF00227	Proteasome subunit
CH43_542	PF00004	ATPase family associated with various cellular activities (AAA)
CH43_542	PF07724	AAA domain (Cdc48 subfamily)
CH43_542	PF10431	C-terminal, D2-small domain, of ClpB protein
CH43_543	PF01040	UbiA prenyltransferase family
CH43_544	PF03737	Demethylmenaquinone methyltransferase
CH43_545	PF14016	CH43_545
CH43_547	PF13437	HlyD family secretion protein
CH43_548	PF00005	ABC transporter
CH43_548	PF00664	ABC transporter transmembrane region
CH43_548	PF03412	Peptidase C39 family
CH43_549	PF01797	Transposase IS200 like
CH43_55	PF16363	CH43_55
CH43_550	PF06005	Protein of unknown function (DUF904)
CH43_551	PF00230	Major intrinsic protein
CH43_552	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_552	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_553	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
CH43_554	PF00175	Oxidoreductase NAD-binding domain
CH43_554	PF00970	Oxidoreductase FAD-binding domain
CH43_555	PF05656	CH43_555
CH43_556	PF07305	CH43_556
CH43_557	PF00121	Triosephosphate isomerase
CH43_558	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_558	PF03466	LysR substrate binding domain
CH43_559	PF02585	GlcNAc-PI de-N-acetylase
CH43_56	PF00534	Glycosyl transferases group 1
CH43_56	PF13439	Glycosyltransferase Family 4
CH43_560	PF03737	Demethylmenaquinone methyltransferase
CH43_563	PF13531	Bacterial extracellular solute-binding protein
CH43_564	PF13531	Bacterial extracellular solute-binding protein
CH43_566	PF00365	Phosphofructokinase
CH43_567	PF01545	Cation efflux family
CH43_567	PF16916	CH43_567
CH43_568	PF04754	CH43_568
CH43_569	PF07813	LTXXQ motif family protein
CH43_570	PF00072	Response regulator receiver domain
CH43_570	PF00486	Transcriptional regulatory protein, C terminal
CH43_571	PF00512	His Kinase A (phospho-acceptor) domain
CH43_571	PF00672	HAMP domain
CH43_571	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_571	PF16527	CH43_571
CH43_572	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CH43_572	PF02805	Metal binding domain of Ada
CH43_572	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CH43_572	PF12833	Helix-turn-helix domain
CH43_573	PF00588	SpoU rRNA Methylase family
CH43_574	PF00132	Bacterial transferase hexapeptide (six repeats)
CH43_574	PF06426	Serine acetyltransferase, N-terminal
CH43_575	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CH43_575	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CH43_576	PF02556	Preprotein translocase subunit SecB
CH43_577	PF00462	Glutaredoxin
CH43_578	PF00581	Rhodanese-like domain
CH43_579	PF01676	Metalloenzyme superfamily
CH43_579	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
CH43_58	PF13692	Glycosyl transferases group 1
CH43_580	PF01551	Peptidase family M23
CH43_581	PF04748	Divergent polysaccharide deacetylase
CH43_582	PF04748	Divergent polysaccharide deacetylase
CH43_583	PF00107	Zinc-binding dehydrogenase
CH43_583	PF08240	Alcohol dehydrogenase GroES-like domain
CH43_584	PF00155	Aminotransferase class I and II
CH43_585	PF01370	NAD dependent epimerase/dehydratase family
CH43_586	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CH43_587	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CH43_588	PF00534	Glycosyl transferases group 1
CH43_588	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
CH43_589	PF00535	Glycosyl transferase family 2
CH43_590	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
CH43_590	PF06827	Zinc finger found in FPG and IleRS
CH43_590	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
CH43_591	PF01467	Cytidylyltransferase
CH43_592	PF00471	Ribosomal protein L33
CH43_593	PF00830	Ribosomal L28 family
CH43_594	PF04002	RadC-like JAB domain
CH43_595	PF02441	Flavoprotein
