locus-tag class description LDH64_00005 PF00308 Bacterial dnaA protein LDH64_00005 PF08299 Bacterial dnaA protein helix-turn-helix LDH64_00005 PF11638 DnaA N-terminal domain LDH64_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LDH64_00010 PF02767 DNA polymerase III beta subunit, central domain LDH64_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LDH64_00020 PF02463 RecF/RecN/SMC N terminal domain LDH64_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_00025 PF18053 DNA gyrase B subunit insert domain LDH64_00025 PF01751 Toprim domain LDH64_00025 PF00204 DNA gyrase B LDH64_00025 PF00986 DNA gyrase B subunit, carboxyl terminus LDH64_00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family LDH64_00045 PF13291 ACT domain LDH64_00045 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_00055 PF07119 Protein of unknown function (DUF1375) LDH64_00060 PF00011 Hsp20/alpha crystallin family LDH64_00065 PF00011 Hsp20/alpha crystallin family LDH64_00070 PF06826 Predicted Permease Membrane Region LDH64_00070 PF02080 TrkA-C domain LDH64_00075 PF00155 Aminotransferase class I and II LDH64_00085 PF00128 Alpha amylase, catalytic domain LDH64_00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDH64_00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDH64_00100 PF00691 OmpA family LDH64_00100 PF13488 Glycine zipper LDH64_00110 PF03352 Methyladenine glycosylase LDH64_00115 PF02091 Glycyl-tRNA synthetase alpha subunit LDH64_00120 PF05746 DALR anticodon binding domain LDH64_00120 PF02092 Glycyl-tRNA synthetase beta subunit LDH64_00125 PF11254 Protein of unknown function (DUF3053) LDH64_00130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDH64_00130 PF02378 Phosphotransferase system, EIIC LDH64_00130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDH64_00135 PF01232 Mannitol dehydrogenase Rossmann domain LDH64_00135 PF08125 Mannitol dehydrogenase C-terminal domain LDH64_00140 PF05068 Mannitol repressor LDH64_00145 PF10928 Protein of unknown function (DUF2810) LDH64_00160 PF02203 Tar ligand binding domain homologue LDH64_00160 PF00672 HAMP domain LDH64_00160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDH64_00165 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDH64_00165 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDH64_00170 PF02634 FdhD/NarQ family LDH64_00180 PF13247 4Fe-4S dicluster domain LDH64_00180 PF09163 Formate dehydrogenase N, transmembrane LDH64_00185 PF01292 Prokaryotic cytochrome b561 LDH64_00190 PF04216 Protein involved in formate dehydrogenase formation LDH64_00195 PF12390 Selenocysteine synthase N terminal LDH64_00195 PF03841 L-seryl-tRNA selenium transferase LDH64_00200 PF09107 Elongation factor SelB, winged helix LDH64_00200 PF09106 Elongation factor SelB, winged helix LDH64_00200 PF03144 Elongation factor Tu domain 2 LDH64_00200 PF00009 Elongation factor Tu GTP binding domain LDH64_00230 PF07690 Major Facilitator Superfamily LDH64_00245 PF01757 Acyltransferase family LDH64_00250 PF00419 Fimbrial protein LDH64_00260 PF13953 PapC C-terminal domain LDH64_00260 PF13954 PapC N-terminal domain LDH64_00260 PF00577 Outer membrane usher protein LDH64_00265 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_00265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_00275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_00275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_00285 PF13407 Periplasmic binding protein domain LDH64_00290 PF00005 ABC transporter LDH64_00295 PF02653 Branched-chain amino acid transport system / permease component LDH64_00300 PF12833 Helix-turn-helix domain LDH64_00310 PF13356 Arm DNA-binding domain LDH64_00310 PF14659 Phage integrase, N-terminal SAM-like domain LDH64_00310 PF00589 Phage integrase family LDH64_00320 PF04606 Ogr/Delta-like zinc finger LDH64_00355 PF00005 ABC transporter LDH64_00360 PF01032 FecCD transport family LDH64_00365 PF01032 FecCD transport family LDH64_00370 PF01497 Periplasmic binding protein LDH64_00385 PF00156 Phosphoribosyl transferase domain LDH64_00390 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_00395 PF01175 Urocanase Rossmann-like domain LDH64_00395 PF17392 Urocanase C-terminal domain LDH64_00395 PF17391 Urocanase N-terminal domain LDH64_00400 PF00221 Aromatic amino acid lyase LDH64_00405 PF00324 Amino acid permease LDH64_00410 PF12146 Serine aminopeptidase, S33 LDH64_00415 PF08019 Phosphoethanolamine transferase EptA/EptB LDH64_00415 PF00884 Sulfatase LDH64_00420 PF00072 Response regulator receiver domain LDH64_00420 PF00196 Bacterial regulatory proteins, luxR family LDH64_00430 PF00665 Integrase core domain LDH64_00430 PF02796 Helix-turn-helix domain of resolvase LDH64_00435 PF01695 IstB-like ATP binding protein LDH64_00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_00440 PF05231 MASE1 LDH64_00440 PF07730 Histidine kinase LDH64_00445 PF07690 Major Facilitator Superfamily LDH64_00455 PF04829 Pre-toxin domain with VENN motif LDH64_00455 PF05860 haemagglutination activity domain LDH64_00455 PF13332 Hemagglutinin repeat LDH64_00455 PF05594 Haemagluttinin repeat LDH64_00460 PF08479 POTRA domain, ShlB-type LDH64_00460 PF17287 POTRA domain LDH64_00460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDH64_00465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_00475 PF12911 N-terminal TM domain of oligopeptide transport permease C LDH64_00475 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_00480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_00480 PF00005 ABC transporter LDH64_00485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_00485 PF00005 ABC transporter LDH64_00495 PF00672 HAMP domain LDH64_00495 PF00563 EAL domain LDH64_00495 PF17154 Gammaproteobacterial periplasmic sensor domain LDH64_00495 PF00990 Diguanylate cyclase, GGDEF domain LDH64_00500 PF06178 Oligogalacturonate-specific porin protein (KdgM) LDH64_00505 PF06917 Periplasmic pectate lyase LDH64_00515 PF00375 Sodium:dicarboxylate symporter family LDH64_00520 PF00675 Insulinase (Peptidase family M16) LDH64_00520 PF05193 Peptidase M16 inactive domain LDH64_00525 PF00294 pfkB family carbohydrate kinase LDH64_00530 PF01361 Tautomerase enzyme LDH64_00535 PF00563 EAL domain LDH64_00540 PF05170 AsmA family LDH64_00545 PF02611 CDP-diacylglycerol pyrophosphatase LDH64_00550 PF03631 Virulence factor BrkB LDH64_00575 PF02595 Glycerate kinase family LDH64_00580 PF02447 GntP family permease LDH64_00590 PF17853 GGDEF-like domain LDH64_00590 PF05651 Putative sugar diacid recognition LDH64_00590 PF13556 PucR C-terminal helix-turn-helix domain LDH64_00595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDH64_00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_00600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LDH64_00605 PF01432 Peptidase family M3 LDH64_00610 PF04445 Putative SAM-dependent methyltransferase LDH64_00615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LDH64_00615 PF00413 Matrixin LDH64_00615 PF08548 Peptidase M10 serralysin C terminal LDH64_00620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LDH64_00620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LDH64_00625 PF00582 Universal stress protein family LDH64_00630 PF10625 Universal stress protein B (UspB) LDH64_00640 PF01384 Phosphate transporter family LDH64_00650 PF08448 PAS fold LDH64_00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_00650 PF00512 His Kinase A (phospho-acceptor) domain LDH64_00650 PF13188 PAS domain LDH64_00650 PF00072 Response regulator receiver domain LDH64_00655 PF00005 ABC transporter LDH64_00660 PF02653 Branched-chain amino acid transport system / permease component LDH64_00665 PF13407 Periplasmic binding protein domain LDH64_00675 PF01116 Fructose-bisphosphate aldolase class-II LDH64_00685 PF00072 Response regulator receiver domain LDH64_00685 PF00486 Transcriptional regulatory protein, C terminal LDH64_00695 PF02678 Pirin LDH64_00695 PF17954 Quercetinase C-terminal cupin domain LDH64_00700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDH64_00700 PF00356 Bacterial regulatory proteins, lacI family LDH64_00705 PF02447 GntP family permease LDH64_00710 PF01202 Shikimate kinase LDH64_00730 PF01914 MarC family integral membrane protein LDH64_00735 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDH64_00735 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDH64_00765 PF09134 Invasin, domain 3 LDH64_00765 PF02369 Bacterial Ig-like domain (group 1) LDH64_00765 PF11924 Inverse autotransporter, beta-domain LDH64_00765 PF07979 Intimin C-type lectin domain LDH64_00770 PF06580 Histidine kinase LDH64_00770 PF07694 5TMR of 5TMR-LYT LDH64_00775 PF00128 Alpha amylase, catalytic domain LDH64_00775 PF02806 Alpha amylase, C-terminal all-beta domain LDH64_00775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LDH64_00780 PF00128 Alpha amylase, catalytic domain LDH64_00780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LDH64_00780 PF18390 Glycogen debranching enzyme C-terminal domain LDH64_00785 PF00483 Nucleotidyl transferase LDH64_00790 PF08323 Starch synthase catalytic domain LDH64_00790 PF00534 Glycosyl transferases group 1 LDH64_00795 PF00343 Carbohydrate phosphorylase LDH64_00800 PF01266 FAD dependent oxidoreductase LDH64_00800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LDH64_00820 PF00455 DeoR C terminal sensor domain LDH64_00820 PF08220 DeoR-like helix-turn-helix domain LDH64_00825 PF01694 Rhomboid family LDH64_00825 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LDH64_00830 PF00581 Rhodanese-like domain LDH64_00835 PF00196 Bacterial regulatory proteins, luxR family LDH64_00835 PF17874 MalT-like TPR region LDH64_00845 PF02446 4-alpha-glucanotransferase LDH64_00850 PF01521 Iron-sulphur cluster biosynthesis LDH64_00850 PF01106 NifU-like domain LDH64_00855 PF00156 Phosphoribosyl transferase domain LDH64_00860 PF00561 alpha/beta hydrolase fold LDH64_00865 PF07338 Protein of unknown function (DUF1471) LDH64_00870 PF09012 FeoC like transcriptional regulator LDH64_00875 PF02421 Ferrous iron transport protein B LDH64_00875 PF07670 Nucleoside recognition LDH64_00875 PF07664 Ferrous iron transport protein B C terminus LDH64_00875 PF17910 FeoB cytosolic helical domain LDH64_00880 PF04023 FeoA domain LDH64_00885 PF17674 HHH domain LDH64_00885 PF00575 S1 RNA binding domain LDH64_00885 PF09371 Tex-like protein N-terminal domain LDH64_00885 PF16921 Tex protein YqgF-like domain LDH64_00890 PF01272 Transcription elongation factor, GreA/GreB, C-term LDH64_00890 PF03449 Transcription elongation factor, N-terminal LDH64_00895 PF00072 Response regulator receiver domain LDH64_00895 PF00486 Transcriptional regulatory protein, C terminal LDH64_00900 PF00672 HAMP domain LDH64_00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_00900 PF00512 His Kinase A (phospho-acceptor) domain LDH64_00905 PF01293 Phosphoenolpyruvate carboxykinase LDH64_00910 PF01430 Hsp33 protein LDH64_00915 PF01479 S4 domain LDH64_00920 PF13419 Haloacid dehalogenase-like hydrolase LDH64_00925 PF07095 Intracellular growth attenuator protein IgaA LDH64_00930 PF00293 NUDIX domain LDH64_00935 PF00912 Transglycosylase LDH64_00935 PF17092 Penicillin-binding protein OB-like domain LDH64_00935 PF00905 Penicillin binding protein transpeptidase domain LDH64_00965 PF00263 Bacterial type II and III secretion system protein LDH64_00965 PF03958 Bacterial type II/III secretion system short domain LDH64_00970 PF01202 Shikimate kinase LDH64_00975 PF01761 3-dehydroquinate synthase LDH64_00980 PF05036 Sporulation related domain LDH64_00985 PF02086 D12 class N6 adenine-specific DNA methyltransferase LDH64_00990 PF00834 Ribulose-phosphate 3 epimerase family LDH64_00995 PF13419 Haloacid dehalogenase-like hydrolase LDH64_01000 PF00579 tRNA synthetases class I (W and Y) LDH64_01005 PF10414 Sirohaem synthase dimerisation region LDH64_01005 PF14824 Sirohaem biosynthesis protein central LDH64_01005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDH64_01010 PF01226 Formate/nitrite transporter LDH64_01015 PF13806 Rieske-like [2Fe-2S] domain LDH64_01020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDH64_01020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDH64_01020 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_01020 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDH64_01020 PF04324 BFD-like [2Fe-2S] binding domain LDH64_01025 PF07969 Amidohydrolase family LDH64_01030 PF07690 Major Facilitator Superfamily LDH64_01040 PF00356 Bacterial regulatory proteins, lacI family LDH64_01045 PF02056 Family 4 glycosyl hydrolase LDH64_01045 PF11975 Family 4 glycosyl hydrolase C-terminal domain LDH64_01050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDH64_01055 PF05872 Bacterial protein of unknown function (DUF853) LDH64_01060 PF00117 Glutamine amidotransferase class-I LDH64_01065 PF00202 Aminotransferase class-III LDH64_01070 PF12805 FUSC-like inner membrane protein yccS LDH64_01075 PF13545 Crp-like helix-turn-helix domain LDH64_01075 PF00027 Cyclic nucleotide-binding domain LDH64_01080 PF02566 OsmC-like protein LDH64_01090 PF00485 Phosphoribulokinase / Uridine kinase family LDH64_01095 PF06794 Uncharacterised protein family (UPF0270) LDH64_01100 PF00561 alpha/beta hydrolase fold LDH64_01105 PF01810 LysE type translocator LDH64_01110 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDH64_01115 PF00005 ABC transporter LDH64_01120 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_01125 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LDH64_01135 PF00535 Glycosyl transferase family 2 LDH64_01145 PF02525 Flavodoxin-like fold LDH64_01150 PF02254 TrkA-N domain LDH64_01150 PF00999 Sodium/hydrogen exchanger family LDH64_01155 PF09526 Probable metal-binding protein (DUF2387) LDH64_01160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDH64_01165 PF04102 SlyX LDH64_01170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDH64_01170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDH64_01175 PF08348 YheO-like PAS domain LDH64_01175 PF13309 HTH domain LDH64_01180 PF02635 DsrE/DsrF-like family LDH64_01185 PF02635 DsrE/DsrF-like family LDH64_01190 PF04077 DsrH like protein LDH64_01195 PF00164 Ribosomal protein S12/S23 LDH64_01200 PF00177 Ribosomal protein S7p/S5e LDH64_01205 PF03144 Elongation factor Tu domain 2 LDH64_01205 PF03764 Elongation factor G, domain IV LDH64_01205 PF00009 Elongation factor Tu GTP binding domain LDH64_01205 PF00679 Elongation factor G C-terminus LDH64_01205 PF14492 Elongation Factor G, domain II LDH64_01210 PF00009 Elongation factor Tu GTP binding domain LDH64_01210 PF03144 Elongation factor Tu domain 2 LDH64_01210 PF03143 Elongation factor Tu C-terminal domain LDH64_01215 PF01797 Transposase IS200 like LDH64_01220 PF04324 BFD-like [2Fe-2S] binding domain LDH64_01225 PF00210 Ferritin-like domain LDH64_01230 PF00338 Ribosomal protein S10p/S20e LDH64_01235 PF00297 Ribosomal protein L3 LDH64_01240 PF00573 Ribosomal protein L4/L1 family LDH64_01245 PF00276 Ribosomal protein L23 LDH64_01250 PF03947 Ribosomal Proteins L2, C-terminal domain LDH64_01250 PF00181 Ribosomal Proteins L2, RNA binding domain LDH64_01255 PF00203 Ribosomal protein S19 LDH64_01260 PF00237 Ribosomal protein L22p/L17e LDH64_01265 PF00189 Ribosomal protein S3, C-terminal domain LDH64_01265 PF07650 KH domain LDH64_01270 PF00252 Ribosomal protein L16p/L10e LDH64_01275 PF00831 Ribosomal L29 protein LDH64_01280 PF00366 Ribosomal protein S17 LDH64_01285 PF00238 Ribosomal protein L14p/L23e LDH64_01290 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LDH64_01290 PF00467 KOW motif LDH64_01295 PF00281 Ribosomal protein L5 LDH64_01295 PF00673 ribosomal L5P family C-terminus LDH64_01300 PF00253 Ribosomal protein S14p/S29e LDH64_01305 PF00410 Ribosomal protein S8 LDH64_01310 PF00347 Ribosomal protein L6 LDH64_01315 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LDH64_01320 PF03719 Ribosomal protein S5, C-terminal domain LDH64_01320 PF00333 Ribosomal protein S5, N-terminal domain LDH64_01325 PF00327 Ribosomal protein L30p/L7e LDH64_01330 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LDH64_01335 PF00344 SecY translocase LDH64_01340 PF00444 Ribosomal protein L36 LDH64_01345 PF00416 Ribosomal protein S13/S18 LDH64_01350 PF00411 Ribosomal protein S11 LDH64_01355 PF00163 Ribosomal protein S4/S9 N-terminal domain LDH64_01355 PF01479 S4 domain LDH64_01360 PF01000 RNA polymerase Rpb3/RpoA insert domain LDH64_01360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LDH64_01360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LDH64_01365 PF01196 Ribosomal protein L17 LDH64_01370 PF13411 MerR HTH family regulatory protein LDH64_01375 PF03889 Alternative ribosome-rescue factor A LDH64_01380 PF01741 Large-conductance mechanosensitive channel, MscL LDH64_01385 PF02080 TrkA-C domain LDH64_01385 PF02254 TrkA-N domain LDH64_01390 PF01189 16S rRNA methyltransferase RsmB/F LDH64_01390 PF01029 NusB family LDH64_01395 PF02911 Formyl transferase, C-terminal domain LDH64_01395 PF00551 Formyl transferase LDH64_01400 PF01327 Polypeptide deformylase LDH64_01405 PF17782 DprA winged helix domain LDH64_01405 PF02481 DNA recombination-mediator protein A LDH64_01410 PF04361 Protein of unknown function (DUF494) LDH64_01415 PF01396 Topoisomerase DNA binding C4 zinc finger LDH64_01420 PF01300 Telomere recombination LDH64_01425 PF08501 Shikimate dehydrogenase substrate binding domain LDH64_01425 PF01488 Shikimate / quinate 5-dehydrogenase LDH64_01425 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LDH64_01430 PF00132 Bacterial transferase hexapeptide (six repeats) LDH64_01435 PF01695 IstB-like ATP binding protein LDH64_01440 PF02796 Helix-turn-helix domain of resolvase LDH64_01440 PF00665 Integrase core domain LDH64_01475 PF04204 Homoserine O-succinyltransferase LDH64_01480 PF01274 Malate synthase LDH64_01485 PF00463 Isocitrate lyase family LDH64_01490 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LDH64_01500 PF02310 B12 binding domain LDH64_01500 PF02574 Homocysteine S-methyltransferase LDH64_01500 PF02965 Vitamin B12 dependent methionine synthase, activation domain LDH64_01500 PF00809 Pterin binding enzyme LDH64_01500 PF02607 B12 binding domain LDH64_01505 PF13332 Hemagglutinin repeat LDH64_01505 PF05860 haemagglutination activity domain LDH64_01510 PF08479 POTRA domain, ShlB-type LDH64_01510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDH64_01510 PF17287 POTRA domain LDH64_01515 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDH64_01515 PF17287 POTRA domain LDH64_01515 PF08479 POTRA domain, ShlB-type LDH64_01520 PF01842 ACT domain LDH64_01520 PF00696 Amino acid kinase family LDH64_01525 PF00342 Phosphoglucose isomerase LDH64_01530 PF06146 Phosphate-starvation-inducible E LDH64_01535 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_01540 PF14785 Maltose transport system permease protein MalF P2 domain LDH64_01540 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_01545 PF01547 Bacterial extracellular solute-binding protein LDH64_01555 PF17912 MalK OB fold domain LDH64_01555 PF00005 ABC transporter LDH64_01560 PF02264 LamB porin LDH64_01565 PF07148 Maltose operon periplasmic protein precursor (MalM) LDH64_01575 PF05638 Type VI secretion system effector, Hcp LDH64_01585 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LDH64_01595 PF05947 Type VI secretion system, TssF LDH64_01605 PF00311 Phosphoenolpyruvate carboxylase LDH64_01610 PF07687 Peptidase dimerisation domain LDH64_01610 PF01546 Peptidase family M20/M25/M40 LDH64_01615 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDH64_01615 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDH64_01620 PF00696 Amino acid kinase family LDH64_01625 PF14698 Argininosuccinate lyase C-terminal LDH64_01625 PF00206 Lyase LDH64_01630 PF07715 TonB-dependent Receptor Plug Domain LDH64_01630 PF00593 TonB dependent receptor LDH64_01640 PF00005 ABC transporter LDH64_01640 PF00664 ABC transporter transmembrane region LDH64_01645 PF00529 HlyD membrane-fusion protein of T1SS LDH64_01650 PF03544 Gram-negative bacterial TonB protein C-terminal LDH64_01655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDH64_01655 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_01660 PF00462 Glutaredoxin LDH64_01660 PF08534 Redoxin LDH64_01665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_01665 PF03466 LysR substrate binding domain LDH64_01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_01670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDH64_01675 PF00440 Bacterial regulatory proteins, tetR family LDH64_01680 PF07226 Protein of unknown function (DUF1422) LDH64_01685 PF05958 tRNA (Uracil-5-)-methyltransferase LDH64_01690 PF07715 TonB-dependent Receptor Plug Domain LDH64_01690 PF00593 TonB dependent receptor LDH64_01695 PF01177 Asp/Glu/Hydantoin racemase LDH64_01730 PF13407 Periplasmic binding protein domain LDH64_01735 PF00005 ABC transporter LDH64_01740 PF02653 Branched-chain amino acid transport system / permease component LDH64_01745 PF02653 Branched-chain amino acid transport system / permease component LDH64_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_01750 PF03466 LysR substrate binding domain LDH64_01755 PF04219 Protein of unknown function, DUF LDH64_01760 PF01078 Magnesium chelatase, subunit ChlI LDH64_01760 PF13335 Magnesium chelatase, subunit ChlI C-terminal LDH64_01765 PF08046 IlvGEDA operon leader peptide LDH64_01770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDH64_01770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDH64_01770 PF00205 Thiamine pyrophosphate enzyme, central domain LDH64_01780 PF01063 Amino-transferase class IV LDH64_01785 PF00920 Dehydratase family LDH64_01790 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_01790 PF00585 C-terminal regulatory domain of Threonine dehydratase LDH64_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_01820 PF03466 LysR substrate binding domain LDH64_01825 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LDH64_01825 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LDH64_01850 PF01320 Colicin immunity protein / pyocin immunity protein LDH64_01855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_01855 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_01865 PF13954 PapC N-terminal domain LDH64_01865 PF00577 Outer membrane usher protein LDH64_01865 PF13953 PapC C-terminal domain LDH64_01870 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_01870 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_01880 PF00872 Transposase, Mutator family LDH64_01900 PF00580 UvrD/REP helicase N-terminal domain LDH64_01900 PF13361 UvrD-like helicase C-terminal domain LDH64_01910 PF00271 Helicase conserved C-terminal domain LDH64_01910 PF00270 DEAD/DEAH box helicase LDH64_01915 PF00085 Thioredoxin LDH64_01920 PF07497 Rho termination factor, RNA-binding domain LDH64_01920 PF07498 Rho termination factor, N-terminal domain LDH64_01920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDH64_01925 PF00953 Glycosyl transferase family 4 LDH64_01930 PF02706 Chain length determinant protein LDH64_01935 PF02350 UDP-N-acetylglucosamine 2-epimerase LDH64_01940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDH64_01940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDH64_01940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDH64_01945 PF16363 GDP-mannose 4,6 dehydratase LDH64_01950 PF00483 Nucleotidyl transferase LDH64_01960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDH64_01965 PF01943 Polysaccharide biosynthesis protein LDH64_01970 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LDH64_01975 PF06899 WzyE protein, O-antigen assembly polymerase LDH64_01980 PF03808 Glycosyl transferase WecB/TagA/CpsF family LDH64_01985 PF00324 Amino acid permease LDH64_02015 PF07719 Tetratricopeptide repeat LDH64_02015 PF07219 HemY protein N-terminus LDH64_02020 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LDH64_02025 PF02602 Uroporphyrinogen-III synthase HemD LDH64_02030 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LDH64_02030 PF03900 Porphobilinogen deaminase, C-terminal domain LDH64_02040 PF12633 Adenylate cyclase NT domain LDH64_02040 PF01295 Adenylate cyclase, class-I LDH64_02045 PF01491 Frataxin-like domain LDH64_02050 PF13627 Prokaryotic lipoprotein-attachment site LDH64_02055 PF01678 Diaminopimelate epimerase LDH64_02060 PF04340 Protein of unknown function, DUF484 LDH64_02065 PF02899 Phage integrase, N-terminal SAM-like domain LDH64_02065 PF00589 Phage integrase family LDH64_02070 PF13419 Haloacid dehalogenase-like hydrolase LDH64_02075 PF13361 UvrD-like helicase C-terminal domain LDH64_02075 PF00580 UvrD/REP helicase N-terminal domain LDH64_02090 PF09370 Phosphoenolpyruvate hydrolase-like LDH64_02095 PF01544 CorA-like Mg2+ transporter protein LDH64_02100 PF00892 EamA-like transporter family LDH64_02105 PF03061 Thioesterase superfamily LDH64_02110 PF02253 Phospholipase A1 LDH64_02115 PF00270 DEAD/DEAH box helicase LDH64_02115 PF00271 Helicase conserved C-terminal domain LDH64_02115 PF00570 HRDC domain LDH64_02115 PF16124 RecQ zinc-binding LDH64_02115 PF09382 RQC domain LDH64_02120 PF01810 LysE type translocator LDH64_02125 PF01810 LysE type translocator LDH64_02130 PF12146 Serine aminopeptidase, S33 LDH64_02145 PF03009 Glycerophosphoryl diester phosphodiesterase family LDH64_02180 PF01206 Sulfurtransferase TusA LDH64_02185 PF00403 Heavy-metal-associated domain LDH64_02190 PF07947 YhhN family LDH64_02205 PF06611 Protein of unknown function (DUF1145) LDH64_02215 PF02881 SRP54-type protein, helical bundle domain LDH64_02215 PF00448 SRP54-type protein, GTPase domain LDH64_02215 PF02881 SRP54-type protein, helical bundle domain LDH64_02215 PF00448 SRP54-type protein, GTPase domain LDH64_02220 PF00005 ABC transporter LDH64_02225 PF18075 FtsX extracellular domain LDH64_02225 PF02687 FtsX-like permease family LDH64_02230 PF04545 Sigma-70, region 4 LDH64_02230 PF04542 Sigma-70 region 2 LDH64_02230 PF00140 Sigma-70 factor, region 1.2 LDH64_02235 PF01797 Transposase IS200 like LDH64_02240 PF12568 Acetyltransferase (GNAT) domain, PanZ LDH64_02245 PF13458 Periplasmic binding protein LDH64_02250 PF02653 Branched-chain amino acid transport system / permease component LDH64_02255 PF02653 Branched-chain amino acid transport system / permease component LDH64_02255 PF11862 Domain of unknown function (DUF3382) LDH64_02260 PF00005 ABC transporter LDH64_02260 PF12399 Branched-chain amino acid ATP-binding cassette transporter LDH64_02265 PF00005 ABC transporter LDH64_02305 PF13416 Bacterial extracellular solute-binding protein LDH64_02310 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_02315 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_02320 PF00005 ABC transporter LDH64_02320 PF17912 MalK OB fold domain LDH64_02325 PF03009 Glycerophosphoryl diester phosphodiesterase family LDH64_02330 PF03547 Membrane transport protein LDH64_02335 PF00892 EamA-like transporter family LDH64_02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_02340 PF03466 LysR substrate binding domain LDH64_02345 PF01717 Cobalamin-independent synthase, Catalytic domain LDH64_02345 PF08267 Cobalamin-independent synthase, N-terminal domain LDH64_02350 PF01738 Dienelactone hydrolase family LDH64_02355 PF01048 Phosphorylase superfamily LDH64_02365 PF13722 5TM C-terminal transporter carbon starvation CstA LDH64_02365 PF02554 Carbon starvation protein CstA LDH64_02370 PF09335 SNARE associated Golgi protein LDH64_02375 PF02646 RmuC family LDH64_02380 PF01209 ubiE/COQ5 methyltransferase family LDH64_02385 PF02036 SCP-2 sterol transfer family LDH64_02390 PF03109 ABC1 family LDH64_02395 PF02416 mttA/Hcf106 family LDH64_02405 PF00902 Sec-independent protein translocase protein (TatC) LDH64_02415 PF02796 Helix-turn-helix domain of resolvase LDH64_02415 PF00665 Integrase core domain LDH64_02420 PF01695 IstB-like ATP binding protein LDH64_02425 PF01026 TatD related DNase LDH64_02430 PF00490 Delta-aminolevulinic acid dehydratase LDH64_02435 PF02357 Transcription termination factor nusG LDH64_02440 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LDH64_02445 PF00175 Oxidoreductase NAD-binding domain LDH64_02445 PF00970 Oxidoreductase FAD-binding domain LDH64_02450 PF00108 Thiolase, N-terminal domain LDH64_02450 PF02803 Thiolase, C-terminal domain LDH64_02455 PF00378 Enoyl-CoA hydratase/isomerase LDH64_02455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDH64_02455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDH64_02460 PF00557 Metallopeptidase family M24 LDH64_02465 PF01205 Uncharacterized protein family UPF0029 LDH64_02465 PF09186 Domain of unknown function (DUF1949) LDH64_02480 PF02386 Cation transport protein LDH64_02485 PF12724 Flavodoxin domain LDH64_02515 PF10043 Predicted periplasmic lipoprotein (DUF2279) LDH64_02520 PF13091 PLD-like domain LDH64_02525 PF13380 CoA binding domain LDH64_02525 PF00583 Acetyltransferase (GNAT) family LDH64_02525 PF13607 Succinyl-CoA ligase like flavodoxin domain LDH64_02530 PF03942 DTW domain LDH64_02535 PF00085 Thioredoxin LDH64_02540 PF00588 SpoU rRNA Methylase family LDH64_02540 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDH64_02545 PF07690 Major Facilitator Superfamily LDH64_02550 PF00529 HlyD membrane-fusion protein of T1SS LDH64_02550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_02555 PF01047 MarR family LDH64_02560 PF05437 Branched-chain amino acid transport protein (AzlD) LDH64_02565 PF03591 AzlC protein LDH64_02570 PF07690 Major Facilitator Superfamily LDH64_02580 PF01425 Amidase LDH64_02595 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_02600 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_02605 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_02610 PF00005 ABC transporter LDH64_02620 PF01695 IstB-like ATP binding protein LDH64_02625 PF00665 Integrase core domain LDH64_02625 PF02796 Helix-turn-helix domain of resolvase LDH64_02635 PF01546 Peptidase family M20/M25/M40 LDH64_02635 PF07687 Peptidase dimerisation domain LDH64_02645 PF08479 POTRA domain, ShlB-type LDH64_02645 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDH64_02650 