YPC_0002 SM00344 helix_turn_helix ASNC type YPC_0004 SM00327 von Willebrand factor (vWF) type A domain YPC_0005 SM00382 ATPases associated with a variety of cellular activities YPC_0011 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_0011 SM00895 YPC_0011 YPC_0027 SM01018 B12 binding domain YPC_0028 SM00912 haemagglutination activity domain YPC_0039 SM00382 ATPases associated with a variety of cellular activities YPC_0050 SM00382 ATPases associated with a variety of cellular activities YPC_0054 SM00420 helix_turn_helix, Deoxyribose operon repressor YPC_0054 SM01134 YPC_0054 YPC_0056 SM00450 Rhodanese Homology Domain YPC_0057 SM00421 helix_turn_helix, Lux Regulon YPC_0068 SM00899 YPC_0068 YPC_0070 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_0070 SM00732 Likely ribonuclease with RNase H fold. YPC_0072 SM00448 cheY-homologous receiver domain YPC_0072 SM00862 Transcriptional regulatory protein, C terminal YPC_0073 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_0073 SM00387 Histidine kinase-like ATPases YPC_0073 SM00388 His Kinase A (phosphoacceptor) domain YPC_0076 SM00363 S4 RNA-binding domain YPC_0103 SM00354 helix_turn _helix lactose operon repressor YPC_0111 SM00100 Cyclic nucleotide-monophosphate binding domain YPC_0111 SM00419 helix_turn_helix, cAMP Regulatory protein YPC_0119 SM00062 Bacterial periplasmic substrate-binding proteins YPC_0120 SM00382 ATPases associated with a variety of cellular activities YPC_0140 SM00838 Elongation factor G C-terminus YPC_0140 SM00889 Elongation factor G, domain IV YPC_0144 SM01321 YPC_0144 YPC_0147 SM01403 YPC_0147 YPC_0151 SM01382 YPC_0151 YPC_0151 SM01383 YPC_0151 YPC_0154 SM00322 K homology RNA-binding domain YPC_0158 SM01374 YPC_0158 YPC_0159 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPC_0172 SM00363 S4 RNA-binding domain YPC_0172 SM01390 YPC_0172 YPC_0173 SM00662 RNA polymerases D YPC_0175 SM00422 helix_turn_helix, mercury resistance YPC_0188 SM00382 ATPases associated with a variety of cellular activities YPC_0196 SM00487 DEAD-like helicases superfamily YPC_0196 SM00490 helicase superfamily c-terminal domain YPC_0198 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPC_0198 SM00954 Region found in RelA / SpoT proteins YPC_0199 SM01409 YPC_0199 YPC_0200 SM00072 Guanylate kinase homologues. YPC_0201 SM00532 Ligase N family YPC_0212 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain YPC_0212 SM01232 YPC_0212 YPC_0220 SM00829 Enoylreductase YPC_0225 SM00450 Rhodanese Homology Domain YPC_0230 SM00971 Serine acetyltransferase, N-terminal YPC_0232 SM00342 helix_turn_helix, arabinose operon control protein YPC_0233 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_0233 SM00387 Histidine kinase-like ATPases YPC_0233 SM00388 His Kinase A (phosphoacceptor) domain YPC_0234 SM00448 cheY-homologous receiver domain YPC_0234 SM00862 Transcriptional regulatory protein, C terminal YPC_0257 SM01321 YPC_0257 YPC_0260 SM00382 ATPases associated with a variety of cellular activities YPC_0269 SM00382 ATPases associated with a variety of cellular activities YPC_0269 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_0272 SM00354 helix_turn _helix lactose operon repressor YPC_0273 SM00487 DEAD-like helicases superfamily YPC_0273 SM00490 helicase superfamily c-terminal domain YPC_0289 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPC_0295 SM00382 ATPases associated with a variety of cellular activities YPC_0316 SM00382 ATPases associated with a variety of cellular activities YPC_0321 SM00382 ATPases associated with a variety of cellular activities YPC_0337 SM00507 HNH nucleases YPC_0353 SM00487 DEAD-like helicases superfamily YPC_0353 SM00490 helicase superfamily c-terminal domain YPC_0355 SM00357 Cold shock protein domain YPC_0355 SM00382 ATPases associated with a variety of cellular activities YPC_0355 SM00959 Rho termination factor, N-terminal domain YPC_0359 SM00984 UDP binding domain YPC_0375 SM01321 YPC_0375 YPC_0384 SM01219 YPC_0384 YPC_0400 SM00341 Helicase and RNase D C-terminal YPC_0400 SM00487 DEAD-like helicases superfamily YPC_0400 SM00490 helicase superfamily c-terminal domain YPC_0400 SM00956 YPC_0400 YPC_0421 SM00382 ATPases associated with a variety of cellular activities YPC_0421 SM00962 SRP54-type protein, GTPase domain YPC_0421 SM00963 SRP54-type protein, helical bundle domain YPC_0422 SM00382 ATPases associated with a variety of cellular activities YPC_0427 SM01321 YPC_0427 YPC_0433 SM00382 ATPases associated with a variety of cellular activities YPC_0434 SM00382 ATPases associated with a variety of cellular activities YPC_0446 SM00382 ATPases associated with a variety of cellular activities YPC_0467 SM00382 ATPases associated with a variety of cellular activities YPC_0469 SM01004 Delta-aminolevulinic acid dehydratase YPC_0470 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPC_0470 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPC_0477 SM01321 YPC_0477 YPC_0493 SM00382 ATPases associated with a variety of cellular activities YPC_0500 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPC_0500 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPC_0501 SM00649 Ribosomal protein L11/L12 YPC_0506 SM00663 RNA polymerase I subunit A N-terminus YPC_0507 SM01321 YPC_0507 YPC_0522 SM00411 bacterial (prokaryotic) histone like domain YPC_0524 SM01209 YPC_0524 YPC_0524 SM01210 YPC_0524 YPC_0525 SM00798 AICARFT/IMPCHase bienzyme YPC_0525 SM00851 MGS-like domain YPC_0534 SM00382 ATPases associated with a variety of cellular activities YPC_0536 SM00823 Phosphopantetheine attachment site YPC_0536 SM00825 Beta-ketoacyl synthase YPC_0541 SM00364 Leucine-rich repeats, bacterial type YPC_0541 SM00369 Leucine-rich repeats, typical (most populated) subfamily YPC_0542 SM00364 Leucine-rich repeats, bacterial type YPC_0544 SM00364 Leucine-rich repeats, bacterial type YPC_0553 SM00052 Putative diguanylate phosphodiesterase YPC_0553 SM00091 PAS domain YPC_0553 SM00267 diguanylate cyclase YPC_0556 SM01387 YPC_0556 YPC_0560 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_0560 SM00322 K homology RNA-binding domain YPC_0567 SM00382 ATPases associated with a variety of cellular activities YPC_0569 SM01103 YPC_0569 YPC_0573 SM00448 cheY-homologous receiver domain YPC_0573 SM00862 Transcriptional regulatory protein, C terminal YPC_0574 SM00387 Histidine kinase-like ATPases YPC_0574 SM00388 His Kinase A (phosphoacceptor) domain YPC_0594 SM00116 Domain in cystathionine beta-synthase