CH43_595	PF04127	DNA / pantothenate metabolism flavoprotein
CH43_596	PF00692	dUTPase
CH43_597	PF00440	Bacterial regulatory proteins, tetR family
CH43_598	PF00156	Phosphoribosyl transferase domain
CH43_599	PF01138	3' exoribonuclease family, domain 1
CH43_599	PF03725	3' exoribonuclease family, domain 2
CH43_6	PF00665	Integrase core domain
CH43_6	PF02796	Helix-turn-helix domain of resolvase
CH43_60	PF00535	Glycosyl transferase family 2
CH43_600	PF03755	CH43_600
CH43_600	PF08340	CH43_600
CH43_601	PF03458	CH43_601
CH43_602	PF01653	NAD-dependent DNA ligase adenylation domain
CH43_602	PF03120	NAD-dependent DNA ligase OB-fold domain
CH43_603	PF00625	Guanylate kinase
CH43_604	PF01192	RNA polymerase Rpb6
CH43_605	PF02824	TGS domain
CH43_605	PF04607	Region found in RelA / SpoT proteins
CH43_605	PF13291	ACT domain
CH43_605	PF13328	HD domain
CH43_606	PF00588	SpoU rRNA Methylase family
CH43_606	PF12105	SpoU, rRNA methylase, C-terminal
CH43_607	PF00270	DEAD/DEAH box helicase
CH43_607	PF00271	Helicase conserved C-terminal domain
CH43_607	PF17191	CH43_607
CH43_608	PF03616	CH43_608
CH43_609	PF00860	Permease family
CH43_611	PF00583	Acetyltransferase (GNAT) family
CH43_611	PF09500	Putative thioesterase (yiiD_Cterm)
CH43_612	PF00665	Integrase core domain
CH43_612	PF02796	Helix-turn-helix domain of resolvase
CH43_613	PF01695	IstB-like ATP binding protein
CH43_614	PF02580	D-Tyr-tRNA(Tyr) deacylase
CH43_615	PF03631	CH43_615
CH43_616	PF13419	Haloacid dehalogenase-like hydrolase
CH43_617	PF00009	Elongation factor Tu GTP binding domain
CH43_617	PF00679	Elongation factor G C-terminus
CH43_617	PF03144	Elongation factor Tu domain 2
CH43_618	PF00120	Glutamine synthetase, catalytic domain
CH43_618	PF03951	Glutamine synthetase, beta-Grasp domain
CH43_619	PF00512	His Kinase A (phospho-acceptor) domain
CH43_619	PF00989	PAS fold
CH43_619	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_62	PF13450	NAD(P)-binding Rossmann-like domain
CH43_620	PF00072	Response regulator receiver domain
CH43_620	PF00158	Sigma-54 interaction domain
CH43_620	PF02954	Bacterial regulatory protein, Fis family
CH43_621	PF04055	Radical SAM superfamily
CH43_621	PF06969	HemN C-terminal domain
CH43_622	PF04220	CH43_622
CH43_623	PF01926	50S ribosome-binding GTPase
CH43_624	PF00476	DNA polymerase family A
CH43_624	PF01367	5'-3' exonuclease, C-terminal SAM fold
CH43_624	PF01612	3'-5' exonuclease
CH43_624	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CH43_625	PF01323	DSBA-like thioredoxin domain
CH43_626	PF01636	Phosphotransferase enzyme family
CH43_627	PF06288	Protein of unknown function (DUF1040)
CH43_628	PF12804	MobA-like NTP transferase domain
CH43_629	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
CH43_63	PF01370	NAD dependent epimerase/dehydratase family
CH43_630	PF00872	CH43_630
CH43_635	PF00392	Bacterial regulatory proteins, gntR family
CH43_635	PF07729	FCD domain
CH43_637	PF07690	Major Facilitator Superfamily
CH43_64	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CH43_640	PF05025	RbsD / FucU transport protein family
CH43_641	PF02705	CH43_641
CH43_642	PF07728	AAA domain (dynein-related subfamily)
CH43_642	PF12592	Protein of unknown function (DUF3763)
CH43_643	PF05762	VWA domain containing CoxE-like protein
CH43_644	PF03590	Aspartate-ammonia ligase
CH43_645	PF01037	AsnC family
CH43_645	PF13412	Winged helix-turn-helix DNA-binding
CH43_646	PF00258	Flavodoxin
CH43_647	PF01134	Glucose inhibited division protein A
CH43_647	PF13932	GidA associated domain 3
CH43_648	PF02527	rRNA small subunit methyltransferase G
CH43_649	PF03899	CH43_649
CH43_65	PF16363	CH43_65
CH43_650	PF00119	ATP synthase A chain
CH43_651	PF00137	ATP synthase subunit C