PF05860 haemagglutination activity domain LDH64_02655 PF18254 HMW1 domain 2 LDH64_02655 PF18071 HMW1C N-terminal LDH64_02665 PF09317 Domain of unknown function (DUF1974) LDH64_02665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDH64_02665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDH64_02670 PF13580 SIS domain LDH64_02675 PF13230 Glutamine amidotransferases class-II LDH64_02680 PF03734 L,D-transpeptidase catalytic domain LDH64_02690 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LDH64_02690 PF11973 NQRA C-terminal domain LDH64_02695 PF03116 NQR2, RnfD, RnfE family LDH64_02700 PF04205 FMN-binding domain LDH64_02705 PF02508 Rnf-Nqr subunit, membrane protein LDH64_02710 PF02508 Rnf-Nqr subunit, membrane protein LDH64_02715 PF00111 2Fe-2S iron-sulfur cluster binding domain LDH64_02715 PF00175 Oxidoreductase NAD-binding domain LDH64_02715 PF00970 Oxidoreductase FAD-binding domain LDH64_02720 PF02424 ApbE family LDH64_02730 PF03009 Glycerophosphoryl diester phosphodiesterase family LDH64_02735 PF00817 impB/mucB/samB family LDH64_02735 PF11799 impB/mucB/samB family C-terminal domain LDH64_02735 PF11798 IMS family HHH motif LDH64_02740 PF07687 Peptidase dimerisation domain LDH64_02740 PF01546 Peptidase family M20/M25/M40 LDH64_02745 PF03466 LysR substrate binding domain LDH64_02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_02760 PF00156 Phosphoribosyl transferase domain LDH64_02765 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LDH64_02770 PF07417 Sigma factor-binding transcriptional regulator Crl LDH64_02775 PF00696 Amino acid kinase family LDH64_02775 PF01472 PUA domain LDH64_02780 PF00171 Aldehyde dehydrogenase family LDH64_02785 PF07238 PilZ domain LDH64_02785 PF07317 Flagellar regulator YcgR LDH64_02805 PF01202 Shikimate kinase LDH64_02810 PF06865 Pyrimidine/purine nucleoside phosphorylase LDH64_02815 PF04381 Putative exonuclease, RdgC LDH64_02820 PF00480 ROK family LDH64_02825 PF13476 AAA domain LDH64_02830 PF00149 Calcineurin-like phosphoesterase LDH64_02830 PF12320 Type 5 capsule protein repressor C-terminal domain LDH64_02835 PF00072 Response regulator receiver domain LDH64_02835 PF00486 Transcriptional regulatory protein, C terminal LDH64_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_02840 PF00512 His Kinase A (phospho-acceptor) domain LDH64_02840 PF00989 PAS fold LDH64_02840 PF11808 Phosphate regulon sensor protein PhoR LDH64_02845 PF12849 PBP superfamily domain LDH64_02850 PF05525 Branched-chain amino acid transport protein LDH64_02855 PF00324 Amino acid permease LDH64_02860 PF02903 Alpha amylase, N-terminal ig-like domain LDH64_02860 PF00128 Alpha amylase, catalytic domain LDH64_02880 PF00578 AhpC/TSA family LDH64_02880 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDH64_02885 PF04336 Acyl carrier protein phosphodiesterase LDH64_02890 PF02547 Queuosine biosynthesis protein LDH64_02895 PF01702 Queuine tRNA-ribosyltransferase LDH64_02900 PF02699 Preprotein translocase subunit LDH64_02905 PF07549 SecD/SecF GG Motif LDH64_02905 PF13721 SecD export protein N-terminal TM region LDH64_02905 PF02355 Protein export membrane protein LDH64_02910 PF07549 SecD/SecF GG Motif LDH64_02910 PF02355 Protein export membrane protein LDH64_02920 PF01797 Transposase IS200 like LDH64_02935 PF03477 ATP cone domain LDH64_02940 PF01872 RibD C-terminal domain LDH64_02940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDH64_02945 PF00885 6,7-dimethyl-8-ribityllumazine synthase LDH64_02950 PF01029 NusB family LDH64_02955 PF02769 AIR synthase related protein, C-terminal domain LDH64_02955 PF00586 AIR synthase related protein, N-terminal domain LDH64_02960 PF04608 Phosphatidylglycerophosphatase A LDH64_02970 PF02780 Transketolase, C-terminal domain LDH64_02970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDH64_02970 PF02779 Transketolase, pyrimidine binding domain LDH64_02975 PF00348 Polyprenyl synthetase LDH64_02980 PF02609 Exonuclease VII small subunit LDH64_02985 PF02568 Thiamine biosynthesis protein (ThiI) LDH64_02985 PF02926 THUMP domain LDH64_02990 PF01965 DJ-1/PfpI family LDH64_02995 PF02558 Ketopantoate reductase PanE/ApbA LDH64_02995 PF08546 Ketopantoate reductase PanE/ApbA C terminal LDH64_03000 PF04461 Protein of unknown function (DUF520) LDH64_03005 PF07690 Major Facilitator Superfamily LDH64_03010 PF01040 UbiA prenyltransferase family LDH64_03015 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LDH64_03020 PF00510 Cytochrome c oxidase subunit III LDH64_03025 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDH64_03030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LDH64_03030 PF06481 COX Aromatic Rich Motif LDH64_03035 PF03502 Nucleoside-specific channel-forming protein, Tsx LDH64_03040 PF07690 Major Facilitator Superfamily LDH64_03045 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LDH64_03045 PF03923 Uncharacterized lipoprotein LDH64_03050 PF01722 BolA-like protein LDH64_03055 PF05697 Bacterial trigger factor protein (TF) LDH64_03055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDH64_03055 PF05698 Bacterial trigger factor protein (TF) C-terminus LDH64_03060 PF00574 Clp protease LDH64_03065 PF07724 AAA domain (Cdc48 subfamily) LDH64_03065 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_03065 PF06689 ClpX C4-type zinc finger LDH64_03070 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_03070 PF05362 Lon protease (S16) C-terminal proteolytic domain LDH64_03070 PF02190 ATP-dependent protease La (LON) substrate-binding domain LDH64_03075 PF00216 Bacterial DNA-binding protein LDH64_03080 PF13145 PPIC-type PPIASE domain LDH64_03095 PF06508 Queuosine biosynthesis protein QueC LDH64_03100 PF12793 Sugar transport-related sRNA regulator N-term LDH64_03100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_03110 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_03115 PF13404 AsnC-type helix-turn-helix domain LDH64_03115 PF01037 Lrp/AsnC ligand binding domain LDH64_03120 PF00664 ABC transporter transmembrane region LDH64_03120 PF00005 ABC transporter LDH64_03125 PF00664 ABC transporter transmembrane region LDH64_03125 PF00005 ABC transporter LDH64_03130 PF00543 Nitrogen regulatory protein P-II LDH64_03135 PF00909 Ammonium Transporter Family LDH64_03145 PF09619 Type III secretion system lipoprotein chaperone (YscW) LDH64_03150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDH64_03160 PF05321 Haemolysin expression modulating protein LDH64_03165 PF10757 Biofilm formation regulator YbaJ LDH64_03175 PF00444 Ribosomal protein L36 LDH64_03180 PF01197 Ribosomal protein L31 LDH64_03185 PF00873 AcrB/AcrD/AcrF family LDH64_03190 PF00529 HlyD membrane-fusion protein of T1SS LDH64_03190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_03195 PF08361 MAATS-type transcriptional repressor, C-terminal region LDH64_03195 PF00440 Bacterial regulatory proteins, tetR family LDH64_03200 PF02635 DsrE/DsrF-like family LDH64_03205 PF00924 Mechanosensitive ion channel LDH64_03205 PF12794 Mechanosensitive ion channel inner membrane domain 1 LDH64_03205 PF12795 Mechanosensitive ion channel porin domain LDH64_03210 PF10689 Protein of unknown function (DUF2496) LDH64_03220 PF04304 Protein of unknown function (DUF454) LDH64_03225 PF00156 Phosphoribosyl transferase domain LDH64_03230 PF12169 DNA polymerase III subunits gamma and tau domain III LDH64_03230 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LDH64_03230 PF12170 DNA polymerase III tau subunit V interacting with alpha LDH64_03235 PF02575 YbaB/EbfC DNA-binding family LDH64_03240 PF02132 RecR protein LDH64_03240 PF13662 Toprim domain LDH64_03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_03245 PF00183 Hsp90 protein LDH64_03250 PF05191 Adenylate kinase, active site lid LDH64_03255 PF00762 Ferrochelatase LDH64_03260 PF00970 Oxidoreductase FAD-binding domain LDH64_03260 PF00111 2Fe-2S iron-sulfur cluster binding domain LDH64_03260 PF00175 Oxidoreductase NAD-binding domain LDH64_03265 PF00483 Nucleotidyl transferase LDH64_03270 PF16363 GDP-mannose 4,6 dehydratase LDH64_03275 PF16363 GDP-mannose 4,6 dehydratase LDH64_03280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDH64_03285 PF01370 NAD dependent epimerase/dehydratase family LDH64_03315 PF13439 Glycosyltransferase Family 4 LDH64_03315 PF00534 Glycosyl transferases group 1 LDH64_03325 PF01370 NAD dependent epimerase/dehydratase family LDH64_03330 PF00483 Nucleotidyl transferase LDH64_03330 PF01050 Mannose-6-phosphate isomerase LDH64_03335 PF00535 Glycosyl transferase family 2 LDH64_03340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDH64_03340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDH64_03340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDH64_03340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDH64_03345 PF02706 Chain length determinant protein LDH64_03350 PF00294 pfkB family carbohydrate kinase LDH64_03355 PF00999 Sodium/hydrogen exchanger family LDH64_03355 PF02254 TrkA-N domain LDH64_03360 PF07690 Major Facilitator Superfamily LDH64_03365 PF00149 Calcineurin-like phosphoesterase LDH64_03365 PF02872 5'-nucleotidase, C-terminal domain LDH64_03370 PF00149 Calcineurin-like phosphoesterase LDH64_03370 PF02872 5'-nucleotidase, C-terminal domain LDH64_03375 PF02872 5'-nucleotidase, C-terminal domain LDH64_03375 PF00149 Calcineurin-like phosphoesterase LDH64_03390 PF04073 Aminoacyl-tRNA editing domain LDH64_03395 PF01963 TraB family LDH64_03400 PF00403 Heavy-metal-associated domain LDH64_03405 PF13411 MerR HTH family regulatory protein LDH64_03410 PF01957 NfeD-like C-terminal, partner-binding LDH64_03415 PF01145 SPFH domain / Band 7 family LDH64_03415 PF16200 C-terminal region of band_7 LDH64_03420 PF00085 Thioredoxin LDH64_03425 PF00106 short chain dehydrogenase LDH64_03430 PF13472 GDSL-like Lipase/Acylhydrolase family LDH64_03435 PF00005 ABC transporter LDH64_03445 PF02222 ATP-grasp domain LDH64_03445 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LDH64_03450 PF00731 AIR carboxylase LDH64_03455 PF00149 Calcineurin-like phosphoesterase LDH64_03460 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDH64_03465 PF09190 DALR domain LDH64_03465 PF01406 tRNA synthetases class I (C) catalytic domain LDH64_03470 PF01797 Transposase IS200 like LDH64_03480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LDH64_03480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LDH64_03510 PF00589 Phage integrase family LDH64_03520 PF01066 CDP-alcohol phosphatidyltransferase LDH64_03530 PF01553 Acyltransferase LDH64_03535 PF12147 Putative methyltransferase LDH64_03535 PF12146 Serine aminopeptidase, S33 LDH64_03540 PF00782 Dual specificity phosphatase, catalytic domain LDH64_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_03555 PF03466 LysR substrate binding domain LDH64_03560 PF00248 Aldo/keto reductase family LDH64_03565 PF00248 Aldo/keto reductase family LDH64_03575 PF02796 Helix-turn-helix domain of resolvase LDH64_03575 PF00665 Integrase core domain LDH64_03580 PF01695 IstB-like ATP binding protein LDH64_03590 PF14310 Fibronectin type III-like domain LDH64_03590 PF00933 Glycosyl hydrolase family 3 N terminal domain LDH64_03590 PF01915 Glycosyl hydrolase family 3 C-terminal domain LDH64_03605 PF00872 Transposase, Mutator family LDH64_03625 PF03797 Autotransporter beta-domain LDH64_03625 PF03212 Pertactin LDH64_03625 PF13018 Extended Signal Peptide of Type V secretion system LDH64_03625 PF16168 Adhesin of bacterial autotransporter system, probable stalk LDH64_03640 PF05638 Type VI secretion system effector, Hcp LDH64_03660 PF13693 Winged helix-turn-helix DNA-binding LDH64_03665 PF00912 Transglycosylase LDH64_03665 PF00905 Penicillin binding protein transpeptidase domain LDH64_03665 PF06832 Penicillin-Binding Protein C-terminus Family LDH64_03670 PF00207 Alpha-2-macroglobulin family LDH64_03670 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LDH64_03670 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LDH64_03670 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LDH64_03670 PF17962 Bacterial macroglobulin domain 6 LDH64_03670 PF01835 MG2 domain LDH64_03670 PF07703 Alpha-2-macroglobulin bait region domain LDH64_03685 PF00171 Aldehyde dehydrogenase family LDH64_03690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDH64_03690 PF00205 Thiamine pyrophosphate enzyme, central domain LDH64_03690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDH64_03700 PF13407 Periplasmic binding protein domain LDH64_03705 PF00005 ABC transporter LDH64_03710 PF02653 Branched-chain amino acid transport system / permease component LDH64_03715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDH64_03715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LDH64_03720 PF00294 pfkB family carbohydrate kinase LDH64_03725 PF01261 Xylose isomerase-like TIM barrel LDH64_03730 PF04962 KduI/IolB family LDH64_03740 PF00664 ABC transporter transmembrane region LDH64_03740 PF00005 ABC transporter LDH64_03765 PF00196 Bacterial regulatory proteins, luxR family LDH64_03770 PF00313 'Cold-shock' DNA-binding domain LDH64_03775 PF00313 'Cold-shock' DNA-binding domain LDH64_03780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDH64_03785 PF02416 mttA/Hcf106 family LDH64_03790 PF04055 Radical SAM superfamily LDH64_03790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LDH64_03795 PF03099 Biotin/lipoate A/B protein ligase family LDH64_03800 PF04359 Protein of unknown function (DUF493) LDH64_03805 PF00768 D-alanyl-D-alanine carboxypeptidase LDH64_03805 PF07943 Penicillin-binding protein 5, C-terminal domain LDH64_03810 PF05036 Sporulation related domain LDH64_03810 PF03330 Lytic transglycolase LDH64_03815 PF01098 Cell cycle protein LDH64_03820 PF00905 Penicillin binding protein transpeptidase domain LDH64_03820 PF03717 Penicillin-binding Protein dimerisation domain LDH64_03825 PF02590 Predicted SPOUT methyltransferase LDH64_03835 PF01467 Cytidylyltransferase-like LDH64_03840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LDH64_03840 PF06144 DNA polymerase III, delta subunit LDH64_03845 PF04390 Lipopolysaccharide-assembly LDH64_03850 PF13603 Leucyl-tRNA synthetase, Domain 2 LDH64_03850 PF00133 tRNA synthetases class I (I, L, M and V) LDH64_03850 PF08264 Anticodon-binding domain of tRNA LDH64_03855 PF07295 Zinc-ribbon containing domain LDH64_03860 PF00005 ABC transporter LDH64_03865 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_03870 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_03875 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_03880 PF00795 Carbon-nitrogen hydrolase LDH64_03885 PF00571 CBS domain LDH64_03885 PF03471 Transporter associated domain LDH64_03890 PF02130 Uncharacterized protein family UPF0054 LDH64_03895 PF02562 PhoH-like protein LDH64_03900 PF04055 Radical SAM superfamily LDH64_03900 PF01938 TRAM domain LDH64_03900 PF00919 Uncharacterized protein family UPF0004 LDH64_03905 PF01494 FAD binding domain LDH64_03940 PF00733 Asparagine synthase LDH64_03940 PF13537 Glutamine amidotransferase domain LDH64_03945 PF13344 Haloacid dehalogenase-like hydrolase LDH64_03950 PF00480 ROK family LDH64_03950 PF01047 MarR family LDH64_03955 PF01979 Amidohydrolase family LDH64_03960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LDH64_03965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDH64_03965 PF00367 phosphotransferase system, EIIB LDH64_03965 PF02378 Phosphotransferase system, EIIC LDH64_03970 PF01797 Transposase IS200 like LDH64_03975 PF01797 Transposase IS200 like LDH64_03980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LDH64_03980 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDH64_03985 PF03573 outer membrane porin, OprD family LDH64_03995 PF01475 Ferric uptake regulator family LDH64_04000 PF00258 Flavodoxin LDH64_04010 PF01402 Ribbon-helix-helix protein, copG family LDH64_04015 PF12697 Alpha/beta hydrolase family LDH64_04025 PF13356 Arm DNA-binding domain LDH64_04025 PF00589 Phage integrase family LDH64_04040 PF01695 IstB-like ATP binding protein LDH64_04045 PF02796 Helix-turn-helix domain of resolvase LDH64_04045 PF00665 Integrase core domain LDH64_04055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDH64_04060 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_04065 PF00571 CBS domain LDH64_04065 PF00005 ABC transporter LDH64_04070 PF00268 Ribonucleotide reductase, small chain LDH64_04075 PF08343 Ribonucleotide reductase N-terminal LDH64_04075 PF00317 Ribonucleotide reductase, all-alpha domain LDH64_04075 PF02867 Ribonucleotide reductase, barrel domain LDH64_04080 PF07972 NrdI Flavodoxin like LDH64_04090 PF06392 Acid shock protein repeat LDH64_04095 PF09400 Protein of unknown function (DUF2002) LDH64_04100 PF06711 Protein of unknown function (DUF1198) LDH64_04110 PF00313 'Cold-shock' DNA-binding domain LDH64_04115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_04120 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_04125 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_04125 PF12911 N-terminal TM domain of oligopeptide transport permease C LDH64_04130 PF00005 ABC transporter LDH64_04135 PF00005 ABC transporter LDH64_04140 PF00547 Urease, gamma subunit LDH64_04145 PF00699 Urease beta subunit LDH64_04150 PF01979 Amidohydrolase family LDH64_04150 PF00449 Urease alpha-subunit, N-terminal domain LDH64_04155 PF05194 UreE urease accessory protein, C-terminal domain LDH64_04155 PF02814 UreE urease accessory protein, N-terminal domain LDH64_04160 PF01730 UreF LDH64_04165 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDH64_04170 PF01774 UreD urease accessory protein LDH64_04175 PF01774 UreD urease accessory protein LDH64_04180 PF03253 Urea transporter LDH64_04185 PF03824 High-affinity nickel-transport protein LDH64_04190 PF06411 HdeA/HdeB family LDH64_04195 PF07885 Ion channel LDH64_04195 PF02254 TrkA-N domain LDH64_04200 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDH64_04205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDH64_04215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDH64_04220 PF02378 Phosphotransferase system, EIIC LDH64_04225 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LDH64_04230 PF07883 Cupin domain LDH64_04230 PF12833 Helix-turn-helix domain LDH64_04235 PF04794 YdjC-like protein LDH64_04245 PF03925 SeqA protein C-terminal domain LDH64_04245 PF17206 SeqA protein N-terminal domain LDH64_04250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDH64_04250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDH64_04250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDH64_04250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDH64_04265 PF00486 Transcriptional regulatory protein, C terminal LDH64_04265 PF00072 Response regulator receiver domain LDH64_04270 PF02702 Osmosensitive K+ channel His kinase sensor domain LDH64_04270 PF00512 His Kinase A (phospho-acceptor) domain LDH64_04270 PF13493 Domain of unknown function (DUF4118) LDH64_04270 PF13492 GAF domain LDH64_04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_04275 PF02669 K+-transporting ATPase, c chain LDH64_04285 PF03814 Potassium-transporting ATPase A subunit LDH64_04300 PF10725 Protein of unknown function (DUF2517) LDH64_04305 PF08349 Protein of unknown function (DUF1722) LDH64_04310 PF00875 DNA photolyase LDH64_04310 PF03441 FAD binding domain of DNA photolyase LDH64_04315 PF02112 cAMP phosphodiesterases class-II LDH64_04320 PF01784 NIF3 (NGG1p interacting factor 3) LDH64_04335 PF02626 Carboxyltransferase domain, subdomain A and B LDH64_04340 PF03746 LamB/YcsF family LDH64_04355 PF01470 Pyroglutamyl peptidase LDH64_04360 PF03167 Uracil DNA glycosylase superfamily LDH64_04365 PF01228 Glycine radical LDH64_04375 PF12796 Ankyrin repeats (3 copies) LDH64_04380 PF00270 DEAD/DEAH box helicase LDH64_04380 PF00271 Helicase conserved C-terminal domain LDH64_04385 PF05175 Methyltransferase small domain LDH64_04395 PF00890 FAD binding domain LDH64_04395 PF02910 Fumarate reductase flavoprotein C-term LDH64_04400 PF04542 Sigma-70 region 2 LDH64_04400 PF08281 Sigma-70, region 4 LDH64_04405 PF03872 Anti sigma-E protein RseA, N-terminal domain LDH64_04405 PF03873 Anti sigma-E protein RseA, C-terminal domain LDH64_04410 PF03888 MucB/RseB N-terminal domain LDH64_04410 PF17188 MucB/RseB C-terminal domain LDH64_04425 PF00679 Elongation factor G C-terminus LDH64_04425 PF00009 Elongation factor Tu GTP binding domain LDH64_04425 PF03144 Elongation factor Tu domain 2 LDH64_04425 PF06421 GTP-binding protein LepA C-terminus LDH64_04430 PF10502 Signal peptidase, peptidase S26 LDH64_04435 PF00035 Double-stranded RNA binding motif LDH64_04435 PF14622 Ribonuclease-III-like LDH64_04440 PF01926 50S ribosome-binding GTPase LDH64_04440 PF07650 KH domain LDH64_04445 PF11967 Recombination protein O N terminal LDH64_04445 PF02565 Recombination protein O C terminal LDH64_04450 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LDH64_04455 PF01648 4'-phosphopantetheinyl transferase superfamily LDH64_04460 PF01797 Transposase IS200 like LDH64_04465 PF12838 4Fe-4S dicluster domain LDH64_04470 PF01418 Helix-turn-helix domain, rpiR family LDH64_04470 PF01380 SIS domain LDH64_04475 PF01380 SIS domain LDH64_04485 PF14437 MafB19-like deaminase LDH64_04490 PF01464 Transglycosylase SLT domain LDH64_04490 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_04495 PF02769 AIR synthase related protein, C-terminal domain LDH64_04495 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LDH64_04495 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LDH64_04525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_04525 PF00512 His Kinase A (phospho-acceptor) domain LDH64_04540 PF00072 Response regulator receiver domain LDH64_04540 PF00158 Sigma-54 interaction domain LDH64_04545 PF00795 Carbon-nitrogen hydrolase LDH64_04545 PF02540 NAD synthase LDH64_04550 PF00543 Nitrogen regulatory protein P-II LDH64_04560 PF00175 Oxidoreductase NAD-binding domain LDH64_04560 PF00042 Globin LDH64_04560 PF00970 Oxidoreductase FAD-binding domain LDH64_04565 PF00464 Serine hydroxymethyltransferase LDH64_04575 PF13505 Outer membrane protein beta-barrel domain LDH64_04580 PF12832 MFS_1 like family LDH64_04585 PF00874 PRD domain LDH64_04590 PF06226 Protein of unknown function (DUF1007) LDH64_04595 PF03824 High-affinity nickel-transport protein LDH64_04600 PF00459 Inositol monophosphatase family LDH64_04605 PF00588 SpoU rRNA Methylase family LDH64_04610 PF02082 Transcriptional regulator LDH64_04615 PF00266 Aminotransferase class-V LDH64_04620 PF01592 NifU-like N terminal domain LDH64_04625 PF01521 Iron-sulphur cluster biosynthesis LDH64_04630 PF00226 DnaJ domain LDH64_04630 PF07743 HSCB C-terminal oligomerisation domain LDH64_04635 PF00012 Hsp70 protein LDH64_04640 PF00111 2Fe-2S iron-sulfur cluster binding domain LDH64_04645 PF04384 Iron-sulphur cluster assembly LDH64_04650 PF00883 Cytosol aminopeptidase family, catalytic domain LDH64_04650 PF12404 Peptidase LDH64_04655 PF14581 SseB protein C-terminal domain LDH64_04655 PF07179 SseB protein N-terminal domain LDH64_04670 PF03212 Pertactin LDH64_04670 PF16168 Adhesin of bacterial autotransporter system, probable stalk LDH64_04670 PF03797 Autotransporter beta-domain LDH64_04680 PF00334 Nucleoside diphosphate kinase LDH64_04685 PF04055 Radical SAM superfamily LDH64_04695 PF13464 Domain of unknown function (DUF4115) LDH64_04700 PF04551 GcpE protein LDH64_04705 PF03129 Anticodon binding domain LDH64_04705 PF13393 Histidyl-tRNA synthetase LDH64_04710 PF09976 Tetratricopeptide repeat-like domain LDH64_04715 PF13360 PQQ-like domain LDH64_04720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDH64_04720 PF01926 50S ribosome-binding GTPase LDH64_04730 PF07191 zinc-ribbons LDH64_04735 PF02601 Exonuclease VII, large subunit LDH64_04735 PF13742 OB-fold nucleic acid binding domain LDH64_04740 PF00478 IMP dehydrogenase / GMP reductase domain LDH64_04740 PF00571 CBS domain LDH64_04745 PF02540 NAD synthase LDH64_04745 PF00958 GMP synthase C terminal domain LDH64_04745 PF00117 Glutamine amidotransferase class-I LDH64_04750 PF01797 Transposase IS200 like LDH64_04755 PF05638 Type VI secretion system effector, Hcp LDH64_04785 PF00872 Transposase, Mutator family LDH64_04800 PF08543 Phosphomethylpyrimidine kinase LDH64_04820 PF00781 Diacylglycerol kinase catalytic domain LDH64_04825 PF16325 Peptidase family U32 C-terminal domain LDH64_04825 PF01136 Peptidase family U32 LDH64_04830 PF07411 Domain of unknown function (DUF1508) LDH64_04835 PF00072 Response regulator receiver domain LDH64_04835 PF00486 Transcriptional regulatory protein, C terminal LDH64_04840 PF00672 HAMP domain LDH64_04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_04840 PF00512 His Kinase A (phospho-acceptor) domain LDH64_04845 PF00672 HAMP domain LDH64_04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_04845 PF00512 His Kinase A (phospho-acceptor) domain LDH64_04850 PF07690 Major Facilitator Superfamily LDH64_04855 PF00873 AcrB/AcrD/AcrF family LDH64_04860 PF00873 AcrB/AcrD/AcrF family LDH64_04865 PF13533 Biotin-lipoyl like LDH64_04870 PF00005 ABC transporter LDH64_04870 PF08402 TOBE domain LDH64_04875 PF00155 Aminotransferase class I and II LDH64_04875 PF00392 Bacterial regulatory proteins, gntR family LDH64_04880 PF00202 Aminotransferase class-III LDH64_04890 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_04895 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_04900 PF00012 Hsp70 protein LDH64_04905 PF03448 MgtE intracellular N domain LDH64_04905 PF00571 CBS domain LDH64_04905 PF01769 Divalent cation transporter LDH64_04915 PF02541 Ppx/GppA phosphatase family LDH64_04920 PF02503 Polyphosphate kinase middle domain LDH64_04920 PF13090 Polyphosphate kinase C-terminal domain 2 LDH64_04920 PF17941 Polyphosphate kinase C-terminal domain 1 LDH64_04920 PF13089 Polyphosphate kinase N-terminal domain LDH64_04925 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_04930 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_04935 PF00005 ABC transporter LDH64_04945 PF13302 Acetyltransferase (GNAT) domain LDH64_04950 PF00551 Formyl transferase LDH64_04955 PF00586 AIR synthase related protein, N-terminal domain LDH64_04955 PF02769 AIR synthase related protein, C-terminal domain LDH64_04965 PF01797 Transposase IS200 like LDH64_04970 PF00308 Bacterial dnaA protein LDH64_04975 PF03960 ArsC family LDH64_04980 PF01435 Peptidase family M48 LDH64_04980 PF07720 Tetratricopeptide repeat LDH64_04985 PF01594 AI-2E family transporter LDH64_04995 PF00578 AhpC/TSA family LDH64_05000 PF01842 ACT domain LDH64_05005 PF00701 Dihydrodipicolinate synthetase family LDH64_05010 PF06804 NlpB/DapX lipoprotein LDH64_05015 PF01797 Transposase IS200 like LDH64_05020 PF01259 SAICAR synthetase LDH64_05025 PF04228 Putative neutral zinc metallopeptidase LDH64_05030 PF04284 Protein of unknown function (DUF441) LDH64_05035 PF05127 Helicase LDH64_05035 PF13718 GNAT acetyltransferase 2 LDH64_05035 PF17176 tRNA-binding domain LDH64_05035 PF08351 Domain of unknown function (DUF1726) LDH64_05045 PF13980 Uncharacterised protein family (UPF0370) LDH64_05050 PF02557 D-alanyl-D-alanine carboxypeptidase LDH64_05055 PF07687 Peptidase dimerisation domain LDH64_05055 PF01546 Peptidase family M20/M25/M40 LDH64_05060 PF03960 ArsC family LDH64_05075 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_05080 PF08402 TOBE domain LDH64_05080 PF00005 ABC transporter LDH64_05090 PF00884 Sulfatase LDH64_05095 PF04055 Radical SAM superfamily LDH64_05095 PF13186 Iron-sulfur cluster-binding domain LDH64_05100 PF04307 LexA-binding, inner membrane-associated putative hydrolase LDH64_05110 PF00873 AcrB/AcrD/AcrF family LDH64_05120 PF00196 Bacterial regulatory proteins, luxR family LDH64_05120 PF00072 Response regulator receiver domain LDH64_05125 PF12800 4Fe-4S binding domain LDH64_05125 PF13187 4Fe-4S dicluster domain LDH64_05125 PF00037 4Fe-4S binding domain LDH64_05130 PF03927 NapD protein LDH64_05135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDH64_05135 PF00384 Molybdopterin oxidoreductase LDH64_05135 PF01568 Molydopterin dinucleotide binding domain LDH64_05135 PF10518 TAT (twin-arginine translocation) pathway signal sequence LDH64_05140 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LDH64_05145 PF03264 NapC/NirT cytochrome c family, N-terminal region LDH64_05150 PF00293 NUDIX domain LDH64_05155 PF03949 Malic enzyme, NAD binding domain LDH64_05155 PF00390 Malic enzyme, N-terminal domain LDH64_05155 PF01515 Phosphate acetyl/butaryl transferase LDH64_05160 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LDH64_05165 PF01218 Coproporphyrinogen III oxidase LDH64_05170 PF00583 Acetyltransferase (GNAT) family LDH64_05180 PF16168 Adhesin of bacterial autotransporter system, probable stalk LDH64_05180 PF13018 Extended Signal Peptide of Type V secretion system LDH64_05180 PF03797 Autotransporter beta-domain LDH64_05180 PF03212 Pertactin LDH64_05185 PF04076 Bacterial OB fold (BOF) protein LDH64_05190 PF06572 Protein of unknown function (DUF1131) LDH64_05195 PF04261 Dyp-type peroxidase family LDH64_05200 PF00701 Dihydrodipicolinate synthetase family LDH64_05205 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LDH64_05220 PF00480 ROK family LDH64_05225 PF04074 YhcH/YjgK/YiaL LDH64_05230 PF01380 SIS domain LDH64_05230 PF01418 Helix-turn-helix domain, rpiR family LDH64_05235 PF07690 Major Facilitator Superfamily LDH64_05245 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_05250 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_05255 PF00005 ABC transporter LDH64_05260 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_05275 PF00072 Response regulator receiver domain LDH64_05275 PF00486 Transcriptional regulatory protein, C terminal LDH64_05280 PF00672 HAMP domain LDH64_05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_05280 PF00512 His Kinase A (phospho-acceptor) domain LDH64_05290 PF00155 Aminotransferase class I and II LDH64_05305 PF00474 Sodium:solute symporter family LDH64_05310 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_05310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDH64_05315 PF00005 ABC transporter