and other proteins. YPC_0594 SM01091 Transporter associated domain YPC_0603 SM01321 YPC_0603 YPC_0612 SM00382 ATPases associated with a variety of cellular activities YPC_0617 SM00967 RNA 2'-O ribose methyltransferase substrate binding YPC_0619 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_0619 SM00357 Cold shock protein domain YPC_0619 SM00955 YPC_0619 YPC_0621 SM00788 Adenylosuccinate synthetase YPC_0623 SM00244 prohibitin homologues YPC_0624 SM00244 prohibitin homologues YPC_0628 SM00853 MutL C terminal dimerisation domain YPC_0628 SM01340 YPC_0628 YPC_0629 SM00257 Lysin motif YPC_0629 SM00646 YPC_0629 YPC_0636 SM00479 YPC_0636 YPC_0647 SM00841 Elongation factor P, C-terminal YPC_0647 SM01185 YPC_0647 YPC_0651 SM00883 Chaperonin 10 Kd subunit YPC_0658 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPC_0663 SM01276 YPC_0663 YPC_0670 SM00342 helix_turn_helix, arabinose operon control protein YPC_0672 SM00342 helix_turn_helix, arabinose operon control protein YPC_0676 SM01007 Class II Aldolase and Adducin N-terminal domain YPC_0683 SM01005 Alanine racemase, C-terminal domain YPC_0684 SM00382 ATPases associated with a variety of cellular activities YPC_0685 SM00829 Enoylreductase YPC_0692 SM00563 Phosphate acyltransferases YPC_0695 SM00869 Autotransporter beta-domain YPC_0697 SM00060 Fibronectin type 3 domain YPC_0718 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_0727 SM00382 ATPases associated with a variety of cellular activities YPC_0741 SM00382 ATPases associated with a variety of cellular activities YPC_0749 SM00342 helix_turn_helix, arabinose operon control protein YPC_0754 SM00387 Histidine kinase-like ATPases YPC_0754 SM00388 His Kinase A (phosphoacceptor) domain YPC_0754 SM00448 cheY-homologous receiver domain YPC_0755 SM00421 helix_turn_helix, Lux Regulon YPC_0755 SM00448 cheY-homologous receiver domain YPC_0762 SM00382 ATPases associated with a variety of cellular activities YPC_0774 SM00382 ATPases associated with a variety of cellular activities YPC_0775 SM00382 ATPases associated with a variety of cellular activities YPC_0784 SM00869 Autotransporter beta-domain YPC_0793 SM00354 helix_turn _helix lactose operon repressor YPC_0801 SM01006 Siderophore biosynthesis protein domain YPC_0810 SM00421 helix_turn_helix, Lux Regulon YPC_0824 SM00382 ATPases associated with a variety of cellular activities YPC_0824 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_0841 SM00382 ATPases associated with a variety of cellular activities YPC_0847 SM00478 endonuclease III YPC_0847 SM00525 YPC_0847 YPC_0854 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_0856 SM01152 YPC_0856 YPC_0860 SM00382 ATPases associated with a variety of cellular activities YPC_0863 SM00732 Likely ribonuclease with RNase H fold. YPC_0870 SM00731 SprT homologues. YPC_0877 SM00861 Transketolase, pyrimidine binding domain YPC_0879 SM01321 YPC_0879 YPC_0880 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPC_0895 SM01011 Aminopeptidase P, N-terminal domain YPC_0912 SM00448 cheY-homologous receiver domain YPC_0912 SM00862 Transcriptional regulatory protein, C terminal YPC_0913 SM00387 Histidine kinase-like ATPases YPC_0913 SM00388 His Kinase A (phosphoacceptor) domain YPC_0926 SM00530 Helix-turn-helix XRE-family like proteins YPC_0928 SM00530 Helix-turn-helix XRE-family like proteins YPC_0929 SM00778 Zinc-binding domain of primase-helicase YPC_0929 SM00885 D5 N terminal like YPC_0955 SM00382 ATPases associated with a variety of cellular activities YPC_0956 SM00382 ATPases associated with a variety of cellular activities YPC_0964 SM00354 helix_turn _helix lactose operon repressor YPC_0971 SM00354 helix_turn _helix lactose operon repressor YPC_0988 SM00420 helix_turn_helix, Deoxyribose operon repressor YPC_0988 SM01134 YPC_0988 YPC_0992 SM01321 YPC_0992 YPC_0994 SM00382 ATPases associated with a variety of cellular activities YPC_0997 SM00869 Autotransporter beta-domain YPC_1002 SM00947 Carbonic anhydrase YPC_1006 SM00382 ATPases associated with a variety of cellular activities YPC_1018 SM00862 Transcriptional regulatory protein, C terminal YPC_1021 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPC_1021 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_1023 SM00849 Metallo-beta-lactamase superfamily YPC_1028 SM00354 helix_turn _helix lactose operon repressor YPC_1039 SM00927 DNA mismatch repair enzyme MutH YPC_1041 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YPC_1054 SM00646 YPC_1054 YPC_1057 SM00925 MltA specific insert domain YPC_1066 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPC_1066 SM00475 5'-3' exonuclease YPC_1071 SM01321 YPC_1071 YPC_1077 SM01321 YPC_1077 YPC_1080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPC_1090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPC_1092 SM00935 Outer membrane protein (OmpH-like) YPC_1098 SM00481 DNA polymerase alpha chain like domain YPC_1101 SM00977 TilS substrate C-terminal domain YPC_1105 SM01322 YPC_1105 YPC_1113 SM00382 ATPases associated with a variety of cellular activities YPC_1113 SM00930 YPC_1113 YPC_1124 SM00257 Lysin motif YPC_1125 SM00849 Metallo-beta-lactamase superfamily YPC_1128 SM00479 YPC_1128 YPC_1133 SM00382 ATPases associated with a variety of cellular activities YPC_1141 SM00778 Zinc-binding domain of primase-helicase YPC_1150 SM01321 YPC_1150 YPC_1166 SM00861 Transketolase, pyrimidine binding domain YPC_1169 SM00881 CoA binding domain YPC_1188 SM00855 Phosphoglycerate mutase family YPC_1197 SM00382 ATPases associated with a variety of cellular activities YPC_1203 SM00382 ATPases associated with a variety of cellular activities YPC_1207 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_1207 SM00876 Biotin and Thiamin Synthesis associated domain YPC_1211 SM00382 ATPases associated with a variety of cellular activities YPC_1212 SM00487 DEAD-like helicases superfamily YPC_1212 SM00490 helicase superfamily c-terminal domain YPC_1216 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_1223 SM01321 YPC_1223 YPC_1237 SM00091 PAS domain YPC_1237 SM00387 Histidine kinase-like ATPases YPC_1237 SM00388 His Kinase A (phosphoacceptor) domain YPC_1238 SM00382 ATPases associated with a variety of cellular activities YPC_1238 SM00448 cheY-homologous receiver domain YPC_1246 SM00382 ATPases associated with a variety of cellular activities YPC_1249 SM00487 DEAD-like helicases superfamily YPC_1249 SM00490 helicase superfamily c-terminal domain YPC_1265 SM00046 Diacylglycerol