CH43_652	PF00430	ATP synthase B/B' CF(0)
CH43_653	PF00213	ATP synthase delta (OSCP) subunit
CH43_654	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CH43_654	PF00306	ATP synthase alpha/beta chain, C terminal domain
CH43_654	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CH43_655	PF00231	ATP synthase
CH43_656	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CH43_656	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CH43_657	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
CH43_657	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CH43_658	PF00132	Bacterial transferase hexapeptide (six repeats)
CH43_658	PF12804	MobA-like NTP transferase domain
CH43_659	PF01380	SIS domain
CH43_659	PF13522	Glutamine amidotransferase domain
CH43_66	PF00483	Nucleotidyl transferase
CH43_660	PF12849	PBP superfamily domain
CH43_661	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_662	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_663	PF00005	ABC transporter
CH43_664	PF01895	PhoU domain
CH43_665	PF04519	CH43_665
CH43_666	PF00497	Bacterial extracellular solute-binding proteins, family 3
CH43_667	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_668	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_669	PF13419	Haloacid dehalogenase-like hydrolase
CH43_67	PF00111	2Fe-2S iron-sulfur cluster binding domain
CH43_67	PF00175	Oxidoreductase NAD-binding domain
CH43_67	PF00970	Oxidoreductase FAD-binding domain
CH43_670	PF00860	Permease family
CH43_673	PF07055	Enoyl reductase FAD binding domain
CH43_673	PF12241	Trans-2-enoyl-CoA reductase catalytic region
CH43_673	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
CH43_674	PF01926	50S ribosome-binding GTPase
CH43_674	PF10396	GTP-binding protein TrmE N-terminus
CH43_674	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
CH43_675	PF02096	60Kd inner membrane protein
CH43_675	PF14849	YidC periplasmic domain
CH43_676	PF01809	CH43_676
CH43_677	PF00825	Ribonuclease P
CH43_678	PF00468	Ribosomal protein L34
CH43_68	PF00762	Ferrochelatase
CH43_680	PF00308	Bacterial dnaA  protein
CH43_680	PF08299	Bacterial dnaA protein helix-turn-helix
CH43_680	PF11638	DnaA N-terminal domain
CH43_681	PF00712	DNA polymerase III beta subunit, N-terminal domain
CH43_681	PF02767	DNA polymerase III beta subunit, central domain
CH43_681	PF02768	DNA polymerase III beta subunit, C-terminal domain
CH43_682	PF02463	RecF/RecN/SMC N terminal domain
CH43_683	PF00204	DNA gyrase B
CH43_683	PF00986	DNA gyrase B subunit, carboxyl terminus
CH43_683	PF01751	Toprim domain
CH43_683	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_684	PF08282	haloacid dehalogenase-like hydrolase
CH43_685	PF00665	Integrase core domain
CH43_685	PF13276	CH43_685
CH43_686	PF13518	Helix-turn-helix domain
CH43_687	PF02423	Ornithine cyclodeaminase/mu-crystallin family
CH43_688	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_69	PF00406	Adenylate kinase
CH43_69	PF05191	Adenylate kinase, active site lid
CH43_690	PF07676	WD40-like Beta Propeller Repeat
CH43_691	PF07119	CH43_691
CH43_692	PF00011	Hsp20/alpha crystallin family
CH43_693	PF00011	Hsp20/alpha crystallin family
CH43_694	PF02080	TrkA-C domain
CH43_694	PF06826	CH43_694
CH43_695	PF00155	Aminotransferase class I and II
CH43_697	PF00128	Alpha amylase, catalytic domain
CH43_698	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CH43_698	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CH43_7	PF01695	IstB-like ATP binding protein
CH43_70	PF00183	Hsp90 protein
CH43_70	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_700	PF00691	OmpA family
CH43_700	PF13488	CH43_700
CH43_701	PF13673	Acetyltransferase (GNAT) domain
CH43_702	PF03352	Methyladenine glycosylase