LDH64_05315 PF02687 FtsX-like permease family LDH64_05315 PF12704 MacB-like periplasmic core domain LDH64_05320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_05325 PF00072 Response regulator receiver domain LDH64_05325 PF00486 Transcriptional regulatory protein, C terminal LDH64_05330 PF00512 His Kinase A (phospho-acceptor) domain LDH64_05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_05330 PF00672 HAMP domain LDH64_05330 PF16527 Two-component sensor protein CpxA, periplasmic domain LDH64_05340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDH64_05345 PF05524 PEP-utilising enzyme, N-terminal LDH64_05345 PF00391 PEP-utilising enzyme, mobile domain LDH64_05345 PF02896 PEP-utilising enzyme, TIM barrel domain LDH64_05350 PF00381 PTS HPr component phosphorylation site LDH64_05355 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_05365 PF04354 ZipA, C-terminal FtsZ-binding domain LDH64_05370 PF00533 BRCA1 C Terminus (BRCT) domain LDH64_05370 PF01653 NAD-dependent DNA ligase adenylation domain LDH64_05370 PF03120 NAD-dependent DNA ligase OB-fold domain LDH64_05370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LDH64_05370 PF12826 Helix-hairpin-helix motif LDH64_05375 PF12843 Putative quorum-sensing-regulated virulence factor LDH64_05400 PF01797 Transposase IS200 like LDH64_05405 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDH64_05435 PF07662 Na+ dependent nucleoside transporter C-terminus LDH64_05435 PF01773 Na+ dependent nucleoside transporter N-terminus LDH64_05435 PF07670 Nucleoside recognition LDH64_05440 PF01566 Natural resistance-associated macrophage protein LDH64_05450 PF00248 Aldo/keto reductase family LDH64_05455 PF03466 LysR substrate binding domain LDH64_05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_05465 PF02685 Glucokinase LDH64_05470 PF07350 Protein of unknown function (DUF1479) LDH64_05475 PF00155 Aminotransferase class I and II LDH64_05480 PF01292 Prokaryotic cytochrome b561 LDH64_05490 PF03783 Curli production assembly/transport component CsgG LDH64_05500 PF05643 Putative bacterial lipoprotein (DUF799) LDH64_05510 PF02613 Nitrate reductase delta subunit LDH64_05515 PF04976 DMSO reductase anchor subunit (DmsC) LDH64_05520 PF13247 4Fe-4S dicluster domain LDH64_05520 PF12800 4Fe-4S binding domain LDH64_05525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDH64_05525 PF00384 Molybdopterin oxidoreductase LDH64_05525 PF01568 Molydopterin dinucleotide binding domain LDH64_05535 PF05638 Type VI secretion system effector, Hcp LDH64_05545 PF00005 ABC transporter LDH64_05550 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_05560 PF13406 Transglycosylase SLT domain LDH64_05605 PF05947 Type VI secretion system, TssF LDH64_05610 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_05610 PF17871 AAA lid domain LDH64_05610 PF07724 AAA domain (Cdc48 subfamily) LDH64_05610 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_05615 PF16970 Type-1 fimbrial protein, A LDH64_05620 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_05620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_05625 PF13953 PapC C-terminal domain LDH64_05625 PF13954 PapC N-terminal domain LDH64_05625 PF00577 Outer membrane usher protein LDH64_05630 PF00872 Transposase, Mutator family LDH64_05635 PF13953 PapC C-terminal domain LDH64_05635 PF13954 PapC N-terminal domain LDH64_05635 PF00577 Outer membrane usher protein LDH64_05645 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LDH64_05650 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LDH64_05665 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LDH64_05675 PF02796 Helix-turn-helix domain of resolvase LDH64_05675 PF00665 Integrase core domain LDH64_05680 PF01695 IstB-like ATP binding protein LDH64_05690 PF14331 ImcF-related N-terminal domain LDH64_05690 PF06744 Type VI secretion protein IcmF C-terminal LDH64_05690 PF06761 Intracellular multiplication and human macrophage-killing LDH64_05695 PF04717 Type VI secretion system, phage-baseplate injector LDH64_05710 PF07024 ImpE protein LDH64_05725 PF03831 PhnA domain LDH64_05725 PF08274 PhnA Zinc-Ribbon LDH64_05735 PF04011 LemA family LDH64_05750 PF00005 ABC transporter LDH64_05755 PF03379 CcmB protein LDH64_05760 PF01578 Cytochrome C assembly protein LDH64_05765 PF04995 Heme exporter protein D (CcmD) LDH64_05770 PF03100 CcmE LDH64_05775 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LDH64_05775 PF01578 Cytochrome C assembly protein LDH64_05780 PF08534 Redoxin LDH64_05785 PF03918 Cytochrome C biogenesis protein LDH64_05790 PF03918 Cytochrome C biogenesis protein LDH64_05795 PF04333 MlaA lipoprotein LDH64_05800 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LDH64_05805 PF04175 Protein of unknown function (DUF406) LDH64_05810 PF00108 Thiolase, N-terminal domain LDH64_05810 PF02803 Thiolase, C-terminal domain LDH64_05815 PF00378 Enoyl-CoA hydratase/isomerase LDH64_05815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDH64_05815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDH64_05820 PF00300 Histidine phosphatase superfamily (branch 1) LDH64_05830 PF01713 Smr domain LDH64_05835 PF05175 Methyltransferase small domain LDH64_05840 PF01264 Chorismate synthase LDH64_05845 PF03411 Penicillin-insensitive murein endopeptidase LDH64_05850 PF01925 Sulfite exporter TauE/SafE LDH64_05855 PF04315 Elongation factor P hydroxylase LDH64_05860 PF08891 YfcL protein LDH64_05865 PF01266 FAD dependent oxidoreductase LDH64_05865 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LDH64_05870 PF02801 Beta-ketoacyl synthase, C-terminal domain LDH64_05870 PF00109 Beta-ketoacyl synthase, N-terminal domain LDH64_05880 PF01177 Asp/Glu/Hydantoin racemase LDH64_05885 PF00419 Fimbrial protein LDH64_05895 PF00892 EamA-like transporter family LDH64_05905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDH64_05905 PF11890 Domain of unknown function (DUF3410) LDH64_05905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDH64_05910 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDH64_05910 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDH64_05915 PF01416 tRNA pseudouridine synthase LDH64_05920 PF09335 SNARE associated Golgi protein LDH64_05925 PF01039 Carboxyl transferase domain LDH64_05925 PF17848 Acetyl-coA carboxylase zinc finger domain LDH64_05930 PF02875 Mur ligase family, glutamate ligase domain LDH64_05930 PF08245 Mur ligase middle domain LDH64_05935 PF05036 Sporulation related domain LDH64_05940 PF02674 Colicin V production protein LDH64_05945 PF00156 Phosphoribosyl transferase domain LDH64_05950 PF02441 Flavoprotein LDH64_05955 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_05960 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_05965 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_05970 PF00005 ABC transporter LDH64_05975 PF08338 Domain of unknown function (DUF1731) LDH64_05975 PF01370 NAD dependent epimerase/dehydratase family LDH64_05985 PF12850 Calcineurin-like phosphoesterase superfamily domain LDH64_05990 PF00293 NUDIX domain LDH64_05995 PF03611 PTS system sugar-specific permease component LDH64_06005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDH64_06010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDH64_06010 PF00356 Bacterial regulatory proteins, lacI family LDH64_06020 PF01515 Phosphate acetyl/butaryl transferase LDH64_06020 PF07085 DRTGG domain LDH64_06025 PF00871 Acetokinase family LDH64_06030 PF04217 Protein of unknown function, DUF412 LDH64_06035 PF03887 YfbU domain LDH64_06040 PF13419 Haloacid dehalogenase-like hydrolase LDH64_06045 PF03600 Citrate transporter LDH64_06045 PF02080 TrkA-C domain LDH64_06060 PF00155 Aminotransferase class I and II LDH64_06065 PF03466 LysR substrate binding domain LDH64_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_06070 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LDH64_06075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDH64_06080 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LDH64_06080 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LDH64_06090 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LDH64_06090 PF10531 SLBB domain LDH64_06090 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LDH64_06095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDH64_06095 PF00384 Molybdopterin oxidoreductase LDH64_06095 PF01568 Molydopterin dinucleotide binding domain LDH64_06095 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LDH64_06100 PF00146 NADH dehydrogenase LDH64_06105 PF12838 4Fe-4S dicluster domain LDH64_06110 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LDH64_06115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LDH64_06120 PF00361 Proton-conducting membrane transporter LDH64_06120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDH64_06125 PF00361 Proton-conducting membrane transporter LDH64_06130 PF00361 Proton-conducting membrane transporter LDH64_06140 PF04074 YhcH/YjgK/YiaL LDH64_06145 PF01202 Shikimate kinase LDH64_06150 PF00106 short chain dehydrogenase LDH64_06155 PF02638 Glycosyl hydrolase-like 10 LDH64_06160 PF00356 Bacterial regulatory proteins, lacI family LDH64_06165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDH64_06165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDH64_06170 PF07690 Major Facilitator Superfamily LDH64_06175 PF03928 Haem-degrading LDH64_06180 PF00920 Dehydratase family LDH64_06190 PF05957 Bacterial protein of unknown function (DUF883) LDH64_06200 PF00425 chorismate binding enzyme LDH64_06205 PF16582 Middle domain of thiamine pyrophosphate LDH64_06205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDH64_06205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDH64_06210 PF12697 Alpha/beta hydrolase family LDH64_06215 PF00378 Enoyl-CoA hydratase/isomerase LDH64_06220 PF13378 Enolase C-terminal domain-like LDH64_06225 PF13193 AMP-binding enzyme C-terminal domain LDH64_06225 PF00501 AMP-binding enzyme LDH64_06230 PF02885 Glycosyl transferase family, helical bundle domain LDH64_06240 PF07338 Protein of unknown function (DUF1471) LDH64_06245 PF05971 RNA methyltransferase LDH64_06260 PF01695 IstB-like ATP binding protein LDH64_06265 PF02796 Helix-turn-helix domain of resolvase LDH64_06265 PF00665 Integrase core domain LDH64_06270 PF00465 Iron-containing alcohol dehydrogenase LDH64_06270 PF00171 Aldehyde dehydrogenase family LDH64_06275 PF01914 MarC family integral membrane protein LDH64_06280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_06285 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_06290 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_06290 PF12911 N-terminal TM domain of oligopeptide transport permease C LDH64_06295 PF00005 ABC transporter LDH64_06295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_06300 PF00005 ABC transporter LDH64_06300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_06310 PF04269 Protein of unknown function, DUF440 LDH64_06315 PF13091 PLD-like domain LDH64_06315 PF13396 Phospholipase_D-nuclease N-terminal LDH64_06330 PF13505 Outer membrane protein beta-barrel domain LDH64_06345 PF03795 YCII-related domain LDH64_06350 PF03544 Gram-negative bacterial TonB protein C-terminal LDH64_06355 PF00872 Transposase, Mutator family LDH64_06360 PF12111 Polyribonucleotide phosphorylase C terminal LDH64_06360 PF10150 Ribonuclease E/G family LDH64_06360 PF00575 S1 RNA binding domain LDH64_06365 PF00849 RNA pseudouridylate synthase LDH64_06365 PF01479 S4 domain LDH64_06370 PF02545 Maf-like protein LDH64_06375 PF02620 Large ribosomal RNA subunit accumulation protein YceD LDH64_06380 PF01783 Ribosomal L32p protein family LDH64_06385 PF02504 Fatty acid synthesis protein LDH64_06390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDH64_06390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDH64_06395 PF00698 Acyl transferase domain LDH64_06405 PF00550 Phosphopantetheine attachment site LDH64_06410 PF02801 Beta-ketoacyl synthase, C-terminal domain LDH64_06410 PF00109 Beta-ketoacyl synthase, N-terminal domain LDH64_06420 PF01063 Amino-transferase class IV LDH64_06430 PF02618 YceG-like family LDH64_06435 PF02223 Thymidylate kinase LDH64_06440 PF09115 DNA polymerase III, delta subunit, C terminal LDH64_06445 PF01026 TatD related DNase LDH64_06450 PF00367 phosphotransferase system, EIIB LDH64_06450 PF02378 Phosphotransferase system, EIIC LDH64_06455 PF01797 Transposase IS200 like LDH64_06465 PF08501 Shikimate dehydrogenase substrate binding domain LDH64_06470 PF01230 HIT domain LDH64_06475 PF07233 Protein of unknown function (DUF1425) LDH64_06480 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LDH64_06480 PF13036 Peptidoglycan-synthase activator LpoB LDH64_06485 PF01636 Phosphotransferase enzyme family LDH64_06490 PF00933 Glycosyl hydrolase family 3 N terminal domain LDH64_06495 PF05728 Uncharacterised protein family (UPF0227) LDH64_06500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_06515 PF00872 Transposase, Mutator family LDH64_06520 PF05433 Glycine zipper 2TM domain LDH64_06525 PF02559 CarD-like/TRCF domain LDH64_06525 PF00270 DEAD/DEAH box helicase LDH64_06525 PF00271 Helicase conserved C-terminal domain LDH64_06525 PF03461 TRCF domain LDH64_06525 PF17757 UvrB interaction domain LDH64_06530 PF02687 FtsX-like permease family LDH64_06530 PF12704 MacB-like periplasmic core domain LDH64_06535 PF00005 ABC transporter LDH64_06540 PF02687 FtsX-like permease family LDH64_06540 PF12704 MacB-like periplasmic core domain LDH64_06550 PF02146 Sir2 family LDH64_06555 PF01546 Peptidase family M20/M25/M40 LDH64_06555 PF07687 Peptidase dimerisation domain LDH64_06560 PF08007 Cupin superfamily protein LDH64_06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_06565 PF08918 PhoQ Sensor LDH64_06570 PF00072 Response regulator receiver domain LDH64_06570 PF00486 Transcriptional regulatory protein, C terminal LDH64_06580 PF00206 Lyase LDH64_06580 PF08328 Adenylosuccinate lyase C-terminal LDH64_06585 PF04356 Protein of unknown function (DUF489) LDH64_06595 PF00293 NUDIX domain LDH64_06600 PF00849 RNA pseudouridylate synthase LDH64_06605 PF00180 Isocitrate/isopropylmalate dehydrogenase LDH64_06610 PF00356 Bacterial regulatory proteins, lacI family LDH64_06610 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDH64_06620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDH64_06620 PF08447 PAS fold LDH64_06625 PF05368 NmrA-like family LDH64_06630 PF01638 HxlR-like helix-turn-helix LDH64_06640 PF00328 Histidine phosphatase superfamily (branch 2) LDH64_06645 PF14001 YdfZ protein LDH64_06655 PF01037 Lrp/AsnC ligand binding domain LDH64_06655 PF13404 AsnC-type helix-turn-helix domain LDH64_06660 PF10777 Inner membrane protein YlaC LDH64_06665 PF14765 Polyketide synthase dehydratase LDH64_06665 PF00550 Phosphopantetheine attachment site LDH64_06665 PF08659 KR domain LDH64_06665 PF00109 Beta-ketoacyl synthase, N-terminal domain LDH64_06665 PF02801 Beta-ketoacyl synthase, C-terminal domain LDH64_06665 PF00107 Zinc-binding dehydrogenase LDH64_06665 PF08240 Alcohol dehydrogenase GroES-like domain LDH64_06665 PF00698 Acyl transferase domain LDH64_06665 PF16197 Ketoacyl-synthetase C-terminal extension LDH64_06670 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LDH64_06670 PF02929 Beta galactosidase small chain LDH64_06670 PF16353 Domain of unknown function(DUF4981) LDH64_06670 PF00703 Glycosyl hydrolases family 2 LDH64_06670 PF02837 Glycosyl hydrolases family 2, sugar binding domain LDH64_06675 PF00313 'Cold-shock' DNA-binding domain LDH64_06680 PF10781 Dextransucrase DSRB LDH64_06690 PF02308 MgtC family LDH64_06695 PF00689 Cation transporting ATPase, C-terminus LDH64_06695 PF00690 Cation transporter/ATPase, N-terminus LDH64_06705 PF05280 Flagellar transcriptional activator (FlhC) LDH64_06710 PF01618 MotA/TolQ/ExbB proton channel family LDH64_06725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_06725 PF09078 CheY binding LDH64_06725 PF01627 Hpt domain LDH64_06725 PF01584 CheW-like domain LDH64_06725 PF02895 Signal transducing histidine kinase, homodimeric domain LDH64_06730 PF01584 CheW-like domain LDH64_06735 PF07690 Major Facilitator Superfamily LDH64_06740 PF01042 Endoribonuclease L-PSP LDH64_06750 PF13309 HTH domain LDH64_06750 PF08348 YheO-like PAS domain LDH64_06755 PF12951 Passenger-associated-transport-repeat LDH64_06770 PF02203 Tar ligand binding domain homologue LDH64_06770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDH64_06770 PF00672 HAMP domain LDH64_06775 PF00672 HAMP domain LDH64_06775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDH64_06775 PF02203 Tar ligand binding domain homologue LDH64_06780 PF03705 CheR methyltransferase, all-alpha domain LDH64_06780 PF01739 CheR methyltransferase, SAM binding domain LDH64_06785 PF00072 Response regulator receiver domain LDH64_06785 PF01339 CheB methylesterase LDH64_06790 PF00072 Response regulator receiver domain LDH64_06795 PF04344 Chemotaxis phosphatase, CheZ LDH64_06800 PF01510 N-acetylmuramoyl-L-alanine amidase LDH64_06815 PF00842 Alanine racemase, C-terminal domain LDH64_06815 PF01168 Alanine racemase, N-terminal domain LDH64_06845 PF01695 IstB-like ATP binding protein LDH64_06850 PF02796 Helix-turn-helix domain of resolvase LDH64_06850 PF00665 Integrase core domain LDH64_06865 PF07351 Protein of unknown function (DUF1480) LDH64_06880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_06880 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_06900 PF02470 MlaD protein LDH64_06905 PF04403 Paraquat-inducible protein A LDH64_06910 PF13185 GAF domain LDH64_06915 PF17516 ProQ C-terminal domain LDH64_06915 PF04352 ProQ/FINO family LDH64_06920 PF00595 PDZ domain LDH64_06920 PF11818 C-terminal domain of tail specific protease (DUF3340) LDH64_06920 PF17804 Tail specific protease N-terminal domain LDH64_06920 PF03572 Peptidase family S41 LDH64_06925 PF01435 Peptidase family M48 LDH64_06930 PF00419 Fimbrial protein LDH64_06935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_06935 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_06940 PF00577 Outer membrane usher protein LDH64_06940 PF13954 PapC N-terminal domain LDH64_06940 PF13953 PapC C-terminal domain LDH64_06950 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_06950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_06955 PF07690 Major Facilitator Superfamily LDH64_06960 PF14583 Oligogalacturonate lyase LDH64_06965 PF01614 Bacterial transcriptional regulator LDH64_06965 PF09339 IclR helix-turn-helix domain LDH64_06970 PF01510 N-acetylmuramoyl-L-alanine amidase LDH64_06975 PF00375 Sodium:dicarboxylate symporter family LDH64_06980 PF04307 LexA-binding, inner membrane-associated putative hydrolase LDH64_06985 PF06178 Oligogalacturonate-specific porin protein (KdgM) LDH64_06990 PF01547 Bacterial extracellular solute-binding protein LDH64_06995 PF00005 ABC transporter LDH64_06995 PF17912 MalK OB fold domain LDH64_06995 PF03459 TOBE domain LDH64_07000 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_07005 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_07010 PF06917 Periplasmic pectate lyase LDH64_07020 PF04962 KduI/IolB family LDH64_07025 PF07883 Cupin domain LDH64_07030 PF00872 Transposase, Mutator family LDH64_07035 PF13419 Haloacid dehalogenase-like hydrolase LDH64_07040 PF14002 YniB-like protein LDH64_07045 PF03881 Fructosamine kinase LDH64_07055 PF00950 ABC 3 transport family LDH64_07060 PF00950 ABC 3 transport family LDH64_07065 PF00005 ABC transporter LDH64_07070 PF01297 Zinc-uptake complex component A periplasmic LDH64_07075 PF01464 Transglycosylase SLT domain LDH64_07080 PF01914 MarC family integral membrane protein LDH64_07090 PF13619 KTSC domain LDH64_07095 PF02824 TGS domain LDH64_07095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDH64_07095 PF03129 Anticodon binding domain LDH64_07095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDH64_07100 PF00707 Translation initiation factor IF-3, C-terminal domain LDH64_07100 PF05198 Translation initiation factor IF-3, N-terminal domain LDH64_07105 PF01632 Ribosomal protein L35 LDH64_07110 PF00453 Ribosomal protein L20 LDH64_07120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LDH64_07120 PF01409 tRNA synthetases class II core domain (F) LDH64_07125 PF03483 B3/4 domain LDH64_07125 PF03484 tRNA synthetase B5 domain LDH64_07125 PF03147 Ferredoxin-fold anticodon binding domain LDH64_07125 PF01588 Putative tRNA binding domain LDH64_07125 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LDH64_07130 PF00216 Bacterial DNA-binding protein LDH64_07135 PF01797 Transposase IS200 like LDH64_07145 PF01032 FecCD transport family LDH64_07150 PF00255 Glutathione peroxidase LDH64_07155 PF00005 ABC transporter LDH64_07160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDH64_07165 PF00535 Glycosyl transferase family 2 LDH64_07170 PF00551 Formyl transferase LDH64_07170 PF01370 NAD dependent epimerase/dehydratase family LDH64_07170 PF02911 Formyl transferase, C-terminal domain LDH64_07175 PF01522 Polysaccharide deacetylase LDH64_07180 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LDH64_07185 PF00892 EamA-like transporter family LDH64_07200 PF00877 NlpC/P60 family LDH64_07205 PF03099 Biotin/lipoate A/B protein ligase family LDH64_07205 PF10437 Bacterial lipoate protein ligase C-terminus LDH64_07215 PF00793 DAHP synthetase I family LDH64_07220 PF03618 Kinase/pyrophosphorylase LDH64_07225 PF00391 PEP-utilising enzyme, mobile domain LDH64_07225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDH64_07225 PF02896 PEP-utilising enzyme, TIM barrel domain LDH64_07235 PF01594 AI-2E family transporter LDH64_07240 PF02913 FAD linked oxidases, C-terminal domain LDH64_07240 PF01565 FAD binding domain LDH64_07240 PF13183 4Fe-4S dicluster domain LDH64_07245 PF03061 Thioesterase superfamily LDH64_07250 PF01521 Iron-sulphur cluster biosynthesis LDH64_07255 PF01458 Uncharacterized protein family (UPF0051) LDH64_07260 PF00005 ABC transporter LDH64_07265 PF01458 Uncharacterized protein family (UPF0051) LDH64_07270 PF00266 Aminotransferase class-V LDH64_07275 PF02657 Fe-S metabolism associated domain LDH64_07280 PF01476 LysM domain LDH64_07280 PF17969 L,D-transpeptidase C-terminal domain LDH64_07280 PF03734 L,D-transpeptidase catalytic domain LDH64_07285 PF01695 IstB-like ATP binding protein LDH64_07290 PF02796 Helix-turn-helix domain of resolvase LDH64_07290 PF00665 Integrase core domain LDH64_07300 PF04728 Lipoprotein leucine-zipper LDH64_07305 PF00224 Pyruvate kinase, barrel domain LDH64_07305 PF02887 Pyruvate kinase, alpha/beta domain LDH64_07320 PF01554 MatE LDH64_07325 PF00677 Lumazine binding domain LDH64_07335 PF07690 Major Facilitator Superfamily LDH64_07340 PF03466 LysR substrate binding domain LDH64_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_07345 PF00356 Bacterial regulatory proteins, lacI family LDH64_07355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDH64_07355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDH64_07360 PF00877 NlpC/P60 family LDH64_07365 PF00462 Glutaredoxin LDH64_07375 PF00929 Exonuclease LDH64_07380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDH64_07385 PF18807 Tripartite Tc toxins repeat LDH64_07385 PF14431 YwqJ-like deaminase LDH64_07390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDH64_07395 PF16925 Tetracyclin repressor-like, C-terminal domain LDH64_07395 PF00440 Bacterial regulatory proteins, tetR family LDH64_07400 PF00884 Sulfatase LDH64_07400 PF08019 Phosphoethanolamine transferase EptA/EptB LDH64_07405 PF06945 Protein of unknown function (DUF1289) LDH64_07410 PF00248 Aldo/keto reductase family LDH64_07415 PF01047 MarR family LDH64_07420 PF05433 Glycine zipper 2TM domain LDH64_07425 PF03702 Anhydro-N-acetylmuramic acid kinase LDH64_07430 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme LDH64_07435 PF01243 Pyridoxamine 5'-phosphate oxidase LDH64_07435 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LDH64_07440 PF00579 tRNA synthetases class I (W and Y) LDH64_07440 PF01479 S4 domain LDH64_07445 PF08543 Phosphomethylpyrimidine kinase LDH64_07450 PF00043 Glutathione S-transferase, C-terminal domain LDH64_07450 PF02798 Glutathione S-transferase, N-terminal domain LDH64_07455 PF11656 YjbD family (DUF3811) LDH64_07460 PF04893 Yip1 domain LDH64_07465 PF00854 POT family LDH64_07475 PF00005 ABC transporter LDH64_07480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_07480 PF00005 ABC transporter LDH64_07485 PF12911 N-terminal TM domain of oligopeptide transport permease C LDH64_07485 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_07490 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_07495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_07505 PF02954 Bacterial regulatory protein, Fis family LDH64_07505 PF00158 Sigma-54 interaction domain LDH64_07510 PF04012 PspA/IM30 family LDH64_07515 PF06667 Phage shock protein B LDH64_07520 PF04024 PspC domain LDH64_07530 PF04317 YcjX-like family, DUF463 LDH64_07535 PF05128 Domain of unknown function (DUF697) LDH64_07540 PF08808 RES domain LDH64_07545 PF09722 Protein of unknown function (DUF2384) LDH64_07550 PF00158 Sigma-54 interaction domain LDH64_07550 PF18024 Helix-turn-helix domain LDH64_07555 PF01797 Transposase IS200 like LDH64_07560 PF08534 Redoxin LDH64_07565 PF13378 Enolase C-terminal domain-like LDH64_07565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LDH64_07570 PF00246 Zinc carboxypeptidase LDH64_07575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_07580 PF01544 CorA-like Mg2+ transporter protein LDH64_07590 PF07859 alpha/beta hydrolase fold LDH64_07595 PF01171 PP-loop family LDH64_07600 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LDH64_07600 PF10371 Domain of unknown function LDH64_07600 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LDH64_07600 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LDH64_07600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDH64_07605 PF00893 Small Multidrug Resistance protein LDH64_07610 PF02308 MgtC family LDH64_07615 PF03891 Domain of unknown function (DUF333) LDH64_07620 PF03724 META domain LDH64_07625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDH64_07625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDH64_07630 PF11739 Dicarboxylate transport LDH64_07635 PF13617 YnbE-like lipoprotein LDH64_07640 PF07027 Protein of unknown function (DUF1318) LDH64_07645 PF08125 Mannitol dehydrogenase C-terminal domain LDH64_07645 PF01232 Mannitol dehydrogenase Rossmann domain LDH64_07650 PF04198 Putative sugar-binding domain LDH64_07650 PF00325 Bacterial regulatory proteins, crp family LDH64_07655 PF02525 Flavodoxin-like fold LDH64_07660 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LDH64_07660 PF00271 Helicase conserved C-terminal domain LDH64_07660 PF00270 DEAD/DEAH box helicase LDH64_07660 PF11898 Domain of unknown function (DUF3418) LDH64_07660 PF04408 Helicase associated domain (HA2) LDH64_07675 PF00089 Trypsin LDH64_07685 PF01292 Prokaryotic cytochrome b561 LDH64_07690 PF04264 YceI-like domain LDH64_07705 PF18807 Tripartite Tc toxins repeat LDH64_07705 PF14431 YwqJ-like deaminase LDH64_07715 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LDH64_07720 PF00672 HAMP domain LDH64_07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_07720 PF00512 His Kinase A (phospho-acceptor) domain LDH64_07725 PF00072 Response regulator receiver domain LDH64_07725 PF00486 Transcriptional regulatory protein, C terminal LDH64_07735 PF13520 Amino acid permease LDH64_07740 PF07338 Protein of unknown function (DUF1471) LDH64_07750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LDH64_07750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LDH64_07750 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LDH64_07755 PF02233 NAD(P) transhydrogenase beta subunit LDH64_07760 PF00582 Universal stress protein family LDH64_07765 PF13545 Crp-like helix-turn-helix domain LDH64_07765 PF00027 Cyclic nucleotide-binding domain LDH64_07770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDH64_07770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDH64_07775 PF00245 Alkaline phosphatase LDH64_07785 PF13419 Haloacid dehalogenase-like hydrolase LDH64_07790 PF01842 ACT domain LDH64_07795 PF00205 Thiamine pyrophosphate enzyme, central domain LDH64_07795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDH64_07795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDH64_07825 PF01048 Phosphorylase superfamily LDH64_07825 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LDH64_07830 PF00005 ABC transporter LDH64_07835 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_07840 PF09084 NMT1/THI5 like LDH64_07845 PF13407 Periplasmic binding protein domain LDH64_07855 PF00356 Bacterial regulatory proteins, lacI family LDH64_07860 PF00654 Voltage gated chloride channel LDH64_07870 PF00480 ROK family LDH64_07875 PF03466 LysR substrate binding domain LDH64_07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_07885 PF05472 DNA replication terminus site-binding protein (Ter protein) LDH64_07890 PF10415 Fumarase C C-terminus LDH64_07890 PF00206 Lyase LDH64_07895 PF01238 Phosphomannose isomerase type I LDH64_07900 PF06097 Bacterial protein of unknown function (DUF945) LDH64_07910 PF13593 SBF-like CPA transporter family (DUF4137) LDH64_07915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDH64_07915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LDH64_07920 PF02311 AraC-like ligand binding domain LDH64_07920 PF12833 Helix-turn-helix domain LDH64_07925 PF02653 Branched-chain amino acid transport system / permease component LDH64_07930 PF00005 ABC transporter LDH64_07935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDH64_07940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_07945 PF11762 L-arabinose isomerase C-terminal domain LDH64_07945 PF02610 L-arabinose isomerase LDH64_07950 PF00664 ABC transporter transmembrane region LDH64_07950 PF03412 Peptidase C39 family LDH64_07950 PF00005 ABC transporter LDH64_07960 PF13533 Biotin-lipoyl like LDH64_07965 PF00664 ABC transporter transmembrane region LDH64_07965 PF00005 ABC transporter LDH64_07965 PF03412 