kinase catalytic domain (presumed) YPC_1269 SM00448 cheY-homologous receiver domain YPC_1269 SM00862 Transcriptional regulatory protein, C terminal YPC_1270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_1270 SM00387 Histidine kinase-like ATPases YPC_1270 SM00388 His Kinase A (phosphoacceptor) domain YPC_1275 SM00382 ATPases associated with a variety of cellular activities YPC_1276 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_1282 SM00924 MgtE intracellular N domain YPC_1289 SM00382 ATPases associated with a variety of cellular activities YPC_1298 SM01321 YPC_1298 YPC_1309 SM01130 YPC_1309 YPC_1312 SM01321 YPC_1312 YPC_1325 SM00382 ATPases associated with a variety of cellular activities YPC_1336 SM00421 helix_turn_helix, Lux Regulon YPC_1336 SM00448 cheY-homologous receiver domain YPC_1339 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPC_1344 SM00919 Malic enzyme, NAD binding domain YPC_1344 SM01274 YPC_1344 YPC_1350 SM00869 Autotransporter beta-domain YPC_1355 SM01130 YPC_1355 YPC_1357 SM00364 Leucine-rich repeats, bacterial type YPC_1357 SM00369 Leucine-rich repeats, typical (most populated) subfamily YPC_1367 SM00382 ATPases associated with a variety of cellular activities YPC_1370 SM00448 cheY-homologous receiver domain YPC_1370 SM00862 Transcriptional regulatory protein, C terminal YPC_1371 SM00387 Histidine kinase-like ATPases YPC_1371 SM00388 His Kinase A (phosphoacceptor) domain YPC_1373 SM00327 von Willebrand factor (vWF) type A domain YPC_1379 SM00450 Rhodanese Homology Domain YPC_1380 SM00382 ATPases associated with a variety of cellular activities YPC_1382 SM00448 cheY-homologous receiver domain YPC_1382 SM00862 Transcriptional regulatory protein, C terminal YPC_1383 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_1383 SM00387 Histidine kinase-like ATPases YPC_1383 SM00388 His Kinase A (phosphoacceptor) domain YPC_1387 SM00382 ATPases associated with a variety of cellular activities YPC_1389 SM01321 YPC_1389 YPC_1395 SM00771 ZipA, C-terminal domain (FtsZ-binding) YPC_1396 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPC_1396 SM00292 breast cancer carboxy-terminal domain YPC_1396 SM00532 Ligase N family YPC_1403 SM01321 YPC_1403 YPC_1431 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPC_1436 SM00382 ATPases associated with a variety of cellular activities YPC_1442 SM00421 helix_turn_helix, Lux Regulon YPC_1452 SM00382 ATPases associated with a variety of cellular activities YPC_1452 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_1466 SM00382 ATPases associated with a variety of cellular activities YPC_1485 SM00382 ATPases associated with a variety of cellular activities YPC_1499 SM00855 Phosphoglycerate mutase family YPC_1500 SM00463 Small MutS-related domain YPC_1509 SM00825 Beta-ketoacyl synthase YPC_1516 SM00342 helix_turn_helix, arabinose operon control protein YPC_1518 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPC_1529 SM00062 Bacterial periplasmic substrate-binding proteins YPC_1532 SM00382 ATPases associated with a variety of cellular activities YPC_1534 SM00052 Putative diguanylate phosphodiesterase YPC_1543 SM00354 helix_turn _helix lactose operon repressor YPC_1554 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPC_1564 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YPC_1565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPC_1565 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YPC_1580 SM00354 helix_turn _helix lactose operon repressor YPC_1597 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPC_1606 SM00382 ATPases associated with a variety of cellular activities YPC_1608 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPC_1608 SM00091 PAS domain YPC_1608 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPC_1609 SM00382 ATPases associated with a variety of cellular activities YPC_1611 SM00062 Bacterial periplasmic substrate-binding proteins YPC_1611 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPC_1623 SM00829 Enoylreductase YPC_1625 SM00382 ATPases associated with a variety of cellular activities YPC_1627 SM00354 helix_turn _helix lactose operon repressor YPC_1629 SM01329 YPC_1629 YPC_1636 SM00912 haemagglutination activity domain YPC_1648 SM00382 ATPases associated with a variety of cellular activities YPC_1650 SM00354 helix_turn _helix lactose operon repressor YPC_1670 SM00421 helix_turn_helix, Lux Regulon YPC_1677 SM00450 Rhodanese Homology Domain YPC_1680 SM00421 helix_turn_helix, Lux Regulon YPC_1688 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_1689 SM00363 S4 RNA-binding domain YPC_1695 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPC_1696 SM00822 YPC_1696 YPC_1698 SM00825 Beta-ketoacyl synthase YPC_1700 SM01321 YPC_1700 YPC_1709 SM01321 YPC_1709 YPC_1724 SM00487 DEAD-like helicases superfamily YPC_1724 SM00490 helicase superfamily c-terminal domain YPC_1724 SM00982 YPC_1724 YPC_1724 SM01058 CarD-like/TRCF domain YPC_1727 SM00382 ATPases associated with a variety of cellular activities YPC_1734 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. YPC_1735 SM00387 Histidine kinase-like ATPases YPC_1735 SM00388 His Kinase A (phosphoacceptor) domain YPC_1736 SM00448 cheY-homologous receiver domain YPC_1736 SM00862 Transcriptional regulatory protein, C terminal YPC_1743 SM01329 YPC_1743 YPC_1744 SM00354 helix_turn _helix lactose operon repressor YPC_1746 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPC_1746 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPC_1757 SM00344 helix_turn_helix ASNC type YPC_1760 SM00829 Enoylreductase YPC_1761 SM01038 Beta galactosidase small chain YPC_1762 SM00357 Cold shock protein domain YPC_1767 SM00831 Cation transporter/ATPase, N-terminus YPC_1774 SM00073 Histidine Phosphotransfer domain YPC_1774 SM00260 Two component signalling adaptor domain YPC_1774 SM00387 Histidine kinase-like ATPases YPC_1774 SM01231 YPC_1774 YPC_1775 SM00260 Two component signalling adaptor domain YPC_1780 SM00869 Autotransporter beta-domain YPC_1783 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPC_1783 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_1783 SM00319 Homologues of the ligand binding domain of Tar YPC_1784 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPC_1784 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_1784 SM00319 Homologues of the ligand binding domain of Tar YPC_1785 SM00138 Methyltransferase, chemotaxis proteins YPC_1786 SM00448 cheY-homologous receiver