CH43_704	PF02091	Glycyl-tRNA synthetase alpha subunit
CH43_705	PF02092	CH43_705
CH43_705	PF05746	DALR anticodon binding domain
CH43_706	PF11254	CH43_706
CH43_707	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CH43_707	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CH43_707	PF02378	Phosphotransferase system, EIIC
CH43_708	PF01232	Mannitol dehydrogenase Rossmann domain
CH43_708	PF08125	Mannitol dehydrogenase C-terminal domain
CH43_709	PF05068	Mannitol repressor
CH43_71	PF02132	RecR protein
CH43_71	PF13662	Toprim domain
CH43_711	PF10928	Protein of unknown function (DUF2810)
CH43_712	PF10517	CH43_712
CH43_715	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CH43_715	PF00672	HAMP domain
CH43_715	PF16591	CH43_715
CH43_716	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CH43_716	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CH43_717	PF02634	FdhD/NarQ family
CH43_718	PF00384	Molybdopterin oxidoreductase
CH43_718	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CH43_719	PF00384	Molybdopterin oxidoreductase
CH43_719	PF01568	Molydopterin dinucleotide binding domain
CH43_72	PF02575	YbaB/EbfC DNA-binding family
CH43_720	PF09163	Formate dehydrogenase N, transmembrane
CH43_720	PF13247	4Fe-4S dicluster domain
CH43_721	PF01292	Prokaryotic cytochrome b561
CH43_722	PF04216	Protein involved in formate dehydrogenase formation
CH43_723	PF03841	L-seryl-tRNA selenium transferase
CH43_723	PF12390	CH43_723
CH43_724	PF00009	Elongation factor Tu GTP binding domain
CH43_724	PF09106	Elongation factor SelB, winged helix
CH43_724	PF09107	Elongation factor SelB, winged helix
CH43_725	PF01526	CH43_725
CH43_726	PF00872	CH43_726
CH43_727	PF13988	CH43_727
CH43_73	PF12168	CH43_73
CH43_73	PF12169	DNA polymerase III subunits gamma and tau domain III
CH43_73	PF12170	DNA polymerase III tau subunit V interacting with alpha
CH43_73	PF13177	DNA polymerase III, delta subunit
CH43_730	PF07690	Major Facilitator Superfamily
CH43_731	PF00665	Integrase core domain
CH43_731	PF13276	CH43_731
CH43_732	PF13518	Helix-turn-helix domain
CH43_733	PF00455	CH43_733
CH43_733	PF08220	DeoR-like helix-turn-helix domain
CH43_734	PF01694	Rhomboid family
CH43_734	PF12122	Protein of unknown function (DUF3582)
CH43_735	PF00581	Rhodanese-like domain
CH43_736	PF00196	Bacterial regulatory proteins, luxR family
CH43_737	PF00343	Carbohydrate phosphorylase
CH43_738	PF02446	4-alpha-glucanotransferase
CH43_739	PF01106	NifU-like domain
CH43_739	PF01521	Iron-sulphur cluster biosynthesis
CH43_74	PF00156	Phosphoribosyl transferase domain
CH43_740	PF00156	Phosphoribosyl transferase domain
CH43_741	PF00561	alpha/beta hydrolase fold
CH43_742	PF07338	Protein of unknown function (DUF1471)
CH43_743	PF09012	FeoC like transcriptional regulator
CH43_744	PF02421	Ferrous iron transport protein B
CH43_744	PF07664	CH43_744
CH43_744	PF07670	Nucleoside recognition
CH43_745	PF04023	FeoA domain
CH43_746	PF00575	S1 RNA binding domain
CH43_746	PF09371	Tex-like protein N-terminal domain
CH43_746	PF12836	Helix-hairpin-helix motif
CH43_746	PF16921	CH43_746
CH43_747	PF01272	Transcription elongation factor, GreA/GreB, C-term
CH43_747	PF03449	Transcription elongation factor, N-terminal
CH43_748	PF00072	Response regulator receiver domain
CH43_748	PF00486	Transcriptional regulatory protein, C terminal
CH43_749	PF00512	His Kinase A (phospho-acceptor) domain
CH43_749	PF00672	HAMP domain
CH43_749	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_75	PF04304	CH43_75
CH43_750	PF01293	Phosphoenolpyruvate carboxykinase
CH43_751	PF01430	Hsp33 protein
CH43_752	PF01479	S4 domain
CH43_753	PF13419	Haloacid dehalogenase-like hydrolase
CH43_754	PF07095	Intracellular growth attenuator protein IgaA
CH43_756	PF00293	NUDIX domain