Peptidase C39 family LDH64_07970 PF03412 Peptidase C39 family LDH64_07970 PF00664 ABC transporter transmembrane region LDH64_07970 PF00005 ABC transporter LDH64_07975 PF10754 Protein of unknown function (DUF2569) LDH64_07980 PF02508 Rnf-Nqr subunit, membrane protein LDH64_07985 PF04060 Putative Fe-S cluster LDH64_07990 PF10531 SLBB domain LDH64_07990 PF13375 RnfC Barrel sandwich hybrid domain LDH64_07990 PF13237 4Fe-4S dicluster domain LDH64_07990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LDH64_07995 PF12833 Helix-turn-helix domain LDH64_07995 PF06445 GyrI-like small molecule binding domain LDH64_08000 PF03116 NQR2, RnfD, RnfE family LDH64_08005 PF04205 FMN-binding domain LDH64_08010 PF02508 Rnf-Nqr subunit, membrane protein LDH64_08015 PF00730 HhH-GPD superfamily base excision DNA repair protein LDH64_08015 PF10576 Iron-sulfur binding domain of endonuclease III LDH64_08015 PF00633 Helix-hairpin-helix motif LDH64_08020 PF01370 NAD dependent epimerase/dehydratase family LDH64_08025 PF07690 Major Facilitator Superfamily LDH64_08030 PF17876 Cold shock domain LDH64_08030 PF00773 RNB domain LDH64_08030 PF00575 S1 RNA binding domain LDH64_08030 PF08206 Ribonuclease B OB domain LDH64_08035 PF02554 Carbon starvation protein CstA LDH64_08035 PF13722 5TM C-terminal transporter carbon starvation CstA LDH64_08040 PF04328 Selenoprotein, putative LDH64_08045 PF00923 Transaldolase/Fructose-6-phosphate aldolase LDH64_08055 PF00596 Class II Aldolase and Adducin N-terminal domain LDH64_08060 PF05433 Glycine zipper 2TM domain LDH64_08065 PF01253 Translation initiation factor SUI1 LDH64_08070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LDH64_08080 PF18073 Rubredoxin metal binding domain LDH64_08085 PF06305 Lipopolysaccharide assembly protein A domain LDH64_08090 PF01569 PAP2 superfamily LDH64_08095 PF00925 GTP cyclohydrolase II LDH64_08100 PF00330 Aconitase family (aconitate hydratase) LDH64_08100 PF00694 Aconitase C-terminal domain LDH64_08110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_08110 PF03466 LysR substrate binding domain LDH64_08115 PF08272 Topoisomerase I zinc-ribbon-like LDH64_08115 PF01131 DNA topoisomerase LDH64_08115 PF01751 Toprim domain LDH64_08115 PF01396 Topoisomerase DNA binding C4 zinc finger LDH64_08125 PF10692 Protein of unknown function (DUF2498) LDH64_08130 PF01343 Peptidase family S49 LDH64_08130 PF08496 Peptidase family S49 N-terminal LDH64_08135 PF00106 short chain dehydrogenase LDH64_08140 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LDH64_08145 PF00849 RNA pseudouridylate synthase LDH64_08145 PF01479 S4 domain LDH64_08150 PF01300 Telomere recombination LDH64_08155 PF02811 PHP domain LDH64_08165 PF00425 chorismate binding enzyme LDH64_08165 PF04715 Anthranilate synthase component I, N terminal region LDH64_08175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LDH64_08175 PF00218 Indole-3-glycerol phosphate synthase LDH64_08180 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_08185 PF00290 Tryptophan synthase alpha chain LDH64_08195 PF03922 OmpW family LDH64_08220 PF04279 Intracellular septation protein A LDH64_08225 PF03061 Thioesterase superfamily LDH64_08230 PF00872 Transposase, Mutator family LDH64_08240 PF03992 Antibiotic biosynthesis monooxygenase LDH64_08245 PF01979 Amidohydrolase family LDH64_08250 PF06183 DinI-like family LDH64_08255 PF13991 BssS protein family LDH64_08260 PF00872 Transposase, Mutator family LDH64_08265 PF01266 FAD dependent oxidoreductase LDH64_08270 PF00196 Bacterial regulatory proteins, luxR family LDH64_08280 PF01594 AI-2E family transporter LDH64_08285 PF17773 UPF0176 acylphosphatase like domain LDH64_08285 PF00581 Rhodanese-like domain LDH64_08285 PF12368 Rhodanase C-terminal LDH64_08300 PF00765 Autoinducer synthase LDH64_08305 PF03472 Autoinducer binding domain LDH64_08305 PF00196 Bacterial regulatory proteins, luxR family LDH64_08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_08310 PF03466 LysR substrate binding domain LDH64_08315 PF00083 Sugar (and other) transporter LDH64_08325 PF00248 Aldo/keto reductase family LDH64_08330 PF09618 CRISPR-associated protein (Cas_Csy4) LDH64_08335 PF09615 CRISPR-associated protein (Cas_Csy3) LDH64_08340 PF09614 CRISPR-associated protein (Cas_Csy2) LDH64_08345 PF09611 CRISPR-associated protein (Cas_Csy1) LDH64_08355 PF01867 CRISPR associated protein Cas1 LDH64_08360 PF00924 Mechanosensitive ion channel LDH64_08380 PF04041 beta-1,4-mannooligosaccharide phosphorylase LDH64_08385 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_08390 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_08400 PF00356 Bacterial regulatory proteins, lacI family LDH64_08405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDH64_08405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDH64_08405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDH64_08405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDH64_08410 PF00005 ABC transporter LDH64_08410 PF17912 MalK OB fold domain LDH64_08420 PF05594 Haemagluttinin repeat LDH64_08420 PF13332 Hemagglutinin repeat LDH64_08420 PF05860 haemagglutination activity domain LDH64_08420 PF15526 Novel toxin 21 LDH64_08420 PF04829 Pre-toxin domain with VENN motif LDH64_08465 PF04829 Pre-toxin domain with VENN motif LDH64_08465 PF05860 haemagglutination activity domain LDH64_08465 PF13018 Extended Signal Peptide of Type V secretion system LDH64_08465 PF13332 Hemagglutinin repeat LDH64_08470 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDH64_08470 PF17287 POTRA domain LDH64_08470 PF08479 POTRA domain, ShlB-type LDH64_08475 PF00175 Oxidoreductase NAD-binding domain LDH64_08475 PF00111 2Fe-2S iron-sulfur cluster binding domain LDH64_08475 PF00970 Oxidoreductase FAD-binding domain LDH64_08480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LDH64_08480 PF00355 Rieske [2Fe-2S] domain LDH64_08485 PF02028 BCCT, betaine/carnitine/choline family transporter LDH64_08495 PF00180 Isocitrate/isopropylmalate dehydrogenase LDH64_08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_08500 PF03466 LysR substrate binding domain LDH64_08505 PF00356 Bacterial regulatory proteins, lacI family LDH64_08510 PF02653 Branched-chain amino acid transport system / permease component LDH64_08515 PF00005 ABC transporter LDH64_08520 PF13407 Periplasmic binding protein domain LDH64_08525 PF08240 Alcohol dehydrogenase GroES-like domain LDH64_08525 PF00107 Zinc-binding dehydrogenase LDH64_08545 PF13505 Outer membrane protein beta-barrel domain LDH64_08550 PF00892 EamA-like transporter family LDH64_08560 PF13649 Methyltransferase domain LDH64_08565 PF00210 Ferritin-like domain LDH64_08575 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_08580 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_08585 PF00005 ABC transporter LDH64_08590 PF13426 PAS domain LDH64_08590 PF08447 PAS fold LDH64_08590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDH64_08595 PF02796 Helix-turn-helix domain of resolvase LDH64_08595 PF00665 Integrase core domain LDH64_08600 PF01695 IstB-like ATP binding protein LDH64_08605 PF00265 Thymidine kinase LDH64_08610 PF00816 H-NS histone family LDH64_08615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDH64_08615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDH64_08615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDH64_08620 PF00072 Response regulator receiver domain LDH64_08625 PF02810 SEC-C motif LDH64_08630 PF00551 Formyl transferase LDH64_08630 PF01842 ACT domain LDH64_08635 PF00872 Transposase, Mutator family LDH64_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_08655 PF03466 LysR substrate binding domain LDH64_08660 PF03372 Endonuclease/Exonuclease/phosphatase family LDH64_08665 PF00293 NUDIX domain LDH64_08670 PF07383 Protein of unknown function (DUF1496) LDH64_08675 PF01131 DNA topoisomerase LDH64_08675 PF01751 Toprim domain LDH64_08680 PF02769 AIR synthase related protein, C-terminal domain LDH64_08680 PF00586 AIR synthase related protein, N-terminal domain LDH64_08685 PF00881 Nitroreductase family LDH64_08690 PF01343 Peptidase family S49 LDH64_08695 PF00710 Asparaginase, N-terminal LDH64_08695 PF17763 Glutaminase/Asparaginase C-terminal domain LDH64_08700 PF00857 Isochorismatase family LDH64_08705 PF07023 Protein of unknown function (DUF1315) LDH64_08710 PF01641 SelR domain LDH64_08715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDH64_08715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDH64_08720 PF01263 Aldose 1-epimerase LDH64_08725 PF06629 MltA-interacting protein MipA LDH64_08730 PF06798 PrkA serine protein kinase C-terminal domain LDH64_08730 PF08298 PrkA AAA domain LDH64_08735 PF04285 Protein of unknown function (DUF444) LDH64_08745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_08745 PF03466 LysR substrate binding domain LDH64_08750 PF02678 Pirin LDH64_08750 PF05726 Pirin C-terminal cupin domain LDH64_08760 PF01266 FAD dependent oxidoreductase LDH64_08765 PF04293 SpoVR like protein LDH64_08770 PF07840 FadR C-terminal domain LDH64_08770 PF00392 Bacterial regulatory proteins, gntR family LDH64_08775 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LDH64_08780 PF02600 Disulfide bond formation protein DsbB LDH64_08800 PF00266 Aminotransferase class-V LDH64_08810 PF00872 Transposase, Mutator family LDH64_08815 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LDH64_08970 PF00872 Transposase, Mutator family LDH64_09040 PF06530 Phage antitermination protein Q LDH64_09050 PF05772 NinB protein LDH64_09065 PF01695 IstB-like ATP binding protein LDH64_09070 PF02796 Helix-turn-helix domain of resolvase LDH64_09070 PF00665 Integrase core domain LDH64_09075 PF12167 Arm DNA-binding domain LDH64_09075 PF00589 Phage integrase family LDH64_09080 PF03692 Putative zinc- or iron-chelating domain LDH64_09085 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDH64_09090 PF13406 Transglycosylase SLT domain LDH64_09100 PF05166 YcgL domain LDH64_09105 PF03775 Septum formation inhibitor MinC, C-terminal domain LDH64_09105 PF05209 Septum formation inhibitor MinC, N-terminal domain LDH64_09110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDH64_09115 PF03776 Septum formation topological specificity factor MinE LDH64_09120 PF01612 3'-5' exonuclease LDH64_09120 PF00570 HRDC domain LDH64_09125 PF00501 AMP-binding enzyme LDH64_09125 PF13193 AMP-binding enzyme C-terminal domain LDH64_09135 PF03843 Outer membrane lipoprotein Slp family LDH64_09140 PF00814 Glycoprotease family LDH64_09145 PF13307 Helicase C-terminal domain LDH64_09145 PF04851 Type III restriction enzyme, res subunit LDH64_09150 PF01042 Endoribonuclease L-PSP LDH64_09155 PF00893 Small Multidrug Resistance protein LDH64_09160 PF00893 Small Multidrug Resistance protein LDH64_09165 PF01081 KDPG and KHG aldolase LDH64_09170 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LDH64_09170 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LDH64_09175 PF01418 Helix-turn-helix domain, rpiR family LDH64_09175 PF01380 SIS domain LDH64_09180 PF00224 Pyruvate kinase, barrel domain LDH64_09180 PF02887 Pyruvate kinase, alpha/beta domain LDH64_09190 PF03279 Bacterial lipid A biosynthesis acyltransferase LDH64_09195 PF01476 LysM domain LDH64_09195 PF08525 Opacity-associated protein A N-terminal motif LDH64_09195 PF01551 Peptidase family M23 LDH64_09200 PF01297 Zinc-uptake complex component A periplasmic LDH64_09205 PF00005 ABC transporter LDH64_09210 PF00950 ABC 3 transport family LDH64_09215 PF17864 RuvB AAA lid domain LDH64_09215 PF05491 RuvB C-terminal winged helix domain LDH64_09215 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDH64_09220 PF07499 RuvA, C-terminal domain LDH64_09220 PF01330 RuvA N terminal domain LDH64_09235 PF02075 Crossover junction endodeoxyribonuclease RuvC LDH64_09240 PF01709 Transcriptional regulator LDH64_09245 PF00293 NUDIX domain LDH64_09250 PF01336 OB-fold nucleic acid binding domain LDH64_09250 PF00152 tRNA synthetases class II (D, K and N) LDH64_09250 PF02938 GAD domain LDH64_09255 PF01904 Protein of unknown function DUF72 LDH64_09260 PF01124 MAPEG family LDH64_09265 PF13649 Methyltransferase domain LDH64_09270 PF08003 Protein of unknown function (DUF1698) LDH64_09275 PF03932 CutC family LDH64_09280 PF06185 YecM protein LDH64_09285 PF05746 DALR anticodon binding domain LDH64_09285 PF00750 tRNA synthetases class I (R) LDH64_09285 PF03485 Arginyl tRNA synthetase N terminal domain LDH64_09290 PF13332 Hemagglutinin repeat LDH64_09290 PF05860 haemagglutination activity domain LDH64_09295 PF13332 Hemagglutinin repeat LDH64_09295 PF05860 haemagglutination activity domain LDH64_09300 PF08479 POTRA domain, ShlB-type LDH64_09300 PF17287 POTRA domain LDH64_09300 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDH64_09305 PF03023 Lipid II flippase MurJ LDH64_09310 PF04337 Protein of unknown function, DUF480 LDH64_09315 PF13302 Acetyltransferase (GNAT) domain LDH64_09325 PF07273 Protein of unknown function (DUF1439) LDH64_09330 PF02613 Nitrate reductase delta subunit LDH64_09335 PF02811 PHP domain LDH64_09345 PF01325 Iron dependent repressor, N-terminal DNA binding domain LDH64_09345 PF00480 ROK family LDH64_09350 PF03009 Glycerophosphoryl diester phosphodiesterase family LDH64_09365 PF08402 TOBE domain LDH64_09365 PF00005 ABC transporter LDH64_09370 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_09375 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_09385 PF03009 Glycerophosphoryl diester phosphodiesterase family LDH64_09395 PF01740 STAS domain LDH64_09395 PF00916 Sulfate permease family LDH64_09400 PF00793 DAHP synthetase I family LDH64_09405 PF13369 Transglutaminase-like superfamily LDH64_09410 PF04247 Invasion gene expression up-regulator, SirB LDH64_09415 PF17827 PrmC N-terminal domain LDH64_09415 PF13847 Methyltransferase domain LDH64_09420 PF03462 PCRF domain LDH64_09420 PF00472 RF-1 domain LDH64_09425 PF01488 Shikimate / quinate 5-dehydrogenase LDH64_09425 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LDH64_09425 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LDH64_09430 PF03550 Outer membrane lipoprotein LolB LDH64_09435 PF00288 GHMP kinases N terminal domain LDH64_09435 PF08544 GHMP kinases C terminal LDH64_09440 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDH64_09440 PF14572 Phosphoribosyl synthetase-associated domain LDH64_09445 PF10762 Protein of unknown function (DUF2583) LDH64_09450 PF01195 Peptidyl-tRNA hydrolase LDH64_09455 PF06071 Protein of unknown function (DUF933) LDH64_09455 PF01926 50S ribosome-binding GTPase LDH64_09495 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LDH64_09500 PF00072 Response regulator receiver domain LDH64_09500 PF00486 Transcriptional regulatory protein, C terminal LDH64_09505 PF00512 His Kinase A (phospho-acceptor) domain LDH64_09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_09505 PF00672 HAMP domain LDH64_09550 PF08242 Methyltransferase domain LDH64_09570 PF00872 Transposase, Mutator family LDH64_09615 PF01370 NAD dependent epimerase/dehydratase family LDH64_09620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDH64_09620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDH64_09625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDH64_09625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDH64_09635 PF05962 HutD LDH64_09640 PF01979 Amidohydrolase family LDH64_09645 PF00392 Bacterial regulatory proteins, gntR family LDH64_09645 PF07702 UTRA domain LDH64_09650 PF01979 Amidohydrolase family LDH64_09665 PF01695 IstB-like ATP binding protein LDH64_09670 PF00665 Integrase core domain LDH64_09670 PF02796 Helix-turn-helix domain of resolvase LDH64_09680 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LDH64_09685 PF04996 Succinylarginine dihydrolase LDH64_09690 PF00171 Aldehyde dehydrogenase family LDH64_09695 PF04958 Arginine N-succinyltransferase beta subunit LDH64_09700 PF00202 Aminotransferase class-III LDH64_09710 PF00392 Bacterial regulatory proteins, gntR family LDH64_09710 PF00155 Aminotransferase class I and II LDH64_09720 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LDH64_09720 PF07730 Histidine kinase LDH64_09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_09720 PF00672 HAMP domain LDH64_09725 PF01699 Sodium/calcium exchanger protein LDH64_09730 PF02562 PhoH-like protein LDH64_09745 PF13994 PgaD-like protein LDH64_09750 PF00535 Glycosyl transferase family 2 LDH64_09755 PF14883 Hypothetical glycosyl hydrolase family 13 LDH64_09755 PF01522 Polysaccharide deacetylase LDH64_09765 PF00557 Metallopeptidase family M24 LDH64_09770 PF09313 Domain of unknown function (DUF1971) LDH64_09770 PF03848 Tellurite resistance protein TehB LDH64_09780 PF00578 AhpC/TSA family LDH64_09785 PF00005 ABC transporter LDH64_09785 PF02687 FtsX-like permease family LDH64_09785 PF12704 MacB-like periplasmic core domain LDH64_09795 PF00005 ABC transporter LDH64_09795 PF02687 FtsX-like permease family LDH64_09795 PF12704 MacB-like periplasmic core domain LDH64_09805 PF10634 Fe2+ transport protein LDH64_09810 PF03239 Iron permease FTR1 family LDH64_09825 PF04960 Glutaminase LDH64_09835 PF08220 DeoR-like helix-turn-helix domain LDH64_09835 PF00455 DeoR C terminal sensor domain LDH64_09840 PF00324 Amino acid permease LDH64_09845 PF00155 Aminotransferase class I and II LDH64_09850 PF02508 Rnf-Nqr subunit, membrane protein LDH64_09860 PF04909 Amidohydrolase LDH64_09865 PF07690 Major Facilitator Superfamily LDH64_09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_09880 PF03466 LysR substrate binding domain LDH64_09885 PF03328 HpcH/HpaI aldolase/citrate lyase family LDH64_09890 PF01575 MaoC like domain LDH64_09895 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LDH64_09895 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LDH64_09900 PF00196 Bacterial regulatory proteins, luxR family LDH64_09900 PF00072 Response regulator receiver domain LDH64_09905 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_09905 PF00072 Response regulator receiver domain LDH64_09905 PF00989 PAS fold LDH64_09905 PF00512 His Kinase A (phospho-acceptor) domain LDH64_09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_09905 PF01627 Hpt domain LDH64_09915 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_09915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_09920 PF13954 PapC N-terminal domain LDH64_09920 PF13953 PapC C-terminal domain LDH64_09920 PF00577 Outer membrane usher protein LDH64_09930 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_09930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_09940 PF00589 Phage integrase family LDH64_09940 PF13356 Arm DNA-binding domain LDH64_09945 PF00425 chorismate binding enzyme LDH64_09950 PF07690 Major Facilitator Superfamily LDH64_09955 PF00664 ABC transporter transmembrane region LDH64_09955 PF00005 ABC transporter LDH64_09960 PF04954 Siderophore-interacting protein LDH64_09960 PF00005 ABC transporter LDH64_09960 PF00664 ABC transporter transmembrane region LDH64_09960 PF08021 Siderophore-interacting FAD-binding domain LDH64_09970 PF00501 AMP-binding enzyme LDH64_09970 PF00668 Condensation domain LDH64_09970 PF08242 Methyltransferase domain LDH64_09970 PF00550 Phosphopantetheine attachment site LDH64_09975 PF00698 Acyl transferase domain LDH64_09975 PF00668 Condensation domain LDH64_09975 PF16197 Ketoacyl-synthetase C-terminal extension LDH64_09975 PF00109 Beta-ketoacyl synthase, N-terminal domain LDH64_09975 PF02801 Beta-ketoacyl synthase, C-terminal domain LDH64_09975 PF00550 Phosphopantetheine attachment site LDH64_09985 PF00975 Thioesterase domain LDH64_09990 PF00501 AMP-binding enzyme LDH64_09990 PF13193 AMP-binding enzyme C-terminal domain LDH64_09995 PF07715 TonB-dependent Receptor Plug Domain LDH64_09995 PF00593 TonB dependent receptor LDH64_10025 PF01695 IstB-like ATP binding protein LDH64_10030 PF02796 Helix-turn-helix domain of resolvase LDH64_10030 PF00665 Integrase core domain LDH64_10050 PF00005 ABC transporter LDH64_10050 PF08402 TOBE domain LDH64_10055 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_10060 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_10070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDH64_10070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LDH64_10075 PF07702 UTRA domain LDH64_10075 PF00392 Bacterial regulatory proteins, gntR family LDH64_10170 PF14528 LAGLIDADG-like domain LDH64_10170 PF00772 DnaB-like helicase N terminal domain LDH64_10170 PF03796 DnaB-like helicase C terminal domain LDH64_10195 PF01066 CDP-alcohol phosphatidyltransferase LDH64_10200 PF01541 GIY-YIG catalytic domain LDH64_10200 PF02151 UvrB/uvrC motif LDH64_10200 PF08459 UvrC Helix-hairpin-helix N-terminal LDH64_10205 PF00196 Bacterial regulatory proteins, luxR family LDH64_10205 PF00072 Response regulator receiver domain LDH64_10210 PF10769 Protein of unknown function (DUF2594) LDH64_10215 PF06942 GlpM protein LDH64_10225 PF13505 Outer membrane protein beta-barrel domain LDH64_10235 PF00324 Amino acid permease LDH64_10240 PF01344 Kelch motif LDH64_10245 PF03358 NADPH-dependent FMN reductase LDH64_10250 PF04261 Dyp-type peroxidase family LDH64_10255 PF09375 Imelysin LDH64_10255 PF13473 Cupredoxin-like domain LDH64_10260 PF03239 Iron permease FTR1 family LDH64_10265 PF00474 Sodium:solute symporter family LDH64_10275 PF00171 Aldehyde dehydrogenase family LDH64_10275 PF01619 Proline dehydrogenase LDH64_10275 PF14850 DNA-binding domain of Proline dehydrogenase LDH64_10275 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LDH64_10295 PF00005 ABC transporter LDH64_10300 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_10305 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_10310 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_10315 PF02899 Phage integrase, N-terminal SAM-like domain LDH64_10320 PF04542 Sigma-70 region 2 LDH64_10320 PF04539 Sigma-70 region 3 LDH64_10320 PF04545 Sigma-70, region 4 LDH64_10325 PF00700 Bacterial flagellin C-terminal helical region LDH64_10325 PF08884 Flagellin D3 domain LDH64_10325 PF00669 Bacterial flagellin N-terminal helical region LDH64_10330 PF07196 Flagellin hook IN motif LDH64_10330 PF07195 Flagellar hook-associated protein 2 C-terminus LDH64_10330 PF02465 Flagellar hook-associated protein 2 N-terminus LDH64_10335 PF02561 Flagellar protein FliS LDH64_10340 PF05400 Flagellar protein FliT LDH64_10345 PF12833 Helix-turn-helix domain LDH64_10350 PF02743 Cache domain LDH64_10350 PF00211 Adenylate and Guanylate cyclase catalytic domain LDH64_10350 PF00672 HAMP domain LDH64_10355 PF01966 HD domain LDH64_10360 PF00730 HhH-GPD superfamily base excision DNA repair protein LDH64_10380 PF02049 Flagellar hook-basal body complex protein FliE LDH64_10385 PF01514 Secretory protein of YscJ/FliF family LDH64_10385 PF08345 Flagellar M-ring protein C-terminal LDH64_10390 PF14842 FliG N-terminal domain LDH64_10390 PF14841 FliG middle domain LDH64_10390 PF01706 FliG C-terminal domain LDH64_10395 PF02108 Flagellar assembly protein FliH LDH64_10400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDH64_10400 PF18269 T3SS EscN ATPase C-terminal domain LDH64_10405 PF02050 Flagellar FliJ protein LDH64_10410 PF02120 Flagellar hook-length control protein FliK LDH64_10415 PF03748 Flagellar basal body-associated protein FliL LDH64_10420 PF02154 Flagellar motor switch protein FliM LDH64_10420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LDH64_10425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LDH64_10425 PF16973 Flagellar motor switch protein FliN N-terminal LDH64_10430 PF04347 Flagellar biosynthesis protein, FliO LDH64_10435 PF00813 FliP family LDH64_10440 PF01313 Bacterial export proteins, family 3 LDH64_10445 PF01311 Bacterial export proteins, family 1 LDH64_10460 PF00294 pfkB family carbohydrate kinase LDH64_10465 PF02653 Branched-chain amino acid transport system / permease component LDH64_10470 PF00005 ABC transporter LDH64_10475 PF13407 Periplasmic binding protein domain LDH64_10480 PF02653 Branched-chain amino acid transport system / permease component LDH64_10485 PF00596 Class II Aldolase and Adducin N-terminal domain LDH64_10490 PF04198 Putative sugar-binding domain LDH64_10495 PF00669 Bacterial flagellin N-terminal helical region LDH64_10500 PF00460 Flagella basal body rod protein LDH64_10500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_10505 PF10135 Rod binding protein LDH64_10505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDH64_10510 PF02119 Flagellar P-ring protein LDH64_10515 PF02107 Flagellar L-ring protein LDH64_10530 PF07559 Flagellar basal body protein FlaE LDH64_10530 PF00460 Flagella basal body rod protein LDH64_10530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_10535 PF03963 Flagellar hook capping protein - N-terminal region LDH64_10535 PF13860 FlgD Ig-like domain LDH64_10535 PF13861 FlgD Tudor-like domain LDH64_10540 PF00460 Flagella basal body rod protein LDH64_10540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_10545 PF00460 Flagella basal body rod protein LDH64_10550 PF17656 FlgA N-terminal domain LDH64_10550 PF13144 Chaperone for flagella basal body P-ring formation LDH64_10555 PF04316 Anti-sigma-28 factor, FlgM LDH64_10560 PF05130 FlgN protein LDH64_10580 PF06366 Flagellar protein FlhE LDH64_10585 PF00771 FHIPEP family LDH64_10590 PF01312 FlhB HrpN YscU SpaS Family LDH64_10605 PF10709 Protein of unknown function (DUF2511) LDH64_10615 PF04234 CopC domain LDH64_10620 PF00210 Ferritin-like domain LDH64_10625 PF06440 DNA polymerase III, theta subunit LDH64_10630 PF00561 alpha/beta hydrolase fold LDH64_10635 PF00326 Prolyl oligopeptidase family LDH64_10635 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LDH64_10640 PF13995 YebF-like protein LDH64_10645 PF04266 ASCH domain LDH64_10650 PF07130 YebG protein LDH64_10655 PF03880 DbpA RNA binding domain LDH64_10655 PF00270 DEAD/DEAH box helicase LDH64_10655 PF00271 Helicase conserved C-terminal domain LDH64_10660 PF02222 ATP-grasp domain LDH64_10665 PF03701 Uncharacterised protein family (UPF0181) LDH64_10670 PF04715 Anthranilate synthase component I, N terminal region LDH64_10670 PF00425 chorismate binding enzyme LDH64_10675 PF00293 NUDIX domain LDH64_10680 PF03313 Serine dehydratase alpha chain LDH64_10680 PF03315 Serine dehydratase beta chain LDH64_10685 PF01613 Flavin reductase like domain LDH64_10690 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LDH64_10690 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LDH64_10695 PF07690 Major Facilitator Superfamily LDH64_10700 PF03328 HpcH/HpaI aldolase/citrate lyase family LDH64_10705 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDH64_10710 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase LDH64_10715 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LDH64_10720 PF00171 Aldehyde dehydrogenase family LDH64_10725 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDH64_10730 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDH64_10735 PF01047 MarR family LDH64_10745 PF03610 PTS system fructose IIA component LDH64_10745 PF03830 PTS system sorbose subfamily IIB component LDH64_10750 PF03609 PTS system sorbose-specific iic component LDH64_10755 PF03613 PTS system mannose/fructose/sorbose family IID component LDH64_10760 PF06173 Protein of unknown function (DUF986) LDH64_10765 PF02659 Putative manganese efflux pump LDH64_10770 PF07715 TonB-dependent Receptor Plug Domain LDH64_10770 PF00593 TonB dependent receptor LDH64_10775 PF00990 Diguanylate cyclase, GGDEF domain LDH64_10775 PF08447 PAS fold LDH64_10775 PF05231 MASE1 LDH64_10775 PF13426 PAS domain LDH64_10775 PF08448 PAS fold LDH64_10775 PF00563 EAL domain LDH64_10785 PF13847 Methyltransferase domain LDH64_10790 PF02578 Multi-copper polyphenol oxidoreductase laccase LDH64_10795 PF00313 'Cold-shock' DNA-binding domain LDH64_10800 PF10736 Protein of unknown function (DUF2627) LDH64_10805 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP LDH64_10810 PF00324 Amino acid permease LDH64_10825 PF13974 YebO-like protein LDH64_10830 PF13998 MgrB protein LDH64_10835 PF13996 YobH-like protein LDH64_10840 PF10964 Protein of unknown function (DUF2766) LDH64_10845 PF12833 Helix-turn-helix domain LDH64_10855 PF00664 ABC transporter transmembrane region LDH64_10855 PF00005 ABC transporter LDH64_10870 PF06167 Glucose-regulated metallo-peptidase M90 LDH64_10880 PF00356 Bacterial regulatory proteins, lacI family LDH64_10880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDH64_10885 PF01695 IstB-like ATP binding protein LDH64_10890 PF00665 Integrase core domain LDH64_10890 PF02796 Helix-turn-helix domain of resolvase LDH64_10895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDH64_10895 PF00356 Bacterial regulatory proteins, lacI family LDH64_10900 PF00872 Transposase, Mutator family LDH64_10905 PF01306 LacY proton/sugar symporter LDH64_10910 PF16874 Glycosyl hydrolase family 36 C-terminal domain LDH64_10910 PF16875 Glycosyl hydrolase family 36 N-terminal domain LDH64_10920 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LDH64_10920 PF01648 4'-phosphopantetheinyl transferase superfamily LDH64_10925 PF03480 Bacterial extracellular solute-binding protein, family 7 LDH64_10935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LDH64_10940 PF00072 Response regulator receiver domain LDH64_10940 PF00196 Bacterial regulatory proteins, luxR family LDH64_10950 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LDH64_10960 PF01522 Polysaccharide deacetylase LDH64_10970 PF01554 MatE LDH64_10975 PF00764 Arginosuccinate synthase LDH64_10980 PF01070 FMN-dependent dehydrogenase LDH64_10985 PF13378 Enolase C-terminal domain-like LDH64_10985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LDH64_10990 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDH64_11000 PF04134 Protein of unknown function, DUF393 LDH64_11005 PF07690 Major Facilitator Superfamily LDH64_11010 PF09134 Invasin, domain 3 LDH64_11010 PF11924 Inverse autotransporter, beta-domain LDH64_11010 PF02369 Bacterial Ig-like domain (group 1) LDH64_11015 PF00872 Transposase, Mutator family LDH64_11020 PF04363 Protein of unknown function (DUF496) LDH64_11030 