domain YPC_1787 SM00448 cheY-homologous receiver domain YPC_1791 SM00644 YPC_1791 YPC_1795 SM01005 Alanine racemase, C-terminal domain YPC_1800 SM00382 ATPases associated with a variety of cellular activities YPC_1807 SM00382 ATPases associated with a variety of cellular activities YPC_1808 SM00382 ATPases associated with a variety of cellular activities YPC_1811 SM00155 Phospholipase D. Active site motifs. YPC_1829 SM00749 bacterial OsmY and nodulation domain YPC_1838 SM00481 DNA polymerase alpha chain like domain YPC_1841 SM00363 S4 RNA-binding domain YPC_1843 SM00822 YPC_1843 YPC_1848 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPC_1848 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPC_1848 SM00493 YPC_1848 YPC_1853 SM00014 Acid phosphatase homologues YPC_1855 SM00028 Tetratricopeptide repeats YPC_1857 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YPC_1860 SM01007 Class II Aldolase and Adducin N-terminal domain YPC_1865 SM00357 Cold shock protein domain YPC_1865 SM00955 YPC_1865 YPC_1868 SM00478 endonuclease III YPC_1868 SM00525 YPC_1868 YPC_1872 SM00342 helix_turn_helix, arabinose operon control protein YPC_1883 SM00382 ATPases associated with a variety of cellular activities YPC_1887 SM00382 ATPases associated with a variety of cellular activities YPC_1889 SM00342 helix_turn_helix, arabinose operon control protein YPC_1904 SM00354 helix_turn _helix lactose operon repressor YPC_1922 SM00098 Alkaline phosphatase homologues YPC_1924 SM00100 Cyclic nucleotide-monophosphate binding domain YPC_1924 SM00419 helix_turn_helix, cAMP Regulatory protein YPC_1929 SM01002 Alanine dehydrogenase/PNT, C-terminal domain YPC_1929 SM01003 Alanine dehydrogenase/PNT, N-terminal domain YPC_1934 SM00448 cheY-homologous receiver domain YPC_1934 SM00862 Transcriptional regulatory protein, C terminal YPC_1935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_1935 SM00387 Histidine kinase-like ATPases YPC_1935 SM00388 His Kinase A (phosphoacceptor) domain YPC_1937 SM01321 YPC_1937 YPC_1948 SM00020 Trypsin-like serine protease YPC_1949 SM00530 Helix-turn-helix XRE-family like proteins YPC_1951 SM00382 ATPases associated with a variety of cellular activities YPC_1951 SM00487 DEAD-like helicases superfamily YPC_1951 SM00490 helicase superfamily c-terminal domain YPC_1951 SM00847 Helicase associated domain (HA2) Add an annotation YPC_1963 SM00890 Domain of unknown function YPC_1967 SM00422 helix_turn_helix, mercury resistance YPC_1971 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPC_1974 SM01321 YPC_1974 YPC_1975 SM00091 PAS domain YPC_1975 SM00382 ATPases associated with a variety of cellular activities YPC_1977 SM00953 YPC_1977 YPC_1984 SM00382 ATPases associated with a variety of cellular activities YPC_1985 SM01321 YPC_1985 YPC_1999 SM00363 S4 RNA-binding domain YPC_2005 SM00347 helix_turn_helix multiple antibiotic resistance protein YPC_2012 SM00479 YPC_2012 YPC_2028 SM01321 YPC_2028 YPC_2030 SM00382 ATPases associated with a variety of cellular activities YPC_2036 SM00382 ATPases associated with a variety of cellular activities YPC_2058 SM00382 ATPases associated with a variety of cellular activities YPC_2062 SM00411 bacterial (prokaryotic) histone like domain YPC_2063 SM00873 B3/4 domain YPC_2063 SM00874 tRNA synthetase B5 domain YPC_2063 SM00896 Ferredoxin-fold anticodon binding domain YPC_2070 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPC_2081 SM00382 ATPases associated with a variety of cellular activities YPC_2096 SM00382 ATPases associated with a variety of cellular activities YPC_2102 SM00644 YPC_2102 YPC_2103 SM00346 helix_turn_helix isocitrate lyase regulation YPC_2112 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPC_2112 SM00245 tail specific protease YPC_2113 SM00945 ProQ/FINO family YPC_2119 SM00972 Spore Coat Protein U domain YPC_2120 SM00972 Spore Coat Protein U domain YPC_2121 SM00972 Spore Coat Protein U domain YPC_2125 SM00972 Spore Coat Protein U domain YPC_2127 SM01022 YPC_2127 YPC_2130 SM00382 ATPases associated with a variety of cellular activities YPC_2133 SM00528 Domain in histone-like proteins of HNS family YPC_2136 SM00448 cheY-homologous receiver domain YPC_2147 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPC_2147 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPC_2147 SM00493 YPC_2147 YPC_2153 SM00870 YPC_2153 YPC_2157 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPC_2160 SM00763 PrkA AAA domain YPC_2169 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_2181 SM00060 Fibronectin type 3 domain YPC_2186 SM01040 BRO family, N-terminal domain YPC_2190 SM00232 JAB/MPN domain YPC_2196 SM00635 Bacterial Ig-like domain 2 YPC_2202 SM00635 Bacterial Ig-like domain 2 YPC_2219 SM01040 BRO family, N-terminal domain YPC_2225 SM00382 ATPases associated with a variety of cellular activities YPC_2237 SM00341 Helicase and RNase D C-terminal YPC_2237 SM00474 3'-5' exonuclease YPC_2243 SM00487 DEAD-like helicases superfamily YPC_2243 SM00491 YPC_2243 YPC_2253 SM00257 Lysin motif YPC_2255 SM00382 ATPases associated with a variety of cellular activities YPC_2257 SM00382 ATPases associated with a variety of cellular activities YPC_2258 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPC_2272 SM00836 DALR anticodon binding domain YPC_2272 SM01016 Arginyl tRNA synthetase N terminal dom YPC_2273 SM00912 haemagglutination activity domain YPC_2286 SM00481 DNA polymerase alpha chain like domain YPC_2290 SM00382 ATPases associated with a variety of cellular activities YPC_2302 SM00937 YPC_2302 YPC_2306 SM01400 YPC_2306 YPC_2313 SM00450 Rhodanese Homology Domain YPC_2320 SM00448 cheY-homologous receiver domain YPC_2320 SM00862 Transcriptional regulatory protein, C terminal YPC_2321 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_2321 SM00387 Histidine kinase-like ATPases YPC_2321 SM00388 His Kinase A (phosphoacceptor) domain YPC_2332 SM00671 Sel1-like repeats. YPC_2333 SM00671 Sel1-like repeats. YPC_2350 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_2350 SM00866 YPC_2350 YPC_2354 SM00382 ATPases associated with a variety of cellular activities YPC_2360 SM00382 ATPases associated with a variety of cellular activities YPC_2366 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_2366 SM00866 YPC_2366 YPC_2396 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPC_2396 SM00465 GIY-YIG type nucleases (URI domain) YPC_2397 SM00421 helix_turn_helix, Lux Regulon YPC_2397 SM00448 cheY-homologous