CH43_757	PF00905	Penicillin binding protein transpeptidase domain
CH43_757	PF00912	Transglycosylase
CH43_757	PF17092	CH43_757
CH43_758	PF11104	Type IV pilus assembly protein PilM;
CH43_759	PF05137	CH43_759
CH43_76	PF07445	Primosomal replication protein priB and priC
CH43_761	PF10748	CH43_761
CH43_762	PF00263	CH43_762
CH43_762	PF03958	Bacterial type II/III secretion system short domain
CH43_763	PF01202	Shikimate kinase
CH43_764	PF01761	3-dehydroquinate synthase
CH43_765	PF05036	Sporulation related domain
CH43_766	PF02086	D12 class N6 adenine-specific DNA methyltransferase
CH43_767	PF00834	Ribulose-phosphate 3 epimerase family
CH43_768	PF13419	Haloacid dehalogenase-like hydrolase
CH43_769	PF00579	tRNA synthetases class I (W and Y)
CH43_77	PF00924	Mechanosensitive ion channel
CH43_77	PF12794	CH43_77
CH43_77	PF12795	CH43_77
CH43_770	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CH43_770	PF10414	Sirohaem synthase dimerisation region
CH43_770	PF13241	Putative NAD(P)-binding
CH43_770	PF14824	Sirohaem biosynthesis protein central
CH43_771	PF01226	Formate/nitrite transporter
CH43_772	PF13806	Rieske-like [2Fe-2S] domain
CH43_773	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
CH43_773	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
CH43_773	PF04324	BFD-like [2Fe-2S] binding domain
CH43_773	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_774	PF07969	Amidohydrolase family
CH43_775	PF07690	Major Facilitator Superfamily
CH43_776	PF00593	TonB dependent receptor
CH43_776	PF07715	TonB-dependent Receptor Plug Domain
CH43_777	PF00356	Bacterial regulatory proteins, lacI family
CH43_777	PF13377	Periplasmic binding protein-like domain
CH43_778	PF02056	Family 4 glycosyl hydrolase
CH43_778	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CH43_779	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CH43_78	PF02635	DsrE/DsrF-like family
CH43_780	PF05872	CH43_780
CH43_781	PF00117	Glutamine amidotransferase class-I
CH43_782	PF00202	Aminotransferase class-III
CH43_783	PF12805	CH43_783
CH43_783	PF13515	CH43_783
CH43_784	PF00027	Cyclic nucleotide-binding domain
CH43_784	PF00325	Bacterial regulatory proteins, crp family
CH43_785	PF02566	OsmC-like protein
CH43_786	PF06836	CH43_786
CH43_787	PF00485	Phosphoribulokinase / Uridine kinase family
CH43_788	PF06794	Uncharacterised protein family (UPF0270)
CH43_789	PF00561	alpha/beta hydrolase fold
CH43_79	PF00440	Bacterial regulatory proteins, tetR family
CH43_79	PF08361	MAATS-type transcriptional repressor, C-terminal region
CH43_790	PF01810	CH43_790
CH43_791	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
CH43_792	PF00005	ABC transporter
CH43_793	PF00528	Binding-protein-dependent transport system inner membrane component
CH43_794	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
CH43_797	PF00535	Glycosyl transferase family 2
CH43_798	PF00005	ABC transporter
CH43_798	PF12848	ABC transporter
CH43_799	PF02525	Flavodoxin-like fold
CH43_80	PF00529	HlyD family secretion protein
CH43_80	PF16576	CH43_80
CH43_800	PF00999	Sodium/hydrogen exchanger family
CH43_800	PF02254	TrkA-N domain
CH43_801	PF09526	CH43_801
CH43_802	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CH43_803	PF04102	SlyX
CH43_804	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CH43_804	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
CH43_805	PF08348	CH43_805
CH43_805	PF13309	CH43_805
CH43_806	PF02635	DsrE/DsrF-like family
CH43_807	PF02635	DsrE/DsrF-like family
CH43_808	PF04077	DsrH like protein
CH43_809	PF00164	Ribosomal protein S12/S23
CH43_81	PF00873	AcrB/AcrD/AcrF family
CH43_810	PF00177	Ribosomal protein S7p/S5e
CH43_811	PF00009	Elongation factor Tu GTP binding domain