PF08411 Exonuclease C-terminal LDH64_11030 PF00929 Exonuclease LDH64_11040 PF13520 Amino acid permease LDH64_11045 PF00465 Iron-containing alcohol dehydrogenase LDH64_11050 PF00005 ABC transporter LDH64_11055 PF00005 ABC transporter LDH64_11060 PF02653 Branched-chain amino acid transport system / permease component LDH64_11070 PF01370 NAD dependent epimerase/dehydratase family LDH64_11080 PF01634 ATP phosphoribosyltransferase LDH64_11080 PF08029 HisG, C-terminal domain LDH64_11085 PF00815 Histidinol dehydrogenase LDH64_11090 PF00155 Aminotransferase class I and II LDH64_11095 PF00475 Imidazoleglycerol-phosphate dehydratase LDH64_11100 PF00117 Glutamine amidotransferase class-I LDH64_11105 PF00977 Histidine biosynthesis protein LDH64_11110 PF00977 Histidine biosynthesis protein LDH64_11115 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LDH64_11115 PF01502 Phosphoribosyl-AMP cyclohydrolase LDH64_11120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDH64_11120 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LDH64_11125 PF00483 Nucleotidyl transferase LDH64_11130 PF00483 Nucleotidyl transferase LDH64_11135 PF04183 IucA / IucC family LDH64_11135 PF06276 Ferric iron reductase FhuF-like transporter LDH64_11140 PF00593 TonB dependent receptor LDH64_11140 PF07715 TonB-dependent Receptor Plug Domain LDH64_11140 PF07660 Secretin and TonB N terminus short domain LDH64_11145 PF01497 Periplasmic binding protein LDH64_11150 PF01032 FecCD transport family LDH64_11155 PF01032 FecCD transport family LDH64_11160 PF00005 ABC transporter LDH64_11165 PF06276 Ferric iron reductase FhuF-like transporter LDH64_11165 PF04183 IucA / IucC family LDH64_11175 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LDH64_11180 PF00282 Pyridoxal-dependent decarboxylase conserved domain LDH64_11185 PF06276 Ferric iron reductase FhuF-like transporter LDH64_11185 PF11575 FhuF 2Fe-2S C-terminal domain LDH64_11190 PF00571 CBS domain LDH64_11190 PF03471 Transporter associated domain LDH64_11190 PF03741 Integral membrane protein TerC family LDH64_11195 PF05170 AsmA family LDH64_11200 PF00692 dUTPase LDH64_11205 PF00485 Phosphoribulokinase / Uridine kinase family LDH64_11210 PF10609 NUBPL iron-transfer P-loop NTPase LDH64_11215 PF09334 tRNA synthetases class I (M) LDH64_11215 PF01588 Putative tRNA binding domain LDH64_11220 PF01797 Transposase IS200 like LDH64_11240 PF07690 Major Facilitator Superfamily LDH64_11245 PF03788 LrgA family LDH64_11250 PF04172 LrgB-like family LDH64_11255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDH64_11255 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LDH64_11260 PF03949 Malic enzyme, NAD binding domain LDH64_11260 PF00390 Malic enzyme, N-terminal domain LDH64_11265 PF02698 DUF218 domain LDH64_11270 PF02653 Branched-chain amino acid transport system / permease component LDH64_11275 PF00005 ABC transporter LDH64_11280 PF13407 Periplasmic binding protein domain LDH64_11285 PF04235 Protein of unknown function (DUF418) LDH64_11290 PF01227 GTP cyclohydrolase I LDH64_11295 PF06779 Uncharacterised MFS-type transporter YbfB LDH64_11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_11300 PF03466 LysR substrate binding domain LDH64_11305 PF08240 Alcohol dehydrogenase GroES-like domain LDH64_11305 PF00107 Zinc-binding dehydrogenase LDH64_11310 PF00756 Putative esterase LDH64_11325 PF13533 Biotin-lipoyl like LDH64_11330 PF00005 ABC transporter LDH64_11340 PF03453 MoeA N-terminal region (domain I and II) LDH64_11340 PF03454 MoeA C-terminal region (domain IV) LDH64_11340 PF00994 Probable molybdopterin binding domain LDH64_11345 PF00899 ThiF family LDH64_11350 PF00872 Transposase, Mutator family LDH64_11360 PF00005 ABC transporter LDH64_11360 PF12848 ABC transporter LDH64_11450 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LDH64_11450 PF13296 Putative type VI secretion system Rhs element Vgr LDH64_11450 PF04717 Type VI secretion system, phage-baseplate injector LDH64_11455 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_11455 PF07724 AAA domain (Cdc48 subfamily) LDH64_11455 PF17871 AAA lid domain LDH64_11455 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_11465 PF00691 OmpA family LDH64_11465 PF05736 OprF membrane domain LDH64_11480 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LDH64_11490 PF00698 Acyl transferase domain LDH64_11495 PF00550 Phosphopantetheine attachment site LDH64_11510 PF00378 Enoyl-CoA hydratase/isomerase LDH64_11520 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LDH64_11520 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LDH64_11530 PF00109 Beta-ketoacyl synthase, N-terminal domain LDH64_11530 PF02801 Beta-ketoacyl synthase, C-terminal domain LDH64_11535 PF07977 FabA-like domain LDH64_11550 PF08031 Berberine and berberine like LDH64_11550 PF01565 FAD binding domain LDH64_11570 PF04358 DsrC like protein LDH64_11575 PF00708 Acylphosphatase LDH64_11580 PF10672 S-adenosylmethionine-dependent methyltransferase LDH64_11580 PF17785 PUA-like domain LDH64_11585 PF08755 Hemimethylated DNA-binding protein YccV like LDH64_11590 PF13380 CoA binding domain LDH64_11595 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LDH64_11600 PF02142 MGS-like domain LDH64_11605 PF12462 DNA helicase IV / RNA helicase N terminal LDH64_11605 PF13361 UvrD-like helicase C-terminal domain LDH64_11605 PF00580 UvrD/REP helicase N-terminal domain LDH64_11610 PF03733 Inner membrane component domain LDH64_11615 PF12805 FUSC-like inner membrane protein yccS LDH64_11620 PF04994 TfoX C-terminal domain LDH64_11620 PF04993 TfoX N-terminal domain LDH64_11625 PF03846 Cell division inhibitor SulA LDH64_11630 PF00691 OmpA family LDH64_11630 PF01389 OmpA-like transmembrane domain LDH64_11635 PF01797 Transposase IS200 like LDH64_11640 PF06303 MatP N-terminal domain LDH64_11640 PF17414 MatP C-terminal ribbon-helix-helix domain LDH64_11645 PF05362 Lon protease (S16) C-terminal proteolytic domain LDH64_11645 PF13654 AAA domain LDH64_11650 PF07977 FabA-like domain LDH64_11665 PF00665 Integrase core domain LDH64_11665 PF02796 Helix-turn-helix domain of resolvase LDH64_11670 PF01695 IstB-like ATP binding protein LDH64_11680 PF01797 Transposase IS200 like LDH64_11685 PF04957 Ribosome modulation factor LDH64_11690 PF03886 ABC-type transport auxiliary lipoprotein component LDH64_11700 PF02470 MlaD protein LDH64_11705 PF04403 Paraquat-inducible protein A LDH64_11710 PF16326 ABC transporter C-terminal domain LDH64_11710 PF12848 ABC transporter LDH64_11710 PF00005 ABC transporter LDH64_11715 PF10672 S-adenosylmethionine-dependent methyltransferase LDH64_11715 PF02926 THUMP domain LDH64_11715 PF01170 Putative RNA methylase family UPF0020 LDH64_11720 PF03473 MOSC domain LDH64_11720 PF03476 MOSC N-terminal beta barrel domain LDH64_11720 PF00111 2Fe-2S iron-sulfur cluster binding domain LDH64_11725 PF07126 Cell-division protein ZapC LDH64_11730 PF01180 Dihydroorotate dehydrogenase LDH64_11735 PF01433 Peptidase family M1 domain LDH64_11735 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LDH64_11735 PF11940 Domain of unknown function (DUF3458) Ig-like fold LDH64_11740 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LDH64_11740 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LDH64_11745 PF01336 OB-fold nucleic acid binding domain LDH64_11745 PF00152 tRNA synthetases class II (D, K and N) LDH64_11750 PF00267 Gram-negative porin LDH64_11755 PF00155 Aminotransferase class I and II LDH64_11765 PF00753 Metallo-beta-lactamase superfamily LDH64_11770 PF05951 Bacterial protein of unknown function (DUF882) LDH64_11775 PF01471 Putative peptidoglycan binding domain LDH64_11775 PF03734 L,D-transpeptidase catalytic domain LDH64_11785 PF04310 MukB N-terminal LDH64_11785 PF16330 MukB hinge domain LDH64_11790 PF04288 MukE-like family LDH64_11795 PF17192 MukF middle domain LDH64_11795 PF03882 MukF winged-helix domain LDH64_11795 PF17193 MukF C-terminal domain LDH64_11800 PF13847 Methyltransferase domain LDH64_11805 PF01636 Phosphotransferase enzyme family LDH64_11810 PF02348 Cytidylyltransferase LDH64_11815 PF03966 Trm112p-like protein LDH64_11820 PF00313 'Cold-shock' DNA-binding domain LDH64_11825 PF07063 Domain of unknown function (DUF1338) LDH64_11830 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LDH64_11835 PF00664 ABC transporter transmembrane region LDH64_11835 PF00005 ABC transporter LDH64_11840 PF03772 Competence protein LDH64_11840 PF00753 Metallo-beta-lactamase superfamily LDH64_11845 PF00216 Bacterial DNA-binding protein LDH64_11850 PF00575 S1 RNA binding domain LDH64_11855 PF02224 Cytidylate kinase LDH64_11860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDH64_11865 PF00266 Aminotransferase class-V LDH64_11875 PF13018 Extended Signal Peptide of Type V secretion system LDH64_11875 PF03895 YadA-like membrane anchor domain LDH64_11875 PF05658 Head domain of trimeric autotransporter adhesin LDH64_11875 PF05662 Coiled stalk of trimeric autotransporter adhesin LDH64_11875 PF13018 Extended Signal Peptide of Type V secretion system LDH64_11875 PF03895 YadA-like membrane anchor domain LDH64_11875 PF05662 Coiled stalk of trimeric autotransporter adhesin LDH64_11875 PF05658 Head domain of trimeric autotransporter adhesin LDH64_11880 PF00710 Asparaginase, N-terminal LDH64_11880 PF17763 Glutaminase/Asparaginase C-terminal domain LDH64_11885 PF18381 YcaO cyclodehydratase C-terminal domain LDH64_11885 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LDH64_11890 PF01226 Formate/nitrite transporter LDH64_11895 PF01228 Glycine radical LDH64_11895 PF02901 Pyruvate formate lyase-like LDH64_11905 PF04055 Radical SAM superfamily LDH64_11910 PF07690 Major Facilitator Superfamily LDH64_11915 PF02403 Seryl-tRNA synthetase N-terminal domain LDH64_11915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDH64_11920 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_11920 PF16193 AAA C-terminal domain LDH64_11920 PF12002 MgsA AAA+ ATPase C terminal LDH64_11925 PF03548 Outer membrane lipoprotein carrier protein LolA LDH64_11930 PF17854 FtsK alpha domain LDH64_11930 PF01580 FtsK/SpoIIIE family LDH64_11930 PF09397 Ftsk gamma domain LDH64_11930 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LDH64_11935 PF01037 Lrp/AsnC ligand binding domain LDH64_11940 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_11945 PF00664 ABC transporter transmembrane region LDH64_11945 PF00005 ABC transporter LDH64_11950 PF00664 ABC transporter transmembrane region LDH64_11950 PF00005 ABC transporter LDH64_11955 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LDH64_11960 PF01176 Translation initiation factor 1A / IF-1 LDH64_11970 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_11970 PF07724 AAA domain (Cdc48 subfamily) LDH64_11970 PF02861 Clp amino terminal domain, pathogenicity island component LDH64_11970 PF17871 AAA lid domain LDH64_11970 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_11975 PF02617 ATP-dependent Clp protease adaptor protein ClpS LDH64_11980 PF00313 'Cold-shock' DNA-binding domain LDH64_11985 PF00005 ABC transporter LDH64_11985 PF02687 FtsX-like permease family LDH64_11985 PF12704 MacB-like periplasmic core domain LDH64_11990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_11995 PF04393 Protein of unknown function (DUF535) LDH64_12000 PF11398 Protein of unknown function (DUF2813) LDH64_12005 PF03956 Lysine exporter LysO LDH64_12010 PF03063 Prismane/CO dehydrogenase family LDH64_12015 PF00970 Oxidoreductase FAD-binding domain LDH64_12015 PF00111 2Fe-2S iron-sulfur cluster binding domain LDH64_12015 PF00175 Oxidoreductase NAD-binding domain LDH64_12020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDH64_12020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDH64_12020 PF00205 Thiamine pyrophosphate enzyme, central domain LDH64_12025 PF01212 Beta-eliminating lyase LDH64_12030 PF13460 NAD(P)H-binding LDH64_12030 PF11066 Protein of unknown function (DUF2867) LDH64_12035 PF01370 NAD dependent epimerase/dehydratase family LDH64_12040 PF12883 Protein of unknown function (DUF3828) LDH64_12045 PF01817 Chorismate mutase type II LDH64_12050 PF00005 ABC transporter LDH64_12055 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_12060 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12065 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12075 PF00892 EamA-like transporter family LDH64_12080 PF10100 Staphylopine dehydrogenase LDH64_12085 PF03059 Nicotianamine synthase protein LDH64_12090 PF00005 ABC transporter LDH64_12120 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_12125 PF05958 tRNA (Uracil-5-)-methyltransferase LDH64_12130 PF10767 Protein of unknown function (DUF2593) LDH64_12135 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12140 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12145 PF00005 ABC transporter LDH64_12145 PF08402 TOBE domain LDH64_12150 PF13416 Bacterial extracellular solute-binding protein LDH64_12155 PF10722 Putative bacterial sensory transduction regulator LDH64_12160 PF07214 Protein of unknown function (DUF1418) LDH64_12165 PF00462 Glutaredoxin LDH64_12170 PF02080 TrkA-C domain LDH64_12170 PF06826 Predicted Permease Membrane Region LDH64_12180 PF01569 PAP2 superfamily LDH64_12185 PF01791 DeoC/LacD family aldolase LDH64_12190 PF08220 DeoR-like helix-turn-helix domain LDH64_12190 PF00455 DeoR C terminal sensor domain LDH64_12200 PF00768 D-alanyl-D-alanine carboxypeptidase LDH64_12200 PF07943 Penicillin-binding protein 5, C-terminal domain LDH64_12205 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12210 PF00005 ABC transporter LDH64_12210 PF09383 NIL domain LDH64_12215 PF03180 NLPA lipoprotein LDH64_12230 PF00043 Glutathione S-transferase, C-terminal domain LDH64_12230 PF13417 Glutathione S-transferase, N-terminal domain LDH64_12235 PF07715 TonB-dependent Receptor Plug Domain LDH64_12235 PF00593 TonB dependent receptor LDH64_12240 PF00005 ABC transporter LDH64_12245 PF01032 FecCD transport family LDH64_12255 PF00324 Amino acid permease LDH64_12260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_12260 PF03466 LysR substrate binding domain LDH64_12265 PF03601 Conserved hypothetical protein 698 LDH64_12270 PF01261 Xylose isomerase-like TIM barrel LDH64_12275 PF13954 PapC N-terminal domain LDH64_12275 PF00577 Outer membrane usher protein LDH64_12275 PF13953 PapC C-terminal domain LDH64_12280 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_12280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_12290 PF17550 Family of unknown function LDH64_12295 PF00486 Transcriptional regulatory protein, C terminal LDH64_12300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDH64_12300 PF02378 Phosphotransferase system, EIIC LDH64_12305 PF00294 pfkB family carbohydrate kinase LDH64_12310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDH64_12310 PF00381 PTS HPr component phosphorylation site LDH64_12315 PF00293 NUDIX domain LDH64_12320 PF02653 Branched-chain amino acid transport system / permease component LDH64_12325 PF00005 ABC transporter LDH64_12335 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDH64_12340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_12340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_12345 PF00171 Aldehyde dehydrogenase family LDH64_12355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDH64_12355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDH64_12355 PF01842 ACT domain LDH64_12365 PF03692 Putative zinc- or iron-chelating domain LDH64_12370 PF03222 Tryptophan/tyrosine permease family LDH64_12375 PF01132 Elongation factor P (EF-P) OB domain LDH64_12375 PF08207 Elongation factor P (EF-P) KOW-like domain LDH64_12375 PF09285 Elongation factor P, C-terminal LDH64_12380 PF03786 D-mannonate dehydratase (UxuA) LDH64_12385 PF01232 Mannitol dehydrogenase Rossmann domain LDH64_12385 PF08125 Mannitol dehydrogenase C-terminal domain LDH64_12390 PF00392 Bacterial regulatory proteins, gntR family LDH64_12390 PF07729 FCD domain LDH64_12395 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDH64_12395 PF07683 Cobalamin synthesis protein cobW C-terminal domain LDH64_12400 PF01569 PAP2 superfamily LDH64_12405 PF00877 NlpC/P60 family LDH64_12410 PF12792 CSS motif domain associated with EAL LDH64_12410 PF00563 EAL domain LDH64_12415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_12420 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12425 PF12911 N-terminal TM domain of oligopeptide transport permease C LDH64_12425 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12430 PF00005 ABC transporter LDH64_12430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_12435 PF13989 YejG-like protein LDH64_12440 PF07690 Major Facilitator Superfamily LDH64_12445 PF00849 RNA pseudouridylate synthase LDH64_12445 PF01479 S4 domain LDH64_12450 PF00271 Helicase conserved C-terminal domain LDH64_12450 PF04851 Type III restriction enzyme, res subunit LDH64_12455 PF01386 Ribosomal L25p family LDH64_12460 PF01797 Transposase IS200 like LDH64_12465 PF04245 37-kD nucleoid-associated bacterial protein LDH64_12470 PF07208 Protein of unknown function (DUF1414) LDH64_12475 PF11893 Domain of unknown function (DUF3413) LDH64_12475 PF00884 Sulfatase LDH64_12490 PF05638 Type VI secretion system effector, Hcp LDH64_12510 PF00232 Glycosyl hydrolase family 1 LDH64_12515 PF01418 Helix-turn-helix domain, rpiR family LDH64_12515 PF01380 SIS domain LDH64_12520 PF07484 Phage Tail Collar Domain LDH64_12530 PF04865 Baseplate J-like protein LDH64_12570 PF04984 Phage tail sheath protein subtilisin-like domain LDH64_12570 PF17482 Phage tail sheath C-terminal domain LDH64_12590 PF01261 Xylose isomerase-like TIM barrel LDH64_12595 PF00455 DeoR C terminal sensor domain LDH64_12595 PF08220 DeoR-like helix-turn-helix domain LDH64_12605 PF17042 Nucleotide-binding C-terminal domain LDH64_12605 PF07005 Sugar-binding N-terminal domain LDH64_12610 PF06530 Phage antitermination protein Q LDH64_12615 PF00717 Peptidase S24-like LDH64_12615 PF01381 Helix-turn-helix LDH64_12620 PF06183 DinI-like family LDH64_12625 PF01278 Omptin family LDH64_12630 PF00672 HAMP domain LDH64_12630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDH64_12630 PF02743 Cache domain LDH64_12635 PF12706 Beta-lactamase superfamily domain LDH64_12645 PF00144 Beta-lactamase LDH64_12665 PF00267 Gram-negative porin LDH64_12670 PF07690 Major Facilitator Superfamily LDH64_12675 PF01627 Hpt domain LDH64_12675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_12675 PF16359 RcsD-ABL domain LDH64_12680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_12680 PF01627 Hpt domain LDH64_12680 PF16359 RcsD-ABL domain LDH64_12685 PF00196 Bacterial regulatory proteins, luxR family LDH64_12685 PF00072 Response regulator receiver domain LDH64_12690 PF09456 RcsC Alpha-Beta-Loop (ABL) LDH64_12690 PF00072 Response regulator receiver domain LDH64_12690 PF00512 His Kinase A (phospho-acceptor) domain LDH64_12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_12695 PF03989 DNA gyrase C-terminal domain, beta-propeller LDH64_12695 PF00521 DNA gyrase/topoisomerase IV, subunit A LDH64_12705 PF03477 ATP cone domain LDH64_12705 PF02867 Ribonucleotide reductase, barrel domain LDH64_12705 PF00317 Ribonucleotide reductase, all-alpha domain LDH64_12710 PF00268 Ribonucleotide reductase, small chain LDH64_12715 PF00111 2Fe-2S iron-sulfur cluster binding domain LDH64_12720 PF03974 Ecotin LDH64_12725 PF00994 Probable molybdopterin binding domain LDH64_12730 PF03222 Tryptophan/tyrosine permease family LDH64_12735 PF07437 YfaZ precursor LDH64_12740 PF06628 Catalase-related immune-responsive LDH64_12740 PF00199 Catalase LDH64_12745 PF06733 DEAD_2 LDH64_12745 PF13307 Helicase C-terminal domain LDH64_12750 PF00267 Gram-negative porin LDH64_12755 PF00892 EamA-like transporter family LDH64_12765 PF01276 Orn/Lys/Arg decarboxylase, major domain LDH64_12765 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LDH64_12765 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LDH64_12770 PF13520 Amino acid permease LDH64_12775 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12780 PF00005 ABC transporter LDH64_12785 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12795 PF00581 Rhodanese-like domain LDH64_12810 PF00005 ABC transporter LDH64_12815 PF00005 ABC transporter LDH64_12820 PF02653 Branched-chain amino acid transport system / permease component LDH64_12825 PF02653 Branched-chain amino acid transport system / permease component LDH64_12830 PF02954 Bacterial regulatory protein, Fis family LDH64_12830 PF13188 PAS domain LDH64_12830 PF00158 Sigma-54 interaction domain LDH64_12835 PF07308 Protein of unknown function (DUF1456) LDH64_12840 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12845 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_12855 PF00005 ABC transporter LDH64_12860 PF04226 Transglycosylase associated protein LDH64_12870 PF01844 HNH endonuclease LDH64_12875 PF01928 CYTH domain LDH64_12880 PF09330 D-lactate dehydrogenase, membrane binding LDH64_12880 PF01565 FAD binding domain LDH64_12885 PF00768 D-alanyl-D-alanine carboxypeptidase LDH64_12895 PF01207 Dihydrouridine synthase (Dus) LDH64_12920 PF00872 Transposase, Mutator family LDH64_12955 PF00270 DEAD/DEAH box helicase LDH64_12955 PF00271 Helicase conserved C-terminal domain LDH64_12960 PF09209 Tetracyclin repressor-like, C-terminal domain LDH64_12960 PF00440 Bacterial regulatory proteins, tetR family LDH64_12965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_12970 PF00005 ABC transporter LDH64_12995 PF03466 LysR substrate binding domain LDH64_12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_13000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDH64_13005 PF00158 Sigma-54 interaction domain LDH64_13005 PF02954 Bacterial regulatory protein, Fis family LDH64_13005 PF00072 Response regulator receiver domain LDH64_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_13010 PF00512 His Kinase A (phospho-acceptor) domain LDH64_13015 PF13801 Heavy-metal resistance LDH64_13035 PF01048 Phosphorylase superfamily LDH64_13045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_13045 PF03466 LysR substrate binding domain LDH64_13050 PF02028 BCCT, betaine/carnitine/choline family transporter LDH64_13055 PF00440 Bacterial regulatory proteins, tetR family LDH64_13055 PF13977 BetI-type transcriptional repressor, C-terminal LDH64_13060 PF00171 Aldehyde dehydrogenase family LDH64_13065 PF05199 GMC oxidoreductase LDH64_13065 PF00732 GMC oxidoreductase LDH64_13070 PF01797 Transposase IS200 like LDH64_13075 PF01027 Inhibitor of apoptosis-promoting Bax1 LDH64_13080 PF02391 MoaE protein LDH64_13085 PF02597 ThiS family LDH64_13090 PF01967 MoaC family LDH64_13095 PF06463 Molybdenum Cofactor Synthesis C LDH64_13095 PF04055 Radical SAM superfamily LDH64_13100 PF01933 Uncharacterised protein family UPF0052 LDH64_13105 PF09905 DNA-binding protein VF530 LDH64_13110 PF00271 Helicase conserved C-terminal domain LDH64_13110 PF04851 Type III restriction enzyme, res subunit LDH64_13110 PF02151 UvrB/uvrC motif LDH64_13110 PF12344 Ultra-violet resistance protein B LDH64_13110 PF17757 UvrB interaction domain LDH64_13115 PF09383 NIL domain LDH64_13115 PF00005 ABC transporter LDH64_13125 PF08241 Methyltransferase domain LDH64_13130 PF00155 Aminotransferase class I and II LDH64_13135 PF06968 Biotin and Thiamin Synthesis associated domain LDH64_13135 PF04055 Radical SAM superfamily LDH64_13140 PF00202 Aminotransferase class-III LDH64_13145 PF10282 Lactonase, 7-bladed beta-propeller LDH64_13155 PF03459 TOBE domain LDH64_13155 PF00005 ABC transporter LDH64_13160 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_13170 PF10766 Multidrug efflux pump-associated protein AcrZ LDH64_13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_13175 PF03459 TOBE domain LDH64_13180 PF00005 ABC transporter LDH64_13190 PF16363 GDP-mannose 4,6 dehydratase LDH64_13195 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LDH64_13195 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LDH64_13200 PF10509 Galactokinase galactose-binding signature LDH64_13200 PF08544 GHMP kinases C terminal LDH64_13200 PF00288 GHMP kinases N terminal domain LDH64_13210 PF01263 Aldose 1-epimerase LDH64_13220 PF00300 Histidine phosphatase superfamily (branch 1) LDH64_13225 PF00793 DAHP synthetase I family LDH64_13230 PF01545 Cation efflux family LDH64_13235 PF04973 Nicotinamide mononucleotide transporter LDH64_13240 PF02445 Quinolinate synthetase A protein LDH64_13260 PF16331 TolA binding protein trimerisation LDH64_13260 PF13174 Tetratricopeptide repeat LDH64_13265 PF00691 OmpA family LDH64_13270 PF07676 WD40-like Beta Propeller Repeat LDH64_13270 PF04052 TolB amino-terminal domain LDH64_13275 PF06519 TolA C-terminal LDH64_13275 PF06519 TolA C-terminal LDH64_13280 PF02472 Biopolymer transport protein ExbD/TolR LDH64_13285 PF01618 MotA/TolQ/ExbB proton channel family LDH64_13290 PF03061 Thioesterase superfamily LDH64_13295 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) LDH64_13300 PF08173 Membrane bound YbgT-like protein LDH64_13305 PF02322 Cytochrome bd terminal oxidase subunit II LDH64_13310 PF01654 Cytochrome bd terminal oxidase subunit I LDH64_13315 PF02629 CoA binding domain LDH64_13315 PF00549 CoA-ligase LDH64_13320 PF08442 ATP-grasp domain LDH64_13320 PF00549 CoA-ligase LDH64_13325 PF00364 Biotin-requiring enzyme LDH64_13325 PF02817 e3 binding domain LDH64_13325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDH64_13330 PF02779 Transketolase, pyrimidine binding domain LDH64_13330 PF16870 2-oxoglutarate dehydrogenase C-terminal LDH64_13330 PF16078 2-oxoglutarate dehydrogenase N-terminus LDH64_13330 PF00676 Dehydrogenase E1 component LDH64_13335 PF13085 2Fe-2S iron-sulfur cluster binding domain LDH64_13340 PF02910 Fumarate reductase flavoprotein C-term LDH64_13340 PF00890 FAD binding domain LDH64_13345 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDH64_13350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDH64_13355 PF00285 Citrate synthase, C-terminal domain LDH64_13360 PF01025 GrpE LDH64_13365 PF01513 ATP-NAD kinase LDH64_13370 PF02463 RecF/RecN/SMC N terminal domain LDH64_13375 PF04355 SmpA / OmlA family LDH64_13380 PF03658 RnfH family Ubiquitin LDH64_13385 PF03364 Polyketide cyclase / dehydrase and lipid transport LDH64_13390 PF01668 SmpB protein LDH64_13405 PF00589 Phage integrase family LDH64_13405 PF13356 Arm DNA-binding domain LDH64_13465 PF05973 Phage derived protein Gp49-like (DUF891) LDH64_13475 PF00665 Integrase core domain LDH64_13475 PF02796 Helix-turn-helix domain of resolvase LDH64_13480 PF01695 IstB-like ATP binding protein LDH64_13490 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LDH64_13500 PF00929 Exonuclease LDH64_13505 PF00075 RNase H LDH64_13510 PF08241 Methyltransferase domain LDH64_13515 PF16123 Hydroxyacylglutathione hydrolase C-terminus LDH64_13515 PF00753 Metallo-beta-lactamase superfamily LDH64_13520 PF01476 LysM domain LDH64_13520 PF01464 Transglycosylase SLT domain LDH64_13525 PF03372 Endonuclease/Exonuclease/phosphatase family LDH64_13535 PF00248 Aldo/keto reductase family LDH64_13570 PF00005 ABC transporter LDH64_13570 PF09383 NIL domain LDH64_13575 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_13580 PF03180 NLPA lipoprotein LDH64_13585 PF16358 RcsF lipoprotein LDH64_13590 PF01980 tRNA-methyltransferase O LDH64_13590 PF18389 TrmO C-terminal domain LDH64_13595 PF03129 Anticodon binding domain LDH64_13595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDH64_13595 PF04073 Aminoacyl-tRNA editing domain LDH64_13600 PF04170 NlpE N-terminal domain LDH64_13600 PF17185 NlpE C-terminal OB domain LDH64_13605 PF00472 RF-1 domain LDH64_13610 PF07152 YaeQ protein LDH64_13615 PF06786 Uncharacterised protein family (UPF0253) LDH64_13620 PF07073 Modulator of Rho-dependent transcription termination (ROF) LDH64_13625 PF00034 Cytochrome c LDH64_13630 PF01171 PP-loop family LDH64_13630 PF09179 TilS substrate binding domain LDH64_13630 PF11734 TilS substrate C-terminal domain LDH64_13635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDH64_13640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LDH64_13645 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDH64_13645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDH64_13645 PF14579 Helix-hairpin-helix motif LDH64_13645 PF02811 PHP domain LDH64_13645 PF01336 OB-fold nucleic acid binding domain LDH64_13650 PF01351 Ribonuclease HII LDH64_13655 PF02684 Lipid-A-disaccharide synthetase LDH64_13660 PF00132 Bacterial transferase hexapeptide (six repeats) LDH64_13660 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LDH64_13665 PF07977 FabA-like domain LDH64_13670 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LDH64_13670 PF00132 Bacterial transferase hexapeptide (six repeats) LDH64_13675 PF03938 Outer membrane protein (OmpH-like) LDH64_13680 PF01103 Surface antigen LDH64_13680 PF07244 Surface antigen variable number repeat LDH64_13685 PF17820 PDZ domain LDH64_13685 PF02163 Peptidase family M50 LDH64_13695 PF01255 Putative undecaprenyl diphosphate synthase LDH64_13700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LDH64_13700 PF13288 DXP reductoisomerase C-terminal domain LDH64_13700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LDH64_13705 PF01765 Ribosome recycling factor LDH64_13710 PF00696 Amino acid kinase family LDH64_13715 PF00889 Elongation factor TS LDH64_13720 PF00318 Ribosomal protein S2 LDH64_13725 PF00557 Metallopeptidase family M24 LDH64_13730 PF01909 Nucleotidyltransferase domain LDH64_13730 PF01966 HD domain LDH64_13730 PF01842 ACT domain LDH64_13730 PF08335 GlnD PII-uridylyltransferase LDH64_13735 PF14602 Hexapeptide repeat of succinyl-transferase LDH64_13735 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LDH64_13735 PF00132 Bacterial transferase hexapeptide (six repeats) LDH64_13740 PF11944 Protein of unknown function (DUF3461) LDH64_13745 PF00258 Flavodoxin LDH64_13750 PF00849 RNA pseudouridylate synthase LDH64_13755 PF04287 tRNA pseudouridine synthase C LDH64_13760 PF01797 Transposase IS200 like LDH64_13765 PF07348 Syd protein (SUKH-2) LDH64_13770 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LDH64_13770 PF14489 QueF-like protein LDH64_13775 PF03641 Possible lysine decarboxylase LDH64_13775 PF11892 Domain of unknown function (DUF3412) LDH64_13775 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LDH64_13780 PF01367 5'-3' exonuclease, C-terminal SAM fold LDH64_13780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDH64_13785 PF01728 FtsJ-like methyltransferase LDH64_13785 PF18125 RlmM ferredoxin-like domain LDH64_13790 PF04241 Protein of unknown function (DUF423) LDH64_13795 PF03466 LysR substrate binding domain LDH64_13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_13805 PF00266 Aminotransferase class-V LDH64_13810 PF02657 Fe-S metabolism associated domain LDH64_13815 PF00899 ThiF family LDH64_13820 PF06725 3D domain LDH64_13820 PF03562 MltA specific insert domain LDH64_13835 PF11741 AMIN domain LDH64_13835 PF01520 N-acetylmuramoyl-L-alanine amidase LDH64_13840 PF00696 Amino acid kinase family LDH64_13840 PF00583 Acetyltransferase (GNAT) family LDH64_13845 PF13538 UvrD-like helicase C-terminal domain LDH64_13850 PF12705 PD-(D/E)XK nuclease superfamily LDH64_13850 PF00580 UvrD/REP helicase N-terminal domain LDH64_13850 PF13361 UvrD-like helicase C-terminal domain LDH64_13855 PF00675 Insulinase (Peptidase family M16) LDH64_13855 PF05193 Peptidase M16 inactive domain LDH64_13855 PF16187 Middle or third domain of peptidase_M16 LDH64_13860 PF17946 RecC C-terminal domain LDH64_13885 PF00303 Thymidylate synthase LDH64_13890 PF01790 Prolipoprotein diacylglyceryl transferase LDH64_13895 PF01590 GAF domain LDH64_13895 PF05524 PEP-utilising enzyme, N-terminal LDH64_13895 PF00391 PEP-utilising enzyme, mobile domain LDH64_13895 PF02896 PEP-utilising enzyme, TIM barrel domain LDH64_13900 PF00293 NUDIX domain LDH64_13905 PF02976 DNA mismatch repair enzyme MutH LDH64_13910 PF00248 Aldo/keto reductase family LDH64_13925 PF07690 Major Facilitator Superfamily LDH64_13930 PF01553 Acyltransferase LDH64_13930 PF00501 AMP-binding enzyme LDH64_13930 PF13193 AMP-binding enzyme C-terminal domain LDH64_13935 PF01568 Molydopterin dinucleotide binding domain LDH64_13935 PF00384 Molybdopterin oxidoreductase LDH64_13940 PF00356 Bacterial regulatory proteins, lacI family LDH64_13945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDH64_13945 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDH64_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_13950 PF03466 LysR substrate binding domain LDH64_13955 PF07690 Major Facilitator Superfamily LDH64_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_13960 PF03466 LysR substrate binding domain LDH64_13975 PF00672 HAMP domain LDH64_13975 PF02203 Tar ligand binding domain homologue LDH64_13975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDH64_13990 PF00872 Transposase, Mutator family LDH64_14005 PF01478 Type IV leader peptidase family LDH64_14005 PF06750 Bacterial Peptidase A24 N-terminal domain LDH64_14025 PF07963 Prokaryotic N-terminal methylation motif LDH64_14025 PF11612 Type II secretion system (T2SS), protein J LDH64_14030 PF07963 Prokaryotic N-terminal methylation motif LDH64_14030 PF02501 Type II secretion system (T2SS), protein I LDH64_14045 PF07963 Prokaryotic N-terminal methylation motif LDH64_14045 PF08334 Type II secretion system (T2SS), protein G LDH64_14050 PF00482 Type II secretion system (T2SS), protein F LDH64_14055 PF00437 Type II/IV secretion system protein LDH64_14060 PF03958 Bacterial type II/III secretion system short domain LDH64_14060 PF00263 Bacterial type II and III secretion system protein LDH64_14075 PF00484 Carbonic anhydrase LDH64_14095 PF02278 Polysaccharide lyase family 8, super-sandwich domain LDH64_14095 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LDH64_14095 PF09093 Lyase, catalytic LDH64_14095 PF09092 Lyase, N terminal LDH64_14100 PF01695 IstB-like ATP binding protein LDH64_14105 PF02796 Helix-turn-helix domain of resolvase LDH64_14105 PF00665 Integrase core domain LDH64_14110 PF01797 Transposase IS200 like LDH64_14120 PF00884 Sulfatase LDH64_14125 PF08220 DeoR-like helix-turn-helix domain LDH64_14125 PF00455 DeoR C terminal sensor domain LDH64_14130 PF08013 Tagatose 6 phosphate kinase LDH64_14135 PF01380 SIS domain LDH64_14140 PF03830 PTS system sorbose subfamily IIB component LDH64_14145 PF03609 PTS system sorbose-specific iic component LDH64_14150 PF03613 PTS system mannose/fructose/sorbose family IID component LDH64_14155 PF03610 PTS system fructose IIA component LDH64_14160 PF01979 Amidohydrolase family LDH64_14170 PF07470 Glycosyl Hydrolase Family 88 LDH64_14175 PF04055 Radical SAM superfamily LDH64_14175 PF13186 Iron-sulfur cluster-binding domain LDH64_14180 PF00884 Sulfatase LDH64_14190 PF01116 Fructose-bisphosphate aldolase class-II LDH64_14200 PF00356 Bacterial regulatory proteins, lacI family LDH64_14205 PF07690 Major Facilitator Superfamily LDH64_14210 PF13802 Galactose mutarotase-like LDH64_14210 PF01055 Glycosyl hydrolases family 31 LDH64_14210 PF16338 Domain of unknown function (DUF4968) LDH64_14210 PF17137 Domain of unknown function (DUF5110) LDH64_14215 PF00356 Bacterial regulatory proteins, lacI family LDH64_14220 PF02264 LamB porin LDH64_14225 PF00367 phosphotransferase system, EIIB LDH64_14225 PF02378 Phosphotransferase system, EIIC LDH64_14230 PF02449 Beta-galactosidase LDH64_14230 PF08533 Beta-galactosidase C-terminal domain LDH64_14230 PF08532 Beta-galactosidase trimerisation domain LDH64_14235 PF07745 Glycosyl hydrolase family 53 LDH64_14240 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_14245 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_14250 PF13416 Bacterial extracellular solute-binding protein LDH64_14255 PF00005 ABC transporter LDH64_14255 PF17912 MalK OB fold domain LDH64_14260 PF00005 ABC transporter LDH64_14265 PF02653 Branched-chain amino acid transport system / permease component LDH64_14270 PF13407 Periplasmic binding protein domain LDH64_14280 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LDH64_14290 PF03551 Transcriptional regulator PadR-like family LDH64_14380 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA LDH64_14385 PF15723 Motility quorum-sensing regulator, toxin of MqsA LDH64_14405 PF13356 Arm DNA-binding domain LDH64_14405 PF14659 Phage integrase, N-terminal SAM-like domain LDH64_14405 PF00589 Phage integrase family LDH64_14415 PF00152 tRNA synthetases class II (D, K and N) LDH64_14415 PF01336 OB-fold nucleic acid binding domain LDH64_14425 PF01368 DHH family LDH64_14425 PF17768 RecJ OB domain LDH64_14425 PF02272 DHHA1 domain LDH64_14430 PF13098 Thioredoxin-like domain LDH64_14430 PF10411 Disulfide bond isomerase protein N-terminus LDH64_14435 PF00589 Phage integrase family LDH64_14435 PF02899 Phage integrase, N-terminal SAM-like domain LDH64_14440 PF00258 Flavodoxin LDH64_14445 PF06123 Inner membrane protein CreD LDH64_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_14450 PF00672 HAMP domain LDH64_14450 PF00512 His Kinase A (phospho-acceptor) domain LDH64_14455 PF00072 Response regulator receiver domain LDH64_14455 PF00486 Transcriptional regulatory protein, C terminal LDH64_14460 PF07254 Membrane-bound toxin component of toxin-antitoxin system LDH64_14465 PF03937 Flavinator of succinate dehydrogenase LDH64_14470 PF01571 Aminomethyltransferase folate-binding domain LDH64_14480 PF03006 Haemolysin-III related LDH64_14510 PF02347 Glycine cleavage system P-protein LDH64_14515 PF01597 Glycine cleavage H-protein LDH64_14520 PF01571 Aminomethyltransferase folate-binding domain LDH64_14520 PF08669 Glycine cleavage T-protein C-terminal barrel domain LDH64_14525 PF01494 FAD binding domain LDH64_14530 PF01494 FAD binding domain LDH64_14535 PF05195 Aminopeptidase P, N-terminal domain LDH64_14535 PF00557 Metallopeptidase family M24 LDH64_14540 PF03695 Uncharacterised protein family (UPF0149) LDH64_14545 PF05164 Cell division protein ZapA LDH64_14555 PF01812 5-formyltetrahydrofolate cyclo-ligase family LDH64_14565 PF01842 ACT domain LDH64_14565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDH64_14565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDH64_14570 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDH64_14575 PF03466 LysR substrate binding domain LDH64_14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_14580 PF04402 Protein of unknown function (DUF541) LDH64_14585 PF01810 LysE type translocator LDH64_14590 PF00924 Mechanosensitive ion channel LDH64_14590 PF05552 Conserved TM helix LDH64_14600 PF01116 Fructose-bisphosphate aldolase class-II LDH64_14605 PF00162 Phosphoglycerate kinase LDH64_14610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDH64_14610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDH64_14620 PF02780 Transketolase, C-terminal domain LDH64_14620 PF02779 Transketolase, pyrimidine binding domain LDH64_14620 PF00456 Transketolase, thiamine diphosphate binding domain LDH64_14625 PF01435 Peptidase family M48 LDH64_14630 PF00355 Rieske [2Fe-2S] domain LDH64_14635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDH64_14635 PF17944 Arginine decarboxylase C-terminal helical extension LDH64_14635 PF17810 Arginine decarboxylase helical bundle domain LDH64_14640 PF02772 S-adenosylmethionine synthetase, central domain LDH64_14640 PF00438 S-adenosylmethionine synthetase, N-terminal domain LDH64_14640 PF02773 S-adenosylmethionine synthetase, C-terminal domain LDH64_14645 PF10263 SprT-like family LDH64_14645 PF17283 SprT-like zinc ribbon domain LDH64_14650 PF04231 Endonuclease I LDH64_14655 PF04452 RNA methyltransferase LDH64_14660 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LDH64_14660 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LDH64_14665 PF02622 Uncharacterized ACR, COG1678 LDH64_14670 PF03652 Holliday junction resolvase LDH64_14675 PF00795 Carbon-nitrogen hydrolase LDH64_14680 PF04371 Porphyromonas-type peptidyl-arginine deiminase LDH64_14685 PF00437 Type II/IV secretion system protein LDH64_14690 PF01168 Alanine racemase, N-terminal domain LDH64_14695 PF03807 NADP oxidoreductase coenzyme F420-dependent LDH64_14695 PF14748 Pyrroline-5-carboxylate reductase dimerisation LDH64_14700 PF02325 YGGT family LDH64_14705 PF02594 Uncharacterised ACR, YggU family COG1872 LDH64_14710 PF01725 Ham1 family LDH64_14715 PF06969 HemN C-terminal domain LDH64_14715 PF04055 Radical SAM superfamily LDH64_14720 PF16671 Actin cross-linking domain LDH64_14720 PF12146 Serine aminopeptidase, S33 LDH64_14720 PF11647 Membrane Localization Domain LDH64_14720 PF07634 RtxA repeat LDH64_14720 PF11713 Peptidase C80 family LDH64_14730 PF04960 Glutaminase LDH64_14735 PF04320 Protein with unknown function (DUF469) LDH64_14740 PF02390 Putative methyltransferase LDH64_14745 PF00633 Helix-hairpin-helix motif LDH64_14745 PF10576 Iron-sulfur binding domain of endonuclease III LDH64_14745 PF00730 HhH-GPD superfamily base excision DNA repair protein LDH64_14745 PF14815 NUDIX domain LDH64_14750 PF04362 Bacterial Fe(2+) trafficking LDH64_14755 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LDH64_14755 PF01464 Transglycosylase SLT domain LDH64_14765 PF07715 TonB-dependent Receptor Plug Domain LDH64_14770 PF02653 Branched-chain amino acid transport system / permease component LDH64_14775 PF00005 ABC transporter LDH64_14780 PF13407 Periplasmic binding protein domain LDH64_14785 PF01276 Orn/Lys/Arg decarboxylase, major domain LDH64_14785 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LDH64_14785 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LDH64_14845 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LDH64_14845 PF04717 Type VI secretion system, phage-baseplate injector LDH64_14845 PF13296 Putative type VI secretion system Rhs element Vgr LDH64_14850 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_14850 PF17871 AAA lid domain LDH64_14850 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_14850 PF07724 AAA domain (Cdc48 subfamily) LDH64_14875 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LDH64_14900 PF02517 CPBP intramembrane metalloprotease LDH64_14905 PF00765 Autoinducer synthase LDH64_14910 PF03472 Autoinducer binding domain LDH64_14910 PF00196 Bacterial regulatory proteins, luxR family LDH64_14945 PF04183 IucA / IucC family LDH64_14945 PF06276 Ferric iron reductase FhuF-like transporter LDH64_14950 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LDH64_14955 PF07715 TonB-dependent Receptor Plug Domain LDH64_14955 PF00593 TonB dependent receptor LDH64_14975 PF00356 Bacterial regulatory proteins, lacI family LDH64_14980 PF00939 Sodium:sulfate symporter transmembrane region LDH64_14995 PF05593 RHS Repeat LDH64_14995 PF03527 RHS protein LDH64_15005 PF04717 Type VI secretion system, phage-baseplate injector LDH64_15010 PF12951 Passenger-associated-transport-repeat LDH64_15020 PF02447 GntP family permease LDH64_15035 PF00664 ABC transporter transmembrane region LDH64_15035 PF00005 ABC transporter LDH64_15040 PF00664 ABC transporter transmembrane region LDH64_15040 PF00005 ABC transporter LDH64_15040 PF08021 Siderophore-interacting FAD-binding domain LDH64_15040 PF04954 Siderophore-interacting protein LDH64_15050 PF00975 Thioesterase domain LDH64_15065 PF00501 AMP-binding enzyme LDH64_15065 PF00668 Condensation domain LDH64_15065 PF00550 Phosphopantetheine attachment site LDH64_15065 PF08242 Methyltransferase domain LDH64_15070 PF00501 AMP-binding enzyme LDH64_15070 PF13193 AMP-binding enzyme C-terminal domain LDH64_15070 PF00668 Condensation domain LDH64_15075 PF00668 Condensation domain LDH64_15075 PF00501 AMP-binding enzyme LDH64_15075 PF00550 Phosphopantetheine attachment site LDH64_15075 PF08242 Methyltransferase domain LDH64_15080 PF01695 IstB-like ATP binding protein LDH64_15085 PF00665 Integrase core domain LDH64_15085 PF02796 Helix-turn-helix domain of resolvase LDH64_15090 PF00550 Phosphopantetheine attachment site LDH64_15090 PF02801 Beta-ketoacyl synthase, C-terminal domain LDH64_15090 PF00109 Beta-ketoacyl synthase, N-terminal domain LDH64_15090 PF16197 Ketoacyl-synthetase C-terminal extension LDH64_15090 PF00668 Condensation domain LDH64_15090 PF00202 Aminotransferase class-III LDH64_15090 PF00501 AMP-binding enzyme LDH64_15090 PF13193 AMP-binding enzyme C-terminal domain LDH64_15095 PF07715 TonB-dependent Receptor Plug Domain LDH64_15095 PF00593 TonB dependent receptor LDH64_15100 PF01546 Peptidase family M20/M25/M40 LDH64_15100 PF07687 Peptidase dimerisation domain LDH64_15105 PF03806 AbgT putative transporter family LDH64_15110 PF14496 C-terminal novel E3 ligase, LRR-interacting LDH64_15110 PF12468 Type III secretion system leucine rich repeat protein LDH64_15115 PF14496 C-terminal novel E3 ligase, LRR-interacting LDH64_15115 PF12468 Type III secretion system leucine rich repeat protein LDH64_15115 PF14496 C-terminal novel E3 ligase, LRR-interacting LDH64_15115 PF12468 Type III secretion system leucine rich repeat protein LDH64_15125 PF14496 C-terminal novel E3 ligase, LRR-interacting LDH64_15125 PF12468 Type III secretion system leucine rich repeat protein LDH64_15130 PF03797 Autotransporter beta-domain LDH64_15140 PF07906 ShET2 enterotoxin, N-terminal region LDH64_15145 PF00873 AcrB/AcrD/AcrF family LDH64_15150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_15150 PF00529 HlyD membrane-fusion protein of T1SS LDH64_15160 PF00563 EAL domain LDH64_15160 PF00990 Diguanylate cyclase, GGDEF domain LDH64_15160 PF08447 PAS fold LDH64_15160 PF08448 PAS fold LDH64_15195 PF00691 OmpA family LDH64_15195 PF13677 Membrane MotB of proton-channel complex MotA/MotB LDH64_15200 PF01618 MotA/TolQ/ExbB proton channel family LDH64_15205 PF04542 Sigma-70 region 2 LDH64_15205 PF04545 Sigma-70, region 4 LDH64_15230 PF07196 Flagellin hook IN motif LDH64_15230 PF07195 Flagellar hook-associated protein 2 C-terminus LDH64_15230 PF02465 Flagellar hook-associated protein 2 N-terminus LDH64_15235 PF00700 Bacterial flagellin C-terminal helical region LDH64_15235 PF00669 Bacterial flagellin N-terminal helical region LDH64_15240 PF00700 Bacterial flagellin C-terminal helical region LDH64_15240 PF00669 Bacterial flagellin N-terminal helical region LDH64_15245 PF00700 Bacterial flagellin C-terminal helical region LDH64_15245 PF00669 Bacterial flagellin N-terminal helical region LDH64_15250 PF18500 CadC C-terminal domain 1 LDH64_15250 PF00486 Transcriptional regulatory protein, C terminal LDH64_15270 PF00460 Flagella basal body rod protein LDH64_15270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_15280 PF02119 Flagellar P-ring protein LDH64_15285 PF02107 Flagellar L-ring protein LDH64_15290 PF00460 Flagella basal body rod protein LDH64_15290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_15295 PF00460 Flagella basal body rod protein LDH64_15295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_15300 PF07559 Flagellar basal body protein FlaE LDH64_15300 PF00460 Flagella basal body rod protein LDH64_15300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_15305 PF03963 Flagellar hook capping protein - N-terminal region LDH64_15305 PF13860 FlgD Ig-like domain LDH64_15305 PF13861 FlgD Tudor-like domain LDH64_15310 PF00460 Flagella basal body rod protein LDH64_15310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LDH64_15315 PF00460 Flagella basal body rod protein LDH64_15320 PF13144 Chaperone for flagella basal body P-ring formation LDH64_15340 PF18269 T3SS EscN ATPase C-terminal domain LDH64_15340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDH64_15355 PF08345 Flagellar M-ring protein C-terminal LDH64_15355 PF01514 Secretory protein of YscJ/FliF family LDH64_15360 PF02049 Flagellar hook-basal body complex protein FliE LDH64_15365 PF02954 Bacterial regulatory protein, Fis family LDH64_15365 PF00072 Response regulator receiver domain LDH64_15365 PF00158 Sigma-54 interaction domain LDH64_15375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LDH64_15380 PF00813 FliP family LDH64_15385 PF01313 Bacterial export proteins, family 3 LDH64_15390 PF01311 Bacterial export proteins, family 1 LDH64_15395 PF01312 FlhB HrpN YscU SpaS Family LDH64_15400 PF00771 FHIPEP family LDH64_15415 PF01497 Periplasmic binding protein LDH64_15420 PF00419 Fimbrial protein LDH64_15420 PF09222 Fimbrial adhesin F17-AG, lectin domain LDH64_15425 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_15425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_15430 PF13953 PapC C-terminal domain LDH64_15430 PF13954 PapC N-terminal domain LDH64_15430 PF00577 Outer membrane usher protein LDH64_15450 PF13629 Pilus formation protein N terminal region LDH64_15450 PF04972 BON domain LDH64_15450 PF00263 Bacterial type II and III secretion system protein LDH64_15455 PF13629 Pilus formation protein N terminal region LDH64_15455 PF04972 BON domain LDH64_15455 PF00263 Bacterial type II and III secretion system protein LDH64_15470 PF00437 Type II/IV secretion system protein LDH64_15505 PF02472 Biopolymer transport protein ExbD/TolR LDH64_15510 PF01618 MotA/TolQ/ExbB proton channel family LDH64_15515 PF01053 Cys/Met metabolism PLP-dependent enzyme LDH64_15520 PF09335 SNARE associated Golgi protein LDH64_15525 PF12833 Helix-turn-helix domain LDH64_15525 PF06719 AraC-type transcriptional regulator N-terminus LDH64_15530 PF00465 Iron-containing alcohol dehydrogenase LDH64_15540 PF00248 Aldo/keto reductase family LDH64_15550 PF07731 Multicopper oxidase LDH64_15550 PF07732 Multicopper oxidase LDH64_15555 PF01553 Acyltransferase LDH64_15560 PF03989 DNA gyrase C-terminal domain, beta-propeller LDH64_15560 PF00521 DNA gyrase/topoisomerase IV, subunit A LDH64_15570 PF02525 Flavodoxin-like fold LDH64_15575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_15575 PF03466 LysR substrate binding domain LDH64_15580 PF01751 Toprim domain LDH64_15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_15580 PF00204 DNA gyrase B LDH64_15580 PF00986 DNA gyrase B subunit, carboxyl terminus LDH64_15585 PF05728 Uncharacterised protein family (UPF0227) LDH64_15590 PF00149 Calcineurin-like phosphoesterase LDH64_15595 PF06853 Protein of unknown function (DUF1249) LDH64_15600 PF00293 NUDIX domain LDH64_15605 PF02321 Outer membrane efflux protein LDH64_15610 PF01797 Transposase IS200 like LDH64_15615 PF06693 Protein of unknown function (DUF1190) LDH64_15620 PF03738 Glutathionylspermidine synthase preATP-grasp LDH64_15625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LDH64_15630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDH64_15635 PF04380 Membrane fusogenic activity LDH64_15645 PF13520 Amino acid permease LDH64_15650 PF01467 Cytidylyltransferase-like LDH64_15650 PF00294 pfkB family carbohydrate kinase LDH64_15655 PF08335 GlnD PII-uridylyltransferase LDH64_15655 PF03710 Glutamate-ammonia ligase adenylyltransferase LDH64_15660 PF01928 CYTH domain LDH64_15665 PF08239 Bacterial SH3 domain LDH64_15670 PF01743 Poly A polymerase head domain LDH64_15670 PF01966 HD domain LDH64_15670 PF12627 Probable RNA and SrmB- binding site of polymerase A LDH64_15675 PF02673 Bacitracin resistance protein BacA LDH64_15680 PF02152 Dihydroneopterin aldolase LDH64_15685 PF02660 Glycerol-3-phosphate acyltransferase LDH64_15690 PF00814 Glycoprotease family LDH64_15695 PF01165 Ribosomal protein S21 LDH64_15700 PF10410 DnaB-helicase binding domain of primase LDH64_15700 PF08275 DNA primase catalytic core, N-terminal domain LDH64_15700 PF01807 CHC2 zinc finger LDH64_15700 PF08278 DNA primase DnaG DnaB-binding LDH64_15705 PF03979 Sigma-70 factor, region 1.1 LDH64_15705 PF00140 Sigma-70 factor, region 1.2 LDH64_15705 PF04542 Sigma-70 region 2 LDH64_15705 PF04546 Sigma-70, non-essential region LDH64_15705 PF04539 Sigma-70 region 3 LDH64_15705 PF04545 Sigma-70, region 4 LDH64_15765 PF03466 LysR substrate binding domain LDH64_15765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_15785 PF01042 Endoribonuclease L-PSP LDH64_15810 PF00155 Aminotransferase class I and II LDH64_15825 PF00529 HlyD membrane-fusion protein of T1SS LDH64_15825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_15830 PF04632 Fusaric acid resistance protein family LDH64_15840 PF01915 Glycosyl hydrolase family 3 C-terminal domain LDH64_15840 PF00933 Glycosyl hydrolase family 3 N terminal domain LDH64_15840 PF14310 Fibronectin type III-like domain LDH64_15850 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_15855 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_15860 PF01547 Bacterial extracellular solute-binding protein LDH64_15865 PF00356 Bacterial regulatory proteins, lacI family LDH64_15870 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LDH64_15875 PF03459 TOBE domain LDH64_15875 PF17912 MalK OB fold domain LDH64_15875 PF00005 ABC transporter LDH64_15895 PF04829 Pre-toxin domain with VENN motif LDH64_15895 PF05860 haemagglutination activity domain LDH64_15895 PF13332 Hemagglutinin repeat LDH64_15895 PF13018 Extended Signal Peptide of Type V secretion system LDH64_15900 PF13332 Hemagglutinin repeat LDH64_15900 PF13018 Extended Signal Peptide of Type V secretion system LDH64_15900 PF04829 Pre-toxin domain with VENN motif LDH64_15900 PF05860 haemagglutination activity domain LDH64_15915 PF13332 Hemagglutinin repeat LDH64_15915 PF04829 Pre-toxin domain with VENN motif LDH64_15920 PF04829 Pre-toxin domain with VENN motif LDH64_15920 PF13332 Hemagglutinin repeat LDH64_15930 PF13332 Hemagglutinin repeat LDH64_15930 PF13018 Extended Signal Peptide of Type V secretion system LDH64_15930 PF05860 haemagglutination activity domain LDH64_15930 PF04829 Pre-toxin domain with VENN motif LDH64_15935 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LDH64_15935 PF17287 POTRA domain LDH64_15935 PF08479 POTRA domain, ShlB-type LDH64_15940 PF00092 von Willebrand factor type A domain LDH64_15945 PF02342 TerD domain LDH64_15970 PF03729 Short repeat of unknown function (DUF308) LDH64_15975 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_15975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDH64_15980 PF05175 Methyltransferase small domain LDH64_15985 PF03797 Autotransporter beta-domain LDH64_15990 PF01863 Protein of unknown function DUF45 LDH64_15995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDH64_16000 PF00375 Sodium:dicarboxylate symporter family LDH64_16005 PF01797 Transposase IS200 like LDH64_16010 PF10688 Bacterial inner membrane protein LDH64_16015 PF08666 SAF domain LDH64_16015 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LDH64_16020 PF08125 Mannitol dehydrogenase C-terminal domain LDH64_16020 PF01232 Mannitol dehydrogenase Rossmann domain LDH64_16025 PF02614 Glucuronate isomerase LDH64_16035 PF07690 Major Facilitator Superfamily LDH64_16040 PF00392 Bacterial regulatory proteins, gntR family LDH64_16040 PF07729 FCD domain LDH64_16050 PF09335 SNARE associated Golgi protein LDH64_16055 PF13721 SecD export protein N-terminal TM region LDH64_16065 PF05957 Bacterial protein of unknown function (DUF883) LDH64_16070 PF07332 Putative Actinobacterial Holin-X, holin superfamily III LDH64_16080 PF07681 DoxX LDH64_16090 PF02796 Helix-turn-helix domain of resolvase LDH64_16090 PF00665 Integrase core domain LDH64_16095 PF01695 IstB-like ATP binding protein LDH64_16100 PF00293 NUDIX domain LDH64_16110 PF01043 SecA preprotein cross-linking domain LDH64_16110 PF07516 SecA Wing and Scaffold domain LDH64_16110 PF07517 SecA DEAD-like domain LDH64_16110 PF02810 SEC-C motif LDH64_16115 PF06558 Secretion monitor precursor protein (SecM) LDH64_16125 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LDH64_16130 PF00091 Tubulin/FtsZ family, GTPase domain LDH64_16130 PF12327 FtsZ family, C-terminal domain LDH64_16135 PF02491 SHS2 domain inserted in FTSA LDH64_16140 PF03799 Cell division protein FtsQ LDH64_16140 PF08478 POTRA domain, FtsQ-type LDH64_16145 PF07478 D-ala D-ala ligase C-terminus LDH64_16145 PF01820 D-ala D-ala ligase N-terminus LDH64_16150 PF01225 Mur ligase family, catalytic domain LDH64_16150 PF02875 Mur ligase family, glutamate ligase domain LDH64_16150 PF08245 Mur ligase middle domain LDH64_16155 PF03033 Glycosyltransferase family 28 N-terminal domain LDH64_16155 PF04101 Glycosyltransferase family 28 C-terminal domain LDH64_16160 PF01098 Cell cycle protein LDH64_16165 PF02875 Mur ligase family, glutamate ligase domain LDH64_16165 PF08245 Mur ligase middle domain LDH64_16170 PF00953 Glycosyl transferase family 4 LDH64_16170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LDH64_16175 PF01225 Mur ligase family, catalytic domain LDH64_16175 PF02875 Mur ligase family, glutamate ligase domain LDH64_16175 PF08245 Mur ligase middle domain LDH64_16180 PF02875 Mur ligase family, glutamate ligase domain LDH64_16180 PF01225 Mur ligase family, catalytic domain LDH64_16180 PF08245 Mur ligase middle domain LDH64_16185 PF00905 Penicillin binding protein transpeptidase domain LDH64_16185 PF03717 Penicillin-binding Protein dimerisation domain LDH64_16190 PF04999 Cell division protein FtsL LDH64_16195 PF01795 MraW methylase family LDH64_16200 PF02381 MraZ protein, putative antitoxin-like LDH64_16210 PF06610 L-alanine exporter LDH64_16215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LDH64_16215 PF00356 Bacterial regulatory proteins, lacI family LDH64_16220 PF01797 Transposase IS200 like LDH64_16225 PF10369 Small subunit of acetolactate synthase LDH64_16230 PF00205 Thiamine pyrophosphate enzyme, central domain LDH64_16230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDH64_16230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDH64_16235 PF00501 AMP-binding enzyme LDH64_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_16240 PF03466 LysR substrate binding domain LDH64_16250 PF01797 Transposase IS200 like LDH64_16255 PF08502 LeuA allosteric (dimerisation) domain LDH64_16255 PF00682 HMGL-like LDH64_16260 PF00180 Isocitrate/isopropylmalate dehydrogenase LDH64_16265 PF00330 Aconitase family (aconitate hydratase) LDH64_16270 PF00694 Aconitase C-terminal domain LDH64_16275 PF07690 Major Facilitator Superfamily LDH64_16280 PF12793 Sugar transport-related sRNA regulator N-term LDH64_16280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDH64_16295 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_16300 PF00005 ABC transporter LDH64_16305 PF09335 SNARE associated Golgi protein LDH64_16310 PF03104 DNA polymerase family B, exonuclease domain LDH64_16310 PF00136 DNA polymerase family B LDH64_16315 PF18339 RapA N-terminal Tudor like domain 1 LDH64_16315 PF00176 SNF2 family N-terminal domain LDH64_16315 PF18337 RapA N-terminal Tudor like domain LDH64_16315 PF12137 RNA polymerase recycling family C-terminal LDH64_16315 PF00271 Helicase conserved C-terminal domain LDH64_16330 PF14331 ImcF-related N-terminal domain LDH64_16330 PF06761 Intracellular multiplication and human macrophage-killing LDH64_16330 PF06744 Type VI secretion protein IcmF C-terminal LDH64_16335 PF05736 OprF membrane domain LDH64_16335 PF00691 OmpA family LDH64_16340 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LDH64_16370 PF04717 Type VI secretion system, phage-baseplate injector LDH64_16370 PF06715 Gp5 C-terminal repeat (3 copies) LDH64_16375 PF07724 AAA domain (Cdc48 subfamily) LDH64_16375 PF17871 AAA lid domain LDH64_16375 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_16375 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_16385 PF05947 Type VI secretion system, TssF LDH64_16400 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LDH64_16405 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LDH64_16420 PF00849 RNA pseudouridylate synthase LDH64_16425 PF05099 Tellurite resistance protein TerB LDH64_16425 PF00226 DnaJ domain LDH64_16430 PF03968 OstA-like protein LDH64_16430 PF04453 LPS transport system D LDH64_16435 PF00639 PPIC-type PPIASE domain LDH64_16435 PF09312 SurA N-terminal domain LDH64_16440 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LDH64_16445 PF00398 Ribosomal RNA adenine dimethylase LDH64_16450 PF04379 ApaG domain LDH64_16455 PF00149 Calcineurin-like phosphoesterase LDH64_16470 PF01797 Transposase IS200 like LDH64_16475 PF00186 Dihydrofolate reductase LDH64_16480 PF12821 Threonine/Serine