receiver domain YPC_2416 SM00382 ATPases associated with a variety of cellular activities YPC_2418 SM00062 Bacterial periplasmic substrate-binding proteins YPC_2418 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPC_2428 SM00342 helix_turn_helix, arabinose operon control protein YPC_2432 SM00478 endonuclease III YPC_2439 SM00382 ATPases associated with a variety of cellular activities YPC_2455 SM00382 ATPases associated with a variety of cellular activities YPC_2459 SM01007 Class II Aldolase and Adducin N-terminal domain YPC_2467 SM00047 Lysozyme subfamily 2 YPC_2476 SM00858 YPC_2476 YPC_2503 SM01022 YPC_2503 YPC_2505 SM00487 DEAD-like helicases superfamily YPC_2505 SM00490 helicase superfamily c-terminal domain YPC_2511 SM00903 Flavin reductase like domain YPC_2522 SM00347 helix_turn_helix multiple antibiotic resistance protein YPC_2523 SM01091 Transporter associated domain YPC_2530 SM00091 PAS domain YPC_2531 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPC_2531 SM00091 PAS domain YPC_2531 SM00267 diguanylate cyclase YPC_2535 SM00357 Cold shock protein domain YPC_2544 SM00342 helix_turn_helix, arabinose operon control protein YPC_2546 SM00382 ATPases associated with a variety of cellular activities YPC_2547 SM00090 RIO-like kinase YPC_2552 SM00382 ATPases associated with a variety of cellular activities YPC_2554 SM00354 helix_turn _helix lactose operon repressor YPC_2566 SM00421 helix_turn_helix, Lux Regulon YPC_2566 SM00448 cheY-homologous receiver domain YPC_2580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPC_2586 SM00634 Bacterial Ig-like domain (group 1) YPC_2595 SM00382 ATPases associated with a variety of cellular activities YPC_2596 SM00382 ATPases associated with a variety of cellular activities YPC_2609 SM01350 YPC_2609 YPC_2619 SM00382 ATPases associated with a variety of cellular activities YPC_2625 SM01091 Transporter associated domain YPC_2631 SM01321 YPC_2631 YPC_2642 SM00919 Malic enzyme, NAD binding domain YPC_2642 SM01274 YPC_2642 YPC_2645 SM00382 ATPases associated with a variety of cellular activities YPC_2652 SM00829 Enoylreductase YPC_2657 SM00382 ATPases associated with a variety of cellular activities YPC_2659 SM00852 Probable molybdopterin binding domain YPC_2663 SM00382 ATPases associated with a variety of cellular activities YPC_2686 SM00382 ATPases associated with a variety of cellular activities YPC_2686 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_2693 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPC_2702 SM00825 Beta-ketoacyl synthase YPC_2714 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPC_2715 SM00992 Hemimethylated DNA-binding protein YccV like YPC_2717 SM00881 CoA binding domain YPC_2720 SM00851 MGS-like domain YPC_2728 SM01321 YPC_2728 YPC_2734 SM00382 ATPases associated with a variety of cellular activities YPC_2735 SM00825 Beta-ketoacyl synthase YPC_2736 SM01321 YPC_2736 YPC_2743 SM00382 ATPases associated with a variety of cellular activities YPC_2744 SM00981 YPC_2744 YPC_2758 SM00849 Metallo-beta-lactamase superfamily YPC_2761 SM01321 YPC_2761 YPC_2772 SM00357 Cold shock protein domain YPC_2773 SM01150 YPC_2773 YPC_2775 SM00382 ATPases associated with a variety of cellular activities YPC_2776 SM00849 Metallo-beta-lactamase superfamily YPC_2778 SM00411 bacterial (prokaryotic) histone like domain YPC_2779 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_2785 SM00870 YPC_2785 YPC_2794 SM00382 ATPases associated with a variety of cellular activities YPC_2797 SM00382 ATPases associated with a variety of cellular activities YPC_2799 SM00843 YPC_2799 YPC_2801 SM00344 helix_turn_helix ASNC type YPC_2804 SM00382 ATPases associated with a variety of cellular activities YPC_2805 SM00382 ATPases associated with a variety of cellular activities YPC_2809 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_2810 SM01321 YPC_2810 YPC_2816 SM00357 Cold shock protein domain YPC_2817 SM00382 ATPases associated with a variety of cellular activities YPC_2833 SM00830 Chorismate mutase type II YPC_2834 SM00382 ATPases associated with a variety of cellular activities YPC_2835 SM00062 Bacterial periplasmic substrate-binding proteins YPC_2835 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPC_2842 SM00382 ATPases associated with a variety of cellular activities YPC_2846 SM00244 prohibitin homologues YPC_2849 SM00062 Bacterial periplasmic substrate-binding proteins YPC_2849 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPC_2854 SM00382 ATPases associated with a variety of cellular activities YPC_2862 SM00014 Acid phosphatase homologues YPC_2863 SM01133 YPC_2863 YPC_2864 SM00420 helix_turn_helix, Deoxyribose operon repressor YPC_2864 SM01134 YPC_2864 YPC_2870 SM00936 Penicillin-binding protein 5, C-terminal domain YPC_2872 SM00382 ATPases associated with a variety of cellular activities YPC_2872 SM00930 YPC_2872 YPC_2879 SM00382 ATPases associated with a variety of cellular activities YPC_2886 SM00518 AP endonuclease family 2 YPC_2891 SM00862 Transcriptional regulatory protein, C terminal YPC_2899 SM00382 ATPases associated with a variety of cellular activities YPC_2910 SM00841 Elongation factor P, C-terminal YPC_2910 SM01185 YPC_2910 YPC_2914 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_2914 SM00895 YPC_2914 YPC_2917 SM00833 Cobalamin synthesis protein cobW C-terminal domain YPC_2918 SM00014 Acid phosphatase homologues YPC_2924 SM00052 Putative diguanylate phosphodiesterase YPC_2928 SM00382 ATPases associated with a variety of cellular activities YPC_2933 SM00363 S4 RNA-binding domain YPC_2934 SM00487 DEAD-like helicases superfamily YPC_2934 SM00490 helicase superfamily c-terminal domain YPC_2936 SM01321 YPC_2936 YPC_2967 SM00420 helix_turn_helix, Deoxyribose operon repressor YPC_2967 SM01134 YPC_2967 YPC_2968 SM01007 Class II Aldolase and Adducin N-terminal domain YPC_2971 SM00530 Helix-turn-helix XRE-family like proteins YPC_2975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPC_2975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_2982 SM01321 YPC_2982 YPC_2990 SM00421 helix_turn_helix, Lux Regulon YPC_2990 SM00448 cheY-homologous receiver domain YPC_2991 SM00387 Histidine kinase-like ATPases YPC_2991 SM00388 His Kinase A (phosphoacceptor) domain YPC_2991 SM00448 cheY-homologous receiver domain YPC_2993 SM00434 DNA Topoisomerase IV YPC_3000 SM00852 Probable molybdopterin binding domain YPC_3004 SM01060 YPC_3004 YPC_3005 SM00487 DEAD-like helicases superfamily YPC_3005 