CH43_811	PF00679	Elongation factor G C-terminus
CH43_811	PF03144	Elongation factor Tu domain 2
CH43_811	PF03764	Elongation factor G, domain IV
CH43_811	PF14492	Elongation Factor G, domain II
CH43_812	PF00009	Elongation factor Tu GTP binding domain
CH43_812	PF03143	Elongation factor Tu C-terminal domain
CH43_812	PF03144	Elongation factor Tu domain 2
CH43_813	PF01797	Transposase IS200 like
CH43_814	PF04324	BFD-like [2Fe-2S] binding domain
CH43_815	PF00210	Ferritin-like domain
CH43_816	PF00338	Ribosomal protein S10p/S20e
CH43_817	PF00297	Ribosomal protein L3
CH43_818	PF00573	Ribosomal protein L4/L1 family
CH43_819	PF00276	Ribosomal protein L23
CH43_82	PF01197	Ribosomal protein L31
CH43_820	PF00181	Ribosomal Proteins L2, RNA binding domain
CH43_820	PF03947	Ribosomal Proteins L2, C-terminal domain
CH43_821	PF00203	Ribosomal protein S19
CH43_822	PF00237	Ribosomal protein L22p/L17e
CH43_823	PF00189	Ribosomal protein S3, C-terminal domain
CH43_823	PF07650	KH domain
CH43_824	PF00252	Ribosomal protein L16p/L10e
CH43_825	PF00831	Ribosomal L29 protein
CH43_826	PF00366	Ribosomal protein S17
CH43_827	PF00238	Ribosomal protein L14p/L23e
CH43_828	PF00467	KOW motif
CH43_828	PF17136	CH43_828
CH43_829	PF00281	Ribosomal protein L5
CH43_829	PF00673	ribosomal L5P family C-terminus
CH43_83	PF00444	Ribosomal protein L36
CH43_830	PF00253	Ribosomal protein S14p/S29e
CH43_831	PF00410	Ribosomal protein S8
CH43_832	PF00347	Ribosomal protein L6
CH43_833	PF00861	Ribosomal L18p/L5e family
CH43_834	PF00333	Ribosomal protein S5, N-terminal domain
CH43_834	PF03719	Ribosomal protein S5, C-terminal domain
CH43_835	PF00327	Ribosomal protein L30p/L7e
CH43_836	PF00828	Ribosomal protein L18e/L15
CH43_837	PF00344	SecY translocase
CH43_838	PF00444	Ribosomal protein L36
CH43_839	PF00416	Ribosomal protein S13/S18
CH43_840	PF00411	Ribosomal protein S11
CH43_841	PF00163	Ribosomal protein S4/S9 N-terminal domain
CH43_841	PF01479	S4 domain
CH43_842	PF01000	RNA polymerase Rpb3/RpoA insert domain
CH43_842	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CH43_842	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CH43_843	PF01196	Ribosomal protein L17
CH43_844	PF13411	MerR HTH family regulatory protein
CH43_845	PF03889	CH43_845
CH43_846	PF01741	Large-conductance mechanosensitive channel, MscL
CH43_847	PF02080	TrkA-C domain
CH43_847	PF02254	TrkA-N domain
CH43_848	PF01029	NusB family
CH43_848	PF01189	NOL1/NOP2/sun family
CH43_849	PF00551	Formyl transferase
CH43_849	PF02911	Formyl transferase, C-terminal domain
CH43_85	PF10757	CH43_85
CH43_850	PF01327	Polypeptide deformylase
CH43_851	PF02481	DNA recombination-mediator protein A
CH43_852	PF04361	CH43_852
CH43_853	PF01396	CH43_853
CH43_854	PF01300	Telomere recombination
CH43_855	PF01488	Shikimate / quinate 5-dehydrogenase
CH43_855	PF08501	Shikimate dehydrogenase substrate binding domain
CH43_856	PF00132	Bacterial transferase hexapeptide (six repeats)
CH43_86	PF05321	Haemolysin expression modulating protein
CH43_862	PF01527	Transposase
CH43_863	PF13276	CH43_863
CH43_863	PF13683	CH43_863
CH43_865	PF01695	IstB-like ATP binding protein
CH43_866	PF00665	Integrase core domain
CH43_866	PF02796	Helix-turn-helix domain of resolvase
CH43_867	PF12715	Abhydrolase family
CH43_868	PF00474	Sodium:solute symporter family
CH43_869	PF04341	CH43_869
CH43_87	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CH43_870	PF00501	AMP-binding enzyme
CH43_870	PF13193	AMP-binding enzyme C-terminal domain
CH43_870	PF16177	CH43_870
CH43_871	PF00375	Sodium:dicarboxylate symporter family
CH43_872	PF00072	Response regulator receiver domain
CH43_872	PF00196	Bacterial regulatory proteins, luxR family
CH43_873	PF00072	Response regulator receiver domain