exporter, ThrE LDH64_16485 PF06738 Putative threonine/serine exporter LDH64_16490 PF01810 LysE type translocator LDH64_16495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDH64_16495 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDH64_16495 PF02142 MGS-like domain LDH64_16500 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDH64_16500 PF00117 Glutamine amidotransferase class-I LDH64_16505 PF05173 Dihydrodipicolinate reductase, C-terminus LDH64_16505 PF01113 Dihydrodipicolinate reductase, N-terminus LDH64_16510 PF01797 Transposase IS200 like LDH64_16515 PF02401 LytB protein LDH64_16520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDH64_16525 PF01252 Signal peptidase (SPase) II LDH64_16530 PF08264 Anticodon-binding domain of tRNA LDH64_16530 PF00133 tRNA synthetases class I (I, L, M and V) LDH64_16530 PF06827 Zinc finger found in FPG and IleRS LDH64_16535 PF06574 FAD synthetase LDH64_16535 PF01687 Riboflavin kinase LDH64_16540 PF01649 Ribosomal protein S20 LDH64_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_16545 PF03466 LysR substrate binding domain LDH64_16550 PF06965 Na+/H+ antiporter 1 LDH64_16555 PF00226 DnaJ domain LDH64_16555 PF01556 DnaJ C terminal domain LDH64_16555 PF00684 DnaJ central domain LDH64_16560 PF00012 Hsp70 protein LDH64_16565 PF01184 GPR1/FUN34/yaaH family LDH64_16575 PF07690 Major Facilitator Superfamily LDH64_16580 PF00994 Probable molybdopterin binding domain LDH64_16585 PF00923 Transaldolase/Fructose-6-phosphate aldolase LDH64_16595 PF03883 Peroxide stress protein YaaA LDH64_16600 PF00291 Pyridoxal-phosphate dependent enzyme LDH64_16600 PF14821 Threonine synthase N terminus LDH64_16605 PF08544 GHMP kinases C terminal LDH64_16605 PF00288 GHMP kinases N terminal domain LDH64_16610 PF03447 Homoserine dehydrogenase, NAD binding domain LDH64_16610 PF00742 Homoserine dehydrogenase LDH64_16610 PF13840 ACT domain LDH64_16610 PF01842 ACT domain LDH64_16610 PF00696 Amino acid kinase family LDH64_16615 PF08254 Threonine leader peptide LDH64_16625 PF00072 Response regulator receiver domain LDH64_16625 PF00486 Transcriptional regulatory protein, C terminal LDH64_16630 PF05981 CreA protein LDH64_16635 PF06445 GyrI-like small molecule binding domain LDH64_16635 PF12833 Helix-turn-helix domain LDH64_16640 PF00300 Histidine phosphatase superfamily (branch 1) LDH64_16645 PF01931 Protein of unknown function DUF84 LDH64_16650 PF01371 Trp repressor protein LDH64_16655 PF14718 Soluble lytic murein transglycosylase L domain LDH64_16655 PF01464 Transglycosylase SLT domain LDH64_16660 PF00689 Cation transporting ATPase, C-terminus LDH64_16660 PF00690 Cation transporter/ATPase, N-terminus LDH64_16670 PF17152 Periplasmic sensor domain LDH64_16670 PF00990 Diguanylate cyclase, GGDEF domain LDH64_16675 PF00691 OmpA family LDH64_16685 PF02661 Fic/DOC family LDH64_16690 PF13521 AAA domain LDH64_16690 PF01381 Helix-turn-helix LDH64_16695 PF18073 Rubredoxin metal binding domain LDH64_16700 PF18429 Domain of unknown function (DUF5609) LDH64_16705 PF10144 Bacterial virulence factor haemolysin LDH64_16710 PF01048 Phosphorylase superfamily LDH64_16715 PF01676 Metalloenzyme superfamily LDH64_16725 PF01791 DeoC/LacD family aldolase LDH64_16730 PF07670 Nucleoside recognition LDH64_16730 PF07662 Na+ dependent nucleoside transporter C-terminus LDH64_16730 PF01773 Na+ dependent nucleoside transporter N-terminus LDH64_16735 PF01026 TatD related DNase LDH64_16740 PF01734 Patatin-like phospholipase LDH64_16745 PF07043 Protein of unknown function (DUF1328) LDH64_16750 PF04972 BON domain LDH64_16755 PF00009 Elongation factor Tu GTP binding domain LDH64_16755 PF03144 Elongation factor Tu domain 2 LDH64_16755 PF16658 Class II release factor RF3, C-terminal domain LDH64_16760 PF00583 Acetyltransferase (GNAT) family LDH64_16765 PF03603 DNA polymerase III psi subunit LDH64_16770 PF05175 Methyltransferase small domain LDH64_16770 PF08468 Methyltransferase small domain N-terminal LDH64_16780 PF07256 Protein of unknown function (DUF1435) LDH64_16785 PF00990 Diguanylate cyclase, GGDEF domain LDH64_16790 PF01095 Pectinesterase LDH64_16805 PF00873 AcrB/AcrD/AcrF family LDH64_16810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_16825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDH64_16830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_16830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_16845 PF00005 ABC transporter LDH64_16850 PF02653 Branched-chain amino acid transport system / permease component LDH64_16855 PF02653 Branched-chain amino acid transport system / permease component LDH64_16860 PF13407 Periplasmic binding protein domain LDH64_16865 PF01791 DeoC/LacD family aldolase LDH64_16870 PF03992 Antibiotic biosynthesis monooxygenase LDH64_16875 PF10696 Protein of unknown function (DUF2501) LDH64_16880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDH64_16880 PF00381 PTS HPr component phosphorylation site LDH64_16880 PF05524 PEP-utilising enzyme, N-terminal LDH64_16880 PF02896 PEP-utilising enzyme, TIM barrel domain LDH64_16880 PF00391 PEP-utilising enzyme, mobile domain LDH64_16890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDH64_16895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDH64_16900 PF12833 Helix-turn-helix domain LDH64_16910 PF05987 Bacterial protein of unknown function (DUF898) LDH64_16925 PF00665 Integrase core domain LDH64_16950 PF01555 DNA methylase LDH64_16965 PF07728 AAA domain (dynein-related subfamily) LDH64_16965 PF12102 Domain of unknown function (DUF3578) LDH64_16970 PF00665 Integrase core domain LDH64_16970 PF02796 Helix-turn-helix domain of resolvase LDH64_16975 PF01695 IstB-like ATP binding protein LDH64_16980 PF07338 Protein of unknown function (DUF1471) LDH64_16985 PF02770 Acyl-CoA dehydrogenase, middle domain LDH64_16985 PF18158 Adaptive response protein AidB N-terminal domain LDH64_16985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDH64_16990 PF00588 SpoU rRNA Methylase family LDH64_16990 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDH64_16995 PF00575 S1 RNA binding domain LDH64_16995 PF08461 Ribonuclease R winged-helix domain LDH64_16995 PF08206 Ribonuclease B OB domain LDH64_16995 PF17876 Cold shock domain LDH64_16995 PF00773 RNB domain LDH64_17000 PF02082 Transcriptional regulator LDH64_17005 PF00709 Adenylosuccinate synthetase LDH64_17010 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LDH64_17015 PF01145 SPFH domain / Band 7 family LDH64_17020 PF01145 SPFH domain / Band 7 family LDH64_17020 PF12221 Bacterial membrane protein N terminal LDH64_17025 PF16360 GTP-binding GTPase Middle Region LDH64_17025 PF13167 GTP-binding GTPase N-terminal LDH64_17025 PF01926 50S ribosome-binding GTPase LDH64_17030 PF17209 Hfq protein LDH64_17040 PF01119 DNA mismatch repair protein, C-terminal domain LDH64_17040 PF08676 MutL C terminal dimerisation domain LDH64_17045 PF01520 N-acetylmuramoyl-L-alanine amidase LDH64_17050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LDH64_17055 PF01256 Carbohydrate kinase LDH64_17055 PF03853 YjeF-related protein N-terminus LDH64_17060 PF08331 Domain of unknown function (DUF1730) LDH64_17070 PF00929 Exonuclease LDH64_17075 PF03193 RsgA GTPase LDH64_17080 PF02666 Phosphatidylserine decarboxylase LDH64_17085 PF12795 Mechanosensitive ion channel porin domain LDH64_17085 PF12794 Mechanosensitive ion channel inner membrane domain 1 LDH64_17085 PF00924 Mechanosensitive ion channel LDH64_17090 PF00152 tRNA synthetases class II (D, K and N) LDH64_17100 PF02910 Fumarate reductase flavoprotein C-term LDH64_17100 PF00890 FAD binding domain LDH64_17105 PF13085 2Fe-2S iron-sulfur cluster binding domain LDH64_17105 PF13183 4Fe-4S dicluster domain LDH64_17110 PF02300 Fumarate reductase subunit C LDH64_17115 PF02313 Fumarate reductase subunit D LDH64_17120 PF00893 Small Multidrug Resistance protein LDH64_17125 PF08207 Elongation factor P (EF-P) KOW-like domain LDH64_17125 PF01132 Elongation factor P (EF-P) OB domain LDH64_17125 PF09285 Elongation factor P, C-terminal LDH64_17130 PF04055 Radical SAM superfamily LDH64_17135 PF13698 Domain of unknown function (DUF4156) LDH64_17140 PF00118 TCP-1/cpn60 chaperonin family LDH64_17145 PF00166 Chaperonin 10 Kd subunit LDH64_17150 PF04186 FxsA cytoplasmic membrane protein LDH64_17155 PF10415 Fumarase C C-terminus LDH64_17155 PF00206 Lyase LDH64_17160 PF03605 Anaerobic c4-dicarboxylate membrane transporter LDH64_17165 PF03091 CutA1 divalent ion tolerance protein LDH64_17170 PF11412 Disulphide bond corrector protein DsbC LDH64_17170 PF02683 Cytochrome C biogenesis protein transmembrane region LDH64_17175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDH64_17175 PF00384 Molybdopterin oxidoreductase LDH64_17175 PF01568 Molydopterin dinucleotide binding domain LDH64_17180 PF13247 4Fe-4S dicluster domain LDH64_17180 PF12800 4Fe-4S binding domain LDH64_17185 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_17185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDH64_17185 PF13247 4Fe-4S dicluster domain LDH64_17220 PF06379 L-rhamnose-proton symport protein (RhaT) LDH64_17225 PF02311 AraC-like ligand binding domain LDH64_17225 PF12833 Helix-turn-helix domain LDH64_17230 PF02311 AraC-like ligand binding domain LDH64_17230 PF12833 Helix-turn-helix domain LDH64_17240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_17240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_17245 PF06134 L-rhamnose isomerase (RhaA) LDH64_17250 PF00596 Class II Aldolase and Adducin N-terminal domain LDH64_17255 PF00465 Iron-containing alcohol dehydrogenase LDH64_17260 PF05336 L-rhamnose mutarotase LDH64_17265 PF00436 Single-strand binding protein family LDH64_17270 PF17755 UvrA DNA-binding domain LDH64_17270 PF17760 UvrA interaction domain LDH64_17270 PF00005 ABC transporter LDH64_17275 PF04237 YjbR LDH64_17280 PF00155 Aminotransferase class I and II LDH64_17285 PF00842 Alanine racemase, C-terminal domain LDH64_17285 PF01168 Alanine racemase, N-terminal domain LDH64_17290 PF00772 DnaB-like helicase N terminal domain LDH64_17290 PF03796 DnaB-like helicase C terminal domain LDH64_17295 PF08240 Alcohol dehydrogenase GroES-like domain LDH64_17295 PF00107 Zinc-binding dehydrogenase LDH64_17300 PF09583 Phage shock protein G (Phageshock_PspG) LDH64_17305 PF01207 Dihydrouridine synthase (Dus) LDH64_17310 PF01475 Ferric uptake regulator family LDH64_17315 PF01726 LexA DNA binding domain LDH64_17315 PF00717 Peptidase S24-like LDH64_17320 PF01219 Prokaryotic diacylglycerol kinase LDH64_17325 PF01553 Acyltransferase LDH64_17330 PF01040 UbiA prenyltransferase family LDH64_17335 PF04345 Chorismate lyase LDH64_17340 PF12951 Passenger-associated-transport-repeat LDH64_17345 PF08031 Berberine and berberine like LDH64_17345 PF01565 FAD binding domain LDH64_17360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_17365 PF13953 PapC C-terminal domain LDH64_17365 PF13954 PapC N-terminal domain LDH64_17365 PF00577 Outer membrane usher protein LDH64_17375 PF02342 TerD domain LDH64_17380 PF02342 TerD domain LDH64_17385 PF03741 Integral membrane protein TerC family LDH64_17390 PF05099 Tellurite resistance protein TerB LDH64_17395 PF02342 TerD domain LDH64_17400 PF02342 TerD domain LDH64_17420 PF15608 PELOTA RNA binding domain LDH64_17420 PF11202 Phosphoribosyl transferase (PRTase) LDH64_17440 PF04055 Radical SAM superfamily LDH64_17445 PF06228 Haem utilisation ChuX/HutX LDH64_17450 PF13460 NAD(P)H-binding LDH64_17455 PF10636 Hemin uptake protein hemP LDH64_17460 PF07715 TonB-dependent Receptor Plug Domain LDH64_17460 PF00593 TonB dependent receptor LDH64_17465 PF05171 Haemin-degrading HemS.ChuX domain LDH64_17470 PF01497 Periplasmic binding protein LDH64_17475 PF01032 FecCD transport family LDH64_17480 PF00005 ABC transporter LDH64_17485 PF01053 Cys/Met metabolism PLP-dependent enzyme LDH64_17490 PF03222 Tryptophan/tyrosine permease family LDH64_17495 PF03466 LysR substrate binding domain LDH64_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_17500 PF01206 Sulfurtransferase TusA LDH64_17505 PF04143 Sulphur transport LDH64_17515 PF01312 FlhB HrpN YscU SpaS Family LDH64_17520 PF01311 Bacterial export proteins, family 1 LDH64_17525 PF01313 Bacterial export proteins, family 3 LDH64_17530 PF00813 FliP family LDH64_17535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LDH64_17550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDH64_17550 PF18269 T3SS EscN ATPase C-terminal domain LDH64_17555 PF00771 FHIPEP family LDH64_17570 PF01514 Secretory protein of YscJ/FliF family LDH64_17605 PF00263 Bacterial type II and III secretion system protein LDH64_17605 PF03958 Bacterial type II/III secretion system short domain LDH64_17610 PF01627 Hpt domain LDH64_17610 PF00672 HAMP domain LDH64_17610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_17610 PF00512 His Kinase A (phospho-acceptor) domain LDH64_17610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDH64_17610 PF00072 Response regulator receiver domain LDH64_17615 PF00196 Bacterial regulatory proteins, luxR family LDH64_17615 PF00072 Response regulator receiver domain LDH64_17620 PF00375 Sodium:dicarboxylate symporter family LDH64_17625 PF00501 AMP-binding enzyme LDH64_17625 PF13193 AMP-binding enzyme C-terminal domain LDH64_17625 PF16177 Acetyl-coenzyme A synthetase N-terminus LDH64_17630 PF04341 Protein of unknown function, DUF485 LDH64_17635 PF00474 Sodium:solute symporter family LDH64_17645 PF02796 Helix-turn-helix domain of resolvase LDH64_17645 PF00665 Integrase core domain LDH64_17650 PF01695 IstB-like ATP binding protein LDH64_17690 PF01808 AICARFT/IMPCHase bienzyme LDH64_17690 PF02142 MGS-like domain LDH64_17695 PF02844 Phosphoribosylglycinamide synthetase, N domain LDH64_17695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LDH64_17695 PF02843 Phosphoribosylglycinamide synthetase, C domain LDH64_17700 PF07356 Protein of unknown function (DUF1481) LDH64_17705 PF00216 Bacterial DNA-binding protein LDH64_17710 PF04222 Protein of unknown function (DUF416) LDH64_17715 PF04493 Endonuclease V LDH64_17720 PF01208 Uroporphyrinogen decarboxylase (URO-D) LDH64_17730 PF09297 NADH pyrophosphatase zinc ribbon domain LDH64_17730 PF00293 NUDIX domain LDH64_17735 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LDH64_17740 PF01964 Radical SAM ThiC family LDH64_17740 PF13667 ThiC-associated domain LDH64_17745 PF02581 Thiamine monophosphate synthase LDH64_17750 PF00899 ThiF family LDH64_17760 PF05690 Thiazole biosynthesis protein ThiG LDH64_17765 PF06968 Biotin and Thiamin Synthesis associated domain LDH64_17765 PF04055 Radical SAM superfamily LDH64_17770 PF01797 Transposase IS200 like LDH64_17775 PF04997 RNA polymerase Rpb1, domain 1 LDH64_17775 PF04998 RNA polymerase Rpb1, domain 5 LDH64_17775 PF00623 RNA polymerase Rpb1, domain 2 LDH64_17775 PF04983 RNA polymerase Rpb1, domain 3 LDH64_17775 PF05000 RNA polymerase Rpb1, domain 4 LDH64_17780 PF04565 RNA polymerase Rpb2, domain 3 LDH64_17780 PF00562 RNA polymerase Rpb2, domain 6 LDH64_17780 PF04563 RNA polymerase beta subunit LDH64_17780 PF10385 RNA polymerase beta subunit external 1 domain LDH64_17780 PF04561 RNA polymerase Rpb2, domain 2 LDH64_17780 PF04560 RNA polymerase Rpb2, domain 7 LDH64_17785 PF16320 Ribosomal protein L7/L12 dimerisation domain LDH64_17785 PF00542 Ribosomal protein L7/L12 C-terminal domain LDH64_17790 PF00466 Ribosomal protein L10 LDH64_17795 PF00687 Ribosomal protein L1p/L10e family LDH64_17800 PF00298 Ribosomal protein L11, RNA binding domain LDH64_17800 PF03946 Ribosomal protein L11, N-terminal domain LDH64_17805 PF00467 KOW motif LDH64_17805 PF02357 Transcription termination factor nusG LDH64_17810 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LDH64_17815 PF00009 Elongation factor Tu GTP binding domain LDH64_17815 PF03144 Elongation factor Tu domain 2 LDH64_17815 PF03143 Elongation factor Tu C-terminal domain LDH64_17840 PF01695 IstB-like ATP binding protein LDH64_17845 PF02796 Helix-turn-helix domain of resolvase LDH64_17845 PF00665 Integrase core domain LDH64_17850 PF13673 Acetyltransferase (GNAT) domain LDH64_17855 PF00485 Phosphoribulokinase / Uridine kinase family LDH64_17860 PF08279 HTH domain LDH64_17860 PF03099 Biotin/lipoate A/B protein ligase family LDH64_17860 PF02237 Biotin protein ligase C terminal domain LDH64_17865 PF01565 FAD binding domain LDH64_17865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LDH64_17895 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_17895 PF07724 AAA domain (Cdc48 subfamily) LDH64_17895 PF17871 AAA lid domain LDH64_17895 PF02861 Clp amino terminal domain, pathogenicity island component LDH64_17895 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_17900 PF02578 Multi-copper polyphenol oxidoreductase laccase LDH64_17905 PF01479 S4 domain LDH64_17905 PF00849 RNA pseudouridylate synthase LDH64_17910 PF13525 Outer membrane lipoprotein LDH64_17915 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LDH64_17920 PF01797 Transposase IS200 like LDH64_17930 PF00665 Integrase core domain LDH64_17930 PF02796 Helix-turn-helix domain of resolvase LDH64_17935 PF01695 IstB-like ATP binding protein LDH64_17945 PF01817 Chorismate mutase type II LDH64_17945 PF02153 Prephenate dehydrogenase LDH64_17950 PF00793 DAHP synthetase I family LDH64_17955 PF04397 LytTr DNA-binding domain LDH64_17955 PF00072 Response regulator receiver domain LDH64_17965 PF04338 Protein of unknown function, DUF481 LDH64_17975 PF01245 Ribosomal protein L19 LDH64_17980 PF01746 tRNA (Guanine-1)-methyltransferase LDH64_17985 PF01782 RimM N-terminal domain LDH64_17985 PF05239 PRC-barrel domain LDH64_17990 PF00886 Ribosomal protein S16 LDH64_17995 PF00448 SRP54-type protein, GTPase domain LDH64_17995 PF02881 SRP54-type protein, helical bundle domain LDH64_17995 PF02978 Signal peptide binding domain LDH64_18000 PF01578 Cytochrome C assembly protein LDH64_18005 PF01595 Cyclin M transmembrane N-terminal domain LDH64_18005 PF00571 CBS domain LDH64_18005 PF03471 Transporter associated domain LDH64_18015 PF02664 S-Ribosylhomocysteinase (LuxS) LDH64_18020 PF04262 Glutamate-cysteine ligase LDH64_18025 PF09335 SNARE associated Golgi protein LDH64_18030 PF13419 Haloacid dehalogenase-like hydrolase LDH64_18060 PF02599 Global regulator protein family LDH64_18065 PF02272 DHHA1 domain LDH64_18065 PF01411 tRNA synthetases class II (A) LDH64_18065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDH64_18070 PF02631 RecX family LDH64_18075 PF00154 recA bacterial DNA recombination protein LDH64_18080 PF02464 Competence-damaged protein LDH64_18085 PF07690 Major Facilitator Superfamily LDH64_18100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_18100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_18105 PF02779 Transketolase, pyrimidine binding domain LDH64_18105 PF02780 Transketolase, C-terminal domain LDH64_18110 PF00456 Transketolase, thiamine diphosphate binding domain LDH64_18115 PF02653 Branched-chain amino acid transport system / permease component LDH64_18120 PF00005 ABC transporter LDH64_18130 PF13407 Periplasmic binding protein domain LDH64_18135 PF00141 Peroxidase LDH64_18140 PF07361 Cytochrome b562 LDH64_18145 PF01292 Prokaryotic cytochrome b561 LDH64_18150 PF02613 Nitrate reductase delta subunit LDH64_18155 PF04976 DMSO reductase anchor subunit (DmsC) LDH64_18160 PF13247 4Fe-4S dicluster domain LDH64_18160 PF12800 4Fe-4S binding domain LDH64_18165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDH64_18165 PF00384 Molybdopterin oxidoreductase LDH64_18165 PF01568 Molydopterin dinucleotide binding domain LDH64_18170 PF00596 Class II Aldolase and Adducin N-terminal domain LDH64_18175 PF00455 DeoR C terminal sensor domain LDH64_18175 PF08220 DeoR-like helix-turn-helix domain LDH64_18185 PF01797 Transposase IS200 like LDH64_18190 PF00005 ABC transporter LDH64_18195 PF02653 Branched-chain amino acid transport system / permease component LDH64_18200 PF02653 Branched-chain amino acid transport system / permease component LDH64_18205 PF01261 Xylose isomerase-like TIM barrel LDH64_18210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_18210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_18215 PF05681 Fumarate hydratase (Fumerase) LDH64_18215 PF05683 Fumarase C-terminus LDH64_18225 PF00557 Metallopeptidase family M24 LDH64_18235 PF07715 TonB-dependent Receptor Plug Domain LDH64_18235 PF00593 TonB dependent receptor LDH64_18245 PF14376 Haem-binding domain LDH64_18245 PF03150 Di-haem cytochrome c peroxidase LDH64_18245 PF00034 Cytochrome c LDH64_18250 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_18265 PF01022 Bacterial regulatory protein, arsR family LDH64_18270 PF02040 Arsenical pump membrane protein LDH64_18275 PF13936 Helix-turn-helix domain LDH64_18275 PF04198 Putative sugar-binding domain LDH64_18280 PF02734 DAK2 domain LDH64_18285 PF02733 Dak1 domain LDH64_18295 PF00107 Zinc-binding dehydrogenase LDH64_18295 PF08240 Alcohol dehydrogenase GroES-like domain LDH64_18300 PF02502 Ribose/Galactose Isomerase LDH64_18305 PF01624 MutS domain I LDH64_18305 PF00488 MutS domain V LDH64_18305 PF05188 MutS domain II LDH64_18305 PF05192 MutS domain III LDH64_18305 PF05190 MutS family domain IV LDH64_18310 PF00140 Sigma-70 factor, region 1.2 LDH64_18310 PF04542 Sigma-70 region 2 LDH64_18310 PF04539 Sigma-70 region 3 LDH64_18310 PF04545 Sigma-70, region 4 LDH64_18315 PF01476 LysM domain LDH64_18315 PF01551 Peptidase family M23 LDH64_18325 PF01975 Survival protein SurE LDH64_18330 PF01142 tRNA pseudouridine synthase D (TruD) LDH64_18335 PF02542 YgbB family LDH64_18340 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LDH64_18345 PF04977 Septum formation initiator LDH64_18350 PF12084 Protein of unknown function (DUF3561) LDH64_18360 PF00009 Elongation factor Tu GTP binding domain LDH64_18365 PF01507 Phosphoadenosine phosphosulfate reductase family LDH64_18370 PF10414 Sirohaem synthase dimerisation region LDH64_18370 PF14824 Sirohaem biosynthesis protein central LDH64_18370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDH64_18400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDH64_18400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDH64_18405 PF00175 Oxidoreductase NAD-binding domain LDH64_18405 PF00258 Flavodoxin LDH64_18405 PF00667 FAD binding domain LDH64_18410 PF01242 6-pyruvoyl tetrahydropterin synthase LDH64_18415 PF04055 Radical SAM superfamily LDH64_18420 PF00080 Copper/zinc superoxide dismutase (SODC) LDH64_18425 PF00113 Enolase, C-terminal TIM barrel domain LDH64_18425 PF03952 Enolase, N-terminal domain LDH64_18430 PF06418 CTP synthase N-terminus LDH64_18430 PF00117 Glutamine amidotransferase class-I LDH64_18435 PF03819 MazG nucleotide pyrophosphohydrolase domain LDH64_18440 PF04607 Region found in RelA / SpoT proteins LDH64_18440 PF13291 ACT domain LDH64_18440 PF02824 TGS domain LDH64_18445 PF05958 tRNA (Uracil-5-)-methyltransferase LDH64_18445 PF01938 TRAM domain LDH64_18455 PF00672 HAMP domain LDH64_18455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_18455 PF00512 His Kinase A (phospho-acceptor) domain LDH64_18455 PF01627 Hpt domain LDH64_18455 PF00072 Response regulator receiver domain LDH64_18455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDH64_18460 PF00595 PDZ domain LDH64_18465 PF13286 Phosphohydrolase-associated domain LDH64_18465 PF01966 HD domain LDH64_18470 PF01048 Phosphorylase superfamily LDH64_18475 PF01497 Periplasmic binding protein LDH64_18480 PF03458 UPF0126 domain LDH64_18485 PF01521 Iron-sulphur cluster biosynthesis LDH64_18490 PF00654 Voltage gated chloride channel LDH64_18495 PF00202 Aminotransferase class-III LDH64_18500 PF01032 FecCD transport family LDH64_18505 PF01497 Periplasmic binding protein LDH64_18515 PF00005 ABC transporter LDH64_18520 PF00912 Transglycosylase LDH64_18520 PF00905 Penicillin binding protein transpeptidase domain LDH64_18520 PF14814 Bifunctional transglycosylase second domain LDH64_18520 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal LDH64_18525 PF00270 DEAD/DEAH box helicase LDH64_18525 PF04408 Helicase associated domain (HA2) LDH64_18525 PF00271 Helicase conserved C-terminal domain LDH64_18525 PF08482 ATP-dependent helicase C-terminal LDH64_18530 PF02834 LigT like Phosphoesterase LDH64_18535 PF03749 Sugar fermentation stimulation protein RE domain LDH64_18535 PF17746 SfsA N-terminal OB domain LDH64_18540 PF01258 Prokaryotic dksA/traR C4-type zinc finger LDH64_18545 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDH64_18550 PF12627 Probable RNA and SrmB- binding site of polymerase A LDH64_18550 PF12626 Polymerase A arginine-rich C-terminus LDH64_18550 PF01743 Poly A polymerase head domain LDH64_18555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LDH64_18560 PF02548 Ketopantoate hydroxymethyltransferase LDH64_18565 PF02569 Pantoate-beta-alanine ligase LDH64_18570 PF02261 Aspartate decarboxylase LDH64_18580 PF01061 ABC-2 type transporter LDH64_18585 PF00005 ABC transporter LDH64_18590 PF00484 Carbonic anhydrase LDH64_18595 PF00156 Phosphoribosyl transferase domain LDH64_18600 PF10518 TAT (twin-arginine translocation) pathway signal sequence LDH64_18600 PF07731 Multicopper oxidase LDH64_18600 PF00394 Multicopper oxidase LDH64_18600 PF07732 Multicopper oxidase LDH64_18605 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) LDH64_18610 PF17284 Spermidine synthase tetramerisation domain LDH64_18615 PF02675 S-adenosylmethionine decarboxylase LDH64_18620 PF00892 EamA-like transporter family LDH64_18625 PF06062 Uncharacterised protein family (UPF0231) LDH64_18630 PF00330 Aconitase family (aconitate hydratase) LDH64_18630 PF06434 Aconitate hydratase 2 N-terminus LDH64_18630 PF11791 Aconitate B N-terminal domain LDH64_18635 PF01797 Transposase IS200 like LDH64_18640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_18640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDH64_18645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDH64_18645 PF00364 Biotin-requiring enzyme LDH64_18645 PF02817 e3 binding domain LDH64_18650 PF00456 Transketolase, thiamine diphosphate binding domain LDH64_18650 PF17831 Pyruvate dehydrogenase E1 component middle domain LDH64_18655 PF07729 FCD domain LDH64_18655 PF00392 Bacterial regulatory proteins, gntR family LDH64_18660 PF00324 Amino acid permease LDH64_18665 PF17113 Regulatory signalling modulator protein AmpE LDH64_18670 PF01510 N-acetylmuramoyl-L-alanine amidase LDH64_18675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LDH64_18675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LDH64_18680 PF07963 Prokaryotic N-terminal methylation motif LDH64_18685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDH64_18685 PF00437 Type II/IV secretion system protein LDH64_18690 PF00482 Type II secretion system (T2SS), protein F LDH64_18695 PF00478 IMP dehydrogenase / GMP reductase domain LDH64_18705 PF01121 Dephospho-CoA kinase LDH64_18710 PF07072 Cell division protein LDH64_18715 PF03884 DNA gyrase inhibitor YacG LDH64_18725 PF00665 Integrase core domain LDH64_18725 PF02796 Helix-turn-helix domain of resolvase LDH64_18730 PF01695 IstB-like ATP binding protein LDH64_18735 PF01119 DNA mismatch repair protein, C-terminal domain LDH64_18735 PF08676 MutL C terminal dimerisation domain LDH64_18745 PF00589 Phage integrase family LDH64_18745 PF13356 Arm DNA-binding domain LDH64_18755 PF03739 Lipopolysaccharide export system permease LptF/LptG LDH64_18760 PF03739 Lipopolysaccharide export system permease LptF/LptG LDH64_18765 PF02789 Cytosol aminopeptidase family, N-terminal domain LDH64_18765 PF00883 Cytosol aminopeptidase family, catalytic domain LDH64_18770 PF04364 DNA polymerase III chi subunit, HolC LDH64_18775 PF08264 Anticodon-binding domain of tRNA LDH64_18775 PF00133 tRNA synthetases class I (I, L, M and V) LDH64_18775 PF10458 Valyl tRNA synthetase tRNA binding arm LDH64_18780 PF00583 Acetyltransferase (GNAT) family LDH64_18785 PF06877 Regulator of ribonuclease activity B LDH64_18790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDH64_18790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDH64_18795 PF04074 YhcH/YjgK/YiaL LDH64_18805 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_18810 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_18810 PF12911 N-terminal TM domain of oligopeptide transport permease C LDH64_18815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_18815 PF00005 ABC transporter LDH64_18820 PF00005 ABC transporter LDH64_18820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDH64_18825 PF03477 ATP cone domain LDH64_18825 PF13597 Anaerobic ribonucleoside-triphosphate reductase LDH64_18835 PF00392 Bacterial regulatory proteins, gntR family LDH64_18835 PF07702 UTRA domain LDH64_18840 PF06754 Phosphonate metabolism protein PhnG LDH64_18845 PF05845 Bacterial phosphonate metabolism protein (PhnH) LDH64_18850 PF05861 Bacterial phosphonate metabolism protein (PhnI) LDH64_18855 PF06007 Phosphonate metabolism protein PhnJ LDH64_18860 PF00005 ABC transporter LDH64_18865 PF00005 ABC transporter LDH64_18870 PF07969 Amidohydrolase family LDH64_18880 PF12706 Beta-lactamase superfamily domain LDH64_18885 PF13460 NAD(P)H-binding LDH64_18900 PF00005 ABC transporter LDH64_18900 PF17912 MalK OB fold domain LDH64_18900 PF03459 TOBE domain LDH64_18905 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_18910 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_18915 PF13416 Bacterial extracellular solute-binding protein LDH64_18930 PF01541 GIY-YIG catalytic domain LDH64_18935 PF13508 Acetyltransferase (GNAT) domain LDH64_18940 PF02036 SCP-2 sterol transfer family LDH64_18945 PF01136 Peptidase family U32 LDH64_18950 PF01136 Peptidase family U32 LDH64_18955 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LDH64_18955 PF02321 Outer membrane efflux protein LDH64_18960 PF00873 AcrB/AcrD/AcrF family LDH64_18965 PF00529 HlyD membrane-fusion protein of T1SS LDH64_18965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_18970 PF00296 Luciferase-like monooxygenase LDH64_18980 PF01381 Helix-turn-helix LDH64_18990 PF03880 DbpA RNA binding domain LDH64_18990 PF00270 DEAD/DEAH box helicase