SM00488 YPC_3005 YPC_3005 SM00491 YPC_3005 YPC_3013 SM00382 ATPases associated with a variety of cellular activities YPC_3017 SM00450 Rhodanese Homology Domain YPC_3020 SM00382 ATPases associated with a variety of cellular activities YPC_3030 SM00382 ATPases associated with a variety of cellular activities YPC_3034 SM00507 HNH nucleases YPC_3035 SM01118 YPC_3035 YPC_3043 SM01321 YPC_3043 YPC_3045 SM00490 helicase superfamily c-terminal domain YPC_3054 SM01321 YPC_3054 YPC_3058 SM00116 Domain in cystathionine beta-synthase and other proteins. YPC_3058 SM01240 YPC_3058 YPC_3065 SM00564 beta-propeller repeat YPC_3070 SM00530 Helix-turn-helix XRE-family like proteins YPC_3071 SM00028 Tetratricopeptide repeats YPC_3073 SM00562 YPC_3073 YPC_3074 SM00247 Beta/gamma crystallins YPC_3077 SM00869 Autotransporter beta-domain YPC_3089 SM00271 DnaJ molecular chaperone homology domain YPC_3097 SM01321 YPC_3097 YPC_3108 SM00938 Nitrogen regulatory protein P-II YPC_3110 SM00382 ATPases associated with a variety of cellular activities YPC_3110 SM00448 cheY-homologous receiver domain YPC_3112 SM00387 Histidine kinase-like ATPases YPC_3112 SM00388 His Kinase A (phosphoacceptor) domain YPC_3113 SM01321 YPC_3113 YPC_3119 SM01211 YPC_3119 YPC_3120 SM00062 Bacterial periplasmic substrate-binding proteins YPC_3126 SM01321 YPC_3126 YPC_3132 SM00358 Double-stranded RNA binding motif YPC_3132 SM00535 Ribonuclease III family YPC_3142 SM00487 DEAD-like helicases superfamily YPC_3142 SM00490 helicase superfamily c-terminal domain YPC_3144 SM00248 ankyrin repeats YPC_3156 SM00797 Allophanate hydrolase subunit 2 YPC_3157 SM00796 Allophanate hydrolase subunit 1 YPC_3167 SM00387 Histidine kinase-like ATPases YPC_3167 SM00388 His Kinase A (phosphoacceptor) domain YPC_3168 SM00448 cheY-homologous receiver domain YPC_3168 SM00862 Transcriptional regulatory protein, C terminal YPC_3177 SM00342 helix_turn_helix, arabinose operon control protein YPC_3192 SM00988 UreE urease accessory protein, N-terminal domain YPC_3203 SM00357 Cold shock protein domain YPC_3213 SM00382 ATPases associated with a variety of cellular activities YPC_3219 SM00382 ATPases associated with a variety of cellular activities YPC_3236 SM01321 YPC_3236 YPC_3253 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_3257 SM00116 Domain in cystathionine beta-synthase and other proteins. YPC_3257 SM01091 Transporter associated domain YPC_3259 SM00062 Bacterial periplasmic substrate-binding proteins YPC_3262 SM00382 ATPases associated with a variety of cellular activities YPC_3274 SM00936 Penicillin-binding protein 5, C-terminal domain YPC_3277 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_3284 SM00421 helix_turn_helix, Lux Regulon YPC_3289 SM00382 ATPases associated with a variety of cellular activities YPC_3295 SM00382 ATPases associated with a variety of cellular activities YPC_3304 SM01359 YPC_3304 YPC_3304 SM01360 YPC_3304 YPC_3305 SM01321 YPC_3305 YPC_3317 SM00869 Autotransporter beta-domain YPC_3325 SM01217 YPC_3325 YPC_3332 SM00382 ATPases associated with a variety of cellular activities YPC_3335 SM00195 Dual specificity phosphatase, catalytic domain YPC_3335 SM00404 Protein tyrosine phosphatase, catalytic domain motif YPC_3337 SM00563 Phosphate acyltransferases YPC_3350 SM01321 YPC_3350 YPC_3352 SM00840 YPC_3352 YPC_3355 SM01001 AIR carboxylase YPC_3358 SM00382 ATPases associated with a variety of cellular activities YPC_3360 SM00822 YPC_3360 YPC_3363 SM00244 prohibitin homologues YPC_3365 SM00422 helix_turn_helix, mercury resistance YPC_3399 SM00387 Histidine kinase-like ATPases YPC_3401 SM00493 YPC_3401 YPC_3403 SM00382 ATPases associated with a variety of cellular activities YPC_3426 SM00938 Nitrogen regulatory protein P-II YPC_3427 SM00382 ATPases associated with a variety of cellular activities YPC_3428 SM00382 ATPases associated with a variety of cellular activities YPC_3429 SM00344 helix_turn_helix ASNC type YPC_3438 SM00411 bacterial (prokaryotic) histone like domain YPC_3439 SM00382 ATPases associated with a variety of cellular activities YPC_3439 SM00464 Found in ATP-dependent protease La (LON) YPC_3440 SM00382 ATPases associated with a variety of cellular activities YPC_3440 SM00994 ClpX C4-type zinc finger YPC_3440 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_3458 SM00981 YPC_3458 YPC_3462 SM00861 Transketolase, pyrimidine binding domain YPC_3463 SM01321 YPC_3463 YPC_3473 SM01321 YPC_3473 YPC_3477 SM01323 YPC_3477 YPC_3486 SM00642 Alpha-amylase domain YPC_3490 SM00091 PAS domain YPC_3490 SM00387 Histidine kinase-like ATPases YPC_3490 SM00388 His Kinase A (phosphoacceptor) domain YPC_3491 SM00448 cheY-homologous receiver domain YPC_3491 SM00862 Transcriptional regulatory protein, C terminal YPC_3496 SM00382 ATPases associated with a variety of cellular activities YPC_3507 SM01321 YPC_3507 YPC_3512 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPC_3518 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins YPC_3520 SM01321 YPC_3520 YPC_3531 SM00900 YPC_3531 YPC_3541 SM00710 Parallel beta-helix repeats YPC_3542 SM00912 haemagglutination activity domain YPC_3550 SM00382 ATPases associated with a variety of cellular activities YPC_3553 SM00062 Bacterial periplasmic substrate-binding proteins YPC_3563 SM00347 helix_turn_helix multiple antibiotic resistance protein YPC_3566 SM00967 RNA 2'-O ribose methyltransferase substrate binding YPC_3569 SM01144 YPC_3569 YPC_3570 SM00881 CoA binding domain YPC_3571 SM00155 Phospholipase D. Active site motifs. YPC_3579 SM00382 ATPases associated with a variety of cellular activities YPC_3579 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_3581 SM00363 S4 RNA-binding domain YPC_3584 SM01321 YPC_3584 YPC_3586 SM00830 Chorismate mutase type II YPC_3588 SM00382 ATPases associated with a variety of cellular activities YPC_3590 SM00830 Chorismate mutase type II YPC_3592 SM00448 cheY-homologous receiver domain YPC_3592 SM00850 LytTr DNA-binding domain YPC_3597 SM01321 YPC_3597 YPC_3605 SM00382 ATPases associated with a variety of cellular activities YPC_3605 SM00962 SRP54-type protein, GTPase domain YPC_3605 SM00963 SRP54-type protein, helical bundle domain YPC_3607 SM01091 Transporter associated domain YPC_3608 SM01321 YPC_3608 YPC_3620 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPC_3622 SM00382 ATPases associated with a variety of cellular activities YPC_3632 SM00382 ATPases associated with a variety of cellular activities YPC_3642 