CH43_873	PF00512	His Kinase A (phospho-acceptor) domain
CH43_873	PF01627	Hpt domain
CH43_873	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_874	PF00263	CH43_874
CH43_874	PF03958	Bacterial type II/III secretion system short domain
CH43_875	PF16693	CH43_875
CH43_876	PF08988	Protein of unknown function (DUF1895)
CH43_877	PF12833	Helix-turn-helix domain
CH43_878	PF09392	Type III secretion needle MxiH like
CH43_879	PF06287	CH43_879
CH43_88	PF09619	Type III secretion system lipoprotein chaperone (YscW)
CH43_881	PF01514	Secretory protein of YscJ/FliF family
CH43_882	PF13327	CH43_882
CH43_883	PF06188	CH43_883
CH43_884	PF00771	FHIPEP family
CH43_885	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CH43_885	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CH43_888	PF01052	Surface presentation of antigens (SPOA)
CH43_889	PF00813	CH43_889
CH43_89	PF13622	Thioesterase-like superfamily
CH43_890	PF01313	CH43_890
CH43_891	PF01311	CH43_891
CH43_892	PF01312	FlhB HrpN YscU SpaS Family
CH43_893	PF04143	CH43_893
CH43_894	PF01206	Sulfurtransferase TusA
CH43_895	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CH43_895	PF03466	LysR substrate binding domain
CH43_897	PF01053	Cys/Met metabolism PLP-dependent enzyme
CH43_898	PF00005	ABC transporter
CH43_899	PF01032	FecCD transport family
CH43_90	PF00909	Ammonium Transporter Family
CH43_900	PF01497	Periplasmic binding protein
CH43_901	PF05171	Haemin-degrading HemS
CH43_902	PF00593	TonB dependent receptor
CH43_902	PF07715	TonB-dependent Receptor Plug Domain
CH43_903	PF10636	Hemin uptake protein hemP
CH43_904	PF13460	NADH(P)-binding
CH43_905	PF06228	Haem utilisation ChuX/HutX
CH43_906	PF04055	Radical SAM superfamily
CH43_907	PF02219	Methylenetetrahydrofolate reductase
CH43_909	PF15617	CH43_909
CH43_91	PF00543	Nitrogen regulatory protein P-II
CH43_910	PF11202	CH43_910
CH43_910	PF15608	CH43_910
CH43_912	PF12500	CH43_912
CH43_912	PF15609	CH43_912
CH43_913	PF15632	CH43_913
CH43_914	PF02342	TerD domain
CH43_915	PF02342	TerD domain
CH43_916	PF05099	Tellurite resistance protein TerB
CH43_917	PF03741	CH43_917
CH43_918	PF02342	TerD domain
CH43_919	PF02342	TerD domain
CH43_92	PF00005	ABC transporter
CH43_92	PF00664	ABC transporter transmembrane region
CH43_920	PF06551	CH43_920
CH43_921	PF00577	Outer membrane usher protein
CH43_921	PF13953	PapC C-terminal domain
CH43_921	PF13954	PapC N-terminal domain
CH43_922	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
CH43_925	PF01565	FAD binding domain
CH43_925	PF08031	Berberine and berberine like
CH43_928	PF04345	Chorismate lyase
CH43_929	PF01040	UbiA prenyltransferase family
CH43_93	PF00005	ABC transporter
CH43_93	PF00664	ABC transporter transmembrane region
CH43_930	PF01553	Acyltransferase
CH43_931	PF01219	Prokaryotic diacylglycerol kinase
CH43_932	PF00717	Peptidase S24-like
CH43_932	PF01726	LexA DNA binding domain
CH43_933	PF01475	Ferric uptake regulator family
CH43_934	PF01207	Dihydrouridine synthase (Dus)
CH43_935	PF09583	CH43_935
CH43_936	PF00107	Zinc-binding dehydrogenase
CH43_936	PF08240	Alcohol dehydrogenase GroES-like domain
CH43_937	PF00772	DnaB-like helicase N terminal domain
CH43_937	PF03796	DnaB-like helicase C terminal domain
CH43_938	PF00842	Alanine racemase, C-terminal domain
CH43_938	PF01168	Alanine racemase, N-terminal domain
CH43_939	PF00155	Aminotransferase class I and II
CH43_94	PF01037	AsnC family
CH43_94	PF13412	Winged helix-turn-helix DNA-binding
CH43_940	PF04237	YjbR
CH43_941	PF00005	ABC transporter
CH43_942	PF00436	Single-strand binding protein family
CH43_943	PF05336	Domain of unknown function (DUF718)
CH43_944	PF00465	Iron-containing alcohol dehydrogenase
CH43_945	PF00596	Class II Aldolase and Adducin N-terminal domain