LDH64_18990 PF12343 Cold shock protein DEAD box A LDH64_18990 PF00271 Helicase conserved C-terminal domain LDH64_19000 PF07719 Tetratricopeptide repeat LDH64_19000 PF13181 Tetratricopeptide repeat LDH64_19005 PF00013 KH domain LDH64_19005 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LDH64_19005 PF01138 3' exoribonuclease family, domain 1 LDH64_19005 PF03725 3' exoribonuclease family, domain 2 LDH64_19005 PF00575 S1 RNA binding domain LDH64_19015 PF00312 Ribosomal protein S15 LDH64_19020 PF01509 TruB family pseudouridylate synthase (N terminal domain) LDH64_19020 PF16198 tRNA pseudouridylate synthase B C-terminal domain LDH64_19020 PF09157 Pseudouridine synthase II TruB, C-terminal LDH64_19025 PF02033 Ribosome-binding factor A LDH64_19030 PF03144 Elongation factor Tu domain 2 LDH64_19030 PF00009 Elongation factor Tu GTP binding domain LDH64_19030 PF11987 Translation-initiation factor 2 LDH64_19030 PF04760 Translation initiation factor IF-2, N-terminal region LDH64_19030 PF08364 Bacterial translation initiation factor IF-2 associated region LDH64_19035 PF00575 S1 RNA binding domain LDH64_19035 PF08529 NusA N-terminal domain LDH64_19035 PF13184 NusA-like KH domain LDH64_19040 PF02576 RimP N-terminal domain LDH64_19040 PF17384 RimP C-terminal SH3 domain LDH64_19055 PF03840 Preprotein translocase SecG subunit LDH64_19060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDH64_19060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDH64_19060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDH64_19060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDH64_19065 PF00809 Pterin binding enzyme LDH64_19070 PF01434 Peptidase family M41 LDH64_19070 PF06480 FtsH Extracellular LDH64_19070 PF17862 AAA+ lid domain LDH64_19070 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_19075 PF01728 FtsJ-like methyltransferase LDH64_19080 PF01985 CRS1 / YhbY (CRM) domain LDH64_19085 PF03449 Transcription elongation factor, N-terminal LDH64_19085 PF01272 Transcription elongation factor, GreA/GreB, C-term LDH64_19090 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LDH64_19095 PF00486 Transcriptional regulatory protein, C terminal LDH64_19095 PF00072 Response regulator receiver domain LDH64_19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_19100 PF00512 His Kinase A (phospho-acceptor) domain LDH64_19100 PF00672 HAMP domain LDH64_19105 PF01018 GTP1/OBG LDH64_19105 PF01926 50S ribosome-binding GTPase LDH64_19110 PF00892 EamA-like transporter family LDH64_19115 PF01016 Ribosomal L27 protein LDH64_19120 PF00829 Ribosomal prokaryotic L21 protein LDH64_19125 PF00348 Polyprenyl synthetase LDH64_19135 PF13693 Winged helix-turn-helix DNA-binding LDH64_19140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDH64_19140 PF00056 lactate/malate dehydrogenase, NAD binding domain LDH64_19145 PF01316 Arginine repressor, DNA binding domain LDH64_19145 PF02863 Arginine repressor, C-terminal domain LDH64_19155 PF01225 Mur ligase family, catalytic domain LDH64_19155 PF02875 Mur ligase family, glutamate ligase domain LDH64_19155 PF08245 Mur ligase middle domain LDH64_19160 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LDH64_19165 PF00719 Inorganic pyrophosphatase LDH64_19170 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LDH64_19175 PF04357 TamB, inner membrane protein subunit of TAM complex LDH64_19180 PF01103 Surface antigen LDH64_19180 PF07244 Surface antigen variable number repeat LDH64_19180 PF17243 POTRA domain TamA domain 1 LDH64_19185 PF01625 Peptide methionine sulfoxide reductase LDH64_19190 PF00571 CBS domain LDH64_19190 PF01595 Cyclin M transmembrane N-terminal domain LDH64_19190 PF03471 Transporter associated domain LDH64_19195 PF06526 Protein of unknown function (DUF1107) LDH64_19200 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LDH64_19205 PF00459 Inositol monophosphatase family LDH64_19210 PF02872 5'-nucleotidase, C-terminal domain LDH64_19210 PF00149 Calcineurin-like phosphoesterase LDH64_19215 PF01814 Hemerythrin HHE cation binding domain LDH64_19215 PF04405 Domain of Unknown function (DUF542) LDH64_19220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDH64_19220 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDH64_19225 PF04225 Opacity-associated protein A LysM-like domain LDH64_19225 PF08525 Opacity-associated protein A N-terminal motif LDH64_19235 PF01797 Transposase IS200 like LDH64_19240 PF03948 Ribosomal protein L9, C-terminal domain LDH64_19240 PF01281 Ribosomal protein L9, N-terminal domain LDH64_19245 PF01084 Ribosomal protein S18 LDH64_19250 PF00436 Single-strand binding protein family LDH64_19255 PF01250 Ribosomal protein S6 LDH64_19260 PF00326 Prolyl oligopeptidase family LDH64_19265 PF00665 Integrase core domain LDH64_19265 PF02796 Helix-turn-helix domain of resolvase LDH64_19270 PF01695 IstB-like ATP binding protein LDH64_19280 PF03466 LysR substrate binding domain LDH64_19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_19285 PF02678 Pirin LDH64_19285 PF17954 Quercetinase C-terminal cupin domain LDH64_19295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDH64_19300 PF04348 LppC putative lipoprotein LDH64_19305 PF02021 Uncharacterised protein family UPF0102 LDH64_19310 PF13580 SIS domain LDH64_19315 PF04972 BON domain LDH64_19320 PF00912 Transglycosylase LDH64_19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_19330 PF00512 His Kinase A (phospho-acceptor) domain LDH64_19330 PF18415 Histidine kinase receptor ArcB trans-membrane domain LDH64_19330 PF01627 Hpt domain LDH64_19330 PF00989 PAS fold LDH64_19330 PF00072 Response regulator receiver domain LDH64_19335 PF16199 Radical_SAM C-terminal domain LDH64_19335 PF04055 Radical SAM superfamily LDH64_19340 PF00310 Glutamine amidotransferases class-II LDH64_19340 PF04898 Glutamate synthase central domain LDH64_19340 PF01645 Conserved region in glutamate synthase LDH64_19340 PF01493 GXGXG motif LDH64_19345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDH64_19345 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDH64_19355 PF04386 Stringent starvation protein B LDH64_19360 PF02798 Glutathione S-transferase, N-terminal domain LDH64_19360 PF00043 Glutathione S-transferase, C-terminal domain LDH64_19370 PF00380 Ribosomal protein S9/S16 LDH64_19375 PF00572 Ribosomal protein L13 LDH64_19380 PF03969 AFG1-like ATPase LDH64_19385 PF06295 Protein of unknown function (DUF1043) LDH64_19390 PF13180 PDZ domain LDH64_19390 PF00595 PDZ domain LDH64_19395 PF01797 Transposase IS200 like LDH64_19400 PF13180 PDZ domain LDH64_19405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDH64_19410 PF01722 BolA-like protein LDH64_19415 PF13466 STAS domain LDH64_19420 PF05494 MlaC protein LDH64_19425 PF02470 MlaD protein LDH64_19430 PF02405 Permease MlaE LDH64_19435 PF00005 ABC transporter LDH64_19440 PF01699 Sodium/calcium exchanger protein LDH64_19445 PF01380 SIS domain LDH64_19445 PF00571 CBS domain LDH64_19455 PF06835 Lipopolysaccharide-assembly, LptC-related LDH64_19460 PF03968 OstA-like protein LDH64_19465 PF00005 ABC transporter LDH64_19465 PF12399 Branched-chain amino acid ATP-binding cassette transporter LDH64_19470 PF04552 Sigma-54, DNA binding domain LDH64_19470 PF00309 Sigma-54 factor, Activator interacting domain (AID) LDH64_19470 PF04963 Sigma-54 factor, core binding domain LDH64_19480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDH64_19485 PF03668 P-loop ATPase protein family LDH64_19490 PF00381 PTS HPr component phosphorylation site LDH64_19495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDH64_19495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDH64_19500 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LDH64_19500 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LDH64_19505 PF01042 Endoribonuclease L-PSP LDH64_19515 PF00356 Bacterial regulatory proteins, lacI family LDH64_19520 PF00367 phosphotransferase system, EIIB LDH64_19520 PF02378 Phosphotransferase system, EIIC LDH64_19525 PF11941 Domain of unknown function (DUF3459) LDH64_19525 PF00128 Alpha amylase, catalytic domain LDH64_19530 PF01272 Transcription elongation factor, GreA/GreB, C-term LDH64_19530 PF14760 Rnk N-terminus LDH64_19535 PF07361 Cytochrome b562 LDH64_19545 PF01523 Putative modulator of DNA gyrase LDH64_19550 PF04751 Protein of unknown function (DUF615) LDH64_19555 PF01337 Barstar (barnase inhibitor) LDH64_19570 PF04632 Fusaric acid resistance protein family LDH64_19575 PF13533 Biotin-lipoyl like LDH64_19580 PF07869 Protein of unknown function (DUF1656) LDH64_19585 PF03466 LysR substrate binding domain LDH64_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_19590 PF03466 LysR substrate binding domain LDH64_19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_19605 PF18413 Neuraminidase-like domain LDH64_19605 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LDH64_19610 PF03534 Salmonella virulence plasmid 65kDa B protein LDH64_19610 PF12255 Insecticide toxin TcdB middle/C-terminal region LDH64_19610 PF12256 Insecticide toxin TcdB middle/N-terminal region LDH64_19635 PF05785 Rho-activating domain of cytotoxic necrotizing factor LDH64_19635 PF18807 Tripartite Tc toxins repeat LDH64_19640 PF14431 YwqJ-like deaminase LDH64_19640 PF18807 Tripartite Tc toxins repeat LDH64_19645 PF01523 Putative modulator of DNA gyrase LDH64_19650 PF00795 Carbon-nitrogen hydrolase LDH64_19655 PF13116 Protein of unknown function LDH64_19655 PF13502 AsmA-like C-terminal region LDH64_19660 PF10150 Ribonuclease E/G family LDH64_19660 PF00575 S1 RNA binding domain LDH64_19665 PF02545 Maf-like protein LDH64_19670 PF04093 rod shape-determining protein MreD LDH64_19675 PF04085 rod shape-determining protein MreC LDH64_19685 PF17157 Gammaproteobacterial periplasmic sensor domain LDH64_19685 PF00990 Diguanylate cyclase, GGDEF domain LDH64_19685 PF00563 EAL domain LDH64_19690 PF08240 Alcohol dehydrogenase GroES-like domain LDH64_19690 PF00107 Zinc-binding dehydrogenase LDH64_19695 PF00174 Oxidoreductase molybdopterin binding domain LDH64_19700 PF01794 Ferric reductase like transmembrane component LDH64_19705 PF01220 Dehydroquinase class II LDH64_19710 PF00364 Biotin-requiring enzyme LDH64_19715 PF02785 Biotin carboxylase C-terminal domain LDH64_19715 PF00289 Biotin carboxylase, N-terminal domain LDH64_19715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDH64_19725 PF06196 Protein of unknown function (DUF997) LDH64_19730 PF00474 Sodium:solute symporter family LDH64_19740 PF01207 Dihydrouridine synthase (Dus) LDH64_19745 PF02954 Bacterial regulatory protein, Fis family LDH64_19770 PF07690 Major Facilitator Superfamily LDH64_19775 PF02627 Carboxymuconolactone decarboxylase family LDH64_19780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDH64_19780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDH64_19785 PF00753 Metallo-beta-lactamase superfamily LDH64_19790 PF05433 Glycine zipper 2TM domain LDH64_19795 PF00313 'Cold-shock' DNA-binding domain LDH64_19800 PF00313 'Cold-shock' DNA-binding domain LDH64_19820 PF02798 Glutathione S-transferase, N-terminal domain LDH64_19825 PF00571 CBS domain LDH64_19825 PF01380 SIS domain LDH64_19830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_19830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_19840 PF02653 Branched-chain amino acid transport system / permease component LDH64_19845 PF00005 ABC transporter LDH64_19855 PF03279 Bacterial lipid A biosynthesis acyltransferase LDH64_19865 PF00999 Sodium/hydrogen exchanger family LDH64_19870 PF00860 Permease family LDH64_19875 PF04221 RelB antitoxin LDH64_19890 PF00005 ABC transporter LDH64_19895 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_19900 PF00296 Luciferase-like monooxygenase LDH64_19905 PF09084 NMT1/THI5 like LDH64_19910 PF03358 NADPH-dependent FMN reductase LDH64_19915 PF01791 DeoC/LacD family aldolase LDH64_19920 PF00294 pfkB family carbohydrate kinase LDH64_19925 PF05025 RbsD / FucU transport protein family LDH64_19930 PF02311 AraC-like ligand binding domain LDH64_19930 PF12833 Helix-turn-helix domain LDH64_19935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LDH64_19935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LDH64_19955 PF03527 RHS protein LDH64_19955 PF05593 RHS Repeat LDH64_19965 PF04717 Type VI secretion system, phage-baseplate injector LDH64_19995 PF05593 RHS Repeat LDH64_19995 PF03527 RHS protein LDH64_20010 PF04717 Type VI secretion system, phage-baseplate injector LDH64_20045 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_20045 PF07724 AAA domain (Cdc48 subfamily) LDH64_20045 PF17871 AAA lid domain LDH64_20045 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_20055 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LDH64_20075 PF05947 Type VI secretion system, TssF LDH64_20085 PF02219 Methylenetetrahydrofolate reductase LDH64_20090 PF00696 Amino acid kinase family LDH64_20090 PF03447 Homoserine dehydrogenase, NAD binding domain LDH64_20090 PF00742 Homoserine dehydrogenase LDH64_20100 PF01340 Met Apo-repressor, MetJ LDH64_20105 PF05360 yiaA/B two helix domain LDH64_20110 PF01197 Ribosomal protein L31 LDH64_20115 PF17764 3′ DNA-binding domain (3′BD) LDH64_20115 PF18074 Primosomal protein N C-terminal domain LDH64_20115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LDH64_20115 PF00270 DEAD/DEAH box helicase LDH64_20115 PF00271 Helicase conserved C-terminal domain LDH64_20125 PF00356 Bacterial regulatory proteins, lacI family LDH64_20130 PF05036 Sporulation related domain LDH64_20135 PF00227 Proteasome subunit LDH64_20140 PF00004 ATPase family associated with various cellular activities (AAA) LDH64_20140 PF10431 C-terminal, D2-small domain, of ClpB protein LDH64_20140 PF07724 AAA domain (Cdc48 subfamily) LDH64_20145 PF01040 UbiA prenyltransferase family LDH64_20150 PF03737 Aldolase/RraA LDH64_20165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDH64_20165 PF00529 HlyD membrane-fusion protein of T1SS LDH64_20170 PF03412 Peptidase C39 family LDH64_20170 PF00005 ABC transporter LDH64_20170 PF00664 ABC transporter transmembrane region LDH64_20180 PF06005 Cell division protein ZapB LDH64_20185 PF00230 Major intrinsic protein LDH64_20190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDH64_20190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDH64_20195 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LDH64_20200 PF00970 Oxidoreductase FAD-binding domain LDH64_20200 PF00175 Oxidoreductase NAD-binding domain LDH64_20205 PF05656 Protein of unknown function (DUF805) LDH64_20210 PF07305 Protein of unknown function (DUF1454) LDH64_20215 PF00121 Triosephosphate isomerase LDH64_20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDH64_20220 PF03466 LysR substrate binding domain LDH64_20225 PF02585 GlcNAc-PI de-N-acetylase LDH64_20230 PF03737 Aldolase/RraA LDH64_20235 PF00939 Sodium:sulfate symporter transmembrane region LDH64_20250 PF00365 Phosphofructokinase LDH64_20255 PF01545 Cation efflux family LDH64_20255 PF16916 Dimerisation domain of Zinc Transporter LDH64_20265 PF04754 Putative transposase, YhgA-like LDH64_20280 PF07813 LTXXQ motif family protein LDH64_20285 PF00486 Transcriptional regulatory protein, C terminal LDH64_20285 PF00072 Response regulator receiver domain LDH64_20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_20290 PF00672 HAMP domain LDH64_20290 PF00512 His Kinase A (phospho-acceptor) domain LDH64_20290 PF16527 Two-component sensor protein CpxA, periplasmic domain LDH64_20295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDH64_20295 PF12833 Helix-turn-helix domain LDH64_20295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDH64_20295 PF02805 Metal binding domain of Ada LDH64_20300 PF00588 SpoU rRNA Methylase family LDH64_20305 PF06426 Serine acetyltransferase, N-terminal LDH64_20305 PF00132 Bacterial transferase hexapeptide (six repeats) LDH64_20310 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDH64_20310 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDH64_20315 PF02556 Preprotein translocase subunit SecB LDH64_20320 PF00462 Glutaredoxin LDH64_20325 PF00581 Rhodanese-like domain LDH64_20330 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LDH64_20330 PF01676 Metalloenzyme superfamily LDH64_20335 PF01551 Peptidase family M23 LDH64_20345 PF08240 Alcohol dehydrogenase GroES-like domain LDH64_20345 PF00107 Zinc-binding dehydrogenase LDH64_20350 PF00155 Aminotransferase class I and II LDH64_20355 PF01370 NAD dependent epimerase/dehydratase family LDH64_20360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDH64_20365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LDH64_20370 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LDH64_20375 PF00535 Glycosyl transferase family 2 LDH64_20380 PF01467 Cytidylyltransferase-like LDH64_20385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDH64_20385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDH64_20385 PF06827 Zinc finger found in FPG and IleRS LDH64_20390 PF00471 Ribosomal protein L33 LDH64_20395 PF00830 Ribosomal L28 family LDH64_20400 PF04002 RadC-like JAB domain LDH64_20405 PF02441 Flavoprotein LDH64_20405 PF04127 DNA / pantothenate metabolism flavoprotein LDH64_20410 PF00692 dUTPase LDH64_20415 PF00440 Bacterial regulatory proteins, tetR family LDH64_20420 PF00156 Phosphoribosyl transferase domain LDH64_20425 PF03725 3' exoribonuclease family, domain 2 LDH64_20425 PF01138 3' exoribonuclease family, domain 1 LDH64_20430 PF03755 YicC-like family, N-terminal region LDH64_20430 PF08340 Domain of unknown function (DUF1732) LDH64_20435 PF03458 UPF0126 domain LDH64_20440 PF01653 NAD-dependent DNA ligase adenylation domain LDH64_20440 PF03120 NAD-dependent DNA ligase OB-fold domain LDH64_20445 PF00625 Guanylate kinase LDH64_20450 PF01192 RNA polymerase Rpb6 LDH64_20455 PF13291 ACT domain LDH64_20455 PF04607 Region found in RelA / SpoT proteins LDH64_20455 PF02824 TGS domain LDH64_20460 PF12105 SpoU, rRNA methylase, C-terminal LDH64_20460 PF00588 SpoU rRNA Methylase family LDH64_20465 PF17191 RecG wedge domain LDH64_20465 PF00270 DEAD/DEAH box helicase LDH64_20465 PF00271 Helicase conserved C-terminal domain LDH64_20475 PF03616 Sodium/glutamate symporter LDH64_20480 PF00860 Permease family LDH64_20485 PF05170 AsmA family LDH64_20490 PF00583 Acetyltransferase (GNAT) family LDH64_20490 PF09500 Putative thioesterase (yiiD_Cterm) LDH64_20495 PF00665 Integrase core domain LDH64_20495 PF02796 Helix-turn-helix domain of resolvase LDH64_20500 PF01695 IstB-like ATP binding protein LDH64_20505 PF02580 D-Tyr-tRNA(Tyr) deacylase LDH64_20510 PF03631 Virulence factor BrkB LDH64_20515 PF13419 Haloacid dehalogenase-like hydrolase LDH64_20520 PF03144 Elongation factor Tu domain 2 LDH64_20520 PF00009 Elongation factor Tu GTP binding domain LDH64_20520 PF00679 Elongation factor G C-terminus LDH64_20525 PF03951 Glutamine synthetase, beta-Grasp domain LDH64_20525 PF00120 Glutamine synthetase, catalytic domain LDH64_20530 PF01797 Transposase IS200 like LDH64_20535 PF00989 PAS fold LDH64_20535 PF00512 His Kinase A (phospho-acceptor) domain LDH64_20535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDH64_20540 PF00158 Sigma-54 interaction domain LDH64_20540 PF02954 Bacterial regulatory protein, Fis family LDH64_20540 PF00072 Response regulator receiver domain LDH64_20545 PF04055 Radical SAM superfamily LDH64_20545 PF06969 HemN C-terminal domain LDH64_20550 PF04220 Der GTPase activator (YihI) LDH64_20555 PF01926 50S ribosome-binding GTPase LDH64_20560 PF01797 Transposase IS200 like LDH64_20565 PF01612 3'-5' exonuclease LDH64_20565 PF00476 DNA polymerase family A LDH64_20565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDH64_20565 PF01367 5'-3' exonuclease, C-terminal SAM fold LDH64_20570 PF01323 DSBA-like thioredoxin domain LDH64_20575 PF01636 Phosphotransferase enzyme family LDH64_20580 PF06288 Protein of unknown function (DUF1040) LDH64_20585 PF12804 MobA-like NTP transferase domain LDH64_20590 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LDH64_20595 PF00872 Transposase, Mutator family LDH64_20620 PF00392 Bacterial regulatory proteins, gntR family LDH64_20620 PF07729 FCD domain LDH64_20625 PF07690 Major Facilitator Superfamily LDH64_20640 PF00294 pfkB family carbohydrate kinase LDH64_20645 PF05025 RbsD / FucU transport protein family LDH64_20650 PF02705 K+ potassium transporter LDH64_20655 PF17868 AAA lid domain LDH64_20655 PF12592 Protein of unknown function (DUF3763) LDH64_20655 PF07728 AAA domain (dynein-related subfamily) LDH64_20660 PF05762 VWA domain containing CoxE-like protein LDH64_20665 PF03590 Aspartate-ammonia ligase LDH64_20670 PF01037 Lrp/AsnC ligand binding domain LDH64_20675 PF00258 Flavodoxin LDH64_20680 PF13932 GidA associated domain LDH64_20680 PF01134 Glucose inhibited division protein A LDH64_20685 PF02527 rRNA small subunit methyltransferase G LDH64_20690 PF03899 ATP synthase I chain LDH64_20695 PF00119 ATP synthase A chain LDH64_20700 PF00137 ATP synthase subunit C LDH64_20705 PF00430 ATP synthase B/B' CF(0) LDH64_20710 PF00213 ATP synthase delta (OSCP) subunit LDH64_20715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDH64_20715 PF00306 ATP synthase alpha/beta chain, C terminal domain LDH64_20715 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDH64_20720 PF00231 ATP synthase LDH64_20725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDH64_20725 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDH64_20730 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LDH64_20730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDH64_20735 PF12804 MobA-like NTP transferase domain LDH64_20735 PF00132 Bacterial transferase hexapeptide (six repeats) LDH64_20740 PF01380 SIS domain LDH64_20745 PF12849 PBP superfamily domain LDH64_20750 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_20755 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_20760 PF00005 ABC transporter LDH64_20765 PF01895 PhoU domain LDH64_20775 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDH64_20780 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_20785 PF00528 Binding-protein-dependent transport system inner membrane component LDH64_20790 PF13419 Haloacid dehalogenase-like hydrolase LDH64_20800 PF00860 Permease family LDH64_20825 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LDH64_20825 PF07055 Enoyl reductase FAD binding domain LDH64_20825 PF12241 Trans-2-enoyl-CoA reductase catalytic region LDH64_20830 PF10396 GTP-binding protein TrmE N-terminus LDH64_20830 PF12631 MnmE helical domain LDH64_20830 PF01926 50S ribosome-binding GTPase LDH64_20835 PF14849 YidC periplasmic domain LDH64_20835 PF02096 60Kd inner membrane protein LDH64_20840 PF01809 Putative membrane protein insertion efficiency factor LDH64_20845 PF00825 Ribonuclease P LDH64_20850 PF00468 Ribosomal protein L34 LDH64_20885 PF13091 PLD-like domain LDH64_20895 PF04754 Putative transposase, YhgA-like LDH64_20915 PF13614 AAA domain LDH64_20915 PF18607 ParA helix turn helix domain LDH64_20920 PF08775 ParB family LDH64_20920 PF02195 ParB-like nuclease domain LDH64_20940 PF01555 DNA methylase LDH64_20950 PF07128 Protein of unknown function (DUF1380) LDH64_20965 PF06006 Bacterial protein of unknown function (DUF905) LDH64_20970 PF02195 ParB-like nuclease domain LDH64_20975 PF02796 Helix-turn-helix domain of resolvase LDH64_20975 PF00665 Integrase core domain LDH64_20980 PF01695 IstB-like ATP binding protein LDH64_21010 PF06445 GyrI-like small molecule binding domain LDH64_21010 PF12833 Helix-turn-helix domain LDH64_21015 PF02753 Pili assembly chaperone PapD, C-terminal domain LDH64_21015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LDH64_21020 PF13954 PapC N-terminal domain LDH64_21020 PF00577 Outer membrane usher protein LDH64_21020 PF13953 PapC C-terminal domain LDH64_21025 PF09255 Caf1 Capsule antigen LDH64_21045 PF11775 Cobalamin biosynthesis protein CobT VWA domain LDH64_21045 PF06213 Cobalamin biosynthesis protein CobT LDH64_21055 PF02811 PHP domain LDH64_21055 PF14579 Helix-hairpin-helix motif LDH64_21055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDH64_21055 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDH64_21085 PF01367 5'-3' exonuclease, C-terminal SAM fold LDH64_21085 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDH64_21095 PF00154 recA bacterial DNA recombination protein LDH64_21140 PF01051 Initiator Replication protein LDH64_21220 PF17191 RecG wedge domain LDH64_21220 PF00271 Helicase conserved C-terminal domain LDH64_21220 PF00270 DEAD/DEAH box helicase LDH64_21225 PF02195 ParB-like nuclease domain LDH64_21225 PF17762 HTH domain found in ParB protein LDH64_21230 PF02195 ParB-like nuclease domain LDH64_21230 PF17762 HTH domain found in ParB protein LDH64_21235 PF03412 Peptidase C39 family LDH64_21235 PF00005 ABC transporter LDH64_21235 PF00664 ABC transporter transmembrane region LDH64_21360 PF08400 Prophage tail fibre N-terminal LDH64_21360 PF03335 Phage tail fibre repeat LDH64_21360 PF07484 Phage Tail Collar Domain LDH64_21360 PF08400 Prophage tail fibre N-terminal LDH64_21360 PF07484 Phage Tail Collar Domain LDH64_21360 PF03335 Phage tail fibre repeat LDH64_21365 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LDH64_21370 PF01695 IstB-like ATP binding protein LDH64_21375 PF02796 Helix-turn-helix domain of resolvase LDH64_21375 PF00665 Integrase core domain LDH64_21400 PF00872 Transposase, Mutator family LDH64_21410 PF02371 Transposase IS116/IS110/IS902 family LDH64_21410 PF01548 Transposase LDH64_21435 PF13091 PLD-like domain LDH64_21445 PF04754 Putative transposase, YhgA-like LDH64_21450 PF02796 Helix-turn-helix domain of resolvase LDH64_21450 PF00239 Resolvase, N terminal domain LDH64_21465 PF13614 AAA domain LDH64_21465 PF18607 ParA helix turn helix domain LDH64_21470 PF08775 ParB family LDH64_21470 PF02195 ParB-like nuclease domain LDH64_21490 PF01555 DNA methylase LDH64_21500 PF07128 Protein of unknown function (DUF1380) LDH64_21515 PF06006 Bacterial protein of unknown function (DUF905) LDH64_21525 PF00665 Integrase core domain LDH64_21525 PF02796 Helix-turn-helix domain of resolvase LDH64_21530 PF01695 IstB-like ATP binding protein LDH64_21535 PF01815 Rop protein LDH64_21555 PF01278 Omptin family LDH64_21565 PF05973 Phage derived protein Gp49-like (DUF891) LDH64_21590 PF00892 EamA-like transporter family LDH64_21600 PF05662 Coiled stalk of trimeric autotransporter adhesin LDH64_21600 PF05658 Head domain of trimeric autotransporter adhesin LDH64_21600 PF03895 YadA-like membrane anchor domain LDH64_21615 PF01526 Tn3 transposase DDE domain LDH64_21615 PF13700 Domain of unknown function (DUF4158) LDH64_21620 PF01526 Tn3 transposase DDE domain LDH64_21620 PF13700 Domain of unknown function (DUF4158) LDH64_21620 PF01526 Tn3 transposase DDE domain LDH64_21620 PF13700 Domain of unknown function (DUF4158) LDH64_21625 PF00239 Resolvase, N terminal domain LDH64_21625 PF02796 Helix-turn-helix domain of resolvase LDH64_21655 PF00665 Integrase core domain LDH64_21665 PF05932 Tir chaperone protein (CesT) family LDH64_21670 PF09020 YopE, N terminal LDH64_21670 PF03545 Yersinia virulence determinant (YopE) LDH64_21680 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LDH64_21700 PF02195 ParB-like nuclease domain LDH64_21700 PF18090 Centromere-binding protein HTH domain LDH64_21705 PF13614 AAA domain LDH64_21720 PF05818 Enterobacterial TraT complement resistance protein LDH64_21725 PF05818 Enterobacterial TraT complement resistance protein LDH64_21740 PF03543 Yersinia/Haemophilus virulence surface antigen LDH64_21745 PF05932 Tir chaperone protein (CesT) family LDH64_21775 PF12468 Type III secretion system leucine rich repeat protein LDH64_21790 PF05844 YopD protein LDH64_21795 PF04888 Secretion system effector C (SseC) like family LDH64_21800 PF07720 Tetratricopeptide repeat LDH64_21805 PF04792 V antigen (LcrV) protein LDH64_21810 PF07216 LcrG protein LDH64_21815 PF09621 Type III secretion system regulator (LcrR) LDH64_21820 PF00771 FHIPEP family LDH64_21830 PF09474 Type III secretion system YscX (type_III_YscX) LDH64_21840 PF09059 TyeA LDH64_21845 PF07201 HrpJ-like domain LDH64_21850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDH64_21850 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDH64_21850 PF18269 T3SS EscN ATPase C-terminal domain LDH64_21855 PF07321 Type III secretion protein YscO LDH64_21860 PF02120 Flagellar hook-length control protein FliK LDH64_21865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LDH64_21870 PF00813 FliP family LDH64_21875 PF01313 Bacterial export proteins, family 3 LDH64_21880 PF01311 Bacterial export proteins, family 1 LDH64_21885 PF01312 FlhB HrpN YscU SpaS Family LDH64_21890 PF09619 Type III secretion system lipoprotein chaperone (YscW) LDH64_21895 PF02311 AraC-like ligand binding domain LDH64_21895 PF12833 Helix-turn-helix domain LDH64_21900 PF17551 Family of unknown function (DUF5463) LDH64_21905 PF05932 Tir chaperone protein (CesT) family LDH64_21910 PF00263 Bacterial type II and III secretion system protein LDH64_21910 PF03958 Bacterial type II/III secretion system short domain LDH64_21915 PF16697 Inner membrane component of T3SS, cytoplasmic domain LDH64_21915 PF16693 Inner membrane component of T3SS, periplasmic domain LDH64_21920 PF08988 Type III secretion system, cytoplasmic E component of needle LDH64_21925 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF LDH64_21930 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) LDH64_21935 PF09025 YopR, type III needle-polymerisation regulator LDH64_21940 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI LDH64_21945 PF01514 Secretory protein of YscJ/FliF family LDH64_21950 PF06578 YOP proteins translocation protein K (YscK) LDH64_21955 PF02108 Flagellar assembly protein FliH LDH64_21960 PF09013 YopH, N-terminal LDH64_21975 PF00102 Protein-tyrosine phosphatase LDH64_21975 PF09013 YopH, N-terminal LDH64_21995 PF03421 YopJ Serine/Threonine acetyltransferase LDH64_22000 PF00069 Protein kinase domain LDH64_22000 PF09632 Rac1-binding domain LDH64_22025 PF02387 IncFII RepA protein family LDH64_22040 PF10723 Replication regulatory protein RepB