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPC_3643 SM01007 Class II Aldolase and Adducin N-terminal domain YPC_3644 SM00420 helix_turn_helix, Deoxyribose operon repressor YPC_3644 SM01134 YPC_3644 YPC_3647 SM01321 YPC_3647 YPC_3648 SM00382 ATPases associated with a variety of cellular activities YPC_3660 SM01235 YPC_3660 YPC_3661 SM00062 Bacterial periplasmic substrate-binding proteins YPC_3664 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YPC_3667 SM01120 YPC_3667 YPC_3670 SM00829 Enoylreductase YPC_3673 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YPC_3673 SM00534 ATPase domain of DNA mismatch repair MUTS family YPC_3675 SM00257 Lysin motif YPC_3700 SM01192 YPC_3700 YPC_3700 SM01193 YPC_3700 YPC_3704 SM00954 Region found in RelA / SpoT proteins YPC_3707 SM00073 Histidine Phosphotransfer domain YPC_3707 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_3707 SM00387 Histidine kinase-like ATPases YPC_3707 SM00388 His Kinase A (phosphoacceptor) domain YPC_3707 SM00448 cheY-homologous receiver domain YPC_3708 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPC_3709 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPC_3721 SM00382 ATPases associated with a variety of cellular activities YPC_3723 SM00487 DEAD-like helicases superfamily YPC_3723 SM00490 helicase superfamily c-terminal domain YPC_3723 SM00847 Helicase associated domain (HA2) Add an annotation YPC_3736 SM00382 ATPases associated with a variety of cellular activities YPC_3737 SM00947 Carbonic anhydrase YPC_3750 SM01321 YPC_3750 YPC_3756 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_3756 SM00895 YPC_3756 YPC_3760 SM00644 YPC_3760 YPC_3765 SM01240 YPC_3765 YPC_3769 SM01321 YPC_3769 YPC_3771 SM00382 ATPases associated with a variety of cellular activities YPC_3789 SM00382 ATPases associated with a variety of cellular activities YPC_3790 SM00382 ATPases associated with a variety of cellular activities YPC_3795 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_3795 SM00866 YPC_3795 YPC_3800 SM00382 ATPases associated with a variety of cellular activities YPC_3801 SM00382 ATPases associated with a variety of cellular activities YPC_3803 SM00072 Guanylate kinase homologues. YPC_3804 SM00849 Metallo-beta-lactamase superfamily YPC_3805 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPC_3808 SM00382 ATPases associated with a variety of cellular activities YPC_3827 SM00530 Helix-turn-helix XRE-family like proteins YPC_3830 SM00487 DEAD-like helicases superfamily YPC_3830 SM00490 helicase superfamily c-terminal domain YPC_3831 SM00028 Tetratricopeptide repeats YPC_3832 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_3832 SM00322 K homology RNA-binding domain YPC_3837 SM00862 Transcriptional regulatory protein, C terminal YPC_3851 SM00858 YPC_3851 YPC_3855 SM00382 ATPases associated with a variety of cellular activities YPC_3860 SM00382 ATPases associated with a variety of cellular activities YPC_3877 SM01321 YPC_3877 YPC_3895 SM00342 helix_turn_helix, arabinose operon control protein YPC_3902 SM00563 Phosphate acyltransferases YPC_3903 SM00434 DNA Topoisomerase IV YPC_3906 SM00387 Histidine kinase-like ATPases YPC_3906 SM00433 TopoisomeraseII YPC_3925 SM01118 YPC_3925 YPC_3926 SM00287 Bacterial SH3 domain homologues YPC_3927 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPC_3929 SM00905 Dihydroneopterin aldolase YPC_3930 SM01207 YPC_3930 YPC_3934 SM00400 zinc finger YPC_3934 SM00493 YPC_3934 YPC_3934 SM00766 DNA primase DnaG DnaB-binding YPC_3963 SM01217 YPC_3963 YPC_3968 SM00354 helix_turn _helix lactose operon repressor YPC_3970 SM00382 ATPases associated with a variety of cellular activities YPC_3973 SM00869 Autotransporter beta-domain YPC_3981 SM00912 haemagglutination activity domain YPC_3983 SM00327 von Willebrand factor (vWF) type A domain YPC_3985 SM00327 von Willebrand factor (vWF) type A domain YPC_3986 SM00327 von Willebrand factor (vWF) type A domain YPC_3988 SM00220 Serine/Threonine protein kinases, catalytic domain YPC_3993 SM00869 Autotransporter beta-domain YPC_3998 SM01321 YPC_3998 YPC_4004 SM00650 Ribosomal RNA adenine dimethylases YPC_4008 SM00271 DnaJ molecular chaperone homology domain YPC_4018 SM00382 ATPases associated with a variety of cellular activities YPC_4018 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_4031 SM00487 DEAD-like helicases superfamily YPC_4031 SM00490 helicase superfamily c-terminal domain YPC_4032 SM00486 DNA polymerase type-B family YPC_4034 SM00382 ATPases associated with a variety of cellular activities YPC_4044 SM01329 YPC_4044 YPC_4045 SM00917 LeuA allosteric (dimerisation) domain YPC_4046 SM01321 YPC_4046 YPC_4054 SM01321 YPC_4054 YPC_4055 SM00354 helix_turn _helix lactose operon repressor YPC_4071 SM00842 Cell division protein FtsA YPC_4072 SM00864 Tubulin/FtsZ family, GTPase domain YPC_4072 SM00865 Tubulin/FtsZ family, C-terminal domain YPC_4076 SM00957 SecA DEAD-like domain YPC_4076 SM00958 SecA preprotein cross-linking domain YPC_4080 SM00382 ATPases associated with a variety of cellular activities YPC_4092 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_4092 SM00895 YPC_4092 YPC_4096 SM00858 YPC_4096 YPC_4098 SM01321 YPC_4098 YPC_4104 SM00851 MGS-like domain YPC_4104 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YPC_4105 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain YPC_4107 SM01321 YPC_4107 YPC_4113 SM00904 Riboflavin kinase YPC_4117 SM00271 DnaJ molecular chaperone homology domain YPC_4122 SM00852 Probable molybdopterin binding domain YPC_4132 SM00448 cheY-homologous receiver domain YPC_4132 SM00862 Transcriptional regulatory protein, C terminal YPC_4134 SM00342 helix_turn_helix, arabinose operon control protein YPC_4134 SM00871 Bacterial transcription activator, effector binding domain YPC_4135 SM00855 Phosphoglycerate mutase family YPC_4139 SM00831 Cation transporter/ATPase, N-terminus YPC_4141 SM00267 diguanylate cyclase YPC_4144 SM00382 ATPases associated with a variety of cellular activities YPC_4146 SM00530 Helix-turn-helix XRE-family like proteins YPC_4147 SM00382 ATPases associated with a variety of cellular activities YPC_4155 SM01133 YPC_4155 YPC_4164 SM00749 bacterial OsmY and nodulation domain YPC_4173 SM00267 diguanylate cyclase YPC_4190 SM00382 ATPases associated with a variety of cellular activities YPC_4195 SM01133 YPC_4195 YPC_4203 SM00342 helix_turn_helix, arabinose operon control protein YPC_4219 SM00382 ATPases associated with a variety of cellular