CH43_946	PF06134	L-rhamnose isomerase (RhaA)
CH43_947	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CH43_947	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CH43_95	PF00291	Pyridoxal-phosphate dependent enzyme
CH43_950	PF02311	AraC-like ligand binding domain
CH43_950	PF12833	Helix-turn-helix domain
CH43_951	PF02311	AraC-like ligand binding domain
CH43_951	PF12833	Helix-turn-helix domain
CH43_952	PF06379	CH43_952
CH43_955	PF03272	CH43_955
CH43_955	PF13402	Peptidase M60-like family
CH43_958	PF00440	Bacterial regulatory proteins, tetR family
CH43_959	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CH43_959	PF13247	4Fe-4S dicluster domain
CH43_959	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CH43_96	PF08282	haloacid dehalogenase-like hydrolase
CH43_960	PF12800	4Fe-4S binding domain
CH43_960	PF13187	4Fe-4S dicluster domain
CH43_961	PF00384	Molybdopterin oxidoreductase
CH43_961	PF01568	Molydopterin dinucleotide binding domain
CH43_961	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CH43_962	PF02683	CH43_962
CH43_962	PF11412	Disulphide bond corrector protein DsbC
CH43_962	PF13899	Thioredoxin-like
CH43_963	PF03091	CutA1 divalent ion tolerance protein
CH43_964	PF03605	CH43_964
CH43_965	PF00206	Lyase
CH43_965	PF10415	Fumarase C C-terminus
CH43_966	PF04186	CH43_966
CH43_967	PF00166	Chaperonin 10 Kd subunit
CH43_968	PF00118	TCP-1/cpn60 chaperonin family
CH43_969	PF13698	CH43_969
CH43_97	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CH43_97	PF12793	CH43_97
CH43_970	PF04055	Radical SAM superfamily
CH43_970	PF13353	4Fe-4S single cluster domain
CH43_971	PF01132	Elongation factor P (EF-P) OB domain
CH43_971	PF08207	Elongation factor P (EF-P) KOW-like domain
CH43_971	PF09285	Elongation factor P, C-terminal
CH43_972	PF00893	Small Multidrug Resistance protein
CH43_973	PF02313	Fumarate reductase subunit D
CH43_974	PF02300	Fumarate reductase subunit C
CH43_975	PF13085	2Fe-2S iron-sulfur cluster binding domain
CH43_975	PF13183	4Fe-4S dicluster domain
CH43_976	PF00890	FAD binding domain
CH43_976	PF02910	Fumarate reductase flavoprotein C-term
CH43_977	PF00152	tRNA synthetases class II (D, K and N)
CH43_978	PF00924	Mechanosensitive ion channel
CH43_978	PF12794	CH43_978
CH43_978	PF12795	CH43_978
CH43_979	PF02666	CH43_979
CH43_98	PF06508	Queuosine biosynthesis protein QueC
CH43_980	PF03193	Protein of unknown function, DUF258
CH43_981	PF00929	Exonuclease
CH43_984	PF08331	CH43_984
CH43_984	PF13484	CH43_984
CH43_985	PF01256	Carbohydrate kinase
CH43_985	PF03853	YjeF-related protein N-terminus
CH43_986	PF02367	Uncharacterised P-loop hydrolase UPF0079
CH43_987	PF01476	LysM domain
CH43_987	PF01520	N-acetylmuramoyl-L-alanine amidase
CH43_987	PF11741	AMIN domain
CH43_988	PF01119	DNA mismatch repair protein, C-terminal domain
CH43_988	PF08676	MutL C terminal dimerisation domain
CH43_988	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CH43_989	PF01715	IPP transferase
CH43_99	PF13279	Thioesterase-like superfamily
CH43_990	PF17209	CH43_990
CH43_991	PF01926	50S ribosome-binding GTPase
CH43_991	PF13167	CH43_991
CH43_991	PF16360	CH43_991
CH43_992	PF01145	SPFH domain / Band 7 family
CH43_992	PF12221	CH43_992
CH43_993	PF01145	SPFH domain / Band 7 family
CH43_994	PF09838	CH43_994
CH43_995	PF00709	Adenylosuccinate synthetase
CH43_996	PF02082	Transcriptional regulator
CH43_997	PF00575	S1 RNA binding domain
CH43_997	PF00773	RNB domain
CH43_997	PF08206	Ribonuclease B OB domain
CH43_997	PF08461	Ribonuclease R winged-helix domain
CH43_998	PF00588	SpoU rRNA Methylase family
CH43_998	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CH43_999	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CH43_999	PF02770	Acyl-CoA dehydrogenase, middle domain