activities YPC_4221 SM00382 ATPases associated with a variety of cellular activities YPC_4226 SM01230 YPC_4226 YPC_4227 SM00091 PAS domain YPC_4227 SM00387 Histidine kinase-like ATPases YPC_4227 SM00388 His Kinase A (phosphoacceptor) domain YPC_4228 SM00382 ATPases associated with a variety of cellular activities YPC_4228 SM00448 cheY-homologous receiver domain YPC_4229 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_4234 SM01321 YPC_4234 YPC_4236 SM01321 YPC_4236 YPC_4238 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPC_4238 SM00474 3'-5' exonuclease YPC_4238 SM00475 5'-3' exonuclease YPC_4238 SM00482 DNA polymerase A domain YPC_4252 SM00382 ATPases associated with a variety of cellular activities YPC_4262 SM00749 bacterial OsmY and nodulation domain YPC_4267 SM00073 Histidine Phosphotransfer domain YPC_4267 SM00091 PAS domain YPC_4267 SM00387 Histidine kinase-like ATPases YPC_4267 SM00388 His Kinase A (phosphoacceptor) domain YPC_4267 SM00448 cheY-homologous receiver domain YPC_4269 SM00729 Elongator protein 3, MiaB family, Radical SAM YPC_4279 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPC_4280 SM01321 YPC_4280 YPC_4282 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPC_4289 SM00382 ATPases associated with a variety of cellular activities YPC_4291 SM00116 Domain in cystathionine beta-synthase and other proteins. YPC_4295 SM00382 ATPases associated with a variety of cellular activities YPC_4306 SM00354 helix_turn _helix lactose operon repressor YPC_4308 SM00642 Alpha-amylase domain YPC_4338 SM00316 Ribosomal protein S1-like RNA-binding domain YPC_4343 SM00052 Putative diguanylate phosphodiesterase YPC_4343 SM00267 diguanylate cyclase YPC_4344 SM00829 Enoylreductase YPC_4349 SM00878 Biotin carboxylase C-terminal domain YPC_4360 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPC_4360 SM00895 YPC_4360 YPC_4364 SM00849 Metallo-beta-lactamase superfamily YPC_4367 SM00357 Cold shock protein domain YPC_4368 SM00357 Cold shock protein domain YPC_4369 SM01321 YPC_4369 YPC_4378 SM00382 ATPases associated with a variety of cellular activities YPC_4387 SM00382 ATPases associated with a variety of cellular activities YPC_4390 SM00062 Bacterial periplasmic substrate-binding proteins YPC_4393 SM01133 YPC_4393 YPC_4398 SM00342 helix_turn_helix, arabinose operon control protein YPC_4406 SM00530 Helix-turn-helix XRE-family like proteins YPC_4409 SM00860 SMI1 / KNR4 family YPC_4422 SM00382 ATPases associated with a variety of cellular activities YPC_4422 SM01086 C-terminal, D2-small domain, of ClpB protein YPC_4440 SM00642 Alpha-amylase domain YPC_4441 SM00642 Alpha-amylase domain YPC_4443 SM00634 Bacterial Ig-like domain (group 1) YPC_4444 SM00634 Bacterial Ig-like domain (group 1) YPC_4450 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPC_4459 SM00354 helix_turn _helix lactose operon repressor YPC_4463 SM00448 cheY-homologous receiver domain YPC_4463 SM00862 Transcriptional regulatory protein, C terminal YPC_4469 SM00382 ATPases associated with a variety of cellular activities YPC_4470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_4470 SM00387 Histidine kinase-like ATPases YPC_4470 SM00388 His Kinase A (phosphoacceptor) domain YPC_4470 SM00448 cheY-homologous receiver domain YPC_4474 SM01321 YPC_4474 YPC_4477 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YPC_4478 SM00235 Zinc-dependent metalloprotease YPC_4492 SM00869 Autotransporter beta-domain YPC_4497 SM00052 Putative diguanylate phosphodiesterase YPC_4505 SM00052 Putative diguanylate phosphodiesterase YPC_4505 SM00267 diguanylate cyclase YPC_4508 SM00382 ATPases associated with a variety of cellular activities YPC_4509 SM00382 ATPases associated with a variety of cellular activities YPC_4516 SM00912 haemagglutination activity domain YPC_4517 SM01321 YPC_4517 YPC_4522 SM00421 helix_turn_helix, Lux Regulon YPC_4522 SM00448 cheY-homologous receiver domain YPC_4535 SM00382 ATPases associated with a variety of cellular activities YPC_4539 SM00530 Helix-turn-helix XRE-family like proteins YPC_4547 SM00342 helix_turn_helix, arabinose operon control protein YPC_4549 SM00382 ATPases associated with a variety of cellular activities YPC_4580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPC_4580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPC_4580 SM01358 YPC_4580 YPC_4600 SM00642 Alpha-amylase domain YPC_4615 SM00387 Histidine kinase-like ATPases YPC_4615 SM00433 TopoisomeraseII YPC_4617 SM00480 DNA polymerase III beta subunit YPC_4618 SM00382 ATPases associated with a variety of cellular activities YPC_4618 SM00760 Bacterial dnaA protein helix-turn-helix domain YPC_4622 SM01234 YPC_4622 YPC_4634 SM00062 Bacterial periplasmic substrate-binding proteins YPC_4637 SM00382 ATPases associated with a variety of cellular activities YPC_4646 SM00382 ATPases associated with a variety of cellular activities YPC_4657 SM01228 YPC_4657 YPC_4688 SM00364 Leucine-rich repeats, bacterial type YPC_4715 SM00342 helix_turn_helix, arabinose operon control protein YPC_4734 SM00194 Protein tyrosine phosphatase, catalytic domain YPC_4734 SM00404 Protein tyrosine phosphatase, catalytic domain motif YPC_4756 SM00857 Resolvase, N terminal domain YPC_4765 SM00382 ATPases associated with a variety of cellular activities YPC_4771 SM00232 JAB/MPN domain YPC_4777 SM00635 Bacterial Ig-like domain 2 YPC_4783 SM00635 Bacterial Ig-like domain 2 YPC_4793 SM00382 ATPases associated with a variety of cellular activities YPC_4794 SM00470 ParB-like nuclease domain YPC_4795 SM00470 ParB-like nuclease domain YPC_4796 SM00487 DEAD-like helicases superfamily YPC_4796 SM00490 helicase superfamily c-terminal domain YPC_4803 SM01321 YPC_4803 YPC_4812 SM00062 Bacterial periplasmic substrate-binding proteins YPC_4822 SM00244 prohibitin homologues YPC_4826 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPC_4826 SM00475 5'-3' exonuclease YPC_4831 SM00481 DNA polymerase alpha chain like domain YPC_4841 SM00342 helix_turn_helix, arabinose operon control protein YPC_4847 SM00382 ATPases associated with a variety of cellular activities YPC_4849 SM00470 ParB-like nuclease domain YPC_4857 SM00382 ATPases associated with a variety of cellular activities YPC_4860 SM00470 ParB-like nuclease domain YPC_4864 SM00857 Resolvase, N terminal domain YPC_4869 SM00155 Phospholipase D. Active site motifs. YPC_4881 SM00382 ATPases associated with a variety of cellular activities YPC_4888 SM00530 Helix-turn-helix XRE-family like proteins