locus_tag old_locus_tag gene Name start end strand product note type ID NCBI 81916 83869 - mobile_genetic_element id187 http://www.ncbi.nlm.nih.gov/gene/?term= 44887 45152 + partial element%3B similar to part of Yersinia intermedia insertion sequences IS1635 (YIY18002). mobile_genetic_element id152 http://www.ncbi.nlm.nih.gov/gene/?term= 1 1954 + mobile_genetic_element id103 http://www.ncbi.nlm.nih.gov/gene/?term= 103783 105097 - contains transposase%2C IS111A/IS1328/IS1533 (Interpro|IPR002525)%3B contains transposase IS116/IS110/IS902 (Interpro|IPR003346%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: transposase (GO:0004803)%2C Biological Process: DNA transposition (GO:0006313)) mobile_genetic_element id189 http://www.ncbi.nlm.nih.gov/gene/?term= 61976 63929 + mobile_genetic_element id183 http://www.ncbi.nlm.nih.gov/gene/?term= 1 1954 + mobile_genetic_element id191 http://www.ncbi.nlm.nih.gov/gene/?term= 58432 60098 + partial element%3B similar to part of Pseudomonas aeruginosa PAO25 (pR68.45) (X14793%2C 2131 nt). mobile_genetic_element id160 http://www.ncbi.nlm.nih.gov/gene/?term= 41929 42635 - partial element%3B similar to IS1635 of Yersinia intermedia (YIY18002). mobile_genetic_element id137 http://www.ncbi.nlm.nih.gov/gene/?term= 13939 14243 + partial elment mobile_genetic_element id108 http://www.ncbi.nlm.nih.gov/gene/?term= 46022 46354 - partial element%3B similar to part of Yersinia intermedia insertion sequences IS1635 (YIY18002). mobile_genetic_element id153 http://www.ncbi.nlm.nih.gov/gene/?term= 57753 58427 - partial element%3B similar to part of IS1222 of Enterobacter agglomerans 339 (pEA9) (X78052). mobile_genetic_element id159 http://www.ncbi.nlm.nih.gov/gene/?term= 37700 38411 - mobile_genetic_element id178 http://www.ncbi.nlm.nih.gov/gene/?term= 1 1954 + mobile_genetic_element id173 http://www.ncbi.nlm.nih.gov/gene/?term= YP_0001 YP0001 fldA1 fldA1 21 461 - putative flavoprotein similar to Yersinia pestis CO92 YPO0001 and Yersinia pestis KIM mioC. Contains Flavodoxin-like domain (Interpro|IPR001094%2C (GO:0006118)%2C (GO:0008246)). Contains Flavodoxin (Interpro|IPR001226%2C (GO:0006118)%2C (GO:0009457)) gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0001 YP_0002 YP0002 asnC asnC 554 1015 - regulatory protein similar to Yersinia pestis CO92 asnC and Yersinia pestis KIM asnC. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)) gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0002 YP_0003 YP0003 asnA asnA 1185 2177 + aspartate-ammonia ligase similar to Yersinia pestis CO92 asnA and Yersinia pestis KIM asnA. Contains Aspartate--ammonia ligase (Interpro|IPR004618%2C (GO:0006529)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0003 YP_0004 YP0004 YP_0004 2276 3742 - hypothetical protein similar to Yersinia pestis CO92 YPO0004 and Yersinia pestis KIM y0004. Contains Von Willebrand factor%2C type A (Interpro|IPR002035) gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0004 YP_0005 YP0005 YP_0005 3746 5314 - MoxR-like ATPases similar to Yersinia pestis CO92 YPO0005 and Yersinia pestis KIM y0005. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0005 YP_0006 YP0006 kup kup 5588 7456 + potassium transport protein similar to Yersinia pestis CO92 kup and Yersinia pestis KIM kup. Contains K+ potassium transporter (Interpro|IPR003855%2C (GO:0006813)%2C (GO:0016020)) gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0006 YP_0007 YP0007 rbsD1 rbsD1 7661 8080 + ribose permease similar to Yersinia pestis CO92 YPO0007 and Yersinia pestis KIM rbsD gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0007 YP_0008 YP0008 rbsK1 rbsK1 8131 9057 + ribokinase similar to Yersinia pestis CO92 rbsK and Yersinia pestis KIM rbsK. Contains Ribokinase (Interpro|IPR002139%2C (GO:0006014)). Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173) gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0008 YP_0009 YP0009 purR1 purR1 9077 9280 + Transcriptional regulators similar to Yersinia pestis KIM y0009 gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0009 YP_0010 YP0010 proP1 proP1 9277 10701 - putative membrane transport protein similar to Yersinia pestis CO92 YPO0009 and Yersinia pestis KIM y0010. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0010 YP_0011 YP0011 fadR1 fadR1 10781 11470 - putative GntR-famly transcriptional regulator similar to Yersinia pestis CO92 YPO0010 and Yersinia pestis KIM y0011. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)) gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0011 YP_0012 YP0012 YP_0012 17690 18898 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO0011 and Yersinia pestis KIM y2424. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0012 YP_0013 YP0013 mobB mobB 18956 19513 - putative molybdopterin-guanine dinucleotide biosynthesis protein B similar to Yersinia pestis CO92 mobB and Yersinia pestis KIM mobB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Molybdopterin-guanine dinucleotide biosynthesis protein (Interpro|IPR004435%2C (GO:0006777)) gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0013 YP_0014 YP0014 mobA mobA 19486 20127 - molybdopterin-guanine dinucleotide biosynthesis protein A similar to Yersinia pestis CO92 mobA and Yersinia pestis KIM mobA. gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0014 YP_0015 YP0015 YP_0015 20227 20496 + hypothetical protein similar to Yersinia pestis CO92 YPO0013a and Yersinia pestis KIM y3814 gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0015 YP_0016 YP0016 YP_0016 20587 21573 + Putative homoserine kinase type II (protein kinase fold) similar to Yersinia pestis CO92 YPO0014 and Yersinia pestis KIM y3813 gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0016 YP_0017 YP0017 dsbA dsbA 21601 22224 + secreted thiol:disulfide interchange protein DsbA similar to Yersinia pestis CO92 dsbA and Yersinia pestis KIM dsbA. Contains DSBA oxidoreductase (Interpro|IPR001853%2C (GO:0030288)). Contains Thioredoxin type domain (Interpro|IPR006662%2C (GO:0006118)). Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0017 YP_0018 YP0018 polA polA 22716 25514 + DNA polymerase I similar to Yersinia pestis CO92 polA and Yersinia pestis KIM polA. Contains 5'3'-Exonuclease N- and I-domain (Interpro|IPR000513%2C (GO:0004518)). Contains DNA-directed DNA polymerase (Interpro|IPR001098%2C (GO:0006260)). Contains DNA polymerase%2C family A (Interpro|IPR002298%2C (GO:0006260)). Contains 5'-3' exonuclease (Interpro|IPR002421%2C (GO:0008409)). Contains 3'-5' exonuclease (Interpro|IPR002562%2C (GO:0008408)). Contains Helix-hairpin-helix DNA-binding%2C class 2 (Interpro|IPR003584%2C (GO:0005622)) gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0018 YP_0019 YP0019 tnp_1 tnp_1 25872 26381 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and similar to Yersinia pestis KIM y0044 (residues 1 to 152 of 152 are similar to residues 18 to 169 of 168 from Yersinia pestis KIM). Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0019 YP_0020 YP0020 YP_0020 26633 27283 - putative GTPases similar to Yersinia pestis CO92 YPO0019 and Yersinia pestis KIM y3809. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains GTP-binding domain (Interpro|IPR005289) gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0020 YP_0021 YP0021 YP_0021 28028 28594 + hypothetical protein similar to Yersinia pestis CO92 YPO0020 and Yersinia pestis KIM y3808 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0021 YP_0022 YP0022 hemN1 hemN1 28771 30150 + oxygen-independent coproporphyrinogen III oxidase similar to Yersinia pestis CO92 hemN. Contains Oxygen-independent coproporphyrinogen III oxidase HemN (Interpro|IPR004558%2C (GO:0006779)). Contains Elongator protein 3/MiaB/NifB (Interpro|IPR006638) gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0022 YP_0023 YP0023 ntrC ntrC 30204 31685 - nitrogen regulation protein similar to Yersinia pestis CO92 ntrC and Yersinia pestis KIM glnG. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Sigma-54 factor interaction domain (Interpro|IPR002078%2C (GO:0000160)%2C (GO:0003677)%2C (GO:0006355)). Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0023 YP_0024 YP0024 ntrB ntrB 31624 32703 - Two component regulatory protein involved in nitrogen assimilation similar to Yersinia pestis KIM glnL and similar to Yersinia pestis CO92 ntrB (residues 11 to 359 of 359 are similar to residues 1 to 349 of 349 from Yersinia pestis CO92 ntrB). Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0024 YP_0025 YP0025 glnA glnA 32926 34335 - glutamine synthetase similar to Yersinia pestis CO92 glnA and Yersinia pestis KIM glnA. Contains Glutamine synthetase class-I%2C adenylation site (Interpro|IPR001637%2C (GO:0006807)). Contains Glutamine synthetase (Interpro|IPR001691%2C (GO:0009399)). Contains Glutamine synthetase type I (Interpro|IPR004809%2C (GO:0009399)) gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0025 YP_0027 YP0027 bipA bipA 34897 36720 + putative GTPase similar to Yersinia pestis CO92 bipA and Yersinia pestis KIM y3803. Contains Elongation factor G%2C C-terminal (Interpro|IPR000640%2C (GO:0006414)). Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains GTP-binding protein TypA (Interpro|IPR006298) gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0027 YP_0028 YP0028 YP_0028 37042 37632 + putative hydrolases of the HAD superfamily similar to Yersinia pestis CO92 YPO0027 and Yersinia pestis KIM y3802. Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402) gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0028 YP_0029 YP0029 rbn1 rbn1 37669 38613 + ribonuclease BN similar to Yersinia pestis CO92 rbn and Yersinia pestis KIM rbn. Contains Ribonuclease BN (Interpro|IPR004664%2C (GO:0004540)) gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0029 YP_0030 YP0030 dtd dtd 38620 39057 + D-Tyr-tRNAtyr deacylase similar to Yersinia pestis CO92 YPO0029 and Yersinia pestis KIM y3800. Contains D-tyrosyl-tRNA(Tyr) deacylase (Interpro|IPR003732) gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0030 YP_0031 YP0031 dnaC_1 dnaC_1 39131 39913 - putative IS100 transposase similar to Yersinia pestis CO92 YPO1969 and Yersinia pestis KIM y1853. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0031 YP_0032 YP0032 YP_0032 39910 40932 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO1968 and Yersinia pestis KIM y0110. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0032 YP_0033 YP0033 wecD1 wecD1 41326 42126 + conserved membrane protein similar to Yersinia pestis CO92 YPO0032 and Yersinia pestis KIM y0109. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0033 YP_0034 YP0034 YP_0034 42261 43616 - putative exported protein similar to Yersinia pestis CO92 YPO0033 and Yersinia pestis KIM y0108. gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0034 YP_0035 YP0035 uraA uraA 44118 45527 - putative membrane permease similar to Yersinia pestis CO92 YPO0034. Contains Xanthine/uracil permease family (Interpro|IPR006042%2C (GO:0016020)). Contains Xanthine/uracil/vitamin C permease family (Interpro|IPR006043%2C (GO:0016020)) gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0035 YP_0036 YP0036 gltS gltS 45741 46955 + sodium/glutamate symport carrier protein similar to Yersinia pestis CO92 gltS and Yersinia pestis KIM gltS. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Kv channel (Interpro|IPR003968%2C (GO:0008076)). Contains Sodium/glutamate symporter (Interpro|IPR004445%2C (GO:0016021)) gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0036 YP_0037 YP0037 recG recG 47321 49402 - ATP-dependent DNA helicase similar to Yersinia pestis CO92 recG and Yersinia pestis KIM recG. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains OB-fold nucleic acid binding domain (Interpro|IPR004365%2C (GO:0003676)). Contains ATP-dependent DNA helicase RecG (Interpro|IPR004609%2C (GO:0006310)) gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0037 YP_0038 YP0038 trmH trmH 49403 50095 - tRNA (guanosine-2'-O-)-methyltransferase similar to Yersinia pestis CO92 trmH and Yersinia pestis KIM spoU. Contains tRNA/rRNA methyltransferase (SpoU) (Interpro|IPR001537%2C (GO:0008173)) gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0038 YP_0039 YP0039 spoT spoT 50101 52209 - guanosine-3'%2C5'-bisbis(diphosphate) 3'-pyrophosphydrolase similar to Yersinia pestis CO92 spoT and Yersinia pestis KIM spoT. Contains Metal dependent phosphohydrolase%2C HD region (Interpro|IPR003607%2C (GO:0003824)). Contains TGS domain (Interpro|IPR004095). Contains RelA/SpoT family protein (Interpro|IPR004811%2C (GO:0015969)). Contains Metal-dependent phosphohydrolase%2C HD region (Interpro|IPR006674) gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0039 YP_0040 YP0040 rpoZ rpoZ 52229 52504 - DNA-directed RNA polymerase%2C omega chain similar to Yersinia pestis CO92 rpoZ and Yersinia pestis KIM rpoZ. Contains RNA polymerase%2C omega subunit (Interpro|IPR003716%2C (GO:0006350)). Contains RNA polymerase Rpb6 (Interpro|IPR006110%2C (GO:0006351)) gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0040 YP_0041 YP0041 gmk gmk 52559 53182 - guanylate kinase similar to Yersinia pestis CO92 gmk and Yersinia pestis KIM gmk. Contains Guanylate kinase (Interpro|IPR000619). Contains Adenylate kinase (Interpro|IPR000850%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0041 YP_0042 YP0042 lig lig 53583 55286 + putative DNA ligase similar to Yersinia pestis CO92 YPO0041 and Yersinia pestis KIM y0100. Contains Helix-hairpin-helix motif (Interpro|IPR000445%2C (GO:0003677)). Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)). Contains NAD-dependent DNA ligase (Interpro|IPR001679%2C (GO:0006281)). Contains NAD-dependent DNA ligase OB-fold domain (Interpro|IPR004150%2C (GO:0006281)) gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0042 YP_0043 YP0043 YP_0043 55299 55922 - putative membrane protein similar to Yersinia pestis CO92 YPO0042 and Yersinia pestis KIM y0099. Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains Domain of unknown function UPF0126 (Interpro|IPR005115) gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0043 YP_0044 YP0044 YP_0044 56325 57188 - putative stress-induced protein similar to Yersinia pestis CO92 YPO0043 and Yersinia pestis KIM y0098. Contains Conserved hypothetical protein 255 (Interpro|IPR005229) gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0044 YP_0045 YP0045 rph rph 57315 58031 + ribonuclease PH similar to Yersinia pestis CO92 rph and Yersinia pestis KIM rph. Contains 3' exoribonuclease (Interpro|IPR001247%2C (GO:0006396)). Contains Ribonuclease PH (Interpro|IPR002381%2C (GO:0008033)) gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0045 YP_0046 YP0046 pyrE pyrE 58198 58845 + orotate phosphoribosyltransferase similar to Yersinia pestis CO92 pyrE and Yersinia pestis KIM pyrE. Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Purine/pyrimidine phosphoribosyl transferase (Interpro|IPR002375). Contains Orotate phosphoribosyl transferase (Interpro|IPR004467%2C (GO:0006221)) gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0046 YP_0047 YP0047 ttk ttk 58980 59576 - TetR-family regulatory protein similar to Yersinia pestis CO92 ttk and Yersinia pestis KIM ttk. Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0047 YP_0048 YP0048 dut dut 59698 60168 - deoxyuridine 5'-triphosphate nucleotidohydrolase similar to Yersinia pestis CO92 dut and to Yersinia pestis KIM dut. Contains DeoxyUTP pyrophosphatase (Interpro|IPR001428%2C (GO:0006399)) gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0048 YP_0049 YP0049 dfp dfp 60134 61351 - DNA/pantothenate metabolism flavoprotein similar to Yersinia pestis CO92 dfp and Yersinia pestis KIM dfp. Contains Flavoprotein (Interpro|IPR003382). Contains DNA/pantothenate metabolism flavoprotein (Interpro|IPR005252). Contains DNA/pantothenate metabolism flavoprotein%2C C terminal (Interpro|IPR007085) gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0049 YP_0050 YP0050 radC radC 61545 62213 + putative DNA repair protein similar to Yersinia pestis CO92 radC and Yersinia pestis KIM radC. Contains DNA repair protein RadC (Interpro|IPR001405%2C (GO:0006281)) gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0050 YP_0051 YP0051 rpmB rpmB 62476 62712 + 50S ribosomal protein L28 similar to Yersinia pestis CO92 rpmB. Contains Ribosomal protein L28 (Interpro|IPR001383%2C (GO:0006412)) gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0051 YP_0052 YP0052 rpmG rpmG 62724 62891 + 50S ribosomal protein L33 similar to Yersinia pestis CO92 rpmG and Yersinia pestis KIM rpmG. Contains Ribosomal protein L33 (Interpro|IPR001705%2C (GO:0006412)) gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0052 YP_0053 YP0053 mutM mutM 62974 63783 + formamidopyrimidine-DNA glycosylase similar to Yersinia pestis CO92 mutM and Yersinia pestis KIM mutM. Contains Formamidopyrimidine-DNA glycolase (Interpro|IPR000191%2C (GO:0006281)). Contains Formamidopyrimidine-DNA glycolase%2C zinc binding domain (Interpro|IPR000214%2C (GO:0006281)%2C (GO:0008270)) gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0053 YP_0054 YP0054 coaD coaD 63789 64268 - phosphopantetheine adenylyltransferase similar to Yersinia pestis CO92 coaD and Yersinia pestis KIM kdtB. Contains Coenzyme A biosynthesis protein (Interpro|IPR001980%2C (GO:0015937)). Contains Cytidylyltransferase (Interpro|IPR004820%2C (GO:0009058)%2C (GO:0016779)). Contains Cytidyltransferase-related domain (Interpro|IPR004821) gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0054 YP_0055 YP0055 kdtX kdtX 64265 65047 - lipopolysaccharide core biosynthesis glycosyl transferase similar to Yersinia pestis CO92 kdtX and Yersinia pestis KIM y0087. Contains Glycosyl transferase%2C family 2 (Interpro|IPR001173) gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0055 YP_0056 YP0056 kdtA kdtA 65048 66433 - 3-deoxy-D-manno-octulosonic-acid transferase similar to Yersinia pestis CO92 kdtA and Yersinia pestis KIM kdtA. Contains Glycosyl transferase%2C family 1 (Interpro|IPR001296%2C (GO:0009058)) gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0056 YP_0057 YP0057 rfaC rfaC 66745 67734 - lipopolysaccharide heptosyltransferase-1 similar to Yersinia pestis KIM rfaC and similar to Yersinia pestis CO92 rfaC (residues 9 to 329 of 329 are similar to residues 1 to 321 of 321 from Yersinia pestis CO92 rfaC). Contains Glycosyl transferase%2C family 9 (Interpro|IPR002201) gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0057 YP_0058 YP0058 rfaF rfaF 67710 68786 - ADP-heptose--LPS heptosyltransferase II similar to Yersinia pestis CO92 rfaF and Yersinia pestis KIM rfaF. Contains Glycosyl transferase%2C family 9 (Interpro|IPR002201) gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0058 YP_0059 YP0059 rfaD rfaD 68805 69746 - ADP-L-glycero-D-manno-heptose-6-epimerase similar to Yersinia pestis CO92 rfaD and Yersinia pestis KIM rfaD. Contains NAD binding site (Interpro|IPR000205). Contains NAD-dependent epimerase/dehydratase (Interpro|IPR001509%2C (GO:0009225)) gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0059 YP_0060 YP0060 kbl kbl 69953 71194 + 2-amino-3-ketobutyrate coenzyme A ligase similar to Yersinia pestis CO92 kbl and Yersinia pestis KIM kbl. Contains Aminotransferase%2C class-II (Interpro|IPR001917%2C (GO:0008152)%2C (GO:0016740)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0060 YP_0061 YP0061 tdh1 tdh1 71204 72229 + threonine 3-dehydrogenase similar to Yersinia pestis CO92 tdh and Yersinia pestis KIM tdh. Contains NAD binding site (Interpro|IPR000205). Contains Zinc-containing alcohol dehydrogenase superfamily (Interpro|IPR002085%2C (GO:0008270)). Contains Zinc-containing alcohol dehydrogenase (Interpro|IPR002328%2C (GO:0008270)). Contains L-threonine 3-dehydrogenase (Interpro|IPR004627%2C (GO:0008270)%2C (GO:0008743)) gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0061 YP_0062 YP0062 YP_0062 72367 73301 - similar to gi|16766991|ref|NP_462606.1| (NC_003197) putative periplasmic protein [Salmonella typhimurium LT2] (len:320 aa).There is a frameshift after codon 97. The sequece has been checked and believed to be correct. Contains Protein of unknown function DUF610 (Interpro|IPR006837) pseudogene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0062 YP_0063 YP0063 nlpD1 nlpD1 73325 74695 - putative membrane protein similar to Yersinia pestis KIM y0078 and similar to Yersinia pestis CO92 YPO0063. Contains Tropomyosin (Interpro|IPR000533). Contains Peptidase M23/M37 (Interpro|IPR002886%2C (GO:0006508)) gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0063 YP_0064 YP0064 gpmI gpmI 74705 76252 - 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase similar to Yersinia pestis CO92 YPO0064 and Yersinia pestis KIM y0077. Contains Phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent (Interpro|IPR005995%2C (GO:0006007)). Contains Metalloenzyme (Interpro|IPR006124%2C (GO:0005505)) gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0064 YP_0065 YP0065 pspE1 pspE1 76649 77083 + putative membrane protein similar to Yersinia pestis CO92 YPO0065 and Yersinia pestis KIM y0076. Contains Rhodanese-like (Interpro|IPR001763) gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0065 YP_0066 YP0066 grxC grxC 77202 77450 + glutaredoxin similar to Yersinia pestis CO92 grxC and Yersinia pestis KIM grxC. Contains Glutaredoxin (Interpro|IPR002109%2C (GO:0006118)%2C (GO:0009491)) gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0066 YP_0067 YP0067 secB secB 77538 78014 + protein-export protein similar to Yersinia pestis CO92 secB and Yersinia pestis KIM secB. Contains Bacterial protein export chaperone SecB (Interpro|IPR003708%2C (GO:0015031)) gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0067 YP_0068 YP0068 gpsA gpsA 78014 79033 + glycerol-3-phosphate dehydrogenase similar to Yersinia pestis CO92 gpsA and Yersinia pestis KIM gpsA gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0068 YP_0070 YP0070 cysE cysE 79296 80120 + serine acetyltransferase similar to Yersinia pestis CO92 cysE and Yersinia pestis KIM cysE. Contains Bacterial transferase hexapeptide repeat (Interpro|IPR001451). Contains Serine O-acetyltransferase (Interpro|IPR005881%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006535)%2C (GO:0009001)) gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0070 YP_0071 YP0071 cspR cspR 80243 80731 - putative methyltransferase similar to Yersinia pestis CO92 YPO0071 and Yersinia pestis KIM y0071. Contains tRNA/rRNA methyltransferase (SpoU) (Interpro|IPR001537%2C (GO:0008173)). Contains RNA methyltransferase TrmH family%2C group 2 (Interpro|IPR004440%2C (GO:0009451)). gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0071 YP_0072 YP0072 ada ada 80920 81984 + bifunctional regulatory protein/DNA repair protein similar to Yersinia pestis CO92 YPO0072 and Yersinia pestis KIM ada. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains Methylated-DNA-[protein]-cysteine S-methyltransferase (Interpro|IPR001497%2C (GO:0006281)). Contains Metal binding domain of Ada (Interpro|IPR004026%2C (GO:0008270)) gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0072 YP_0073 YP0073 cpxA cpxA 82033 83409 - two component sensor kinase similar to Yersinia pestis CO92 cpxA and Yersinia pestis KIM cpxA. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0073 YP_0074 YP0074 cpxR1 cpxR1 83406 84128 - two component system response regulatory protein similar to Yersinia pestis CO92 cpxR and Yersinia pestis KIM cpxR. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0074 YP_0075 YP0075 cpxP cpxP 84278 84766 + putative exported protein similar to Yersinia pestis CO92 cpxP and Yersinia pestis KIM y0066. gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0075 YP_0076 YP0076 YP_0076 85223 85399 + hypothetical protein similar to Yersinia pestis KIM y0063. gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0076 YP_0077 YP0077 YP_0077 85444 86403 + hypothetical protein similar to Yersinia pestis CO92 YPO0076 and Yersinia pestis KIM y0062. Contains Putative transposase%2C YhgA-like (Interpro|IPR006842) gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0077 YP_0078 YP0078 YP_0078 86471 86593 - putative transposase similar to Yersinia pestis KIM y0061. gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0078 YP_0079 YP0079 mMT11 mMT11 86965 87867 + putative integral membrane protein similar to Yersinia pestis CO92 YPO0077 and Yersinia pestis KIM y0060. Contains Cation efflux protein (Interpro|IPR002524%2C (GO:0006812)%2C (GO:0016020)) gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0079 YP_0080 YP0080 pfkA pfkA 88085 89068 + 6-phosphofructokinase similar to Yersinia pestis CO92 pfkA and Yersinia pestis KIM pfkA. Contains Phosphofructokinase (Interpro|IPR000023%2C (GO:0006096)) gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0080 YP_0081 YP0081 sbp sbp 89256 90278 + exported sulfate-binding protein similar to Yersinia pestis KIM sbp. Contains Prokaryotic sulfate-/thiosulfate-binding protein (Interpro|IPR000957%2C (GO:0030288)). Contains Thiosulphate-binding protein (Interpro|IPR005669%2C (GO:0008272)%2C (GO:0030288)). Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0081 YP_0082 YP0082 modA1 modA1 90528 91346 - ABC-type molybdate transport system%2C periplasmic component similar to Yersinia pestis CO92 YPO0080 and Yersinia pestis KIM modA. gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0082 YP_0083 YP0083 citT1 citT1 91422 92849 - putative membrane transport protein similar to Yersinia pestis CO92 YPO0081 and Yersinia pestis KIM y0056. Contains Sodium/sulphate symporter (Interpro|IPR001898%2C (GO:0016020)) gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0083 YP_0084 YP0084 YP_0084 92915 95587 - similar to Yersinia pestis CO92 YPO0082 and Yersiniapestis KIM y0055%3B disrupted by the insertion of an IS100 element pseudogene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0084 YP_0085 YP0085 dnaC_2 dnaC_2 93209 93988 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersiniapestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0085 YP_0086 YP0086 YP_0086 93988 95010 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0086 YP_0087 YP0087 YP_0087 95584 96405 - putative proteins%2C LmbE homologs similar to Yersinia pestis CO92 YPO0083 and Yersiniapestis KIM y0054. Contains LmbE-like protein (Interpro|IPR003737) gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0087 YP_0088 YP0088 lysR1 lysR1 96398 97693 + putative transcriptional regulator similar to Yersinia pestis CO92 YPO0084 and Yersinia pestis KIM y0053. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0088 YP_0089 YP0089 tpiA tpiA 97925 98692 - triosephosphate isomerase similar to Yersinia pestis CO92 tpiA and Yersinia pestis KIM tpiA. Contains Triosephosphate isomerase (Interpro|IPR000652%2C (GO:0008152)) gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0089 YP_0090 YP0090 YP_0090 98821 99456 - putative exported protein similar to Yersinia pestis CO92 YPO0086 gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0090 YP_0091 YP0091 YP_0091 99538 100038 + conserved membrane protein similar to Yersinia pestis CO92 YPO0087 and Yersinia pestis KIM y0050. gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0091 YP_0092 YP0092 fpr fpr 100379 101125 - ferredoxin--NADP reductase similar to Yersinia pestis CO92 fpr and Yersinia pestis KIM fpr. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)). Contains Phenol hydroxylase reductase (Interpro|IPR001221%2C (GO:0006118)). Contains Oxidoreductase FAD/NAD(P)-binding (Interpro|IPR001433%2C (GO:0006118)%2C (GO:0008246)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)) gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0092 YP_0093 YP0093 glpX glpX 101280 102398 - fructose 1%2C6-bisphosphatase II similar to Yersinia pestis KIM glpX. Contains GlpX protein (Interpro|IPR004464%2C (GO:0006071)) gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0093 YP_0094 YP0094 glpK1 glpK1 102527 104050 - glycerol kinase similar to Yersinia pestis KIM glpK. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains Glycerol kinase (Interpro|IPR005999%2C (GO:0006072)). Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0094 YP_0095 YP0095 glpF glpF 104227 105075 - glycerol uptake facilitator protein similar to Yersinia pestis CO92 glpF and Yersinia pestis KIM glpF. Contains MIP family (Interpro|IPR000425%2C (GO:0016020)) gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0095 YP_0097 YP0097 YP_0097 105687 105926 + hypothetical protein similar to Yersinia pestis CO92 YPO0093 and Yersinia pestis KIM y0045 gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0097 YP_0098 YP0098 tnp_2 tnp_2 106134 106643 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3861. Contains Transposase IS200-like (Interpro|IPR002686). gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0098 YP_0099 YP0099 YP_0099 106769 106975 + hypothetical protein no significant database match found gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0099 YP_0100 YP0100 sunT sunT 106984 109098 - putative secretion ATPase similar to Yersinia pestis KIM y0286. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Peptidase family C39%2C N-terminal leader (Interpro|IPR005074%2C (GO:0016021)). Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0100 YP_0101 YP0101 acrA1 acrA1 109091 110407 - putative secretion permease similar to Yersinia pestis KIM y0287. Contains Gram-negative bacterial RTX secretion protein D (Interpro|IPR003997%2C (GO:0009306)%2C (GO:0016020)). Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)). Contains HlyD secretion protein%2C C-terminal (Interpro|IPR006144%2C (GO:0016020)) gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0101 YP_0102 YP0102 YP_0102 110596 110835 + hypothetical protein similar to Yersinia pestis CO92 YPO0100 and Yersinia pestis KIM y0288. gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0102 YP_0103 YP0103 YP_0103 111010 111159 + putative membrane protein similar to Yersinia pestis CO92 YPO0101 and Yersinia pestis KIM y0289 gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0103 YP_0104 YP0104 YP_0104 111462 112049 + putative exported protein similar to Yersinia pestis CO92 YPO0102. gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0104 YP_0105 YP0105 menG menG 112166 112651 - S-adenosylmethionine:2-demethylmenaquinone methyltransferase similar to Yersinia pestis CO92 menG and Yersinia pestis KIM menG. Contains Dimethylmenaquinone methyltransferase (Interpro|IPR005493) gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0105 YP_0106 YP0106 menA menA 112793 113722 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase similar to Yersinia pestis KIM menA. Contains UbiA prenyltransferase (Interpro|IPR000537). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase (Interpro|IPR004657%2C (GO:0016021)%2C (GO:0016740)) gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0106 YP_0107 YP0107 hslU hslU 113946 115277 - ATP-binding heat shock protein similar to Yersinia pestis CO92 hslU and Yersinia pestis KIM hslU. Contains CbxX/CfqX superfamily (Interpro|IPR000641%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Heat shock protein HslVU (Interpro|IPR004491%2C (GO:0009377)) gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0107 YP_0108 YP0108 hslV hslV 115348 115872 - heat shock protein similar to Yersinia pestis CO92 hslV and Yersinia pestis KIM hslV. Contains Proteasome B-type subunit (Interpro|IPR000243%2C (GO:0006511)). Contains Multispecific proteasome protease (Interpro|IPR001353%2C (GO:0006511)) gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0108 YP_0109 YP0109 ftsN ftsN 115972 116817 - cell division protein similar to Yersinia pestis CO92 ftsN and Yersinia pestis KIM ftsN. Contains Proline-rich region (Interpro|IPR000694) gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0109 YP_0110 YP0110 cytR1 cytR1 116883 117911 - transcriptional repressor similar to Yersinia pestis CO92 cytR and Yersinia pestis KIM cytR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761). Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0110 YP_0111 YP0111 priA priA 118264 120462 - primosomal protein n' similar to Yersinia pestis CO92 priA and Yersinia pestis KIM priA. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Primosomal protein n (Interpro|IPR005259) gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0111 YP_0112 YP0112 rpmE1 rpmE1 120715 120930 + 50S ribosomal protein L31 similar to Yersinia pestis CO92 rpmE. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Ribosomal protein L31 (Interpro|IPR002150%2C (GO:0006412)) gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0112 YP_0113 YP0113 YP_0113 121473 121940 - hypothetical protein similar to Yersinia pestis KIM y0300 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0113 YP_0116 YP0116 metJ metJ 122277 122594 - transcriptional repressor protein similar to Yersinia pestis CO92 metJ and Yersinia pestis KIM metJ. Contains Methionine repressor MetJ (Interpro|IPR002084%2C (GO:0006555)) gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0116 YP_0117 YP0117 metC1 metC1 122891 124132 + Cystathionine beta-lyases/cystathionine gamma-synthases Best Blastp hit %3D gi|16131777|ref|NP_418374.1| (NC_000913) cystathionine gamma-synthase [Escherichia coli K12]%2C gi|127030|sp|P00935|METB_ECOLI Cystathionine gamma-synthase (CGS) (O-succinylhomoserine (Thiol)-lyase)%2C gi|68356|pir||SYECCG O-succinylhomoserine (thiol)-lyase (EC 4.2.99.9) - Escherichia coli%2C gi|146846|gb|AAA24167.1| (K01547) cystathione gamma-synthase [Escherichia coli]%2C gi|305042|gb|AAB03071.1| (L19201) cystathionine gamma-synthase [Escherichia coli]%2C gi|1790375|gb|AAC76921.1| (AE000468) cystathionine gamma-synthase [Escherichia coli K12]%2C(len:386 aa)%3B. Contains Cys/Met metabolism pyridoxal-phosphate-dependent enzymes (Interpro|IPR000277%2C (GO:0006520)) gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0117 YP_0118 YP0118 metL metL 124135 126570 + bifunctional aspartokinase/homoserine dehydrogenase II similar to Yersinia pestis CO92 metL and Yersinia pestis KIM metL. Contains Aspartate/glutamate/uridylate kinase (Interpro|IPR001048%2C (GO:0008652)). Contains Aspartate kinase (Interpro|IPR001341%2C (GO:0008652)). Contains Homoserine dehydrogenase (Interpro|IPR001342%2C (GO:0008652)). Contains Homoserine dehydrogenase%2C NAD binding domain (Interpro|IPR005106) gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0118 YP_0119 YP0119 metF1 metF1 126803 127687 + 5%2C10-methylenetetrahydrofolate reductase similar to Yersinia pestis CO92 metF and Yersinia pestis KIM metF. Contains Methylenetetrahydrofolate reductase (Interpro|IPR003171%2C (GO:0006555)). Contains 5%2C10-methylenetetrahydrofolate reductase (Interpro|IPR004620%2C (GO:0009086)) gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0119 YP_0120 YP0120 tra5A tra5A 127865 128650 - transposase for insertion sequence IS1661 similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0120 YP_0121 YP0121 YP_0121 128704 129348 - insertion element IS1661 DNA-binding protein similar to Yersinia pestis CO92 YPO0996 and Yersinia pestis KIM y3896. gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0121 YP_0122 YP0122 glpR1 glpR1 129412 130170 - glycerol-3-phosphate repressor protein similar to Yersinia pestis CO92 glpR and Yersinia pestis KIM glpR. Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0122 YP_0123 YP0123 glpG glpG 130205 131041 - putative membrane protein similar to Yersinia pestis CO92 YPO0121 and Yersinia pestis KIM glpG. Contains Rhomboid-like protein (Interpro|IPR002610) gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0123 YP_0124 YP0124 glpE glpE 131059 131493 - thiosulfate sulfurtransferase similar to Yersinia pestis CO92 YPO0122 and Yersinia pestis KIM glpE. Contains Rhodanese-like (Interpro|IPR001763) gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0124 YP_0125 YP0125 malT malT 131763 134474 - maltose regulon positive regulatory protein similar to Yersinia pestis CO92 malT and Yersinia pestis KIM malT. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)) gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0125 YP_0126 YP0126 malP malP 134792 137196 + similar to gi|16766802|ref|NP_462417.1| (NC_003197) maltodextrin phosphorylase [Salmonella typhimurium LT2] (len:797 aa). Contains a frameshift after codon 107.The sequence has been checked and is believed to be correct. Contains Glycosyl transferase%2C family 35 (Interpro|IPR000811%2C (GO:0005975)) . Contains Glycosyl transferase%2C family 35 (Interpro|IPR000811%2C (GO:0005975)) pseudogene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0126 YP_0127 YP0127 malQ malQ 137209 139305 + 4-alpha-glucanotransferase similar to Yersinia pestis CO92 malQ and Yersinia pestis KIM malQ. Contains Glycoside hydrolase%2C family 77 (Interpro|IPR003385%2C (GO:0005975)) gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0127 YP_0128 YP0128 YP_0128 139634 140209 - Thioredoxin-like proteins and domains similar to Yersinia pestis CO92 YPO0127 and Yersinia pestis KIM y3903. Contains Protein of unknown function%2C HesB/YadR/YfhF (Interpro|IPR000361%2C (GO:0005554)). Contains Nitrogen-fixing NifU%2C C-terminal (Interpro|IPR001075) gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0128 YP_0129 YP0129 comFC comFC 140269 140970 - putative amidophosphoribosyltransferases similar to Yersinia pestis CO92 YPO0128 and Yersinia pestis KIM y3906 gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0129 YP_0130 YP0130 bioH bioH 141036 141833 + putative biotin biosynthesis protein similar to Yersinia pestis CO92 bioH and Yersinia pestis KIM bioH. Contains Alpha/beta hydrolase fold (Interpro|IPR000073). Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Alpha/beta hydrolase (Interpro|IPR003089%2C (GO:0006725)%2C (GO:0016787)) gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0130 YP_0131 YP0131 YP_0131 141994 142272 + putative exported protein similar to Yersinia pestis CO92 YPO0130 and Yersinia pestis KIM y3909. gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0131 YP_0132 YP0132 YP_0132 142410 142667 - hypothetical protein similar to Yersinia pestis CO92 YPO0131 and Yersinia pestis KIM feoC gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0132 YP_0133 YP0133 feoB feoB 142703 145018 - ferrous iron transport protein B similar to Yersinia pestis CO92 feoB and Yersinia pestis KIM feoB. Contains Uridine kinase (Interpro|IPR000764%2C (GO:0006224)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ferrous iron transport protein B (Interpro|IPR003373%2C (GO:0016020)). Contains Small GTP-binding protein domain (Interpro|IPR005225) gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0133 YP_0134 YP0134 feoA feoA 145110 145337 - putative ferrous iron transport protein A similar to Yersinia pestis CO92 feoA and Yersinia pestis KIM feoA gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0134 YP_0135 YP0135 YP_0135 145861 148236 - putative RNA binding protein%2C Contains S1 domain similar to Yersinia pestis CO92 YPO0134 and Yersinia pestis KIM y3913. Contains Ribosomal protein S1 (Interpro|IPR000110%2C (GO:0006412)). Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains Ribonuclease RNase H fold containing (Interpro|IPR006641) gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0135 YP_0136 YP0136 greB greB 148770 149285 + transcription elongation factor similar to Yersinia pestis CO92 greB and Yersinia pestis KIM greB. Contains Prokaryotic transcription elongation factor GreA/GreB (Interpro|IPR001437%2C (GO:0006355)). Contains Prokaryotic transcription elongation factor GreB (Interpro|IPR006358) gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0136 YP_0137 YP0137 ompR1 ompR1 149421 150140 + transcriptional regulatory protein similar to Yersinia pestis CO92 ompR and Yersinia pestis KIM ompR. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0137 YP_0138 YP0138 envZ envZ 150137 151489 + osmolarity sensor protein similar to Yersinia pestis CO92 envZ and Yersinia pestis KIM envZ. Contains Basic helix-loop-helix dimerization domain bHLH (Interpro|IPR001092). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0138 YP_0139 YP0139 pckA pckA 151624 153243 - phosphoenolpyruvate carboxykinase (ATP) similar to Yersinia pestis CO92 pckA and Yersinia pestis KIM pckA. Contains Phosphoenolpyruvate carboxykinase (ATP) (Interpro|IPR001272%2C (GO:0006094)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0139 YP_0140 YP0140 hslO hslO 153440 154321 - heat-shock chaperonin similar to Yersinia pestis CO92 hslO and Yersinia pestis KIM y3919. Contains Hsp33 protein (Interpro|IPR000397) gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0140 YP_0141 YP0141 hslR hslR 154484 154891 - heat shock protein 15 similar to Yersinia pestis CO92 hslR and Yersinia pestis KIM y3920. Contains RNA-binding S4 (Interpro|IPR002942%2C (GO:0003723)) gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0141 YP_0142 YP0142 YP_0142 154920 155600 - putative hydrolases of the HAD superfamily similar to Yersinia pestis CO92 YPO0141 and Yersinia pestis KIM y3921. Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402) gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0142 YP_0143 YP0143 YP_0143 155744 157891 - putative membrane protein similar to Yersinia pestis CO92 YPO0142 and Yersinia pestis KIM y3922 gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0143 YP_0144 YP0144 YP_0144 158171 158365 + hypothetical protein similar to Yersinia pestis CO92 YPO0143 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0144 YP_0145 YP0145 mutT1 mutT1 158478 159023 + putative hydrolase similar to Yersinia pestis CO92 YPO0144 and Yersinia pestis KIM y3923. Contains NUDIX hydrolase (Interpro|IPR000086). Contains Isopentenyl-diphosphate delta-isomerase (Interpro|IPR002667%2C (GO:0008299)) gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0145 YP_0146 YP0146 mrcA1 mrcA1 159159 161714 - penicillin-binding protein similar to Yersinia pestis CO92 mrcA and Yersinia pestis KIM mrcA. Contains Glycosyl transferase%2C family 51 (Interpro|IPR001264%2C (GO:0009274)). Contains Penicillin-binding protein%2C transpeptidase domain (Interpro|IPR001460%2C (GO:0008233)%2C (GO:0008658)%2C (GO:0009273)) gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0146 YP_0147 YP0147 ftsA1 ftsA1 161789 162730 + putative ATPases of the HSP70 class involved in cell division similar to Yersinia pestis CO92 YPO0146 and Yersinia pestis KIM y3925 gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0147 YP_0148 YP0148 YP_0148 162748 163335 + putative membrane protein similar to Yersinia pestis CO92 YPO0147 and Yersinia pestis KIM y3927. gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0148 YP_0149 YP0149 YP_0149 163283 163909 + hypothetical protein similar to Yersinia pestis KIM y3928. Contains Tumor Necrosis Factor (Interpro|IPR006052%2C (GO:0016020)) gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0149 YP_0150 YP0150 YP_0150 163875 164303 + hypothetical protein similar to Yersinia pestis KIM y3929 gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0150 YP_0151 YP0151 YP_0151 164306 164695 - hypothetical protein similar to Yersinia pestis KIM y3931. gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0151 YP_0152 YP0152 gspD1 gspD1 164730 165854 + putative membrane transport protein similar to Yersinia pestis CO92 YPO0150 and Yersinia pestis KIM hofQ. Contains Bacterial general secretion pathway protein D (Interpro|IPR001775%2C (GO:0016020)). Contains Filamentous bacteriophage Vg4 protein (Interpro|IPR001814%2C (GO:0005554)). Contains Type III secretion system outer membrane G protein (Interpro|IPR003522%2C (GO:0009306)%2C (GO:0015448)). Contains Bacterial type II and III secretion system protein (Interpro|IPR004846%2C (GO:0009306)). Contains NolW-like (Interpro|IPR005644) gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0152 YP_0153 YP0153 aroK1 aroK1 166203 166724 + shikimate kinase I similar to Yersinia pestis CO92 aroK and Yersinia pestis KIM aroK. Contains Shikimate kinase (Interpro|IPR000623%2C (GO:0008652)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0153 YP_0154 YP0154 aroB aroB 166781 167869 + 3-dehydroquinate synthase similar to Yersinia pestis CO92 aroB and Yersinia pestis KIM aroB. Contains 3-dehydroquinate synthase domain (Interpro|IPR002658%2C (GO:0009073)). Contains 3-dehydroquinate synthase (Interpro|IPR006265) gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0154 YP_0155 YP0155 damX damX 168123 169112 + conserved hypothetical membrane protein similar to Yersinia pestis CO92 YPO0153 gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0155 YP_0156 YP0156 dam dam 169196 170011 + DNA adenine methylase similar to Yersinia pestis CO92 dam and Yersinia pestis KIM dam. Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C D12 class (Interpro|IPR002294%2C (GO:0008170)). gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0156 YP_0157 YP0157 rpe rpe 170302 170991 + ribulose-phosphate 3-epimerase similar to Yersinia pestis CO92 rpe and Yersinia pestis KIM rpe. Contains Ribulose-phosphate 3-epimerase (Interpro|IPR000056%2C (GO:0005975)) gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0157 YP_0158 YP0158 gph gph 170951 171682 + phosphoglycolate phosphatase similar to Yersinia pestis KIM gph. Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains 2-phosphoglycolate phosphatase%2C prokaryotic (Interpro|IPR006346). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 (Interpro|IPR006439) gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0158 YP_0159 YP0159 trpS trpS 171765 172724 + tryptophanyl-tRNA synthetase similar to Yersinia pestis CO92 trpS and Yersinia pestis KIM trpS. Contains Aminoacyl-tRNA synthetase%2C class Ib (Interpro|IPR002305%2C (GO:0006418)). Contains Tryptophanyl-tRNA synthetase%2C class Ib (Interpro|IPR002306%2C (GO:0006436)) gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0159 YP_0160 YP0160 cysG1 cysG1 172879 174291 - siroheme synthase similar to Yersinia pestis CO92 cysG. Contains Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (Interpro|IPR000878%2C (GO:0008152)%2C (GO:0008168)). Contains Uroporphiryn-III C-methyltransferase (Interpro|IPR003043%2C (GO:0006779)%2C (GO:0008168)). Contains Uroporphyrin-III C-methyltransferase%2C C-terminal (Interpro|IPR006366). Contains Siroheme synthase%2C N-terminal (Interpro|IPR006367) gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0160 YP_0161 YP0161 nirC nirC 174379 175185 - putative nitrite transporter similar to Yersinia pestis CO92 nirC and Yersinia pestis KIM nirC. Contains Formate/nitrite transporter (Interpro|IPR000292%2C (GO:0016020)) gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0161 YP_0162 YP0162 nirD nirD 175364 175690 - nitrite reductase small subunit similar to Yersinia pestis CO92 nirD and Yersinia pestis KIM nirD gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0162 YP_0163 YP0163 nirB nirB 175687 178233 - nitrite reductase similar to Yersinia pestis CO92 nirB and Yersinia pestis KIM nirB. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains Serine proteases%2C subtilase family (Interpro|IPR000209%2C (GO:0006508)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Nitrite/sulfite reductase ferredoxin-like half domain (Interpro|IPR005117). Contains Nitrite and sulfite reductase iron-sulfur/siroheme-binding site (Interpro|IPR006066%2C (GO:0006118)). Contains Nitrite and sulphite reductase 4Fe-4S domain (Interpro|IPR006067%2C (GO:0006118)) gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0163 YP_0164 YP0164 codA codA 178543 179853 + cytosine deaminase similar to Yersinia pestis CO92 codA and Yersinia pestis KIM codA. Contains Amidohydrolase (Interpro|IPR006680) gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0164 YP_0165 YP0165 proP2 proP2 179938 181122 - conserved integral membrane protein similar to Yersinia pestis CO92 YPO0163 and Yersinia pestis KIM y3947. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0165 YP_0166 YP0166 cirA1 cirA1 181608 183668 + putative membrane receptor protein similar to Yersinia pestis CO92 YPO0164 and Yersinia pestis KIM y3948. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0166 YP_0167 YP0167 purR2 purR2 183757 184743 - LacI-family transcriptional regulator similar to Yersinia pestis CO92 YPO0165 and Yersinia pestis KIM y3949. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0167 YP_0168 YP0168 YP_0168 184992 186305 - similar to Yersinia pestis CO92 YPO0166 and Yersinia pestis KIM y3950. This CDS Contains a nonsense mutation at codon 193. The sequence has been checked and is believed to be correct. Contains Glycoside hydrolase%2C family 4 (Interpro|IPR001088%2C (GO:0005975)) pseudogene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0168 YP_0169 YP0169 ppiA ppiA 186791 187390 + peptidyl-prolyl cis-trans isomerase A similar to Yersinia pestis CO92 ppiA and Yersinia pestis KIM ppiA. Contains Peptidyl-prolyl cis-trans isomerase%2C cyclophilin type (Interpro|IPR002130%2C (GO:0006457)) gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0169 YP_0170 YP0170 YP_0170 187716 189257 + putative ATPase similar to Yersinia pestis CO92 YPO0168 and Yersinia pestis KIM y3952. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0170 YP_0171 YP0171 pabA pabA 189500 190075 + p-aminobenzoate synthetase%2C component II similar to Yersinia pestis KIM pabA. Contains Glutamine amidotransferase class-I (Interpro|IPR000991%2C (GO:0003824)). Contains Carbamoyl-phosphate synthase%2C GATase domain (Interpro|IPR001317). Contains Anthranilate synthase component II/delta crystallin (Interpro|IPR006220). Contains Glutamine amidotransferase of anthranilate synthase (Interpro|IPR006221) gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0171 YP_0172 YP0172 argD argD 190196 191425 + acetylornithine delta-aminotransferase similar to Yersinia pestis KIM argD. Contains Acetylornithine and succinylornithine aminotransferase (Interpro|IPR004636%2C (GO:0006525)%2C (GO:0008483)). Contains Aminotransferase class-III (Interpro|IPR005814%2C (GO:0008483)) gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0172 YP_0173 YP0173 YP_0173 191651 193771 - putative membrane protein similar to Yersinia pestis CO92 YPO0174 and Yersinia pestis KIM y3955 gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0173 YP_0174 YP0174 crp crp 193857 194489 - cAMP-regulatory protein similar to Yersinia pestis CO92 crp and Yersinia pestis KIM crp. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Cyclic nucleotide-binding domain (Interpro|IPR000595). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)). Contains cAMP-dependent protein kinase (Interpro|IPR002373%2C Cellular Component: cAMP-dependent protein kinase complex (GO:0005952)%2C (GO:0006468)%2C (GO:0008603)) gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0174 YP_0175 YP0175 YP_0175 194825 195232 + putative redox protein%2C regulator of disulfide bond formation similar to Yersinia pestis CO92 YPO0176 and Yersinia pestis KIM y3957. Contains OsmC-like protein (Interpro|IPR003718%2C (GO:0006950)) gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0175 YP_0176 YP0176 proP3 proP3 195304 195735 + Permeases of the major facilitator superfamily similar to Yersinia pestis CO92 YPO0177 and Yersinia pestis KIM y3958 gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0176 YP_0177 YP0177 prk prk 195913 196818 - phosphoribulokinase 1 similar to Yersinia pestis CO92 prk and Yersinia pestis KIM prkB. Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)). Contains Phosphoribulokinase/uridine kinase (Interpro|IPR006083%2C (GO:0016301)) gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0177 YP_0178 YP0178 YP_0178 196931 197167 - hypothetical protein similar to Yersinia pestis CO92 YPO0179 and Yersinia pestis KIM y3960 gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0178 YP_0179 YP0179 YP_0179 197164 198144 - putative hydrolase of the alpha/beta-hydrolase fold similar to Yersinia pestis CO92 YPO0180 and Yersinia pestis KIM y3961. Contains Alpha/beta hydrolase fold (Interpro|IPR000073). Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Protein of unknown function UPF0017 (Interpro|IPR000952%2C (GO:0005554)) gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0179 YP_0180 YP0180 rhtB1 rhtB1 198270 198848 + Putative threonine efflux protein similar to Yersinia pestis KIM y3962. Contains Lysine exporter protein (LYSE/YGGA) (Interpro|IPR001123%2C (GO:0016020)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)) gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0180 YP_0181 YP0181 tauA1 tauA1 199051 200109 + putative taurine-binding periplasmic protein precursor similar to Yersinia pestis CO92 tauA and Yersinia pestis KIM tauA. Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)) gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0181 YP_0182 YP0182 tauB1 tauB1 200118 200885 + putative taurine transport ATP-binding protein similar to Yersinia pestis CO92 tauB and Yersinia pestis KIM tauB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0182 YP_0183 YP0183 tauC1 tauC1 200882 201736 + putative taurine transport system permease protein similar to Yersinia pestis CO92 tauC and Yersinia pestis KIM tauC. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0183 YP_0184 YP0184 tauD tauD 201715 202581 + putative taurine dioxygenase similar to Yersinia pestis CO92 tauD and Yersinia pestis KIM tauD. Contains Taurine catabolism dioxygenase TauD/TfdA (Interpro|IPR003819%2C (GO:0006118)%2C (GO:0016491)) gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0184 YP_0185 YP0185 YP_0185 202594 203560 - similar to Yersinia pestis CO92 YPO0186 and Yersinia pestis KIM rafQ. Note this CDS Contains a possible frameshift mutation following codon 34. The sequence has been checked and is believed to be correct. pseudogene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0185 YP_0186 YP0186 wcaA wcaA 203653 204642 - putative glycosyl transferase similar to Yersinia pestis CO92 YPO0187 and Yersinia pestis KIM y3968. Contains Glycosyl transferase%2C family 2 (Interpro|IPR001173) gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0186 YP_0187 YP0187 uup1 uup1 204777 206699 - ATPase components of ABC transporters with duplicated ATPase domains Best Blastp hit %3D gi|16766748|ref|NP_462363.1| (NC_003197) putative ATPase component of ABC transporter with duplicated ATPase domain [Salmonella typhimurium LT2]%2C gi|16422016|gb|AAL22322.1| (AE008858) putative ATPase component of ABC transporter [Salmonella typhimurium LT2]%2C(len:635 aa)%3B. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Spectrin repeat (Interpro|IPR002017). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0187 YP_0188 YP0188 mdaB1 mdaB1 206947 207498 + Putative NADPH-quinone reductase (modulator of drug activity B) similar to Yersinia pestis CO92 YPO0190 and Yersinia pestis KIM y3971. Contains NAD(P)H dehydrogenase (quinone) (Interpro|IPR003680%2C (GO:0006118)) gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0188 YP_0189 YP0189 kefB kefB 207502 209310 + putative potassium-efflux system protein similar to Yersinia pestis CO92 kefB and Yersinia pestis KIM kefB. Contains TrkA-N (Interpro|IPR003148%2C (GO:0006813)). Contains Potassium efflux system protein (Interpro|IPR004771%2C (GO:0006812)%2C (GO:0016021)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)). Contains Sodium/hydrogen exchanger (Interpro|IPR006153%2C (GO:0006885)%2C (GO:0016021)) gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0189 YP_0190 YP0190 YP_0190 209326 209547 + putative nucleic-acid-binding protein containing a Zn-ribbon domain similar to Yersinia pestis CO92 YPO0192 and Yersinia pestis KIM y3973 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0190 YP_0191 YP0191 slyD slyD 209609 210223 + peptidyl-prolyl cis-trans isomerase similar to Yersinia pestis CO92 slyD and Yersinia pestis KIM slyD. Contains Peptidylprolyl isomerase%2C FKBP-type (Interpro|IPR001179). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0191 YP_0192 YP0192 proP4 proP4 210208 210408 + Permeases of the major facilitator superfamily no significant database match found gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0192 YP_0193 YP0193 slyX slyX 210444 210662 - phage lysis protein similar to Yersinia pestis KIM slyX%3B host factor for lysis of phiX174 infection gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0193 YP_0194 YP0194 fkpA fkpA 210938 211777 + peptidyl-prolyl cis-trans isomerase similar to Yersinia pestis CO92 fkpA and Yersinia pestis KIM fkpA. Contains Domain amino terminal to FKBP-type peptidyl-prolyl isomerase (Interpro|IPR000774%2C (GO:0006457)). Contains Peptidylprolyl isomerase%2C FKBP-type (Interpro|IPR001179) gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0194 YP_0195 YP0195 YP_0195 212019 212753 + putative DNA-binding protein similar to Yersinia pestis CO92 YPO0196 and Yersinia pestis KIM y3978 gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0195 YP_0196 YP0196 dsrE1 dsrE1 212753 213148 + sulfur transfer complex subunit TusD similar to Yersinia pestis CO92 YPO0197 and Yersinia pestis KIM y3979. Contains DsrE-like protein (Interpro|IPR003787) gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0196 YP_0197 YP0197 dsrF dsrF 213148 213513 + Uncharacterized protein involved in the oxidation of intracellular sulfur similar to Yersinia pestis CO92 YPO0198 and Yersinia pestis KIM y3980. Contains DsrE-like protein (Interpro|IPR003787) gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0197 YP_0198 YP0198 dsrH dsrH 213533 213820 + sulfur transfer complex subunit TusB similar to Yersinia pestis CO92 YPO0199 and Yersinia pestis KIM y3981 gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0198 YP_0199 YP0199 rpsL rpsL 213958 214332 + 30S ribosomal protein S12 similar to Yersinia pestis CO92 rpsl and Yersinia pestis KIM rpsL. Contains Ribosomal protein S12%2C bacterial and chloroplast forms (Interpro|IPR005679%2C (GO:0015935)). Contains Ribosomal protein S12/S23 (Interpro|IPR006032%2C (GO:0006412)) gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0199 YP_0200 YP0200 rpsG rpsG 214429 214899 + 30S ribosomal protein S7 similar to Yersinia pestis CO92 rpsG and Yersinia pestis KIM rpsG. Contains Ribosomal protein S7 (Interpro|IPR000235%2C (GO:0006412)). Contains Ribosomal protein S7%2C bacterial and organelle form (Interpro|IPR005717%2C (GO:0015935)) gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0200 YP_0201 YP0201 fusA fusA 214993 217101 + elongation factor G similar to Yersinia pestis CO92 fusA and Yersinia pestis KIM fusA. Contains Elongation factor G%2C C-terminal (Interpro|IPR000640%2C (GO:0006414)). Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Translation elongation factor G (Interpro|IPR004540%2C (GO:0006414)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains Elongation factor G%2C domain IV (Interpro|IPR005517%2C (GO:0005525)) gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0201 YP_0202 YP0202 tufA1 tufA1 217174 218358 + elongation factor Tu similar to Yersinia pestis CO92 tufA and Yersinia pestis KIM tufB. Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Elongation factor Tu%2C C-terminal (Interpro|IPR004160%2C (GO:0005525)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Translation elongation factor Tu (Interpro|IPR004541%2C (GO:0006414)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains Guanine nucleotide binding protein (G-protein)%2C alpha subunit (Interpro|IPR001019%2C (GO:0007186)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Elongation factor Tu%2C C-terminal (Interpro|IPR004160%2C (GO:0005525)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Translation elongation factor Tu (Interpro|IPR004541%2C (GO:0006414)) gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0202 YP_0203 YP0203 tnp_3 tnp_3 218510 219019 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase IS200-like (Interpro|IPR002686). gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0203 YP_0204 YP0204 bfd bfd 219207 219401 + putative bacterioferritin-associated ferredoxin similar to Yersinia pestis CO92 bfd gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0204 YP_0205 YP0205 bfr bfr 219480 219953 + bacterioferritin similar to Yersinia pestis CO92 bfr and Yersinia pestis KIM bfr. Contains Ferritin (Interpro|IPR001519%2C (GO:0008199)). Contains Bacterioferritin (Interpro|IPR002024%2C (GO:0008199)) gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0205 YP_0206 YP0206 rpsJ rpsJ 220367 220678 + 30S ribosomal protein S10 similar to Yersinia pestis CO92 rpsJ and Yersinia pestis KIM rpsJ. Contains Ribosomal protein S10 (Interpro|IPR001848%2C (GO:0006412)). Contains Ribosomal protein S10%2C bacterial form (Interpro|IPR005731%2C (GO:0015935)) gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0206 YP_0207 YP0207 rplC rplC 220711 221340 + 50S ribosomal protein L3 similar to Yersinia pestis CO92 rplC and Yersinia pestis KIM rplC. Contains Ribosomal protein L3 (Interpro|IPR000597%2C (GO:0006412)) gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0207 YP_0208 YP0208 rplD rplD 221357 221962 + 50S ribosomal protein L4 similar to Yersinia pestis CO92 rplD and Yersinia pestis KIM rplD. Contains Ribosomal protein L4/L1e (Interpro|IPR002136%2C (GO:0006412)) gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0208 YP_0209 YP0209 rplW rplW 221959 222261 + 50S ribosomal protein L23 similar to Yersinia pestis CO92 rplW and Yersinia pestis KIM rplW. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)). Contains Ribosomal L23 protein (Interpro|IPR001014%2C (GO:0006412)) gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0209 YP_0210 YP0210 rplB rplB 222278 223102 + 50S ribosomal protein l2 similar to Yersinia pestis CO92 rplB and Yersinia pestis KIM rplB. Contains Ribosomal protein L2 (Interpro|IPR002171%2C (GO:0006412)). Contains Ribosomal protein L2%2C bacterial and organelle form (Interpro|IPR005880%2C (GO:0016740)) gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0210 YP_0211 YP0211 rpsS rpsS 223117 223395 + 30S ribosomal protein S19 similar to Yersinia pestis CO92 rpsS. Contains Ribosomal protein S19/S15 (Interpro|IPR002222%2C (GO:0006412)). Contains Ribosomal protein S19%2C bacterial and organelle form (Interpro|IPR005732%2C (GO:0015935)) gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0211 YP_0212 YP0212 rplV rplV 223410 223742 + 50S ribosomal protein L22 similar to Yersinia pestis CO92 rplV and Yersinia pestis KIM rplV. Contains Ribosomal protein L22/L17 (Interpro|IPR001063%2C (GO:0006412)). Contains Ribosomal protein L22%2C bacterial and organelle form (Interpro|IPR005727%2C (GO:0015934)) gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0212 YP_0213 YP0213 rpsC rpsC 223760 224458 + 30S ribosomal protein S3 similar to Yersinia pestis CO92 rpsC and Yersinia pestis KIM rpsC. Contains Ribosomal protein S3 (Interpro|IPR001351%2C (GO:0006412)). Contains Type 2 KH domain (Interpro|IPR004044%2C (GO:0003676)). Contains KH domain (Interpro|IPR004087%2C (GO:0003676)). Contains Bacterial ribosomal protein S3 (Interpro|IPR005704%2C (GO:0015935)) gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0213 YP_0214 YP0214 rplP rplP 224471 224881 + 50S ribosomal protein L16 similar to Yersinia pestis CO92 rplP and Yersinia pestis KIM rplP. Contains Ribosomal protein L16 (Interpro|IPR000114%2C (GO:0006412)) gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0214 YP_0215 YP0215 rpmC rpmC 224881 225072 + 50S ribosomal protein L29 similar to Yersinia pestis CO92 rpmC and Yersinia pestis KIM rpmC. Contains Ribosomal protein L29 (Interpro|IPR001854%2C (GO:0006412)) gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0215 YP_0216 YP0216 rpsQ rpsQ 225072 225326 + 30S ribosomal protein S17 similar to Yersinia pestis CO92 YPO0219. Contains Ribosomal protein S17 (Interpro|IPR000266%2C (GO:0006412)) gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0216 YP_0217 YP0217 rplN rplN 225507 225878 + 50S ribosomal protein L14 similar to Yersinia pestis CO92 rplN and Yersinia pestis KIM rplN. Contains Ribosomal protein L14b/L23e (Interpro|IPR000218%2C (GO:0006412)). Contains Ribosomal protein L14%2C bacterial and organelle form (Interpro|IPR005745%2C (GO:0015934)) gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0217 YP_0218 YP0218 rplX rplX 225889 226203 + 50S ribosomal protein L24 similar to Yersinia pestis CO92 rplX and Yersinia pestis KIM rplX. Contains Ribosomal protein L24 (Interpro|IPR003256%2C (GO:0006412)). Contains KOW (Interpro|IPR005824). Contains Ribosomal protein L24/L26 (Interpro|IPR005825%2C (GO:0006412)). Contains KOW (Kyprides%2C Ouzounis%2C Woese) motif (Interpro|IPR006646) gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0218 YP_0219 YP0219 rplE rplE 226218 226757 + 50S ribosomal protein L5 similar to Yersinia pestis CO92 rplE and Yersinia pestis KIM rplE. Contains Ribosomal protein L5 (Interpro|IPR002132%2C (GO:0006412)). Contains Mitochondrial ribosomal protein L5 (Interpro|IPR003236%2C (GO:0006412)) gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0219 YP_0220 YP0220 rpsN rpsN 226771 227076 + 30S ribosomal protein S14 similar to Yersinia pestis CO92 rpsN and Yersinia pestis KIM rpsN. Contains Ribosomal protein S14 (Interpro|IPR001209%2C (GO:0006412)) gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0220 YP_0221 YP0221 rpsH rpsH 227110 227502 + 30S ribosomal protein S8 similar to Yersinia pestis CO92 rpsH and Yersinia pestis KIM rpsH. Contains Ribosomal protein S8 (Interpro|IPR000630%2C (GO:0006412)). Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230) gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0221 YP_0222 YP0222 rplF rplF 227517 228050 + 50S ribosomal protein L6 similar to Yersinia pestis CO92 rplF and Yersinia pestis KIM rplF. Contains Ribosomal protein L6 (Interpro|IPR000702%2C (GO:0006412)). Contains Ribosomal protein L6%2C signature 1 (Interpro|IPR002358%2C (GO:0006412)) gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0222 YP_0223 YP0223 rplR rplR 228060 228413 + 50S ribosomal protein L18 similar to Yersinia pestis CO92 rplR and Yersinia pestis KIM rplR. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ribosomal protein L18 (Interpro|IPR004389%2C (GO:0006412)). Contains Ribosomal protein L18P/L5E (Interpro|IPR005484%2C (GO:0006412)) gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0223 YP_0224 YP0224 rpsE rpsE 228428 228931 + 30S ribosomal protein S5 similar to Yersinia pestis CO92 rpsE and Yersinia pestis KIM rpsE. Contains Ribosomal protein S5 (Interpro|IPR000851%2C (GO:0006412)). Contains Ribosomal protein S5%2C C-terminal domain (Interpro|IPR005324%2C (GO:0006412)). Contains Ribosomal protein S5%2C bacterial and organelle form (Interpro|IPR005712%2C (GO:0015935)) gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0224 YP_0225 YP0225 rpmD rpmD 228934 229113 + 50S ribosomal protein L30 similar to Yersinia pestis CO92 rpmD and Yersinia pestis KIM rpmD. Contains Ribosomal protein L30 (Interpro|IPR000517%2C (GO:0006412)). Contains Ribosomal protein L30%2C bacterial and organelle form (Interpro|IPR005996%2C (GO:0015934)) gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0225 YP_0226 YP0226 rplO rplO 229117 229551 + 50S ribosomal protein L15 similar to Yersinia pestis CO92 rplO and Yersinia pestis KIM rplO. Contains Ribosomal protein L15 (Interpro|IPR001196%2C (GO:0006412)). Contains Ribosomal protein L15%2C bacterial form (Interpro|IPR005749%2C (GO:0015934)) gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0226 YP_0227 YP0227 secY secY 229559 230890 + preprotein translocase SecY subunit similar to Yersinia pestis CO92 secY and Yersinia pestis KIM prlA. Contains C-5 cytosine-specific DNA methylase (Interpro|IPR001525%2C (GO:0006306)). Contains SecY protein (Interpro|IPR002208%2C (GO:0009306)%2C (GO:0016020)) gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0227 YP_0228 YP0228 rpmJ1 rpmJ1 230924 231040 + 50S ribosomal protein L36 similar to Yersinia pestis CO92 YPO0230. Contains Ribosomal protein L36 (Interpro|IPR000473%2C (GO:0006412)) gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0228 YP_0229 YP0229 rpsM rpsM 231188 231544 + 30S ribosomal protein S13 similar to Yersinia pestis CO92 rpsM and Yersinia pestis KIM rpsM. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ribosomal protein S13 (Interpro|IPR001892%2C (GO:0006412)) gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0229 YP_0230 YP0230 rpsK rpsK 231561 231950 + 30S ribosomal protein S11 similar to Yersinia pestis CO92 rpsK and Yersinia pestis KIM rpsK. Contains Ribosomal protein S11 (Interpro|IPR001971%2C (GO:0006412)) gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0230 YP_0231 YP0231 rpsD rpsD 231981 232601 + 30S ribosomal protein S4 similar to Yersinia pestis CO92 rpsD and Yersinia pestis KIM rpsD. Contains Ribosomal protein S4 (Interpro|IPR001912%2C (GO:0006412)). Contains RNA-binding S4 (Interpro|IPR002942%2C (GO:0003723)). Contains Ribosomal protein S4%2C bacterial and organelle form (Interpro|IPR005709%2C (GO:0015935)) gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0231 YP_0232 YP0232 rpoA rpoA 232627 233616 + DNA-directed RNA polymerase alpha chain similar to Yersinia pestis CO92 rpoA and Yersinia pestis KIM rpoA. Contains RNA polymerase%2C alpha chain%2C bacterial and organelle (Interpro|IPR001700%2C (GO:0006350)) gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0232 YP_0233 YP0233 rplQ rplQ 233657 234046 + 50S ribosomal protein L17 similar to Yersinia pestis CO92 rplQ and Yersinia pestis KIM rplQ. Contains Ribosomal protein L17 (Interpro|IPR000456%2C (GO:0006412)) gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0233 YP_0234 YP0234 soxR1 soxR1 234484 234918 + MerR-family transcriptional regulator similar to Yersinia pestis CO92 YPO0236 and Yersinia pestis KIM y4017. Contains Bacterial regulatory protein%2C MerR family (Interpro|IPR000551%2C (GO:0006355)) gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0234 YP_0235 YP0235 YP_0235 235006 235206 + hypothetical protein similar to Yersinia pestis CO92 YPO0237 and Yersinia pestis KIM y4018. Contains Domain of unknown function (Interpro|IPR005589) gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0235 YP_0236 YP0236 mscL mscL 235316 235738 - mechanosensitive ion channel similar to Yersinia pestis CO92 mscL and Yersinia pestis KIM mscL. Contains Large-conductance mechanosensitive channel (Interpro|IPR001185%2C (GO:0016020)) gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0236 YP_0237 YP0237 trkA trkA 235868 237244 - trk system potassium uptake protein similar to Yersinia pestis CO92 trkA and Yersinia pestis KIM trkA. Contains NAD binding site (Interpro|IPR000205). Contains TrkA-N (Interpro|IPR003148%2C (GO:0006813)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)). Contains TrkA-C (Interpro|IPR006037%2C (GO:0006813)%2C (GO:0008324)) gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0237 YP_0238 YP0238 sun sun 237300 238607 - tRNA and rRNA cytosine-C5-methylases similar to Yersinia pestis CO92 YPO0240 and Yersinia pestis KIM sun. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Bacterial Sun/eukaryotic nucleolar Nop1/Nop2 (Interpro|IPR001678). Contains Sun protein (Interpro|IPR004573). Contains Antitermination protein NusB (Interpro|IPR006027%2C (GO:0006355)). Contains NusB domain (Interpro|IPR006174) gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0238 YP_0239 YP0239 fmt fmt 238683 239630 - methionyl-tRNA formyltransferase similar to Yersinia pestis CO92 fmt and Yersinia pestis KIM fmt. Contains Formyl transferase%2C N-terminal (Interpro|IPR002376%2C (GO:0009058)%2C (GO:0016742)). Contains Formyl transferase%2C C-terminal (Interpro|IPR005793%2C (GO:0009058)%2C (GO:0016742)). Contains Methionyl-tRNA formyltransferase (Interpro|IPR005794%2C (GO:0006412)) gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0239 YP_0240 YP0240 def def 239655 240167 - polypeptide deformylase similar to Yersinia pestis CO92 def and Yersinia pestis KIM def. Contains Formylmethionine deformylase (Interpro|IPR000181%2C (GO:0006412)%2C (GO:0008463)) gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0240 YP_0241 YP0241 smf smf 240302 241423 + putative Rossmann fold nucleotide-binding protein involved in DNA uptake similar to Yersinia pestis CO92 YPO0243 and Yersinia pestis KIM smf1. Contains SMF protein (Interpro|IPR003488%2C (GO:0009294)) gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0241 YP_0242 YP0242 YP_0242 241395 241868 + hypothetical protein similar to Yersinia pestis KIM smg gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0242 YP_0243 YP0243 topA1 topA1 241888 242448 + putative DNA topoisomerase similar to Yersinia pestis KIM y4026. Contains DNA topoisomerase I (Interpro|IPR000380%2C (GO:0006268)) gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0243 YP_0244 YP0244 sUA5A sUA5A 242450 243022 + Putative translation factor (SUA5) similar to Yersinia pestis CO92 YPO0245a and similar to Yersinia pestis KIM y4027 (residues 1 to 182 of 182 are similar to residues 13 to 194 of 194 from Yersinia pestis KIM y4027). Contains Sua5/YciO/YrdC/YwlC protein family (Interpro|IPR004388%2C (GO:0005554)). Contains SUA5/yciO/yrdC N-terminal (Interpro|IPR006070) gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0244 YP_0245 YP0245 aroE1 aroE1 243031 243852 + shikimate 5-dehydrogenase similar to Yersinia pestis CO92 aroE and Yersinia pestis KIM aroE. Contains Shikimate/quinate 5-dehydrogenase (Interpro|IPR006151%2C (GO:0016089)). Contains Shikimate 5-dehydrogenase (Interpro|IPR006152%2C (GO:0016089)) gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0245 YP_0246 YP0246 paaY paaY 243907 244449 - putative transferase similar to Yersinia pestis KIM y4029. Contains Bacterial transferase hexapeptide repeat (Interpro|IPR001451) gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0246 YP_0247 YP0247 YP_0247 250666 250932 + putative transposase similar to Yersinia pestis KIM y0503. Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains Transposase%2C IS3/IS911family (Interpro|IPR002514) gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0247 YP_0248 YP0248 tra5B tra5B 250956 251765 + putative transposase similar to Yersinia pestis KIM y0504. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0248 YP_0249 YP0249 dnaC_3 dnaC_3 252429 253211 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0249 YP_0250 YP0250 YP_0250 253208 254230 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0250 YP_0251 YP0251 tnp_4 tnp_4 254322 254780 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp (IS1541) and Yersinia pestis KIM y3987. gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0251 YP_0252 YP0252 YP_0252 254970 255176 - hypothetical protein similar to Yersinia pestis CO92 YPO3432 and Yersinia pestis KIM y0755. Contains Domain of unknown function DUF329 (Interpro|IPR005584) gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0252 YP_0253 YP0253 YP_0253 255362 256114 - hypothetical protein similar to Yersinia pestis CO92 YPO3431 and Yersinia pestis KIM y0756 gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0253 YP_0254 YP0254 coaE coaE 256111 256731 - Dephospho-CoA kinase similar to Yersinia pestis CO92 YPO3430 and Yersinia pestis KIM y0757. Contains Shikimate kinase (Interpro|IPR000623%2C (GO:0008652)). Contains Uridine kinase (Interpro|IPR000764%2C (GO:0006224)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Dephospho-CoA kinase (Interpro|IPR001977%2C (GO:0005524)) gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0254 YP_0256 YP0256 guaC guaC 257026 258069 + GMP reductase similar to Yersinia pestis CO92 guaC. Contains IMP dehydrogenase/GMP reductase (Interpro|IPR001093%2C (GO:0003824)). Contains FMN/related compound-binding core (Interpro|IPR003009). Contains Guanosine monophosphate reductase 1 (Interpro|IPR005993%2C (GO:0009117)) gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0256 YP_0257 YP0257 hofC hofC 258512 259711 - putative type II secretion system protein similar to Yersinia pestis CO92 hofC and Yersinia pestis KIM hofC. Contains Bacterial type II secretion system protein (Interpro|IPR001992%2C (GO:0016020)). Contains Bacterial general secretion pathway protein F (Interpro|IPR003004%2C (GO:0015628)) gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0257 YP_0258 YP0258 hofB hofB 259708 261264 - putative integral membrane protein similar to Yersinia pestis KIM hofB. Contains Bacterial type II secretion system protein E (Interpro|IPR001482%2C (GO:0006810)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0258 YP_0259 YP0259 ppdD ppdD 261239 261703 - putative prepilin peptidase dependent protein D precursor similar to Yersinia pestis CO92 ppdD and Yersinia pestis KIM ppdD. Contains Fimbrial protein pilin (Interpro|IPR001082%2C (GO:0009289)). Contains Prokaryotic N-terminal methylation site (Interpro|IPR001120). Contains Bacterial general secretion pathway protein H (Interpro|IPR002416%2C (GO:0015628)) gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0259 YP_0260 YP0260 nadC nadC 261906 262853 - quinolinate phosphoribosyltransferase similar to Yersinia pestis KIM nadC. Contains Quinolinate phosphoribosyl transferase (Interpro|IPR002638%2C (GO:0009435)). Contains Nicotinate-nucleotide pyrophosphorylase (Interpro|IPR004393%2C (GO:0019363)) gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0260 YP_0261 YP0261 ampD1 ampD1 262927 263478 + putative signaling protein in beta-lactamase regulation similar to Yersinia pestis CO92 ampD and Yersinia pestis KIM ampD. Contains N-acetylmuramoyl-L-alanine amidase%2C family 2 (Interpro|IPR002502%2C (GO:0009253)) gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0261 YP_0262 YP0262 ampE ampE 263751 264605 + putative membrane-bound sensory transducer in beta-lactamase regulation similar to Yersinia pestis CO92 ampE and Yersinia pestis KIM ampE gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0262 YP_0263 YP0263 aroP1 aroP1 265038 266438 - aromatic amino acid transport protein similar to Yersinia pestis CO92 aroP and Yersinia pestis KIM aroP. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)). Contains Hemopexin repeat (Interpro|IPR000585). Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0263 YP_0264 YP0264 pdhR pdhR 267226 268062 + pyruvate dehydrogenase complex repressor similar to Yersinia pestis CO92 pdhR and Yersinia pestis KIM pdhR. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C MarR family (Interpro|IPR000835%2C (GO:0006355)). Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0264 YP_0265 YP0265 aceE aceE 268258 270921 + pyruvate dehydrogenase E1 component similar to Yersinia pestis CO92 aceE and Yersinia pestis KIM aceE. Contains Biotin/lipoyl attachment (Interpro|IPR000089). Contains Formyl/methionyl peptide receptor (Interpro|IPR000826%2C (GO:0016021)). Contains Catalytic domain of components of various dehydrogenase complexes (Interpro|IPR001078%2C (GO:0008152)%2C (GO:0008415)). Contains 2-oxo acid dehydrogenase%2C acyltransferase component%2C lipoyl-binding (Interpro|IPR003016). Contains E3 binding domain (Interpro|IPR004167%2C (GO:0008415)). Contains 2-oxo-acid dehydrogenase E1 component homodimeric type (Interpro|IPR004660%2C (GO:0016491)). Contains Transketolase%2C N terminal (Interpro|IPR005474). Contains Dihydrolipoamide acetyltransferase (Interpro|IPR006256) gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0265 YP_0266 YP0266 aceF aceF 270935 272464 + dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex similar to Yersinia pestis CO92 aceF and Yersinia pestis KIM aceF. Contains Biotin/lipoyl attachment (Interpro|IPR000089). Contains Formyl/methionyl peptide receptor (Interpro|IPR000826%2C (GO:0016021)). Contains Catalytic domain of components of various dehydrogenase complexes (Interpro|IPR001078%2C (GO:0008152)%2C (GO:0008415)). Contains 2-oxo acid dehydrogenase%2C acyltransferase component%2C lipoyl-binding (Interpro|IPR003016). Contains E3 binding domain (Interpro|IPR004167%2C (GO:0008415)). Contains 2-oxo-acid dehydrogenase E1 component homodimeric type (Interpro|IPR004660%2C (GO:0016491)). Contains Transketolase%2C N terminal (Interpro|IPR005474). Contains Dihydrolipoamide acetyltransferase (Interpro|IPR006256) gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0266 YP_0267 YP0267 YP_0267 272482 272643 + hypothetical protein no significant database match found gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0267 YP_0268 YP0268 lpdA lpdA 272767 274194 + dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex similar to Yersinia pestis CO92 lpdA and Yersinia pestis KIM lpdA. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Mercuric reductase (Interpro|IPR000815%2C (GO:0005505)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Pyridine nucleotide-disulphide oxidoreductase dimerisation domain (Interpro|IPR004099%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006118)%2C (GO:0016491)). Contains Dihydrolipoamide dehydrogenase (Interpro|IPR006258) gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0268 YP_0269 YP0269 tnp_5 tnp_5 274386 274895 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase IS200-like (Interpro|IPR002686). gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0269 YP_0270 YP0270 acnB acnB 275465 278062 + aconitate hydratase 2 similar to Yersinia pestis CO92 acnB and Yersinia pestis KIM acnB. Contains Aconitate hydratase%2C N-terminal (Interpro|IPR001030). Contains Aconitate hydratase 2 (Interpro|IPR004406%2C (GO:0006099)) gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0270 YP_0271 YP0271 YP_0271 278361 278720 + hypothetical protein similar to Yersinia pestis CO92 YPO3414 gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0271 YP_0272 YP0272 rhaT1 rhaT1 278831 279739 - putative membrane protein similar to Yersinia pestis CO92 YPO3413 and Yersinia pestis KIM y0773. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0272 YP_0273 YP0273 speD speD 280177 280971 - S-adenosylmethionine decarboxylase proenzyme similar to Yersinia pestis CO92 speD and Yersinia pestis KIM speD. gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0273 YP_0274 YP0274 speE speE 281049 282023 - spermidine synthase similar to Yersinia pestis CO92 speE and Yersinia pestis KIM speE. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Spermine synthase (Interpro|IPR001045%2C (GO:0003824)) gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0274 YP_0275 YP0275 YP_0275 282056 282403 - putative exported protein similar to Yersinia pestis CO92 YPO3410 and Yersinia pestis KIM y0776 gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0275 YP_0276 YP0276 sufI1 sufI1 282546 284321 + putative exported protein similar to Yersinia pestis CO92 YPO3409 and Yersinia pestis KIM y0777. Contains Multicopper oxidase%2C type 1 (Interpro|IPR001117%2C (GO:0005507)). Contains Multicopper oxidase%2C copper-binding (Interpro|IPR002355%2C (GO:0005507)). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311) gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0276 YP_0277 YP0277 hpt hpt 284532 285077 + hypoxanthine phosphoribosyltransferase similar to Yersinia pestis KIM hpt. Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Purine/pyrimidine phosphoribosyl transferase (Interpro|IPR002375). Contains Hypoxanthine phosphoribosyl transferase (Interpro|IPR005904%2C (GO:0006166)) gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0277 YP_0278 YP0278 cynT1 cynT1 285231 286106 - putative carbonic anhdrase similar to Yersinia pestis KIM y0779. Contains Carbonic anhydrase%2C prokaryotic (Interpro|IPR001765%2C (GO:0015976)) gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0278 YP_0279 YP0279 ccmA1 ccmA1 286129 287055 + putative ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO3406 and Yersinia pestis KIM y0780. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0279 YP_0280 YP0280 YP_0280 287052 287822 + putative ABC transporter%2C integral membrane protein similar to Yersinia pestis CO92 YPO3405 and Yersinia pestis KIM y0781. Contains ABC transporter%2C family 2 (Interpro|IPR000412%2C (GO:0016020)) gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0280 YP_0281 YP0281 YP_0281 288029 289343 + similar to Yersinia pestis CO92 YPO3404 (residue 41 to 431%2C and similar to gi|16763569|ref|NP_459184.1| putative xylanase/chitin deacetylase [Salmonella typhimurium LT2] (409 aa). The sequence has been checked and is believed to be correct. Contains Polysaccharide deacetylase (Interpro|IPR002509%2C (GO:0005975)%2C (GO:0016810)) pseudogene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0281 YP_0282 YP0282 panD panD 289492 289872 - aspartate 1-decarboxylase precursor similar to Yersinia pestis CO92 panD and Yersinia pestis KIM panD. Contains Aspartate decarboxylase (Interpro|IPR003190%2C (GO:0006523)) gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0282 YP_0283 YP0283 panC panC 290283 291137 - pantoate--beta-alanine ligase similar to Yersinia pestis CO92 panC and Yersinia pestis KIM panC. Contains Pantoate-beta-alanine ligase (Interpro|IPR003721%2C (GO:0015940)) gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0283 YP_0284 YP0284 panB panB 291225 292022 - 3-methyl-2-oxobutanoate hydroxymethyltransferase similar to Yersinia pestis CO92 panB and Yersinia pestis KIM panB. Contains Ketopantoate hydroxymethyltransferase (Interpro|IPR003700%2C (GO:0015940)) gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0284 YP_0285 YP0285 folK folK 292291 292770 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase similar to Yersinia pestis CO92 folK and Yersinia pestis KIM folK. Contains 7%2C8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C HPPK (Interpro|IPR000550%2C (GO:0009396)) gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0285 YP_0286 YP0286 pcnB pcnB 292778 294199 - poly(A) polymerase similar to Yersinia pestis CO92 pcnB and Yersinia pestis KIM pcnB. Contains Polynucleotide adenylyltransferase (Interpro|IPR002646%2C (GO:0006396)) gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0286 YP_0287 YP0287 glnS1 glnS1 294342 295496 - putative glutamyl-tRNA synthetase similar to Yersinia pestis CO92 YPO3398 and Yersinia pestis KIM y0789. Contains Glutamyl-tRNA synthetase%2C class Ic (Interpro|IPR000924%2C (GO:0006424)) gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0287 YP_0288 YP0288 dksA1 dksA1 295587 296135 - DnaK suppressor protein similar to Yersinia pestis CO92 dksA and Yersinia pestis KIM dksA. Contains Zn-finger%2C prokaryotic DksA/TraR C4 type (Interpro|IPR000962) gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0288 YP_0289 YP0289 sfsA sfsA 296212 297087 - sugar fermentation stimulation protein similar to Yersinia pestis CO92 sfsA and Yersinia pestis KIM sfsA. Contains Sugar fermentation stimulation protein (Interpro|IPR005224) gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0289 YP_0290 YP0290 ligT ligT 297062 297637 - putative 2'-5' RNA ligase similar to Yersinia pestis CO92 ligT and Yersinia pestis KIM y0793. Contains 2'_5' RNA ligase (Interpro|IPR004175%2C (GO:0016070)) gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0290 YP_0291 YP0291 hrpB hrpB 297678 300239 + helicase%2C ATP-dependent similar to Yersinia pestis KIM hrpB. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Mitochondrial substrate carrier (Interpro|IPR001993%2C (GO:0006810)) gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0291 YP_0292 YP0292 mrcB mrcB 300327 302822 + penicillin-binding protein 1B similar to Yersinia pestis CO92 mrcB and Yersinia pestis KIM mrcB. Contains Glycosyl transferase%2C family 51 (Interpro|IPR001264%2C (GO:0009274)). Contains Penicillin-binding protein%2C transpeptidase domain (Interpro|IPR001460%2C (GO:0008233)%2C (GO:0008658)%2C (GO:0009273)) gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0292 YP_0293 YP0293 fhuC fhuC 303144 303938 + ferrichrome transport ATP-binding protein FhuC similar to Yersinia pestis CO92 fhuC and Yersinia pestis KIM fhuC. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0293 YP_0294 YP0294 fhuD fhuD 304115 305026 + ferrichrome-binding periplasmic protein precursor similar to Yersinia pestis CO92 fhuD and similar to Yersinia pestis KIM fhuD (residues 1 to 292 of 292 are similar to residues 71 to 362 of 362 from Yersinia pestis KIM fhuD). Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0294 YP_0295 YP0295 fhuB fhuB 305023 307020 + ferrichrome transport system permease protein FhuB similar to Yersinia pestis CO92 fhuB. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0295 YP_0296 YP0296 hemL hemL 307394 308674 - glutamate-1-semialdehyde 2%2C1-aminomutase similar to Yersinia pestis CO92 hemL and Yersinia pestis KIM hemL. Contains Glutamate-1-semialdehyde-2%2C1-aminomutase (Interpro|IPR004639%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006779)%2C (GO:0042286)). Contains Aminotransferase class-III (Interpro|IPR005814%2C (GO:0008483)) gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0296 YP_0297 YP0297 eriC1 eriC1 309055 310491 + putative chloride channel protein similar to Yersinia pestis CO92 YPO3388 and Yersinia pestis KIM y0800. Contains Eukaryotic thiol (cysteine) protease (Interpro|IPR000169%2C (GO:0006508)). Contains Cl- channel%2C voltage gated (Interpro|IPR001807%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0297 YP_0298 YP0298 iscA1 iscA1 310612 310971 + iron-sulfur cluster insertion protein ErpA similar to Yersinia pestis CO92 YPO3387 and Yersinia pestis KIM y0801. Contains Protein of unknown function%2C HesB/YadR/YfhF (Interpro|IPR000361%2C (GO:0005554)) gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0298 YP_0299 YP0299 YP_0299 311256 311918 - putative membrane protein similar to Yersinia pestis CO92 YPO3386 and Yersinia pestis KIM y0803. Contains Domain of unknown function UPF0126 (Interpro|IPR005115) gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0299 YP_0300 YP0300 fecB1 fecB1 311870 312712 - putative priplasmic metal binding protein similar to Yersinia pestis CO92 YPO3385 and Yersinia pestis KIM y0804. Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0300 YP_0301 YP0301 mtn mtn 312712 313413 - MTA/SAH nucleosidase similar to Yersinia pestis CO92 mtn and Yersinia pestis KIM pfs. Contains Purine and other phosphorylases%2C family 1 (Interpro|IPR000845%2C (GO:0009116)). Contains Flavin-containing monooxygenase FMO (Interpro|IPR000960%2C (GO:0006118)) gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0301 YP_0302 YP0302 dgt dgt 313707 315227 + deoxyguanosinetriphosphate triphosphohydrolase similar to Yersinia pestis CO92 dgt and Yersinia pestis KIM dgt. Contains Metal dependent phosphohydrolase%2C HD region (Interpro|IPR003607%2C (GO:0003824)). Contains Deoxyguanosinetriphosphate triphosphohydrolase (Interpro|IPR006261). Contains Metal-dependent phosphohydrolase%2C HD region (Interpro|IPR006674) gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0302 YP_0303 YP0303 gsrA gsrA 315425 316870 + global stress requirement protein GsrA similar to Yersinia pestis CO92 gsrA and Yersinia pestis KIM htrA. Contains Serine proteases%2C V8 family (Interpro|IPR000126%2C (GO:0006508)%2C (GO:0008236)). Contains Serine protease%2C trypsin family (Interpro|IPR001254%2C (GO:0006508)). Contains PDZ/DHR/GLGF domain (Interpro|IPR001478%2C (GO:0007242)). Contains HtrA/DegQ protease (Interpro|IPR001940%2C (GO:0006508)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0303 YP_0304 YP0304 barA barA 317029 319794 - two-component regulatory protein similar to Yersinia pestis CO92 barA and Yersinia pestis KIM barA. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Hpt domain (Interpro|IPR002570%2C (GO:0007165)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0304 YP_0305 YP0305 YP_0305 319905 320087 + hypothetical protein similar to Yersinia pestis KIM y0809. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230) gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0305 YP_0306 YP0306 relA relA 320238 322472 + GTP pyrophosphokinase similar to Yersinia pestis CO92 relA and Yersinia pestis KIM relA. Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains TGS domain (Interpro|IPR004095). Contains RelA/SpoT family protein (Interpro|IPR004811%2C (GO:0015969)) gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0306 YP_0308 YP0308 mazG mazG 322674 323516 + putative pyrophosphatase similar to Yersinia pestis CO92 YPO3378 and Yersinia pestis KIM mazG. Contains MazG family protein (Interpro|IPR004518) gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0308 YP_0309 YP0309 pyrG pyrG 323728 325365 + CTP synthase similar to Yersinia pestis CO92 pyrG and Yersinia pestis KIM pyrG. Contains Glutamine amidotransferase class-I (Interpro|IPR000991%2C (GO:0003824)). Contains Glutamate 5-kinase (Interpro|IPR001057%2C (GO:0006561)). Contains CTP synthase (Interpro|IPR004468%2C (GO:0006221)) gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0309 YP_0310 YP0310 eno eno 325446 326741 + enolase similar to Yersinia pestis CO92 eno and Yersinia pestis KIM eno. Contains Enolase (Interpro|IPR000941%2C Cellular Component: phosphopyruvate hydratase complex (GO:0000015)%2C (GO:0006096)) gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0310 YP_0311 YP0311 sodC sodC 327113 327718 + superoxide dismutase [Cu-Zn] precursor similar to Yersinia pestis CO92 sodC. Contains Copper/Zinc superoxide dismutase (Interpro|IPR001424%2C (GO:0006801)) gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0311 YP_0312 YP0312 nrdG1 nrdG1 327822 328493 + Organic radical activating enzymes similar to Yersinia pestis CO92 YPO3374 and Yersinia pestis KIM y0816 gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0312 YP_0313 YP0313 YP_0313 328727 329092 - sulfite reductase%2C alpha subunit similar to Yersinia pestis KIM y0817. Contains 6-pyruvoyl tetrahydropterin synthase and hypothetical protein (Interpro|IPR007115) gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0313 YP_0314 YP0314 cysJ cysJ 329437 331317 + sulfite reductase [NADPH] flavoprotein alpha-component similar to Yersinia pestis CO92 cysJ and Yersinia pestis KIM cysJ. Contains Flavodoxin-like domain (Interpro|IPR001094%2C (GO:0006118)%2C (GO:0008246)). Contains Flavodoxin (Interpro|IPR001226%2C (GO:0006118)%2C (GO:0009457)). Contains Oxidoreductase FAD/NAD(P)-binding (Interpro|IPR001433%2C (GO:0006118)%2C (GO:0008246)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-binding (Interpro|IPR003097%2C (GO:0006118)%2C (GO:0016491)) gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0314 YP_0315 YP0315 cysI cysI 331317 333047 + sulfite reductase [NADPH] hemoprotein beta-component similar to Yersinia pestis CO92 cysI and Yersinia pestis KIM cysI. Contains Nitrite/sulfite reductase ferredoxin-like half domain (Interpro|IPR005117). Contains Nitrite and sulfite reductase iron-sulfur/siroheme-binding site (Interpro|IPR006066%2C (GO:0006118)). Contains Nitrite and sulphite reductase 4Fe-4S domain (Interpro|IPR006067%2C (GO:0006118)) gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0315 YP_0316 YP0316 cysH cysH 333044 333770 + similar to gi|16766252|ref|NP_461867.1| (NC_003197) 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase [Salmonella typhimurium LT2]. Contains a frameshift around codon 154. The sequence has been checked and is believed to be correct. pseudogene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0316 YP_0317 YP0317 YP_0317 334013 334525 - hypothetical protein similar to Yersinia pestis KIM y0821. Contains Protein of unknown function UPF0150 (Interpro|IPR005357%2C (GO:0005554)) gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0317 YP_0318 YP0318 YP_0318 334595 334795 - hypothetical protein no significant database match found gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0318 YP_0319 YP0319 YP_0319 334819 335085 + putative membrane protein similar to Yersinia pestis CO92 YPO3368 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0319 YP_0320 YP0320 cysG2 cysG2 335386 336803 + similar to Yersinia pestis cysG. Note there is a frameshift following codon 142. The sequence has been checked and is believed to be correct. Contains Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (Interpro|IPR000878%2C (GO:0008152)%2C (GO:0008168)) . Contains Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (Interpro|IPR000878%2C (GO:0008152)%2C (GO:0008168)). Contains Uroporphiryn-III C-methyltransferase (Interpro|IPR003043%2C (GO:0006779)%2C (GO:0008168)). Contains Uroporphyrin-III C-methyltransferase%2C C-terminal (Interpro|IPR006366). Contains Siroheme synthase%2C N-terminal (Interpro|IPR006367). Contains Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (Interpro|IPR000878%2C (GO:0008152)%2C (GO:0008168)). Contains Uroporphiryn-III C-methyltransferase (Interpro|IPR003043) pseudogene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0320 YP_0321 YP0321 cysD cysD 336814 337722 + sulfate adenylyltransferase subunit 2 similar to Yersinia pestis CO92 cysD and Yersinia pestis KIM cysD. Contains Phosphoadenosine phosphosulfate reductase (Interpro|IPR002500%2C (GO:0008152)%2C (GO:0016740)) gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0321 YP_0322 YP0322 cysN cysN 337734 339251 + ATP-sulfurylase%2C subunit 1 similar to Yersinia pestis KIM cysN. Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains Heat shock protein Hsp70 (Interpro|IPR001023). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Small GTP-binding protein domain (Interpro|IPR005225) gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0322 YP_0323 YP0323 cysC cysC 339190 339894 + adenosine 5'-phosphosulfate kinase similar to Yersinia pestis KIM cysC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Adenylylsulfate kinase (Interpro|IPR002891%2C (GO:0016301)%2C (GO:0016772)) gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0323 YP_0324 YP0324 YP_0324 340067 340402 + putative membrane protein similar to Yersinia pestis CO92 YPO3363 and Yersinia pestis KIM y0826. gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0324 YP_0325 YP0325 YP_0325 340716 341036 + Septum formation initiator similar to Yersinia pestis CO92 YPO3362 and Yersinia pestis KIM y0827. Contains Septum formation initiator (Interpro|IPR007060) gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0325 YP_0326 YP0326 ispD ispD 341040 341765 + 4-diphosphocytidyl-2C-methyl-D-erythritol synthase similar to Yersinia pestis CO92 ispD and Yersinia pestis KIM y0828. Contains 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (Interpro|IPR001228%2C (GO:0008299)%2C (GO:0008699)) gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0326 YP_0327 YP0327 ispF ispF 341895 342392 + 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase similar to Yersinia pestis KIM y0829. Contains YgbB (Interpro|IPR003526%2C (GO:0016114)) gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0327 YP_0328 YP0328 YP_0328 342403 343452 + hypothetical protein similar to Yersinia pestis CO92 YPO3359 and Yersinia pestis KIM y0830. Contains Protein of unknown function UPF0024 (Interpro|IPR001656%2C (GO:0005554)) gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0328 YP_0329 YP0329 surE surE 343430 344194 + stationary-phase survival protein similar to Yersinia pestis CO92 surE and Yersinia pestis KIM surE. Contains Survival protein SurE (Interpro|IPR002828) gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0329 YP_0330 YP0330 pcm pcm 344188 344814 + protein-L-isoaspartate O-methyltransferase similar to Yersinia pestis CO92 pcm and Yersinia pestis KIM pcm. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Protein-L-isoaspartate(D-aspartate) O-methyltransferase (Interpro|IPR000682%2C (GO:0006464)) gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0330 YP_0331 YP0331 nlpD2 nlpD2 344918 345919 + lipoprotein similar to Yersinia pestis CO92 nlpD and Yersinia pestis KIM nlpD. Contains Peptidoglycan-binding LysM (Interpro|IPR002482%2C (GO:0016998)). Contains Peptidase M23/M37 (Interpro|IPR002886%2C (GO:0006508)) gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0331 YP_0332 YP0332 rpoS rpoS 345974 346972 + RNA polymerase sigma factor RpoS similar to Yersinia pestis CO92 rpoS and Yersinia pestis KIM rpoS. Contains Sigma-70 factor family (Interpro|IPR000943%2C (GO:0016987)) gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0332 YP_0333 YP0333 mutS mutS 347332 349887 - DNA mismatch repair protein MutS similar to Yersinia pestis CO92 mutS and Yersinia pestis KIM mutS. Contains DNA mismatch repair protein MutS%2C C-terminal (Interpro|IPR000432%2C (GO:0006298)). Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains DNA mismatch repair protein MutS%2C N-terminal (Interpro|IPR002863%2C (GO:0006298)). Contains MutS 1 protein (Interpro|IPR005748%2C (GO:0045005)) gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0333 YP_0334 YP0334 rpiB1 rpiB1 350662 351117 - ribose 5-phosphate isomerase B similar to Yersinia pestis CO92 rpiB and Yersinia pestis KIM rpiB. Contains Ribose/galactose isomerase (Interpro|IPR003500%2C (GO:0005975)) gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0334 YP_0335 YP0335 tdh2 tdh2 351567 352715 + putative Zinc-binding dehydrogenase similar to Yersinia pestis CO92 YPO3352 and Yersinia pestis KIM y0838. Contains NAD binding site (Interpro|IPR000205). Contains Zinc-containing alcohol dehydrogenase superfamily (Interpro|IPR002085%2C (GO:0008270)). Contains Zinc-containing alcohol dehydrogenase (Interpro|IPR002328%2C (GO:0008270)) gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0335 YP_0336 YP0336 fabG1 fabG1 352779 353549 + putative dehydrogenase similar to Yersinia pestis CO92 YPO3351 and Yersinia pestis KIM y0839. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0336 YP_0337 YP0337 dAK1_1 dAK1_1 353549 354637 + putative dihydroxyacetone kinase similar to Yersinia pestis CO92 dhaK and Yersinia pestis KIM y0840. Contains Dak kinase domain (Interpro|IPR004006%2C (GO:0006071)) gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0337 YP_0338 YP0338 dAK1_2 dAK1_2 354644 355318 + Dihydroxyacetone kinase similar to Yersinia pestis CO92 YPO3349 and Yersinia pestis KIM y0842. Contains Dak phosphatase domain (Interpro|IPR004007%2C (GO:0006071)) gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0338 YP_0339 YP0339 deoR5 deoR5 355439 356398 - transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3348 and similar Yersinia pestis KIM y0843 . Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)) gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0339 YP_0340 YP0340 arsB arsB 356965 358254 - arsenical pump membrane protein similar to Yersinia pestis CO92 arsB and Yersinia pestis KIM arsB. Contains Arsenical pump membrane protein (Interpro|IPR000802%2C (GO:0016021)) gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0340 YP_0341 YP0341 arsR1 arsR1 358339 358680 - arsenical resistance operon repressor similar to Yersinia pestis CO92 arsR and Yersinia pestis KIM arsR. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Bacterial regulatory protein%2C ArsR family (Interpro|IPR001845%2C (GO:0006355)) gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0341 YP_0342 YP0342 YP_0342 358927 359205 - hypothetical protein similar to Yersinia pestis CO92 YPO3345 gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0342 YP_0343 YP0343 YP_0343 359401 359607 - hypothetical protein similar to Yersinia pestis CO92 YPO3344 and Yersinia pestis KIM y0846. gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0343 YP_0344 YP0344 artI1 artI1 360028 360798 - putative extracellular solute-binding protein similar to Yersinia pestis CO92 YPO3343 and Yersinia pestis KIM y0847. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)) gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0344 YP_0345 YP0345 mauG mauG 360863 362242 - putative cytochrome C peroxidase similar to Yersinia pestis CO92 YPO3342 and Yersinia pestis KIM y0848. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Di-haem cytochrome c peroxidase (Interpro|IPR004852%2C (GO:0006118)) gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0345 YP_0346 YP0346 YP_0346 362479 362784 - hypothetical protein similar to Yersinia pestis KIM y0849 gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0346 YP_0347 YP0347 cirA2 cirA2 362804 364999 + putative outer membrane receptor similar to Yersinia pestis KIM y0850. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0347 YP_0348 YP0348 YP_0348 365432 366619 + hypothetical protein similar to Yersinia pestis CO92 YPO3339 and Yersinia pestis KIM y0851 gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0348 YP_0350 YP0350 map map 367013 367798 - methionine aminopeptidase similar to Yersinia pestis CO92 map and Yersinia pestis KIM map. Contains Metallopeptidase family M24 (Interpro|IPR000994%2C (GO:0006508)%2C (GO:0008235)). Contains Methionine aminopeptidase (Interpro|IPR001714%2C (GO:0006508)). Contains Methionine aminopeptidase%2C subfamily 1 (Interpro|IPR002467%2C (GO:0006508)) gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0350 YP_0351 YP0351 YP_0351 367795 368100 - hypothetical protein similar to Yersinia pestis CO92 YPO3336 and Yersinia pestis KIM y0853. gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0351 YP_0352 YP0352 fumA fumA 368229 369872 - fumarate hydratase%2C class I similar to Yersinia pestis CO92 fumA and Yersinia pestis KIM fumA. Contains Fumarate lyase (Interpro|IPR000362%2C (GO:0003824)). Contains Fe-S type hydro-lyases tartrate/fumarate alpha region (Interpro|IPR004646%2C (GO:0016829)). Contains Fe-S type hydro-lyases tartrate/fumarate beta region (Interpro|IPR004647%2C (GO:0016829)) gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0352 YP_0353 YP0353 sgbK sgbK 370270 371766 - putative L-xylulose kinase similar to Yersinia pestis CO92 sgbK and Yersinia pestis KIM lyxK. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)) gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0353 YP_0354 YP0354 sgbU sgbU 371777 372658 - putative hexulose-6-phosphate isomerase similar to Yersinia pestis CO92 sgbU and Yersinia pestis KIM sgbU. Contains Putative hexulose-6-phosphate isomerase (Interpro|IPR004560%2C (GO:0005975)%2C (GO:0016861)) gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0354 YP_0355 YP0355 araH1 araH1 372864 373901 - putative sugar ABC transporter%2C permeaseprotein similar to Yersinia pestis CO92 YPO3332 and Yersinia pestis KIM y0857. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0355 YP_0356 YP0356 araH2 araH2 373914 374903 - putative sugar ABC transporter%2C permease protein similar to Yersinia pestis CO92 YPO3331 and Yersinia pestis KIM y0858. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0356 YP_0357 YP0357 mglA1 mglA1 374896 376410 - putative sugar ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO3330. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0357 YP_0358 YP0358 rbsB1 rbsB1 376559 377662 - putative sugar ABC transporter%2C periplasmic protein similar to Yersinia pestis CO92 YPO3328 and Yersinia pestis KIM y0861. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0358 YP_0359 YP0359 glpR2 glpR2 377724 378533 - putative deoR-family regulatory protein similar to Yersinia pestis CO92 YPO3327 and Yersinia pestis KIM y0862. Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0359 YP_0360 YP0360 araD1 araD1 379161 379931 + L-ribulose-5-phosphate 4-epimerase similar to Yersinia pestis KIM araD. Contains Class II aldolase/adducin%2C N-terminal (Interpro|IPR001303) gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0360 YP_0361 YP0361 dmsA1 dmsA1 380373 382844 + anaerobic dimethyl sulfoxide reductase subunit A similar to Yersinia pestis KIM dmsA. Contains Twin-arginine translocation pathway signal (Interpro|IPR006311). Contains Prokaryotic molybdopterin oxidoreductase (Interpro|IPR006655%2C (GO:0006118)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molydopterin dinucleotide binding domain (Interpro|IPR006657). Contains Molybdopterin oxidoreductase Fe4S4 domain (Interpro|IPR006963). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311). Contains Prokaryotic molybdopterin oxidoreductase (Interpro|IPR006655%2C (GO:0006118)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molydopterin dinucleotide binding domain (Interpro|IPR006657). Contains Molybdopterin oxidoreductase Fe4S4 domain (Interpro|IPR006963) gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0361 YP_0362 YP0362 dmsB1 dmsB1 382856 383473 + anaerobic dimethyl sulfoxide reductase chain B similar to Yersinia pestis CO92 dmsB and Yersinia pestis KIM dmsB. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 3Fe-4S ferredoxin (Interpro|IPR001080%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 3Fe-4S ferredoxin (Interpro|IPR001080%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)) gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0362 YP_0363 YP0363 dmsC1 dmsC1 383412 384335 + anaerobic dimethyl sulfoxide reductase subunit C similar to Yersinia pestis KIM dmsC. Contains Ribosomal protein S2 (Interpro|IPR001865%2C (GO:0006412)). Contains DMSO reductase anchor subunit (DmsC) (Interpro|IPR007059) gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0363 YP_0364 YP0364 torD1 torD1 384481 385191 + putative component of anaerobic dehydrogenases similar to Yersinia pestis CO92 YPO3322 and Yersinia pestis KIM y0867 gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0364 YP_0365 YP0365 cybB1 cybB1 385448 386011 - putative cytochrome B561 similar to Yersinia pestis CO92 cybB and Yersinia pestis KIM cybB. Contains Nickel-dependent hydrogenase b-type cytochrome subunit (Interpro|IPR000516%2C (GO:0016020)%2C (GO:0016491)) gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0365 YP_0366 YP0366 cybC cybC 386126 386509 - putative cytochrome B562 similar to Yersinia pestis CO92 cybC gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0366 YP_0367 YP0367 katG katG 386586 388841 - catalase similar to Yersinia pestis KIM katG. Contains Bacterial haem catalase/peroxidase (Interpro|IPR000763%2C (GO:0006979)). Contains Haem peroxidase (Interpro|IPR002016%2C (GO:0006804)). Contains Calcium-binding EF-hand (Interpro|IPR002048%2C (GO:0005509)). Contains Plant ascorbate peroxidase (Interpro|IPR002207%2C (GO:0006804))%3B hydroperoxidase HPI(I) gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0367 YP_0368 YP0368 rbsB2 rbsB2 389320 390276 + putative sugar ABC transporter%2C periplasmic protein similar to Yersinia pestis CO92 YPO3318 and similar to Yersinia pestis KIM y0871. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0368 YP_0369 YP0369 YP_0369 390369 390986 + putative lipoprotein similar to Yersinia pestis CO92 YPO3317 and Yersinia pestis KIM y0872 gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0369 YP_0370 YP0370 mglA2 mglA2 390986 392509 + putative sugar ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO3316 and Yersinia pestis KIM y0873. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0370 YP_0371 YP0371 araH3 araH3 392506 393651 + putative sugar ABC transporter%2C permease protein similar to Yersinia pestis CO92 YPO3315 and Yersinia pestis KIM rbsC. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0371 YP_0372 YP0372 tktA1 tktA1 393897 394727 + putative N-terminal region of transketolase similar to Yersinia pestis CO92 YPO3314. Contains Transketolase%2C N terminal (Interpro|IPR005474) gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0372 YP_0373 YP0373 tktA2 tktA2 394720 395664 + C-terminal region of transketolase similar to Yersinia pestis CO92 YPO3313. Contains Transketolase%2C central region (Interpro|IPR005475). Contains Transketolase%2C C terminal (Interpro|IPR005476) gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0373 YP_0374 YP0374 glpK2 glpK2 395667 397154 + glycerol kinase similar to Yersinia pestis CO92 YPO3312 and Yersinia pestis KIM glpK. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains Glycerol kinase (Interpro|IPR005999%2C (GO:0006072)). Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0374 YP_0375 YP0375 YP_0375 397175 398599 + hypothetical protein similar to Yersinia pestis CO92 YPO3311 and Yersinia pestis KIM y0877 gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0375 YP_0376 YP0376 deoR1 deoR1 398821 399765 - putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3310 and Yersinia pestis KIM y0878. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)) gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0376 YP_0377 YP0377 proP5 proP5 400013 401353 - putative membrane protein similar to Yersinia pestis CO92 YPO3309 and Yersinia pestis KIM y0879. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0377 YP_0378 YP0378 cinA cinA 401541 402158 + Uncharacterized protein (competence- and mitomycin-induced) similar to Yersinia pestis KIM y0880. Contains Competence-damaged protein (Interpro|IPR003396) gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0378 YP_0379 YP0379 recA recA 402273 403343 + RecA protein similar to Yersinia pestis CO92 recA and Yersinia pestis KIM recA. Contains RecA bacterial DNA recombination protein (Interpro|IPR001553%2C (GO:0008094)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0379 YP_0380 YP0380 recX recX 403481 404044 + putative regulatory protein similar to Yersinia pestis CO92 recX and Yersinia pestis KIM oraA. Contains Regulatory protein RecX (Interpro|IPR003783%2C (GO:0006282)) gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0380 YP_0381 YP0381 alaS alaS 404184 406811 + alanyl-tRNA synthetase similar to Yersinia pestis CO92 alaS and Yersinia pestis KIM alaS. Contains Alanyl-tRNA synthetase%2C class IIc (Interpro|IPR002318%2C (GO:0006419)). Contains Phosphoesterase%2C DHHA1 (Interpro|IPR003156%2C (GO:0003676)). Contains Alanyl-transfer RNA synthetase (Interpro|IPR006193%2C (GO:0006419)) gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0381 YP_0382 YP0382 csrA csrA 407061 407246 + carbon storage regulator similar to Yersinia pestis CO92 csrA and Yersinia pestis KIM csrA. Contains Carbon storage regulator (Interpro|IPR003751%2C (GO:0016071)) gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0382 YP_0383 YP0383 YP_0383 408365 408931 + putative hydrolase similar to Yersinia pestis CO92 YPO3303 and Yersinia pestis KIM y0885. Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402) gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0383 YP_0384 YP0384 YP_0384 408928 409356 + putative membrane protein similar to Yersinia pestis CO92 YPO3302 and Yersinia pestis KIM y0886. gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0384 YP_0385 YP0385 gshA gshA 409400 410998 + gamma-glutamate-cysteine ligase similar to Yersinia pestis KIM gshA. Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)). Contains Glutamate--cysteine ligase (Interpro|IPR006334) gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0385 YP_0386 YP0386 luxS luxS 411166 411681 + autoinducer-2 production protein similar to Yersinia pestis CO92 luxS and Yersinia pestis KIM y0888. Contains LuxS protein (Interpro|IPR003815%2C (GO:0009372)) gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0386 YP_0387 YP0387 YP_0387 411770 413053 - putative membrane protein similar to Yersinia pestis CO92 YPO3298 and Yersinia pestis KIM y0890. Contains CBS domain (Interpro|IPR000644). Contains Protein of unknown function DUF21 (Interpro|IPR002550). Contains Transporter associated domain (Interpro|IPR005170) gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0387 YP_0388 YP0388 ccmC1 ccmC1 413122 414015 - putative membrane protein similar to Yersinia pestis CO92 YPO3297 and Yersinia pestis KIM y0891. gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0388 YP_0389 YP0389 ffh ffh 414079 415440 + signal recognition particle protein similar to Yersinia pestis CO92 ffh and Yersinia pestis KIM ffh. Contains GTP-binding signal recognition particle (SRP54) G-domain (Interpro|IPR000897%2C (GO:0006605)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Signal peptide binding (SRP54) M-domain (Interpro|IPR004125%2C (GO:0008249)). Contains Signal recognition particle protein (Interpro|IPR004780%2C (GO:0008548)) gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0389 YP_0391 YP0391 rpsP rpsP 415668 415916 + 30S ribosomal protein S16 similar to Yersinia pestis CO92 rpsP and Yersinia pestis KIM rpsP. Contains Ribosomal protein S16 (Interpro|IPR000307%2C (GO:0006412)) gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0391 YP_0392 YP0392 rimM rimM 415926 416486 + 16S rRNA processing protein similar to Yersinia pestis CO92 rimM and Yersinia pestis KIM y0895. Contains RimM protein (Interpro|IPR002676%2C (GO:0007046)) gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0392 YP_0393 YP0393 trmD trmD 416468 417265 + tRNA (guanine-N1)-methyltransferase similar to Yersinia pestis CO92 trmD and Yersinia pestis KIM trmD. Contains tRNA (guanine-N1-)-methyltransferase (Interpro|IPR002649%2C (GO:0008175)) gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0393 YP_0394 YP0394 rplS rplS 417346 417693 + 50S ribosomal protein L19 similar to Yersinia pestis CO92 rplS and Yersinia pestis KIM rplS. Contains Ribosomal protein L19 (Interpro|IPR001857%2C (GO:0006412)) gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0394 YP_0395 YP0395 YP_0395 417955 418767 - Putative salt-induced outer membrane protein similar to Yersinia pestis KIM y0899 gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0395 YP_0396 YP0396 dcuB dcuB 419045 420390 - similar to gi|16767551|ref|NP_463166.1| (NC_003197) Dcu family%2C anaerobic C4-dicarboxylate transporter [Salmonella typhimurium LT2](len:446 aa). This CDS Contains a frameshift after codons 341. The sequence has been checked and is believed to be correct. pseudogene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0396 YP_0397 YP0397 lytT lytT 420819 421592 - two-component system response regulator similar to Yersinia pestis CO92 YPO3287 and Yersinia pestis KIM y0902. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0397 YP_0398 YP0398 aroF aroF 421761 422837 + 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase similar to Yersinia pestis KIM aroF. Contains DAHP synthetase I/KDSA superfamily (Interpro|IPR006218%2C (GO:0009058)%2C (GO:0016228)). Contains Phospho-2-dehydro-3-deoxyheptonate aldolase%2C subtype 1 (Interpro|IPR006219%2C (GO:0009073)) gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0398 YP_0399 YP0399 tyrA tyrA 422850 423971 + T-protein similar to Yersinia pestis CO92 tyrA and Yersinia pestis KIM tyrA. Contains Chorismate mutase (Interpro|IPR002701%2C (GO:0009073)). Contains Prephenate dehydrogenase (Interpro|IPR003099%2C (GO:0006571)) gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0399 YP_0400 YP0400 pheA1 pheA1 424076 425233 - Prephenate dehydratase Best Blastp hit %3D gi|266771|sp|Q02286|PHEA_ERWHE P-protein [Includes: Chorismate mutase (CM)%3B Prephenate dehydratase (PDT)]%2C gi|281791|pir||S26053 chorismate mutase (EC 5.4.99.5) / prephenate dehydratase (EC 4.2.1.51) pheA [similarity] - Erwinia herbicola%2C gi|43344|emb|CAA42949.1| (X60420) prephenate dehydratase%3B chorismate mutase [Pantoea agglomerans]%2C(len:387 aa)%3B. Contains Prephenate dehydratase (Interpro|IPR001086%2C (GO:0009094)). Contains Chorismate mutase (Interpro|IPR002701%2C (GO:0009073)) gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0400 YP_0401 YP0401 dnaC_4 dnaC_4 425505 426287 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0401 YP_0402 YP0402 YP_0402 426284 427306 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0402 YP_0403 YP0403 YP_0403 427359 428351 + similar to Yersinia pestis KIM y0507. The putative start codon of this CDS locates in the IS100 element%2C so it might be a pseudogene. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) pseudogene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0403 YP_0404 YP0404 putP1 putP1 428425 430080 - putative transmembrane transport protein similar to Yersinia pestis CO92 YPO0251 and Yersinia pestis KIM y0508. Contains Na+/solute symporter (Interpro|IPR001734%2C (GO:0016020)) gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0404 YP_0405 YP0405 YP_0405 430077 430388 - putative membrane protein similar to Yersinia pestis CO92 YPO0252 and Yersinia pestis KIM y0509 gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0405 YP_0406 YP0406 acs acs 430445 432409 - acetyl-coenzyme A synthetase similar to Yersinia pestis CO92 acs and Yersinia pestis KIM acs. Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)) gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0406 YP_0407 YP0407 gltP gltP 433307 434575 + proton glutamate symport protein similar to Yersinia pestis CO92 gltP and Yersinia pestis KIM gltP. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0407 YP_0408 YP0408 citB1 citB1 434753 435385 - putative two-component response regulator similar to Yersinia pestis CO92 YPO0255 and Yersinia pestis KIM y0512. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0408 YP_0409 YP0409 baeS1 baeS1 435398 438187 - two-component sensor/regulator similar to Yersinia pestis CO92 YPO0256 and Yersinia pestis KIM y0513. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0409 YP_0410 YP0410 gspD2 gspD2 438389 439960 + putative type III secretion protein similar to Yersinia pestis CO92 YPO0257 and Yersinia pestis KIM y0514. Contains Bacterial general secretion pathway protein D (Interpro|IPR001775%2C (GO:0016020)). Contains Type III secretion system outer membrane G protein (Interpro|IPR003522%2C (GO:0009306)%2C (GO:0015448)). Contains Bacterial type II secretion system protein D (Interpro|IPR004845%2C (GO:0008565)). Contains Bacterial type II and III secretion system protein (Interpro|IPR004846%2C (GO:0009306)). Contains NolW-like (Interpro|IPR005644) gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0410 YP_0411 YP0411 YP_0411 439947 441176 + putative type-III secretion protein similar to Yersinia pestis CO92 YPO0258 and Yersinia pestis KIM y0515. gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0411 YP_0412 YP0412 YP_0412 441195 441416 + putative type III secretion apparatus similar to Yersinia pestis CO92 YPO0259 and Yersinia pestis KIM y0516 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0412 YP_0413 YP0413 araC1 araC1 441523 442230 + putative AraC-family regulatory protein similar to Yersinia pestis CO92 YPO0260 and Yersinia pestis KIM y0517. . Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0413 YP_0414 YP0414 YP_0414 442240 442455 + putative type III secretion apparatus similar to Yersinia pestis CO92 YPO0260a gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0414 YP_0415 YP0415 YP_0415 442452 442700 + putative type III secretion apparatus similar to Yersinia pestis CO92 YPO0261 and Yersinia pestis KIM y0519 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0415 YP_0416 YP0416 YP_0416 442798 443049 + putative type III secretion apparatus similar to Yersinia pestis CO92 YPO0262 gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0416 YP_0417 YP0417 fliF1 fliF1 443046 443777 + type III secretion system apparatus lipoprotein similar to Yersinia pestis CO92 YPO0263. Contains Type III secretion system outer membrane K protein (Interpro|IPR003282%2C (GO:0009306)%2C (GO:0015448)). Contains Secretory protein YscJ/FliF (Interpro|IPR006182) gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0417 YP_0418 YP0418 YP_0418 443949 444545 + hypothetical protein similar to Yersinia pestis KIM y0523 gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0418 YP_0419 YP0419 YP_0419 444629 445189 + putative type III secretion system component similar to Yersinia pestis KIM y0524 gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0419 YP_0420 YP0420 flhA1 flhA1 445176 447230 + putative type III secretion system component similar to Yersinia pestis KIM y0525. Contains Bacterial type III secretion FHIPEP (Interpro|IPR001712%2C (GO:0016020)). Contains Type III secretion protein HrcV (Interpro|IPR006302) gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0420 YP_0421 YP0421 fliI1 fliI1 447214 448554 + putative type III secretion system ATP synthase similar to Yersinia pestis CO92 YPO0267 and Yersinia pestis KIM fliI. Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C N-terminal (Interpro|IPR004100%2C (GO:0016469)). Contains ATPase FliI/YscN (Interpro|IPR005714%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0015031)%2C (GO:0016887)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATPase FliI/YscN (Interpro|IPR005714%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0015031)%2C (GO:0016887)). Contains Eukaryotic thiol (cysteine) protease (Interpro|IPR000169%2C (GO:0006508)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATPase FliI/YscN (Interpro|IPR005714%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0015031)%2C (GO:0016887)) gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0421 YP_0422 YP0422 sbcC sbcC 448551 448952 + type III secretion system apparatus protein similar to Yersinia pestis CO92 YPO0268 and Yersinia pestis KIM y0527. gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0422 YP_0423 YP0423 YP_0423 448933 449331 + hypothetical protein similar to Yersinia pestis KIM y0528 gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0423 YP_0424 YP0424 fliN1 fliN1 449309 450271 + type III secretion system apparatus protein similar to Yersinia pestis CO92 YPO0269 and Yersinia pestis KIM y0529. Contains Flagellar motor switch FliN protein (Interpro|IPR001172%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009425)). Contains Surface presentation of antigens (SPOA) protein (Interpro|IPR001543) gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0424 YP_0425 YP0425 fliP1 fliP1 450443 451048 + putative type III secretion apparatus protein similar to Yersinia pestis CO92 YPO0270 and Yersinia pestis KIM y0530. Contains Yop virulence translocation protein R (Interpro|IPR005773%2C (GO:0015031)%2C (GO:0016021)). Contains Flagellar transport protein FliP (Interpro|IPR005837%2C (GO:0016020)). Contains Type III secretion system inner membrane P protein (Interpro|IPR005838%2C (GO:0016020)) gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0425 YP_0426 YP0426 fliQ1 fliQ1 451045 451338 + putative type III secretion apparatus protein similar to Yersinia pestis CO92 YPO0271. Contains Bacterial export protein FliQ%2C family 3 (Interpro|IPR002191%2C (GO:0016020)). Contains Type III secretion protein HrpO (Interpro|IPR006306) gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0426 YP_0427 YP0427 fliR1 fliR1 451340 452134 + putative type III secretion apparatus protein similar to Yersinia pestis CO92 YPO0272 and Yersinia pestis KIM y0532. Contains Bacterial export protein%2C family 1 (Interpro|IPR002010%2C (GO:0016020)). Contains Type III secretion protein SpaR/YscT (Interpro|IPR006304) gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0427 YP_0428 YP0428 flhB1 flhB1 452121 453191 + putative type III secretion system component similar to Yersinia pestis KIM y0533. Contains Phosphoglucose isomerase (PGI) (Interpro|IPR001672%2C (GO:0006096)). Contains Type III secretion exporter (Interpro|IPR006135%2C (GO:0016020)). Contains Type III secretion protein HrpY/HrcU (Interpro|IPR006307) gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0428 YP_0429 YP0429 YP_0429 453574 454788 + putative integral membrane protein similar to Yersinia pestis CO92 YPO0274 and Yersinia pestis KIM y0534. Contains Delayed-early response protein/equilibrative nucleoside transporter (Interpro|IPR002259%2C (GO:0016020)) gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0429 YP_0430 YP0430 sirA1 sirA1 454785 455054 + putative redox protein%2C regulator of disulfide bond formation similar to Yersinia pestis CO92 YPO0275 and Yersinia pestis KIM y0535. Contains Protein of unknown function UPF0033 (Interpro|IPR001455%2C (GO:0005554)) gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0430 YP_0431 YP0431 lysR2 lysR2 455132 456118 - putative LysR-family transcriptional regulator similar to Yersinia pestis CO92 YPO0276 and Yersinia pestis KIM y0536. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0431 YP_0432 YP0432 sdaC1 sdaC1 456285 457571 + putative transmembrane transport protein similar to Yersinia pestis CO92 YPO0277 and Yersinia pestis KIM y0537. Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)). Contains Amino acid/polyamine transporter%2C family II (Interpro|IPR002422%2C (GO:0016020)) gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0432 YP_0433 YP0433 metC2 metC2 457617 458798 + cystathionine beta-lyase similar to Yersinia pestis CO92 metC and Yersinia pestis KIM metC. Contains Cys/Met metabolism pyridoxal-phosphate-dependent enzymes (Interpro|IPR000277%2C (GO:0006520)). Contains Cystathionine beta-lyase%2C bacterial (Interpro|IPR006233). Contains Cys/Met metabolism pyridoxal-phosphate-dependent enzymes (Interpro|IPR000277%2C (GO:0006520)). Contains Cystathionine beta-lyase%2C bacterial (Interpro|IPR006233) gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0433 YP_0434 YP0434 hmuV hmuV 458939 459739 - hemin transport system ATP-binding protein similar to Yersinia pestis CO92 hmuV and Yersinia pestis KIM hmuV. Contains Uridine kinase (Interpro|IPR000764%2C (GO:0006224)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0434 YP_0435 YP0435 hmuU hmuU 459732 460736 - hemin transport system permease protein HmuU similar to Yersinia pestis CO92 hmuU and Yersinia pestis KIM hmuU. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)) gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0435 YP_0436 YP0436 hmuT hmuT 460733 461572 - hemin-binding periplasmic protein similar to Yersinia pestis CO92 hmuT and Yersinia pestis KIM hmuT. Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0436 YP_0437 YP0437 hmuS hmuS 461569 462606 - hemin transport protein similar to Yersinia pestis CO92 hmuS and Yersinia pestis KIM hmuS gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0437 YP_0438 YP0438 hmuR hmuR 462725 464755 - hemin receptor precursor similar to Yersinia pestis CO92 hmuR and Yersinia pestis KIM hmuR. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0438 YP_0439 YP0439 YP_0439 464885 465076 - putative hemin uptake protein hemp Best Blastp hit %3D gi|399882|sp|P31516|HEMP_YEREN HEMIN UPTAKE PROTEIN HEMP%2C gi|282050|pir||S28041 hemP protein - Yersinia enterocolitica%2C gi|49122|emb|CAA48249.1| (X68147) hemP [Yersinia enterocolitica]%2C(len:81 aa) gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0439 YP_0440 YP0440 YP_0440 465162 465812 - putative nucleoside-diphosphate-sugar epimerases similar to Yersinia pestis CO92 YPO0284 and Yersinia pestis KIM y0545 gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0440 YP_0441 YP0441 YP_0441 465846 466409 - Putative heme iron utilization protein similar to Yersinia pestis CO92 YPO0285 and Yersinia pestis KIM y0546. gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0441 YP_0442 YP0442 YP_0442 466406 469678 - similar to Yersinia pestis CO92 YPO0286 (putative coproporphyrinogen III oxidase) and Yersinia pestis KIM y0547%3B disrupted by IS100 element pseudogene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0442 YP_0443 YP0443 dnaC_5 dnaC_5 467438 468217 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0443 YP_0444 YP0444 YP_0444 468217 469239 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0444 YP_0445 YP0445 metF2 metF2 470019 470819 - putative methylenetetrahydrofolate reductase similar to Yersinia pestis CO92 YPO0287 and Yersinia pestis KIM y0548. Contains Methylenetetrahydrofolate reductase (Interpro|IPR003171%2C (GO:0006555)) gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0445 YP_0446 YP0446 YP_0446 471134 471622 - putative exported protein similar to Yersinia pestis CO92 YPO0288 and Yersinia pestis KIM y0549 gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0446 YP_0447 YP0447 citE1 citE1 472019 472978 - putative ATP/GTP-binding protein similar to Yersinia pestis CO92 YPO0289 and Yersinia pestis KIM y0550. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0447 YP_0448 YP0448 YP_0448 472978 474057 - hypothetical protein similar to Yersinia pestis CO92 YPO0290 and Yersinia pestis KIM y0551 gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0448 YP_0449 YP0449 YP_0449 474050 474868 - hypothetical protein similar to Yersinia pestis CO92 YPO0291 and Yersinia pestis KIM y0552. gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0449 YP_0450 YP0450 YP_0450 474855 475991 - hypothetical protein similar to Yersinia pestis CO92 YPO0292 and Yersinia pestis KIM y0553 gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0450 YP_0451 YP0451 YP_0451 476003 477064 - hypothetical protein similar to Yersinia pestis CO92 YPO0293 and Yersinia pestis KIM y0554 gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0451 YP_0452 YP0452 terZ terZ 477307 477933 + tellurium resistance protein similar to Yersinia pestis CO92 terZ and Yersinia pestis KIM terZ. Contains Bacterial stress protein (Interpro|IPR003325%2C (GO:0006950)) gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0452 YP_0453 YP0453 terA terA 477942 479117 + putative tellurite resistance protein similar to Yersinia pestis CO92 terA and Yersinia pestis KIM terA. Contains Bacterial stress protein (Interpro|IPR003325%2C (GO:0006950)) gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0453 YP_0454 YP0454 terB terB 479150 479605 + tellurite resistance protein similar to Yersinia pestis CO92 terB and Yersinia pestis KIM terB gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0454 YP_0455 YP0455 terC1 terC1 479627 480664 + tellurium resistance protein similar to Yersinia pestis CO92 terC. Contains Integral membrane protein TerC family (Interpro|IPR005496) gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0455 YP_0456 YP0456 terD terD 480722 481306 + putative tellurium resistance protein similar to Yersinia pestis KIM terD. Contains Bacterial stress protein (Interpro|IPR003325%2C (GO:0006950)) gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0456 YP_0457 YP0457 terE terE 481490 482065 + tellurium resistance protein similar to Yersinia pestis CO92 terE and Yersinia pestis KIM terE. Contains Bacterial stress protein (Interpro|IPR003325%2C (GO:0006950)) gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0457 YP_0458 YP0458 YP_0458 482778 483416 + putative exported protein similar to Yersinia pestis CO92 YPO0301 and Yersinia pestis KIM y0561 gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0458 YP_0459 YP0459 fimD1 fimD1 483667 486045 + putative outer membrane fimbrial usher protein similar to Yersinia pestis CO92 YPO0302 and Yersinia pestis KIM y0562. Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C (GO:0016020)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)) gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0459 YP_0460 YP0460 fimC1 fimC1 486117 486860 + putative fimbrial chaperone similar to Yersinia pestis CO92 YPO0303 and Yersinia pestis KIM y0563. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0460 YP_0461 YP0461 proP6 proP6 486868 487125 + putative membrane protein similar to Yersinia pestis CO92 YPO0304 and Yersinia pestis KIM y0564. gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0461 YP_0462 YP0462 YP_0462 488237 489637 + hypothetical protein similar to Yersinia pestis CO92 YPO0306 and Yersinia pestis KIM y0565. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Zn-finger%2C C2H2 type (Interpro|IPR007087) gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0462 YP_0464 YP0464 glcD1 glcD1 490646 492703 + putative oxidoreductase similar to Yersinia pestis CO92 YPO0308 and Yersinia pestis KIM y0566. Contains Carbohydrate binding domain%2C family V/XII (Interpro|IPR003610%2C (GO:0030246)). Contains Fibronectin%2C type III (Interpro|IPR003961). Contains FAD linked oxidase%2C N-terminal (Interpro|IPR006094%2C (GO:0008246)) gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0464 YP_0465 YP0465 YP_0465 493047 496856 - putative exported protein similar to Yersinia pestis CO92 YPO0309 and Yersinia pestis KIM y0567. Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0465 YP_0466 YP0466 ubiC ubiC 497646 498212 + putative chorismate--pyruvate lyase similar to Yersinia pestis CO92 ubiC and Yersinia pestis KIM ubiC. gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0466 YP_0467 YP0467 ubiA ubiA 498378 499244 + 4-hydroxybenzoate octaprenyltransferase similar to Yersinia pestis CO92 ubiA and Yersinia pestis KIM ubiA. Contains UbiA prenyltransferase (Interpro|IPR000537). Contains 4-hydroxybenzoate polyprenyl transferase%2C proteobacterial (Interpro|IPR006370) gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0467 YP_0468 YP0468 plsB plsB 499425 502031 - glycerol-3-phosphate acyltransferase similar to Yersinia pestis KIM plsB. Contains Phospholipid/glycerol acyltransferase (Interpro|IPR002123%2C (GO:0008152)%2C (GO:0008415)) gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0468 YP_0469 YP0469 dgkA dgkA 502030 502401 + diacylglycerol kinase similar to Yersinia pestis CO92 dgkA and Yersinia pestis KIM dgkA. Contains Prokaryotic diacylglycerol kinase (Interpro|IPR000829%2C (GO:0016020)) gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0469 YP_0470 YP0470 lexA1 lexA1 502526 503134 + LexA repressor similar to Yersinia pestis CO92 lexA and Yersinia pestis KIM lexA. Contains Peptidase family S24 (Interpro|IPR006197%2C (GO:0006508)%2C (GO:0008236)). Contains Peptidase S24%2C C-terminal (Interpro|IPR006198%2C (GO:0006508)%2C (GO:0008236)). Contains LexA DNA-binding region (Interpro|IPR006199%2C (GO:0006508)%2C (GO:0008992)). Contains LexA repressor (Interpro|IPR006200%2C (GO:0006508)%2C (GO:0008992)) gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0470 YP_0471 YP0471 fur1 fur1 503308 503826 - putative regulator similar to Yersinia pestis KIM y0573. Contains Ferric-uptake regulator (Interpro|IPR002481%2C (GO:0006355)) gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0471 YP_0472 YP0472 YP_0472 504072 505109 + putative TIM-barrel enzymes similar to Yersinia pestis CO92 YPO0316 and Yersinia pestis KIM y0574. Contains Protein of unknown function UPF0034 (Interpro|IPR001269%2C (GO:0005554)). Contains TIM-barrel protein yjbN family (Interpro|IPR004653%2C (GO:0005554))%3B possibly dehydrogenases%2C nifR3 family gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0472 YP_0473 YP0473 malF1 malF1 505625 505843 + putative exported protein similar to Yersinia pestis CO92 YPO0318 and Yersinia pestis KIM y0575 gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0473 YP_0474 YP0474 qor1 qor1 506188 507240 - quinone oxidoreductase similar to Yersinia pestis CO92 qor and Yersinia pestis KIM qor. Contains Zinc-containing alcohol dehydrogenase superfamily (Interpro|IPR002085%2C (GO:0008270)). Contains Ribosomal protein L5 (Interpro|IPR002132%2C (GO:0006412)). Contains Quinone oxidoreductase/zeta-crystallin (Interpro|IPR002364%2C (GO:0008270)) gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0474 YP_0475 YP0475 dnaB dnaB 507503 508909 + replicative DNA helicase similar to Yersinia pestis CO92 dnaB and Yersinia pestis KIM dnaB. Contains DnaB helicase (Interpro|IPR001198%2C (GO:0006260)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0475 YP_0476 YP0476 alr alr 509006 510085 + alanine racemase (biosynthetic) similar to Yersinia pestis CO92 alr and Yersinia pestis KIM alr. Contains Alanine racemase (Interpro|IPR000821%2C (GO:0006522)%2C (GO:0008784)). Contains Protein of unknown function UPF0001 (Interpro|IPR001608) gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0476 YP_0477 YP0477 tyrB tyrB 510271 511464 + aromatic-amino-acid aminotransferase similar to Yersinia pestis CO92 tyrB and Yersinia pestis KIM tyrB. Contains Aspartate/other aminotransferase (Interpro|IPR000796%2C (GO:0006520)%2C (GO:0008483)). Contains Aminotransferase%2C class-I (Interpro|IPR004838%2C (GO:0009058)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0477 YP_0478 YP0478 mmcQ mmcQ 511991 512350 + YjbR similar to Yersinia pestis CO92 YPO0323 gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0478 YP_0479 YP0479 uvrA1 uvrA1 512443 515286 - excinuclease ABC subunit A similar to Yersinia pestis CO92 uvrA and Yersinia pestis KIM uvrA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains Excinuclease ABC%2C A subunit (Interpro|IPR004602%2C (GO:0009380)%2C (GO:0009381)) gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0479 YP_0480 YP0480 ssb ssb 515744 516292 + single-strand binding protein similar to Yersinia pestis CO92 ssb and Yersinia pestis KIM ssb. Contains Single-strand binding protein (Interpro|IPR000424) gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0480 YP_0481 YP0481 YP_0481 516539 516856 - hypothetical protein similar to Yersinia pestis KIM y0583 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0481 YP_0482 YP0482 eutG eutG 516867 518015 - putative alcohol dehydrogenase similar to Yersinia pestis CO92 YPO0327 and Yersinia pestis KIM y0584. Contains Iron-containing alcohol dehydrogenase (Interpro|IPR001670%2C (GO:0016491)) gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0482 YP_0483 YP0483 rhaD rhaD 518082 518906 - rhamnulose-1-phosphate aldolase similar to Yersinia pestis CO92 rhaD and Yersinia pestis KIM rhaD. Contains Class II aldolase/adducin%2C N-terminal (Interpro|IPR001303) gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0483 YP_0484 YP0484 rhaA rhaA 518919 520181 - L-rhamnose isomerase similar to Yersinia pestis CO92 rhaA and Yersinia pestis KIM rhaA. gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0484 YP_0485 YP0485 rhaB rhaB 520172 521629 - rhamnulokinase similar to Yersinia pestis CO92 rhaB and Yersinia pestis KIM rhaB. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)) gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0485 YP_0486 YP0486 purM purM 521628 521834 + Phosphoribosylaminoimidazol (AIR) synthetase similar to Yersinia pestis KIM y0588 gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0486 YP_0487 YP0487 rhaS rhaS 522056 522877 + L-rhamnose operon regulatory protein similar to Yersinia pestis CO92 rhaS and Yersinia pestis KIM rhaS. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0487 YP_0488 YP0488 rhaR rhaR 523010 523882 + L-rhamnose operon transcriptional activator similar to Yersinia pestis CO92 rhaR and Yersinia pestis KIM rhaR. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains Cupin domain (Interpro|IPR007113) gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0488 YP_0489 YP0489 rhaT2 rhaT2 524051 525139 - L-rhamnose-proton symport protein similar to Yersinia pestis CO92 rhaT and Yersinia pestis KIM rhaT. Contains RhaT l-rhamnose-proton symport (Interpro|IPR004673%2C (GO:0008645)%2C (GO:0016021)) gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0489 YP_0490 YP0490 YP_0490 525239 525505 + hypothetical protein similar to Yersinia pestis CO92 YPO0335 and Yersinia pestis KIM y0594 gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0490 YP_0491 YP0491 YP_0491 525941 526366 - putative exported protein similar to Yersinia pestis CO92 YPO0337 and Yersinia pestis KIM y0596 gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0491 YP_0492 YP0492 YP_0492 526596 526763 + hypothetical protein similar to Yersinia pestis CO92 YPO0338 gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0492 YP_0493 YP0493 YP_0493 526778 529348 + enhancing factor (viral) similar to Yersinia pestis CO92 YPO0339 and Yersinia pestis KIM y0597. Contains Viral enhancin protein (Interpro|IPR004954). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0493 YP_0494 YP0494 acrR1 acrR1 530002 530577 - putative TetR-family regulatory protein similar to Yersinia pestis CO92 YPO0341 and Yersinia pestis KIM y0598. Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0494 YP_0496 YP0496 gltD1 gltD1 530997 533012 + putative oxidoreductase%2C Fe-S subunit similar to Yersinia pestis KIM y0599. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains NAD binding site (Interpro|IPR000205). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Flavin-containing monooxygenase FMO (Interpro|IPR000960%2C (GO:0006118)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Glutamate synthase%2C NADH/NADPH%2C small subunit 2 (Interpro|IPR006006%2C (GO:0006537)%2C (GO:0016639)) gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0496 YP_0497 YP0497 hydN hydN 533035 533592 + 4Fe-4S ferrodoxin similar to Yersinia pestis CO92 hydN and Yersinia pestis KIM hydN. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)) gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0497 YP_0498 YP0498 fdhF fdhF 533615 535762 + formate dehydrogenase H similar to Yersinia pestis CO92 fdhF and Yersinia pestis KIM fdhF. Contains Formate dehydrogenase%2C alpha subunit (Interpro|IPR006478). Contains Prokaryotic molybdopterin oxidoreductase (Interpro|IPR006655%2C (GO:0006118)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molydopterin dinucleotide binding domain (Interpro|IPR006657). Contains Molybdopterin oxidoreductase Fe4S4 domain (Interpro|IPR006963) gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0498 YP_0499 YP0499 dsbD dsbD 535824 537611 - thiol:disulfide interchange protein similar to Yersinia pestis CO92 dsbD and Yersinia pestis KIM dsbD. Contains Cytochrome c biogenesis protein%2C transmembrane region (Interpro|IPR003834%2C Cellular Component: membrane (GO:0016020)%2C (GO:0017004)). Contains Thioredoxin type domain (Interpro|IPR006662%2C (GO:0006118)). Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0499 YP_0500 YP0500 cutA cutA 537587 537946 - putative cation tolerance protein similar to Yersinia pestis CO92 YPO0346 and Yersinia pestis KIM cutA. Contains CutA1 divalent ion tolerance protein (Interpro|IPR004323) gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0500 YP_0501 YP0501 dcuA dcuA 538131 539432 - anaerobic C4-dicarboxylate transporter similar to Yersinia pestis CO92 dcuA and Yersinia pestis KIM dcuA. Contains Anaerobic c4-dicarboxylate membrane transporter (Interpro|IPR004668%2C (GO:0016021)) gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0501 YP_0502 YP0502 aspA aspA 539552 540988 - aspartate ammonia-lyase similar to Yersinia pestis CO92 aspA and Yersinia pestis KIM aspA. Contains Fumarate lyase (Interpro|IPR000362%2C (GO:0003824)). Contains Delta crystallin (Interpro|IPR003031). Contains Aspartate ammonia-lyase (Interpro|IPR004708%2C (GO:0006531)%2C (GO:0008797)) gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0502 YP_0504 YP0504 fxsA fxsA 541541 542014 + putative membrane protein similar to Yersinia pestis CO92 YPO0349 and Yersinia pestis KIM y0607. gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0504 YP_0505 YP0505 groES groES 542269 542562 + 10 kDa chaperonin similar to Yersinia pestis CO92 groES and Yersinia pestis KIM mopB. Contains Chaperonin Cpn10 (Interpro|IPR001476) gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0505 YP_0506 YP0506 groEL groEL 542609 544255 + 60 kDa chaperonin similar to Yersinia pestis CO92 groEL and Yersinia pestis KIM mopA. Contains Chaperonin Cpn60 (Interpro|IPR001844). Contains Chaperonin Cpn60/TCP-1 (Interpro|IPR002423) gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0506 YP_0508 YP0508 YP_0508 544879 545277 + putative lipoprotein similar to Yersinia pestis CO92 YPO0352. gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0508 YP_0509 YP0509 kamA kamA 545562 546590 - Lysine 2%2C3-aminomutase similar to Yersinia pestis CO92 YPO0353 and Yersinia pestis KIM y0611. Contains Protein of unknown function DUF160 (Interpro|IPR003739) gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0509 YP_0510 YP0510 efp1 efp1 546560 547192 + elongation factor P similar to Yersinia pestis CO92 efp and Yersinia pestis KIM efp. Contains Elongation factor P (EF-P) (Interpro|IPR001059%2C (GO:0006414)) gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0510 YP_0511 YP0511 sugE sugE 547292 547753 + suppresses groEL%2C may be chaperone similar to Yersinia pestis KIM sugE. Contains Small multidrug resistance protein (Interpro|IPR000390). Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0511 YP_0512 YP0512 frdD frdD 547918 548274 - fumarate reductase hydrophobic protein similar to Yersinia pestis CO92 frdD and Yersinia pestis KIM frdD. Contains Fumarate reductase%2C D subunit (Interpro|IPR003418%2C (GO:0016020)) gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0512 YP_0513 YP0513 frdC frdC 548291 548683 - fumarate reductase hydrophobic protein similar to Yersinia pestis CO92 frdC and Yersinia pestis KIM frdC. Contains Fumarate reductase%2C subunit C (Interpro|IPR003510%2C (GO:0006118)%2C (GO:0016020)) gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0513 YP_0514 YP0514 frdB frdB 548700 549434 - fumarate reductase iron-sulfur protein similar to Yersinia pestis CO92 frdB and Yersinia pestis KIM frdB. Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Succinate dehydrogenase/fumarate reductase iron-sulfur protein (Interpro|IPR004489%2C (GO:0006118)%2C (GO:0016491)). Contains 2Fe-2S ferredoxin (Interpro|IPR006058%2C (GO:0006118)%2C (GO:0008042)) gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0514 YP_0515 YP0515 frdA frdA 549427 551250 - fumarate reductase flavoprotein subunit similar to Yersinia pestis CO92 frdA and Yersinia pestis KIM frdA. Contains Myb DNA-binding domain (Interpro|IPR001005%2C (GO:0005634)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Ribokinase (Interpro|IPR002139%2C (GO:0006014)). Contains Fumarate reductase/succinate dehydrogenase%2C FAD-binding site (Interpro|IPR003952%2C (GO:0006118)%2C (GO:0008246)). Contains Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal (Interpro|IPR003953%2C (GO:0006118)%2C (GO:0008246)). Contains Fumarate reductase/succinate dehydrogenase flavoprotein%2C C-terminal (Interpro|IPR004112%2C (GO:0008246)%2C (GO:0016491)). Contains Fumarate reductase%2C flavoprotein subunit (Interpro|IPR005884%2C (GO:0006118)%2C (GO:0008246)%2C (GO:0009061)) gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0515 YP_0516 YP0516 YP_0516 551357 551548 + putative membrane protein similar to Yersinia pestis CO92 YPO0361 gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0516 YP_0517 YP0517 YP_0517 551708 552685 + putative lysyl-tRNA synthetase similar Yersinia pestis CO92 YPO0362 and Yersinia pestis KIM y0618. gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0517 YP_0518 YP0518 YP_0518 552806 556165 - putative membrane transport protein similar to Yersinia pestis CO92 YPO0363 and Yersinia pestis KIM y0619. Contains Mechanosensitive (MS) ion channel (Interpro|IPR006685). Contains Mechanosensitive (MS) ion channel subdomain (Interpro|IPR006686) gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0518 YP_0519 YP0519 psd psd 556189 557070 - phosphatidylserine decarboxylase proenzyme similar to Yersinia pestis CO92 psd and Yersinia pestis KIM psd. Contains Phosphatidylserine decarboxylase-related (Interpro|IPR003817%2C (GO:0008654)). Contains Phosphatidylserine decarboxylase (Interpro|IPR005221) gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0519 YP_0520 YP0520 YP_0520 557395 558447 - putative GTPases similar to Yersinia pestis CO92 YPO0365 and Yersinia pestis KIM y0622. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Protein of unknown function DUF258 (Interpro|IPR004881%2C (GO:0005554)) gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0520 YP_0521 YP0521 orn orn 558500 559192 + Oligoribonuclease (3'->5' exoribonuclease) similar to Yersinia pestis KIM y0623. Contains Exonuclease (Interpro|IPR006055%2C (GO:0005622)) gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0521 YP_0523 YP0523 YP_0523 560137 561372 - putative iron-sulfur cluster-binding protein similar to Yersinia pestis CO92 YPO0367 and Yersinia pestis KIM y0624. Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Fe_S cluster binding (Interpro|IPR004453) gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0523 YP_0524 YP0524 YP_0524 561371 562885 + putative sugar kinase similar to Yersinia pestis CO92 YPO0368 and Yersinia pestis KIM y0625. Contains Protein of unknown function UPF0031 (Interpro|IPR000631%2C (GO:0005554)). Contains YjeF-related protein%2C N-terminal (Interpro|IPR004443%2C (GO:0005554)) gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0524 YP_0525 YP0525 YP_0525 562896 563366 + putative ATPase or kinase similar to Yersinia pestis CO92 YPO0369 and Yersinia pestis KIM y0626. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Protein of unknown function UPF0079 (Interpro|IPR003442) gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0525 YP_0526 YP0526 amiB amiB 563374 565287 + N-acetylmuramoyl-l-alanine amidase II similar to Yersinia pestis KIM amiB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Peptidoglycan-binding LysM (Interpro|IPR002482%2C (GO:0016998)). Contains Cell wall hydrolase/autolysin (Interpro|IPR002508%2C (GO:0009253)) gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0526 YP_0527 YP0527 mutL1 mutL1 565303 567210 + DNA mismatch repair protein similar to Yersinia pestis CO92 mutL and Yersinia pestis KIM mutL. Contains DNA mismatch repair protein (Interpro|IPR002099%2C (GO:0006298)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)) gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0527 YP_0528 YP0528 miaA miaA 567203 568144 + tRNA delta(2)-isopentenylpyrophosphate transferase similar to Yersinia pestis CO92 miaA and Yersinia pestis KIM miaA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains tRNA isopentenyltransferase (Interpro|IPR002627%2C (GO:0008033)) gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0528 YP_0529 YP0529 ymr ymr 568260 568565 + multiple regulator similar to Yersinia pestis CO92 ymr and Yersinia pestis KIM hfq. Contains Host factor Hfq (Interpro|IPR005001%2C (GO:0003723)) gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0529 YP_0530 YP0530 hflX hflX 568664 569950 + GTP-binding protein similar to Yersinia pestis CO92 hflX and Yersinia pestis KIM hflX. Contains Dynamin (Interpro|IPR001401%2C (GO:0005525)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains GTP1/OBG family (Interpro|IPR006073) gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0530 YP_0531 YP0531 hflK hflK 570191 571450 + putative membrane protein similar to Yersinia pestis CO92 hflK and Yersinia pestis KIM hflK. Contains Band 7 protein (Interpro|IPR001107). Contains Stomatin (Interpro|IPR001972). Contains Eggshell protein (Interpro|IPR002952) gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0531 YP_0532 YP0532 hflC1 hflC1 571454 572458 + putative membrane protein similar to Yersinia pestis CO92 hflC and Yersinia pestis KIM hflC. Contains Band 7 protein (Interpro|IPR001107). Contains Band 7 protein (Interpro|IPR001107). Contains Stomatin (Interpro|IPR001972) gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0532 YP_0533 YP0533 YP_0533 572522 572830 + putative membrane protein similar to Yersinia pestis CO92 YPO0377. gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0533 YP_0534 YP0534 purA purA 572918 574228 + adenylosuccinate synthetase similar to Yersinia pestis CO92 purA and Yersinia pestis KIM purA. Contains Adenylosuccinate synthetase (Interpro|IPR001114%2C (GO:0006164)) gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0534 YP_0535 YP0535 YP_0535 574546 575022 + putative transcriptional regulator similar to Yersinia pestis CO92 YPO0379 and Yersinia pestis KIM y0636. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Protein of unknown function UPF0074 (Interpro|IPR000944%2C (GO:0005554)) gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0535 YP_0536 YP0536 rnr rnr 575263 577797 + ribonuclease R similar to Yersinia pestis CO92 rnr and Yersinia pestis KIM vacB. Contains Ribonuclease II (Interpro|IPR001900%2C (GO:0004540)). Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)). Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains VacB and RNase II family 3'-5' exoribonuclease (Interpro|IPR004476%2C (GO:0016070)) gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0536 YP_0537 YP0537 spoU spoU 577916 578656 + putative methylase similar to Yersinia pestis CO92 YPO0381 and Yersinia pestis KIM y0638. Contains tRNA/rRNA methyltransferase (SpoU) (Interpro|IPR001537%2C (GO:0008173)). Contains RNA methyltransferase TrmH family%2C group 3 (Interpro|IPR004441%2C (GO:0009451)) gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0537 YP_0538 YP0538 aidB aidB 579034 580707 + putative acyl-CoA dehydrogenase similar to Yersinia pestis CO92 aidB and Yersinia pestis KIM aidB. Contains Acyl-CoA dehydrogenase (Interpro|IPR006089%2C (GO:0006118)). Contains Acyl-CoA dehydrogenase%2C C-terminal (Interpro|IPR006090%2C (GO:0008246)%2C (GO:0016491)). Contains Acyl-CoA dehydrogenase%2C central domain (Interpro|IPR006091%2C (GO:0006118)). Contains Acyl-CoA dehydrogenase%2C N-terminal (Interpro|IPR006092%2C (GO:0006118)) gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0538 YP_0539 YP0539 YP_0539 580779 580940 - hypothetical protein similar to Yersinia pestis KIM y0640. gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0539 YP_0540 YP0540 YP_0540 581275 582030 + hydrolase of the alpha/beta superfamily similar to Yersinia pestis KIM y0644. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0540 YP_0541 YP0541 YP_0541 582105 582383 + hypothetical protein similar to Yersinia pestis CO92 YPO3540 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0541 YP_0542 YP0542 rpsF rpsF 582397 582789 + 30S ribosomal protein S6 similar to Yersinia pestis CO92 rpsF and Yersinia pestis KIM rpsF. Contains Ribosomal protein S6 (Interpro|IPR000529%2C (GO:0006412)) gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0542 YP_0543 YP0543 priB priB 582795 583115 + primosomal replication protein n similar to Yersinia pestis CO92 YPO3538. Contains Single-strand binding protein (Interpro|IPR000424) gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0543 YP_0544 YP0544 rpsR rpsR 583120 583347 + 30S ribosomal protein S18 similar to Yersinia pestis CO92 rpsR and Yersinia pestis KIM rpsR. Contains Ribosomal protein S18 (Interpro|IPR001648%2C (GO:0006412)) gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0544 YP_0545 YP0545 rplI rplI 583387 583839 + 50S ribosomal protein L9 similar to Yersinia pestis CO92 rplI and Yersinia pestis KIM rplI. Contains Ribosomal protein L9 (Interpro|IPR000244%2C (GO:0006412)) gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0545 YP_0546 YP0546 YP_0546 584143 585165 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0546 YP_0547 YP0547 dnaC_6 dnaC_6 585162 585944 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0547 YP_0548 YP0548 tnp tnp 586075 586452 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3214. Contains Transposase IS200-like (Interpro|IPR002686). gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0548 YP_0549 YP0549 YP_0549 586574 587029 - putative exported protein similar to Yersinia pestis CO92 YPO3534 and Yersinia pestis KIM y0649 gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0549 YP_0550 YP0550 oapA oapA 587169 587909 - Cell envelope opacity-associated protein A similar to Yersinia pestis CO92 YPO3533 and Yersinia pestis KIM y0650 gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0550 YP_0551 YP0551 fklB fklB 588252 588872 + FKBP-type peptidyl-prolyl cis-trans isomerase similar to Yersinia pestis CO92 fklB and Yersinia pestis KIM fklB. Contains Domain amino terminal to FKBP-type peptidyl-prolyl isomerase (Interpro|IPR000774%2C (GO:0006457)). Contains Peptidylprolyl isomerase%2C FKBP-type (Interpro|IPR001179). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0551 YP_0552 YP0552 YP_0552 588970 589635 - Regulator of cell morphogenesis and NO signaling similar to Yersinia pestis CO92 YPO3531 and Yersinia pestis KIM y0652. Contains Protein of unknown function%2C HHE (Interpro|IPR005544) gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0552 YP_0553 YP0553 cpdB cpdB 589790 591760 - 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase precursor similar to Yersinia pestis CO92 cpdB and Yersinia pestis KIM cpdB. Contains Metallo-phosphoesterase (Interpro|IPR004843%2C (GO:0016787)). Contains 5'-nucleotidase%2C N-terminal (Interpro|IPR006146%2C (GO:0009166)%2C (GO:0016788)). Contains 5'-Nucleotidase and apyrase (Interpro|IPR006179%2C (GO:0009166)%2C (GO:0016787)). Contains 2%2C 3 -cyclic-nucleotide 2 -phosphodiesterase (Interpro|IPR006294) gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0553 YP_0554 YP0554 cysQ cysQ 592192 592935 + inositol monophosphatase family protein similar to Yersinia pestis CO92 cysQ and Yersinia pestis KIM cysQ. Contains Inositol monophosphatase (Interpro|IPR000760%2C (GO:0004437)). Contains 3(2)%2C5 -bisphosphate nucleotidase%2C bacterial (Interpro|IPR006240) gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0554 YP_0555 YP0555 YP_0555 592938 593576 - putative exported protein similar to Yersinia pestis CO92 YPO3528 and Yersinia pestis KIM y0655. Contains Conserved hypothetical protein YtfJ (Interpro|IPR006513) gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0555 YP_0556 YP0556 YP_0556 593836 594048 + hypothetical protein similar to Yersinia pestis CO92 YPO3527 and Yersinia pestis KIM y0656 gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0556 YP_0557 YP0557 YP_0557 594156 595487 - putative membrane protein similar to Yersinia pestis CO92 YPO3526 and Yersinia pestis KIM y0657. Contains CBS domain (Interpro|IPR000644). Contains Protein of unknown function DUF21 (Interpro|IPR002550). Contains Transporter associated domain (Interpro|IPR005170) gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0557 YP_0558 YP0558 msrA msrA 595765 596403 - peptide methionine sulfoxide reductase similar to Yersinia pestis CO92 msrA and Yersinia pestis KIM msrA. Contains Peptide methionine sulfoxide reductase (Interpro|IPR002569%2C (GO:0006464)%2C (GO:0008113)) gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0558 YP_0559 YP0559 YP_0559 596678 598414 + putative exported protein similar to Yersinia pestis CO92 YPO3524 and Yersinia pestis KIM y0659. Contains Bacterial surface antigen (D15) (Interpro|IPR000184). Contains Lipocalin-related protein and Bos/Can/Equ allergen (Interpro|IPR000566%2C (GO:0006810)) gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0559 YP_0560 YP0560 YP_0560 598411 602328 + putative exported protein similar to Yersinia pestis CO92 YPO3523 and Yersinia pestis KIM y0661 gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0560 YP_0561 YP0561 YP_0561 602331 602687 + hypothetical protein similar to Yersinia pestis CO92 YPO3522 and Yersinia pestis KIM y0662. Contains Protein of unknown function UPF0131 (Interpro|IPR005347%2C (GO:0005554)) gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0561 YP_0562 YP0562 ppa ppa 602805 603332 - inorganic pyrophosphatase similar to Yersinia pestis CO92 ppa and Yersinia pestis KIM ppa. Contains Inorganic pyrophosphatase (Interpro|IPR001596%2C (GO:0008152)%2C (GO:0016462)) gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0562 YP_0563 YP0563 fbp fbp 603532 604650 - fructose-bisphosphatase similar to Yersinia pestis KIM fbp. Contains Inositol phosphatase/fructose-1%2C6-bisphosphatase (Interpro|IPR000146) gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0563 YP_0564 YP0564 mpl mpl 604716 606098 + UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligase similar to Yersinia pestis CO92 mpl and Yersinia pestis KIM y0665. Contains Cytoplasmic peptidoglycan synthetases%2C N-terminal (Interpro|IPR000713%2C (GO:0005524)). Contains Cytoplasmic peptidoglycan synthetases%2C C-terminal (Interpro|IPR004101%2C (GO:0016874)). Contains UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (Interpro|IPR005757%2C (GO:0007047)%2C (GO:0016874)) gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0564 YP_0565 YP0565 YP_0565 606394 606657 - putative exported protein similar to Yersinia pestis CO92 YPO3518 and Yersinia pestis KIM y0666 gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0565 YP_0566 YP0566 argR argR 607046 607516 - arginine repressor similar to Yersinia pestis CO92 argR and Yersinia pestis KIM argR. Contains Arginine repressor (Interpro|IPR001669%2C (GO:0006355)) gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0566 YP_0567 YP0567 mdh mdh 607980 608918 + malate dehydrogenase similar to Yersinia pestis CO92 mdh and Yersinia pestis KIM mdh. Contains Lactate/malate dehydrogenase (Interpro|IPR001236%2C (GO:0016491)). Contains Malate dehydrogenase (Interpro|IPR001252%2C (GO:0006099)%2C (GO:0016615)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0567 YP_0568 YP0568 nlp nlp 609352 609627 - putative regulator for maltose metabolism similar to Yersinia pestis KIM y0669 gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0568 YP_0569 YP0569 YP_0569 609757 610158 + hypothetical protein similar to Yersinia pestis CO92 YPO3514 and Yersinia pestis KIM y0670 gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0569 YP_0570 YP0570 ispB ispB 610255 611226 - octaprenyl-diphosphate synthase similar to Yersinia pestis CO92 ispB and Yersinia pestis KIM ispB. Contains Polyprenyl synthetase (Interpro|IPR000092%2C (GO:0008299)) gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0570 YP_0571 YP0571 rplU rplU 611438 611797 + 50S ribosomal protein L21 similar to Yersinia pestis CO92 rplU and Yersinia pestis KIM rplU. Contains Ribosomal protein L21 (Interpro|IPR001787%2C (GO:0006412)) gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0571 YP_0572 YP0572 rpmA rpmA 611817 612074 + 50S ribosomal protein L27 similar to Yersinia pestis CO92 rpmA and Yersinia pestis KIM rpmA. Contains Regulator of chromosome condensation%2C RCC1 (Interpro|IPR000408). Contains Ribosomal protein L27 (Interpro|IPR001684%2C (GO:0006412)) gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0572 YP_0573 YP0573 rhaT3 rhaT3 612162 613148 + putative membrane protein similar to Yersinia pestis CO92 YPO3510 and Yersinia pestis KIM y0674. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0573 YP_0574 YP0574 obg obg 613149 614321 + putative GTP-binding protein similar to Yersinia pestis CO92 YPO3509 and Yersinia pestis KIM y0675. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains GTP1/OBG family (Interpro|IPR006073). Contains GTP1/OBG domain (Interpro|IPR006074). Contains GTP1/OBG sub-domain (Interpro|IPR006169) gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0574 YP_0575 YP0575 basS basS 614416 615483 - two-component system sensor protein similar to Yersinia pestis CO92 basS and Yersinia pestis KIM basS. Contains HMW glutenin (Interpro|IPR001419%2C (GO:0045735)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0575 YP_0576 YP0576 basR basR 615480 616142 - two-component system response regulator similar to Yersinia pestis CO92 basR and Yersinia pestis KIM basR. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0576 YP_0577 YP0577 dacB dacB 616148 617596 - penicillin-binding protein 4 precursor similar to Yersinia pestis CO92 dacB and Yersinia pestis KIM dacB. Contains D-Ala-D-Ala carboxypeptidase 3 (S13) family (Interpro|IPR000667%2C (GO:0006508)) gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0577 YP_0578 YP0578 greA greA 617854 618330 + transcription elongation factor similar to Yersinia pestis CO92 greA and Yersinia pestis KIM greA. Contains Prokaryotic transcription elongation factor GreA/GreB (Interpro|IPR001437%2C (GO:0006355)). Contains Prokaryotic transcription elongation factor GreA (Interpro|IPR006359) gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0578 YP_0579 YP0579 YP_0579 618458 618751 - putative RNA-binding protein containing KH domain similar to Yersinia pestis CO92 YPO3504 and Yersinia pestis KIM y0680. Contains Protein of unknown function UPF0044 (Interpro|IPR001890%2C (GO:0005554))%3B possibly ribosomal protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0579 YP_0580 YP0580 ftsJ ftsJ 618886 619527 + ribosomal RNA large subunit methyltransferase J similar to Yersinia pestis CO92 ftsJ and Yersinia pestis KIM ftsJ. Contains Cell division protein FtsJ (Interpro|IPR002877). Contains Ribosomal RNA large subunit methyltransferase J (Interpro|IPR004512%2C (GO:0006364)%2C (GO:0016436)) gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0580 YP_0581 YP0581 ftsH ftsH 619575 621518 + cell division protein similar to Yersinia pestis CO92 ftsH and Yersinia pestis KIM hflB. Contains Peptidase M41 (Interpro|IPR000642%2C (GO:0006508)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains AAA-protein subfamily (Interpro|IPR003960%2C (GO:0005524)). Contains ATP-dependent metalloprotease FtsH (Interpro|IPR005936%2C (GO:0030163)). Contains GTP1/OBG family (Interpro|IPR006073) gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0581 YP_0582 YP0582 folP folP 621638 622471 + dihydropteroate synthase similar to Yersinia pestis CO92 folP and Yersinia pestis KIM folP. Contains Dihydropteroate synthase%2C DHPS (Interpro|IPR000489%2C (GO:0009396)). Contains Dihydropteroate synthase (Interpro|IPR006390) gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0582 YP_0583 YP0583 mrsA mrsA 622481 623821 + putative phosphoglucomutase/phosphomannomutase similar to Yersinia pestis CO92 mrsA and Yersinia pestis KIM mrsA. Contains Phosphoglucomutase/phosphomannomutase (Interpro|IPR005841%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase C terminal (Interpro|IPR005843%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (Interpro|IPR005844%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II (Interpro|IPR005845%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III (Interpro|IPR005846%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucosamine mutase (Interpro|IPR006352) gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0583 YP_0584 YP0584 secG secG 624044 624379 + protein-export membrane protein similar to Yersinia pestis CO92 secG and Yersinia pestis KIM secG. Contains Preprotein translocase SecG subunit (Interpro|IPR004692%2C (GO:0009306)%2C (GO:0016021)) gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0584 YP_0585 YP0585 YP_0585 624899 625363 + hypothetical protein similar to Yersinia pestis CO92 YPO3498 and Yersinia pestis KIM y0686. Contains Domain of unknown function DUF150 (Interpro|IPR003728) gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0585 YP_0586 YP0586 nusA nusA 625385 626872 + N utilization substance protein A similar to Yersinia pestis CO92 nusA and Yersinia pestis KIM nusA. Contains Ribosomal protein S1 (Interpro|IPR000110%2C (GO:0006412)). Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains KH domain (Interpro|IPR004087%2C (GO:0003676)). Contains KH domain%2C type 1 (Interpro|IPR004088%2C (GO:0003676)) gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0586 YP_0587 YP0587 infB infB 626897 629575 + protein chain initiation factor IF-2 similar to Yersinia pestis KIM infB. Contains Initiation factor 2 (Interpro|IPR000178%2C (GO:0006413)). Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains ARF/SAR superfamily (Interpro|IPR006689). Contains Translation initiation factor IF-2%2C N-terminal (Interpro|IPR006847) gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0587 YP_0588 YP0588 rbfA rbfA 629587 630051 + ribosome-binding factor A similar to Yersinia pestis CO92 rbfA and Yersinia pestis KIM rbfA. Contains Ribosome-binding factor A (Interpro|IPR000238%2C (GO:0006364)) gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0588 YP_0589 YP0589 truB truB 630051 631025 + tRNA pseudouridine synthase B similar to Yersinia pestis CO92 truB and Yersinia pestis KIM truB. Contains Pseudouridylate synthase TruB%2C N-terminal (Interpro|IPR002501%2C (GO:0006396)). Contains tRNA pseudouridine synthase B (Interpro|IPR004510%2C (GO:0008033)) gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0589 YP_0590 YP0590 rpsO rpsO 631147 631416 + 30S ribosomal protein S15 similar to Yersinia pestis CO92 rpsO and Yersinia pestis KIM rpsO. Contains Ribosomal protein S15 (Interpro|IPR000589%2C (GO:0006412)). Contains Ribosomal protein S15%2C bacterial chloroplast and mitochondrial type (Interpro|IPR005290%2C (GO:0006412)) gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0590 YP_0591 YP0591 YP_0591 631482 632018 + insertion element IS1661 DNA-binding protein similar to Yersinia pestis CO92 YPO0996 and Yersinia pestis KIM y3440 gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0591 YP_0592 YP0592 tra5C tra5C 632072 632857 + transposase for insertion sequence IS1661 similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0592 YP_0593 YP0593 pnp pnp 633028 635241 + polyribonucleotide nucleotidyltransferase similar to Yersinia pestis CO92 pnp and Yersinia pestis KIM pnp. Contains Ribosomal protein S1 (Interpro|IPR000110%2C (GO:0006412)). Contains 3' exoribonuclease (Interpro|IPR001247%2C (GO:0006396)). Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains KH domain (Interpro|IPR004087%2C (GO:0003676)). Contains KH domain%2C type 1 (Interpro|IPR004088%2C (GO:0003676)) gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0593 YP_0594 YP0594 nlpI nlpI 635366 636250 + lipoprotein NlpI similar to Yersinia pestis CO92 nlpI and Yersinia pestis KIM y0695. Contains TPR repeat (Interpro|IPR001440) gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0594 YP_0595 YP0595 deaD deaD 636422 638431 + inducible ATP-independent RNA helicase similar to Yersinia pestis KIM deaD. Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)). Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains DbpA RNA binding domain (Interpro|IPR005580) gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0595 YP_0596 YP0596 YP_0596 638451 638624 + putative membrane protein similar to Yersinia pestis CO92 YPO3487 and Yersinia pestis KIM y0697 gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0596 YP_0597 YP0597 YP_0597 638667 639035 + hypothetical protein similar to Yersinia pestis CO92 YPO3486 and Yersinia pestis KIM y0698 gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0597 YP_0598 YP0598 hipB1 hipB1 639059 639370 + putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3485 and Yersinia pestis KIM y0699. Contains Helix-turn-helix motif%2C Cro repressor (Interpro|IPR000655%2C (GO:0006355)). Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)) gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0598 YP_0599 YP0599 YP_0599 639625 640680 - Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases similar to Yersinia pestis CO92 YPO3484 and Yersinia pestis KIM y0700. Contains Bacterial luciferase (Interpro|IPR002103) gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0599 YP_0600 YP0600 acrA2 acrA2 641188 642348 + multidrug efflux protein similar to Yersinia pestis CO92 YPO3483 and Yersinia pestis KIM acrA. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)). Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0600 YP_0601 YP0601 acrB1 acrB1 642352 645477 + multidrug efflux protein similar to Yersinia pestis CO92 YPO3482 and Yersinia pestis KIM acrB. Contains Acriflavin resistance protein (Interpro|IPR001036). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Hydrophobe/amphiphile efflux-1 HAE1 (Interpro|IPR004764%2C (GO:0016021)). Contains Acriflavin resistance protein (Interpro|IPR001036). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Hydrophobe/amphiphile efflux-1 HAE1 (Interpro|IPR004764%2C (GO:0016021)) gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0601 YP_0602 YP0602 ibeB ibeB 645479 646885 + putative outer membrane efflux lipoprotein similar to Yersinia pestis CO92 ibeB and Yersinia pestis KIM y0704. Contains Outer membrane efflux protein (Interpro|IPR003423%2C (GO:0006810)) gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0602 YP_0603 YP0603 YP_0603 647026 647925 - Collagenase and related proteases similar to Yersinia pestis CO92 YPO3480 and Yersinia pestis KIM y0705. Contains Peptidase U32 (Interpro|IPR001539%2C (GO:0006508)%2C (GO:0008233)) gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0603 YP_0604 YP0604 YP_0604 647916 648911 - putative protease similar to Yersinia pestis CO92 YPO3479 and Yersinia pestis KIM y0706. Contains Peptidase U32 (Interpro|IPR001539%2C (GO:0006508)%2C (GO:0008233)) gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0604 YP_0605 YP0605 YP_0605 649021 649146 - hypothetical protein similar to Yersinia pestis CO92 YPO3478. gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0605 YP_0606 YP0606 YP_0606 649146 649748 + Putative lipid carrier protein similar to Yersinia pestis KIM y0707. Contains Sterol-binding (Interpro|IPR003033%2C (GO:0005498)) gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0606 YP_0607 YP0607 YP_0607 649742 650248 + putative acetyltransferase similar to Yersinia pestis CO92 YPO3476 and Yersinia pestis KIM y0708. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0607 YP_0608 YP0608 YP_0608 650423 650710 - putative endonuclease containing a URI domain similar to Yersinia pestis CO92 YPO3475 and Yersinia pestis KIM y0709. Contains Excinuclease ABC%2C C subunit%2C N-terminal (Interpro|IPR000305%2C (GO:0006281)) gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0608 YP_0609 YP0609 YP_0609 650941 652959 - hypothetical protein similar to Yersinia pestis CO92 YPO3474 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0609 YP_0610 YP0610 YP_0610 652983 654209 - putative exported protein similar to Yersinia pestis CO92 YPO3473 and Yersinia pestis KIM y0711. gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0610 YP_0611 YP0611 ugpB1 ugpB1 654767 656080 + putative sugar binding protein similar to Yersinia pestis CO92 YPO3472 and Yersinia pestis KIM y0712 gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0611 YP_0612 YP0612 malF2 malF2 656088 656972 + sugar transport system%2C permease protein similar to Yersinia pestis CO92 YPO3471 and Yersinia pestis KIM y0713. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0612 YP_0613 YP0613 malG1 malG1 656991 657830 + sugar transport system%2C permease protein similar to Yersinia pestis CO92 YPO3470 and Yersinia pestis KIM y0714. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0613 YP_0614 YP0614 YP_0614 657842 658932 + similar to Yersinia pestis CO92 YPO3469 and Yersinia pestis KIM y0715. Note there is a frameshift mutation following codon 181. The sequence has been checked and is believed to be correct. pseudogene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0614 YP_0615 YP0615 YP_0615 658947 660113 + hypothetical protein similar to Yersinia pestis CO92 YPO3468 and Yersinia pestis KIM y0716 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0615 YP_0616 YP0616 YP_0616 660230 660655 + hypothetical protein similar to Yersinia pestis CO92 YPO3467 and Yersinia pestis KIM y0717. gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0616 YP_0617 YP0617 YP_0617 660807 661445 + putative nucleoside-diphosphate-sugar epimerases similar to Yersinia pestis CO92 YPO3466 and Yersinia pestis KIM y0718 gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0617 YP_0618 YP0618 phnP phnP 661458 662210 - PhnP protein similar to Yersinia pestis CO92 phnP and Yersinia pestis KIM phnP. Contains Serine proteases%2C subtilase family (Interpro|IPR000209%2C (GO:0006508)). Contains Beta-lactamase-like (Interpro|IPR001279) gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0618 YP_0619 YP0619 phnN phnN 662201 662782 - PhnN protein similar to Yersinia pestis CO92 phnN and Yersinia pestis KIM phnN. Contains Guanylate kinase (Interpro|IPR000619) gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0619 YP_0620 YP0620 phnM phnM 662782 663918 - PhnM protein similar to Yersinia pestis CO92 phnM and Yersinia pestis KIM phnM. Contains Amidohydrolase (Interpro|IPR006680) gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0620 YP_0621 YP0621 phnL1 phnL1 663915 664796 - phosphonates transport ATP-binding protein similar to Yersinia pestis CO92 phnL and Yersinia pestis KIM phnL. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)) gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0621 YP_0623 YP0623 phnK phnK 665023 665880 - phosphonates transport ATP-binding protein similar to Yersinia pestis CO92 phnK and Yersinia pestis KIM phnK. Contains Shikimate kinase (Interpro|IPR000623%2C (GO:0008652)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0623 YP_0624 YP0624 phnJ phnJ 665814 666695 - PhnJ protein similar to Yersinia pestis CO92 phnJ and Yersinia pestis KIM phnJ gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0624 YP_0625 YP0625 phnI phnI 666688 667866 - PhnI protein similar to Yersinia pestis CO92 phnI gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0625 YP_0626 YP0626 phnH phnH 667866 668495 - PhnH protein similar to Yersinia pestis CO92 phnH and Yersinia pestis KIM phnH. gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0626 YP_0627 YP0627 phnG phnG 668492 668968 - PhnG protein similar to Yersinia pestis CO92 phnG and Yersinia pestis KIM phnG gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0627 YP_0628 YP0628 phnF1 phnF1 668969 669694 - putative gntR-family transcriptional regulatory protein similar to Yersinia pestis CO92 phnF and Yersinia pestis KIM phnF. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C MarR family (Interpro|IPR000835%2C (GO:0006355)). Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0628 YP_0630 YP0630 nrdG2 nrdG2 670022 670456 - anaerobic ribonucleoside-triphosphate reductase activating protein similar to Yersinia pestis CO92 nrdG and Yersinia pestis KIM nrdG. Contains Radical-activating enzyme (Interpro|IPR001989%2C (GO:0016491)) gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0630 YP_0631 YP0631 nrdD nrdD 670663 672801 - anaerobic ribonucleoside-triphosphate reductase similar to Yersinia pestis CO92 nrdD and Yersinia pestis KIM nrdD. Contains Formate C-acetyltransferase glycine radical (Interpro|IPR001150%2C (GO:0008152)). Contains ATP cone domain (Interpro|IPR005144) gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0631 YP_0632 YP0632 oppF1 oppF1 673235 673936 - putative ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO3453 and Yersinia pestis KIM y0734. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0632 YP_0633 YP0633 dppD1 dppD1 673938 674846 - putative ATP-binding component of dipeptide transport system similar to Yersinia pestis KIM dppD. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0633 YP_0634 YP0634 dppC1 dppC1 674809 675645 - putative transporter%2C permease protein similar to Yersinia pestis CO92 YPO3451 and Yersinia pestis KIM dppC. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0634 YP_0635 YP0635 dppB1 dppB1 675664 676713 - putative transporter%2C permease protein similar to Yersinia pestis CO92 YPO3450 and Yersinia pestis KIM y0737. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)) gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0635 YP_0636 YP0636 ddpA ddpA 676809 678388 - similar to gi|26250893|ref|NP_756933.1| Putative conserved protein [Escherichia coli CFT073](522aa).Also similar to gi|15966166|ref|NP_386519.1| (NC_003047) PUTATIVE DIPEPTIDE BINDING PERIPLASMIC PROTEIN [Sinorhizobium meliloti](len:546 aa). There is a frameshiftafter codon 390. The sequence has been checked and is believed to be correct. pseudogene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0636 YP_0637 YP0637 YP_0637 679015 679473 + hypothetical protein similar to Yersinia pestis CO92 YPO3447 and Yersinia pestis KIM y0739. Contains Conserved hypothetical protein 22 (Interpro|IPR004375%2C (GO:0005554)) gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0637 YP_0638 YP0638 argI argI 679780 680787 - ornithine carbamoyltransferase chain I similar to Yersinia pestis CO92 argI and Yersinia pestis KIM argI. Contains Aspartate carbamoyltransferase (Interpro|IPR002082%2C (GO:0009347)). Contains Ornithine carbamoyltransferase (Interpro|IPR002292%2C (GO:0009348)). Contains Aspartate/ornithine carbamoyltransferase (Interpro|IPR006130%2C (GO:0016597)%2C (GO:0016743)). Contains Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain (Interpro|IPR006131%2C (GO:0016597)%2C (GO:0016743)). Contains Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain (Interpro|IPR006132%2C (GO:0006520)%2C (GO:0016743)) gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0638 YP_0639 YP0639 YP_0639 680999 681430 + hypothetical protein similar to Yersinia pestis CO92 YPO3445 and Yersinia pestis KIM y0741 gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0639 YP_0640 YP0640 wecD2 wecD2 681937 682440 - putative acetyltransferase similar to Yersinia pestis CO92 YPO3444 and Yersinia pestis KIM y0742. Contains Eukaryotic thiol (cysteine) protease (Interpro|IPR000169%2C (GO:0006508)). Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0640 YP_0641 YP0641 valS valS 682583 685480 - valyl-tRNA synthetase similar to Yersinia pestis CO92 valS and Yersinia pestis KIM valS. Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Aminoacyl-tRNA synthetase%2C class Ia (Interpro|IPR002300%2C (GO:0006418)). Contains Valyl-tRNA synthetase%2C class Ia (Interpro|IPR002303%2C (GO:0006438)) gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0641 YP_0642 YP0642 holC holC 685493 685942 - DNA polymerase III%2C chi subunit similar to Yersinia pestis CO92 holC gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0642 YP_0643 YP0643 pepA pepA 686093 687604 - cytosol aminopeptidase similar to Yersinia pestis CO92 pepA and Yersinia pestis KIM pepA. Contains Cytosol aminopeptidase (Interpro|IPR000819%2C (GO:0006508)) gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0643 YP_0644 YP0644 YP_0644 687884 688978 + putative membrane protein similar to Yersinia pestis CO92 YPO3440 and Yersinia pestis KIM y0747. Contains Predicted permease YjgP/YjgQ family (Interpro|IPR005495%2C (GO:0016021)) gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0644 YP_0645 YP0645 YP_0645 688978 690054 + putative membrane protein similar to Yersinia pestis CO92 YPO3439 and Yersinia pestis KIM y0748. Contains Predicted permease YjgP/YjgQ family (Interpro|IPR005495%2C (GO:0016021)) gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0645 YP_0646 YP0646 intB intB 690406 691701 + integrase similar to Yersinia pestis CO92 intB and Yersinia pestis KIM intB. Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)) gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0646 YP_0647 YP0647 YP_0647 691753 693765 + hypothetical protein similar to Yersinia pestis CO92 YPO3437 and Yersinia pestis KIM y0750. Contains Protein of unknown function DUF262 (Interpro|IPR004919%2C (GO:0005554)) gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0647 YP_0648 YP0648 YP_0648 693746 694867 + similar to Yersinia pestis KIM y0751. The stop codon of this CDS locates in IS100 element%2C so it seems to be a pseudogene. Contains Heat shock protein Hsp90 (Interpro|IPR001404%2C (GO:0003754)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)) pseudogene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0648 YP_0649 YP0649 dnaC_7 dnaC_7 694918 695700 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0649 YP_0650 YP0650 YP_0650 695697 696719 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0650 YP_0651 YP0651 tnp_6 tnp_6 696830 697288 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y0754 for IS1541. Contains Transposase IS200-like (Interpro|IPR002686). gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0651 YP_0652 YP0652 YP_0652 697620 698084 - putative yhbH sigma 54 modulator similar to Yersinia pestis KIM y0910. Contains Sigma 54 modulation protein/ribosomal protein S30EA (Interpro|IPR003489) gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0652 YP_0653 YP0653 nrfG1 nrfG1 698337 699068 - putative lipoprotein similar to Yersinia pestis CO92 YPO3278 and Yersinia pestis KIM y0911. Contains Protein of unknown function UPF0169 (Interpro|IPR005156) gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0653 YP_0654 YP0654 rluD rluD 699204 700181 + ribosomal large subunit pseudouridine synthase D similar to Yersinia pestis CO92 rluD and Yersinia pestis KIM sfhB. Contains RNA-binding S4 (Interpro|IPR002942%2C (GO:0003723)). Contains Pseudouridine synthase (Interpro|IPR006145). Contains Pseudouridine synthase%2C Rlu (Interpro|IPR006224%2C (GO:0004730)). Contains Pseudouridine synthase%2C RluD (Interpro|IPR006225%2C (GO:0004730)) gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0654 YP_0655 YP0655 YP_0655 700183 700914 + hypothetical protein similar to Yersinia pestis CO92 YPO3276 and Yersinia pestis KIM y0913. Contains Protein of unknown function DUF152 (Interpro|IPR003730) gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0655 YP_0656 YP0656 clpB1 clpB1 701023 703617 + Clp ATPase similar to Yersinia pestis CO92 clpB and Yersinia pestis KIM clpB. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Clp%2C N terminal (Interpro|IPR004176%2C (GO:0005524)). Contains GTP1/OBG family (Interpro|IPR006073). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)) gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0656 YP_0657 YP0657 YP_0657 709720 710061 - putative lipoprotein similar to Yersinia pestis CO92 YPO3274 and Yersinia pestis KIM y0915 gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0657 YP_0658 YP0658 pssA pssA 710123 711481 - CDP-diacylglycerol--serine O-phosphatidyltransferase similar to Yersinia pestis CO92 pssA and Yersinia pestis KIM pssA. Contains Phospholipase D/Transphosphatidylase (Interpro|IPR001736%2C (GO:0008152)) gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0658 YP_0659 YP0659 YP_0659 711654 714296 - Acyl-CoA synthetase (NDP forming) similar to Yersinia pestis KIM y0917. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains CoA Binding Domain (Interpro|IPR003781) gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0659 YP_0660 YP0660 YP_0660 714339 715088 - hypothetical protein similar to Yersinia pestis CO92 YPO3271 and Yersinia pestis KIM y0918. Contains DTW domain (Interpro|IPR005636) gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0660 YP_0661 YP0661 trxC trxC 715258 715695 - thioredoxin 2 similar to Yersinia pestis CO92 trxC and Yersinia pestis KIM trxC. Contains Thioredoxin (Interpro|IPR005746%2C (GO:0006118)). Contains Thioredoxin type domain (Interpro|IPR006662%2C (GO:0006118)). Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0661 YP_0662 YP0662 yfiF yfiF 715932 717113 + putative tRNA/rRNA methyltransferase similar to Yersinia pestis CO92 yfiF and Yersinia pestis KIM y0920. Contains tRNA/rRNA methyltransferase (SpoU) (Interpro|IPR001537%2C (GO:0008173)) gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0662 YP_0663 YP0663 emrB emrB 717236 718771 - multidrug resistance protein B similar to Yersinia pestis CO92 emrB and Yersinia pestis KIM emrB. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Drug resistance transporter EmrB/QacA subfamily (Interpro|IPR004638%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0663 YP_0664 YP0664 emrA emrA 718810 719994 - multidrug resistance protein A similar to Yersinia pestis CO92 emrA and Yersinia pestis KIM emrA. Contains Efflux pump membrane protein Emr (Interpro|IPR005694%2C (GO:0006855)%2C (GO:0019866)). Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0664 YP_0666 YP0666 emrR emrR 720366 720902 - MarR-family transcriptional regulatory protein similar to Yersinia pestis CO92 emrR and Yersinia pestis KIM emrR. Contains Bacterial regulatory protein%2C MarR family (Interpro|IPR000835%2C (GO:0006355)) gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0666 YP_0667 YP0667 YP_0667 721050 721391 - putative membrane protein similar to Yersinia pestis CO92 YPO3265 and Yersinia pestis KIM y0924. Contains Thromboxane receptor (Interpro|IPR001105%2C (GO:0016021)) gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0667 YP_0668 YP0668 azlC azlC 721388 722161 - putative amino acid transporter similar to Yersinia pestis CO92 YPO3264 and Yersinia pestis KIM y0925. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains AzlC protein (Interpro|IPR004471%2C (GO:0016021)) gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0668 YP_0669 YP0669 proP7 proP7 722321 723520 - putative sugar transporter similar to Yersinia pestis CO92 YPO3263 and Yersinia pestis KIM y0926. Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0669 YP_0670 YP0670 YP_0670 723748 724215 - hypothetical protein similar to Yersinia pestis CO92 YPO3262 and Yersinia pestis KIM y0927. gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0670 YP_0671 YP0671 gatA gatA 724244 725641 - putative amidase similar to Yersinia pestis CO92 YPO3261 and Yersinia pestis KIM y0928. Contains Amidase (Interpro|IPR000120%2C (GO:0004040)) gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0671 YP_0672 YP0672 YP_0672 725638 725820 - hypothetical protein similar to Yersinia pestis KIM y0929 gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0672 YP_0673 YP0673 YP_0673 725810 725968 + hypothetical protein similar to Yersinia pestis KIM y0930 gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0673 YP_0674 YP0674 rpiR1 rpiR1 726139 726984 + putative rpiR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3259 and Yersinia pestis KIM y0931. Contains Helix-turn-helix protein RpiR (Interpro|IPR000281%2C (GO:0006355)). Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)) gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0674 YP_0676 YP0676 artI2 artI2 727312 728100 + putative amino acid ABC transporter%2C periplasmic protein similar to Yersinia pestis CO92 YPO3257 and Yersinia pestis KIM y0932. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)) gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0676 YP_0677 YP0677 artM1 artM1 728113 728781 + putative amino acid ABC transporter%2C permease protein similar to Yersinia pestis CO92 YPO3256 and Yersinia pestis KIM y0933. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0677 YP_0678 YP0678 artM2 artM2 728778 729431 + putative amino acid ABC transporter%2C permease protein similar to Yersinia pestis CO92 YPO3255 and Yersinia pestis KIM y0934. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0678 YP_0679 YP0679 glnQ1 glnQ1 729412 730158 + putative amino acid ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO3254 and Yersinia pestis KIM glnQ. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)) gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0679 YP_0680 YP0680 YP_0680 730190 733493 + similar to gi|16126841|ref|NP_421405.1|%2C aminotransferase%2C class V [Caulobacter crescentus CB15]%2C and gi|21106370|gb|AAM35192.1| (AE011655) serine-pyruvate aminotransferase [Xanthomonas axonopodis pv. citri str. 306]%2C(len:418 aa)%3B disrupted by IS100 element pseudogene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0680 YP_0681 YP0681 dnaC_8 dnaC_8 731164 731946 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0681 YP_0682 YP0682 YP_0682 731943 732965 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0682 YP_0683 YP0683 argE1 argE1 733490 734794 + putative amino acid hydrolase similar to Yersinia pestis CO92 YPO3249 and Yersinia pestis KIM y0939. Contains ArgE/dapE/ACY1/CPG2/yscS (Interpro|IPR001261%2C (GO:0006508)%2C (GO:0008237)). Contains Peptidase M20/M25/M40 (Interpro|IPR002933%2C (GO:0006508)%2C (GO:0008237)) gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0683 YP_0684 YP0684 hxuB hxuB 735883 737673 + putative surface-exposed protein similar to Yersinia pestis CO92 hxuB and Yersinia pestis KIM y0941 gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0684 YP_0685 YP0685 hmwA hmwA 737714 743446 + putative adhesin similar to Yersinia pestis CO92 hmwA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0685 YP_0686 YP0686 hmwC hmwC 743601 745454 + putative accessory processing protein similar to Yersinia pestis CO92 hmwC and Yersinia pestis KIM y0944. Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)) gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0686 YP_0687 YP0687 YP_0687 745456 746202 + hypothetical protein similar to Yersinia pestis CO92 YPO3245 and Yersinia pestis KIM y0945 gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0687 YP_0688 YP0688 caiA caiA 746374 748821 - putative acyl-CoA dehydrogenase similar to Yersinia pestis CO92 YPO3244 and Yersinia pestis KIM y0946. Contains Acyl-CoA dehydrogenase%2C C-terminal (Interpro|IPR006090%2C (GO:0008246)%2C (GO:0016491)). Contains Acyl-CoA dehydrogenase%2C N-terminal (Interpro|IPR006092%2C (GO:0006118)) gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0688 YP_0689 YP0689 lpcA lpcA 749061 749642 + phosphoheptose isomerase similar to Yersinia pestis CO92 lpcA and Yersinia pestis KIM gmhA. Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)). Contains Phosphoheptose isomerase (Interpro|IPR004515%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009244)) gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0689 YP_0690 YP0690 YP_0690 749839 750618 + putative glutamine amidotransferase similar to Yersinia pestis CO92 YPO3242 and Yersinia pestis KIM y0948. Contains Glutamine amidotransferase%2C class-II (Interpro|IPR000583%2C (GO:0008152)%2C (GO:0016003)) gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0690 YP_0691 YP0691 YP_0691 750583 751335 - putative exported protein similar to Yersinia pestis CO92 YPO3241 and Yersinia pestis KIM y0949. gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0691 YP_0693 YP0693 nqrA1 nqrA1 751735 753162 + NADH-ubiquinone oxidoreductase subunit A similar to Yersinia pestis CO92 nqrA and Yersinia pestis KIM nqrA. gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0693 YP_0694 YP0694 nqrB1 nqrB1 753166 754407 + NADH-ubiquinone oxidoreductase subunit B similar to Yersinia pestis CO92 nqrB and Yersinia pestis KIM nqrB. Contains Ribonucleotide reductase large subunit (Interpro|IPR000788%2C (GO:0006260)). Contains NQR2 and RnfD/E related proteins (Interpro|IPR004338%2C (GO:0016020)) gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0694 YP_0695 YP0695 nqrC1 nqrC1 754340 755197 + Na+-translocating NADH-quinone reductase subunit C similar to Yersinia pestis CO92 nqrC and Yersinia pestis KIM nqrC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0695 YP_0696 YP0696 nqrD1 nqrD1 755190 755819 + Na+-translocating NADH-quinone reductase subunit D similar to Yersinia pestis CO92 nqrD and Yersinia pestis KIM nqrD. Contains RnfA-Nqr electron transport subunit (Interpro|IPR003667%2C (GO:0016020)) gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0696 YP_0697 YP0697 nqrE1 nqrE1 755820 756422 + Na+-translocating NADH-quinone reductase subunit E similar to Yersinia pestis CO92 nqrE and Yersinia pestis KIM y0955. Contains RnfA-Nqr electron transport subunit (Interpro|IPR003667%2C (GO:0016020)) gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0697 YP_0698 YP0698 nqrF nqrF 756438 757661 + NADH-uniquinone oxidoreductase subunit F similar to Yersinia pestis CO92 nqrF and Yersinia pestis KIM nqrF. Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains Oxidoreductase FAD/NAD(P)-binding (Interpro|IPR001433%2C (GO:0006118)%2C (GO:0008246)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)) gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0698 YP_0699 YP0699 apbE apbE 757642 758724 + thiamine biosynthesis lipoprotein similar to Yersinia pestis CO92 apbE and Yersinia pestis KIM y0957. Contains ApbE-like lipoprotein (Interpro|IPR003374%2C (GO:0009228)) gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0699 YP_0700 YP0700 YP_0700 758737 758964 + putative exported protein similar to Yersinia pestis CO92 YPO3233 gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0700 YP_0701 YP0701 ugpQ1 ugpQ1 759208 760155 - putative exported protein similar to Yersinia pestis CO92 YPO3232 and Yersinia pestis KIM y0958. Contains Glycerophosphoryl diester phosphodiesterase (Interpro|IPR004129%2C (GO:0006071)%2C (GO:0008889)) gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0701 YP_0702 YP0702 dinP dinP 760499 761569 + DNA-damage-inducible protein P similar to Yersinia pestis CO92 dinP and Yersinia pestis KIM dinP. Contains UMUC-like DNA-repair protein (Interpro|IPR001126%2C (GO:0006281)) gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0702 YP_0703 YP0703 pepD1 pepD1 761683 763143 - aminoacyl-histidine dipeptidase similar to Yersinia pestis CO92 pepD and Yersinia pestis KIM pepD. Contains X-His dipeptidase (Interpro|IPR001160%2C (GO:0006508)%2C (GO:0008769)). Contains Peptidase M20/M25/M40 (Interpro|IPR002933%2C (GO:0006508)%2C (GO:0008237)) gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0703 YP_0705 YP0705 lysR3 lysR3 765018 765929 + putative LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3228 and Yersinia pestis KIM y0961. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)) gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0705 YP_0706 YP0706 YP_0706 766389 767993 - putative carbohydrate-binding protein similar to Yersinia pestis CO92 YPO3227. Contains PKD domain (Interpro|IPR000601). Contains Chitin-binding%2C domain 3 (Interpro|IPR004302) gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0706 YP_0707 YP0707 proP8 proP8 768190 768495 - putative membrane protein similar to Yersinia pestis CO92 YPO3226 gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0707 YP_0708 YP0708 gpt gpt 768922 769380 + xanthine-guanine phosphoribosyltransferase similar to Yersinia pestis CO92 gpt and Yersinia pestis KIM gpt. Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Purine/pyrimidine phosphoribosyl transferase (Interpro|IPR002375) gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0708 YP_0709 YP0709 YP_0709 769489 770754 + hydrolase of the alpha/beta superfamily similar to Yersinia pestis KIM y0964. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0709 YP_0710 YP0710 crl crl 770814 771215 + curlin genes regulatory protein similar to Yersinia pestis CO92 crl and Yersinia pestis KIM crl gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0710 YP_0711 YP0711 proB proB 771392 772495 + glutamate 5-kinase similar to Yersinia pestis CO92 proB and Yersinia pestis KIM proB. Contains Aspartate/glutamate/uridylate kinase (Interpro|IPR001048%2C (GO:0008652)). Contains Glutamate 5-kinase (Interpro|IPR001057%2C (GO:0006561)). Contains PUA domain (Interpro|IPR002478%2C (GO:0003723)). Contains Glutamate 5-kinase%2C bacterial form (Interpro|IPR005715%2C (GO:0006561)) gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0711 YP_0712 YP0712 proA proA 772505 773764 + gamma-glutamyl phosphate reductase similar to Yersinia pestis CO92 proA and Yersinia pestis KIM proA. Contains Gamma-glutamyl phosphate reductase GPR (Interpro|IPR000965%2C (GO:0006561)). Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0712 YP_0714 YP0714 YP_0714 774092 774850 + hypothetical protein similar to Yersinia pestis CO92 YPO3220 and Yersinia pestis KIM y0968 gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0714 YP_0715 YP0715 YP_0715 775033 775302 + putative membrane protein similar to Yersinia pestis CO92 YPO3219 and Yersinia pestis KIM y0969 gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0715 YP_0717 YP0717 smtA1 smtA1 775548 776069 + SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO3218 and Yersinia pestis KIM y0970. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)) gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0717 YP_0719 YP0719 ksgA1 ksgA1 776769 777356 + putative methyltransferase similar to Yersinia pestis CO92 YPO3216 and Yersinia pestis KIM y0971. gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0719 YP_0720 YP0720 aroK2 aroK2 777603 778127 + Shikimate kinase similar to Yersinia pestis CO92 aroL and Yersinia pestis KIM aroL. Contains Shikimate kinase (Interpro|IPR000623%2C (GO:0008652)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0720 YP_0722 YP0722 YP_0722 778617 778904 + hypothetical protein similar to Yersinia pestis CO92 YPO3213 and Yersinia pestis KIM y0973 gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0722 YP_0723 YP0723 rdgC rdgC 779140 780051 - recombination associated protein RdgC similar to Yersinia pestis CO92 rdgC and Yersinia pestis KIM y0974 gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0723 YP_0724 YP0724 nagC1 nagC1 780384 781298 + Transcriptional regulators similar to Yersinia pestis CO92 YPO3211 and Yersinia pestis KIM y0975. Contains ROK family (Interpro|IPR000600) gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0724 YP_0725 YP0725 sbcC2 sbcC2 781759 785448 - ATP-dependent dsDNA exonuclease similar to Yersinia pestis KIM sbcC. Contains Tropomyosin (Interpro|IPR000533). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)) gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0725 YP_0726 YP0726 sbcD sbcD 785445 786689 - exonuclease SbcD similar to Yersinia pestis CO92 sbcD and Yersinia pestis KIM sbcD. Contains Exonuclease SbcD (Interpro|IPR004593%2C (GO:0006259)). Contains Metallo-phosphoesterase (Interpro|IPR004843%2C (GO:0016787)) gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0726 YP_0727 YP0727 phoB phoB 786927 787646 + phosphate regulon transcriptional regulatory protein similar to Yersinia pestis CO92 phoB and Yersinia pestis KIM phoB. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0727 YP_0728 YP0728 phoR phoR 787671 788987 + phosphate regulon sensor protein PhoR similar to Yersinia pestis CO92 phoR and Yersinia pestis KIM phoR. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0728 YP_0729 YP0729 pstS1 pstS1 789009 790073 + phosphate binding protein similar to Yersinia pestis CO92 pstS and Yersinia pestis KIM y0980. Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0729 YP_0730 YP0730 brnQ brnQ 790547 791866 + branched-chain amino acid transport system II carrier protein similar to Yersinia pestis CO92 brnQ and Yersinia pestis KIM brnQ. Contains Branched-chain amino acid transport system II carrier protein (Interpro|IPR004685%2C (GO:0016021)) gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0730 YP_0731 YP0731 ansP1 ansP1 791942 793333 + proline permease transport protein similar to Yersinia pestis KIM proY. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0731 YP_0732 YP0732 malZ malZ 793894 795723 + putative maltodextrin glucosidase similar to Yersinia pestis CO92 malZ and Yersinia pestis KIM malZ. Contains Glycoside hydrolase family 13 (Interpro|IPR006046%2C (GO:0005975)). Contains Alpha amylase%2C catalytic domain (Interpro|IPR006047%2C (GO:0005975)). Contains Alpha amylase%2C catalytic subdomain (Interpro|IPR006589%2C (GO:0005975)) gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0732 YP_0733 YP0733 fabG2 fabG2 795878 796558 + putative short-chain dehydrogenase similar to Yersinia pestis CO92 YPO3199 and Yersinia pestis KIM y0984. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0733 YP_0734 YP0734 ggt ggt 796766 798530 - similar to many gamma-glutamyltranspeptidase%3B GGT%2C such as gi|386533|gb|AAC60442.1| gamma-glutamyltranspeptidase%3B GGT [Pseudomonas](575 aa). There is a frameshift in a 10G repeat after codon 80. The sequence has been checked and is believed to be correct. pseudogene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0734 YP_0737 YP0737 ahpC ahpC 798919 799521 - putative alkyl hydroperoxide reductase subunit c similar to Yersinia pestis CO92 ahpC and Yersinia pestis KIM y0988. Contains Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (Interpro|IPR000866) gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0737 YP_0738 YP0738 YP_0738 799840 800448 - hypothetical protein similar to Yersinia pestis CO92 YPO3193 and Yersinia pestis KIM y0989. gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0738 YP_0739 YP0739 queA queA 800624 801694 + S-adenosylmethionine:tRNA ribosyltransferase-isomerase similar to Yersinia pestis CO92 queA and Yersinia pestis KIM queA. Contains Queuosine biosynthesis protein (Interpro|IPR003699%2C (GO:0008616)) gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0739 YP_0740 YP0740 tgt tgt 801787 802911 + queuine tRNA-ribosyltransferase similar to Yersinia pestis CO92 tgt and Yersinia pestis KIM tgt. Contains Queuine/other tRNA-ribosyltransferase (Interpro|IPR002616%2C (GO:0006400)%2C (GO:0008479)%2C (GO:0008616)). Contains Queuine tRNA-ribosyltransferase (Interpro|IPR004803%2C (GO:0008616)) gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0740 YP_0741 YP0741 yajC yajC 802957 803358 + putative membrane protein similar to Yersinia pestis CO92 YPO3190 and Yersinia pestis KIM y0992. Contains YajC (Interpro|IPR003849) gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0741 YP_0742 YP0742 secD1 secD1 803386 805233 + protein-export membrane protein SecD similar to Yersinia pestis CO92 secD and Yersinia pestis KIM secD. Contains Signal peptidase (Interpro|IPR000508%2C (GO:0006508)%2C (GO:0016020)). Contains SecD/SecF/SecDF export membrane protein (Interpro|IPR003335%2C (GO:0015628)). Contains SecD export membrane protein (Interpro|IPR005791%2C (GO:0006886)%2C (GO:0019866)) gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0742 YP_0743 YP0743 secF secF 805178 806212 + protein-export membrane protein SecF similar to Yersinia pestis CO92 secF and Yersinia pestis KIM secF. Contains SecD/SecF/SecDF export membrane protein (Interpro|IPR003335%2C (GO:0015628)). Contains Cytochrome c-type biogenesis protein CcmB (Interpro|IPR003544%2C (GO:0017004)). Contains SecF protein (Interpro|IPR005665%2C (GO:0006886)%2C (GO:0019866)) gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0743 YP_0744 YP0744 v1 v1 806368 806877 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase IS200-like (Interpro|IPR002686) gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0744 YP_0745 YP0745 YP_0745 807175 807870 + hypothetical protein similar to Yersinia pestis CO92 YPO3186 and Yersinia pestis KIM y0997 gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0745 YP_0746 YP0746 YP_0746 807903 808496 + putative membrane protein similar to Yersinia pestis CO92 YPO3185 and Yersinia pestis KIM y0998 gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0746 YP_0747 YP0747 YP_0747 808567 809016 + putative transcriptional regulator%2C consists of a Zn-ribbon and ATP-cone domains similar to Yersinia pestis CO92 YPO3184 and Yersinia pestis KIM y0999. Contains Protein of unknown function DUF193 (Interpro|IPR003796). Contains ATP cone domain (Interpro|IPR005144) gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0747 YP_0748 YP0748 ribD ribD 809166 810275 + bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase similar to Yersinia pestis CO92 ribD and Yersinia pestis KIM ribD. Contains Cytidine/deoxycytidylate deaminase%2C zinc-binding region (Interpro|IPR002125%2C (GO:0016787)). Contains Bacterial bifunctional deaminase-reductase%2C C-terminal (Interpro|IPR002734%2C (GO:0009231)). Contains Riboflavin biosynthesis protein RibD (Interpro|IPR004794%2C (GO:0009231)) gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0748 YP_0749 YP0749 ribH ribH 810351 810881 + 6%2C7-dimethyl-8-ribityllumazine synthase similar to Yersinia pestis CO92 ribH and Yersinia pestis KIM ribH. Contains 6%2C7-dimethyl-8-ribityllumazine synthase (Interpro|IPR002180%2C (GO:0009349)) gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0749 YP_0750 YP0750 nusB nusB 810902 811318 + N utilization substance protein B similar to Yersinia pestis CO92 nusB and Yersinia pestis KIM nusB. Contains Antitermination protein NusB (Interpro|IPR006027%2C (GO:0006355)) gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0750 YP_0751 YP0751 thiL thiL 811559 812548 + thiamine-monophosphate kinase similar to Yersinia pestis CO92 thiL and Yersinia pestis KIM thiL. Contains AIR synthase related protein (Interpro|IPR000728%2C (GO:0003824)). Contains Thiamine-monophosphate kinase (Interpro|IPR006283) gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0751 YP_0752 YP0752 pgpA pgpA 812541 813026 + phosphatidylglycerophosphatase A similar to Yersinia pestis CO92 pgpA gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0752 YP_0753 YP0753 tnp_7 tnp_7 813189 813698 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase IS200-like (Interpro|IPR002686). gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0753 YP_0754 YP0754 dxs dxs 813877 815736 - 1-deoxy-D-xylulose 5-phosphate synthase similar to Yersinia pestis CO92 dxs and Yersinia pestis KIM dxs. Contains Transketolase%2C N terminal (Interpro|IPR005474). Contains Transketolase%2C central region (Interpro|IPR005475). Contains Transketolase%2C C terminal (Interpro|IPR005476). Contains Deoxyxylulose-5-phosphate synthase (Interpro|IPR005477%2C (GO:0016114)) gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0754 YP_0755 YP0755 ispA ispA 815892 816812 - geranyltranstransferase similar to Yersinia pestis CO92 ispA and Yersinia pestis KIM ispA. Contains Polyprenyl synthetase (Interpro|IPR000092%2C (GO:0008299)) gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0755 YP_0756 YP0756 xseB xseB 816817 817113 - exodeoxyribonuclease VII small subunit similar to Yersinia pestis CO92 xseB and Yersinia pestis KIM xseB. Contains Exonuclease VII%2C small subunit (Interpro|IPR003761%2C (GO:0006308)%2C (GO:0009318)) gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0756 YP_0757 YP0757 YP_0757 817153 817323 + hypothetical protein similar to Yersinia pestis CO92 YPO3174 and Yersinia pestis KIM y1011 gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0757 YP_0758 YP0758 thiI thiI 817421 818872 + thiamine biosynthesis protein similar to Yersinia pestis CO92 thiI and Yersinia pestis KIM y1012. Contains Rhodanese-like (Interpro|IPR001763). Contains Thiamine biosynthesis protein (Interpro|IPR003720%2C (GO:0009228)). Contains THUMP domain (Interpro|IPR004114) gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0758 YP_0759 YP0759 thiJ1 thiJ1 818940 819536 - 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme similar to Yersinia pestis CO92 thiJ and Yersinia pestis KIM thiJ. Contains Family of unknown function ThiJ/PfpI (Interpro|IPR002818). Contains DJ-1 protein (Interpro|IPR006287) gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0759 YP_0760 YP0760 apbA apbA 819493 820404 - 2-dehydropantoate 2-reductase similar to Yersinia pestis CO92 apbA and Yersinia pestis KIM apbA. Contains Ketopantoate reductase ApbA/PanE (Interpro|IPR003710%2C (GO:0006206)%2C (GO:0008677)) gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0760 YP_0761 YP0761 YP_0761 820576 821127 + hypothetical protein similar to Yersinia pestis CO92 YPO3170 and Yersinia pestis KIM y1016. gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0761 YP_0762 YP0762 proP9 proP9 821251 822621 - putative transporter similar to Yersinia pestis CO92 YPO3169 and Yersinia pestis KIM y1017. Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0762 YP_0763 YP0763 cyoE cyoE 823099 824007 - protoheme IX farnesyltransferase similar to Yersinia pestis CO92 cyoE and Yersinia pestis KIM cyoE. Contains Vacuolar H+-transporting two-sector ATPase%2C C subunit (Interpro|IPR000245%2C (GO:0016020)). Contains UbiA prenyltransferase (Interpro|IPR000537). Contains Protoheme IX farnesyltransferase (Interpro|IPR006369) gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0763 YP_0764 YP0764 cyoD cyoD 824000 824332 - cytochrome O ubiquinol oxidase subunit CyoD similar to Yersinia pestis CO92 cyoD. Contains Prokaryotic Cytochrome C oxidase subunit IV (Interpro|IPR005171) gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0764 YP_0765 YP0765 cyoC cyoC 824332 824946 - cytochrome O ubiquinol oxidase subunit III similar to Yersinia pestis CO92 cyoC and Yersinia pestis KIM cyoC. Contains Cytochrome c oxidase%2C subunit III (Interpro|IPR000298%2C (GO:0016020)) gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0765 YP_0766 YP0766 cyoB cyoB 824936 826927 - cytochrome O ubiquinol oxidase subunit I similar to Yersinia pestis CO92 cyoB and Yersinia pestis KIM cyoB. Contains Cytochrome c oxidase%2C subunit I (Interpro|IPR000883%2C (GO:0016020)). Contains Copper-transporting ATPase (Interpro|IPR001756%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0766 YP_0767 YP0767 cyoA cyoA 826932 827888 - cytochrome O ubiquinol oxidase subunit II similar to Yersinia pestis CO92 cyoA and Yersinia pestis KIM cyoA. Contains Copper center Cu(A) (Interpro|IPR001505%2C (GO:0005507)). Contains Cytochrome o ubiquinol oxidase subunit II (Interpro|IPR006333) gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0767 YP_0768 YP0768 YP_0768 828258 829085 - putative exported protein similar to Yersinia pestis CO92 YPO3163 and Yersinia pestis KIM y1022. gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0768 YP_0769 YP0769 ampG ampG 829317 830849 - Beta-lactamase induction signal transducer AmpG similar to Yersinia pestis CO92 ampG and Yersinia pestis KIM ampG. Contains AmpG-related permease (Interpro|IPR004752). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0769 YP_0770 YP0770 YP_0770 830913 831497 - putative lipoprotein similar to Yersinia pestis CO92 YPO3161 and Yersinia pestis KIM y1024. Contains Uncharacterized lipoprotein (Interpro|IPR005619) gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0770 YP_0771 YP0771 bolA1 bolA1 831840 832160 + BolA protein similar to Yersinia pestis CO92 bolA and Yersinia pestis KIM bolA. Contains BolA-like protein (Interpro|IPR002634) gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0771 YP_0772 YP0772 YP_0772 832301 832504 + hypothetical protein similar to Yersinia pestis CO92 YPO3159 gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0772 YP_0773 YP0773 tig tig 832577 833881 + Trigger factor similar to Yersinia pestis CO92 tig and Yersinia pestis KIM tig. Contains Peptidylprolyl isomerase%2C FKBP-type (Interpro|IPR001179). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Trigger factor (Interpro|IPR005215) gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0773 YP_0774 YP0774 clpP clpP 834343 834966 + ATP-dependent Clp protease proteolytic subunit ClpP similar to Yersinia pestis CO92 clpP and Yersinia pestis KIM clpP. Contains Clp protease (Interpro|IPR001907%2C (GO:0006508)%2C (GO:0008462)) gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0774 YP_0775 YP0775 clpX clpX 835172 836443 + ATP-dependent Clp protease ATP-binding subunit ClpX similar to Yersinia pestis CO92 clpX and Yersinia pestis KIM clpX. Contains CbxX/CfqX superfamily (Interpro|IPR000641%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains ATP-dependent Clp protease ATP-binding subunit ClpX (Interpro|IPR004487%2C (GO:0005524)) gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0775 YP_0776 YP0776 lon lon 836638 838992 + ATP-dependent protease La similar to Yersinia pestis CO92 lon and Yersinia pestis KIM lon. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)). Contains ATP-dependent protease La%2C LON (Interpro|IPR003111%2C (GO:0006510)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains ATP-dependent protease La (Interpro|IPR004815%2C (GO:0006510)) gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0776 YP_0777 YP0777 hupB hupB 839210 839482 + DNA-binding protein HU-beta similar to Yersinia pestis CO92 hupB and Yersinia pestis KIM hupB. Contains Histone-like bacterial DNA-binding protein (Interpro|IPR000119%2C (GO:0003677)) gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0777 YP_0778 YP0778 ppiD ppiD 839783 841669 + peptidyl-prolyl cis-trans isomerase D similar to Yersinia pestis CO92 ppiD and Yersinia pestis KIM y1031. Contains PpiC-type peptidyl-prolyl cis-trans isomerase (Interpro|IPR000297) gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0778 YP_0779 YP0779 comEA comEA 841809 842255 + putative exported protein similar to Yersinia pestis CO92 YPO3152 and Yersinia pestis KIM y1032. Contains Helix-hairpin-helix motif (Interpro|IPR000445%2C (GO:0003677)). Contains Competence protein ComEA helix-hairpin-helix region (Interpro|IPR004509) gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0779 YP_0780 YP0780 fcbC1 fcbC1 842591 843016 + putative thioesterase similar to Yersinia pestis CO92 YPO3151 and Yersinia pestis KIM y1033. Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824)). Contains 4-hydroxybenzoyl-CoA thioesterase (Interpro|IPR006684%2C (GO:0016787)) gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0780 YP_0781 YP0781 YP_0781 843102 843800 - putative ATPase (PP-loop superfamily)%2C confers aluminum resistance similar to Yersinia pestis CO92 YPO3150 and Yersinia pestis KIM y1034. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains ExsB protein (Interpro|IPR004479%2C (GO:0005554)) gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0781 YP_0782 YP0782 oppA1 oppA1 844065 845768 - ABC-type dipeptide/oligopeptide/nickel transport systems%2C periplasmic components similar to Yersinia pestis CO92 YPO3149 and Yersinia pestis KIM y1035. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0782 YP_0783 YP0783 cof1 cof1 845873 846694 + putative haloacid dehalogenase-like hydrolase similar to Yersinia pestis CO92 YPO3148 and Yersinia pestis KIM cof. Contains Cof protein (Interpro|IPR000150%2C (GO:0005554)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IIB (Interpro|IPR006379) gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0783 YP_0784 YP0784 cysK1 cysK1 846906 847946 - putative Pyridoxal-phosphate dependent protein similar to Yersinia pestis CO92 YPO3147 and Yersinia pestis KIM y1037 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0784 YP_0785 YP0785 lrp1 lrp1 848072 848533 + putative AsnC-family regulatory protein similar to Yersinia pestis CO92 YPO3146 and Yersinia pestis KIM y1038. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)) gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0785 YP_0786 YP0786 mdlA mdlA 848635 850401 + putative ABC transporter (ATP-binding protein) similar to Yersinia pestis CO92 mdlA and Yersinia pestis KIM mdlA. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0786 YP_0787 YP0787 mdlB1 mdlB1 850367 852217 + putative ATP-binding component of a transport system similar to Yersinia pestis KIM mdlB. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0787 YP_0788 YP0788 glnK glnK 852570 852917 + nitrogen regulatory protein P-II similar to Yersinia pestis CO92 glnK and Yersinia pestis KIM glnK. Contains Nitrogen regulatory protein P-II (Interpro|IPR002187%2C (GO:0006808)%2C (GO:0030234)). Contains P-II protein urydylation site (Interpro|IPR002332) gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0788 YP_0789 YP0789 amtB amtB 852999 854294 + putative ammonium transporter similar to Yersinia pestis CO92 YPO3142 and Yersinia pestis KIM amtB. Contains Ammonium transporter (Interpro|IPR001905%2C (GO:0006810)%2C (GO:0016020)). Contains Blood group Rhesus C/E and D polypeptide (Interpro|IPR002229) gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0789 YP_0790 YP0790 tesB tesB 854554 855441 - acyl-CoA thioesterase II similar to Yersinia pestis KIM tesB. Contains Acyl-CoA thioesterase (Interpro|IPR003703%2C (GO:0006637)%2C (GO:0016291)) gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0790 YP_0791 YP0791 YP_0791 855671 856192 + putative lipoprotein similar to Yersinia pestis CO92 YPO3140 and Yersinia pestis KIM y1044 gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0791 YP_0792 YP0792 YP_0792 856328 856873 - putative 6-O-methylguanine DNA methyltransferase family protein similar to Yersinia pestis CO92 YPO3139 and Yersinia pestis KIM y1045. Contains Methylated-DNA-[protein]-cysteine S-methyltransferase (Interpro|IPR001497%2C (GO:0006281)) gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0792 YP_0793 YP0793 ymoA ymoA 857605 857808 - modulating protein YmoA (histone-like protein) similar to Yersinia pestis CO92 ymoA and Yersinia pestis KIM hha gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0793 YP_0794 YP0794 YP_0794 857857 858225 - hypothetical protein similar to Yersinia pestis CO92 YPO3137 and Yersinia pestis KIM y1047 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0794 YP_0795 YP0795 YP_0795 858384 858737 - hypothetical protein similar to Yersinia pestis CO92 YPO3136. Contains Endoplasmic reticulum targeting sequence (Interpro|IPR000886) gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0795 YP_0796 YP0796 rpmJ2 rpmJ2 859611 859754 - putative ribosomal protein L36 similar to Yersinia pestis CO92 YPO3135. Contains Ribosomal protein L36 (Interpro|IPR000473%2C (GO:0006412)) gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0796 YP_0797 YP0797 rpmE2 rpmE2 859770 860093 - putative ribosomal protein similar to Yersinia pestis CO92 YPO3134 and Yersinia pestis KIM y1048. Contains Ribosomal protein L31 (Interpro|IPR002150%2C (GO:0006412)) gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0797 YP_0798 YP0798 acrB2 acrB2 860216 863368 - multidrug efflux protein similar to Yersinia pestis CO92 acrB and Yersinia pestis KIM acrB. Contains Acriflavin resistance protein (Interpro|IPR001036). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Hydrophobe/amphiphile efflux-1 HAE1 (Interpro|IPR004764%2C (GO:0016021)). Contains Acriflavin resistance protein (Interpro|IPR001036). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Hydrophobe/amphiphile efflux-1 HAE1 (Interpro|IPR004764%2C (GO:0016021)) gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0798 YP_0799 YP0799 acrA3 acrA3 863385 864572 - multidrug efflux protein similar to Yersinia pestis CO92 acrA and Yersinia pestis KIM acrA. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)). Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0799 YP_0800 YP0800 acrR2 acrR2 864717 865373 + putative tetR-family transcriptional regulatory protein similar to Yersinia pestis CO92 acrR and Yersinia pestis KIM acrR. Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0800 YP_0801 YP0801 dsrE2 dsrE2 865386 865739 + conserved hypothetical protein involved in intracellular sulfur reduction similar to Yersinia pestis CO92 YPO3130 and Yersinia pestis KIM y1052. Contains DsrE-like protein (Interpro|IPR003787) gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0801 YP_0802 YP0802 aefA aefA 865927 869397 + putative potassium efflux system similar to Yersinia pestis CO92 YPO3129 and Yersinia pestis KIM aefA. Contains Mechanosensitive (MS) ion channel (Interpro|IPR006685). Contains Mechanosensitive (MS) ion channel subdomain (Interpro|IPR006686) gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0802 YP_0803 YP0803 YP_0803 869771 869938 - hypothetical protein similar to Yersinia pestis CO92 YPO3128 and Yersinia pestis KIM y1055. gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0803 YP_0804 YP0804 priC priC 870097 870633 - primosomal replication protein n'' similar to Yersinia pestis CO92 priC and Yersinia pestis KIM y1056 gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0804 YP_0805 YP0805 YP_0805 870834 871214 + putative phage protein similar to Yersinia pestis KIM y1058 gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0805 YP_0806 YP0806 apt1 apt1 871453 872016 + adenine phosphoribosyltransferase similar to Yersinia pestis CO92 apt and Yersinia pestis KIM apt. Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Purine/pyrimidine phosphoribosyl transferase (Interpro|IPR002375). Contains Adenine phosphoribosyl transferase (Interpro|IPR005764%2C (GO:0006168)). Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)) gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0806 YP_0807 YP0807 dnaX dnaX 872672 874648 + DNA polymerase III subunit Tau (Contains DNA polymerase III subunit Gamma) similar to Yersinia pestis CO92 dnaX and Yersinia pestis KIM dnaX. Contains Replication factor C conserved domain (Interpro|IPR000862%2C (GO:0006260)). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)) gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0807 YP_0808 YP0808 YP_0808 874704 875036 + hypothetical protein similar to Yersinia pestis CO92 YPO3121 and Yersinia pestis KIM y1061. Contains Conserved hypothetical protein 103 (Interpro|IPR004401%2C (GO:0005554)) gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0808 YP_0809 YP0809 recR recR 875036 875641 + recombination protein RecR similar to Yersinia pestis CO92 recR and Yersinia pestis KIM recR. Contains RecR protein (Interpro|IPR000093%2C (GO:0006310)). Contains Toprim sub-domain (Interpro|IPR006154%2C (GO:0006304)). Contains TOPRIM (Interpro|IPR006171%2C (GO:0006304)) gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0809 YP_0810 YP0810 YP_0810 875656 875814 + hypothetical protein similar to Yersinia pestis KIM y1063. gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0810 YP_0811 YP0811 htpG htpG 875833 877707 + heat shock protein HtpG similar to Yersinia pestis CO92 htpG and Yersinia pestis KIM htpG. Contains Heat shock protein Hsp90 (Interpro|IPR001404%2C (GO:0003754)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)) gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0811 YP_0812 YP0812 adk adk 877934 878578 + adenylate kinase similar to Yersinia pestis CO92 adk and Yersinia pestis KIM adk. Contains Adenylate kinase (Interpro|IPR000850%2C (GO:0005524)). Contains Adenylate kinase%2C subfamily (Interpro|IPR006259) gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0812 YP_0813 YP0813 hemH hemH 878668 879630 + ferrochelatase similar to Yersinia pestis CO92 hemH and Yersinia pestis KIM hemH. Contains Ferrochelatase (Interpro|IPR001015%2C (GO:0006783)) gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0813 YP_0814 YP0814 ddhD ddhD 880228 881217 + cdp-6-deoxy-delta-3%2C4-glucoseen reductase similar to Yersinia pestis CO92 ddhD and Yersinia pestis KIM ascD. Contains Phthalate dioxygenase reductase (Interpro|IPR000951%2C (GO:0006118)%2C (GO:0008246)). Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains Phenol hydroxylase reductase (Interpro|IPR001221%2C (GO:0006118)). Contains Oxidoreductase FAD/NAD(P)-binding (Interpro|IPR001433%2C (GO:0006118)%2C (GO:0008246)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)). Contains 2Fe-2S ferredoxin (Interpro|IPR006058%2C (GO:0006118)%2C (GO:0008042)) gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0814 YP_0815 YP0815 ddhA ddhA 881243 882028 + glucose-1-phosphate cytidylyltransferase similar to Yersinia pestis CO92 ddhA and Yersinia pestis KIM y1068. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains Nucleotidyl transferase (Interpro|IPR005835%2C (GO:0009058)%2C (GO:0016779)) gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0815 YP_0816 YP0816 wcaG1 wcaG1 881964 883106 + putative CDP-D-glucose-4%2C6-dehydratase similar to Yersinia pestis KIM y1069. gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0816 YP_0817 YP0817 ddhC ddhC 883124 884437 + putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase similar to Yersinia pestis CO92 ddhC. Contains DegT/DnrJ/EryC1/StrS aminotransferase (Interpro|IPR000653) gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0817 YP_0818 YP0818 prt prt 884534 885331 + paratose synthase similar to Yersinia pestis CO92 prt and Yersinia pestis KIM y1071. gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0818 YP_0819 YP0819 hemY hemY 885332 886615 + putative exported protein similar to Yersinia pestis CO92 wbyH and Yersinia pestis KIM y1072. Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)) gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0819 YP_0820 YP0820 YP_0820 886677 888031 + similar to Yersinia pestis CO92 wzx and Yersinia pestis KIM y1074. There is a frameshift mutation following codon 225. The sequence has been checked and is believed to be correct. pseudogene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0820 YP_0821 YP0821 wbyI wbyI 888042 888963 + similar to gi|6580720|emb|CAB63296.1| (AJ251712) glycosyltransferase-like protein WbyI [Yersinia pseudotuberculosis]%2C(len:327 aa). There is a frameshift after codon 227. The sequence has been checked and is believed to be correct. pseudogene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0821 YP_0822 YP0822 wbyJ wbyJ 889135 890277 + putative mannosyltransferase similar to Yersinia pestis CO92 wbyJ and Yersinia pestis KIM y1076. gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0822 YP_0823 YP0823 wzy wzy 890274 891495 + similar to previouly sequenced Yersinia pseudotuberculosis O-unit polymerase-like protein Wzy TR:Q9RCB5 (EMBL:AJ251712) (406 aa) There is a frameshift after codon 145.The sequence has been checked and is believed to be correct. pseudogene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0823 YP_0824 YP0824 wbyK wbyK 891708 892757 + putative mannosyltransferase similar to Yersinia pestis CO92 wbyK and Yersinia pestis KIM y1078. Contains Glycosyl transferase%2C family 1 (Interpro|IPR001296%2C (GO:0009058)) gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0824 YP_0825 YP0825 YP_0825 892773 893895 + similar to gi|6580724|emb|CAB63300.1| (AJ251712) GDP-mannose-4%2C6-dehydratase [Yersinia pseudotuberculosis]%2C(len:373 aa). There is a frameshift after codon 156. The sequence has been checked and is believed to be correct. pseudogene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0825 YP_0826 YP0826 wcaG2 wcaG2 893901 894866 + putative nucleotide di-P-sugar epimerase or dehydratase similar to Yersinia pestis KIM wcaG. gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0826 YP_0827 YP0827 manC manC 895054 896465 + similar to Yersinia pestis CO92 manC and Yersinia pestis KIM cpsB. There is a frameshift mutation following codon 54. The sequence has been checked and is believed to be correct. pseudogene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0827 YP_0828 YP0828 wbyL wbyL 896468 897211 + putative glycosyltransferase similar to Yersinia pestis CO92 wbyL and Yersinia pestis KIM y1082. Contains Glycosyl transferase%2C family 2 (Interpro|IPR001173) gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0828 YP_0829 YP0829 manB1 manB1 897216 898589 + phosphomannomutase similar to Yersinia pestis CO92 manB and Yersinia pestis KIM cpsG gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0829 YP_0830 YP0830 wzz wzz 898637 899788 + O-antigen chain length determinant similar to Yersinia pestis CO92 wzz. Contains Lipopolysaccharide biosynthesis (Interpro|IPR003856%2C (GO:0016020)) gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0830 YP_0831 YP0831 gsk gsk 899992 901296 + inosine-guanosine kinase similar to Yersinia pestis CO92 gsk and Yersinia pestis KIM gsk. Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173) gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0831 YP_0832 YP0832 rosB rosB 901393 903084 - putative potassium antiporter similar to Yersinia pestis CO92 rosB and Yersinia pestis KIM rosB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains HPr protein%2C serine phosphorylation site (Interpro|IPR002114%2C (GO:0009401)). Contains TrkA-N (Interpro|IPR003148%2C (GO:0006813)). Contains Potassium efflux system protein (Interpro|IPR004771%2C (GO:0006812)%2C (GO:0016021)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)). Contains Sodium/hydrogen exchanger (Interpro|IPR006153%2C (GO:0006885)%2C (GO:0016021)) gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0832 YP_0833 YP0833 rosA rosA 903319 904533 - putative membrane efflux protein similar to Yersinia pestis CO92 rosA and Yersinia pestis KIM rosA. Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0833 YP_0834 YP0834 ushA ushA 904815 906470 + similar to gi|11262846|pir||JC7221 UDP(uridine 5'-diphosphate)-sugar hydrolase Enterobacter aerogenes(len:550 aa). There are two frameshit after codon 84 and condon 322. The sequence has been checked and is believed to be correct. pseudogene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0834 YP_0835 YP0835 YP_0835 906574 906858 - hypothetical protein similar to Yersinia pestis CO92 YPO3089 and Yersinia pestis KIM y1089. gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0835 YP_0836 YP0836 ebsC ebsC 907150 907638 - Aminoacyl-tRNA editing domain similar to Yersinia pestis KIM y1090. Contains Conserved hypothetical protein 11 (Interpro|IPR004369%2C (GO:0006355)) gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0836 YP_0837 YP0837 YP_0837 907893 908702 - hypothetical protein similar to Yersinia pestis CO92 YPO3087 and Yersinia pestis KIM y1091 gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0837 YP_0838 YP0838 zntA1 zntA1 909223 912108 - cation-translocating ATPase similar to Yersinia pestis KIM y1093. Contains Cation-transporting ATPase A%2C P type (Interpro|IPR000579%2C (GO:0016020)). Contains H+ transporting ATPase%2C proton pump (Interpro|IPR000695%2C (GO:0016020)). Contains Copper-transporting ATPase (Interpro|IPR001756%2C (GO:0016020)). Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Copper-transporting ATPase 1 (Interpro|IPR001877%2C (GO:0016020)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains Heavy metal transport/detoxification protein (Interpro|IPR006121%2C (GO:0006823)). Contains Heavy metal binding (Interpro|IPR006191). Contains HAD-superfamily hydrolase%2C subfamily IIB (Interpro|IPR006379). Contains Copper-translocating P-type ATPase (Interpro|IPR006403). Contains Heavy metal translocating P-type ATPase (Interpro|IPR006416) gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0838 YP_0839 YP0839 cueR cueR 912315 912734 + putative regulatory protein similar to Yersinia pestis CO92 cueR and Yersinia pestis KIM y1094. Contains Bacterial regulatory protein%2C MerR family (Interpro|IPR000551%2C (GO:0006355)) gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0839 YP_0840 YP0840 YP_0840 912843 913292 - putative membrane protein similar to Yersinia pestis CO92 YPO3084 and Yersinia pestis KIM y1095 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0840 YP_0841 YP0841 hflC2 hflC2 913295 914209 - Membrane protease subunits%2C stomatin/prohibitin homologs similar to Yersinia pestis CO92 YPO3083 and Yersinia pestis KIM y1096. Contains Band 7 protein (Interpro|IPR001107). Contains Stomatin (Interpro|IPR001972) gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0841 YP_0842 YP0842 YP_0842 914404 915273 - putative thioredoxin similar to Yersinia pestis CO92 YPO3082 and Yersinia pestis KIM y1097. Contains Mitochondrial substrate carrier (Interpro|IPR001993%2C (GO:0006810)). Contains Thioredoxin type domain (Interpro|IPR006662%2C (GO:0006118)). Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0842 YP_0843 YP0843 fabG3 fabG3 915350 916126 - putative short-chain dehydrogenase similar to Yersinia pestis CO92 YPO3081 and Yersinia pestis KIM y1098. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0843 YP_0844 YP0844 tesA tesA 916513 917181 - putative acyl-CoA thioesterase similar to Yersinia pestis CO92 tesA and Yersinia pestis KIM tesA. Contains Glutelin (Interpro|IPR000480%2C (GO:0045735)). Contains Lipolytic enzyme%2C G-D-S-L family (Interpro|IPR001087%2C (GO:0003824)) gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0844 YP_0845 YP0845 phnL2 phnL2 917119 917805 + putative ABC transporter ATP-binding protein similar to Yersinia pestis CO92 YPO3079 and Yersinia pestis KIM y1100. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0845 YP_0846 YP0846 YP_0846 917790 920231 + putative permease similar to Yersinia pestis CO92 YPO3078 and Yersinia pestis KIM y1101. Contains Protein of unknown function DUF214 (Interpro|IPR003838) gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0846 YP_0847 YP0847 purK purK 920275 921339 - phosphoribosylaminoimidazole carboxylase ATPase subunit PurK similar to Yersinia pestis CO92 purK and Yersinia pestis KIM purK. Contains ATP-dependent carboxylate-amine ligase-like%2C ATP-grasp (Interpro|IPR003135). Contains Phosphoribosylaminoimidazole carboxylase%2C ATPase subunit (Interpro|IPR005875%2C (GO:0009320)) gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0847 YP_0848 YP0848 purE purE 921336 921860 - phosphoribosylaminoimidazole carboxylase catalytic subunit PurE similar to Yersinia pestis CO92 purE and Yersinia pestis KIM purE. Contains 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase (Interpro|IPR000031%2C (GO:0009320)) gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0848 YP_0850 YP0850 YP_0850 922156 922878 - hypothetical protein similar to Yersinia pestis CO92 YPO3075 and Yersinia pestis KIM y1105. Contains Metallo-phosphoesterase (Interpro|IPR004843%2C (GO:0016787)) gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0850 YP_0851 YP0851 ppiB ppiB 922889 923383 - peptidyl-prolyl cis-trans isomerase B similar to Yersinia pestis CO92 ppiB and Yersinia pestis KIM ppiB. Contains Peptidyl-prolyl cis-trans isomerase%2C cyclophilin type (Interpro|IPR002130%2C (GO:0006457)) gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0851 YP_0852 YP0852 cysS cysS 923548 924978 + cysteinyl-tRNA synthetase similar to Yersinia pestis CO92 cysS and Yersinia pestis KIM cysS. Contains Cysteinyl-tRNA synthetase%2C class Ia (Interpro|IPR002308%2C (GO:0006423)) gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0852 YP_0853 YP0853 tnp_8 tnp_8 925274 925783 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase IS200-like (Interpro|IPR002686). gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0853 YP_0854 YP0854 YP_0854 925930 926142 - hypothetical protein similar to Yersinia pestis CO92 YPO2825 and Yersinia pestis KIM y1109 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0854 YP_0855 YP0855 folD folD 926157 927023 - putative FolD bifunctional protein similar to Yersinia pestis CO92 folD and Yersinia pestis KIM folD. Contains Tetrahydrofolate dehydrogenase/cyclohydrolase (Interpro|IPR000672%2C (GO:0009396)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0855 YP_0856 YP0856 YP_0856 927244 927402 - hypothetical protein no significant database match found gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0856 YP_0857 YP0857 YP_0857 927378 927560 - putative regulatory protein similar to Yersinia pestis CO92 YPO2823 gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0857 YP_0858 YP0858 YP_0858 927819 928019 - hypothetical protein similar to Yersinia pestis CO92 YPO2822 gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0858 YP_0859 YP0859 YP_0859 928133 928780 - hypothetical protein Best Blastp hit %3D gi|22125015|ref|NP_668438.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|21957862|gb|AAM84689.1|AE013714_5 (AE013714) hypothetical [Yersinia pestis KIM]%2C(len:165 aa) gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0859 YP_0860 YP0860 YP_0860 928765 929103 - hypothetical protein similar to Yersinia pestis CO92 YPO2820 gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0860 YP_0861 YP0861 int1 int1 929186 929485 - similar to Yersinia pestis CO92 YPO2819 gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0861 YP_0862 YP0862 YP_0862 929637 929882 + hypothetical protein no significant database match found gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0862 YP_0863 YP0863 YP_0863 929822 930055 + hypothetical protein similar to Yersinia pestis CO92 YPO2818 gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0863 YP_0864 YP0864 pgsA1 pgsA1 930282 930884 + putative CDP-alcohol phosphatidyltransferase similar to Yersinia pestis CO92 YPO2817 and Yersinia pestis KIM y1115. Contains CDP-alcohol phosphatidyltransferase (Interpro|IPR000462%2C (GO:0008654)) gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0864 YP_0865 YP0865 cdsA1 cdsA1 930877 931806 + putative phosphatidate cytidylyltransferase similar to Yersinia pestis CO92 YPO2816 and Yersinia pestis KIM y1116. Contains Phosphatidate cytidylyltransferase (Interpro|IPR000374%2C (GO:0016020)) gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0865 YP_0866 YP0866 plsC1 plsC1 931816 932448 + putative acyltransferase similar to Yersinia pestis CO92 YPO2815 and Yersinia pestis KIM y1117. Contains Phospholipid/glycerol acyltransferase (Interpro|IPR002123%2C (GO:0008152)%2C (GO:0008415)) gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0866 YP_0867 YP0867 pldB1 pldB1 932445 934208 + Lysophospholipase similar to Yersinia pestis KIM y1118. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0867 YP_0868 YP0868 pgpB1 pgpB1 934201 935520 + putative dual specificity phosphatase similar to Yersinia pestis CO92 YPO2813 and Yersinia pestis KIM y1119. Contains PA-phosphatase related phosphoesterase (Interpro|IPR000326). Contains Dual specificity protein phosphatase (Interpro|IPR000340%2C (GO:0006470)%2C (GO:0008138)). Contains Tyrosine specific protein phosphatase and dual specificity protein phosphatase (Interpro|IPR000387%2C (GO:0006470)). Contains Na+/K+ ATPase%2C beta subunit (Interpro|IPR000402%2C (GO:0016020)). Contains Protein tyrosine phosphatase%2C catalytic region (Interpro|IPR003595%2C (GO:0004725)) gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0868 YP_0869 YP0869 YP_0869 935502 935903 + putative Zn-dependent hydrolases of the beta-lactamase fold similar to Yersinia pestis KIM y1120 gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0869 YP_0870 YP0870 YP_0870 936000 936305 + putative membrane protein similar to Yersinia pestis CO92 YPO2811 gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0870 YP_0871 YP0871 dnaC_9 dnaC_9 936672 937454 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0871 YP_0872 YP0872 YP_0872 937451 938473 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0872 YP_0873 YP0873 fabF1 fabF1 938560 938861 - similar to C-terminal of gi|25286613|pir||E98212%2C 3-oxoacyl-acyl carrier protein synthase II PA1373%2C Agrobacterium tumefaciens (strain C58%2C Cereon)%3B this CDS has been disrupted by IS100 element and the N-termianl located in 1255568 to 1256596. The rearrangement has been confirmed. pseudogene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0873 YP_0874 YP0874 YP_0874 939107 939295 + putative membrane protein similar to Yersinia pestis CO92 YPO1429 gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0874 YP_0875 YP0875 fabA fabA 939561 940187 - beta-hydroxydecanoyl thioester dehydrase similar to Yersinia pestis KIM fabA gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0875 YP_0876 YP0876 lonB lonB 940148 941899 - putative Lon protease similar to Yersinia pestis CO92 YPO1431 and Yersinia pestis KIM y2739. Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)) gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0876 YP_0877 YP0877 YP_0877 942071 942565 + putative dehydrogenase similar to Yersinia pestis KIM y2737 gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0877 YP_0878 YP0878 tnp_9 tnp_9 942734 943243 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase IS200-like (Interpro|IPR002686). gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0878 YP_0879 YP0879 YP_0879 943393 944397 - putative nucleoid-associated protein similar to Yersinia pestis CO92 YPO1262 and Yersinia pestis KIM y2922 gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0879 YP_0880 YP0880 YP_0880 944542 944802 + hypothetical protein similar to Yersinia pestis CO92 YPO1261 and Yersinia pestis KIM y2923. gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0880 YP_0881 YP0881 YP_0881 944830 946626 + putative membrane protein similar to Yersinia pestis CO92 YPO1260 and Yersinia pestis KIM y2924. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)). Contains Sulfatase (Interpro|IPR000917%2C (GO:0008152)%2C (GO:0008484)) gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0881 YP_0882 YP0882 YP_0882 946857 947240 + similar to Yersinia pestis CO92 YPO1259. pseudogene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0882 YP_0883 YP0883 YP_0883 947597 948745 + hypothetical protein similar to Yersinia pestis CO92 YPO1258 and Yersinia pestis KIM y2928. Contains HNH endonuclease (Interpro|IPR002711%2C (GO:0004519)) gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0883 YP_0884 YP0884 YP_0884 948749 949246 + hypothetical protein similar to Yersinia pestis KIM y2929 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0884 YP_0885 YP0885 YP_0885 949859 950308 + hypothetical protein similar to Yersinia pestis CO92 YPO1255 and Yersinia pestis KIM y2931. gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0885 YP_0886 YP0886 bglA bglA 950434 951870 - 6-phospho-beta-glucosidase similar to Yersinia pestis CO92 bglA and Yersinia pestis KIM bglA. Contains Glycoside hydrolase%2C family 1 (Interpro|IPR001360%2C (GO:0005975)) gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0886 YP_0887 YP0887 rpiR2 rpiR2 952161 952901 - putative LacI-family regulatory protein similar to Yersinia pestis CO92 YPO1253 and Yersinia pestis KIM y2933. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)) gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0887 YP_0888 YP0888 stf stf 953199 953978 - putative bacteriophage tail fiber protein similar to Yersinia pestis CO92 stf and Yersinia pestis KIM y2934 gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0888 YP_0889 YP0889 YP_0889 954075 954422 - putative bacteriophage protein similar to Yersinia pestis CO92 YPO1251 gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0889 YP_0890 YP0890 YP_0890 954419 954679 - putative bacteriophage protein similar to Yersinia pestis CO92 YPO1250a and Yersinia pestis KIM y2936 gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0890 YP_0891 YP0891 xkdT xkdT 954676 955812 - putative bacteriophage protein similar to Yersinia pestis CO92 YPO1250 and Yersinia pestis KIM y2937 gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0891 YP_0892 YP0892 YP_0892 955816 956271 - putative bacteriophage protein GP46 similar to Yersinia pestis CO92 YPO1249 and Yersinia pestis KIM y2938 gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0892 YP_0893 YP0893 YP_0893 956268 956864 - putative bacteriophage (baseplate assembly) protein similar to Yersinia pestis CO92 YPO1248 and Yersinia pestis KIM y2939. Contains Phage baseplate assembly protein V (Interpro|IPR006531) gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0893 YP_0894 YP0894 YP_0894 956880 957935 - putative bacteriophage tail protein similar to Yersinia pestis CO92 YPO1247 and Yersinia pestis KIM y2940. gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0894 YP_0895 YP0895 YP_0895 957932 959338 - putative bacteriophage protein similar to Yersinia pestis CO92 YPO1246 and Yersinia pestis KIM y2941 gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0895 YP_0896 YP0896 YP_0896 959605 961098 - putative bacteriophage coat protein similar to Yersinia pestis CO92 YPO1245 and Yersinia pestis KIM y2942 gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0896 YP_0897 YP0897 YP_0897 961219 961518 - hypothetical protein similar to Yersinia pestis CO92 YPO1244 and Yersinia pestis KIM y2943 gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0897 YP_0898 YP0898 YP_0898 961520 961888 - hypothetical protein similar to Yersinia pestis CO92 YPO1243 and Yersinia pestis KIM y2945 gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0898 YP_0899 YP0899 YP_0899 961910 963418 - putative bacteriophage tail sheath protein similar to Yersinia pestis CO92 YPO1242 and Yersinia pestis KIM y2946 gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0899 YP_0900 YP0900 YP_0900 963415 963609 - putative bacteriophage protein similar to Yersinia pestis CO92 YPO1241 gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0900 YP_0901 YP0901 YP_0901 963614 964261 - hypothetical protein similar to Yersinia pestis KIM y2947. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0901 YP_0902 YP0902 YP_0902 964277 964567 - putative bacteriophage protein similar to Yersinia pestis CO92 YPO1239 and Yersinia pestis KIM y2948 gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0902 YP_0903 YP0903 hfi1 hfi1 965181 965975 - Hydroxypyruvate isomerase similar to Yersinia pestis KIM y2949 gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0903 YP_0904 YP0904 glpR3 glpR3 965951 966766 - putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1237 and Yersinia pestis KIM y2950. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0904 YP_0905 YP0905 araD2 araD2 966846 967475 - putative class II aldolase-family protein similar to Yersinia pestis CO92 YPO1236 and Yersinia pestis KIM y2951. Contains Class II aldolase/adducin%2C N-terminal (Interpro|IPR001303) gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0905 YP_0906 YP0906 YP_0906 967472 968785 - hypothetical protein similar to Yersinia pestis CO92 YPO1235 and Yersinia pestis KIM y2952. gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0906 YP_0907 YP0907 YP_0907 968987 969466 - putative phage antitermination protein Q similar to Yersinia pestis CO92 YPO1234 and Yersinia pestis KIM y2953 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0907 YP_0908 YP0908 lexA2 lexA2 969740 970462 + putative prophage repressor protein similar to Yersinia pestis CO92 YPO1233 and Yersinia pestis KIM y2954. Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)). Contains Peptidase family S24 (Interpro|IPR006197%2C (GO:0006508)%2C (GO:0008236)). Contains Peptidase S24%2C C-terminal (Interpro|IPR006198%2C (GO:0006508)%2C (GO:0008236)) gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0908 YP_0909 YP0909 msgA msgA 970668 970910 + putative stress response protein similar to Yersinia pestis CO92 msgA and Yersinia pestis KIM y2956. Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)) gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0909 YP_0910 YP0910 pla2 pla2 971082 972017 + putative outer membrane-associated protease similar to Yersinia pestis CO92 pla2 and Yersinia pestis KIM ompT. Contains Omptin serine protease (Interpro|IPR000036%2C (GO:0006508)%2C (GO:0009279)) gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0910 YP_0911 YP0911 tar1 tar1 972397 974211 + putative methyl-accepting chemotaxis transmembrane protein similar to Yersinia pestis KIM y2958. Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Cache domain (Interpro|IPR004010). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)) gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0911 YP_0912 YP0912 YP_0912 974285 975313 - putative Zn-dependent hydrolases of the beta-lactamase fold similar to Yersinia pestis CO92 YPO1228 and Yersinia pestis KIM y2960. Contains Beta-lactamase-like (Interpro|IPR001279) gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0912 YP_0913 YP0913 melB1 melB1 975678 977216 + putative transport protein similar to Yersinia pestis CO92 YPO1226 and Yersinia pestis KIM y2961. gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0913 YP_0914 YP0914 YP_0914 977230 977403 + hypothetical protein similar to Yersinia pestis KIM y2962. gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0914 YP_0915 YP0915 ampH ampH 977491 978657 + putative penicillin-binding protein similar to Yersinia pestis CO92 ampH and Yersinia pestis KIM y2964. Contains Beta-lactamase (Interpro|IPR001466) gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0915 YP_0916 YP0916 ompC1 ompC1 979397 980521 - outer membrane protein C%2C porin similar to Yersinia pestis CO92 ompC and Yersinia pestis KIM ompC. Contains Porin%2C Gram-negative type (Interpro|IPR001702%2C (GO:0016020)). Contains Porin%2C E.coli/Salmonella type (Interpro|IPR001897%2C (GO:0016020)). Contains Outer membrane protein P2 (Interpro|IPR003229) gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0916 YP_0917 YP0917 proP10 proP10 981615 982769 + putative membrane protein similar to Yersinia pestis CO92 YPO1221 and Yersinia pestis KIM y2967. Contains Kv channel (Interpro|IPR003968%2C (GO:0008076)) gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0917 YP_0918 YP0918 YP_0918 982793 985485 + similar to Escherichia coli probable sensor protein YojN SW:YOJN_ECOLI (P39838) (890 aa)%2C and to Proteus mirabilis regulator of swarming behavior precursor rsbA TR:O85661 (EMBL:AF071215)(897 aa). There is a frameshift after codon 642. The sequence has been checked and is believed to be correct. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)). Contains Hpt domain (Interpro|IPR002570%2C (GO:0007165)) pseudogene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0918 YP_0919 YP0919 rcsB rcsB 985488 986141 + putative two component response regulator component B similar to Yersinia pestis CO92 rcsB and Yersinia pestis KIM rcsB. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0919 YP_0920 YP0920 rcsC rcsC 986209 989082 - two component sensor kinase/response regulator protein RcsC similar to Yersinia pestis CO92 rcsC and Yersinia pestis KIM rcsC. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0920 YP_0921 YP0921 gyrA gyrA 989270 991945 - DNA gyrase subunit A similar to Yersinia pestis CO92 gyrA and Yersinia pestis KIM gyrA. Contains DNA gyrase/topoisomerase IV%2C subunit A (Interpro|IPR002205%2C (GO:0006265)). Contains DNA gyrase%2C subunit A (Interpro|IPR005743%2C (GO:0006268)). Contains DNA gyrase C-terminal repeat%2C beta-propeller (Interpro|IPR006691) gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0921 YP_0922 YP0922 ubiG ubiG 992207 992935 + 3-demethylubiquinone-9 3-methyltransferase similar to Yersinia pestis CO92 ubiG and Yersinia pestis KIM ubiG. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)) gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0922 YP_0923 YP0923 nrdA nrdA 993429 995717 + ribonucleoside-diphosphate reductase 1 alpha chain similar to Yersinia pestis CO92 nrdA and Yersinia pestis KIM nrdA. Contains Ribonucleotide reductase large subunit (Interpro|IPR000788%2C (GO:0006260)). Contains RecA bacterial DNA recombination protein (Interpro|IPR001553%2C (GO:0008094)). Contains ATP cone domain (Interpro|IPR005144) gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0923 YP_0924 YP0924 nrdB nrdB 995835 997010 + ribonucleoside-diphosphate reductase 1 beta chain similar to Yersinia pestis CO92 nrdB and Yersinia pestis KIM nrdB. Contains Ribonucleotide reductase (Interpro|IPR000358%2C (GO:0009186)) gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0924 YP_0925 YP0925 fdx1 fdx1 997014 997271 + adrenodoxin family ferredoxin similar to Yersinia pestis CO92 YPO1212 and Yersinia pestis KIM y2976. Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains 2Fe-2S ferredoxin (Interpro|IPR006058%2C (GO:0006118)%2C (GO:0008042)) gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0925 YP_0926 YP0926 eco eco 997306 997815 + putative ecotin precursor similar to Yersinia pestis CO92 eco. Contains Ecotin (Interpro|IPR005658) gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0926 YP_0927 YP0927 cinA2 cinA2 997873 999066 - putative nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA similar to Yersinia pestis CO92 YPO1210 and Yersinia pestis KIM y2978. Contains Molybdenum cofactor biosynthesis protein (Interpro|IPR001453%2C (GO:0006777)). Contains Competence-damaged protein (Interpro|IPR003396) gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0927 YP_0929 YP0929 tyrP tyrP 999685 1000893 + tyrosine-specific transport protein similar to Yersinia pestis CO92 tyrP and Yersinia pestis KIM tyrP. Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)). Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid/polyamine transporter%2C family II (Interpro|IPR002422%2C (GO:0016020)) gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0929 YP_0930 YP0930 YP_0930 1001150 1001692 - hypothetical protein similar to Yersinia pestis KIM y2980 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0930 YP_0931 YP0931 katA katA 1002050 1003492 + catalase similar to Yersinia pestis CO92 katA and Yersinia pestis KIM katE. Contains Catalase (Interpro|IPR002226%2C (GO:0006979)) gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0931 YP_0932 YP0932 dinG1 dinG1 1003560 1005740 - putative ATP-dependent helicase DinG similar to Yersinia pestis CO92 dinG and Yersinia pestis KIM dinG. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains DEXDc2 (Interpro|IPR006554). Contains Helicase c2 (Interpro|IPR006555) gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0932 YP_0933 YP0933 ompC_1 ompC_1 1006010 1007125 + outer membrane protein C2 similar to Yersinia pestis CO92 ompC2. Contains Porin%2C Gram-negative type (Interpro|IPR001702%2C (GO:0016020)). Contains Porin%2C E.coli/Salmonella type (Interpro|IPR001897%2C (GO:0016020)). Contains Outer membrane protein P2 (Interpro|IPR003229). Contains Porin%2C Gram-negative type (Interpro|IPR001702%2C (GO:0016020)). Contains Porin%2C E.coli/Salmonella type (Interpro|IPR001897%2C (GO:0016020)). Contains Outer membrane protein P2 (Interpro|IPR003229) gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0933 YP_0934 YP0934 rhaT4 rhaT4 1007537 1008427 + putative membrane protein similar to Yersinia pestis CO92 YPO1203 and Yersinia pestis KIM y2985. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0934 YP_0935 YP0935 YP_0935 1008537 1008755 + hypothetical protein similar to Yersinia pestis KIM y2986. gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0935 YP_0936 YP0936 adiA adiA 1008873 1011179 - putative amino acid decarboxylase similar to Yersinia pestis CO92 YPO1201 and Yersinia pestis KIM adiA. Contains Orn/Lys/Arg decarboxylase%2C family 1 (Interpro|IPR000310%2C (GO:0003824)) gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0936 YP_0937 YP0937 potE1 potE1 1011249 1012583 - putative amino acid permease similar to Yersinia pestis CO92 YPO1200 and Yersinia pestis KIM y2988. Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)). Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0937 YP_0938 YP0938 proW1 proW1 1013067 1013903 - putative ABC transport integral membrane subunit similar to Yersinia pestis CO92 YPO1199 and Yersinia pestis KIM y2990. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0938 YP_0939 YP0939 proV1 proV1 1013900 1014838 - putative ABC transport ATP-binding subunit similar to Yersinia pestis CO92 YPO1198 and Yersinia pestis KIM y2991. Contains CBS domain (Interpro|IPR000644). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Mitochondrial substrate carrier (Interpro|IPR001993%2C (GO:0006810)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0939 YP_0940 YP0940 proW2 proW2 1014835 1015971 - putative ABC transport integral membrane subunit similar to Yersinia pestis CO92 YPO1197 and Yersinia pestis KIM y2992. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0940 YP_0941 YP0941 YP_0941 1016232 1017164 - similar to gi|16761108|ref|NP_456725.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhi](305 aa)%3B and similar to gi|16765495|ref|NP_461110.1| (NC_003197) putative ABC superfamily (bind_prot) transport protein (possibly glycine betaine choline transport for osmoprotection) [Salmonella typhimurium LT2]. There is a stop codon at position 156. The sequence has been checked and is believed to be correct. pseudogene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0941 YP_0942 YP0942 sseA sseA 1017900 1018754 + putative sulfurtransferase similar to Yersinia pestis CO92 YPO1194 and Yersinia pestis KIM sseA. Contains Thiosulfate sulfurtransferase (Interpro|IPR001307%2C (GO:0008272)). Contains Rhodanese-like (Interpro|IPR001763) gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0942 YP_0943 YP0943 dcd1 dcd1 1018909 1020324 - putative pyridoxal-dependent decarboxylase similar to Yersinia pestis CO92 YPO1193 and Yersinia pestis KIM dcd. Contains Alkaline phosphatase (Interpro|IPR001952%2C (GO:0008152)%2C (GO:0016302)). Contains Pyridoxal-dependent decarboxylase (Interpro|IPR002129%2C (GO:0006520)%2C (GO:0016831)). Contains DeoxyUTP pyrophosphatase (Interpro|IPR001428%2C (GO:0006399)). Contains dCTP Deaminase (Interpro|IPR003232) gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0943 YP_0944 YP0944 YP_0944 1020348 1021205 - hypothetical protein similar to Yersinia pestis CO92 YPO1192 and Yersinia pestis KIM y2997. gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0944 YP_0945 YP0945 livF1 livF1 1021320 1022081 - putative ABC transport ATP-binding subunit similar to Yersinia pestis CO92 YPO1191 and Yersinia pestis KIM livF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0945 YP_0946 YP0946 livG1 livG1 1022112 1022948 - putative ABC transport ATP-binding subunit similar to Yersinia pestis CO92 YPO1190 and Yersinia pestis KIM y2999. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)) gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0946 YP_0947 YP0947 livM1 livM1 1022945 1024021 - putative Branched-chain amino acid transport system%2C permease component similar to Yersinia pestis CO92 YPO1189. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0947 YP_0948 YP0948 livM2 livM2 1024021 1025637 - putative Branched-chain amino acid transport system%2C permease component similar to Yersinia pestis CO92 YPO1188 and Yersinia pestis KIM y3001. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0948 YP_0949 YP0949 livK1 livK1 1025746 1027044 - putative substrate-binding periplasmic transport protein similar to Yersinia pestis CO92 YPO1187 and Yersinia pestis KIM y3002. Contains Leu/Ile/Val-binding protein family (Interpro|IPR000709%2C (GO:0030288)) gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0949 YP_0950 YP0950 YP_0950 1027449 1027922 - hypothetical protein similar to Yersinia pestis CO92 YPO1186 and Yersinia pestis KIM y3003 gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0950 YP_0951 YP0951 YP_0951 1028168 1029055 - putative ABC transport membrane permease similar to Yersinia pestis CO92 YPO1185 and Yersinia pestis KIM y3004. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0951 YP_0952 YP0952 YP_0952 1029052 1029912 - putative ABC transport membrane permease similar to Yersinia pestis CO92 YPO1184 and Yersinia pestis KIM y3005. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0952 YP_0953 YP0953 phnD phnD 1030015 1030944 - putative substrate-binding periplasmic transport protein similar to Yersinia pestis CO92 YPO1183 and Yersinia pestis KIM y3006. Contains DNA topoisomerase%2C type II (Interpro|IPR002815%2C (GO:0006265)) gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0953 YP_0954 YP0954 phnC phnC 1030981 1031853 - ATP-binding component of phosphonate transport similar to Yersinia pestis KIM phnC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0954 YP_0955 YP0955 YP_0955 1032025 1032348 - putative membrane protein similar to Yersinia pestis CO92 YPO1181. gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0955 YP_0956 YP0956 YP_0956 1032458 1033561 - hypothetical protein similar to Yersinia pestis CO92 YPO1180 and Yersinia pestis KIM y3008 gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0956 YP_0957 YP0957 YP_0957 1033703 1033873 - hypothetical protein similar to Yersinia pestis KIM y3009 gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0957 YP_0958 YP0958 YP_0958 1033862 1034215 + hypothetical protein similar to Yersinia pestis CO92 YPO1179 and Yersinia pestis KIM y3010. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains HNH nuclease (Interpro|IPR003615) gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0958 YP_0959 YP0959 cyaB cyaB 1034241 1034780 - adenylate cyclase 2 similar to Yersinia pestis CO92 cyaB and Yersinia pestis KIM y3011. Contains Adenylate cyclase (Interpro|IPR002783) gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0959 YP_0960 YP0960 dld dld 1034987 1036702 + D-lactate dehydrogenase similar to Yersinia pestis CO92 dld and Yersinia pestis KIM dld. Contains Immunoglobulin/major histocompatibility complex (Interpro|IPR003006). Contains FAD linked oxidase%2C N-terminal (Interpro|IPR006094%2C (GO:0008246)) gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0960 YP_0961 YP0961 pbpG pbpG 1036823 1037758 - penicillin-binding protein 7 precursor similar to Yersinia pestis CO92 pbpG and Yersinia pestis KIM pbpG. Contains D-alanyl-D-alanine carboxypeptidase 1%2C S11 family (Interpro|IPR001967%2C (GO:0006508)) gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0961 YP_0962 YP0962 YP_0962 1038097 1038276 + hypothetical protein similar to Yersinia pestis KIM y3014 gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0962 YP_0963 YP0963 YP_0963 1038350 1039294 - putative TIM-barrel enzymes similar to Yersinia pestis CO92 YPO1175 and Yersinia pestis KIM y3015. Contains Protein of unknown function UPF0034 (Interpro|IPR001269%2C (GO:0005554)). Contains FMN/related compound-binding core (Interpro|IPR003009)%3B possibly dehydrogenases%2C nifR3 family gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0963 YP_0964 YP0964 YP_0964 1039588 1040517 - hypothetical protein similar to Yersinia pestis CO92 YPO1174 and Yersinia pestis KIM y3016 gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0964 YP_0965 YP0965 tnp_10 tnp_10 1040927 1041436 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase IS200-like (Interpro|IPR002686). gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0965 YP_0966 YP0966 rhlE rhlE 1041596 1042513 - len: 305 aa%3B Best Blastp hit %3D gi|16611843|gb|AAL27386.1|AF426171_17 (AF426171) RhlE [Yersinia pestis]%2C(len:421 aa)%3B this CDS seems to lose the N-terminal 146 residues. Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)). Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)) pseudogene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0966 YP_0967 YP0967 YP_0967 1042515 1043105 - len: 196 aa%3B Best Blastp hit %3D gi|15808754|gb|AAL08483.1| (AF326777) IS1328 transposase [Shigella flexneri 2a]%2C(len:334 aa). pseudogene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0967 YP_0968 YP0968 YP_0968 1043197 1044405 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0968 YP_0969 YP0969 YP_0969 1044616 1044990 - hypothetical protein Best Blastp hit %3D gi|15610648|ref|NP_218029.1| (NC_000962) PE_PGRS [Mycobacterium tuberculosis H37Rv]%2C gi|7441215|pir||B70807 hypothetical glycine-rich protein Rv3512 - Mycobacterium tuberculosis (strain H37RV)%2C gi|2924449|emb|CAA17749.1| (AL022022) PE_PGRS [Mycobacterium tuberculosis H37Rv]%2C(len:1079 aa)%3B . Contains Eggshell protein (Interpro|IPR002952) gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0969 YP_0970 YP0970 dnaJ1 dnaJ1 1045011 1045565 - Molecular chaperones (containing C-terminal Zn finger domain) Best Blastp hit %3D gi|15842940|ref|NP_337977.1| (NC_002755) PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]%2C gi|13883276|gb|AAK47791.1| (AE007152) PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]%2C(len:1507 aa) gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0970 YP_0971 YP0971 YP_0971 1045714 1045914 - hypothetical protein no significant database match found gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0971 YP_0972 YP0972 YP_0972 1046443 1046676 - putative transposase Best Blastp hit %3D gi|12084980|ref|NP_073225.1| (NC_002638) transposase of IS630 [Salmonella enterica subsp. enterica serovar Choleraesuis]%2C gi|17233422|ref|NP_490532.1| (NC_003277) putative integrase protein [Salmonella typhimurium LT2]%2C gi|532964|dbj|BAA01531.1| (D10689) M5 protein [Salmonella choleraesuis]%2C gi|12060350|dbj|BAB20556.1| (AB040415) transposase of IS630 [Salmonella enterica subsp. enterica serovar Choleraesuis]%2C gi|16445243|gb|AAL23461.1| (AE006471) putative integrase protein [Salmonella typhimurium LT2]%2C(len:345 aa) gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0972 YP_0973 YP0973 srmB1 srmB1 1047128 1048540 - Superfamily II DNA and RNA helicases Best Blastp hit %3D gi|16611843|gb|AAL27386.1|AF426171_17 (AF426171) RhlE [Yersinia pestis]%2C(len:421 aa)%3B. Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)). Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0973 YP_0974 YP0974 acrR3 acrR3 1048874 1049584 + Transcriptional regulator Best Blastp hit %3D gi|16611842|gb|AAL27385.1|AF426171_16 (AF426171) putative transcription regulator YbiH [Yersinia pestis]%2C(len:236 aa)%3B. Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0974 YP_0975 YP0975 acrA4 acrA4 1049636 1050622 + Membrane-fusion protein Best Blastp hit %3D gi|20455413|sp|Q93AA7|Y873_YERPE Hypothetical membrane protein Ecs0873%2C gi|16611841|gb|AAL27384.1|AF426171_15 (AF426171) putative membrane protein [Yersinia pestis]%2C(len:328 aa)%3B. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0975 YP_0976 YP0976 ccmA2 ccmA2 1050636 1052378 + ABC-type multidrug transport system%2C ATPase component Best Blastp hit %3D gi|16611840|gb|AAL27383.1|AF426171_14 (AF426171) putative ABC transporter ElsE [Yersinia pestis]%2C(len:580 aa)%3B. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0976 YP_0977 YP0977 YP_0977 1052290 1053558 + ABC-type multidrug transport system%2C permease component Best Blastp hit %3D gi|16611839|gb|AAL27382.1|AF426171_13 (AF426171) ElsD [Yersinia pestis]%2C(len:419 aa)%3B. Contains ABC transporter%2C family 2 (Interpro|IPR000412%2C (GO:0016020)) gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0977 YP_0978 YP0978 YP_0978 1053571 1054677 + ABC-type multidrug transport system%2C permease component Best Blastp hit %3D gi|16611837|gb|AAL27380.1|AF426171_11 (AF426171) YbhR [Yersinia pestis]%2C(len:368 aa)%3B. Contains ABC transporter%2C family 2 (Interpro|IPR000412%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0978 YP_0979 YP0979 YP_0979 1054716 1055045 - hypothetical protein Best Blastp hit %3D gi|16611836|gb|AAL27379.1|AF426171_10 (AF426171) DffD [Yersinia pestis]%2C(len:109 aa) gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0979 YP_0980 YP0980 YP_0980 1055053 1055280 - Coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases no significant database match found gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0980 YP_0981 YP0981 lysR4 lysR4 1055835 1056746 + Transcriptional regulator Best Blastp hit %3D gi|16611834|gb|AAL27377.1|AF426171_8 (AF426171) putative transcriptional regulator [Yersinia pestis]%2C(len:303 aa)%3B. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0981 YP_0982 YP0982 nemA1 nemA1 1056747 1057856 - NADH:flavin oxidoreductases%2C Old Yellow Enzyme family Best Blastp hit %3D gi|16611833|gb|AAL27376.1|AF426171_7 (AF426171) morphinone reductase MorB [Yersinia pestis]%2C(len:369 aa)%3B. Contains NADH:flavin oxidoreductase/NADH oxidase (Interpro|IPR001155%2C (GO:0006118)%2C (GO:0008246)) gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0982 YP_0983 YP0983 atoC1 atoC1 1058204 1059496 - Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains Best Blastp hit %3D gi|16611832|gb|AAL27375.1|AF426171_6 (AF426171) HydG [Yersinia pestis]%2C(len:463 aa)%3B. Contains CbxX/CfqX superfamily (Interpro|IPR000641%2C (GO:0005524)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Sigma-54 factor interaction domain (Interpro|IPR002078%2C (GO:0000160)%2C (GO:0003677)%2C (GO:0006355)). Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0983 YP_0984 YP0984 baeS2 baeS2 1059555 1061378 - Signal transduction histidine kinase Best Blastp hit %3D gi|16611830|gb|AAL27373.1|AF426171_4 (AF426171) HydH [Yersinia pestis]%2C(len:607 aa)%3B. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains PAS-associated C-terminal domain (Interpro|IPR000700%2C (GO:0000160)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0984 YP_0985 YP0985 YP_0985 1061727 1062200 + hypothetical protein Best Blastp hit %3D gi|16611829|gb|AAL27372.1|AF426171_3 (AF426171) DffA [Yersinia pestis]%2C(len:157 aa) gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0985 YP_0986 YP0986 xapB xapB 1062288 1064302 - similar to >gi|16130332|ref|NP_416901.1| xanthosine permease [Escherichia coli K12] (418 aa)%3B disrupted by IS1541 pseudogene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0986 YP_0987 YP0987 tnp_11 tnp_11 1063006 1063464 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp. Contains Transposase IS200-like (Interpro|IPR002686). gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0987 YP_0988 YP0988 xapA xapA 1064393 1065256 - xanthosine phosphorylase similar to Yersinia pestis CO92 xapA. Contains Serine protease%2C trypsin family (Interpro|IPR001254%2C (GO:0006508)). Contains Purine (and other) phosphorylase%2C family 2 (Interpro|IPR001369%2C (GO:0004645)) gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0988 YP_0989 YP0989 rhaT5 rhaT5 1065569 1066450 + putative membrane protein similar to Yersinia pestis CO92 YPO1170. Contains Eukaryotic thiol (cysteine) protease (Interpro|IPR000169%2C (GO:0006508)). Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0989 YP_0990 YP0990 lysR5 lysR5 1066488 1067381 - putative LysR-family regulatory protein similar to Yersinia pestis CO92 YPO1169. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0990 YP_0991 YP0991 betT1 betT1 1067613 1069814 - high-affinity choline transport protein similar to Yersinia pestis CO92 betT. Contains BCCT transporter (Interpro|IPR000060%2C (GO:0016020)). Contains Cytochrome c-type biogenesis protein CcmB (Interpro|IPR003544%2C (GO:0017004)) gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0991 YP_0992 YP0992 betI betI 1070002 1070622 + TetR-family regulatory protein similar to Yersinia pestis CO92 betI. Contains Basic helix-loop-helix dimerization domain bHLH (Interpro|IPR001092). Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0992 YP_0993 YP0993 betB betB 1070680 1072152 + betaine aldehyde dehydrogenase similar to Yersinia pestis CO92 betB. Contains Ribosomal protein L11 (Interpro|IPR000911%2C (GO:0006412)). Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0993 YP_0994 YP0994 betA betA 1072175 1073878 + choline dehydrogenase similar to Yersinia pestis CO92 betA. Contains Glucose-methanol-choline oxidoreductase (Interpro|IPR000172%2C (GO:0006118)%2C (GO:0008246)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0994 YP_0995 YP0995 tnp_12 tnp_12 1074107 1074616 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase IS200-like (Interpro|IPR002686).). gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0995 YP_0996 YP0996 YP_0996 1074800 1075510 - putative membrane protein similar to Yersinia pestis CO92 YPO1163 and Yersinia pestis KIM y3018. Contains Protein of unknown function UPF0005 (Interpro|IPR006214) gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0996 YP_0997 YP0997 moaE moaE 1075653 1076111 - molybdopterin [mpt] converting factor%2C subunit 2 similar to Yersinia pestis CO92 moaE and Yersinia pestis KIM moaE. Contains Molybdopterin biosynthesis MoaE (Interpro|IPR003448%2C (GO:0006777)) gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0997 YP_0998 YP0998 moaD moaD 1076108 1076353 - molybdopterin [mpt] converting factor%2C subunit 1 similar to Yersinia pestis CO92 moaD and Yersinia pestis KIM moaD. Contains ThiamineS (Interpro|IPR003749) gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0998 YP_0999 YP0999 moaC moaC 1076350 1076832 - molybdenum cofactor biosynthesis protein C similar to Yersinia pestis CO92 moaC and Yersinia pestis KIM moaC. Contains Molybdopterin cofactor biosynthesis protein MoaC (Interpro|IPR002820%2C (GO:0006777)) gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=YP_0999 YP_1000 YP1000 moaA moaA 1077052 1078077 - molybdenum cofactor biosynthesis protein A similar to Yersinia pestis CO92 moaA and Yersinia pestis KIM moaA. Contains MoaA/nifB/pqqE family (Interpro|IPR000385%2C (GO:0003824)). Contains Beta and gamma crystallin (Interpro|IPR001064). Contains Elongator protein 3/MiaB/NifB (Interpro|IPR006638) gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1000 YP_1001 YP1001 YP_1001 1078564 1079487 + hypothetical protein similar to Yersinia pestis CO92 YPO1158 and Yersinia pestis KIM y3024. Contains Protein of unknown function UPF0052 (Interpro|IPR002882) gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1001 YP_1002 YP1002 YP_1002 1079618 1079863 - hypothetical protein similar to Yersinia pestis CO92 YPO1157 and Yersinia pestis KIM y3025 gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1002 YP_1003 YP1003 uvrB uvrB 1080155 1082170 - excinuclease ABC subunit B similar to Yersinia pestis CO92 uvrB and Yersinia pestis KIM uvrB. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains UvrB/UvrC protein (Interpro|IPR001943%2C (GO:0006289)). Contains Excinuclease ABC%2C B subunit (Interpro|IPR004807%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009380)%2C (GO:0009381)) gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1003 YP_1005 YP1005 livF2 livF2 1083261 1083971 + putative amino acid transporter similar to Yersinia pestis CO92 YPO1155 and Yersinia pestis KIM y3027. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1005 YP_1006 YP1006 bioD1 bioD1 1084123 1084860 - dethiobiotin synthetase similar to Yersinia pestis KIM bioD. Contains Cobyrinic acid a%2Cc-diamide synthase (Interpro|IPR002586%2C (GO:0009236)%2C (GO:0042242)). Contains Dethiobiotin synthase (Interpro|IPR004472%2C (GO:0009102)) gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1006 YP_1007 YP1007 bioC bioC 1084838 1085641 - biotin synthesis protein BioC similar to Yersinia pestis CO92 bioC and Yersinia pestis KIM bioC. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)) gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1007 YP_1008 YP1008 bioF bioF 1085625 1086776 - 8-amino-7-oxononanoate synthase similar to Yersinia pestis CO92 bioF and Yersinia pestis KIM bioF. Contains Aminotransferase%2C class-II (Interpro|IPR001917%2C (GO:0008152)%2C (GO:0016740)). Contains 8-amino-7-oxononanoate synthase (Interpro|IPR004723%2C (GO:0009102)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1008 YP_1009 YP1009 bioB bioB 1086776 1087813 - biotin synthase similar to Yersinia pestis CO92 bioB and Yersinia pestis KIM bioB. Contains Biotin synthase (Interpro|IPR002684%2C (GO:0009102)). Contains Elongator protein 3/MiaB/NifB (Interpro|IPR006638) gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1009 YP_1010 YP1010 bioA bioA 1087912 1089192 + 7%2C8-diaminopelargonic acid synthetase similar to Yersinia pestis KIM bioA. Contains Aminotransferase class-III (Interpro|IPR005814%2C (GO:0008483)). Contains Adenosylmethionine--8-amino-7-oxononanoate aminotransferase (Interpro|IPR005815%2C (GO:0009102)) gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1010 YP_1011 YP1011 YP_1011 1089377 1090381 - 3-carboxymuconate cyclase similar to Yersinia pestis CO92 YPO1149 and Yersinia pestis KIM y3033 gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1011 YP_1012 YP1012 cof2 cof2 1090672 1091493 + putative hydrolases of the HAD superfamily similar to Yersinia pestis CO92 YPO1148 and Yersinia pestis KIM y3034. Contains Cof protein (Interpro|IPR000150%2C (GO:0005554)). Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IIB (Interpro|IPR006379) gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1012 YP_1013 YP1013 modC modC 1091549 1092628 - molybdenum transport ATP-binding protein ModC similar to Yersinia pestis CO92 modC and Yersinia pestis KIM modC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Molybdenum-pterin binding domain (Interpro|IPR004606%2C (GO:0030151)). Contains TOBE domain (Interpro|IPR005116) gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1013 YP_1014 YP1014 modB modB 1092622 1093317 - molybdenum transport system permease protein ModB similar to Yersinia pestis CO92 modB and Yersinia pestis KIM modB. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Molybdate porter (Interpro|IPR006229) gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1014 YP_1015 YP1015 modA2 modA2 1093317 1094096 - molybdate-binding periplasmic protein precursor similar to Yersinia pestis CO92 modA and Yersinia pestis KIM modA. Contains Molybdenum ABC transporter%2C periplasmic binding protein (Interpro|IPR005950%2C (GO:0030288)) gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1015 YP_1016 YP1016 YP_1016 1094331 1094483 - putative membrane protein similar to Yersinia pestis CO92 YPO1144 and Yersinia pestis KIM y3038 gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1016 YP_1017 YP1017 modE modE 1094766 1095557 + molybdenum transport protein ModE similar to Yersinia pestis CO92 modE. Contains Molybdenum-binding protein%2C N-terminal (Interpro|IPR003725%2C (GO:0015689)). Contains Molybdenum-pterin binding domain (Interpro|IPR004606%2C (GO:0030151)). Contains TOBE domain (Interpro|IPR005116) gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1017 YP_1018 YP1018 modF modF 1095601 1097157 + putative molybdenum transport ATP-binding protein modF similar to Yersinia pestis CO92 modF and Yersinia pestis KIM modF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains GTP1/OBG family (Interpro|IPR006073) gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1018 YP_1019 YP1019 YP_1019 1097374 1098192 + putative membrane protein similar to Yersinia pestis CO92 YPO1140 and Yersinia pestis KIM y3042. Contains Abortive infection protein (Interpro|IPR003675) gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1019 YP_1020 YP1020 galE galE 1098552 1099568 + UDP-glucose 4-epimerase similar to Yersinia pestis CO92 galE and Yersinia pestis KIM galE. Contains NAD-dependent epimerase/dehydratase (Interpro|IPR001509%2C (GO:0009225)). Contains UDP-glucose 4-epimerase (Interpro|IPR005886%2C (GO:0006012)) gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1020 YP_1021 YP1021 galT galT 1099578 1100630 + galactose-1-phosphate uridylyltransferase similar to Yersinia pestis CO92 galT and Yersinia pestis KIM galT. Contains Galactose-1-phosphate uridyl transferase%2C class I (Interpro|IPR001937%2C (GO:0006012)). Contains Galactose-1-phosphate uridyl transferase N terminal (Interpro|IPR005849%2C (GO:0006012)). Contains Galactose-1-phosphate uridyl transferase C terminal (Interpro|IPR005850%2C (GO:0006012)). Contains Galactose-1-phosphate uridyl transferase 1 (Interpro|IPR005851%2C (GO:0006012)) gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1021 YP_1022 YP1022 galK galK 1100627 1101778 + galactokinase similar to Yersinia pestis CO92 galK and Yersinia pestis KIM galK. Contains Galactokinase (Interpro|IPR000705%2C (GO:0006012)). Contains Galactokinase/homoserine kinase (Interpro|IPR001174%2C (GO:0016301)). Contains GHMP kinase%2C ATP-binding region (Interpro|IPR006203%2C (GO:0005524)). Contains GHMP kinase (Interpro|IPR006204). Contains Mevalonate and galactokinase (Interpro|IPR006206%2C (GO:0016773)) gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1022 YP_1023 YP1023 galM galM 1101772 1102841 + similar to gi|16764137|ref|NP_459752.1| (NC_003197) galactose-1-epimerase (mutarotase) [Salmonella typhimurium LT2] (len:346 aa). There is a frameshift after codon 39. The sequence has been checked and is believed to be correct. pseudogene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1023 YP_1024 YP1024 psiF psiF 1103134 1103469 + putative starvation-inducible protein similar to Yersinia pestis CO92 psiF and Yersinia pestis KIM gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1024 YP_1025 YP1025 gpmA gpmA 1103732 1104568 + phosphoglycerate mutase 1 similar to Yersinia pestis CO92 gpmA and Yersinia pestis KIM gpmA. Contains Phosphoglycerate/bisphosphoglycerate mutase (Interpro|IPR001345%2C (GO:0008152)). Contains Phosphoglycerate mutase 1 (Interpro|IPR005952%2C (GO:0006096)%2C (GO:0016868)) gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1025 YP_1026 YP1026 aroG aroG 1104750 1105802 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase similar to Yersinia pestis KIM aroG. Contains DAHP synthetase I/KDSA superfamily (Interpro|IPR006218%2C (GO:0009058)%2C (GO:0016228)). Contains Phospho-2-dehydro-3-deoxyheptonate aldolase%2C subtype 1 (Interpro|IPR006219%2C (GO:0009073)) gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1026 YP_1027 YP1027 czcD czcD 1106251 1107189 + putative cation transport protein similar to Yersinia pestis CO92 YPO1129 and Yersinia pestis KIM y3050. Contains Corticotropin-releasing factor%2C CRF (Interpro|IPR000187%2C (GO:0005576)). Contains Cation efflux protein (Interpro|IPR002524%2C (GO:0006812)%2C (GO:0016020)) gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1027 YP_1028 YP1028 pnuC pnuC 1107304 1108029 - intergral membrane NMN transport protein PnuC similar to Yersinia pestis CO92 pnuC and Yersinia pestis KIM pnuC. Contains Nicotinamide mononucleotide transporter PnuC (Interpro|IPR006419). Contains Nicotinamide mononucleotide transporter (Interpro|IPR007056) gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1028 YP_1029 YP1029 nadA nadA 1108151 1109212 - quinolinate synthetase A similar to Yersinia pestis CO92 nadA and Yersinia pestis KIM nadA. Contains Quinolinate synthetase A (Interpro|IPR003473%2C (GO:0009435)) gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1029 YP_1030 YP1030 YP_1030 1110048 1110857 - hypothetical protein similar to Yersinia pestis KIM y3053. Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains TPR repeat (Interpro|IPR001440) gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1030 YP_1031 YP1031 pal pal 1110867 1111373 - peptidoglycan-associated lipoprotein Pal similar to Yersinia pestis CO92 pal and Yersinia pestis KIM pal. Contains MotY protein (Interpro|IPR001035%2C (GO:0001539)%2C (GO:0009288)). Contains Bacterial outer membrane protein (Interpro|IPR006664). Contains OmpA/MotB domain (Interpro|IPR006665). Contains OmpA-like domain (Interpro|IPR006690) gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1031 YP_1032 YP1032 tolB tolB 1111424 1112716 - TolB colicin import protein similar to Yersinia pestis CO92 tolB and Yersinia pestis KIM tolB gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1032 YP_1033 YP1033 tolA tolA 1112836 1114041 - TolA colicin import membrane protein similar to Yersinia pestis CO92 tolA and Yersinia pestis KIM tolA. Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains Tropomyosin (Interpro|IPR000533) gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1033 YP_1034 YP1034 tolR tolR 1114138 1114566 - TolR colicin import membrane protein similar to Yersinia pestis CO92 tolR and Yersinia pestis KIM tolR. Contains Biopolymer transport protein ExbD/TolR (Interpro|IPR003400%2C (GO:0016020)) gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1034 YP_1035 YP1035 tolQ tolQ 1114579 1115265 - TolQ colicin import protein similar to Yersinia pestis CO92 tolQ and Yersinia pestis KIM tolQ. Contains MotA/TolQ/ExbB proton channel (Interpro|IPR002898%2C (GO:0006810)%2C (GO:0016020)) gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1035 YP_1036 YP1036 fcbC2 fcbC2 1115265 1115666 - putative thioesterase similar to Yersinia pestis CO92 YPO1120 and Yersinia pestis KIM y3059. Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824)). Contains 4-hydroxybenzoyl-CoA thioesterase (Interpro|IPR006684%2C (GO:0016787)) gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1036 YP_1037 YP1037 YP_1037 1115798 1116058 - conserved hypothetical protein%2C predicted membrane protein Best Blastp hit %3D gi|16121419|ref|NP_404732.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]%2C gi|22126936|ref|NP_670359.1| (NC_004088) hypothetical protein [Yersinia pestis KIM]%2C gi|15979186|emb|CAC89962.1| (AJ414146) conserved hypothetical protein [Yersinia pestis]%2C gi|21959976|gb|AAM86610.1|AE013907_4 (AE013907) hypothetical protein [Yersinia pestis KIM]%2C(len:110 aa) gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1037 YP_1038 YP1038 cydB cydB 1116222 1117361 - cytochrome D ubiquinol oxidase subunit II similar to Yersinia pestis CO92 cydB and Yersinia pestis KIM cydB. Contains Cytochrome bd ubiquinol oxidase%2C subunit II (Interpro|IPR003317%2C (GO:0016020)) gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1038 YP_1039 YP1039 cydA cydA 1117376 1118944 - cytochrome D ubiquinol oxidase subunit I similar to Yersinia pestis CO92 cydA and Yersinia pestis KIM cydA. Contains Cytochrome bd ubiquinol oxidase%2C subunit I (Interpro|IPR002585%2C (GO:0016020)%2C (GO:0016491)) gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1039 YP_1040 YP1040 sucD sucD 1119711 1120583 - succinyl-CoA synthetase alpha chain similar to Yersinia pestis CO92 sucD and Yersinia pestis KIM sucD. Contains CoA Binding Domain (Interpro|IPR003781). Contains Succinyl-CoA ligase%2C alpha subunit (Interpro|IPR005810%2C (GO:0008152)). Contains ATP-citrate lyase/succinyl-CoA ligase (Interpro|IPR005811%2C (GO:0008152)) gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1040 YP_1041 YP1041 sucC sucC 1120583 1121749 - succinyl-CoA synthetase beta chain similar to Yersinia pestis CO92 sucC and Yersinia pestis KIM sucC. Contains ATP-dependent carboxylate-amine ligase-like%2C ATP-grasp (Interpro|IPR003135). Contains Succinyl-CoA synthetase%2C beta subunit (Interpro|IPR005809%2C (GO:0008152)). Contains ATP-citrate lyase/succinyl-CoA ligase (Interpro|IPR005811%2C (GO:0008152)) gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1041 YP_1042 YP1042 sucB sucB 1121862 1123085 - dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex similar to Yersinia pestis CO92 sucB and Yersinia pestis KIM sucB. Contains Biotin/lipoyl attachment (Interpro|IPR000089). Contains Catalytic domain of components of various dehydrogenase complexes (Interpro|IPR001078%2C (GO:0008152)%2C (GO:0008415)). Contains 2-oxo acid dehydrogenase%2C acyltransferase component%2C lipoyl-binding (Interpro|IPR003016). Contains E3 binding domain (Interpro|IPR004167%2C (GO:0008415)). Contains Dihydrolipoamide succinyltransferase (Interpro|IPR006255) gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1042 YP_1043 YP1043 sucA sucA 1123115 1125922 - 2-oxoglutarate dehydrogenase E1 component similar to Yersinia pestis CO92 sucA and Yersinia pestis KIM sucA. Contains Dehydrogenase%2C E1 component (Interpro|IPR001017%2C (GO:0008152)%2C (GO:0016624)). Contains Transketolase%2C central region (Interpro|IPR005475) gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1043 YP_1044 YP1044 sdhB sdhB 1126278 1126994 - succinate dehydrogenase iron-sulfur protein similar to Yersinia pestis CO92 sdhB and Yersinia pestis KIM sdhB. Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Succinate dehydrogenase/fumarate reductase iron-sulfur protein (Interpro|IPR004489%2C (GO:0006118)%2C (GO:0016491)) gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1044 YP_1045 YP1045 sdhA sdhA 1127044 1128810 - succinate dehydrogenase flavoprotein subunit similar to Yersinia pestis CO92 sdhA and Yersinia pestis KIM sdhA. Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Fumarate reductase/succinate dehydrogenase%2C FAD-binding site (Interpro|IPR003952%2C (GO:0006118)%2C (GO:0008246)). Contains Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal (Interpro|IPR003953%2C (GO:0006118)%2C (GO:0008246)). Contains Fumarate reductase/succinate dehydrogenase flavoprotein%2C C-terminal (Interpro|IPR004112%2C (GO:0008246)%2C (GO:0016491)) gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1045 YP_1046 YP1046 sdhD sdhD 1128811 1129158 - succinate dehydrogenase hydrophobic membrane anchor protein similar to Yersinia pestis CO92 sdhD and Yersinia pestis KIM sdhD gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1046 YP_1047 YP1047 sdhC sdhC 1129152 1129541 - succinate dehydrogenase cytochrome b-556 subunit similar to Yersinia pestis CO92 sdhC and Yersinia pestis KIM sdhC. Contains Succinate dehydrogenase%2C cytochrome b subunit (Interpro|IPR000701%2C (GO:0016020)) gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1047 YP_1048 YP1048 gltA gltA 1130251 1131531 + citrate synthase GltA similar to Yersinia pestis CO92 gltA and Yersinia pestis KIM gltA. Contains Citrate synthase (Interpro|IPR002020%2C (GO:0006099)) gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1048 YP_1049 YP1049 grpE grpE 1131639 1132217 - heat shock protein GrpE similar to Yersinia pestis CO92 YPO1107 and Yersinia pestis KIM grpE. Contains GrpE protein (Interpro|IPR000740) gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1049 YP_1050 YP1050 YP_1050 1132455 1133222 + putative kinase similar to Yersinia pestis CO92 YPO1106 and Yersinia pestis KIM y3074. Contains ATP-NAD kinase (Interpro|IPR002504) gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1050 YP_1051 YP1051 recN recN 1133201 1134970 + DNA repair protein RecN similar to Yersinia pestis CO92 YPO1105 and Yersinia pestis KIM recN. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains SMC protein%2C N terminal (Interpro|IPR003395%2C (GO:0007059)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains DNA repair protein RecN (Interpro|IPR004604%2C (GO:0006310)) gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1051 YP_1052 YP1052 smpA smpA 1135075 1135425 + SmpA / OmlA family similar to Yersinia pestis CO92 YPO1104 and Yersinia pestis KIM smpA. gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1052 YP_1053 YP1053 YP_1053 1135575 1135859 - hypothetical protein similar to Yersinia pestis CO92 YPO1103 and Yersinia pestis KIM y3077. Contains Protein of unknown function UPF0125 (Interpro|IPR005346) gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1053 YP_1054 YP1054 YP_1054 1135852 1136388 - Oligoketide cyclase/lipid transport protein similar to Yersinia pestis KIM y3078. Contains Protein of unknown function UPF0083 (Interpro|IPR005340%2C (GO:0005554)) gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1054 YP_1055 YP1055 smpB smpB 1136435 1136929 + small protein B similar to Yersinia pestis KIM smpB. Contains SmpB protein (Interpro|IPR000037%2C (GO:0006412)) gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1055 YP_1056 YP1056 tnp_13 tnp_13 1137513 1138022 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase IS200-like (Interpro|IPR002686). gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1056 YP_1057 YP1057 intA1 intA1 1138213 1139445 + prophage CP4-57 integrase similar to Yersinia pestis KIM intA. Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)) gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1057 YP_1058 YP1058 YP_1058 1139524 1140612 + putative phage protein similar to Yersinia pestis CO92 YPO1097 and Yersinia pestis KIM y3082 gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1058 YP_1059 YP1059 smc1 smc1 1140663 1142333 + putative phage protein similar to Yersinia pestis CO92 YPO1096 gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1059 YP_1062 YP1062 YP_1062 1143218 1143508 + hypothetical protein similar to Yersinia pestis CO92 YPO1092a and Yersinia pestis KIM y3084. gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1062 YP_1063 YP1063 xerC1 xerC1 1143521 1144417 + putative DNA-binding prophage protein similar to Yersinia pestis CO92 YPO1092 and Yersinia pestis KIM y3085. Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)). Contains Phage integrase%2C N-terminal SAM-like (Interpro|IPR004107%2C (GO:0015074)) gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1063 YP_1064 YP1064 alpA1 alpA1 1144410 1144610 + putative transcriptional regulator Best Blastp hit %3D gi|15803168|ref|NP_289200.1| (NC_002655) putative DNA binding protein [Escherichia coli O157:H7 EDL933]%2C gi|15832767|ref|NP_311540.1| (NC_002695) putative DNA binding protein [Escherichia coli O157:H7]%2C gi|12517078|gb|AAG57758.1|AE005493_11 (AE005493) putative DNA binding protein [Escherichia coli O157:H7 EDL933]%2C gi|13362984|dbj|BAB36936.1| (AP002562) putative DNA binding protein [Escherichia coli O157:H7]%2C(len:68 aa) gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1064 YP_1065 YP1065 YP_1065 1144610 1145152 + putative prophage protein similar to Yersinia pestis CO92 YPO1091 and Yersinia pestis KIM y3086 gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1065 YP_1066 YP1066 YP_1066 1145115 1146104 + hypothetical protein similar to Yersinia pestis KIM y3087 gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1066 YP_1067 YP1067 YP_1067 1146101 1147189 + putative regulatory prophage protein similar to Yersinia pestis CO92 YPO1089 gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1067 YP_1069 YP1069 YP_1069 1147538 1147858 - putative DNA-binding prophage protein similar to Yersinia pestis CO92 YPO1088 and Yersinia pestis KIM y3089. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)) gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1069 YP_1070 YP1070 YP_1070 1147858 1148178 - hypothetical protein similar to gb|ZP_00091378.1| hypothetical protein [Azotobacter vinelandii](111aa)%3B and similar to ref|NP_061700.1|conserved hypothetical protein [Xylella fastidiosa](106 aa). gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1070 YP_1071 YP1071 intA2 intA2 1148590 1151079 + similar to C-terminal 180 residues of many putative prophage integrase%3B disrupted by IS100 element pseudogene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1071 YP_1072 YP1072 YP_1072 1148780 1149802 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1072 YP_1073 YP1073 YP_1073 1149802 1150581 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1073 YP_1074 YP1074 trp1400A trp1400A 1151128 1151391 + IS1400 transposase A similar to Yersinia pestis CO92 trp1400A and Yersinia pestis KIM y1214. Contains Transposase%2C IS3/IS911family (Interpro|IPR002514) gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1074 YP_1075 YP1075 YP_1075 1151474 1151659 + Probable gene remnant%2C similar to Yersinia pestis CO92 YPO2639 pseudogene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1075 YP_1076 YP1076 YP_1076 1151822 1152073 - hypothetical protein no significant database match found gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1076 YP_1077 YP1077 mhpC1 mhpC1 1152784 1153551 + putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) similar to Yersinia pestis CO92 YPO2638 and Yersinia pestis KIM y1212. Contains Alpha/beta hydrolase fold (Interpro|IPR000073). Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Epoxide hydrolase (Interpro|IPR000639%2C (GO:0003824)). Contains Prolyl aminopeptidase S33 (Interpro|IPR002410%2C (GO:0006508)). Contains Alpha/beta hydrolase (Interpro|IPR003089%2C (GO:0006725)%2C (GO:0016787)) gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1077 YP_1078 YP1078 YP_1078 1153883 1154170 + hypothetical protein similar to Yersinia pestis CO92 YPO2637 and Yersinia pestis KIM y1211. Contains Helix-turn-helix protein%2C CopG family (Interpro|IPR002145%2C (GO:0006355)) gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1078 YP_1080 YP1080 fldA2 fldA2 1154587 1155114 + flavodoxin 1 similar to Yersinia pestis CO92 fldA and Yersinia pestis KIM fldA. Contains Flavodoxin-like domain (Interpro|IPR001094%2C (GO:0006118)%2C (GO:0008246)). Contains Flavodoxin (Interpro|IPR001226%2C (GO:0006118)%2C (GO:0009457)) gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1080 YP_1081 YP1081 fur2 fur2 1155482 1155928 + ferric uptake regulator similar to Yersinia pestis CO92 fur and Yersinia pestis KIM fur. Contains Ferric-uptake regulator (Interpro|IPR002481%2C (GO:0006355)) gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1081 YP_1082 YP1082 chb chb 1156369 1159045 - similar to gi|2145546|pir||JC4732 beta-N-acetylhexosaminidase (EC 3.2.1.52) - Serratia marcescens%2C gi|1369888|gb|AAB03808.1| (L43594) N-acetyl-beta-D-glucosaminidase [Serratia marcescens]%2C(len:885 aa).There is a frameshift after codon 188. The sequence has been checked and is believed to be correct. pseudogene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1082 YP_1083 YP1083 YP_1083 1159361 1160782 - putative exported protein similar to Yersinia pestis CO92 YPO2631 and Yersinia pestis KIM y1206 gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1083 YP_1084 YP1084 glnS2 glnS2 1161488 1163245 - glutaminyl-tRNA synthetase similar to Yersinia pestis CO92 glnS and Yersinia pestis KIM glnS. Contains Glutamyl-tRNA synthetase%2C class Ic (Interpro|IPR000924%2C (GO:0006424)). Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Glutaminyl-tRNA synthetase (Interpro|IPR004514%2C (GO:0006424)) gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1084 YP_1085 YP1085 nagE nagE 1163370 1165403 - pts system%2C N-acetylglucosamine-specific IIABC component similar to Yersinia pestis CO92 nagE and Yersinia pestis KIM nagE. Contains Sugar-specific permease%2C EIIA 1 domain (Interpro|IPR001127%2C (GO:0016020)). Contains Phosphotransferase system PTS%2C EIIB domain (Interpro|IPR001996%2C (GO:0016020)). Contains Phosphotransferase system%2C EIIC (Interpro|IPR003352%2C (GO:0016020)) gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1085 YP_1086 YP1086 nagB nagB 1165803 1166603 + putative glucosamine-6-phosphate isomerase similar to Yersinia pestis CO92 nagB and Yersinia pestis KIM nagB. Contains Glucosamine-6-phosphate isomerase (Interpro|IPR004547%2C (GO:0006044)). Contains Glucosamine/galactosamine-6-phosphate isomerase (Interpro|IPR006148%2C (GO:0005975)) gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1086 YP_1087 YP1087 nagA1 nagA1 1166623 1167768 + putative N-acetylglucosamine-6-phosphate deacetylase similar to Yersinia pestis CO92 nagA and Yersinia pestis KIM nagA. Contains Cloacin (Interpro|IPR003058%2C (GO:0005727)). Contains N-acetylglucosamine-6-phosphate deacetylase (Interpro|IPR003764%2C (GO:0006044)%2C (GO:0008448)). Contains Amidohydrolase (Interpro|IPR006680) gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1087 YP_1088 YP1088 nagC2 nagC2 1167746 1169011 + putative N-acetylglucosamine regulatory protein similar to Yersinia pestis CO92 nagC and Yersinia pestis KIM nagC. Contains ROK family (Interpro|IPR000600) gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1088 YP_1089 YP1089 YP_1089 1169084 1169836 + similar to Yersinia pestis CO92 nagD. Contains a nonsense mutation at codon 95. The sequence has been checked and is believed to be correct. Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IIA (Interpro|IPR006357) pseudogene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1089 YP_1090 YP1090 asnB asnB 1170191 1171855 + asparagine synthetase B similar to Yersinia pestis CO92 asnB and Yersinia pestis KIM asnB. Contains Glutamine amidotransferase%2C class-II (Interpro|IPR000583%2C (GO:0008152)%2C (GO:0016003)). Contains Asparagine synthase (Interpro|IPR001962%2C (GO:0006529)). Contains Asparagine synthase%2C glutamine-hydrolyzing (Interpro|IPR006426) gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1090 YP_1092 YP1092 ubiF ubiF 1173326 1174507 - putative 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase similar to Yersinia pestis CO92 ubiF and Yersinia pestis KIM y1196. Contains NAD binding site (Interpro|IPR000205). Contains Flavoprotein monooxygenase (Interpro|IPR000733%2C (GO:0008246)). Contains Aromatic-ring hydroxylase (Interpro|IPR003042%2C (GO:0008152)%2C (GO:0016491)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1092 YP_1093 YP1093 miaB miaB 1174635 1176173 + putative tRNA-thiotransferase similar to Yersinia pestis CO92 miaB and Yersinia pestis KIM y1195. Contains Deoxyribonuclease/rho motif-related TRAM (Interpro|IPR002792). Contains Protein of unknown function UPF0004 (Interpro|IPR005839%2C (GO:0005554)). Contains tRNA-i(6)A37 modification enzyme MiaB (Interpro|IPR006463). Contains Elongator protein 3/MiaB/NifB (Interpro|IPR006638) gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1093 YP_1094 YP1094 phoH1 phoH1 1176461 1177573 + Phosphate starvation-inducible protein PhoH%2C predicted ATPase similar to Yersinia pestis CO92 YPO2619 and Yersinia pestis KIM y1194. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains PhoH-like protein (Interpro|IPR003714%2C (GO:0016036)) gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1094 YP_1095 YP1095 YP_1095 1177570 1178043 + putative metal-dependent hydrolase similar to Yersinia pestis CO92 YPO2618 and Yersinia pestis KIM y1193. Contains Protein of unknown function UPF0054 (Interpro|IPR002036%2C (GO:0005554)) gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1095 YP_1096 YP1096 corC corC 1178161 1179039 + putative membrane protein similar to Yersinia pestis CO92 YPO2617 and Yersinia pestis KIM corC. Contains CBS domain (Interpro|IPR000644). Contains Transporter associated domain (Interpro|IPR005170) gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1096 YP_1097 YP1097 lnt lnt 1179008 1180594 + apolipoprotein N-acyltransferase similar to Yersinia pestis KIM lnt. Contains Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (Interpro|IPR003010%2C (GO:0006807)%2C (GO:0016810)). Contains Apolipoprotein N-acyltransferase (Interpro|IPR004563%2C Cellular Component: integral membrane protein (GO:0016021)%2C (GO:0042158)) gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1097 YP_1098 YP1098 glnH1 glnH1 1181359 1182276 + putative amino acid-binding protein precursor similar to Yersinia pestis CO92 glnH and Yersinia pestis KIM gltI. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Ionotropic glutamate receptor (Interpro|IPR001320%2C (GO:0016020)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Lysine-arginine-ornithine-binding periplasmic protein (Interpro|IPR005768%2C (GO:0030288)) gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1098 YP_1099 YP1099 gltJ1 gltJ1 1182399 1183190 + putative glutamate/aspartate transport system permease similar to Yersinia pestis CO92 gltJ and Yersinia pestis KIM gltJ. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1099 YP_1100 YP1100 gltK gltK 1183190 1183864 + putative glutamate/aspartate transport system permease similar to Yersinia pestis CO92 gltK and Yersinia pestis KIM gltK. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1100 YP_1101 YP1101 gltL gltL 1183864 1184589 + putative glutamate/aspartate transport ATP-binding protein similar to Yersinia pestis CO92 gltL and Yersinia pestis KIM gltL. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1101 YP_1102 YP1102 tar2 tar2 1184723 1185223 - Methyl-accepting chemotaxis protein similar to Yersinia pestis CO92 YPO2611 and Yersinia pestis KIM y1185. gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1102 YP_1103 YP1103 leuS leuS 1185466 1188048 + leucyl-tRNA synthetase similar to Yersinia pestis CO92 leuS and Yersinia pestis KIM leuS. Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Aminoacyl-tRNA synthetase%2C class Ia (Interpro|IPR002300%2C (GO:0006418)). Contains Leucyl-tRNA synthetase bacterial/mitochondrial%2C class Ia (Interpro|IPR002302%2C (GO:0006429)) gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1103 YP_1104 YP1104 rlpB rlpB 1188063 1188686 + rare lipoprotein B precursor similar to Yersinia pestis CO92 rlpB and Yersinia pestis KIM rlpB. gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1104 YP_1105 YP1105 holA holA 1188683 1189717 + DNA polymerase III%2C delta subunit similar to Yersinia pestis CO92 holA and Yersinia pestis KIM holA gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1105 YP_1106 YP1106 nadD nadD 1189677 1190369 + putative nicotinate-nucleotide adenylyltransferase similar to Yersinia pestis CO92 nadD and Yersinia pestis KIM y1181. Contains Cytidylyltransferase (Interpro|IPR004820%2C (GO:0009058)%2C (GO:0016779)). Contains Cytidyltransferase-related domain (Interpro|IPR004821). Contains Probable nicotinate-nucleotide adenylyltransferase (Interpro|IPR005248) gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1106 YP_1107 YP1107 YP_1107 1190593 1190910 + conserved hypothetical protein (like plant Iojap proteins) similar to Yersinia pestis CO92 YPO2606 and Yersinia pestis KIM y1180. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Iojap-related protein (Interpro|IPR004394%2C (GO:0005554)) gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1107 YP_1108 YP1108 YP_1108 1190914 1191384 + hypothetical protein similar to Yersinia pestis CO92 YPO2605 and Yersinia pestis KIM y1179. Contains Protein of unknown function DUF163 (Interpro|IPR003742) gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1108 YP_1109 YP1109 pbpA pbpA 1191466 1193361 + penicillin-binding protein 2 similar to Yersinia pestis CO92 pbpA and Yersinia pestis KIM mrdA. Contains Penicillin-binding protein%2C transpeptidase domain (Interpro|IPR001460%2C (GO:0008233)%2C (GO:0008658)%2C (GO:0009273)). Contains Penicillin-binding Protein dimerisation domain (Interpro|IPR005311%2C (GO:0008658)) gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1109 YP_1110 YP1110 ftsW1 ftsW1 1193532 1194644 + rod shape-determining protein similar to Yersinia pestis CO92 rodA and Yersinia pestis KIM mrdB. Contains Cell cycle protein (Interpro|IPR001182) gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1110 YP_1111 YP1111 rlpA rlpA 1194654 1195736 + rare lipoprotein A precursor similar to Yersinia pestis CO92 rlpA and Yersinia pestis KIM rlpA. Contains Rare lipoprotein A (Interpro|IPR005132) gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1111 YP_1112 YP1112 dacA dacA 1196139 1197341 + putative penicillin-binding protein 5 similar to Yersinia pestis CO92 dacA and Yersinia pestis KIM dacA. Contains D-alanyl-D-alanine carboxypeptidase 1%2C S11 family (Interpro|IPR001967%2C (GO:0006508)) gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1112 YP_1113 YP1113 YP_1113 1197539 1197802 + hypothetical protein similar to Yersinia pestis CO92 YPO2600 and Yersinia pestis KIM y1174 gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1113 YP_1114 YP1114 lipB lipB 1198014 1198715 + lipoate-protein ligase B similar to Yersinia pestis CO92 lipB and Yersinia pestis KIM lipB. Contains Lipoate-protein ligase B (Interpro|IPR000544%2C (GO:0009107)). Contains Biotin/lipoate A/B protein ligase domain (Interpro|IPR004143%2C (GO:0006464)) gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1114 YP_1115 YP1115 lipA lipA 1198926 1199873 + lipoic acid synthetase similar to Yersinia pestis CO92 lipA and Yersinia pestis KIM lipA. Contains Lipoate synthase (Interpro|IPR003698%2C (GO:0009107)%2C (GO:0016992)). Contains Elongator protein 3/MiaB/NifB (Interpro|IPR006638) gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1115 YP_1116 YP1116 YP_1116 1199898 1200134 + hypothetical protein no significant database match found gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1116 YP_1117 YP1117 tatE tatE 1200054 1200311 - sec-independent protein translocase protein similar to Yersinia pestis CO92 tatE and Yersinia pestis KIM y1170. Contains Bacterial sec-independent translocation protein mttA/Hcf106 (Interpro|IPR003369%2C (GO:0015031)). Contains Twin-arginine translocation protein TatA/E (Interpro|IPR006312) gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1117 YP_1118 YP1118 crcB1 crcB1 1200872 1201261 + putative membrane protein similar to Yersinia pestis CO92 crcB and Yersinia pestis KIM crcB. Contains Camphor resistance CrcB protein (Interpro|IPR003691) gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1118 YP_1119 YP1119 YP_1119 1201675 1201908 + hypothetical protein similar to Yersinia pestis KIM y1167 gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1119 YP_1120 YP1120 cspE1 cspE1 1201684 1201938 - putative cold shock protein similar to Yersinia pestis CO92 cspE and Yersinia pestis KIM cspE. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)). Contains cAMP-dependent protein kinase (Interpro|IPR002373%2C Cellular Component: cAMP-dependent protein kinase complex (GO:0005952)%2C (GO:0006468)%2C (GO:0008603)). Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1120 YP_1121 YP1121 cspC1 cspC1 1202169 1202651 + putative cold-shock protein similar to Yersinia pestis KIM y1165. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1121 YP_1122 YP1122 citB2 citB2 1202971 1203588 - putative LuxR-family regulatory proteins similar to Yersinia pestis CO92 YPO2593 and Yersinia pestis KIM y1164. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)) gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1122 YP_1123 YP1123 YP_1123 1204011 1204976 + putative membrane protein similar to Yersinia pestis CO92 YPO2592 and Yersinia pestis KIM y1163. Contains Basic helix-loop-helix dimerization domain bHLH (Interpro|IPR001092) gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1123 YP_1124 YP1124 YP_1124 1205158 1205340 + hypothetical protein similar to Yersinia pestis CO92 YPO2591 and Yersinia pestis KIM y1161 gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1124 YP_1125 YP1125 YP_1125 1205358 1205552 - hypothetical protein similar to Yersinia pestis CO92 YPO2590 and Yersinia pestis KIM y1160 gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1125 YP_1126 YP1126 YP_1126 1205995 1206282 + hypothetical protein similar to Yersinia pestis CO92 YPO2589 and Yersinia pestis KIM y1159. Contains Protein of unknown function DUF176 (Interpro|IPR003771) gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1126 YP_1127 YP1127 mdlB2 mdlB2 1206298 1208193 - putative ABC transport protein similar to Yersinia pestis CO92 YPO2588 and Yersinia pestis KIM y1158. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1127 YP_1128 YP1128 YP_1128 1208658 1209473 - hypothetical protein similar to Yersinia pestis CO92 YPO2587 and Yersinia pestis KIM y1155 gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1128 YP_1129 YP1129 iolE iolE 1209483 1210541 - putative myo-inositol catabolism protein iolB similar to Yersinia pestis KIM y1154 gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1129 YP_1130 YP1130 rbsK2 rbsK2 1210556 1212433 - putative carbohydrate kinase similar to Yersinia pestis CO92 YPO2585 and Yersinia pestis KIM y1153. Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173) gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1130 YP_1131 YP1131 mviM1 mviM1 1212558 1213694 - putative dehydrogenases-related protein similar to Yersinia pestis KIM y1152. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)). Contains Oxidoreductase%2C C-terminal (Interpro|IPR004104%2C (GO:0008152)%2C (GO:0016491)). Contains Homoserine dehydrogenase%2C NAD binding domain (Interpro|IPR005106) gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1131 YP_1132 YP1132 araH4 araH4 1213715 1214743 - sugar transport system permease protein similar to Yersinia pestis CO92 YPO2583 and Yersinia pestis KIM. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1132 YP_1133 YP1133 rbsA1 rbsA1 1214755 1216302 - ATP-binding component of D-ribose high-affinity transport system similar to Yersinia pestis KIM rbsA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains GTP1/OBG family (Interpro|IPR006073). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1133 YP_1134 YP1134 rbsB3 rbsB3 1216351 1217280 - putative sugar-binding periplasmic protein similar to Yersinia pestis CO92 YPO2581. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1134 YP_1135 YP1135 YP_1135 1217406 1218391 - similar to gi|16125545|ref|NP_420109.1| (NC_002696) myo-inositol 2-dehydrogenase [Caulobacter crescentus CB15] (len:328 aa). There is a frameshift after codon 153. The sequence has been checked and is believed to be correct. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)). Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230) pseudogene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1135 YP_1136 YP1136 ilvB1 ilvB1 1218685 1220685 - putative thiamine pyrophosphate-dependent protein similar to Yersinia pestis CO92 YPO2578 and Yersinia pestis KIM y1147. Contains Pyruvate decarboxylase (Interpro|IPR000399) gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1136 YP_1137 YP1137 putA1 putA1 1220645 1222171 - putative aldehyde dehydrogenase similar to Yersinia pestis CO92 YPO2577 and Yersinia pestis KIM y1146. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1137 YP_1138 YP1138 rpiR3 rpiR3 1222498 1223352 + Transcriptional regulators similar to Yersinia pestis CO92 YPO2576 and Yersinia pestis KIM y1145. Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)) gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1138 YP_1139 YP1139 YP_1139 1223601 1223798 - hypothetical protein no significant database match found gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1139 YP_1140 YP1140 YP_1140 1223980 1224534 + putative membrane protein similar to Yersinia pestis CO92 YPO2574 and Yersinia pestis KIM y1144. gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1140 YP_1141 YP1141 YP_1141 1224905 1230919 + putative membrane protein similar to Yersinia pestis CO92 YPO2573 and Yersinia pestis KIM y1143. gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1141 YP_1142 YP1142 mrcA2 mrcA2 1230976 1233339 + putative penicillin-binding protein similar to Yersinia pestis KIM y1141. Contains Glycosyl transferase%2C family 51 (Interpro|IPR001264%2C (GO:0009274)). Contains Penicillin-binding protein%2C transpeptidase domain (Interpro|IPR001460%2C (GO:0008233)%2C (GO:0008658)%2C (GO:0009273)) gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1142 YP_1143 YP1143 nlp-2 nlp-2 1233552 1233854 - putative regulator similar to Yersinia pestis KIM y1140 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1143 YP_1145 YP1145 YP_1145 1234470 1235051 + hypothetical protein similar to Yersinia pestis CO92 YPO2788 and Yersinia pestis KIM y1139 gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1145 YP_1146 YP1146 YP_1146 1235123 1235326 + hypothetical protein no significant database match found gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1146 YP_1147 YP1147 YP_1147 1235280 1235720 + hypothetical protein similar to Yersinia pestis KIM y1138 gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1147 YP_1149 YP1149 YP_1149 1235952 1236353 + putative membrane protein similar to Yersinia pestis CO92 YPO2792 and Yersinia pestis KIM y1137. gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1149 YP_1150 YP1150 hcp1 hcp1 1236365 1236937 - putative membrane protein similar to Yersinia pestis CO92 YPO2793 and Yersinia pestis KIM y1136 gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1150 YP_1151 YP1151 YP_1151 1236961 1237212 - hypothetical protein similar to Yersinia pestis CO92 YPO2794 and Yersinia pestis KIM y1135 gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1151 YP_1152 YP1152 YP_1152 1237251 1237490 - hypothetical protein similar to Yersinia pestis CO92 YPO2795 gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1152 YP_1153 YP1153 yapC yapC 1238299 1240215 + putative autotransporter protein similar to Yersinia pestis CO92 yapC and Yersinia pestis KIM yapC. Contains Pertactin virulence factor%2C C-terminal (Interpro|IPR003991%2C (GO:0007155)). Contains Pertactin domain (Interpro|IPR004899). Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1153 YP_1154 YP1154 YP_1154 1240750 1241331 + hypothetical protein similar to Yersinia pestis CO92 YPO2797 gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1154 YP_1155 YP1155 YP_1155 1241346 1241654 - similar to Yersinia pestis CO92 YPO2798 and Yersinia pestis KIM y1133. pseudogene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1155 YP_1156 YP1156 YP_1156 1241733 1242941 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1156 YP_1157 YP1157 YP_1157 1243196 1243357 + hypothetical protein no significant database match found gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1157 YP_1158 YP1158 proP11 proP11 1243393 1245600 + putative membrane protein similar to Yersinia pestis CO92 YPO2801 and Yersinia pestis KIM y1130 gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1158 YP_1159 YP1159 YP_1159 1245593 1246123 + putative membrane protein similar to Yersinia pestis CO92 YPO2802 and Yersinia pestis KIM y1129 gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1159 YP_1160 YP1160 bglB bglB 1246282 1248663 + putative beta-glucosidase similar to Yersinia pestis CO92 bglB and Yersinia pestis KIM y1128. Contains Glycoside hydrolase%2C family 3%2C N-terminal (Interpro|IPR001764%2C (GO:0005975)). Contains Glycoside hydrolase%2C family 3%2C C-terminal (Interpro|IPR002772%2C (GO:0005975)) gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1160 YP_1161 YP1161 YP_1161 1248742 1250370 - hypothetical protein similar to Yersinia pestis CO92 YPO2804 and Yersinia pestis KIM y1127 gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1161 YP_1162 YP1162 aRA11 aRA11 1250801 1251694 + putative aldo/keto reductase similar to Yersinia pestis CO92 YPO2805 and Yersinia pestis KIM y1125. Contains Aldo/keto reductase (Interpro|IPR001395) gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1162 YP_1163 YP1163 tas1 tas1 1251717 1252709 + putative aldo/keto reductase similar to Yersinia pestis CO92 YPO2806 and Yersinia pestis KIM y1124. Contains Aldo/keto reductase (Interpro|IPR001395) gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1163 YP_1164 YP1164 ptxR ptxR 1252764 1253657 - putative LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 ptxR and Yersinia pestis KIM y1123. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1164 YP_1165 YP1165 YP_1165 1253751 1254773 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1165 YP_1166 YP1166 dnaC_10 dnaC_10 1254770 1255552 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1166 YP_1167 YP1167 fabF2 fabF2 1255568 1256596 + similar to N-terminal of gi|25286613|pir||E98212%2C 3-oxoacyl-acyl carrier protein synthase II PA1373%2C Agrobacterium tumefaciens (strain C58%2C Cereon)%3B this CDS has been disrupted by IS100 element and the C-termianl located in 938560.938861(complement). The rearrangement has been confirmed. Contains Protein kinase (Interpro|IPR000719%2C (GO:0006468)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)) pseudogene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1167 YP_1168 YP1168 tnp_14 tnp_14 1256713 1257222 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase IS200-like (Interpro|IPR002686). gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1168 YP_1171 YP1171 YP_1171 1257806 1258384 - putative lipoprotein similar to Yersinia pestis CO92 YPO1422 and Yersinia pestis KIM y2746. Contains Protein of unknown function DUF330 (Interpro|IPR005586) gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1171 YP_1172 YP1172 pqiB1 pqiB1 1258381 1260060 - paraquat-inducible protein B similar to Yersinia pestis KIM pqiB gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1172 YP_1173 YP1173 pqiA1 pqiA1 1260020 1261306 - putative paraquat-inducible protein A similar to Yersinia pestis CO92 pqiA and Yersinia pestis KIM pqiA. Contains Conserved hypothetical protein 155 (Interpro|IPR005219) gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1173 YP_1174 YP1174 uup2 uup2 1261435 1263348 - ABC transporter ATP-binding protein similar to Yersinia pestis CO92 uup. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1174 YP_1175 YP1175 YP_1175 1263354 1265474 - putative N6-adenine-specific DNA methylases similar to Yersinia pestis CO92 YPO1418 and Yersinia pestis KIM y2751. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Putative RNA methylase (Interpro|IPR000241%2C (GO:0005554)). Contains Site-specific DNA-methyltransferase (cytosine-N4-specific) (Interpro|IPR001091%2C (GO:0008170)). Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C N12 class (Interpro|IPR002296%2C (GO:0008170)). Contains THUMP domain (Interpro|IPR004114) gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1175 YP_1176 YP1176 YP_1176 1265574 1266686 + putative iron-sulfur binding protein similar to Yersinia pestis CO92 YPO1417 and Yersinia pestis KIM y2752. Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains MOSC domain (Interpro|IPR005302). Contains MOSC N-terminal beta barrel domain (Interpro|IPR005303). Contains 2Fe-2S ferredoxin (Interpro|IPR006058%2C (GO:0006118)%2C (GO:0008042)) gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1176 YP_1177 YP1177 YP_1177 1266712 1267263 - hypothetical protein similar to Yersinia pestis CO92 YPO1416 and Yersinia pestis KIM y2753 gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1177 YP_1178 YP1178 pyrD pyrD 1267446 1268456 - dihydroorotate dehydrogenase similar to Yersinia pestis CO92 pyrD and Yersinia pestis KIM pyrD. Contains Dihydroorotate dehydrogenase (Interpro|IPR001295%2C (GO:0006207)). Contains FMN/related compound-binding core (Interpro|IPR003009). Contains Dihydroorotate dehydrogenase 2 (Interpro|IPR005719%2C (GO:0016020)) gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1178 YP_1179 YP1179 pepN pepN 1269065 1271680 - putative aminopeptidase N similar to Yersinia pestis CO92 pepN and Yersinia pestis KIM pepN. Contains Membrane alanine aminopeptidase (Interpro|IPR001930%2C (GO:0006508)). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1179 YP_1180 YP1180 pncB pncB 1272369 1273619 + putative nicotinate phosphoribosyltransferase similar to Yersinia pestis CO92 pncB and Yersinia pestis KIM pncB. Contains Nicotinate phosphoribosyltransferase (Interpro|IPR006406) gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1180 YP_1181 YP1181 asnS asnS 1274133 1275533 + asparaginyl-tRNA synthetase similar to Yersinia pestis CO92 asnS and Yersinia pestis KIM asnS. Contains Aspartyl-tRNA synthetase%2C class IIb (Interpro|IPR002312%2C (GO:0006422)). Contains tRNA synthetase%2C class II (D%2C K and N) (Interpro|IPR004364%2C (GO:0006418)). Contains OB-fold nucleic acid binding domain (Interpro|IPR004365%2C (GO:0003676)). Contains Asparaginyl-tRNA synthetase%2C class IIb (Interpro|IPR004522%2C (GO:0006421)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1181 YP_1182 YP1182 ompC2 ompC2 1275816 1276919 + putative outer membrane porin C protein similar to Yersinia pestis CO92 YPO1411 and Yersinia pestis KIM y2759. Contains Porin%2C Gram-negative type (Interpro|IPR001702%2C (GO:0016020)). Contains Porin%2C E.coli/Salmonella type (Interpro|IPR001897%2C (GO:0016020)). Contains Outer membrane protein P2 (Interpro|IPR003229). Contains Porin%2C Gram-negative type (Interpro|IPR001702%2C (GO:0016020)). Contains Porin%2C E.coli/Salmonella type (Interpro|IPR001897%2C (GO:0016020)). Contains Outer membrane protein P2 (Interpro|IPR003229) gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1182 YP_1183 YP1183 aspC aspC 1277161 1278366 + aspartate aminotransferase similar to Yersinia pestis KIM aspC. Contains Aspartate/other aminotransferase (Interpro|IPR000796%2C (GO:0006520)%2C (GO:0008483)). Contains Aminotransferase%2C class-I (Interpro|IPR004838%2C (GO:0009058)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1183 YP_1184 YP1184 gloB1 gloB1 1278790 1279437 - metallo-beta-lactamase superfamily protein similar to Yersinia pestis CO92 YPO1409 and Yersinia pestis KIM y2761. Contains Beta-lactamase-like (Interpro|IPR001279) gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1184 YP_1185 YP1185 YP_1185 1279498 1280046 - putative exported protein similar to Yersinia pestis CO92 YPO1408 and Yersinia pestis KIM y2762 gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1185 YP_1186 YP1186 YP_1186 1280270 1282126 - putative exported protein similar to Yersinia pestis CO92 YPO1407 and Yersinia pestis KIM y2763. Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)) gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1186 YP_1187 YP1187 tnp_15 tnp_15 1282410 1282919 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase IS200-like (Interpro|IPR002686). gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1187 YP_1188 YP1188 mukB1 mukB1 1283084 1287541 - cell division protein similar to Yersinia pestis CO92 mukB and Yersinia pestis KIM mukB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1188 YP_1189 YP1189 mukE mukE 1287538 1288239 - condesin subunit E similar to Yersinia pestis CO92 mukE gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1189 YP_1190 YP1190 mukF mukF 1288247 1289569 - putative killing factor protein similar to Yersinia pestis CO92 mukF and Yersinia pestis KIM mukF. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)). Contains Formyl/methionyl peptide receptor (Interpro|IPR000826%2C (GO:0016021)). Contains KicB killing factor (Interpro|IPR005582) gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1190 YP_1191 YP1191 smtA2 smtA2 1289566 1290351 - putative methyltransferase similar to Yersinia pestis CO92 smtA and Yersinia pestis KIM smtA. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1191 YP_1192 YP1192 YP_1192 1291124 1292056 - hypothetical protein similar to Yersinia pestis KIM y2770 gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1192 YP_1193 YP1193 kdsB kdsB 1292380 1293132 - putative 3-deoxy-manno-octulosonate cytidylyltransferase similar to Yersinia pestis CO92 kdsB and Yersinia pestis KIM kdsB. Contains Acylneuraminate cytidylyltransferase (Interpro|IPR003329%2C (GO:0009103)). Contains 3-deoxy-D-manno-octulosonate cytidylyltransferase (Interpro|IPR004528%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009103)) gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1193 YP_1194 YP1194 YP_1194 1293129 1293362 - hypothetical protein Best Blastp hit %3D gi|16121679|ref|NP_404992.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]%2C gi|15979448|emb|CAC90228.1| (AJ414148) conserved hypothetical protein [Yersinia pestis]%2C(len:60 aa)%3B. Contains Protein of unknown function DUF343 (Interpro|IPR005651) gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1194 YP_1195 YP1195 cspE2 cspE2 1293859 1294092 - cold shock protein similar to Yersinia pestis KIM cspE. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)). Contains cAMP-dependent protein kinase (Interpro|IPR002373%2C Cellular Component: cAMP-dependent protein kinase complex (GO:0005952)%2C (GO:0006468)%2C (GO:0008603)). Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1195 YP_1196 YP1196 YP_1196 1294787 1296205 + hypothetical protein similar to Yersinia pestis CO92 YPO1397 and Yersinia pestis KIM y2775. gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1196 YP_1197 YP1197 lpxK lpxK 1296213 1297199 - tetraacyldisaccharide 4'-kinase similar to Yersinia pestis CO92 lpxK and Yersinia pestis KIM y2776. Contains Tetraacyldisaccharide-1-P 4'-kinase (Interpro|IPR003758%2C (GO:0009245)) gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1197 YP_1198 YP1198 msbA msbA 1297196 1298815 - putative transport ATP-binding protein similar to Yersinia pestis CO92 msbA and Yersinia pestis KIM msbA. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1198 YP_1199 YP1199 comEC comEC 1298980 1301271 - putative membrane protein similar to Yersinia pestis CO92 YPO1394 and Yersinia pestis KIM y2778. Contains Beta-lactamase-like (Interpro|IPR001279). Contains ComEC/Rec2-related protein (Interpro|IPR004477). Contains DNA internalization-related competence protein ComEC/Rec2 (Interpro|IPR004797%2C Cellular Component: integral membrane protein (GO:0016021)%2C (GO:0030420)) gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1199 YP_1200 YP1200 ihfB ihfB 1301818 1302102 - integration host factor beta-subunit similar to Yersinia pestis CO92 ihfB and Yersinia pestis KIM himD. Contains Histone-like bacterial DNA-binding protein (Interpro|IPR000119%2C (GO:0003677)). Contains Integration host factor%2C beta subunit (Interpro|IPR005685%2C (GO:0006417)) gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1200 YP_1201 YP1201 rpsA rpsA 1302163 1303836 - 30S ribosomal protein S1 similar to Yersinia pestis CO92 rpsA and Yersinia pestis KIM rpsA. Contains Ribosomal protein S1 (Interpro|IPR000110%2C (GO:0006412)). Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)) gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1201 YP_1202 YP1202 cmk cmk 1304010 1304702 - cytidylate kinase similar to Yersinia pestis CO92 cmk and Yersinia pestis KIM cmk. Contains Cytidylate kinase (Interpro|IPR003136%2C (GO:0006139)) gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1202 YP_1203 YP1203 aroA aroA 1305015 1306301 - 3-phosphoshikimate 1-carboxyvinyltransferase similar to Yersinia pestis CO92 aroA. Contains EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) (Interpro|IPR001986). Contains 3-phosphoshikimate 1-carboxyvinyltransferase (Interpro|IPR006264) gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1203 YP_1204 YP1204 serC serC 1306465 1307412 - phosphoserine aminotransferase similar to Yersinia pestis CO92 serC and Yersinia pestis KIM serC. Contains Aminotransferase%2C class V (Interpro|IPR000192%2C (GO:0008152)%2C (GO:0008483)). Contains Phosphoserine aminotransferase (Interpro|IPR003248%2C (GO:0006564)) gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1204 YP_1205 YP1205 YP_1205 1307917 1309785 - putative exported protein similar to Yersinia pestis CO92 YPO1388 and Yersinia pestis KIM y2785 gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1205 YP_1206 YP1206 YP_1206 1309785 1310879 - putative exported protein similar to Yersinia pestis CO92 YPO1387 and Yersinia pestis KIM y2786 gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1206 YP_1207 YP1207 ansB ansB 1311148 1312185 - putative L-asparaginase II precursor similar to Yersinia pestis CO92 ansB and Yersinia pestis KIM ansB. Contains L-asparaginase%2C type II (Interpro|IPR004550%2C (GO:0006528)). Contains Asparaginase/glutaminase (Interpro|IPR006034%2C (GO:0006520)) gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1207 YP_1208 YP1208 YP_1208 1312334 1314100 + hypothetical protein similar to Yersinia pestis CO92 YPO1385 and Yersinia pestis KIM y2788. Contains Protein of unknown function DUF181 (Interpro|IPR003776) gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1208 YP_1209 YP1209 focA focA 1314796 1315653 + putative formate transporter 1 similar to Yersinia pestis CO92 focA and Yersinia pestis KIM focA. Contains Formate/nitrite transporter (Interpro|IPR000292%2C (GO:0016020)). Contains Cl- channel%2C voltage gated (Interpro|IPR001807%2C (GO:0016020)) gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1209 YP_1210 YP1210 pflB pflB 1315637 1317991 + formate acetyltransferase 1 similar to Yersinia pestis CO92 pflB and Yersinia pestis KIM pflB. Contains Formate C-acetyltransferase glycine radical (Interpro|IPR001150%2C (GO:0008152)). Contains Pyruvate formate-lyase%2C PFL (Interpro|IPR004184%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006006)%2C (GO:0008861)). Contains Formate acetyltransferase (Interpro|IPR005949%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0005975)%2C (GO:0008861)) gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1210 YP_1211 YP1211 YP_1211 1318109 1318783 - hypothetical protein similar to Yersinia pestis CO92 YPO1382 and Yersinia pestis KIM y2791. Contains Glycosyl transferase%2C family 25 (Interpro|IPR002654%2C (GO:0009103)) gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1211 YP_1212 YP1212 pflA pflA 1319707 1320504 + pyruvate formate lyase activating enzyme 1 similar to Yersinia pestis KIM pflA. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Radical-activating enzyme (Interpro|IPR001989%2C (GO:0016491)) gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1212 YP_1213 YP1213 proP12 proP12 1320658 1321806 - putative membrane protein similar to Yersinia pestis CO92 YPO1380. Contains Polycystic kidney disease type 1 protein (Interpro|IPR000434). Contains SecY protein (Interpro|IPR002208%2C (GO:0009306)%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1213 YP_1214 YP1214 serS serS 1322053 1323345 - seryl-tRNA synthetase similar to Yersinia pestis CO92 serS and Yersinia pestis KIM serS. Contains tRNA synthetases%2C class-II (G%2C H%2C P and S) (Interpro|IPR002314%2C (GO:0006418)). Contains Seryl-tRNA synthetase%2C class IIa (Interpro|IPR002317%2C (GO:0006434)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1214 YP_1215 YP1215 YP_1215 1323587 1324930 - putative ATPase protein similar to Yersinia pestis CO92 YPO1378 and Yersinia pestis KIM y2797. Contains Replication factor C conserved domain (Interpro|IPR000862%2C (GO:0006260)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)) gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1215 YP_1216 YP1216 lolA lolA 1324941 1325510 - putative outer-membrane lipoproteins carrier protein similar to Yersinia pestis CO92 lolA and Yersinia pestis KIM lolA. Contains Outer membrane lipoprotein carrier protein LolA (Interpro|IPR004564%2C (GO:0030288)) gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1216 YP_1217 YP1217 ftsK ftsK 1325742 1329659 - putative cell division protein similar to Yersinia pestis CO92 ftsK and Yersinia pestis KIM ftsK. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Cell divisionFtsK/SpoIIIE protein (Interpro|IPR002543) gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1217 YP_1218 YP1218 lrp2 lrp2 1329782 1330276 - leucine-responsive regulatory protein similar to Yersinia pestis CO92 lrp and Yersinia pestis KIM lrp. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)) gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1218 YP_1219 YP1219 trxB trxB 1331043 1332005 + thioredoxin reductase similar to Yersinia pestis CO92 trxB and Yersinia pestis KIM trxB. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Thioredoxin reductase (Interpro|IPR005982%2C (GO:0019430)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1219 YP_1220 YP1220 cydD cydD 1332446 1334230 + transport ATP-binding protein similar to Yersinia pestis CO92 cydD and Yersinia pestis KIM cydD. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1220 YP_1221 YP1221 cydC cydC 1334233 1335957 + transport ATP-binding protein similar to Yersinia pestis CO92 cydC and Yersinia pestis KIM cydC. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1221 YP_1222 YP1222 aat1 aat1 1336152 1336886 + putative leucyl/phenylalanyl-tRNA-protein transferase similar to Yersinia pestis CO92 aat and Yersinia pestis KIM aat. Contains Leucyl/phenylalanyl-tRNA--protein transferase (Interpro|IPR004616%2C (GO:0030163)). Contains 1-aminocyclopropane-1-carboxylate synthase (Interpro|IPR001176%2C (GO:0009058)%2C (GO:0016847)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1222 YP_1223 YP1223 infA infA 1337052 1337270 + translation initiation factor IF-1 similar to Yersinia pestis CO92 infA and Yersinia pestis KIM infA. Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains Translation initiation factor IF-1 (Interpro|IPR004368%2C (GO:0006413)). Contains S1 domain%2C IF1 type (Interpro|IPR006196) gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1223 YP_1224 YP1224 tnp_16 tnp_16 1337642 1338151 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase IS200-like (Interpro|IPR002686). gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1224 YP_1225 YP1225 clpA1 clpA1 1338378 1340660 - ATP-dependent Clp protease ATP-binding subunit similar to Yersinia pestis CO92 clpA and Yersinia pestis KIM clpA. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Clp%2C N terminal (Interpro|IPR004176%2C (GO:0005524)) gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1225 YP_1226 YP1226 YP_1226 1340680 1341000 - hypothetical protein similar to Yersinia pestis CO92 YPO1367 and Yersinia pestis KIM y2810. Contains Protein of unknown function DUF174 (Interpro|IPR003769) gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1226 YP_1228 YP1228 cspD cspD 1341361 1341624 + cold shock-like protein similar to Yersinia pestis CO92 cspD. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1228 YP_1229 YP1229 YP_1229 1341905 1343854 - putative ABC transporter ATP-binding protein similar to Yersinia pestis CO92 YPO1365 and Yersinia pestis KIM y2813. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Protein of unknown function DUF214 (Interpro|IPR003838) gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1229 YP_1230 YP1230 acrA5 acrA5 1343854 1344882 - putative HlyD family secretion protein similar to Yersinia pestis CO92 YPO1364 and Yersinia pestis KIM y2814. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1230 YP_1231 YP1231 YP_1231 1344999 1345175 + hypothetical protein similar to Yersinia pestis KIM y2815 gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1231 YP_1232 YP1232 virK virK 1345203 1346150 + putative virulence factor similar to Yersinia pestis CO92 YPO1363 and Yersinia pestis KIM y2816 gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1232 YP_1233 YP1233 YP_1233 1346287 1347954 - putative ATP-dependent endonuclease of the OLD family similar to Yersinia pestis CO92 YPO1362 and Yersinia pestis KIM y2817. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1233 YP_1234 YP1234 YP_1234 1348307 1349203 + putative membrane protein similar to Yersinia pestis CO92 YPO1361 and Yersinia pestis KIM y2818. Contains Membrane protein of unknown function DUF340 (Interpro|IPR005642) gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1234 YP_1235 YP1235 hcp2 hcp2 1349406 1351058 + putative prismane protein similar to Yersinia pestis CO92 hcp and Yersinia pestis KIM y2819. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Prismane (Interpro|IPR004137%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006118)%2C (GO:0008042)) gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1235 YP_1236 YP1236 hcr hcr 1351124 1352194 + putative oxidoreductase similar to Yersinia pestis CO92 hcr and Yersinia pestis KIM y2820. Contains Phthalate dioxygenase reductase (Interpro|IPR000951%2C (GO:0006118)%2C (GO:0008246)). Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains Phenol hydroxylase reductase (Interpro|IPR001221%2C (GO:0006118)). Contains Oxidoreductase FAD/NAD(P)-binding (Interpro|IPR001433%2C (GO:0006118)%2C (GO:0008246)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)). Contains 2Fe-2S ferredoxin (Interpro|IPR006058%2C (GO:0006118)%2C (GO:0008042)) gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1236 YP_1237 YP1237 poxB poxB 1352338 1354059 + pyruvate dehydrogenase (cytochrome) similar to Yersinia pestis CO92 poxB and Yersinia pestis KIM poxB. Contains Pyruvate decarboxylase (Interpro|IPR000399) gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1237 YP_1239 YP1239 ltaA ltaA 1354372 1355427 + L-allo-threonine aldolase similar to Yersinia pestis CO92 ltaA and Yersinia pestis KIM y2823. gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1239 YP_1240 YP1240 YP_1240 1355424 1356914 + putative membrane protein similar to Yersinia pestis CO92 YPO1356 and Yersinia pestis KIM y2824 gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1240 YP_1241 YP1241 wcaG3 wcaG3 1357014 1358021 + Nucleoside-diphosphate-sugar epimerases similar to Yersinia pestis CO92 YPO1355. Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1241 YP_1242 YP1242 YP_1242 1358118 1358693 + putative lipoprotein similar to Yersinia pestis CO92 YPO1354 and Yersinia pestis KIM y2826 gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1242 YP_1243 YP1243 pheA2 pheA2 1358863 1359423 + putative chorismate mutase similar to Yersinia pestis CO92 YPO1353 and Yersinia pestis KIM y2828. Contains Chorismate mutase (Interpro|IPR002701%2C (GO:0009073)) gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1243 YP_1244 YP1244 artP artP 1359718 1360446 + arginine transport ATP-binding protein similar to Yersinia pestis CO92 artP. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1244 YP_1245 YP1245 artI3 artI3 1360443 1361198 + arginine-binding periplasmic protein 1 precursor similar to Yersinia pestis CO92 artI and Yersinia pestis KIM artI. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Ionotropic glutamate receptor (Interpro|IPR001320%2C (GO:0016020)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Lysine-arginine-ornithine-binding periplasmic protein (Interpro|IPR005768%2C (GO:0030288)) gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1245 YP_1246 YP1246 artQ artQ 1361210 1361926 + arginine transport system permease protein similar to Yersinia pestis CO92 artQ and Yersinia pestis KIM artQ. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)) gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1246 YP_1247 YP1247 artM3 artM3 1361926 1362594 + arginine transport system permease protein similar to Yersinia pestis CO92 artM and Yersinia pestis KIM artM. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1247 YP_1248 YP1248 rhaT6 rhaT6 1362784 1363644 - Permeases of the drug/metabolite transporter (DMT) superfamily similar to Yersinia pestis KIM y2834. Contains Protein of unknown function DUF6 (Interpro|IPR000620). Contains Blood group Rhesus C/E and D polypeptide (Interpro|IPR002229) gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1248 YP_1249 YP1249 YP_1249 1363626 1365026 - hypothetical protein similar to Yersinia pestis KIM y2835 gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1249 YP_1250 YP1250 smtA3 smtA3 1364989 1365786 - putative ABC transport protein similar to Yersinia pestis KIM y2836 gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1250 YP_1251 YP1251 fepC fepC 1365774 1366559 - putative transport ATP-binding protein similar to Yersinia pestis CO92 YPO1345 and Yersinia pestis KIM y2837. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1251 YP_1252 YP1252 btuC1 btuC1 1366556 1367398 - FecCD transport family protein similar to Yersinia pestis CO92 YPO1344 and Yersinia pestis KIM y2839. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)) . Contains Vacuolar H+-transporting two-sector ATPase%2C C subunit (Interpro|IPR000245%2C (GO:0016020)) gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1252 YP_1253 YP1253 fecB2 fecB2 1367612 1368748 - putative periplasmic binding protein similar to Yersinia pestis CO92 YPO1343 and Yersinia pestis KIM y2842. Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1253 YP_1254 YP1254 hflC3 hflC3 1369115 1370041 - putative SPFH domain protein similar to Yersinia pestis CO92 YPO1342 and Yersinia pestis KIM hflC. Contains Band 7 protein (Interpro|IPR001107). Contains Band 7 protein (Interpro|IPR001107). Contains Stomatin (Interpro|IPR001972) gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1254 YP_1255 YP1255 YP_1255 1370382 1370612 - hypothetical protein similar to Yersinia pestis CO92 YPO1341 gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1255 YP_1256 YP1256 artJ artJ 1370833 1371591 + arginine 3rd transport system periplasmic binding protein similar to Yersinia pestis KIM artJ. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Ionotropic glutamate receptor (Interpro|IPR001320%2C (GO:0016020)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Lysine-arginine-ornithine-binding periplasmic protein (Interpro|IPR005768%2C (GO:0030288)) gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1256 YP_1257 YP1257 trmA1 trmA1 1371718 1372848 - putative RNA methyltransferase similar to Yersinia pestis CO92 YPO1336 and Yersinia pestis KIM y2845. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains tRNA (uracil-5-)-methyltransferase/TrmA (Interpro|IPR001566%2C (GO:0008173)) gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1257 YP_1258 YP1258 YP_1258 1372932 1373396 - putative membrane protein similar to Yersinia pestis CO92 YPO1335 and Yersinia pestis KIM y2846 gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1258 YP_1259 YP1259 potI potI 1373521 1374408 - putrescine transport system permease protein similar to Yersinia pestis CO92 potI and Yersinia pestis KIM potI. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1259 YP_1260 YP1260 potH potH 1374405 1375370 - putrescine transport system permease protein similar to Yersinia pestis CO92 potH and Yersinia pestis KIM potH. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Zinc carboxypeptidase A metalloprotease (M14) (Interpro|IPR000834%2C (GO:0006508)) gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1260 YP_1261 YP1261 potG potG 1375395 1376528 - putrescine transport ATP-binding protein similar to Yersinia pestis CO92 potG and Yersinia pestis KIM potG. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Spermidine/putrescine ABC transporter ATP-binding subunit (Interpro|IPR005893%2C (GO:0016020)) gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1261 YP_1262 YP1262 potF potF 1376699 1377925 - putrescine-binding periplasmic protein precursor similar to Yersinia pestis CO92 potF and Yersinia pestis KIM potF. Contains Bacterial periplasmic spermidine/putrescine-binding protein (Interpro|IPR001188%2C (GO:0030288)). Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1262 YP_1263 YP1263 YP_1263 1378326 1378811 - hypothetical protein similar to Yersinia pestis CO92 YPO1330 and Yersinia pestis KIM y2853 gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1263 YP_1264 YP1264 YP_1264 1378953 1379267 - putative membrane protein similar to Yersinia pestis CO92 YPO1328 and Yersinia pestis KIM y2854 gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1264 YP_1265 YP1265 grxA grxA 1379730 1379993 + glutaredoxin 1 similar to Yersinia pestis CO92 grxA and Yersinia pestis KIM grxA. Contains Glutaredoxin (Interpro|IPR002109%2C (GO:0006118)%2C (GO:0009491)). Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1265 YP_1266 YP1266 YP_1266 1380403 1382091 + TrkA%2C Potassium channel-family protein similar to Yersinia pestis CO92 YPO1326 and Yersinia pestis KIM y2857. Contains TrkA-C (Interpro|IPR006037%2C (GO:0006813)%2C (GO:0008324)). Contains YidE/YbjL duplication (Interpro|IPR006512) gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1266 YP_1267 YP1267 pgpB2 pgpB2 1382424 1383239 + putative membrane protein similar to Yersinia pestis CO92 YPO1325 and Yersinia pestis KIM y2858. Contains PA-phosphatase related phosphoesterase (Interpro|IPR000326) gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1267 YP_1268 YP1268 pgpB3 pgpB3 1383239 1383844 + Membrane-associated phospholipid phosphatase similar to Yersinia pestis KIM y2859. Contains PA-phosphatase related phosphoesterase (Interpro|IPR000326) gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1268 YP_1269 YP1269 deoC1 deoC1 1384102 1384773 + putative deoxyribose-phosphate aldolase similar to Yersinia pestis CO92 YPO1323 and Yersinia pestis KIM deoC. Contains Deoxyribose-phosphate aldolase (Interpro|IPR002915%2C (GO:0016228)). Contains Deoxyribose-phosphate aldolase (Interpro|IPR002915%2C (GO:0016228)) gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1269 YP_1270 YP1270 deoR3 deoR3 1385108 1385767 + deoxyribose operon repressor similar to Yersinia pestis CO92 deoR and Yersinia pestis KIM deoR. Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1270 YP_1271 YP1271 sdaC2 sdaC2 1386845 1388167 + serine transporter similar to Yersinia pestis CO92 sdaC and Yersinia pestis KIM sdaC. Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)). Contains Amino acid/polyamine transporter%2C family II (Interpro|IPR002422%2C (GO:0016020)). Contains Serine transporter (Interpro|IPR004694%2C (GO:0016021)) gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1271 YP_1272 YP1272 dacC dacC 1388591 1389889 - D-alanyl-D-alanine carboxypeptidase similar to Yersinia pestis CO92 dacC and Yersinia pestis KIM dacC. Contains D-alanyl-D-alanine carboxypeptidase 1%2C S11 family (Interpro|IPR001967%2C (GO:0006508)) gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1272 YP_1273 YP1273 YP_1273 1390131 1390802 - putative ABC transport integral membrane subunit similar to Yersinia pestis CO92 YPO1319 and Yersinia pestis KIM y2865. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1273 YP_1274 YP1274 abc1 abc1 1390799 1391785 - putative ABC transport ATP-binding subunit similar to Yersinia pestis CO92 YPO1318 and Yersinia pestis KIM abc. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1274 YP_1275 YP1275 nlpA1 nlpA1 1391782 1392606 - putative exported protein similar to Yersinia pestis CO92 YPO1317 and Yersinia pestis KIM y2867. Contains NLPA lipoprotein (Interpro|IPR004872) gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1275 YP_1276 YP1276 pcbC pcbC 1392834 1393901 - putative iron/ascorbate oxidoreductase family protein similar to Yersinia pestis CO92 YPO1316. Contains Isopenicillin N synthase (Interpro|IPR002283%2C (GO:0017000)). Contains 2OG-Fe(II) oxygenase superfamily (Interpro|IPR005123) gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1276 YP_1277 YP1277 serB1 serB1 1394388 1395038 + putative hydrolase similar to Yersinia pestis CO92 YPO1315 and Yersinia pestis KIM y2870. Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IB (PSPase-like) (Interpro|IPR006383). Contains HAD-superfamily subfamily IB hydrolase%2C hypothetical 2 (Interpro|IPR006385) gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1277 YP_1278 YP1278 gst1 gst1 1395138 1395812 + putative glutathione S-transferase-family protein similar to Yersinia pestis CO92 YPO1314 and Yersinia pestis KIM y2871. Contains Glutathione S-transferase%2C N-terminal (Interpro|IPR004045) gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1278 YP_1279 YP1279 yiuR yiuR 1396082 1398079 - putative outer membrane protein similar to Yersinia pestis CO92 YPO1313 and Yersinia pestis KIM yiuR. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1279 YP_1280 YP1280 yiuC yiuC 1398339 1399127 - putative siderophore ABC transporter%2C ATP-binding subunit similar to Yersinia pestis CO92 YPO1312 and Yersinia pestis KIM yiuC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1280 YP_1281 YP1281 yiuB yiuB 1399124 1400206 - putative FecCD-family membrane transport protein similar to Yersinia pestis CO92 YPO1311 and Yersinia pestis KIM yiuB. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1281 YP_1282 YP1282 yiuA yiuA 1400401 1401525 - putative periplasmic substrate-binding transport protein similar to Yersinia pestis CO92 YPO1310 and Yersinia pestis KIM yiuA. Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1282 YP_1283 YP1283 lysP lysP 1401832 1403343 - putative lysine-specific permease similar to Yersinia pestis CO92 lysP and Yersinia pestis KIM lysP. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1283 YP_1284 YP1284 lysR6 lysR6 1403601 1404473 - putative LysR-family transcriptional regulatoryprotein similar to Yersinia pestis CO92 YPO1308 and Yersinia pestis KIM y2877. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1284 YP_1285 YP1285 YP_1285 1405113 1406219 + putative membrane protein similar to Yersinia pestis CO92 YPO1307 and Yersinia pestis KIM y2878. Contains Conserved hypothetical protein 698 (Interpro|IPR004630%2C (GO:0005554)) gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1285 YP_1286 YP1286 nfo nfo 1406356 1407240 + endonuclease IV similar to Yersinia pestis KIM nfo. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AP endonuclease%2C family 2 (Interpro|IPR001719%2C (GO:0006281)) gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1286 YP_1287 YP1287 psaC psaC 1407327 1409840 - outer membrane usher protein PsaC precursor similar to Yersinia pestis CO92 psaC and Yersinia pestis KIM psaC. Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C (GO:0016020)) gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1287 YP_1288 YP1288 psaB psaB 1409882 1410703 - chaperone protein PsaB precursor similar to Yersinia pestis CO92 psaB and Yersinia pestis KIM psaB. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1288 YP_1289 YP1289 psaA psaA 1410830 1411321 - pH 6 Antigen fimbrial subunit similar to Yersinia pestis KIM psaA gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1289 YP_1290 YP1290 psaF psaF 1411851 1412351 - putative membrane protein similar to Yersinia pestis KIM psaF gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1290 YP_1291 YP1291 psaE psaE 1412336 1412980 - putative regulatory protein similar to Yersinia pestis CO92 psaE and Yersinia pestis KIM psaE. Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1291 YP_1292 YP1292 fruA fruA 1413305 1415005 - PTS system%2C fructose-specific IIBC component similar to Yersinia pestis CO92 fruA and Yersinia pestis KIM fruA. Contains Phosphotransferase system%2C EIIC (Interpro|IPR003352%2C (GO:0016020)). Contains Phosphotransferase system PTS%2C fructose-specific IIB subunit (Interpro|IPR003353%2C (GO:0016020)). Contains PTS fructose IIC component (Interpro|IPR006327) gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1292 YP_1293 YP1293 fruK fruK 1415020 1415958 - 1-phosphofructokinase similar to Yersinia pestis CO92 fruK and Yersinia pestis KIM fruK. Contains Ribosomal protein L22/L17 (Interpro|IPR001063%2C (GO:0006412)). Contains Ribokinase (Interpro|IPR002139%2C (GO:0006014)). Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173) gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1293 YP_1294 YP1294 fruB fruB 1415955 1417088 - PTS system%2C fructose-specific IIA/fpr component similar to Yersinia pestis CO92 fruB and Yersinia pestis KIM fruB. Contains Phosphocarrier HPr protein (Interpro|IPR000032%2C (GO:0009401)). Contains Histidine phosphorylation site in HPr protein (Interpro|IPR001020%2C (GO:0009401)). Contains HPr protein%2C serine phosphorylation site (Interpro|IPR002114%2C (GO:0009401)). Contains Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 (Interpro|IPR002178%2C (GO:0009401)) gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1294 YP_1295 YP1295 YP_1295 1417269 1417805 + ADP-ribose pyrophosphatase similar to Yersinia pestis KIM y2888. Contains NUDIX hydrolase (Interpro|IPR000086) gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1295 YP_1296 YP1296 araH5 araH5 1417918 1418916 - putative ABC transport integral membrane subunit similar to Yersinia pestis CO92 YPO1295 and Yersinia pestis KIM y2889. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1296 YP_1297 YP1297 mglA3 mglA3 1418952 1420526 - putative ABC transport ATP-binding subunit similar to Yersinia pestis CO92 YPO1294 and Yersinia pestis KIM y2890. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1297 YP_1298 YP1298 rbsB4 rbsB4 1420635 1421723 - putative periplasmic carbohydrate-binding transport protein similar to Yersinia pestis CO92 YPO1293 and Yersinia pestis KIM y2891. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311) gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1298 YP_1299 YP1299 rpiA1 rpiA1 1421863 1422615 - putative ribose 5-phosphate isomerase similar to Yersinia pestis CO92 rpiA and Yersinia pestis KIM y2892. Contains Ribose 5-phosphate isomerase (Interpro|IPR004788%2C (GO:0009052)). Contains Ribose 5-phosphate isomerase (Interpro|IPR004788%2C (GO:0009052)) gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1299 YP_1300 YP1300 xylB1 xylB1 1422593 1424164 - putative carbohydrate kinase similar to Yersinia pestis CO92 YPO1291 and Yersinia pestis KIM y2893. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains Xylulokinase (Interpro|IPR006000%2C (GO:0005997)) gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1300 YP_1301 YP1301 gabD1 gabD1 1424168 1425664 - putative aldehyde dehydrogenase similar to Yersinia pestis CO92 YPO1290 and Yersinia pestis KIM gabD. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1301 YP_1302 YP1302 mhpD1 mhpD1 1426015 1427157 + 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) similar to Yersinia pestis CO92 YPO1289 and Yersinia pestis KIM y2895 gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1302 YP_1303 YP1303 serA1 serA1 1427154 1428119 + putative D-isomer specific 2-hydroxyacid dehydrogenase family protein similar to Yersinia pestis CO92 YPO1288 and Yersinia pestis KIM y2896. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain (Interpro|IPR006139%2C (GO:0006564)%2C (GO:0016616)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain (Interpro|IPR006140%2C (GO:0006564)%2C (GO:0016616)) gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1303 YP_1304 YP1304 fabG4 fabG4 1428130 1428945 + putative short chain oxidoreductase similar to Yersinia pestis CO92 YPO1287 and Yersinia pestis KIM fabG. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Ribosomal protein P2 (Interpro|IPR001859%2C (GO:0006412)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1304 YP_1306 YP1306 mtr mtr 1429625 1430869 + putative tryptophan-specific transport protein similar to Yersinia pestis CO92 mtr and Yersinia pestis KIM mtr. Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)). Contains Amino acid/polyamine transporter%2C family II (Interpro|IPR002422%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1306 YP_1307 YP1307 efp2 efp2 1430904 1431545 + putative elongation factor P similar to Yersinia pestis CO92 YPO1284 and Yersinia pestis KIM y2901. Contains Elongation factor P (EF-P) (Interpro|IPR001059%2C (GO:0006414)). Contains Mitochondrial substrate carrier (Interpro|IPR001993%2C (GO:0006810)) gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1307 YP_1308 YP1308 uxuA uxuA 1431685 1432878 - mannonate dehydratase similar to Yersinia pestis CO92 uxuA and Yersinia pestis KIM uxuA. Contains Mannonate dehydratase (Interpro|IPR004628%2C (GO:0006064)%2C (GO:0008927)) gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1308 YP_1309 YP1309 mtlD1 mtlD1 1433444 1434916 + putative D-mannonate oxidoreductase similar to Yersinia pestis CO92 YPO1280 and Yersinia pestis KIM y2903. Contains Mannitol dehydrogenase (Interpro|IPR000669%2C (GO:0008152)) gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1309 YP_1310 YP1310 uxuR uxuR 1435045 1435806 - putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1279 and Yersinia pestis KIM uxuR. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)) gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1310 YP_1311 YP1311 YP_1311 1435954 1436337 - putative membrane protein similar to Yersinia pestis CO92 YPO1278 and Yersinia pestis KIM y2905. gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1311 YP_1312 YP1312 YP_1312 1436596 1437579 + putative cobalamin synthesis protein similar to Yersinia pestis CO92 YPO1277 and Yersinia pestis KIM y2906. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Cobalamin synthesis protein/P47K (Interpro|IPR003495) gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1312 YP_1313 YP1313 pgpB4 pgpB4 1437638 1438339 + putative membrane protein similar to Yersinia pestis CO92 YPO1276 and Yersinia pestis KIM y2907. Contains PA-phosphatase related phosphoesterase (Interpro|IPR000326) gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1313 YP_1314 YP1314 spr1 spr1 1438781 1439365 + putative lipoprotein similar to Yersinia pestis CO92 spr and Yersinia pestis KIM spr. Contains NLP/P60 (Interpro|IPR000064) gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1314 YP_1315 YP1315 rtn1 rtn1 1440061 1441533 + putative membrane protein similar to Yersinia pestis CO92 YPO1274 and Yersinia pestis KIM rtn. Contains EAL domain (Interpro|IPR001633%2C (GO:0005554)). Contains Blood group Rhesus C/E and D polypeptide (Interpro|IPR002229) gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1315 YP_1316 YP1316 oppA2 oppA2 1441615 1443423 + putative substrate-binding transport protein similar to Yersinia pestis CO92 YPO1273 and Yersinia pestis KIM y2910. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)) gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1316 YP_1317 YP1317 dppB2 dppB2 1443433 1444533 + putative ABC transporter integral membrane subunit similar to Yersinia pestis CO92 YPO1272 and Yersinia pestis KIM y2911. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1317 YP_1318 YP1318 dppC2 dppC2 1444539 1445561 + putative ABC transporter integral membrane subunit similar to Yersinia pestis CO92 YPO1271 and Yersinia pestis KIM y2912. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1318 YP_1319 YP1319 YP_1319 1445563 1447155 + putative ABC transporter ATP-binding subunit similar to Yersinia pestis CO92 YPO1270 and Yersinia pestis KIM y2913. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1319 YP_1320 YP1320 YP_1320 1447216 1447560 - hypothetical protein similar to Yersinia pestis CO92 YPO1269 and Yersinia pestis KIM y2914. gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1320 YP_1321 YP1321 bcr bcr 1448545 1449744 - putative drug resistance translocator protein similar to Yersinia pestis CO92 bcr and Yersinia pestis KIM bcr. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Drug resistance transporter Bcr/CflA subfamily (Interpro|IPR004812%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1321 YP_1322 YP1322 rsuA1 rsuA1 1449863 1450570 - ribosomal small subunit pseudouridine synthase A similar to Yersinia pestis CO92 rsuA and Yersinia pestis KIM rsuA. Contains Pseudouridine synthase%2C Rsu (Interpro|IPR000748%2C (GO:0004730)). Contains RNA-binding S4 (Interpro|IPR002942%2C (GO:0003723)). Contains Pseudouridine synthase (Interpro|IPR006145) gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1322 YP_1323 YP1323 sSL2 sSL2 1451084 1452841 + putative DEAD box helicase family protein similar to Yersinia pestis CO92 YPO1265 and Yersinia pestis KIM y2919. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)) gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1323 YP_1324 YP1324 rplY rplY 1453003 1453287 + 50S ribosomal protein L25 similar to Yersinia pestis CO92 rplY and Yersinia pestis KIM rplY. Contains Ribosomal protein L25 (Interpro|IPR001021%2C (GO:0008097)) gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1324 YP_1325 YP1325 tnp_17 tnp_17 1453426 1453935 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase IS200-like (Interpro|IPR002686). gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1325 YP_1326 YP1326 ompA1 ompA1 1454074 1455135 - putative outer membrane porin A protein similar to Yersinia pestis CO92 ompA and Yersinia pestis KIM ompA. Contains OmpA-like transmembrane domain (Interpro|IPR000498). Contains MotY protein (Interpro|IPR001035%2C (GO:0001539)%2C (GO:0009288)). Contains OmpA outer membrane protein (Interpro|IPR002368%2C (GO:0016021)). Contains Bacterial outer membrane protein (Interpro|IPR006664). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1326 YP_1327 YP1327 sulA sulA 1455493 1455999 - putative cell division inhibitor similar to Yersinia pestis CO92 sulA and Yersinia pestis KIM sulA. Contains Cell division inhibitor SulA (Interpro|IPR004596%2C (GO:0019866)) gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1327 YP_1328 YP1328 tfoX tfoX 1456141 1456863 + Regulator of competence-specific genes similar to Yersinia pestis CO92 YPO1437 and Yersinia pestis KIM y2733. Contains TfoX%2C N-terminal (Interpro|IPR007076). Contains TfoX%2C C-terminal (Interpro|IPR007077) gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1328 YP_1329 YP1329 YP_1329 1456965 1459103 - putative membrane protein similar to Yersinia pestis CO92 YPO1438 and Yersinia pestis KIM y2732. Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)) gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1329 YP_1330 YP1330 YP_1330 1459133 1459579 - putative membrane protein similar to Yersinia pestis CO92 YPO1439 and Yersinia pestis KIM y2731. Contains Protein of unknown function DUF307 (Interpro|IPR005185) gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1330 YP_1331 YP1331 helD helD 1459773 1461827 + DNA helicase IV similar to Yersinia pestis KIM helD. Contains UvrD/REP helicase (Interpro|IPR000212%2C (GO:0006281)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1331 YP_1332 YP1332 mgsA mgsA 1461888 1462352 - methylglyoxal synthase similar to Yersinia pestis CO92 mgsA and Yersinia pestis KIM mgsA. Contains Methylglyoxal synthase-like domain (Interpro|IPR004362%2C (GO:0008152)). Contains Methylglyoxal synthase (Interpro|IPR004363%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0019242)) gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1332 YP_1333 YP1333 YP_1333 1462531 1463211 - putative exported protein similar to Yersinia pestis CO92 YPO1442 and Yersinia pestis KIM y2728 gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1333 YP_1334 YP1334 YP_1334 1463527 1463943 + putative CoA-binding protein similar to Yersinia pestis CO92 YPO1443 and Yersinia pestis KIM y2727. Contains CoA Binding Domain (Interpro|IPR003781) gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1334 YP_1335 YP1335 YP_1335 1464052 1464369 - hypothetical protein similar to Yersinia pestis CO92 YPO1444 and Yersinia pestis KIM y2726. gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1335 YP_1336 YP1336 YP_1336 1464430 1465620 - putative SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO1445 and Yersinia pestis KIM y2725. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230). Contains PUA domain (Interpro|IPR002478%2C (GO:0003723)) gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1336 YP_1337 YP1337 acyP acyP 1465708 1465992 + Acylphosphatases similar to Yersinia pestis KIM y2724. Contains Acylphosphatase (Interpro|IPR001792%2C (GO:0003998)) gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1337 YP_1338 YP1338 dsrC dsrC 1466044 1466373 - putative sulfite reductase similar to Yersinia pestis KIM y2723 gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1338 YP_1339 YP1339 YP_1339 1467103 1467408 + putative transposase similar to Yersinia pestis KIM y2720. gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1339 YP_1340 YP1340 YP_1340 1467772 1471545 + similar to Yersinia pseudotuberculosis cnf. CDS contains a nonsense mutation in codon 121 and a frameshift mutation following codon 214 and it is also disrupted by the insertion of IS100 pseudogene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1340 YP_1341 YP1341 YP_1341 1469227 1470249 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1341 YP_1342 YP1342 dnaC_11 dnaC_11 1470249 1471028 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1342 YP_1343 YP1343 glcD2 glcD2 1471979 1474408 - putative oxidoreductase similar to Yersinia pestis KIM y2718. Contains WW/Rsp5/WWP domain (Interpro|IPR001202). Contains Oxygen oxidoreductase covalent FAD-binding site (Interpro|IPR006093%2C (GO:0008246)). Contains FAD linked oxidase%2C N-terminal (Interpro|IPR006094%2C (GO:0008246)) gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1343 YP_1344 YP1344 fabG5 fabG5 1474550 1475296 - putative short chain dehydrogenase similar to Yersinia pestis CO92 YPO1452 and Yersinia pestis KIM fabG. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Ribosomal protein P2 (Interpro|IPR001859%2C (GO:0006412)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1344 YP_1345 YP1345 YP_1345 1475925 1476245 + hypothetical protein similar to Yersinia pestis CO92 YPO1453 and Yersinia pestis KIM y2716 gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1345 YP_1346 YP1346 fabZ1 fabZ1 1476509 1477033 + putative myristoyl-acyl carrier dehydratase similar to Yersinia pestis KIM fabZ. Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824)). Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824)) gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1346 YP_1347 YP1347 fabF3 fabF3 1477023 1478306 + putative beta-ketoacyl-[acyl-carrier-protein] synthase similar to Yersinia pestis CO92 YPO1455 and Yersinia pestis KIM fabF. Contains Protein kinase (Interpro|IPR000719%2C (GO:0006468)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)) gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1347 YP_1348 YP1348 fabG6 fabG6 1478254 1479045 + putative beta-ketoacyl-[acyl-carrier-protein] reductase similar to Yersinia pestis CO92 YPO1456 and Yersinia pestis KIM fabG. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Ribosomal protein P2 (Interpro|IPR001859%2C (GO:0006412)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1348 YP_1349 YP1349 pksG pksG 1479061 1480299 + putative hydroxymethylglutaryl-coenzyme A synthase similar to Yersinia pestis CO92 YPO1457 and Yersinia pestis KIM pksG. Contains Hydroxymethylglutaryl-coenzyme A synthase (Interpro|IPR000590%2C (GO:0006084)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1349 YP_1350 YP1350 caiD1 caiD1 1480241 1481011 + putative enoyl-CoA hydratase similar to Yersinia pestis CO92 YPO1458 and Yersinia pestis KIM y2711. Contains Enoyl-CoA hydratase/isomerase (Interpro|IPR001753%2C (GO:0008152)) gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1350 YP_1351 YP1351 caiD2 caiD2 1480989 1481765 + putative polyketide biosynthesis enoyl-coa hydratase similar to Yersinia pestis KIM y2710. Contains Enoyl-CoA hydratase/isomerase (Interpro|IPR001753%2C (GO:0008152)) gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1351 YP_1352 YP1352 fabG7 fabG7 1481768 1482556 + putative short chain dehydrogenase similar to Yersinia pestis CO92 YPO1460 and Yersinia pestis KIM y2709. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1352 YP_1353 YP1353 YP_1353 1482595 1483083 + hypothetical protein similar to Yersinia pestis CO92 YPO1461 and Yersinia pestis KIM y2708 gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1353 YP_1354 YP1354 acpP1 acpP1 1483121 1483369 + putative acyl carrier protein similar to Yersinia pestis CO92 YPO1462. Contains Phosphopantetheine-binding domain (Interpro|IPR006163) gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1354 YP_1355 YP1355 fabD1 fabD1 1483468 1484316 + putative acyl transferase similar to Yersinia pestis CO92 YPO1463 and Yersinia pestis KIM y2707. Contains Acyl transferase domain (Interpro|IPR001227%2C (GO:0008152)%2C (GO:0016740)) gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1355 YP_1356 YP1356 YP_1356 1485302 1485805 + hypothetical protein similar to Yersinia pestis CO92 YPO1465 and Yersinia pestis KIM y3369. gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1356 YP_1357 YP1357 YP_1357 1485848 1487392 + hypothetical protein similar to Yersinia pestis CO92 YPO0977 and Yersinia pestis KIM y3368 gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1357 YP_1358 YP1358 YP_1358 1487404 1488756 + hypothetical protein similar to Yersinia pestis CO92 YPO0976 and Yersinia pestis KIM y2704 gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1358 YP_1359 YP1359 YP_1359 1488753 1489439 + putative membrane protein similar to Yersinia pestis CO92 YPO1468 and Yersinia pestis KIM y3366. Contains Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin (Interpro|IPR001248%2C (GO:0016020)) gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1359 YP_1360 YP1360 ompA2 ompA2 1489439 1491175 + putative exported protein similar to Yersinia pestis CO92 YPO1469. Contains Proline-rich region (Interpro|IPR000694). Contains Bacterial outer membrane protein (Interpro|IPR006664). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1360 YP_1361 YP1361 hcp3 hcp3 1491179 1491670 + Hemolysin-coregulated protein (uncharacterized) similar to Yersinia pestis CO92 YPO1470 and Yersinia pestis KIM y3363 gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1361 YP_1362 YP1362 clpA2 clpA2 1492058 1494700 + putative ATPase subunit of ATP-dependent protease similar to Yersinia pestis CO92 YPO1471. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)) gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1362 YP_1363 YP1363 vgrG1 vgrG1 1494703 1497051 + Phage late control gene D protein (GPD) similar to Yersinia pestis CO92 YPO1472. Contains Rhs element Vgr protein (Interpro|IPR006533) gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1363 YP_1364 YP1364 YP_1364 1497067 1499367 + hypothetical protein similar to Yersinia pestis CO92 YPO1473. Contains Protein kinase (Interpro|IPR000719%2C (GO:0006468)) gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1364 YP_1365 YP1365 uvrA2 uvrA2 1499364 1500137 + putative exported protein similar to Yersinia pestis CO92 YPO1474 and Yersinia pestis KIM y2696 gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1365 YP_1366 YP1366 mdlB3 mdlB3 1500291 1500551 + ABC-type multidrug/protein/lipid transport system%2C ATPase component similar to Yersinia pestis CO92 YPO1475 and Yersinia pestis KIM y2695 gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1366 YP_1367 YP1367 YP_1367 1500567 1502750 + hypothetical protein similar to Yersinia pestis CO92 YPO1476. Contains TPR repeat (Interpro|IPR001440) gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1367 YP_1368 YP1368 YP_1368 1502923 1503393 + hypothetical protein similar to Yersinia pestis CO92 YPO1477 and Yersinia pestis KIM y2692. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1368 YP_1369 YP1369 YP_1369 1504126 1504446 - putative transposase similar to Yersinia pestis KIM y2690. gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1369 YP_1370 YP1370 YP_1370 1505669 1506790 + hypothetical protein similar to Yersinia pestis CO92 YPO1481 and similar to Yersinia pestis KIM y2689 (residues 1 to 373 of 373 are similar to residues 48 to 410 of 410 from Yersinia pestis KIM y2689) gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1370 YP_1371 YP1371 icmF1 icmF1 1506787 1510209 + putative membrane protein similar to Yersinia pestis CO92 YPO1482 and Yersinia pestis KIM y2688. Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)) gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1371 YP_1372 YP1372 YP_1372 1510253 1511853 + similar to gi|22126566|ref|NP_669989.1| (NC_004088)hypothetical protein [Yersinia pestis] and gi|15979524|emb|CAC90305.1| (AJ414148)hypothetical [Yersinia pestis KIM](533 aa). There is a frameshift after codon 155. The sequence has been checked and is believed to be correct. pseudogene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1372 YP_1373 YP1373 YP_1373 1511844 1512929 + hypothetical protein similar to Yersinia pestis CO92 YPO1484 gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1373 YP_1374 YP1374 YP_1374 1512929 1513399 + hypothetical protein similar to Yersinia pestis CO92 YPO1484a and Yersinia pestis KIM y2685 gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1374 YP_1375 YP1375 YP_1375 1513620 1515383 + hypothetical protein similar to Yersinia pestis CO92 YPO1485 and Yersinia pestis KIM y2684 gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1375 YP_1376 YP1376 YP_1376 1515347 1516432 + hypothetical protein similar to Yersinia pestis CO92 YPO1486 and Yersinia pestis KIM y2683 gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1376 YP_1377 YP1377 YP_1377 1516407 1516988 + hypothetical protein similar to Yersinia pestis CO92 YPO1487 and Yersinia pestis KIM y2682. gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1377 YP_1378 YP1378 YP_1378 1516988 1517440 + hypothetical protein similar to Yersinia pestis CO92 YPO1488 gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1378 YP_1379 YP1379 YP_1379 1517465 1518832 + hypothetical protein similar to Yersinia pestis CO92 YPO1489 and Yersinia pestis KIM y2679 gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1379 YP_1380 YP1380 YP_1380 1519044 1519667 - hypothetical protein similar to Yersinia pestis CO92 YPO1490 and Yersinia pestis KIM y2678 gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1380 YP_1381 YP1381 uup3 uup3 1520182 1521945 + putative ATP-binding component of ABC transport system similar to Yersinia pestis KIM y2677. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1381 YP_1382 YP1382 YP_1382 1522173 1522817 + hypothetical protein similar to Yersinia pestis CO92 YPO1492 and Yersinia pestis KIM y2676. gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1382 YP_1383 YP1383 YP_1383 1522839 1524047 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1383 YP_1384 YP1384 moeB moeB 1524214 1525014 - molybdopterin biosynthesis protein similar to Yersinia pestis CO92 moeB and Yersinia pestis KIM moeB. Contains NAD binding site (Interpro|IPR000205). Contains UBA/THIF-type NAD/FAD binding fold (Interpro|IPR000594%2C (GO:0003824)). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)) gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1384 YP_1385 YP1385 moeA moeA 1524986 1526260 - molybdopterin biosynthesis protein similar to Yersinia pestis CO92 moeA and Yersinia pestis KIM moeA. Contains Molybdenum cofactor biosynthesis protein (Interpro|IPR001453%2C (GO:0006777)). Contains MoeA N-terminal region%2C domain I and II (Interpro|IPR005110). Contains MoeA C-terminal%2C domain IV (Interpro|IPR005111) gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1385 YP_1386 YP1386 aslB1 aslB1 1526795 1528105 - putative heme-binding protein similar to Yersinia pestis CO92 YPO1496 and Yersinia pestis KIM y2672. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains WW/Rsp5/WWP domain (Interpro|IPR001202) gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1386 YP_1387 YP1387 phnL3 phnL3 1528115 1528783 - ABC transporter ATP-binding protein similar to Yersinia pestis CO92 YPO1497 and Yersinia pestis KIM y2671. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1387 YP_1388 YP1388 acrA6 acrA6 1528785 1530047 - putative exported protein similar to Yersinia pestis CO92 YPO1498 and Yersinia pestis KIM y2670 gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1388 YP_1389 YP1389 YP_1389 1530049 1532409 - putative membrane protein similar to Yersinia pestis CO92 YPO1499. Contains Protein of unknown function DUF214 (Interpro|IPR003838) gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1389 YP_1390 YP1390 YP_1390 1532493 1532705 - hypothetical protein similar to Yersinia pestis CO92 YPO1500. gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1390 YP_1391 YP1391 YP_1391 1532962 1533804 - putative esterase similar to Yersinia pestis CO92 YPO1501 and Yersinia pestis KIM y2668. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Putative esterase (Interpro|IPR000801) gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1391 YP_1392 YP1392 adhC adhC 1533825 1534964 - putative alcohol dehydrogenase similar to Yersinia pestis CO92 YPO1502 and Yersinia pestis KIM adhC. Contains NAD binding site (Interpro|IPR000205). Contains Zinc-containing alcohol dehydrogenase superfamily (Interpro|IPR002085%2C (GO:0008270)). Contains Zinc-containing alcohol dehydrogenase (Interpro|IPR002328%2C (GO:0008270)) gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1392 YP_1393 YP1393 lysR7 lysR7 1535238 1536107 - putative LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1503 and Yersinia pestis KIM y2666. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1393 YP_1394 YP1394 proP13 proP13 1536243 1537394 + putative exported protein similar to Yersinia pestis CO92 YPO1504 and Yersinia pestis KIM gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1394 YP_1395 YP1395 folE folE 1537578 1538240 + GTP cyclohydrolase I similar to Yersinia pestis CO92 folE and Yersinia pestis KIM folE. Contains GTP cyclohydrolase I (Interpro|IPR001474%2C (GO:0009058)) gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1395 YP_1396 YP1396 YP_1396 1538295 1539461 + putative exported protein similar to Yersinia pestis CO92 YPO1506 gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1396 YP_1397 YP1397 mglB mglB 1540098 1541201 + galactose-binding protein similar to Yersinia pestis CO92 mglB and Yersinia pestis KIM mglB. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1397 YP_1398 YP1398 mglA4 mglA4 1541431 1542951 + galactoside transport ATP-binding protein similar to Yersinia pestis CO92 mglA and Yersinia pestis KIM mglA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1398 YP_1399 YP1399 mglC mglC 1542972 1543982 + galactoside permease similar to Yersinia pestis CO92 mglC and similar to Yersinia pestis KIM mglC (residues 1 to 336 of 336 are similar to residues 5 to 341 of 341 from Yersinia pestis KIM mglC). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1399 YP_1400 YP1400 sanA sanA 1544427 1545164 - putative exported protein similar to Yersinia pestis CO92 YPO1510 and Yersinia pestis KIM sanA gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1400 YP_1401 YP1401 sfcA1 sfcA1 1545445 1547142 - NAD-dependent malic enzyme similar to Yersinia pestis CO92 sfcA and Yersinia pestis KIM sfcA. Contains Malic oxidoreductase (Interpro|IPR001891%2C (GO:0006108)) gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1401 YP_1402 YP1402 cdd cdd 1547498 1548382 - cytidine deaminase similar to Yersinia pestis CO92 cdd and Yersinia pestis KIM cdd. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Cytidine/deoxycytidylate deaminase%2C zinc-binding region (Interpro|IPR002125%2C (GO:0016787)). Contains Cytidine deaminase%2C homodimeric (Interpro|IPR006263) gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1402 YP_1403 YP1403 lrgB lrgB 1548708 1549403 - putative membrane protein similar to Yersinia pestis CO92 YPO1513 and Yersinia pestis KIM y2655. Contains Conserved hypothetical protein 659 (Interpro|IPR005261) gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1403 YP_1404 YP1404 YP_1404 1549400 1549846 - putative membrane protein similar to Yersinia pestis CO92 YPO1514 and Yersinia pestis KIM y2654. Contains LrgA family (Interpro|IPR005538%2C (GO:0016021)) gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1404 YP_1405 YP1405 ydeF ydeF 1550049 1551230 - putative multidrug resistance protein similar to Yersinia pestis CO92 YPO1515 and Yersinia pestis KIM ydeF. Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1405 YP_1406 YP1406 YP_1406 1551544 1552800 - hypothetical protein similar to Yersinia pestis CO92 YPO1516 and Yersinia pestis KIM y2652. gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1406 YP_1407 YP1407 rbsB5 rbsB5 1552815 1553906 - putative sugar ABC transporter similar to Yersinia pestis CO92 YPO1517 and Yersinia pestis KIM y2651 gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1407 YP_1408 YP1408 YP_1408 1554724 1555251 + putative membrane protein similar to Yersinia pestis CO92 YPO1518. gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1408 YP_1409 YP1409 YP_1409 1555291 1555479 + hypothetical protein no significant database match found gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1409 YP_1410 YP1410 tnp_18 tnp_18 1555469 1555927 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp. Contains Transposase IS200-like (Interpro|IPR002686). gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1410 YP_1411 YP1411 metG metG 1556091 1558118 - methionyl-tRNA synthetase similar to Yersinia pestis CO92 metG and Yersinia pestis KIM metG. Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Aminoacyl-tRNA synthetase%2C class Ia (Interpro|IPR002300%2C (GO:0006418)). Contains Methionyl-tRNA synthetase%2C class Ia (Interpro|IPR002304%2C (GO:0006431)). Contains t-RNA-binding region (Interpro|IPR002547%2C (GO:0000049)). Contains Methionyl-tRNA synthetase%2C beta subunit%2C C-terminal (Interpro|IPR004495%2C (GO:0006412)) gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1411 YP_1412 YP1412 mrp mrp 1558383 1559495 + ATPase similar to Yersinia pestis CO92 YPO1523 and Yersinia pestis KIM mrp. Contains Mrp family (Interpro|IPR000808%2C (GO:0005554)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1412 YP_1413 YP1413 udk udk 1559701 1560381 + uridine kinase similar to Yersinia pestis CO92 udk and Yersinia pestis KIM udk. Contains Uridine kinase (Interpro|IPR000764%2C (GO:0006224)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)). Contains Phosphoribulokinase/uridine kinase (Interpro|IPR006083%2C (GO:0016301)) gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1413 YP_1414 YP1414 dcd2 dcd2 1560459 1561067 + 2'-deoxycytidine 5'-triphosphate deaminase similar to Yersinia pestis KIM dcd. Contains Alkaline phosphatase (Interpro|IPR001952%2C (GO:0008152)%2C (GO:0016302)). Contains Pyridoxal-dependent decarboxylase (Interpro|IPR002129%2C (GO:0006520)%2C (GO:0016831)). Contains DeoxyUTP pyrophosphatase (Interpro|IPR001428%2C (GO:0006399)). Contains dCTP Deaminase (Interpro|IPR003232) gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1414 YP_1415 YP1415 asmA1 asmA1 1561356 1563110 + putative exported protein similar to Yersinia pestis CO92 YPO1526 and Yersinia pestis KIM asmA. gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1415 YP_1416 YP1416 YP_1416 1563255 1564841 - putative membrane protein similar to Yersinia pestis CO92 YPO1527. Contains CBS domain (Interpro|IPR000644). Contains Transporter associated domain (Interpro|IPR005170). Contains Integral membrane protein TerC family (Interpro|IPR005496) gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1416 YP_1417 YP1417 ysuF ysuF 1565283 1566062 + putative ferric iron reductase similar to Yersinia pestis CO92 YPO1528 and Yersinia pestis KIM ysuF. gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1417 YP_1418 YP1418 ysuJ ysuJ 1566214 1567761 + putative decarboxylase similar to Yersinia pestis CO92 YPO1529 and Yersinia pestis KIM ysuJ. Contains Pyridoxal-dependent decarboxylase (Interpro|IPR002129%2C (GO:0006520)%2C (GO:0016831)) gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1418 YP_1419 YP1419 alcA alcA 1567796 1569094 + putative siderophore biosynthetic enzyme similar to Yersinia pestis CO92 alcA and Yersinia pestis KIM ysuI gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1419 YP_1420 YP1420 alcB alcB 1569127 1569672 + putative siderophore biosynthetic enzyme similar to Yersinia pestis CO92 alcB and Yersinia pestis KIM ysuH. gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1420 YP_1421 YP1421 ysuG ysuG 1569624 1571513 + putative siderophore biosynthetic enzyme similar to Yersinia pestis CO92 YPO1532 and Yersinia pestis KIM ysuG. gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1421 YP_1422 YP1422 ysuD ysuD 1571622 1572470 - putative iron-siderophore transport system%2C ATP-binding component similar to Yersinia pestis CO92 YPO1533 and Yersinia pestis KIM ysuD. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1422 YP_1423 YP1423 ysuC ysuC 1572467 1573507 - putative iron-siderophore transport system%2C membrane permease component similar to Yersinia pestis CO92 YPO1534 and Yersinia pestis KIM ysuC. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1423 YP_1424 YP1424 ysuB ysuB 1573494 1574534 - putative iron-siderophore transport system%2C transmembrane component similar to Yersinia pestis CO92 YPO1535 and Yersinia pestis KIM ysuB. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)) gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1424 YP_1425 YP1425 ysuA ysuA 1574531 1575649 - putative iron-siderophore transport system%2C periplasmic binding protein similar to Yersinia pestis CO92 YPO1536 and Yersinia pestis KIM ysuA. Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1425 YP_1426 YP1426 ysuR ysuR 1575700 1577961 - putative iron-siderophore receptor similar to Yersinia pestis CO92 YPO1537 and Yersinia pestis KIM ysuR. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1426 YP_1427 YP1427 YP_1427 1578174 1579988 - putative siderophore biosynthetic enzyme similar to Yersinia pestis CO92 YPO1538 gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1427 YP_1428 YP1428 galU1 galU1 1580934 1581824 + UTP-glucose-1-phosphate uridylyltransferase similar to Yersinia pestis CO92 galU and Yersinia pestis KIM galU. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains UTP-glucose-1-phosphate uridylyltransferase (Interpro|IPR005771%2C (GO:0006011)). Contains Nucleotidyl transferase (Interpro|IPR005835%2C (GO:0009058)%2C (GO:0016779)) gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1428 YP_1429 YP1429 galF galF 1581908 1582801 + UTP-glucose-1-phosphate uridylyltransferase similar to Yersinia pestis CO92 galF and Yersinia pestis KIM galF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains UTP-glucose-1-phosphate uridylyltransferase (Interpro|IPR005771%2C (GO:0006011)). Contains Nucleotidyl transferase (Interpro|IPR005835%2C (GO:0009058)%2C (GO:0016779)) gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1429 YP_1430 YP1430 gnd gnd 1583187 1584596 + 6-phosphogluconate dehydrogenase%2C decarboxylating similar to Yersinia pestis CO92 gnd and Yersinia pestis KIM gnd. Contains 6-phosphogluconate dehydrogenase%2C decarboxylating (Interpro|IPR006113%2C (GO:0006098)). Contains 6-phosphogluconate dehydrogenase%2C C-terminal (Interpro|IPR006114%2C (GO:0006098)). Contains 6-phosphogluconate dehydrogenase%2C NAD binding domain (Interpro|IPR006115%2C (GO:0006098)). Contains 6-phosphogluconate dehydrogenase (Interpro|IPR006183%2C (GO:0006098)). Contains 6-phosphogluconate dehydrogenase domain (Interpro|IPR006184%2C (GO:0006098)) gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1430 YP_1431 YP1431 hisI hisI 1584796 1585410 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase similar to Yersinia pestis CO92 hisI and Yersinia pestis KIM hisI. Contains Phosphoribosyl-AMP cyclohydrolase (Interpro|IPR002496%2C (GO:0000105)%2C (GO:0004635)). Contains Phosphoribosyl-ATP pyrophosphohydrolase (Interpro|IPR002497%2C (GO:0000105)%2C (GO:0004636)) gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1431 YP_1432 YP1432 hisF hisF 1585404 1586180 - histidine biosynthesic protein (cyclase) similar to Yersinia pestis CO92 hisF and Yersinia pestis KIM hisF. Contains FMN/related compound-binding core (Interpro|IPR003009). Contains Histidine biosynthesis protein HisF (Interpro|IPR004651%2C (GO:0000105)%2C (GO:0009382)). Contains Histidine biosynthesis protein (Interpro|IPR006062%2C (GO:0000105)) gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1432 YP_1433 YP1433 hisA hisA 1586162 1586899 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase similar to Yersinia pestis CO92 hisA and Yersinia pestis KIM hisA. Contains FMN/related compound-binding core (Interpro|IPR003009). Contains Histidine biosynthesis protein (Interpro|IPR006062%2C (GO:0000105)). Contains Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (Interpro|IPR006063%2C (GO:0000105)%2C (GO:0003949)) gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1433 YP_1434 YP1434 hisH hisH 1586905 1587495 - amidotransferase similar to Yersinia pestis CO92 hisH and Yersinia pestis KIM hisH. Contains Glutamine amidotransferase class-I (Interpro|IPR000991%2C (GO:0003824)). Contains Anthranilate synthase component II/delta crystallin (Interpro|IPR006220) gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1434 YP_1435 YP1435 hisB1 hisB1 1587495 1588562 - histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase similar to Yersinia pestis CO92 hisB and Yersinia pestis KIM hisB. Contains Imidazoleglycerol-phosphate dehydratase (Interpro|IPR000807%2C (GO:0000105)%2C (GO:0004424)). Contains Histidinol-phosphatase (Interpro|IPR005954%2C (GO:0000105)%2C (GO:0005737)). Contains Histidinol-phosphate phosphatase (Interpro|IPR006543). Contains HAD-superfamily hydrolase%2C IIIA domain (Interpro|IPR006549) gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1435 YP_1436 YP1436 hisC hisC 1588559 1589707 - histidinol-phosphate aminotransferase similar to Yersinia pestis CO92 hisC and Yersinia pestis KIM hisC. Contains 1-aminocyclopropane-1-carboxylate synthase (Interpro|IPR001176%2C (GO:0009058)%2C (GO:0016847)). Contains Aminotransferase%2C class-II (Interpro|IPR001917%2C (GO:0008152)%2C (GO:0016740)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)). Contains Histidinol-phosphate aminotransferase (Interpro|IPR005861%2C (GO:0000105)%2C (GO:0004400)) gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1436 YP_1437 YP1437 hisD hisD 1589710 1591041 - histidinol dehydrogenase similar to Yersinia pestis CO92 hisD and Yersinia pestis KIM hisD. Contains Histidinol dehydrogenase (Interpro|IPR001692%2C (GO:0000105)%2C (GO:0004399)) gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1437 YP_1438 YP1438 hisG hisG 1591045 1591944 - ATP phosphoribosyltransferase similar to Yersinia pestis CO92 hisG and Yersinia pestis KIM hisG. Contains ATP phosphoribosyltransferase (Interpro|IPR001348%2C (GO:0000105)%2C (GO:0003879)) gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1438 YP_1439 YP1439 YP_1439 1592034 1592258 + hypothetical protein similar to Yersinia pestis CO92 YPO1550 gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1439 YP_1440 YP1440 wcaG4 wcaG4 1592650 1593477 + putative exported protein similar to Yersinia pestis CO92 YPO1551 and Yersinia pestis KIM y2617. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1440 YP_1441 YP1441 YP_1441 1593632 1594066 - putative exported protein similar to Yersinia pestis CO92 YPO1552 gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1441 YP_1442 YP1442 araH6 araH6 1594311 1595306 - ribose transport system%2C permease protein similar to Yersinia pestis CO92 YPO1553 and Yersinia pestis KIM y2615. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1442 YP_1443 YP1443 YP_1443 1595303 1596843 - similar to gi|15834327|ref|NP_313100.1| (NC_002695) putative ATP-binding component of sugar ABC transporter [Escherichia coli O157:H7] (len:506 aa).There is a frameshift after codon 282. The sequence has been checked and is believed to be correct. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) pseudogene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1443 YP_1444 YP1444 gldA gldA 1597129 1598220 + putative dehydrogenase similar to Yersinia pestis CO92 YPO1556. Contains Iron-containing alcohol dehydrogenase (Interpro|IPR001670%2C (GO:0016491)) gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1444 YP_1445 YP1445 potE2 potE2 1598680 1600071 + Amino acid permease similar to Yersinia pestis CO92 YPO1557 and Yersinia pestis KIM y2612. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1445 YP_1446 YP1446 sbcB sbcB 1600688 1602118 - exodeoxyribonuclease I similar to Yersinia pestis CO92 YPO1558. Contains Exonuclease (Interpro|IPR006055%2C (GO:0005622)) gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1446 YP_1447 YP1447 wcaG5 wcaG5 1602381 1603520 + Nucleoside-diphosphate-sugar epimerases similar to Yersinia pestis CO92 YPO1559 and Yersinia pestis KIM y2608. gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1447 YP_1448 YP1448 YP_1448 1603954 1604271 + hypothetical protein similar to Yersinia pestis CO92 YPO1560 gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1448 YP_1449 YP1449 YP_1449 1604415 1607645 - similar to Yersinia pestis KIM y2605. Contains a nonsense mutation at codon 957. The sequence has been checked and is believed to be correct. pseudogene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1449 YP_1450 YP1450 YP_1450 1608315 1608509 - hypothetical protein similar to Yersinia pestis KIM y2603. gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1450 YP_1451 YP1451 proP14 proP14 1608575 1609975 + putative transmembrane transporter similar to Yersinia pestis CO92 YPO1563 and Yersinia pestis KIM y2602. Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1451 YP_1452 YP1452 YP_1452 1609984 1610472 - putative membrane protein similar to Yersinia pestis CO92 YPO1564 and Yersinia pestis KIM y2601. gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1452 YP_1453 YP1453 ucpA ucpA 1610834 1611574 + putative oxidoreductase similar to Yersinia pestis CO92 YPO1565 and Yersinia pestis KIM ucpA. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1453 YP_1454 YP1454 mhpD2 mhpD2 1611622 1612464 + putative hydrolase similar to Yersinia pestis CO92 YPO1566 and Yersinia pestis KIM y2599. Contains Fumarylacetoacetate (FAA) hydrolase (Interpro|IPR002529%2C (GO:0008152)) gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1454 YP_1455 YP1455 dgoA1 dgoA1 1612496 1613773 + O-succinylbenzoate synthase-related enzymes similar to Yersinia pestis KIM y2598. Contains Mandelate racemase/muconate lactonizing enzyme (Interpro|IPR001354%2C (GO:0008152)) gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1455 YP_1456 YP1456 YP_1456 1613852 1614025 + hypothetical protein similar to Yersinia pestis CO92 YPO1568 gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1456 YP_1457 YP1457 lldD lldD 1614070 1615215 + L-lactate dehydrogenase similar to Yersinia pestis CO92 lldD and Yersinia pestis KIM lldD. Contains FMN-dependent alpha-hydroxy acid dehydrogenase (Interpro|IPR000262%2C (GO:0008246)). Contains FMN/related compound-binding core (Interpro|IPR003009) gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1457 YP_1458 YP1458 argG argG 1615420 1616790 - argininosuccinate synthase similar to Yersinia pestis CO92 argG and Yersinia pestis KIM argG. Contains Argininosuccinate synthase (Interpro|IPR001518%2C (GO:0006526)) gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1458 YP_1459 YP1459 norM1 norM1 1617081 1618511 + putative sugar transporter similar to Yersinia pestis CO92 YPO1571 and Yersinia pestis KIM y2593. Contains Multi antimicrobial extrusion (MatE) protein (Interpro|IPR002528) gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1459 YP_1460 YP1460 proP15 proP15 1618539 1619918 - putative sugar transporter similar to Yersinia pestis CO92 YPO1572 and Yersinia pestis KIM y2592. Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1460 YP_1461 YP1461 cDA11 cDA11 1619915 1620832 - putative polysaccharide deacetylase similar to Yersinia pestis CO92 YPO1573 and Yersinia pestis KIM y2591. Contains Polysaccharide deacetylase (Interpro|IPR002509%2C (GO:0005975)%2C (GO:0016810)) gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1461 YP_1462 YP1462 YP_1462 1621373 1622068 + putative exported protein similar to Yersinia pestis CO92 YPO1574 and Yersinia pestis KIM y2590 gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1462 YP_1463 YP1463 YP_1463 1622185 1622697 + hypothetical protein similar to Yersinia pestis CO92 YPO1575 and similar to Yersinia pestis KIM y2589 (residues 1 to 170 of 170 are similar to residues 10 to 179 of 179 from Yersinia pestis KIM y2589) gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1463 YP_1464 YP1464 uhpA1 uhpA1 1623564 1624193 - putative GerR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1576 and Yersinia pestis KIM uhpA. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1464 YP_1465 YP1465 YP_1465 1624450 1625742 - putative C4-dicarboxylate transporter%2C large subunit similar to Yersinia pestis CO92 YPO1577 and Yersinia pestis KIM y2587. Contains DedA family (Interpro|IPR000252%2C (GO:0016020)). Contains TRAP dicarboxylate transporter- DctM subunit (Interpro|IPR004681) gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1465 YP_1466 YP1466 YP_1466 1625762 1626268 - putative C4-dicarboxylate transporter%2C small subunit similar to Yersinia pestis CO92 YPO1578 and Yersinia pestis KIM y2586. Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)) gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1466 YP_1467 YP1467 dctP dctP 1626392 1627384 - putative C4-dicarboxylate transporter%2C periplasmic protein similar to Yersinia pestis CO92 YPO1579. Contains TRAP dicarboxylate transporter- DctP subunit (Interpro|IPR004682%2C (GO:0030288)) gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1467 YP_1468 YP1468 ybtD ybtD 1627907 1628647 + putative phosphopantetheinyl transferase similar to Yersinia pestis CO92 YPO1580 and Yersinia pestis KIM ybtD. Contains Phosphopantethiene-protein transferase domain (Interpro|IPR004568) gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1468 YP_1469 YP1469 galA galA 1629034 1631214 - alpha-galactosidase similar to Yersinia pestis CO92 YPO1581 and Yersinia pestis KIM y2582. Contains Glycoside hydrolase%2C clan GH-D (Interpro|IPR000111%2C (GO:0005975)). Contains Glycoside hydrolase%2C family 36 (Interpro|IPR002252%2C (GO:0005975)) gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1469 YP_1470 YP1470 lacY lacY 1631238 1632545 - galactoside permease (M protein) similar to Yersinia pestis KIM lacY. Contains Proton/sugar symporter%2C LacY family (Interpro|IPR000576%2C (GO:0016020)) gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1470 YP_1471 YP1471 purR3 purR3 1632593 1633642 + Transcriptional regulators Best Blastp hit %3D gi|22126460|ref|NP_669883.1| (NC_004088) putative transcriptional regulator [Yersinia pestis KIM]%2C gi|21959452|gb|AAM86134.1|AE013859_15 (AE013859) putative transcriptional regulator [Yersinia pestis KIM]%2C(len:295 aa)%3B. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1471 YP_1472 YP1472 YP_1472 1634043 1634855 - hypothetical protein similar to Yersinia pestis CO92 YPO1732 and Yersinia pestis KIM y2576 gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1472 YP_1473 YP1473 YP_1473 1635245 1635544 - hypothetical protein similar to Yersinia pestis CO92 YPO1733 and Yersinia pestis KIM y2575. Contains YCII-related domain (Interpro|IPR005545) gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1473 YP_1474 YP1474 rIO1 rIO1 1635766 1636617 - putative serine/threonine protein kinases similar to Yersinia pestis CO92 YPO1734 and Yersinia pestis KIM y2574. Contains Protein of unknown function RIO1 (Interpro|IPR000687%2C (GO:0005554)). Contains Tyrosine protein kinase (Interpro|IPR001245%2C (GO:0006468)) gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1474 YP_1475 YP1475 mdlB4 mdlB4 1636720 1638438 - putative ABC transporter (ATP-binding protein) similar to Yersinia pestis CO92 YPO1735 and Yersinia pestis KIM y2573. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1475 YP_1476 YP1476 YP_1476 1638870 1639067 + hypothetical protein no significant database match found gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1476 YP_1477 YP1477 YP_1477 1639094 1639258 + putative membrane protein similar to Yersinia pestis CO92 YPO1736 and Yersinia pestis KIM y2571. gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1477 YP_1478 YP1478 araC2 araC2 1639340 1639726 - AraC-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1737 and Yersinia pestis KIM y2570. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1478 YP_1479 YP1479 YP_1479 1640225 1640521 + hypothetical protein similar to Yersinia pestis CO92 YPO1738 and Yersinia pestis KIM y2569. gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1479 YP_1480 YP1480 YP_1480 1640612 1640845 - hypothetical protein similar to Yersinia pestis KIM y2568 gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1480 YP_1481 YP1481 YP_1481 1641422 1641703 + putative exported protein similar to Yersinia pestis CO92 YPO1740 and Yersinia pestis KIM y2567. gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1481 YP_1482 YP1482 YP_1482 1641966 1642265 + hypothetical protein similar to Yersinia pestis CO92 YPO1741 and Yersinia pestis KIM y2566 gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1482 YP_1483 YP1483 YP_1483 1642308 1642619 + hypothetical protein similar to Yersinia pestis CO92 YPO1742 and Yersinia pestis KIM y2565. gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1483 YP_1484 YP1484 aroP2 aroP2 1642732 1644243 + aromatic amino acid transport protein similar to Yersinia pestis CO92 YPO1743 and Yersinia pestis KIM aroP. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)). Contains Hemopexin repeat (Interpro|IPR000585). Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1484 YP_1485 YP1485 crcA crcA 1644548 1645201 - putative exported protein similar to Yersinia pestis CO92 YPO1744 and Yersinia pestis KIM crcA. gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1485 YP_1486 YP1486 cspC2 cspC2 1646308 1646517 + cold shock protein similar to Yersinia pestis CO92 YPO1746. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1486 YP_1487 YP1487 YP_1487 1646608 1647381 - hypothetical protein similar to Yersinia pestis CO92 YPO1747 and Yersinia pestis KIM y2562. Contains Protein of unknown function DUF152 (Interpro|IPR003730) gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1487 YP_1488 YP1488 rrmA rrmA 1647777 1648616 + rRNA (guanine-N1-)-methyltransferase similar to Yersinia pestis CO92 rrmA and Yersinia pestis KIM y2561. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)) gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1488 YP_1489 YP1489 YP_1489 1648838 1649116 - hypothetical protein similar to Yersinia pestis CO92 YPO1749 and Yersinia pestis KIM y2560 gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1489 YP_1490 YP1490 atoS1 atoS1 1649338 1651419 - PAS/PAC domain Best Blastp hit %3D gi|22126440|ref|NP_669863.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|21959431|gb|AAM86114.1|AE013858_4 (AE013858) hypothetical [Yersinia pestis KIM]%2C(len:451 aa)%3B. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains GGDEF (Interpro|IPR000160%2C (GO:0005554)). Contains PAS-associated C-terminal domain (Interpro|IPR000700%2C (GO:0000160)). Contains PAC motif (Interpro|IPR001610%2C (GO:0007165)) gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1490 YP_1491 YP1491 dnaC_12 dnaC_12 1651891 1652673 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1491 YP_1492 YP1492 YP_1492 1652670 1653692 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1492 YP_1494 YP1494 YP_1494 1654170 1654355 + hypothetical protein similar to Yersinia pestis CO92 YPO1898 gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1494 YP_1496 YP1496 YP_1496 1654605 1654946 - ABC-type sugar transport systems%2C ATPase components similar to Yersinia pestis KIM y2413 gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1496 YP_1497 YP1497 malK1 malK1 1654832 1655722 - putative binding-protein-dependent transport system%2C ATP-binding component similar to Yersinia pestis CO92 YPO1896 and Yersinia pestis KIM malK. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains TOBE domain (Interpro|IPR005116) gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1497 YP_1498 YP1498 malG2 malG2 1655747 1656574 - putative binding-protein-dependent transport system%2C inner membrane component similar to Yersinia pestis CO92 YPO1895 and Yersinia pestis KIM y2415. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains SecY protein (Interpro|IPR002208%2C (GO:0009306)%2C (GO:0016020)) gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1498 YP_1499 YP1499 malF3 malF3 1656567 1657427 - putative binding-protein-dependent transport system%2C inner membrane component similar to Yersinia pestis CO92 YPO1894 and Yersinia pestis KIM y2416. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1499 YP_1500 YP1500 ugpB2 ugpB2 1657494 1658762 - putative exported solute-binding protein similar to Yersinia pestis CO92 YPO1893 and Yersinia pestis KIM y2417. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1500 YP_1501 YP1501 mviM2 mviM2 1658792 1659805 - putative oxidoreductase similar to Yersinia pestis CO92 YPO1892 and Yersinia pestis KIM y2418. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)). Contains Oxidoreductase%2C C-terminal (Interpro|IPR004104%2C (GO:0008152)%2C (GO:0016491)) gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1501 YP_1502 YP1502 YP_1502 1659944 1660159 + hypothetical protein no significant database match found gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1502 YP_1503 YP1503 nagC3 nagC3 1660213 1660503 + Transcriptional regulators similar to Yersinia pestis CO92 YPO1891 gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1503 YP_1504 YP1504 phnF2 phnF2 1660473 1661270 - GntR-family putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1890 and Yersinia pestis KIM y2419. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1504 YP_1505 YP1505 YP_1505 1662239 1662673 + hypothetical protein similar to Yersinia pestis CO92 YPO1887 and Yersinia pestis KIM y2422 gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1505 YP_1506 YP1506 YP_1506 1662685 1663254 + putative exported protein similar to Yersinia pestis CO92 YPO1886 and Yersinia pestis KIM y2423 gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1506 YP_1507 YP1507 tnpA_1 tnpA_1 1663672 1664870 - similar to the previously sequenced Yersinia pestis transposase Y1062 or Ypmt1.80C TR:O68779 (EMBL:AF053947)(402 aa)%2C and to Escherichia coli transposase-like protein TnpA TR:Q9F9X3 (EMBL:AF143819) (402 aa). There is a frameshiftafter codon 286. The sequence has been checked and is believed lieved to be correct. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) pseudogene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1507 YP_1508 YP1508 YP_1508 1664918 1665994 - similar to Yersinia pestis KIM y2426%3B the stop conon of this CDS locates in the IS285 element%2C so this CDS is probably a pseudogene. Contains Immunoglobulin/major histocompatibility complex (Interpro|IPR003006) pseudogene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1508 YP_1509 YP1509 YP_1509 1666060 1666350 - hypothetical protein similar to Yersinia pestis CO92 YPO1882 and Yersinia pestis KIM y2427 gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1509 YP_1510 YP1510 YP_1510 1666331 1666603 - hypothetical protein similar to Yersinia pestis KIM y2428 gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1510 YP_1511 YP1511 YP_1511 1666634 1666993 + phage-related protein similar to Yersinia pestis CO92 YPO1881 and Yersinia pestis KIM y2429. Contains Phage-related baseplate assembly protein (Interpro|IPR006807) gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1511 YP_1512 YP1512 YP_1512 1666990 1667289 + phage-related protein similar to Yersinia pestis CO92 YPO1880. Contains GPW/gp25 family (Interpro|IPR007048) gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1512 YP_1513 YP1513 YP_1513 1667306 1667593 + hypothetical protein similar to Yersinia pestis CO92 YPO1879 and Yersinia pestis KIM y2432. gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1513 YP_1514 YP1514 YP_1514 1668028 1668243 + putative membrane protein similar to Yersinia pestis CO92 YPO1878 gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1514 YP_1515 YP1515 YP_1515 1668240 1668545 + hypothetical protein similar to Yersinia pestis CO92 YPO1877 and Yersinia pestis KIM y2433 gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1515 YP_1516 YP1516 YP_1516 1668550 1668804 + putative membrane protein similar to Yersinia pestis CO92 YPO1876 gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1516 YP_1517 YP1517 YP_1517 1668969 1669109 + similar to Yersinia pestis CO92 YPO1875 and Yersinia pestis KIM y2434 pseudogene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1517 YP_1518 YP1518 YP_1518 1669193 1669639 + hypothetical protein similar to Yersinia pestis CO92 YPO1874 and Yersinia pestis KIM y2435. gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1518 YP_1519 YP1519 tnpA_2 tnpA_2 1669711 1670670 + putative transposase similar to Yersinia pestis CO92 tnpA and Yersinia pestis KIM y2436. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) . Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1519 YP_1520 YP1520 hcp4 hcp4 1670890 1671234 + Hemolysin-coregulated protein (uncharacterized) similar to Yersinia pestis CO92 YPO1872 gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1520 YP_1521 YP1521 YP_1521 1671260 1671484 + hypothetical protein similar to Yersinia pestis KIM y2437. gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1521 YP_1522 YP1522 YP_1522 1671889 1672062 - hypothetical protein no significant database match found gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1522 YP_1523 YP1523 YP_1523 1672307 1672453 - hypothetical protein similar to Yersinia pestis CO92 YPO1870 gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1523 YP_1524 YP1524 YP_1524 1672822 1673049 - similar to Yersinia pestis CO92 YPO1869 and Yersinia pestis KIM y2439 pseudogene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1524 YP_1525 YP1525 xerC2 xerC2 1673097 1673675 + Integrase similar to Yersinia pestis CO92 YPO1868. gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1525 YP_1526 YP1526 pgsA2 pgsA2 1674415 1674963 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase similar to Yersinia pestis CO92 pgsA and Yersinia pestis KIM pgsA. Contains CDP-alcohol phosphatidyltransferase (Interpro|IPR000462%2C (GO:0008654)). Contains CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Interpro|IPR004570%2C (GO:0016021)) gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1526 YP_1527 YP1527 uvrC uvrC 1675022 1676875 - excinuclease ABC%2C subunit C similar to Yersinia pestis KIM uvrC. Contains Excinuclease ABC%2C C subunit%2C N-terminal (Interpro|IPR000305%2C (GO:0006281)). Contains Helix-hairpin-helix motif (Interpro|IPR000445%2C (GO:0003677)). Contains Excinuclease ABC%2C C subunit%2C C-terminal (Interpro|IPR001162%2C (GO:0006289)). Contains UvrB/UvrC protein (Interpro|IPR001943%2C (GO:0006289)). Contains Helix-hairpin-helix DNA-binding%2C class 1 (Interpro|IPR003583%2C (GO:0005622)). Contains Excinuclease ABC%2C C subunit (Interpro|IPR004791%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009380)%2C (GO:0009381)). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)) gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1527 YP_1528 YP1528 uvrY uvrY 1676847 1677503 - response regulator protein similar to Yersinia pestis CO92 uvrY and Yersinia pestis KIM uvrY. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1528 YP_1529 YP1529 YP_1529 1678166 1678390 + hypothetical protein similar to Yersinia pestis CO92 YPO1864 gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1529 YP_1530 YP1530 glpM glpM 1678515 1678859 + putative membrane protein required for alginate biosynthesis similar to Yersinia pestis KIM y2444 gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1530 YP_1531 YP1531 YP_1531 1678887 1679141 - putative membrane protein similar to Yersinia pestis CO92 YPO1862 and Yersinia pestis KIM y2445 gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1531 YP_1533 YP1533 YP_1533 1679481 1680032 - attachment invasion locus protein similar to Yersinia pestis CO92 YPO1860 and Yersinia pestis KIM y2446. Contains Virulence-related outer membrane protein (Interpro|IPR000758) gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1533 YP_1534 YP1534 cycA cycA 1681147 1682571 + D-serine/D-alanine/glycine transporter similar to Yersinia pestis CO92 YPO1859 and Yersinia pestis KIM cycA. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1534 YP_1535 YP1535 YP_1535 1682697 1683875 - putative exported protein similar to Yersinia pestis CO92 YPO1858 and Yersinia pestis KIM y2448. Contains Kelch repeat (Interpro|IPR006652) gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1535 YP_1536 YP1536 wrbA wrbA 1684254 1684868 + trp repressor binding protein similar to Yersinia pestis CO92 YPO1857 and Yersinia pestis KIM wrbA. Contains Flavodoxin (Interpro|IPR001226%2C (GO:0006118)%2C (GO:0009457)) gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1536 YP_1537 YP1537 YP_1537 1684954 1686258 - putative iron-dependent peroxidase similar to Yersinia pestis CO92 YPO1856 and Yersinia pestis KIM y2450. Contains Twin-arginine translocation pathway signal (Interpro|IPR006311). Contains Tat-translocated enzyme (Interpro|IPR006313). Contains Dyp-type peroxidase (Interpro|IPR006314) gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1537 YP_1538 YP1538 YP_1538 1686269 1687423 - putative periplasmic lipoprotein involved in iron transport similar to Yersinia pestis KIM y2451 gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1538 YP_1539 YP1539 fTR11 fTR11 1687429 1688286 - putative membrane protein similar to Yersinia pestis CO92 YPO1854 and Yersinia pestis KIM y2452. Contains Haem peroxidase (Interpro|IPR002016%2C (GO:0006804)). Contains Iron permease FTR1 (Interpro|IPR004923) gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1539 YP_1540 YP1540 putP2 putP2 1688610 1690094 - proline permease similar to Yersinia pestis CO92 putP and Yersinia pestis KIM putP. Contains Polycystic kidney disease type 1 protein (Interpro|IPR000434). Contains Glutelin (Interpro|IPR000480%2C (GO:0045735)). Contains Na+/solute symporter (Interpro|IPR001734%2C (GO:0016020)) gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1540 YP_1541 YP1541 YP_1541 1690124 1690321 - putative membrane protein similar to Yersinia pestis CO92 YPO1852 and Yersinia pestis KIM y2454 gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1541 YP_1542 YP1542 putA2 putA2 1690681 1694637 + trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase similar to Yersinia pestis CO92 putA and Yersinia pestis KIM putA. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)). Contains Proline dehydrogenase (Interpro|IPR002872%2C (GO:0006562)). Contains delta-1-pyrroline-5-carboxylate dehydrogenase 3 (Interpro|IPR005933%2C (GO:0006561)) gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1542 YP_1543 YP1543 YP_1543 1695101 1695436 + hypothetical protein similar to Yersinia pestis CO92 YPO1850 and Yersinia pestis KIM y2456 gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1543 YP_1544 YP1544 arsR2 arsR2 1695412 1695807 + putative transcriptional regulators similar to Yersinia pestis CO92 YPO1849 and Yersinia pestis KIM y2457. gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1544 YP_1545 YP1545 glnQ2 glnQ2 1696099 1696860 - putative amino-acid ABC transporter (ATP-binding protein) similar to Yersinia pestis CO92 YPO1848 and Yersinia pestis KIM y2458. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1545 YP_1546 YP1546 artM4 artM4 1696863 1697525 - putative amino-acid ABC transporter (permease) similar to Yersinia pestis CO92 YPO1847 and Yersinia pestis KIM y2459. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1546 YP_1547 YP1547 fliY fliY 1697525 1698325 - putative cystine-binding periplasmic protein similar to Yersinia pestis CO92 fliY and Yersinia pestis KIM fliY. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Ionotropic glutamate receptor (Interpro|IPR001320%2C (GO:0016020)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)) gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1547 YP_1548 YP1548 Acd Acd 1698449 1699441 - putative deaminase similar to Yersinia pestis CO92 YPO1845 and Yersinia pestis KIM y2462. Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)). Contains Pyridoxal phosphate-dependent deaminase (Interpro|IPR005966) gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1548 YP_1549 YP1549 fliZ fliZ 1699730 1700239 - putative alternative sigma factor regulatory protein similar to Yersinia pestis CO92 fliZ and Yersinia pestis KIM fliZ. Contains Phage integrase%2C N-terminal SAM-like (Interpro|IPR004107%2C (GO:0015074)) gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1549 YP_1550 YP1550 fliA1 fliA1 1700461 1701183 - RNA polymerase sigma factor for flagellar operon similar to Yersinia pestis CO92 fliA and Yersinia pestis KIM fliA. Contains Sigma-70 factor family (Interpro|IPR000943%2C (GO:0016987)). Contains Sigma-70 factor family (Interpro|IPR000943%2C (GO:0016987)) gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1550 YP_1551 YP1551 fliC fliC 1701530 1702639 - thermoregulated motility protein similar to Yersinia pestis CO92 fliC and Yersinia pestis KIM y2465. Contains Flagellin%2C C-terminal (Interpro|IPR001029%2C (GO:0001539)%2C (GO:0009288)). Contains Flagellin%2C N-terminal (Interpro|IPR001492%2C (GO:0001539)%2C (GO:0009420)) gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1551 YP_1552 YP1552 fliD1 fliD1 1702936 1704336 + flagellar hook-associated protein 2 similar to Yersinia pestis CO92 fliD and Yersinia pestis KIM fliD. Contains Flagellar hook-associated protein 2 (Interpro|IPR003481%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)). Contains Flagellar hook-associated protein 2 (Interpro|IPR003481%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)) gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1552 YP_1553 YP1553 fliS1 fliS1 1704347 1704745 + flagellar protein FliS similar to Yersinia pestis CO92 fliS and Yersinia pestis KIM fliS. Contains Flagellar protein FliS (Interpro|IPR003713%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)). Contains Flagellar protein FliS (Interpro|IPR003713%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)) gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1553 YP_1554 YP1554 fliT fliT 1704705 1705118 + repressor of class 3a and 3b operons (RflA activity) similar to Yersinia pestis KIM fliT gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1554 YP_1556 YP1556 araC3 araC3 1705437 1706315 + putative AraC-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1837 and Yersinia pestis KIM y2469. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1556 YP_1557 YP1557 YP_1557 1706669 1709624 + similar to gi|15601649|ref|NP_233280.1| chemotactic transducer-related protein [Vibrio cholerae]. There is a frameshift after codon 631. The sequence has been checked and is believed to be correct. Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)) pseudogene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1557 YP_1558 YP1558 alkA alkA 1709785 1710396 + putative glycosidase similar to Yersinia pestis CO92 YPO1834 and Yersinia pestis KIM y2473. Contains HhH-GPD (Interpro|IPR003265%2C (GO:0006284)) gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1558 YP_1559 YP1559 Doc Doc 1710582 1711058 - Prophage maintenance system killer protein similar to Yersinia pestis CO92 YPO1833 and Yersinia pestis KIM y2474. Contains Death-on-curing family protein (Interpro|IPR006440) gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1559 YP_1560 YP1560 YP_1560 1711069 1711374 - hypothetical protein similar to Yersinia pestis CO92 YPO1832 gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1560 YP_1561 YP1561 fliE1 fliE1 1711668 1712039 - flagellar hook-basal body complex protein FliE similar to Yersinia pestis CO92 fliE and Yersinia pestis KIM fliE. Contains Flagellar hook-basal body complex protein FliE (Interpro|IPR001624%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar hook-basal body complex protein FliE (Interpro|IPR001624%2C (GO:0003774)%2C (GO:0009288)) gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1561 YP_1562 YP1562 fliF2 fliF2 1712332 1714044 + flagellar M-ring protein similar to Yersinia pestis CO92 fliF and Yersinia pestis KIM fliF. Contains Flagellar FliF M-ring protein (Interpro|IPR000067%2C (GO:0001539)%2C (GO:0009431)). Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains Type III secretion system outer membrane K protein (Interpro|IPR003282%2C (GO:0009306)%2C (GO:0015448)). Contains Secretory protein YscJ/FliF (Interpro|IPR006182). Contains Flagellar FliF M-ring protein (Interpro|IPR000067%2C (GO:0001539)%2C (GO:0009431)). Contains Type III secretion system outer membrane K protein (Interpro|IPR003282%2C (GO:0009306)%2C (GO:0015448)). Contains Secretory protein YscJ/FliF (Interpro|IPR006182) gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1562 YP_1563 YP1563 fliG1 fliG1 1714041 1715033 + flagellar motor switch protein FliG similar to Yersinia pestis CO92 fliG and Yersinia pestis KIM fliG. Contains Flagellar motor switch protein FliG (Interpro|IPR000090%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009288)) gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1563 YP_1564 YP1564 fliH1 fliH1 1715005 1715742 + flagellar assembly protein FliH similar to Yersinia pestis CO92 fliH and Yersinia pestis KIM fliH. Contains Flagellar assembly protein FliH (Interpro|IPR000563%2C (GO:0001539)%2C (GO:0009288)). Contains Flagellar assembly protein FliH (Interpro|IPR000563%2C (GO:0001539)%2C (GO:0009288)) gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1564 YP_1565 YP1565 fliI2 fliI2 1715681 1717159 + flagellum-specific ATP synthase similar to Yersinia pestis KIM fliI. Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C N-terminal (Interpro|IPR004100%2C (GO:0016469)). Contains ATPase FliI/YscN (Interpro|IPR005714%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0015031)%2C (GO:0016887)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATPase FliI/YscN (Interpro|IPR005714%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:001503 gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1565 YP_1566 YP1566 fliJ fliJ 1717259 1717705 + flagellar protein FliJ similar to Yersinia pestis CO92 fliJ and Yersinia pestis KIM fliJ. Contains Flagellar FliJ protein (Interpro|IPR000809%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009288)) gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1566 YP_1567 YP1567 fliK1 fliK1 1717702 1719054 + flagellar hook-length control protein FliK similar to Yersinia pestis CO92 fliK and Yersinia pestis KIM fliK. Contains Flagellar hook-length control protein (Interpro|IPR001635%2C (GO:0009424)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1567 YP_1568 YP1568 fliL fliL 1719321 1719791 + flagellar protein FliL similar to Yersinia pestis CO92 fliL. Contains Flagellar basal body-associated protein FliL (Interpro|IPR005503%2C (GO:0009425)) gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1568 YP_1569 YP1569 fliM1 fliM1 1719797 1720798 + flagellar motor switch protein FliM similar to Yersinia pestis CO92 fliM and Yersinia pestis KIM fliM. Contains Flagellar motor switch protein FliM (Interpro|IPR001689%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009425)) gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1569 YP_1570 YP1570 fliN fliN 1720795 1721211 + flagellar motor switch protein FliN similar to Yersinia pestis CO92 fliN and Yersinia pestis KIM fliN. Contains Flagellar motor switch FliN protein (Interpro|IPR001172%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009425)). Contains Surface presentation of antigens (SPOA) protein (Interpro|IPR001543) gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1570 YP_1571 YP1571 fliO fliO 1721211 1721747 + flagellar biosynthesis protein similar to Yersinia pestis KIM fliO. gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1571 YP_1572 YP1572 fliP2 fliP2 1721744 1722568 + flagellar biosynthesis protein similar to Yersinia pestis KIM fliP. Contains Flagellar transport protein FliP (Interpro|IPR005837%2C (GO:0016020)). Contains Type III secretion system inner membrane P protein (Interpro|IPR005838%2C (GO:0016020)). Contains Flagellar transport protein FliP (Interpro|IPR005837%2C (GO:0016020)). Contains Type III secretion system inner membrane P protein (Interpro|IPR005838%2C (GO:0016020)) gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1572 YP_1573 YP1573 fliQ2 fliQ2 1722674 1722943 + flagellar biosynthetic protein FliQ similar to Yersinia pestis CO92 fliQ and Yersinia pestis KIM fliQ. Contains Bacterial export protein FliQ%2C family 3 (Interpro|IPR002191%2C (GO:0016020)). Contains Flagellar biosynthesis protein FliQ (Interpro|IPR006305) gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1573 YP_1574 YP1574 fliR2 fliR2 1722946 1723728 + flagellar biosynthetic protein FliR similar to Yersinia pestis CO92 fliR and Yersinia pestis KIM fliR. Contains Bacterial export protein%2C family 1 (Interpro|IPR002010%2C (GO:0016020)). Contains Flagellar biosynthesis protein FliR (Interpro|IPR006303). Contains Bacterial export protein%2C family 1 (Interpro|IPR002010%2C (GO:0016020)). Contains Flagellar biosynthesis protein FliR (Interpro|IPR006303) gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1574 YP_1575 YP1575 YP_1575 1723749 1724117 + hypothetical protein similar to Yersinia pestis CO92 YPO1818 and Yersinia pestis KIM y2489. gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1575 YP_1576 YP1576 YP_1576 1724162 1724581 + hypothetical protein similar to Yersinia pestis CO92 YPO1817 and Yersinia pestis KIM y2490 gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1576 YP_1577 YP1577 rbsK3 rbsK3 1724839 1725798 - putative sugar kinase similar to Yersinia pestis CO92 YPO1816. Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173) gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1577 YP_1578 YP1578 araH7 araH7 1725847 1726869 - putative permease of ABC transporter similar to Yersinia pestis KIM y2492. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1578 YP_1579 YP1579 mglA5 mglA5 1726872 1728515 - ATP binding protein of ABC transporter for ribose similar to Yersinia pestis KIM y2493. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1579 YP_1580 YP1580 rbsB6 rbsB6 1728515 1729510 - putative sugar-binding periplasmic protein similar to Yersinia pestis CO92 YPO1813 and Yersinia pestis KIM y2494. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1580 YP_1581 YP1581 araH8 araH8 1729553 1730629 - putative sugar transport system permease protein similar to Yersinia pestis CO92 YPO1812 and Yersinia pestis KIM y2495. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1581 YP_1582 YP1582 YP_1582 1730741 1732813 - putative oxidoreductase similar to Yersinia pestis CO92 YPO1811 and Yersinia pestis KIM y2497. Contains DNA gyrase%2C subunit B (Interpro|IPR000565%2C (GO:0006265)). Contains Basic helix-loop-helix dimerization domain bHLH (Interpro|IPR001092). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1582 YP_1583 YP1583 deoR6 deoR6 1733025 1734026 + putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1810 and Yersinia pestis KIM y2498. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)) gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1583 YP_1584 YP1584 flgL flgL 1734055 1735068 - flagellar hook-associated protein 3 similar to Yersinia pestis CO92 flgL and Yersinia pestis KIM flgL. Contains Flagellin%2C N-terminal (Interpro|IPR001492%2C (GO:0001539)%2C (GO:0009420)) gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1584 YP_1585 YP1585 flgK1 flgK1 1735174 1736838 - flagellar hook-associated protein 1 similar to Yersinia pestis CO92 flgK and Yersinia pestis KIM flgK. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar hook-associated protein (Interpro|IPR002371%2C (GO:0009424)). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar hook-associated protein (Interpro|IPR002371%2C (GO:0009424)) gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1585 YP_1586 YP1586 flgJ1 flgJ1 1737423 1738367 - flagellar protein FlgJ similar to Yersinia pestis CO92 flgJ and Yersinia pestis KIM flgJ. Contains Flagellar protein FlgJ (Interpro|IPR000423%2C (GO:0001539)%2C (GO:0009288)). Contains Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (Interpro|IPR002901%2C (GO:0009253)) gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1586 YP_1587 YP1587 flgI1 flgI1 1738367 1739476 - flagellar P-ring protein precursor similar to Yersinia pestis CO92 flgI and Yersinia pestis KIM flgI. Contains Flagellar P-ring protein (Interpro|IPR001782%2C (GO:0001539)%2C (GO:0030288)). Contains Flagellar P-ring protein (Interpro|IPR001782%2C (GO:0001539)%2C (GO:0030288)) gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1587 YP_1588 YP1588 flgH1 flgH1 1739491 1740222 - basal-body outer-membrane L (lipopolysaccharide layer) ring protein similar to Yersinia pestis KIM flgH. Contains Flagellar L-ring protein (Interpro|IPR000527%2C (GO:0001539)%2C (GO:0009427)). Contains Flagellar L-ring protein (Interpro|IPR000527%2C (GO:0001539)%2C (GO:0009427)) gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1588 YP_1589 YP1589 flgG1 flgG1 1740324 1741022 - flagellar basal-body rod protein FlgG similar to Yersinia pestis CO92 flgG and Yersinia pestis KIM flgG. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)) gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1589 YP_1590 YP1590 flgF1 flgF1 1741003 1741632 - flagellar basal-body rod protein FlgF similar to Yersinia pestis CO92 flgF and Yersinia pestis KIM flgF. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)) gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1590 YP_1591 YP1591 flgE1 flgE1 1741654 1742940 - flagellar hook protein FlgE similar to Yersinia pestis CO92 flgE and Yersinia pestis KIM flgE. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)) gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1591 YP_1592 YP1592 flgD1 flgD1 1743142 1743819 - basal-body rod modification protein FlgD similar to Yersinia pestis CO92 flgD and Yersinia pestis KIM flgD. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)). Contains Flagellar hook capping protein (Interpro|IPR005648). Contains Flagellar hook capping protein (Interpro|IPR005648) gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1592 YP_1593 YP1593 flgC1 flgC1 1743834 1744238 - flagellar basal-body rod protein FlgC similar to Yersinia pestis CO92 flgC and Yersinia pestis KIM flgC. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgC (Interpro|IPR006299). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgC (Interpro|IPR006299) gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1593 YP_1594 YP1594 flgB1 flgB1 1744244 1744657 - flagellar basal-body rod protein FlgB similar to Yersinia pestis CO92 flgB and Yersinia pestis KIM flgB. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgB (Interpro|IPR006300). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgB (Interpro|IPR006300) gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1594 YP_1595 YP1595 flgA flgA 1744830 1745594 + flagella basal body P-ring formation protein FlgA similar to Yersinia pestis CO92 flgA and Yersinia pestis KIM flgA. Contains Flageller protein FlgA (Interpro|IPR004924%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0030288)) gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1595 YP_1596 YP1596 flgM flgM 1745745 1746047 + negative regulator of flagellin synthesis similar to Yersinia pestis CO92 flgM and Yersinia pestis KIM flgM gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1596 YP_1597 YP1597 flgN1 flgN1 1746063 1746506 + flagella synthesis protein FlgN similar to Yersinia pestis CO92 flgN and Yersinia pestis KIM flgN. gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1597 YP_1598 YP1598 inv inv 1746696 1750364 - similar to Yersinia pestis CO92 invasin A (pseudogene)%3B disrupted by IS1541 element pseudogene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1598 YP_1599 YP1599 tnp_19 tnp_19 1748858 1749316 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1599 YP_1600 YP1600 flhE flhE 1750974 1751396 - flagellar protein FlhE precursor similar to Yersinia pestis CO92 flhE and Yersinia pestis KIM flhE gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1600 YP_1601 YP1601 flhA2 flhA2 1751396 1753474 - flagellar biosynthesis protein FlhA similar to Yersinia pestis CO92 flhA and Yersinia pestis KIM flhA. Contains Bacterial type III secretion FHIPEP (Interpro|IPR001712%2C (GO:0016020)). Contains NADH-plastoquinone oxidoreductase%2C chain 5 (Interpro|IPR003945%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains Flagellar biosynthesis protein FlhA (Interpro|IPR006301) gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1601 YP_1602 YP1602 flhB2 flhB2 1753474 1754634 - flagellar biosynthetic protein FlhB similar to Yersinia pestis CO92 flhB and Yersinia pestis KIM flhB. Contains Type III secretion exporter (Interpro|IPR006135%2C (GO:0016020)). Contains Flagellar biosynthetic protein FlhB (Interpro|IPR006136%2C (GO:0016020)). Contains Type III secretion exporter (Interpro|IPR006135%2C (GO:0016020)). Contains Flagellar biosynthetic protein FlhB (Interpro|IPR006136%2C (GO:0016020)) gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1602 YP_1603 YP1603 YP_1603 1755166 1755624 + putative membrane protein similar to Yersinia pestis CO92 YPO1789 and Yersinia pestis KIM y2520 gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1603 YP_1604 YP1604 acpP2 acpP2 1755618 1755944 + putative acyl carrier protein similar to Yersinia pestis CO92 YPO1788 gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1604 YP_1606 YP1606 YP_1606 1756467 1756808 - putative exported protein similar to Yersinia pestis CO92 YPO1786 and Yersinia pestis KIM y2521. gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1606 YP_1607 YP1607 pcoD pcoD 1756905 1757789 - putative copper resistance protein D similar to Yersinia pestis CO92 YPO1785 and Yersinia pestis KIM y2522 gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1607 YP_1608 YP1608 copC copC 1757792 1758337 - Uncharacterized protein%2C like Cu resistance protein CopC similar to Yersinia pestis KIM y2523. gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1608 YP_1609 YP1609 YP_1609 1758392 1758577 + hypothetical protein no significant database match found gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1609 YP_1610 YP1610 ftnA ftnA 1758610 1759230 - ferritin similar to Yersinia pestis CO92 ftnA and Yersinia pestis KIM ftn. Contains Ferritin (Interpro|IPR001519%2C (GO:0008199)) gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1610 YP_1611 YP1611 holE holE 1759520 1759750 + DNA polymerase III%2C theta subunit similar to Yersinia pestis CO92 holE gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1611 YP_1612 YP1612 pip pip 1759810 1760760 - proline iminopeptidase similar to Yersinia pestis CO92 pip and Yersinia pestis KIM y2526. Contains Alpha/beta hydrolase fold (Interpro|IPR000073). Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Prolyl aminopeptidase S33 (Interpro|IPR002410%2C (GO:0006508)). Contains Alpha/beta hydrolase (Interpro|IPR003089%2C (GO:0006725)%2C (GO:0016787)). Contains Proline iminopeptidase 1 (Interpro|IPR005944%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0016804)) gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1612 YP_1613 YP1613 ptrB ptrB 1761482 1763533 - oligopeptidase B similar to Yersinia pestis CO92 ptrB. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Myb DNA-binding domain (Interpro|IPR001005%2C (GO:0005634)). Contains Prolyl oligopeptidase (Interpro|IPR001375%2C (GO:0006508)%2C (GO:0008236)). Contains Prolyl oligopeptidase serine protease (S9A) (Interpro|IPR002470%2C (GO:0006508)). Contains Prolyl oligopeptidase%2C N-terminal beta-propeller domain (Interpro|IPR004106%2C (GO:0006508)) gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1613 YP_1614 YP1614 YP_1614 1763843 1764268 - putative exported protein similar to Yersinia pestis CO92 YPO1779 and Yersinia pestis KIM y2528 gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1614 YP_1615 YP1615 YP_1615 1764360 1764686 - hypothetical protein similar to Yersinia pestis CO92 YPO1778 and Yersinia pestis KIM y2529. gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1615 YP_1616 YP1616 YP_1616 1764708 1765028 - hypothetical protein similar to Yersinia pestis CO92 YPO1777 and Yersinia pestis KIM y2530 gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1616 YP_1617 YP1617 dbpA dbpA 1765122 1766504 - ATP-dependent RNA helicase similar to Yersinia pestis CO92 dbpA and Yersinia pestis KIM dbpA. Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)). Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains DbpA RNA binding domain (Interpro|IPR005580) gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1617 YP_1618 YP1618 purT purT 1766817 1767998 + phosphoribosylglycinamide formyltransferase similar to Yersinia pestis CO92 purT and Yersinia pestis KIM purT. Contains NAD binding site (Interpro|IPR000205). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains ATP-dependent carboxylate-amine ligase-like%2C ATP-grasp (Interpro|IPR003135). Contains Phosphoribosylglycinamide formyltransferase 2 (Interpro|IPR005862%2C (GO:0009113)%2C (GO:0016742)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1618 YP_1619 YP1619 YP_1619 1768124 1768381 - hypothetical protein similar to Yersinia pestis CO92 YPO1774 and Yersinia pestis KIM y2534. Contains Protein of unknown function UPF0181 (Interpro|IPR005371%2C (GO:0005554)) gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1619 YP_1620 YP1620 pabB pabB 1768546 1769922 + para-aminobenzoate synthase component I similar to Yersinia pestis CO92 YPO1773 and Yersinia pestis KIM pabB. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230). Contains Anthranilate synthase component I and chorismate binding protein (Interpro|IPR005801%2C (GO:0009058)). Contains Para-aminobenzoate synthase%2C component I (Interpro|IPR005802%2C (GO:0009396)). Contains Anthranilate synthase component I%2C N-terminal (Interpro|IPR006805) gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1620 YP_1621 YP1621 mutT2 mutT2 1769919 1770518 + MutT-family protein similar to Yersinia pestis CO92 YPO1772 and Yersinia pestis KIM y2536. Contains Protein of unknown function UPF0035 (Interpro|IPR000059%2C (GO:0005554)). Contains NUDIX hydrolase (Interpro|IPR000086) gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1621 YP_1622 YP1622 sdaA sdaA 1771206 1772570 + L-serine dehydratase similar to Yersinia pestis CO92 YPO1771 and Yersinia pestis KIM sdaA. Contains Iron-sulfur-dependent L-serine dehydratase single chain form (Interpro|IPR004644%2C (GO:0006094)). Contains Serine dehydratase alpha chain (Interpro|IPR005130). Contains Serine dehydratase beta chain (Interpro|IPR005131) gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1622 YP_1623 YP1623 hpaC hpaC 1772850 1773347 - 4-hydroxyphenylacetate 3-monooxygenase coupling protein similar to Yersinia pestis CO92 hpaC and Yersinia pestis KIM y2538. Contains Flavin reductase-like (Interpro|IPR002563%2C (GO:0008246)%2C (GO:0016491)) gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1623 YP_1624 YP1624 hpaB hpaB 1773368 1774930 - 4-hydroxyphenylacetate 3-monooxygenase similar to Yersinia pestis CO92 hpaB and Yersinia pestis KIM hpaB. Contains 4-hydroxyphenylacetate 3-hydroxylase (Interpro|IPR004925%2C (GO:0016491)) gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1624 YP_1625 YP1625 hpaX hpaX 1774998 1776365 - putative 4-hydroxyphenylacetate permease similar to Yersinia pestis CO92 hpaX and Yersinia pestis KIM hpaX. Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1625 YP_1626 YP1626 hpaI hpaI 1776391 1777197 - 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase similar to Yersinia pestis CO92 hpaI and Yersinia pestis KIM y2541. Contains HpcH/HpaI aldolase (Interpro|IPR005000%2C (GO:0016228)) gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1626 YP_1627 YP1627 hpaH hpaH 1777208 1778011 - 2-oxo-hept-3-ene-1%2C7-dioate hydratase similar to Yersinia pestis CO92 hpaH and Yersinia pestis KIM hpaH. Contains Hydratase/decarboxylase (Interpro|IPR002607%2C (GO:0006725)%2C (GO:0016829)) gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1627 YP_1628 YP1628 hpaF hpaF 1778005 1778403 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase similar to Yersinia pestis CO92 hpaF and Yersinia pestis KIM hpaF. Contains 5-carboxymethyl-2-hydroxymuconate isomerase (Interpro|IPR004220%2C (GO:0006725)%2C (GO:0008704)) gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1628 YP_1629 YP1629 hpaD hpaD 1778428 1779285 - 3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase similar to Yersinia pestis CO92 hpaD and Yersinia pestis KIM hpaD. Contains Catalytic LigB subunit of aromatic ring-opening dioxygenase (Interpro|IPR004183%2C (GO:0006725)%2C (GO:0016491)) gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1629 YP_1630 YP1630 hpaE hpaE 1779404 1780801 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase similar to Yersinia pestis CO92 hpaE and Yersinia pestis KIM hpaE. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1630 YP_1631 YP1631 YP_1631 1780798 1782272 - similar to Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG SW:HPAG_ECOLI (Q46978) (429 aa)%2C and to Escherichia coli homoprotocatechuate catabolism bifunctional isomerase/decarboxylase SW:HPCE_ECOLI (P37352) (405 aa). There is a frameshift after codon 204. The sequence has been checked and is believed to be correct. Contains Fumarylacetoacetate (FAA) hydrolase (Interpro|IPR002529%2C (GO:0008152)). Contains Fumarylacetoacetate (FAA) hydrolase (Interpro|IPR002529%2C (GO:0008152)) pseudogene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1631 YP_1632 YP1632 hpcR hpcR 1782558 1783034 + homoprotocatechuate degradative operon repressor similar to Yersinia pestis CO92 hpcR and Yersinia pestis KIM hpaR. Contains Bacterial regulatory protein%2C MarR family (Interpro|IPR000835%2C (GO:0006355)) gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1632 YP_1633 YP1633 terC2 terC2 1783136 1784704 - putative membrane protein similar to Yersinia pestis CO92 YPO1759 and Yersinia pestis KIM y2549. Contains CBS domain (Interpro|IPR000644). Contains Transporter associated domain (Interpro|IPR005170). Contains Integral membrane protein TerC family (Interpro|IPR005496) gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1633 YP_1634 YP1634 manX1 manX1 1785457 1786365 + PTS system%2C mannose-specific IIAB component similar to Yersinia pestis CO92 manX and Yersinia pestis KIM manX. Contains PTS system fructose subfamily IIA component (Interpro|IPR004701%2C (GO:0016021)). Contains PTS system sorbose subfamily IIB component (Interpro|IPR004720%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009401)). Contains PTS system sorbose subfamily IIB component (Interpro|IPR004720%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009401)) gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1634 YP_1635 YP1635 manY manY 1786415 1787254 + PTS system%2C mannose-specific IIC component similar to Yersinia pestis CO92 manY and Yersinia pestis KIM manY. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Phosphotransferase system PTS%2C sorbose-specific IIC subunit (Interpro|IPR004700%2C (GO:0016021)) gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1635 YP_1636 YP1636 manZ manZ 1787261 1788148 + PTS system%2C mannose-specific IID component similar to Yersinia pestis CO92 manZ and Yersinia pestis KIM manZ. Contains PTS system mannose/fructose/sorbose family IID component (Interpro|IPR004704%2C (GO:0016021)) gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1636 YP_1637 YP1637 YP_1637 1788348 1788809 + putative membrane protein similar to Yersinia pestis CO92 YPO1755 and Yersinia pestis KIM y2554. Contains Acriflavin resistance protein (Interpro|IPR001036) gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1637 YP_1638 YP1638 YP_1638 1789238 1789807 + putative membrane protein similar to Yersinia pestis CO92 YPO1754 and Yersinia pestis KIM y2555. Contains Protein of unknown function DUF204 (Interpro|IPR003810) gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1638 YP_1639 YP1639 fcuA fcuA 1789968 1792202 + similar to part of Yersinia pestis CO92 YPO1753 and Yersinia pestis KIM fcuA%3B disrupted by IS100 and rearrangement%3B 5' end found in YP1639a pseudogene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1639 YP_1639a YP1639a fcuA fcuA 1651724 1651825 + similar to part of Yersinia pestis CO92 YPO1753 and Yersinia pestis KIM fcuA%3B disrupted by IS100 and rearrangement%3B 3' end found in YP1639 pseudogene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1639a YP_1641 YP1641 YP_1641 1792289 1793311 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1641 YP_1642 YP1642 dnaC_13 dnaC_13 1793308 1794090 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1642 YP_1643 YP1643 dksA2 dksA2 1794490 1794699 - DnaK suppressor protein similar to Yersinia pestis KIM y2408. Contains Zn-finger%2C prokaryotic DksA/TraR C4 type (Interpro|IPR000962) gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1643 YP_1644 YP1644 YP_1644 1794689 1795270 - hypothetical protein similar to Yersinia pestis CO92 YPO1902 and Yersinia pestis KIM y2407 gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1644 YP_1645 YP1645 YP_1645 1795276 1795440 - hypothetical protein similar to Yersinia pestis CO92 YPO1903 gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1645 YP_1646 YP1646 alpA2 alpA2 1795459 1795740 - putative transcriptional regulator similar to Yersinia pestis CO92 YPO1904 gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1646 YP_1647 YP1647 YP_1647 1795784 1796338 - hypothetical protein similar to Yersinia pestis CO92 YPO1905 and Yersinia pestis KIM y2406. gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1647 YP_1648 YP1648 YP_1648 1796346 1796768 - hypothetical protein similar to Yersinia pestis CO92 YPO1905a and Yersinia pestis KIM y2405. gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1648 YP_1649 YP1649 fyuA fyuA 1797584 1799605 - pesticin/yersiniabactin receptor protein similar to Yersinia pestis CO92 fyuA and Yersinia pestis KIM psn. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1649 YP_1650 YP1650 ybtE ybtE 1799736 1801313 - yersiniabactin siderophore biosynthetic protein similar to Yersinia pestis CO92 ybtE and Yersinia pestis KIM ybtE. Contains Signal peptidase (Interpro|IPR000508%2C (GO:0006508)%2C (GO:0016020)). Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)) gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1650 YP_1651 YP1651 ybtT ybtT 1801317 1802120 - yersiniabactin biosynthetic protein YbtT similar to Yersinia pestis CO92 ybtT and Yersinia pestis KIM ybtT. Contains Thioesterase (Interpro|IPR001031%2C (GO:0009058)%2C (GO:0016788)). Contains Haem peroxidase (Interpro|IPR002016%2C (GO:0006804)) gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1651 YP_1652 YP1652 ybtU ybtU 1802117 1803277 - yersiniabactin biosynthetic protein YbtU similar to Yersinia pestis CO92 ybtU and Yersinia pestis KIM ybtU. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)) gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1652 YP_1653 YP1653 irp1 irp1 1803214 1812705 - yersiniabactin biosynthetic protein similar to Yersinia pestis CO92 irp1 and Yersinia pestis KIM irp1. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains Thioesterase (Interpro|IPR001031%2C (GO:0009058)%2C (GO:0016788)). Contains Acyl transferase domain (Interpro|IPR001227%2C (GO:0008152)%2C (GO:0016740)). Contains Condensation domain (Interpro|IPR001242%2C (GO:0005554)). Contains C-5 cytosine-specific DNA methylase (Interpro|IPR001525%2C (GO:0006306)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)). Contains Phosphopantetheine attachment site (Interpro|IPR006162). Contains Phosphopantetheine-binding domain (Interpro|IPR006163) gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1653 YP_1654 YP1654 irp2 irp2 1812793 1818918 - yersiniabactin biosynthetic protein similar to Yersinia pestis CO92 irp2 and Yersinia pestis KIM irp2. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)). Contains Condensation domain (Interpro|IPR001242%2C (GO:0005554)). Contains Adipokinetic hormone (Interpro|IPR002047%2C (GO:0005576)). Contains Phosphopantetheine attachment site (Interpro|IPR006162). Contains Phosphopantetheine-binding domain (Interpro|IPR006163) gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1654 YP_1655 YP1655 ybtA ybtA 1819091 1820050 - transcriptional regulator YbtA similar to Yersinia pestis CO92 ybtA and Yersinia pestis KIM ybtA. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1655 YP_1656 YP1656 ybtP ybtP 1820217 1822019 + permease and ATP-binding protein of yersiniabactin-iron ABC transporter similar to Yersinia pestis KIM ybtP. Contains Uridine kinase (Interpro|IPR000764%2C (GO:0006224)). Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1656 YP_1657 YP1657 ybtQ ybtQ 1822006 1823808 + inner membrane ABC-transporter YbtQ similar to Yersinia pestis CO92 ybtQ and Yersinia pestis KIM ybtQ. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1657 YP_1658 YP1658 ybtX ybtX 1823678 1825081 + putative signal transducer similar to Yersinia pestis CO92 ybtX and Yersinia pestis KIM ybtX. gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1658 YP_1659 YP1659 ybtS ybtS 1825109 1826413 + putative salicylate synthetase similar to Yersinia pestis CO92 ybtS and Yersinia pestis KIM ybtS. Contains Anthranilate synthase component I and chorismate binding protein (Interpro|IPR005801%2C (GO:0009058)) gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1659 YP_1660 YP1660 int2 int2 1826607 1827869 - integrase similar to Yersinia pestis CO92 int and Yersinia pestis KIM y2393. Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)). Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)) gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1660 YP_1661 YP1661 fimC2 fimC2 1828409 1829149 - putative pili assembly chaperone similar to Yersinia pestis CO92 YPO1918 and Yersinia pestis KIM y2392. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1661 YP_1662 YP1662 YP_1662 1829146 1830495 - putative exported protein similar to Yersinia pestis CO92 YPO1919 and Yersinia pestis KIM y2391 gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1662 YP_1663 YP1663 fimD2 fimD2 1830511 1833102 - putative fimbrial usher protein similar to Yersinia pestis CO92 YPO1920 and Yersinia pestis KIM y2390. Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C (GO:0016020)) gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1663 YP_1664 YP1664 fimC3 fimC3 1833151 1833795 - putative pili assembly chaperone similar to Yersinia pestis CO92 YPO1921 and Yersinia pestis KIM y2389. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1664 YP_1665 YP1665 fimA1 fimA1 1833888 1834418 - fimbrial protein similar to Yersinia pestis CO92 YPO1922. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1665 YP_1666 YP1666 baeS3 baeS3 1834931 1838800 - putative Histidine protein kinase sensor similar to Yersinia pestis KIM y2387. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1666 YP_1667 YP1667 fimZ fimZ 1838775 1839407 - putative two-component response regulator similar to Yersinia pestis CO92 YPO1925 and Yersinia pestis KIM fimZ. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1667 YP_1668 YP1668 aCH1 aCH1 1840233 1841555 - putative 4-hydroxybutyrate coenzyme A transferase similar to Yersinia pestis CO92 YPO1926 and Yersinia pestis KIM y2385. Contains Acetyl-CoA hydrolase/transferase (Interpro|IPR003702%2C (GO:0006084)) gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1668 YP_1669 YP1669 maoC maoC 1841578 1842228 - putative transcriptional regulator similar to Yersinia pestis KIM y2384. Contains MaoC-like dehydratase (Interpro|IPR002539%2C (GO:0008152)%2C (GO:0016491)) gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1669 YP_1670 YP1670 citE2 citE2 1842170 1843012 - putative citrate lyase beta chain similar to Yersinia pestis CO92 YPO1928 and Yersinia pestis KIM y2383 gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1670 YP_1671 YP1671 lysR8 lysR8 1843089 1843985 + putative LysR-family transcriptional regulator similar to Yersinia pestis CO92 YPO1929 and Yersinia pestis KIM y2382. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1671 YP_1672 YP1672 YP_1672 1844060 1844533 - putative lipoprotein similar to Yersinia pestis CO92 YPO1930 and Yersinia pestis KIM y2381 gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1672 YP_1673 YP1673 YP_1673 1844558 1845118 - hypothetical protein similar to Yersinia pestis CO92 YPO1931 and Yersinia pestis KIM y2380 gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1673 YP_1674 YP1674 proP16 proP16 1845338 1846615 - putative sugar transporter similar to Yersinia pestis CO92 YPO1932 and Yersinia pestis KIM y2379. Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1674 YP_1675 YP1675 YP_1675 1846633 1847502 - putative dicarboxylic acid hydrolase similar to Yersinia pestis CO92 YPO1933 and Yersinia pestis KIM y2378. Contains Amidohydrolase 2 (Interpro|IPR006992) gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1675 YP_1676 YP1676 lysR9 lysR9 1847614 1848576 + putative LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1934 and Yersinia pestis KIM y2377. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1676 YP_1677 YP1677 nqrE2 nqrE2 1848881 1849504 - putative oxidoreductase similar to Yersinia pestis KIM y2376. Contains RnfA-Nqr electron transport subunit (Interpro|IPR003667%2C (GO:0016020)) gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1677 YP_1678 YP1678 aRO81 aRO81 1849805 1850992 + putative aminotransferase similar to Yersinia pestis CO92 YPO1936 and Yersinia pestis KIM y2375. Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1678 YP_1679 YP1679 ansP2 ansP2 1851188 1852717 - L-asparagine permease similar to Yersinia pestis KIM ansP. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1679 YP_1680 YP1680 glpR4 glpR4 1853439 1854209 - putative deoR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1938 and Yersinia pestis KIM y2373. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1680 YP_1681 YP1681 hfi2 hfi2 1854762 1854968 + Hydroxypyruvate isomerase no significant database match found gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1681 YP_1682 YP1682 glsA1 glsA1 1855405 1856427 + putative glutaminase similar to Yersinia pestis CO92 YPO1939 and Yersinia pestis KIM y2372. Contains Beta-lactamase%2C class A (Interpro|IPR000871). Contains Glutaminase (Interpro|IPR007043) gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1682 YP_1683 YP1683 proP17 proP17 1856538 1858178 + putative membrane protein similar to Yersinia pestis CO92 YPO1940 and Yersinia pestis KIM y2371. Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1683 YP_1685 YP1685 fTR12 fTR12 1858758 1860677 + putative membrane protein similar to Yersinia pestis CO92 YPO1941 and Yersinia pestis KIM y2370. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Iron permease FTR1 (Interpro|IPR004923) gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1685 YP_1686 YP1686 YP_1686 1860881 1861408 + putative exported protein similar to Yersinia pestis CO92 YPO1942 gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1686 YP_1687 YP1687 YP_1687 1861664 1863118 + putative membrane protein similar to Yersinia pestis CO92 YPO1943 and Yersinia pestis KIM y2367. Contains YHS domain (Interpro|IPR007029) gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1687 YP_1688 YP1688 YP_1688 1863121 1864413 + putative membrane protein similar to Yersinia pestis CO92 YPO1944 and Yersinia pestis KIM y2366. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Protein of unknown function DUF214 (Interpro|IPR003838) gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1688 YP_1689 YP1689 YP_1689 1864346 1865566 + putative membrane protein similar to Yersinia pestis CO92 YPO1945 and Yersinia pestis KIM y2365. Contains Protein of unknown function DUF214 (Interpro|IPR003838) gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1689 YP_1690 YP1690 phnL4 phnL4 1865570 1866283 + ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO1946 and Yersinia pestis KIM y2364. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1690 YP_1691 YP1691 trxA1 trxA1 1866240 1866770 + putative thioredoxin-family protein similar to Yersinia pestis KIM y2363. Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1691 YP_1692 YP1692 YP_1692 1866767 1867081 + putative cytochrome precursor similar to Yersinia pestis KIM y2362. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Cytochrome c%2C class IC (Interpro|IPR002329%2C (GO:0006118)). Contains Cytochrome c%2C class I (Interpro|IPR003088%2C (GO:0006118)) gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1692 YP_1693 YP1693 tehB tehB 1867254 1868141 + putative tellurite resistance protein similar to Yersinia pestis CO92 YPO1949 and Yersinia pestis KIM tehB. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Tellurite resistance protein TehB (Interpro|IPR004537) gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1693 YP_1694 YP1694 pepP1 pepP1 1868282 1869499 + putative peptidase similar to Yersinia pestis CO92 YPO1950 and Yersinia pestis KIM hmsH. Contains Metallopeptidase family M24 (Interpro|IPR000994%2C (GO:0006508)%2C (GO:0008235)). Contains Methionine aminopeptidase (Interpro|IPR001714%2C (GO:0006508)) gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1694 YP_1695 YP1695 hmsH hmsH 1870105 1872636 + hemin storage system%2C HmsH protein similar to Yersinia pestis CO92 hmsH and Yersinia pestis KIM y2359. Contains TPR repeat (Interpro|IPR001440) gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1695 YP_1696 YP1696 hmsF hmsF 1872649 1874670 + hemin storage system%2C HmsF protein similar to Yersinia pestis CO92 hmsF and Yersinia pestis KIM y2358. Contains Beta and gamma crystallin (Interpro|IPR001064). Contains Polysaccharide deacetylase (Interpro|IPR002509%2C (GO:0005975)%2C (GO:0016810)) gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1696 YP_1697 YP1697 YP_1697 1874621 1875994 + Glycosyltransferase similar to Yersinia pestis KIM y2357. Contains Glycosyl transferase%2C family 2 (Interpro|IPR001173)%3B probably involved in cell wall biogenesis gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1697 YP_1698 YP1698 hmsS hmsS 1875991 1876458 + hemin storage system%2C HmsS protein similar to Yersinia pestis CO92 hmsS and Yersinia pestis KIM hmsS gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1698 YP_1699 YP1699 rimL rimL 1876792 1877691 + putative acetyltransferase similar to Yersinia pestis CO92 YPO1955 and Yersinia pestis KIM y2355. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1699 YP_1700 YP1700 YP_1700 1878130 1879728 + similar to pir||AG0238 hypothetical protein YPO1956 [imported] - Yersinia pestis (strain CO92)(92 aa)%3B disrupted by IS285 element pseudogene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1700 YP_1701 YP1701 YP_1701 1878214 1879422 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1701 YP_1702 YP1702 phoH2 phoH2 1879791 1880579 + putative phosphate starvation-inducible protein similar to Yersinia pestis CO92 phoH and Yersinia pestis KIM phoH. Contains Myosin head (motor domain) (Interpro|IPR001609%2C (GO:0016459)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains PhoH-like protein (Interpro|IPR003714%2C (GO:0016036)) gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1702 YP_1703 YP1703 chaA chaA 1880682 1881782 - calcium/proton antiporter similar to Yersinia pestis CO92 chaA and Yersinia pestis KIM chaA. Contains Calcium/proton exchanger superfamily (Interpro|IPR004713%2C (GO:0006812)%2C (GO:0016021)). Contains Sodium/calcium exchanger membrane region (Interpro|IPR004837) gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1703 YP_1704 YP1704 narX narX 1882331 1884136 - nitrate/nitrite sensor protein similar to Yersinia pestis CO92 narX and Yersinia pestis KIM narX. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1704 YP_1705 YP1705 aRO82 aRO82 1884395 1885843 + putative GntR-family regulatory protein similar to Yersinia pestis CO92 YPO1960 and Yersinia pestis KIM y2350. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1705 YP_1707 YP1707 cstC cstC 1886384 1887724 + acetylornithine delta-aminotransferase similar to Yersinia pestis KIM cstC. Contains Acetylornithine and succinylornithine aminotransferase (Interpro|IPR004636%2C (GO:0006525)%2C (GO:0008483)). Contains Aminotransferase class-III (Interpro|IPR005814%2C (GO:0008483)) gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1707 YP_1708 YP1708 astA astA 1887754 1888806 + arginine N-succinyltransferase similar to Yersinia pestis CO92 astA and Yersinia pestis KIM y2348. Contains Arginine N-succinyltransferase beta subunit (Interpro|IPR007041) gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1708 YP_1709 YP1709 astD astD 1888803 1890320 + succinylglutamic semialdehyde dehydrogenase similar to Yersinia pestis CO92 astD and Yersinia pestis KIM y2347. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1709 YP_1710 YP1710 astB astB 1890317 1891687 + succinylarginine dihydrolase similar to Yersinia pestis CO92 astB and Yersinia pestis KIM y2346. Contains Succinylarginine dihydrolase (Interpro|IPR007079) gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1710 YP_1711 YP1711 YP_1711 1891745 1892740 + Succinylglutamate desuccinylase similar to Yersinia pestis KIM y2345. Contains Succinylglutamate desuccinylase/aspartoacylase (Interpro|IPR007036) gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1711 YP_1712 YP1712 ompC3 ompC3 1893468 1894550 + Outer membrane protein (porin) Best Blastp hit %3D gi|11277510|pir||T46993 hypothetical protein [imported] - Yersinia pestis%2C gi|4106581|emb|CAA21336.1| (AL031866) ORF13%2C len: 315 aa%2C similar to ompF%2C outer membrane porin%2C from Serratia marcescens SMU81967_1 and E.coli D90776_1%2C(len:315 aa)%3B. Contains Porin%2C Gram-negative type (Interpro|IPR001702%2C (GO:0016020)). Contains Porin%2C E.coli/Salmonella type (Interpro|IPR001897%2C (GO:0016020)). Contains Outer membrane protein P2 (Interpro|IPR003229) gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1712 YP_1713 YP1713 hutG hutG 1894867 1895760 - putative N-formylglutamate amidohydrolase similar to Yersinia pestis CO92 hutG and Yersinia pestis KIM y2341. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1713 YP_1714 YP1714 hutI hutI 1895670 1896890 - imidazolonepropionase similar to Yersinia pestis CO92 hutI. Contains Imidazolonepropionase (Interpro|IPR005920%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0019556)). Contains Amidohydrolase (Interpro|IPR006680) gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1714 YP_1715 YP1715 hutC1 hutC1 1897094 1897435 - similar to C-terminal 113 residues of putative GntR-family transcriptional regulatory protein in Yersina pestis%2C such as gi|16122217|ref|NP_405530.1| (NC_003143) putative GntR-family transcriptional regulatory protein [Yersinia pestis]%2C gi|22126224|ref|NP_669647.1| (NC_004088) putative repressor [Yersinia pestis KIM]%2C gi|11277577|pir||T46987 hypothetical protein hutC [imported] - Yersinia pestis%2C gi|4106575|emb|CAA21330.1| (AL031866) ORF8%3B this CDS has been disrupted by IS100 element and the N-treminal located in the range from basepair 2028843 to 2029268 (complement)%3B The rearrangement has been confirmed. pseudogene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1715 YP_1716 YP1716 dnaC_14 dnaC_14 1897505 1898287 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1716 YP_1717 YP1717 YP_1717 1898284 1899306 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1717 YP_1718 YP1718 YP_1718 1899713 1900102 + hypothetical protein similar to Yersinia pestis CO92 YPO1693 and Yersinia pestis KIM y1855 gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1718 YP_1719 YP1719 YP_1719 1900212 1900451 - hypothetical protein similar to Yersinia pestis CO92 YPO1694 and Yersinia pestis KIM y1856 gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1719 YP_1720 YP1720 YP_1720 1900659 1901648 - putative membrane protein similar to Yersinia pestis CO92 YPO1695 and Yersinia pestis KIM y1857. gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1720 YP_1721 YP1721 fimD3 fimD3 1901854 1904301 - putative outer membrane usher protein similar to Yersinia pestis CO92 YPO1696 and Yersinia pestis KIM y1858. Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C (GO:0016020)) gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1721 YP_1722 YP1722 fimC4 fimC4 1904455 1905207 - putative chaperone protein similar to Yersinia pestis CO92 YPO1697 and Yersinia pestis KIM y1859 gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1722 YP_1723 YP1723 YP_1723 1905238 1905822 - putative exported protein similar to Yersinia pestis CO92 YPO1698 and Yersinia pestis KIM y1860. Contains MIP family (Interpro|IPR000425%2C (GO:0016020)) gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1723 YP_1724 YP1724 YP_1724 1905816 1906358 - putative exported protein similar to Yersinia pestis CO92 YPO1699 and Yersinia pestis KIM y1861. gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1724 YP_1725 YP1725 YP_1725 1906352 1906906 - putative exported protein similar to Yersinia pestis CO92 YPO1700 and Yersinia pestis KIM y1862. Contains SecY protein (Interpro|IPR002208%2C (GO:0009306)%2C (GO:0016020)) gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1725 YP_1726 YP1726 pqiB2 pqiB2 1907386 1910043 - Paraquat-inducible protein B similar to Yersinia pestis KIM y1863 gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1726 YP_1727 YP1727 pqiA2 pqiA2 1910006 1911358 - putative membrane protein similar to Yersinia pestis CO92 YPO1702 and Yersinia pestis KIM y1864. Contains Conserved hypothetical protein 155 (Interpro|IPR005219) gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1727 YP_1728 YP1728 YP_1728 1911485 1911982 + GAF domain-containing protein similar to Yersinia pestis CO92 YPO1703. Contains GAF domain (Interpro|IPR003018) gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1728 YP_1729 YP1729 proQ proQ 1912078 1912791 + ProP effector similar to Yersinia pestis CO92 YPO1704 and Yersinia pestis KIM proQ gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1729 YP_1730 YP1730 prc prc 1912763 1914883 + tail-specific protease precursor similar to Yersinia pestis CO92 YPO1705 and Yersinia pestis KIM prc. Contains PDZ/DHR/GLGF domain (Interpro|IPR001478%2C (GO:0007242)). Contains Tail specific protease (Interpro|IPR003581%2C (GO:0008233)). Contains Carboxyl-terminal protease (Interpro|IPR004447%2C (GO:0006508)%2C (GO:0008236)) gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1730 YP_1731 YP1731 htpX1 htpX1 1915338 1916219 + putative heat shock protein similar to Yersinia pestis CO92 YPO1706 and Yersinia pestis KIM htpX. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Peptidase family M48 (Interpro|IPR001915%2C (GO:0016020)) gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1731 YP_1732 YP1732 fimA2 fimA2 1916877 1917419 + putative fimbrial protein similar to Yersinia pestis CO92 YPO1707 and Yersinia pestis KIM y1869. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1732 YP_1733 YP1733 ecpD1 ecpD1 1917572 1918351 + putative chaperone protein similar to Yersinia pestis CO92 YPO1708 and Yersinia pestis KIM ecpD. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)). Contains HMW glutenin (Interpro|IPR001419%2C (GO:0045735)). Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1733 YP_1734 YP1734 fimD4 fimD4 1918433 1921045 + putative outer membrane usher protein similar to Yersinia pestis CO92 YPO1709 and Yersinia pestis KIM y1871. Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C (GO:0016020)) gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1734 YP_1735 YP1735 fimA3 fimA3 1921036 1922205 + putative fimbrial component similar to Yersinia pestis KIM y1872. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1735 YP_1736 YP1736 fimC5 fimC5 1922202 1923005 + putative chaperone protein similar to Yersinia pestis CO92 YPO1711 and Yersinia pestis KIM y1873. Contains Flavin-containing monooxygenase FMO (Interpro|IPR000960%2C (GO:0006118)). Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1736 YP_1737 YP1737 proP18 proP18 1923059 1924426 - putative transport protein similar to Yersinia pestis CO92 YPO1712 and Yersinia pestis KIM y1874. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains HtrA/DegQ protease (Interpro|IPR001940%2C (GO:0006508)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1737 YP_1738 YP1738 ogl ogl 1924753 1925919 + oligogalacturonate lyase similar to Yersinia pestis CO92 ogl and Yersinia pestis KIM ogl gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1738 YP_1739 YP1739 kdgR kdgR 1926106 1926897 + IclR-family transcriptional regulatory protein similar to Yersinia pestis CO92 kdgR and Yersinia pestis KIM y1876. Contains Bacterial regulatory proteins%2C IclR family (Interpro|IPR005471%2C (GO:0006355)) gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1739 YP_1740 YP1740 ampD2 ampD2 1927282 1928133 + putative N-acetylmuramoyl-L-alanine amidase similar to Yersinia pestis CO92 YPO1715 and Yersinia pestis KIM y1877. Contains N-acetylmuramoyl-L-alanine amidase%2C family 2 (Interpro|IPR002502%2C (GO:0009253)) gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1740 YP_1741 YP1741 YP_1741 1928348 1929745 - putative transport protein similar to Yersinia pestis CO92 YPO1716 and Yersinia pestis KIM y1878. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Blood group Rhesus C/E and D polypeptide (Interpro|IPR002229) gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1741 YP_1742 YP1742 YP_1742 1929943 1930491 - putative membrane protein similar to Yersinia pestis CO92 YPO1717 and Yersinia pestis KIM y1879 gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1742 YP_1743 YP1743 YP_1743 1930971 1931681 - putative exported protein similar to Yersinia pestis CO92 YPO1718 and Yersinia pestis KIM y1880 gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1743 YP_1744 YP1744 togB togB 1931979 1933271 - putative sugar-binding protein similar to Yersinia pestis CO92 YPO1719 and Yersinia pestis KIM togB. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1744 YP_1745 YP1745 togA togA 1933287 1934414 - putative sugar ABC transporter similar to Yersinia pestis CO92 YPO1720 and Yersinia pestis KIM togA. Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1745 YP_1746 YP1746 malG3 malG3 1934428 1935348 - putative sugar ABC transporter (permease) similar to Yersinia pestis CO92 YPO1721. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1746 YP_1747 YP1747 togM togM 1935341 1936231 - putative ABC sugar transporter (permease) similar to Yersinia pestis CO92 YPO1722 and Yersinia pestis KIM togM. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1747 YP_1748 YP1748 pelW pelW 1936272 1937939 - exopolygalacturonate lyase similar to Yersinia pestis CO92 pelW and Yersinia pestis KIM y1885 gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1748 YP_1749 YP1749 kduD kduD 1938275 1939081 - 2-deoxy-D-gluconate 3-dehydrogenase similar to Yersinia pestis KIM kduD. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1749 YP_1750 YP1750 kduI kduI 1939128 1939964 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase similar to Yersinia pestis CO92 kduI and Yersinia pestis KIM kduI. Contains 5-keto 4-deoxyuronate isomerase (Interpro|IPR007045) gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1750 YP_1751 YP1751 kdgF kdgF 1940300 1940650 + similar to Yersinia pestis KIM kdgF%2C residues 1 to 109 are similar to Yersinia pestis CO92 kdgF. The stop codon of this CDS locates in the IS elment IS285%2C so this CDS is probable a pseudogene. pseudogene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1751 YP_1752 YP1752 YP_1752 1940698 1941906 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1752 YP_1753 YP1753 YP_1753 1942209 1942775 + putative exported protein similar to Yersinia pestis CO92 YPO1624 and Yersinia pestis KIM y1782. Contains Galactokinase/homoserine kinase (Interpro|IPR001174%2C (GO:0016301)) gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1753 YP_1754 YP1754 mfd mfd 1943014 1946460 - transcription-repair coupling factor similar to Yersinia pestis CO92 mfd and Yersinia pestis KIM mfd. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Transcription-repair coupling factor (Interpro|IPR004576%2C (GO:0006281)). Contains TRCF domain (Interpro|IPR005118) gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1754 YP_1755 YP1755 YP_1755 1946730 1947929 + lipoprotein releasing system%2C transmembrane protein similar to Yersinia pestis CO92 YPO1626 and Yersinia pestis KIM y1785. Contains Protein of unknown function DUF214 (Interpro|IPR003838) gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1755 YP_1756 YP1756 phnL5 phnL5 1947926 1948630 + lipoprotein releasing system%2C ATP-binding protein similar to Yersinia pestis CO92 YPO1627 and Yersinia pestis KIM y1786. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1756 YP_1757 YP1757 YP_1757 1948627 1949877 + lipoprotein releasing system%2C transmembrane protein similar to Yersinia pestis CO92 YPO1628 and Yersinia pestis KIM y1787. Contains Protein of unknown function DUF214 (Interpro|IPR003838) gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1757 YP_1758 YP1758 nagC4 nagC4 1949878 1950666 + Transcriptional regulators similar to Yersinia pestis CO92 YPO1629 and Yersinia pestis KIM y1788. Contains ROK family (Interpro|IPR000600). Contains GTP1/OBG family (Interpro|IPR006073) gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1758 YP_1759 YP1759 nagC5 nagC5 1950644 1950811 + Transcriptional regulators similar to Yersinia pestis KIM y1789. Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)) gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1759 YP_1760 YP1760 cobB cobB 1950860 1951696 + putative Sir2 family protein similar to Yersinia pestis CO92 YPO1630 and Yersinia pestis KIM cobB. Contains Silent information regulator protein Sir2 (Interpro|IPR003000%2C (GO:0006355)) gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1760 YP_1761 YP1761 pepT pepT 1951996 1953261 + putative peptidase T similar to Yersinia pestis KIM pepT. Contains ArgE/dapE/ACY1/CPG2/yscS (Interpro|IPR001261%2C (GO:0006508)%2C (GO:0008237)). Contains Peptidase M20/M25/M40 (Interpro|IPR002933%2C (GO:0006508)%2C (GO:0008237)) gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1761 YP_1762 YP1762 YP_1762 1953494 1954615 - hypothetical protein similar to Yersinia pestis KIM y1792. Contains Transcription factor jumonji%2C jmjC (Interpro|IPR003347). Contains Cupin domain (Interpro|IPR007113) gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1762 YP_1763 YP1763 phoQ phoQ 1954699 1956153 - sensor protein kinase similar to Yersinia pestis CO92 phoQ and Yersinia pestis KIM phoQ. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1763 YP_1764 YP1764 phoP phoP 1956159 1956830 - response regulator protein similar to Yersinia pestis CO92 phoP and Yersinia pestis KIM phoP. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1764 YP_1765 YP1765 YP_1765 1957041 1957664 - putative lipoprotein similar to Yersinia pestis CO92 YPO1635 and Yersinia pestis KIM y1795 gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1765 YP_1766 YP1766 purB purB 1957852 1959231 - adenylosuccinate lyase similar to Yersinia pestis CO92 purB and Yersinia pestis KIM purB. Contains Fumarate lyase (Interpro|IPR000362%2C (GO:0003824)). Contains Delta crystallin (Interpro|IPR003031). Contains Adenylosuccinate lyase (Interpro|IPR004769%2C (GO:0009152)) gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1766 YP_1767 YP1767 YP_1767 1959283 1959909 - Uncharacterized protein involved in purine metabolism similar to Yersinia pestis CO92 YPO1637 and Yersinia pestis KIM y1798 gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1767 YP_1768 YP1768 trmU trmU 1959967 1961082 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase similar to Yersinia pestis CO92 YPO1638 and Yersinia pestis KIM y1799. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)). Contains tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (Interpro|IPR004506%2C (GO:0008033)) gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1768 YP_1769 YP1769 mutT3 mutT3 1961269 1961715 - NTP pyrophosphohydrolases including oxidative damage repair enzymes similar to Yersinia pestis CO92 YPO1639 and Yersinia pestis KIM y1800. Contains NUDIX hydrolase (Interpro|IPR000086) gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1769 YP_1770 YP1770 rsuA2 rsuA2 1961708 1962334 - putative pseudouridine synthase similar to Yersinia pestis CO92 YPO1640 and Yersinia pestis KIM y1801. Contains Pseudouridine synthase%2C Rsu (Interpro|IPR000748%2C (GO:0004730)). Contains Pseudouridine synthase (Interpro|IPR006145) gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1770 YP_1771 YP1771 icdA icdA 1962414 1963718 + isocitrate dehydrogenase (NADP) similar to Yersinia pestis CO92 icdA and Yersinia pestis KIM icdA. Contains Isocitrate/isopropylmalate dehydrogenase (Interpro|IPR001804%2C (GO:0008152)%2C (GO:0016491)). Contains Isocitrate dehydrogenase NADP-dependent%2C prok type (Interpro|IPR004439%2C (GO:0006099)) gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1771 YP_1772 YP1772 purR4 purR4 1963864 1964907 - sucrose operon repressor LacI-family similar to Yersinia pestis CO92 YPO1642 and Yersinia pestis KIM y1803. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1772 YP_1773 YP1773 YP_1773 1965183 1965443 - hypothetical protein similar to Yersinia pestis CO92 YPO1643 and Yersinia pestis KIM y1804 gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1773 YP_1774 YP1774 aer aer 1965563 1967200 - putative methyl-accepting chemotaxis protein similar to Yersinia pestis CO92 YPO1644 and Yersinia pestis KIM aer. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains PAC motif (Interpro|IPR001610%2C (GO:0007165)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)) gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1774 YP_1775 YP1775 YP_1775 1968063 1968920 - putative nucleoside-diphosphate-sugar epimerases similar to Yersinia pestis CO92 YPO1645 and Yersinia pestis KIM y1806 gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1775 YP_1776 YP1776 YP_1776 1968951 1969463 + putative transcriptional regulators similar to Yersinia pestis KIM y1807. Contains Protein of unknown function DUF24 (Interpro|IPR002577) gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1776 YP_1777 YP1777 YP_1777 1969521 1969694 + hypothetical protein similar to Yersinia pestis KIM y1808. gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1777 YP_1778 YP1778 appA appA 1969995 1971320 + putative histidine acid phosphatase similar to Yersinia pestis CO92 YPO1648 and Yersinia pestis KIM appA. Contains Histidine acid phosphatase (Interpro|IPR000560%2C (GO:0003993)) gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1778 YP_1779 YP1779 YP_1779 1971622 1971837 - hypothetical protein similar to Yersinia pestis CO92 YPO1649 and Yersinia pestis KIM y1811. gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1779 YP_1780 YP1780 YP_1780 1972128 1973027 - hypothetical protein similar to Yersinia pestis CO92 YPO1650 and Yersinia pestis KIM y1812. gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1780 YP_1781 YP1781 lrp3 lrp3 1973119 1973568 - AsnC-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO1651 and Yersinia pestis KIM y1813. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)) gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1781 YP_1783 YP1783 YP_1783 1974081 1974614 - putative membrane protein similar to Yersinia pestis CO92 YPO1652 and Yersinia pestis KIM y1815 gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1783 YP_1784 YP1784 qor2 qor2 1974897 1975943 - putative Zinc-binding dehydrogenase similar to Yersinia pestis CO92 YPO1653 and Yersinia pestis KIM y1816. Contains Ribosomal protein S2 (Interpro|IPR001865%2C (GO:0006412)). Contains Zinc-containing alcohol dehydrogenase superfamily (Interpro|IPR002085%2C (GO:0008270)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1784 YP_1785 YP1785 lacZ lacZ 1976314 1979496 - beta-galactosidase similar to Yersinia pestis CO92 lacZ and Yersinia pestis KIM lacZ. Contains Glycoside hydrolase%2C family 42%2C small chain%2C N-terminal (Interpro|IPR004199%2C (GO:0009341)). Contains Glycoside hydrolase%2C family 42%2C small chain%2C C-terminal (Interpro|IPR004200%2C (GO:0009341)). Contains Glycoside hydrolase%2C family 2 (Interpro|IPR006101%2C (GO:0005975)). Contains Glycoside hydrolase family 2%2C immunoglobulin-like beta-sandwich domain (Interpro|IPR006102%2C (GO:0005975)). Contains Glycoside hydrolase%2C family 2%2C TIM barrel domain (Interpro|IPR006103%2C (GO:0005975)). Contains Glycoside hydrolase%2C family 2%2C sugar binding (Interpro|IPR006104%2C (GO:0005975)) gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1785 YP_1786 YP1786 cspC3 cspC3 1980037 1980249 + cold shock protein similar to Yersinia pestis CO92 YPO1655. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1786 YP_1787 YP1787 dsrB dsrB 1980422 1980655 + Dextransucrase DSRB similar to Yersinia pestis CO92 YPO1656 and Yersinia pestis KIM dsrB. gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1787 YP_1788 YP1788 cheM cheM 1980838 1982572 - similar to gi|16764970|ref|NP_460585.1| (NC_003197) methyl-accepting chemotaxis protein III%2C ribose and galactose sensor receptor [Salmonella typhimurium LT2](len:541 aa). There is a frameshift after codon 409. The sequence has been checked and believed to be right. pseudogene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1788 YP_1790 YP1790 mgtC mgtC 1983686 1984396 + Mg(2+) transport ATPase protein C similar to Yersinia pestis CO92 mgtC and Yersinia pestis KIM mgtC. Contains MgtC/SapB transporter (Interpro|IPR003416) gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1790 YP_1791 YP1791 mgtB mgtB 1984797 1987496 + Mg(2+) transport ATPase protein B similar to Yersinia pestis CO92 mgtB and Yersinia pestis KIM mgtA. Contains H+ transporting ATPase%2C proton pump (Interpro|IPR000695%2C (GO:0016020)). Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Cation transporting ATPase%2C N terminal (Interpro|IPR004014%2C (GO:0006812)%2C (GO:0016020)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains Cation transporting ATPase (Interpro|IPR006069%2C (GO:0006812)%2C (GO:0016020)). Contains Magnesium-translocating P-type ATPase (Interpro|IPR006415) gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1791 YP_1792 YP1792 flhD flhD 1988675 1989035 + len: 88 aa%3B Best Blastp hit %3D gi|7387661|sp|O86046|FLHD_YEREN Flagellar transcriptional activator flhD%2C gi|3411276|gb|AAC31210.1| (AF081587) flagellar biosynthesis regulatory protein FlhD [Yersinia enterocolitica]%2C(len:119 aa). There is a frameshift after codon 83. The sequence has been checked and is believed to be correct. pseudogene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1792 YP_1793 YP1793 flhC flhC 1989036 1989620 + flagellum biosynthesis transcription activator similar to Yersinia pestis CO92 flhC and Yersinia pestis KIM flhC. gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1793 YP_1794 YP1794 motA1 motA1 1989825 1990712 + chemotaxis MotA protein similar to Yersinia pestis CO92 motA and Yersinia pestis KIM motA. Contains Flagellar motor protein MotA (Interpro|IPR000540%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0016020)). Contains Flagellar motor protein MotA (Interpro|IPR000540%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0016020)). Contains MotA/TolQ/ExbB proton channel (Interpro|IPR002898%2C (GO:0006810)%2C (GO:0016020)) gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1794 YP_1795 YP1795 motB1 motB1 1990709 1992010 + chemotaxis MotB protein similar to Yersinia pestis CO92 motB and Yersinia pestis KIM motB. Contains OmpA/MotB domain (Interpro|IPR006665). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1795 YP_1796 YP1796 cheA cheA 1992021 1994192 + chemotaxis protein CheA similar to Yersinia pestis CO92 cheA and Yersinia pestis KIM cheA. Contains Serine proteases%2C subtilase family (Interpro|IPR000209%2C (GO:0006508)). Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)). Contains CheW-like protein (Interpro|IPR002545%2C (GO:0007165)). Contains Hpt domain (Interpro|IPR002570%2C (GO:0007165)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Signal transducing histidine kinase%2C homodimeric domain (Interpro|IPR004105%2C (GO:0007165)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1796 YP_1797 YP1797 cheW cheW 1994355 1994852 + chemotaxis protein CheW similar to Yersinia pestis CO92 cheW and Yersinia pestis KIM cheW. Contains CheW-like protein (Interpro|IPR002545%2C (GO:0007165)) gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1797 YP_1798 YP1798 proP19 proP19 1995144 1996379 - putative membrane protein similar to Yersinia pestis CO92 YPO1668 and Yersinia pestis KIM y1829. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1798 YP_1799 YP1799 tdcF1 tdcF1 1996392 1996799 - YjgF-family lipoprotein similar to Yersinia pestis CO92 YPO1669 and Yersinia pestis KIM y1830. Contains YjgF-like protein (Interpro|IPR006056). Contains Endoribonuclease L-PSP (Interpro|IPR006175) gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1799 YP_1800 YP1800 sgaU sgaU 1996766 1997752 - Putative L-xylulose-5-phosphate 3-epimerase similar to Yersinia pestis CO92 YPO1670 and Yersinia pestis KIM y1831 gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1800 YP_1801 YP1801 YP_1801 1997930 1998607 + putative DNA-binding protein similar to Yersinia pestis CO92 YPO1671 and Yersinia pestis KIM y1832. gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1801 YP_1802 YP1802 YP_1802 1998808 2000016 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1802 YP_1803 YP1803 YP_1803 2000405 2004211 + putative outer membrane protein similar to Yersinia pestis CO92 YPO1672 and Yersinia pestis KIM y1834. Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Phosphopantetheine attachment site (Interpro|IPR006162). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1803 YP_1804 YP1804 YP_1804 2004739 2007615 + putative integral membrane protein similar to Yersinia pestis CO92 YPO1673 and Yersinia pestis KIM y1835. Contains Acriflavin resistance protein (Interpro|IPR001036) gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1804 YP_1805 YP1805 YP_1805 2007684 2008385 + putative lipoprotein similar to Yersinia pestis CO92 YPO1674 and Yersinia pestis KIM y1836. gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1805 YP_1806 YP1806 cheD1 cheD1 2008626 2010299 + methyl-accepting chemotaxis protein similar to Yersinia pestis CO92 cheD and Yersinia pestis KIM tsr. Contains Ligand binding Tar (Interpro|IPR003122%2C (GO:0016020)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)). Contains Aspartate chemoreceptor protein (Interpro|IPR004091%2C (GO:0016020)). Contains Ligand binding Tar (Interpro|IPR003122%2C (GO:0016020)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)) gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1806 YP_1807 YP1807 tap tap 2010483 2012093 + methyl-accepting chemotaxis protein IV%2C peptide sensor receptor similar to Yersinia pestis KIM tap. Contains Ligand binding Tar (Interpro|IPR003122%2C (GO:0016020)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)). Contains Aspartate chemoreceptor protein (Interpro|IPR004091%2C (GO:0016020)) gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1807 YP_1808 YP1808 cheR cheR 2012251 2013138 + protein glutamate methyltransferase similar to Yersinia pestis KIM cheR. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains MCP methyltransferase%2C CheR-type (Interpro|IPR000780%2C (GO:0006935)%2C (GO:0008757)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)) gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1808 YP_1809 YP1809 cheB cheB 2013135 2014187 + protein-glutamate methylesterase similar to Yersinia pestis CO92 cheB and Yersinia pestis KIM cheB. Contains CheB methylesterase (Interpro|IPR000673%2C (GO:0007165)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1809 YP_1810 YP1810 cheY cheY 2014282 2014677 + chemotaxis protein CheY similar to Yersinia pestis CO92 cheY and Yersinia pestis KIM cheY. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1810 YP_1811 YP1811 cheZ cheZ 2014687 2015331 + chemotaxis protein CheZ similar to Yersinia pestis CO92 cheZ and Yersinia pestis KIM cheZ gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1811 YP_1812 YP1812 ampD3 ampD3 2015902 2016666 + putative N-acetylmuramoyl-L-alanine amidase similar to Yersinia pestis CO92 YPO1683 and Yersinia pestis KIM y1845. Contains N-acetylmuramoyl-L-alanine amidase%2C family 2 (Interpro|IPR002502%2C (GO:0009253)) gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1812 YP_1813 YP1813 YP_1813 2017023 2019654 + similar to the C-terminal parts of: Xylella fastidiosa surface protein Xf1981 TR:Q9PC04(EMBL:AE004017) (1190 aa) and to Xylella fastidiosa surface protein Xf1529 TR:Q9PD50 (EMBL:AE003982) (2059 aa). There is apossible frameshift after codon 701. The sequence has been checked and is believed to be correct. Contains Pollen allergen Poa pIX/Phl pVI%2C C-terminal (Interpro|IPR001778). Contains YadA-like%2C C-terminal (Interpro|IPR005594) pseudogene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1813 YP_1814 YP1814 YP_1814 2019754 2020707 + putative exported protein similar to Yersinia pestis CO92 YPO1686 and Yersinia pestis KIM y1848 gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1814 YP_1815 YP1815 YP_1815 2021061 2022269 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1815 YP_1816 YP1816 YP_1816 2022303 2022989 - similar to gi|16121947|ref|NP_405260.1| (NC_003143) putative alanine racemase [Yersinia pestis] and gi|22125742|ref|NP_669165.1| (NC_004088) putative alanine racemase [Yersinia pestis KIM] (409 aa). Tis CDS has been disrupted by IS285 element and lost the N-termial residues. Contains Alanine racemase (Interpro|IPR000821%2C (GO:0006522)%2C (GO:0008784)). Contains Protein of unknown function UPF0001 (Interpro|IPR001608) pseudogene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1816 YP_1817 YP1817 YP_1817 2023380 2023574 - hypothetical protein similar to Yersinia pestis KIM y1850 gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1817 YP_1818 YP1818 YP_1818 2024125 2024373 + hypothetical protein similar to Yersinia pestis CO92 YPO1688 and Yersinia pestis KIM y1851 gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1818 YP_1819 YP1819 rssA1 rssA1 2024766 2026022 + putative lipoprotein similar to Yersinia pestis CO92 YPO1689 and Yersinia pestis KIM y1852. Contains Patatin (Interpro|IPR002641%2C (GO:0045735)) gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1819 YP_1820 YP1820 YP_1820 2026177 2026410 + hypothetical protein similar to Yersinia pestis CO92 YPO1690 gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1820 YP_1821 YP1821 dnaC_15 dnaC_15 2026953 2027735 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1821 YP_1822 YP1822 YP_1822 2027732 2028754 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1822 YP_1823 YP1823 hutC2 hutC2 2028843 2029268 - similar to N-terminal 142 residues of putative GntR-family transcriptional regulatory protein in Yersina pestis%2C such as gi|16122217|ref|NP_405530.1| (NC_003143) putative GntR-family transcriptional regulatory protein [Yersinia pestis]%2C gi|22126224|ref|NP_669647.1| (NC_004088) putative repressor [Yersinia pestis KIM]%2C gi|11277577|pir||T46987 hypothetical protein hutC [imported] - Yersinia pestis%2C gi|4106575|emb|CAA21330.1| (AL031866) ORF8%3B this CDS has been disrupted by IS100 element and the C-treminal located in the range from basepair 1897094 to 1897435 (complement)%3B The rearrangement has been confirmed. pseudogene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1823 YP_1824 YP1824 ssnA ssnA 2029362 2030786 + putative chlorohydrolase similar to Yersinia pestis CO92 YPO1974 and Yersinia pestis KIM y2338. Contains Amidohydrolase (Interpro|IPR006680) gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1824 YP_1825 YP1825 YP_1825 2030786 2031358 + hypothetical protein similar to Yersinia pestis CO92 YPO1975 and Yersinia pestis KIM y2337 gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1825 YP_1826 YP1826 trpE1 trpE1 2031536 2033512 - Anthranilate/para-aminobenzoate synthases component I similar to Yersinia pestis CO92 YPO1976. Contains Anthranilate synthase component I and chorismate binding protein (Interpro|IPR005801%2C (GO:0009058)) gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1826 YP_1827 YP1827 fabH1 fabH1 2034149 2035157 + similar to Salmonella typhimurium 3-oxoacyl-[acyl-carrier-protein] synthase III SW:FABH_SALTY (O85139) (317 aa) and to Xanthomonas campestris GumO TR:O34266 (EMBL:U70053) (435 aa). There is a possible frameshift after codon 158. The sequence has been checked and is believed to be correct. pseudogene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1827 YP_1828 YP1828 wcaG6 wcaG6 2035171 2036187 + putative dehydrogenase similar to Yersinia pestis CO92 YPO1979 and Yersinia pestis KIM y2333. Contains Eukaryotic thiol (cysteine) protease (Interpro|IPR000169%2C (GO:0006508)) gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1828 YP_1829 YP1829 gloB2 gloB2 2036135 2036986 + Zn-dependent hydrolases%2C including glyoxylases similar to Yersinia pestis CO92 YPO1980 and Yersinia pestis KIM y2332. gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1829 YP_1830 YP1830 paaK paaK 2036983 2038269 + putative coenzyme synthetase similar to Yersinia pestis CO92 YPO1981 gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1830 YP_1831 YP1831 wcaG7 wcaG7 2038403 2040199 + Nucleoside-diphosphate-sugar epimerases Best Blastp hit %3D gi|16122225|ref|NP_405538.1| (NC_003143) putative glycosyl transferase [Yersinia pestis]%2C gi|15979996|emb|CAC90796.1| (AJ414150) putative glycosyl transferase [Yersinia pestis]%2C(len:384 aa) gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1831 YP_1832 YP1832 YP_1832 2040196 2040780 + hypothetical protein similar to Yersinia pestis CO92 YPO1984 and Yersinia pestis KIM y2327 gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1832 YP_1833 YP1833 YP_1833 2040777 2041760 + similar to Yersinia pestis CO92 YPO1985 and Yersinia pestis KIM y2326. This CDS seems to lose the C-ternial 71 aa. It is not clear whether this deletion effects the function. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230) pseudogene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1833 YP_1834 YP1834 YP_1834 2041714 2042283 - hypothetical protein similar to Yersinia pestis KIM y2324(residues 1 to 179 of 189 are similar to residues 1 to 179 of 552 from Yersinia pestis KIM y2324) gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1834 YP_1835 YP1835 YP_1835 2042402 2043610 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1835 YP_1836 YP1836 YP_1836 2043730 2045892 - putative exported protein similar to Yersinia pestis CO92 YPO1989 and Yersinia pestis KIM y2322. Contains Sel1-like repeat (Interpro|IPR006597) gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1836 YP_1837 YP1837 YP_1837 2046471 2048582 + hypothetical protein similar to Yersinia pestis KIM y2321. Contains TPR repeat (Interpro|IPR001440). Contains Sel1-like repeat (Interpro|IPR006597) gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1837 YP_1838 YP1838 rpiB2 rpiB2 2048829 2049467 + putative sugar-phosphate isomerase similar to Yersinia pestis CO92 YPO1991 and Yersinia pestis KIM y2319 gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1838 YP_1839 YP1839 smtA4 smtA4 2049602 2050261 - SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO1992 and Yersinia pestis KIM y2318. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)) gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1839 YP_1840 YP1840 fabG8 fabG8 2050366 2051046 - putative dehydrogenase similar to Yersinia pestis CO92 YPO1993 and Yersinia pestis KIM y2317. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1840 YP_1841 YP1841 YP_1841 2051387 2052337 - hypothetical protein similar to Yersinia pestis CO92 YPO1994 and Yersinia pestis KIM y2316 gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1841 YP_1842 YP1842 YP_1842 2052324 2053256 - hypothetical protein similar to Yersinia pestis CO92 YPO1995 and Yersinia pestis KIM y2315 gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1842 YP_1843 YP1843 YP_1843 2053262 2054167 - hypothetical protein similar to Yersinia pestis CO92 YPO1996 and Yersinia pestis KIM y2313 gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1843 YP_1844 YP1844 mhpC2 mhpC2 2054958 2056031 - putative exported protein similar to Yersinia pestis CO92 YPO1997 and Yersinia pestis KIM y2312. gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1844 YP_1845 YP1845 YP_1845 2056244 2056714 - putative exported protein similar to Yersinia pestis CO92 YPO1998 and Yersinia pestis KIM y2311. Contains Cupin domain (Interpro|IPR007113) gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1845 YP_1846 YP1846 YP_1846 2056769 2057191 - putative decarboxylase similar to Yersinia pestis CO92 YPO1999. Contains Carboxymuconolactone decarboxylase (Interpro|IPR003779%2C (GO:0006725)) gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1846 YP_1847 YP1847 baeS4 baeS4 2057468 2058859 - putative two-component system sensor protein similar to Yersinia pestis CO92 YPO2000 and Yersinia pestis KIM y2308. Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)). Contains Heavy metal sensor kinase (Interpro|IPR006290) gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1847 YP_1848 YP1848 copR copR 2058865 2059557 - transcriptional activator similar to Yersinia pestis CO92 copR and Yersinia pestis KIM y2307. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)). Contains Heavy metal response regulator (Interpro|IPR006291) gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1848 YP_1849 YP1849 YP_1849 2059822 2060913 + hydrolase of the alpha/beta superfamily similar to Yersinia pestis CO92 YPO2002 and Yersinia pestis KIM y2306. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1849 YP_1850 YP1850 mdaB2 mdaB2 2061062 2061769 + putative exported protein similar to Yersinia pestis CO92 YPO2003 and Yersinia pestis KIM y2305. gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1850 YP_1851 YP1851 YP_1851 2061784 2062479 + putative membrane protein similar to Yersinia pestis CO92 YPO2004 and Yersinia pestis KIM y2304 gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1851 YP_1852 YP1852 YP_1852 2062687 2063529 - hypothetical protein similar to Yersinia pestis KIM y2303 gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1852 YP_1853 YP1853 YP_1853 2064160 2064816 + hypothetical protein similar to Yersinia pestis CO92 YPO2006 and Yersinia pestis KIM y2302. gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1853 YP_1854 YP1854 aes1 aes1 2064813 2065643 + putative esterase similar to Yersinia pestis CO92 YPO2007 and Yersinia pestis KIM y2301. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1854 YP_1855 YP1855 pspE2 pspE2 2065597 2066049 + putative rhodanese-like protein similar to Yersinia pestis CO92 YPO2008 and Yersinia pestis KIM y2300. Contains Rhodanese-like (Interpro|IPR001763) gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1855 YP_1856 YP1856 tra5D tra5D 2066097 2066606 - putative integrase core domain protein similar to Yersinia pestis CO92 YPO2009 and Yersinia pestis KIM y2299. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1856 YP_1857 YP1857 YP_1857 2066624 2067025 - Transposase Best Blastp hit %3D gi|16122252|ref|NP_405565.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]%2C gi|15980024|emb|CAC90823.1| (AJ414151) conserved hypothetical protein [Yersinia pestis]%2C(len:104 aa) gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1857 YP_1858 YP1858 YP_1858 2067235 2068326 - putative GTPase similar to Yersinia pestis CO92 YPO2010 and Yersinia pestis KIM y2298. Contains Glutamine amidotransferase%2C class-II (Interpro|IPR000583%2C (GO:0008152)%2C (GO:0016003)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains Conserved hypothetical protein 92 (Interpro|IPR004396%2C (GO:0005554)). Contains GTP1/OBG family (Interpro|IPR006073) gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1858 YP_1859 YP1859 pth pth 2068490 2069110 - peptidyl-tRNA hydrolase similar to Yersinia pestis CO92 pth and Yersinia pestis KIM pth. Contains Peptidyl-tRNA hydrolase (Interpro|IPR001328%2C (GO:0006412)) gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1859 YP_1860 YP1860 YP_1860 2069442 2069714 + putative membrane protein similar to Yersinia pestis CO92 YPO2012 and Yersinia pestis KIM y2296 gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1860 YP_1861 YP1861 prsA prsA 2069916 2070881 - phosphoribosylpyrophosphate synthetase similar to Yersinia pestis KIM prsA. Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Phosphoribosyl pyrophosphate synthetase (Interpro|IPR000842%2C (GO:0016978)). Contains Purine/pyrimidine phosphoribosyl transferase (Interpro|IPR002375). Contains Ribose-phosphate pyrophosphokinase (Interpro|IPR005946%2C (GO:0009165)) gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1861 YP_1862 YP1862 ipk ipk 2071204 2072103 - putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase similar to Yersinia pestis CO92 ipk and Yersinia pestis KIM y2293. Contains 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (Interpro|IPR004424%2C (GO:0016114)). Contains GHMP kinase (Interpro|IPR006204) gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1862 YP_1863 YP1863 lolB lolB 2072105 2072728 - putative lipoprotein similar to Yersinia pestis CO92 YPO2015. Contains Outer membrane lipoprotein LolB (Interpro|IPR004565%2C Cellular Component: external outer membrane (sensu Gram-negative Bacteria) (GO:0009279)%2C (GO:0015031)) gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1863 YP_1864 YP1864 hemA hemA 2072980 2074305 + glutamyl-tRNA reductase similar to Yersinia pestis CO92 hemA and Yersinia pestis KIM hemA. Contains Glutamyl-tRNA reductase (Interpro|IPR000343%2C (GO:0006779)%2C (GO:0008883)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1864 YP_1865 YP1865 prfA prfA 2074328 2075410 + peptide chain release factor 1 similar to Yersinia pestis CO92 prfA and Yersinia pestis KIM prfA. Contains Class I peptide chain release factor domain (Interpro|IPR000352%2C (GO:0006415)). Contains Peptide chain release factor 1 (Interpro|IPR004373%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006415)%2C (GO:0016149)). Contains PCRF domain (Interpro|IPR005139) gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1865 YP_1866 YP1866 hemK1 hemK1 2075410 2076240 + putative protoporphyrinogen oxidase similar to Yersinia pestis CO92 YPO2018 and Yersinia pestis KIM hemK. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C N12 class (Interpro|IPR002296%2C (GO:0008170)). Contains Modification methylase HemK family (Interpro|IPR004556%2C (GO:0006479)%2C (GO:0008276)) gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1866 YP_1867 YP1867 YP_1867 2076304 2076705 + putative membrane protein similar to Yersinia pestis CO92 YPO2019 and Yersinia pestis KIM y2288 gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1867 YP_1868 YP1868 YP_1868 2076702 2077511 + hypothetical protein similar to Yersinia pestis CO92 YPO2020 and Yersinia pestis KIM y2287. Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)) gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1868 YP_1869 YP1869 kdsA kdsA 2077607 2078461 + 2-dehydro-3-deoxyphosphooctonate aldolase similar to Yersinia pestis CO92 kdsA and Yersinia pestis KIM kdsA. Contains DAHP synthetase I/KDSA superfamily (Interpro|IPR006218%2C (GO:0009058)%2C (GO:0016228)). Contains 2-dehydro-3-deoxyphosphooctonate aldolase (Interpro|IPR006269) gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1869 YP_1870 YP1870 sUL1 sUL1 2078815 2080512 - sulfate transporter similar to Yersinia pestis KIM y2285. Contains Sulphate transporter (Interpro|IPR001902%2C (GO:0016020)). Contains Sulfate transporter/antisigma-factor antagonist STAS (Interpro|IPR002645) gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1870 YP_1872 YP1872 ugpQ2 ugpQ2 2081587 2082462 - putative exported protein similar to Yersinia pestis CO92 YPO2028 and Yersinia pestis KIM y2283. Contains Glycerophosphoryl diester phosphodiesterase (Interpro|IPR004129%2C (GO:0006071)%2C (GO:0008889)) gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1872 YP_1873 YP1873 tbpA1 tbpA1 2082763 2083845 - putative ABC transporter periplasmic binding protein similar to Yersinia pestis KIM y2281. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1873 YP_1874 YP1874 potC1 potC1 2083865 2084701 - putative binding-protein-dependent transport system membrane protein similar to Yersinia pestis CO92 YPO2030 and Yersinia pestis KIM y2280. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1874 YP_1875 YP1875 potB1 potB1 2084698 2085564 - putative binding-protein-dependent transport system membrane protein similar to Yersinia pestis CO92 YPO2031 and Yersinia pestis KIM y2279. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1875 YP_1876 YP1876 YP_1876 2085561 2087352 - similar to many ABC transporter%2C such as AP003008-258|BAB52578.1| 387|Mesorhizobium loti ABC transporter ATP-binding component protein%3B disrupted by IS1541 element pseudogene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1876 YP_1877 YP1877 YP_1877 2086415 2086843 + putative transposase similar to Yersinia pestis KIM y1943. Contains Transposase IS200-like (Interpro|IPR002686) gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1877 YP_1878 YP1878 ugpQ3 ugpQ3 2087551 2088381 + Glycerophosphoryl diester phosphodiesterase similar to Yersinia pestis CO92 YPO2035 and Yersinia pestis KIM y2277. Contains Glycerophosphoryl diester phosphodiesterase (Interpro|IPR004129%2C (GO:0006071)%2C (GO:0008889)) gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1878 YP_1879 YP1879 nagC6 nagC6 2088353 2089507 + putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2036 and Yersinia pestis KIM y2276. Contains ROK family (Interpro|IPR000600) gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1879 YP_1880 YP1880 hIS2 hIS2 2090142 2090879 + Histidinol phosphatase and related hydrolases of the PHP family similar to Yersinia pestis CO92 YPO2037. Contains Phosphoesterase PHP%2C N-terminal (Interpro|IPR003141%2C (GO:0006260)). Contains PHP domain C-terminal region (Interpro|IPR004013) gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1880 YP_1881 YP1881 torD2 torD2 2090916 2091476 + putative component of anaerobic dehydrogenases similar to Yersinia pestis CO92 YPO2038 and Yersinia pestis KIM y2274 gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1881 YP_1882 YP1882 YP_1882 2091930 2092523 - hypothetical protein similar to Yersinia pestis KIM y2273 gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1882 YP_1883 YP1883 proP20 proP20 2092888 2094093 - putative membrane protein similar to Yersinia pestis CO92 YPO2040 and Yersinia pestis KIM y2272. Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1883 YP_1884 YP1884 rimJ rimJ 2094387 2094971 + ribosomal-protein-alanine acetyltransferase similar to Yersinia pestis CO92 rimJ and Yersinia pestis KIM rimJ. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1884 YP_1885 YP1885 mviM3 mviM3 2094979 2096589 + putative oxidoreductase similar to Yersinia pestis CO92 YPO2042 and Yersinia pestis KIM y2270. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)). Contains Oxidoreductase%2C C-terminal (Interpro|IPR004104%2C (GO:0008152)%2C (GO:0016491)) gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1885 YP_1886 YP1886 mviN mviN 2096856 2098391 + putative membrane protein similar to Yersinia pestis CO92 mviN and Yersinia pestis KIM mviN. Contains Protease-activated receptor (Interpro|IPR003912%2C (GO:0007596)%2C (GO:0016021)). Contains Virulence factor MVIN-like (Interpro|IPR004268%2C (GO:0016021)) gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1886 YP_1887 YP1887 fhaC1 fhaC1 2098839 2100500 + putative hemolysin activator protein similar to Yersinia pestis CO92 YPO2044 and Yersinia pestis KIM y2268. Contains Hemolysin activator HlyB (Interpro|IPR005565) gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1887 YP_1888 YP1888 YP_1888 2100530 2105261 + similar to Yersinia pestis CO92 YPO2045 and Yersinia pestis KIM y2267. There is a frameshift mutation following codon 990. The sequence has been checked and is believed to be correct. pseudogene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1888 YP_1889 YP1889 argS argS 2105492 2107222 - arginyl-tRNA synthetase similar to Yersinia pestis CO92 argS and Yersinia pestis KIM argS. Contains Arginyl-tRNA synthetase%2C class Ic (Interpro|IPR001278%2C (GO:0006420)). Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Arginyl tRNA synthetase N-terminal domain (Interpro|IPR005148) gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1889 YP_1890 YP1890 YP_1890 2107845 2108420 + hypothetical protein similar to Yersinia pestis CO92 YPO2047 and Yersinia pestis KIM y2264 gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1890 YP_1891 YP1891 cutC cutC 2108604 2109416 + putative copper homeostasis protein similar to Yersinia pestis CO92 cutC and Yersinia pestis KIM cutC. Contains CutC family (Interpro|IPR005627) gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1891 YP_1892 YP1892 smtA5 smtA5 2109609 2110580 - SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO2049 and Yersinia pestis KIM y2262 gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1892 YP_1893 YP1893 smtA6 smtA6 2110577 2111380 - SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO2050 and Yersinia pestis KIM y2261. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)). Contains Methyltransferase%2C putative (Interpro|IPR005271) gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1893 YP_1894 YP1894 YP_1894 2111571 2111966 - putative membrane protein similar to Yersinia pestis CO92 YPO2051 and Yersinia pestis KIM y2260 gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1894 YP_1895 YP1895 YP_1895 2112146 2112961 - hypothetical protein similar to Yersinia pestis CO92 YPO2052 and Yersinia pestis KIM y2259. Contains Protein of unknown function DUF72 (Interpro|IPR002763) gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1895 YP_1896 YP1896 aspS aspS 2114019 2115815 + aspartyl-tRNA synthetase similar to Yersinia pestis CO92 aspS and Yersinia pestis KIM aspS. Contains Aspartyl-tRNA synthetase%2C class IIb (Interpro|IPR002312%2C (GO:0006422)). Contains Lysyl-tRNA synthetase%2C class-2 (Interpro|IPR002313%2C (GO:0006430)). Contains GAD domain (Interpro|IPR004115%2C (GO:0006412)). Contains tRNA synthetase%2C class II (D%2C K and N) (Interpro|IPR004364%2C (GO:0006418)). Contains OB-fold nucleic acid binding domain (Interpro|IPR004365%2C (GO:0003676)). Contains Aspartyl-tRNA synthetase bacterial/mitochondrial type (Interpro|IPR004524%2C (GO:0006422)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1896 YP_1897 YP1897 nudB nudB 2115815 2116258 + putative dATP pyrophosphohydrolase similar to Yersinia pestis CO92 nudB and Yersinia pestis KIM ntpA. Contains NUDIX hydrolase (Interpro|IPR000086). Contains DATP pyrophosphohydrolase (Interpro|IPR003564%2C (GO:0006281)%2C (GO:0008828)) gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1897 YP_1898 YP1898 YP_1898 2116304 2117059 + hypothetical protein similar to Yersinia pestis CO92 YPO2055 and Yersinia pestis KIM y2255. Contains Phosphofructokinase (Interpro|IPR000023%2C (GO:0006096)). Contains Protein of unknown function DUF28 (Interpro|IPR002876) gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1898 YP_1899 YP1899 ruvC ruvC 2117268 2117789 + crossover junction endodeoxyribonuclease similar to Yersinia pestis CO92 ruvC and Yersinia pestis KIM ruvC. Contains Crossover junction endodeoxyribonuclease RuvC (Interpro|IPR002176%2C (GO:0016978)) gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1899 YP_1900 YP1900 ruvA ruvA 2118006 2118686 + Holliday junction helicase subunit B similar to Yersinia pestis KIM ruvA. Contains Bacterial DNA recombination protein%2C RuvA (Interpro|IPR000085%2C (GO:0006310)). Contains Helix-hairpin-helix motif (Interpro|IPR000445%2C (GO:0003677)). Contains Helix-hairpin-helix DNA-binding%2C class 1 (Interpro|IPR003583%2C (GO:0005622)) gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1900 YP_1901 YP1901 ruvB ruvB 2118848 2119852 + Holliday junction DNA helicase similar to Yersinia pestis CO92 ruvB and Yersinia pestis KIM ruvB. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Holliday junction DNA helicase RuvB (Interpro|IPR004605%2C (GO:0006310)%2C (GO:0009378)) gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1901 YP_1902 YP1902 znuB znuB 2119907 2120692 - high-affinity zinc uptake system membrane protein similar to Yersinia pestis CO92 znuB and Yersinia pestis KIM znuB. Contains ABC transporter%2C family 3 (Interpro|IPR001626%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1902 YP_1903 YP1903 znuC znuC 2120689 2121450 - high-affinity zinc uptake system ATP-binding protein similar to Yersinia pestis CO92 znuC and Yersinia pestis KIM znuC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1903 YP_1904 YP1904 znuA znuA 2121523 2122479 + exported high-affinity zinc uptake system protein similar to Yersinia pestis CO92 znuA and Yersinia pestis KIM znuA. Contains Periplasmic solute binding protein (Interpro|IPR006127%2C (GO:0030288)). Contains Adhesion lipoprotein (Interpro|IPR006128%2C (GO:0007155)). Contains Adhesin B (Interpro|IPR006129%2C (GO:0007155)) gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1904 YP_1905 YP1905 nlpD3 nlpD3 2122500 2123816 + putative M23/M37 peptidase-family protein similar to Yersinia pestis CO92 YPO2062 and Yersinia pestis KIM y2248. Contains Peptidoglycan-binding LysM (Interpro|IPR002482%2C (GO:0016998)). Contains Peptidase M23/M37 (Interpro|IPR002886%2C (GO:0006508)) gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1905 YP_1906 YP1906 msbB msbB 2124083 2125045 + lipid A biosynthesis acyltransferase similar to Yersinia pestis CO92 msbB and Yersinia pestis KIM msbB. Contains Bacterial lipid A biosynthesis acyltransferase (Interpro|IPR004960%2C (GO:0016021)) gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1906 YP_1907 YP1907 pykA pykA 2125385 2126827 - pyruvate kinase II similar to Yersinia pestis CO92 pykA and Yersinia pestis KIM pykA. Contains Pyruvate kinase (Interpro|IPR001697%2C (GO:0006096)) gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1907 YP_1908 YP1908 rpiR4 rpiR4 2127157 2128182 - Transcriptional regulators similar to Yersinia pestis KIM y2245. Contains Helix-turn-helix protein RpiR (Interpro|IPR000281%2C (GO:0006355)). Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)) gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1908 YP_1909 YP1909 zwf zwf 2128274 2129863 + glucose-6-phosphate 1-dehydrogenase similar to Yersinia pestis CO92 zwf and Yersinia pestis KIM zwf. Contains Glucose-6-phosphate dehydrogenase (Interpro|IPR001282%2C (GO:0006006)) gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1909 YP_1910 YP1910 eda eda 2130105 2130746 + KHG/KDPG aldolase similar to Yersinia pestis CO92 eda and Yersinia pestis KIM eda. Contains KDPG and KHG aldolase (Interpro|IPR000887%2C (GO:0008152)) gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1910 YP_1911 YP1911 emrE1 emrE1 2131575 2131904 + Membrane transporters of cations and cationic drugs Best Blastp hit %3D gi|16122307|ref|NP_405620.1| (NC_003143) putative integral membrane protein [Yersinia pestis]%2C gi|22126128|ref|NP_669551.1| (NC_004088) possible chaperone [Yersinia pestis KIM]%2C gi|15980079|emb|CAC90880.1| (AJ414151) putative integral membrane protein [Yersinia pestis]%2C gi|21959088|gb|AAM85802.1|AE013827_3 (AE013827) possible chaperone [Yersinia pestis KIM]%2C(len:154 aa) gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1911 YP_1912 YP1912 emrE2 emrE2 2131873 2132220 + putative integral membrane protein similar to Yersinia pestis CO92 YPO2069 and Yersinia pestis KIM y2241. Contains Small multidrug resistance protein (Interpro|IPR000390) gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1912 YP_1913 YP1913 tdcF2 tdcF2 2132352 2132696 - Putative translation initiation inhibitor similar to Yersinia pestis CO92 YPO2070 and Yersinia pestis KIM y2240. Contains YjgF-like protein (Interpro|IPR006056). Contains Endoribonuclease L-PSP (Interpro|IPR006175) gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1913 YP_1914 YP1914 dinG2 dinG2 2132827 2134221 + putative DEAD box family helicase Best Blastp hit %3D gi|16122310|ref|NP_405623.1| (NC_003143) putative DEAD box family helicase [Yersinia pestis]%2C gi|22126125|ref|NP_669548.1| (NC_004088) putative enzyme [Yersinia pestis KIM]%2C gi|15980082|emb|CAC90883.1| (AJ414151) putative DEAD box family helicase [Yersinia pestis]%2C gi|21959084|gb|AAM85799.1|AE013826_11 (AE013826) putative enzyme [Yersinia pestis KIM]%2C(len:634 aa). This CDS lacks codon 348 to 518 of the couterparts in CO92 and KIM. The effect is unknown. gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1914 YP_1915 YP1915 YP_1915 2134239 2134991 + Inactive homologs of metal-dependent proteases%2C putative molecular chaperones similar to Yersinia pestis CO92 YPO2072 and Yersinia pestis KIM y2238. Contains Glycoprotease (M22) metalloprotease (Interpro|IPR000905%2C (GO:0006508)%2C (GO:0008450)) gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1915 YP_1916 YP1916 slp slp 2135128 2135733 + putative outer membrane protein similar to Yersinia pestis KIM y2237. Contains Outer membrane lipoprotein Slp family (Interpro|IPR004658) gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1916 YP_1917 YP1917 fadD fadD 2136325 2138064 + long-chain-fatty-acid-CoA ligase similar to Yersinia pestis CO92 fadD and Yersinia pestis KIM fadD. Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)). Contains Basic helix-loop-helix dimerization domain bHLH (Interpro|IPR001092) gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1917 YP_1918 YP1918 rnd rnd 2138185 2139345 + ribonuclease D similar to Yersinia pestis CO92 rnd and Yersinia pestis KIM rnd. Contains HRDC domain (Interpro|IPR002121%2C (GO:0005622)). Contains 3'-5' exonuclease (Interpro|IPR002562%2C (GO:0008408)). Contains Ribonuclease D (Interpro|IPR006292) gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1918 YP_1919 YP1919 minE minE 2139582 2139851 - cell division topological specificity factor similar to Yersinia pestis CO92 minE and Yersinia pestis KIM minE. Contains Septum formation topological specificity factor MinE (Interpro|IPR005527%2C (GO:0016288)) gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1919 YP_1920 YP1920 minD minD 2139855 2140667 - septum site-determining protein similar to Yersinia pestis CO92 minD and Yersinia pestis KIM minD. Contains ATPase%2C ParA type (Interpro|IPR000707). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1920 YP_1921 YP1921 minC minC 2140692 2141378 - cell division inhibitor similar to Yersinia pestis CO92 minC and Yersinia pestis KIM minC. Contains Septum formation inhibitor MinC (Interpro|IPR005526%2C (GO:0016288)) gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1921 YP_1923 YP1923 YP_1923 2142095 2142367 + hypothetical protein similar to Yersinia pestis CO92 YPO2080 and Yersinia pestis KIM y2231 gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1923 YP_1924 YP1924 mltB1 mltB1 2142508 2143593 + putative lipoprotein similar to Yersinia pestis CO92 YPO2081 and similar to Yersinia pestis KIM y2230 (residues 1 to 361 of 361 are similar to residues 2 to 362 of 362 from Yersinia pestis KIM y2230) gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1924 YP_1925 YP1925 mhpD3 mhpD3 2143778 2144320 + putative fumarylacetoacetate hydrolase family protein similar to Yersinia pestis CO92 YPO2082. Contains Fumarylacetoacetate (FAA) hydrolase (Interpro|IPR002529%2C (GO:0008152)) gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1925 YP_1926 YP1926 YP_1926 2144423 2144869 + hypothetical protein similar to Yersinia pestis CO92 YPO2083 and Yersinia pestis KIM y2228 gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1926 YP_1927 YP1927 int3 int3 2144899 2148144 - similar to Escherichia coli O157:H7 integrase Int TR:Q9EY96 (EMBL:AP000400) (428 aa) and to Escherichia coli putative lambdoid prophage RAC integrase IntR SW:INTR_ECOLI (P76056) (411 aa)%3B disrupted by IS100 pseudogene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1927 YP_1928 YP1928 YP_1928 2146204 2147226 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1928 YP_1929 YP1929 dnaC_16 dnaC_16 2147223 2148005 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1929 YP_1930 YP1930 YP_1930 2148173 2148433 - putative phage excisionase similar to Yersinia pestis CO92 YPO2087 gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1930 YP_1932 YP1932 YP_1932 2148733 2149431 - putative methyltransferase similar to Yersinia pestis CO92 YPO2088 and Yersinia pestis KIM y2224. gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1932 YP_1933 YP1933 YP_1933 2149458 2149904 + putative phage nin-region protein similar to Yersinia pestis KIM y2223 gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1933 YP_1934 YP1934 YP_1934 2149978 2150583 + putative phage protein similar to Yersinia pestis CO92 YPO2090 and Yersinia pestis KIM y2222 gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1934 YP_1935 YP1935 YP_1935 2150584 2150973 + putative phage antitermination protein similar to Yersinia pestis CO92 YPO2091 and Yersinia pestis KIM y2220. Contains Beta tubulin (Interpro|IPR002453%2C (GO:0007018)) gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1935 YP_1937 YP1937 YP_1937 2151244 2151807 + putative phage protein similar to Yersinia pestis CO92 YPO2093 and Yersinia pestis KIM y2218 gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1937 YP_1938 YP1938 YP_1938 2151892 2152074 - putative phage protein similar to Yersinia pestis CO92 YPO2094. gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1938 YP_1939 YP1939 YP_1939 2152411 2153619 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1939 YP_1940 YP1940 proP21 proP21 2153924 2155096 - conserved hypothetical phage protein similar to Yersinia pestis CO92 YPO2137 and Yersinia pestis KIM y2183 gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1940 YP_1941 YP1941 nifS nifS 2155100 2156299 - putative aminotransferase similar to Yersinia pestis CO92 YPO2138 and Yersinia pestis KIM y2182. Contains Aminotransferase%2C class V (Interpro|IPR000192%2C (GO:0008152)%2C (GO:0008483)). Contains Aminotransferase%2C class V (Interpro|IPR000192%2C (GO:0008152)%2C (GO:0008483)) gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1941 YP_1942 YP1942 YP_1942 2156316 2157101 - putative phage protein similar to Yersinia pestis CO92 YPO2139 and Yersinia pestis KIM y2181. gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1942 YP_1943 YP1943 YP_1943 2158148 2158504 + putative phage protein similar to Yersinia pestis CO92 YPO2140 and Yersinia pestis KIM y2180 gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1943 YP_1944 YP1944 dsbB dsbB 2158921 2159499 - disulfide bond formation protein B similar to Yersinia pestis CO92 dsbB and Yersinia pestis KIM dsbB. Contains Disulfide bond formation protein DsbB (Interpro|IPR003752%2C (GO:0006118)%2C (GO:0016020)) gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1944 YP_1945 YP1945 nhaB nhaB 2159687 2161261 - Na+/H+ antiporter similar to Yersinia pestis CO92 nhaB. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Na+/H+ antiporter NhaB (Interpro|IPR004671%2C (GO:0006814)%2C (GO:0016021)) gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1945 YP_1946 YP1946 fadR2 fadR2 2161505 2162224 + fatty acid metabolism regulatory protein similar to Yersinia pestis CO92 fadR and Yersinia pestis KIM fadR. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)) gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1946 YP_1947 YP1947 spoVR spoVR 2162442 2163977 - SpoVR family protein similar to Yersinia pestis CO92 YPO2145 and Yersinia pestis KIM y2175 gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1947 YP_1948 YP1948 dadA1 dadA1 2164442 2165746 + D-amino acid dehydrogenase small subunit similar to Yersinia pestis CO92 dadA and Yersinia pestis KIM dadA. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains NAD binding site (Interpro|IPR000205). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)). Contains FAD dependent oxidoreductase (Interpro|IPR006076%2C (GO:0006118)%2C (GO:0016491)) gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1948 YP_1949 YP1949 proP22 proP22 2165762 2166964 - putative multidrug resistance protein similar to Yersinia pestis CO92 YPO2148 and Yersinia pestis KIM y2173. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains Drug resistance transporter Bcr/CflA subfamily (Interpro|IPR004812%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1949 YP_1950 YP1950 YP_1950 2167229 2168098 - Pirin-related protein similar to Yersinia pestis CO92 YPO2149. Contains Protein of unknown function DUF209 (Interpro|IPR003829) gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1950 YP_1951 YP1951 lysR10 lysR10 2168269 2169201 + LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2150 and Yersinia pestis KIM y2171. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1951 YP_1952 YP1952 rhaT7 rhaT7 2169236 2170357 - putative membrane protein similar to Yersinia pestis CO92 YPO2151 and Yersinia pestis KIM y2170. Contains Protein of unknown function DUF6 (Interpro|IPR000620). Contains NADH-ubiquinone oxidoreductase%2C chain 4 (Interpro|IPR003918%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1952 YP_1953 YP1953 YP_1953 2170462 2171781 - hypothetical protein similar to Yersinia pestis CO92 YPO2152 and Yersinia pestis KIM y2169. Contains Protein of unknown function DUF444 (Interpro|IPR006698) gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1953 YP_1954 YP1954 prkA prkA 2171886 2173820 - Putative Ser protein kinase similar to Yersinia pestis CO92 YPO2153 and Yersinia pestis KIM y2168. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1954 YP_1955 YP1955 YP_1955 2174243 2175013 + putative exported protein similar to Yersinia pestis CO92 YPO2155 and Yersinia pestis KIM y2167. gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1955 YP_1956 YP1956 YP_1956 2175086 2175961 - putative enzymes related to aldose 1-epimerase similar to Yersinia pestis CO92 YPO2156 and Yersinia pestis KIM y2166. Contains Aldose 1-epimerase (Interpro|IPR001823%2C (GO:0006012)) gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1956 YP_1957 YP1957 gapA gapA 2176275 2177279 - glyceraldehyde 3-phosphate dehydrogenase A similar to Yersinia pestis CO92 gapA and Yersinia pestis KIM gapA. Contains Glyceraldehyde 3-phosphate dehydrogenase (Interpro|IPR000173%2C (GO:0006096)). Contains Glyceraldehyde-3-phosphate dehydrogenase%2C type I (Interpro|IPR006424) gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1957 YP_1958 YP1958 YP_1958 2177561 2178031 + Conserved domain frequently associated with peptide methionine sulfoxide reductase similar to Yersinia pestis CO92 YPO2158 and Yersinia pestis KIM y2164. Contains Protein of unknown function DUF25 (Interpro|IPR002579) gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1958 YP_1959 YP1959 YP_1959 2177997 2178374 + hypothetical protein similar to Yersinia pestis KIM y2163. gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1959 YP_1960 YP1960 pncA pncA 2178508 2179155 - putative pyrazinamidase/nicotinamidase similar to Yersinia pestis CO92 pncA and Yersinia pestis KIM y2162. Contains Isochorismatase hydrolase family (Interpro|IPR000868%2C (GO:0008152)) gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1960 YP_1961 YP1961 ansA ansA 2179170 2180186 - L-asparaginase I similar to Yersinia pestis CO92 ansA and Yersinia pestis KIM ansA. Contains L-asparaginase%2C type I (Interpro|IPR006033%2C (GO:0006520)). Contains Asparaginase/glutaminase (Interpro|IPR006034%2C (GO:0006520)) gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1961 YP_1962 YP1962 sppA sppA 2180303 2182153 - protease IV similar to Yersinia pestis CO92 sppA and Yersinia pestis KIM sppA. Contains Peptidase U7 (Interpro|IPR002142%2C (GO:0006508)). Contains Signal peptide peptidase%2C SppA 67 kDa type (Interpro|IPR004634%2C (GO:0016021)). Contains Signal peptide peptidase%2C SppA 36 kDa type (Interpro|IPR004635%2C (GO:0008233)) gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1962 YP_1963 YP1963 nfnB nfnB 2182316 2182867 + putative nitroreductase similar to Yersinia pestis CO92 YPO2163 and Yersinia pestis KIM y2159. Contains Nitroreductase family (Interpro|IPR000415%2C (GO:0006118)%2C (GO:0008246)) gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1963 YP_1964 YP1964 selD selD 2183092 2184138 + selenide%2C water dikinase similar to Yersinia pestis CO92 selD and Yersinia pestis KIM selD. Contains AIR synthase related protein (Interpro|IPR000728%2C (GO:0003824)). Contains Selenide water dikinase (Interpro|IPR004536%2C (GO:0005524)) gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1964 YP_1965 YP1965 topB topB 2184212 2186140 + DNA topoisomerase III similar to Yersinia pestis CO92 topB and Yersinia pestis KIM topB. Contains DNA topoisomerase I (Interpro|IPR000380%2C (GO:0006268)). Contains DNA topoisomerase I%2C ATP-binding (Interpro|IPR003601%2C (GO:0006268)). Contains DNA topoisomerase I%2C DNA-binding (Interpro|IPR003602%2C (GO:0006268)). Contains Bacterial DNA topoisomerase III (Interpro|IPR005738%2C (GO:0006268)). Contains Toprim sub-domain (Interpro|IPR006154%2C (GO:0006304)). Contains TOPRIM (Interpro|IPR006171%2C (GO:0006304)) gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1965 YP_1966 YP1966 YP_1966 2186137 2186427 + putative exported protein similar to Yersinia pestis CO92 YPO2166 and Yersinia pestis KIM y2155. gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1966 YP_1967 YP1967 nudG nudG 2186440 2186826 - putative pyrophosphohydrolase similar to Yersinia pestis CO92 nudG and Yersinia pestis KIM y2154. Contains NUDIX hydrolase (Interpro|IPR000086) gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1967 YP_1968 YP1968 xthA xthA 2186924 2187739 - exodeoxyribonuclease III similar to Yersinia pestis CO92 xthA and Yersinia pestis KIM xthA. Contains AP endonuclease%2C family 1 (Interpro|IPR000097%2C (GO:0006281)). Contains Exodeoxyribonuclease III xth (Interpro|IPR004808%2C (GO:0006281)). Contains Endonuclease/Exonuclease/phosphatase family (Interpro|IPR005135) gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1968 YP_1969 YP1969 lysR11 lysR11 2188540 2189400 + putative LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2169 and Yersinia pestis KIM y2152. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)) gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1969 YP_1970 YP1970 purU purU 2190141 2190989 - formyltetrahydrofolate deformylase similar to Yersinia pestis KIM purU. Contains Formyl transferase%2C N-terminal (Interpro|IPR002376%2C (GO:0009058)%2C (GO:0016742)). Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains Formyltetrahydrofolate deformylase (Interpro|IPR004810%2C (GO:0006189)%2C (GO:0008864)) gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1970 YP_1971 YP1971 YP_1971 2191073 2191537 - hypothetical protein similar to Yersinia pestis CO92 YPO2172 and Yersinia pestis KIM y2149. Contains SEC-C motif (Interpro|IPR004027) gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1971 YP_1972 YP1972 hnr hnr 2192871 2193887 + putative response regulator similar to Yersinia pestis CO92 YPO2173 and Yersinia pestis KIM hnr. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1972 YP_1973 YP1973 ugd ugd 2194167 2195540 + putative nucleotide sugar dehydrogenase similar to Yersinia pestis CO92 YPO2174 and Yersinia pestis KIM y2147. Contains NAD binding site (Interpro|IPR000205). Contains UDP-glucose/GDP-mannose dehydrogenase (Interpro|IPR001732%2C (GO:0006118)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1973 YP_1974 YP1974 hns hns 2195975 2196382 - DNA-binding protein HLP-II (HU%2C BH2%2C HD%2C NS) similar to Yersinia pestis KIM hns. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Histone-like nucleoid-structuring protein H-NS (Interpro|IPR001801%2C (GO:0006355)) gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1974 YP_1975 YP1975 tdk tdk 2197132 2197722 + thymidine kinase similar to Yersinia pestis CO92 tdk and Yersinia pestis KIM tdk. Contains Thymidine kinase (Interpro|IPR001267%2C (GO:0005524)) gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1975 YP_1976 YP1976 adhE adhE 2198473 2201148 - aldehyde-alcohol dehydrogenase similar to Yersinia pestis CO92 adhE. Contains Iron-containing alcohol dehydrogenase (Interpro|IPR001670%2C (GO:0016491)). Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1976 YP_1977 YP1977 YP_1977 2201362 2201571 + hypothetical protein similar to Yersinia pestis KIM y2024. gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1977 YP_1978 YP1978 marC1 marC1 2201955 2202599 + putative membrane protein similar to Yersinia pestis CO92 YPO2181 and Yersinia pestis KIM y2025. Contains Multiple antibiotic resistance (Mar)-related protein (Interpro|IPR002771). Contains Voltage-dependent potassium channel (Interpro|IPR003091%2C (GO:0008076)) gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1978 YP_1979 YP1979 oppA3 oppA3 2203437 2205074 + periplasmic oligopeptide-binding protein precursor similar to Yersinia pestis CO92 oppA and Yersinia pestis KIM oppA. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)) gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1979 YP_1980 YP1980 oppB oppB 2205161 2206081 + oligopeptide transport system permease protein similar to Yersinia pestis CO92 oppB and Yersinia pestis KIM oppB. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1980 YP_1981 YP1981 oppC oppC 2206100 2207005 + oligopeptide transport system permease protein similar to Yersinia pestis CO92 oppC and Yersinia pestis KIM oppC. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Prion protein (Interpro|IPR000817) gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1981 YP_1982 YP1982 oppD oppD 2207017 2208018 + oligopeptide transport ATP-binding protein similar to Yersinia pestis CO92 oppD and Yersinia pestis KIM oppD. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1982 YP_1983 YP1983 oppF2 oppF2 2208015 2209016 + oligopeptide transport ATP-binding protein similar to Yersinia pestis CO92 oppF and Yersinia pestis KIM oppF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1983 YP_1984 YP1984 YP_1984 2209577 2209792 + hypothetical protein similar to Yersinia pestis KIM y2031 gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1984 YP_1985 YP1985 YP_1985 2210091 2210465 - hypothetical protein similar to Yersinia pestis KIM y2032 gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1985 YP_1986 YP1986 cls cls 2210579 2212060 - cardiolipin synthetase similar to Yersinia pestis CO92 cls and Yersinia pestis KIM cls. Contains Phospholipase D/Transphosphatidylase (Interpro|IPR001736%2C (GO:0008152)) gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1986 YP_1988 YP1988 ail1 ail1 2213086 2213625 + attachment invasion locus protein precursor similar to Yersinia pestis CO92 ail and Yersinia pestis KIM ompX. Contains Virulence-related outer membrane protein (Interpro|IPR000758). Contains Virulence-related outer membrane protein (Interpro|IPR000758) gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1988 YP_1989 YP1989 YP_1989 2213846 2214109 + hypothetical protein similar to Yersinia pestis CO92 YPO2191 gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1989 YP_1990 YP1990 YP_1990 2214225 2214479 - hypothetical protein Best Blastp hit %3D gi|15792488|ref|NP_282311.1| (NC_002163) hypothetical protein Cj1164c [Campylobacter jejuni]%2C gi|11346721|pir||F81321 hypothetical protein Cj1164c [imported] - Campylobacter jejuni (strain NCTC 11168)%2C gi|6968597|emb|CAB73418.1| (AL139077) hypothetical protein Cj1164c [Campylobacter jejuni subsp. jejuni NCTC 11168]%2C(len:87 aa) gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1990 YP_1991 YP1991 YP_1991 2214693 2214989 - hypothetical protein similar to Yersinia pestis CO92 YPO2192 and Yersinia pestis KIM y2036. Contains YCII-related domain (Interpro|IPR005545) gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1991 YP_1992 YP1992 tonB tonB 2215290 2216048 + TonB protein similar to Yersinia pestis CO92 tonB and Yersinia pestis KIM tonB. Contains Glutelin (Interpro|IPR000480%2C (GO:0045735)). Contains Proline-rich region (Interpro|IPR000694). Contains Proline-rich extensin (Interpro|IPR002965). Contains Gram-negative bacterial tonB protein (Interpro|IPR003538%2C (GO:0030288)). Contains TonB%2C C-terminal (Interpro|IPR006260) gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1992 YP_1993 YP1993 YP_1993 2216084 2217292 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1993 YP_1994 YP1994 YP_1994 2217440 2217889 - putative acyl-CoA thioester hydrolase similar to Yersinia pestis CO92 YPO2195 and Yersinia pestis KIM y2039. Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824)) gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1994 YP_1995 YP1995 ispZ ispZ 2217969 2218511 - putative intracellular septation protein similar to Yersinia pestis CO92 ispZ and Yersinia pestis KIM y2040. Contains Intracellular septation protein A (Interpro|IPR006008%2C (GO:0016021)) gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1995 YP_1996 YP1996 YP_1996 2218742 2220476 + similar to gi|15600874|ref|NP_232504.1|(NC_002506) sulfate permease family protein [Vibrio cholerae](len:592 aa). There is a frameshift after codon 360. The sequence has been checked and is believed to be correct. Contains Sulphate transporter (Interpro|IPR001902%2C (GO:0016020)). Contains Sulfate transporter/antisigma-factor antagonist STAS (Interpro|IPR002645) pseudogene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1996 YP_1997 YP1997 YP_1997 2220597 2221367 - putative membrane protein similar to Yersinia pestis CO92 YPO2199 and Yersinia pestis KIM y2042. Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)) gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1997 YP_1998 YP1998 YP_1998 2221529 2221744 + hypothetical protein similar to Yersinia pestis CO92 YPO2200 and Yersinia pestis KIM y2043 gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1998 YP_1999 YP1999 ompW ompW 2221841 2222488 + putative exported protein similar to Yersinia pestis CO92 ompW and Yersinia pestis KIM y2044. Contains Virulence-related outer membrane protein (Interpro|IPR000758). Contains OmpW family (Interpro|IPR005618) gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=YP_1999 YP_2000 YP2000 osmY1 osmY1 2222635 2222949 - putative lipoprotein similar to Yersinia pestis CO92 YPO2202 and Yersinia pestis KIM y2045. Contains Transport-associated domain (Interpro|IPR007055) gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2000 YP_2001 YP2001 trpA trpA 2223292 2224098 - tryptophan synthase alpha chain similar to Yersinia pestis CO92 trpA. Contains Tryptophan synthase%2C alpha chain (Interpro|IPR002028%2C (GO:0006568)). Contains FMN/related compound-binding core (Interpro|IPR003009) gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2001 YP_2002 YP2002 trpB trpB 2224098 2225384 - tryptophan synthase beta chain similar to Yersinia pestis CO92 trpB and Yersinia pestis KIM trpB. Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)). Contains Tryptophan synthase%2C beta chain and related (Interpro|IPR006653%2C (GO:0006568)). Contains Tryptophan synthase%2C beta chain (Interpro|IPR006654%2C (GO:0006568)) gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2002 YP_2003 YP2003 trpC trpC 2225445 2226872 - tryptophan biosynthesis protein TrpCF similar to Yersinia pestis CO92 trpC and Yersinia pestis KIM trpC. Contains N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (Interpro|IPR001240%2C (GO:0006568)). Contains Indole-3-glycerol phosphate synthase (Interpro|IPR001468%2C (GO:0006568)) gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2003 YP_2004 YP2004 trpD1 trpD1 2226876 2227877 - anthranilate phosphoribosyltransferase similar to Yersinia pestis CO92 trpD. Contains Glycosyl transferase%2C family 3 (Interpro|IPR000312%2C (GO:0008152)%2C (GO:0016757)). Contains Anthranilate phosphoribosyl transferase (Interpro|IPR005940%2C (GO:0000162)%2C (GO:0004048)) gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2004 YP_2005 YP2005 trpG trpG 2227889 2228467 - anthranilate synthase component II similar to Yersinia pestis CO92 trpG. Contains Glutamine amidotransferase class-I (Interpro|IPR000991%2C (GO:0003824)). Contains Carbamoyl-phosphate synthase%2C GATase domain (Interpro|IPR001317). Contains Anthranilate synthase component II/delta crystallin (Interpro|IPR006220). Contains Glutamine amidotransferase of anthranilate synthase (Interpro|IPR006221) gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2005 YP_2006 YP2006 trpE2 trpE2 2228467 2230032 - anthranilate synthase component I similar to Yersinia pestis CO92 trpE and Yersinia pestis KIM. Contains Anthranilate synthase component I%2C proteobacterial type (Interpro|IPR005257). Contains Anthranilate synthase component I and chorismate binding protein (Interpro|IPR005801%2C (GO:0009058)). Contains Anthranilate synthase component I%2C N-terminal (Interpro|IPR006805) gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2006 YP_2008 YP2008 trpH trpH 2230484 2231383 + PHP domain similar to Yersinia pestis CO92 trpH. Contains Phosphoesterase PHP%2C N-terminal (Interpro|IPR003141%2C (GO:0006260)). Contains PHP domain C-terminal region (Interpro|IPR004013) gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2008 YP_2009 YP2009 sUA5B sUA5B 2231400 2232020 + Putative translation factor (SUA5) similar to Yersinia pestis CO92 YPO2212 and Yersinia pestis KIM y2053. Contains Sua5/YciO/YrdC/YwlC protein family (Interpro|IPR004388%2C (GO:0005554)). Contains SUA5/yciO/yrdC N-terminal (Interpro|IPR006070) gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2009 YP_2010 YP2010 rsuA3 rsuA3 2232350 2233384 + 16S rRNA uridine-516 pseudouridylate synthase-related pseudouridylate synthase similar to Yersinia pestis KIM y2054. Contains Pseudouridine synthase%2C Rsu (Interpro|IPR000748%2C (GO:0004730)). Contains RNA-binding S4 (Interpro|IPR002942%2C (GO:0003723)). Contains Pseudouridine synthase (Interpro|IPR006145) gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2010 YP_2011 YP2011 btuR btuR 2233507 2234097 - cob(I)alamin adenosyltransferase similar to Yersinia pestis CO92 btuR and Yersinia pestis KIM btuR. Contains RHO protein GDP dissociation inhibitor (Interpro|IPR000406%2C (GO:0005737)). Contains ATP:corrinoid adenosyltransferase BtuR/CobO/CobP (Interpro|IPR003724%2C (GO:0009236)) gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2011 YP_2012 YP2012 fabG9 fabG9 2234114 2234962 - putative short chain dehydrogenase similar to Yersinia pestis CO92 YPO2215 and Yersinia pestis KIM y2056. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2012 YP_2013 YP2013 sohB sohB 2235047 2236093 + peptidase family U7 protein similar to Yersinia pestis CO92 sohB and Yersinia pestis KIM sohB. Contains Peptidase U7 (Interpro|IPR002142%2C (GO:0006508)) gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2013 YP_2014 YP2014 YP_2014 2236212 2236463 - hypothetical protein similar to Yersinia pestis CO92 YPO2217 and Yersinia pestis KIM y2058 gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2014 YP_2015 YP2015 YP_2015 2236448 2236855 + hypothetical protein similar to Yersinia pestis CO92 YPO2217a and Yersinia pestis KIM y2059. gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2015 YP_2016 YP2016 topA2 topA2 2236882 2239497 + DNA topoisomerase I similar to Yersinia pestis CO92 topA and Yersinia pestis KIM topA. Contains DNA topoisomerase I (Interpro|IPR000380%2C (GO:0006268)). Contains DNA topoisomerase I%2C ATP-binding (Interpro|IPR003601%2C (GO:0006268)). Contains DNA topoisomerase I%2C DNA-binding (Interpro|IPR003602%2C (GO:0006268)). Contains Bacterial DNA topoisomerase I (Interpro|IPR005733%2C (GO:0006268)). Contains Toprim sub-domain (Interpro|IPR006154%2C (GO:0006304)). Contains TOPRIM (Interpro|IPR006171%2C (GO:0006304)) gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2016 YP_2017 YP2017 cysB cysB 2239894 2240868 + cys regulon transcriptional activator similar to Yersinia pestis CO92 cysB and Yersinia pestis KIM cysB. Contains Serine/threonine dehydratase%2C pyridoxal-phosphate attachment site (Interpro|IPR000634%2C (GO:0006520)). Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2017 YP_2018 YP2018 YP_2018 2241204 2242061 + hypothetical protein similar to Yersinia pestis CO92 YPO2220 and Yersinia pestis KIM y2062 gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2018 YP_2019 YP2019 acnA acnA 2242425 2245097 + aconitate hydratase 1 similar to Yersinia pestis CO92 acnA and Yersinia pestis KIM acnA. Contains Aconitate hydratase%2C C-terminal (Interpro|IPR000573%2C (GO:0008152)%2C (GO:0016836)). Contains Aconitate hydratase%2C N-terminal (Interpro|IPR001030). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Aconitate hydratase 1 (Interpro|IPR006249) gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2019 YP_2020 YP2020 ribA ribA 2245261 2245863 - GTP cyclohydrolase II similar to Yersinia pestis KIM ribA. Contains Regulator of chromosome condensation%2C RCC1 (Interpro|IPR000408). Contains GTP cyclohydrolase II (Interpro|IPR000926%2C (GO:0009231)) gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2020 YP_2022 YP2022 pgpB5 pgpB5 2246357 2247118 + phosphatidylglycerophosphatase B similar to Yersinia pestis CO92 pgpB and Yersinia pestis KIM pgpB. Contains PA-phosphatase related phosphoesterase (Interpro|IPR000326) gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2022 YP_2023 YP2023 YP_2023 2247275 2247598 + putative membrane protein similar to Yersinia pestis CO92 YPO2224 and Yersinia pestis KIM y2066. Contains Multicopper oxidase%2C type 1 (Interpro|IPR001117%2C (GO:0005507)) gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2023 YP_2024 YP2024 YP_2024 2247605 2248774 + putative N-acetylglucosaminyl transferase similar to Yersinia pestis CO92 YPO2225 and Yersinia pestis KIM y2067. Contains TPR repeat (Interpro|IPR001440) gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2024 YP_2025 YP2025 YP_2025 2248896 2249198 - hypothetical protein similar to Yersinia pestis CO92 YPO2226 and Yersinia pestis KIM y2068 gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2025 YP_2026 YP2026 pyrF pyrF 2249664 2250401 + orotidine 5'-phosphate decarboxylase similar to Yersinia pestis CO92 pyrF and Yersinia pestis KIM pyrF. Contains Orotidine 5'-phosphate decarboxylase (Interpro|IPR001754%2C (GO:0006207)) gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2026 YP_2027 YP2027 sUI1 sUI1 2250401 2250727 + translation initiation factor SUI1 familyprotein similar to Yersinia pestis CO92 YPO2228 and Yersinia pestis KIM y2070. Contains Translation initiation factor SUI1 (Interpro|IPR001950%2C (GO:0006413)). Contains Archaeal/bacterial translation initiation factor SUI1 (Interpro|IPR005872%2C (GO:0006412)) gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2027 YP_2029 YP2029 araD3 araD3 2251571 2252374 + L-ribulose-5-phosphate 4-epimerase similar to Yersinia pestis CO92 araD and Yersinia pestis KIM araD. Contains Class II aldolase/adducin%2C N-terminal (Interpro|IPR001303) gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2029 YP_2030 YP2030 YP_2030 2252403 2252651 - hypothetical protein similar to Yersinia pestis CO92 YPO2231 and Yersinia pestis KIM y2073 gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2030 YP_2031 YP2031 mipB mipB 2252853 2253650 + putative transaldolase similar to Yersinia pestis CO92 mipB and Yersinia pestis KIM mipB. Contains Transaldolase (Interpro|IPR001585%2C (GO:0005975)%2C (GO:0016228)). Contains Transaldolase C (Interpro|IPR004731%2C (GO:0005975)) gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2031 YP_2032 YP2032 YP_2032 2253767 2254096 - putative small protein similar to Yersinia pestis CO92 YPO2233 and Yersinia pestis KIM y2075. gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2032 YP_2033 YP2033 cstA1 cstA1 2254065 2256131 - carbon starvation protein similar to Yersinia pestis KIM cstA. Contains Carbon starvation protein CstA (Interpro|IPR003706%2C (GO:0016020)) gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2033 YP_2034 YP2034 rnb rnb 2256481 2258415 - exoribonuclease II similar to Yersinia pestis CO92 rnb and Yersinia pestis KIM rnb. Contains Ribonuclease II (Interpro|IPR001900%2C (GO:0004540)). Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)). Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains VacB and RNase II family 3'-5' exoribonuclease (Interpro|IPR004476%2C (GO:0016070)) gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2034 YP_2035 YP2035 proP23 proP23 2259084 2260394 + putative integral membrane protein similar to Yersinia pestis CO92 YPO2237 and Yersinia pestis KIM y2078. Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2035 YP_2036 YP2036 wcaG8 wcaG8 2260429 2261430 + Nucleoside-diphosphate-sugar epimerases similar to Yersinia pestis CO92 YPO2238 and Yersinia pestis KIM y2079. gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2036 YP_2037 YP2037 nth nth 2261613 2262254 - endonuclease III similar to Yersinia pestis CO92 nth and Yersinia pestis KIM nth. Contains Helix-hairpin-helix motif (Interpro|IPR000445%2C (GO:0003677)). Contains HhH-GPD (Interpro|IPR003265%2C (GO:0006284)). Contains Iron-sulfur cluster loop (Interpro|IPR003651%2C (GO:0005506)). Contains Endonuclease III%2C FCL (Interpro|IPR004035%2C (GO:0006281)). Contains Endonuclease III%2C HhH (Interpro|IPR004036%2C (GO:0006281)). Contains Endonuclease III/Nth (Interpro|IPR005759%2C (GO:0006284)) gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2037 YP_2038 YP2038 nqrD2 nqrD2 2262251 2262952 - putative membrane protein similar to Yersinia pestis CO92 YPO2240 and Yersinia pestis KIM y2081. Contains RnfA-Nqr electron transport subunit (Interpro|IPR003667%2C (GO:0016020)) gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2038 YP_2039 YP2039 nqrC2 nqrC2 2262949 2263578 - putative exported protein similar to Yersinia pestis CO92 YPO2241 and Yersinia pestis KIM y2082 gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2039 YP_2040 YP2040 nqrB2 nqrB2 2263588 2264745 - putative integral membrane protein similar to Yersinia pestis CO92 YPO2242 and Yersinia pestis KIM y2083. Contains NQR2 and RnfD/E related proteins (Interpro|IPR004338%2C (GO:0016020)) gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2040 YP_2041 YP2041 araC4 araC4 2265171 2266076 + putative AraC-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2243 and Yersinia pestis KIM y2084. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2041 YP_2042 YP2042 nqrA2 nqrA2 2266181 2268160 - putative iron-sulfur binding NADH dehydrogenase similar to Yersinia pestis CO92 YPO2244 and Yersinia pestis KIM y2085. Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Respiratory-chain NADH dehydrogenase%2C 51 kDa subunit (Interpro|IPR001949%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2042 YP_2043 YP2043 YP_2043 2268210 2268776 - putative iron-sulfur protein similar to Yersinia pestis CO92 YPO2245 and Yersinia pestis KIM y2086. Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 3Fe-4S ferredoxin (Interpro|IPR001080%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)) gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2043 YP_2044 YP2044 nqrE3 nqrE3 2268776 2269420 - putative membrane protein similar to Yersinia pestis CO92 YPO2246 and Yersinia pestis KIM y2087. Contains RnfA-Nqr electron transport subunit (Interpro|IPR003667%2C (GO:0016020)) gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2044 YP_2045 YP2045 YP_2045 2269485 2269928 - putative membrane protein similar to Yersinia pestis CO92 YPO2247 and Yersinia pestis KIM y2088 gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2045 YP_2046 YP2046 YP_2046 2270403 2272461 + similar to Vibrio cholerae RtxB protein TR:Q9X4W4 (EMBL:AF119150) (702 aa) and to gi|15641459|ref|NP_231091.1| RTX toxin transporter [Vibrio cholerae] (720 aa). There is a frameshift and an internal deletion after codon 584. The sequence has been checked and is believed to be correct. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) pseudogene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2046 YP_2047 YP2047 YP_2047 2272486 2273847 + similar to gi|15641458|ref|NP_231090.1| (NC_002505) RTX toxin transporter [Vibrio cholerae]%2C(len:467 aa). There are frameshitf after codon 62 and codon 319 aa. The sequence has been checked and believd to be correct. Contains Gram-negative bacterial RTX secretion protein D (Interpro|IPR003997%2C (GO:0009306)%2C (GO:0016020)). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)). Contains Gram-negative bacterial RTX secretion protein D (Interpro|IPR003997%2C (GO:0009306)%2C (GO:0016020)). Contains HlyD secretion protein%2C C-terminal (Interpro|IPR006144%2C (GO:0016020)) pseudogene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2047 YP_2048 YP2048 sunT-2 sunT-2 2273849 2275987 + putative toxin transport protein similar to Yersinia pestis CO92 YPO2252 and Yersinia pestis KIM y2093. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Peptidase family C39%2C N-terminal leader (Interpro|IPR005074%2C (GO:0016021)). Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2048 YP_2049 YP2049 araA araA 2276177 2277679 - L-arabinose isomerase similar to Yersinia pestis CO92 araA and Yersinia pestis KIM araA. Contains L-arabinose isomerase (Interpro|IPR003762%2C (GO:0008152)%2C (GO:0008733)) gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2049 YP_2050 YP2050 araB1 araB1 2277763 2279466 - L-ribulokinase similar to Yersinia pestis CO92 araB and Yersinia pestis KIM araB. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains Heat shock protein Hsp70 (Interpro|IPR001023). Contains L-ribulokinase (Interpro|IPR005929%2C (GO:0019572)) gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2050 YP_2051 YP2051 araF araF 2279874 2280857 + L-arabinose-binding periplasmic protein precursor similar to Yersinia pestis CO92 araF and Yersinia pestis KIM araF. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2051 YP_2052 YP2052 araG araG 2280955 2282526 + L-arabinose transport ATP-binding protein similar to Yersinia pestis CO92 araG and Yersinia pestis KIM araG. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2052 YP_2053 YP2053 araH9 araH9 2282529 2283593 + L-arabinose transport system permease protein similar to Yersinia pestis CO92 araH and Yersinia pestis KIM araH. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2053 YP_2054 YP2054 YP_2054 2283795 2284635 + similar to Yersinia pestis CO92 araC and Yersinia pestis KIM araC. There is a frameshift mutation following codon 229. The sequence has been checked and is believed to be correct. pseudogene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2054 YP_2055 YP2055 mviM4 mviM4 2284763 2285812 + putative oxidoreductase similar to Yersinia pestis CO92 YPO2259 and Yersinia pestis KIM y2101. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)). Contains Oxidoreductase%2C C-terminal (Interpro|IPR004104%2C (GO:0008152)%2C (GO:0016491)) gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2055 YP_2056 YP2056 YP_2056 2286006 2287034 + putative membrane protein similar to Yersinia pestis CO92 YPO2260 and Yersinia pestis KIM y2102. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Protein prenyltransferase%2C alpha subunit (Interpro|IPR002088%2C (GO:0018346)) gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2056 YP_2058 YP2058 YP_2058 2287240 2287839 + hypothetical protein similar to Yersinia pestis CO92 YPO2261 and Yersinia pestis KIM y2103 gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2058 YP_2059 YP2059 YP_2059 2287888 2289432 - putative exported protein similar to Yersinia pestis CO92 YPO2262 and Yersinia pestis KIM y2104. gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2059 YP_2060 YP2060 manA manA 2289672 2290847 - mannose-6-phosphate isomerase similar to Yersinia pestis CO92 manA. Contains Mannose-6-phosphate isomerase%2C type I (Interpro|IPR001250%2C (GO:0008270)) gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2060 YP_2061 YP2061 fumC fumC 2291083 2292528 + fumarate hydratase%2C class II similar to Yersinia pestis CO92 fumC and Yersinia pestis KIM fumC. Contains Fumarate lyase (Interpro|IPR000362%2C (GO:0003824)). Contains Delta crystallin (Interpro|IPR003031). Contains Fumarate hydratase%2C class II (Interpro|IPR005677%2C (GO:0045239)) gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2061 YP_2062 YP2062 tus tus 2292608 2293582 - DNA-binding protein similar to Yersinia pestis KIM tus gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2062 YP_2063 YP2063 YP_2063 2293928 2294653 - len: 241 aa%3B Best Blastp hit %3D gi|22125997|ref|NP_669420.1| (NC_004088) putative transport protein [Yersinia pestis KIM]%2C gi|21958943|gb|AAM85671.1|AE013813_7 (AE013813) putative transport protein [Yersinia pestis KIM]%2C(len:372 aa)%3BThis CDS seems to have lose the N-terminal 149 aa of counterparts CDS in CO92 and KIM. pseudogene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2063 YP_2064 YP2064 mlc mlc 2294804 2296021 + putative ROK family transcriptional regulatory protein similar to Yersinia pestis CO92 mlc and Yersinia pestis KIM mlc. Contains ROK family (Interpro|IPR000600) gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2064 YP_2065 YP2065 bioD2 bioD2 2296221 2296913 + putative dethiobiotin synthetase similar to Yersinia pestis CO92 bioD and Yersinia pestis KIM y2111. Contains Cobyrinic acid a%2Cc-diamide synthase (Interpro|IPR002586%2C (GO:0009236)%2C (GO:0042242)). Contains Dethiobiotin synthase (Interpro|IPR004472%2C (GO:0009102)) gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2065 YP_2066 YP2066 eriC2 eriC2 2297073 2298368 - putative membrane protein similar to Yersinia pestis CO92 YPO2270 and Yersinia pestis KIM y2112. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Cl- channel%2C voltage gated (Interpro|IPR001807%2C (GO:0016020)) gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2066 YP_2067 YP2067 galR1 galR1 2298953 2299969 - putative LacI-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2283 and Yersinia pestis KIM galR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761). Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2067 YP_2068 YP2068 YP_2068 2300033 2300506 - hypothetical protein similar to Yersinia pestis CO92 YPO2284 and Yersinia pestis KIM y2114. gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2068 YP_2069 YP2069 YP_2069 2300647 2301033 - len: 128 aa%3B Best Blastp hit %3D gi|16122509|ref|NP_405822.1| (NC_003143) putative ribose-binding periplasmic protein (partial) [Yersinia pestis]%2C gi|15980281|emb|CAC91090.1| (AJ414151) putative ribose-binding periplasmic protein (partial) [Yersinia pestis]%2C(len:208 aa) pseudogene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2069 YP_2071 YP2071 tauA2 tauA2 2301436 2302467 + ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems%2C periplasmic components similar to Yersinia pestis CO92 YPO2286 and Yersinia pestis KIM y2116. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)) gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2071 YP_2072 YP2072 tauC2 tauC2 2302471 2303292 + putative transport system permease similar to Yersinia pestis CO92 YPO2287 and Yersinia pestis KIM y2117. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2072 YP_2073 YP2073 tauB2 tauB2 2303302 2304120 + taurine ATP-binding component of a transport system similar to Yersinia pestis KIM tauB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2073 YP_2074 YP2074 amn amn 2304545 2306053 - putative AMP nucleosidase similar to Yersinia pestis CO92 amn and Yersinia pestis KIM amn. Contains Purine and other phosphorylases%2C family 1 (Interpro|IPR000845%2C (GO:0009116)) gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2074 YP_2075 YP2075 YP_2075 2306241 2307674 + putative virulence factor similar to Yersinia pestis CO92 YPO2289 and Yersinia pestis KIM y2121. gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2075 YP_2076 YP2076 YP_2076 2307661 2310750 + putative virulence factor similar to Yersinia pestis CO92 YPO2290 and Yersinia pestis KIM y2122. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2076 YP_2077 YP2077 YP_2077 2310747 2313287 + putative virulence factor similar to Yersinia pestis CO92 YPO2291. Contains Myb DNA-binding domain (Interpro|IPR001005%2C (GO:0005634)) gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2077 YP_2078 YP2078 YP_2078 2313456 2314250 - hypothetical protein similar to Yersinia pestis KIM y2124 gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2078 YP_2079 YP2079 ilvB2 ilvB2 2314837 2316519 + putative acetolactate synthase large subunit similar to Yersinia pestis CO92 YPO2293 and Yersinia pestis KIM ilvB. Contains Pyruvate decarboxylase (Interpro|IPR000399). Contains Acetolactate synthase large subunit biosynthetic type (Interpro|IPR004407%2C (GO:0009082)) gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2079 YP_2080 YP2080 ilvN ilvN 2316506 2316868 + putative acetolactate synthase small subunit similar to Yersinia pestis CO92 ilvN and Yersinia pestis KIM ilvN. Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains Acetolactate synthase%2C small subunit (Interpro|IPR004789%2C (GO:0009082)) gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2080 YP_2081 YP2081 YP_2081 2316935 2317609 - haloacid dehalogenase-like hydrolase family protein similar to Yersinia pestis CO92 YPO2295 and Yersinia pestis KIM y2128. Contains Signal peptidase (Interpro|IPR000508%2C (GO:0006508)%2C (GO:0016020)). Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 (Interpro|IPR006439) gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2081 YP_2082 YP2082 YP_2082 2317740 2320136 - hypothetical protein similar to Yersinia pestis KIM y2129. gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2082 YP_2083 YP2083 phoA phoA 2320682 2322157 - alkaline phosphatase similar to Yersinia pestis KIM phoA. Contains Alkaline phosphatase (Interpro|IPR001952%2C (GO:0008152)%2C (GO:0016302)) gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2083 YP_2084 YP2084 ada2 ada2 2322482 2322886 + Methylated DNA-protein cysteine methyltransferase Best Blastp hit %3D gi|16122523|ref|NP_405836.1| (NC_003143) putative methylated-DNA--protein-cysteine methyltransferase [Yersinia pestis]%2C gi|22126019|ref|NP_669442.1| (NC_004088) O-6-alkylguanine-DNA/cysteine-protein methyltransferase [Yersinia pestis KIM]%2C gi|15980295|emb|CAC91104.1| (AJ414151) putative methylated-DNA--protein-cysteine methyltransferase [Yersinia pestis]%2C gi|21958968|gb|AAM85693.1|AE013816_3 (AE013816) O-6-alkylguanine-DNA/cysteine-protein methyltransferase [Yersinia pestis KIM]%2C(len:172 aa)%3B. Contains Methylated-DNA-[protein]-cysteine S-methyltransferase (Interpro|IPR001497%2C (GO:0006281)) gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2084 YP_2085 YP2085 fnr fnr 2322959 2323711 + fumarate and nitrate reduction regulatory protein similar to Yersinia pestis CO92 fnr and Yersinia pestis KIM fnr. Contains Cyclic nucleotide-binding domain (Interpro|IPR000595). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)) gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2085 YP_2086 YP2086 uspA1 uspA1 2323866 2324804 + putative stress protein similar to Yersinia pestis CO92 YPO2301 and Yersinia pestis KIM y2133. Contains Universal stress protein (Usp) (Interpro|IPR006015). Contains Usp domain (Interpro|IPR006016) gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2086 YP_2087 YP2087 pntB pntB 2325079 2326473 - NAD(P) transhydrogenase subunit beta similar to Yersinia pestis CO92 pntB and Yersinia pestis KIM pntB. Contains NAD(P) transhydrogenase%2C beta subunit (Interpro|IPR004003%2C (GO:0006118)%2C (GO:0008746)) gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2087 YP_2088 YP2088 pntA pntA 2326546 2328072 - NAD(P) transhydrogenase alpha subunit similar to Yersinia pestis CO92 pntA and Yersinia pestis KIM pntA. Contains Alanine dehydrogenase and pyridine nucleotide transhydrogenase (Interpro|IPR004002%2C (GO:0006118)%2C (GO:0016491)). Contains NAD(P) transhydrogenase%2C alpha subunit (Interpro|IPR004571%2C (GO:0015992)) gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2088 YP_2089 YP2089 YP_2089 2328193 2328396 - hypothetical protein similar to Yersinia pestis CO92 YPO2304. gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2089 YP_2090 YP2090 YP_2090 2328602 2329555 + putative exported protein similar to Yersinia pestis CO92 YPO2305 and Yersinia pestis KIM y2136 gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2090 YP_2091 YP2091 potE3 potE3 2329825 2331216 + putative amino acid antiporter similar to Yersinia pestis CO92 YPO2306 and Yersinia pestis KIM y2137. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)). Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Arginine/ornithine antiporter (Interpro|IPR004754%2C (GO:0016021)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2091 YP_2092 YP2092 YP_2092 2331240 2331656 - hypothetical protein similar to Yersinia pestis CO92 YPO2307 and Yersinia pestis KIM y2138 gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2092 YP_2093 YP2093 rstA rstA 2331899 2332699 + two-component regulatory system%2C response regulator protein similar to Yersinia pestis CO92 rstA and Yersinia pestis KIM rstA. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2093 YP_2094 YP2094 YP_2094 2332727 2335964 + similar to Yersinia pestis CO92 YPO2309 and Yersinia pestis KIM y2140%3B disrupted by the insertion of IS100 element%2C insertion occurred near the C-terminus. It is not clear whether this insertion affects the function of the protein. pseudogene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2094 YP_2095 YP2095 YP_2095 2333612 2334634 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2095 YP_2096 YP2096 dnaC_17 dnaC_17 2334634 2335413 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2096 YP_2097 YP2097 YP_2097 2336058 2337557 + putative carboxypeptidase similar to Yersinia pestis CO92 YPO2310 and Yersinia pestis KIM y2141. Contains Carboxypeptidase Taq (M32) metallopeptidase (Interpro|IPR001333%2C (GO:0006508)) gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2097 YP_2098 YP2098 tnp_20 tnp_20 2337679 2338188 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2098 YP_2099 YP2099 rhsA1 rhsA1 2339106 2341730 + putative insecticidal toxin complex similar to Yersinia pestis CO92 YPO2312 and Yersinia pestis KIM y2020. Contains Anthrax toxin LF subunit (Interpro|IPR005165). Contains YD repeat (Interpro|IPR006530) gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2099 YP_2100 YP2100 gyrB1 gyrB1 2341733 2342089 + DNA gyrase (topoisomerase II) B subunit similar to Yersinia pestis CO92 YPO2313 and Yersinia pestis KIM y2019. gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2100 YP_2101 YP2101 YP_2101 2342193 2342351 - len: 52 aa%3B Best Blastp hit %3D gi|16122538|ref|NP_405851.1| (NC_003143) putative invertase protein (partial) [Yersinia pestis]%2C gi|15980311|emb|CAC91119.1| (AJ414152) putative invertase protein (partial) [Yersinia pestis]%2C(len:69 aa) pseudogene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2101 YP_2102 YP2102 YP_2102 2342916 2343494 - putative exported protein similar to Yersinia pestis CO92 YPO2315 gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2102 YP_2103 YP2103 cybB2 cybB2 2343520 2344074 - putative membrane protein similar to Yersinia pestis CO92 YPO2316. Contains Nickel-dependent hydrogenase b-type cytochrome subunit (Interpro|IPR000516%2C (GO:0016020)%2C (GO:0016491)) gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2103 YP_2105 YP2105 asr1 asr1 2344678 2344974 + putative acid shock protein similar to Yersinia pestis CO92 asr and Yersinia pestis KIM asr. Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains Pollen allergen Poa pIX/Phl pVI%2C C-terminal (Interpro|IPR001778) gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2105 YP_2106 YP2106 YP_2106 2345308 2346144 + putative pepeptidase similar to Yersinia pestis CO92 YPO2319 and Yersinia pestis KIM y2013. Contains Serine proteases%2C V8 family (Interpro|IPR000126%2C (GO:0006508)%2C (GO:0008236)). Contains Serine protease%2C trypsin family (Interpro|IPR001254%2C (GO:0006508)). Contains Chymotrypsin serine protease%2C family S1 (Interpro|IPR001314%2C (GO:0006508)) gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2106 YP_2107 YP2107 hipB2 hipB2 2346200 2346523 - putative DNA-binding phage-related protein similar to Yersinia pestis CO92 YPO2320 and Yersinia pestis KIM y2012. Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)) gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2107 YP_2108 YP2108 YP_2108 2346520 2346891 - putative phage protein similar to Yersinia pestis CO92 YPO2321. gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2108 YP_2109 YP2109 hrpA hrpA 2347188 2351075 - ATP-dependent helicase similar to Yersinia pestis CO92 hrpA and Yersinia pestis KIM hrpA. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2109 YP_2110 YP2110 acpD acpD 2351476 2352081 + acyl carrier protein phosphodiesterase similar to Yersinia pestis CO92 acpD and Yersinia pestis KIM acpD. Contains NAD(P)H dehydrogenase (quinone) (Interpro|IPR003680%2C (GO:0006118)) gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2110 YP_2111 YP2111 deoR2 deoR2 2352202 2353158 - putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2324 and Yersinia pestis KIM y2009. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)) gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2111 YP_2112 YP2112 dalD dalD 2353368 2354759 + putative mannitol dehydrogenase similar to Yersinia pestis CO92 dalD. Contains Mannitol dehydrogenase (Interpro|IPR000669%2C (GO:0008152)) gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2112 YP_2113 YP2113 YP_2113 2354978 2355349 - putative exported protein similar to Yersinia pestis CO92 YPO2326 and Yersinia pestis KIM y2007 gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2113 YP_2114 YP2114 YP_2114 2355550 2358246 - putative membrane protein similar to Yersinia pestis CO92 YPO2328 and Yersinia pestis KIM y2005. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2114 YP_2115 YP2115 ldhA1 ldhA1 2358512 2359504 + D-lactate dehydrogenase similar to Yersinia pestis CO92 ldhA and Yersinia pestis KIM ldhA. Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain (Interpro|IPR006139%2C (GO:0006564)%2C (GO:0016616)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain (Interpro|IPR006140%2C (GO:0006564)%2C (GO:0016616)) gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2115 YP_2116 YP2116 hslJ hslJ 2359574 2360026 + putative heat shock protein similar to Yersinia pestis CO92 hslJ and Yersinia pestis KIM hslJ. Contains Protein of unknown function DUF306 (Interpro|IPR005184) gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2116 YP_2117 YP2117 hlx hlx 2360084 2360497 - putative lipoprotein similar to Yersinia pestis CO92 YPO2331 and Yersinia pestis KIM y2002. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230) gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2117 YP_2118 YP2118 sapB sapB 2360710 2361369 + putative membrane protein similar to Yersinia pestis CO92 YPO2332 and Yersinia pestis KIM y2001. Contains MgtC/SapB transporter (Interpro|IPR003416) gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2118 YP_2119 YP2119 qacE qacE 2361429 2361767 - quaternary ammonium compound-resistance protein similar to Yersinia pestis CO92 qacE and Yersinia pestis KIM emrE. Contains Small multidrug resistance protein (Interpro|IPR000390) gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2119 YP_2120 YP2120 nifJ nifJ 2362240 2365773 + putative pyruvate-flavodoxin oxidoreductase similar to Yersinia pestis CO92 nifJ and Yersinia pestis KIM y1999. Contains Hemopexin repeat (Interpro|IPR000585). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Pyruvate ferredoxin/flavodoxin oxidoreductase (Interpro|IPR002869%2C (GO:0006118)%2C (GO:0016491)). Contains Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal (Interpro|IPR002880%2C (GO:0006118)%2C (GO:0016491)) gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2120 YP_2121 YP2121 mesJ1 mesJ1 2366048 2366989 + putative ATPase of the PP-loop superfamily implicated in cell cycle control similar to Yersinia pestis CO92 YPO2335 and Yersinia pestis KIM y1998 gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2121 YP_2122 YP2122 aes2 aes2 2367329 2368264 + putative exported protein similar to Yersinia pestis CO92 YPO2336 and Yersinia pestis KIM y1996. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2122 YP_2123 YP2123 soxR2 soxR2 2368576 2369415 + putative regulatory protein similar to Yersinia pestis CO92 YPO2337 and Yersinia pestis KIM y1995. Contains Bacterial regulatory protein%2C MerR family (Interpro|IPR000551%2C (GO:0006355)) gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2123 YP_2125 YP2125 corA1 corA1 2369789 2370802 - Mg2+ and Co2+ transporters similar to Yersinia pestis KIM y1994. Contains Mg2+ transporter protein%2C CorA-like (Interpro|IPR002523%2C (GO:0016020)) gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2125 YP_2126 YP2126 mppA mppA 2371015 2372631 - putative periplasmic murein peptide-binding protein similar to Yersinia pestis CO92 mppA and Yersinia pestis KIM y1993. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)) gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2126 YP_2127 YP2127 YP_2127 2373009 2373779 + putative carboxypeptidase similar to Yersinia pestis CO92 YPO2340 and Yersinia pestis KIM y1992. Contains Zinc carboxypeptidase A metalloprotease (M14) (Interpro|IPR000834%2C (GO:0006508)) gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2127 YP_2128 YP2128 dgoA2 dgoA2 2373821 2374795 - putative mandelate racemase / muconate lactonizing protein similar to Yersinia pestis CO92 YPO2341 and Yersinia pestis KIM y1991. Contains Mandelate racemase/muconate lactonizing enzyme (Interpro|IPR001354%2C (GO:0008152)) gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2128 YP_2129 YP2129 tpx tpx 2374886 2375461 + thiol peroxidase similar to Yersinia pestis CO92 tpx and Yersinia pestis KIM tpx. Contains Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (Interpro|IPR000866). Contains Antioxidant Tpx (Interpro|IPR002065%2C (GO:0006804)%2C (GO:0009031)) gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2129 YP_2130 YP2130 tnp_21 tnp_21 2375663 2376172 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2130 YP_2131 YP2131 tyrR tyrR 2376319 2377896 - transcriptional regulatory protein similar to Yersinia pestis CO92 tyrR and Yersinia pestis KIM tyrR. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains CbxX/CfqX superfamily (Interpro|IPR000641%2C (GO:0005524)). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains Sigma-54 factor interaction domain (Interpro|IPR002078%2C (GO:0000160)%2C (GO:0003677)%2C (GO:0006355)). Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2131 YP_2132 YP2132 YP_2132 2378232 2378678 + hypothetical protein similar to Yersinia pestis CO92 YPO2345 and Yersinia pestis KIM y1987 gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2132 YP_2133 YP2133 YP_2133 2378740 2379198 + hypothetical protein similar to Yersinia pestis CO92 YPO2346 gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2133 YP_2134 YP2134 YP_2134 2379208 2380269 - putative membrane protein similar to Yersinia pestis CO92 YPO2347 and Yersinia pestis KIM y1985. Contains Conserved hypothetical protein 1620 (Interpro|IPR006507) gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2134 YP_2135 YP2135 YP_2135 2380266 2381663 - putative ATPase similar to Yersinia pestis CO92 YPO2348 and Yersinia pestis KIM y1984. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2135 YP_2136 YP2136 pspD pspD 2381644 2381886 - phage shock protein similar to Yersinia pestis KIM pspD gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2136 YP_2137 YP2137 pspC pspC 2381971 2382330 - phage shock protein C similar to Yersinia pestis CO92 pspC and Yersinia pestis KIM pspC gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2137 YP_2138 YP2138 pspB pspB 2382330 2382557 - phage shock protein B similar to Yersinia pestis CO92 pspB and Yersinia pestis KIM pspB gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2138 YP_2139 YP2139 pspA pspA 2382719 2383384 - phage shock protein A similar to Yersinia pestis CO92 pspA and Yersinia pestis KIM pspA. Contains Tropomyosin (Interpro|IPR000533) gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2139 YP_2140 YP2140 pspF pspF 2383614 2384657 + psp operon transcriptional activator similar to Yersinia pestis CO92 pspF and Yersinia pestis KIM pspF. Contains CbxX/CfqX superfamily (Interpro|IPR000641%2C (GO:0005524)). Contains Sigma-54 factor interaction domain (Interpro|IPR002078%2C (GO:0000160)%2C (GO:0003677)%2C (GO:0006355)). Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2140 YP_2141 YP2141 tnp_22 tnp_22 2384822 2385280 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2141 YP_2142 YP2142 YP_2142 2385424 2385561 + len: 86 aa%3B Best Blastp hit %3D gi|22125045|ref|NP_668468.1| (NC_004088) putative penicillin-binding protein [Yersinia pestis KIM]%2C gi|21957895|gb|AAM84719.1|AE013717_1 (AE013717) putative penicillin-binding protein [Yersinia pestis KIM]%2C(len:845 aa)%3Bthis CDS has been disrupted by IS1541 element. pseudogene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2142 YP_2144 YP2144 sapA sapA 2385945 2387591 + peptide transport periplasmic protein precursor similar to Yersinia pestis CO92 sapA and Yersinia pestis KIM sapA. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)). Contains Homeobox (Interpro|IPR001356%2C (GO:0006355)) gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2144 YP_2145 YP2145 sapB2 sapB2 2387588 2388553 + peptide transport system permease protein similar to Yersinia pestis CO92 sapB and Yersinia pestis KIM sapB. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2145 YP_2146 YP2146 sapC sapC 2388540 2389430 + peptide transport system permease protein similar to Yersinia pestis CO92 sapC and Yersinia pestis KIM sapC. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Delayed-early response protein/equilibrative nucleoside transporter (Interpro|IPR002259%2C (GO:0016020)) gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2146 YP_2147 YP2147 sapD sapD 2389430 2390422 + peptide transport system ATP-binding protein similar to Yersinia pestis CO92 sapD and Yersinia pestis KIM sapD. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2147 YP_2148 YP2148 sapF sapF 2390422 2391237 + peptide transport system ATP-binding protein similar to Yersinia pestis CO92 sapF and Yersinia pestis KIM sapF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2148 YP_2149 YP2149 YP_2149 2391627 2392907 + hypothetical protein similar to Yersinia pestis CO92 YPO2360 and Yersinia pestis KIM y1972 gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2149 YP_2150 YP2150 pTR2 pTR2 2393502 2395055 + putative proton dependent peptide transporter similar to Yersinia pestis CO92 YPO2361 and Yersinia pestis KIM y1971. Contains TGF-beta receptor%2C type I/II extracellular region (Interpro|IPR000109%2C (GO:0016020)). Contains Amino acid/peptide transporter (Interpro|IPR005279) gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2150 YP_2151 YP2151 YP_2151 2395310 2395900 + putative membrane protein similar to Yersinia pestis CO92 YPO2362 and Yersinia pestis KIM y1970 gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2151 YP_2152 YP2152 YP_2152 2396146 2396409 + hypothetical protein similar to Yersinia pestis CO92 YPO2363 and Yersinia pestis KIM y1969 gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2152 YP_2153 YP2153 gst2 gst2 2396651 2397259 + glutathione S-transferase similar to Yersinia pestis CO92 gst and Yersinia pestis KIM gst. Contains Glutathione S-transferase%2C N-terminal (Interpro|IPR004045). Contains Glutathione S-transferase%2C C-terminal (Interpro|IPR004046) gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2153 YP_2154 YP2154 pdxY pdxY 2397319 2398179 - pyridoxamine kinase similar to Yersinia pestis CO92 pdxY and Yersinia pestis KIM pdxY. Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173). Contains Pyridoxal kinase (Interpro|IPR004625%2C (GO:0008478)) gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2154 YP_2155 YP2155 tyrS tyrS 2398334 2399620 - tyrosine tRNA synthetase similar to Yersinia pestis KIM tyrS. Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Aminoacyl-tRNA synthetase%2C class Ib (Interpro|IPR002305%2C (GO:0006418)). Contains Tyrosyl-tRNA synthetase%2C class Ib (Interpro|IPR002307%2C (GO:0006437)). Contains RNA-binding S4 (Interpro|IPR002942%2C (GO:0003723)) gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2155 YP_2156 YP2156 pdxH pdxH 2399790 2400443 - pyridoxamine 5'-phosphate oxidase similar to Yersinia pestis CO92 pdxH and Yersinia pestis KIM pdxH. Contains Pyridoxamine 5'-phosphate oxidase (Interpro|IPR000659%2C (GO:0008615)) gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2156 YP_2157 YP2157 YP_2157 2400534 2400785 - hypothetical protein Best Blastp hit %3D gi|22125856|ref|NP_669279.1| (NC_004088) hypothetical protein [Yersinia pestis KIM]%2C gi|21958788|gb|AAM85530.1|AE013799_5 (AE013799) hypothetical protein [Yersinia pestis KIM]%2C(len:105 aa) gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2157 YP_2158 YP2158 YP_2158 2400906 2402060 - hypothetical protein similar to Yersinia pestis CO92 YPO2372 and Yersinia pestis KIM y1963. Contains Protein of unknown function UPF0075 (Interpro|IPR005338%2C (GO:0005554)) gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2158 YP_2159 YP2159 slyB slyB 2402574 2403041 + putative lipoprotein similar to Yersinia pestis CO92 slyB and Yersinia pestis KIM slyB gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2159 YP_2160 YP2160 slyA slyA 2403185 2403616 - MarR-family transcriptional regulatory protein similar to Yersinia pestis CO92 slyA and Yersinia pestis KIM slyA. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C MarR family (Interpro|IPR000835%2C (GO:0006355)) gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2160 YP_2161 YP2161 aRA12 aRA12 2404414 2405310 - putative aldo/keto reductase similar to Yersinia pestis CO92 YPO2375. Contains Aldo/keto reductase (Interpro|IPR001395) gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2161 YP_2162 YP2162 YP_2162 2405442 2405807 - putative Fe-S protein similar to Yersinia pestis CO92 YPO2376 gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2162 YP_2163 YP2163 YP_2163 2405855 2407492 + putative membrane protein similar to Yersinia pestis CO92 YPO2377. Contains Protein of unknown function DUF146 (Interpro|IPR003371) gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2163 YP_2164 YP2164 acrR4 acrR4 2407715 2408314 + TetR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2378 and Yersinia pestis KIM y1959. Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2164 YP_2165 YP2165 nemA2 nemA2 2408402 2409499 + NADH:flavin oxidoreductase / NADH oxidase familyprotein similar to Yersinia pestis CO92 YPO2379. Contains NADH:flavin oxidoreductase/NADH oxidase (Interpro|IPR001155%2C (GO:0006118)%2C (GO:0008246)) gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2165 YP_2166 YP2166 sepC sepC 2409720 2412674 - insecticial toxin similar to Yersinia pestis CO92 sepC. Contains YD repeat (Interpro|IPR006530) gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2166 YP_2167 YP2167 gloA1 gloA1 2412908 2413354 + lactoylglutathione lyase similar to Yersinia pestis CO92 gloA and Yersinia pestis KIM gloA. Contains Glyoxalase/Bleomycin resistance protein/dioxygenase domain (Interpro|IPR004360). Contains Glyoxalase I (Interpro|IPR004361%2C (GO:0005975)) gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2167 YP_2168 YP2168 rnt rnt 2413466 2414113 + ribonuclease T similar to Yersinia pestis CO92 rnt and Yersinia pestis KIM rnt. Contains Ribonuclease T (Interpro|IPR005987%2C (GO:0006396)). Contains Exonuclease (Interpro|IPR006055%2C (GO:0005622)) gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2168 YP_2169 YP2169 YP_2169 2414422 2414787 - Glutaredoxin-related proteins similar to Yersinia pestis CO92 YPO2383 and Yersinia pestis KIM y1953. Contains Glutaredoxin (Interpro|IPR002109%2C (GO:0006118)%2C (GO:0009491)). Contains Glutaredoxin-related protein (Interpro|IPR004480) gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2169 YP_2170 YP2170 YP_2170 2414872 2415093 - hypothetical protein similar to Yersinia pestis CO92 YPO2384 gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2170 YP_2171 YP2171 spr2 spr2 2415149 2416063 + putative exported protein similar to Yersinia pestis CO92 YPO2385 and Yersinia pestis KIM y1952. Contains NLP/P60 (Interpro|IPR000064). Contains Bipartite nuclear localization signal (Interpro|IPR001472) gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2171 YP_2172 YP2172 sodB sodB 2416441 2417019 + superoxide dismutase (Fe) similar to Yersinia pestis CO92 sodB and Yersinia pestis KIM sodB. Contains Manganese and iron superoxide dismutase (Interpro|IPR001189%2C (GO:0006801)) gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2172 YP_2173 YP2173 purR5 purR5 2417546 2418571 + purine nucleotide synthesis repressor similar to Yersinia pestis CO92 purR and Yersinia pestis KIM purR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2173 YP_2174 YP2174 lysR12 lysR12 2418660 2419592 - LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2388 and Yersinia pestis KIM y1949. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2174 YP_2175 YP2175 proP24 proP24 2419882 2421084 + putative drug resistance protein similar to Yersinia pestis CO92 YPO2389 and Yersinia pestis KIM y1948. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains SecY protein (Interpro|IPR002208%2C (GO:0009306)%2C (GO:0016020)). Contains Drug resistance transporter Bcr/CflA subfamily (Interpro|IPR004812%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2175 YP_2176 YP2176 cfa cfa 2421564 2422715 + cyclopropane-fatty-acyl-phospholipid synthase similar to Yersinia pestis CO92 cfa and Yersinia pestis KIM cfa. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)). Contains Cyclopropane-fatty-acyl-phospholipid synthase (Interpro|IPR003333%2C (GO:0008610)%2C (GO:0008825)) gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2176 YP_2177 YP2177 ribE ribE 2422766 2423422 - riboflavin synthase alpha chain similar to Yersinia pestis CO92 ribE and Yersinia pestis KIM ribE. Contains Lumazine-binding protein (Interpro|IPR001783%2C (GO:0008246)) gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2177 YP_2179 YP2179 norM2 norM2 2423671 2425044 + putative transport protein similar to Yersinia pestis CO92 YPO2392 and Yersinia pestis KIM y1945. Contains Multi antimicrobial extrusion (MatE) protein (Interpro|IPR002528) gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2179 YP_2180 YP2180 pykF pykF 2426071 2427483 + pyruvate kinase I similar to Yersinia pestis CO92 pykF and Yersinia pestis KIM pykF. Contains Pyruvate kinase (Interpro|IPR001697%2C (GO:0006096)) gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2180 YP_2181 YP2181 lpp lpp 2427795 2428040 + major outer membrane lipoprotein similar to Yersinia pestis CO92 lpp. Contains LPP motif (Interpro|IPR006817) gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2181 YP_2182 YP2182 tnp_23 tnp_23 2428180 2428689 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2182 YP_2183 YP2183 YP_2183 2429115 2432135 - similar to Yersinia pestis KIM y1940%3B disrupted by IS100 element pseudogene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2183 YP_2184 YP2184 YP_2184 2429271 2430293 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2184 YP_2185 YP2185 dnaC_18 dnaC_18 2430290 2431072 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2185 YP_2186 YP2186 YP_2186 2432406 2432969 - SufE protein similar to Yersinia pestis KIM y1939. Contains Protein of unknown function UPF0050 (Interpro|IPR003808)%3B probably involved in Fe-S center assembly gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2186 YP_2187 YP2187 csdB1 csdB1 2432917 2434149 - putative selenocysteine lyase similar to Yersinia pestis CO92 YPO2400 and Yersinia pestis KIM y1938. Contains Aminotransferase%2C class V (Interpro|IPR000192%2C (GO:0008152)%2C (GO:0008483)) gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2187 YP_2188 YP2188 YP_2188 2434134 2435459 - putative membrane components of an uncharacterized iron-regulated ABC-type transporter SufB similar to Yersinia pestis KIM y1937. Contains Protein of unknown function UPF0051 (Interpro|IPR000825%2C (GO:0005554)) gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2188 YP_2189 YP2189 YP_2189 2435434 2436207 - putative ATP-dependent transporter similar to Yersinia pestis CO92 YPO2402 and Yersinia pestis KIM y1936. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2189 YP_2190 YP2190 YP_2190 2436366 2437877 - putative membrane components of an uncharacterized iron-regulated ABC-type transporter SufB similar to Yersinia pestis CO92 YPO2403 and Yersinia pestis KIM y1935. Contains Protein of unknown function UPF0051 (Interpro|IPR000825%2C (GO:0005554)) gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2190 YP_2191 YP2191 iscA2 iscA2 2437892 2438290 - iron-sulfur cluster assembly scaffold protein similar to Yersinia pestis CO92 YPO2404 and Yersinia pestis KIM y1934. Contains Protein of unknown function%2C HesB/YadR/YfhF (Interpro|IPR000361%2C (GO:0005554)) gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2191 YP_2193 YP2193 paaI1 paaI1 2438879 2439295 - Uncharacterized protein similar to Yersinia pestis CO92 YPO2406 and Yersinia pestis KIM y1933. Contains Phenylacetic acid degradation-related protein (Interpro|IPR003736). Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824))%3B possibly involved in aromatic compounds catabolism gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2193 YP_2194 YP2194 glcD3 glcD3 2439417 2442473 - FAD/FMN-containing dehydrogenases similar to Yersinia pestis CO92 YPO2407 and Yersinia pestis KIM y1932. Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains FAD linked oxidase%2C C-terminal (Interpro|IPR004113%2C (GO:0008246)). Contains FAD linked oxidase%2C N-terminal (Interpro|IPR006094%2C (GO:0008246)) gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2194 YP_2195 YP2195 perM1 perM1 2443049 2444197 + putative membrane protein similar to Yersinia pestis CO92 YPO2408 and Yersinia pestis KIM y1931. Contains CD9/CD37/CD63 antigen (Interpro|IPR000301). Contains Polycystic kidney disease type 1 protein (Interpro|IPR000434). Contains Protein of unknown function UPF0118 (Interpro|IPR002549) gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2195 YP_2196 YP2196 ppsA ppsA 2444797 2447151 - phosphoenolpyruvate synthase similar to Yersinia pestis CO92 ppsA and Yersinia pestis KIM ppsA. Contains PEP-utilizing enzyme (Interpro|IPR000121%2C (GO:0016310)%2C (GO:0016772)). Contains Pyruvate phosphate dikinase%2C PEP/pyruvate-binding (Interpro|IPR002192%2C (GO:0016310)). Contains Phosphoenolpyruvate synthase (Interpro|IPR006319) gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2196 YP_2197 YP2197 YP_2197 2447518 2448339 + hypothetical protein similar to Yersinia pestis CO92 YPO2410 and Yersinia pestis KIM y1929. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Protein of unknown function DUF299 (Interpro|IPR005177) gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2197 YP_2198 YP2198 aroH aroH 2448496 2449542 + phospho-2-dehydro-3-deoxyheptonate aldolase similar to Yersinia pestis CO92 aroH and Yersinia pestis KIM aroH. Contains DAHP synthetase I/KDSA superfamily (Interpro|IPR006218%2C (GO:0009058)%2C (GO:0016228)). Contains Phospho-2-dehydro-3-deoxyheptonate aldolase%2C subtype 1 (Interpro|IPR006219%2C (GO:0009073)) gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2198 YP_2199 YP2199 YP_2199 2449711 2451186 - similar to gi|26247957|ref|NP_753997.1| Hypothetical protein ydiU [Escherichia coli CFT073](478 aa). There is a nonsense mutation (ochre) at position 245. The sequence has been checked and is believed to be correct. Contains Protein of unknown function UPF0061 (Interpro|IPR003846). pseudogene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2199 YP_2200 YP2200 lplA lplA 2451226 2452242 - putative lipoate-protein ligase A similar to Yersinia pestis CO92 lplA and Yersinia pestis KIM lplA. Contains Biotin/lipoate A/B protein ligase domain (Interpro|IPR004143%2C (GO:0006464)). Contains Lipoyltransferase and lipoate-protein ligase (Interpro|IPR004562) gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2200 YP_2201 YP2201 nlpC nlpC 2452367 2452798 - putative lipoprotein similar to Yersinia pestis CO92 nlpC and Yersinia pestis KIM nlpC. Contains NLP/P60 (Interpro|IPR000064). Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2201 YP_2202 YP2202 YP_2202 2452772 2452954 + hypothetical protein similar to Yersinia pestis KIM y1924 gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2202 YP_2203 YP2203 rhaT8 rhaT8 2453111 2453506 - putative membrane protein similar to Yersinia pestis CO92 YPO2416 and Yersinia pestis KIM y1923. gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2203 YP_2204 YP2204 rhaT9 rhaT9 2453494 2453838 - putative membrane protein similar to Yersinia pestis CO92 YPO2417. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2204 YP_2205 YP2205 YP_2205 2453835 2455499 - dolichyl-phosphate-mannose-protein mannosyltransferase-family protein similar to Yersinia pestis CO92 YPO2418 and Yersinia pestis KIM y1921. Contains Arsenical pump membrane protein (Interpro|IPR000802%2C (GO:0016021)). Contains Glycosyl transferase%2C family 39 (Interpro|IPR003342%2C (GO:0016020)) gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2205 YP_2206 YP2206 cDA12 cDA12 2455496 2456401 - putative xylanase/chitin deacetylase similar to Yersinia pestis CO92 YPO2419 and Yersinia pestis KIM y1920. Contains Polysaccharide deacetylase (Interpro|IPR002509%2C (GO:0005975)%2C (GO:0016810)) gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2206 YP_2207 YP2207 wcaG9 wcaG9 2456398 2458401 - putative formyl transferase similar to Yersinia pestis CO92 YPO2420 and Yersinia pestis KIM y1919. Contains Formyl transferase%2C N-terminal (Interpro|IPR002376%2C (GO:0009058)%2C (GO:0016742)). Contains Formyl transferase%2C C-terminal (Interpro|IPR005793%2C (GO:0009058)%2C (GO:0016742)) gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2207 YP_2208 YP2208 pmrF pmrF 2458398 2459381 - putative glycosyl transferase similar to Yersinia pestis CO92 pmrF and Yersinia pestis KIM y1918. Contains Glycosyl transferase%2C family 2 (Interpro|IPR001173) gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2208 YP_2209 YP2209 wecE wecE 2459368 2460522 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase similar to Yersinia pestis CO92 YPO2422 and Yersinia pestis KIM y1917. Contains DegT/DnrJ/EryC1/StrS aminotransferase (Interpro|IPR000653) gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2209 YP_2210 YP2210 btuD btuD 2460872 2461633 - putative vitamin B12 transport ATP-binding protein similar to Yersinia pestis CO92 btuD and Yersinia pestis KIM btuD. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2210 YP_2211 YP2211 btuE btuE 2461655 2462209 - putative vitamin B12 transport protein similar to Yersinia pestis CO92 btuE and Yersinia pestis KIM btuE. Contains Glutathione peroxidase (Interpro|IPR000889%2C (GO:0006804)) gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2211 YP_2212 YP2212 btuC2 btuC2 2462279 2463355 - vitamin B12 transport permease protein similar to Yersinia pestis KIM btuC. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)) gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2212 YP_2213 YP2213 YP_2213 2463513 2463971 - putative exported protein similar to Yersinia pestis CO92 YPO2426 and Yersinia pestis KIM y1913 gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2213 YP_2214 YP2214 ihfA ihfA 2464305 2464601 - integration host factor alpha-subunit similar to Yersinia pestis CO92 ihfA and Yersinia pestis KIM himA. Contains Histone-like bacterial DNA-binding protein (Interpro|IPR000119%2C (GO:0003677)). Contains Integration host factor%2C alpha subunit (Interpro|IPR005684%2C (GO:0006417)) gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2214 YP_2215 YP2215 pheT pheT 2464606 2466993 - phenylalanyl-tRNA synthetase beta chain similar to Yersinia pestis CO92 pheT and Yersinia pestis KIM pheT. Contains t-RNA-binding region (Interpro|IPR002547%2C (GO:0000049)). Contains Bacterial phenylalanyl-tRNA synthetase%2C beta subunit (Interpro|IPR004532%2C (GO:0006432)). Contains Ferredoxin-fold anticodon binding domain (Interpro|IPR005121). Contains B3/4 domain (Interpro|IPR005146). Contains tRNA synthetase B5 domain (Interpro|IPR005147) gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2215 YP_2216 YP2216 pheM pheM 2467007 2467990 - phenylalanyl-tRNA synthetase operon leader peptide similar to Yersinia pestis CO92 pheM and Yersinia pestis KIM pheS. Contains Phenylalanyl-tRNA synthetase%2C class IIc (Interpro|IPR002319%2C (GO:0006432)). Contains Aminoacyl tRNA synthetase%2C class II%2C N-terminal (Interpro|IPR004188%2C (GO:0006432)). Contains Phenylalanyl-tRNA synthetase%2C alpha subunit (Interpro|IPR004529%2C (GO:0006432)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2216 YP_2218 YP2218 rplT rplT 2468489 2468845 - 50S ribosomal protein L20 similar to Yersinia pestis CO92 rplT and Yersinia pestis KIM rplT. Contains Ribosomal protein L20%2C bacterial and organelle form (Interpro|IPR005812%2C (GO:0006412)). Contains Ribosomal protein L20 (Interpro|IPR005813%2C (GO:0006412)) gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2218 YP_2219 YP2219 rpmI rpmI 2468883 2469080 - 50S ribosomal protein L35 similar to Yersinia pestis CO92 rpmI. Contains Ribosomal protein L35 (Interpro|IPR001706%2C (GO:0006412)) gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2219 YP_2220 YP2220 infC infC 2469177 2469527 - protein chain initiation factor IF-3 similar to Yersinia pestis KIM infC. Contains Initiation factor 3 (Interpro|IPR001288%2C (GO:0006413)) gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2220 YP_2221 YP2221 thrS thrS 2469732 2471660 - threonyl-tRNA synthetase similar to Yersinia pestis CO92 thrS and Yersinia pestis KIM thrS. Contains tRNA synthetases%2C class-II (G%2C H%2C P and S) (Interpro|IPR002314%2C (GO:0006418)). Contains Threonyl-tRNA synthetase%2C class IIa (Interpro|IPR002320%2C (GO:0006435)). Contains TGS domain (Interpro|IPR004095). Contains Anticodon binding domain (Interpro|IPR004154%2C (GO:0006412)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2221 YP_2222 YP2222 YP_2222 2472051 2472263 + hypothetical protein similar to Yersinia pestis CO92 YPO2434 and Yersinia pestis KIM y1902. gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2222 YP_2224 YP2224 YP_2224 2473022 2473354 - hypothetical protein similar to Yersinia pestis KIM y1900 gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2224 YP_2225 YP2225 marC2 marC2 2473592 2474275 + multiple antibiotic resistance protein similar to Yersinia pestis CO92 marC and similar to Yersinia pestis KIM y1899 (residues 1 to 227 of 227 are similar to residues 11 to 237 of 237 from Yersinia pestis KIM y1899). Contains Multiple antibiotic resistance (Mar)-related protein (Interpro|IPR002771) gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2225 YP_2226 YP2226 mltE1 mltE1 2474397 2475059 - putative membrane-bound lytic mureintransglycosylase similar to Yersinia pestis CO92 YPO2438 and Yersinia pestis KIM mltE. Contains SLT domain (Interpro|IPR000189) gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2226 YP_2227 YP2227 yfeA yfeA 2475268 2476239 + periplasmic-binding protein similar to Yersinia pestis CO92 yfeA and Yersinia pestis KIM yfeA. Contains Periplasmic solute binding protein (Interpro|IPR006127%2C (GO:0030288)). Contains Adhesion lipoprotein (Interpro|IPR006128%2C (GO:0007155)). Contains Adhesin B (Interpro|IPR006129%2C (GO:0007155)) gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2227 YP_2228 YP2228 yfeB yfeB 2476236 2477126 + ATP-binding transport protein similar to Yersinia pestis CO92 yfeB and Yersinia pestis KIM yfeB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2228 YP_2229 YP2229 yfeC yfeC 2477126 2478010 + chelated iron transport system membrane protein similar to Yersinia pestis CO92 yfeC and Yersinia pestis KIM yfeC. Contains ABC transporter%2C family 3 (Interpro|IPR001626%2C (GO:0016020)) gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2229 YP_2230 YP2230 yfeD yfeD 2478007 2478900 + chelated iron transport system membrane protein similar to Yersinia pestis CO92 yfeD and Yersinia pestis KIM yfeD. Contains ABC transporter%2C family 3 (Interpro|IPR001626%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Preprotein translocase SecG subunit (Interpro|IPR004692%2C (GO:0009306)%2C (GO:0016021)) gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2230 YP_2231 YP2231 YP_2231 2479205 2480080 + hypothetical protein similar to Yersinia pestis CO92 YPO2444 and Yersinia pestis KIM y1892. Contains Fructosamine kinase (Interpro|IPR005581) gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2231 YP_2232 YP2232 yfeE yfeE 2480209 2480763 - putative yfeABCD locus regulator similar to Yersinia pestis CO92 yfeE and Yersinia pestis KIM yfeE gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2232 YP_2233 YP2233 YP_2233 2481174 2481839 + putative phosphatase similar to Yersinia pestis KIM y1890. Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402) gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2233 YP_2234 YP2234 YP_2234 2482090 2483298 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2234 YP_2235 YP2235 YP_2235 2483394 2483807 - hypothetical protein similar to Yersinia pestis CO92 YPO1620 and Yersinia pestis KIM y1780 gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2235 YP_2236 YP2236 YP_2236 2483815 2484384 - hypothetical protein similar to Yersinia pestis CO92 YPO1619 and Yersinia pestis KIM y1779 gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2236 YP_2237 YP2237 ndh ndh 2484922 2486226 - NADH dehydrogenase similar to Yersinia pestis CO92 YPO1617 and Yersinia pestis KIM ndh. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Aromatic-ring hydroxylase (Interpro|IPR003042%2C (GO:0008152)%2C (GO:0016491)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2237 YP_2238 YP2238 YP_2238 2486601 2487143 - putative esterase similar to Yersinia pestis CO92 YPO1616 and Yersinia pestis KIM y1776 gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2238 YP_2239 YP2239 bglX1 bglX1 2487271 2488308 - beta-hexosaminidase similar to Yersinia pestis CO92 YPO1615 and Yersinia pestis KIM y1775. Contains Glycoside hydrolase%2C family 3%2C N-terminal (Interpro|IPR001764%2C (GO:0005975)) gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2239 YP_2240 YP2240 cotS cotS 2488373 2489239 - putative choline kinase involved in LPS biosynthesis similar to Yersinia pestis CO92 YPO1614 and Yersinia pestis KIM y1773. gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2240 YP_2241 YP2241 flgN2 flgN2 2489220 2489795 - putative lipoprotein similar to Yersinia pestis CO92 YPO1613 and Yersinia pestis KIM y1772. Contains Glutelin (Interpro|IPR000480%2C (GO:0045735)). Contains Proline-rich region (Interpro|IPR000694). Contains Proline-rich extensin (Interpro|IPR002965) gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2241 YP_2242 YP2242 YP_2242 2489836 2490291 - putative lipoprotein similar to Yersinia pestis CO92 YPO1612 and Yersinia pestis KIM y1771. gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2242 YP_2243 YP2243 hit hit 2490260 2490613 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases similar to Yersinia pestis CO92 YPO1611 and Yersinia pestis KIM y1770. Contains Histidine triad (HIT) protein (Interpro|IPR001310) gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2243 YP_2244 YP2244 aroE2 aroE2 2490787 2491665 - putative shikimate dehydrogenase similar to Yersinia pestis CO92 YPO1610 and Yersinia pestis KIM y1769. Contains Shikimate/quinate 5-dehydrogenase (Interpro|IPR006151%2C (GO:0016089)) gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2244 YP_2245 YP2245 tnp_24 tnp_24 2492048 2492557 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2245 YP_2246 YP2246 ptsG ptsG 2492696 2494129 - PTS system%2C glucose-specific IIBC component similar to Yersinia pestis CO92 ptsG and Yersinia pestis KIM ptsG. Contains Phosphotransferase system PTS%2C EIIB domain (Interpro|IPR001996%2C (GO:0016020)). Contains Phosphotransferase system%2C EIIC (Interpro|IPR003352%2C (GO:0016020)). Contains PTS maltose and glucose-specific IIC component (Interpro|IPR004719%2C (GO:0016021)) gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2246 YP_2247 YP2247 tatD1 tatD1 2494435 2495244 - putative deoxyribonuclease similar to Yersinia pestis CO92 YPO1607 and Yersinia pestis KIM y1766. Contains TatD-related deoxyribonuclease (Interpro|IPR001130) gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2247 YP_2248 YP2248 holB holB 2495259 2496308 - DNA polymerase III%2C delta' subunit similar to Yersinia pestis CO92 holB and Yersinia pestis KIM holB. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Replication factor C conserved domain (Interpro|IPR000862%2C (GO:0006260)). Contains DNA polymerase III delta prime subunit (Interpro|IPR004622%2C (GO:0008408)) gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2248 YP_2249 YP2249 tmk tmk 2496281 2496919 - thymidylate kinase similar to Yersinia pestis CO92 tmk and Yersinia pestis KIM tmk. Contains Thymidylate kinase (Interpro|IPR000062%2C (GO:0006235)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2249 YP_2250 YP2250 YP_2250 2496909 2497934 - putative exported protein similar to Yersinia pestis CO92 YPO1604. Contains Protein of unknown function DUF175 (Interpro|IPR003770) gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2250 YP_2251 YP2251 pabC pabC 2498223 2499029 - 4-amino-4-deoxychorismate lyase similar to Yersinia pestis CO92 YPO1603 and Yersinia pestis KIM pabC. Contains Aminotransferase%2C class IV (Interpro|IPR001544%2C (GO:0008152)) gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2251 YP_2252 YP2252 tnp_25 tnp_25 2499445 2499954 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2252 YP_2253 YP2253 fabF4 fabF4 2500103 2501344 - 3-oxoacyl-[acyl-carrier-protein] synthase II similar to Yersinia pestis CO92 fabF and Yersinia pestis KIM fabF. Contains Protein kinase (Interpro|IPR000719%2C (GO:0006468)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)) gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2253 YP_2254 YP2254 acpP3 acpP3 2501439 2501675 - acyl carrier protein similar to Yersinia pestis CO92 acpP and Yersinia pestis KIM acpP. Contains Acyl carrier protein (ACP) (Interpro|IPR003231%2C (GO:0006633)). Contains Phosphopantetheine attachment site (Interpro|IPR006162). Contains Phosphopantetheine-binding domain (Interpro|IPR006163) gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2254 YP_2255 YP2255 fabG10 fabG10 2501829 2502563 - 3-oxoacyl-[acyl-carrier protein] reductase similar to Yersinia pestis CO92 fabG and Yersinia pestis KIM fabG. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Ribosomal protein P2 (Interpro|IPR001859%2C (GO:0006412)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2255 YP_2256 YP2256 fabD2 fabD2 2502577 2503506 - malonyl CoA-acyl carrier protein transacylase similar to Yersinia pestis CO92 fabD and Yersinia pestis KIM fabD. Contains Acyl transferase domain (Interpro|IPR001227%2C (GO:0008152)%2C (GO:0016740)). Contains Malonyl CoA-acyl carrier protein transacylase (Interpro|IPR004410%2C (GO:0006633)) gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2256 YP_2257 YP2257 fabH2 fabH2 2503544 2504494 - 3-oxoacyl-[acyl-carrier-protein] synthase III similar to Yersinia pestis CO92 fabH and Yersinia pestis KIM fabH. Contains Beta-ketoacyl-acyl carrier protein synthase III (FabH) (Interpro|IPR004655%2C (GO:0006633)) gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2257 YP_2258 YP2258 plsX plsX 2504501 2505535 - fatty acid/phospholipid synthesis protein similar to Yersinia pestis CO92 YPO1596 and Yersinia pestis KIM plsX. Contains Fatty acid synthesis plsX protein (Interpro|IPR003664%2C (GO:0006633)) gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2258 YP_2259 YP2259 rpmF rpmF 2505569 2505736 - 50S ribosomal protein L32 similar to Yersinia pestis CO92 YPO1595 and Yersinia pestis KIM rpmF. Contains Ribosomal protein S32%2C bacterial and organelle form (Interpro|IPR005718%2C (GO:0015934)) gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2259 YP_2260 YP2260 YP_2260 2505749 2506273 - putative metal-binding similar to Yersinia pestis CO92 YPO1594 and Yersinia pestis KIM y1752%3B possibly nucleic acid-binding protein gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2260 YP_2261 YP2261 maf2 maf2 2506403 2507011 + Nucleotide-binding protein implicated in inhibition of septum formation similar to Yersinia pestis KIM y1751. Contains Maf-like protein (Interpro|IPR003697). Contains Maf-like protein (Interpro|IPR003697) gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2261 YP_2262 YP2262 rluA1 rluA1 2507134 2508096 - ribosomal large subunit pseudouridine synthaseC similar to Yersinia pestis CO92 YPO1591 and similar to Yersinia pestis KIM y1750(residues 1 to 313 of 313 are similar to residues 22 to 341 of 341 from Yersinia pestis KIM y1750). Contains RNA-binding S4 (Interpro|IPR002942%2C (GO:0003723)). Contains Pseudouridine synthase (Interpro|IPR006145). Contains Pseudouridine synthase%2C Rlu (Interpro|IPR006224%2C (GO:0004730)). Contains Pseudouridine synthase%2C RluD (Interpro|IPR006225%2C (GO:0004730)) gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2262 YP_2263 YP2263 rne rne 2508671 2512336 + ribonuclease E similar to Yersinia pestis CO92 rne. Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains Ribonuclease E and G (Interpro|IPR004659%2C (GO:0006396)) gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2263 YP_2264 YP2264 YP_2264 2512540 2512971 + hypothetical protein similar to Yersinia pestis KIM y1745 gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2264 YP_2265 YP2265 pyrC pyrC 2513116 2514162 + dihydroorotase similar to Yersinia pestis CO92 pyrC and Yersinia pestis KIM pyrC. Contains Dihydroorotase (Interpro|IPR002195%2C (GO:0016812)). Contains Dihydroorotase homodimeric type (Interpro|IPR004721%2C (GO:0019856)). Contains Amidohydrolase (Interpro|IPR006680) gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2265 YP_2266 YP2266 dinI dinI 2514475 2514720 + DNA-damage-inducible protein I similar to Yersinia pestis CO92 dinI gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2266 YP_2267 YP2267 YP_2267 2515485 2516693 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2267 YP_2268 YP2268 solA solA 2517054 2518169 + putative sarcosine oxidase similar to Yersinia pestis CO92 solA. Contains NAD binding site (Interpro|IPR000205). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2268 YP_2269 YP2269 csgD csgD 2518409 2519050 + putative LuxR-family regulatory protein similar to Yersinia pestis CO92 YPO2449 and Yersinia pestis KIM y1741. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)) gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2269 YP_2270 YP2270 perM2 perM2 2519622 2520680 - putative membrane protein similar to Yersinia pestis CO92 YPO2450. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Protein of unknown function UPF0118 (Interpro|IPR002549) gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2270 YP_2271 YP2271 YP_2271 2520829 2521950 - putative enzyme related to sulfurtransferases similar to Yersinia pestis CO92 YPO2451 and Yersinia pestis KIM y1738. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Rhodanese-like (Interpro|IPR001763) gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2271 YP_2272 YP2272 YP_2272 2522255 2522659 - putative membrane protein similar to Yersinia pestis CO92 YPO2453 and Yersinia pestis KIM y1737. gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2272 YP_2274 YP2274 rhaT10 rhaT10 2522947 2523645 - putative membrane protein similar to Yersinia pestis CO92 YPO2455 and Yersinia pestis KIM y1734. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2274 YP_2275 YP2275 ypeI ypeI 2524043 2524699 + N-acylhomoserine lactone synthase YpeI similar to Yersinia pestis CO92 ypeI and Yersinia pestis KIM ypeI. Contains Autoinducer synthesis protein (Interpro|IPR001690%2C (GO:0007165)) gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2275 YP_2276 YP2276 ypeR ypeR 2524692 2525429 - quorum-sensing transcriptional activator YpeR similar to Yersinia pestis CO92 ypeR and Yersinia pestis KIM ypeR. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Autoinducer binding domain (Interpro|IPR005143) gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2276 YP_2277 YP2277 lysR13 lysR13 2525916 2526896 - putative LysR-family transcriptional regulator similar to Yersinia pestis CO92 YPO2458 and Yersinia pestis KIM y1731. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2277 YP_2278 YP2278 proP25 proP25 2527290 2528648 + putative transporter protein similar to Yersinia pestis CO92 YPO2459 and Yersinia pestis KIM y1730. Contains Sugar transporter (Interpro|IPR003663%2C (GO:0016020)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2278 YP_2279 YP2279 YP_2279 2528695 2529198 + hypothetical protein similar to Yersinia pestis CO92 YPO2460 and Yersinia pestis KIM y1729 gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2279 YP_2280 YP2280 tas2 tas2 2529209 2530228 + putative oxidoreductase similar to Yersinia pestis CO92 YPO2461 and Yersinia pestis KIM y1728. Contains Aldo/keto reductase (Interpro|IPR001395). Contains Cl- channel%2C voltage gated (Interpro|IPR001807%2C (GO:0016020)) gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2280 YP_2281 YP2281 YP_2281 2530306 2530860 - hypothetical protein similar to Yersinia pestis CO92 YPO2462 and Yersinia pestis KIM y1727 gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2281 YP_2282 YP2282 YP_2282 2530871 2531875 - hypothetical protein similar to Yersinia pestis CO92 YPO2463 and Yersinia pestis KIM y1726 gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2282 YP_2283 YP2283 YP_2283 2531893 2532843 - hypothetical protein similar to Yersinia pestis CO92 YPO2464 and Yersinia pestis KIM y1725 gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2283 YP_2284 YP2284 YP_2284 2532840 2534186 - hypothetical protein similar to Yersinia pestis CO92 YPO2465 and Yersinia pestis KIM y1724. Contains Myb DNA-binding domain (Interpro|IPR001005%2C (GO:0005634)) gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2284 YP_2286 YP2286 YP_2286 2534595 2537882 - putative helicases similar to Yersinia pestis CO92 YPO2467 and Yersinia pestis KIM y1723. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2286 YP_2287 YP2287 YP_2287 2537879 2538889 - hypothetical protein similar to Yersinia pestis CO92 YPO2468 and Yersinia pestis KIM y1722. gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2287 YP_2288 YP2288 mscS1 mscS1 2539759 2541006 + putative membrane protein similar to Yersinia pestis CO92 YPO2470 and Yersinia pestis KIM y1720. Contains Mechanosensitive (MS) ion channel (Interpro|IPR006685) gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2288 YP_2290 YP2290 YP_2290 2541595 2542869 - putative exported protein similar to Yersinia pestis CO92 YPO2471 and Yersinia pestis KIM y1718 gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2290 YP_2291 YP2291 YP_2291 2542908 2544029 - putative exported protein similar to Yersinia pestis CO92 YPO2472 and Yersinia pestis KIM y1717. gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2291 YP_2292 YP2292 YP_2292 2544146 2545084 - hypothetical protein similar to Yersinia pestis CO92 YPO2473 and Yersinia pestis KIM y1716 gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2292 YP_2293 YP2293 YP_2293 2545111 2546166 - putative glycosylase similar to Yersinia pestis CO92 YPO2474 and Yersinia pestis KIM y1715 gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2293 YP_2294 YP2294 malG4 malG4 2546313 2547137 - sugar ABC transporter%2C permease protein similar to Yersinia pestis CO92 YPO2475 and Yersinia pestis KIM y1714. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2294 YP_2295 YP2295 malF4 malF4 2547138 2548013 - sugar ABC transporter%2C permease protein similar to Yersinia pestis CO92 YPO2476 and Yersinia pestis KIM y1713. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2295 YP_2296 YP2296 ugpB3 ugpB3 2548122 2549558 - putative solute-binding protein similar to Yersinia pestis CO92 YPO2477 and Yersinia pestis KIM y1712. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2296 YP_2297 YP2297 purR6 purR6 2549680 2550720 + LacI-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2478 and Yersinia pestis KIM y1711. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2297 YP_2298 YP2298 manB2 manB2 2550737 2552125 + phosphomannomutase similar to Yersinia pestis CO92 manB and Yersinia pestis KIM cpsG. gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2298 YP_2299 YP2299 mtlK mtlK 2552183 2553304 + putative mannitol transport ATP-binding protein similar to Yersinia pestis CO92 mtlK and Yersinia pestis KIM malK. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2299 YP_2300 YP2300 YP_2300 2553569 2554114 - putative exported protein similar to Yersinia pestis CO92 YPO2481 and Yersinia pestis KIM y1705. gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2300 YP_2301 YP2301 YP_2301 2554372 2554764 - hypothetical protein similar to Yersinia pestis CO92 YPO2482 and Yersinia pestis KIM y1704. gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2301 YP_2302 YP2302 YP_2302 2554924 2555328 - hypothetical protein similar to Yersinia pestis CO92 YPO2483 and Yersinia pestis KIM y1703 gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2302 YP_2303 YP2303 YP_2303 2555470 2555637 - hypothetical protein similar to Yersinia pestis CO92 YPO2484 gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2303 YP_2304 YP2304 YP_2304 2555840 2556037 - hypothetical protein similar to Yersinia pestis CO92 YPO2485 and Yersinia pestis KIM y1702 gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2304 YP_2305 YP2305 fhaB1 fhaB1 2556047 2563783 - putative hemolysin similar to Yersinia pestis CO92 YPO2490 and Yersinia pestis KIM y1697. gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2305 YP_2306 YP2306 fhaC2 fhaC2 2563927 2565615 - putative hemolysin activator protein similar to Yersinia pestis CO92 YPO2491 and Yersinia pestis KIM y1696. Contains Hemolysin activator HlyB (Interpro|IPR005565) gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2306 YP_2307 YP2307 hmp1 hmp1 2566268 2567233 - putative dioxygenase beta subunit similar to Yersinia pestis CO92 YPO2492 and Yersinia pestis KIM y1695. Contains Phthalate dioxygenase reductase (Interpro|IPR000951%2C (GO:0006118)%2C (GO:0008246)). Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains Phenol hydroxylase reductase (Interpro|IPR001221%2C (GO:0006118)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)). Contains 2Fe-2S ferredoxin (Interpro|IPR006058%2C (GO:0006118)%2C (GO:0008042)) gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2307 YP_2308 YP2308 hcaA11 hcaA11 2567329 2568537 - putative dioxygenase alpha subunit similar to Yersinia pestis CO92 YPO2493. Contains Bacterial ring hydroxylating dioxygenase%2C alpha subunit (Interpro|IPR001663%2C (GO:0006725)). Contains Rieske [2Fe-2S] domain (Interpro|IPR005806%2C (GO:0006118)%2C (GO:0016491)) gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2308 YP_2309 YP2309 betT2 betT2 2568570 2570249 - putative quarternary ammonium transport protein similar to Yersinia pestis KIM y1693. Contains BCCT transporter (Interpro|IPR000060%2C (GO:0016020)). Contains Cyclic nucleotide-binding domain (Interpro|IPR000595) gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2309 YP_2310 YP2310 YP_2310 2570582 2570764 - putative membrane protein similar to Yersinia pestis CO92 YPO2495 gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2310 YP_2311 YP2311 leuB1 leuB1 2570833 2571930 - tartrate dehydrogenase similar to Yersinia pestis CO92 YPO2496. Contains Isocitrate/isopropylmalate dehydrogenase (Interpro|IPR001804%2C (GO:0008152)%2C (GO:0016491)) gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2311 YP_2312 YP2312 lysR14 lysR14 2572021 2572962 + putativeLlysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2497 and Yersinia pestis KIM y1691. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2312 YP_2313 YP2313 purR7 purR7 2573209 2574213 + putative LacI-family transcriptional regulatoryprotein similar to Yersinia pestis CO92 YPO2498 and Yersinia pestis KIM y1690. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2313 YP_2314 YP2314 rbsC1 rbsC1 2574346 2575338 - putative sugar transport system%2C permease protein similar to Yersinia pestis CO92 rbsC and Yersinia pestis KIM rbsC. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2314 YP_2315 YP2315 rbsA2 rbsA2 2575335 2576825 - putative sugar transport system%2C ATP-binding protein similar to Yersinia pestis CO92 rbsA and Yersinia pestis KIM rbsA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)). Contains GTP1/OBG family (Interpro|IPR006073). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2315 YP_2316 YP2316 rbsB7 rbsB7 2576865 2577782 - sugar binding protein precursor similar to Yersinia pestis CO92 rbsB and Yersinia pestis KIM y1687. Contains Heat shock protein Hsp70 (Interpro|IPR001023). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2316 YP_2317 YP2317 gutB gutB 2577957 2579144 - putative zinc-binding dehydrogenase similar to Yersinia pestis CO92 gutB and Yersinia pestis KIM y1686. Contains Zinc-containing alcohol dehydrogenase superfamily (Interpro|IPR002085%2C (GO:0008270)) gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2317 YP_2318 YP2318 YP_2318 2579766 2580434 - hypothetical protein similar to Yersinia pestis CO92 YPO2503 gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2318 YP_2319 YP2319 YP_2319 2580630 2581172 - hypothetical protein similar to Yersinia pestis CO92 YPO2504 and Yersinia pestis KIM y1684 gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2319 YP_2320 YP2320 mMT12 mMT12 2581410 2582348 - putative membrane protein similar to Yersinia pestis CO92 YPO2505 and Yersinia pestis KIM y1683. Contains Cation efflux protein (Interpro|IPR002524%2C (GO:0006812)%2C (GO:0016020)) gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2320 YP_2321 YP2321 ompX ompX 2582664 2583194 - putative outer membrane protein similar to Yersinia pestis CO92 ompX and Yersinia pestis KIM ompX. Contains Virulence-related outer membrane protein (Interpro|IPR000758) gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2321 YP_2322 YP2322 rhaT11 rhaT11 2583593 2584480 + putative membrane protein similar to Yersinia pestis CO92 YPO2507 and Yersinia pestis KIM y1680. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2322 YP_2323 YP2323 rimI1 rimI1 2584496 2584993 + Acetyltransferases similar to Yersinia pestis CO92 YPO2508 and Yersinia pestis KIM y1679. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2323 YP_2324 YP2324 tam tam 2585016 2585792 + putative trans-aconitate methyltransferase similar to Yersinia pestis CO92 tam and Yersinia pestis KIM y1678. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)) gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2324 YP_2325 YP2325 dps dps 2586049 2586552 + putative DNA-binding protein similar to Yersinia pestis CO92 dps and Yersinia pestis KIM dps. Contains Ferritin (Interpro|IPR001519%2C (GO:0008199)). Contains DNA-binding protein Dps (Interpro|IPR002177%2C (GO:0006950)) gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2325 YP_2326 YP2326 YP_2326 2586872 2587999 + putative exported protein similar to Yersinia pestis CO92 YPO2511 and Yersinia pestis KIM y1676. Contains TPR repeat (Interpro|IPR001440) gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2326 YP_2327 YP2327 glnH2 glnH2 2588569 2589312 + putative glutamine-binding periplasmic protein similar to Yersinia pestis CO92 glnH and Yersinia pestis KIM glnH. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Ionotropic glutamate receptor (Interpro|IPR001320%2C (GO:0016020)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Lysine-arginine-ornithine-binding periplasmic protein (Interpro|IPR005768%2C (GO:0030288)) gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2327 YP_2328 YP2328 glnP glnP 2589347 2590003 + putative glutamine transport system permease similar to Yersinia pestis CO92 glnP and Yersinia pestis KIM glnP. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2328 YP_2329 YP2329 glnQ3 glnQ3 2590000 2590722 + putative glutamine transport ATP-binding protein similar to Yersinia pestis CO92 glnQ and Yersinia pestis KIM glnQ. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)) gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2329 YP_2330 YP2330 atoS2 atoS2 2590962 2592254 - putative chemotactic transducer similar to Yersinia pestis CO92 YPO2515 and Yersinia pestis KIM y1672. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains PAS-associated C-terminal domain (Interpro|IPR000700%2C (GO:0000160)). Contains PAC motif (Interpro|IPR001610%2C (GO:0007165)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)) gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2330 YP_2331 YP2331 YP_2331 2593023 2594033 - putative SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO2519 and Yersinia pestis KIM y1668. gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2331 YP_2332 YP2332 porA porA 2594321 2594581 + putative exported protein similar to Yersinia pestis CO92 YPO2521 and Yersinia pestis KIM y1667 gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2332 YP_2333 YP2333 trpD2 trpD2 2594963 2595922 - putative glycosyl transferase similar to Yersinia pestis CO92 YPO2522 and Yersinia pestis KIM y1665. Contains Glycosyl transferase%2C family 3 (Interpro|IPR000312%2C (GO:0008152)%2C (GO:0016757)) gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2333 YP_2334 YP2334 caiC caiC 2595988 2597403 - putative O-succinylbenzoic acid--CoA ligase similar to Yersinia pestis CO92 menE. Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)) gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2334 YP_2335 YP2335 menC menC 2597391 2598362 - putative O-succinylbenzoate-CoA synthase similar to Yersinia pestis CO92 menC and Yersinia pestis KIM menC gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2335 YP_2336 YP2336 menB menB 2598362 2599219 - naphthoate synthase similar to Yersinia pestis CO92 menB. Contains Enoyl-CoA hydratase/isomerase (Interpro|IPR001753%2C (GO:0008152)) gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2336 YP_2337 YP2337 mhpC3 mhpC3 2599233 2600051 - putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) similar to Yersinia pestis CO92 YPO2526 and Yersinia pestis KIM y1661. Contains Alpha/beta hydrolase fold (Interpro|IPR000073). Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Prolyl aminopeptidase S33 (Interpro|IPR002410%2C (GO:0006508)). Contains Alpha/beta hydrolase (Interpro|IPR003089%2C (GO:0006725)%2C (GO:0016787)) gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2337 YP_2338 YP2338 menD menD 2600048 2601751 - menaquinone biosynthesis protein similar to Yersinia pestis CO92 menD and Yersinia pestis KIM menD. Contains Pyruvate decarboxylase (Interpro|IPR000399). Contains Menaquinone biosynthesis protein (Interpro|IPR004433%2C (GO:0009234)) gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2338 YP_2339 YP2339 menF menF 2601979 2603352 - menaquinone-specific isochorismate synthase similar to Yersinia pestis CO92 menF and Yersinia pestis KIM menF. Contains Anthranilate synthase component I and chorismate binding protein (Interpro|IPR005801%2C (GO:0009058)) gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2339 YP_2340 YP2340 YP_2340 2603859 2604503 - hypothetical protein similar to Yersinia pestis CO92 YPO2530 and Yersinia pestis KIM y1658 gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2340 YP_2341 YP2341 elaB elaB 2605058 2605405 - putative membrane protein similar to Yersinia pestis CO92 elaB and Yersinia pestis KIM elaB. gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2341 YP_2342 YP2342 YP_2342 2605550 2605717 + hypothetical protein similar to Yersinia pestis KIM y1656 gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2342 YP_2344 YP2344 edd edd 2606292 2608163 - phosphogluconate dehydratase similar to Yersinia pestis CO92 edd and Yersinia pestis KIM edd. Contains Dihydroxy-acid and 6-phosphogluconate dehydratase (Interpro|IPR000581%2C (GO:0008152)). Contains 6-phosphogluconate dehydratase (Interpro|IPR004786%2C (GO:0009255)) gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2344 YP_2345 YP2345 YP_2345 2608173 2608687 - similar to Yersinia pestis CO92 YPO2534 and Yersinia pestis KIM y1653. There is a frameshift mutation following codon 105. The sequence has been checked and is believed to be correct. pseudogene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2345 YP_2346 YP2346 proP26 proP26 2608717 2610072 - putative sugar transporter similar to Yersinia pestis CO92 YPO2535 and Yersinia pestis KIM y1652. Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2346 YP_2347 YP2347 ldhA2 ldhA2 2610579 2611529 - putative D-isomer specific 2-hydroxyacid dehydrogenase family protein similar to Yersinia pestis CO92 YPO2536 and Yersinia pestis KIM y1651. Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain (Interpro|IPR006139%2C (GO:0006564)%2C (GO:0016616)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain (Interpro|IPR006140%2C (GO:0006564)%2C (GO:0016616)) gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2347 YP_2348 YP2348 purR8 purR8 2611995 2612987 - putative LacI-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2537 and Yersinia pestis KIM y1650. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2348 YP_2349 YP2349 YP_2349 2613456 2614739 + putative lipoprotein similar to Yersinia pestis CO92 YPO2538 and Yersinia pestis KIM y1649. Contains Protein of unknown function DUF187 (Interpro|IPR003790) gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2349 YP_2350 YP2350 idnO idnO 2615393 2616262 + gluconate 5-dehydrogenase similar to Yersinia pestis CO92 idnO and Yersinia pestis KIM y1645. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2350 YP_2351 YP2351 idnK idnK 2616311 2616847 + putative thermosensitive gluconokinase similar to Yersinia pestis CO92 idnK and Yersinia pestis KIM gntV. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Carbohydrate kinase%2C thermoresistant glucokinase (Interpro|IPR006001%2C (GO:0005975)%2C (GO:0016301)) gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2351 YP_2352 YP2352 YP_2352 2616925 2617392 + hypothetical protein similar to Yersinia pestis CO92 YPO2541. Contains Conserved hypothetical protein 22 (Interpro|IPR004375%2C (GO:0005554)) gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2352 YP_2353 YP2353 YP_2353 2617730 2618965 - hypothetical protein similar to Yersinia pestis CO92 YPO2542 and Yersinia pestis KIM y1643. gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2353 YP_2354 YP2354 nuoN nuoN 2619156 2620619 - NADH dehydrogenase I chain N similar to Yersinia pestis CO92 nuoN and Yersinia pestis KIM nuoN. Contains NADH/Ubiquinone/plastoquinone (complex I) (Interpro|IPR001750%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH-ubiquinone oxidoreductase%2C chain 4 (Interpro|IPR003918%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2354 YP_2355 YP2355 nuoM nuoM 2620626 2622158 - NADH dehydrogenase I chain M similar to Yersinia pestis CO92 nuoM and Yersinia pestis KIM nuoM. Contains G-protein coupled receptors family 2 (secretin-like) (Interpro|IPR000832%2C (GO:0016020)). Contains NADH/Ubiquinone/plastoquinone (complex I) (Interpro|IPR001750%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH-ubiquinone oxidoreductase%2C chain 5 (Interpro|IPR003916%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH-ubiquinone oxidoreductase%2C chain 4 (Interpro|IPR003918%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2355 YP_2356 YP2356 nuoL nuoL 2622198 2623997 - NADH dehydrogenase I chain L similar to Yersinia pestis CO92 nuoL and Yersinia pestis KIM nuoL. Contains Polycystic kidney disease type 1 protein (Interpro|IPR000434). Contains NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5/L%2C N-terminal (Interpro|IPR001516%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH/Ubiquinone/plastoquinone (complex I) (Interpro|IPR001750%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH-ubiquinone oxidoreductase%2C chain 5 (Interpro|IPR003916%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH-ubiquinone oxidoreductase%2C chain 4 (Interpro|IPR003918%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH-plastoquinone oxidoreductase%2C chain 5 (Interpro|IPR003945%2C Cellular Component: gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2356 YP_2357 YP2357 nuoK nuoK 2624039 2624341 - NADH dehydrogenase i chain k similar to Yersinia pestis CO92 nuoK and Yersinia pestis KIM nuoK. Contains NADH-ubiquinone oxidoreductase%2C chain 4L (Interpro|IPR001133%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains Mitochodrial NADH-ubiquinone oxidoreductase%2C chain 4L (Interpro|IPR003214%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH dehydrogenase (ubiquinone)%2C type 1 (Interpro|IPR003215%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2357 YP_2358 YP2358 nuoJ nuoJ 2624338 2624883 - NADH dehydrogenase I chain J similar to Yersinia pestis CO92 nuoJ and Yersinia pestis KIM nuoJ. Contains NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 6 (Interpro|IPR001457%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH-ubiquinone oxidoreductase%2C chain 2 (Interpro|IPR003917%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2358 YP_2359 YP2359 nuoI nuoI 2624896 2625438 - NADH Dehydrogenase I chain I similar to Yersinia pestis CO92 nuoI and Yersinia pestis KIM nuoI. Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)) gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2359 YP_2360 YP2360 nuoH nuoH 2625453 2626430 - NADH dehydrogenase I chain H similar to Yersinia pestis CO92 nuoH and Yersinia pestis KIM nuoH. Contains Respiratory-chain NADH dehydrogenase%2C subunit 1 (Interpro|IPR001694%2C (GO:0016020)) gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2360 YP_2361 YP2361 nuoG nuoG 2626427 2629171 - NADH dehydrogenase I chain G similar to Yersinia pestis CO92 nuoG and Yersinia pestis KIM nuoG. Contains Respiratory-chain NADH dehydrogenase 75 Kd subunit (Interpro|IPR000283%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molybdopterin oxidoreductase Fe4S4 domain (Interpro|IPR006963) gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2361 YP_2362 YP2362 nuoF nuoF 2629258 2630643 - NADH dehydrogenase I chain F similar to Yersinia pestis CO92 nuoF and Yersinia pestis KIM nuoF. Contains Respiratory-chain NADH dehydrogenase%2C 51 kDa subunit (Interpro|IPR001949%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2362 YP_2363 YP2363 nuoE nuoE 2630640 2631203 - NADH dehydrogenase I chain E similar to Yersinia pestis KIM nuoE. Contains NADH dehydrogenase (ubiquinone)%2C 24 kDa subunit (Interpro|IPR002023%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2363 YP_2364 YP2364 nuoD nuoD 2631206 2633002 - NADH dehydrogenase I chain C/D similar to Yersinia pestis CO92 nuoD and Yersinia pestis KIM nuoC. Contains NADH-ubiquinone oxidoreductase%2C chain 49kDa (Interpro|IPR001135%2C (GO:0006118)%2C (GO:0009497)). Contains NADH dehydrogenase (ubiquinone)%2C 30 kDa subunit (Interpro|IPR001268%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2364 YP_2365 YP2365 nuoB nuoB 2633143 2633820 - NADH dehydrogenase I chain B similar to Yersinia pestis CO92 nuoB and Yersinia pestis KIM nuoB. Contains NADH ubiquinone oxidoreductase domain%2C 20 kDa subunit (Interpro|IPR006137%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains NADH dehydrogenase (ubiquinone)%2C 20 kDa subunit (Interpro|IPR006138%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)) gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2365 YP_2366 YP2366 nuoA nuoA 2633922 2634422 - NADH dehydrogenase I chain A similar to Yersinia pestis KIM nuoA. Contains NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 (Interpro|IPR000440%2C Cellular Component: NADH dehydrogenase complex (ubiquinone) (sensu Eukarya) (GO:0005748)%2C (GO:0006120)%2C (GO:0008137)). Contains Phosphopantetheine attachment site (Interpro|IPR006162) gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2366 YP_2367 YP2367 pecT pecT 2635100 2636044 - LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 pecT and Yersinia pestis KIM lrhA. Contains Eukaryotic thiol (cysteine) protease (Interpro|IPR000169%2C (GO:0006508)). Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2367 YP_2369 YP2369 aat2 aat2 2636822 2638114 + putative aminotransferase similar to Yersinia pestis CO92 aat and Yersinia pestis KIM y1628. gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2369 YP_2370 YP2370 YP_2370 2638265 2638858 + putative hydrolases of HD superfamily similar to Yersinia pestis CO92 YPO2559 and Yersinia pestis KIM y1627. Contains Metal dependent phosphohydrolase%2C HD region (Interpro|IPR003607%2C (GO:0003824)). Contains Metal-dependent phosphohydrolase%2C HD region (Interpro|IPR006674) gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2370 YP_2371 YP2371 YP_2371 2638905 2639174 - putative exported protein similar to Yersinia pestis CO92 YPO2560 gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2371 YP_2372 YP2372 citT2 citT2 2639201 2641093 - putative ion transport protein similar to Yersinia pestis KIM y1626. Contains Arsenical pump membrane protein (Interpro|IPR000802%2C (GO:0016021)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Sodium/sulphate symporter (Interpro|IPR001898%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains TrkA-C (Interpro|IPR006037%2C (GO:0006813)%2C (GO:0008324)) gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2372 YP_2373 YP2373 YP_2373 2641325 2641987 - putative haloacid dehalogenase-like hydrolase similar to Yersinia pestis CO92 YPO2562 and Yersinia pestis KIM y1625. Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402) gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2373 YP_2374 YP2374 YP_2374 2642146 2642643 - hypothetical protein similar to Yersinia pestis CO92 YPO2563 and Yersinia pestis KIM y1624. Contains YfbU domain (Interpro|IPR005587) gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2374 YP_2375 YP2375 YP_2375 2642948 2643403 - hypothetical protein similar to Yersinia pestis CO92 YPO2564 and Yersinia pestis KIM y1623 gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2375 YP_2377 YP2377 ackA ackA 2643825 2645027 + acetate kinase similar to Yersinia pestis CO92 ackA and Yersinia pestis KIM ackA. Contains Acetate and butyrate kinase (Interpro|IPR000890%2C (GO:0005622)%2C (GO:0008152)%2C (GO:0016301)%2C (GO:0016310)%2C (GO:0016774)). Contains Acetate kinase (Interpro|IPR004372%2C (GO:0016301)%2C (GO:0016774)) gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2377 YP_2378 YP2378 pta pta 2645195 2647348 + phosphate acetyltransferase similar to Yersinia pestis CO92 pta and Yersinia pestis KIM pta. Contains Phosphate acetyl/butaryl transferase (Interpro|IPR002505%2C (GO:0008152)%2C (GO:0008415)). Contains Phosphate acetyltransferase (Interpro|IPR004614%2C (GO:0016407)) gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2378 YP_2379 YP2379 purR9 purR9 2647614 2648750 - putative transcriptional regulator similar to Yersinia pestis KIM y1619. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2379 YP_2380 YP2380 ptsN1 ptsN1 2649015 2649458 + phosphotransferase enzyme II%2C A component similar to Yersinia pestis CO92 YPO2569 and Yersinia pestis KIM y1618. Contains Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 (Interpro|IPR002178%2C (GO:0009401)) gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2380 YP_2381 YP2381 sgaB sgaB 2649627 2649914 + Phosphotransferase system component IIB of unknown specificity Best Blastp hit %3D gi|13469797|gb|AAK27336.1| (AF286670) unknown [Escherichia coli]%2C(len:95 aa)%3B. Contains Phosphotransferase system%2C lactose/cellobiose-specific IIB subunit (Interpro|IPR003501%2C (GO:0009401)) gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2381 YP_2382 YP2382 sgaT sgaT 2649927 2651183 + putative membrane protein similar to Yersinia pestis CO92 YPO2782 and Yersinia pestis KIM y1615. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2382 YP_2383 YP2383 mutT4 mutT4 2651300 2651848 - NTP pyrophosphohydrolases including oxidative damage repair enzymes similar to Yersinia pestis CO92 YPO2781 and Yersinia pestis KIM y1614. Contains NUDIX hydrolase (Interpro|IPR000086). Contains Isopentenyl-diphosphate delta-isomerase (Interpro|IPR002667%2C (GO:0008299)) gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2383 YP_2384 YP2384 YP_2384 2652070 2652657 - putative phosphoesterase similar to Yersinia pestis KIM y1613. Contains Protein of unknown function UPF0025 (Interpro|IPR000979%2C (GO:0005554)). Contains Metallo-phosphoesterase (Interpro|IPR004843%2C (GO:0016787)) gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2384 YP_2385 YP2385 rtn2 rtn2 2652845 2653537 - EAL domain similar to Yersinia pestis CO92 YPO2779 and Yersinia pestis KIM y1612. Contains EAL domain (Interpro|IPR001633%2C (GO:0005554)) gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2385 YP_2386 YP2386 YP_2386 2653885 2654799 + putative nucleoside-diphosphate sugar epimerases (SulA family) similar to Yersinia pestis CO92 YPO2778 and Yersinia pestis KIM y1611. gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2386 YP_2387 YP2387 hisP hisP 2654923 2655720 - histidine transport ATP-binding protein HisP similar to Yersinia pestis CO92 hisP and Yersinia pestis KIM hisP. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)) gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2387 YP_2388 YP2388 hisM hisM 2655734 2656450 - histidine transport system permease protein HisM similar to Yersinia pestis CO92 hisM and Yersinia pestis KIM hisM. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2388 YP_2389 YP2389 hisQ hisQ 2656447 2657133 - histidine transport system permease protein HisQ similar to Yersinia pestis CO92 hisQ and Yersinia pestis KIM hisQ. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2389 YP_2390 YP2390 hisJ hisJ 2657236 2658291 - histidine-binding periplasmic protein of high-affinity histidine transport system similar to Yersinia pestis KIM hisJ. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Lysine-arginine-ornithine-binding periplasmic protein (Interpro|IPR005768%2C (GO:0030288)) gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2390 YP_2391 YP2391 ubiX ubiX 2658543 2659130 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase similar to Yersinia pestis KIM ubiX. Contains Flavoprotein (Interpro|IPR003382) gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2391 YP_2392 YP2392 purF purF 2659362 2660879 - amidophosphoribosyltransferase similar to Yersinia pestis CO92 purF and Yersinia pestis KIM purF. Contains Glutamine amidotransferase%2C class-II (Interpro|IPR000583%2C (GO:0008152)%2C (GO:0016003)). Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Purine/pyrimidine phosphoribosyl transferase (Interpro|IPR002375). Contains Amidophosphoribosyl transferase (Interpro|IPR005854%2C (GO:0009113)) gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2392 YP_2393 YP2393 cvpA cvpA 2660892 2661401 - putative colicin V production protein similar to Yersinia pestis CO92 cvpA and Yersinia pestis KIM cvpA. Contains Colicin V production protein (Interpro|IPR003825%2C (GO:0016020)) gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2393 YP_2394 YP2394 dedD dedD 2661713 2662441 - putative membrane protein similar to Yersinia pestis CO92 dedD and Yersinia pestis KIM dedD. Contains Proline-rich extensin (Interpro|IPR002965) gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2394 YP_2395 YP2395 folC folC 2662555 2663937 - putative FolC bifunctional protein similar to Yersinia pestis CO92 folC and Yersinia pestis KIM folC. Contains Cytoplasmic peptidoglycan synthetases%2C N-terminal (Interpro|IPR000713%2C (GO:0005524)). Contains Folylpolyglutamate synthetase (Interpro|IPR001645%2C (GO:0009396)). Contains Cytoplasmic peptidoglycan synthetases%2C C-terminal (Interpro|IPR004101%2C (GO:0016874)) gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2395 YP_2396 YP2396 accD accD 2664108 2665178 - acetyl-coenzyme A carboxylase carboxyl transferase subunit beta similar to Yersinia pestis CO92 accD and Yersinia pestis KIM accD. Contains Acetyl-CoA carboxylase carboxyl transferase%2C beta subunit (Interpro|IPR000438%2C (GO:0009317)) gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2396 YP_2397 YP2397 dedA1 dedA1 2665253 2665915 - putative membrane protein similar to Yersinia pestis CO92 dedA. Contains DedA family (Interpro|IPR000252%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2397 YP_2398 YP2398 truA truA 2666072 2666953 - pseudouridylate synthase I similar to Yersinia pestis KIM truA. Contains tRNA pseudouridine synthase (Interpro|IPR001406) gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2398 YP_2399 YP2399 asd1 asd1 2666953 2667963 - putative aspartate-semialdehyde dehydrogenase similar to Yersinia pestis CO92 asd and Yersinia pestis KIM usg. Contains Semialdehyde dehydrogenase (Interpro|IPR000534%2C (GO:0006520)). Contains Aspartate-semialdehyde dehydrogenase (Interpro|IPR000319%2C (GO:0006520)). Contains Semialdehyde dehydrogenase (Interpro|IPR000534%2C (GO:0006520)) gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2399 YP_2400 YP2400 pdxB pdxB 2668133 2669320 - putative D-isomer specific 2-hydroxyacid dehydrogenase similar to Yersinia pestis CO92 pdxB and Yersinia pestis KIM pdxB. Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain (Interpro|IPR006139%2C (GO:0006564)%2C (GO:0016616)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain (Interpro|IPR006140%2C (GO:0006564)%2C (GO:0016616)) gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2400 YP_2401 YP2401 araC5 araC5 2669307 2670092 - putative AraC-family regulatory protein similar to Yersinia pestis CO92 YPO2762 and Yersinia pestis KIM y1596. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2401 YP_2402 YP2402 rhaT12 rhaT12 2670318 2671235 + putative membrane protein similar to Yersinia pestis CO92 YPO2761 and Yersinia pestis KIM y1595. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2402 YP_2403 YP2403 flk flk 2671521 2672558 + putative flagellar assembly regulatory protein%2CFlk similar to Yersinia pestis CO92 flk and Yersinia pestis KIM div gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2403 YP_2404 YP2404 smfA smfA 2672900 2673430 - putative mannose-resistant/Proteus-like fimbrialprotein similar to Yersinia pestis CO92 YPO2759 and Yersinia pestis KIM smfA. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2404 YP_2405 YP2405 racX racX 2674218 2674913 + putative aspartate/glutamate racemase similar to Yersinia pestis CO92 YPO2758. Contains Asp/Glu racemase (Interpro|IPR001920%2C (GO:0008152)%2C (GO:0016855)). Contains Aspartate racemase (Interpro|IPR004380%2C (GO:0006520)%2C (GO:0016855)) gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2405 YP_2406 YP2406 fabB fabB 2675321 2676520 - 3-oxoacyl-[acyl-carrier-protein] synthase I similar to Yersinia pestis CO92 fabB and Yersinia pestis KIM fabB. Contains Eukaryotic thiol (cysteine) protease (Interpro|IPR000169%2C (GO:0006508)). Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)) gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2406 YP_2407 YP2407 dadA2 dadA2 2676716 2678785 + Glycine/D-amino acid oxidases (deaminating) similar to Yersinia pestis CO92 YPO2756 and Yersinia pestis KIM y1590. gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2407 YP_2408 YP2408 YP_2408 2678963 2679244 - hypothetical protein similar to Yersinia pestis CO92 YPO2755 and Yersinia pestis KIM y1589. gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2408 YP_2409 YP2409 YP_2409 2679299 2679841 - hypothetical protein similar to Yersinia pestis CO92 YPO2754 and Yersinia pestis KIM y1588 gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2409 YP_2410 YP2410 YP_2410 2679941 2680747 - putative membrane protein similar to Yersinia pestis CO92 YPO2753 and Yersinia pestis KIM y1587. Contains Protein of unknown function DUF81 (Interpro|IPR002781) gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2410 YP_2411 YP2411 mepA mepA 2680751 2681620 - putative penicillin-insensitive murein endopeptidase similar to Yersinia pestis CO92 mepA and Yersinia pestis KIM mepA. Contains Proline-rich region (Interpro|IPR000694). Contains Peptidase family U6%2C penicillin-insensitive murein endopeptidase (Interpro|IPR005073%2C (GO:0030288)) gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2411 YP_2412 YP2412 aroC aroC 2681584 2682672 - chorismate synthase similar to Yersinia pestis CO92 aroC and Yersinia pestis KIM aroC. Contains Chorismate synthase (Interpro|IPR000453%2C (GO:0009073)) gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2412 YP_2413 YP2413 hemK2 hemK2 2682746 2683747 - putative rRNA or tRNA methylase similar to Yersinia pestis CO92 YPO2750 and Yersinia pestis KIM y1584. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C N12 class (Interpro|IPR002296%2C (GO:0008170)). Contains Modification methylase HemK family (Interpro|IPR004556%2C (GO:0006479)%2C (GO:0008276)) gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2413 YP_2414 YP2414 YP_2414 2683967 2684578 + hypothetical protein similar to Yersinia pestis KIM y1583. Contains Smr protein/MutS2 C-terminal (Interpro|IPR002625%2C (GO:0006298)) gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2414 YP_2416 YP2416 sixA sixA 2685020 2685511 - putative phosphohistidine phosphatase similar to Yersinia pestis CO92 sixA and Yersinia pestis KIM y1582. Contains Phosphohistidine phosphatase SixA (Interpro|IPR004449%2C (GO:0008969)) gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2416 YP_2417 YP2417 faoA faoA 2686079 2688406 - putative fatty oxidation complex alpha subunit%2C enoyl-CoA hydratase similar to Yersinia pestis CO92 faoA and Yersinia pestis KIM y1580. Contains Enoyl-CoA hydratase/isomerase (Interpro|IPR001753%2C (GO:0008152)). Contains 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal (Interpro|IPR006108). Contains 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain (Interpro|IPR006176). Contains 3-hydroxyacyl-CoA dehydrogenase (Interpro|IPR006180) gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2417 YP_2418 YP2418 paaJ paaJ 2688403 2689713 - putative 3-ketoacyl-CoA thiolase similar to Yersinia pestis CO92 YPO2746 and Yersinia pestis KIM y1579. Contains Thiolase (Interpro|IPR002155) gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2418 YP_2419 YP2419 YP_2419 2690000 2690302 - hypothetical protein similar to Yersinia pestis CO92 YPO2745 and Yersinia pestis KIM y1578. Contains Conserved hypothetical protein 743 (Interpro|IPR005272) gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2419 YP_2420 YP2420 fadL fadL 2690704 2691975 + putative long-chain fatty acid transport protein similar to Yersinia pestis CO92 fadL and Yersinia pestis KIM fadL. Contains Beta and gamma crystallin (Interpro|IPR001064). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Membrane protein involved in aromatic hydrocarbon degradation (Interpro|IPR005017) gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2420 YP_2421 YP2421 vacJ vacJ 2692082 2692858 - lipoprotein precursor similar to Yersinia pestis KIM vacJ gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2421 YP_2422 YP2422 nrfG2 nrfG2 2692882 2694108 - putative cytochrome c-type biogenesis protein similar to Yersinia pestis CO92 YPO2743 and Yersinia pestis KIM y1575. Contains TPR repeat (Interpro|IPR001440) gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2422 YP_2423 YP2423 ccmH ccmH 2694108 2694620 - putative cytochrome c-type biogenesis protein similar to Yersinia pestis CO92 ccmH and Yersinia pestis KIM y1574. Contains Cytochrome C biogenesis protein (Interpro|IPR005616) gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2423 YP_2424 YP2424 ccmG ccmG 2694617 2695183 - thiol:disulfide interchange protein DsbE similar to Yersinia pestis CO92 ccmG and Yersinia pestis KIM dsbE. Contains Periplasmic protein thiol:disulfide oxidoreductase DsbE (Interpro|IPR004799%2C (GO:0030288)). Contains Thioredoxin type domain (Interpro|IPR006662%2C (GO:0006118)). Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2424 YP_2425 YP2425 ccmF ccmF 2695180 2697150 - putative cytochrome c-type biogenesis protein similar to Yersinia pestis CO92 ccmF and Yersinia pestis KIM ccmF. Contains Inositol phosphatase/fructose-1%2C6-bisphosphatase (Interpro|IPR000146). Contains Cytochrome c assembly protein (Interpro|IPR002541%2C (GO:0016020)). Contains Cytochrome c-type biogenesis protein (Interpro|IPR003567%2C (GO:0017004)). Contains Cytochrome c-type biogenesis protein CcmF (Interpro|IPR003568%2C (GO:0017004)) gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2425 YP_2426 YP2426 ccmE ccmE 2697147 2697641 - putative cytochrome c-type biogenesis protein similar to Yersinia pestis CO92 ccmE and Yersinia pestis KIM ccmE. Contains CcmE/CycJ proteins (Interpro|IPR004329%2C (GO:0017004)) gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2426 YP_2427 YP2427 ccmD ccmD 2697638 2697940 - putative heme exporter protein D similar to Yersinia pestis CO92 ccmD and Yersinia pestis KIM ccmD. Contains Heme exporter protein D (CcmD) (Interpro|IPR007078) gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2427 YP_2428 YP2428 ccmC2 ccmC2 2697937 2698674 - putative heme exporter protein C similar to Yersinia pestis CO92 ccmC and Yersinia pestis KIM ccmC. Contains Cytochrome c assembly protein (Interpro|IPR002541%2C (GO:0016020)). Contains Cytochrome c-type biogenesis protein CcmC (Interpro|IPR003557%2C (GO:0017004)) gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2428 YP_2429 YP2429 ccmB ccmB 2698737 2699423 - heme exporter protein B similar to Yersinia pestis CO92 ccmB and Yersinia pestis KIM ccmB. Contains Cytochrome c-type biogenesis protein CcmB (Interpro|IPR003544%2C (GO:0017004)) gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2429 YP_2430 YP2430 ccmA3 ccmA3 2699366 2700022 - putative heme exporter protein A similar to Yersinia pestis CO92 ccmA and Yersinia pestis KIM ccmA. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Heme exporter protein CcmA (Interpro|IPR005895%2C (GO:0030288)) gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2430 YP_2431 YP2431 YP_2431 2700467 2700934 - putative exported protein similar to Yersinia pestis CO92 YPO2733 and similar to Yersinia pestis KIM y1566(residues 1 to 155 of 155 are similar to residues 14 to 168 of 168 from Yersinia pestis KIM y1566) gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2431 YP_2432 YP2432 lemA lemA 2701550 2702092 + putative exported protein similar to Yersinia pestis CO92 lemA gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2432 YP_2433 YP2433 YP_2433 2702097 2704134 + similar to Yersinia pestis CO92 YPO2731 and Yersinia pestis KIM y1564. There is a fraimshift afer codon 51. The sequence has been checked and believed to becorrect.C-terminal region is glycine and serine rich. pseudogene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2433 YP_2434 YP2434 phnA phnA 2704510 2704851 + putative Zn-ribbon-containing protein involved in phosphonate metabolism similar to Yersinia pestis CO92 YPO2730 and Yersinia pestis KIM phnA. Contains PhnA protein (Interpro|IPR004624) gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2434 YP_2435 YP2435 YP_2435 2704926 2706596 - similar to putative membrane protein [Yersinia pestis CO92 YPO729]%3B disrupted by IS100 element pseudogene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2435 YP_2436 YP2436 YP_2436 2705225 2706433 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2436 YP_2437 YP2437 YP_2437 2706621 2707100 - hypothetical protein similar to Yersinia pestis CO92 YPO2728 and Yersinia pestis KIM y1561 gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2437 YP_2438 YP2438 YP_2438 2707213 2708019 - hypothetical protein similar to Yersinia pestis CO92 YPO2727 and Yersinia pestis KIM y1560 gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2438 YP_2439 YP2439 YP_2439 2708059 2708886 - hypothetical protein similar to Yersinia pestis CO92 YPO2726 and Yersinia pestis KIM y1559. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2439 YP_2440 YP2440 YP_2440 2708886 2709146 - hypothetical protein similar to Yersinia pestis KIM y1557 gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2440 YP_2441 YP2441 vgrG2 vgrG2 2709245 2711578 - Phage late control gene D protein (GPD) similar to Yersinia pestis CO92 YPO2725 and Yersinia pestis KIM y1555. Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Proline-rich region (Interpro|IPR000694). Contains Proline-rich extensin (Interpro|IPR002965). Contains Arginase/agmatinase/formiminoglutamase (Interpro|IPR006035%2C (GO:0003824)). Contains Rhs element Vgr protein (Interpro|IPR006533) gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2441 YP_2442 YP2442 icmF2 icmF2 2711872 2715450 - putative membrane protein similar to Yersinia pestis CO92 YPO2724 and Yersinia pestis KIM y1553. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2442 YP_2443 YP2443 YP_2443 2715708 2716493 - similar to Yersinia pestis CO92 YPO2723%3B this CDS may be disrupted by IS100 element. pseudogene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2443 YP_2444 YP2444 dnaC_19 dnaC_19 2716560 2717342 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2444 YP_2445 YP2445 YP_2445 2717339 2718361 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2445 YP_2446 YP2446 YP_2446 2718451 2719185 + similar to Yersinia pestis KIM y1218. This CDS seems to have been disrupted by IS100 element. pseudogene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2446 YP_2447 YP2447 proX proX 2719415 2720419 - glycine betaine-binding periplasmic protein similar to Yersinia pestis CO92 proX and Yersinia pestis KIM proX gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2447 YP_2448 YP2448 proW3 proW3 2720467 2721633 - glycine betaine/L-proline transport system permease similar to Yersinia pestis CO92 proW and Yersinia pestis KIM proW. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2448 YP_2449 YP2449 proV2 proV2 2721626 2722942 - glycine betaine/L-proline transport ATP-binding protein similar to Yersinia pestis CO92 proV and Yersinia pestis KIM proV. Contains CBS domain (Interpro|IPR000644). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Glycine betaine/L-proline transport ATP-binding subunit (Interpro|IPR005892%2C (GO:0016020)) gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2449 YP_2450 YP2450 nrdF nrdF 2723501 2724472 - ribonucleoside-diphosphate reductase 2 beta chain similar to Yersinia pestis CO92 nrdF and Yersinia pestis KIM nrdF. Contains Ribonucleotide reductase (Interpro|IPR000358%2C (GO:0009186)) gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2450 YP_2451 YP2451 nrdE nrdE 2724615 2726765 - ribonucleoside-diphosphate reductase 2 alpha chain similar to Yersinia pestis CO92 nrdE and Yersinia pestis KIM nrdE. Contains Ribonucleotide reductase large subunit (Interpro|IPR000788%2C (GO:0006260)) gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2451 YP_2452 YP2452 nrdI nrdI 2726747 2727193 - NrdI protein similar to Yersinia pestis CO92 nrdI. Contains NrdI protein (Interpro|IPR004465) gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2452 YP_2453 YP2453 nrdH nrdH 2727165 2727401 - putative glutaredoxin similar to Yersinia pestis CO92 nrdH and Yersinia pestis KIM nrdH gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2453 YP_2455 YP2455 YP_2455 2728765 2729100 + hypothetical protein similar to Yersinia pestis CO92 YPO2653 and Yersinia pestis KIM y1227 gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2455 YP_2456 YP2456 YP_2456 2729198 2729299 - similar to N-termianl 34 residues of putative membrane protein [Yersinia pestis CO92 YPO2654]%3B this CDS seems to duplicate near the IS285 and lost the C-reminal residues. pseudogene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2456 YP_2457 YP2457 tnpA_3 tnpA_3 2729335 2730459 - putative transposase for IS285 element similar to Yersinia pestis KIM y2038. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2457 YP_2458 YP2458 YP_2458 2730453 2730944 - putative membrane protein similar to Yersinia pestis CO92 YPO2654 and Yersinia pestis KIM y1228. gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2458 YP_2459 YP2459 YP_2459 2731109 2731513 - hypothetical protein similar to Yersinia pestis KIM y1229. gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2459 YP_2460 YP2460 cspB cspB 2731925 2732167 + cold shock protein similar to Yersinia pestis CO92 cspB and Yersinia pestis KIM cspG. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2460 YP_2461 YP2461 oppA4 oppA4 2732988 2734565 + putative solute-binding protein similar to Yersinia pestis CO92 YPO2660 and Yersinia pestis KIM y1231. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)) gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2461 YP_2462 YP2462 dppB3 dppB3 2734565 2735533 + putative membrane protein similar to Yersinia pestis CO92 YPO2661 and Yersinia pestis KIM y1232. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2462 YP_2463 YP2463 dppC3 dppC3 2735530 2736336 + binding-protein-dependent transport protein similar to Yersinia pestis CO92 YPO2662 and Yersinia pestis KIM y1233. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2463 YP_2464 YP2464 dppD2 dppD2 2736336 2737142 + putative transport ATPase similar to Yersinia pestis CO92 YPO2663 and Yersinia pestis KIM y1234. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2464 YP_2465 YP2465 oppF3 oppF3 2737096 2737800 + putative transport ATPase similar to Yersinia pestis CO92 YPO2664 and Yersinia pestis KIM y1235. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2465 YP_2466 YP2466 ureA ureA 2738999 2739301 + urease gamma subunit similar to Yersinia pestis CO92 ureA and Yersinia pestis KIM ureA. Contains Urease%2C gamma subunit (Interpro|IPR002026%2C (GO:0009039)%2C (GO:0016151)) gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2466 YP_2467 YP2467 ureB ureB 2739312 2739788 + urease (urea amidohydrolase) beta subunit similar to Yersinia pestis KIM ureB. Contains Urease%2C beta subunit (Interpro|IPR002019%2C (GO:0009039)%2C (GO:0016151)) gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2467 YP_2468 YP2468 ureC ureC 2739878 2741596 + urease alpha subunit similar to Yersinia pestis CO92 ureC. Contains Urease (Interpro|IPR005848%2C (GO:0009039)%2C (GO:0016151)). Contains Amidohydrolase (Interpro|IPR006680) gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2468 YP_2469 YP2469 ureE ureE 2741892 2742587 + urease accessory protein similar to Yersinia pestis CO92 ureE and Yersinia pestis KIM ureE. Contains Urease accessory protein UreE (Interpro|IPR004029%2C (GO:0006461)%2C (GO:0016151)) gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2469 YP_2470 YP2470 ureF ureF 2742609 2743295 + urease accessory protein similar to Yersinia pestis CO92 ureF and Yersinia pestis KIM ureF. Contains Urease accessory protein UreF (Interpro|IPR002639%2C (GO:0006807)%2C (GO:0016151)) gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2470 YP_2471 YP2471 ureG ureG 2743422 2744084 + urease accessory protein similar to Yersinia pestis CO92 ureG and Yersinia pestis KIM ureG. Contains Dynamin (Interpro|IPR001401%2C (GO:0005525)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains HypB/UreG%2C nucleotide-binding (Interpro|IPR002894%2C (GO:0005505)). Contains Urease accessory protein UreG (Interpro|IPR004400%2C (GO:0006461)%2C (GO:0016151)) gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2471 YP_2472 YP2472 ureD ureD 2744081 2745047 + similar to gi|14917053|sp|P52316|URED_YERPS Urease accessory protein ureD%2C gi|6531999|gb|AAA87858.2| (U40842) urease accessory protein [Yersinia pseudotuberculosis]%2C(321 aa). There is a frameshit after codon 268. The sequence has been checked and believed to be correct. pseudogene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2472 YP_2473 YP2473 YP_2473 2745239 2746231 + putative urea transporter similar to Yersinia pestis CO92 YPO2672 and Yersinia pestis KIM y1244. Contains Urea transporter (Interpro|IPR004937%2C (GO:0016021)) gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2473 YP_2474 YP2474 hoxN hoxN 2746356 2747438 + putative nickel transport protein similar to Yersinia pestis CO92 YPO2673 and Yersinia pestis KIM y1245. Contains High-affinity nickel-transport protein (Interpro|IPR004688%2C (GO:0016021)) gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2474 YP_2475 YP2475 YP_2475 2747607 2747936 - putative exported protein similar to Yersinia pestis CO92 YPO2674 and Yersinia pestis KIM hdeB gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2475 YP_2476 YP2476 kch kch 2748549 2749724 + putative potassium channel protein similar to Yersinia pestis CO92 YPO2675 and Yersinia pestis KIM y1247. Contains K+ channel%2C pore region (Interpro|IPR001622%2C (GO:0016020)). Contains Voltage-dependent potassium channel (Interpro|IPR003091%2C (GO:0008076)). Contains TrkA-N (Interpro|IPR003148%2C (GO:0006813)). Contains EAG/ELK/ERG potassium channel (Interpro|IPR003938%2C (GO:0016020)) gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2476 YP_2477 YP2477 crcB2 crcB2 2749822 2750226 - putative membrane protein similar to Yersinia pestis CO92 YPO2676. Contains Camphor resistance CrcB protein (Interpro|IPR003691) gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2477 YP_2478 YP2478 crcB3 crcB3 2750242 2750622 - putative membrane protein similar to Yersinia pestis CO92 YPO2677 and Yersinia pestis KIM y1249. Contains Camphor resistance CrcB protein (Interpro|IPR003691) gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2478 YP_2479 YP2479 YP_2479 2750711 2750890 - hypothetical protein similar to Yersinia pestis KIM y1250. gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2479 YP_2480 YP2480 celA celA 2751633 2751980 + PTS system%2C cellobiose-specific IIB component similar to Yersinia pestis CO92 celA and Yersinia pestis KIM celA. Contains Phosphotransferase system%2C lactose/cellobiose-specific IIB subunit (Interpro|IPR003501%2C (GO:0009401)) gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2480 YP_2481 YP2481 celB celB 2751991 2753352 + PTS system%2C cellobiose-specific IIC component similar to Yersinia pestis CO92 celB and Yersinia pestis KIM celB. Contains Phosphotransferase system%2C EIIC (Interpro|IPR003352%2C (GO:0016020)). Contains PTS lactose/cellobiose IIC component (Interpro|IPR004501%2C (GO:0016021)). Contains PTS system cellobiose-specific IIC component (Interpro|IPR004796%2C (GO:0016021)) gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2481 YP_2482 YP2482 celC celC 2753519 2753866 + PTS system%2C cellobiose-specific IIA component similar to Yersinia pestis CO92 celC and Yersinia pestis KIM celC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Phosphotransferase system PTS%2C lactose/cellobiose-specific IIA subunit (Interpro|IPR003188%2C (GO:0016020)) gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2482 YP_2483 YP2483 celD celD 2753903 2754745 + cel operon repressor similar to Yersinia pestis CO92 celD and Yersinia pestis KIM celD. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains Cupin domain (Interpro|IPR007113) . Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2483 YP_2484 YP2484 YP_2484 2754797 2755558 + hypothetical protein similar to Yersinia pestis CO92 YPO2682 and Yersinia pestis KIM y1255. Contains Transforming growth factor%2C beta 1 (Interpro|IPR003939%2C (GO:0016049)). Contains YdjC-like protein (Interpro|IPR006879) gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2484 YP_2485 YP2485 YP_2485 2755565 2755741 - hypothetical protein similar to Yersinia pestis CO92 YPO2683 gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2485 YP_2486 YP2486 YP_2486 2755853 2756221 - putative exported protein similar to Yersinia pestis CO92 YPO2684 and Yersinia pestis KIM y1256. gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2486 YP_2487 YP2487 seqA seqA 2756701 2757243 + putative negative regulator of replication initiation similar to Yersinia pestis CO92 seqA and Yersinia pestis KIM seqA. Contains SeqA protein (Interpro|IPR005621) gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2487 YP_2488 YP2488 pgm pgm 2757274 2758959 + phosphoglucomutase similar to Yersinia pestis KIM pgm. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Phosphoglucomutase/phosphomannomutase (Interpro|IPR005841%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase C terminal (Interpro|IPR005843%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (Interpro|IPR005844%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II (Interpro|IPR005845%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III (Interpro|IPR005846%2C (GO:0005975)%2C (GO:0016868)). Contains Phosphoglucomutase%2C alpha-D-glucose phosphate-specific (Interpro|IPR005852%2C (GO:0005975)) gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2488 YP_2489 YP2489 YP_2489 2759333 2759575 + hypothetical protein no significant database match found gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2489 YP_2490 YP2490 YP_2490 2759703 2760131 - putative membrane protein similar to Yersinia pestis CO92 YPO2687 and Yersinia pestis KIM y1260. Contains Protein of unknown function DUF6 (Interpro|IPR000620) gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2490 YP_2491 YP2491 kdpE kdpE 2760226 2760855 - two-component regulatory protein response regulator KdpE similar to Yersinia pestis CO92 kdpE and Yersinia pestis KIM kdpE. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2491 YP_2492 YP2492 kdpD1 kdpD1 2761148 2763874 - two-component regulatory protein sensor kinase KdpD similar to Yersinia pestis CO92 kdpD and Yersinia pestis KIM kdpD. Contains Lipocalin-related protein and Bos/Can/Equ allergen (Interpro|IPR000566%2C (GO:0006810)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Osmosensitive K+ channel His kinase sensor (Interpro|IPR003852%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2492 YP_2493 YP2493 kdpC kdpC 2763884 2764534 - putative potassium-transporting ATPase C chain similar to Yersinia pestis CO92 kdpC and Yersinia pestis KIM kdpC. Contains K+ transporting ATPase%2C KdpC subunit (Interpro|IPR003820%2C (GO:0006813)%2C (GO:0016020)) gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2493 YP_2494 YP2494 kdpB kdpB 2764698 2766764 - putative potassium-transporting ATPase B chain similar to Yersinia pestis CO92 kdpB and Yersinia pestis KIM kdpB. Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)) gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2494 YP_2495 YP2495 kdpA kdpA 2766858 2768546 - putative potassium-transporting ATPase A chain similar to Yersinia pestis CO92 kdpA. Contains K+ transporting ATPase%2C A subunit (Interpro|IPR004623%2C (GO:0006813)%2C (GO:0016021)) gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2495 YP_2496 YP2496 YP_2496 2768963 2769247 + hypothetical protein similar to Yersinia pestis KIM y1267 gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2496 YP_2498 YP2498 YP_2498 2769652 2770068 + hypothetical protein similar to Yersinia pestis CO92 YPO2694 and Yersinia pestis KIM y1268. gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2498 YP_2499 YP2499 phrB phrB 2770198 2771661 + putative deoxyribodipyrimidine photolyase similar to Yersinia pestis CO92 phrB and Yersinia pestis KIM phrB. Contains Deoxyribodipyrimidine photolyase%2C class 1 (Interpro|IPR002081%2C (GO:0003913)). Contains FAD binding domain of DNA photolyase (Interpro|IPR005101). Contains DNA photolyase (Interpro|IPR006049%2C (GO:0006281)). Contains DNA photolyase%2C N-terminal (Interpro|IPR006050%2C (GO:0006281)). Contains DNA photolyase%2C C-terminal (Interpro|IPR006051%2C (GO:0006281)) gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2499 YP_2500 YP2500 YP_2500 2771652 2772689 + hypothetical protein similar to Yersinia pestis KIM y1271. Contains Cyclic-AMP phosphodiesterase%2C class-II (Interpro|IPR000396%2C (GO:0006198)) gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2500 YP_2501 YP2501 YP_2501 2772829 2773575 + hypothetical protein similar to Yersinia pestis CO92 YPO2697 and Yersinia pestis KIM y1272. Contains Protein of unknown function DUF34 (Interpro|IPR002678) gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2501 YP_2502 YP2502 YP_2502 2774194 2774847 + similar to many putative carboxylase entries from E.coli and Shigella flexneri%2Csuch as gi|15800414|ref|NP_286426.1| putative carboxylase [Escherichia coli O157:H7 EDL933](218 aa). There is a nonsense mutation (amber) at codon 182. The sequence has been checked and is believed to be correct. Contains Protein of unknown function DUF213 (Interpro|IPR003833) pseudogene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2502 YP_2503 YP2503 dUR1 dUR1 2774844 2775794 + Allophanate hydrolase subunit 2 similar to Yersinia pestis CO92 YPO2699 and Yersinia pestis KIM y1275. Contains Urea amidolyase-related (Interpro|IPR003778) gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2503 YP_2504 YP2504 YP_2504 2775752 2776528 + putative lactam utilization protein similar to Yersinia pestis KIM y1276. Contains LamB/YcsF family (Interpro|IPR005501) gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2504 YP_2505 YP2505 YP_2505 2776613 2777344 + putative membrane protein similar to Yersinia pestis CO92 YPO2701 and Yersinia pestis KIM y1277. gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2505 YP_2506 YP2506 YP_2506 2777341 2778360 + putative membrane protein similar to Yersinia pestis CO92 YPO2702. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2506 YP_2507 YP2507 pcp1 pcp1 2778370 2779017 + putative pyrrolidone-carboxylate peptidase similar to Yersinia pestis CO92 pcp and Yersinia pestis KIM y1280. Contains Pyrrolidone-carboxylate/pyroglutamyl peptidase I (C15) (Interpro|IPR000816%2C (GO:0006508)) gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2507 YP_2508 YP2508 ung ung 2779108 2779818 - putative uracil-DNA glycosylase similar to Yersinia pestis CO92 ung and Yersinia pestis KIM ung. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Uracil-DNA glycosylase (Interpro|IPR002043%2C (GO:0006281)). Contains Uracil-DNA glycosylase%2C not poxvirus (Interpro|IPR003249%2C (GO:0006281)). Contains Uracil-DNA glycosylase superfamily (Interpro|IPR005122) gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2508 YP_2509 YP2509 YP_2509 2780078 2780530 + Acid-induced glycyl radical enzyme similar to Yersinia pestis CO92 YPO2705 and Yersinia pestis KIM y1282. Contains Formate C-acetyltransferase glycine radical (Interpro|IPR001150%2C (GO:0008152)) gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2509 YP_2510 YP2510 yplA yplA 2780709 2781671 + phospholipase A similar to Yersinia pestis CO92 yplA. Contains Lipase (Interpro|IPR000734%2C (GO:0006629)) gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2510 YP_2511 YP2511 yplB yplB 2781749 2782405 + putative phospholipase A accessory protein similar to Yersinia pestis CO92 yplB and Yersinia pestis KIM yplB. Contains Ankyrin (Interpro|IPR002110) gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2511 YP_2512 YP2512 srmB2 srmB2 2782536 2783861 - ATP-dependent RNA helicase similar to Yersinia pestis CO92 srmB and Yersinia pestis KIM srmB. Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)). Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2512 YP_2513 YP2513 smtA7 smtA7 2784101 2784859 + SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO2709 and Yersinia pestis KIM y1288. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C N12 class (Interpro|IPR002296%2C (GO:0008170)) gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2513 YP_2514 YP2514 nadB nadB 2785142 2786779 - L-aspartate oxidase similar to Yersinia pestis CO92 nadB and Yersinia pestis KIM nadB. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal (Interpro|IPR003953%2C (GO:0006118)%2C (GO:0008246)). Contains Fumarate reductase/succinate dehydrogenase flavoprotein%2C C-terminal (Interpro|IPR004112%2C (GO:0008246)%2C (GO:0016491)). Contains L-aspartate oxidase (Interpro|IPR005288). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2514 YP_2515 YP2515 rpoE rpoE 2786967 2787542 + RNA polymerase sigma E factor similar to Yersinia pestis CO92 rpoE and Yersinia pestis KIM rpoE. Contains Sigma factor%2C ECF subfamily (Interpro|IPR000838%2C (GO:0016987)) gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2515 YP_2516 YP2516 rseA rseA 2787568 2788224 + sigma E factor negative regulatory protein similar to Yersinia pestis CO92 rseA and Yersinia pestis KIM rseA. Contains Anti sigma-E protein RseA%2C N-terminal (Interpro|IPR005572). Contains Anti sigma-E protein RseA%2C C-terminal (Interpro|IPR005573) gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2516 YP_2517 YP2517 rseB rseB 2788224 2789180 + sigma E factor regulatory protein similar to Yersinia pestis CO92 rseB and Yersinia pestis KIM rseB. Contains MucB/RseB family (Interpro|IPR005588) gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2517 YP_2518 YP2518 rseC rseC 2789177 2789632 + sigma E factor regulatory protein similar to Yersinia pestis CO92 rseC and Yersinia pestis KIM rseC. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)) gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2518 YP_2519 YP2519 YP_2519 2789653 2790543 - putative membrane protein similar to Yersinia pestis CO92 YPO2715 and Yersinia pestis KIM y1294. gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2519 YP_2520 YP2520 lepA lepA 2791007 2792806 + putative GTP-binding elongation factor similar to Yersinia pestis CO92 lepA and Yersinia pestis KIM lepA. Contains Elongation factor G%2C C-terminal (Interpro|IPR000640%2C (GO:0006414)). Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains GTP-binding protein LepA (Interpro|IPR006297) gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2520 YP_2521 YP2521 lepB lepB 2792816 2793814 + signal peptidase I similar to Yersinia pestis CO92 lepB and Yersinia pestis KIM lepB. Contains Bacterial signal peptidase S26A (Interpro|IPR000223%2C (GO:0006508)%2C (GO:0016020)). Contains Signal peptidase (Interpro|IPR000508%2C (GO:0006508)%2C (GO:0016020)) gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2521 YP_2522 YP2522 rnc rnc 2794166 2794846 + ribonuclease III similar to Yersinia pestis CO92 rnc and Yersinia pestis KIM rnc. Contains Ribonuclease III family (Interpro|IPR000999%2C (GO:0006396)). Contains Double-stranded RNA binding (DsRBD) domain (Interpro|IPR001159%2C (GO:0005622)) gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2522 YP_2523 YP2523 era era 2794843 2795754 + putative GTP-binding protein similar to Yersinia pestis CO92 era and Yersinia pestis KIM era. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains Type 2 KH domain (Interpro|IPR004044%2C (GO:0003676)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains GTP-binding domain (Interpro|IPR005289). Contains GTP-binding protein Era (Interpro|IPR005662%2C (GO:0008151)) gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2523 YP_2524 YP2524 recO recO 2795758 2796489 + DNA repair protein similar to Yersinia pestis CO92 recO and Yersinia pestis KIM recO. Contains Recombination protein O%2C RecO (Interpro|IPR003717%2C (GO:0006310)) gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2524 YP_2525 YP2525 pdxJ pdxJ 2796648 2797379 + pyridoxal phosphate biosynthetic protein PdxJ similar to Yersinia pestis CO92 pdxJ and Yersinia pestis KIM pdxJ. Contains Pyridoxal phosphate biosynthetic protein PdxJ (Interpro|IPR004569%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0008615)) gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2525 YP_2526 YP2526 acpS acpS 2797379 2797759 + holo-[acyl-carrier protein] synthase similar to Yersinia pestis CO92 acpS and Yersinia pestis KIM acpS. Contains Holo-acyl carrier protein synthase (Interpro|IPR002582%2C (GO:0008152)%2C (GO:0016740)). Contains Phosphopantethiene-protein transferase domain (Interpro|IPR004568) gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2526 YP_2527 YP2527 tnp_26 tnp_26 2797910 2798419 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2527 YP_2528 YP2528 napF1 napF1 2798575 2798835 - Ferredoxin 2 similar to Yersinia pestis KIM y1303. Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)) gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2528 YP_2529 YP2529 YP_2529 2798997 2801795 - similar to putative RpiR-family transcriptional regulatory protein [Yersinia pestis CO92]%3B disrupted by IS100 element pseudogene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2529 YP_2530 YP2530 YP_2530 2799521 2800543 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2530 YP_2531 YP2531 dnaC_20 dnaC_20 2800540 2801322 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2531 YP_2532 YP2532 YP_2532 2802003 2802890 + putative glucokinase protein similar to Yersinia pestis CO92 YPO2925 and Yersinia pestis KIM y1305. Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)). Contains Glucokinase regulatory protein (Interpro|IPR005486). Contains Glucokinase regulatory-like protein (Interpro|IPR005488) gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2532 YP_2533 YP2533 serB2 serB2 2803117 2803812 + putative membrane protein similar to Yersinia pestis CO92 YPO2924 and Yersinia pestis KIM y1306. Contains HAD superfamily (subfamily IF) hydrolase YfhB (Interpro|IPR006435) gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2533 YP_2534 YP2534 YP_2534 2803922 2804485 + putative zinc-binding protein similar to Yersinia pestis CO92 YPO2923 and Yersinia pestis KIM y1307. Contains Cytidine/deoxycytidylate deaminase%2C zinc-binding region (Interpro|IPR002125%2C (GO:0016787)) gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2534 YP_2535 YP2535 mltE2 mltE2 2804594 2806054 - putative membrane protein similar to Yersinia pestis CO92 YPO2922 and Yersinia pestis KIM y1308. Contains SLT domain (Interpro|IPR000189). Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)) gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2535 YP_2536 YP2536 purL purL 2806370 2810260 + phosphoribosylformyl-glycineamide synthetase similar to Yersinia pestis KIM purL. Contains AIR synthase related protein (Interpro|IPR000728%2C (GO:0003824)) gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2536 YP_2537 YP2537 YP_2537 2810672 2811250 - hypothetical protein similar to Yersinia pestis CO92 YPO2919 and Yersinia pestis KIM y1310. gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2537 YP_2538 YP2538 YP_2538 2811573 2812181 - putative exported protein similar to Yersinia pestis CO92 YPO2918 and Yersinia pestis KIM y1311. gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2538 YP_2539 YP2539 YP_2539 2813146 2813370 + hypothetical protein no significant database match found gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2539 YP_2540 YP2540 tnp_27 tnp_27 2813360 2813818 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2540 YP_2541 YP2541 baeS5 baeS5 2814024 2815475 + two-component system sensor kinase similar to Yersinia pestis CO92 YPO2916 and Yersinia pestis KIM y1313. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2541 YP_2542 YP2542 YP_2542 2815479 2816546 + hypothetical protein similar to Yersinia pestis KIM y1314. Contains Proline-rich extensin (Interpro|IPR002965) gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2542 YP_2543 YP2543 atoC2 atoC2 2816509 2817846 + two-component system response regulator similar to Yersinia pestis CO92 YPO2914. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Sigma-54 factor interaction domain (Interpro|IPR002078%2C (GO:0000160)%2C (GO:0003677)%2C (GO:0006355)). Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2543 YP_2544 YP2544 nadE nadE 2818006 2819628 + putative glutamine-dependent NAD similar to Yersinia pestis CO92 nadE and Yersinia pestis KIM y1316. Contains Nitrilase/cyanide hydratase (Interpro|IPR000132%2C (GO:0016810)). Contains Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (Interpro|IPR003010%2C (GO:0006807)%2C (GO:0016810)). Contains NAD+ synthase (Interpro|IPR003694%2C (GO:0009435)) gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2544 YP_2545 YP2545 glnB glnB 2819643 2819981 + nitrogen regulatory protein P-II similar to Yersinia pestis CO92 glnB and Yersinia pestis KIM glnB. Contains Nitrogen regulatory protein P-II (Interpro|IPR002187%2C (GO:0006808)%2C (GO:0030234)). Contains P-II protein urydylation site (Interpro|IPR002332) gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2545 YP_2546 YP2546 YP_2546 2820150 2821083 - similar to gi|6136726|sp|P45552|YHFZ_ECOLI Hypothetical protein yhfZ%2C(len:273 aa).There is a frameshift after codon 189. The sequence has been checked and believed to be correct. pseudogene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2546 YP_2547 YP2547 hmp2 hmp2 2821514 2822704 - flavohemoprotein similar to Yersinia pestis CO92 hmp and Yersinia pestis KIM hmpA. Contains Phthalate dioxygenase reductase (Interpro|IPR000951%2C (GO:0006118)%2C (GO:0008246)). Contains Globin (Interpro|IPR000971%2C (GO:0015671)). Contains Phenol hydroxylase reductase (Interpro|IPR001221%2C (GO:0006118)). Contains Oxidoreductase FAD/NAD(P)-binding (Interpro|IPR001433%2C (GO:0006118)%2C (GO:0008246)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)) gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2547 YP_2548 YP2548 glyA glyA 2823245 2824498 + serine hydroxymethyltransferase similar to Yersinia pestis CO92 glyA and Yersinia pestis KIM glyA. Contains Glycine hydroxymethyltransferase (Interpro|IPR001085%2C (GO:0006730)) gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2548 YP_2550 YP2550 ail2 ail2 2824942 2825490 + attachment invasion locus protein similar to Yersinia pestis CO92 ail and similar to Yersinia pestis KIM ompX (residues 1 to 182 of 182 are similar to residues 13 to 194 of 194 from Yersinia pestis KIM ompX). Contains Virulence-related outer membrane protein (Interpro|IPR000758). Contains Virulence-related outer membrane protein (Interpro|IPR000758) gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2550 YP_2551 YP2551 hcaT hcaT 2825842 2826999 + putative transport permease protein similar to Yersinia pestis CO92 hcaT and Yersinia pestis KIM hcaT. Contains Proton/sugar symporter%2C LacY family (Interpro|IPR000576%2C (GO:0016020)). Contains Bacterial general secretion pathway protein F (Interpro|IPR003004%2C (GO:0015628)) gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2551 YP_2552 YP2552 YP_2552 2826996 2828357 - putative RNA-binding protein similar to Yersinia pestis CO92 YPO2903. Contains Transcriptional antiterminator bglG (Interpro|IPR001550%2C (GO:0006355)) gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2552 YP_2553 YP2553 YP_2553 2828499 2829173 + putative exported protein similar to Yersinia pestis CO92 YPO2902 and Yersinia pestis KIM y1329 gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2553 YP_2554 YP2554 YP_2554 2829164 2830186 + putative membrane protein similar to Yersinia pestis CO92 YPO2901 and Yersinia pestis KIM y1330. gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2554 YP_2555 YP2555 suhB suhB 2830285 2831088 - putative inositol monophosphatase familyprotein similar to Yersinia pestis CO92 YPO2899 and Yersinia pestis KIM suhB. Contains Inositol phosphatase/fructose-1%2C6-bisphosphatase (Interpro|IPR000146). Contains Inositol monophosphatase (Interpro|IPR000760%2C (GO:0004437)) gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2555 YP_2556 YP2556 lasT lasT 2831207 2831980 + putative SpoU-family rRNA methylase similar to Yersinia pestis CO92 YPO2898 and Yersinia pestis KIM y1332. Contains tRNA/rRNA methyltransferase (SpoU) (Interpro|IPR001537%2C (GO:0008173)). Contains RNA methyltransferase TrmH family%2C group 1 (Interpro|IPR004384%2C (GO:0008173)) gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2556 YP_2557 YP2557 YP_2557 2832073 2832630 + putative transcriptional regulator similar to Yersinia pestis CO92 YPO2897 and Yersinia pestis KIM y1333. Contains Protein of unknown function UPF0074 (Interpro|IPR000944%2C (GO:0005554)) gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2557 YP_2558 YP2558 nifS_2 nifS_2 2832684 2833913 + putative aminotransferase similar to Yersinia pestis CO92 YPO2896 and Yersinia pestis KIM y1334. Contains Aminotransferase%2C class V (Interpro|IPR000192%2C (GO:0008152)%2C (GO:0008483)). Contains Aminotransferase%2C class V (Interpro|IPR000192%2C (GO:0008152)%2C (GO:0008483)) gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2558 YP_2559 YP2559 nifU nifU 2833944 2834330 + NifU family protein similar to Yersinia pestis CO92 nifU and Yersinia pestis KIM y1335. Contains Nitrogen-fixing NifU-like%2C N-terminal (Interpro|IPR002871) gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2559 YP_2560 YP2560 iscA3 iscA3 2834600 2834923 + iron-sulfur cluster assembly protein similar to Yersinia pestis CO92 YPO2894 and Yersinia pestis KIM y1336. Contains Protein of unknown function%2C HesB/YadR/YfhF (Interpro|IPR000361%2C (GO:0005554)) gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2560 YP_2561 YP2561 YP_2561 2834889 2835080 + hypothetical protein similar to Yersinia pestis KIM y1337. Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)) gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2561 YP_2562 YP2562 hscB hscB 2835058 2835558 + chaperone protein HscB similar to Yersinia pestis CO92 hscB and Yersinia pestis KIM y1338. Contains Heat shock protein DnaJ%2C N-terminal (Interpro|IPR001623). Contains Co-chaperone Hsc20 (Interpro|IPR004640%2C (GO:0003767)) gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2562 YP_2563 YP2563 hscA hscA 2835801 2837738 + chaperone protein HscA similar to Yersinia pestis CO92 hscA and Yersinia pestis KIM hscA. Contains Heat shock protein Hsp70 (Interpro|IPR001023) gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2563 YP_2564 YP2564 fdx2 fdx2 2837741 2838076 + putative [4Fe-4S] ferredoxin similar to Yersinia pestis CO92 fdx and Yersinia pestis KIM fdx. Contains Ferredoxin (Interpro|IPR001041%2C (GO:0006118)%2C (GO:0008042)). Contains Adrenodoxin (Interpro|IPR001055%2C (GO:0006118)%2C (GO:0009492)) gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2564 YP_2565 YP2565 YP_2565 2838106 2838306 + hypothetical protein similar to Yersinia pestis CO92 YPO2890 and Yersinia pestis KIM y1341 gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2565 YP_2566 YP2566 pepB pepB 2838446 2839744 + peptidase B similar to Yersinia pestis CO92 pepB and Yersinia pestis KIM pepB. Contains Cytosol aminopeptidase (Interpro|IPR000819%2C (GO:0006508)) gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2566 YP_2567 YP2567 sseB sseB 2839823 2840776 + enhanced serine sensitivity protein SseB similar to Yersinia pestis CO92 YPO2888 and Yersinia pestis KIM sseB gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2567 YP_2568 YP2568 yapB2 yapB2 2841049 2843874 - N-terminal of putative autotransporter YapB in Y.pestis CO92%2C the length of entire CDS is 3510%3B yapB in CO92 is a pseudogene due to a framshif%2C this region possesses the same framshift with CO92%3B this CDS has been disrputed by IS285%2C and C-terminal located in 3059390 to 3060079. The rearrangement has been confirmed. pseudogene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2568 YP_2569 YP2569 YP_2569 2843946 2845154 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2569 YP_2570 YP2570 YP_2570 2845190 2846765 - similar to C-terminal of many outer membrane usher protein%2C such as gi|15599279|ref|NP_252773.1| probable fimbrial biogenesis usher protein [Pseudomonas aeruginosa PA01(844 aa)%3B and to gi|15836686|ref|NP_297374.1| outer membrane usher protein precursor [Xylella fastidiosa 9a5c](901 aa). This CDS has been disrupted by IS285 element and the N-terminal locates in 3061395 to 3062540. The reaarangement has been confirmed. pseudogene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2570 YP_2571 YP2571 ecpD2 ecpD2 2846854 2847633 - putative pili chaperone protein similar to Yersinia pestis CO92 YPO2944 and Yersinia pestis KIM ecpD. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)). Contains HMW glutenin (Interpro|IPR001419%2C (GO:0045735)). Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2571 YP_2572 YP2572 fimA4 fimA4 2847772 2848326 - putative fimbrial protein similar to Yersinia pestis KIM y1539. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2572 YP_2573 YP2573 clpA3 clpA3 2848518 2851268 - putative Clp ATPase similar to Yersinia pestis KIM y1538. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)) gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2573 YP_2574 YP2574 YP_2574 2851976 2853856 + hypothetical protein similar to Yersinia pestis CO92 YPO2947 and Yersinia pestis KIM y1537. gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2574 YP_2575 YP2575 YP_2575 2853856 2854881 + hypothetical protein similar to Yersinia pestis CO92 YPO2948 gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2575 YP_2576 YP2576 YP_2576 2854980 2856161 + hypothetical protein similar to Yersinia pestis CO92 YPO2949. Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)). Contains Flagellar hook-length control protein (Interpro|IPR001635%2C (GO:0009424)) gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2576 YP_2577 YP2577 YP_2577 2856168 2857199 + putative fimbrial protein similar to Yersinia pestis CO92 YPO2950 and Yersinia pestis KIM y1533 gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2577 YP_2578 YP2578 YP_2578 2857239 2858577 + similar to Yersinia pestis CO92 YPO2951 and Yersinia pestis KIM y1532. There is a frameshift mutation following codon 199. The sequence has been checked and is believed to be correct. pseudogene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2578 YP_2579 YP2579 mukB2 mukB2 2858523 2859275 + Uncharacterized protein involved in chromosome partitioning similar to Yersinia pestis KIM y1531 gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2579 YP_2580 YP2580 ompA3 ompA3 2859276 2860958 + putative membrane protein similar to Yersinia pestis CO92 YPO2953 and Yersinia pestis KIM y1530. Contains MotY protein (Interpro|IPR001035%2C (GO:0001539)%2C (GO:0009288)). Contains Bacterial outer membrane protein (Interpro|IPR006664). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2580 YP_2581 YP2581 YP_2581 2860955 2861437 + hypothetical protein similar to Yersinia pestis CO92 YPO2954 and Yersinia pestis KIM y1529 gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2581 YP_2582 YP2582 citB3 citB3 2861795 2862397 - putative luxR-family regulatory protein similar to Yersinia pestis CO92 YPO2955 and Yersinia pestis KIM y1528. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)) gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2582 YP_2583 YP2583 mltB2 mltB2 2863673 2864785 - putative membrane-bound lytic murein transglycosylase B similar to Yersinia pestis CO92 mltB and Yersinia pestis KIM mltB gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2583 YP_2584 YP2584 sfuA sfuA 2865096 2866115 + iron(III)-binding periplasmic protein similar to Yersinia pestis CO92 sfuA and Yersinia pestis KIM yfuA. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 1 domain (Interpro|IPR006061%2C (GO:0006810)) gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2584 YP_2585 YP2585 sfuB sfuB 2866156 2867757 + iron(III)-transport system permease similar to Yersinia pestis CO92 sfuB and Yersinia pestis KIM yfuB. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2585 YP_2586 YP2586 yfuC yfuC 2867754 2868803 + iron(III)-transport ATP-binding protein similar to Yersinia pestis CO92 sfuC and Yersinia pestis KIM yfuC. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2586 YP_2587 YP2587 YP_2587 2868876 2869400 - putative membrane protein similar to Yersinia pestis CO92 YPO2961 and Yersinia pestis KIM y1523 gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2587 YP_2588 YP2588 hcp5 hcp5 2869861 2870346 + Hemolysin-coregulated protein (uncharacterized) similar to Yersinia pestis CO92 YPO2962 and Yersinia pestis KIM y1522 gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2588 YP_2589 YP2589 YP_2589 2870576 2871424 - hypothetical protein similar to Yersinia pestis CO92 YPO2963 and Yersinia pestis KIM y1521 gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2589 YP_2590 YP2590 dmsA2 dmsA2 2872219 2874681 + putative dimethyl sulfoxide reductase chain A protein similar to Yersinia pestis CO92 dmsA and Yersinia pestis KIM y1519. Contains Twin-arginine translocation pathway signal (Interpro|IPR006311). Contains Prokaryotic molybdopterin oxidoreductase (Interpro|IPR006655%2C (GO:0006118)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molydopterin dinucleotide binding domain (Interpro|IPR006657). Contains Molybdopterin oxidoreductase Fe4S4 domain (Interpro|IPR006963). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311). Contains Prokaryotic molybdopterin oxidoreductase (Interpro|IPR006655%2C (GO:0006118)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molydopterin dinucleotide binding domain (Interpro|IPR006657). Contains Molybdopterin oxidoreductase Fe4S4 domain (Interpro|IPR006963) gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2590 YP_2591 YP2591 dmsB2 dmsB2 2874693 2875310 + putative dimethyl sulfoxide reductase chain B protein similar to Yersinia pestis CO92 dmsB and Yersinia pestis KIM dmsB. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 3Fe-4S ferredoxin (Interpro|IPR001080%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 3Fe-4S ferredoxin (Interpro|IPR001080%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)) gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2591 YP_2592 YP2592 dmsC2 dmsC2 2875255 2876088 + anaerobic dimethyl sulfoxide reductase subunit B similar to Yersinia pestis KIM y1517 gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2592 YP_2593 YP2593 torD3 torD3 2876492 2877166 + putative component of anaerobic dehydrogenases similar to Yersinia pestis CO92 YPO2968 and Yersinia pestis KIM y1516. gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2593 YP_2594 YP2594 napF2 napF2 2877163 2877732 + putative iron-sulfur protein similar to Yersinia pestis CO92 YPO2969 and Yersinia pestis KIM y1515. gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2594 YP_2595 YP2595 YP_2595 2877978 2878634 - putative lipoprotein similar to Yersinia pestis CO92 YPO2970 and Yersinia pestis KIM y1514 gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2595 YP_2596 YP2596 nrfG3 nrfG3 2878631 2879032 - TPR-repeat-containing proteins similar to Yersinia pestis KIM y1513 gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2596 YP_2597 YP2597 csgG csgG 2879014 2879748 - putative lipoprotein similar to Yersinia pestis CO92 YPO2972 and Yersinia pestis KIM y1512. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Curli production assembly/transport component CsgG (Interpro|IPR005534) gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2597 YP_2598 YP2598 YP_2598 2880266 2880706 + hypothetical protein similar to Yersinia pestis CO92 YPO2973 and Yersinia pestis KIM y1511. gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2598 YP_2599 YP2599 cybB3 cybB3 2880801 2881400 - putative cytochrome similar to Yersinia pestis KIM y1510. Contains Nickel-dependent hydrogenase b-type cytochrome subunit (Interpro|IPR000516%2C (GO:0016020)%2C (GO:0016491)) gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2599 YP_2600 YP2600 avtA1 avtA1 2881532 2882767 - putative aminotransferase similar to Yersinia pestis CO92 YPO2975 and Yersinia pestis KIM y1507. Contains 1-aminocyclopropane-1-carboxylate synthase (Interpro|IPR001176%2C (GO:0009058)%2C (GO:0016847)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2600 YP_2601 YP2601 YP_2601 2883033 2884280 + hypothetical protein similar to Yersinia pestis CO92 YPO2976 and Yersinia pestis KIM y1506 gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2601 YP_2602 YP2602 glk glk 2884358 2885329 - glucokinase similar to Yersinia pestis CO92 glk and similar to Yersinia pestis KIM glk(residues 1 to 323 of 323 are similar to residues 3 to 324 of 324 from Yersinia pestis KIM glk). Contains Glucokinase (Interpro|IPR003836%2C (GO:0006096)) gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2602 YP_2603 YP2603 putP3 putP3 2885510 2886037 - putative membrane protein similar to Yersinia pestis CO92 YPO2978 and Yersinia pestis KIM y1504. Contains Beta and gamma crystallin (Interpro|IPR001064) gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2603 YP_2604 YP2604 lysR15 lysR15 2886089 2886967 + putative lysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO2979 and Yersinia pestis KIM y1503. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2604 YP_2605 YP2605 tas3 tas3 2887103 2888092 + putative ion channel protein similar to Yersinia pestis CO92 YPO2980 and Yersinia pestis KIM y1502. Contains Aldo/keto reductase (Interpro|IPR001395). Contains KCNAB voltage-gated K+ channel%2C beta subunit (Interpro|IPR005399%2C (GO:0016021)) gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2605 YP_2606 YP2606 YP_2606 2888308 2888676 + putative exported protein similar to Yersinia pestis CO92 YPO2981 and Yersinia pestis KIM y1501. gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2606 YP_2607 YP2607 mntH mntH 2888769 2889998 - manganese transport protein MntH similar to Yersinia pestis CO92 mntH and Yersinia pestis KIM mntH. Contains Natural resistance-associated macrophage protein (Interpro|IPR001046%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2607 YP_2608 YP2608 nupC1 nupC1 2890449 2891633 + nucleoside permease similar to Yersinia pestis CO92 nupC and Yersinia pestis KIM nupC. Contains Na+ dependent nucleoside transporter (Interpro|IPR002668%2C (GO:0016020)) gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2608 YP_2609 YP2609 gltX gltX 2892867 2894282 + glutamyl-tRNA synthetase similar to Yersinia pestis CO92 gltX and Yersinia pestis KIM gltX. Contains Glutamyl-tRNA synthetase%2C class Ic (Interpro|IPR000924%2C (GO:0006424)). Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Glutamyl-tRNA synthetase bacterial/mitochondrial (Interpro|IPR004527%2C (GO:0006424)) gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2609 YP_2610 YP2610 YP_2610 2894778 2895389 + hypothetical protein similar to Yersinia pestis CO92 YPO2986 and Yersinia pestis KIM y1496. gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2610 YP_2612 YP2612 YP_2612 2895674 2895868 + hypothetical protein similar to Yersinia pestis KIM y1494. gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2612 YP_2613 YP2613 YP_2613 2895969 2896211 - hypothetical protein similar to Yersinia pestis CO92 YPO2988 and Yersinia pestis KIM y1493. gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2613 YP_2614 YP2614 ligA ligA 2896204 2898216 - DNA ligase similar to Yersinia pestis CO92 ligA and Yersinia pestis KIM lig. Contains Helix-hairpin-helix motif (Interpro|IPR000445%2C (GO:0003677)). Contains BRCT domain (Interpro|IPR001357). Contains NAD-dependent DNA ligase (Interpro|IPR001679%2C (GO:0006281)). Contains Helix-hairpin-helix DNA-binding%2C class 1 (Interpro|IPR003583%2C (GO:0005622)). Contains Zn-finger in NAD-dependent DNA ligase%2C C4 type (Interpro|IPR004149%2C (GO:0006281)). Contains NAD-dependent DNA ligase OB-fold domain (Interpro|IPR004150%2C (GO:0006281)) gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2614 YP_2615 YP2615 zipA zipA 2898307 2899293 - putative cell division protein similar to Yersinia pestis CO92 YPO2990 and Yersinia pestis KIM zipA. gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2615 YP_2616 YP2616 cysZ cysZ 2899542 2900276 + putative membrane protein similar to Yersinia pestis CO92 YPO2991 and Yersinia pestis KIM cysZ. gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2616 YP_2617 YP2617 cysK2 cysK2 2900433 2901401 + cysteine synthase A similar to Yersinia pestis CO92 cysK and Yersinia pestis KIM cysK. Contains Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site (Interpro|IPR001216%2C (GO:0006535)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Cysteine synthase K/M (Interpro|IPR005856%2C (GO:0006535)). Contains Cysteine synthase K (Interpro|IPR005859%2C (GO:0006535)) gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2617 YP_2618 YP2618 ptsH ptsH 2901900 2902157 + PTS system%2C phosphocarrier protein similar to Yersinia pestis CO92 ptsH and Yersinia pestis KIM ptsH. Contains Phosphocarrier HPr protein (Interpro|IPR000032%2C (GO:0009401)). Contains Histidine phosphorylation site in HPr protein (Interpro|IPR001020%2C (GO:0009401)). Contains HPr protein%2C serine phosphorylation site (Interpro|IPR002114%2C (GO:0009401)) gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2618 YP_2619 YP2619 ptsI ptsI 2902206 2903933 + PTS sytem%2C enzyme I component similar to Yersinia pestis CO92 ptsI and Yersinia pestis KIM ptsI. Contains PEP-utilizing enzyme (Interpro|IPR000121%2C (GO:0016310)%2C (GO:0016772)). Contains Phosphoenolpyruvate-protein phosphotransferase (Interpro|IPR006318) gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2619 YP_2620 YP2620 crr crr 2903982 2904491 + PTS system%2C glucose-specific IIA component similar to Yersinia pestis CO92 crr and Yersinia pestis KIM crr. Contains Sugar-specific permease%2C EIIA 1 domain (Interpro|IPR001127%2C (GO:0016020)) gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2620 YP_2621 YP2621 tnp_28 tnp_28 2904634 2905143 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2621 YP_2622 YP2622 baeS6 baeS6 2905362 2906711 - putative two-component system sensor kinase similar to Yersinia pestis CO92 YPO2997 and Yersinia pestis KIM y1483. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2622 YP_2623 YP2623 cpxR2 cpxR2 2906737 2907420 - putative two-component system response regulator similar to Yersinia pestis CO92 YPO2998 and Yersinia pestis KIM cpxR. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2623 YP_2624 YP2624 acrA7 acrA7 2907608 2908813 + putative HlyD family secretion protein similar to Yersinia pestis CO92 YPO2999 and Yersinia pestis KIM y1481. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2624 YP_2625 YP2625 YP_2625 2908817 2910853 + putative ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO3000 and Yersinia pestis KIM y1480. Contains Flavin-containing monooxygenase FMO (Interpro|IPR000960%2C (GO:0006118)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Protein of unknown function DUF214 (Interpro|IPR003838). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)) gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2625 YP_2626 YP2626 hcaD hcaD 2911108 2912754 - putative pyridine nucleotide-disulfide oxidoreductase similar to Yersinia pestis CO92 YPO3001 and Yersinia pestis KIM y1479. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains NAD binding site (Interpro|IPR000205). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Flavin-containing amine oxidase (Interpro|IPR001613%2C (GO:0006118)). Contains Rhodanese-like (Interpro|IPR001763). Contains Pyridine nucleotide-disulphide oxidoreductase dimerisation domain (Interpro|IPR004099%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006118)%2C (GO:0016491)) gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2626 YP_2627 YP2627 putP4 putP4 2912814 2914274 - putative permease similar to Yersinia pestis CO92 YPO3002 and Yersinia pestis KIM y1478. Contains Na+/solute symporter (Interpro|IPR001734%2C (GO:0016020)) gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2627 YP_2628 YP2628 YP_2628 2914271 2914468 - putative membrane protein similar to Yersinia pestis CO92 YPO3003 gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2628 YP_2629 YP2629 YP_2629 2914611 2915845 - similar to Lactococcus lactis aminopeptidase P PepP TR:AAK04789 (EMBL:AE006302) (352 aa) and to the previously sequenced Yersinia pestis protein TR:Q9ZC60 (EMBL:AL031866) (405 aa). similar to YPO1950. There is a possible frameshift mutation after codon 51. The sequence has been checked and is believed to be correct. Contains Metallopeptidase family M24 (Interpro|IPR000994%2C (GO:0006508)%2C (GO:0008235)). Contains Leghaemoglobin (Interpro|IPR001032%2C (GO:0015671)). Contains Methionine aminopeptidase (Interpro|IPR001714%2C (GO:0006508)) pseudogene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2629 YP_2630 YP2630 malY malY 2915864 2917090 - putative aminotransferase similar to Yersinia pestis CO92 YPO3006 and Yersinia pestis KIM y1475. Contains 1-aminocyclopropane-1-carboxylate synthase (Interpro|IPR001176%2C (GO:0009058)%2C (GO:0016847)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2630 YP_2631 YP2631 YP_2631 2917642 2919171 + putative membrane protein similar to Yersinia pestis CO92 YPO3007 and Yersinia pestis KIM y1474. Contains Von Willebrand factor%2C type A (Interpro|IPR002035) gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2631 YP_2632 YP2632 baeS7 baeS7 2919404 2920948 + putative two-component sensor histidine kinase similar to Yersinia pestis CO92 YPO3008 and Yersinia pestis KIM y1473. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2632 YP_2633 YP2633 ompR2 ompR2 2920945 2921652 + putative response regulator similar to Yersinia pestis KIM y1472. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2633 YP_2634 YP2634 YP_2634 2922033 2923265 - hypothetical protein similar to Yersinia pestis CO92 YPO3010 and Yersinia pestis KIM y1471. Contains Leucine-rich repeat (Interpro|IPR001611) gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2634 YP_2635 YP2635 cysM1 cysM1 2923510 2924388 - cysteine synthase B similar to Yersinia pestis CO92 cysM and Yersinia pestis KIM cysM. Contains Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site (Interpro|IPR001216%2C (GO:0006535)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)). Contains Cysteine synthase K/M (Interpro|IPR005856%2C (GO:0006535)). Contains Cysteine synthase M (Interpro|IPR005858%2C (GO:0006535)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)) gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2635 YP_2636 YP2636 cysA cysA 2924559 2925650 - sulfate transport ATP-binding protein similar to Yersinia pestis CO92 cysA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Sulphate transport system permease protein 1 (Interpro|IPR005666%2C (GO:0006810)%2C (GO:0019866)) gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2636 YP_2637 YP2637 cysW cysW 2925640 2926515 - sulfate transport system permease protein CysW similar to Yersinia pestis CO92 cysW and Yersinia pestis KIM cysW. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2637 YP_2638 YP2638 cysT cysT 2926515 2927348 - sulfate transport system permease protein CysT similar to Yersinia pestis CO92 cysT and Yersinia pestis KIM cysU. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2638 YP_2639 YP2639 cysP cysP 2927348 2928385 - thiosulfate-binding protein similar to Yersinia pestis CO92 cysP and Yersinia pestis KIM cysP. Contains Prokaryotic sulfate-/thiosulfate-binding protein (Interpro|IPR000957%2C (GO:0030288)). Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2639 YP_2640 YP2640 nanT nanT 2928700 2930232 - putative sugar transporter similar to Yersinia pestis CO92 YPO3016 and Yersinia pestis KIM nanT. Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2640 YP_2641 YP2641 rpiR5 rpiR5 2930837 2931715 - putative rpiR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3017 and Yersinia pestis KIM y1464. Contains Helix-turn-helix protein RpiR (Interpro|IPR000281%2C (GO:0006355)). Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)) gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2641 YP_2643 YP2643 YP_2643 2931904 2932374 - hypothetical protein similar to Yersinia pestis KIM y1462. Contains Conserved hypothetical protein 22 (Interpro|IPR004375%2C (GO:0005554)) gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2643 YP_2644 YP2644 nagC7 nagC7 2932456 2933328 - putative sugar kinase similar to Yersinia pestis CO92 YPO3020 and Yersinia pestis KIM y1461. Contains ROK family (Interpro|IPR000600) gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2644 YP_2645 YP2645 YP_2645 2933597 2934724 + putative membrane protein similar to Yersinia pestis KIM y1460. Contains Leucine-rich repeat (Interpro|IPR001611) gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2645 YP_2646 YP2646 nanE nanE 2934930 2935631 + Putative N-acetylmannosamine-6-phosphate epimerase similar to Yersinia pestis CO92 YPO3023 and Yersinia pestis KIM y1459. Contains FMN/related compound-binding core (Interpro|IPR003009) gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2646 YP_2647 YP2647 dapA1 dapA1 2935688 2936587 + putative N-acetylneuraminate lyase similar to Yersinia pestis CO92 YPO3024 and Yersinia pestis KIM y1458. Contains Dihydrodipicolinate synthetase (Interpro|IPR002220) gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2647 YP_2648 YP2648 YP_2648 2936685 2937632 - putative iron-dependent peroxidase similar to Yersinia pestis CO92 YPO3025 and Yersinia pestis KIM y1457. Contains Dyp-type peroxidase (Interpro|IPR006314) gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2648 YP_2649 YP2649 YP_2649 2937762 2938373 - putative lipoprotein similar to Yersinia pestis CO92 YPO3026 and Yersinia pestis KIM y1456 gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2649 YP_2650 YP2650 YP_2650 2938732 2939145 + putative exported protein similar to Yersinia pestis CO92 YPO3027 and Yersinia pestis KIM y1455. Contains Conserved hypothetical protein 156 (Interpro|IPR005220) gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2650 YP_2651 YP2651 YP_2651 2939632 2941911 + putative autotransporter similar to Yersinia pestis CO92 YPO3028 and Yersinia pestis KIM y1454. Contains Pertactin virulence factor%2C C-terminal (Interpro|IPR003991%2C (GO:0007155)). Contains Pertactin domain (Interpro|IPR004899). Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2651 YP_2652 YP2652 YP_2652 2942003 2942419 - putative membrane protein similar to Yersinia pestis CO92 YPO3029 and Yersinia pestis KIM y1453 gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2652 YP_2653 YP2653 YP_2653 2942525 2942710 + hypothetical protein similar to Yersinia pestis CO92 YPO3030 gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2653 YP_2654 YP2654 rimI2 rimI2 2942892 2943317 - putative acetyltransferase similar to Yersinia pestis CO92 YPO3031 and Yersinia pestis KIM y1452. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2654 YP_2655 YP2655 hemF hemF 2943600 2944529 + coproporphyrinogen III oxidase%2C aerobic HemF similar to Yersinia pestis CO92 hemF and Yersinia pestis KIM hemF. Contains Coproporphyrinogen III oxidase (Interpro|IPR001260%2C (GO:0006779)) gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2655 YP_2656 YP2656 YP_2656 2944529 2944987 + hypothetical protein similar to Yersinia pestis CO92 YPO3033 and Yersinia pestis KIM y1450. Contains Protein of unknown function DUF188 (Interpro|IPR003791) gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2656 YP_2657 YP2657 sfcA2 sfcA2 2945138 2947417 - putative multimodular enzyme similar to Yersinia pestis KIM y1449 gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2657 YP_2658 YP2658 mutT5 mutT5 2947613 2948209 - NTP pyrophosphohydrolases including oxidative damage repair enzymes similar to Yersinia pestis CO92 YPO3035. Contains NUDIX hydrolase (Interpro|IPR000086). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Isopentenyl-diphosphate delta-isomerase (Interpro|IPR002667%2C (GO:0008299)). Contains Conserved hypothetical protein 52 (Interpro|IPR004385) gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2658 YP_2659 YP2659 napC napC 2948394 2949011 - cytochrome C-type protein NapC similar to Yersinia pestis CO92 napC and Yersinia pestis KIM napC. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains NapC/NirT cytochrome c%2C N-terminal (Interpro|IPR005126) gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2659 YP_2660 YP2660 napB napB 2949021 2949422 - cytochrome C-type protein NapB precursor similar to Yersinia pestis CO92 napB and Yersinia pestis KIM napB. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Nitrate reductase cytochrome c-type subunit (NapB) (Interpro|IPR005591) gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2660 YP_2661 YP2661 napA napA 2949571 2952063 - periplasmic nitrate reductase precursor similar to Yersinia pestis CO92 napA. Contains Twin-arginine translocation pathway signal (Interpro|IPR006311). Contains Prokaryotic molybdopterin oxidoreductase (Interpro|IPR006655%2C (GO:0006118)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molydopterin dinucleotide binding domain (Interpro|IPR006657). Contains Molybdopterin oxidoreductase Fe4S4 domain (Interpro|IPR006963) gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2661 YP_2662 YP2662 napD napD 2952060 2952332 - assembly protein for periplasmic nitrate reductase similar to Yersinia pestis CO92 napD and Yersinia pestis KIM napD. Contains NapD protein (Interpro|IPR005623) gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2662 YP_2663 YP2663 napF3 napF3 2952316 2952819 - ferredoxin-type protein NapF similar to Yersinia pestis CO92 napF and Yersinia pestis KIM napF. Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Ferredoxin-type protein NapF (Interpro|IPR004496%2C (GO:0006118)%2C (GO:0008042)) gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2663 YP_2664 YP2664 narP narP 2953619 2954281 + nitrate/nitrite response regulator protein NarP similar to Yersinia pestis CO92 narP and Yersinia pestis KIM narP. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2664 YP_2665 YP2665 YP_2665 2954294 2954572 - hypothetical protein similar to Yersinia pestis CO92 YPO3042 and Yersinia pestis KIM y1440 gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2665 YP_2666 YP2666 acrD acrD 2954861 2958118 + multidrug efflux protein similar to Yersinia pestis CO92 YPO3043 and Yersinia pestis KIM acrD. Contains Acriflavin resistance protein (Interpro|IPR001036). Contains Hydrophobe/amphiphile efflux-1 HAE1 (Interpro|IPR004764%2C (GO:0016021)) gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2666 YP_2667 YP2667 YP_2667 2958349 2958933 + hypothetical protein similar to Yersinia pestis CO92 YPO3044 and Yersinia pestis KIM y1438 gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2667 YP_2668 YP2668 YP_2668 2959222 2959770 + putative membrane protein similar to Yersinia pestis CO92 YPO3045 and Yersinia pestis KIM y1437 gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2668 YP_2669 YP2669 YP_2669 2960524 2960961 - Residue 1 to 87 similar to Yersinia pestis CO92 YPO3047 and KIM y1434 (557 aa%2C probable sulfatase)%3B residue 88 to 145 similar to C-terminus of CO92 YPO3046 (395 aa%2C probable sulfatase modifier protein) and KIM143%3B This CDS seems to be a pseudogene. pseudogene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2669 YP_2670 YP2670 YP_2670 2961439 2962536 - putative ABC-transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO3048 and Yersinia pestis KIM. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2670 YP_2671 YP2671 YP_2671 2962502 2964264 - similar to Yersinia pestis CO92 YPO3049 and Yersinia pestis KIM y1431. There is a frameshift mutation following codon 390. The sequence has been checked and is believed to be correct. pseudogene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2671 YP_2672 YP2672 tbpA2 tbpA2 2964359 2965468 - putative solute-binding periplasmic protein of ABC transporter similar to Yersinia pestis KIM y1430. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2672 YP_2673 YP2673 nrfG4 nrfG4 2965731 2966231 + TPR-repeat-containing proteins similar to Yersinia pestis CO92 YPO3051 and Yersinia pestis KIM y1429. Contains TPR repeat (Interpro|IPR001440) gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2673 YP_2674 YP2674 arsC1 arsC1 2966391 2966789 + Arsenate reductase and related proteins%2C glutaredoxin family similar to Yersinia pestis CO92 YPO3052 and Yersinia pestis KIM y1428. Contains Conserved hypothetical protein%2C ArsC related (Interpro|IPR006504). Contains Arsenate reductase and related (Interpro|IPR006660%2C (GO:0006118)%2C (GO:0016491)) gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2674 YP_2675 YP2675 dapE dapE 2966791 2967918 + succinyl-diaminopimelate desuccinylase similar to Yersinia pestis CO92 dapE and Yersinia pestis KIM dapE. Contains ArgE/dapE/ACY1/CPG2/yscS (Interpro|IPR001261%2C (GO:0006508)%2C (GO:0008237)). Contains Peptidase M20/M25/M40 (Interpro|IPR002933%2C (GO:0006508)%2C (GO:0008237)). Contains Proteobacterial succinyl-diaminopimelate desuccinylase (Interpro|IPR005941%2C (GO:0009089)) gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2675 YP_2676 YP2676 vanY vanY 2967915 2968592 + putative carboxypeptidase similar to Yersinia pestis CO92 YPO3054 and Yersinia pestis KIM y1426. Contains D%2CD-carboxypeptidase VanY (Interpro|IPR003709%2C (GO:0009002)) gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2676 YP_2677 YP2677 YP_2677 2968618 2968854 + putative membrane protein similar to Yersinia pestis CO92 YPO3055 and Yersinia pestis KIM y1425. gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2677 YP_2678 YP2678 YP_2678 2969059 2971158 - putative acetyltransferase similar to Yersinia pestis CO92 YPO3056 and Yersinia pestis KIM y1424. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2678 YP_2679 YP2679 YP_2679 2971160 2971612 - putative membrane protein similar to Yersinia pestis CO92 YPO3057 gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2679 YP_2680 YP2680 YP_2680 2971706 2972572 - putative membrane protein similar to Yersinia pestis CO92 YPO3058 and Yersinia pestis KIM y1422. Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2680 YP_2681 YP2681 purC purC 2972791 2973504 - phosphoribosylaminoimidazole-succinocarboxamide synthase similar to Yersinia pestis CO92 purC and Yersinia pestis KIM purC. Contains SAICAR synthetase (Interpro|IPR001636%2C (GO:0006164)) gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2681 YP_2682 YP2682 tnp_29 tnp_29 2973652 2974161 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2682 YP_2683 YP2683 dapX dapX 2974285 2975346 - lipoprotein similar to Yersinia pestis CO92 dapX and Yersinia pestis KIM nlpB. gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2683 YP_2684 YP2684 dapA2 dapA2 2975361 2976260 - dihydrodipicolinate synthase similar to Yersinia pestis KIM dapA. Contains Dihydrodipicolinate synthetase (Interpro|IPR002220). Contains Dihydrodipicolinate synthase subfamily (Interpro|IPR005263) gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2684 YP_2685 YP2685 gcvR gcvR 2976260 2976976 + Glycine cleavage system regulatory protein Best Blastp hit %3D gi|16123240|ref|NP_406553.1| (NC_003143) glycine cleavage system transcriptional repressor [Yersinia pestis]%2C gi|15981016|emb|CAC92305.1| (AJ414155) glycine cleavage system transcriptional repressor [Yersinia pestis]%2C(len:189 aa)%3B. Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)) gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2685 YP_2686 YP2686 bcp bcp 2976976 2977449 + bacterioferritin comigratory protein similar to Yersinia pestis CO92 bcp and Yersinia pestis KIM bcp. Contains Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (Interpro|IPR000866) gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2686 YP_2687 YP2687 YP_2687 2977693 2978112 - putative exported protein similar to Yersinia pestis CO92 YPO3065 and Yersinia pestis KIM y1416 gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2687 YP_2688 YP2688 YP_2688 2978116 2978811 - hypothetical protein similar to Yersinia pestis CO92 YPO3066 and Yersinia pestis KIM y1415 gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2688 YP_2689 YP2689 YP_2689 2979149 2979322 + hypothetical protein similar to Yersinia pestis CO92 YPO3067 gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2689 YP_2690 YP2690 perM3 perM3 2979411 2980475 - putative membrane protein similar to Yersinia pestis CO92 YPO3068 and Yersinia pestis KIM perM. Contains Vacuolar H+-transporting two-sector ATPase%2C C subunit (Interpro|IPR000245%2C (GO:0016020)). Contains Acriflavin resistance protein (Interpro|IPR001036). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Protein of unknown function UPF0118 (Interpro|IPR002549) gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2690 YP_2691 YP2691 htpX2 htpX2 2980713 2982290 + putative exported protein similar to Yersinia pestis CO92 YPO3069 and Yersinia pestis KIM y1412. Contains Gram-negative bacterial type III secretion SycD chaperone (Interpro|IPR005415%2C (GO:0006950)) gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2691 YP_2692 YP2692 arsC2 arsC2 2982295 2982753 + putative oxidoreductase similar to Yersinia pestis KIM y1411. Contains Arsenate reductase (Interpro|IPR006659%2C (GO:0006118)%2C (GO:0008794)). Contains Arsenate reductase and related (Interpro|IPR006660%2C (GO:0006118)%2C (GO:0016491)) gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2692 YP_2693 YP2693 dnaA1 dnaA1 2982965 2983684 - ATPase involved in DNA replication initiation similar to Yersinia pestis CO92 YPO3071 and Yersinia pestis KIM y1410. Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)) gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2693 YP_2694 YP2694 tnp_30 tnp_30 2983860 2984369 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2694 YP_2695 YP2695 upp upp 2984494 2985153 - uracil phosphoribosyltransferase similar to Yersinia pestis CO92 upp and Yersinia pestis KIM upp. Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Uracil phosphoribosyl transferase (Interpro|IPR005765%2C (GO:0006223)) gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2695 YP_2696 YP2696 purI purI 2985631 2986560 + putative phosphoribosylaminoimidazole synthetase similar to Yersinia pestis CO92 purI and Yersinia pestis KIM purM. Contains AIR synthase related protein (Interpro|IPR000728%2C (GO:0003824)). Contains Phosphoribosylformylglycinamidine cyclo-ligase (Interpro|IPR004733%2C (GO:0006189)) gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2696 YP_2697 YP2697 purN purN 2986675 2987313 + putative phosphoribosylglycinamide formyltransferase similar to Yersinia pestis CO92 purN and Yersinia pestis KIM purN. Contains Phosphoribosylglycinamide formyltransferase%2C active site (Interpro|IPR001555). Contains Formyl transferase%2C N-terminal (Interpro|IPR002376%2C (GO:0009058)%2C (GO:0016742)). Contains Phosphoribosylglycinamide formyltransferase (Interpro|IPR004607%2C (GO:0006189)) gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2697 YP_2698 YP2698 speG speG 2987542 2988087 + spermidine acetyltransferase similar to Yersinia pestis CO92 speG and Yersinia pestis KIM speG. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2698 YP_2699 YP2699 fliB fliB 2988181 2989370 - similar to gi|16765296|ref|NP_460911.1| N-methylation of lysine residues in flagellin [Salmonella typhimurium LT2](401 aa). There is a frameshift after codon 116. The sequence has been checked and is believed to be correct. pseudogene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2699 YP_2700 YP2700 pstB1 pstB1 2989626 2990438 - putative phosphate transport ATP-binding protein similar to Yersinia pestis CO92 pstb and Yersinia pestis KIM pstB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2700 YP_2701 YP2701 pstA1 pstA1 2990466 2992166 - putative phosphate transport system permease similar to Yersinia pestis CO92 pstA and Yersinia pestis KIM y1400. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Phosphate transport system permease protein 2 (Interpro|IPR005672%2C (GO:0019866)) gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2701 YP_2702 YP2702 pstC1 pstC1 2992163 2994412 - putative phosphate transport system permease similar to Yersinia pestis CO92 pstC and Yersinia pestis KIM y1399. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Vacuolar H+-transporting two-sector ATPase%2C C subunit (Interpro|IPR000245%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Phosphate transport system permease protein 1 (Interpro|IPR005670%2C (GO:0019866)) gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2702 YP_2703 YP2703 ppk ppk 2994578 2996728 + polyphosphate kinase similar to Yersinia pestis KIM ppk. Contains Phospholipase D/Transphosphatidylase (Interpro|IPR001736%2C (GO:0008152)). Contains Polyphosphate kinase (Interpro|IPR003414%2C (GO:0006799)%2C (GO:0009358)) gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2703 YP_2704 YP2704 ppx ppx 2996739 2998298 + putative exopolyphosphatase similar to Yersinia pestis CO92 ppx and Yersinia pestis KIM ppx. Contains Ppx/GppA phosphatase (Interpro|IPR003695%2C (GO:0016302)) gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2704 YP_2706 YP2706 mgtE mgtE 2998674 3000149 + putative divalent cation transport protein similar to Yersinia pestis CO92 mgtE and Yersinia pestis KIM y1395. Contains CBS domain (Interpro|IPR000644). Contains MgtE integral membrane region (Interpro|IPR006667%2C (GO:0006812)%2C (GO:0008324)). Contains MgtE intracellular region (Interpro|IPR006668%2C (GO:0006812)%2C (GO:0008324)). Contains Divalent cation transporter (Interpro|IPR006669%2C (GO:0006812)%2C (GO:0008324)) gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2706 YP_2707 YP2707 dnaK1 dnaK1 3000286 3001641 + putative heat shock protein similar to Yersinia pestis CO92 YPO2840 and Yersinia pestis KIM y1394. Contains Heat shock protein Hsp70 (Interpro|IPR001023) gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2707 YP_2708 YP2708 potC2 potC2 3001913 3002776 - putative ABC transporter permease similar to Yersinia pestis CO92 YPO2841 and Yersinia pestis KIM y1393. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2708 YP_2709 YP2709 potB2 potB2 3002823 3004169 - putative ABC transporter permease similar to Yersinia pestis CO92 YPO2842 and Yersinia pestis KIM y1392. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2709 YP_2710 YP2710 potD potD 3004135 3005163 - putative transport system periplasmic protein similar to Yersinia pestis CO92 YPO2843 and Yersinia pestis KIM y1391. Contains Bacterial periplasmic spermidine/putrescine-binding protein (Interpro|IPR001188%2C (GO:0030288)) gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2710 YP_2711 YP2711 goaG goaG 3005216 3006529 - 4-aminobutyrate aminotransferase similar to Yersinia pestis KIM goaG. Contains Heat shock protein DnaJ%2C N-terminal (Interpro|IPR001623). Contains Bacterial 4-aminobutyrate aminotransferase (Interpro|IPR004632%2C (GO:0009448)). Contains Aminotransferase class-III (Interpro|IPR005814%2C (GO:0008483)) gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2711 YP_2712 YP2712 aRO83 aRO83 3006687 3008192 + putative GntR-family regulatory protein similar to Yersinia pestis CO92 YPO2845 and Yersinia pestis KIM y1389. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)) gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2712 YP_2713 YP2713 YP_2713 3008566 3009660 + putative ABC-transporter ATP-binding protein similar to Yersinia pestis CO92 YPO2846 and Yersinia pestis KIM y1388. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Spermidine/putrescine ABC transporter ATP-binding subunit (Interpro|IPR005893%2C (GO:0016020)) gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2713 YP_2714 YP2714 acrA8 acrA8 3010024 3011358 + putative HlyD family secretion protein similar to Yersinia pestis CO92 YPO2847 and Yersinia pestis KIM y1386. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2714 YP_2715 YP2715 acrB3 acrB3 3011358 3014516 + AcrB/AcrD/AcrF family membrane protein similar to Yersinia pestis CO92 YPO2848 and Yersinia pestis KIM y1385. Contains Thymidylate kinase (Interpro|IPR000062%2C (GO:0006235)). Contains Acriflavin resistance protein (Interpro|IPR001036) gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2715 YP_2716 YP2716 acrB4 acrB4 3014513 3017587 + AcrB/AcrD/AcrF family membrane protein similar to Yersinia pestis CO92 YPO2849 and Yersinia pestis KIM y1384. Contains Acriflavin resistance protein (Interpro|IPR001036) gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2716 YP_2717 YP2717 yegB yegB 3017621 3019018 + putative membrane protein similar to Yersinia pestis CO92 yegB and Yersinia pestis KIM y1383. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2717 YP_2718 YP2718 baeS8 baeS8 3019103 3020434 + Signal transduction histidine kinase Best Blastp hit %3D gi|16765460|ref|NP_461075.1| (NC_003197) sensory kinase in two-component regulatoyr system wtih BaeR [Salmonella typhimurium LT2]%2C gi|16420664|gb|AAL21034.1| (AE008794) sensory kinase in two-component regulatoyr system wtih BaeR [Salmonella typhimurium LT2]%2C(len:467 aa)%3B. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2718 YP_2719 YP2719 ompR3 ompR3 3020444 3021163 + transcriptional response regulatory protein (sensor BaeS) similar to Yersinia pestis KIM baeR. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2719 YP_2720 YP2720 YP_2720 3021255 3021638 + hypothetical protein similar to Yersinia pestis CO92 YPO2854 and Yersinia pestis KIM y1380. gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2720 YP_2721 YP2721 YP_2721 3021913 3023307 + putative protease similar to Yersinia pestis CO92 YPO2855 and Yersinia pestis KIM y1379. Contains Peptidase U32 (Interpro|IPR001539%2C (GO:0006508)%2C (GO:0008233)) gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2721 YP_2722 YP2722 bmrU bmrU 3023943 3024833 + putative diacylglycerol kinase similar to Yersinia pestis CO92 YPO2856 and Yersinia pestis KIM y1378. Contains Diacylglycerol kinase%2C catalytic domain (Interpro|IPR001206%2C (GO:0007205)). Contains Conserved hypothetical protein 147 (Interpro|IPR005218) gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2722 YP_2723 YP2723 YP_2723 3025120 3025629 - hypothetical protein similar to Yersinia pestis KIM y1376 gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2723 YP_2724 YP2724 YP_2724 3025860 3026747 + hypothetical protein similar to Yersinia pestis CO92 YPO2858 and Yersinia pestis KIM y1374. gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2724 YP_2725 YP2725 thiD thiD 3026809 3027609 - putative phosphomethylpyrimidine kinase similar to Yersinia pestis CO92 thiD and Yersinia pestis KIM thiD. Contains Phosphomethylpyrimidine kinase (Interpro|IPR004399%2C (GO:0009228)) gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2725 YP_2726 YP2726 YP_2726 3028119 3028598 + putative membrane protein similar to Yersinia pestis CO92 YPO2860 and Yersinia pestis KIM y1372. gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2726 YP_2727 YP2727 YP_2727 3028657 3028935 + len: 92 aa%3B Best Blastp hit %3D gi|16124214|ref|NP_407527.1| (NC_003143) hypothetical protein [Yersinia pestis]%2C gi|22127988|ref|NP_671411.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|15981995|emb|CAC93555.1| (AJ414160) hypothetical protein [Yersinia pestis]%2C gi|21961134|gb|AAM87662.1|AE014013_7 (AE014013) hypothetical [Yersinia pestis KIM]%2C(len:206 aa)%3B the stop codon of this CDS locates in the IS285 element%2Cpossible pseudogene. pseudogene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2727 YP_2728 YP2728 YP_2728 3028947 3030155 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2728 YP_2729 YP2729 proP27 proP27 3030340 3030861 + putative membrane protein similar to Yersinia pestis CO92 YPO2863. gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2729 YP_2730 YP2730 YP_2730 3030960 3031253 + hypothetical protein Best Blastp hit %3D gi|16123056|ref|NP_406369.1| (NC_003143) putative membrane protein [Yersinia pestis]%2C gi|22125268|ref|NP_668691.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|15980831|emb|CAC92115.1| (AJ414154) putative membrane protein [Yersinia pestis]%2C gi|21958140|gb|AAM84942.1|AE013739_8 (AE013739) hypothetical [Yersinia pestis KIM]%2C(len:131 aa) gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2730 YP_2731 YP2731 YP_2731 3031656 3032051 + putative membrane protein similar to Yersinia pestis CO92 YPO2865 and Yersinia pestis KIM y1368 gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2731 YP_2732 YP2732 YP_2732 3032089 3032508 + putative membrane protein similar to Yersinia pestis CO92 YPO2866 and Yersinia pestis KIM y1367. gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2732 YP_2734 YP2734 hcp6 hcp6 3032994 3033473 + Hemolysin-coregulated protein (uncharacterized) similar to Yersinia pestis CO92 YPO2868 and Yersinia pestis KIM y1365 gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2734 YP_2735 YP2735 tnp_31 tnp_31 3033633 3034142 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2735 YP_2736 YP2736 guaA guaA 3034466 3036043 - putative GMP synthase similar to Yersinia pestis CO92 guaA and Yersinia pestis KIM guaA. Contains Glutamine amidotransferase class-I (Interpro|IPR000991%2C (GO:0003824)). Contains Carbamoyl-phosphate synthase%2C GATase domain (Interpro|IPR001317). Contains GMP synthase%2C C terminal (Interpro|IPR001674%2C (GO:0006177)). Contains GMP synthase%2C N-terminal (Interpro|IPR004739%2C (GO:0006177)). Contains Anthranilate synthase component II/delta crystallin (Interpro|IPR006220) gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2736 YP_2737 YP2737 guaB guaB 3036223 3037770 - inosine-5'-monophosphate dehydrogenase similar to Yersinia pestis CO92 guaB and Yersinia pestis KIM guaB. Contains CBS domain (Interpro|IPR000644). Contains IMP dehydrogenase/GMP reductase (Interpro|IPR001093%2C (GO:0003824)). Contains FMN/related compound-binding core (Interpro|IPR003009). Contains IMP dehydrogenase (Interpro|IPR005990%2C (GO:0006177)) gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2737 YP_2738 YP2738 xseA xseA 3037856 3039235 + exodeoxyribonuclease VII large subunit similar to Yersinia pestis CO92 xseA and Yersinia pestis KIM xseA. Contains Exonuclease VII%2C large subunit (Interpro|IPR003753%2C (GO:0006308)%2C (GO:0009318)). Contains OB-fold nucleic acid binding domain (Interpro|IPR004365%2C (GO:0003676)) gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2738 YP_2739 YP2739 YP_2739 3039344 3039568 - hypothetical protein similar to Yersinia pestis CO92 YPO2873 and Yersinia pestis KIM y1359. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)) gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2739 YP_2740 YP2740 YP_2740 3039617 3040573 - putative membrane protein similar to Yersinia pestis CO92 YPO2874 and Yersinia pestis KIM y1358. Contains Auxin Efflux Carrier (Interpro|IPR004776%2C (GO:0016021)) gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2740 YP_2741 YP2741 YP_2741 3040920 3042407 - putative GTP-binding protein similar to Yersinia pestis CO92 YPO2875 and Yersinia pestis KIM y1357. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains GTP-binding protein%2C HSR1-related (Interpro|IPR002917). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains GTP-binding domain (Interpro|IPR005289). Contains GTP1/OBG family (Interpro|IPR006073) gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2741 YP_2742 YP2742 YP_2742 3042555 3043736 - putative lipoprotein similar to Yersinia pestis CO92 YPO2876 and Yersinia pestis KIM y1356. Contains Bacterial quinoprotein (Interpro|IPR002372%2C (GO:0006118)) gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2742 YP_2743 YP2743 YP_2743 3043748 3044383 - putative membrane protein similar to Yersinia pestis CO92 YPO2877 and Yersinia pestis KIM y1355. gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2743 YP_2744 YP2744 hisS hisS 3044397 3045671 - histidyl-tRNA synthetase similar to Yersinia pestis CO92 hisS and Yersinia pestis KIM hisS. Contains tRNA synthetases%2C class-II (G%2C H%2C P and S) (Interpro|IPR002314%2C (GO:0006418)). Contains Anticodon binding domain (Interpro|IPR004154%2C (GO:0006412)). Contains Histidyl-tRNA synthetase%2C class IIa (Interpro|IPR004516%2C (GO:0006427)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2744 YP_2745 YP2745 gcpE gcpE 3045880 3047007 - putative acetyltransferase similar to Yersinia pestis CO92 aarC and Yersinia pestis KIM gcpE. Contains IspG protein (Interpro|IPR004588%2C (GO:0016114)). Contains GcpE protein (Interpro|IPR006705%2C (GO:0016114)) gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2745 YP_2746 YP2746 YP_2746 3047069 3048106 - putative DNA-binding protein similar to Yersinia pestis CO92 YPO2880 and Yersinia pestis KIM y1352. Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)) gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2746 YP_2747 YP2747 pilF pilF 3048096 3048845 - putative fimbrial biogenesis protein similar to Yersinia pestis CO92 YPO2881 and Yersinia pestis KIM y1351. Contains TPR repeat (Interpro|IPR001440) gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2747 YP_2748 YP2748 YP_2748 3048999 3050195 - putative Fe-S-cluster redox enzyme similar to Yersinia pestis CO92 YPO2882 and Yersinia pestis KIM y1350. Contains Conserved hypothetical protein 48 (Interpro|IPR004383%2C (GO:0005554)) gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2748 YP_2749 YP2749 ndk ndk 3050457 3050885 - nucleoside diphosphate kinase similar to Yersinia pestis CO92 ndk and Yersinia pestis KIM ndk. Contains Nucleoside diphosphate kinase (Interpro|IPR001564%2C (GO:0006241)) gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2749 YP_2750 YP2750 YP_2750 3051212 3053632 - putative exported protein similar to Yersinia pestis CO92 YPO2884 and Yersinia pestis KIM y1348. Contains Beta and gamma crystallin (Interpro|IPR001064) gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2750 YP_2752 YP2752 yapA yapA 3054348 3058832 + putative autotransporter protein similar to Yersinia pestis CO92 yapA and Yersinia pestis KIM yapA. Contains Pertactin virulence factor%2C C-terminal (Interpro|IPR003991%2C (GO:0007155)). Contains Pertactin domain (Interpro|IPR004899). Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2752 YP_2753 YP2753 yapB4 yapB4 3059390 3060079 + C-terminal of putative autotransporter YapB in Y.pestis CO92%2C the length of entire CDS is 3510%3B yapB is a pseudo gene due to a framshif%3B this CDS has been disrputed by IS285%2C and N-terminal located in 2843874 to 2841049%2C which possesses the same framshift. The rearrangement has been confirmed. pseudogene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2753 YP_2754 YP2754 YP_2754 3060117 3061325 - transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2754 YP_2755 YP2755 YP_2755 3061395 3062540 + similar to N-terminal of many outer membrane usher protein%2C such as gi|15599279|ref|NP_252773.1| probable fimbrial biogenesis usher protein [Pseudomonas aeruginosa PA01(844 aa)%3B and to gi|15836686|ref|NP_297374.1| outer membrane usher protein precursor [Xylella fastidiosa 9a5c](901 aa). This CDS has been disrupted by IS285 element and the C-terminal locates in 2845176 to 2846765(complement). The reaarangement has been confirmed. pseudogene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2755 YP_2756 YP2756 fimA5 fimA5 3062525 3063133 + putative fimbrial protein similar to Yersinia pestis KIM y1544. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2756 YP_2757 YP2757 YP_2757 3063217 3063762 + hypothetical protein similar to Yersinia pestis CO92 YPO2939 and Yersinia pestis KIM y1545. gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2757 YP_2758 YP2758 YP_2758 3063765 3065288 + hypothetical protein similar to Yersinia pestis CO92 YPO2938 and Yersinia pestis KIM y1546. gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2758 YP_2759 YP2759 YP_2759 3065530 3066099 + hypothetical protein similar to Yersinia pestis KIM y1547 gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2759 YP_2760 YP2760 YP_2760 3066313 3066912 + putative exported protein similar to Yersinia pestis CO92 YPO2935 and Yersinia pestis KIM y1548. gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2760 YP_2761 YP2761 YP_2761 3066916 3068265 + hypothetical protein similar to Yersinia pestis CO92 YPO2934 and Yersinia pestis KIM y1549. gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2761 YP_2762 YP2762 YP_2762 3068262 3068858 + similar to putative outer membrane protein OmpA family [Salmonella typhimurium LT2]%2C gi|15130931|emb|CAC48213.1|(len:434 aa)%3B this CDS has been disrupted by IS100 element. pseudogene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2762 YP_2763 YP2763 YP_2763 3068944 3069966 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2763 YP_2764 YP2764 dnaC_21 dnaC_21 3069963 3070745 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2764 YP_2765 YP2765 YP_2765 3070796 3071035 - similar to Yersinia pestis KIM y3092. The putative stop codon of ths CDS locates in IS100 element%2C so it might be a pseuogene. pseudogene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2765 YP_2766 YP2766 fUI1 fUI1 3071341 3072852 + putative permease similar to Yersinia pestis CO92 YPO1083 and Yersinia pestis KIM y3093. Contains Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin (Interpro|IPR001248%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2766 YP_2767 YP2767 dnaQ dnaQ 3073098 3073862 - DNA polymerase III%2C epsilon chain similar to Yersinia pestis CO92 dnaQ and Yersinia pestis KIM dnaQ. Contains DNA polymerase III%2C epsilon subunit (Interpro|IPR006054%2C (GO:0006260)). Contains Exonuclease (Interpro|IPR006055%2C (GO:0005622)). Contains DNA polymerase 3%2C epsilon subunit (Interpro|IPR006309) gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2767 YP_2768 YP2768 rnhA rnhA 3073932 3074396 + ribonuclease HI similar to Yersinia pestis CO92 rnhA and Yersinia pestis KIM rnhA. Contains RNase H (Interpro|IPR002156%2C (GO:0004523)) gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2768 YP_2769 YP2769 smtA8 smtA8 3074451 3075170 - SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO1080 and Yersinia pestis KIM y3096 gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2769 YP_2770 YP2770 gloB3 gloB3 3075128 3075970 + putative hydroxyacylglutathione hydrolase similar to Yersinia pestis KIM gloB. Contains Beta-lactamase-like (Interpro|IPR001279) gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2770 YP_2771 YP2771 mltD mltD 3075979 3077430 + membrane-bound lytic murein transglycosylase D precursor similar to Yersinia pestis CO92 mltD and Yersinia pestis KIM dniR. Contains SLT domain (Interpro|IPR000189). Contains Peptidoglycan-binding LysM (Interpro|IPR002482%2C (GO:0016998)) gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2771 YP_2772 YP2772 YP_2772 3077473 3078255 - hypothetical protein similar to Yersinia pestis CO92 YPO1077 and Yersinia pestis KIM y3099. Contains Endonuclease/Exonuclease/phosphatase family (Interpro|IPR005135) gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2772 YP_2773 YP2773 YP_2773 3078619 3079083 - hypothetical protein similar to Yersinia pestis CO92 YPO1076 and Yersinia pestis KIM y3100. gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2773 YP_2774 YP2774 aRA13 aRA13 3079118 3079921 - putative aldo/keto reductase similar to Yersinia pestis CO92 YPO1075 and Yersinia pestis KIM y3101. Contains Aldo/keto reductase (Interpro|IPR001395) gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2774 YP_2775 YP2775 hisB2 hisB2 3086062 3086628 - Histidinol phosphatase and related phosphatases similar to Yersinia pestis CO92 YPO1074 and Yersinia pestis KIM y3103. Contains Histidinol phosphatase-related protein (Interpro|IPR004446%2C (GO:0005554)). Contains Histidinol-phosphate phosphatase (Interpro|IPR006543). Contains HAD-superfamily hydrolase%2C IIIA domain (Interpro|IPR006549) gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2775 YP_2776 YP2776 abc2 abc2 3086815 3087846 + ABC transporter ATP-binding protein similar to Yersinia pestis CO92 abc and Yersinia pestis KIM abc. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2776 YP_2777 YP2777 YP_2777 3087839 3088492 + ABC transporter permease protein similar to Yersinia pestis CO92 YPO1072 and Yersinia pestis KIM y3105. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2777 YP_2778 YP2778 nlpA2 nlpA2 3088556 3089371 + putative lipoprotein similar to Yersinia pestis CO92 YPO1071 and Yersinia pestis KIM y3106. Contains Lipoprotein YaeC family (Interpro|IPR004478). Contains NLPA lipoprotein (Interpro|IPR004872) gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2778 YP_2779 YP2779 rcsF rcsF 3089489 3089896 + putative lipoprotein similar to Yersinia pestis CO92 rcsF and Yersinia pestis KIM rcsF. Contains Glutelin (Interpro|IPR000480%2C (GO:0045735)) gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2779 YP_2780 YP2780 YP_2780 3089893 3090600 + hypothetical protein similar to Yersinia pestis CO92 YPO1069 and Yersinia pestis KIM y3108. Contains Protein of unknown function%2C UPF0066 (Interpro|IPR001378%2C (GO:0005554)) gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2780 YP_2781 YP2781 proS proS 3090704 3092422 + prolyl-tRNA synthetase similar to Yersinia pestis CO92 proS and Yersinia pestis KIM proS. Contains tRNA synthetases%2C class-II (G%2C H%2C P and S) (Interpro|IPR002314%2C (GO:0006418)). Contains Prolyl-tRNA synthetase%2C class IIa (Interpro|IPR002316%2C (GO:0006433)). Contains Anticodon binding domain (Interpro|IPR004154%2C (GO:0006412)). Contains Prolyl-tRNA synthetase%2C bacterial (Interpro|IPR004500%2C (GO:0006412)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2781 YP_2782 YP2782 cutF cutF 3092556 3093284 - putative copper homeostasis lipoprotein similar to Yersinia pestis CO92 cutF and Yersinia pestis KIM cutF gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2782 YP_2783 YP2783 prfB1 prfB1 3093324 3093764 - Protein chain release factor B similar to Yersinia pestis KIM y3111. Contains Class I peptide chain release factor domain (Interpro|IPR000352%2C (GO:0006415)) gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2783 YP_2784 YP2784 YP_2784 3093743 3094357 - hypothetical protein similar to Yersinia pestis KIM y3112 gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2784 YP_2785 YP2785 YP_2785 3094533 3094733 + hypothetical protein similar to Yersinia pestis CO92 YPO1064a and Yersinia pestis KIM y3113. gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2785 YP_2786 YP2786 YP_2786 3094720 3094980 + hypothetical protein similar to Yersinia pestis CO92 YPO1064 and Yersinia pestis KIM y3115 gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2786 YP_2787 YP2787 YP_2787 3095245 3095562 - putative cytochrome similar to Yersinia pestis CO92 YPO1063 and Yersinia pestis KIM y3116. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Cytochrome c%2C class IC (Interpro|IPR002329%2C (GO:0006118)). Contains Cytochrome c%2C class I (Interpro|IPR003088%2C (GO:0006118)) gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2787 YP_2788 YP2788 mesJ2 mesJ2 3095799 3097181 - putative ATPase of the PP-loop superfamily implicated in cell cycle control similar to Yersinia pestis CO92 YPO1062 and Yersinia pestis KIM mesJ. Contains Protein of unknown function UPF0021 (Interpro|IPR000541%2C (GO:0005554)) gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2788 YP_2789 YP2789 gloA2 gloA2 3097183 3097581 - Lactoylglutathione lyase and related lyases similar to Yersinia pestis CO92 YPO1061 and Yersinia pestis KIM y3118. Contains Glyoxalase/Bleomycin resistance protein/dioxygenase domain (Interpro|IPR004360) gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2789 YP_2790 YP2790 accA accA 3097765 3098724 - acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha similar to Yersinia pestis CO92 accA and Yersinia pestis KIM accA. Contains Acetyl-CoA carboxylase%2C alpha subunit (Interpro|IPR001095%2C (GO:0009317)) gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2790 YP_2791 YP2791 dnaE dnaE 3098737 3102252 - DNA polymerase III%2C alpha chain similar to Yersinia pestis CO92 dnaE and Yersinia pestis KIM dnaE. Contains Phosphoesterase PHP%2C N-terminal (Interpro|IPR003141%2C (GO:0006260)). Contains PHP domain C-terminal region (Interpro|IPR004013). Contains OB-fold nucleic acid binding domain (Interpro|IPR004365%2C (GO:0003676)). Contains DNA polymerase III alpha subunit (Interpro|IPR004805%2C (GO:0008408)) gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2791 YP_2792 YP2792 rnhB rnhB 3102382 3102978 - ribonuclease HII similar to Yersinia pestis CO92 rnhB and Yersinia pestis KIM rnhB. Contains Ribonuclease HII/HIII (Interpro|IPR001352%2C (GO:0004523)) gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2792 YP_2793 YP2793 lpxB lpxB 3102975 3104159 - lipid-A-disaccharide synthase similar to Yersinia pestis CO92 lpxB and Yersinia pestis KIM lpxB. Contains Glycosyl transferase%2C family 19 (Interpro|IPR003835%2C (GO:0009245)) gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2793 YP_2794 YP2794 lpxA lpxA 3104163 3104951 - acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam ine O-acyltransferase similar to Yersinia pestis CO92 lpxA and Yersinia pestis KIM lpxA. Contains Bacterial transferase hexapeptide repeat (Interpro|IPR001451) gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2794 YP_2795 YP2795 fabZ2 fabZ2 3104955 3105485 - (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase similar to Yersinia pestis CO92 fabZ and Yersinia pestis KIM fabZ. Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824)). Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824)) gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2795 YP_2796 YP2796 lpxD lpxD 3105643 3106665 - UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase similar to Yersinia pestis CO92 lpxD and Yersinia pestis KIM lpxD. Contains Bacterial transferase hexapeptide repeat (Interpro|IPR001451) gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2796 YP_2797 YP2797 hlpA hlpA 3106669 3107259 - cationic 19 kDa outer membrane protein precursor similar to Yersinia pestis CO92 ompH and Yersinia pestis KIM ompH. Contains Outer membrane protein (OmpH-like) (Interpro|IPR005632) gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2797 YP_2798 YP2798 YP_2798 3107324 3109711 - putative surface antigen similar to Yersinia pestis CO92 YPO1052 and Yersinia pestis KIM y3127. Contains Bacterial surface antigen (D15) (Interpro|IPR000184) gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2798 YP_2799 YP2799 YP_2799 3109748 3111103 - putative membrane protein similar to Yersinia pestis CO92 YPO1051 and Yersinia pestis KIM y3128. Contains Mammalian sterol-regulatory element binding protein (SREBP) site 2 protease (Interpro|IPR001193%2C (GO:0016020)). Contains PDZ/DHR/GLGF domain (Interpro|IPR001478%2C (GO:0007242)). Contains Zinc metalloprotease (putative%2C membrane-associated) (Interpro|IPR004387). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2799 YP_2800 YP2800 cdsA2 cdsA2 3111132 3111980 - phosphatidate cytidylyltransferase similar to Yersinia pestis CO92 cdsA and Yersinia pestis KIM cdsA. Contains Phosphatidate cytidylyltransferase (Interpro|IPR000374%2C (GO:0016020)). Contains Polycystic kidney disease type 1 protein (Interpro|IPR000434) gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2800 YP_2801 YP2801 uppS uppS 3111990 3112748 - undecaprenyl pyrophosphate synthetase similar to Yersinia pestis CO92 uppS and Yersinia pestis KIM y3130. Contains Di-trans-poly-cis-decaprenylcistransferase (Interpro|IPR001441%2C (GO:0008152)%2C (GO:0016740)) gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2801 YP_2802 YP2802 dxr dxr 3112972 3114117 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase similar to Yersinia pestis CO92 dxr and Yersinia pestis KIM y3131. Contains 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Interpro|IPR003821%2C (GO:0008299)) gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2802 YP_2804 YP2804 frr frr 3114382 3114939 - ribosome recycling factor similar to Yersinia pestis CO92 frr and Yersinia pestis KIM frr. Contains Ribosome recycling factor (Interpro|IPR002661%2C (GO:0006412)) gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2804 YP_2805 YP2805 pyrH pyrH 3115075 3115800 - uridylate kinase similar to Yersinia pestis CO92 pyrH and Yersinia pestis KIM pyrH. Contains Phosphofructokinase (Interpro|IPR000023%2C (GO:0006096)). Contains Aspartate/glutamate/uridylate kinase (Interpro|IPR001048%2C (GO:0008652)). Contains Glutamate 5-kinase (Interpro|IPR001057%2C (GO:0006561)) gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2805 YP_2806 YP2806 tsf tsf 3116009 3116866 - elongation factor Ts similar to Yersinia pestis CO92 tsf and Yersinia pestis KIM tsf. Contains Ubiquitin-associated domain (Interpro|IPR000449). Contains Elongation factor Ts (Interpro|IPR001816%2C (GO:0006414)) gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2806 YP_2807 YP2807 rpsB rpsB 3116994 3117803 - 30S ribosomal protein S2 similar to Yersinia pestis CO92 rpsB and Yersinia pestis KIM rpsB. Contains Ribosomal protein S2 (Interpro|IPR001865%2C (GO:0006412)). Contains Ribosomal protein S2%2C bacterial and organelle form (Interpro|IPR005706%2C (GO:0015935)) gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2807 YP_2808 YP2808 ampM ampM 3118154 3118945 + methionine aminopeptidase similar to Yersinia pestis CO92 ampM and Yersinia pestis KIM map. Contains Metallopeptidase family M24 (Interpro|IPR000994%2C (GO:0006508)%2C (GO:0008235)). Contains Methionine aminopeptidase (Interpro|IPR001714%2C (GO:0006508)). Contains Methionine aminopeptidase%2C subfamily 1 (Interpro|IPR002467%2C (GO:0006508)) gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2808 YP_2809 YP2809 glnD glnD 3118948 3121686 + [protein-PII] uridylyltransferase similar to Yersinia pestis CO92 glnD and Yersinia pestis KIM glnD. Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains DNA polymerase%2C beta-like region (Interpro|IPR002934). Contains Metal dependent phosphohydrolase%2C HD region (Interpro|IPR003607%2C (GO:0003824)). Contains Metal-dependent phosphohydrolase%2C HD region (Interpro|IPR006674) gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2809 YP_2810 YP2810 dapD dapD 3121816 3122685 + 2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase similar to Yersinia pestis KIM dapD. Contains Bacterial transferase hexapeptide repeat (Interpro|IPR001451). Contains 2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase (Interpro|IPR005664%2C (GO:0009089)%2C (GO:0016757)) gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2810 YP_2811 YP2811 smc2 smc2 3122809 3123198 + Chromosome segregation ATPases similar to Yersinia pestis CO92 YPO1040 and Yersinia pestis KIM y3141 gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2811 YP_2812 YP2812 fldA3 fldA3 3123288 3123737 - Flavodoxins similar to Yersinia pestis CO92 YPO1039 and Yersinia pestis KIM y3142. Contains Flavodoxin-like domain (Interpro|IPR001094%2C (GO:0006118)%2C (GO:0008246)). Contains Flavodoxin (Interpro|IPR001226%2C (GO:0006118)%2C (GO:0009457)) gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2812 YP_2813 YP2813 rluA2 rluA2 3123765 3124538 - Pseudouridylate synthases%2C 23S RNA-specific similar to Yersinia pestis CO92 YPO1038 and Yersinia pestis KIM y3143. Contains Pseudouridine synthase (Interpro|IPR006145). Contains Pseudouridine synthase%2C Rlu (Interpro|IPR006224%2C (GO:0004730)) gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2813 YP_2814 YP2814 YP_2814 3124538 3125008 - hypothetical protein similar to Yersinia pestis KIM y3144. gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2814 YP_2815 YP2815 tnp_32 tnp_32 3125124 3125633 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2815 YP_2816 YP2816 syd syd 3126272 3126823 - syd protein similar to Yersinia pestis KIM syd gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2816 YP_2817 YP2817 YP_2817 3126955 3127800 + Enzyme related to GTP cyclohydrolase I similar to Yersinia pestis CO92 YPO1034 and Yersinia pestis KIM y3147. Contains GTP cyclohydrolase I (Interpro|IPR001474%2C (GO:0009058)) gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2817 YP_2818 YP2818 YP_2818 3127953 3129317 + putative Rossmann fold nucleotide-binding protein similar to Yersinia pestis CO92 YPO1033 and Yersinia pestis KIM y3148. Contains Conserved hypothetical protein 730 (Interpro|IPR005269) gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2818 YP_2819 YP2819 xni xni 3129577 3130332 + exodeoxyribonuclease IX similar to Yersinia pestis CO92 xni and Yersinia pestis KIM exo. Contains 5'3'-Exonuclease N- and I-domain (Interpro|IPR000513%2C (GO:0004518)). Contains 5'-3' exonuclease (Interpro|IPR002421%2C (GO:0008409)). Contains Helix-hairpin-helix DNA-binding%2C class 2 (Interpro|IPR003584%2C (GO:0005622)) gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2819 YP_2820 YP2820 YP_2820 3130583 3131689 - putative SAM-dependent methyltransferase similar to Yersinia pestis CO92 YPO1031 and Yersinia pestis KIM y3152 gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2820 YP_2821 YP2821 YP_2821 3131682 3132101 - Uncharacterized small membrane protein similar to Yersinia pestis CO92 YPO1030 and Yersinia pestis KIM y3153. Contains Protein of unknown function DUF423 (Interpro|IPR006696) gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2821 YP_2822 YP2822 gcvA gcvA 3132243 3133160 - glycine cleavage system transcriptional activator similar to Yersinia pestis CO92 gcvA and Yersinia pestis KIM gcvA. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2822 YP_2823 YP2823 csdB2 csdB2 3133751 3135025 + putative aminotransferase class V similar to Yersinia pestis CO92 YPO1028 and Yersinia pestis KIM y3156. Contains Aminotransferase%2C class V (Interpro|IPR000192%2C (GO:0008152)%2C (GO:0008483)) gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2823 YP_2824 YP2824 YP_2824 3135160 3135603 + SufE protein similar to Yersinia pestis CO92 YPO1027 and Yersinia pestis KIM y3157. Contains Protein of unknown function UPF0050 (Interpro|IPR003808)%3B probably involved in Fe-S center assembly gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2824 YP_2825 YP2825 YP_2825 3135639 3136466 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 similar to Yersinia pestis CO92 YPO1026 and Yersinia pestis KIM y3158. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains NAD binding site (Interpro|IPR000205). Contains UBA/THIF-type NAD/FAD binding fold (Interpro|IPR000594%2C (GO:0003824)). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)) gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2825 YP_2826 YP2826 mltA mltA 3136609 3137781 - membrane-bound lytic murein transglycosylase A precursor similar to Yersinia pestis CO92 YPO1025 and Yersinia pestis KIM mltA. Contains MltA family (Interpro|IPR005300%2C (GO:0004553)) gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2826 YP_2827 YP2827 amiC amiC 3138503 3139771 - N-acetylmuramoyl-L-alanine amidase AmiC precursor similar to Yersinia pestis CO92 YPO1023 and Yersinia pestis KIM y3161. Contains Cell wall hydrolase/autolysin (Interpro|IPR002508%2C (GO:0009253)) gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2827 YP_2828 YP2828 argA argA 3139989 3141338 + amino-acid acetyltransferase similar to Yersinia pestis CO92 argA and Yersinia pestis KIM argA. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)). Contains Aspartate/glutamate/uridylate kinase (Interpro|IPR001048%2C (GO:0008652)) gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2828 YP_2829 YP2829 YP_2829 3141365 3142387 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2829 YP_2830 YP2830 dnaC_22 dnaC_22 3142384 3143166 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2830 YP_2831 YP2831 YP_2831 3143232 3143342 - similar to C-treminal of transposase for IS1541 (gi|22124562|ref|NP_667985.1| Yersinia pestis KIM)%3B this CDS has been disrupted by IS100 element. pseudogene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2831 YP_2832 YP2832 YP_2832 3143511 3146624 - putative exported protein similar to Yersinia pestis CO92 YPO0824 and Yersinia pestis KIM y3211. Contains Polysaccharide lyase family 8%2C N-terminal (Interpro|IPR003159%2C Cellular Component: extracellular (GO:0005576)%2C (GO:0016829)) gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2832 YP_2833 YP2833 YP_2833 3146694 3148895 - putative exported protein similar to Yersinia pestis CO92 YPO0823 and Yersinia pestis KIM y3210. Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2833 YP_2834 YP2834 YP_2834 3148995 3149945 - putative exported protein similar to Yersinia pestis CO92 YPO0822 and Yersinia pestis KIM y3209 gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2834 YP_2836 YP2836 YP_2836 3150550 3150858 - hypothetical protein similar to Yersinia pestis CO92 YPO0820 and Yersinia pestis KIM y3208 gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2836 YP_2837 YP2837 cynT2 cynT2 3151234 3151989 + putative carbonic anhydrase similar to Yersinia pestis CO92 YPO0819 and Yersinia pestis KIM y3207. Contains Carbonic anhydrase%2C prokaryotic (Interpro|IPR001765%2C (GO:0015976)). Contains 2-oxo acid dehydrogenase%2C acyltransferase component%2C lipoyl-binding (Interpro|IPR003016). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311) gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2837 YP_2838 YP2838 YP_2838 3152732 3153148 + hypothetical protein similar to Yersinia pestis CO92 YPO0818 and Yersinia pestis KIM y3206 gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2838 YP_2839 YP2839 YP_2839 3153186 3153719 + general secretion pathway protein C similar to Yersinia pestis CO92 YPO0817 and Yersinia pestis KIM y3205. gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2839 YP_2840 YP2840 gspD3 gspD3 3153800 3155722 + putative general secretion protein similar to Yersinia pestis KIM y3204. Contains Bacterial general secretion pathway protein D (Interpro|IPR001775%2C (GO:0016020)). Contains HPr protein%2C serine phosphorylation site (Interpro|IPR002114%2C (GO:0009401)). Contains Type III secretion system outer membrane G protein (Interpro|IPR003522%2C (GO:0009306)%2C (GO:0015448)). Contains Bacterial type II secretion system protein D (Interpro|IPR004845%2C (GO:0008565)). Contains Bacterial type II and III secretion system protein (Interpro|IPR004846%2C (GO:0009306)). Contains NolW-like (Interpro|IPR005644) gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2840 YP_2841 YP2841 gspE gspE 3155719 3157230 + general secretion pathway protein E similar to Yersinia pestis CO92 YPO0815 and Yersinia pestis KIM y3203. Contains Bacterial type II secretion system protein E (Interpro|IPR001482%2C (GO:0006810)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2841 YP_2842 YP2842 hofF hofF 3157211 3158419 + putative general protein secretion protein similar to Yersinia pestis KIM hofF. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains Bacterial type II secretion system protein (Interpro|IPR001992%2C (GO:0016020)). Contains Bacterial general secretion pathway protein F (Interpro|IPR003004%2C (GO:0015628)) gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2842 YP_2843 YP2843 hofG1 hofG1 3158439 3158876 + general secretion pathway protein G similar to Yersinia pestis CO92 YPO0813 and Yersinia pestis KIM hofG. Contains Bacterial general secretion pathway protein G (Interpro|IPR000983%2C (GO:0015628)). Contains Prokaryotic N-terminal methylation site (Interpro|IPR001120). Contains Bacterial general secretion pathway protein H (Interpro|IPR002416%2C (GO:0015628)) gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2843 YP_2844 YP2844 hofG2 hofG2 3158833 3159423 + General secretory pathway proteins G and H and related periplasmic/secreted proteins similar to Yersinia pestis KIM y3200. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains Bacterial general secretion pathway protein H (Interpro|IPR002416%2C (GO:0015628)) gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2844 YP_2845 YP2845 hofG3 hofG3 3159461 3159805 + general secretion pathway protein I similar to Yersinia pestis CO92 YPO0811. Contains Bacterial type II secretion system protein I/J (Interpro|IPR003413%2C (GO:0015628)) gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2845 YP_2846 YP2846 hofG4 hofG4 3159777 3160394 + general secretion pathway protein J similar to Yersinia pestis CO92 YPO0810 and Yersinia pestis KIM y3199. gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2846 YP_2847 YP2847 gspK gspK 3160403 3161359 + general secretion pathway protein K similar to Yersinia pestis CO92 YPO0809 and Yersinia pestis KIM y3198. Contains Ribosome-binding factor A (Interpro|IPR000238%2C (GO:0006364)) gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2847 YP_2848 YP2848 gspL gspL 3161343 3162533 + general secretion pathway protein L similar to Yersinia pestis CO92 YPO0808 and Yersinia pestis KIM y3197. gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2848 YP_2849 YP2849 YP_2849 3162530 3162991 + putative membrane protein similar to Yersinia pestis CO92 YPO0807 and Yersinia pestis KIM y3196 gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2849 YP_2850 YP2850 pppA1 pppA1 3162945 3163859 + putative type IV prepilin peptidase similar to Yersinia pestis KIM y3195. Contains Prepilin cysteine protease (C20)%2C type IV (Interpro|IPR000045%2C (GO:0006508)%2C (GO:0016020)) gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2850 YP_2851 YP2851 YP_2851 3163843 3164208 - putative lipoprotein Best Blastp hit %3D gi|16121117|ref|NP_404430.1| (NC_003143) putative lipoprotein [Yersinia pestis]%2C gi|15978882|emb|CAC89654.1| (AJ414144) putative lipoprotein [Yersinia pestis]%2C(len:101 aa) gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2851 YP_2852 YP2852 YP_2852 3164492 3166531 + similar to Yersinia pestis CO92 YPO0804 (putative regulatory membrane protein)%2C Yersinia pestis y3192%3B disrupted by IS285 element pseudogene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2852 YP_2853 YP2853 YP_2853 3164955 3166163 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2853 YP_2854 YP2854 YP_2854 3166528 3166929 + hypothetical protein similar to Yersinia pestis CO92 YPO0803 gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2854 YP_2855 YP2855 cheD2 cheD2 3167075 3168775 + putative methyl-accepting chemotaxis protein similar to Yersinia pestis CO92 cheD and Yersinia pestis KIM y3190. Contains Ligand binding Tar (Interpro|IPR003122%2C (GO:0016020)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)). Contains Aspartate chemoreceptor protein (Interpro|IPR004091%2C (GO:0016020)). Contains Ligand binding Tar (Interpro|IPR003122%2C (GO:0016020)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)) gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2855 YP_2856 YP2856 YP_2856 3168761 3169396 - putative protein-disulfide isomerase similar to Yersinia pestis CO92 YPO0801 and Yersinia pestis KIM y3189 gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2856 YP_2857 YP2857 gloB4 gloB4 3169509 3170396 - putative exported protein similar to Yersinia pestis CO92 YPO0800 and similar to Yersinia pestis KIM y3188(residues 1 to 295 of 295 are similar to residues 41 to 335 of 335 from Yersinia pestis KIM y3188). Contains Beta-lactamase-like (Interpro|IPR001279) gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2857 YP_2858 YP2858 lysR16 lysR16 3170503 3171411 + LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO0799 and Yersinia pestis KIM y3187. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2858 YP_2859 YP2859 araJ araJ 3171780 3172940 + putative sugar transport protein similar to Yersinia pestis CO92 YPO0798 and Yersinia pestis KIM y3186. Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2859 YP_2860 YP2860 lysR17 lysR17 3172937 3173923 - positive regulator for lys similar to Yersinia pestis KIM lysR. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2860 YP_2861 YP2861 lysA lysA 3174093 3175355 + diaminopimelate decarboxylase similar to Yersinia pestis CO92 lysA and Yersinia pestis KIM lysA. Contains Orn/DAP/Arg decarboxylase%2C family 2 (Interpro|IPR000183%2C (GO:0003824)). Contains Glycoside hydrolase%2C family 10 (Interpro|IPR001000%2C (GO:0005975)). Contains Diaminopimelate decarboxylase (Interpro|IPR002986%2C (GO:0009089)) gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2861 YP_2862 YP2862 galR2 galR2 3175352 3176536 - galactose operon repressor similar to Yersinia pestis CO92 galR and Yersinia pestis KIM galR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761). Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2862 YP_2863 YP2863 bisC bisC 3176684 3178945 + putative biotin sulfoxide reductas2 similar to Yersinia pestis CO92 bisC and similar to Yersinia pestis KIM y3182 (residues 46 to 758 of 758 are similar to residues 1 to 708 of 708 from Yersinia pestis KIM y3182). Contains Carbamoyl-phosphate synthetase large chain (Interpro|IPR005483%2C (GO:0004086)). Contains Molybdopterin oxidoreductase (Interpro|IPR006656). Contains Molydopterin dinucleotide binding domain (Interpro|IPR006657) gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2863 YP_2864 YP2864 aas aas 3179394 3181550 + Aas bifunctional protein similar to Yersinia pestis CO92 aas and Yersinia pestis KIM aas. Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)). Contains Mitochondrial substrate carrier (Interpro|IPR001993%2C (GO:0006810)). Contains Phospholipid/glycerol acyltransferase (Interpro|IPR002123%2C (GO:0008152)%2C (GO:0008415)) gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2864 YP_2865 YP2865 proP28 proP28 3181547 3182767 + putative membrane protein similar to Yersinia pestis CO92 YPO0792 and Yersinia pestis KIM y3180 gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2865 YP_2866 YP2866 YP_2866 3182796 3183029 - hypothetical protein similar to Yersinia pestis KIM y3179. gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2866 YP_2867 YP2867 YP_2867 3183108 3183359 + hypothetical protein Best Blastp hit %3D gi|16121103|ref|NP_404416.1| (NC_003143) hypothetical protein [Yersinia pestis]%2C gi|15978868|emb|CAC89640.1| (AJ414144) hypothetical protein [Yersinia pestis]%2C(len:141 aa) gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2867 YP_2868 YP2868 tas4 tas4 3183736 3184776 - putative aldo/keto reductase-family protein similar to Yersinia pestis CO92 tas and Yersinia pestis KIM y3177. Contains Aldo/keto reductase (Interpro|IPR001395) gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2868 YP_2869 YP2869 mutH mutH 3185147 3185833 - DNA mismatch repair protein similar to Yersinia pestis CO92 mutH and Yersinia pestis KIM mutH. Contains DNA mismatch repair enzyme MutH (Interpro|IPR004230%2C (GO:0006304)) gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2869 YP_2872 YP2872 mutT6 mutT6 3186531 3187058 + NTP pyrophosphohydrolases including oxidative damage repair enzymes similar to Yersinia pestis CO92 YPO0786 and Yersinia pestis KIM y3174. Contains NUDIX hydrolase (Interpro|IPR000086) gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2872 YP_2873 YP2873 ptsP ptsP 3187071 3189317 + phosphoenolpyruvate-protein phosphotransferase similar to Yersinia pestis CO92 ptsP and Yersinia pestis KIM ptsP. Contains PEP-utilizing enzyme (Interpro|IPR000121%2C (GO:0016310)%2C (GO:0016772)). Contains GAF domain (Interpro|IPR003018). Contains Phosphoenolpyruvate-protein phosphotransferase (Interpro|IPR006318) gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2873 YP_2874 YP2874 lgt lgt 3189568 3190440 + prolipoprotein diacylglyceryl transferase similar to Yersinia pestis CO92 lgt and Yersinia pestis KIM lgt. Contains Prolipoprotein diacylglyceryl transferase (Interpro|IPR001640%2C (GO:0016020)%2C (GO:0016740)) gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2874 YP_2875 YP2875 thyA thyA 3190447 3191241 + thymidylate synthase similar to Yersinia pestis CO92 thyA and Yersinia pestis KIM thyA. Contains Thymidylate synthase (Interpro|IPR000398%2C (GO:0006231)) gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2875 YP_2877 YP2877 hofG5 hofG5 3191477 3192046 + putative prepilin peptidase dependent protein similar to Yersinia pestis KIM y3170%2C and similar to gi|16766302|ref|NP_461917.1| prepilin peptidase dependent protein A%2C putative component in type IV pilin biogenesis(156 aa). Contains Prokaryotic N-terminal methylation site (Interpro|IPR001120). Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2877 YP_2878 YP2878 hofG6 hofG6 3192037 3192645 + putative prepilin peptidase dependent protein similar to Yersinia pestis CO92 YPO1015 and Yersinia pestis KIM y3169. Contains Prokaryotic N-terminal methylation site (Interpro|IPR001120) gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2878 YP_2879 YP2879 YP_2879 3192642 3193112 + putative membrane protein similar to Yersinia pestis CO92 YPO1016 and Yersinia pestis KIM y3168 gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2879 YP_2880 YP2880 hofG7 hofG7 3193100 3193510 + putative prepilin peptidase dependent protein similar to Yersinia pestis CO92 YPO1017 and Yersinia pestis KIM y3167. Contains Prokaryotic N-terminal methylation site (Interpro|IPR001120) gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2880 YP_2881 YP2881 recC recC 3193645 3197016 + exodeoxyribonuclease V gamma chain similar to Yersinia pestis CO92 recC. Contains Exodeoxyribonuclease V%2C gamma subunit (Interpro|IPR006347). Contains IExodeoxyribonuclease V%2C RecC subunit (Interpro|IPR006697) gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2881 YP_2882 YP2882 ptrA ptrA 3197098 3199986 + protease III precursor similar to Yersinia pestis CO92 ptrA and Yersinia pestis KIM ptr. Contains Insulinase-like peptidase%2C family M16 (Interpro|IPR001431%2C (GO:0006508)) gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2882 YP_2883 YP2883 recB recB 3199920 3203645 + DNA helicase%2C ATP-dependent dsDNA/ssDNA exonuclease V subunit%2C ssDNA endonuclease similar to Yersinia pestis KIM recB. Contains UvrD/REP helicase (Interpro|IPR000212%2C (GO:0006281)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Exodeoxyribonuclease V%2C beta subunit (Interpro|IPR004586%2C (GO:0008854)) gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2883 YP_2884 YP2884 recD recD 3203642 3205600 + exodeoxyribonuclease V alpha chain similar to Yersinia pestis CO92 recD and Yersinia pestis KIM recD. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Exodeoxyribonuclease V%2C alpha subunit (Interpro|IPR006344) gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2884 YP_2885 YP2885 dnaC_23 dnaC_23 3205849 3206631 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2885 YP_2886 YP2886 YP_2886 3206628 3207650 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2886 YP_2887 YP2887 YP_2887 3207929 3208339 - putative membrane protein similar to Yersinia pestis CO92 YPO0568 and Yersinia pestis KIM y3612. gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2887 YP_2888 YP2888 YP_2888 3208628 3208912 - hypothetical protein similar to Yersinia pestis CO92 YPO0569 and Yersinia pestis KIM y3611. gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2888 YP_2889 YP2889 YP_2889 3208909 3209304 - hypothetical protein similar to Yersinia pestis CO92 YPO0569a and Yersinia pestis KIM y3610 gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2889 YP_2890 YP2890 YP_2890 3209307 3209612 - putative membrane protein similar to Yersinia pestis CO92 YPO0570 and Yersinia pestis KIM y3609 gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2890 YP_2891 YP2891 YP_2891 3209617 3209763 - hypothetical protein similar to Yersinia pestis CO92 YPO0571 and Yersinia pestis KIM y3608. gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2891 YP_2892 YP2892 YP_2892 3209767 3210249 - hypothetical protein similar to Yersinia pestis KIM y3607 gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2892 YP_2893 YP2893 secD2 secD2 3210373 3210762 - putative membrane protein similar to Yersinia pestis CO92 YPO0573 and Yersinia pestis KIM y3606. gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2893 YP_2894 YP2894 dedA2 dedA2 3210759 3211457 - putative DedA-family membrane protein similar to Yersinia pestis CO92 YPO0574 and Yersinia pestis KIM y3605. Contains DedA family (Interpro|IPR000252%2C (GO:0016020)). Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)) gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2894 YP_2895 YP2895 YP_2895 3211735 3212316 - putative lipoprotein similar to Yersinia pestis CO92 YPO0575 and Yersinia pestis KIM y3603. gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2895 YP_2896 YP2896 exuR exuR 3212517 3213395 - exu regulon transcriptional regulator similar to Yersinia pestis CO92 exuR and Yersinia pestis KIM exuR. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)) gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2896 YP_2897 YP2897 exuT1 exuT1 3213574 3214878 - ExuT transport protein similar to Yersinia pestis CO92 exuT and Yersinia pestis KIM exuT. Contains D-galactonate transporter (Interpro|IPR004744%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2897 YP_2899 YP2899 uxaC uxaC 3215599 3217032 + uronate isomerase similar to Yersinia pestis KIM uxaC. Contains Glucuronate isomerase (Interpro|IPR003766%2C (GO:0006064)%2C (GO:0008880)) gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2899 YP_2900 YP2900 uxaB uxaB 3217231 3218682 + altronate oxidoreductase similar to Yersinia pestis CO92 uxaB and Yersinia pestis KIM uxaB. Contains Mannitol dehydrogenase (Interpro|IPR000669%2C (GO:0008152)) gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2900 YP_2901 YP2901 uxaA uxaA 3218693 3220183 + altronate hydrolase similar to Yersinia pestis CO92 uxaA and Yersinia pestis KIM uxaA gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2901 YP_2902 YP2902 YP_2902 3220336 3220866 + putative membrane protein similar to Yersinia pestis CO92 YPO0582 and Yersinia pestis KIM y3597 gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2902 YP_2903 YP2903 tnp_33 tnp_33 3220984 3221493 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2903 YP_2904 YP2904 sstT sstT 3221643 3222962 - Na/dicarboxylate symporter similar to Yersinia pestis KIM y3595. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Haem peroxidase (Interpro|IPR002016%2C (GO:0006804)) gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2904 YP_2905 YP2905 mviM5 mviM5 3223434 3224429 - putative MocA-family oxidoreductase similar to Yersinia pestis CO92 YPO0585. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)) gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2905 YP_2906 YP2906 YP_2906 3224647 3225156 - putative metal-dependent hydrolase similar to Yersinia pestis CO92 YPO0586 and Yersinia pestis KIM y3592 gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2906 YP_2907 YP2907 YP_2907 3225395 3228379 - putative autotransporter protein similar to Yersinia pestis CO92 YPO0587 and Yersinia pestis KIM. Contains Proline-rich extensin (Interpro|IPR002965). Contains Pertactin domain (Interpro|IPR004899). Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2907 YP_2908 YP2908 rsmC1 rsmC1 3228845 3230035 + putative methyltransferase similar to Yersinia pestis CO92 YPO0588 and Yersinia pestis KIM y3590. Contains Site-specific DNA-methyltransferase (cytosine-N4-specific) (Interpro|IPR001091%2C (GO:0008170)). Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C D21 class (Interpro|IPR002295%2C (GO:0008170)) gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2908 YP_2909 YP2909 fadH fadH 3230151 3232199 - 2%2C4-dienoyl-CoA reductase similar to Yersinia pestis CO92 fadH and Yersinia pestis KIM y3589. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains NAD binding site (Interpro|IPR000205). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Flavin-containing monooxygenase FMO (Interpro|IPR000960%2C (GO:0006118)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:flavin oxidoreductase/NADH oxidase (Interpro|IPR001155%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)) gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2909 YP_2910 YP2910 hdeD hdeD 3232385 3232954 - putative membrane protein similar to Yersinia pestis CO92 YPO0590 and Yersinia pestis KIM hdeD. Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)) gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2910 YP_2912 YP2912 sPS1 sPS1 3233345 3234844 - putative kinase protein similar to Yersinia pestis CO92 YPO0592 and Yersinia pestis KIM y3587. Contains Protein kinase (Interpro|IPR000719%2C (GO:0006468)). Contains Tyrosine protein kinase (Interpro|IPR001245%2C (GO:0006468)) gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2912 YP_2913 YP2913 YP_2913 3234876 3236609 - hypothetical protein similar to Yersinia pestis CO92 YPO0593 and Yersinia pestis KIM y3586 gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2913 YP_2914 YP2914 YP_2914 3236665 3237649 - similar to Yersinia pestis CO92 YPO0594 and Yersinia pestis KIM y3585. There is a frameshift after codon 285. The sequnce has been ckecked and believed to be correct. pseudogene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2914 YP_2915 YP2915 YP_2915 3237751 3238452 - hypothetical protein similar to Yersinia pestis CO92 YPO0595 and Yersinia pestis KIM y3584. Contains Von Willebrand factor%2C type A (Interpro|IPR002035) gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2915 YP_2916 YP2916 terX terX 3238391 3239032 - putative tellurium resistance protein similar to Yersinia pestis CO92 terX and Yersinia pestis KIM y3583. Contains Bacterial stress protein (Interpro|IPR003325%2C (GO:0006950)) gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2916 YP_2917 YP2917 terY terY 3239065 3239703 - putative tellurium resistance protein similar to Yersinia pestis CO92 terY and Yersinia pestis KIM y3581. Contains Von Willebrand factor%2C type A (Interpro|IPR002035) gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2917 YP_2918 YP2918 fhaC3 fhaC3 3240418 3242106 + putative hemolysin activator protein similar to Yersinia pestis CO92 YPO0598 and Yersinia pestis KIM y3580. Contains Hemolysin activator HlyB (Interpro|IPR005565) gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2918 YP_2919 YP2919 fhaB2 fhaB2 3242151 3252038 + putative adhesin similar to Yersinia pestis CO92 YPO0599 and Yersinia pestis KIM y3579. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)) gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2919 YP_2920 YP2920 YP_2920 3252035 3252268 + putative membrane protein similar to Yersinia pestis CO92 YPO0600 gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2920 YP_2921 YP2921 YP_2921 3252534 3252761 + hypothetical protein similar to Yersinia pestis CO92 YPO0601 and Yersinia pestis KIM y3577 gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2921 YP_2922 YP2922 YP_2922 3252842 3253273 + hypothetical protein similar to Yersinia pestis CO92 YPO0602 and Yersinia pestis KIM y3576. gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2922 YP_2923 YP2923 fhaB3 fhaB3 3253306 3254061 + Putative hemagglutinin/hemolysin similar to Yersinia pestis KIM y3575. gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2923 YP_2924 YP2924 yapF yapF 3254557 3256842 - putative autotransporter protein similar to Yersinia pestis CO92 yapF and Yersinia pestis KIM y3573. Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2924 YP_2925 YP2925 YP_2925 3256902 3257897 - putative exported protein similar to Yersinia pestis CO92 YPO0607 gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2925 YP_2926 YP2926 YP_2926 3257999 3259378 - putative membrane protein similar to Yersinia pestis CO92 YPO0608 and Yersinia pestis KIM y3570 gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2926 YP_2927 YP2927 YP_2927 3259701 3260819 + putative transporter ATP-binding protein similar to Yersinia pestis CO92 YPO0609 and Yersinia pestis KIM y3569. Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2927 YP_2928 YP2928 YP_2928 3260902 3264255 + hypothetical protein similar to Yersinia pestis CO92 YPO0610 and Yersinia pestis KIM y3568 gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2928 YP_2929 YP2929 purR10 purR10 3264364 3265350 + LacI-family regulatory protein similar to Yersinia pestis CO92 YPO0611 and Yersinia pestis KIM y3567. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2929 YP_2930 YP2930 ugpB4 ugpB4 3265391 3266671 + putative sugar binding protein similar to Yersinia pestis CO92 YPO0612 and Yersinia pestis KIM y3566. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2930 YP_2931 YP2931 malF5 malF5 3266725 3267606 + putative permease protein similar to Yersinia pestis CO92 YPO0613 and Yersinia pestis KIM y3565. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2931 YP_2932 YP2932 malG5 malG5 3267606 3268424 + putative permease similar to Yersinia pestis CO92 YPO0614 and Yersinia pestis KIM y3564. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2932 YP_2933 YP2933 YP_2933 3268421 3268936 + hypothetical protein similar to Yersinia pestis KIM y3563 gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2933 YP_2934 YP2934 bglX2 bglX2 3268987 3271170 + putative glycosyl hydrolase similar to Yersinia pestis CO92 YPO0616 and Yersinia pestis KIM y3562. Contains Glycoside hydrolase%2C family 3%2C N-terminal (Interpro|IPR001764%2C (GO:0005975)). Contains Glycoside hydrolase%2C family 3%2C C-terminal (Interpro|IPR002772%2C (GO:0005975)) gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2934 YP_2935 YP2935 cyaE cyaE 3271234 3272760 - putative membrane protein similar to Yersinia pestis CO92 YPO0617 and Yersinia pestis KIM cyaE. Contains Outer membrane efflux protein (Interpro|IPR003423%2C (GO:0006810)) gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2935 YP_2936 YP2936 YP_2936 3272765 3274534 - putative membrane protein similar to Yersinia pestis CO92 YPO0618. Contains Fusaric acid resistance protein conserved region (Interpro|IPR006726) gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2936 YP_2937 YP2937 emrK1 emrK1 3274650 3275699 - putative HlyD family secretion protein similar to Yersinia pestis CO92 YPO0619 and Yersinia pestis KIM y3558. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2937 YP_2938 YP2938 YP_2938 3275709 3276044 - hypothetical protein similar to Yersinia pestis KIM y3557 gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2938 YP_2939 YP2939 YP_2939 3276041 3276241 - hypothetical protein similar to Yersinia pestis CO92 YPO0621 and Yersinia pestis KIM y3556. gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2939 YP_2940 YP2940 avtA2 avtA2 3277007 3278239 + putative aminotransferase similar to Yersinia pestis CO92 YPO0623 and Yersinia pestis KIM y3555. Contains 1-aminocyclopropane-1-carboxylate synthase (Interpro|IPR001176%2C (GO:0009058)%2C (GO:0016847)). Contains Aminotransferase%2C class-I (Interpro|IPR004838%2C (GO:0009058)). Contains Aminotransferase%2C class I and II (Interpro|IPR004839%2C (GO:0009058)) gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2940 YP_2941 YP2941 nhaC nhaC 3278232 3279683 + putative membrane protein similar to Yersinia pestis CO92 YPO0624 and Yersinia pestis KIM y3554. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2941 YP_2942 YP2942 YP_2942 3279687 3280133 + hypothetical protein similar to Yersinia pestis CO92 YPO0625 and Yersinia pestis KIM y3553 gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2942 YP_2943 YP2943 YP_2943 3280267 3280890 + hypothetical protein similar to Yersinia pestis CO92 YPO0626. gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2943 YP_2944 YP2944 tdcF3 tdcF3 3280906 3281286 + putative translational inhibitor protein similar to Yersinia pestis CO92 YPO0627 and Yersinia pestis KIM y3551. Contains YjgF-like protein (Interpro|IPR006056). Contains Endoribonuclease L-PSP (Interpro|IPR006175) gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2944 YP_2945 YP2945 tdcF4 tdcF4 3281571 3281975 + putative translational inhibitor protein similar to Yersinia pestis CO92 YPO0628 and Yersinia pestis KIM y3550. Contains Endoribonuclease L-PSP (Interpro|IPR006175) gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2945 YP_2946 YP2946 YP_2946 3282190 3282492 - hypothetical protein similar to Yersinia pestis CO92 YPO0629 and Yersinia pestis KIM y3549 gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2946 YP_2947 YP2947 YP_2947 3282752 3283354 - putative protein-disulfide isomerase similar to Yersinia pestis CO92 YPO0630 and Yersinia pestis KIM y3548. gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2947 YP_2948 YP2948 lysR18 lysR18 3283630 3284562 + LysR-family regulatory protein similar to Yersinia pestis CO92 YPO0631 and Yersinia pestis KIM y3547. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)) gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2948 YP_2949 YP2949 YP_2949 3284935 3285524 + similar to gi|21628925|ref|NP_660218.1| cell filamentation-like protein [Haemophilus influenzae biotype aegyptius](311 aa)%3B and to Escherichia coli cell filamentation protein Fic SW:FIC_ECOLI (P20605) (200 aa). There is a framshift after codon67. The sequence has been checked and is believed to be correct. pseudogene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2949 YP_2951 YP2951 YP_2951 3286212 3286466 + hypothetical protein similar to Yersinia pestis CO92 YPO0636 gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2951 YP_2952 YP2952 YP_2952 3286599 3287981 + hypothetical protein similar to Yersinia pestis CO92 YPO0639 and Yersinia pestis KIM y3543. Contains HNH endonuclease (Interpro|IPR002711%2C (GO:0004519)) gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2952 YP_2953 YP2953 YP_2953 3287990 3288460 + hypothetical protein similar to Yersinia pestis KIM y3542 gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2953 YP_2954 YP2954 YP_2954 3288481 3288942 + hypothetical protein similar to Yersinia pestis CO92 YPO0641 and Yersinia pestis KIM y3541. gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2954 YP_2955 YP2955 YP_2955 3288959 3290572 + similar to Yersinia pestis KIM y3540 (hypothetical protein) and Yersinia pestis YPO0641a (hypothetical protein) CO92%3B disrupted by IS285 element pseudogene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2955 YP_2956 YP2956 YP_2956 3289155 3290363 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2956 YP_2957 YP2957 YP_2957 3290550 3290888 + hypothetical protein similar to Yersinia pestis KIM y3539. gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2957 YP_2958 YP2958 rpoD rpoD 3291406 3293301 - RNA polymerase sigma factor RpoD similar to Yersinia pestis CO92 rpoD and Yersinia pestis KIM rpoD. Contains Sigma-70 factor family (Interpro|IPR000943%2C (GO:0016987)) gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2958 YP_2959 YP2959 dnaG dnaG 3293402 3295150 - DNA primase similar to Yersinia pestis CO92 dnaG and Yersinia pestis KIM dnaG. Contains Zn-finger%2C CHC2 type (Interpro|IPR002694%2C (GO:0006260)). Contains Toprim sub-domain (Interpro|IPR006154%2C (GO:0006304)). Contains TOPRIM (Interpro|IPR006171%2C (GO:0006304)). Contains DNA primase (Interpro|IPR006295). Contains Toprim%2C primase (Interpro|IPR006647) gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2959 YP_2960 YP2960 rpsU rpsU 3295286 3295501 - 30S ribosomal protein S21 similar to Yersinia pestis CO92 rpsU and Yersinia pestis KIM rpsU. Contains Ribosomal protein S21 (Interpro|IPR001911%2C (GO:0006412)) gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2960 YP_2961 YP2961 gcp gcp 3295907 3296920 + putative glycoprotease similar to Yersinia pestis CO92 gcp. Contains Glycoprotease (M22) metalloprotease (Interpro|IPR000905%2C (GO:0006508)%2C (GO:0008450)) gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2961 YP_2962 YP2962 YP_2962 3297037 3297687 - putative membrane protein similar to Yersinia pestis CO92 YPO0647. Contains Protein of unknown function DUF205 (Interpro|IPR003811) gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2962 YP_2963 YP2963 folB folB 3297879 3298154 + Dihydroneopterin aldolase Best Blastp hit %3D gi|22127405|ref|NP_670828.1| (NC_004088) putative kinase [Yersinia pestis KIM]%2C gi|21960494|gb|AAM87079.1|AE013956_4 (AE013956) putative kinase [Yersinia pestis KIM]%2C(len:120 aa)%3B. Contains Dihydroneopterin aldolase (Interpro|IPR006157%2C (GO:0006760)) gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2963 YP_2964 YP2964 bacA bacA 3298428 3299246 + putative bacitracin resistance protein similar to Yersinia pestis CO92 bacA and Yersinia pestis KIM bacA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)). Contains Bacitracin resistance protein BacA (Interpro|IPR003824) gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2964 YP_2965 YP2965 cca cca 3299482 3300720 - tRNA nucleotidyltransferase similar to Yersinia pestis CO92 cca and Yersinia pestis KIM cca. Contains Polynucleotide adenylyltransferase (Interpro|IPR002646%2C (GO:0006396)). Contains Metal dependent phosphohydrolase%2C HD region (Interpro|IPR003607%2C (GO:0003824)). Contains Metal-dependent phosphohydrolase%2C HD region (Interpro|IPR006674) gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2965 YP_2966 YP2966 YP_2966 3300880 3301503 - putative exported protein similar to Yersinia pestis CO92 YPO0651 and Yersinia pestis KIM y3528. Contains Bacterial SH3-like region (Interpro|IPR003646) gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2966 YP_2967 YP2967 YP_2967 3301807 3303114 + hypothetical protein similar to Yersinia pestis CO92 YPO0652. Contains Adenylate cyclase (Interpro|IPR002783) gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2967 YP_2968 YP2968 glnE glnE 3303258 3306140 + adenylylating enzyme for glutamine synthetase similar to Yersinia pestis KIM glnE. Contains Glutamate-ammonia ligase adenylyltransferase (Interpro|IPR005190) gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2968 YP_2969 YP2969 rfaE rfaE 3306260 3307705 + ADP-heptose synthase similar to Yersinia pestis CO92 rfaE and Yersinia pestis KIM y3524. Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173). Contains Cytidylyltransferase (Interpro|IPR004820%2C (GO:0009058)%2C (GO:0016779)). Contains Cytidyltransferase-related domain (Interpro|IPR004821) gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2969 YP_2970 YP2970 asoB asoB 3307736 3308992 + putative permease similar to Yersinia pestis CO92 asoB and Yersinia pestis KIM y3523. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2970 YP_2971 YP2971 YP_2971 3309317 3309598 - hypothetical protein similar to Yersinia pestis CO92 YPO0656 and Yersinia pestis KIM y3522 gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2971 YP_2972 YP2972 YP_2972 3309634 3310116 - hypothetical protein similar to Yersinia pestis KIM y3521. gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2972 YP_2973 YP2973 ribB ribB 3310167 3310820 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase similar to Yersinia pestis CO92 ribB and Yersinia pestis KIM ribB. Contains 3%2C4-Dihydroxy-2-butanone 4-phosphate synthase (Interpro|IPR000422%2C (GO:0009231)) gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2973 YP_2974 YP2974 YP_2974 3311279 3312061 + hypothetical protein similar to Yersinia pestis CO92 YPO0659 and Yersinia pestis KIM y3519. Contains Catalytic LigB subunit of aromatic ring-opening dioxygenase (Interpro|IPR004183%2C (GO:0006725)%2C (GO:0016491)) gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2974 YP_2975 YP2975 gsp gsp 3312345 3313505 - Glutathionylspermidine synthase similar to Yersinia pestis CO92 YPO0660 and Yersinia pestis KIM y3518. Contains Glutathionylspermidine synthase (Interpro|IPR005494) gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2975 YP_2976 YP2976 YP_2976 3313515 3314201 - putative exported protein similar to Yersinia pestis CO92 YPO0661 and Yersinia pestis KIM y3517 gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2976 YP_2977 YP2977 YP_2977 3314267 3314437 + hypothetical protein similar to Yersinia pestis CO92 YPO0662 gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2977 YP_2978 YP2978 hasF hasF 3314502 3315905 - ABC-transporter outer membrane component similar to Yersinia pestis CO92 hasF and Yersinia pestis KIM hasF. Contains Outer membrane efflux protein (Interpro|IPR003423%2C (GO:0006810)) gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2978 YP_2979 YP2979 mutT7 mutT7 3316295 3316927 + putative MutT-family protein similar to Yersinia pestis CO92 YPO0664 and Yersinia pestis KIM y3515. Contains NUDIX hydrolase (Interpro|IPR000086). Contains Conserved hypothetical protein 52 (Interpro|IPR004385) gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2979 YP_2980 YP2980 YP_2980 3316961 3317386 + hypothetical protein similar to Yersinia pestis CO92 YPO0665 and Yersinia pestis KIM y3514 gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2980 YP_2981 YP2981 icc icc 3317468 3318295 + Icc protein similar to Yersinia pestis CO92 icc and Yersinia pestis KIM icc. Contains Metallo-phosphoesterase (Interpro|IPR004843%2C (GO:0016787)) gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2981 YP_2982 YP2982 YP_2982 3318292 3318876 + putative esterase similar to Yersinia pestis CO92 YPO0667 and Yersinia pestis KIM y3512. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2982 YP_2983 YP2983 parE parE 3318978 3320873 + topoisomerase IV subunit B similar to Yersinia pestis CO92 parE and Yersinia pestis KIM parE. Contains Topoisomerase IV%2C subunit B (Interpro|IPR000411%2C (GO:0006268)). Contains DNA gyrase%2C subunit B (Interpro|IPR000565%2C (GO:0006265)). Contains DNA topoisomerase II (Interpro|IPR001241%2C (GO:0006265)). Contains DNA gyrase%2C subunit B%2C C-terminal (Interpro|IPR002288%2C (GO:0006265)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Gram negative topoisomerase IV%2C subunit B (Interpro|IPR005737%2C (GO:0006268)) gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2983 YP_2984 YP2984 lysR19 lysR19 3320877 3321788 + LysR-family regulatory protein similar to Yersinia pestis CO92 YPO0669 and Yersinia pestis KIM y3510. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2984 YP_2985 YP2985 mdaB3 mdaB3 3321846 3322430 - putative modulator of drug activity similar to Yersinia pestis CO92 mdaB and Yersinia pestis KIM mdaB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains NAD(P)H dehydrogenase (quinone) (Interpro|IPR003680%2C (GO:0006118)) gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2985 YP_2987 YP2987 parC parC 3322734 3325007 + DNA topoisomerase IV subunit A similar to Yersinia pestis CO92 parC and Yersinia pestis KIM parC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains DNA gyrase/topoisomerase IV%2C subunit A (Interpro|IPR002205%2C (GO:0006265)). Contains Gram negative topoisomerase IV%2C subunit A (Interpro|IPR005742%2C (GO:0006268)). Contains DNA gyrase C-terminal repeat%2C beta-propeller (Interpro|IPR006691) gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2987 YP_2988 YP2988 plsC2 plsC2 3325296 3326027 + putative acyltransferase similar to Yersinia pestis CO92 YPO0672. Contains Phospholipid/glycerol acyltransferase (Interpro|IPR002123%2C (GO:0008152)%2C (GO:0008415)). Contains 1-acyl-sn-glycerol-3-phosphate acyltransferase (Interpro|IPR004552%2C (GO:0016020)) gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2988 YP_2989 YP2989 sufI2 sufI2 3326206 3327630 + putative cell division protein similar to Yersinia pestis CO92 sufI and Yersinia pestis KIM sufI. Contains Multicopper oxidase%2C type 1 (Interpro|IPR001117%2C (GO:0005507)). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311) gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2989 YP_2990 YP2990 YP_2990 3327938 3330282 + similar to Escherichia coli hypothetical protein YgiQ SW:YGIQ_ECOLI (Q46861) (413 aa)%2C and to Vibrio cholerae hypothetical protein VC1711 TR:Q9KRD1 (EMBL:AE004249) (789 aa). Thereis a frameshift after codon 510. The sequence has been checked and is believed to be correct. Contains Protein of unknown function UPF0004 (Interpro|IPR005839%2C (GO:0005554)). Contains Antifreeze protein%2C type I (Interpro|IPR000104) pseudogene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2990 YP_2991 YP2991 aRA14 aRA14 3330304 3331137 - putative aldo/keto reductase family protein similar to Yersinia pestis CO92 YPO0676 and Yersinia pestis KIM y3501. Contains Aldo/keto reductase (Interpro|IPR001395) gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2991 YP_2992 YP2992 YP_2992 3331284 3331493 + hypothetical protein similar to Yersinia pestis CO92 YPO0677 and Yersinia pestis KIM y3500 gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2992 YP_2993 YP2993 YP_2993 3331556 3332713 - putative iron-containing alcohol dehydrogenase similar to Yersinia pestis CO92 YPO0678 and Yersinia pestis KIM y3499. Contains Mercuric reductase (Interpro|IPR000815%2C (GO:0005505)). Contains Iron-containing alcohol dehydrogenase (Interpro|IPR001670%2C (GO:0016491)) gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2993 YP_2994 YP2994 araC6 araC6 3333111 3334004 + AraC-family regulatory protein similar to Yersinia pestis CO92 YPO0679 and Yersinia pestis KIM y3498. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2994 YP_2995 YP2995 dedA3 dedA3 3334096 3334758 - putative DedA-family membrane protein similar to Yersinia pestis CO92 YPO0680 and Yersinia pestis KIM y3497. Contains DedA family (Interpro|IPR000252%2C (GO:0016020)) gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2995 YP_2996 YP2996 metC3 metC3 3334951 3336162 - putative cystathionine beta-lyase similar to Yersinia pestis CO92 metC and Yersinia pestis KIM metC. Contains Cys/Met metabolism pyridoxal-phosphate-dependent enzymes (Interpro|IPR000277%2C (GO:0006520)). Contains Cystathionine beta-lyase%2C bacterial (Interpro|IPR006233). Contains Cys/Met metabolism pyridoxal-phosphate-dependent enzymes (Interpro|IPR000277%2C (GO:0006520)). Contains Cystathionine beta-lyase%2C bacterial (Interpro|IPR006233) gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2996 YP_2997 YP2997 exbB exbB 3336617 3337678 + TonB complex protein similar to Yersinia pestis KIM exbB. Contains MotA/TolQ/ExbB proton channel (Interpro|IPR002898%2C (GO:0006810)%2C (GO:0016020)) gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2997 YP_2998 YP2998 exbD exbD 3337682 3338113 + ExbD/TolR-family transport protein similar to Yersinia pestis CO92 YPO0683 and Yersinia pestis KIM exbD. Contains Biopolymer transport protein ExbD/TolR (Interpro|IPR003400%2C (GO:0016020)) gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2998 YP_2999 YP2999 YP_2999 3338210 3339766 - putative membrane protein similar to Yersinia pestis CO92 YPO0684 and Yersinia pestis KIM y3493 gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=YP_2999 YP_3000 YP3000 YP_3000 3339791 3340363 - hypothetical protein similar to Yersinia pestis CO92 YPO0685 and Yersinia pestis KIM y3492. gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3000 YP_3001 YP3001 YP_3001 3340347 3340820 - hypothetical protein similar to Yersinia pestis KIM y3491 gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3001 YP_3002 YP3002 nrfG5 nrfG5 3340817 3341587 - TPR-repeat-containing proteins similar to Yersinia pestis KIM y3490 gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3002 YP_3003 YP3003 YP_3003 3341571 3342404 - putative exported protein similar to Yersinia pestis CO92 YPO0688 and Yersinia pestis KIM y3489 gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3003 YP_3004 YP3004 YP_3004 3342401 3343276 - putative membrane protein similar to Yersinia pestis CO92 YPO0689 gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3004 YP_3005 YP3005 YP_3005 3343273 3344559 - putative type II secretion protein similar to Yersinia pestis CO92 YPO0690 and Yersinia pestis KIM tadA. Contains Tubulin family (Interpro|IPR000217%2C (GO:0007018)). Contains Bacterial type II secretion system protein E (Interpro|IPR001482%2C (GO:0006810)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3005 YP_3006 YP3006 YP_3006 3344571 3345803 - hypothetical protein similar to Yersinia pestis CO92 YPO0691 and Yersinia pestis KIM y3486 gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3006 YP_3007 YP3007 YP_3007 3345996 3347314 - similar to Actinobacillus actinomycetemcomitans rough colony protein A RcpA TR:Q9X6J1 (EMBL:AF139249) (460 aa)%2C and to Rhizobium sp hypothetical protein Y4XJ SW:Y4XJ_RHISN (P55702) (423 aa). There is a frameshift after codon 284. The sequence has been checked and is believed to be correct. Contains Filamentous bacteriophage Vg4 protein (Interpro|IPR001814%2C (GO:0005554)) pseudogene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3007 YP_3008 YP3008 YP_3008 3347311 3348177 - putative membrane protein similar to Yersinia pestis CO92 YPO0694 and Yersinia pestis KIM y3483 gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3008 YP_3009 YP3009 pppA2 pppA2 3348229 3348651 - putative membrane protein similar to Yersinia pestis CO92 YPO0695 and Yersinia pestis KIM y3482. Contains Plasmodium circumsporozoite protein (Interpro|IPR003067%2C (GO:0003793)) gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3009 YP_3010 YP3010 tnp_34 tnp_34 3348800 3349309 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3010 YP_3011 YP3011 YP_3011 3349662 3352141 + similar to Yersinia pestis CO92 YPO0698 and Yersinia pestis KIM papC. Note this CDS Contains a possible frameshift mutation following codon 389. The sequence has been checked and is believed to be correct. pseudogene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3011 YP_3012 YP3012 fimC6 fimC6 3352157 3352876 + fimbrial chaperone protein similar to Yersinia pestis CO92 YPO0699 and Yersinia pestis KIM y3479. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3012 YP_3013 YP3013 YP_3013 3352901 3354007 + Fimbrial protein similar to Yersinia pestis CO92 YPO0700 and Yersinia pestis KIM y3478. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3013 YP_3014 YP3014 fepB fepB 3354219 3355298 - ferric enterobactin (enterochelin) binding protein similar to Yersinia pestis KIM fepB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3014 YP_3015 YP3015 YP_3015 3356154 3357149 + putative exported protein similar to Yersinia pestis CO92 YPO0702 and Yersinia pestis KIM y3476 gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3015 YP_3016 YP3016 YP_3016 3357241 3357819 - hypothetical protein similar to Yersinia pestis KIM y3475 gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3016 YP_3017 YP3017 YP_3017 3357995 3360122 - similar to gi|15596649|ref|NP_250143.1| (NC_002516) flagellar biosynthesis protein FlhA [Pseudomonas aeruginosa PA01](len:707 aa) and to Vibrio parahaemolyticus polar flagellar assembly protein FlhA TR:Q9Z6F4 (EMBL:AF069392) (699 aa). There is aframeshift after codon 424. The sequence has been checked and is believed to be correct. Contains Bacterial type III secretion FHIPEP (Interpro|IPR001712%2C (GO:0016020)). Contains Bacterial type III secretion FHIPEP (Interpro|IPR001712%2C (GO:0016020)) pseudogene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3017 YP_3018 YP3018 flhB3 flhB3 3360079 3361212 - flagellar biosynthetic protein FlhB similar to Yersinia pestis CO92 flhB and Yersinia pestis KIM flhB. Contains Type III secretion exporter (Interpro|IPR006135%2C (GO:0016020)). Contains Flagellar biosynthetic protein FlhB (Interpro|IPR006136%2C (GO:0016020)). Contains Type III secretion exporter (Interpro|IPR006135%2C (GO:0016020)). Contains Flagellar biosynthetic protein FlhB (Interpro|IPR006136%2C (GO:0016020)) gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3018 YP_3019 YP3019 fliR3 fliR3 3361212 3361985 - flagellar biosynthetic protein FliR similar to Yersinia pestis CO92 fliR. Contains Bacterial export protein%2C family 1 (Interpro|IPR002010%2C (GO:0016020)). Contains Flagellar biosynthesis protein FliR (Interpro|IPR006303). Contains Bacterial export protein%2C family 1 (Interpro|IPR002010%2C (GO:0016020)). Contains Flagellar biosynthesis protein FliR (Interpro|IPR006303) gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3019 YP_3020 YP3020 fliQ3 fliQ3 3361992 3362264 - Flagellar biosynthesis/type III secretory pathway protein similar to Yersinia pestis KIM y3470. Contains Bacterial export protein FliQ%2C family 3 (Interpro|IPR002191%2C (GO:0016020)). Contains Flagellar biosynthesis protein FliQ (Interpro|IPR006305) gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3020 YP_3021 YP3021 fliP3 fliP3 3362266 3363036 - flagellar biosynthetic protein FliP similar to Yersinia pestis CO92 fliP and Yersinia pestis KIM fliP. Contains Flagellar transport protein FliP (Interpro|IPR005837%2C (GO:0016020)). Contains Type III secretion system inner membrane P protein (Interpro|IPR005838%2C (GO:0016020)). Contains Flagellar transport protein FliP (Interpro|IPR005837%2C (GO:0016020)). Contains Type III secretion system inner membrane P protein (Interpro|IPR005838%2C (GO:0016020)) gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3021 YP_3022 YP3022 fliN2 fliN2 3363033 3363446 - flagellar switch protein similar to Yersinia pestis CO92 fliN and Yersinia pestis KIM y3468. Contains Flagellar motor switch FliN protein (Interpro|IPR001172%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009425)). Contains Surface presentation of antigens (SPOA) protein (Interpro|IPR001543). Contains Type III secretion system outer membrane O protein (Interpro|IPR003283%2C (GO:0009306)%2C (GO:0015448)) gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3022 YP_3023 YP3023 fliM fliM 3363439 3364338 - Flagellar motor switch protein similar to Yersinia pestis KIM y3467. Contains Flagellar motor switch FliN protein (Interpro|IPR001172%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009425)) gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3023 YP_3024 YP3024 atoC3 atoC3 3364861 3365889 + sigma-54 transcriptional regulatory protein similar to Yersinia pestis CO92 YPO0712 and Yersinia pestis KIM atoC. Contains CbxX/CfqX superfamily (Interpro|IPR000641%2C (GO:0005524)). Contains Beta and gamma crystallin (Interpro|IPR001064). Contains Sigma-54 factor interaction domain (Interpro|IPR002078%2C (GO:0000160)%2C (GO:0003677)%2C (GO:0006355)). Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3024 YP_3025 YP3025 fliE2 fliE2 3365906 3366286 + flagellar hook-basal body complex protein FliE similar to Yersinia pestis CO92 fliE and Yersinia pestis KIM y3465. Contains Flagellar hook-basal body complex protein FliE (Interpro|IPR001624%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar hook-basal body complex protein FliE (Interpro|IPR001624%2C (GO:0003774)%2C (GO:0009288)) gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3025 YP_3026 YP3026 fliF3 fliF3 3366296 3367936 + putative flagellar M-ring protein similar to Yersinia pestis CO92 fliF and Yersinia pestis KIM fliF. Contains Flagellar FliF M-ring protein (Interpro|IPR000067%2C (GO:0001539)%2C (GO:0009431)). Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains Type III secretion system outer membrane K protein (Interpro|IPR003282%2C (GO:0009306)%2C (GO:0015448)). Contains Secretory protein YscJ/FliF (Interpro|IPR006182). Contains Flagellar FliF M-ring protein (Interpro|IPR000067%2C (GO:0001539)%2C (GO:0009431)). Contains Type III secretion system outer membrane K protein (Interpro|IPR003282%2C (GO:0009306)%2C (GO:0015448)). Contains Secretory protein YscJ/FliF (Interpro|IPR006182) gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3026 YP_3027 YP3027 fliG2 fliG2 3367908 3368951 + Flagellar motor switch protein similar to Yersinia pestis KIM y3463. Contains Flagellar motor switch protein FliG (Interpro|IPR000090%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0009288)) gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3027 YP_3028 YP3028 fliH2 fliH2 3368929 3369672 + flagellar assembly protein FliH similar to Yersinia pestis CO92 fliH and Yersinia pestis KIM y3462. Contains Flagellar assembly protein FliH (Interpro|IPR000563%2C (GO:0001539)%2C (GO:0009288)). Contains Flagellar assembly protein FliH (Interpro|IPR000563%2C (GO:0001539)%2C (GO:0009288)) gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3028 YP_3029 YP3029 fliI3 fliI3 3369665 3371005 + putative flagellum-specific ATP synthase similar to Yersinia pestis CO92 fliI and Yersinia pestis KIM fliI. Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C N-terminal (Interpro|IPR004100%2C (GO:0016469)). Contains ATPase FliI/YscN (Interpro|IPR005714%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0015031)%2C (GO:0016887)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATPase FliI/YscN (Interpro|IPR005714%2C Cellular Component: cyto gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3029 YP_3030 YP3030 nlpD4 nlpD4 3371009 3371446 + Membrane proteins related to metalloendopeptidases similar to Yersinia pestis KIM y3460 gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3030 YP_3031 YP3031 YP_3031 3371774 3372199 - hypothetical protein similar to Yersinia pestis KIM y3459 gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3031 YP_3032 YP3032 YP_3032 3372206 3372472 - putative flagellar regulatory protein similar to Yersinia pestis CO92 YPO0720 and Yersinia pestis KIM y3458 gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3032 YP_3033 YP3033 lfgA lfgA 3372701 3373618 - putative flagellar protein similar to Yersinia pestis KIM lfgA. Contains Flageller protein FlgA (Interpro|IPR004924%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0030288)) gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3033 YP_3034 YP3034 flgB2 flgB2 3373607 3374053 + flagellar basal-body rod protein FlgB similar to Yersinia pestis CO92 flgB and Yersinia pestis KIM lfgB. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgB (Interpro|IPR006300). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgB (Interpro|IPR006300) gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3034 YP_3035 YP3035 flgC2 flgC2 3374056 3374481 + flagellar basal-body rod protein FlgC similar to Yersinia pestis CO92 flgC and Yersinia pestis KIM flgC. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgC (Interpro|IPR006299). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal-body rod protein FlgC (Interpro|IPR006299) gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3035 YP_3036 YP3036 flgD2 flgD2 3374484 3375140 + basal-body rod modification protein FlgD similar to Yersinia pestis CO92 flgD and Yersinia pestis KIM lfgD. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)). Contains Flagellar hook capping protein (Interpro|IPR005648). Contains Flagellar hook capping protein (Interpro|IPR005648) gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3036 YP_3037 YP3037 flgE2 flgE2 3375195 3376436 + flagellar hook protein FlgE similar to Yersinia pestis CO92 flgE and Yersinia pestis KIM flgE. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)) gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3037 YP_3038 YP3038 flgF2 flgF2 3376436 3377167 + putative flagellar rod protein similar to Yersinia pestis KIM flgF. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)) gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3038 YP_3039 YP3039 flgG2 flgG2 3377235 3378020 + flagellar basal-body rod protein FlgG similar to Yersinia pestis CO92 flgG and Yersinia pestis KIM flgG. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)) gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3039 YP_3040 YP3040 flgH2 flgH2 3378055 3378720 + putative flagellar L-ring protein similar to Yersinia pestis CO92 flgH and Yersinia pestis KIM flgH. Contains Flagellar L-ring protein (Interpro|IPR000527%2C (GO:0001539)%2C (GO:0009427)). Contains Flagellar L-ring protein (Interpro|IPR000527%2C (GO:0001539)%2C (GO:0009427)) gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3040 YP_3041 YP3041 flgI2 flgI2 3378734 3379909 + putative flagella basal body protein similar to Yersinia pestis KIM flgI. Contains Flagellar P-ring protein (Interpro|IPR001782%2C (GO:0001539)%2C (GO:0030288)). Contains Flagellar P-ring protein (Interpro|IPR001782%2C (GO:0001539)%2C (GO:0030288)) gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3041 YP_3042 YP3042 flgJ2 flgJ2 3379919 3380212 + flagellar protein FlgJ similar to Yersinia pestis CO92 flgJ and Yersinia pestis KIM y3447. Contains Flagellar protein FlgJ (Interpro|IPR000423%2C (GO:0001539)%2C (GO:0009288)). Contains Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (Interpro|IPR002901%2C (GO:0009253)) gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3042 YP_3043 YP3043 flgK2 flgK2 3380325 3381686 + putative flagellar hook-associated protein similar to Yersinia pestis CO92 flgK and Yersinia pestis KIM HAP1. Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar hook-associated protein (Interpro|IPR002371%2C (GO:0009424)). Contains Flagellar basal body rod protein (Interpro|IPR001444%2C (GO:0003774)%2C (GO:0009288)). Contains Flagellar hook-associated protein (Interpro|IPR002371%2C (GO:0009424)) gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3043 YP_3044 YP3044 YP_3044 3381712 3382670 + similar to Yersinia pestis CO92 flgL and Yersinia pestis KIM y3445. Note this CDS Contains a possible frameshift mutation following codon 84. The sequence has been checked and is believed to be correct. pseudogene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3044 YP_3045 YP3045 YP_3045 3382682 3383695 + hypothetical protein similar to Yersinia pestis KIM y3444 gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3045 YP_3046 YP3046 YP_3046 3383859 3384305 - hypothetical protein similar to Yersinia pestis KIM y3443 gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3046 YP_3047 YP3047 YP_3047 3384286 3385332 - putative regulatory protein similar to Yersinia pestis CO92 YPO0736 and Yersinia pestis KIM y3442. Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3047 YP_3048 YP3048 flaA1 flaA1 3385958 3387159 + similar to Yersinia pestis CO92 flaA1 and Yersinia pestis KIM y3441. pseudogene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3048 YP_3049 YP3049 fliD2 fliD2 3387379 3388656 + putative flagellar hook-associated protein similar to Yersinia pestis CO92 fliD. Contains Flagellar hook-associated protein 2 (Interpro|IPR003481%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)). Contains Flagellar hook-associated protein 2 (Interpro|IPR003481%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)) gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3049 YP_3050 YP3050 fliS2 fliS2 3388666 3389046 + flagellar protein FliS similar to Yersinia pestis CO92 fliS. Contains Flagellar protein FliS (Interpro|IPR003713%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)). Contains Flagellar protein FliS (Interpro|IPR003713%2C Cellular Component: flagellum (sensu Bacteria) (GO:0009288)%2C (GO:0009296)) gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3050 YP_3051 YP3051 YP_3051 3389048 3389374 + hypothetical protein similar to Yersinia pestis CO92 YPO0742 gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3051 YP_3052 YP3052 fliK2 fliK2 3389376 3390515 + putative flagellar hook-length control protein similar to Yersinia pestis CO92 YPO0743. Contains Bacterial transferase hexapeptide repeat (Interpro|IPR001451). Contains Flagellar hook-length control protein (Interpro|IPR001635%2C (GO:0009424)) gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3052 YP_3053 YP3053 YP_3053 3390551 3391024 + putative flagellar biogenesis protein similar to Yersinia pestis CO92 YPO0744. gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3053 YP_3054 YP3054 fliA2 fliA2 3391030 3391725 + putative RNA polymerase sigma factor for flagellar operon similar to Yersinia pestis CO92 fliA. Contains Sigma-70 factor family (Interpro|IPR000943%2C (GO:0016987)). Contains Sigma-70 factor family (Interpro|IPR000943%2C (GO:0016987)) gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3054 YP_3055 YP3055 motA2 motA2 3391741 3392610 + chemotaxis MotA protein similar to Yersinia pestis CO92 motA. Contains Flagellar motor protein MotA (Interpro|IPR000540%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0016020)). Contains Flagellar motor protein MotA (Interpro|IPR000540%2C (GO:0001539)%2C (GO:0003774)%2C (GO:0016020)). Contains MotA/TolQ/ExbB proton channel (Interpro|IPR002898%2C (GO:0006810)%2C (GO:0016020)) gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3055 YP_3056 YP3056 motB2 motB2 3392610 3393521 + chemotaxis MotB protein similar to Yersinia pestis CO92 motB. Contains OmpA/MotB domain (Interpro|IPR006665). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3056 YP_3058 YP3058 YP_3058 3393981 3394577 + hypothetical protein similar to Yersinia pestis CO92 YPO0749 gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3058 YP_3059 YP3059 YP_3059 3394574 3395029 + putative membrane protein similar to Yersinia pestis CO92 YPO0750 gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3059 YP_3060 YP3060 YP_3060 3395013 3395384 + putative membrane protein Best Blastp hit %3D gi|16121069|ref|NP_404382.1| (NC_003143) putative membrane protein [Yersinia pestis]%2C gi|15978834|emb|CAC89602.1| (AJ414144) putative membrane protein [Yersinia pestis]%2C(len:93 aa) gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3060 YP_3061 YP3061 pcpY pcpY 3395530 3395998 - similar to gi|16122596|ref|NP_405909.1| (NC_003143) putative lipoprotein [Yersinia pestis]%2C gi|22125854|ref|NP_669277.1| (NC_004088) putative outer membrane protein [Yersinia pestis KIM](155 aa). There is aframeshift after codon 53. The The sequence has been checked and is believed to be correct. pseudogene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3061 YP_3062 YP3062 YP_3062 3396248 3396550 - putative membrane protein similar to Yersinia pestis CO92 YPO0754. gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3062 YP_3063 YP3063 YP_3063 3397124 3397660 + insertion element IS1661 DNA-binding protein similar to Yersinia pestis CO92 YPO0996 and Yersinia pestis KIM y3440 gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3063 YP_3064 YP3064 tra5E tra5E 3397714 3398499 + transposase for insertion sequence IS1661 similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3064 YP_3065 YP3065 YP_3065 3398530 3399615 - similar to C-termial of many proetin%2C gi|15799909|ref|NP_285921.1| Z0260 gene product [Escherichia coli O157:H7 EDL933]%2C gi|15829483|ref|NP_308256.1| hypothetical protein [Escherichia coli O157:H7]%2C gi|25368323|pir||E90657 hypothetical protein ECs0229 [imported] - Escherichia coli (strain O157:H7%2C substrain RIMD 0509952)%2C gi|25368326|pir||E85508 hypothetical protein Z0260 [imported] - Escherichia coli (strain O157:H7%2C substrain EDL933)%2C gi|12512966|gb|AAG54529.1|AE005198_10 Z0260 gene product [Escherichia coli O157:H7 EDL933]%2C gi|13359685|dbj|BAB33652.1| hypothetical protein [Escherichia coli O157:H7]%2C (616 aa)%3B this CDS has been disrupted by IS100 element. pseudogene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3065 YP_3066 YP3066 YP_3066 3399615 3400055 - hypothetical protein similar to Yersinia pestis CO92 YPO3705 and Yersinia pestis KIM y0039 gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3066 YP_3067 YP3067 YP_3067 3400062 3401543 - hypothetical protein similar to Yersinia pestis CO92 YPO3706 and Yersinia pestis KIM y0038. gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3067 YP_3068 YP3068 YP_3068 3401611 3402111 - hypothetical protein similar to Yersinia pestis CO92 YPO3707 and Yersinia pestis KIM y0037. gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3068 YP_3069 YP3069 hcp7 hcp7 3402632 3403150 + Hemolysin-coregulated protein (uncharacterized) similar to Yersinia pestis CO92 YPO3708 and Yersinia pestis KIM y0036 gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3069 YP_3070 YP3070 YP_3070 3403302 3403652 - hypothetical protein similar to Yersinia pestis KIM y0035 gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3070 YP_3071 YP3071 YP_3071 3403656 3403814 + hypothetical protein similar to Yersinia pestis KIM y0034 gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3071 YP_3072 YP3072 malM malM 3404051 3404980 - maltose operon periplasmic protein similar to Yersinia pestis CO92 malM and Yersinia pestis KIM malM. Contains Hydroxymethylglutaryl-coenzyme A reductase (Interpro|IPR002202%2C (GO:0009058)) gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3072 YP_3073 YP3073 lamB1 lamB1 3405203 3406507 - maltoporin similar to Yersinia pestis CO92 lamB and Yersinia pestis KIM lamB. Contains Porin%2C LamB type (Interpro|IPR003192%2C (GO:0016020)). Contains Porin%2C LamB type (Interpro|IPR003192%2C (GO:0016020)) gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3073 YP_3074 YP3074 malK2 malK2 3406545 3407654 - maltose/maltodextrin transport ATP-binding protein similar to Yersinia pestis CO92 malK and Yersinia pestis KIM malK. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains TOBE domain (Interpro|IPR005116) gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3074 YP_3076 YP3076 malE1 malE1 3408482 3409693 + maltose-binding periplasmic protein precursor similar to Yersinia pestis CO92 malE and Yersinia pestis KIM malE. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)). Contains Maltose binding protein (Interpro|IPR006060%2C (GO:0015768)). Contains Bacterial extracellular solute-binding protein%2C family 1 domain (Interpro|IPR006061%2C (GO:0006810)) gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3076 YP_3077 YP3077 malF6 malF6 3409865 3411457 + inner membrane permease of maltose ABC transporter similar to Yersinia pestis KIM malF. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3077 YP_3078 YP3078 malG6 malG6 3411450 3412361 + maltose transport system permease protein MalG similar to Yersinia pestis CO92 malG and Yersinia pestis KIM malG. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3078 YP_3079 YP3079 YP_3079 3412504 3412911 - putative membrane protein similar to Yersinia pestis CO92 YPO3717 and Yersinia pestis KIM y0025 gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3079 YP_3080 YP3080 pgi pgi 3413046 3414692 - glucose-6-phosphate isomerase similar to Yersinia pestis CO92 pgi and Yersinia pestis KIM pgi. Contains Phosphoglucose isomerase (PGI) (Interpro|IPR001672%2C (GO:0006096)) gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3080 YP_3081 YP3081 lysC2 lysC2 3415063 3416448 + lysine-sensitive aspartokinase III similar to Yersinia pestis CO92 lysC and Yersinia pestis KIM lysC. Contains Aspartate/glutamate/uridylate kinase (Interpro|IPR001048%2C (GO:0008652)). Contains Aspartate kinase (Interpro|IPR001341%2C (GO:0008652)). Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains Aspartate kinase%2C monofunctional class (Interpro|IPR005260) gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3081 YP_3082 YP3082 shlB shlB 3416929 3418708 + similar to gi|16123858|ref|NP_407171.1| (NC_003143) hemolysin activator protein [Yersinia pestis] and gi|15981637|emb|CAC93188.1| (AJ414158) hemolysin activator protein [Yersinia pestis](len:561 aa). Counterpatrs CDS in KIM and CO92 have 7C from nt 209-215%2C while this CDS has 14 C%2C which causes frameshift. The sequence has been checked and is believed to be correct. pseudogene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3082 YP_3083 YP3083 hylA hylA 3418721 3423685 + hemolysin similar to Yersinia pestis CO92 YPO3721 and Yersinia pestis KIM hylA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3083 YP_3084 YP3084 metH metH 3423781 3427476 - 5-Methyltetrahydrofolate--homocysteine methyltransferase similar to Yersinia pestis CO92 metH and Yersinia pestis KIM metH. Contains Dihydropteroate synthase%2C DHPS (Interpro|IPR000489%2C (GO:0009396)). Contains Homocysteine S-methyltransferase (Interpro|IPR003726%2C (GO:0008898)). Contains Cobalamin-dependent methionine synthase%2C B12-binding (Interpro|IPR003759%2C (GO:0009086)). Contains Vitamin B12 dependent methionine synthase activation domain (Interpro|IPR004223%2C Cellular Component: intracellular (GO:0005622)%2C (GO:0009086)). Contains Coenzyme B12-binding (Interpro|IPR006158) gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3084 YP_3085 YP3085 iclR iclR 3427691 3428533 + Transcriptional regulator Best Blastp hit %3D gi|124132|sp|P16528|ICLR_ECOLI Acetate operon repressor%2C gi|146438|gb|AAA24008.1| (M31761) repressor protein (iclR) [Escherichia coli]%2C(len:274 aa)%3B. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory proteins%2C IclR family (Interpro|IPR005471%2C (GO:0006355)). Contains Bacterial transcription regulator%2C ICLR-like family (Interpro|IPR005473%2C (GO:0006355)) gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3085 YP_3086 YP3086 aceK aceK 3428653 3430380 - isocitrate dehydrogenase kinase/phosphatase similar to Yersinia pestis CO92 aceK and Yersinia pestis KIM aceK. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3086 YP_3087 YP3087 aceA aceA 3430636 3431943 - isocitrate lyase similar to Yersinia pestis CO92 aceA and Yersinia pestis KIM aceA. Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)). Contains Isocitrate lyase and phosphorylmutase (Interpro|IPR000918%2C (GO:0008152)). Contains Isocitrate lyase (Interpro|IPR006254) gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3087 YP_3088 YP3088 aceB aceB 3431990 3433588 - malate synthase A similar to Yersinia pestis CO92 aceB and Yersinia pestis KIM aceB. Contains Malate synthase (Interpro|IPR001465%2C (GO:0006099)). Contains Malate synthase A (Interpro|IPR006252) gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3088 YP_3089 YP3089 metA metA 3434009 3434938 - homoserine O-succinyltransferase similar to Yersinia pestis CO92 metA and Yersinia pestis KIM metA. Contains Homoserine O-succinyltransferase (Interpro|IPR005697%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0019281)) gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3089 YP_3091 YP3091 purH purH 3441737 3443371 + bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase similar to Yersinia pestis CO92 purH and Yersinia pestis KIM purH. Contains AICARFT/IMPCHase bienzyme (Interpro|IPR002695%2C (GO:0006164)). Contains Methylglyoxal synthase-like domain (Interpro|IPR004362%2C (GO:0008152)). Contains Asparaginase/glutaminase (Interpro|IPR006034%2C (GO:0006520)) gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3091 YP_3092 YP3092 purD purD 3443431 3444717 + phosphoribosylamine--glycine ligase similar to Yersinia pestis CO92 purD and Yersinia pestis KIM purD. Contains Phosphoribosylglycinamide synthetase (Interpro|IPR000115%2C (GO:0009113)) gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3092 YP_3093 YP3093 YP_3093 3444884 3445585 - putative exported protein similar to Yersinia pestis CO92 YPO3730 and Yersinia pestis KIM y0500. gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3093 YP_3094 YP3094 hupA hupA 3445587 3445862 - DNA-binding protein HU-alpha similar to Yersinia pestis CO92 hupA and Yersinia pestis KIM hupA. Contains Histone-like bacterial DNA-binding protein (Interpro|IPR000119%2C (GO:0003677)) gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3094 YP_3095 YP3095 YP_3095 3446051 3446641 - hypothetical protein similar to Yersinia pestis CO92 YPO3732 and Yersinia pestis KIM y0498. gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3095 YP_3096 YP3096 nfi nfi 3446687 3447427 - endonuclease V (deoxyinosine 3'endoduclease) similar to Yersinia pestis KIM nfi gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3096 YP_3097 YP3097 hemE hemE 3447457 3448524 - uroporphyrinogen decarboxylase similar to Yersinia pestis CO92 hemE and Yersinia pestis KIM hemE. Contains Uroporphyrinogen decarboxylase (URO-D) (Interpro|IPR000257%2C (GO:0006779)). Contains Uroporphyrinogen decarboxylase HemE (Interpro|IPR006361) gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3097 YP_3098 YP3098 YP_3098 3448643 3449428 - hypothetical protein similar to Yersinia pestis CO92 YPO3735 and Yersinia pestis KIM y0495. gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3098 YP_3099 YP3099 nPY1 nPY1 3449521 3450303 - NTP pyrophosphohydrolase containing a Zn-finger similar to Yersinia pestis CO92 YPO3736 and Yersinia pestis KIM y0493. Contains NUDIX hydrolase (Interpro|IPR000086)%3B probably nucleic-acid-binding gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3099 YP_3100 YP3100 rsd rsd 3450388 3450909 + regulator of sigma D similar to Yersinia pestis CO92 rsd and Yersinia pestis KIM y0492. gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3100 YP_3102 YP3102 thiC thiC 3451285 3453330 + thiamine biosynthesis protein ThiC similar to Yersinia pestis CO92 thiC and Yersinia pestis KIM thiC. Contains Thiamine biosynthesis protein ThiC (Interpro|IPR002817%2C (GO:0009228)) gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3102 YP_3103 YP3103 thiE thiE 3453302 3453991 + thiamine-phosphate pyrophosphorylase similar to Yersinia pestis CO92 thiE and Yersinia pestis KIM thiE. Contains Thiamine monophosphate synthase (Interpro|IPR003733%2C (GO:0009228)) gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3103 YP_3104 YP3104 thiF thiF 3453981 3454778 + thiamine biosynthesis protein ThiF similar to Yersinia pestis CO92 thiF and Yersinia pestis KIM thiF. Contains NAD binding site (Interpro|IPR000205). Contains UBA/THIF-type NAD/FAD binding fold (Interpro|IPR000594%2C (GO:0003824)) gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3104 YP_3105 YP3105 thiS thiS 3454718 3454990 + Sulfur transfer protein involved in thiamine biosynthesis Best Blastp hit %3D gi|15804582|ref|NP_290623.1| (NC_002655) thiamin biosynthesis%2C probable sulfur donor [Escherichia coli O157:H7 EDL933]%2C gi|12518920|gb|AAG59188.1|AE005631_3 (AE005631) thiamin biosynthesis%2C probable sulfur donor [Escherichia coli O157:H7 EDL933]%2C(len:66 aa)%3B. Contains ThiamineS (Interpro|IPR003749) gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3105 YP_3106 YP3106 thiG thiG 3454977 3455807 + thiamine biosynthesis protein ThiG similar to Yersinia pestis CO92 thiG and Yersinia pestis KIM thiG. Contains FMN/related compound-binding core (Interpro|IPR003009) gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3106 YP_3107 YP3107 thiH thiH 3455785 3456930 + thiamine biosynthesis protein ThiH similar to Yersinia pestis CO92 thiH and Yersinia pestis KIM thiH. gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3107 YP_3109 YP3109 rpoC rpoC 3457236 3461456 - DNA-directed RNA polymerase beta' chain similar to Yersinia pestis CO92 rpoC and Yersinia pestis KIM rpoC. Contains RNA polymerase%2C alpha subunit (Interpro|IPR000722%2C (GO:0006350)). Contains RNA polymerase I subunit A%2C N-terminal (Interpro|IPR006592). Contains RNA polymerase Rpb1%2C domain 3 (Interpro|IPR007066). Contains RNA polymerase Rpb1%2C domain 1 (Interpro|IPR007080). Contains RNA polymerase Rpb1%2C domain 5 (Interpro|IPR007081). Contains RNA polymerase Rpb1%2C domain 4 (Interpro|IPR007083) gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3109 YP_3110 YP3110 rpoB rpoB 3461585 3465613 - DNA-directed RNA polymerase beta chain similar to Yersinia pestis CO92 rpoB and Yersinia pestis KIM rpoB. Contains DNA-directed RNA polymerase%2C beta subunit (Interpro|IPR001572%2C (GO:0006350)) gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3110 YP_3111 YP3111 rplL rplL 3465956 3466243 - Ribosomal protein L7/L12 Best Blastp hit %3D gi|16123885|ref|NP_407198.1| (NC_003143) 50S ribosomal protein L7/L12 [Yersinia pestis]%2C gi|22124398|ref|NP_667821.1| (NC_004088) 50S ribosomal subunit protein L7/L12 [Yersinia pestis KIM]%2C gi|20978565|sp|Q8ZAP4|RL7_YERPE 50S ribosomal protein L7/L12%2C gi|15981664|emb|CAC93216.1| (AJ414158) 50S ribosomal protein L7/L12 [Yersinia pestis]%2C gi|21957180|gb|AAM84072.1|AE013649_2 (AE013649) 50S ribosomal subunit protein L7/L12 [Yersinia pestis KIM]%2C(len:122 aa) gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3111 YP_3112 YP3112 rplJ rplJ 3466391 3466888 - 50S ribosomal protein L10 similar to Yersinia pestis CO92 rplJ and Yersinia pestis KIM rplJ. Contains Ribosomal protein L10 (Interpro|IPR001790%2C (GO:0006412)). Contains Eubacterial ribosomal protein L10 (Interpro|IPR002363%2C (GO:0006412)) gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3112 YP_3113 YP3113 rplA rplA 3467253 3467957 - 50S ribosomal protein L1 similar to Yersinia pestis CO92 rplA and Yersinia pestis KIM rplA. Contains Ribosomal protein L1 (Interpro|IPR002143%2C (GO:0006412)). Contains Ribosomal protein L1%2C bacterial and chloroplast form (Interpro|IPR005878%2C (GO:0015934)) gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3113 YP_3114 YP3114 rplK rplK 3467961 3468389 - 50S ribosomal protein L11 similar to Yersinia pestis CO92 rplK and Yersinia pestis KIM rplK. Contains Ribosomal protein L11 (Interpro|IPR000911%2C (GO:0006412)). Contains Ribosomal protein L11%2C bacterial (Interpro|IPR006519) gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3114 YP_3115 YP3115 nusG nusG 3468580 3469125 - transcription antitermination protein similar to Yersinia pestis CO92 nusG and Yersinia pestis KIM nusG. Contains Bacterial transcription antitermination protein NusG (Interpro|IPR001062%2C (GO:0006355)). Contains KOW (Interpro|IPR005824). Contains NGN (Interpro|IPR006645). Contains KOW (Kyprides%2C Ouzounis%2C Woese) motif (Interpro|IPR006646) gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3115 YP_3116 YP3116 secE secE 3469127 3469525 - preprotein translocase SecE subunit similar to Yersinia pestis CO92 secE and Yersinia pestis KIM secE. Contains Protein secE/sec61-gamma protein (Interpro|IPR001901%2C (GO:0016020)). Contains SecE subunit of protein translocation complex (Interpro|IPR005807%2C (GO:0009306)%2C (GO:0016021)) gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3116 YP_3117 YP3117 tufA tufA 3469761 3470945 - elongation factor Tu similar to Yersinia pestis CO92 tufA and Yersinia pestis KIM tufB. Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Elongation factor Tu%2C C-terminal (Interpro|IPR004160%2C (GO:0005525)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Translation elongation factor Tu (Interpro|IPR004541%2C (GO:0006414)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains Guanine nucleotide binding protein (G-protein)%2C alpha subunit (Interpro|IPR001019%2C (GO:0007186)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Elongation factor Tu%2C C-terminal (Interpro|IPR004160%2C (GO:0005525)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Translation elongation factor Tu (Interpro|IPR004541%2C (GO:0006414)). C gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3117 YP_3119 YP3119 tra5F tra5F 3471979 3472764 - transposase for insertion sequence IS1661 similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3119 YP_3120 YP3120 YP_3120 3472818 3473333 - insertion element IS1661 DNA-binding protein similar to Yersinia pestis CO92 YPO4091 gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3120 YP_3121 YP3121 ppc ppc 3474075 3476771 - phosphoenolpyruvate carboxylase similar to Yersinia pestis CO92 ppc and Yersinia pestis KIM ppc. Contains Phosphoenolpyruvate carboxylase (Interpro|IPR001449%2C (GO:0006099)%2C (GO:0008964)) gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3121 YP_3122 YP3122 argE2 argE2 3477085 3478254 - acetylornithine deacetylase similar to Yersinia pestis CO92 argE and Yersinia pestis KIM argE. Contains ArgE/dapE/ACY1/CPG2/yscS (Interpro|IPR001261%2C (GO:0006508)%2C (GO:0008237)). Contains Peptidase M20/M25/M40 (Interpro|IPR002933%2C (GO:0006508)%2C (GO:0008237)) gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3122 YP_3123 YP3123 argC argC 3478499 3479503 + N-acetyl-gamma-glutamyl-phosphate reductase similar to Yersinia pestis CO92 argC and Yersinia pestis KIM argC. Contains Semialdehyde dehydrogenase (Interpro|IPR000534%2C (GO:0006520)). Contains N-acetyl-gamma-glutamyl-phosphate reductase (Interpro|IPR000706%2C (GO:0006526)). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3123 YP_3124 YP3124 argB argB 3479669 3480445 + acetylglutamate kinase similar to Yersinia pestis KIM argB. Contains Aspartate/glutamate/uridylate kinase (Interpro|IPR001048%2C (GO:0008652)). Contains Glutamate 5-kinase (Interpro|IPR001057%2C (GO:0006561)). Contains Acetylglutamate kinase (Interpro|IPR004662%2C (GO:0006526)) gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3124 YP_3125 YP3125 argH argH 3480612 3481985 + putative argininosuccinate lyase similar to Yersinia pestis CO92 argH and Yersinia pestis KIM argH. Contains Fumarate lyase (Interpro|IPR000362%2C (GO:0003824)). Contains Delta crystallin (Interpro|IPR003031) gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3125 YP_3126 YP3126 hasR hasR 3482584 3485076 + putative TonB dependent receptor protein similar to Yersinia pestis CO92 YPO3923 and Yersinia pestis KIM hasR. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3126 YP_3127 YP3127 hasA hasA 3485298 3485915 + hemophore HasA similar to Yersinia pestis CO92 YPO3922 and Yersinia pestis KIM hasA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3127 YP_3128 YP3128 hasD hasD 3486066 3487883 + ABC transporter protein similar to Yersinia pestis CO92 YPO3920 and Yersinia pestis KIM hasD. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains RecA bacterial DNA recombination protein (Interpro|IPR001553%2C (GO:0008094)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3128 YP_3129 YP3129 hasE hasE 3487959 3489287 + HlyD family secretion protein similar to Yersinia pestis CO92 YPO3919 and Yersinia pestis KIM hasE. Contains Gram-negative bacterial RTX secretion protein D (Interpro|IPR003997%2C (GO:0009306)%2C (GO:0016020)). Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)). Contains HlyD secretion protein%2C C-terminal (Interpro|IPR006144%2C (GO:0016020)) gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3129 YP_3130 YP3130 hasB hasB 3489352 3490155 + putative membrane protein similar to Yersinia pestis CO92 YPO3918 and Yersinia pestis KIM hasB. Contains TonB%2C C-terminal (Interpro|IPR006260) gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3130 YP_3131 YP3131 lpd lpd 3490271 3491734 - putative pyridine nucleotide-disulfide oxidoreductase similar to Yersinia pestis CO92 YPO3917 and Yersinia pestis KIM y0318. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains Mercuric reductase (Interpro|IPR000815%2C (GO:0005505)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Aromatic-ring hydroxylase (Interpro|IPR003042%2C (GO:0008152)%2C (GO:0016491)). Contains Pyridine nucleotide-disulphide oxidoreductase dimerisation domain (Interpro|IPR004099%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006118)%2C (GO:0016491)) gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3131 YP_3132 YP3132 aHP1 aHP1 3491829 3492560 - putative peroxiredoxin/glutaredoxin family protein similar to Yersinia pestis CO92 YPO3916 and Yersinia pestis KIM y0319. Contains Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (Interpro|IPR000866). Contains Glutaredoxin (Interpro|IPR002109%2C (GO:0006118)%2C (GO:0009491)) gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3132 YP_3133 YP3133 oxyR oxyR 3492707 3493624 + oxidative stress transcriptional regulatory protein similar to Yersinia pestis CO92 oxyR and Yersinia pestis KIM oxyR. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3133 YP_3134 YP3134 sthA sthA 3493607 3495007 - soluble pyridine nucleotide transhydrogenase similar to Yersinia pestis CO92 sthA. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains NAD binding site (Interpro|IPR000205). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Mercuric reductase (Interpro|IPR000815%2C (GO:0005505)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Pyridine nucleotide-disulphide oxidoreductase dimerisation domain (Interpro|IPR004099%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006118)%2C (GO:0016491)) gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3134 YP_3135 YP3135 acrR5 acrR5 3495213 3495860 + TetR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3913 and Yersinia pestis KIM y0322. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3135 YP_3136 YP3136 YP_3136 3495873 3496280 + putative membrane protein similar to Yersinia pestis CO92 YPO3912 and Yersinia pestis KIM y0323 gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3136 YP_3137 YP3137 trmA2 trmA2 3496414 3497517 - tRNA (uracil-5)-methyltransferase similar to Yersinia pestis CO92 trmA and Yersinia pestis KIM trmA. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains tRNA (uracil-5-)-methyltransferase/TrmA (Interpro|IPR001566%2C (GO:0008173)) gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3137 YP_3138 YP3138 btuB btuB 3497913 3499874 + putative vitamin B12 receptor protein similar to Yersinia pestis CO92 YPO3910 and Yersinia pestis KIM btuB. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3138 YP_3139 YP3139 murI murI 3499783 3500682 + putative glutamate racemase similar to Yersinia pestis CO92 murI and Yersinia pestis KIM murI. Contains Asp/Glu racemase (Interpro|IPR001920%2C (GO:0008152)%2C (GO:0016855)). Contains Glutamate racemase (Interpro|IPR004391%2C (GO:0009252)) gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3139 YP_3140 YP3140 rbsB8 rbsB8 3507546 3508502 + putative periplasmic protein precursor similar to Yersinia pestis CO92 YPO3908 and Yersinia pestis KIM y0328. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3140 YP_3141 YP3141 mglA6 mglA6 3508588 3510078 + putative sugar transport system ATP-binding protein similar to Yersinia pestis CO92 YPO3907 and Yersinia pestis KIM y0329. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3141 YP_3142 YP3142 araH10 araH10 3510090 3511109 + putative sugar transport system permease similar to Yersinia pestis CO92 YPO3906 and Yersinia pestis KIM y0330. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3142 YP_3143 YP3143 araH11 araH11 3511109 3512101 + putative sugar transport system permease similar to Yersinia pestis CO92 YPO3905 and Yersinia pestis KIM y0331. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3143 YP_3144 YP3144 lysR20 lysR20 3512088 3512969 - LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3904 and Yersinia pestis KIM y0332. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3144 YP_3145 YP3145 YP_3145 3513088 3513426 + hypothetical protein similar to Yersinia pestis KIM y0333 gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3145 YP_3146 YP3146 YP_3146 3513683 3515206 - putative magnesium chelatase family protein similar to Yersinia pestis CO92 YPO3902. Contains Magnesium chelatase%2C ChlI subunit (Interpro|IPR000523%2C (GO:0015995)%2C (GO:0016851)). Contains Shikimate kinase (Interpro|IPR000623%2C (GO:0008652)). Contains MCM family (Interpro|IPR001208%2C (GO:0008094)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Mg chelatase-related protein (Interpro|IPR004482) gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3146 YP_3147 YP3147 ilvG ilvG 3515829 3517475 + acetolactate synthase isozyme II large subunit similar to Yersinia pestis CO92 ilvG and Yersinia pestis KIM ilvG. Contains Pyruvate decarboxylase (Interpro|IPR000399). Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains Acetolactate synthase large subunit biosynthetic type (Interpro|IPR004407%2C (GO:0009082)) gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3147 YP_3148 YP3148 ilvM ilvM 3517472 3517729 + acetolactate synthase isozyme II small subunit similar to Yersinia pestis CO92 ilvM gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3148 YP_3149 YP3149 ilvE ilvE 3517752 3518678 + branched-chain amino acid aminotransferase similar to Yersinia pestis CO92 ilvE. Contains Aminotransferase%2C class IV (Interpro|IPR001544%2C (GO:0008152)). Contains Branched-chain amino acid aminotransferase I (Interpro|IPR005785%2C (GO:0009081)) gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3149 YP_3150 YP3150 ilvD ilvD 3518941 3520839 + dihydroxy-acid dehydratase similar to Yersinia pestis CO92 ilvD and Yersinia pestis KIM ilvD. Contains Dihydroxy-acid and 6-phosphogluconate dehydratase (Interpro|IPR000581%2C (GO:0008152)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Dihydroxy-acid dehydratase (Interpro|IPR004404%2C (GO:0009082)) gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3150 YP_3151 YP3151 ilvA ilvA 3520845 3522389 + threonine dehydratase similar to Yersinia pestis CO92 ilvA and Yersinia pestis KIM ilvA. Contains Serine/threonine dehydratase%2C pyridoxal-phosphate attachment site (Interpro|IPR000634%2C (GO:0006520)). Contains Threonine dehydratase%2C C-terminal (Interpro|IPR001721%2C (GO:0009097)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)). Contains Threonine dehydratase I (Interpro|IPR005787%2C (GO:0009097)) gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3151 YP_3152 YP3152 YP_3152 3522520 3523005 - putative membrane protein similar to Yersinia pestis CO92 YPO3895 and Yersinia pestis KIM y0340. gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3152 YP_3153 YP3153 YP_3153 3523064 3523546 - putative membrane protein similar to Yersinia pestis CO92 YPO3894 and Yersinia pestis KIM y0341. gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3153 YP_3154 YP3154 YP_3154 3523605 3524066 - putative membrane protein similar to Yersinia pestis CO92 YPO3893 and Yersinia pestis KIM y0342. gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3154 YP_3155 YP3155 YP_3155 3524050 3524964 - hypothetical protein Best Blastp hit %3D gi|16124025|ref|NP_407338.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]%2C gi|15981805|emb|CAC93359.1| (AJ414159) conserved hypothetical protein [Yersinia pestis]%2C(len:230 aa) gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3155 YP_3156 YP3156 YP_3156 3525576 3525785 + hypothetical protein similar to Yersinia pestis CO92 YPO3890 gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3156 YP_3157 YP3157 ilvY ilvY 3525840 3526724 - LysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 ilvY and Yersinia pestis KIM ilvY. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3157 YP_3158 YP3158 ilvC ilvC 3527007 3528485 + ketol-acid reductoisomerase similar to Yersinia pestis CO92 ilvC and Yersinia pestis KIM ilvC. Contains Acetohydroxy acid isomeroreductase (Interpro|IPR000506%2C (GO:0009082)) gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3158 YP_3159 YP3159 YP_3159 3528666 3528866 + hypothetical protein similar to Yersinia pestis CO92 YPO3887 and Yersinia pestis KIM y0346 gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3159 YP_3160 YP3160 YP_3160 3529062 3530504 + similar to Yersinia pestis KIM y0347 and similar to N-terminal 480 aa of gi|16124019|ref|NP_407332.1|colicin (partial) [Yersinia pestis](507 aa). pseudogene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3160 YP_3161 YP3161 YP_3161 3530504 3530767 + hypothetical protein similar to Yersinia pestis CO92 YPO3885 gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3161 YP_3162 YP3162 YP_3162 3531020 3531271 + similar to Yersinia pestis CO92 YPO3884. Contains HNH endonuclease (Interpro|IPR002711%2C (GO:0004519)). Contains HNH nuclease (Interpro|IPR003615) pseudogene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3162 YP_3163 YP3163 imm imm 3531240 3531530 + colicin immunity protein similar to Yersinia pestis CO92 imm. Contains Colicin immunity protein/pyocin immunity protein (Interpro|IPR000290) gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3163 YP_3164 YP3164 YP_3164 3531983 3532141 - hypothetical protein similar to Yersinia pestis CO92 YPO3882. gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3164 YP_3165 YP3165 fimC7 fimC7 3532165 3532983 - putative pilus chaperone%2C PapD family similar to Yersinia pestis KIM y0348. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3165 YP_3166 YP3166 YP_3166 3532949 3534316 - putative exported protein similar to Yersinia pestis CO92 YPO3880 gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3166 YP_3167 YP3167 fimD5 fimD5 3534332 3536959 - putative outer membrane usher protein similar to Yersinia pestis CO92 YPO3879 and Yersinia pestis KIM fimD. Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C (GO:0016020)) gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3167 YP_3168 YP3168 fimC8 fimC8 3536987 3537718 - putative fimbrial chaperone similar to Yersinia pestis CO92 YPO3878. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3168 YP_3169 YP3169 fimA6 fimA6 3537782 3538312 - putative fimbrial protein similar to Yersinia pestis CO92 YPO3877 and Yersinia pestis KIM y0352. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3169 YP_3171 YP3171 YP_3171 3539104 3539895 - putative exported protein similar to Yersinia pestis CO92 YPO3874 and Yersinia pestis KIM y0354 gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3171 YP_3172 YP3172 ppiC ppiC 3540134 3540430 - peptidyl-prolyl cis-trans isomerase C similar to Yersinia pestis KIM ppiC. Contains PpiC-type peptidyl-prolyl cis-trans isomerase (Interpro|IPR000297) gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3172 YP_3173 YP3173 rep rep 3540565 3542640 + ATP-dependent DNA helicase Rep similar to Yersinia pestis CO92 rep and Yersinia pestis KIM rep. Contains UvrD/REP helicase (Interpro|IPR000212%2C (GO:0006281)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent DNA helicase RepA (Interpro|IPR005752%2C (GO:0006268)) gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3173 YP_3175 YP3175 gppA gppA 3542789 3544285 - Exopolyphosphatase Best Blastp hit %3D gi|15804369|ref|NP_290409.1| (NC_002655) guanosine pentaphosphatase%3B exopolyphosphatase [Escherichia coli O157:H7 EDL933]%2C gi|15833966|ref|NP_312739.1| (NC_002695) guanosine pentaphosphatase [Escherichia coli O157:H7]%2C gi|12518639|gb|AAG58973.1|AE005609_5 (AE005609) guanosine pentaphosphatase%3B exopolyphosphatase [Escherichia coli O157:H7 EDL933]%2C gi|13364187|dbj|BAB38135.1| (AP002566) guanosine pentaphosphatase [Escherichia coli O157:H7]%2C(len:494 aa)%3B. Contains Ppx/GppA phosphatase (Interpro|IPR003695%2C (GO:0016302)) gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3175 YP_3176 YP3176 rhlB rhlB 3544289 3545557 - putative DEAD-box helicase similar to Yersinia pestis CO92 rhlB and Yersinia pestis KIM rhlB. Contains ATP-dependent helicase%2C DEAD-box (Interpro|IPR000629%2C (GO:0008026)). Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3176 YP_3177 YP3177 trxA2 trxA2 3545676 3546002 + thioredoxin 1 similar to Yersinia pestis CO92 trxA and Yersinia pestis KIM trxA. Contains Thioredoxin (Interpro|IPR005746%2C (GO:0006118)). Contains Thioredoxin type domain (Interpro|IPR006662%2C (GO:0006118)). Contains Thioredoxin domain 2 (Interpro|IPR006663%2C (GO:0006118)) gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3177 YP_3178 YP3178 rho rho 3546482 3547741 + transcription termination factor similar to Yersinia pestis CO92 rho and Yersinia pestis KIM rho. Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Ribosomal protein L22/L17 (Interpro|IPR001063%2C (GO:0006412)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Transcription termination factor Rho (Interpro|IPR004665%2C (GO:0006353)) gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3178 YP_3179 YP3179 rfe rfe 3548276 3549373 + putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase similar to Yersinia pestis CO92 rfe and Yersinia pestis KIM rfe. Contains Glycosyl transferase%2C family 4 (Interpro|IPR000715%2C (GO:0016020)) gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3179 YP_3180 YP3180 wzzE wzzE 3549391 3550470 + putative lipopolysaccharide biosynthesis protein similar to Yersinia pestis CO92 wzzE and Yersinia pestis KIM wzzE. Contains Lipopolysaccharide biosynthesis (Interpro|IPR003856%2C (GO:0016020)) gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3180 YP_3181 YP3181 rffE rffE 3550765 3551949 + UDP-N-acetylglucosamine 2-epimerase similar to Yersinia pestis CO92 rffE and Yersinia pestis KIM wecB. Contains UDP-N-acetylglucosamine 2-epimerase (Interpro|IPR003331%2C (GO:0006047)%2C (GO:0008761)%2C (GO:0009103)) gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3181 YP_3182 YP3182 rffD rffD 3551946 3553208 + putative UDP-glucose/GDP-mannose dehydrogenase similar to Yersinia pestis CO92 rffD and Yersinia pestis KIM wecC. Contains UDP-glucose/GDP-mannose dehydrogenase (Interpro|IPR001732%2C (GO:0006118)) gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3182 YP_3183 YP3183 rffG rffG 3553199 3554272 + dTDP-glucose 4%2C6-dehydratase similar to Yersinia pestis KIM rffG. Contains NAD-dependent epimerase/dehydratase (Interpro|IPR001509%2C (GO:0009225)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains dTDP-glucose 4%2C6-dehydratase (Interpro|IPR005888%2C (GO:0009225)) gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3183 YP_3184 YP3184 rffH rffH 3554357 3555448 + glucose-1-phosphate thymidylyltransferase similar to Yersinia pestis CO92 rffH and Yersinia pestis KIM rffH. Contains Nucleotidyl transferase (Interpro|IPR005835%2C (GO:0009058)%2C (GO:0016779)). Contains Glucose-1-phosphate thymidylyltransferase%2C long form (Interpro|IPR005907%2C (GO:0045226)) gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3184 YP_3185 YP3185 rffC rffC 3555369 3556163 + putative lipopolysaccharide biosynthesis protein similar to Yersinia pestis CO92 rffC and Yersinia pestis KIM wecD. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3185 YP_3186 YP3186 rffA rffA 3556090 3557295 + putative lipopolysaccharide biosynthesis protein similar to Yersinia pestis CO92 rffA and Yersinia pestis KIM wecE. Contains DegT/DnrJ/EryC1/StrS aminotransferase (Interpro|IPR000653) gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3186 YP_3187 YP3187 wzxE wzxE 3557297 3558553 + putative lipopolysaccharide biosynthesis protein similar to Yersinia pestis CO92 wzxE and Yersinia pestis KIM wzxE. Contains Beta and gamma crystallin (Interpro|IPR001064). Contains Delayed-early response protein/equilibrative nucleoside transporter (Interpro|IPR002259%2C (GO:0016020)). Contains Polysaccharide biosynthesis protein (Interpro|IPR002797%2C (GO:0016020)) gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3187 YP_3188 YP3188 wecF1 wecF1 3558576 3559661 + 4-alpha-L-fucosyltransferase similar to Yersinia pestis CO92 YPO3857 and Yersinia pestis KIM wecF. Contains Beta and gamma crystallin (Interpro|IPR001064) gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3188 YP_3189 YP3189 wecF2 wecF2 3559658 3561022 + putative 4-alpha-L-fucosyltransferase similar to Yersinia pestis CO92 wecF and Yersinia pestis KIM wecF. Contains Beta and gamma crystallin (Interpro|IPR001064) gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3189 YP_3190 YP3190 wecG wecG 3561031 3561771 + putative UDP-N-acetyl-D-mannosaminuronic acid transferase similar to Yersinia pestis CO92 wecG and Yersinia pestis KIM wecG. Contains Glycosyl transferase WecB/TagA/CpsF family (Interpro|IPR004629%2C (GO:0009058)) gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3190 YP_3191 YP3191 ansP3 ansP3 3562295 3563686 + putative permease protein similar to Yersinia pestis CO92 YPO3854 and Yersinia pestis KIM y0375. Contains Amino acid/polyamine transporter%2C family I (Interpro|IPR002293%2C (GO:0016020)). Contains Amino acid permease (Interpro|IPR004840%2C (GO:0016020)). Contains Domain found in permeases (Interpro|IPR004841%2C (GO:0016020)) gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3191 YP_3193 YP3193 tnp_35 tnp_35 3565141 3565650 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3193 YP_3194 YP3194 hemY2 hemY2 3565843 3567063 - putative protoheme IX biogenesis protein similar to Yersinia pestis CO92 hemY and Yersinia pestis KIM hemY. Contains TPR repeat (Interpro|IPR001440). Contains Protoheme IX biosynthesis protein (Interpro|IPR005254) gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3194 YP_3195 YP3195 hemX hemX 3567066 3568199 - uroporphyrinogen III methylase similar to Yersinia pestis KIM hemX gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3195 YP_3196 YP3196 hemD hemD 3568221 3568970 - uroporphyrinogen-III synthase similar to Yersinia pestis CO92 hemD and Yersinia pestis KIM hemD. Contains Uroporphyrinogen III synthase HEM4 (Interpro|IPR003754%2C (GO:0006783)) gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3196 YP_3197 YP3197 hemC hemC 3568967 3570076 - porphobilinogen deaminase similar to Yersinia pestis CO92 hemC and Yersinia pestis KIM hemC. Contains Porphobilinogen deaminase (Interpro|IPR000860%2C (GO:0006779)) gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3197 YP_3198 YP3198 YP_3198 3570129 3570338 - hypothetical protein no significant database match found gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3198 YP_3199 YP3199 cyaA cyaA 3570402 3572954 + adenylate cyclase similar to Yersinia pestis CO92 cyaA and Yersinia pestis KIM cyaA. Contains Adenylate cyclase%2C class-I (Interpro|IPR000274%2C (GO:0006171)) gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3199 YP_3200 YP3200 cyaY cyaY 3573198 3573524 - frataxin-like protein similar to Yersinia pestis CO92 cyaY and Yersinia pestis KIM cyaY. Contains Frataxin-like (Interpro|IPR002908) gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3200 YP_3201 YP3201 YP_3201 3573670 3573858 + putative lipoprotein similar to Yersinia pestis CO92 YPO3846 and Yersinia pestis KIM y0384 gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3201 YP_3202 YP3202 dapF dapF 3574042 3574866 + diaminopimelate epimerase similar to Yersinia pestis CO92 dapF and Yersinia pestis KIM dapF. Contains Diaminopimelate epimerase (Interpro|IPR001653%2C (GO:0009089)) gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3202 YP_3203 YP3203 YP_3203 3574931 3575635 + hypothetical protein similar to Yersinia pestis CO92 YPO3844 and Yersinia pestis KIM y0386 gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3203 YP_3204 YP3204 xerC3 xerC3 3575632 3576543 + putative integrase/recombinase similar to Yersinia pestis CO92 xerC and similar Yersinia pestis KIM xerC (residues 1 to 303 of 303 are similar to residues 6 to 308 of 308 from Yersinia pestis KIM xerC). Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)). Contains Phage integrase%2C N-terminal SAM-like (Interpro|IPR004107%2C (GO:0015074)) gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3204 YP_3205 YP3205 YP_3205 3576543 3577259 + putative haloacid dehalogenase-like hydrolase similar to Yersinia pestis CO92 YPO3842 and Yersinia pestis KIM y0388. Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 (Interpro|IPR006439) gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3205 YP_3206 YP3206 uvrD uvrD 3577355 3579523 + DNA helicase II similar to Yersinia pestis CO92 uvrD and Yersinia pestis KIM uvrD. Contains UvrD/REP helicase (Interpro|IPR000212%2C (GO:0006281)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Mitochondrial substrate carrier (Interpro|IPR001993%2C (GO:0006810)). Contains ATP-dependent DNA helicase UvrD (Interpro|IPR005753%2C (GO:0006268)) gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3206 YP_3207 YP3207 acrR6 acrR6 3579637 3580323 - putative TetR-family regulatory protein similar to Yersinia pestis CO92 YPO3840 and Yersinia pestis KIM y0390. Contains Bacterial regulatory protein TetR%2C HTH motif (Interpro|IPR001647%2C (GO:0006355)) gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3207 YP_3209 YP3209 YP_3209 3580751 3581968 + hypothetical protein similar to Yersinia pestis CO92 YPO3839 and Yersinia pestis KIM y0391. Contains Immunoglobulin/major histocompatibility complex (Interpro|IPR003006) gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3209 YP_3210 YP3210 YP_3210 3581982 3582824 + hypothetical protein similar to Yersinia pestis CO92 YPO3838 and Yersinia pestis KIM y0392 gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3210 YP_3211 YP3211 corA2 corA2 3583425 3584423 + magnesium and cobalt transport protein similar to Yersinia pestis CO92 corA and Yersinia pestis KIM corA. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains Mg2+ transporter protein%2C CorA-like (Interpro|IPR002523%2C (GO:0016020)). Contains Magnesium and cobalt transport protein CorA (Interpro|IPR004488%2C (GO:0015087)%2C (GO:0015095)%2C (GO:0016020)) gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3211 YP_3212 YP3212 rarD rarD 3584521 3585480 - putative membrane protein similar to Yersinia pestis CO92 YPO3836 and Yersinia pestis KIM rarD. Contains Protein of unknown function DUF6 (Interpro|IPR000620). Contains RarD protein (Interpro|IPR004626%2C (GO:0005554)) gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3212 YP_3213 YP3213 paaI2 paaI2 3585498 3585968 - Uncharacterized protein similar to Yersinia pestis CO92 YPO3835 and Yersinia pestis KIM y0395. Contains Phenylacetic acid degradation-related protein (Interpro|IPR003736). Contains Thioesterase superfamily (Interpro|IPR006683%2C (GO:0003824))%3B possibly involved in aromatic compounds catabolism gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3213 YP_3214 YP3214 pldA pldA 3586190 3587068 + phospholipase A similar to Yersinia pestis CO92 pldA and Yersinia pestis KIM pldA. Contains Phospholipase A1 (Interpro|IPR003187%2C (GO:0016020)) gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3214 YP_3215 YP3215 recQ recQ 3587146 3588978 + ATP-dependent DNA helicase similar to Yersinia pestis CO92 recQ and Yersinia pestis KIM recQ. Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)). Contains HRDC domain (Interpro|IPR002121%2C (GO:0005622)). Contains ATP-dependent DNA helicase RecQ (Interpro|IPR004589%2C (GO:0006259)%2C (GO:0008026)). Contains ATP-requiring DNA helicase RecQ (Interpro|IPR006293) gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3215 YP_3216 YP3216 rhtC rhtC 3589085 3589705 + threonine efflux protein similar to Yersinia pestis CO92 rhtC and Yersinia pestis KIM y0398. Contains Lysine exporter protein (LYSE/YGGA) (Interpro|IPR001123%2C (GO:0016020)). Contains Homoserine/Threonine efflux protein (Interpro|IPR004778) gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3216 YP_3217 YP3217 rhtB2 rhtB2 3589756 3590376 - putative homoserine/homoserine lactone efflux protein similar to Yersinia pestis CO92 rhtB and Yersinia pestis KIM rhtB. Contains Lysine exporter protein (LYSE/YGGA) (Interpro|IPR001123%2C (GO:0016020)) gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3217 YP_3218 YP3218 pldB2 pldB2 3590572 3591585 + putative lysophospholipase similar to Yersinia pestis CO92 pldB and Yersinia pestis KIM pldB. Contains Alpha/beta hydrolase fold (Interpro|IPR000073). Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Alpha/beta hydrolase (Interpro|IPR003089%2C (GO:0006725)%2C (GO:0016787)) gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3218 YP_3219 YP3219 cof3 cof3 3591491 3592429 + putative haloacid dehalogenase-like hydrolase similar to Yersinia pestis KIM y0401. Contains Cof protein (Interpro|IPR000150%2C (GO:0005554)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IIB (Interpro|IPR006379) gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3219 YP_3220 YP3220 YP_3220 3592694 3593905 + hypothetical protein similar to Yersinia pestis KIM y0402 gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3220 YP_3221 YP3221 glpQ glpQ 3593979 3595097 - glycerophosphoryl diester phosphodiesterase similar to Yersinia pestis CO92 glpQ and Yersinia pestis KIM glpQ. Contains Glycerophosphoryl diester phosphodiesterase (Interpro|IPR004129%2C (GO:0006071)%2C (GO:0008889)) gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3221 YP_3222 YP3222 glpA glpA 3595719 3597374 + anaerobic glycerol-3-phosphate dehydrogenase subunit A similar to Yersinia pestis CO92 glpA and Yersinia pestis KIM glpA. Contains FAD-dependent glycerol-3-phosphate dehydrogenase (Interpro|IPR000447%2C (GO:0009331)). Contains FAD dependent oxidoreductase (Interpro|IPR006076%2C (GO:0006118)%2C (GO:0016491)) gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3222 YP_3223 YP3223 glpB glpB 3597346 3598638 + sn-glycerol-3-phosphate dehydrogenase (anaerobic)%2C membrane anchor subunit similar to Yersinia pestis KIM glpB gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3223 YP_3224 YP3224 glpC glpC 3598680 3599930 + anaerobic glycerol-3-phosphate dehydrogenase subunit C similar to Yersinia pestis CO92 glpC and Yersinia pestis KIM glpC. Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Protein of unknown function DUF224 (Interpro|IPR004017) gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3224 YP_3225 YP3225 YP_3225 3600092 3600619 - putative lipoprotein similar to Yersinia pestis CO92 YPO3823 and Yersinia pestis KIM y0407 gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3225 YP_3226 YP3226 YP_3226 3600749 3601492 - hypothetical protein similar to Yersinia pestis KIM y0408. Contains Protein of unknown function DUF165 (Interpro|IPR003744) gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3226 YP_3227 YP3227 sirA2 sirA2 3601560 3601955 + putative redox protein%2C regulator of disulfide bond formation similar to Yersinia pestis KIM y0409. Contains Protein of unknown function UPF0033 (Interpro|IPR001455%2C (GO:0005554)) gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3227 YP_3228 YP3228 zntA2 zntA2 3602055 3604421 - putative P-type cation-translocating membrane ATPase similar to Yersinia pestis CO92 YPO3820. Contains H+ transporting ATPase%2C proton pump (Interpro|IPR000695%2C (GO:0016020)). Contains Cadmium-transporting ATPase (Interpro|IPR001366%2C (GO:0016020)). Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Mercury scavenger protein (Interpro|IPR001802%2C (GO:0015694)). Contains Eukaryotic/viral aspartic protease%2C active site (Interpro|IPR001969%2C (GO:0006508)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains Heavy metal transport/detoxification protein (Interpro|IPR006121%2C (GO:0006823)). Contains Heavy metal binding (Interpro|IPR006191). Contains Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (Interpro|IPR006404). Contains Heavy metal translocating P-type ATPase (Interpro|IPR006416) gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3228 YP_3229 YP3229 YP_3229 3604835 3605461 - putative membrane protein similar to Yersinia pestis CO92 YPO3819 and Yersinia pestis KIM y0411 gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3229 YP_3230 YP3230 YP_3230 3605751 3606071 + hypothetical protein similar to Yersinia pestis CO92 YPO3818 and Yersinia pestis KIM y0412 gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3230 YP_3231 YP3231 YP_3231 3606283 3606702 + putative membrane protein similar to Yersinia pestis CO92 YPO3817 and Yersinia pestis KIM y0413 gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3231 YP_3232 YP3232 YP_3232 3606889 3607161 - putative membrane protein similar to Yersinia pestis CO92 YPO3816a and Yersinia pestis KIM y0414 gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3232 YP_3233 YP3233 YP_3233 3607151 3607813 - N6-adenine-specific methylase similar to Yersinia pestis CO92 YPO3816 and Yersinia pestis KIM y0415. Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains Conserved hypothetical protein 95 (Interpro|IPR004398%2C (GO:0005554)) gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3233 YP_3235 YP3235 ftsY ftsY 3608095 3609738 + cell division protein similar to Yersinia pestis CO92 ftsY and Yersinia pestis KIM ftsY. Contains GTP-binding signal recognition particle (SRP54) G-domain (Interpro|IPR000897%2C (GO:0006605)). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Cell division transporter substrate-binding protein FtsY (Interpro|IPR004390%2C (GO:0005525)) gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3235 YP_3236 YP3236 ftsE ftsE 3609744 3610412 + cell division ATP-binding protein similar to Yersinia pestis CO92 ftsE and Yersinia pestis KIM ftsE. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Type II general secretory pathway (IISP) protein (Interpro|IPR005286) gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3236 YP_3237 YP3237 ftsX ftsX 3610402 3611355 + cell division protein similar to Yersinia pestis CO92 ftsX and Yersinia pestis KIM ftsX. Contains Protein of unknown function DUF214 (Interpro|IPR003838). Contains ABC transporter%2C FtsX cell division permease (Interpro|IPR004513%2C (GO:0016021)) gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3237 YP_3238 YP3238 rpoH rpoH 3611666 3612523 + RNA polymerase sigma-32 factor similar to Yersinia pestis CO92 rpoH and Yersinia pestis KIM rpoH. Contains Sigma-70 factor family (Interpro|IPR000943%2C (GO:0016987)) gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3238 YP_3239 YP3239 tnp_36 tnp_36 3612686 3613195 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3239 YP_3240 YP3240 YP_3240 3613441 3613878 - hypothetical protein similar to Yersinia pestis KIM y0421. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3240 YP_3241 YP3241 livK2 livK2 3614240 3615370 + high-affinity leucine-specificleucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system similar to Yersinia pestis KIM livK. Contains Leu/Ile/Val-binding protein family (Interpro|IPR000709%2C (GO:0030288)). Contains Extracellular ligand-binding receptor (Interpro|IPR001828)%3B periplasmic binding protein gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3241 YP_3242 YP3242 livH livH 3615551 3616477 + high-affinity branched-chain amino acid transport system%2C permease protein similar to Yersinia pestis CO92 livH and Yersinia pestis KIM livH. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3242 YP_3243 YP3243 livM3 livM3 3616474 3617760 + high-affinity branched-chain amino acid transport system%2C permease protein similar to Yersinia pestis CO92 livM and Yersinia pestis KIM livM. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3243 YP_3244 YP3244 livG2 livG2 3617757 3618524 + high-affinity branched-chain amino acid transport%2C ATP-binding protein similar to Yersinia pestis CO92 livG and Yersinia pestis KIM livG. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3244 YP_3245 YP3245 livF3 livF3 3618539 3619270 + ATP-binding component of leucine transport similar to Yersinia pestis KIM livF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3245 YP_3246 YP3246 YP_3246 3619498 3619959 + hypothetical protein similar to Yersinia pestis CO92 YPO3803 and Yersinia pestis KIM y0427 gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3246 YP_3247 YP3247 YP_3247 3620074 3621180 - putative exported protein similar to Yersinia pestis CO92 YPO3802 and Yersinia pestis KIM y0428 gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3247 YP_3248 YP3248 YP_3248 3621223 3621741 - putative exported protein similar to Yersinia pestis CO92 YPO3801 and Yersinia pestis KIM y0429 gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3248 YP_3249 YP3249 YP_3249 3621803 3622465 - hypothetical protein similar to Yersinia pestis KIM y0430 gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3249 YP_3250 YP3250 fimC9 fimC9 3622422 3623141 - putative exported protein similar to Yersinia pestis CO92 YPO3799 and Yersinia pestis KIM y0431. Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)) gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3250 YP_3251 YP3251 YP_3251 3623126 3625474 - putative exported protein similar to Yersinia pestis CO92 YPO3798 and Yersinia pestis KIM y0432. Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)) gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3251 YP_3252 YP3252 YP_3252 3625726 3626346 - putative exported proteins Best Blastp hit %3D gi|16123931|ref|NP_407244.1| (NC_003143) putative exported protein [Yersinia pestis]%2C gi|22124348|ref|NP_667771.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|15981711|emb|CAC93264.1| (AJ414159) putative exported protein [Yersinia pestis]%2C gi|21957125|gb|AAM84022.1|AE013644_1 (AE013644) hypothetical [Yersinia pestis KIM]%2C(len:163 aa) gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3252 YP_3253 YP3253 ugpB5 ugpB5 3626772 3628091 + glycerol-3-phosphate-binding periplasmic protein similar to Yersinia pestis CO92 ugpB and Yersinia pestis KIM ugpB. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 1 domain (Interpro|IPR006061%2C (GO:0006810)) gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3253 YP_3254 YP3254 ugpA ugpA 3628389 3629276 + sn-glycerol-3-phosphate transport system%2C permease protein similar to Yersinia pestis CO92 ugpA and Yersinia pestis KIM ugpA. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3254 YP_3255 YP3255 ugpE ugpE 3629273 3630118 + sn-glycerol-3-phosphate transport system%2C permease protein similar to Yersinia pestis CO92 ugpE and Yersinia pestis KIM ugpE. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Aromatic amino acid permease (Interpro|IPR002091%2C (GO:0016020)) gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3255 YP_3256 YP3256 ugpC ugpC 3630125 3631198 + sn-glycerol-3-phosphate transport%2C ATP-binding protein similar to Yersinia pestis CO92 ugpC. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3256 YP_3257 YP3257 ugpQ4 ugpQ4 3631195 3631944 + glycerophosphoryl diester phosphodiesterase similar to Yersinia pestis CO92 ugpQ and Yersinia pestis KIM ugpQ. Contains Glycerophosphoryl diester phosphodiesterase (Interpro|IPR004129%2C (GO:0006071)%2C (GO:0008889)) gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3257 YP_3258 YP3258 YP_3258 3632045 3633001 + putative inner membrane permease similar to Yersinia pestis KIM y0439. Contains Auxin Efflux Carrier (Interpro|IPR004776%2C (GO:0016021)) gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3258 YP_3259 YP3259 rhaT13 rhaT13 3633321 3634253 + putative membrane protein similar to Yersinia pestis CO92 YPO3790 and Yersinia pestis KIM y0440. Contains Protein of unknown function DUF6 (Interpro|IPR000620). Contains Carboxylate/Amino Acid/Amine Transporter (Interpro|IPR004779) gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3259 YP_3260 YP3260 metR metR 3634141 3635094 - lysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 metR and Yersinia pestis KIM metR. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3260 YP_3261 YP3261 metE metE 3635200 3637476 + 5-methyltetrahydropteroyltriglutamate-- homocystei ne methyltransferase similar to Yersinia pestis CO92 metE. Contains Methionine synthase%2C vitamin-B12 independent (Interpro|IPR002629%2C (GO:0009086)). Contains 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Interpro|IPR006276) gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3261 YP_3262 YP3262 YP_3262 3637531 3638403 - putative carboxymethylenebutenolidase similar to Yersinia pestis CO92 YPO3787 and Yersinia pestis KIM y0443. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Dienelactone hydrolase (Interpro|IPR002925%2C (GO:0016787)) gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3262 YP_3263 YP3263 udp udp 3638786 3639592 + uridine phosphorylase similar to Yersinia pestis CO92 udp and Yersinia pestis KIM udp. Contains Purine and other phosphorylases%2C family 1 (Interpro|IPR000845%2C (GO:0009116)) gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3263 YP_3264 YP3264 YP_3264 3639713 3640543 + Protein tyrosine/serine phosphatase similar to Yersinia pestis CO92 YPO3785 and Yersinia pestis KIM y0445 gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3264 YP_3265 YP3265 cstA2 cstA2 3640901 3642718 + putative carbon starvation protein similar to Yersinia pestis CO92 YPO3784 and Yersinia pestis KIM cstA. Contains Carbon starvation protein CstA (Interpro|IPR003706%2C (GO:0016020)) gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3265 YP_3266 YP3266 dedA4 dedA4 3642951 3643520 + putative membrane protein similar to Yersinia pestis CO92 YPO3783 and Yersinia pestis KIM y0447. Contains DedA family (Interpro|IPR000252%2C (GO:0016020)) gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3266 YP_3267 YP3267 rumC rumC 3643728 3645233 + putative DNA recombination protein similar to Yersinia pestis CO92 rumC and Yersinia pestis KIM y0448. Contains Protein of unknown function DUF195 (Interpro|IPR003798) gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3267 YP_3268 YP3268 ubiE ubiE 3645325 3646080 + COQ5 methyltransferase similar to Yersinia pestis KIM ubiE. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Generic methyltransferase (Interpro|IPR001601%2C (GO:0008168)). Contains UbiE/COQ5 methyltransferase (Interpro|IPR004033%2C (GO:0008168)). Contains Ubiquinone/menaquinone biosynthesis methyltransferase (Interpro|IPR004034%2C (GO:0009108)) gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3268 YP_3269 YP3269 YP_3269 3646043 3646744 + hypothetical protein similar to Yersinia pestis CO92 YPO3780 and Yersinia pestis KIM y0450. gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3269 YP_3270 YP3270 aarF aarF 3646744 3648375 + ubiquinone biosynthesis protein similar to Yersinia pestis CO92 aarF and Yersinia pestis KIM y0451. Contains ABC1 protein (Interpro|IPR004147) gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3270 YP_3271 YP3271 tatA tatA 3648555 3648821 + Sec-independent protein translocase protein TatA similar to Yersinia pestis CO92 tatA and Yersinia pestis KIM y0452. Contains Bacterial sec-independent translocation protein mttA/Hcf106 (Interpro|IPR003369%2C (GO:0015031)). Contains Twin-arginine translocation protein TatA/E (Interpro|IPR006312) gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3271 YP_3272 YP3272 tatB tatB 3648825 3649487 + Sec-independent protein translocase protein TatB similar to Yersinia pestis CO92 tatB and Yersinia pestis KIM y0453. Contains Twin-arginine translocation protein TatB (Interpro|IPR003998%2C (GO:0009306)%2C (GO:0016020)) gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3272 YP_3273 YP3273 tatC tatC 3649490 3650266 + Sec-independent protein translocase protein TatC similar to Yersinia pestis CO92 tatC and Yersinia pestis KIM y0454. Contains Sec-independent periplasmic protein translocase (Interpro|IPR002033) gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3273 YP_3274 YP3274 tatD2 tatD2 3650322 3653063 + similar to gi|12644183|sp|P27859|TATD_ECOLI Mg-dependent DNase%2C Deoxyribonuclease tatD.%3B disrupted by IS100 element pseudogene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3274 YP_3275 YP3275 YP_3275 3650888 3651910 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3275 YP_3276 YP3276 dnaC_24 dnaC_24 3651910 3652689 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3276 YP_3277 YP3277 hemB hemB 3653078 3654100 + delta-aminolevulinic acid dehydratase similar to Yersinia pestis CO92 hemB and Yersinia pestis KIM hemB. Contains Delta-aminolevulinic acid dehydratase (Interpro|IPR001731%2C (GO:0006783)) gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3277 YP_3278 YP3278 rfaH rfaH 3654210 3654698 - putative regulatory protein similar to Yersinia pestis CO92 rfaH and Yersinia pestis KIM rfaH. Contains NGN (Interpro|IPR006645). Contains KOW (Kyprides%2C Ouzounis%2C Woese) motif (Interpro|IPR006646) gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3278 YP_3279 YP3279 ubiD ubiD 3654922 3656442 + putative oxidoreductase similar to Yersinia pestis KIM y0461. Contains Carboxylyase-related protein (Interpro|IPR002830) gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3279 YP_3280 YP3280 fadI fadI 3656455 3657198 + NAD(P)H-flavin reductase similar to Yersinia pestis CO92 fadI and Yersinia pestis KIM ubiB. Contains Phenol hydroxylase reductase (Interpro|IPR001221%2C (GO:0006118)). Contains Oxidoreductase FAD/NAD(P)-binding (Interpro|IPR001433%2C (GO:0006118)%2C (GO:0008246)). Contains Flavoprotein pyridine nucleotide cytochrome reductase (Interpro|IPR001709%2C (GO:0006118)%2C (GO:0008246)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)) gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3280 YP_3281 YP3281 fadA fadA 3657358 3658521 - 3-ketoacyl-CoA thiolase similar to Yersinia pestis CO92 fadA and Yersinia pestis KIM fadA. Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Thiolase (Interpro|IPR002155) gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3281 YP_3282 YP3282 fadB fadB 3658533 3660722 - fatty acid oxidation complex alpha subunit similar to Yersinia pestis CO92 fadB and Yersinia pestis KIM fadB. Contains Enoyl-CoA hydratase/isomerase (Interpro|IPR001753%2C (GO:0008152)). Contains 3-hydroxyacyl-CoA dehydrogenase%2C C-terminal (Interpro|IPR006108). Contains 3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain (Interpro|IPR006176). Contains 3-hydroxyacyl-CoA dehydrogenase (Interpro|IPR006180) gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3282 YP_3283 YP3283 pepQ pepQ 3661049 3662380 + proline dipeptidase similar to Yersinia pestis CO92 pepQ and Yersinia pestis KIM pepQ. Contains Metallopeptidase family M24 (Interpro|IPR000994%2C (GO:0006508)%2C (GO:0008235)). Contains Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase (Interpro|IPR001131%2C (GO:0006508)%2C (GO:0008235)) gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3283 YP_3284 YP3284 YP_3284 3662380 3662991 + hypothetical protein Best Blastp hit %3D gi|22124382|ref|NP_667805.1| (NC_004088) hypothetical protein [Yersinia pestis KIM]%2C gi|21957162|gb|AAM84056.1|AE013647_3 (AE013647) hypothetical protein [Yersinia pestis KIM]%2C(len:158 aa)%3B. Contains Protein of unknown function UPF0029 (Interpro|IPR001498%2C (GO:0005554)) gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3284 YP_3285 YP3285 trkH trkH 3663031 3664482 + Trk system potassium uptake protein TrkH similar to Yersinia pestis CO92 trkH and Yersinia pestis KIM trkH. Contains Potassium channel TASK (Interpro|IPR003092%2C (GO:0016020)). Contains Cation transporter (Interpro|IPR003445%2C (GO:0006812)%2C (GO:0008324)). Contains K+ transporter Trk (Interpro|IPR004772%2C (GO:0006812)%2C (GO:0016021)) gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3285 YP_3286 YP3286 hemG hemG 3664504 3665037 + protoporphyrinogen oxidase similar to Yersinia pestis CO92 hemG and Yersinia pestis KIM hemG. Contains Flavodoxin (Interpro|IPR001226%2C (GO:0006118)%2C (GO:0009457)) gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3286 YP_3288 YP3288 murB murB 3671174 3672211 + UDP-N-acetylenolpyruvoylglucosamine reductase similar to Yersinia pestis CO92 murB and Yersinia pestis KIM murB. Contains UDP-N-acetylenolpyruvoylglucosamine reductase (Interpro|IPR003170). Contains FAD linked oxidase%2C N-terminal (Interpro|IPR006094%2C (GO:0008246)) gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3288 YP_3289 YP3289 birA birA 3672208 3673167 + bifunctional protein BirA similar to Yersinia pestis CO92 birA and Yersinia pestis KIM birA. Contains Biotin protein ligase%2C C-terminal (Interpro|IPR003142%2C (GO:0006464)). Contains Biotin/lipoate A/B protein ligase domain (Interpro|IPR004143%2C (GO:0006464)). Contains Biotin--acetyl-CoA-carboxylase ligase (Interpro|IPR004408%2C (GO:0006464)). Contains Helix-turn-helix repressor region (Interpro|IPR004409%2C (GO:0006355)%2C (GO:0016564)) gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3289 YP_3290 YP3290 coaA coaA 3673202 3674152 - pantothenate kinase similar to Yersinia pestis CO92 coaA and Yersinia pestis KIM coaA. Contains Uridine kinase (Interpro|IPR000764%2C (GO:0006224)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial pantothenate kinase (Interpro|IPR004566%2C (GO:0015937)). Contains Phosphoribulokinase/uridine kinase (Interpro|IPR006083%2C (GO:0016301)) gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3290 YP_3291 YP3291 wecD3 wecD3 3674363 3674914 - putative acetyltransferase similar to Yersinia pestis CO92 YPO3757 and similar to Yersinia pestis KIM y0474(residues 1 to 183 of 183 are similar to residues 12 to 194 of 194 from Yersinia pestis KIM y0474). Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3291 YP_3292 YP3292 YP_3292 3674877 3674990 + similar to C-terminal of gi|22126460|ref|NP_669883.1| (NC_004088) putative transcriptional regulator [Yersinia pestis KIM]%2C gi|21959452|gb|AAM86134.1|AE013859_15 (AE013859) putative transcriptional regulator [Yersinia pestis KIM]%2C(len:295 aa)%3B This CDS has been disrupted by IS100 element and seems to have lost the N-terminus. pseudogene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3292 YP_3293 YP3293 YP_3293 3675004 3676026 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3293 YP_3294 YP3294 dnaC_25 dnaC_25 3676023 3676805 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3294 YP_3295 YP3295 YP_3295 3676872 3677357 + similar to Yersinia pestis KIM y0305 and transposase for insertion sequence IS1661 [Yersinia pestis CO92]%3B this CDS has been disrupted by IS100 element%2C lacking the C-terminus pseudogene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3295 YP_3296 YP3296 YP_3296 3677712 3678143 - hypothetical protein similar to Yersinia pestis CO92 YPO3934 and Yersinia pestis KIM y3894. gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3296 YP_3297 YP3297 YP_3297 3678146 3678625 - putative membrane protein similar to Yersinia pestis CO92 YPO3935 and Yersinia pestis KIM y3893. gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3297 YP_3298 YP3298 YP_3298 3678919 3679293 - putative membrane protein similar to Yersinia pestis CO92 YPO3936 and Yersinia pestis KIM y3892 gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3298 YP_3299 YP3299 glpD glpD 3679608 3681206 + aerobic glycerol-3-phosphate dehydrogenase similar to Yersinia pestis CO92 glpD and Yersinia pestis KIM glpD. This CDS in CO92 is a partial gene. Contains FAD-dependent glycerol-3-phosphate dehydrogenase (Interpro|IPR000447%2C (GO:0009331)). Contains FAD dependent oxidoreductase (Interpro|IPR006076%2C (GO:0006118)%2C (GO:0016491)) gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3299 YP_3300 YP3300 glgP glgP 3681369 3683888 - glycogen phosphorylase similar to Yersinia pestis CO92 glgP and Yersinia pestis KIM glgP. Contains Glycosyl transferase%2C family 35 (Interpro|IPR000811%2C (GO:0005975)) gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3300 YP_3301 YP3301 glgA glgA 3683985 3685421 - glycogen synthase similar to Yersinia pestis CO92 glgA and Yersinia pestis KIM glgA. Contains Glycosyl transferase%2C family 1 (Interpro|IPR001296%2C (GO:0009058)). Contains HPr protein%2C serine phosphorylation site (Interpro|IPR002114%2C (GO:0009401)) gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3301 YP_3302 YP3302 glgC glgC 3685483 3686913 - glucose-1-phosphate adenylyltransferase similar to Yersinia pestis CO92 glgC and Yersinia pestis KIM glgC. Contains Nucleotidyl transferase (Interpro|IPR005835%2C (GO:0009058)%2C (GO:0016779)). Contains ADP-glucose pyrophosphorylase (Interpro|IPR005836%2C (GO:0005978)%2C (GO:0008878)) gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3302 YP_3303 YP3303 glgX glgX 3686923 3688911 - putative alpha-amylase similar to Yersinia pestis CO92 glgX and Yersinia pestis KIM glgX. Contains Aldo/keto reductase (Interpro|IPR001395). Contains Glycoside hydrolase%2C family 13%2C N-terminal (Interpro|IPR004193%2C (GO:0005975)). Contains Glycoside hydrolase family 13 (Interpro|IPR006046%2C (GO:0005975)). Contains Alpha amylase%2C catalytic domain (Interpro|IPR006047%2C (GO:0005975)). Contains Alpha amylase%2C catalytic subdomain (Interpro|IPR006589%2C (GO:0005975)) gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3303 YP_3304 YP3304 glgB glgB 3688913 3691096 - 1%2C4-alpha-glucan branching enzyme similar to Yersinia pestis CO92 glgB and Yersinia pestis KIM glgB. Contains Glycoside hydrolase%2C family 13%2C N-terminal (Interpro|IPR004193%2C (GO:0005975)). Contains Alpha amylase%2C catalytic domain (Interpro|IPR006047%2C (GO:0005975)). Contains 1%2C4-alpha-glucan branching enzyme (Interpro|IPR006407). Contains Alpha amylase%2C catalytic subdomain (Interpro|IPR006589%2C (GO:0005975)) gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3304 YP_3305 YP3305 YP_3305 3691602 3693299 + putative membrane protein similar to Yersinia pestis CO92 YPO3943 and Yersinia pestis KIM y3885. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)) gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3305 YP_3306 YP3306 YP_3306 3693507 3702833 - putative invasin similar to Yersinia pestis CO92 YPO3944 and Yersinia pestis KIM y3884. This CDS is 97 codon longer than YPO3944 and y3884%2C and the 97 aa fragment seems to be a degenerate repeat copy in the CDS. Contains Peptidoglycan-binding LysM (Interpro|IPR002482%2C (GO:0016998)). Contains Bacterial Ig-like%2C group 1 (Interpro|IPR003344). Contains Intimin bacterial adhesion mediator protein (Interpro|IPR003535%2C (GO:0007155)) gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3306 YP_3308 YP3308 YP_3308 3704569 3704856 - hypothetical protein similar to Yersinia pestis CO92 YPO3946 and Yersinia pestis KIM y3882 gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3308 YP_3309 YP3309 YP_3309 3704863 3705162 - hypothetical protein Best Blastp hit %3D gi|16124075|ref|NP_407388.1| (NC_003143) hypothetical protein [Yersinia pestis]%2C gi|22127752|ref|NP_671175.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|15981855|emb|CAC93409.1| (AJ414159) hypothetical protein [Yersinia pestis]%2C gi|21960877|gb|AAM87426.1|AE013992_2 (AE013992) hypothetical [Yersinia pestis KIM]%2C(len:124 aa) gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3309 YP_3310 YP3310 YP_3310 3705478 3705759 - hypothetical protein similar to Yersinia pestis CO92 YPO3948 gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3310 YP_3311 YP3311 asd2 asd2 3705928 3707031 - aspartate semialdehyde dehydrogenase similar to Yersinia pestis CO92 asd and Yersinia pestis KIM asd. Contains Semialdehyde dehydrogenase (Interpro|IPR000534%2C (GO:0006520)). Contains Aspartate-semialdehyde dehydrogenase (Interpro|IPR000319%2C (GO:0006520)). Contains Semialdehyde dehydrogenase (Interpro|IPR000534%2C (GO:0006520)) gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3311 YP_3312 YP3312 marC3 marC3 3707398 3707982 + putative membrane protein similar to Yersinia pestis CO92 YPO3950 and Yersinia pestis KIM y3879. Contains Multiple antibiotic resistance (Mar)-related protein (Interpro|IPR002771) gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3312 YP_3313 YP3313 YP_3313 3708222 3708626 - hypothetical protein similar to Yersinia pestis CO92 YPO3951 and Yersinia pestis KIM y3878 gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3313 YP_3314 YP3314 YP_3314 3708997 3709230 - hypothetical protein similar to Yersinia pestis CO92 YPO3952 and Yersinia pestis KIM y3877 gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3314 YP_3315 YP3315 gntV gntV 3709412 3709915 - putative gluconokinase similar to Yersinia pestis CO92 YPO3953 and Yersinia pestis KIM gntV. Contains Shikimate kinase (Interpro|IPR000623%2C (GO:0008652)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Carbohydrate kinase%2C thermoresistant glucokinase (Interpro|IPR006001%2C (GO:0005975)%2C (GO:0016301)) gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3315 YP_3316 YP3316 gntT1 gntT1 3710165 3711448 + putative gluconate permease similar to Yersinia pestis CO92 gntT and Yersinia pestis KIM gntT. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Gluconate transporter (Interpro|IPR003474%2C (GO:0016020)) gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3316 YP_3317 YP3317 gntR1 gntR1 3711540 3712535 - gluconate utilization system Gnt-I transcriptional repressor similar to Yersinia pestis CO92 gntR and Yersinia pestis KIM gntR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3317 YP_3318 YP3318 YP_3318 3712664 3713359 - Pirin-related protein similar to Yersinia pestis CO92 YPO3956 and Yersinia pestis KIM y3872. Contains Protein of unknown function DUF209 (Interpro|IPR003829). Contains Cupin domain (Interpro|IPR007113) gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3318 YP_3319 YP3319 YP_3319 3713488 3713712 - hypothetical protein no significant database match found gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3319 YP_3321 YP3321 ompR4 ompR4 3714123 3714842 + putative response regulator protein similar to Yersinia pestis CO92 YPO3958 and Yersinia pestis KIM ompR. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3321 YP_3322 YP3322 rbsK4 rbsK4 3715027 3716034 - PfkB family carbohydrate kinase similar to Yersinia pestis CO92 YPO3959. Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173) gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3322 YP_3323 YP3323 fba fba 3716044 3716985 - putative class-II fructose-bisphosphate aldolase similar to Yersinia pestis CO92 YPO3960 and Yersinia pestis KIM y3869. Contains Ketose-bisphosphate aldolase%2C class-II (Interpro|IPR000771%2C (GO:0008270)) gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3323 YP_3324 YP3324 YP_3324 3716930 3717613 - hypothetical protein similar to Yersinia pestis CO92 YPO3961 and Yersinia pestis KIM y3868 gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3324 YP_3325 YP3325 rbsB9 rbsB9 3717688 3718632 - sugar-binding transport protein similar to Yersinia pestis CO92 YPO3962 and Yersinia pestis KIM y3867. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3325 YP_3326 YP3326 rbsC2 rbsC2 3718663 3719655 - sugar transport system permease protein similar to Yersinia pestis CO92 YPO3963 and Yersinia pestis KIM rbsC. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3326 YP_3327 YP3327 rbsA3 rbsA3 3719648 3721171 - sugar transport ATP-binding protein similar to Yersinia pestis CO92 YPO3964 and Yersinia pestis KIM rbsA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)). Contains GTP1/OBG family (Interpro|IPR006073). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3327 YP_3328 YP3328 baeS9 baeS9 3721360 3723915 + putative hybrid two-component system regulatory protein similar to Yersinia pestis CO92 YPO3965 and Yersinia pestis KIM y3864. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3328 YP_3329 YP3329 YP_3329 3724051 3725433 - putative flavoproteins similar to Yersinia pestis KIM y3863. Contains NAD binding site (Interpro|IPR000205). Contains H+-transporting two-sector ATPase%2C A subunit (Interpro|IPR000568%2C (GO:0016020)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains HI0933-like protein (Interpro|IPR004792) gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3329 YP_3330 YP3330 pitA pitA 3725459 3727054 + low-affinity inorganic phosphate transport protein similar to Yersinia pestis KIM pitA. Contains Phosphate transporter (Interpro|IPR001204%2C (GO:0016020)). Contains Phosphopantetheine attachment site (Interpro|IPR006162) gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3330 YP_3331 YP3331 tnp_37 tnp_37 3727269 3727778 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3331 YP_3332 YP3332 uspB uspB 3727911 3728273 - universal stress protein B similar to Yersinia pestis CO92 uspB and Yersinia pestis KIM y3860. gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3332 YP_3333 YP3333 uspA2 uspA2 3728954 3729400 + universal stress protein A similar to Yersinia pestis CO92 uspA and Yersinia pestis KIM uspA. Contains Universal stress protein (Usp) (Interpro|IPR006015). Contains Usp domain (Interpro|IPR006016) gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3333 YP_3334 YP3334 gdhA gdhA 3729647 3730990 + NADP-specific glutamate dehydrogenase similar to Yersinia pestis CO92 gdhA and Yersinia pestis KIM gdhA. Contains Glu/Leu/Phe/Val dehydrogenase (Interpro|IPR006095%2C (GO:0006520)%2C (GO:0016491)). Contains Glu/Leu/Phe/Val dehydrogenase%2C C terminal (Interpro|IPR006096%2C (GO:0006520)%2C (GO:0016491)). Contains Glu/Leu/Phe/Val dehydrogenase%2C dimerisation domain (Interpro|IPR006097%2C (GO:0006520)%2C (GO:0016491)) gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3334 YP_3335 YP3335 YP_3335 3731235 3732572 + metalloprotease similar to Yersinia pestis CO92 YPO3973 and Yersinia pestis KIM y3857. Contains Hemolysin-type calcium-binding region (Interpro|IPR001343%2C (GO:0005509)). Contains Matrixin (Interpro|IPR001818%2C (GO:0006508)). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)). Contains Neutral zinc metallopeptidase (Interpro|IPR006026%2C (GO:0006508)%2C (GO:0008237)). Contains RTX (repeat in structural toxin) (Interpro|IPR006661) gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3335 YP_3336 YP3336 smtA9 smtA9 3732637 3733407 - SAM-dependent methyltransferases similar to Yersinia pestis CO92 YPO3974 and Yersinia pestis KIM y3856. gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3336 YP_3337 YP3337 opdA opdA 3733411 3735453 - oligopeptidase A similar to Yersinia pestis CO92 opdA and Yersinia pestis KIM prlC. Contains Peptidase M3 (Interpro|IPR001567%2C (GO:0006508)). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)) gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3337 YP_3338 YP3338 YP_3338 3735599 3735754 + hypothetical protein similar to Yersinia pestis KIM y3854. gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3338 YP_3339 YP3339 YP_3339 3735782 3736624 + Protein involved in catabolism of external DNA similar to Yersinia pestis CO92 YPO3976 and Yersinia pestis KIM y3853. Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)) gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3339 YP_3340 YP3340 gor gor 3736780 3738162 + glutathione oxidoreductase similar to Yersinia pestis KIM gor. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains Mercuric reductase (Interpro|IPR000815%2C (GO:0005505)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Pyridine nucleotide-disulphide oxidoreductase dimerisation domain (Interpro|IPR004099%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006118)%2C (GO:0016491)). Contains Glutathione reductase%2C animal and bacterial (Interpro|IPR006322) gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3340 YP_3341 YP3341 YP_3341 3738354 3739481 + putative regulatory protein similar to Yersinia pestis CO92 YPO3978 and Yersinia pestis KIM y3851 gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3341 YP_3342 YP3342 gntT2 gntT2 3739659 3740927 + GntP family permease similar to Yersinia pestis CO92 YPO3979 and Yersinia pestis KIM y3850. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Blood group Rhesus C/E and D polypeptide (Interpro|IPR002229). Contains Gluconate transporter (Interpro|IPR003474%2C (GO:0016020)) gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3342 YP_3343 YP3343 glxK glxK 3740938 3742074 + putative glycerate kinase similar to Yersinia pestis CO92 glxK and Yersinia pestis KIM y3849. Contains Conserved hypothetical protein 45 (Interpro|IPR004381%2C (GO:0008887)) gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3343 YP_3344 YP3344 YP_3344 3742320 3742826 - putative exported protein similar to Yersinia pestis CO92 YPO3981 and Yersinia pestis KIM y3848. Contains Calcium-binding EF-hand (Interpro|IPR002048%2C (GO:0005509)) gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3344 YP_3345 YP3345 YP_3345 3742894 3743391 - hypothetical protein similar to Yersinia pestis CO92 YPO3982 and Yersinia pestis KIM y3847 gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3345 YP_3346 YP3346 YP_3346 3743393 3744262 - hypothetical protein similar to Yersinia pestis CO92 YPO3983 and Yersinia pestis KIM y3846 gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3346 YP_3347 YP3347 yapE yapE 3744350 3747604 - putative autotransporter protein similar to Yersinia pestis CO92 yapE and Yersinia pestis KIM yapE. Contains Pertactin virulence factor%2C C-terminal (Interpro|IPR003991%2C (GO:0007155)). Contains Pertactin domain (Interpro|IPR004899). Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3347 YP_3348 YP3348 rbn2 rbn2 3748240 3749322 + putative membrane protein similar to Yersinia pestis CO92 YPO3985 and Yersinia pestis KIM y3844. Contains Ribonuclease BN (Interpro|IPR004664%2C (GO:0004540)). Contains Conserved hypothetical protein 766 (Interpro|IPR005274) gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3348 YP_3349 YP3349 cdh cdh 3749326 3750123 + CDP-diacylglycerol phosphotidylhydrolase similar to Yersinia pestis KIM cdh. Contains CDP-diacylglycerol pyrophosphatase (Interpro|IPR003763%2C (GO:0008654)%2C (GO:0016020)) gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3349 YP_3350 YP3350 asmA2 asmA2 3750100 3752316 - Uncharacterized protein involved in outer membrane biogenesis similar to Yersinia pestis KIM y3842. Contains Pollen allergen Poa pIX/Phl pVI%2C C-terminal (Interpro|IPR001778) gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3350 YP_3351 YP3351 rtn3 rtn3 3752621 3753466 - EAL domain similar to Yersinia pestis KIM y3841. Contains EAL domain (Interpro|IPR001633%2C (GO:0005554)) gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3351 YP_3352 YP3352 YP_3352 3753550 3753885 + Uncharacterized protein%2C like 4-oxalocrotonate tautomerase similar to Yersinia pestis KIM y3839. Contains 4-oxalocrotonate tautomerase (Interpro|IPR004370%2C (GO:0006725)%2C (GO:0016853)) gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3352 YP_3353 YP3353 kdgK kdgK 3754164 3755108 + 2-dehydro-3-deoxygluconokinase similar to Yersinia pestis CO92 kdgK and Yersinia pestis KIM kdgK. Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173) gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3353 YP_3354 YP3354 pqqL pqqL 3755272 3756771 - putative insulinase family protease similar to Yersinia pestis CO92 YPO3991 and Yersinia pestis KIM y3837. Contains Insulinase-like peptidase%2C family M16 (Interpro|IPR001431%2C (GO:0006508)) gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3354 YP_3355 YP3355 dctA dctA 3757136 3758425 - C4-dicarboxylate transport protein similar to Yersinia pestis CO92 dctA and Yersinia pestis KIM dctA. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)) gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3355 YP_3356 YP3356 YP_3356 3758880 3759386 - putative exported protein similar to Yersinia pestis CO92 YPO3993 and Yersinia pestis KIM y3835. Contains Coagulation factor 5/8 type C domain (FA58C) (Interpro|IPR000421%2C (GO:0007155)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3356 YP_3357 YP3357 pelY pelY 3759484 3761202 - periplasmic pectate lyase precursor similar to Yersinia pestis CO92 pelY and Yersinia pestis KIM y3834 gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3357 YP_3358 YP3358 YP_3358 3761448 3762152 - putative exported protein similar to Yersinia pestis CO92 YPO3995 and Yersinia pestis KIM y3833 gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3358 YP_3359 YP3359 rtn4 rtn4 3762792 3764807 - putative membrane protein similar to Yersinia pestis CO92 YPO3996 and Yersinia pestis KIM y3832. Contains GGDEF (Interpro|IPR000160%2C (GO:0005554)). Contains EAL domain (Interpro|IPR001633%2C (GO:0005554)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)) gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3359 YP_3360 YP3360 YP_3360 3765121 3766235 - similar to gi|16766903|ref|NP_462518.1| endo-1%2C4-D-glucanase [Salmonella typhimurium LT2] (369 aa). There is a frameshift after codon 63. The sequence has been checked and believed tobe correct. Contains Glycoside hydrolase%2C family 8 (Interpro|IPR002037%2C (GO:0005975)) pseudogene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3360 YP_3361 YP3361 dppF dppF 3766339 3767415 - dipeptide transport ATP-binding protein similar to Yersinia pestis CO92 dppF and Yersinia pestis KIM dppF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3361 YP_3362 YP3362 dppD3 dppD3 3767412 3768392 - dipeptide transport ATP-binding protein similar to Yersinia pestis CO92 dppD. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3362 YP_3363 YP3363 dppC4 dppC4 3768406 3769308 - dipeptide transport system permease protein similar to Yersinia pestis CO92 dppC and Yersinia pestis KIM dppC. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3363 YP_3364 YP3364 dppB4 dppB4 3769390 3770337 - dipeptide transport system permease protein similar to Yersinia pestis CO92 dppB and Yersinia pestis KIM dppB. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3364 YP_3365 YP3365 dppA dppA 3770620 3772227 - periplasmic dipeptide transport protein similar to Yersinia pestis CO92 dppA and Yersinia pestis KIM dppA. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)) gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3365 YP_3366 YP3366 YP_3366 3772630 3772878 - hypothetical protein similar to Yersinia pestis CO92 YPO4004 gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3366 YP_3367 YP3367 fhaC4 fhaC4 3772896 3774659 - putative hemolysin activator protein similar Yersinia pestis CO92 YPO4005 and similar to Yersinia pestis KIM y3824(residues 1 to 587 of 587 are similar to residues 9 to 595 of 595 from Yersinia pestis KIM y3824). Contains Hemolysin activator HlyB (Interpro|IPR005565) gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3367 YP_3368 YP3368 fhaB4 fhaB4 3774768 3776159 - putative exported protein similar to Yersinia pestis CO92 YPO4006 and Yersinia pestis KIM y3823 gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3368 YP_3369 YP3369 uhpC uhpC 3776665 3778026 - putative regulatory protein similar to Yersinia pestis CO92 uhpC and Yersinia pestis KIM uhpC. Contains GlpT transporter (Interpro|IPR000849%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3369 YP_3370 YP3370 YP_3370 3778091 3779620 - Signal transduction histidine kinase%2C glucose-6-phosphate specific Best Blastp hit %3D gi|22127902|ref|NP_671325.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|21961039|gb|AAM87576.1|AE014004_14 (AE014004) hypothetical [Yersinia pestis KIM]%2C(len:266 aa)%3B. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3370 YP_3371 YP3371 uhpA2 uhpA2 3779617 3780390 - response regulator similar to Yersinia pestis KIM uhpA. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)) gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3371 YP_3372 YP3372 YP_3372 3780323 3782014 - putative membrane protein similar to Yersinia pestis CO92 YPO4013 and Yersinia pestis KIM y4034. Contains Protein of unknown function DUF146 (Interpro|IPR003371) gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3372 YP_3374 YP3374 pldB3 pldB3 3782543 3784006 - putative membrane protein similar to Yersinia pestis CO92 YPO4014 and Yersinia pestis KIM y4035. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)) gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3374 YP_3376 YP3376 YP_3376 3784474 3787851 - similar to Yersinia pestis CO92 YPO4015 and Yersinia pestis KIM proY%3B disrupted by IS100 element pseudogene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3376 YP_3377 YP3377 dnaC_26 dnaC_26 3785799 3786578 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3377 YP_3378 YP3378 YP_3378 3786578 3787600 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3378 YP_3379 YP3379 hutH hutH 3788254 3789786 - histidine ammonia-lyase similar to Yersinia pestis CO92 hutH and Yersinia pestis KIM y4037. Contains Lipocalin-related protein and Bos/Can/Equ allergen (Interpro|IPR000566%2C (GO:0006810)). Contains Phenylalanine/histidine ammonia-lyase (Interpro|IPR001106%2C (GO:0009058)%2C (GO:0016211)). Contains Histidine ammonia-lyase (Interpro|IPR005921%2C (GO:0006548)) gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3379 YP_3380 YP3380 hutU hutU 3789783 3791489 - urocanate hydratase similar to Yersinia pestis CO92 hutU and Yersinia pestis KIM y4038. Contains Urocanase (Interpro|IPR000193%2C (GO:0006548)%2C (GO:0016153)) gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3380 YP_3381 YP3381 cysM2 cysM2 3792138 3793145 + pyridoxal-phosphate dependent protein similar to Yersinia pestis CO92 cysM and Yersinia pestis KIM cysK. Contains Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site (Interpro|IPR001216%2C (GO:0006535)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)). Contains Cysteine synthase K/M (Interpro|IPR005856%2C (GO:0006535)). Contains Cysteine synthase M (Interpro|IPR005858%2C (GO:0006535)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)) gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3381 YP_3382 YP3382 apt2 apt2 3793142 3793708 + putative phosphoribosyl transferase protein similar to Yersinia pestis CO92 YPO4019 and Yersinia pestis KIM apt. Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)). Contains Purine/pyrimidine phosphoribosyl transferase (Interpro|IPR002375). Contains Adenine phosphoribosyl transferase (Interpro|IPR005764%2C (GO:0006168)). Contains Phosphoribosyltransferase (Interpro|IPR000836%2C (GO:0009116)) gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3382 YP_3383 YP3383 rhaT14 rhaT14 3793791 3794720 + putative membrane protein similar to Yersinia pestis CO92 YPO4020 and Yersinia pestis KIM y4041. Contains Protein of unknown function DUF6 (Interpro|IPR000620). Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)) gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3383 YP_3384 YP3384 accC1 accC1 3794692 3795966 + Biotin carboxylase similar to Yersinia pestis CO92 YPO4021 and Yersinia pestis KIM y4042. gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3384 YP_3385 YP3385 fecB3 fecB3 3796453 3797442 + putative solute-binding iron ABC transport protein similar to Yersinia pestis KIM y4043. Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3385 YP_3386 YP3386 btuC3 btuC3 3797452 3798411 + putative iron transport permease similar to Yersinia pestis CO92 YPO4023 and Yersinia pestis KIM y4044. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)). Contains Blood group Rhesus C/E and D polypeptide (Interpro|IPR002229) gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3386 YP_3387 YP3387 btuC4 btuC4 3798383 3799408 + putative iron transport permease similar to Yersinia pestis CO92 YPO4024 and Yersinia pestis KIM y4045. Contains FecCD transport family (Interpro|IPR000522%2C (GO:0016020)) gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3387 YP_3388 YP3388 fecE fecE 3799405 3800163 + putative iron ABC transporter%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4025 and Yersinia pestis KIM fecE. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3388 YP_3389 YP3389 YP_3389 3800160 3800723 - similar to Yersinia pestis CO92 YPO4026 and Yersinia pestis KIM y4047. pseudogene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3389 YP_3390 YP3390 YP_3390 3800896 3801081 - hypothetical protein similar to Yersinia pestis KIM y4048 gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3390 YP_3391 YP3391 hipB3 hipB3 3802037 3802399 + putative regulator similar to Yersinia pestis CO92 YPO4028 and Yersinia pestis KIM y4049. Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)) gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3391 YP_3392 YP3392 YP_3392 3802438 3803370 + similar to many transponase entries%2C such as |21233832|ref|NP_640130.1|transposase [Proteus vulgaris](307aa). This CDS Contains several frameshifts%2C and it seems to be a degenerate CDS. . Contains Transposase%2C IS4 (Interpro|IPR002559) pseudogene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3392 YP_3393 YP3393 YP_3393 3803544 3803789 + putative regulatory protein similar to Yersinia pestis CO92 YPO4031 gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3393 YP_3394 YP3394 YP_3394 3804057 3805529 - hypothetical protein similar to Yersinia pestis CO92 YPO4032 and Yersinia pestis KIM y4051. gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3394 YP_3395 YP3395 xerC4 xerC4 3805423 3806616 - putative phage integrase similar to Yersinia pestis CO92 YPO4033 and Yersinia pestis KIM y4052. Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)) gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3395 YP_3396 YP3396 purR11 purR11 3807002 3808195 - putative AraC-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO4034 and Yersinia pestis KIM xylR. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3396 YP_3397 YP3397 araH12 araH12 3808285 3809469 - sugar transport system permease protein similar to Yersinia pestis CO92 YPO4035. Contains Polycystic kidney disease type 1 protein (Interpro|IPR000434). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3397 YP_3398 YP3398 mglA7 mglA7 3809456 3810988 - sugar transport ATP-binding protein similar to Yersinia pestis CO92 YPO4036 and Yersinia pestis KIM xylG. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3398 YP_3399 YP3399 xylF xylF 3811196 3812191 - sugar-binding periplasmic protein similar to Yersinia pestis CO92 YPO4037 and Yersinia pestis KIM xylF. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3399 YP_3400 YP3400 xylA xylA 3812654 3813973 + xylose isomerase similar to Yersinia pestis CO92 xylA and Yersinia pestis KIM xylA. Contains Xylose isomerase (Interpro|IPR001998%2C (GO:0005975)%2C (GO:0009045)) gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3400 YP_3401 YP3401 xylB2 xylB2 3814097 3815551 + xylulose kinase similar to Yersinia pestis CO92 xylB. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains Heat shock protein Hsp70 (Interpro|IPR001023). Contains Xylulokinase (Interpro|IPR006000%2C (GO:0005997)) gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3401 YP_3402 YP3402 YP_3402 3815669 3816655 - putative exported protein similar to Yersinia pestis CO92 YPO4040 and Yersinia pestis KIM y4059 gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3402 YP_3403 YP3403 fimC10 fimC10 3816694 3817521 - putative fimbrial chaperone similar to Yersinia pestis CO92 YPO4041 and Yersinia pestis KIM y4060. Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C (GO:0030288)) gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3403 YP_3404 YP3404 fimD6 fimD6 3817554 3818189 - putative outer membrane usher protein similar to Yersinia pestis KIM y4061. gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3404 YP_3405 YP3405 fimD7 fimD7 3818215 3820044 - putative membrane protein similar to Yersinia pestis KIM y4062. Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C (GO:0016020)) gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3405 YP_3406 YP3406 fimA7 fimA7 3820120 3820764 - fimbrial protein similar to Yersinia pestis CO92 YPO4044 and Yersinia pestis KIM y4063. Contains Fimbrial protein (Interpro|IPR000259%2C (GO:0009289)) gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3406 YP_3407 YP3407 YP_3407 3821559 3822551 - putative membrane protein similar to Yersinia pestis CO92 YPO4045 and Yersinia pestis KIM y4064. Contains Inhibin%2C beta C subunit (Interpro|IPR001318%2C (GO:0016916)). Contains Acyltransferase 3 family (Interpro|IPR002656) gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3407 YP_3408 YP3408 YP_3408 3822755 3823429 + putative transposase similar to Yersinia pestis KIM y4065 gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3408 YP_3409 YP3409 tra5G tra5G 3823483 3824268 + transposase for insertion sequence IS1661 similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3409 YP_3410 YP3410 rtn5 rtn5 3824464 3826830 - putative membrane protein similar to Yersinia pestis CO92 YPO0998 and Yersinia pestis KIM y3389. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains GGDEF (Interpro|IPR000160%2C (GO:0005554)). Contains PAC motif (Interpro|IPR001610%2C (GO:0007165)). Contains EAL domain (Interpro|IPR001633%2C (GO:0005554)) gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3410 YP_3411 YP3411 acrA9 acrA9 3827470 3828747 + putative drug efflux protein similar to Yersinia pestis CO92 YPO1000 and Yersinia pestis KIM y3392. Contains Gram-negative bacterial RTX secretion protein D (Interpro|IPR003997%2C (GO:0009306)%2C (GO:0016020)). Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3411 YP_3412 YP3412 acrF acrF 3828760 3831879 + putative integral membrane efflux protein similar to Yersinia pestis CO92 YPO1001 and Yersinia pestis KIM acrF. Contains Sterol-sensing 5TM box (Interpro|IPR000731). Contains Acriflavin resistance protein (Interpro|IPR001036). Contains Hydrophobe/amphiphile efflux-1 HAE1 (Interpro|IPR004764%2C (GO:0016021)) gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3412 YP_3413 YP3413 senA senA 3832014 3833504 - enterotoxin-like protein similar to Yersinia pestis CO92 YPO1002 and Yersinia pestis KIM senA gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3413 YP_3414 YP3414 YP_3414 3833782 3834369 + putative exported protein similar to Yersinia pestis CO92 YPO1003 and Yersinia pestis KIM y3395. gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3414 YP_3415 YP3415 yapH yapH 3835208 3846340 + putative autotransporter protein similar to Yersinia pestis CO92 yapH and Yersinia pestis KIM yapH. Contains Pertactin domain (Interpro|IPR004899). Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3415 YP_3416 YP3416 YP_3416 3846443 3848323 - putative antigenic leucine-rich repeat protein similar to Yersinia pestis CO92 YPO1005 and Yersinia pestis KIM y3397. Contains Leucine-rich repeat (Interpro|IPR001611) gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3416 YP_3417 YP3417 YP_3417 3848886 3849761 - putative antigenic leucine-rich repeat protein similar to Yersinia pestis CO92 YPO1006 and Yersinia pestis KIM y3399. Contains Leucine-rich repeat (Interpro|IPR001611) gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3417 YP_3418 YP3418 YP_3418 3849970 3851787 - putative antigenic leucine-rich repeat protein similar to Yersinia pestis CO92 YPO1007 and Yersinia pestis KIM y3400. Contains Leucine-rich repeat (Interpro|IPR001611) gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3418 YP_3420 YP3420 abgT abgT 3852506 3854062 + putative integral membrane efflux protein similar to Yersinia pestis CO92 YPO1008. Contains AbgT putative transporter family (Interpro|IPR004697%2C (GO:0016021)) gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3420 YP_3421 YP3421 pepD2 pepD2 3854453 3855685 + putative peptidase similar to Yersinia pestis CO92 YPO1009 and Yersinia pestis KIM y3403. Contains Peptidase M20/M25/M40 (Interpro|IPR002933%2C (GO:0006508)%2C (GO:0008237)) gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3421 YP_3422 YP3422 cirA4 cirA4 3856073 3858145 + putative TonB-dependent outer membrane receptor similar to Yersinia pestis CO92 YPO1011. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3422 YP_3423 YP3423 entF1 entF1 3858296 3868231 + putative siderophore biosysnthesis protein Best Blastp hit %3D gi|16121091|ref|NP_404404.1| (NC_003143) putative siderophore biosysnthesis protein [Yersinia pestis]%2C gi|15978856|emb|CAC89627.1| (AJ414144) putative siderophore biosysnthesis protein [Yersinia pestis]%2C(len:2201 aa)%3B. Contains Beta-ketoacyl synthase (Interpro|IPR000794%2C (GO:0006633)). Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)). Contains Condensation domain (Interpro|IPR001242%2C (GO:0005554)). Contains Phosphopantetheine attachment site (Interpro|IPR006162). Contains Phosphopantetheine-binding domain (Interpro|IPR006163) gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3423 YP_3424 YP3424 entF2 entF2 3868275 3869927 + putative siderophore biosysnthesis protein similar to Yersinia pestis CO92 YPO0777 and Yersinia pestis KIM y3412. Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)). Contains Phosphopantetheine-binding domain (Interpro|IPR006163) gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3424 YP_3425 YP3425 entF3 entF3 3869940 3875768 + putative siderophore biosysnthesis protein similar to Yersinia pestis CO92 YPO0776. gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3425 YP_3426 YP3426 fabG11 fabG11 3875747 3876835 + Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) similar to Yersinia pestis CO92 YPO0775 and Yersinia pestis KIM y3418. Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3426 YP_3427 YP3427 YP_3427 3876832 3877959 + hypothetical protein similar to Yersinia pestis CO92 YPO0774 and Yersinia pestis KIM y3419 gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3427 YP_3428 YP3428 grsT grsT 3877949 3878716 + putative thioesterase similar to Yersinia pestis CO92 YPO0773 and Yersinia pestis KIM y3420. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Thioesterase (Interpro|IPR001031%2C (GO:0009058)%2C (GO:0016788)) gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3428 YP_3429 YP3429 proP29 proP29 3878664 3880010 + putative membrane protein similar to Yersinia pestis CO92 YPO0772 and Yersinia pestis KIM y3421. Contains Cl- channel%2C voltage gated (Interpro|IPR001807%2C (GO:0016020)) gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3429 YP_3430 YP3430 mdlB5 mdlB5 3880010 3881782 + ABC-transporter transmembrane protein similar to Yersinia pestis CO92 YPO0771 and Yersinia pestis KIM y3422. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3430 YP_3431 YP3431 mdlB6 mdlB6 3881757 3883532 + ATP-binding protein similar to Yersinia pestis KIM y3423. Contains ABC transporter%2C transmembrane region (Interpro|IPR001140%2C (GO:0016020)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3431 YP_3432 YP3432 YP_3432 3883855 3884730 - putative exported protein similar to Yersinia pestis CO92 YPO0769 and Yersinia pestis KIM y3424 gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3432 YP_3433 YP3433 YP_3433 3885166 3885564 - hypothetical protein similar to Yersinia pestis CO92 YPO0768 and Yersinia pestis KIM y3425 gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3433 YP_3434 YP3434 gntP gntP 3887104 3888447 + putative gluconate transporter similar to Yersinia pestis CO92 gntP and Yersinia pestis KIM gntP. Contains Tetracycline resistance protein TetB (Interpro|IPR001411%2C (GO:0016021)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Gluconate transporter (Interpro|IPR003474%2C (GO:0016020)). Contains Phosphopantetheine attachment site (Interpro|IPR006162) gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3434 YP_3435 YP3435 YP_3435 3889448 3893211 + This CDS is similar to YPO0765 (pseudogene for putative adhesin) of Yersinia pestis CO92 at DNA level. similar to to Yersinia pestis protein YapD TR:CAC14223 (EMBL:AJ277627) (1457 aa). There is a frameshift after codon 552. The sequence has been checked and is believed to be correct. Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) pseudogene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3435 YP_3436 YP3436 YP_3436 3893867 3897637 + putative virG protein similar to Yersinia pestis KIM y3429. Contains Autotransporter beta-domain (Interpro|IPR005546). Contains Outer membrane autotransporter barrel (Interpro|IPR006315) gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3436 YP_3437 YP3437 YP_3437 3898223 3900448 + hypothetical protein similar to Yersinia pestis CO92 YPO0764 and Yersinia pestis KIM y3430. Contains Rhs element Vgr protein (Interpro|IPR006533) gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3437 YP_3438 YP3438 YP_3438 3900453 3901793 + hypothetical protein similar to Yersinia pestis CO92 YPO0763 and Yersinia pestis KIM y3431. gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3438 YP_3439 YP3439 rhsA2 rhsA2 3901807 3906123 + Rhs family protein similar to Yersinia pestis CO92 YPO0762. Contains MIP family (Interpro|IPR000425%2C (GO:0016020)). Contains YD repeat (Interpro|IPR006530) gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3439 YP_3440 YP3440 YP_3440 3906406 3906648 + hypothetical protein similar to Yersinia pestis CO92 YPO0761 and Yersinia pestis KIM y3433 gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3440 YP_3441 YP3441 cysK3 cysK3 3907192 3907605 + putative membrane protein similar to Yersinia pestis CO92 YPO0760 and Yersinia pestis KIM y3434 gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3441 YP_3442 YP3442 citT3 citT3 3907785 3909164 - Di- and tricarboxylate transporters similar to Yersinia pestis KIM y3435. Contains H+-transporting two-sector ATPase%2C A subunit (Interpro|IPR000568%2C (GO:0016020)). Contains Sodium/sulphate symporter (Interpro|IPR001898%2C (GO:0016020)) gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3442 YP_3443 YP3443 cytR2 cytR2 3909446 3910465 - putative transcription repressor similar to Yersinia pestis KIM cytR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761). Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3443 YP_3444 YP3444 YP_3444 3910747 3911832 + hypothetical protein similar to Yersinia pestis KIM y3438. Contains Glycoside hydrolase%2C family 5 (Interpro|IPR001547%2C (GO:0005975)) gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3444 YP_3445 YP3445 melB2 melB2 3911985 3913418 + Sodium:galactoside symporter family protein similar to Yersinia pestis CO92 YPO0995 and Yersinia pestis KIM y3386. Contains Sodium:galactoside symporter (Interpro|IPR001927%2C (GO:0016020)) gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3445 YP_3446 YP3446 iutA iutA 3913677 3915857 - putative ferric siderophore receptor similar to Yersinia pestis CO92 iutA and Yersinia pestis KIM iutA. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3446 YP_3447 YP3447 iucD iucD 3915929 3917257 - putative siderophore biosynthesis protein IucD similar to Yersinia pestis CO92 iucD and Yersinia pestis KIM iucD. Contains Flavin-containing monooxygenase FMO (Interpro|IPR000960%2C (GO:0006118)). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)) gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3447 YP_3448 YP3448 iucC iucC 3917254 3919002 - putative siderophore biosynthesis protein IucC similar to Yersinia pestis CO92 iucC and Yersinia pestis KIM iucC gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3448 YP_3449 YP3449 iucB iucB 3918999 3919949 - putative siderophore biosynthesis protein IucB similar to Yersinia pestis CO92 iucB and Yersinia pestis KIM iucB gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3449 YP_3450 YP3450 iucA iucA 3919933 3921704 - similar to Escherichia coli aerobactin siderophore biosynthesis protein IucA SW:IUCA_ECOLI (Q47316) (575 aa) and to Shigella flexneri SHI-2 pathogenicity island protein IucA TR:Q9XCH4 (EMBL:AF141323) (593 aa). There is a frameshift after codon 180. The sequence has been checked and is believed to be correct. pseudogene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3450 YP_3451 YP3451 proP30 proP30 3921844 3923067 + putative membrane protein similar to Yersinia pestis CO92 YPO0988 gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3451 YP_3452 YP3452 YP_3452 3923357 3924190 - putative exported protein similar to Yersinia pestis CO92 YPO0987 and Yersinia pestis KIM y3377. Contains Intradiol ring-cleavage dioxygenase (Interpro|IPR000627%2C (GO:0008199)) gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3452 YP_3453 YP3453 dAP2 dAP2 3924567 3925943 - putative exported protein similar to Yersinia pestis CO92 YPO0986 and Yersinia pestis KIM y3376. Contains Esterase/lipase/thioesterase%2C active site (Interpro|IPR000379%2C (GO:0003824)). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311) gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3453 YP_3454 YP3454 yspR yspR 3926511 3927254 + quorum-sensing transcriptional regulator similar to Yersinia pestis CO92 yspR and Yersinia pestis KIM ytbR. Contains Bacterial regulatory protein%2C LuxR family (Interpro|IPR000792%2C (GO:0006355)). Contains Autoinducer binding domain (Interpro|IPR005143) gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3454 YP_3455 YP3455 yspI yspI 3927235 3927885 - N-acylhomoserine lactone synthase YspI similar to Yersinia pestis CO92 yspI and Yersinia pestis KIM ytbI. Contains Autoinducer synthesis protein (Interpro|IPR001690%2C (GO:0007165)) gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3455 YP_3456 YP3456 YP_3456 3929055 3929705 + putative membrane protein similar to Yersinia pestis CO92 YPO0983 and Yersinia pestis KIM y3373. Contains Abortive infection protein (Interpro|IPR003675) gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3456 YP_3457 YP3457 YP_3457 3930156 3930551 + putative lipoprotein similar to Yersinia pestis CO92 YPO0982 and Yersinia pestis KIM y3371 gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3457 YP_3458 YP3458 insA1 insA1 3930613 3930882 + insertion element protein similar to Yersinia pestis CO92 insA. gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3458 YP_3459 YP3459 YP_3459 3930813 3930980 + len: 55 aa%3B Best Blastp hit %3D gi|12484147|gb|AAG53990.1|AF327446_2 (AF327446) putative transposase B [Pantoea agglomerans]%2C(len:168 aa) pseudogene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3459 YP_3460 YP3460 YP_3460 3931056 3931427 + hypothetical protein similar to Yersinia pestis KIM y3370 gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3460 YP_3461 YP3461 YP_3461 3932824 3933327 + hypothetical protein similar to Yersinia pestis CO92 YPO0978 and Yersinia pestis KIM y3369. gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3461 YP_3462 YP3462 YP_3462 3933370 3934920 + hypothetical protein similar to Yersinia pestis CO92 YPO1466 gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3462 YP_3463 YP3463 YP_3463 3934932 3936284 + hypothetical protein similar to Yersinia pestis CO92 YPO1467 gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3463 YP_3464 YP3464 YP_3464 3936281 3936967 + putative membrane protein similar to Yersinia pestis CO92 YPO1468 and Yersinia pestis KIM y3366. Contains Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin (Interpro|IPR001248%2C (GO:0016020)) gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3464 YP_3465 YP3465 ompA4 ompA4 3936967 3938703 + putative OmpA-family membrane protein similar to Yersinia pestis CO92 YPO0974 and Yersinia pestis KIM y3365. Contains Proline-rich region (Interpro|IPR000694). Contains Bacterial outer membrane protein (Interpro|IPR006664). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3465 YP_3466 YP3466 hcp8 hcp8 3938707 3939198 + Hemolysin-coregulated protein (uncharacterized) similar to Yersinia pestis CO92 YPO1470 and Yersinia pestis KIM y3363 gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3466 YP_3467 YP3467 clpB3 clpB3 3939616 3942264 + Clp ATPase similar to Yersinia pestis CO92 clpB3 and Yersinia pestis KIM clpB. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)) gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3467 YP_3468 YP3468 vgrG4 vgrG4 3942261 3944609 + hypothetical protein similar to Yersinia pestis CO92 YPO0970 and Yersinia pestis KIM y3361. Contains Rhs element Vgr protein (Interpro|IPR006533) gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3468 YP_3469 YP3469 YP_3469 3944624 3946846 + hypothetical protein similar to Yersinia pestis CO92 YPO0969 and Yersinia pestis KIM y3360 gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3469 YP_3470 YP3470 YP_3470 3946847 3947347 + hypothetical protein Best Blastp hit %3D gi|22127235|ref|NP_670658.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|21960305|gb|AAM86909.1|AE013937_5 (AE013937) hypothetical [Yersinia pestis KIM]%2C(len:129 aa) gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3470 YP_3471 YP3471 YP_3471 3947531 3947725 + hypothetical protein no significant database match found gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3471 YP_3472 YP3472 YP_3472 3947751 3948029 + insertion sequence protein similar to Yersinia pestis CO92 YPO0968 and Yersinia pestis KIM y3351. Contains Insertion element protein (Interpro|IPR003220%2C (GO:0006313)) gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3472 YP_3473 YP3473 YP_3473 3948083 3948418 + similar to Yersinia pestis KIM y3356 and Yersinia pestis CO92 YPO0967a. . Contains IS1 transposase (Interpro|IPR005063%2C (GO:0006313)) pseudogene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3473 YP_3474 YP3474 mdlB7 mdlB7 3948950 3949585 + ABC-type multidrug/protein/lipid transport system%2C ATPase component similar to Yersinia pestis CO92 YPO0967 and Yersinia pestis KIM y3354 gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3474 YP_3475 YP3475 YP_3475 3949601 3951898 + putative kinase similar to Yersinia pestis CO92 YPO0966 and Yersinia pestis KIM y3353. Contains Protein kinase (Interpro|IPR000719%2C (GO:0006468)) gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3475 YP_3476 YP3476 YP_3476 3951885 3952652 + hypothetical protein similar to Yersinia pestis KIM y3352 gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3476 YP_3477 YP3477 insA2 insA2 3952745 3953023 + insertion sequence protein similar to Yersinia pestis CO92 insA and Yersinia pestis KIM y3351. Contains Insertion element protein (Interpro|IPR003220%2C (GO:0006313)). Contains Insertion element protein (Interpro|IPR003220%2C (GO:0006313)) gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3477 YP_3478 YP3478 insB insB 3953077 3953445 + putative transposase similar to Yersinia pestis KIM y3350. Contains IS1 transposase (Interpro|IPR005063%2C (GO:0006313)) gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3478 YP_3479 YP3479 YP_3479 3954053 3954681 + similar to Yersinia pestis CO92 YPO0962 and Yersinia pestis KIM y3349. Note there is a frameshift mutation following codon 58. The sequence has been checked and is believed to be correct. pseudogene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3479 YP_3480 YP3480 YP_3480 3954705 3955013 + similar to Yersinia pestis CO92 YPO0961. pseudogene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3480 YP_3481 YP3481 speC speC 3956010 3958172 + ornithine decarboxylase similar to Yersinia pestis CO92 speC and Yersinia pestis KIM speC. Contains Orn/Lys/Arg decarboxylase%2C family 1 (Interpro|IPR000310%2C (GO:0003824)). Contains Orn/Lys/Arg decarboxylase%2C N-terminal domain (Interpro|IPR005308%2C (GO:0016831)) gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3481 YP_3482 YP3482 rbsB10 rbsB10 3958728 3959687 + putative sugar ABC transporter periplasmicbinding protein similar to Yersinia pestis CO92 YPO0959 and Yersinia pestis KIM y3346. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3482 YP_3483 YP3483 mglA8 mglA8 3959733 3961232 + galactoside transport ATP-binding protein similar to Yersinia pestis CO92 mglA and Yersinia pestis KIM y3345. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3483 YP_3484 YP3484 araH13 araH13 3961229 3962248 + putative sugar transport system permeaseprotein similar to Yersinia pestis CO92 YPO0957 and Yersinia pestis KIM y3344. Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3484 YP_3485 YP3485 cirA5 cirA5 3962331 3964475 - putative hydroxamate-type ferrisiderophore receptor similar to Yersinia pestis CO92 YPO0956 and Yersinia pestis KIM y3343. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)). Contains NADH:cytochrome b5 reductase (CBR) (Interpro|IPR001834%2C (GO:0006118)%2C (GO:0008246)) gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3485 YP_3486 YP3486 fecB4 fecB4 3964468 3965439 - ABC-type cobalamin/Fe3+-siderophores transport systems%2C periplasmic components similar to Yersinia pestis CO92 YPO0955. Contains Periplasmic binding protein (Interpro|IPR002491%2C (GO:0006827)) gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3486 YP_3487 YP3487 mltC mltC 3965868 3966956 - membrane-bound lytic murein transglycosylase C similar to Yersinia pestis CO92 mltC and Yersinia pestis KIM mltC. Contains SLT domain (Interpro|IPR000189) gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3487 YP_3488 YP3488 YP_3488 3967127 3967399 - hypothetical protein similar to Yersinia pestis CO92 YPO0953 and Yersinia pestis KIM y3340. gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3488 YP_3489 YP3489 mutY mutY 3967577 3968824 - A/G-specific adenine glycosylase similar to Yersinia pestis CO92 mutY and Yersinia pestis KIM mutY. Contains Helix-hairpin-helix motif (Interpro|IPR000445%2C (GO:0003677)). Contains HhH-GPD (Interpro|IPR003265%2C (GO:0006284)). Contains Iron-sulfur cluster loop (Interpro|IPR003651%2C (GO:0005506)). Contains Endonuclease III%2C FCL (Interpro|IPR004035%2C (GO:0006281)). Contains Endonuclease III%2C HhH (Interpro|IPR004036%2C (GO:0006281)). Contains A/G-specific adenine glycosylase MutY (Interpro|IPR005760%2C Cellular Component: intracellular (GO:0005622)%2C (GO:0006284)%2C (GO:0019104)) gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3489 YP_3490 YP3490 YP_3490 3969030 3969749 + Putative methyltransferase similar to Yersinia pestis CO92 YPO0951 and Yersinia pestis KIM y3338. Contains Putative methyltransferase (Interpro|IPR003358). Contains Conserved hypothetical protein 91 (Interpro|IPR004395%2C (GO:0008168)) gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3490 YP_3491 YP3491 YP_3491 3969749 3970075 + hypothetical protein similar to Yersinia pestis CO92 YPO0950 and Yersinia pestis KIM y3337 gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3491 YP_3492 YP3492 glsA2 glsA2 3970186 3971112 + putative glutaminase similar to Yersinia pestis CO92 YPO0949 and Yersinia pestis KIM y3336. Contains Glutaminase (Interpro|IPR007043) gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3492 YP_3493 YP3493 YP_3493 3971179 3971957 + similar to Escherichia coli hypothetical protein YggN SW:YGGN_ECOLI (P46143) (239 aa)%2C and to Vibrio cholerae hypothetical protein VC2286 TR:Q9KPS6 (EMBL:AE004299) (256 aa). Contains a frameshift after codon 166.The sequence has been checked and is believed to be correct. Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230) pseudogene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3493 YP_3494 YP3494 YP_3494 3972453 3981785 + putative virulence determinant similar to Yersinia pestis CO92 YPO0947 and Yersinia pestis KIM y3333. Contains Integrins alpha chain (Interpro|IPR000413%2C (GO:0008305)). Contains Hemolysin-type calcium-binding region (Interpro|IPR001343%2C (GO:0005509)). Contains Bacterial RTX cytolytic toxin%2C protein A (Interpro|IPR003995%2C Cellular Component: extracellular (GO:0005576)%2C (GO:0009405)%2C (GO:0015484)). Contains RTX (repeat in structural toxin) (Interpro|IPR006661) gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3494 YP_3495 YP3495 YP_3495 3981900 3983108 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3495 YP_3496 YP3496 hemN2 hemN2 3983298 3984440 - putative oxidase similar to Yersinia pestis KIM y3332. Contains Putative oxygen-independent coproporphyrinogen III oxidase (Interpro|IPR004559%2C (GO:0006779)). Contains Elongator protein 3/MiaB/NifB (Interpro|IPR006638) gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3496 YP_3497 YP3497 YP_3497 3984421 3985092 - Xanthosine triphosphate pyrophosphatase similar to Yersinia pestis CO92 YPO0945 and Yersinia pestis KIM y3331. Contains Ham1-like protein (Interpro|IPR002637) gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3497 YP_3498 YP3498 YP_3498 3985114 3985416 - hypothetical protein similar to Yersinia pestis CO92 YPO0944 and Yersinia pestis KIM y3330. Contains Protein of unknown function DUF167 (Interpro|IPR003746). Contains Conserved hypothetical protein 251 (Interpro|IPR005228) gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3498 YP_3499 YP3499 YP_3499 3985401 3985955 - putative membrane protein similar to Yersinia pestis CO92 YPO0943 and Yersinia pestis KIM y3329. Contains Family of unknown function YGGT (Interpro|IPR003425) gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3499 YP_3500 YP3500 proC proC 3986243 3987064 - putative pyrroline-5-carboxylate reductase similar to Yersinia pestis CO92 proC and Yersinia pestis KIM proC. Contains Delta 1-pyrroline-5-carboxylate reductase (Interpro|IPR000304%2C (GO:0006561)). Contains Protein kinase (Interpro|IPR000719%2C (GO:0006468)) gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3500 YP_3501 YP3501 YP_3501 3987197 3987925 - putative enzyme with a TIM-barrel fold similar to Yersinia pestis CO92 YPO0941 and Yersinia pestis KIM y3327. Contains Protein of unknown function UPF0001 (Interpro|IPR001608) gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3501 YP_3502 YP3502 YP_3502 3987909 3989039 + putative ATPases involved in pili biogenesis%2C PilT homologs similar to Yersinia pestis CO92 YPO0940 and Yersinia pestis KIM y3326. Contains Bacterial type II secretion system protein E (Interpro|IPR001482%2C (GO:0006810)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Pilus retraction protein PilT (Interpro|IPR006321) gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3502 YP_3503 YP3503 YP_3503 3989148 3990263 - Peptidylarginine deiminase-related enzymes similar to Yersinia pestis CO92 YPO0939 gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3503 YP_3504 YP3504 YP_3504 3990267 3991151 - putative carbon-nitrogen hydrolase similar to Yersinia pestis CO92 YPO0938 and Yersinia pestis KIM y3324. Contains Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (Interpro|IPR003010%2C (GO:0006807)%2C (GO:0016810)) gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3504 YP_3505 YP3505 YP_3505 3991331 3991753 - putative endonuclease involved in recombination similar to Yersinia pestis CO92 YPO0937 and Yersinia pestis KIM y3323. Contains Conserved hypothetical protein 250 (Interpro|IPR005227). Contains Ribonuclease RNase H fold containing (Interpro|IPR006641) gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3505 YP_3506 YP3506 YP_3506 3991753 3992418 - Putative transcriptional regulator similar to Yersinia pestis CO92 YPO0936 and Yersinia pestis KIM y3322. Contains Protein of unknown function DUF179 (Interpro|IPR003774) gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3506 YP_3507 YP3507 gshB gshB 3992432 3993391 - glutathione synthetase similar to Yersinia pestis CO92 gshB and Yersinia pestis KIM gshB. Contains RNA-binding region RNP-1 (RNA recognition motif) (Interpro|IPR000504%2C (GO:0003676)). Contains Prokaryotic glutathione synthetase%2C N-terminal (Interpro|IPR004215%2C (GO:0006750)). Contains Prokaryotic glutathione synthetase ATP-binding domain (Interpro|IPR004218%2C (GO:0006750)). Contains Glutathione synthetase%2C prokaryotic (Interpro|IPR006284) gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3507 YP_3508 YP3508 YP_3508 3993417 3994148 - hypothetical protein similar to Yersinia pestis CO92 YPO0934 and Yersinia pestis KIM y3320. Contains Conserved hypothetical protein 46 (Interpro|IPR004382%2C (GO:0005554)). Contains Protein of unknown function DUF558 (Interpro|IPR006700) gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3508 YP_3510 YP3510 endA endA 3994400 3995107 - endonuclease I similar to Yersinia pestis CO92 endA and Yersinia pestis KIM endA gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3510 YP_3511 YP3511 sprT sprT 3995205 3995768 - hypothetical protein similar to Yersinia pestis CO92 YPO0932 and Yersinia pestis KIM sprT. Contains Putative metallopeptidase (SprT family) (Interpro|IPR005622). Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C (GO:0008237)%2C (GO:0008270)). Contains SprT (Interpro|IPR006640) gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3511 YP_3512 YP3512 metK metK 3995910 3997064 - S-adenosylmethionine synthetase similar to Yersinia pestis CO92 metK and Yersinia pestis KIM metK. Contains S-adenosylmethionine synthetase (Interpro|IPR002133%2C (GO:0006730)) gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3512 YP_3513 YP3513 speA speA 3998272 4000251 + biosynthetic arginine decarboxylase similar to Yersinia pestis CO92 speA and Yersinia pestis KIM speA. Contains Orn/DAP/Arg decarboxylase%2C family 2 (Interpro|IPR000183%2C (GO:0003824)). Contains Arginine decarboxylase (Interpro|IPR002985%2C (GO:0008295)%2C (GO:0008792)) gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3513 YP_3514 YP3514 hcaA12 hcaA12 4000411 4000731 + putative Rieske protein similar to Yersinia pestis CO92 YPO0928 and Yersinia pestis KIM y3312. Contains Rieske iron-sulfur protein (Interpro|IPR005805%2C (GO:0006118)%2C (GO:0045285)). Contains Rieske [2Fe-2S] domain (Interpro|IPR005806%2C (GO:0006118)%2C (GO:0016491)) gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3514 YP_3515 YP3515 htpX3 htpX3 4001021 4001800 - Zn-dependent protease with chaperone function similar to Yersinia pestis KIM y3311. Contains Peptidase family M48 (Interpro|IPR001915%2C (GO:0016020)) gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3515 YP_3516 YP3516 tktA3 tktA3 4002264 4004258 + transketolase 1 similar to Yersinia pestis CO92 tktA and Yersinia pestis KIM tktA. Contains Transketolase%2C N terminal (Interpro|IPR005474). Contains Transketolase%2C central region (Interpro|IPR005475). Contains Transketolase%2C C terminal (Interpro|IPR005476). Contains Bacterial transketolase (Interpro|IPR005478%2C (GO:0004802)) gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3516 YP_3517 YP3517 tnp_38 tnp_38 4004515 4005024 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3517 YP_3518 YP3518 epd epd 4005365 4006381 + D-erythrose 4-phosphate dehydrogenase similar to Yersinia pestis CO92 epd and Yersinia pestis KIM epd. Contains Glyceraldehyde 3-phosphate dehydrogenase (Interpro|IPR000173%2C (GO:0006096)). Contains Nitrogenase component 1 alpha and beta subunits (Interpro|IPR000318%2C (GO:0016163)). Contains D-erythrose-4-phosphate dehydrogenase (Interpro|IPR006422) gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3518 YP_3519 YP3519 pgk pgk 4006484 4007647 + phosphoglycerate kinase similar to Yersinia pestis CO92 pgk and Yersinia pestis KIM pgk. Contains Phosphoglycerate kinase (Interpro|IPR001576%2C (GO:0006096)) gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3519 YP_3520 YP3520 fbaA fbaA 4007767 4008846 + fructose-bisphosphate aldolase class II similar to Yersinia pestis CO92 fbaA and Yersinia pestis KIM fba. Contains Ketose-bisphosphate aldolase%2C class-II (Interpro|IPR000771%2C (GO:0008270)). Contains Fructose-bisphosphate aldolase%2C class II%2C yeast/E. coli subtype (Interpro|IPR006411) gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3520 YP_3521 YP3521 mscS2 mscS2 4009284 4010153 + putative membrane protein similar to Yersinia pestis CO92 YPO0919 and Yersinia pestis KIM y3306. Contains Mechanosensitive (MS) ion channel (Interpro|IPR006685). Contains Mechanosensitive (MS) ion channel subdomain (Interpro|IPR006686) gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3521 YP_3522 YP3522 YP_3522 4010416 4010880 + similar to C-terminal 155 reisdues of gi|16121223|ref|NP_404536.1| (NC_003143) putative LysE type translocator [Yersinia pestis](len:205 aa). This CDS has been disrupted by IS100 element%2C and the N-termial locates in 4112554 to 4112712(complement). The rearrangement has been confirmed.Contains Heat shock protein Hsp70 (Interpro|IPR001023).Contains Lysine exporter protein (LYSE/YGGA) (Interpro|IPR001123%2C (GO:0016020)). pseudogene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3522 YP_3523 YP3523 dnaC_27 dnaC_27 4010946 4011728 - insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3523 YP_3524 YP3524 YP_3524 4011725 4012747 - transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3524 YP_3525 YP3525 tnp_39 tnp_39 4012858 4013316 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 and similar to tnp and Yersinia pestis KIM y0754 (residues 1 to 152 of 170 are similar to residues 19 to 170 of 170 from Yersinia pestis KIM y0754). Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3525 YP_3526 YP3526 aslA1 aslA1 4013768 4015321 - putative sulfatase similar to Yersinia pestis CO92 YPO0829 and Yersinia pestis KIM y3215. Contains Sulfatase (Interpro|IPR000917%2C (GO:0008152)%2C (GO:0008484)). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311) gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3526 YP_3527 YP3527 agaR agaR 4016161 4016937 + DeoR-family regulatory protein similar to Yersinia pestis CO92 YPO0831 and Yersinia pestis KIM agaR. Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C DeoR family (Interpro|IPR001034%2C (GO:0006355)) gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3527 YP_3528 YP3528 agaZ agaZ 4016987 4018285 + putative tagatose 6-phosphate kinase similar to Yersinia pestis CO92 agaZ and Yersinia pestis KIM agaZ. gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3528 YP_3529 YP3529 agaS agaS 4018282 4019448 + putative phosphosugar isomerase similar to Yersinia pestis CO92 YPO0833 and Yersinia pestis KIM agaS. Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)) gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3529 YP_3530 YP3530 manX2 manX2 4019466 4019963 + putative PTS transport protein similar to Yersinia pestis CO92 manX and Yersinia pestis KIM agaV. Contains PTS system fructose subfamily IIA component (Interpro|IPR004701%2C (GO:0016021)). Contains PTS system sorbose subfamily IIB component (Interpro|IPR004720%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009401)). Contains PTS system sorbose subfamily IIB component (Interpro|IPR004720%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009401)) gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3530 YP_3531 YP3531 YP_3531 4020010 4020798 + putative PTS permease protein similar to Yersinia pestis CO92 YPO0835 and Yersinia pestis KIM y3220. Contains Phosphotransferase system PTS%2C sorbose-specific IIC subunit (Interpro|IPR004700%2C (GO:0016021)) gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3531 YP_3532 YP3532 YP_3532 4020788 4021678 + putative PTS permease protein similar to Yersinia pestis CO92 YPO0836. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains PTS system mannose/fructose/sorbose family IID component (Interpro|IPR004704%2C (GO:0016021)) gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3532 YP_3533 YP3533 manX3 manX3 4021764 4022204 + Phosphotransferase system%2C mannose/fructose-specific component IIA similar to Yersinia pestis KIM y3222. Contains PTS system fructose subfamily IIA component (Interpro|IPR004701%2C (GO:0016021)) gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3533 YP_3534 YP3534 nagA2 nagA2 4022207 4023373 + 2-deoxy-D-gluconate 3-dehydrogenase similar to Yersinia pestis CO92 YPO0838 and Yersinia pestis KIM y3223. Contains N-acetylglucosamine-6-phosphate deacetylase (Interpro|IPR003764%2C (GO:0006044)%2C (GO:0008448)). Contains Amidohydrolase (Interpro|IPR006680) gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3534 YP_3535 YP3535 kduD2 kduD2 4023569 4024324 + 2-deoxy-D-gluconate 3-dehydrogenase similar to Yersinia pestis CO92 kduD2 and Yersinia pestis KIM kduD. Contains Short-chain dehydrogenase/reductase SDR (Interpro|IPR002198%2C (GO:0008152)%2C (GO:0016491)). Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)) gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3535 YP_3536 YP3536 YP_3536 4024340 4025398 + hypothetical protein similar to Yersinia pestis CO92 YPO0840 and Yersinia pestis KIM y3225 gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3536 YP_3537 YP3537 aslB2 aslB2 4025829 4027055 + putative regulatory protein similar to Yersinia pestis CO92 YPO0841 and Yersinia pestis KIM aslB gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3537 YP_3538 YP3538 aslA2 aslA2 4027076 4028683 + putative sulfatase similar to Yersinia pestis CO92 YPO0842 and Yersinia pestis KIM y3227. Contains Sulfatase (Interpro|IPR000917%2C (GO:0008152)%2C (GO:0008484)) gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3538 YP_3539 YP3539 YP_3539 4028806 4030293 + hypothetical protein similar to Yersinia pestis CO92 YPO0843 and Yersinia pestis KIM y3228 gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3539 YP_3540 YP3540 agaY agaY 4030403 4031257 + putative aldolase similar to Yersinia pestis CO92 agaY and Yersinia pestis KIM agaY. Contains Ketose-bisphosphate aldolase%2C class-II (Interpro|IPR000771%2C (GO:0008270)) gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3540 YP_3541 YP3541 thiJ2 thiJ2 4031281 4031859 + ThiJ/PfpI-family thiamine biogenesis protein similar to Yersinia pestis CO92 YPO0845 and Yersinia pestis KIM y3230. Contains Family of unknown function ThiJ/PfpI (Interpro|IPR002818) gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3541 YP_3542 YP3542 YP_3542 4031829 4032110 - hypothetical protein no significant database match found gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3542 YP_3543 YP3543 purR12 purR12 4032100 4033182 - LacI-family regulatory protein similar to Yersinia pestis CO92 YPO0846 and Yersinia pestis KIM y3231. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3543 YP_3544 YP3544 exuT2 exuT2 4033576 4034883 + putative sugar transporter similar to Yersinia pestis CO92 YPO0847 and Yersinia pestis KIM exuT. Contains D-galactonate transporter (Interpro|IPR004744%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3544 YP_3545 YP3545 YP_3545 4035031 4037409 + putative glucosidase similar to Yersinia pestis CO92 YPO0848 and Yersinia pestis KIM y3233. Contains Glycoside hydrolase%2C family 31 (Interpro|IPR000322%2C (GO:0005975)). Contains Hydroxymethylglutaryl-coenzyme A reductase (Interpro|IPR002202%2C (GO:0009058)) gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3545 YP_3546 YP3546 lacI lacI 4037722 4038870 - lactose operon repressor similar to Yersinia pestis CO92 lacI and Yersinia pestis KIM lacI. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3546 YP_3547 YP3547 lamB2 lamB2 4038995 4040326 + maltoporin similar to Yersinia pestis CO92 lamB and Yersinia pestis KIM y3235. Contains Porin%2C LamB type (Interpro|IPR003192%2C (GO:0016020)). Contains Porin%2C LamB type (Interpro|IPR003192%2C (GO:0016020)) gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3547 YP_3548 YP3548 YP_3548 4040699 4041010 - similar to Yersinia pestis CO92 YPO0851 and Yersinia pestis KIM y3236. Contains Phosphotransferase system PTS%2C EIIB domain (Interpro|IPR001996%2C (GO:0016020)) pseudogene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3548 YP_3549 YP3549 bgaB bgaB 4041122 4043182 - putative beta-galactosidase similar to Yersinia pestis CO92 bgaB and Yersinia pestis KIM y3237. Contains Glycoside hydrolase%2C family 42 (Interpro|IPR003476%2C (GO:0009341)) gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3549 YP_3550 YP3550 YP_3550 4043233 4044435 - putative galactosidase similar to Yersinia pestis CO92 YPO0853 and Yersinia pestis KIM y3238 gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3550 YP_3551 YP3551 malG7 malG7 4044440 4045291 - putative maltodextrin permease protein similar to Yersinia pestis CO92 YPO0854 and Yersinia pestis KIM malG. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3551 YP_3552 YP3552 malF7 malF7 4045303 4046610 - putative maltodextrin transport permease similar to Yersinia pestis CO92 YPO0855 and Yersinia pestis KIM malF. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3552 YP_3553 YP3553 malE2 malE2 4046770 4048032 - putative sugar-binding protein similar to Yersinia pestis CO92 YPO0856 and Yersinia pestis KIM y3241. Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)). Contains Maltose binding protein (Interpro|IPR006060%2C (GO:0015768)) gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3553 YP_3554 YP3554 YP_3554 4048368 4049474 + putative transport ATP-binding protein similar to Yersinia pestis KIM y3242. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains TOBE domain (Interpro|IPR005116) gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3554 YP_3555 YP3555 rbsA4 rbsA4 4049934 4051541 + sugar transport ATP-binding protein similar to Yersinia pestis CO92 YPO0858 and Yersinia pestis KIM rbsA. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphoribulokinase (Interpro|IPR006082%2C (GO:0008974)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains GTP1/OBG family (Interpro|IPR006073). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPas gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3555 YP_3556 YP3556 rbsC3 rbsC3 4051607 4052617 + sugar transport system permease similar to Yersinia pestis CO92 YPO0859 and Yersinia pestis KIM rbsC. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3556 YP_3557 YP3557 rbsB11 rbsB11 4053015 4054037 + sugar-binding periplasmic protein similar to Yersinia pestis CO92 YPO0860 and Yersinia pestis KIM y3245. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3557 YP_3558 YP3558 YP_3558 4054816 4055334 + putative exported protein similar to Yersinia pestis CO92 YPO0862 and Yersinia pestis KIM y3246 gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3558 YP_3559 YP3559 spr3 spr3 4055710 4056567 + putative lipoprotein similar to Yersinia pestis CO92 YPO0863 and Yersinia pestis KIM y3247 gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3559 YP_3561 YP3561 YP_3561 4056991 4057671 + putative transcriptional regulators similar to Yersinia pestis CO92 YPO0864 and Yersinia pestis KIM y3249. Contains Transcriptional regulator PadR-like family (Interpro|IPR005149) gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3561 YP_3562 YP3562 YP_3562 4057671 4057991 + hypothetical protein similar to Yersinia pestis CO92 YPO0865 and Yersinia pestis KIM y3250 gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3562 YP_3563 YP3563 YP_3563 4058090 4058395 - hypothetical protein similar to Yersinia pestis CO92 YPO0866 and Yersinia pestis KIM y3251 gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3563 YP_3564 YP3564 YP_3564 4058612 4059391 - putative membrane protein similar to Yersinia pestis CO92 YPO0867 and Yersinia pestis KIM y3252 gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3564 YP_3566 YP3566 YP_3566 4059980 4060747 - similar to Yersinia pestis CO92 YPO0869 and Yersinia pestis KIM y3253. Contains a nonsense mutation at codon 187. The sequence has been checked and is believed to be correct. pseudogene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3566 YP_3567 YP3567 YP_3567 4060717 4063041 - hypothetical protein similar to Yersinia pestis CO92 YPO0870 and Yersinia pestis KIM y3254. Contains Beta and gamma crystallin (Interpro|IPR001064) gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3567 YP_3568 YP3568 YP_3568 4063286 4063570 - putative colicin immunity protein similar to Yersinia pestis CO92 YPO0871 gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3568 YP_3569 YP3569 YP_3569 4063617 4063874 - hypothetical protein similar to Yersinia pestis CO92 YPO0872 gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3569 YP_3570 YP3570 YP_3570 4064193 4064387 - hypothetical protein Best Blastp hit %3D gi|21398988|ref|NP_654973.1| (NC_003995) hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] [Bacillus anthracis str. A2012]%2C(len:88 aa) gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3570 YP_3571 YP3571 YP_3571 4064384 4065922 - hypothetical protein similar to Yersinia pestis CO92 YPO0873 and Yersinia pestis KIM y3255 gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3571 YP_3572 YP3572 YP_3572 4066426 4067568 - hypothetical protein similar to Yersinia pestis CO92 YPO0874 and Yersinia pestis KIM y3256. Contains Filamentation induced by cAMP protein Fic (Interpro|IPR003812%2C (GO:0000074)) gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3572 YP_3573 YP3573 YP_3573 4067897 4068202 + hypothetical protein similar to Yersinia pestis CO92 YPO0875 and Yersinia pestis KIM y3257. gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3573 YP_3574 YP3574 YP_3574 4068215 4068451 + hypothetical protein similar to Yersinia pestis CO92 YPO0876 and Yersinia pestis KIM y3258 gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3574 YP_3575 YP3575 YP_3575 4068457 4068789 + hypothetical protein similar to Yersinia pestis CO92 YPO0877 and Yersinia pestis KIM y3259. gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3575 YP_3576 YP3576 alpA3 alpA3 4068971 4069171 + putative regulatory protein similar to Yersinia pestis CO92 YPO0878 and Yersinia pestis KIM y3260 gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3576 YP_3578 YP3578 YP_3578 4069956 4072247 + putative primase similar to Yersinia pestis CO92 YPO0880 and similar to Yersinia pestis KIM y3265 (residues 67 to 763 of 763 are similar to residues 1 to 697 of 697 from Yersinia pestis KIM y3265). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3578 YP_3579 YP3579 hipB4 hipB4 4072647 4073045 - putative transcriptional regulators similar to Yersinia pestis CO92 YPO0881 and Yersinia pestis KIM y3266. Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)) gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3579 YP_3580 YP3580 YP_3580 4073045 4073341 - hypothetical protein similar to Yersinia pestis CO92 YPO0882 gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3580 YP_3581 YP3581 hipB5 hipB5 4073505 4073867 - putative DNA binding protein similar to Yersinia pestis CO92 YPO0883 and similar to Yersinia pestis KIM y3267(residues 1 to 120 of 120 are similar to residues 4 to 123 of 123 from Yersinia pestis KIM y3267). Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)) gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3581 YP_3582 YP3582 relE relE 4073930 4074190 - Plasmid stabilization system protein similar to Yersinia pestis CO92 YPO0884. Contains Protein of unknown function DUF79 (Interpro|IPR002776) gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3582 YP_3583 YP3583 int4 int4 4075038 4076252 - integrase similar to Yersinia pestis CO92 int and Yersinia pestis KIM y3271. Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)). Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)) gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3583 YP_3584 YP3584 lysS lysS 4076685 4078202 - lysyl-tRNA synthetase similar to Yersinia pestis CO92 lysS and Yersinia pestis KIM lysS. Contains Aspartyl-tRNA synthetase%2C class IIb (Interpro|IPR002312%2C (GO:0006422)). Contains Lysyl-tRNA synthetase%2C class-2 (Interpro|IPR002313%2C (GO:0006430)). Contains tRNA synthetase%2C class II (D%2C K and N) (Interpro|IPR004364%2C (GO:0006418)). Contains OB-fold nucleic acid binding domain (Interpro|IPR004365%2C (GO:0003676)). Contains Aminoacyl-transfer RNA synthetase%2C class II (Interpro|IPR006195%2C (GO:0006418)) gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3584 YP_3585 YP3585 prfB2 prfB2 4078212 4079144 - peptide chain release factor RF-2 similar to Yersinia pestis KIM prfB. Contains Class I peptide chain release factor domain (Interpro|IPR000352%2C (GO:0006415)). Contains Peptide chain release factor 2 (Interpro|IPR004374%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0006415)%2C (GO:0016149)). Contains PCRF domain (Interpro|IPR005139) gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3585 YP_3586 YP3586 recJ recJ 4079489 4081222 - single-stranded-DNA-specific exonuclease similar to Yersinia pestis CO92 recJ and Yersinia pestis KIM recJ. Contains Phosphoesterase%2C RecJ-like (Interpro|IPR001667). Contains Phosphoesterase%2C DHHA1 (Interpro|IPR003156%2C (GO:0003676)). Contains Bacterial RecJ exonuclease (Interpro|IPR004610%2C (GO:0006310)%2C (GO:0008409)) gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3586 YP_3587 YP3587 dsbC dsbC 4081229 4081945 - thiol:disulfide interchange protein (DsbC) similar to Yersinia pestis CO92 dsbC and Yersinia pestis KIM dsbC. Contains Thioredoxin type domain (Interpro|IPR006662%2C (GO:0006118)) gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3587 YP_3588 YP3588 xerD xerD 4081976 4082875 - integrase/recombinase similar to Yersinia pestis CO92 xerD and Yersinia pestis KIM xerD. Contains Phage integrase (Interpro|IPR002104%2C (GO:0015074)). Contains Phage integrase%2C N-terminal SAM-like (Interpro|IPR004107%2C (GO:0015074)) gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3588 YP_3589 YP3589 fldB fldB 4082919 4083500 + flavodoxin 2 similar to Yersinia pestis KIM fldB. Contains Flavodoxin (Interpro|IPR001226%2C (GO:0006118)%2C (GO:0009457)) gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3589 YP_3590 YP3590 creD creD 4083590 4085068 - putative membrane protein similar to Yersinia pestis CO92 creD gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3590 YP_3591 YP3591 creC creC 4085168 4086586 - putative histidine kinase sensor similar to Yersinia pestis CO92 creC and Yersinia pestis KIM creC. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3591 YP_3592 YP3592 creB creB 4086611 4087312 - putative response regulator similar to Yersinia pestis CO92 creB and Yersinia pestis KIM creB. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3592 YP_3593 YP3593 YP_3593 4087309 4087734 - hypothetical protein similar to Yersinia pestis CO92 YPO0896a and Yersinia pestis KIM y3281. gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3593 YP_3594 YP3594 YP_3594 4087715 4087981 - hypothetical protein similar to Yersinia pestis CO92 YPO0897 and Yersinia pestis KIM y3282. Contains Protein of unknown function DUF339 (Interpro|IPR005631) gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3594 YP_3595 YP3595 YP_3595 4088298 4089290 + putative aminomethyltransferase related to GcvT similar to Yersinia pestis CO92 YPO0898 and Yersinia pestis KIM y3283. Contains Glycine cleavage T protein (aminomethyl transferase) (Interpro|IPR006222) gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3595 YP_3596 YP3596 YP_3596 4089363 4089893 - putative membrane protein similar to Yersinia pestis CO92 YPO0899 and Yersinia pestis KIM y3284. gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3596 YP_3597 YP3597 YP_3597 4090118 4090819 - putative hemolysin III similar to Yersinia pestis CO92 YPO0900 and Yersinia pestis KIM y3285. Contains Hly-III related proteins (Interpro|IPR004254). Contains HylII (Interpro|IPR005744%2C (GO:0019835)) gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3597 YP_3598 YP3598 YP_3598 4091021 4092166 - putative exported protein similar to Yersinia pestis CO92 YPO0901 and Yersinia pestis KIM y3286. gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3598 YP_3599 YP3599 YP_3599 4092228 4094204 - similar to Yersinia pestis CO92 YPO0902 and Yersinia pestis KIM y3288. Contains YadA-like%2C C-terminal (Interpro|IPR005594) pseudogene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3599 YP_3600 YP3600 YP_3600 4094201 4094365 - hypothetical protein similar to Yersinia pestis KIM y3289. gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3600 YP_3601 YP3601 YP_3601 4095414 4095851 - hypothetical protein similar to Yersinia pestis CO92 YPO0904 and Yersinia pestis KIM y3291 gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3601 YP_3602 YP3602 gcvP gcvP 4096229 4099108 - glycine dehydrogenase similar to Yersinia pestis CO92 gcvP and Yersinia pestis KIM gcvP. Contains Glycine cleavage system P-protein (Interpro|IPR003437%2C (GO:0006544)) gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3602 YP_3603 YP3603 gcsH gcsH 4099320 4099706 - glycine cleavage system H protein similar to Yersinia pestis CO92 gcsH and Yersinia pestis KIM gcvH. Contains Glycine cleavage H-protein (Interpro|IPR002930%2C Cellular Component: glycine cleavage system complex (GO:0005960)%2C (GO:0006546)). Contains 2-oxo acid dehydrogenase%2C acyltransferase component%2C lipoyl-binding (Interpro|IPR003016) gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3603 YP_3604 YP3604 gcvT gcvT 4099775 4100872 - aminomethyltransferase similar to Yersinia pestis CO92 gcvT and Yersinia pestis KIM gcvT. Contains Glycine cleavage T protein (aminomethyl transferase) (Interpro|IPR006222). Contains Glycine cleavage system T protein (Interpro|IPR006223%2C (GO:0006546)) gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3604 YP_3605 YP3605 visC visC 4101593 4103029 - putative monooxygenase similar to Yersinia pestis CO92 visC and Yersinia pestis KIM visC. Contains NAD binding site (Interpro|IPR000205). Contains UbiH/COQ6 monooxygenase (Interpro|IPR000689%2C (GO:0004497)). Contains Flavoprotein monooxygenase (Interpro|IPR000733%2C (GO:0008246)). Contains Zinc carboxypeptidase A metalloprotease (M14) (Interpro|IPR000834%2C (GO:0006508)). Contains Aromatic-ring hydroxylase (Interpro|IPR003042%2C (GO:0008152)%2C (GO:0016491)). Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)) gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3605 YP_3606 YP3606 ubiH ubiH 4102986 4104164 - 2-octaprenyl-6-methoxyphenol hydroxylase similar to Yersinia pestis CO92 ubiH and Yersinia pestis KIM ubiH. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains UbiH/COQ6 monooxygenase (Interpro|IPR000689%2C (GO:0004497)). Contains Flavoprotein monooxygenase (Interpro|IPR000733%2C (GO:0008246)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Aromatic-ring hydroxylase (Interpro|IPR003042%2C (GO:0008152)%2C (GO:0016491)) gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3606 YP_3607 YP3607 pepP2 pepP2 4104250 4105563 - proline-specific aminopeptidase similar to Yersinia pestis CO92 pepP and Yersinia pestis KIM pepP. Contains Metallopeptidase family M24 (Interpro|IPR000994%2C (GO:0006508)%2C (GO:0008235)). Contains Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase (Interpro|IPR001131%2C (GO:0006508)%2C (GO:0008235)). Contains Methionine aminopeptidase (Interpro|IPR001714%2C (GO:0006508)) gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3607 YP_3608 YP3608 YP_3608 4105651 4106229 - putative exported protein similar to Yersinia pestis CO92 YPO0911 and Yersinia pestis KIM y3298. Contains Protein of unknown function UPF0149 (Interpro|IPR005356%2C (GO:0005554)) gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3608 YP_3609 YP3609 YP_3609 4106518 4106895 + hypothetical protein similar to Yersinia pestis CO92 YPO0912 and Yersinia pestis KIM y3299. gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3609 YP_3610 YP3610 YP_3610 4107259 4107855 + putative 5-formyltetrahydrofolatecyclo-ligase-family protein similar to Yersinia pestis CO92 YPO0913 and Yersinia pestis KIM y3300. Contains 5-formyltetrahydrofolate cyclo-ligase (Interpro|IPR002698%2C (GO:0008152)) gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3610 YP_3611 YP3611 serA2 serA2 4108120 4109361 - D-3-phosphoglycerate dehydrogenase similar to Yersinia pestis CO92 serA and Yersinia pestis KIM serA. Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain (Interpro|IPR006139%2C (GO:0006564)%2C (GO:0016616)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain (Interpro|IPR006140%2C (GO:0006564)%2C (GO:0016616)) gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3611 YP_3612 YP3612 rpiA2 rpiA2 4109668 4110324 - ribose 5-phosphate isomerase A similar to Yersinia pestis CO92 rpiA and Yersinia pestis KIM rpiA. Contains Ribose 5-phosphate isomerase (Interpro|IPR004788%2C (GO:0009052)). Contains Ribose 5-phosphate isomerase (Interpro|IPR004788%2C (GO:0009052)) gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3612 YP_3613 YP3613 iciA iciA 4110618 4111574 + replication initiation inhibitor similar to Yersinia pestis KIM iciA. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3613 YP_3614 YP3614 YP_3614 4111585 4112427 - putative exported protein similar to Yersinia pestis CO92 YPO0917 and Yersinia pestis KIM y3304. gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3614 YP_3615 YP3615 YP_3615 4112554 4112730 - similar to N-terminal 52 reisdues of gi|16121223|ref|NP_404536.1| (NC_003143) putative LysE type translocator [Yersinia pestis](len:205 aa). This CDS has been disrupted by IS100 element%2C and the C-termial locates in 4010416 to 4010880. The rearrangement has been confirmed. pseudogene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3615 YP_3616 YP3616 YP_3616 4112799 4113821 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3616 YP_3617 YP3617 dnaC_28 dnaC_28 4113818 4114600 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3617 YP_3618 YP3618 YP_3618 4114651 4114776 - len: 41 aa%3B higly similar to many transposase%2C such as gi|22124058|ref|NP_667481.1| (NC_004088) putative transposase [Yersinia pestis KIM]%3B this CDS has been disrupted by IS100 element. pseudogene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3618 YP_3619 YP3619 mutT8 mutT8 4114940 4115326 - mutator protein MutT similar to Yersinia pestis CO92 YPO0565 and Yersinia pestis KIM mutT. Contains NUDIX hydrolase (Interpro|IPR000086). Contains Mutator MutT (Interpro|IPR003561%2C (GO:0006281)%2C (GO:0008413)) gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3619 YP_3620 YP3620 secA secA 4115621 4118335 - preprotein translocase SecA similar to Yersinia pestis CO92 secA and Yersinia pestis KIM secA. Contains SecA protein (Interpro|IPR000185%2C (GO:0006886)). Contains SEC-C motif (Interpro|IPR004027) gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3620 YP_3621 YP3621 YP_3621 4118413 4118946 - putative exported protein similar to Yersinia pestis CO92 YPO0563 and Yersinia pestis KIM y3618. gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3621 YP_3622 YP3622 YP_3622 4118969 4119499 + hypothetical protein similar to Yersinia pestis CO92 YPO0562 and Yersinia pestis KIM y3619. gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3622 YP_3623 YP3623 lpxC lpxC 4119666 4120601 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase similar to Yersinia pestis CO92 lpxC and Yersinia pestis KIM lpxC. Contains UDP-3-0-acyl N-acetylglucosamine deacetylase (Interpro|IPR004463%2C (GO:0009245)) gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3623 YP_3624 YP3624 ftsZ ftsZ 4120613 4121836 - cell division protein FtsZ similar to Yersinia pestis CO92 ftsZ and Yersinia pestis KIM ftsZ. Contains Cell division protein FtsZ (Interpro|IPR000158). Contains Tubulin family (Interpro|IPR000217%2C (GO:0007018)). Contains Tubulin/FtsZ protein (Interpro|IPR003008) gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3624 YP_3625 YP3625 ftsA2 ftsA2 4121909 4123165 - cell division protein FtsA similar to Yersinia pestis CO92 ftsA and Yersinia pestis KIM ftsA. Contains Heat shock protein Hsp70 (Interpro|IPR001023). Contains Cell division protein FtsA (Interpro|IPR003494%2C (GO:0007049)) gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3625 YP_3626 YP3626 ftsQ ftsQ 4123192 4124019 - cell division protein FtsQ similar to Yersinia pestis CO92 ftsQ and Yersinia pestis KIM ftsQ. Contains Cell division protein FtsQ (Interpro|IPR005548) gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3626 YP_3627 YP3627 ddlB ddlB 4124021 4124941 - D-alanine--D-alanine ligase B similar to Yersinia pestis CO92 ddlB and Yersinia pestis KIM ddlB. Contains D-alanine--D-alanine ligase/VANA/B/C (Interpro|IPR000291%2C (GO:0009252)). Contains D-alanine--D-alanine ligase (Interpro|IPR005905%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009252)) gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3627 YP_3628 YP3628 murC murC 4124934 4126457 - UDP-N-acetyl-muramate:alanine ligase similar to Yersinia pestis KIM murC. Contains Cytoplasmic peptidoglycan synthetases%2C N-terminal (Interpro|IPR000713%2C (GO:0005524)). Contains Cytoplasmic peptidoglycan synthetases%2C C-terminal (Interpro|IPR004101%2C (GO:0016874)). Contains UDP-N-acetylmuramate--alanine ligase (Interpro|IPR005758%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009273)) gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3628 YP_3629 YP3629 murG murG 4126547 4127617 - UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapep tide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase similar to Yersinia pestis CO92 murG and Yersinia pestis KIM murG. Contains Glycosyl transferase%2C family 28 (Interpro|IPR004276%2C (GO:0005975)%2C (GO:0016758)%2C (GO:0030259)). Contains N-acetylglucosaminyltransferase%2C MurG (Interpro|IPR006009%2C (GO:0019866)) gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3629 YP_3630 YP3630 ftsW2 ftsW2 4127614 4128816 - cell division protein FtsW similar to Yersinia pestis CO92 ftsW and Yersinia pestis KIM ftsW. Contains Cell cycle protein (Interpro|IPR001182) gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3630 YP_3631 YP3631 murD murD 4128816 4130132 - UDP-N-acetylmuramoylalanine--D-glutamate ligase similar to Yersinia pestis CO92 murD and Yersinia pestis KIM murD. Contains Cytoplasmic peptidoglycan synthetases%2C N-terminal (Interpro|IPR000713%2C (GO:0005524)). Contains Cytoplasmic peptidoglycan synthetases%2C C-terminal (Interpro|IPR004101%2C (GO:0016874)). Contains UDP-N-acetylmuramoylalanine-D-glutamate ligase (Interpro|IPR005762%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009273)). Contains Phosphopantetheine attachment site (Interpro|IPR006162) gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3631 YP_3632 YP3632 mraY mraY 4130135 4131217 - phospho-N-acetylmuramoyl-pentapeptide- transferase similar to Yersinia pestis CO92 mraY and Yersinia pestis KIM mraY. Contains Glycosyl transferase%2C family 4 (Interpro|IPR000715%2C (GO:0016020)). Contains Phospho-N-acetylmuramoyl-pentapeptide transferase (Interpro|IPR003524%2C (GO:0016020)) gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3632 YP_3633 YP3633 murF murF 4131211 4132587 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C 6-diamino pimelate--D-alanyl-D-alanyl ligase similar to Yersinia pestis CO92 murF and Yersinia pestis KIM murF. Contains Cytoplasmic peptidoglycan synthetases%2C N-terminal (Interpro|IPR000713%2C (GO:0005524)). Contains Cytoplasmic peptidoglycan synthetases%2C C-terminal (Interpro|IPR004101%2C (GO:0016874)). Contains UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate-D-alanyl-D-alanyl ligase (Interpro|IPR005863%2C (GO:0008766)) gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3633 YP_3634 YP3634 murE murE 4132584 4134071 - UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diami nopimelate ligase similar to Yersinia pestis CO92 murE and Yersinia pestis KIM murE. Contains Cytoplasmic peptidoglycan synthetases%2C N-terminal (Interpro|IPR000713%2C (GO:0005524)). Contains Cytoplasmic peptidoglycan synthetases%2C C-terminal (Interpro|IPR004101%2C (GO:0016874)). Contains UDP-N-acetylmuramyl-tripeptide synthetase (Interpro|IPR005761%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009273)%2C (GO:0016881)) gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3634 YP_3635 YP3635 ftsI ftsI 4134058 4135821 - penicillin-binding protein 3 similar to Yersinia pestis CO92 ftsI and Yersinia pestis KIM ftsI. Contains Penicillin-binding protein%2C transpeptidase domain (Interpro|IPR001460%2C (GO:0008233)%2C (GO:0008658)%2C (GO:0009273)). Contains Penicillin-binding Protein dimerisation domain (Interpro|IPR005311%2C (GO:0008658)) gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3635 YP_3636 YP3636 ftsL ftsL 4135887 4136204 - putative cell division protein similar to Yersinia pestis CO92 ftsL and Yersinia pestis KIM ftsL. Contains Cell division protein FtsL (Interpro|IPR007082) gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3636 YP_3637 YP3637 YP_3637 4136201 4137163 - putative S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis similar to Yersinia pestis CO92 YPO0547 and Yersinia pestis KIM y3634. Contains Bacterial methyltransferase (Interpro|IPR002903%2C (GO:0008168)) gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3637 YP_3638 YP3638 YP_3638 4137166 4137624 - hypothetical protein similar to Yersinia pestis CO92 YPO0546 and Yersinia pestis KIM y3635. Contains Protein of unknown function UPF0040 (Interpro|IPR003444) gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3638 YP_3639 YP3639 YP_3639 4138711 4139166 + hypothetical protein similar to Yersinia pestis KIM y3636 gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3639 YP_3640 YP3640 fruR fruR 4139297 4140307 - putative fructose repressor similar to Yersinia pestis CO92 fruR and Yersinia pestis KIM fruR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3640 YP_3641 YP3641 tnp_40 tnp_40 4140812 4141321 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3641 YP_3642 YP3642 YP_3642 4141699 4141914 - hypothetical protein no significant database match found gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3642 YP_3643 YP3643 leuO leuO 4142579 4143547 + LysR-family transcriptional regulator LeuO similar to Yersinia pestis CO92 leuO and Yersinia pestis KIM leuO. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3643 YP_3645 YP3645 fAA1 fAA1 4144096 4145901 + putative AMP-binding enzyme-family protein similar to Yersinia pestis CO92 YPO0537 and Yersinia pestis KIM y3641. Contains AMP-dependent synthetase and ligase (Interpro|IPR000873%2C (GO:0008152)) gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3645 YP_3646 YP3646 ilvI ilvI 4146307 4148088 + acetolactate synthase isozyme III large subunit similar to Yersinia pestis CO92 ilvI and Yersinia pestis KIM ilvI. Contains Pyruvate decarboxylase (Interpro|IPR000399). Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains Acetolactate synthase large subunit biosynthetic type (Interpro|IPR004407%2C (GO:0009082)) gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3646 YP_3647 YP3647 ilvH ilvH 4148061 4148585 + acetolactate synthase isozyme III small subunit similar to Yersinia pestis CO92 ilvH and Yersinia pestis KIM ilvH. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)). Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains Acetolactate synthase%2C small subunit (Interpro|IPR004789%2C (GO:0009082)) gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3647 YP_3648 YP3648 tnp_41 tnp_41 4148733 4149242 + transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3648 YP_3649 YP3649 leuA leuA 4149389 4150951 + 2-isopropylmalate synthase similar to Yersinia pestis CO92 leuA. Contains HMG-CoA lyase-like (Interpro|IPR000891%2C (GO:0003824)). Contains Alpha-isopropylmalate/homocitrate synthase (Interpro|IPR002034%2C (GO:0008152)%2C (GO:0016829)). Contains Bacterial 2-isopropylmalate synthase (Interpro|IPR005671%2C (GO:0009098)%2C (GO:0016833)) gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3649 YP_3650 YP3650 leuB2 leuB2 4150948 4152045 + 3-isopropylmalate dehydrogenase similar to Yersinia pestis CO92 leuB and Yersinia pestis KIM leuB. Contains Isocitrate/isopropylmalate dehydrogenase (Interpro|IPR001804%2C (GO:0008152)%2C (GO:0016491)). Contains 3-isopropylmalate dehydrogenase (Interpro|IPR004429%2C (GO:0009098)) gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3650 YP_3651 YP3651 leuC leuC 4151978 4153477 + 3-isopropylmalate isomerase (dehydratase) subunit similar to Yersinia pestis KIM leuC. Contains Aconitate hydratase%2C N-terminal (Interpro|IPR001030). Contains 3-isopropylmalate dehydratase large subunit (Interpro|IPR004430%2C (GO:0009316)) gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3651 YP_3652 YP3652 leuD leuD 4153492 4154094 + 3-isopropylmalate dehydratase small subunit similar to Yersinia pestis CO92 leuD and Yersinia pestis KIM leuD. Contains Aconitate hydratase%2C C-terminal (Interpro|IPR000573%2C (GO:0008152)%2C (GO:0016836)). Contains 3-isopropylmalate dehydratase small subunit (Interpro|IPR004431%2C (GO:0009316)) gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3652 YP_3653 YP3653 setA setA 4154335 4155516 - putative efflux protein similar to Yersinia pestis KIM setA. Contains Cl- channel%2C voltage gated (Interpro|IPR001807%2C (GO:0016020)). Contains Sugar efflux (Interpro|IPR004750%2C (GO:0008643)%2C (GO:0016021)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3653 YP_3655 YP3655 oppA5 oppA5 4156180 4157841 + ABC-type dipeptide/oligopeptide/nickel transport systems%2C periplasmic components similar to Yersinia pestis CO92 YPO0524. Contains Bacterial extracellular solute-binding protein%2C family 5 (Interpro|IPR000914%2C (GO:0006810)) gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3655 YP_3656 YP3656 YP_3656 4157942 4158226 - putative membrane protein similar to Yersinia pestis CO92 YPO0523 gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3656 YP_3657 YP3657 tbpA3 tbpA3 4158781 4159773 + thiamine-binding periplasmic protein similar to Yersinia pestis CO92 YPO0522 and Yersinia pestis KIM tbpA. Contains Thiamine ABC transporter periplasmic binding protein (Interpro|IPR005948%2C (GO:0030288)). Contains Proteobacterial thiamine ABC transporter%2C periplasmic binding protein (Interpro|IPR005967%2C (GO:0030288)). Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3657 YP_3658 YP3658 thiP thiP 4159737 4161356 + putative transport similar to Yersinia pestis KIM thiP. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Type III secretion system outer membrane O protein (Interpro|IPR003283%2C (GO:0009306)%2C (GO:0015448)). Contains Thiamine ABC transporter%2C permease protein (Interpro|IPR005947%2C (GO:0019866)) gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3658 YP_3659 YP3659 thiQ thiQ 4161322 4162053 + thiamine transport ATP-binding protein similar to Yersinia pestis CO92 thiQ and Yersinia pestis KIM thiQ. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Thiamine ABC transporter%2C ATP-binding protein (Interpro|IPR005968%2C (GO:0019866)) gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3659 YP_3660 YP3660 dedA5 dedA5 4162122 4162889 - putative DedA-family membrane protein similar to Yersinia pestis CO92 YPO0519 and Yersinia pestis KIM y3654. Contains DedA family (Interpro|IPR000252%2C (GO:0016020)) gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3660 YP_3661 YP3661 polB polB 4163085 4165454 + DNA polymerase II similar to Yersinia pestis CO92 YPO0518 and Yersinia pestis KIM polB. Contains DNA polymerase B%2C exonuclease domain (Interpro|IPR006133%2C (GO:0008408)). Contains DNA polymerase B domain (Interpro|IPR006134%2C (GO:0003677)). Contains DNA-directed DNA polymerase%2C family B (Interpro|IPR006172%2C (GO:0008408)) gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3661 YP_3662 YP3662 hepA hepA 4165915 4168821 + RNA polymerase associated helicase similar to Yersinia pestis CO92 YPO0517 and Yersinia pestis KIM hepA. Contains SNF2 related domain (Interpro|IPR000330%2C (GO:0005524)). Contains DEAD/DEAH box helicase (Interpro|IPR001410%2C (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C (GO:0005524)) gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3662 YP_3663 YP3663 YP_3663 4169077 4169436 - hypothetical protein similar to Yersinia pestis KIM y3657 gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3663 YP_3664 YP3664 icmF3 icmF3 4169452 4172946 - hypothetical protein similar to Yersinia pestis KIM y3658. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)) gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3664 YP_3665 YP3665 YP_3665 4172955 4174592 - hypothetical protein similar to Yersinia pestis KIM y3659. Contains OmpA/MotB domain (Interpro|IPR006665) gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3665 YP_3666 YP3666 YP_3666 4174562 4175935 - hypothetical protein similar to Yersinia pestis CO92 YPO0513 and Yersinia pestis KIM y3660. gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3666 YP_3667 YP3667 YP_3667 4176019 4176510 - putative lipoprotein similar to Yersinia pestis CO92 YPO0512 gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3667 YP_3668 YP3668 YP_3668 4176503 4176868 - hypothetical protein similar to Yersinia pestis CO92 YPO0511a and Yersinia pestis KIM y3662 gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3668 YP_3669 YP3669 YP_3669 4176874 4177491 - hypothetical protein similar to Yersinia pestis CO92 YPO0511 and Yersinia pestis KIM y3663 gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3669 YP_3670 YP3670 YP_3670 4177484 4178587 - putative low-complexity proteins similar to Yersinia pestis CO92 YPO0510 and Yersinia pestis KIM y3664. Contains Pentapeptide repeat (Interpro|IPR001646) gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3670 YP_3671 YP3671 YP_3671 4178613 4180832 - putative low-complexity proteins similar to Yersinia pestis KIM y3665. Contains Pentapeptide repeat (Interpro|IPR001646) gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3671 YP_3672 YP3672 vgrG5 vgrG5 4180845 4183193 - hypothetical protein similar to Yersinia pestis CO92 YPO0507 and Yersinia pestis KIM y3668. Contains Pollen allergen Poa pIX/Phl pVI%2C C-terminal (Interpro|IPR001778). Contains Rhs element Vgr protein (Interpro|IPR006533) gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3672 YP_3673 YP3673 clpB2 clpB2 4183297 4185900 - putative Clp ATPase similar to Yersinia pestis CO92 clpB and Yersinia pestis KIM y3669. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Clp%2C N terminal (Interpro|IPR004176%2C (GO:0005524)). Contains GTP1/OBG family (Interpro|IPR006073). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3673 YP_3674 YP3674 YP_3674 4185903 4186925 - hypothetical protein similar to Yersinia pestis CO92 YPO0505 and Yersinia pestis KIM y3670. gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3674 YP_3675 YP3675 YP_3675 4186879 4188723 - hypothetical protein similar to Yersinia pestis CO92 YPO0504 and Yersinia pestis KIM y3671 gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3675 YP_3676 YP3676 YP_3676 4188756 4189199 - hypothetical protein similar to Yersinia pestis CO92 YPO0503 and Yersinia pestis KIM y3672 gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3676 YP_3677 YP3677 YP_3677 4189273 4189791 - hypothetical protein similar to Yersinia pestis CO92 YPO0502 and Yersinia pestis KIM y3673 gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3677 YP_3678 YP3678 YP_3678 4189954 4191465 - hypothetical protein similar to Yersinia pestis CO92 YPO0501 and Yersinia pestis KIM y3674. gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3678 YP_3679 YP3679 YP_3679 4191465 4192025 - hypothetical protein similar to Yersinia pestis CO92 YPO0500 and Yersinia pestis KIM y3675 gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3679 YP_3680 YP3680 YP_3680 4192036 4193049 - hypothetical protein similar to Yersinia pestis CO92 YPO0499 and Yersinia pestis KIM y3676. gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3680 YP_3681 YP3681 YP_3681 4193379 4194122 + hypothetical protein similar to Yersinia pestis CO92 YPO0498 and Yersinia pestis KIM y3677 gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3681 YP_3682 YP3682 rluA3 rluA3 4195345 4195965 + ribosomal large subunit pseudouridine synthase A similar to Yersinia pestis CO92 rluA and Yersinia pestis KIM y3678. Contains Pseudouridine synthase (Interpro|IPR006145). Contains Pseudouridine synthase%2C Rlu (Interpro|IPR006224%2C (GO:0004730)) gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3682 YP_3683 YP3683 djlA djlA 4196263 4197096 - DnaJ-like protein similar to Yersinia pestis CO92 djlA and Yersinia pestis KIM y3679. Contains Heat shock protein DnaJ%2C N-terminal (Interpro|IPR001623) gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3683 YP_3684 YP3684 imp imp 4197281 4199623 + organic solvent tolerance protein precursor similar to Yersinia pestis CO92 imp and similar to Yersinia pestis KIM imp (residues 1 to 780 of 780 are similar to residues 13 to 792 of 792 from Yersinia pestis KIM imp). Contains Haem peroxidase (Interpro|IPR002016%2C (GO:0006804)) gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3684 YP_3685 YP3685 surA surA 4199691 4200995 + survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) similar to Yersinia pestis CO92 surA and Yersinia pestis KIM surA. Contains PpiC-type peptidyl-prolyl cis-trans isomerase (Interpro|IPR000297). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3685 YP_3686 YP3686 pdxA pdxA 4200967 4201974 + pyridoxal phosphate biosynthetic protein similar to Yersinia pestis CO92 pdxA and Yersinia pestis KIM pdxA. Contains Pyridoxal phosphate biosynthetic protein PdxA (Interpro|IPR005255) gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3686 YP_3687 YP3687 ksgA2 ksgA2 4201967 4202785 + dimethyladenosine transferase similar to Yersinia pestis CO92 ksgA and Yersinia pestis KIM ksgA. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Ribosomal RNA adenine dimethylase (Interpro|IPR001737%2C (GO:0000179)%2C (GO:0008649)) gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3687 YP_3688 YP3688 apaG apaG 4202799 4203176 + ApaG protein similar to Yersinia pestis CO92 apaG and Yersinia pestis KIM apaG gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3688 YP_3689 YP3689 apaH apaH 4203193 4204062 + bis(5'nucleosyl)-tetraphosphatase similar to Yersinia pestis CO92 apaH and Yersinia pestis KIM apaH. Contains Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) (Interpro|IPR004617%2C (GO:0008803)). Contains Metallo-phosphoesterase (Interpro|IPR004843%2C (GO:0016787)). Contains Serine/threonine-specific protein phosphatase (Interpro|IPR006185%2C (GO:0008287)). Contains Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase family (Interpro|IPR006186%2C (GO:0016787)) gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3689 YP_3690 YP3690 YP_3690 4204152 4204616 - putative exported protein similar to Yersinia pestis CO92 YPO0489 and Yersinia pestis KIM y3686 gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3690 YP_3691 YP3691 YP_3691 4204743 4204964 - hypothetical protein similar to Yersinia pestis CO92 YPO0488 gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3691 YP_3692 YP3692 YP_3692 4205231 4205431 + hypothetical protein no significant database match found gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3692 YP_3693 YP3693 folA folA 4205458 4205940 - dihydrofolate reductase similar to Yersinia pestis CO92 folA and Yersinia pestis KIM folA. Contains Dihydrofolate reductase (Interpro|IPR001796%2C (GO:0009165)) gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3693 YP_3694 YP3694 YP_3694 4206090 4206551 - putative membrane protein similar to Yersinia pestis CO92 YPO0485 and Yersinia pestis KIM y3689. gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3694 YP_3695 YP3695 YP_3695 4206542 4207342 - putative membrane protein similar to Yersinia pestis CO92 YPO0484 and Yersinia pestis KIM y3690 gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3695 YP_3696 YP3696 rhtB3 rhtB3 4207603 4208280 + Putative threonine efflux protein similar to Yersinia pestis KIM y3691. Contains Lysine exporter protein (LYSE/YGGA) (Interpro|IPR001123%2C (GO:0016020)) gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3696 YP_3697 YP3697 carB carB 4208508 4211741 - carbamoyl-phosphate synthase large chain similar to Yersinia pestis CO92 carB and Yersinia pestis KIM carB. Contains Methylglyoxal synthase-like domain (Interpro|IPR004362%2C (GO:0008152)). Contains Carbamoyl-phosphate synthase L chain%2C ATP-binding (Interpro|IPR005479%2C (GO:0005524)). Contains Carbamoyl-phosphate synthetase large chain%2C oligomerisation (Interpro|IPR005480%2C (GO:0019856)). Contains Carbamoyl-phosphate synthetase large chain%2C N-terminal (Interpro|IPR005481%2C (GO:0008152)%2C (GO:0016874)). Contains Carbamoyl-phosphate synthetase large chain (Interpro|IPR005483%2C (GO:0004086)). Contains Carbamoyl-phosphate synthase%2C large subunit%2C glutamine-dependent (Interpro|IPR006275) gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3697 YP_3698 YP3698 carA carA 4211757 4212959 - carbamoyl-phosphate synthase small chain similar to Yersinia pestis CO92 carA and Yersinia pestis KIM carA. Contains Glutamine amidotransferase class-I (Interpro|IPR000991%2C (GO:0003824)). Contains Carbamoyl-phosphate synthase%2C GATase domain (Interpro|IPR001317). Contains Carbamoyl-phosphate synthase%2C small chain (Interpro|IPR002474%2C (GO:0006807)). Contains Anthranilate synthase component II/delta crystallin (Interpro|IPR006220). Contains Carbamoyl-phosphate synthase%2C small subunit (Interpro|IPR006274) gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3698 YP_3699 YP3699 dapB dapB 4213405 4214226 - dihydrodipicolinate reductase similar to Yersinia pestis CO92 dapB and Yersinia pestis KIM dapB. Contains Dihydrodipicolinate reductase (Interpro|IPR000846%2C (GO:0009089)) gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3699 YP_3700 YP3700 tnp_42 tnp_42 4214679 4215188 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3700 YP_3702 YP3702 lytB lytB 4215519 4216496 - LytB protein similar to Yersinia pestis CO92 lytB and Yersinia pestis KIM lytB. Contains LytB protein (Interpro|IPR003451%2C (GO:0019288)) gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3702 YP_3703 YP3703 slpA2 slpA2 4216453 4216986 - putative FKBX-type 16KD peptidyl-prolyl cis-trans isomerase similar to Yersinia pestis KIM slpA. Contains Peptidylprolyl isomerase%2C FKBP-type (Interpro|IPR001179) gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3703 YP_3704 YP3704 fkpB fkpB 4216979 4217488 - FKBP-type peptidyl-prolyl cis-trans isomerase similar to Yersinia pestis CO92 fkpB and Yersinia pestis KIM lspA. Contains Signal peptidase II%2C family A8 (Interpro|IPR001872%2C (GO:0016020)) gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3704 YP_3705 YP3705 ileS ileS 4217488 4220304 - isoleucyl-tRNA synthetase similar to Yersinia pestis CO92 ileS and Yersinia pestis KIM ileS. Contains Aminoacyl-tRNA synthetase%2C class I (Interpro|IPR001412%2C (GO:0006418)). Contains Aminoacyl-tRNA synthetase%2C class Ia (Interpro|IPR002300%2C (GO:0006418)). Contains Isoleucyl-tRNA synthetase%2C class Ia (Interpro|IPR002301%2C (GO:0006428)) gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3705 YP_3706 YP3706 ribF ribF 4220336 4221274 - riboflavin biosynthesis protein similar to Yersinia pestis CO92 ribF and Yersinia pestis KIM ribF. Contains Riboflavin kinase / FAD synthetase (Interpro|IPR002606%2C (GO:0009231))%3B includes: riboflavin kinase and FMN adenyltransferase gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3706 YP_3708 YP3708 rpsT rpsT 4221689 4221952 + 30S ribosomal protein S20 similar to Yersinia pestis CO92 rpsT and Yersinia pestis KIM rpsT. Contains Ribosomal protein S20 (Interpro|IPR002583%2C (GO:0006412)) gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3708 YP_3709 YP3709 nhaR nhaR 4222083 4222982 - transcriptional activator protein NhaR similar to Yersinia pestis CO92 nhaR and Yersinia pestis KIM nhaR. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)) gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3709 YP_3710 YP3710 nhaA nhaA 4223112 4224296 - sodium-proton antiporter similar to Yersinia pestis CO92 nhaA and Yersinia pestis KIM nhaA. Contains Na+/H+ antiporter NhaA (Interpro|IPR004670%2C (GO:0006885)%2C (GO:0016021)) gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3710 YP_3711 YP3711 dnaJ2 dnaJ2 4224539 4225678 - chaperone protein DnaJ similar to Yersinia pestis CO92 dnaJ and Yersinia pestis KIM dnaJ. Contains Cytochrome c heme-binding site (Interpro|IPR000345%2C (GO:0006118)). Contains DnaJ central domain (CXXCXGXG) (Interpro|IPR001305%2C (GO:0003754)). Contains Heat shock protein DnaJ%2C N-terminal (Interpro|IPR001623). Contains Chaperone DnaJ%2C C-terminal (Interpro|IPR002939%2C (GO:0003754)). Contains Heat shock protein DnaJ (Interpro|IPR003095%2C (GO:0003754)) gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3711 YP_3712 YP3712 dnaK2 dnaK2 4225790 4227700 - chaperone protein DnaK similar to Yersinia pestis CO92 dnaK and Yersinia pestis KIM dnaK. Contains Heat shock protein Hsp70 (Interpro|IPR001023) gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3712 YP_3713 YP3713 YP_3713 4228074 4228664 + putative membrane protein similar to Yersinia pestis CO92 YPO0467 and Yersinia pestis KIM y3707. Contains GPR1/FUN34/yaaH family (Interpro|IPR000791%2C (GO:0016020)) gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3713 YP_3714 YP3714 YP_3714 4228973 4231420 + hypothetical protein similar to Yersinia pestis CO92 YPO0466 and Yersinia pestis KIM y3708. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)). Contains Beta and gamma crystallin (Interpro|IPR001064) gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3714 YP_3715 YP3715 proP31 proP31 4231490 4232878 - putative transport protein similar to Yersinia pestis CO92 YPO0465 and Yersinia pestis KIM y3709. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3715 YP_3716 YP3716 mogA mogA 4233006 4233593 - molybdopterin biosynthesis protein similar to Yersinia pestis CO92 mogA and Yersinia pestis KIM mog. Contains Molybdenum cofactor biosynthesis protein (Interpro|IPR001453%2C (GO:0006777)) gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3716 YP_3717 YP3717 YP_3717 4233679 4233837 - hypothetical protein similar to Yersinia pestis KIM y3711. gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3717 YP_3718 YP3718 talB talB 4233881 4234873 - transaldolase B similar to Yersinia pestis KIM talB. Contains Transaldolase (Interpro|IPR001585%2C (GO:0005975)%2C (GO:0016228)). Contains Transaldolase AB (Interpro|IPR004730%2C (GO:0006098)) gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3718 YP_3719 YP3719 YP_3719 4234901 4235083 - hypothetical protein similar to Yersinia pestis KIM y3713. gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3719 YP_3720 YP3720 YP_3720 4235363 4236142 + hypothetical protein similar to Yersinia pestis KIM y3714. Contains Beta and gamma crystallin (Interpro|IPR001064). Contains Protein of unknown function DUF328 (Interpro|IPR005583) gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3720 YP_3721 YP3721 thrC thrC 4236959 4238248 - threonine synthase similar to Yersinia pestis CO92 thrC and Yersinia pestis KIM thrC. Contains Serine/threonine dehydratase%2C pyridoxal-phosphate attachment site (Interpro|IPR000634%2C (GO:0006520)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)). Contains Threonine synthase (Interpro|IPR004450%2C (GO:0009088)) gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3721 YP_3722 YP3722 thrB thrB 4238252 4239202 - homoserine kinase similar to Yersinia pestis KIM thrB. Contains Homoserine kinase (Interpro|IPR000870%2C (GO:0006566)). Contains Galactokinase/homoserine kinase (Interpro|IPR001174%2C (GO:0016301)). Contains GHMP kinase%2C ATP-binding region (Interpro|IPR006203%2C (GO:0005524)). Contains GHMP kinase (Interpro|IPR006204). Contains Mevalonate and galactokinase (Interpro|IPR006206%2C (GO:0016773)) gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3722 YP_3723 YP3723 thrA thrA 4239184 4241637 - bifunctional aspartokinase/homoserine dehydrogenase I similar to Yersinia pestis CO92 thrA and Yersinia pestis KIM thrA. Contains Aspartate/glutamate/uridylate kinase (Interpro|IPR001048%2C (GO:0008652)). Contains Aspartate kinase (Interpro|IPR001341%2C (GO:0008652)). Contains Homoserine dehydrogenase (Interpro|IPR001342%2C (GO:0008652)). Contains Amino acid-binding ACT (Interpro|IPR002912%2C (GO:0008152)%2C (GO:0016597)). Contains Homoserine dehydrogenase%2C NAD binding domain (Interpro|IPR005106) gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3723 YP_3725 YP3725 arcA arcA 4242747 4243463 + aerobic respiration control protein similar to Yersinia pestis CO92 arcA and Yersinia pestis KIM arcA. Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Transcriptional regulatory protein%2C C terminal (Interpro|IPR001867%2C (GO:0006355)) gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3725 YP_3726 YP3726 creA creA 4243637 4244104 - putative exported protein similar to Yersinia pestis CO92 YPO0457 and Yersinia pestis KIM creA gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3726 YP_3727 YP3727 rob rob 4244330 4245196 + putative right origin-binding protein similar to Yersinia pestis CO92 YPO0456 and Yersinia pestis KIM rob. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3727 YP_3728 YP3728 gpmB gpmB 4245193 4245840 - putative phosphoglycerate mutase similar to Yersinia pestis CO92 gpmB and Yersinia pestis KIM gpmB. Contains Phosphoglycerate/bisphosphoglycerate mutase (Interpro|IPR001345%2C (GO:0008152)) gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3728 YP_3729 YP3729 YP_3729 4245934 4246476 + hypothetical protein similar to Yersinia pestis CO92 YPO0454 and Yersinia pestis KIM y3725. Contains Protein of unknown function DUF84 (Interpro|IPR002786) gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3729 YP_3730 YP3730 trpR trpR 4246473 4246874 - putative Trp operon repressor similar to Yersinia pestis CO92 trpR and Yersinia pestis KIM trpR. Contains Trp repressor (Interpro|IPR000831%2C (GO:0006355)) gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3730 YP_3731 YP3731 slt slt 4247120 4249069 - putative soluble lytic murein transglycosylase similar to Yersinia pestis CO92 YPO0452 and Yersinia pestis KIM slt. Contains SLT domain (Interpro|IPR000189). Contains Apoptosis regulator Bcl-2 protein%2C BH (Interpro|IPR000712%2C (GO:0006915)%2C (GO:0016329)) gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3731 YP_3732 YP3732 mgtA mgtA 4249609 4252335 + putative cation-transporting P-type ATPase similar to Yersinia pestis CO92 YPO0451 and Yersinia pestis KIM y3728. Contains H+ transporting ATPase%2C proton pump (Interpro|IPR000695%2C (GO:0016020)). Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Cation transporting ATPase%2C N terminal (Interpro|IPR004014%2C (GO:0006812)%2C (GO:0016020)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains Cation transporting ATPase%2C C-terminal (Interpro|IPR006068%2C (GO:0006812)%2C (GO:0016020)). Contains Cation transporting ATPase (Interpro|IPR006069%2C (GO:0006812)%2C (GO:0016020)) gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3732 YP_3733 YP3733 YP_3733 4252710 4253333 + putative membrane protein similar to Yersinia pestis CO92 YPO0450 and Yersinia pestis KIM y3729 gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3733 YP_3734 YP3734 YP_3734 4253354 4254631 + putative exported protein similar to Yersinia pestis CO92 YPO0449 and Yersinia pestis KIM y3730. Contains GGDEF (Interpro|IPR000160%2C (GO:0005554)). Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)) gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3734 YP_3735 YP3735 ompA5 ompA5 4254637 4255143 + putative lipoprotein similar to Yersinia pestis CO92 YPO0448 and Yersinia pestis KIM y3731. Contains MotY protein (Interpro|IPR001035%2C (GO:0001539)%2C (GO:0009288)). Contains Bacterial outer membrane protein (Interpro|IPR006664). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3735 YP_3736 YP3736 uup4 uup4 4255326 4256993 + ATPase components of ABC transporters with duplicated ATPase domains Best Blastp hit %3D gi|15804962|ref|NP_291004.1| (NC_002655) putative ATP-binding component of ABC transport system [Escherichia coli O157:H7 EDL933]%2C gi|15834603|ref|NP_313376.1| (NC_002695) putative ATP-binding component of a transport system [Escherichia coli O157:H7]%2C gi|16132208|ref|NP_418808.1| (NC_000913) putative ATP-binding component of a transport system [Escherichia coli K12]%2C gi|2851615|sp|P37797|YJJK_ECOLI ABC transporter ATP-binding protein yjjK%2C gi|7445921|pir||F65254 ABC transporter in nadR-slt intergenic region - Escherichia coli (strain K-12)%2C gi|2367384|gb|AAC77344.1| (AE000509) putative ATP-binding component of a transport system [Escherichia coli K12]%2C gi|12519420|gb|AAG59571.1|AE005670_4 (AE005670) putative ATP-binding component of ABC transport system [Escherichia coli O157:H7 EDL933]%2C gi|13364827|dbj|BAB38772.1| (AP002569) putative ATP-binding component of a transport system [Escherichia coli O157:H7]%2C(len:555 aa)%3B. Contains ATP/GTP-binding site motif A (P-loop) (Int gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3736 YP_3737 YP3737 YP_3737 4257139 4258308 - hypothetical protein similar to Yersinia pestis CO92 YPO0445 and Yersinia pestis KIM y3735. Contains Filamentation induced by cAMP protein Fic (Interpro|IPR003812%2C (GO:0000074)) gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3737 YP_3738 YP3738 nadR nadR 4258426 4259697 - transcriptional regulator NadR similar to Yersinia pestis CO92 nadR. Contains Glycoside hydrolase%2C family 4 (Interpro|IPR001088%2C (GO:0005975)). Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Coenzyme A biosynthesis protein (Interpro|IPR001980%2C (GO:0015937)). Contains Aldehyde dehydrogenase (Interpro|IPR002086%2C (GO:0008152)%2C (GO:0016491)). Contains Cytidyltransferase-related domain (Interpro|IPR004821). Contains Nicotinamide-nucleotide adenylyltransferase (Interpro|IPR006417) gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3738 YP_3739 YP3739 radA radA 4259856 4261238 - DNA repair protein RadA similar to Yersinia pestis CO92 radA and Yersinia pestis KIM sms. Contains RecA bacterial DNA recombination protein (Interpro|IPR001553%2C (GO:0008094)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ATP-dependent serine protease%2C Lon family (Interpro|IPR001984%2C (GO:0006508)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains DNA repair protein RadA (Interpro|IPR004504%2C (GO:0006281)) gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3739 YP_3740 YP3740 serB3 serB3 4261326 4262306 - phosphoserine phosphatase similar to Yersinia pestis CO92 serB and Yersinia pestis KIM serB. Contains Phosphoserine phosphatase SerB (Interpro|IPR004469%2C (GO:0006564)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IB (PSPase-like) (Interpro|IPR006383) gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3740 YP_3741 YP3741 smp smp 4262538 4263239 + putative membrane protein similar to Yersinia pestis CO92 smp and Yersinia pestis KIM smp gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3741 YP_3742 YP3742 deoD deoD 4263351 4264076 - purine nucleoside phosphorylase similar to Yersinia pestis CO92 deoD and Yersinia pestis KIM deoD. Contains Purine and other phosphorylases%2C family 1 (Interpro|IPR000845%2C (GO:0009116)). Contains Purine nucleoside phosphorylase (Interpro|IPR004402%2C (GO:0006139)) gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3742 YP_3743 YP3743 deoB deoB 4264195 4265484 - phosphopentomutase similar to Yersinia pestis KIM deoB. Contains Metalloenzyme (Interpro|IPR006124%2C (GO:0005505)) gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3743 YP_3744 YP3744 deoA deoA 4265550 4266968 - Thymidine phosphorylase Best Blastp hit %3D gi|16763363|ref|NP_458980.1| (NC_003198) thymidine phosphorylase [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|16767809|ref|NP_463424.1| (NC_003197) thymidine phosphorylase [Salmonella typhimurium LT2]%2C gi|16423134|gb|AAL23383.1| (AE008915) thymidine phosphorylase [Salmonella typhimurium LT2]%2C gi|16505672|emb|CAD03403.1| (AL627284) thymidine phosphorylase [Salmonella enterica subsp. enterica serovar Typhi]%2C(len:440 aa)%3B. Contains Thymidine/pyrimidine-nucleoside phosphorylase (Interpro|IPR000053%2C (GO:0006206)). Contains Glycosyl transferase%2C family 3 (Interpro|IPR000312%2C (GO:0008152)%2C (GO:0016757)) gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3744 YP_3745 YP3745 deoC2 deoC2 4266993 4267805 - deoxyribose-phosphate aldolase similar to Yersinia pestis CO92 deoC and Yersinia pestis KIM deoC. Contains Deoxyribose-phosphate aldolase (Interpro|IPR002915%2C (GO:0016228)). Contains Deoxyribose-phosphate aldolase (Interpro|IPR002915%2C (GO:0016228)) gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3745 YP_3746 YP3746 nupC2 nupC2 4268366 4269673 - putative Na+ dependent nucleosidetransporter-family protein similar to Yersinia pestis CO92 YPO0435 and Yersinia pestis KIM y3744. Contains Na+ dependent nucleoside transporter (Interpro|IPR002668%2C (GO:0016020)) gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3746 YP_3747 YP3747 tatD4 tatD4 4270172 4270984 - putative metalloenzyme similar to Yersinia pestis CO92 YPO0434 and Yersinia pestis KIM y3745. Contains TatD-related deoxyribonuclease (Interpro|IPR001130) gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3747 YP_3748 YP3748 rssA2 rssA2 4270997 4272268 - putative esterase of the alpha-beta hydrolase superfamily similar to Yersinia pestis CO92 YPO0433 and Yersinia pestis KIM y3746. Contains Patatin (Interpro|IPR002641%2C (GO:0045735)) gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3748 YP_3750 YP3750 osmY2 osmY2 4272670 4273284 - osmotically inducible protein Y similar to Yersinia pestis CO92 osmY and Yersinia pestis KIM osmY. Contains Transport-associated domain (Interpro|IPR007055) gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3750 YP_3751 YP3751 prfC prfC 4273611 4275200 - peptide chain release factor 3 similar to Yersinia pestis CO92 prfC and Yersinia pestis KIM prfC. Contains Elongation factor%2C GTP-binding (Interpro|IPR000795%2C (GO:0006414)). Contains Elongation factor Tu%2C domain 2 (Interpro|IPR004161%2C (GO:0005525)). Contains Peptide chain release factor 3 (Interpro|IPR004548%2C (GO:0016149)). Contains Small GTP-binding protein domain (Interpro|IPR005225) gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3751 YP_3752 YP3752 rimI3 rimI3 4275379 4275864 - ribosomal-protein-alanine acetyltransferase similar to Yersinia pestis CO92 rimI and Yersinia pestis KIM rimI. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)). Contains Ribosomal-protein-alanine acetyltransferase (Interpro|IPR006464) gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3752 YP_3753 YP3753 holD holD 4275767 4276204 - DNA polymerase III%2C psi subunit similar to Yersinia pestis CO92 YPO0428. Contains DNA polymerase III psi subunit (Interpro|IPR004615%2C (GO:0008408)) gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3753 YP_3754 YP3754 rsmC2 rsmC2 4276317 4277360 + ribosomal RNA small subunit methyltransferase C similar to Yersinia pestis CO92 rsmC and Yersinia pestis KIM y3753. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C N12 class (Interpro|IPR002296%2C (GO:0008170)) gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3754 YP_3755 YP3755 proP32 proP32 4277873 4278205 - Permeases of the major facilitator superfamily similar to Yersinia pestis KIM y3754. gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3755 YP_3756 YP3756 hmsT hmsT 4278454 4279626 + HmsT protein similar to Yersinia pestis CO92 hmsT and Yersinia pestis KIM hmsT. Contains GGDEF (Interpro|IPR000160%2C (GO:0005554)) gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3756 YP_3757 YP3757 YP_3757 4280167 4281252 - putative pectinesterase similar to Yersinia pestis CO92 YPO0424 and Yersinia pestis KIM y3757. Contains Pectinesterase (Interpro|IPR000070%2C (GO:0004759)) gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3757 YP_3758 YP3758 YP_3758 4281561 4281908 + hypothetical protein similar to Yersinia pestis CO92 YPO0423 and Yersinia pestis KIM y3758. gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3758 YP_3759 YP3759 YP_3759 4282055 4282387 + hypothetical protein similar to Yersinia pestis CO92 YPO0422 gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3759 YP_3760 YP3760 mexB mexB 4282748 4285834 - putative multi-drug efflux protein similar to Yersinia pestis CO92 YPO0421 and Yersinia pestis KIM mexB. Contains Polycystic kidney disease type 1 protein (Interpro|IPR000434). Contains Acriflavin resistance protein (Interpro|IPR001036) gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3760 YP_3761 YP3761 acrA10 acrA10 4285834 4286916 - putative lipoprotein similar to Yersinia pestis CO92 YPO0420 and Yersinia pestis KIM y3760. Contains Gram-negative bacterial RTX secretion protein D (Interpro|IPR003997%2C (GO:0009306)%2C (GO:0016020)) gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3761 YP_3762 YP3762 YP_3762 4286968 4287201 - putative exported protein similar to Yersinia pestis CO92 YPO0419 and Yersinia pestis KIM y3761. gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3762 YP_3764 YP3764 rfaL rfaL 4288011 4289243 - putative O-antigen biosynthesis protein similar to Yersinia pestis CO92 YPO0417 and Yersinia pestis KIM y3762. Contains O-antigen polymerase (Interpro|IPR007016) gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3764 YP_3765 YP3765 rfaQ rfaQ 4289291 4290484 - putative lipopolysaccharide core biosynthesis protein similar to Yersinia pestis CO92 YPO0416 and Yersinia pestis KIM rfaQ. Contains Glycosyl transferase%2C family 9 (Interpro|IPR002201) gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3765 YP_3766 YP3766 xylB3 xylB3 4290800 4292431 - putative carbohydrate kinase similar to Yersinia pestis CO92 YPO0415 and Yersinia pestis KIM y3764. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)) gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3766 YP_3767 YP3767 deoR4 deoR4 4292563 4293483 - putative regulatory protein Best Blastp hit %3D gi|16762362|ref|NP_457979.1| (NC_003198) putative regulatory protein [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|16504666|emb|CAD09550.1| (AL627279) putative regulatory protein [Salmonella enterica subsp. enterica serovar Typhi]%2C(len:319 aa)%3B. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)). Contains Rhodopsin-like GPCR superfamily (Interpro|IPR000276%2C (GO:0016021)). Contains Bacterial regulatory protein%2C Crp family (Interpro|IPR001808%2C (GO:0006355)) gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3767 YP_3768 YP3768 YP_3768 4293482 4293793 + putative membrane protein similar to Yersinia pestis CO92 YPO0413 and similar to Yersinia pestis KIM y3767 (residues 7 to 103 of 103 are similar to residues 1 to 97 of 97 from Yersinia pestis KIM y3767) gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3768 YP_3769 YP3769 mglA9 mglA9 4293834 4295486 + putative ABC transporter ATP-binding protein similar to Yersinia pestis CO92 YPO0412 and Yersinia pestis KIM y3769. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3769 YP_3770 YP3770 araH14 araH14 4295480 4296535 + putative ABC transporter permease protein similar to Yersinia pestis CO92 YPO0411 and Yersinia pestis KIM y3770. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)). Contains Blood group Rhesus C/E and D polypeptide (Interpro|IPR002229) gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3770 YP_3771 YP3771 araH15 araH15 4296532 4297533 + putative ABC transporter permease protein similar to Yersinia pestis CO92 YPO0410 and Yersinia pestis KIM y3771. Contains Myelin P0 protein (Interpro|IPR000920). Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3771 YP_3772 YP3772 rbsB12 rbsB12 4297585 4298604 + putative periplasmic solute-binding protein similar to Yersinia pestis CO92 YPO0409 gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3772 YP_3773 YP3773 fbaB fbaB 4298660 4299535 + putative aldolase similar to Yersinia pestis CO92 YPO0408 and Yersinia pestis KIM y3773. Contains Beta and gamma crystallin (Interpro|IPR001064). Contains Deoxyribose-phosphate aldolase (Interpro|IPR002915%2C (GO:0016228)) gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3773 YP_3774 YP3774 YP_3774 4299599 4299889 + hypothetical protein similar to Yersinia pestis CO92 YPO0407 and Yersinia pestis KIM y3774. Contains Protein of unknown function DUF176 (Interpro|IPR003771) gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3774 YP_3775 YP3775 YP_3775 4300190 4300681 + putative exported protein similar to Yersinia pestis CO92 YPO0406 and Yersinia pestis KIM y3775 gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3775 YP_3776 YP3776 ptsA ptsA 4300743 4303400 - putative phosphoenolpyruvate-protein phosphotransferase similar to Yersinia pestis CO92 YPO0405 and Yersinia pestis KIM ptsA. Contains Phosphocarrier HPr protein (Interpro|IPR000032%2C (GO:0009401)). Contains PEP-utilizing enzyme (Interpro|IPR000121%2C (GO:0016310)%2C (GO:0016772)). Contains Histidine phosphorylation site in HPr protein (Interpro|IPR001020%2C (GO:0009401)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 (Interpro|IPR002178%2C (GO:0009401)). Contains PTS system IIA component fructose subfamily (Interpro|IPR004715%2C (GO:0016021)). Contains Phosphoenolpyruvate-protein phosphotransferase (Interpro|IPR006318) gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3776 YP_3777 YP3777 frwC frwC 4303663 4304748 + PTS system%2C IIC component similar to Yersinia pestis CO92 YPO0404 and Yersinia pestis KIM frwC. Contains Phosphotransferase system%2C EIIC (Interpro|IPR003352%2C (GO:0016020)). Contains PTS fructose IIC component (Interpro|IPR006327) gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3777 YP_3778 YP3778 frwB frwB 4305089 4305409 + PTS system%2C IIB component similar to Yersinia pestis CO92 YPO0403 and Yersinia pestis KIM frwB. Contains Phosphotransferase system PTS%2C fructose-specific IIB subunit (Interpro|IPR003353%2C (GO:0016020)) gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3778 YP_3779 YP3779 frwD frwD 4305439 4305846 + PTS system%2C IIB component similar to Yersinia pestis CO92 YPO0402 and Yersinia pestis KIM frwD. Contains Phosphotransferase system PTS%2C fructose-specific IIB subunit (Interpro|IPR003353%2C (GO:0016020)) gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3779 YP_3780 YP3780 araC7 araC7 4305839 4306714 - putative transcriptional regulator similar to Yersinia pestis CO92 YPO0401 and Yersinia pestis KIM y3781. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3780 YP_3781 YP3781 YP_3781 4306716 4307252 - hypothetical protein similar to Yersinia pestis CO92 YPO0400 and Yersinia pestis KIM y3782 gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3781 YP_3782 YP3782 YP_3782 4307958 4309154 + putative membrane protein similar to Yersinia pestis CO92 YPO0399 and Yersinia pestis KIM y3783. Contains Tetracycline resistance protein (Interpro|IPR001958%2C (GO:0016021)). Contains Mitochondrial substrate carrier (Interpro|IPR001993%2C (GO:0006810)) gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3782 YP_3783 YP3783 htpX4 htpX4 4309165 4310211 + M48 peptidase family protein similar to Yersinia pestis CO92 YPO0398 and Yersinia pestis KIM y3784. Contains Peptidase family M48 (Interpro|IPR001915%2C (GO:0016020)) gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3783 YP_3784 YP3784 YP_3784 4310357 4311511 - hypothetical protein similar to Yersinia pestis CO92 YPO0397 and Yersinia pestis KIM y3785. gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3784 YP_3785 YP3785 sbcC3 sbcC3 4311508 4312896 - ATPase involved in DNA repair similar to Yersinia pestis KIM y3786 gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3785 YP_3786 YP3786 YP_3786 4312961 4313158 + hypothetical protein similar to Yersinia pestis KIM y3788. gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3786 YP_3787 YP3787 YP_3787 4313360 4313647 + hypothetical protein similar to Yersinia pestis CO92 YPO0394 and Yersinia pestis KIM y3789 gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3787 YP_3788 YP3788 YP_3788 4313991 4315364 - hypothetical protein similar to Yersinia pestis CO92 YPO0393 and Yersinia pestis KIM y3790. gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3788 YP_3789 YP3789 mutL2 mutL2 4315336 4316058 - DNA mismatch repair enzyme (predicted ATPase) similar to Yersinia pestis CO92 YPO0392 and Yersinia pestis KIM y3791. Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)) gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3789 YP_3790 YP3790 YP_3790 4316108 4317439 - modification methylase similar to Yersinia pestis CO92 YPO0391 and Yersinia pestis KIM y3792. Contains N6 adenine-specific DNA methyltransferase%2C N12 class (Interpro|IPR002296%2C (GO:0008170)) gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3790 YP_3793 YP3793 YP_3793 4318463 4319779 - hypothetical protein similar to Yersinia pestis CO92 YPO0388 and Yersinia pestis KIM y3796 gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3793 YP_3794 YP3794 mcrB mcrB 4319776 4321839 - GTPase subunit of restriction endonuclease similar to Yersinia pestis CO92 YPO0387 and similar to Yersinia pestis KIM y3797(residues 1 to 687 of 687 are similar to residues 2 to 688 of 688 from Yersinia pestis KIM y3797). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3794 YP_3795 YP3795 YP_3795 4321973 4322995 + transposase for insertion sequence IS100 similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3795 YP_3796 YP3796 dnaC_29 dnaC_29 4322992 4323774 + insertion sequence IS100%2C ATP-binding protein similar to Yersinia pestis CO92 YPO4009 and Yersinia pestis KIM y4030. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3796 YP_3797 YP3797 YP_3797 4323844 4324725 + similar to Yersinia pestis KIM y0112.%2C residue 18 to 311 are aslo similar to gi|16766532|ref|NP_462147.1| putative glutathione S-transferase [Salmonella typhimurium LT2] pseudogene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3797 YP_3798 YP3798 lysR21 lysR21 4324856 4325749 - lysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3545 and Yersinia pestis KIM y0113. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)). Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3798 YP_3799 YP3799 YP_3799 4326011 4326715 + Pirin-related protein similar to Yersinia pestis CO92 YPO3546 and Yersinia pestis KIM y0115. Contains Protein of unknown function DUF209 (Interpro|IPR003829) gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3799 YP_3801 YP3801 YP_3801 4327652 4328551 - putative tetrapyrrole methylase similar to Yersinia pestis CO92 YPO3547 and Yersinia pestis KIM y0117. Contains Protein of unknown function UPF0011 (Interpro|IPR000578%2C (GO:0005554)). Contains Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (Interpro|IPR000878%2C (GO:0008152)%2C (GO:0008168)) gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3801 YP_3802 YP3802 lppC lppC 4328518 4330587 + putative glycosylase similar to Yersinia pestis KIM y0118. Contains Vinculin/alpha-catenin (Interpro|IPR006077) gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3802 YP_3803 YP3803 YP_3803 4330671 4331024 + putative endonuclease distantly related to archaeal Holliday junction resolvase similar to Yersinia pestis CO92 YPO3549 and Yersinia pestis KIM y0119. Contains Protein of unknown function UPF0102 (Interpro|IPR003509) gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3803 YP_3804 YP3804 gmhA gmhA 4331295 4331885 + putative phosphosugar isomerase similar to Yersinia pestis CO92 YPO3550 and Yersinia pestis KIM y0122. Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)). Contains Phosphoheptose isomerase (Interpro|IPR004515%2C Cellular Component: cytoplasm (GO:0005737)%2C (GO:0009244)) gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3804 YP_3805 YP3805 osmY3 osmY3 4331896 4332471 + putative exported protein similar to Yersinia pestis CO92 YPO3551. Contains Transport-associated domain (Interpro|IPR007055) gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3805 YP_3806 YP3806 mtgA mtgA 4332678 4333403 - monofunctional biosynthetic peptidoglycan transglycosylase similar to Yersinia pestis CO92 mtgA and Yersinia pestis KIM mtgA. Contains Glycosyl transferase%2C family 51 (Interpro|IPR001264%2C (GO:0009274)) gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3806 YP_3807 YP3807 elbB elbB 4333400 4334053 - enhancing lycopene biosynthesis protein 2 similar to Yersinia pestis CO92 elbB and Yersinia pestis KIM y0125. Contains Family of unknown function ThiJ/PfpI (Interpro|IPR002818) gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3807 YP_3809 YP3809 arcB arcB 4334295 4336631 - aerobic respiration control sensor/response regulatory protein similar to Yersinia pestis CO92 arcB and Yersinia pestis KIM arcB. Contains PAS domain (Interpro|IPR000014%2C (GO:0007165)). Contains PAS-associated C-terminal domain (Interpro|IPR000700%2C (GO:0000160)). Contains Response regulator receiver (Interpro|IPR001789%2C (GO:0006355)). Contains Hpt domain (Interpro|IPR002570%2C (GO:0007165)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains Histidine kinase A%2C N-terminal (Interpro|IPR003661%2C (GO:0016020)). Contains Bacterial sensor protein%2C C-terminal (Interpro|IPR004358%2C (GO:0007165)). Contains Histidine kinase (Interpro|IPR005467%2C (GO:0007165)%2C (GO:0016301)) gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3809 YP_3810 YP3810 YP_3810 4336895 4337884 - putative Fe-S oxidoreductases similar to Yersinia pestis CO92 YPO3556 and Yersinia pestis KIM y0127. Contains Conserved hypothetical protein 1212 (Interpro|IPR005911). Contains Elongator protein 3/MiaB/NifB (Interpro|IPR006638) gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3810 YP_3811 YP3811 gltB gltB 4338491 4343098 + glutamate synthase [NADPH] large chain precursor similar to Yersinia pestis CO92 gltB and Yersinia pestis KIM gltB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Domain of unknown function DUF14 (Interpro|IPR002489). Contains Ferredoxin-dependent glutamate synthase (Interpro|IPR002932%2C (GO:0006537)%2C (GO:0015930)). Contains FMN/related compound-binding core (Interpro|IPR003009). Contains Glutamate synthase amidotransferase domain (Interpro|IPR006981). Contains Glutamate synthase central domain (Interpro|IPR006982) gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3811 YP_3812 YP3812 gltD2 gltD2 4343108 4344526 + glutamate synthase [NADPH] small chain similar to Yersinia pestis CO92 gltD. Contains Pyridine nucleotide-disulphide oxidoreductase%2C class-II (Interpro|IPR000103%2C (GO:0006118)%2C (GO:0008246)). Contains NAD binding site (Interpro|IPR000205). Contains Adrenodoxin reductase (Interpro|IPR000759%2C (GO:0006118)). Contains Flavin-containing monooxygenase FMO (Interpro|IPR000960%2C (GO:0006118)). Contains Pyridine nucleotide-disulphide oxidoreductase%2C class I (Interpro|IPR001100%2C (GO:0006118)%2C (GO:0008246)). Contains FAD-dependent pyridine nucleotide-disulphide oxidoreductase (Interpro|IPR001327%2C (GO:0006118)%2C (GO:0015036)). Contains Glutamate synthase%2C NADH/NADPH%2C small subunit 2 (Interpro|IPR006006%2C (GO:0006537)%2C (GO:0016639)) gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3812 YP_3813 YP3813 YP_3813 4344967 4345452 + hypothetical protein similar to Yersinia pestis KIM y0130 gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3813 YP_3814 YP3814 sspB sspB 4345605 4346120 - putative stringent starvation protein B similar to Yersinia pestis CO92 sspB and Yersinia pestis KIM sspB gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3814 YP_3815 YP3815 sspA sspA 4346126 4346767 - putative stringent starvation protein A similar to Yersinia pestis CO92 sspA and Yersinia pestis KIM sspA. Contains Glutathione S-transferase%2C N-terminal (Interpro|IPR004045). Contains Glutathione S-transferase%2C C-terminal (Interpro|IPR004046) gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3815 YP_3816 YP3816 YP_3816 4346947 4347144 + hypothetical protein no significant database match found gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3816 YP_3817 YP3817 rpsI rpsI 4347141 4347539 - 30S ribosomal subunit protein S9 similar to Yersinia pestis KIM rpsI. Contains Ribosomal protein S9 (Interpro|IPR000754%2C (GO:0006412)) gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3817 YP_3818 YP3818 rplM rplM 4347548 4347991 - 50S ribosomal protein L13 similar to Yersinia pestis CO92 rplM and Yersinia pestis KIM rplM. Contains Ribosomal protein L13 (Interpro|IPR005822%2C (GO:0006412)). Contains Ribosomal protein L13%2C bacterial and organelle form (Interpro|IPR005823%2C (GO:0006412)) gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3818 YP_3819 YP3819 YP_3819 4348290 4349429 - putative ATPase similar to Yersinia pestis CO92 YPO3564 and Yersinia pestis KIM y0135. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AFG1-like ATPase (Interpro|IPR005654) gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3819 YP_3820 YP3820 YP_3820 4349641 4350045 + putative membrane protein similar to Yersinia pestis CO92 YPO3565 and Yersinia pestis KIM y0136 gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3820 YP_3821 YP3821 degQ degQ 4350316 4351689 + protease similar to Yersinia pestis CO92 degQ. Contains Serine proteases%2C V8 family (Interpro|IPR000126%2C (GO:0006508)%2C (GO:0008236)). Contains Serine protease%2C trypsin family (Interpro|IPR001254%2C (GO:0006508)). Contains PDZ/DHR/GLGF domain (Interpro|IPR001478%2C (GO:0007242)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains HtrA/DegQ protease (Interpro|IPR001940%2C (GO:0006508)) gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3821 YP_3822 YP3822 tnp_43 tnp_43 4351806 4352315 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3822 YP_3823 YP3823 degS degS 4352490 4353578 + protease similar to Yersinia pestis CO92 degS and Yersinia pestis KIM degS. Contains Serine proteases%2C V8 family (Interpro|IPR000126%2C (GO:0006508)%2C (GO:0008236)). Contains Serine protease%2C trypsin family (Interpro|IPR001254%2C (GO:0006508)). Contains PDZ/DHR/GLGF domain (Interpro|IPR001478%2C (GO:0007242)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains HtrA/DegQ protease (Interpro|IPR001940%2C (GO:0006508)) gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3823 YP_3824 YP3824 murA murA 4353759 4355021 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase similar to Yersinia pestis CO92 murA and Yersinia pestis KIM murA. Contains EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) (Interpro|IPR001986). Contains UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Interpro|IPR005750%2C (GO:0019277)) gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3824 YP_3825 YP3825 bolA2 bolA2 4355175 4355438 - BolA-like protein similar to Yersinia pestis CO92 YPO3570 and Yersinia pestis KIM y0141. Contains BolA-like protein (Interpro|IPR002634) gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3825 YP_3826 YP3826 YP_3826 4355576 4355878 - putative anti-sigma B factor antagonist similar to Yersinia pestis CO92 YPO3571 and Yersinia pestis KIM y0142. Contains Sulfate transporter/antisigma-factor antagonist STAS (Interpro|IPR002645) gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3826 YP_3827 YP3827 YP_3827 4355914 4356537 - putative exported protein similar to Yersinia pestis CO92 YPO3572 and Yersinia pestis KIM y0143 gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3827 YP_3828 YP3828 YP_3828 4356550 4357107 - putative membrane protein similar to Yersinia pestis CO92 YPO3573 and Yersinia pestis KIM y0144. Contains Mce4/Rv3499c/MTV023.06c protein (Interpro|IPR003399) gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3828 YP_3829 YP3829 YP_3829 4357112 4357894 - putative membrane protein similar to Yersinia pestis CO92 YPO3574 and Yersinia pestis KIM y0145. Contains Protein of unknown function DUF140 (Interpro|IPR003453) gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3829 YP_3830 YP3830 YP_3830 4358112 4358930 - putative ABC transporter ATP-binding protein similar to Yersinia pestis CO92 YPO3575 and Yersinia pestis KIM y0146. Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3830 YP_3831 YP3831 YP_3831 4359195 4360169 + putative sodium/calcium exchanger protein similar to Yersinia pestis CO92 YPO3576 and Yersinia pestis KIM y0147. Contains Cl- channel%2C voltage gated (Interpro|IPR001807%2C (GO:0016020)). Contains K+-dependent Na+/Ca+ exchanger related-protein (Interpro|IPR004481). Contains Sodium/calcium exchanger membrane region (Interpro|IPR004837) gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3831 YP_3832 YP3832 gutQ1 gutQ1 4360193 4361266 + putative isomerase similar to Yersinia pestis KIM y0149. Contains CBS domain (Interpro|IPR000644). Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)). Contains KpsF/GutQ family protein (Interpro|IPR004800) gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3832 YP_3833 YP3833 YP_3833 4361515 4362078 + putative proteins of HAD superfamily%2C CMP-Neu5Ac homologs similar to Yersinia pestis CO92 YPO3578 and Yersinia pestis KIM y0150. Contains HAD-superfamily hydrolase%2C IIIA domain (Interpro|IPR006549) gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3833 YP_3834 YP3834 YP_3834 4362075 4362638 + putative exported protein similar to Yersinia pestis CO92 YPO3579 and Yersinia pestis KIM y0151 gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3834 YP_3835 YP3835 YP_3835 4362601 4363167 + hypothetical protein similar to Yersinia pestis CO92 YPO3580 and Yersinia pestis KIM y0152. Contains OstA-like protein (Interpro|IPR005653) gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3835 YP_3836 YP3836 YP_3836 4363174 4363899 + putative ABC transporter ATP-binding protein similar to Yersinia pestis CO92 YPO3581 and Yersinia pestis KIM y0153. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains 2-oxo acid dehydrogenase%2C acyltransferase component%2C lipoyl-binding (Interpro|IPR003016). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3836 YP_3837 YP3837 rpoN rpoN 4363961 4365394 + RNA polymerase sigma-54 factor similar to Yersinia pestis CO92 rpoN and Yersinia pestis KIM rpoN. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains Sigma-54 factor family (Interpro|IPR000394%2C (GO:0016987)). Contains Sigma-54 factor%2C core binding domain (Interpro|IPR007046) gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3837 YP_3838 YP3838 yhbH yhbH 4365418 4365705 + similar to Salmonella typhimurium probable sigma (54) modulation protein YhbH SW:RP5M_SALTY (P26983) (95 aa) and to Escherichia coli probable sigma (54) modulation protein YhbH SW:RP5M_ECOLI (P31221) (95 aa) There is a stop codon at position 36. The sequence has been checked and is believed to be correct. pseudogene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3838 YP_3839 YP3839 ptsN2 ptsN2 4365811 4366305 + nitrogen regulatory IIA protein similar to Yersinia pestis CO92 ptsN and Yersinia pestis KIM ptsN. Contains Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 (Interpro|IPR002178%2C (GO:0009401)). Contains PTS IIA-like nitrogen-regulatory protein PtsN (Interpro|IPR006320) gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3839 YP_3840 YP3840 YP_3840 4366611 4367465 + putative P-loop-containing kinase similar to Yersinia pestis CO92 YPO3586 and Yersinia pestis KIM y0158. Contains Uridine kinase (Interpro|IPR000764%2C (GO:0006224)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Uncharacterised P-loop ATPase protein family UPF0042 (Interpro|IPR005337) gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3840 YP_3841 YP3841 ptsO ptsO 4367462 4367734 + putative phosphocarrier protein similar to Yersinia pestis CO92 ptsO and Yersinia pestis KIM ptsO. Contains Phosphocarrier HPr protein (Interpro|IPR000032%2C (GO:0009401)). Contains Histidine phosphorylation site in HPr protein (Interpro|IPR001020%2C (GO:0009401)) gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3841 YP_3842 YP3842 pyrB pyrB 4368072 4369007 + aspartate carbamoyltransferase catalytic subunit similar to Yersinia pestis CO92 pyrB and Yersinia pestis KIM pyrB. Contains Aspartate carbamoyltransferase (Interpro|IPR002082%2C (GO:0009347)). Contains Ornithine carbamoyltransferase (Interpro|IPR002292%2C (GO:0009348)). Contains Aspartate/ornithine carbamoyltransferase (Interpro|IPR006130%2C (GO:0016597)%2C (GO:0016743)). Contains Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain (Interpro|IPR006131%2C (GO:0016597)%2C (GO:0016743)). Contains Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain (Interpro|IPR006132%2C (GO:0006520)%2C (GO:0016743)) gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3842 YP_3843 YP3843 pyrI pyrI 4369013 4369483 + aspartate carbamoyltransferase%2C regulatory subunit similar to Yersinia pestis KIM pyrI. Contains Aspartate carbamoyltransferase%2C regulatory chain (Interpro|IPR002801%2C (GO:0009347)) gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3843 YP_3844 YP3844 tdcF5 tdcF5 4369582 4370007 + Putative translation initiation inhibitor similar to Yersinia pestis KIM y0163. Contains YjgF-like protein (Interpro|IPR006056). Contains Endoribonuclease L-PSP (Interpro|IPR006175) gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3844 YP_3845 YP3845 YP_3845 4370420 4370782 + putative exported protein Best Blastp hit %3D gi|16123838|ref|NP_407151.1| (NC_003143) putative exported protein [Yersinia pestis]%2C gi|22124084|ref|NP_667507.1| (NC_004088) hypothetical [Yersinia pestis KIM]%2C gi|15981617|emb|CAC93167.1| (AJ414158) putative exported protein [Yersinia pestis]%2C gi|21956833|gb|AAM83758.1|AE013616_4 (AE013616) hypothetical [Yersinia pestis KIM]%2C(len:158 aa) gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3845 YP_3846 YP3846 treR treR 4371016 4371969 + trehalose operon repressor similar to Yersinia pestis CO92 treR and Yersinia pestis KIM treR. Contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C (GO:0006355)). Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3846 YP_3847 YP3847 treB treB 4372344 4373795 + PTS system%2C trehalose-specific IIBC component similar to Yersinia pestis CO92 treB and Yersinia pestis KIM treB. Contains Phosphotransferase system PTS%2C EIIB domain (Interpro|IPR001996%2C (GO:0016020)). Contains Phosphotransferase system%2C EIIC (Interpro|IPR003352%2C (GO:0016020)) gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3847 YP_3848 YP3848 treC treC 4373890 4375557 + putative trehalose-6-phosphate hydrolase similar to Yersinia pestis CO92 treC and Yersinia pestis KIM treC. Contains Glycoside hydrolase family 13 (Interpro|IPR006046%2C (GO:0005975)). Contains Alpha amylase%2C catalytic domain (Interpro|IPR006047%2C (GO:0005975)). Contains Alpha amylase%2C catalytic subdomain (Interpro|IPR006589%2C (GO:0005975)) gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3848 YP_3849 YP3849 rnk rnk 4375910 4376320 + regulator of nucleoside diphosphate kinase similar to Yersinia pestis CO92 rnk and Yersinia pestis KIM rnk gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3849 YP_3850 YP3850 YP_3850 4376544 4376936 - putative cytochrome similar to Yersinia pestis CO92 YPO3694 and Yersinia pestis KIM cybC. gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3850 YP_3851 YP3851 YP_3851 4377138 4377782 - hypothetical protein similar to Yersinia pestis KIM y0170 gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3851 YP_3852 YP3852 pmbA pmbA 4378031 4379371 - Putative modulator of DNA gyrase similar to Yersinia pestis CO92 pmbA and Yersinia pestis KIM pmbA. Contains Modulator of DNA gyrase (Interpro|IPR002510) gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3852 YP_3853 YP3853 YP_3853 4379552 4380100 + hypothetical protein similar to Yersinia pestis CO92 YPO3691 and Yersinia pestis KIM y0172. Contains Protein of unknown function DUF615 (Interpro|IPR006839) gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3853 YP_3854 YP3854 YP_3854 4380228 4380509 - putative ribonuclease inhibitor similar to Yersinia pestis CO92 YPO3690 and Yersinia pestis KIM y0173. Contains Barstar (barnase inhibitor) (Interpro|IPR000468%2C Cellular Component: intracellular (GO:0005622)%2C (GO:0008428)) gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3854 YP_3855 YP3855 YP_3855 4380514 4380987 - putative ribonuclease similar to Yersinia pestis KIM y0174. Contains Guanine-specific ribonuclease N1 and T1 (Interpro|IPR000026%2C (GO:0004521)) gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3855 YP_3856 YP3856 gabD2 gabD2 4381182 4382650 - similar to many succinate semialdehyde dehydrogenases%2Csuch as Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD SW:GABD_ECOLI (P25526) (482 aa)%3B and togi|16263470|ref|NP_436263.1| GabD5 succinate semialdehyde dehdyrogenase [Sinorhizobium meliloti](484 aa). There is a frameshift after codon 374. The sequence has been checked and is believed to be correct. pseudogene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3856 YP_3857 YP3857 YP_3857 4382917 4384872 - putative membrane protein similar to Yersinia pestis CO92 YPO3686 and Yersinia pestis KIM y0177. Contains Fusaric acid resistance protein conserved region (Interpro|IPR006726) gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3857 YP_3858 YP3858 emrK2 emrK2 4384874 4385809 - putative HlyD family secretion protein similar to Yersinia pestis CO92 YPO3685 and Yersinia pestis KIM y0178. Contains Secretion protein HlyD (Interpro|IPR006143%2C (GO:0016020)) gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3858 YP_3859 YP3859 YP_3859 4385817 4386020 - putative membrane protein similar to Yersinia pestis CO92 YPO3684 and Yersinia pestis KIM y0179 gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3859 YP_3861 YP3861 lysR22 lysR22 4386536 4387234 + Transcriptional regulator Best Blastp hit %3D gi|16123824|ref|NP_407137.1| (NC_003143) probable lysR-family transcriptional regulatory protein [Yersinia pestis]%2C gi|22124100|ref|NP_667523.1| (NC_004088) putative transcriptional regulator LYSR-type [Yersinia pestis KIM]%2C gi|15981603|emb|CAC93152.1| (AJ414158) probable lysR-family transcriptional regulatory protein [Yersinia pestis]%2C gi|21956850|gb|AAM83774.1|AE013617_10 (AE013617) putative transcriptional regulator LYSR-type [Yersinia pestis KIM]%2C(len:303 aa)%3B. Contains LysR substrate binding domain (Interpro|IPR005119) gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3861 YP_3862 YP3862 lysR23 lysR23 4387486 4388361 + putative lysR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3682 and Yersinia pestis KIM y0181. Contains Bacterial regulatory protein LysR%2C HTH motif (Interpro|IPR000847%2C (GO:0006355)) gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3862 YP_3864 YP3864 tcaA1 tcaA1 4388774 4391104 + putative insecticial toxin similar to Yersinia pestis CO92 YPO3681 and Yersinia pestis KIM tcaA1. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3864 YP_3865 YP3865 tcbA tcbA 4391145 4394738 + putative toxin subunit similar to Yersinia pestis KIM tcbA. Contains Phosphopantetheine attachment site (Interpro|IPR006162) gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3865 YP_3866 YP3866 tcaC1 tcaC1 4394795 4399285 + insecticidal toxin complex similar to Yersinia pestis CO92 YPO3678 and Yersinia pestis KIM tcaC1 (residues 1 to 1496 of 1496 are similar to residues 21 to 1516 of 1516 from Yersinia pestis KIM tcaC1). Contains Regulator of chromosome condensation%2C RCC1 (Interpro|IPR000408). Contains Salmonella virulence plasmid 65kDa B protein (Interpro|IPR003284) gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3866 YP_3867 YP3867 YP_3867 4399419 4399721 + putative phage-related protein similar to Yersinia pestis CO92 YPO3677 and Yersinia pestis KIM y0186 gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3867 YP_3868 YP3868 YP_3868 4399725 4400135 + putative phage-related protein similar to Yersinia pestis CO92 YPO3676 and Yersinia pestis KIM y0187. gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3868 YP_3869 YP3869 YP_3869 4400123 4400491 + putative exported protein similar to Yersinia pestis CO92 YPO3675 and Yersinia pestis KIM y0188. gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3869 YP_3870 YP3870 YP_3870 4400478 4400651 + hypothetical protein similar to Yersinia pestis KIM y0189. gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3870 YP_3871 YP3871 tccC1 tccC1 4400692 4403523 + putative toxin subunit similar to Yersinia pestis KIM tccC1. Contains Tyrosine specific protein phosphatase and dual specificity protein phosphatase (Interpro|IPR000387%2C (GO:0006470)). Contains Lipocalin-related protein and Bos/Can/Equ allergen (Interpro|IPR000566%2C (GO:0006810)). Contains YD repeat (Interpro|IPR006530) gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3871 YP_3872 YP3872 tccC2 tccC2 4403548 4406406 + putative insecticidal toxin similar to Yersinia pestis CO92 YPO3673 and Yersinia pestis KIM tccC2. Contains Tyrosine specific protein phosphatase and dual specificity protein phosphatase (Interpro|IPR000387%2C (GO:0006470)). Contains Lipocalin-related protein and Bos/Can/Equ allergen (Interpro|IPR000566%2C (GO:0006810)). Contains YD repeat (Interpro|IPR006530) gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3872 YP_3873 YP3873 YP_3873 4406342 4406548 + hypothetical protein similar to Yersinia pestis KIM y0192 gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3873 YP_3874 YP3874 tldD tldD 4406609 4408054 - putative modulator of DNA gyrase similar to Yersinia pestis CO92 tldD and Yersinia pestis KIM tldD. Contains Modulator of DNA gyrase (Interpro|IPR002510) gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3874 YP_3875 YP3875 YP_3875 4408066 4408935 - putative carbon-nitrogen hydrolase similar to Yersinia pestis CO92 YPO3671 and Yersinia pestis KIM y0194. Contains Protein of unknown function UPF0012 (Interpro|IPR001110%2C (GO:0005554)). Contains Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (Interpro|IPR003010%2C (GO:0006807)%2C (GO:0016810)) gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3875 YP_3876 YP3876 YP_3876 4408932 4412855 - putative exported protein similar to Yersinia pestis CO92 YPO3670 and Yersinia pestis KIM y0195. gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3876 YP_3877 YP3877 cafA cafA 4412949 4414418 - ribonuclease G similar to Yersinia pestis CO92 cafA and Yersinia pestis KIM cafA. Contains RNA binding S1 (Interpro|IPR003029%2C (GO:0003723)). Contains Ribonuclease E and G (Interpro|IPR004659%2C (GO:0006396)) gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3877 YP_3878 YP3878 maf1 maf1 4414408 4415007 - Nucleotide-binding protein implicated in inhibition of septum formation similar to Yersinia pestis KIM y0197. Contains Maf-like protein (Interpro|IPR003697). Contains Maf-like protein (Interpro|IPR003697) gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3878 YP_3879 YP3879 mreD mreD 4415015 4415503 - rod shape-determining protein MreD similar to Yersinia pestis CO92 mreD and Yersinia pestis KIM mreD. gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3879 YP_3880 YP3880 mreC mreC 4415500 4416495 - rod shape-determining protein MreC similar to Yersinia pestis CO92 mreC and Yersinia pestis KIM mreC. Contains Rod shape-determining protein MreC (Interpro|IPR005223) gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3880 YP_3881 YP3881 mreB mreB 4416699 4417742 - rod shape-determining protein MreB similar to Yersinia pestis CO92 mreB and Yersinia pestis KIM mreB. Contains Heat shock protein Hsp70 (Interpro|IPR001023). Contains Cell shape determining protein MreB/Mrl (Interpro|IPR004753) gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3881 YP_3882 YP3882 rtn6 rtn6 4418079 4419995 - putative exported protein similar to Yersinia pestis CO92 YPO3664 and Yersinia pestis KIM y0203. Contains GGDEF (Interpro|IPR000160%2C (GO:0005554)). Contains EAL domain (Interpro|IPR001633%2C (GO:0005554)) gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3882 YP_3883 YP3883 qor3 qor3 4420396 4421373 + putative zinc-binding dehydrogenase similar to Yersinia pestis CO92 YPO3663 and Yersinia pestis KIM y0204. Contains Zinc-containing alcohol dehydrogenase superfamily (Interpro|IPR002085%2C (GO:0008270)) gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3883 YP_3884 YP3884 YP_3884 4421530 4422696 + putative enzymes%2C related to nitrate reductase similar to Yersinia pestis CO92 YPO3662 and Yersinia pestis KIM y0205. Contains Eukaryotic molybdopterin oxidoreductase (Interpro|IPR000572%2C (GO:0006118)). Contains Twin-arginine translocation pathway signal (Interpro|IPR006311) gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3884 YP_3885 YP3885 YP_3885 4422696 4423316 + putative membrane protein similar to Yersinia pestis CO92 YPO3661 and Yersinia pestis KIM y0206 gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3885 YP_3886 YP3886 aroQ aroQ 4423579 4424031 + putative class II dehydroquinase similar to Yersinia pestis CO92 aroQ and Yersinia pestis KIM y0207. Contains Dehydroquinase%2C class II (Interpro|IPR001874%2C (GO:0009073)) gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3886 YP_3887 YP3887 accB accB 4424144 4424653 + biotin carboxyl carrier protein of acetyl-CoA carboxylase similar to Yersinia pestis CO92 accB and Yersinia pestis KIM accB. Contains Biotin/lipoyl attachment (Interpro|IPR000089). Contains Acetyl-CoA biotin carboxyl carrier (Interpro|IPR001249%2C (GO:0009317)). Contains Biotin-requiring enzyme%2C attachment site (Interpro|IPR001882%2C (GO:0009374)) gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3887 YP_3888 YP3888 accC2 accC2 4424665 4426014 + biotin carboxylase similar to Yersinia pestis CO92 accC and Yersinia pestis KIM accC. Contains Acetyl-CoA carboxylase%2C biotin carboxylase (Interpro|IPR004549%2C (GO:0016874)). Contains Carbamoyl-phosphate synthase L chain%2C ATP-binding (Interpro|IPR005479%2C (GO:0005524)). Contains Carbamoyl-phosphate synthetase large chain%2C N-terminal (Interpro|IPR005481%2C (GO:0008152)%2C (GO:0016874)). Contains Biotin carboxylase%2C C-terminal (Interpro|IPR005482%2C (GO:0016874)). Contains Carbamoyl-phosphate synthetase large chain (Interpro|IPR005483%2C (GO:0004086)) gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3888 YP_3889 YP3889 proP33 proP33 4427124 4427366 + putative membrane protein similar to Yersinia pestis CO92 YPO3657a and Yersinia pestis KIM y0210 gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3889 YP_3890 YP3890 panF panF 4427350 4428810 + sodium/pantothenate symporter similar to Yersinia pestis KIM panF. Contains Na+/solute symporter (Interpro|IPR001734%2C (GO:0016020)) gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3890 YP_3891 YP3891 prmA prmA 4428847 4429767 + ribosomal protein L11 methyltransferase similar to Yersinia pestis CO92 prmA and Yersinia pestis KIM prmA. Contains SAM (and some other nucleotide) binding motif (Interpro|IPR000051%2C (GO:0008757)). Contains Ribosomal protein L11 methyltransferase (Interpro|IPR004498%2C (GO:0006479)%2C (GO:0008276)) gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3891 YP_3892 YP3892 YP_3892 4430254 4431321 + putative TIM-barrel enzymes similar to Yersinia pestis CO92 YPO3655 and Yersinia pestis KIM y0213. Contains Protein of unknown function UPF0034 (Interpro|IPR001269%2C (GO:0005554)). Contains FMN/related compound-binding core (Interpro|IPR003009). Contains Putative TIM-barrel protein nifR3 family (Interpro|IPR004652%2C (GO:0005554))%3B possibly dehydrogenases%2C nifR3 family gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3892 YP_3893 YP3893 fiS fiS 4431346 4431642 + DNA-binding protein Fis similar to Yersinia pestis CO92 fiS and Yersinia pestis KIM fis. Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)). Contains DNA-binding protein Fis (Interpro|IPR005412%2C (GO:0006355)) gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3893 YP_3894 YP3894 YP_3894 4432046 4432165 - putative colicin immunity protein similar to Yersinia pestis CO92 YPO3653 gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3894 YP_3895 YP3895 YP_3895 4432396 4432872 - hypothetical protein similar to Yersinia pestis CO92 YPO3652 and Yersinia pestis KIM y0215 gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3895 YP_3896 YP3896 gntR gntR 4432938 4433663 - putative GntR-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3651 and Yersinia pestis KIM y0216. Contains Bacterial regulatory proteins%2C AsnC family (Interpro|IPR000485%2C (GO:0006355)). Contains Bacterial regulatory protein%2C GntR family (Interpro|IPR000524%2C (GO:0006355)) gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3896 YP_3897 YP3897 proP34 proP34 4433690 4435054 - putative metabolite transport protein similar to Yersinia pestis CO92 YPO3650 and Yersinia pestis KIM y0217. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains General substrate transporter (Interpro|IPR005828%2C (GO:0016020)). Contains Sugar transporter superfamily (Interpro|IPR005829%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3897 YP_3898 YP3898 YP_3898 4435208 4435645 - putative gamma carboxymuconolactone decarboxylase similar to Yersinia pestis CO92 YPO3649 and Yersinia pestis KIM y0218. Contains Carboxymuconolactone decarboxylase (Interpro|IPR003779%2C (GO:0006725)) gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3898 YP_3899 YP3899 mmsB mmsB 4435781 4436671 - putative 2-hydroxy-3-oxopropionate reductase similar to Yersinia pestis CO92 YPO3648 and Yersinia pestis KIM y0219. Contains 3-hydroxyisobutyrate dehydrogenase (Interpro|IPR002204%2C (GO:0006573)%2C (GO:0008442)). Contains 6-phosphogluconate dehydrogenase%2C NAD binding domain (Interpro|IPR006115%2C (GO:0006098)). Contains 6-phosphogluconate dehydrogenase (Interpro|IPR006183%2C (GO:0006098)) gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3899 YP_3900 YP3900 gloB5 gloB5 4436736 4437563 - Zn-dependent hydrolases%2C including glyoxylases similar to Yersinia pestis CO92 YPO3647 and Yersinia pestis KIM y0220. Contains Beta-lactamase-like (Interpro|IPR001279) gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3900 YP_3901 YP3901 pcp2 pcp2 4438018 4438491 + outer membrane lipoprotein similar to Yersinia pestis CO92 pcp and Yersinia pestis KIM slyB. Contains Pyrrolidone-carboxylate/pyroglutamyl peptidase I (C15) (Interpro|IPR000816%2C (GO:0006508)) gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3901 YP_3903 YP3903 cspa1 cspa1 4439024 4439236 + major cold shock protein Cspa1 similar to Yersinia pestis CO92 cspa1. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3903 YP_3904 YP3904 cspI cspI 4439421 4439708 + cold shock-like protein similar to Yersinia pestis KIM cspI. Contains Cold-shock DNA-binding domain (Interpro|IPR002059%2C (GO:0006355)) gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3904 YP_3905 YP3905 tnp_44 tnp_44 4439891 4440400 - transposase for the IS1541 insertion element similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM tnpA. Contains Transposase%2C mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3905 YP_3906 YP3906 smc3 smc3 4440754 4441929 + Chromosome segregation ATPases similar to Yersinia pestis CO92 YPO3641 and Yersinia pestis KIM y0227 gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3906 YP_3907 YP3907 YP_3907 4442036 4443382 - putative exported protein similar to Yersinia pestis CO92 YPO3640 and Yersinia pestis KIM y0228. Contains Haem peroxidase (Interpro|IPR002016%2C (GO:0006804)) gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3907 YP_3908 YP3908 gst3 gst3 4443633 4444487 + putative glutathione S-transferase similar to Yersinia pestis CO92 YPO3639 and Yersinia pestis KIM y0229. Contains Glutathione S-transferase%2C N-terminal (Interpro|IPR004045). Contains Glutathione S-transferase%2C C-terminal (Interpro|IPR004046) gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3908 YP_3909 YP3909 gutQ2 gutQ2 4444677 4445282 - putative phosphosugar isomerase/binding protein similar to Yersinia pestis CO92 YPO3638 and Yersinia pestis KIM y0230. Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)) gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3909 YP_3910 YP3910 araB2 araB2 4445279 4446931 - putative carbohydrate kinase similar to Yersinia pestis CO92 YPO3637 and Yersinia pestis KIM y0231. Contains Carbohydrate kinase%2C FGGY (Interpro|IPR000577%2C (GO:0005975)). Contains Basic helix-loop-helix dimerization domain bHLH (Interpro|IPR001092). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Pentulose kinase (Interpro|IPR006003) gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3910 YP_3911 YP3911 araH16 araH16 4446935 4447888 - putative ABC transporter%2C permease protein similar to Yersinia pestis CO92 YPO3636 and Yersinia pestis KIM y0232. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3911 YP_3912 YP3912 araH17 araH17 4447890 4448879 - putative branched-chain amino acid transport system%2C permease component similar to Yersinia pestis CO92 YPO3635 and Yersinia pestis KIM y0233. Contains Bacterial inner-membrane translocator (Interpro|IPR001851%2C (GO:0016020)) gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3912 YP_3913 YP3913 mglA10 mglA10 4448872 4450368 - ABC transporter ATP binding protein similar to Yersinia pestis CO92 YPO3634 and Yersinia pestis KIM y0234. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3913 YP_3914 YP3914 rbsB13 rbsB13 4450572 4451630 - putative periplasmic binding protein similar to Yersinia pestis CO92 YPO3633 and Yersinia pestis KIM y0235. Contains Periplasmic binding protein/LacI transcriptional regulator (Interpro|IPR001761) gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3914 YP_3915 YP3915 ddg ddg 4452274 4453275 + putative membrane protein similar to Yersinia pestis CO92 YPO3632 and Yersinia pestis KIM ddg. Contains Bacterial lipid A biosynthesis acyltransferase (Interpro|IPR004960%2C (GO:0016021)) gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3915 YP_3916 YP3916 YP_3916 4453319 4454614 + hypothetical protein similar to Yersinia pestis KIM y0237. Contains TonB-dependent receptor protein (Interpro|IPR000531%2C (GO:0016020)) gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3916 YP_3917 YP3917 nhaP nhaP 4454832 4456502 - putative Na(+)/H(+) exchanger protein similar to Yersinia pestis CO92 YPO3630 and Yersinia pestis KIM y0238. Contains Glutamate 5-kinase (Interpro|IPR001057%2C (GO:0006561)). Contains Bacterial Na+/H+ antiporter (Interpro|IPR004705). Contains Sodium/hydrogen exchanger (Interpro|IPR006153%2C (GO:0006885)%2C (GO:0016021)) gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3917 YP_3918 YP3918 YP_3918 4456830 4458185 - putative xanthine/uracil permease similar to Yersinia pestis CO92 YPO3629 and Yersinia pestis KIM y0239. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Xanthine/uracil/vitamin C permease family (Interpro|IPR006043%2C (GO:0016020)) gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3918 YP_3919 YP3919 relB relB 4458639 4458842 + putative DNA-damage-inducible protein similar to Yersinia pestis CO92 YPO3628 and Yersinia pestis KIM y0240 gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3919 YP_3920 YP3920 ssuB ssuB 4459461 4460276 - putative aliphatic sulfonates transport ATP-binding protein similar to Yersinia pestis CO92 ssuB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains GTP1/OBG family (Interpro|IPR006073) gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3920 YP_3921 YP3921 ssuC ssuC 4460273 4461070 - putative aliphatic sulfonates transport permease protein similar to Yersinia pestis CO92 ssuC and Yersinia pestis KIM ssuC. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Arginase (Interpro|IPR005924%2C (GO:0006527)) gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3921 YP_3922 YP3922 ssuD ssuD 4461079 4462227 - alkanesulfonate monooxygenase similar to Yersinia pestis CO92 ssuD and Yersinia pestis KIM y0244. Contains Bacterial luciferase (Interpro|IPR002103) gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3922 YP_3923 YP3923 YP_3923 4462246 4463368 - similar to Yersinia pestis CO92 ssuA and Yersinia pestis KIM ssuA. Note there is a frameshift following codon 111. The sequence has been checked and is believed to be correct. pseudogene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3923 YP_3924 YP3924 ssuE ssuE 4463383 4463964 - putative NAD(P)H-dependent FMN reductase similar to Yersinia pestis CO92 ssuE and Yersinia pestis KIM y0246. Contains NADPH-dependent FMN reductase (Interpro|IPR005025) gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3924 YP_3925 YP3925 deoC3 deoC3 4464435 4465136 + putative deoxyribose-phosphate aldolase similar to Yersinia pestis CO92 YPO3622 and Yersinia pestis KIM y0247. Contains Deoxyribose-phosphate aldolase (Interpro|IPR002915%2C (GO:0016228)) gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3925 YP_3926 YP3926 rbsK5 rbsK5 4465290 4466222 + putative carbohydrate kinase similar to Yersinia pestis CO92 YPO3621 and Yersinia pestis KIM y0248. Contains Ribokinase (Interpro|IPR002139%2C (GO:0006014)). Contains Carbohydrate kinase%2C PfkB (Interpro|IPR002173). Contains Zinc-containing alcohol dehydrogenase (Interpro|IPR002328%2C (GO:0008270)) gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3926 YP_3927 YP3927 rbsD2 rbsD2 4466228 4466731 + putative carbohydrate transport protein similar to Yersinia pestis CO92 YPO3620 and Yersinia pestis KIM y0249 gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3927 YP_3928 YP3928 araC8 araC8 4466893 4467834 - putative araC-family transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3619 and Yersinia pestis KIM y0250. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)) gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3928 YP_3929 YP3929 mviM6 mviM6 4468029 4469159 + putative oxidoreductase similar to Yersinia pestis CO92 YPO3618 and Yersinia pestis KIM y0251. Contains Oxidoreductase%2C N-terminal (Interpro|IPR000683%2C (GO:0008152)%2C (GO:0016491)) gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3929 YP_3930 YP3930 YP_3930 4469156 4470055 + hypothetical protein similar to Yersinia pestis CO92 YPO3617 and Yersinia pestis KIM y0252 gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3930 YP_3931 YP3931 YP_3931 4470457 4471665 + transposase for the IS285 insertion element similar to Yersinia pestis CO92 YPO3875 and Yersinia pestis KIM y2675. Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3931 YP_3932 YP3932 YP_3932 4471725 4472519 - hypothetical protein similar to Yersinia pestis CO92 YPO3616 and Yersinia pestis KIM y0254 gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3932 YP_3933 YP3933 rhsA3 rhsA3 4472528 4477069 - putative membrane protein similar to Yersinia pestis CO92 YPO3615 and Yersinia pestis KIM y0255. Contains YD repeat (Interpro|IPR006530) gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3933 YP_3934 YP3934 YP_3934 4477108 4477530 - hypothetical protein similar to Yersinia pestis CO92 YPO3614 and Yersinia pestis KIM y0256 gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3934 YP_3935 YP3935 vgrG6 vgrG6 4477533 4479731 - putative Rhs accessory genetic element similar to Yersinia pestis CO92 YPO3613 and Yersinia pestis KIM y0257. Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Rhs element Vgr protein (Interpro|IPR006533) gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3935 YP_3936 YP3936 YP_3936 4479753 4479929 - hypothetical protein similar to Yersinia pestis KIM y0259 gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3936 YP_3937 YP3937 hipB6 hipB6 4480011 4480499 + putative transcriptional regulatory protein similar to Yersinia pestis CO92 YPO3612 and Yersinia pestis KIM y0260. Contains Helix-turn-helix motif (Interpro|IPR001387%2C (GO:0003677)) gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3937 YP_3938 YP3938 YP_3938 4480581 4480805 + hypothetical protein similar to Yersinia pestis KIM y0261 gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3938 YP_3939 YP3939 YP_3939 4480881 4481072 + hypothetical protein similar to Yersinia pestis CO92 YPO3611 and Yersinia pestis KIM y0263 gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3939 YP_3940 YP3940 YP_3940 4481122 4481607 - hypothetical protein similar to Yersinia pestis CO92 YPO3610 and Yersinia pestis KIM y0264 gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3940 YP_3941 YP3941 rhsA4 rhsA4 4481609 4482979 - Rhs family protein similar to Yersinia pestis CO92 YPO3609 and Yersinia pestis KIM y0265. Contains RHS protein (Interpro|IPR001826) gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3941 YP_3942 YP3942 rhsA5 rhsA5 4483007 4485898 - putative exported protein similar to Yersinia pestis CO92 YPO3608 and Yersinia pestis KIM y0266. Contains YD repeat (Interpro|IPR006530) gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3942 YP_3943 YP3943 YP_3943 4485864 4486322 - hypothetical protein similar to Yersinia pestis CO92 YPO3607 and Yersinia pestis KIM y0267 gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3943 YP_3944 YP3944 vgrG7 vgrG7 4486328 4488730 - putative Rhs accessory genetic element similar to Yersinia pestis CO92 YPO3606 and Yersinia pestis KIM y0268. Contains ATPase%2C E1-E2 type (Interpro|IPR001757%2C (GO:0016020)). Contains Rhs element Vgr protein (Interpro|IPR006533) gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3944 YP_3945 YP3945 YP_3945 4488752 4489285 - hypothetical protein similar to Yersinia pestis CO92 YPO3605 gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3945 YP_3946 YP3946 YP_3946 4489282 4490064 - hypothetical protein similar to Yersinia pestis CO92 YPO3604 gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3946 YP_3947 YP3947 icmF4 icmF4 4490189 4493722 - putative exported protein similar to Yersinia pestis CO92 YPO3603. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)) gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3947 YP_3948 YP3948 YP_3948 4493754 4495160 - hypothetical protein similar to Yersinia pestis CO92 YPO3602 and Yersinia pestis KIM y0272. gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3948 YP_3949 YP3949 YP_3949 4495148 4495843 - hypothetical protein similar to Yersinia pestis CO92 YPO3601 and Yersinia pestis KIM y0273. gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3949 YP_3950 YP3950 YP_3950 4495831 4496628 - hypothetical protein similar to Yersinia pestis CO92 YPO3600 and Yersinia pestis KIM y0274. Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C (GO:0006355)) gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3950 YP_3951 YP3951 clpB4 clpB4 4496625 4499228 - Clp ATPase similar to Yersinia pestis CO92 clpB2 and Yersinia pestis KIM clpB. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Clp%2C N terminal (Interpro|IPR004176%2C (GO:0005524)). Contains GTP1/OBG family (Interpro|IPR006073). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains AAA ATPase%2C central region (Interpro|IPR003959%2C (GO:0005524)). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3951 YP_3952 YP3952 YP_3952 4499239 4500006 - putative membrane protein similar to Yersinia pestis CO92 YPO3598 and Yersinia pestis KIM y0276 gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3952 YP_3953 YP3953 YP_3953 4500006 4501352 - hypothetical protein similar to Yersinia pestis CO92 YPO3597 gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3953 YP_3954 YP3954 YP_3954 4501355 4501900 - putative lipoprotein similar to Yersinia pestis CO92 YPO3596 and Yersinia pestis KIM y0278 gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3954 YP_3955 YP3955 YP_3955 4501900 4503216 - FHA-domain-containing protein similar to Yersinia pestis CO92 YPO3595 and Yersinia pestis KIM y0279 gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3955 YP_3956 YP3956 YP_3956 4503342 4504439 - hypothetical protein similar to Yersinia pestis KIM y0280 gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3956 YP_3957 YP3957 YP_3957 4504394 4505131 - similar to N-terminal of Vibrio cholerae hypothetical protein Vca0110 TR:Q9KN55 (EMBL:AE004353) (589 aa) and to Escherichia coli O157:H7 Z0260 hypothetical protein TR:AAG54529 (EMBL:AE005198) (616 aa). This CDS has been disrupted by IS1661 element and seems to lose the C-terminal residues. pseudogene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3957 YP_3958 YP3958 YP_3958 4505167 4505703 + insertion element IS1661 DNA-binding protein similar to Yersinia pestis CO92 YPO0996 and Yersinia pestis KIM y3440 gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3958 YP_3959 YP3959 tra5H tra5H 4505757 4506542 + transposase for insertion sequence IS1661 similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3959 YP_3960 YP3960 mdfA mdfA 4507015 4508244 + multidrug translocase similar to Yersinia pestis CO92 mdfA and Yersinia pestis KIM cmr. Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Major facilitator superfamily (MFS) (Interpro|IPR007114) gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3960 YP_3961 YP3961 YP_3961 4508690 4508875 + hypothetical protein no significant database match found gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3961 YP_3962 YP3962 araH18 araH18 4508948 4509535 + putative membrane protein similar to Yersinia pestis CO92 YPO4049 and Yersinia pestis KIM y4069. gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3962 YP_3963 YP3963 YP_3963 4509549 4509881 - putative membrane protein similar to Yersinia pestis CO92 YPO4050 and Yersinia pestis KIM y4070. gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3963 YP_3964 YP3964 tnpA_4 tnpA_4 4510170 4510634 + similar to Yersinia pestis CO92 tnpA and Yersinia pestis KIM y4071. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)). Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) pseudogene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3964 YP_3966 YP3966 selA selA 4512591 4513985 - L-seryl-tRNA selenium transferase similar to Yersinia pestis CO92 selA and Yersinia pestis KIM selA. Contains L-seryl-tRNA selenium transferase (Interpro|IPR004534%2C (GO:0001514)%2C (GO:0005737)) gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3966 YP_3967 YP3967 fdhE fdhE 4514163 4515092 - putative formate dehydrogenase formation protein similar to Yersinia pestis CO92 fdhE and Yersinia pestis KIM fdhE. Contains Formate dehydrogenase accessory protein (Interpro|IPR006452) gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3967 YP_3968 YP3968 fdoI fdoI 4515092 4515766 - formate dehydrogenase%2C cytochrome b556 protein similar to Yersinia pestis CO92 fdoI and Yersinia pestis KIM fdoI. Contains Nickel-dependent hydrogenase b-type cytochrome subunit (Interpro|IPR000516%2C (GO:0016020)%2C (GO:0016491)). Contains Formate dehydrogenase%2C gamma subunit (Interpro|IPR006471) gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3968 YP_3969 YP3969 fdoH fdoH 4515763 4516734 - formate dehydrogenase-O%2C iron-sulfur subunit similar to Yersinia pestis CO92 fdoH and Yersinia pestis KIM fdoH. Contains 7Fe ferredoxin (Interpro|IPR000813%2C (GO:0006118)%2C (GO:0009497)). Contains 4Fe-4S ferredoxin%2C iron-sulfur binding domain (Interpro|IPR001450%2C (GO:0006118)%2C (GO:0009497)). Contains Formate dehydrogenase%2C beta subunit (Interpro|IPR006470) gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3969 YP_3970 YP3970 fdoG fdoG 4516747 4519815 - similar to gi|16762396|ref|NP_458013.1| (NC_003198) formate dehydrogenase-O%2C major subunit [Salmonella enterica subsp. enterica serovar Typhi](len:1016 aa). There is a opal nonsense mutation at codon 196. pseudogene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3970 YP_3971 YP3971 fdhD fdhD 4519958 4520815 + putative formate dehydrogenase similar to Yersinia pestis CO92 fdhD and Yersinia pestis KIM fdhD. Contains Formate dehydrogenase%2C subunit FdhD (Interpro|IPR003786%2C (GO:0006118)%2C (GO:0009326)) gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3971 YP_3972 YP3972 sodA sodA 4521251 4521874 + superoxide dismutase (Mn) similar to Yersinia pestis CO92 sodA and Yersinia pestis KIM sodA. Contains Manganese and iron superoxide dismutase (Interpro|IPR001189%2C (GO:0006801)) gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3972 YP_3973 YP3973 tar3 tar3 4522218 4524167 + methyl-accepting chemotaxis protein II similar to Yersinia pestis CO92 tar and Yersinia pestis KIM tsr. Contains Histidine kinase%2C HAMP region (Interpro|IPR003660%2C (GO:0016020)). Contains Bacterial chemotaxis sensory transducer (Interpro|IPR004089%2C (GO:0016020)). Contains Methyl-accepting chemotaxis protein (Interpro|IPR004090%2C (GO:0016020)) gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3973 YP_3974 YP3974 YP_3974 4524357 4524689 + putative membrane protein similar to Yersinia pestis CO92 YPO4063 and Yersinia pestis KIM y4082 gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3974 YP_3975 YP3975 YP_3975 4525221 4525697 + hypothetical protein similar to Yersinia pestis KIM y4083 gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3975 YP_3976 YP3976 YP_3976 4525866 4526114 - hypothetical protein Best Blastp hit %3D gi|16124179|ref|NP_407492.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]%2C gi|22127953|ref|NP_671376.1| (NC_004088) hypothetical protein [Yersinia pestis KIM]%2C gi|15981960|emb|CAC93519.1| (AJ414160) conserved hypothetical protein [Yersinia pestis]%2C gi|21961096|gb|AAM87627.1|AE014010_3 (AE014010) hypothetical protein [Yersinia pestis KIM]%2C(len:118 aa) gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3976 YP_3977 YP3977 mtlR mtlR 4526471 4527025 - mannitol operon repressor similar to Yersinia pestis CO92 mtlR and Yersinia pestis KIM mtlR gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3977 YP_3978 YP3978 mtlD2 mtlD2 4527232 4528395 - mannitol-1-phosphate 5-dehydrogenase similar to Yersinia pestis CO92 mtlD and Yersinia pestis KIM mtlD. Contains Mannitol dehydrogenase (Interpro|IPR000669%2C (GO:0008152)) gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3978 YP_3979 YP3979 mtlA mtlA 4528532 4530463 - PTS system%2C mannitol-specific IIABC component similar to Yersinia pestis CO92 mtlA and Yersinia pestis KIM mtlA. Contains Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 (Interpro|IPR002178%2C (GO:0009401)). Contains Phosphotransferase system%2C EIIC (Interpro|IPR003352%2C (GO:0016020)). Contains Phosphotransferase system%2C lactose/cellobiose-specific IIB subunit (Interpro|IPR003501%2C (GO:0009401)). Contains PTS system mannitol-specific enzyme IIC (Interpro|IPR004718%2C (GO:0016021)) gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3979 YP_3980 YP3980 YP_3980 4531113 4531838 - putative exported protein similar to Yersinia pestis CO92 YPO4070 and Yersinia pestis KIM y4088. gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3980 YP_3981 YP3981 glyS glyS 4532305 4534374 - glycyl-tRNA synthetase beta subunit similar to Yersinia pestis CO92 glyS and Yersinia pestis KIM glyS. Contains Glycyl-tRNA synthetase%2C beta subunit (Interpro|IPR002311%2C (GO:0006426)). Contains Heterodimeric glycyl-transfer RNA synthetase (Interpro|IPR006194%2C (GO:0006426)) gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3981 YP_3982 YP3982 glyQ glyQ 4534384 4535298 - glycyl-tRNA synthetase alpha subunit similar to Yersinia pestis CO92 glyQ and Yersinia pestis KIM glyQ. Contains Glycyl-tRNA synthetase%2C alpha subunit (Interpro|IPR002310%2C (GO:0006426)). Contains Heterodimeric glycyl-transfer RNA synthetase (Interpro|IPR006194%2C (GO:0006426)) gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3982 YP_3983 YP3983 YP_3983 4535387 4535563 + hypothetical protein no significant database match found gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3983 YP_3984 YP3984 tag tag 4535626 4536198 + DNA-3-methyladenine glycosylase similar to Yersinia pestis CO92 tag. Contains DNA-3-methyladenine glycosylase I (Interpro|IPR004597%2C (GO:0006281)%2C (GO:0008725)). Contains Methyladenine glycosylase (Interpro|IPR005019%2C (GO:0006281)%2C (GO:0008725)) gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3984 YP_3985 YP3985 wecD4 wecD4 4536195 4536650 + putative acetyltransferase similar to Yersinia pestis CO92 YPO4075 and Yersinia pestis KIM y4092. Contains GCN5-related N-acetyltransferase (Interpro|IPR000182%2C (GO:0008080)) gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3985 YP_3986 YP3986 ompA6 ompA6 4537008 4537667 + putative lipoprotein similar to Yersinia pestis CO92 YPO4076 and Yersinia pestis KIM y4093. Contains DNA gyrase%2C subunit B (Interpro|IPR000565%2C (GO:0006265)). Contains MotY protein (Interpro|IPR001035%2C (GO:0001539)%2C (GO:0009288)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Bacterial outer membrane protein (Interpro|IPR006664). Contains OmpA/MotB domain (Interpro|IPR006665) gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3986 YP_3987 YP3987 YP_3987 4537798 4538442 - putative transcriptional regulator similar to Yersinia pestis CO92 YPO4077 and Yersinia pestis KIM y4095 gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3987 YP_3988 YP3988 ldhA3 ldhA3 4538925 4539941 + putative D-isomer specific 2-hydroxyaciddehydrogenase similar to Yersinia pestis CO92 YPO4078 and Yersinia pestis KIM y4096. Contains TrkA potassium uptake protein (Interpro|IPR006036%2C (GO:0006813)%2C (GO:0008324)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain (Interpro|IPR006139%2C (GO:0006564)%2C (GO:0016616)). Contains D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain (Interpro|IPR006140%2C (GO:0006564)%2C (GO:0016616)) gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3988 YP_3989 YP3989 malS malS 4540211 4542274 + alpha-amylase protein similar to Yersinia pestis CO92 malS and Yersinia pestis KIM malS. Contains Alpha amylase%2C catalytic domain (Interpro|IPR006047%2C (GO:0005975)). Contains Alpha amylase%2C catalytic subdomain (Interpro|IPR006589%2C (GO:0005975)) gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3989 YP_3990 YP3990 YP_3990 4542689 4543132 + putative membrane protein similar to Yersinia pestis CO92 YPO4081 and Yersinia pestis KIM y4098. Contains Polycystic kidney disease type 2 protein (Interpro|IPR003915%2C (GO:0016020)) gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3990 YP_3991 YP3991 avtA3 avtA3 4543482 4544852 + alanine-alpha-ketoisovalerate similar to Yersinia pestis KIM avtA gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3991 YP_3992 YP3992 YP_3992 4544965 4546623 - putative membrane protein similar to Yersinia pestis CO92 YPO4083 and Yersinia pestis KIM y4100. Contains TrkA-C (Interpro|IPR006037%2C (GO:0006813)%2C (GO:0008324)). Contains YidE/YbjL duplication (Interpro|IPR006512) gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3992 YP_3993 YP3993 ibpB ibpB 4546996 4547502 - heat shock protein similar to Yersinia pestis CO92 ibpB and Yersinia pestis KIM ibpB. Contains Heat shock protein Hsp20 (Interpro|IPR002068) gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3993 YP_3994 YP3994 ibpA ibpA 4547741 4548154 - heat shock protein similar to Yersinia pestis CO92 ibpA and Yersinia pestis KIM ibpA. Contains Heat shock protein Hsp20 (Interpro|IPR002068) gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3994 YP_3995 YP3995 YP_3995 4548522 4548860 + putative lipoprotein similar to Yersinia pestis CO92 YPO4086 and Yersinia pestis KIM y4103 gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3995 YP_3996 YP3996 YP_3996 4548900 4549515 - C-terminal of this CDS is similar toC-treminal of gi|16767096|ref|NP_462711.1| (NC_003197) putative cytoplasmic protein [Salmonella typhimurium LT2](len:408 aa)%3B N--terminal of this CDS is similar to N-treminal of gi|16767096 |ref|NP_462711.1| (NC_003197) putative cytoplasmic protein [Salmonella typhimurium LT2](len:408 aa).There might have been frameshift and deletionoccur after codon 81. The sequence has been checked and is believed to be correct. pseudogene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3996 YP_3997 YP3997 tdcB tdcB 4549696 4550685 + pyridoxal-phosphate dependent enzyme similar to Yersinia pestis CO92 YPO4089 and Yersinia pestis KIM tdcB. Contains Serine/threonine dehydratase%2C pyridoxal-phosphate attachment site (Interpro|IPR000634%2C (GO:0006520)). Contains Pyridoxal-5'-phosphate-dependent enzyme%2C beta family (Interpro|IPR001926%2C (GO:0006520)%2C (GO:0016829)) gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3997 YP_3998 YP3998 YP_3998 4550679 4551632 + putative ornithine cyclodeaminase similar to Yersinia pestis CO92 YPO4090 and Yersinia pestis KIM y4106. Contains Ornithine cyclodeaminase/mu-crystallin (Interpro|IPR003462) gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3998 YP_3999 YP3999 YP_3999 4551850 4552386 + DNA-bding protein of IS 1661 similar to insertion element 1661 DNA-binding protein and N-terminal 178 residues of Yersinia pestis KIM y4107 gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=YP_3999 YP_4000 YP4000 tra5I tra5I 4552440 4553225 + transposase for insertion sequence IS1661 similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C (GO:0006310)) gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4000 YP_4001 YP4001 cof4 cof4 4553616 4554506 - putative haloacid dehalogenase-like hydrolase similar to Yersinia pestis CO92 YPO4093 and Yersinia pestis KIM y4109. Contains Cof protein (Interpro|IPR000150%2C (GO:0005554)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IIB (Interpro|IPR006379) gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4001 YP_4002 YP4002 gyrB2 gyrB2 4554641 4557058 - DNA gyrase subunit B similar to Yersinia pestis CO92 gyrB and Yersinia pestis KIM gyrB. Contains Topoisomerase IV%2C subunit B (Interpro|IPR000411%2C (GO:0006268)). Contains DNA gyrase%2C subunit B (Interpro|IPR000565%2C (GO:0006265)). Contains DNA topoisomerase II (Interpro|IPR001241%2C (GO:0006265)). Contains DNA gyrase%2C subunit B%2C C-terminal (Interpro|IPR002288%2C (GO:0006265)). Contains ATP-binding region%2C ATPase-like (Interpro|IPR003594%2C (GO:0005524)). Contains TOPRIM (Interpro|IPR006171%2C (GO:0006304)) gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4002 YP_4003 YP4003 recF recF 4557075 4558397 - DNA metabolism protein similar to Yersinia pestis CO92 recF and Yersinia pestis KIM recF. Contains RecF protein (Interpro|IPR001238%2C (GO:0006281)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains SMC protein%2C N terminal (Interpro|IPR003395%2C (GO:0007059)) gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4003 YP_4004 YP4004 dnaN dnaN 4558333 4559433 - DNA polymerase III%2C beta subunit protein similar to Yersinia pestis CO92 dnaN and Yersinia pestis KIM dnaN. Contains DNA polymerase III%2C beta chain (Interpro|IPR001001%2C (GO:0008408)) gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4004 YP_4005 YP4005 dnaA2 dnaA2 4559438 4560826 - chromosomal replication initiator protein similar to Yersinia pestis CO92 dnaA and similar to Yersinia pestis KIM dnaA(residues 1 to 462 of 462 are similar to residues 5 to 466 of 466 from Yersinia pestis KIM dnaA). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Kinesin%2C motor region (Interpro|IPR001752%2C (GO:0005875)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C (GO:0006275)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)) gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4005 YP_4006 YP4006 YP_4006 4560950 4561159 + hypothetical protein similar to Yersinia pestis CO92 YPO4098 gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4006 YP_4007 YP4007 rpmH rpmH 4561536 4561676 + 50S ribosomal protein L34 similar to Yersinia pestis CO92 rpmH and Yersinia pestis KIM rpmH. Contains Ribosomal protein L34 (Interpro|IPR000271%2C (GO:0006412)) gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4007 YP_4008 YP4008 rnpA rnpA 4561695 4562054 + ribonuclease P protein similar to Yersinia pestis CO92 rnpA and Yersinia pestis KIM rnpA. Contains Bacterial ribonuclease P protein (Interpro|IPR000100%2C (GO:0008033)) gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4008 YP_4009 YP4009 yidC yidC 4562278 4563918 + putative membrane protein similar to Yersinia pestis CO92 YPO4102 and Yersinia pestis KIM y4117. Contains 60 kDa inner membrane protein (Interpro|IPR001708%2C (GO:0016020)). Contains P-II protein urydylation site (Interpro|IPR002332) gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4009 YP_4010 YP4010 thdF thdF 4564061 4565425 + GTP-binding protein similar to Yersinia pestis KIM thdF. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains Ras GTPase superfamily (Interpro|IPR001806%2C (GO:0007264)). Contains GTP-binding protein%2C HSR1-related (Interpro|IPR002917). Contains tRNA modification GTPase TrmE (Interpro|IPR004520%2C (GO:0006400)). Contains Small GTP-binding protein domain (Interpro|IPR005225). Contains GTP-binding domain (Interpro|IPR005289) gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4010 YP_4011 YP4011 YP_4011 4565611 4566810 + putative paraquat-inducible protein B similar to Yersinia pestis CO92 YPO4104 and Yersinia pestis KIM y4119. gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4011 YP_4012 YP4012 YP_4012 4567278 4567553 - putative exported protein similar to Yersinia pestis CO92 YPO4105 gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4012 YP_4013 YP4013 YP_4013 4567621 4568241 - hypothetical protein similar to Yersinia pestis CO92 YPO4106 and Yersinia pestis KIM y4120 gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4013 YP_4014 YP4014 YP_4014 4568786 4570171 - putative membrane/transport protein%2C symporter similar to Yersinia pestis KIM y4121. Contains Glucose/ribitol dehydrogenase (Interpro|IPR002347%2C (GO:0008152)%2C (GO:0016491)). Contains Xanthine/uracil/vitamin C permease family (Interpro|IPR006043%2C (GO:0016020)) gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4014 YP_4015 YP4015 YP_4015 4570607 4571275 + putative haloacid dehalogenase-like hydrolase similar to Yersinia pestis CO92 YPO4108 and Yersinia pestis KIM y4122. Contains Haloacid dehalogenase/epoxide hydrolase (Interpro|IPR005833%2C (GO:0008152)%2C (GO:0016787)). Contains Haloacid dehalogenase-like hydrolase (Interpro|IPR005834%2C (GO:0008152)%2C (GO:0016787)). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 (Interpro|IPR006402). Contains HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 (Interpro|IPR006439) gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4015 YP_4016 YP4016 artM5 artM5 4571310 4572119 - putative amino acid transport system permease similar to Yersinia pestis CO92 YPO4109 and Yersinia pestis KIM y4123. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4016 YP_4017 YP4017 gltJ2 gltJ2 4572067 4572804 - ABC transporter permease similar to Yersinia pestis CO92 YPO4110 and Yersinia pestis KIM gltJ. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)) gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4017 YP_4018 YP4018 artI4 artI4 4572987 4573841 - putative periplasmic solute-binding protein similar to Yersinia pestis CO92 YPO4111 and Yersinia pestis KIM y4125. Contains Solute-binding protein/glutamate receptor (Interpro|IPR001311%2C (GO:0006810)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C (GO:0030288)) gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4018 YP_4019 YP4019 YP_4019 4574061 4574732 - putative membrane protein similar to Yersinia pestis CO92 YPO4112 and Yersinia pestis KIM y4126 gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4019 YP_4020 YP4020 phoU phoU 4575028 4575750 - negative regulator for pho regulon similar to Yersinia pestis KIM phoU. Contains PhoU (Interpro|IPR002754) gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4020 YP_4021 YP4021 pstB2 pstB2 4575838 4576617 - putative phosphate transport ATP-binding protein similar to Yersinia pestis CO92 pstB and Yersinia pestis KIM pstB. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains Phosphate transport system permease protein 1 (Interpro|IPR005670%2C (GO:0019866)) gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4021 YP_4022 YP4022 pstA2 pstA2 4576695 4577582 - putative phosphate transport system permease similar to Yersinia pestis CO92 pstA and Yersinia pestis KIM pstA. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Phosphate transport system permease protein 2 (Interpro|IPR005672%2C (GO:0019866)) gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4022 YP_4023 YP4023 pstC2 pstC2 4577584 4578546 - putative phosphate transport system permease similar to Yersinia pestis CO92 pstC and Yersinia pestis KIM pstC. Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Vacuolar H+-transporting two-sector ATPase%2C C subunit (Interpro|IPR000245%2C (GO:0016020)). Contains Binding-protein-dependent transport systems inner membrane component (Interpro|IPR000515%2C (GO:0016020)). Contains Sodium:dicarboxylate symporter (Interpro|IPR001991%2C (GO:0016020)). Contains Phosphate transport system permease protein 1 (Interpro|IPR005670%2C (GO:0019866)) gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4023 YP_4024 YP4024 pstS2 pstS2 4578760 4579800 - putative phosphate-binding periplasmic protein similar to Yersinia pestis CO92 pstS and Yersinia pestis KIM pstS. Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains Bacterial extracellular solute-binding protein%2C family 1 (Interpro|IPR006059%2C (GO:0006810)) gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4024 YP_4025 YP4025 glmS glmS 4580283 4582112 - glucosamine--fructose-6-phosphate aminotransferase similar to Yersinia pestis CO92 glmS and Yersinia pestis KIM glmS. Contains Glutamine amidotransferase%2C class-II (Interpro|IPR000583%2C (GO:0008152)%2C (GO:0016003)). Contains Sugar isomerase (SIS) (Interpro|IPR001347%2C (GO:0005975)). Contains Glucosamine-fructose-6-phosphate aminotransferase%2C isomerising (Interpro|IPR005855%2C (GO:0016051)) gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4025 YP_4026 YP4026 glmU glmU 4582313 4583689 - UDP-N-acetylglucosamine pyrophosphorylase similar to Yersinia pestis CO92 glmU and Yersinia pestis KIM glmU. Contains Bacterial transferase hexapeptide repeat (Interpro|IPR001451). Contains Nucleotidyl transferase (Interpro|IPR005835%2C (GO:0009058)%2C (GO:0016779)). Contains UDP-N-acetylglucosamine pyrophosphorylase (Interpro|IPR005882%2C (GO:0009103)) gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4026 YP_4027 YP4027 atpC atpC 4584304 4584726 - ATP synthase epsilon subunit protein similar to Yersinia pestis CO92 atpC and Yersinia pestis KIM atpC. Contains H+-transporting two-sector ATPase%2C delta/epsilon subunit (Interpro|IPR001469%2C (GO:0006818)) gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4027 YP_4028 YP4028 atpD atpD 4584748 4586130 - ATP synthase beta subunit protein similar to Yersinia pestis CO92 atpD and Yersinia pestis KIM atpD. Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C (GO:0006952)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C C-terminal (Interpro|IPR000793%2C (GO:0006818)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C (GO:0000166)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C N-terminal (Interpro|IPR004100%2C (GO:0016469)). Contains ATP synthase F1%2C beta subunit (Interpro|IPR005722%2C (GO:0016021)%2C (GO:0045255)) gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4028 YP_4029 YP4029 atpG atpG 4586286 4587149 - ATP synthase gamma subunit protein similar to Yersinia pestis CO92 atpG and Yersinia pestis KIM atpG. Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C (GO:0006355)). Contains H+-transporting two-sector ATPase%2C gamma subunit (Interpro|IPR000131%2C (GO:0016020)) gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4029 YP_4030 YP4030 atpA atpA 4587211 4588752 - ATP synthase alpha subunit protein similar to Yersinia pestis CO92 atpA and Yersinia pestis KIM atpA. Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C (GO:0006818)). Contains H+-transporting two-sector ATPase%2C alpha subunit%2C C-terminal (Interpro|IPR000790%2C (GO:0006818)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C C-terminal (Interpro|IPR000793%2C (GO:0006818)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C (GO:0005524)). Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C N-terminal (Interpro|IPR004100%2C (GO:0016469)). Contains ATP synthase F1%2C alpha subunit (Interpro|IPR005294) gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4030 YP_4031 YP4031 atpH atpH 4588767 4589300 - ATP synthase delta subunit protein similar to Yersinia pestis CO92 atpH and Yersinia pestis KIM atpH. Contains H+-transporting two-sector ATPase%2C delta (OSCP) subunit (Interpro|IPR000711%2C (GO:0006818)) gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4031 YP_4032 YP4032 atpF atpF 4589315 4589785 - ATP synthase subunit B protein similar to Yersinia pestis CO92 atpF and Yersinia pestis KIM atpF. Contains H+-transporting two-sector ATPase%2C B/B' subunit (Interpro|IPR002146%2C (GO:0006818)). Contains ATP synthase F0%2C subunit B (Interpro|IPR005864%2C (GO:0045264)) gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4032 YP_4033 YP4033 atpE atpE 4589847 4590086 - ATP synthase subunit C protein similar to Yersinia pestis CO92 atpE and Yersinia pestis KIM atpE. Contains Eubacterial/plasma membrane H+-transporting two-sector ATPase%2C C subunit (Interpro|IPR000454%2C (GO:0016020)). Contains H+-transporting two-sector ATPase%2C C subunit (Interpro|IPR002379%2C (GO:0016020)). Contains ATP synthase F0%2C C subunit (Interpro|IPR005953%2C (GO:0016021)%2C (GO:0016467)) gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4033 YP_4034 YP4034 atpB atpB 4590136 4590960 - ATP synthase subunit B protein similar to Yersinia pestis CO92 atpB and Yersinia pestis KIM atpB. Contains H+-transporting two-sector ATPase%2C A subunit (Interpro|IPR000568%2C (GO:0016020)) gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4034 YP_4035 YP4035 atpI atpI 4591000 4591449 - ATP synthase protein I similar to Yersinia pestis CO92 atpI and Yersinia pestis KIM atpI. Contains ATP synthase I chain (Interpro|IPR005598) gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4035 YP_4036 YP4036 gidB gidB 4592050 4592721 - glucose inhibited division protein B similar to Yersinia pestis CO92 gidB and Yersinia pestis KIM gidB. Contains Glucose inhibited division protein (Interpro|IPR003682%2C (GO:0007049)) gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4036 YP_4037 YP4037 gidA gidA 4592816 4594786 - glucose inhibited division protein A similar to Yersinia pestis CO92 gidA and Yersinia pestis KIM gidA. Contains Glucose-inhibited division protein%2C A family (Interpro|IPR002218). Contains Glucose-inhibited division protein A subfamily (Interpro|IPR004416%2C (GO:0005554)) gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=YP_4037 YP_56 tRNA-Thr_3 YP_56 3471054 3471129 - tRNA-Thr Cove score 94.75 tRNA gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=YP_56 YP_57 tRNA-Gly_3 YP_57 3471136 3471210 - tRNA-Gly Cove score 63.22 tRNA gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=YP_57 YP_58 tRNA-Tyr_2 YP_58 3471360 3471444 - tRNA-Tyr Cove score 66.93 tRNA gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=YP_58 YP_59 tRNA-Thr_4 YP_59 3471463 3471538 - tRNA-Thr Cove score 93.97 tRNA gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=YP_59 YP_pCD01 pCD01 tnp tnp 87 1109 + putative transposase similar to corresponding CDS from the Y. pestis CO92 (ref:NC_003131.1) and Y. pestis KIM pCD1 (EMBL:AF053946%2C AF074612) (340 aa). similar to many others%2C eg: TRA0_ECOLI (EMBL:X14793)%2C istA%2C E.coli transposase for insert sequence element IS21 (390 aa). contain pfam match to entry PF00239 recombinase%2C Site-specific recombinases. contain probable helix-turn-helix motif at aa 19-40. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD01 YP_pCD02 pCD02 YP_pCD02 1106 1888 + putative ATP-binding protein probable transposase%3B similar to corresponding CDS from Y. pestis CO92 pCD1 (ref: NC_003131.1) and Y. pestis KIM5 pCD1 (EMBL:AF053946%2C AF074612)%2C (259 aa). similar to many others e.g. ISTB_ECOLI (EMBL:X14793)%2C istB%2C E.coli transposase for insertion sequence element IS21 (265 aa). contains PS00017 ATP/GTP-biding site motif A (P-loop). Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: DNA replication origin binding (GO:0003688)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: DNA replication initiation (GO:0006270)%2C Biological Process: regulation of DNA replication (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C Mo gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD02 YP_pCD03 pCD03 YP_pCD03 1959 2357 + hypothetical protein Best Blastp hit %3Dgi|16082768|ref| NP_395214.1| (NC_003131) hypothetical protein YPCD1.82c (135 aa) [Yersinia pestis]%2C gi|5832500|emb|CAB54959.1| (AL117189) hypothetical protein YPCD1.82c (135 aa) [Yersinia pestis]%2Clacking the first 3 aa. gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD03 YP_pCD04 pCD04 YP_pCD04 2229 2633 - possible transposase Best Blastp hit %3Dgi|16082767|ref| NP_395213.1| (NC_003131) YPCD1.81%2C possible transposase remnant%2C len: 78 aa%3B and similar to some transposase protein in different species e.g. gi|18026936|gb|AAL55699.1|AF246719_3 (AF246719) hypothetical transposase from E.coli (81 aa). gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD04 YP_pCD05 pCD05 YP_pCD05 2654 3022 + endonuclease-like protein Best Blastp hit %3D pir||T42844 endonuclease homolog (122 aa)- Yersinia pestis plasmid pCD1%3B. Contains Phospholipase D/Transphosphatidylase (Interpro|IPR001736%2C Molecular Function: enzyme (GO:0003824)%2C Biological Process: metabolism (GO:0008152)) gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD05 YP_pCD06 pCD06 repB repB 3160 3414 + replication protein RepB-like protein Best Blastp hit %3Dgi|10955601|ref| NP_052445.1| (NC_002120) RepB [Yersinia enterocolitica]%2C gi| 16082766|ref|NP_395212.1| (NC_003131) putative replication transcriptional regulator [Yersinia pestis] gi|11278474|pir ||T43617 replication protein repB - Yersinia pestis plasmid pCD1%2C gi|155566|gb|AAA98436.1| (M55182) replication protein [Plasmid pYVe439-80] gi|2996277|gb|AAC62600.1| (AF053946) replication protein RepB homolog [Yersinia pestis]%2C gi|38220 40|gb|AAC69760.1| (AF074612) replication protein [Yersinia pestis] gi|4324388|gb|AAD16865.1| (AF102990) RepB [Yersinia enterocolitica]%2C gi|5832498|emb|CAB54956.1| (AL117189) putative replication transcriptional regulator [Yersinia pestis ] gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD06 YP_pCD07 pCD07 tap tap 3656 3730 + putative repA translation protein similar to corresponding CDS from Y. pestis CO92 pCD1(AL117189) and Y. pestis KIM5 pCD1 (EMBL:AF053946%2C AF074612) (24 aa). Similar to other Tap proteins e.g. TR:P72429 (EMBL:U64797)%2C tap%2C from Salmonella enteritidis virulence plasmid (25 aa) gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD07 YP_pCD08 pCD08 repA repA 3723 4589 + replication protein RepA-like protein best blastp hit %3D ref|NP_395210.1| (NC_003131) putative replication initiation protein [Yersinia pestis]%2C pir||T42847 replication protein - Yersinia pestis plasmid pCD1%2C gb|AAC69762.1| (AF074612) replication protein [Yersinia pestis]%2C emb|CAB54954.1| (AL117189) putative replication initiation protein [Yersinia pestis]%2C len %3D 288 gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD08 YP_pCD09 pCD09 YP_pCD09 5416 5634 - hypothetical protein Best Blastp hit %3D pir||T42848 hypothetical protein Y0006 - Yersinia pestis plasmid pCD1%2Cgb|AAC69763.1| (AF074612) unknown [Yersinia pestis]%2C len:72 aa gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD09 YP_pCD10 pCD10 YP_pCD10 5934 6176 + hypothetical protein gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD10 YP_pCD11 pCD11 YP_pCD11 6149 6451 + putative transposase remnant%3B Best Blastp hit %3Dgi|16082704|ref| NP_395150.1| (NC_003131) putative transposase remnant [Yersinia pestis] gi|5832436|emb|CAB54891.1| (AL117189) putative transposase remnant [Yersinia pestis] and similar to some putative transposase e.g. ref|NP_520434.1| (NC_003295) putative transposase protein from Ralstonia solanacearum%3B emb|CAD48417.1| (AJ507493) putative transposase from E.coli pseudogene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD11 YP_pCD12 pCD12 YP_pCD12 6747 7196 + hypothetial protein Best Blastp hit %3Dgi|16082761|ref|NP_395207.1| (NC_003131) hypothetical protein YPCD1.73c [Yersinia pestis]%2C gi|5832493|emb|CAB54950.1| (AL117189) hypothetical protein YPCD1.73c [Yersinia pestis] gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD12 YP_pCD13 pCD13 ypkA ypkA 7204 9402 + putative targeted effector protein kinase YpkA Best Blastp hit %3Dgi|16082760|ref| NP_395206.1| (NC_003131) putative targeted effector protein kinase [Yersinia pestis]%2C gi|5832492|emb|CAB54949.1| (AL117 189) putative targeted effector protein kinase [Yersinia pestis]%3B . Contains Protein kinase (Interpro|IPR000719%2C Molecular Function: protein kinase (GO:0004672)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: protein amino acid phosphorylation (GO:0006468)). Contains Serine/Threonine protein kinase (Interpro|IPR002290%2C Molecular Function: protein serine/threonine kinase (GO:0004674)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: protein amino acid phosphorylation (GO:0006468)). Contains Yersinia serine/threonine protein kinase (Interpro|IPR003547%2C Molecular Function: protein serine/threonine kinase (GO:0004674)%2C Biological Process: protein amino acid phosphorylation (GO:0006468)) gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD13 YP_pCD14 pCD14 yopJ yopJ 9798 10664 + putative targeted effector protein YopJ Best Blastp hit %3Dgi|16082759|ref|NP_395205.1| (NC_003131) putative targeted effector protein [Yersinia pestis] gi|5832491|emb|CAB54948.1| (AL117189) putative targeted effector protein [Yersinia pestis]%3B . Contains Peptidase family C55 (Interpro|IPR005083) gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD14 YP_pCD15 pCD15 YP_pCD15 11250 11786 - putative transposase protein Best Blastp hit %3D ref|NP_395203.1|>gi|16082757|ref| NP_395203.1| (NC_003131) YPCD1.69%2C probable transposase remnant%2C len: 193 aa%3B similar to TR:Q46612 (EMBL:X78052)%2C putative transposase ORFB from Enterobacter agglomerans IS1222 (276 aa). The N-terminus and upstream ORFA are not pr> gi|5832489|emb|CAB54946.1| (AL117189) YPCD1.69%2C probable transposase remnant%2C len: 193 aa%3B similar to TR:Q46612 (EMBL:X78052)%2C putative transposas e ORFB from Enterobacter agglomerans IS1222 (276 aa).%3B and similar to some transposase proteins e.g. ref|NP_395223.1| (NC_003131) putative transposase [Yersinia pestis]%3B . Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)) gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD15 YP_pCD16 pCD16 YP_pCD16 11858 12064 + hypothetical protein Best Blastp hit %3D gi|16082756|ref|NP_395202.1| (NC_003131) YPCD1.68c%2C Y0012%2C hypothetical protein%2C len: 68 aa%3B similar to corresponding CDS from Y.pes tis KIM5 pCD1 (EMBL:AF074612) (68 aa)%3B gi|11354275|pir||T42852 hypothetical protein Y0012 - Yersinia pestis plasmid pCD1 gi|38 22047|gb|AAC69767.1| (AF074612) unknown [Yersinia pestis]%2C gi|5832488|emb|CAB54945.1| (AL117189) YPCD1.68c%2C Y0012%2C hypo thetical protein%2C len: 68 aa%3B similar to corresponding CDS from Y. pestis KIM5 pCD1 (EMBL:AF074612) (68 aa) gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD16 YP_pCD17 pCD17 yopH yopH 12347 13753 + putative protein-tyrosine phosphatase Yop effector YopH Best Blastp hit %3D gi|16082755|ref|NP_395201.1| (NC_003131) putative protein-tyrosine phosphatase Yop effector [Yersinia pestis]%2C gi|11281978|pir||T43622 targeted effector protein YopH - Yersinia pestis plasmid pCD1 gi|2996283|gb|AAC62606.1| (AF053946) YopH [Yersinia pestis]%2C gi|3822048|gb|AAC69768.1| (AF074612) targeted effector protein [Yersinia pestis]%2C gi|5832487|emb|CAB54944.1| (AL117 189) putative protein-tyrosine phosphatase Yop effector [Yersinia pestis]%3B. Contains Tyrosine specific protein phosphatase (Interpro|IPR000242%2C Molecular Function: protein tyrosine phosphatase (GO:0004725)%2C Biological Process: protein amino acid dephosphorylation (GO:0006470)). Contains Tyrosine specific protein phosphatase and dual specificity protein phosphatase (Interpro|IPR000387%2C Molecular Function: protein phosphatase (GO:0004721)%2C Biological Process: protein amino acid dephosphorylation (GO:0006470)). Contains Salmonella/Yersinia modular tyrosine gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD17 YP_pCD18 pCD18 ORFC ORFC 14265 14573 - putative transposase Best Blastp hit %3D pir||T42854 probable transposase - Yersinia pestis plasmid pCD1%2C gb|AAC69769.1| (AF074612) putative transposase (123 aa)[Yersinia pestis]%3B ref|NP_395199.1| (NC_003131) putative transposase [Yersinia pestis] emb|CAB54942.1| (AL117189) putative transposase [Yersinia pestis] (102 aa) gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD18 YP_pCD19 pCD19 ORFB ORFB 14570 15004 - putative transposase Best Blastp hit %3Dgi|16082752|ref|NP_395198.1| (NC_003131) putative transposase ORFB [Yersini a pestis] gi|5832484|emb|CAB54941.1| (AL117189) putative transposase ORFB [Yersinia pestis] gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD19 YP_pCD20 pCD20 ORFA ORFA 15028 15294 - putative transposase ORFA Best Blastp hit %3Dgi|16082751|ref|NP_395197.1| (NC_003131) putative transposase ORFA [Yersini a pestis] gi|400176|sp|Q00931|LCRS_YERPE Low calcium response locus protein S%2C gi|11354319|pir||T43562 probable IS element protein - Yersinia pestis plasmid pCD1%2C gi|155470|gb|AAA 27655.1| (M83986) lcrS [Yersinia pseudotuberculosis] gi|2996256|gb|AAC62579.1| (AF053946) low calcium response locus proteins homolog [Yersinia pestis] gi|3822107|gb|AAC69827.1 | (AF074612) putative IS element protein [Yersinia pestis]%2C gi|5832483|emb|CAB54940.1| (AL117189) putative transposase ORFA [Yersinia pestis]%3B. Contains Transposase%2C IS3/IS911family (Interpro|IPR002514) gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD20 YP_pCD21 pCD21 yscM yscM 15842 16189 - putative type III secretion regulatory protein YscM Best Blastp hit %3D gi|16082750|ref|NP_395196.1| (NC_003131) putative type III secretion regulatory protein [Yersinia pestis] gi|401695|sp|Q00930|yscM_YER PE Yop proteins translocation protein M (Low calcium response locus protein Q) gi|282058|pir||B41877 LCR negative regulator lcrQ [similarity] - Yersinia pseudotuberculosis%2C gi|11 281982|pir||T43563 LCR negative regulator LcrQ - Yersinia pestis plasmid pCD1%2C gi|155469|gb|AAA27654.1| (M83986) lcrQ [ Yersinia pseudotuberculosis]%2C gi|2996263|gb|AAC62586.1| (AF0 53946) Yop proteins translocation protein M homolog [Yersinia pestis]%2C gi|3822052|gb|AAC69772.1| (AF074612) LCR negative regulator [Yersinia pestis] gi|5832482|emb|CAB54939.1| (A L117189) putative type III secretion regulatory protein [Yersinia pestis] gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD21 YP_pCD22 pCD22 yscL yscL 16414 17079 - putative typee III secretion protein YscL Best Blastp hit %3Dgi|16082749|ref|NP_395195.1| (NC_003131) putative type III secretion protein [Yersinia pestis]%2C gi|401694|sp|Q00928|yscL_YERPE Yop proteins translocation protein L (Low calcium response locus protein KC)%2C gi|11354332|pir||T43564 type III secretion protein yscL - Yersinia pestis plasmid pCD1 gi|155468|gb|AAA27653 .1| (M83986) lcrKc [Yersinia pseudotuberculosis]%2C gi|2996273 |gb|AAC62596.1| (AF053946) Yop proteins translocation protein L homolog [Yersinia pestis]%2C gi|3822053|gb|AAC69773.1| (AF074612) type III secretion protein [Yersinia pestis]%2C gi|5 832481|emb|CAB54938.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD22 YP_pCD23 pCD23 yscK yscK 17025 17675 - putative type III secretion protein YscK Best Blastp hit %3Dgi|16082748|ref|NP_395194.1| (NC_003131) putative type III secretion protein [Yersinia pestis]%2C gi|401693|sp|Q00927|yscK_YERPE Yop prot eins translocation protein K (Low calcium response locus protein KB)%2C gi|11282516|pir||T43565 type III secretion protein yscK - Yersinia pestis plasmid pCD1 gi|155467|gb|AAA27652 .1| (M83986) lcrKb [Yersinia pseudotuberculosis]%2C gi|2996282 |gb|AAC62605.1| (AF053946) Yop proteins translocation prote in K homolog [Yersinia pestis]%2C gi|3822054|gb|AAC69774.1| (A F074612) type III secretion protein [Yersinia pestis]%2C gi|58 32480|emb|CAB54937.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD23 YP_pCD24 pCD24 yscJ yscJ 17654 18388 - putative type III secretion lipoprotein YscJ Best Blastp hit %3Dgi|16082747|ref|NP_395193.1| (NC_003131) putative type III secretion lipoprotein [Yersinia pestis]%2C gi|401692|sp|Q00926|yscJ_YERPE Yop proteins translocation lipoprotein J precursor (YlpB lipoprotein) (Low calcium response locus protein KA) gi|11279457| pir||T43566 translocation lipoprotein J - Yersinia pestis plasmid pCD1%2C gi|155466|gb|AAA27651.1| (M83986) lcrKa [Yersinia pseudotuberculosis] gi|2996284|gb|AAC62607.1| (AF053946) Yop proteins translocation lipoprotein J [Yersinia pestis] gi|3822055|gb|AAC69775.1| (AF074612) type III secretion protein [Yersinia pestis]%2C gi|5832479|emb|CAB54936.1| (AL11718 9) putative type III secretion lipoprotein [Yersinia pestis].%3B . Contains Flagellar FliF M-ring protein (Interpro|IPR000067%2C Biological Process: ciliary/flagellar motility (GO:0001539)%2C Molecular Function: motor (GO:0003774)%2C Cellular Component: flagellar basal body%2C MS ring (sensu Bacteria) (GO:0009431)). Contains Type III secretion syste gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD24 YP_pCD25 pCD25 yscI yscI 18395 18742 - putative type III secretion protein YscI Best Blastp hit %3Dgi|16082746|ref|NP_395192.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|401691|sp|Q00933|yscI_YERPE Yop proteins translocation protein I (Low calcium response locus protein O) gi|11280509|pir||T43567 type III secretion protein yscI - Yersinia pestis plasmid pCD1%2C gi|155465|gb|AAA27650.1| (M83986) lcrO [Yersinia pseudotuberculosis]%2C gi|2996285|g b|AAC62608.1| (AF053946) Yop proteins translocation protein I homolog [Yersinia pestis] gi|3822056|gb|AAC69776.1| (AF074612) type III secretion protein [Yersinia pestis]%2C gi|5832 478|emb|CAB54935.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD25 YP_pCD26 pCD26 yscH yscH 18743 19240 - putative type III secretion protein YscH Best Blastp hit %3Dgi|16082745|ref|NP_395191.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|401690|sp|Q00929|yscH_YERPE Yop proteins translocation protein H (Low calcium response locus protein P) gi|11282515|pir||T43568 translocation protein H homolog - Yersinia pestis plasmid pCD1%2C gi|155464|gb|AAA27649. 1| (M83986) lcrP [Yersinia pseudotuberculosis]%2C gi|2996224|g b|AAC62547.1| (AF053946) Yop proteins translocation protein H homolog [Yersinia pestis] gi|3822108|gb|AAC69828.1| (AF074612) secreted protein [Yersinia pestis]%2C gi|5832477|emb|CA B54934.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD26 YP_pCD27 pCD27 yscG yscG 19237 19584 - putative type III secretion protein YscG Best Blastp hit %3Dgi|16082744|ref|NP_395190.1| (NC_003131) putative type III secretion protei n [Yersinia pestis] gi|11282514|pir||T43569 translocation protein G homolog - Yersinia pestis plasmid pCD1%2C gi|2996225|gb|AAC62548.1| (AF053946) Yop proteins translocation protein G homolog [Yersinia pestis]%2C gi|3822057|gb|AAC69777.1| (AF 074612) type III secretion protein [Yersinia pestis]%2C gi|583 2476|emb|CAB54933.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD27 YP_pCD28 pCD28 yscF yscF 19586 19849 - putative type III secretion protein YscF Best Blastp hit %3Dgi|16082743|ref|NP_395189.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|11354331|pir||T43570 type III secret ion protein yscF - Yersinia pestis plasmid pCD1%2C gi|2996226| gb|AAC62549.1| (AF053946) Yop proteins translocation protein F homolog [Yersinia pestis]%2C gi|3822058|gb|AAC69778.1| (AF074612) type III secretion protein [Yersinia pestis]%2C gi|583 2475|emb|CAB54932.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD28 YP_pCD29 pCD29 yscE yscE 19850 20050 - putative type III secretion protein YscE Best Blastp hit %3Dgi|16082742|ref|NP_395188.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|11354330|pir||T43571 type III secretion protein yscE - Yersinia pestis plasmid pCD1%2C gi|2996227| gb|AAC62550.1| (AF053946) Yop proteins translocation protein E homolog [Yersinia pestis]%2C gi|3822059|gb|AAC69779.1| (AF 074612) type III secretion protein [Yersinia pestis]%2C gi|583 2474|emb|CAB54931.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD29 YP_pCD30 pCD30 yscD yscD 20047 21306 - putative type III secretion protein YscD Best Blastp hit %3Dgi|16082741|ref|NP_395187.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|11282513|pir||T43572 type III secret ion protein yscD - Yersinia pestis plasmid pCD1%2C gi|155447|g b|AAA27639.1| (M83225) ORF [Yersinia pestis]%2C gi|2996228|gb| AAC62551.1| (AF053946) Yop proteins translocation protein D homolog [Yersinia pestis]%2C gi|3822060|gb|AAC69780.1| (AF074 612) type III secretion protein [Yersinia pestis] gi|5832473|emb|CAB54930.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD30 YP_pCD31 pCD31 yscC yscC 21303 23126 - putative type III secretion protein YscC Best Blastp hit %3Dgi|16082740|ref| NP_395186.1| (NC_003131) putative type III secretion protein [Yersinia pestis]%2C gi|11354329|pir||T43573 type III secret ion protein yscC - Yersinia pestis plasmid pCD1%2C gi|155446|g b|AAA27638.1| (M83225) KIM5 [Yersinia pestis] gi|2996229|gb |AAC62552.1| (AF053946) Yop proteins translocation protein C homolog [Yersinia pestis] gi|3822061|gb|AAC69781.1| (AF07 4612) type III secretion protein [Yersinia pestis] gi|58324 72|emb|CAB54929.1| (AL117189) putative type III secretion protein [Yersinia pestis]%3B. Contains Bacterial general secretion pathway protein D (Interpro|IPR001775%2C Biological Process: protein secretion (GO:0009306)%2C Cellular Component: membrane (GO:0016020)). Contains Type III secretion system outer membrane G protein (Interpro|IPR003522%2C Biological Process: protein secretion (GO:0009306)%2C Molecular Function: type III protein (virulence-related) secretor (GO:0015448)). Contains Bacterial type II secretion system pro gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD31 YP_pCD32 pCD32 yscB yscB 23132 23545 - hypothetical protein Best Blastp hit %3Dgi|16082739|ref|NP_395185.1| (NC_003131) hypothetical protein YPCD1.51 [Yersinia pestis]%2C gi|11282512|pir||T43574 translocation protein B homolog - Yersinia pestis plasmid pCD1 gi|155445|gb|AAA27637.1| (M83225) ORF%3B putative [Yersinia pestis]%2C gi|2996230 |gb|AAC62553.1| (AF053946) Yop proteins translocation protein B homolog [Yersinia pestis] gi|3822109|gb|AAC69829.1| (AF074612) unknown [Yersinia pestis]%2C gi|5832471|emb|CAB54928.1| (AL117189) hypothetical protein YPCD1.51 [Yersinia pestis] gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD32 YP_pCD33 pCD33 yscA yscA 23771 23869 - hypothetical protein YscA hypothetical protein yscA%2C len: 32 aa%3B similar to corresponding CDS from Y. pestis CO92 plasmid pCD1(AL117189) and KIM5 pCD1 (EMBL:AF053946%2C AF074612) (32 aa). Highly similar to YSCA_YEREN (EMBL:M74011)%2C yscA%2C from Yersinia enterocolitica plasmid pYV (32 aa). gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD33 YP_pCD34 pCD34 virF virF 23948 24763 - putative thermoregulatory protein VirF Best Blastp hit %3Dgi|16082737|ref|NP_395183.1| (NC_003131) putative thermoregulatory protein (271 aa)[Yersinia pestis]%2C gi|126024|sp|P28808|LCRF_YERPE Thermoregulatory protein lcrF%2C gi|476818|pir||A42884 transcription factor lcrF - Yersinia pestis plasmid pCD1%2C gi|150564|gb|AAA255 58.1| (M86690) thermoregulatory protein [Plasmid pCD1] gi|2996231|gb|AAC62554.1| (AF053946) thermoregulatory transcription factor LcrF [Yersinia pestis] gi|3822062|gb|AAC69782.1 | (AF074612) LCR activator [Yersinia pestis]%2C gi|5832469|emb |CAB54926.1| (AL117189) putative thermoregulatory protein [ Yersinia pestis]%3B . Contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C Molecular Function: transcription factor (GO:0003700)%2C Cellular Component: intracellular (GO:0005622)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)) gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD34 YP_pCD35 pCD35 virG virG 24887 25282 - putative Yop targeting lipoprotein VirG Best Blastp hit %3Dgi|16082736|ref|NP_395182.1| (NC_003131) putative Yop targeting lipoprotein [Yersinia pestis] gi|11280621|pir||T43577 yscC lipoprotein chaperone yscW - Yersinia pestis plasmid pCD1%2C gi|2996232|g b|AAC62555.1| (AF053946) pre-lipoprotein VirG homolog [Yersinia pestis] gi|3822063|gb|AAC69783.1| (AF074612) YscC lipoprotein chaperone [Yersinia pestis]%2C gi|5832468|emb|CAB54925.1| (AL117189) putative Yop targeting lipoprotein [Yersinia pestis] gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD35 YP_pCD36 pCD36 yscU yscU 25858 26922 - putative type III secretion protein YscU Best Blastp hit %3Dgi|16082735|ref|NP_395181.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|732269|sp|P40300|yscU_YERPE Yop proteins translocation protein U%2C gi|11279821|pir||T43578 type III secretion protein yscU - Yersinia pestis plasmid pCD1 gi|475126|gb|AAA27681.1| (L25667) yscU [Yersinia pseudotuberculosis]%2C gi|2996233|gb|AAC62556.1| (AF053946) Yop proteins translocation protein U homolog [Yersinia pestis]%2C gi|3822064|gb|AAC69784.1| (AF074612) type III secretion protein [Yersinia pestis] gi|5832467|emb|CAB54924.1| (AL117189) putative type III secretion protein [Yersinia pestis]%3B . Contains Type III secretion exporter (Interpro|IPR006135%2C Biological Process: protein secretion (GO:0009306)%2C Cellular Component: membrane (GO:0016020)). Contains Type III secretion protein HrpY/HrcU (Interpro|IPR006307) gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD36 YP_pCD37 pCD37 yscT yscT 26922 27707 - putative type III secretion protein YscT Best Blastp hit %3Dgi|16082734|ref|NP_395180.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|732268|sp|P40299|yscT_YERPE Yop proteins translocation protein T%2C gi|11282511|pir||T43579 type III secretion protein yscT - Yersinia pestis plasmid pCD1%2C gi |475125|gb|AAA27680.1| (L25667) yscT [Yersinia pseudotuberculosis]%2C gi|2996235|gb|AAC62558.1| (AF053946) Yop proteins translocation protein T homolog [Yersinia pestis]%2C gi|3822065|gb|AAC69785.1| (AF074612) type III secretion protein [Yersinia pestis] gi|5832466|emb|CAB54923.1| (AL117189) putative type III secretion protein [Yersinia pestis]%3B . Contains Bacterial export protein%2C family 1 (Interpro|IPR002010%2C Biological Process: protein targeting (GO:0006605)%2C Cellular Component: membrane (GO:0016020)). Contains Type III secretion protein SpaR/YscT (Interpro|IPR006304) gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD37 YP_pCD38 pCD38 yscS yscS 27704 27970 - type III secretion protein yscS YscS Best Blastp hit %3Dgi|10955565|ref|NP_052406.1| (NC_002120) YscS [Yersinia enterocolitica]%2C gi|16082733|ref|NP_395179.1| (NC_003131) putative type III secretion protein [Yersinia pestis]%2C gi|732267|sp|P40298|yscS_Y ERPE Yop proteins translocation protein S%2C gi|11278554|pir||T43580 type III secretion protein yscS - Yersinia pestis plasmid pCD1 gi|475124|gb|AAA27679.1| (L25667) yscS [Yersinia pseudotuberculosis]%2C gi|2996236|gb|AAC62559.1| (AF053946) Yop proteins translocation protein S homolog [Yersinia pestis]%2C gi|3822066|gb|AAC69786.1| (AF074612) type III secretion protein [Yersinia pestis] gi|4324352|gb|AAD16829.1| (AF1029 90) YscS [Yersinia enterocolitica]%2C gi|5832465|emb|CAB54922.1| (AL117189) putative type III secretion protein [Yersinia pestis] gi|14579351|gb|AAK69228.1|AF336309_23 (AF336309) YscS [Yersinia enterocolitica]%2C gi|23630558|gb|AAN37514.1| (AY150843) YscS [Yersinia enterocolitica]%3B . Contains Bacterial export protein FliQ%2C family 3 (Interpro|IPR00219 gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD38 YP_pCD39 pCD39 yscR yscR 27972 28625 - putative Yop secretion membrane protein YscR Best Blastp hit %3Dgi|16082732|ref|NP_395178.1| (NC_003131) putative Yop secretion membrane protein [Yersinia pestis]%2C gi|732266|sp|P40297|yscR_YERPE Yop proteins translocation protein R%2C gi|1073736|pir||B36955 low Ca2+ response stimulon regulation/secretion protein yscR - Yersinia pestis plasmid pCD1 gi|475123|gb|AAA27678.1| (L25 667) yscR [Yersinia pseudotuberculosis]%2C gi|2465659|gb|AAB72 201.1| (AF020214) YscR [Yersinia pestis]%2C gi|2996237|gb|AAC6 2560.1| (AF053946) Yop proteins translocation protein R homolog [Yersinia pestis]%2C gi|3822067|gb|AAC69787.1| (AF074612) type III secretion protein [Yersinia pestis] gi|5832464|emb|CAB54921.1| (AL117189) putative Yop secretion membrane protein [Yersinia pestis]%3B . Contains Yop virulence translocation protein R (Interpro|IPR005773%2C Biological Process: protein transport (GO:0015031)%2C Molecular Function: type III protein (virulence-related) secretor (GO:0015448)%2C Cellular Component: integral membrane protein (GO:00 gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD39 YP_pCD40 pCD40 yscQ yscQ 28622 29545 - putative type III secretion protein YscQ Best Blastp hit %3Dgi|16082731|ref|NP_395177.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|1176912|sp|P42713|yscQ_YERPE Yop proteins translocation protein Q%2C gi|1073737|pir||A36955 transl ocation protein Q - Yersinia pestis plasmid pCD1%2C gi|2465658 |gb|AAB72200.1| (AF020214) YscQ [Yersinia pestis] gi|2996238|gb|AAC62561.1| (AF053946) Yop proteins translocation protein Q [Yersinia pestis] gi|3822068|gb|AAC69788.1| (AF074612) type III secretion protein [Yersinia pestis]%2C gi|5832463|emb|CAB54920.1| (AL117189) putative type III secretion protein [Yersinia pestis]%3B . Contains Flagellar motor switch FliN protein (Interpro|IPR001172%2C Biological Process: ciliary/flagellar motility (GO:0001539)%2C Molecular Function: motor (GO:0003774)%2C Biological Process: chemotaxis (GO:0006935)%2C Cellular Component: flagellar basal body (sensu Bacteria) (GO:0009425)). Contains Surface presentation of antigens (SPOA) protein (Interpro|IPR001543). Contains Type II gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD40 YP_pCD41 pCD41 yscP yscP 29542 30909 - putative type III secretion protein YscP Best Blastp hit %3Dgi|16082730|ref|NP_395176.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|732264|sp|P40295|yscP_YERPE Yop proteins translocation protein P%2C gi|11280759|pir||T43583 type III secretion protein yscP - Yersinia pestis plasmid pCD1%2C gi |475121|gb|AAA27676.1| (L25667) yscP [Yersinia pseudotuberculosis]%2C gi|2465657|gb|AAB72199.1| (AF020214) YscP [Yersinia pestis]%2C gi|2996239|gb|AAC62562.1| (AF053946) Yop proteins translocation protein P [Yersinia pestis]%2C gi|3822069|gb|AAC69789.1| (AF074612) type III secretion protein [Yersinia pestis] gi|5832462|emb|CAB54919.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD41 YP_pCD42 pCD42 yscO yscO 30909 31373 - putative type III secretion protein YscO Best Blastp hit %3Dgi|16082729|ref|NP_395175.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|11354333|pir||T43584 type III secretion protein yscO - Yersinia pestis plasmid pCD1%2C gi|2465656|gb|AAB72198.1| (AF020214) YscO [Yersinia pestis]%2C gi|2996240 |gb|AAC62563.1| (AF053946) Yop proteins translocation protein O [Yersinia pestis]%2C gi|3822070|gb|AAC69790.1| (AF074612) type III secretion protein [Yersinia pestis] gi|5832461|emb|CAB54918.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD42 YP_pCD43 pCD43 yscN yscN 31370 32689 - putative Yops secretion ATP synthase YscN Best Blastp hit %3Dgi|16082728|ref|NP_395174.1| (NC_003131) putative Yops secretion ATP synthase (439 aa) [Yersinia pestis]%2C gi|11266663|pir||T43585 yopS secretion protein - Yersinia pestis plasmid pCD1%2C gi|2996241|gb|AAC62564.1| (AF053946) Yops secretion ATPase YscN homolog [Yersinia pestis]%2C gi|3822071|gb|AAC69791.1| (AF074612) Yops secretion protein [Yersinia pestis]%2C gi|5832460|emb|CAB54917.1| (AL117189) putative Yops secretion ATP synthase [Yersinia pestis]%2C gi|14579346|gb|AAK69223.1|AF336309_18 (AF336309) YscN [Yersinia enterocolitica]%2C gi|23630601|gb|AAN37557.1| (AY15 0843) YscN [Yersinia enterocolitica]%3B . Contains H+-transporting two-sector ATPase%2C alpha/beta subunit%2C central region (Interpro|IPR000194%2C Molecular Function: hydrogen-transporting two-sector ATPase (GO:0003936)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: hydrogen transport (GO:0006818)). Contains Disease resistance protein (Interpro|IPR000767%2C Molecular Function: gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD43 YP_pCD44 pCD44 yopN yopN 32887 33768 + putative membrane-bound Yop targeting protein YopN Best Blastp hit %3Dgi|16082727|ref|NP_395173.1| (NC_003131) putative membrane-bound Yop targeting protein (293 aa) [Yersinia pestis]%2C gi|126023|sp|P16160|yopN_YERP E Outer membrane protein yopN (Yop4b) (LcrE)%2C gi|97012|pir|| S15320 yopN protein - Yersinia pseudotuberculosis virulence plasmid%2C gi|11281981|pir||T43586 secretion control protein yopN - Yersinia pestis plasmid pCD1 gi|48634|emb|CAA36129.1 | (X51833) LcrE product (AA 1-293) [Yersinia pseudotuberculosis]%2C gi|2996242|gb|AAC62565.1| (AF053946) outer membrane protein YopN (LcrE) homolog [Yersinia pestis]%2C gi|3822072|gb|AAC69792.1| (AF074612) secretion control protein [Yersinia pestis] gi|5832459|emb|CAB54916.1| (AL117189) putative membrane-bound Yop targeting protein [Yersinia pestis] gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD44 YP_pCD45 pCD45 tyeA tyeA 33749 34027 + Yop secretion and targeting control protein TyeA Best Blastp hit %3Dgi|23630563|gb|AAN 37519.1| (AY150843) TyeA [Yersinia enterocolitica] gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD45 YP_pCD46 pCD46 sycN sycN 34014 34385 + putative type III secretion protein SycN Best Blastp hit %3Dgi|16082725|ref|NP_395171.1| (NC_003131) putative type III secretion protein (123 aa) [Yersinia pestis]gi|140990|sp|P16162|Y6D7_YERPE Hypothet ical protein YPCD1.37c%2C gi|79201|pir||S15322 hypothetical protein 2 - Yersinia pseudotuberculosis plasmid gi|11281980|pir||T43588 hypothetical protein Y0044 - Yersinia pestis plasmid pCD1%2C gi|581840|emb|CAA36131.1| (X51833) ORF 2 (AA 1-12 3) [Yersinia pseudotuberculosis] gi|2996244|gb|AAC62567.1| (AF053946) unknown [Yersinia pestis]%2C gi|3822074|gb|AAC69794.1| (AF074612) unknown [Yersinia pestis]%2C gi|5832457|emb|CAB 54914.1| (AL117189) putative type III secretion protein [Yersinia pestis] gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD46 YP_pCD47 pCD47 yscX yscX 34382 34750 + putative type III secretion protein YscX Best Blastp hit %3Dgi|16082724|ref|NP_395170.1| (NC_003131) putative type III secretion protein (122 aa) [Yersinia pestis]%2C gi|11282510|pir||T43589 hypothetical protein Y0045 - Yersinia pestis plasmid pCD1%2C gi|2996246|gb|AAC62569.1| (AF053946) unknown [Yersinia pestis] gi|3822075|gb|AAC69795.1| (AF074612) unknown [Yersinia pestis]%2C gi|58324 56|emb|CAB54913.1| (AL117189) putative type III secretion protein [Yersinia pestis] gi|14579341|gb|AAK69218.1|AF336309 _13 (AF336309) YscX [Yersinia enterocolitica]%2C gi|23630565|g b|AAN37521.1| (AY150843) YscX [Yersinia enterocolitica] gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD47 YP_pCD48 pCD48 yscY yscY 34747 35091 + putative type III secretion protein YscY Best Blastp hit %3Dgi|10955555|ref|NP_052396.1| (NC_002120) YscY (114 aa) [Yersinia enterocolitica] gi|16082723|ref|NP_395169.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|140992|sp|P21209|Y6D5_Y ERPE Hypothetical protein YPCD1.35c%2C gi|96962|pir||E35392 hypothetical protein 4 - Yersinia enterocolitica%2C gi|11282509|pir||T43590 hypothetical protein Y0046 - Yersinia pestis plasmid pCD1 gi|1197038|gb|AAA98432.1| (M32097) unknown protein [Plasmid pYV03]%2C gi|2996247|gb|AAC62570.1| (AF053946) unknown [Yersinia pestis]%2C gi|3822076|gb|AAC69796.1| (AF074612) unknown [Yersinia pestis] gi|4324342|gb|AAD16819.1| (AF102 990) YscY [Yersinia enterocolitica]%2C gi|5832455|emb|CAB54912 .1| (AL117189) putative type III secretion protein [Yersinia pestis] gi|23630574|gb|AAN37530.1| (AY150843) YscY [Yersi nia enterocolitica] gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD48 YP_pCD49 pCD49 yscV yscV 35078 37192 + putative membrane-bound Yop protein YscV Best Blastp hit %3Dgi|16082722|ref|NP_395168.1| (NC_003131) putative membrane-bound Yop protein (704 aa) [Yersinia pestis]%2C gi|17380420|sp|P31487|LCRD_YERPE Low calcium response locus protein D%2C gi|11279044|pir||T43591 low calcium response protein D - Yersinia pestis plasmid pCD1 gi|155461|gb|AAA27647.1| (M96850) lcrD [Yersinia pseudotuberculosis]%2C gi|2996248|gb|AAC62571.1| (AF053946) low calcium response locus protein D [Yersinia pestis] gi|3822077|gb|AAC 69797.1| (AF074612) secretion protein [Yersinia pestis]%2C gi|5832454|emb|CAB54911.1| (AL117189) putative membrane-bound Yop protein [Yersinia pestis] gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD49 YP_pCD50 pCD50 lcrR lcrR 37189 37629 + hypothetical protein LcrR Best Blastp hit %3Dgi|16082721|ref|NP_395167.1| (NC_003131) hypothetical protein lcrR [Yersini a pestis] gi|17379189|sp|P19393|LCRR_YERPE Low calcium response locus protein R%2C gi|11282508|pir||T43592 low calcium response protein R - Yersinia pestis plasmid pCD1 gi|155462|gb|AAA27648.1| (M96850) lcrR [Yersinia pseudotuberculosis]%2C gi|2996249|gb|AAC62572.1| (AF053946) low calcium response locus protein R [Yersinia pestis] gi|3822111|gb|AAC69831.1| (AF074612) unknown [Yersinia pestis]%2C gi|5832453|emb|CAB54910 .1| (AL117189) hypothetical protein lcrR [Yersinia pestis] gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD50 YP_pCD51 pCD51 lcrG lcrG 37671 37958 + probable Yop regulator LcrG Best Blastp hit %3Dgi|16082720|ref|NP_395166.1| (NC_003131) putative Yop regulator (95 aa) [Yersinia pestis] gi|126025|sp|P19394|LCRG_YERPE Low calcium response locus protein G%2C gi|96996|pir||A33601 low calcium response protein G - Yersinia pestis plasmid pCD1 gi|280146|pir||A37314 regulatory protein LcrG - Yersinia pseudotuberculosis%2C gi|155449|gb|AAA27640.1| (M26405) lcrG [Yersinia pestis]%2C gi|1 55457|gb|AAA27644.1| (M57893) V-antigen [Yersinia pseudotuberculosis] gi|2996250|gb|AAC62573.1| (AF053946) low calcium response locus protein G [Yersinia pestis] gi|3822078|gb|AAC69798.1| (AF074612) V-antigen [Yersinia pestis]%2C gi|583245 2|emb|CAB54909.1| (AL117189) putative Yop regulator [Yersinia pestis] gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD51 YP_pCD52 pCD52 lcrV lcrV 37960 38934 + V antigen LcrV Best Blastp hit %3D gi|7578513|gb|AAF64076.1|AF167309_1 (AF167309) V antigen [Yersinia pestis]%3B . Contains Low calcium response V antigen (Interpro|IPR005413%2C Cellular Component: extracellular (GO:0005576)%2C Biological Process: pathogenesis (GO:0009405)) gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD52 YP_pCD53 pCD53 sycD sycD 38937 39443 + putative yopB/yopD chaperone SycD Best Blastp hit %3Dgi|16082718|ref|NP_395164.1| (NC_003131) putative yopB/yopD chaperone [Yersinia pestis] gi|126026|sp|P21207|LCRH_YERPE Low calcium response locus protein H%2C gi|96997|pir||C33601 low calcium response protein H - Yersinia pestis plasmid pCD1%2C gi|155451|gb| AAA27642.1| (M26405) lcrH [Yersinia pestis] gi|2996252|gb|AAC62575.1| (AF053946) low calcium response locus protein H [Yersinia pestis] gi|3822080|gb|AAC69800.1| (AF074612) YopB/D chaperone [Yersinia pestis]%2C gi|5832450|emb|CAB54907.1| (A L117189) putative yopB/yopD chaperone [Yersinia pestis]%3B . Contains TPR repeat (Interpro|IPR001440). Contains Gram-negative bacterial type III secretion SycD chaperone (Interpro|IPR005415%2C Biological Process: response to stress (GO:0006950)) gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD53 YP_pCD54 pCD54 yopB yopB 39421 40626 + putative Yop targeting protein YopB Best Blastp hit %3Dgi|16082717|ref|NP_395163.1| (NC_003131) putative Yop targeting protein (401 aa) [Yersinia pestis] gi|11354337|pir||T43596 yop targeting protein - Yersinia pestis plasmid pCD1%2C gi|2996253|gb|AAC62576.1| (AF053946) YopB homolog [Yersinia pestis]%2C gi|3822081|gb|AAC 69801.1| (AF074612) Yop targeting protein [Yersinia pestis] gi|5832449|emb|CAB54906.1| (AL117189) putative Yop targeting protein [Yersinia pestis]%3B . Contains Secretion system effector C (SseC) like protein (Interpro|IPR006972) gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD54 YP_pCD55 pCD55 yopD yopD 40645 41565 + putative Yop negative regulation/targeting component YopD Best Blastp hit %3D gi|16082716|ref|NP_395162.1| (NC_003131) putative Yop negative regulation/targeting component [Yersinia pestis] gi|11284339|pir||T43597 yop targeting negative regulator - Yersinia pestis plasmid pCD1%2C gi|2996254|gb|AAC62577.1| (AF053946) YopD homolog [Yersinia pestis] gi|3822082|gb|AAC69802.1| (AF074612) Yop targeting negative regulator [Yersinia pestis] gi|5832448|emb|CAB54905.1| (AL117189) putative Yop negative regulation/targeting component [Yersinia pestis] gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD55 YP_pCD56 pCD56 YP_pCD56 42033 42164 - probable transposase remant%2CBest Blastp hit %3D pir||T42893 probable transposase - Yersinia pestis plasmid pCD1 gb|AAC69803.1| (AF074612) putative transposase [Yersinia pestis] pseudogene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD56 YP_pCD57 pCD57 YP_pCD57 42199 42522 - hypothetical protein Best Blastp hit %3D pir||T42894 hypothetical protein Y0056 (107 aa) - Yersinia pestis plasmid pCD1%2C gb|AAC69804.1| (AF074612) unknown [Yersinia pestis] gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD57 YP_pCD58 pCD58 YP_pCD58 42556 42711 - putative transposase remnant.Best Blastp hit %3Dgi|6634699|emb|CAA77010.2| (Y18002) transposase [Yersinia intermedia] pseudogene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD58 YP_pCD59 pCD59 YP_pCD59 42691 42900 + hypothetical protein Best Blastp hit %3D pir||T42895 hypothetical protein Y0058 - Yersinia pestis plasmid pCD1 pir||T42895 hypothetical protein Y0058 - Yersinia pestis plasmid pCD1 len: 69 aa gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD59 YP_pCD60 pCD60 yopM yopM 43294 44397 + putative targeted effector protein YopM Best Blastp hit %3Dgi|16082715|ref|NP_395161.1| (NC_003131) putative targeted effector protein [Yersinia pestis]%2C gi|17380529|sp|P17778|yopM_YERPE Outer membrane protein yopM%2C gi|11354335|pir||T43599 yop targeted effector protein - Yersinia pestis plasmid pCD1%2C gi|2996257|gb|AAC62580.1| (AF053946) outer membrane protein YopM [Yersinia pestis]%2C gi|3822086|gb|AAC69806.1| (AF074612) Yop targeted effector protein [Yersinia pestis]%2C gi|5832447|emb|CAB54903.1| (AL117189) putative targeted effector protein [Yersinia pestis]%2C 409 aa%2C with a 43 aa deletion%2C which is leucine rich region(LRR)%3B highly similar to%2C gi|97006|pir|A33950%2CYopM protein-Yersinia pestis%3B highly similar to%2C gi|16975343|pdb|1JL5|A (Yersinia pestis YopM%2C454 aa) with 2 LRR deletions (43 aa and 35 aa). Contains Leucine-rich repeat (Interpro|IPR001611). Contains Leucine-rich repeat%2C bacterial type (Interpro|IPR007088) gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD60 YP_pCD61 pCD61 YP_pCD61 44440 44655 - putative transposase remnant%2C len: 71 aa%3B Best Blastp hit %3D pir||T43600 probable transposase (99 aa) - Yersinia pestis plasmid pCD1 gb|AAC62581.1| (AF053946) putative transposase [Yersinia pestis] pseudogene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD61 YP_pCD62 pCD62 YP_pCD62 44639 44758 - hypothetical protein Best Blastp hit %3Dpir||T42897 hypothetical protein Y0061 (39 aa) - Yersinia pestis plasmid pCD1 gb|AAC69807.1| (AF074612) unknown [Yersinia pestis] gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD62 YP_pCD63 pCD63 YP_pCD63 44914 45105 + possible transposase remnant%2C len: 63 aa%3B Best Blastp hit %3Dgi|16082713|ref|NP_395159.1| (NC_003131) YPCD1.24c%2C possible transposase remnant%2C len: 72 aa%3B highly similar to C-terminus of TR:O8792 1 (EMBL:Y18002) Yersinia intermedia putative transposase from IS1635.1 (245 aa) [Yersinia pestis]%2C gi|5832445|emb|CAB54 901.1| (AL117189) YPCD1.24c%2C possible transposase remnant%2C len: 72 aa%3B highly similar to C-terminus of TR:O87921 (EMBL :Y18002) Yersinia intermedia putative transposase from IS16 35.1 (245 aa) [Yersinia pestis] pseudogene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD63 YP_pCD64 pCD64 YP_pCD64 45633 46052 - hypothetical protein Best Blastp hit %3Dgi|16082712|ref|NP_395158.1| (NC_003131) hypothetical protein YPCD1.23 (139 aa) [Yersinia pestis] gi|11280834|pir||T42898 hypothetical protein Y0062 - Yersinia pestis plasmid pCD1%2C gi|3822088|gb|AAC69808.1| (AF074612) unknown [Yersinia pestis]%2C gi|5832444|emb|CAB 54900.1| (AL117189) hypothetical protein YPCD1.23 [Yersinia pestis] gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD64 YP_pCD65 pCD65 YP_pCD65 46324 46713 + hypothetical protein Best Blastp hit %3Dgi|16082711|ref|NP_395157.1| (NC_003131) hypothetical protein YPCD1.22c (129 aa) [Yersinia pestis] gi|11354279|pir||T42899 hypothetical protein Y0063 - Yersinia pestis plasmid pCD1%2C gi|3822089|gb|AAC69809.1| (AF074612) unknown [Yersinia pestis] gi|5832443|emb|CAB54899.1| (AL117189) hypothetical protein YPCD1.22c [Yersinia pestis] gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD65 YP_pCD66 pCD66 sycT sycT 46757 47155 - putative yopT chaperone SycT Best Blastp hit %3Dgi|16082710|ref|NP_395156.1| (NC_003131) putative yopT chaperone (132 aa) [Yersinia pestis] gi|11354338|pir||T42900 YopT chaperone - Yersinia pestis plasmid pCD1%2C gi|3822112|gb|AAC69832.1| (AF074612) YopT chaperone [Yersinia pestis]%2C gi|5832442|emb|CAB54898.1| (AL117189) putative yopT chaperone [Yersinia pestis] gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD66 YP_pCD67 pCD67 yopT yopT 47155 48123 - putative cytotoxic effector protein YopT Best Blastp hit %3Dgi|16082709|ref|NP_395155.1| (NC_003131) putative cytotoxic effector protein (322 aa) [Yersinia pestis]%2C gi|11354336|pir||T43601 yop targeted effector yopT - Yersinia pestis plasmid pCD1%2C gi|2996259|gb|AA C62582.1| (AF053946) unknown [Yersinia pestis] gi|3822113|gb|AAC69833.1| (AF074612) Yop targeted effector [Yersinia pestis]%2C gi|5832441|emb|CAB54897.1| (AL117189) putative cytotoxic effector protein [Yersinia pestis]%3B . Contains Yersinia/Haemophilus virulence surface antigen (Interpro|IPR003951). Contains Cysteine protease domain%2C YopT-type (Interpro|IPR006473) gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD67 YP_pCD68 pCD68 yopQ yopQ 48608 49171 + putative virulence determinant protein YopQ Best Blastp hit %3Dgi|16082708|ref|NP_395154.1| (NC_003131) putative virulence determinant protein (182 aa) [Yersinia pestis]%2C gi|11280497|pir||T43602 yop targeting protein yopK - Yersinia pestis plasmid pCD1 gi|2996260|gb |AAC62583.1| (AF053946) YopK (YopQ) homolog [Yersinia pestis]%2C gi|3822090|gb|AAC69810.1| (AF074612) Yop targeting prote in [Yersinia pestis] gi|5832440|emb|CAB54896.1| (AL117189) putative virulence determinant protein [Yersinia pestis]%3B . Contains Prenyl group binding site (CAAX box) (Interpro|IPR001230) gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD68 YP_pCD69 pCD69 YP_pCD69 49309 49554 + possible transposase remnant%2C len: 81 aa%3B Best Blastp hit %3Dgi|16082707|ref|NP_395153.1| (NC_003131) YPCD1.18c (48 aa)%2C possible transposase remnant%2C len: 48 aa%3B highly similar to a region of ORFB from several insertion element transposases e.g. TR:O31218 (EMBL :AF034211) Desulfovibrio vulgaris transposase ORFB from insertion element ISD1 (310 aa)%2C gi|5832439|emb|CAB54895.1| (AL117189) YPCD1.18c%2C possible transposase remnant%2C len: 48 aa%3B highly similar to a region of ORFB from several insertion element transposases e.g. TR:O31218 (EMBL:AF034211) Desulfovibrio vulgaris transposase ORFB from insertion element ISD1 (310 aa)%3B similar to putative transposase ORFB (144 aa) from Yersinia pestis (ref|NP_395198.1|emb|CAB54941.1|) pseudogene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD69 YP_pCD70 pCD70 ylpA ylpA 49687 50398 + similar to CDS for lipoprotein YlpA of Yersinia pestis CO92 pCD and Y. pestis KIM5 pCD1 (EMBL:AF053946%2C AF074612)%2Ccontaining the same frameshift after codon 22. pseudogene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD70 YP_pCD71 pCD71 YP_pCD71 50499 50822 + hypothetical protein Best Blastp hit %3D gi|16082706|ref|NP_395152.1| (NC_003131) hypothetical protein YPCD1.16c (107 aa) [Yersinia pestis] gi|11354280|pir||T42903 hypothetical protein Y0068 - Yersinia pestis plasmid pCD1%2C gi|3822091|gb|AAC6981 1.1| (AF074612) unknown [Yersinia pestis]%2C gi|5832438|emb|CA B54893.1| (AL117189) hypothetical protein YPCD1.16c [Yersinia pestis]%3B . Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C Molecular Function: transcription factor (GO:0003700)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)). Contains Transposase%2C IS3/IS911family (Interpro|IPR002514) gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD71 YP_pCD72 pCD72 YP_pCD72 50846 51304 + hypothetical protein Best Blastp hit %3Dgi|16082705|ref|NP_395151.1| (NC_003131) hypothetical protein YPCD1.15c (152 aa) [Yersinia pestis] gi|5832437|emb|CAB54892.1| (AL117189) hypothetical protein YPCD1.15c [Yersinia pestis] gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD72 YP_pCD73 pCD73 YP_pCD73 51413 51610 + putative transposase remnant%2C len: 65 aa%3B Best Blastp hit %3Dgi|16082704|ref|NP_395150.1| (NC_003131) putative transposase remnant [Yersinia pestis] gi|5832436|emb|CAB54891.1| (AL117189) putative transposase remnant [Yersinia pestis] pseudogene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD73 YP_pCD74 pCD74 sopA sopA 52458 53576 + putative plasmid partitioning transcription repressor Best Blastp hit %3D gi|16082703|ref|NP_395149.1| (NC_003131) putative plasmid partitioning transcription repressor (388 aa) [Yersinia pestis]%2C gi|3822093|gb|AAC69813.1| (AF074612) sopAB transcription repressor [Yersinia pes tis] gi|5832435|emb|CAB54890.1| (AL117189) putative plasmid partitioning transcription repressor [Yersinia pestis]%3B . Contains Bacterial regulatory protein%2C MerR family (Interpro|IPR000551%2C Molecular Function: transcription factor (GO:0003700)%2C Cellular Component: intracellular (GO:0005622)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)). Contains ATPase%2C ParA type (Interpro|IPR000707) gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD74 YP_pCD75 pCD75 sopB sopB 53561 54538 + putative plasmid partitioning control protein Best Blastp hit %3Dgi|16082702|ref|NP_395148.1| (NC_003131) putative plasmid partitioning control protein (320 aa) [Yersinia pestis]%2C gi|11278138|pir||T42906 plasmid partitioning control protein - Yersinia pestis plasmid pCD1%2C gi|3822094|gb|AAC69814.1| (AF074612) plasmid partitioning control protein [Yersinia pestis] gi|5832434|emb|CAB54889.1| (AL117189) putative plasmid partitioning control protein [Yersinia pestis]%3B . Contains ParB-like nuclease (Interpro|IPR003115%2C Molecular Function: DNA binding (GO:0003677)%2C Cellular Component: extrachromosomal circular DNA (GO:0005727)). Contains ParB-like partition protein (Interpro|IPR004437%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: plasmid partitioning (sensu Bacteria) (GO:0030542)) gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD75 YP_pCD76 pCD76 YP_pCD76 54686 54934 + hypothetical protein No significant database match found. gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD76 YP_pCD77 pCD77 YP_pCD77 55453 55656 + possible transposase remnant%2C len: 67 aa%3B Best Blastp hit %3Dgi|16082701|ref|NP_395147.1| (NC_003131) YPCD1.10c%2C possible transposase remnant%2C len: 83 aa%3B similar to many e.g. TR:P94785 (EMBL:X87 144) putative transposase from Erwinia herbicola plasmid pPATH insertion element IS1327 (234 aa) [Yersinia pestis]%2C gi| 5832433|emb|CAB54887.1| (AL117189) YPCD1.10c%2C possible transposase remnant%2C len: 83 aa%3B similar to many e.g. TR:P94785 (EMBL:X87144) putative transposase from Erwinia herbicola plasmid pPATH insertion element IS1327 (234 aa) [Yersinia pestis] pseudogene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD77 YP_pCD78 pCD78 YP_pCD78 55767 56042 + hypothetical protein Best Blastp hit %3D gi|16082700|ref|NP_395146.1| (NC_003131) hypothetical protein YPCD1.09c [Yersinia pestis] gi|11354282|pir||T42907 hypothetical protein Y0074 - Yersinia pestis plasmid pCD1%2C gi|3822095|gb|AAC69815.1| (AF074612) unknown [Yersinia pestis] gi|5832432|emb|CAB54886.1| (AL117189) hypothetical protein YPCD1.09c [Yersinia pestis]%3B . Contains Protein of unknown function UPF0156 (Interpro|IPR005360%2C Molecular Function: molecular_function unknown (GO:0005554)) gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD78 YP_pCD79 pCD79 YP_pCD79 56035 56334 + putative plasmid stabilization element ParE Best Blastp hit %3D gi|16082699|ref|NP_395145.1| (NC_003131) hypothetical protein YPCD1.08c (99 aa) [Yersinia pestis] gi|11354283|pir||T42908 hypothetical protein Y0075 - Yersinia pestis plasmid pCD1%2C gi|3822096|gb|AAC69816.1| (AF074612) unknown [Yersinia pestis] gi|5832431|emb|CAB54885.1| (AL117189) hypothetical protein YPCD1.08c [Yersinia pestis]%3B also simialr to gi|27365828|ref|NP_761356.1| Plasmid stabilization element ParE [Vibrio vulnificus CMCP6}. gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD79 YP_pCD80 pCD80 YP_pCD80 56176 56472 - hypothetical protein Best Blastp hit %3D gi|16082698|ref|NP_395144.1| (NC_003131) hypothetical protein YPCD1.07 [Yersinia pestis] gi|11354284|pir||T42909 hypothetical protein Y0076 - Yersinia pestis plasmid pCD1%2C gi|3822097|gb|AAC69817.1| (AF074612) unknown [Yersinia pestis] gi|5832430|emb|CAB54884.1| (AL117189) hypothetical protein YPCD1.07 [Yersinia pestis] gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD80 YP_pCD81 pCD81 yopE yopE 56474 57133 - putative outer membrane virulence protein YopE Best Blastp hit %3Dgi|16082697|ref|NP_395143.1| (NC_003131) putative outer membrane virulence protein (219 aa) [Yersinia pestis]%2C gi|401663|sp|P31493|yopE_YERPE Outer membrane virulence protein yopE%2C gi|11281979|pir||T43605 targeted effector yopE - Yersinia pestis plasmid pCD1 gi|155543|gb|AAA27672.1| (M34279) virulence determinant (yopE) [Yersinia pestis]%2C gi|2996264|gb|AAC62587.1| (AF053946) YopE [Yersinia pestis] gi|3822098|gb|AAC69818.1| (AF074612) targeted effector [Yersinia pestis]%2C gi|5832429|emb|CAB54883.1| (AL117189) putative outer membrane virulence protein [Yersinia pestis]%3B . Contains Yersinia virulence determinant YopE (Interpro|IPR003537%2C Molecular Function: GTPase activator (GO:0005096)%2C Cellular Component: membrane (GO:0016020)) gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD81 YP_pCD82 pCD82 sycE sycE 57327 57719 + putative yopE chaperone SycE Best Blastp hit %3Dgi|16082696|ref|NP_395142.1| (NC_003131) putative yopE chaperone (130 aa) [Yersinia pestis] gi|401546|sp|P31491|YERA_YERPE YopE regulator gi|11280760|pir||T43606 yopE chaperone sycE - Yersinia pestis plasmid pCD1%2C gi|455388|gb|AAA27671.1| (M34279) yopE regulator (yerA) [Yersinia pestis] gi|2996265|gb|AAC62588.1| (AF0539 46) YopE chaperone SycE [Yersinia pestis]%2C gi|3822099|gb|AAC69819.1| (AF074612) YopE chaperone [Yersinia pestis]%2C gi|583 2428|emb|CAB54882.1| (AL117189) putative yopE chaperone [Yersinia pestis]%3B . Contains Gram-negative bacterial type III secretion SycE chaperone (Interpro|IPR005416) gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD82 YP_pCD83 pCD83 YP_pCD83 57782 58279 - IS1222-like transposase Best Blastp hit %3Dgi|16082695|ref|NP_395141.1| (NC_003131) YPCD1.04%2C possible transposase remnant%2C len: 215 aa%3B similar to many e.g. TR:Q46612 (EMBL:X78 052) Enterobacter agglomerans IS1222 ORFB (276 aa). Truncated at N-terminus [Yersinia pestis]%2C gi|5832427|emb|CAB54881 .1| (AL117189) YPCD1.04%2C possible transposase remnant%2C len: 215 aa%3B similar to many e.g. TR:Q46612 (EMBL:X78052) Enterobacter agglomerans IS1222 ORFB (276 aa). Truncated at N-terminus [Yersinia pestis]%3B and emb|CAB46578.1| (AJ132945) IS1222-like transposase [Yersinia enterocolitica] (165 aa)%3B. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)) gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD83 YP_pCD84 pCD84 YP_pCD84 58463 58678 - hypothetical protein No significant database found. gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD84 YP_pCD85 pCD85 YP_pCD85 58682 59701 + probable transposase Best Blastp hit %3D pir||T43607 probable transposase (390 aa) - Yersinia pestis plasmid pCD1 gb|AAC62589.1| (AF053946) putative transposase [Yersinia pestis]%3B. Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)) gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD85 YP_pCD86 pCD86 YP_pCD86 59701 60132 + similar to gi|14917001|sp|P15026|ISTB_PSEAE Insertion sequence IS21 putative ATP-binding protein of Pseudomonas aeruginosa (265 aa). This CDS seems to have lost the C-terminal residues. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains IstB-like ATP-binding protein (Interpro|IPR002611) pseudogene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD86 YP_pCD87 pCD87 sycH sycH 60476 60901 + putative yopH targeting protein SycH Best Blastp hit %3Dgi|16082778|ref|NP_395224.1| (NC_003131) putative yopH targeting protein (141 aa) [Yersinia pestis] gi|2126212|pir||S70095 sycH protein - Yersinia pseudotuberculosis%2C gi|11282507|pir||T43609 yopH chaperone sycH - Yersinia pestis plasmid pCD1 gi|604517|gb|AAA99011.1| (U18727) SycH [Yersinia pseudotuberculosis]%2C gi|2996268|gb|AAC62591.1| (AF053946) YopH chaperone SycH protein homolog [Yersinia pestis] gi|3822100|gb|AAC69820.1| (AF074612) YopH chaperone [Yersinia pestis]%2C gi|5832510|emb|CAB54972.1| (AL117189) putative yopH targeting protein [Yersinia pestis] gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD87 YP_pCD88 pCD88 YP_pCD88 61049 61858 - putative transposase Best Blastp hit %3Dgi|16082777|ref|NP_395223.1| (NC_003131) putative transposase (269 aa) [Yersinia pestis] gi|5832509|emb|CAB54971.1| (AL117189) putative transposase [Yersinia pestis]%3B . Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)). Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)) gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD88 YP_pCD89 pCD89 YP_pCD89 61882 62148 - putative transposase Best Blastp hit %3D gi|16082776|ref|NP_395222.1| (NC_003131) putative transposase (88 aa) [Yersinia pestis] gi|22124418|ref|NP_667841.1| (NC_004088) putative transposase [Yersinia pestis KIM]%2C gi|11354320|pir||T43610 probable IS1617 transposase - Yersinia pestis plasmid pCD1 gi|2996269|gb|AAC62592.1| (AF053946) putative transposase [Yersinia pestis]%2C gi|3822101|gb|AAC69821.1| (AF074612) putative IS1617 transposase [Yersinia pestis] gi|5832508|emb|CAB54970.1| (AL117189) putative transposase [Yersinia pestis]%2C gi|21957203|gb|AAM84092.1|AE013652_1 (AE013652) putative transposase [Yersinia pestis KIM]%3B Contains Helix-turn-helix%2C Fis-type (Interpro|IPR002197%2C Molecular Function: transcription factor (GO:0003700)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)). Contains Transposase%2C IS3/IS911family (Interpro|IPR002514) gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD89 YP_pCD90 pCD90 YP_pCD90 62248 62577 - hypothetical protein Best Blastp hit %3Dgi|16082775|ref|NP_395221.1| (NC_003131) hypothetical protein YPCD1.92 (109 aa) [Yersinia pestis] gi|11354285|pir||T42914 hypothetical protein Y0085 - Yersinia pestis plasmid pCD1%2C gi|3822102|gb|AAC69822.1| (AF074612) unknown [Yersinia pestis] gi|5832507|emb|CAB54969.1| (AL117189) hypothetical protein YPCD1.92 [Yersinia pestis] gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD90 YP_pCD91 pCD91 YP_pCD91 62716 63180 - hypothetical protein Best Blastp hit %3D pir||T42915 hypothetical protein Y0086 - Yersinia pestis plasmid pCD1 pir||T42915 hypothetical protein Y0086 (154 aa)- Yersinia pestis plasmid pCD1 gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD91 YP_pCD92 pCD92 tnpR tnpR 63199 63834 - putative resolvase Best Blastp hit %3D gi|16082774|ref|NP_395220.1| (NC_003131) putative resolvase (183 aa) [Yersinia pestis] gi|11277978|pir||T43611 probable resolvase tnpR - Yersinia pestis plasmid pCD1%2C gi|2996270|gb|AAC62593.1| (AF053946) transposon gamma-delta resolvase (transposon TN1000) homolog [Yersinia pestis]%2C gi|3822104|gb|AAC69824.1| (AF074612) putative resolvase [Yersinia pestis] gi|5832506|emb|CAB54968.1| (AL117189) putative resolvase [Yersinia pestis]%3B . Contains Serine proteases%2C subtilase family (Interpro|IPR000209%2C Molecular Function: subtilase (GO:0004289)%2C Biological Process: proteolysis and peptidolysis (GO:0006508)). Contains Site-specific recombinase (Interpro|IPR006118%2C Molecular Function: recombinase (GO:0000150)%2C Biological Process: DNA recombination (GO:0006310)). Contains Resolvase%2C N-terminal (Interpro|IPR006119%2C Molecular Function: recombinase (GO:0000150)%2C Biological Process: DNA recombination (GO:0006310)). Contains Resolvase helix-turn-helix domain (Interpro|IPR0 gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD92 YP_pCD93 pCD93 tnpA tnpA 63914 66229 + putative transposase Best Blastp hit %3Dgi|16082773|ref|NP_395219.1| (NC_003131) putative transposase (771 aa) [Yersinia pestis] gi|11354328|pir||T43612 transposase - Yersinia pestis plasmid pCD1%2C gi|2996271|gb|AAC62594.1| (AF053946) transposase (Tn1000) homolog [Yersinia pestis] gi|5832505|emb|CAB54967.1| (AL117189) putative transposase [Yersinia pestis]%3B Contains Transposase Tn3 (Interpro|IPR002513) gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD93 YP_pCD94 pCD94 YP_pCD94 66226 66606 - possible transposase remnant%2C len: 126 aa%3B Best Blastp hit %3Dgi|16082772|ref|NP_395218.1| (NC_003131) YPCD1.89%2C possible transposase remnant%2C len: 126 aa%3B similar to corresponding CDS from Y. pestis KIM5 pCD1 (EMBL:AF053946) (126 aa). Similar to TR:O31218 (EMBL)gi|11354325|pir||T43613 probable transposase homolog - Yersinia pestis plasmid pCD1%2C gi| 2996272|gb|AAC62595.1| (AF053946) putative transposase homolog [Yersinia pestis]%2C gi|5832504|emb|CAB54966.1| (AL117189) YPCD1.89%2C possible transposase remnant%2C len: 126 aa%3B similar to corresponding CDS from Y. pestis KIM5 pCD1 (EMBL:AF0 53946) (126 aa) pseudogene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD94 YP_pCD95 pCD95 yadA yadA 67203 68515 + yadA%2C probable yadA invasion pseudogen%2C len: 434 aa%2C highly similar to YADA_YERPS (EMBL: 13883)%2C yadA from Y.pseudotuberculosis plasmid pIB1. Frameshift at codon 80. pseudogene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD95 YP_pCD96 pCD96 YP_pCD96 68841 69134 - possible transposase remnant%2C len: 97 aa%3B Best Blastp hit %3Dgi|16082771|ref|NP_395217.1| (NC_003131) YPCD1.85%2C possible transposase remnant%2C len: 97 aa%3B similar to 122_pCD1.seq_132%2C YPCD1.83c from Y. pestis CO92 pCD1(NC_003131) and ORF Y0094 from Y. pestis KIM5 pCD1 (EMBL:AF074612) but missing 10 N-terminal residues. Similar to e.g. YI91_SHIDY (EMBL:X17613) ORF from Shigella dysenteriae IS91. pseudogene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD96 YP_pCD97 pCD97 YP_pCD97 69146 69637 + hypothetical protein Best Blastp hit %3Dgi|16082770|ref|NP_395216.1| (NC_003131) hypothetical protein YPCD1.84c (163 aa) [Yersinia pestis] gi|11354318|pir||T42917 probable DNA helicase - Yersinia pestis plasmid pCD1%2C gi|3822105|gb|AAC69825.1| (AF074612) putative DNA helicase [Yersinia pestis]%2C gi|58325 02|emb|CAB54961.1| (AL117189) hypothetical protein YPCD1.84c [Yersinia pestis] gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD97 YP_pCD98 pCD98 YP_pCD98 69803 70126 + hypothetical protein Best Blastp hit %3Dgi|16082769|ref|NP_395215.1| (NC_003131) hypothetical protein YPCD1.83c [Yersinia pestis] gi|11354286|pir||T42918 hypothetical protein Y0094 - Yersinia pestis plasmid pCD1%2C gi|3822106|gb|AAC6982 6.1| (AF074612) unknown [Yersinia pestis] gi|5832501|emb|CAB54960.1| (AL117189) hypothetical protein YPCD1.83c [Yersinia pestis] gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCD98 YP_pCRY01 pCRY01 repA repA 739 1452 - putative RepA protein Best Blastp hit %3D gb|AAG47777.1|AF310258_2(AF310258) RepA [Pantoea stewartii subsp. stewartii]%2C len: 313aa%3Bref|NP_052446.1| (NC_002120) RepA [Yersinia enterocolitica]%2C len: 288 aa. Contains DNA gyrase%2C subunit B (Interpro|IPR000565%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: DNA topoisomerase (ATP-hydrolyzing) (GO:0003918)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: DNA metabolism (GO:0006259)%2C Biological Process: DNA topological change (GO:0006265)) gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY01 YP_pCRY02 pCRY02 YP_pCRY02 1523 1774 + hypothetical protein Best Blastp hit %3D gi|23108312|gb|ZP_00094541.1| (NZ_AAAV01000132) hypothetical protein [Novosphingobium aromaticivorans]%2C len: 482aa gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY02 YP_pCRY03 pCRY03 hipB1 hipB1 1901 2257 - putative transcriptional regulator Best Blastp hit %3D gi|21322195|gb|AAM47490.1| (AF468972) putative transcriptional regulator [Serratia sp. 2-68]%2C len: 88aa%3B match to COG1396%2C Predicted transcriptional regulators%2C [Transcription 3 recombination]. Contains Helix-turn-helix motif (Interpro|IPR001387%2C Molecular Function: DNA binding (GO:0003677)) gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY03 YP_pCRY04 pCRY04 nusG nusG 2508 2963 + transcription antiterminator Best Blastp hit %3D gi|14010731|ref|NP_114217.1| (NC_002759) unknown [Pseudomonas syringae pv. maculicola]%2C gi|13926148|gb|AAK49559.1|AF359557_24 (AF359557) unknown [Pseudomonas syringae pv. maculicola]%2C len: 188aa%3B match to COG0250%2C Transcription antiterminator%2C [Transcription 3 recombination]. Contains NGN (Interpro|IPR006645) gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY04 YP_pCRY05 pCRY05 YP_pCRY05 2981 3250 + hypothetical protein Best Blastp hit %3D gi|23266717|gb|AAN16354.1|AF483595_1 (AF483595) glucocorticoid receptor DNA binding factor 1 [Canis familiaris]%2C len: 1500aa gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY05 YP_pCRY06 pCRY06 YP_pCRY06 3255 3473 + putative ATP/GTP-binding protein remnant Best Blastp hit %3D gi|6320498|ref|NP_010578.1| (NC_001136) signal recognition particle receptor - alpha subunit%3Brp101p [Saccharomyces cerevisiae]%2C gi|2507410|sp|P32916|SRPR_YEAST SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT HOMOLOG (SR-ALPHA) (DOCKING PROTEIN ALPHA) (DP-ALPHA)%2C gi|2133136|pir||S70121 signal recognition particle receptor alpha chain - yeast (Saccharomyces cerevisiae)%2C gi|1230656|gb|AAB64468.1| (U51031) Srp101p: Signal recognition particle receptor alpha subunit homolog (Swiss Prot. accession number P32916). [Saccharomyces cerevisiae]%2C len: 621aa%3B Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)) gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY06 YP_pCRY07 pCRY07 virB1 virB1 3591 4301 + type IV secretory pathway VirB1 component Best Blastp hit %3D gi|12053566|emb|CAC20138.1| (AJ006342) Pilx1 protein [Escherichia coli]%2C len: 214aa%3B ref|NP_699276.1| (NC_004311) type IV secretion system protein VirB1 [Brucella suis1330]%2C len: 238aa%3B match to COG0741%2C Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)%2C [Cell envelope and outer membrane]. Contains SLT domain (Interpro|IPR000189) gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY07 YP_pCRY08 pCRY08 virB2 virB2 4298 4603 + type IV secretory pathway VirB2 component Best Blastp hit %3D gi|15919990|ref|NP_361050.1| (NC_003122) TraC protein [Plasmid pSB102]%2C gi|15722289|emb|CAC79181.1| (AJ304453) TraC protein [Plasmid pSB102]%2C len: 102aa%3Bref|NP_637828.1| (NC_003902) VirB2 protein [Xanthomonas campestris pv. campestris str. ATCC 33913]%2C len: 134aa gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY08 YP_pCRY09 pCRY09 virB4 virB4 4670 7354 + type IV secretory pathway VirB4 component Best Blastp hit %3D gi|12053569|emb|CAC20141.1| (AJ006342) Pilx4 protein [Escherichia coli]%2C len: 815aa%3B ref|NP_699273.1| (NC_004311) type IV secretion system protein VirB4 [Brucella suis1330]%2C len: 831aa%3B match to COG3451%2C Type IV secretory pathway%2C VirB4 components%2C [Cell motility protein secretion]. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains CagE%2C TrbE%2C VirB family component of type IV transporter system (Interpro|IPR004346%2C Molecular Function: ATP binding (GO:0005524)) gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY09 YP_pCRY10 pCRY10 virB5 virB5 7372 8076 + type IV secretion system VirB5 component Best Blastp hit %3D gi|10955840|ref|NP_053149.1| (NC_002144) ORF6 [Yersinia pestis]%2C gi|6175618|gb|AAF05102.1|AF152923_6 (AF152923) ORF6 [Yersinia pestis]%2C len: 273aa%3Bmb|CAC20142.1| (AJ006342) Pilx5 protein [Escherichia coli]%2C len: 245aa%3Bref|NP_361047.1| (NC_003122) TraF protein [Plasmid pSB102]%2C len: 242aa%3B ref|NP_361047.1| (NC_003122) TraF protein [Plasmid pSB102]%2C len: 242aa%3B gb|AAD56615.1|AF141604_5 (AF141604) VirB5 [Brucella melitensis biovar Suis]%2C len: 238aa gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY10 YP_pCRY11 pCRY11 YP_pCRY11 8090 8317 + hypothetical protein Best Blastp hit %3D gi|10955838|ref|NP_053151.1| (NC_002144) ORF4 [Yersinia pestis]%2C gi|6175616|gb|AAF05100.1|AF152923_4 (AF152923) ORF4 [Yersinia pestis]%2C len: 90aa%3Bmb|CAC20143.1| (AJ006342) Eex protein [Escherichia coli]%2C len: 86aa gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY11 YP_pCRY12 pCRY12 virB6 virB6 8328 9401 + type IV secretory pathway VirB6 component Best Blastp hit %3D gi|12053572|emb|CAC20144.1| (AJ006342) Pilx6 protein [Escherichia coli]%2C len: 351aa%3B match to COG3704%2C Type IV secretory pathway%2C VirB6 components%2C [Cell motility protein secretion] gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY12 YP_pCRY13 pCRY13 virB8 virB8 9622 10305 + type IV secretion system VirB8 component Best Blastp hit %3D gi|12053574|emb|CAC20146.1| (AJ006342) Pilx8 protein [Escherichia coli]%2C len: 240aa%3Bir||G47301 VirB8 homolog - Bordetella pertussis%2C len: 276aa%3B match to COG3736%2C Type IV secretion system%2C component VirB8%2C [Cell motility protein secretion] gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY13 YP_pCRY14 pCRY14 virB9 virB9 10302 11210 + type IV secretory pathway VirB9 component Best Blastp hit %3D gi|12053575|emb|CAC20147.1| (AJ006342) Pilx9 protein [Escherichia coli]%2C len: 309aa%3Bref|NP_699268.1| (NC_004311) type IV secretion system protein VirB9 [Brucella suis1330]%2C len: 289aa%3B match to COG3504%2C Type IV secretory pathway%2C VirB9 components%2C [Cell motility protein secretion]. Contains Type IV secretion system CagX conjugation protein (Interpro|IPR004357%2C Biological Process: pathogenesis (GO:0009405)) gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY14 YP_pCRY15 pCRY15 virB10 virB10 11254 12504 + type IV secretory pathway VirB10 component Best Blastp hit %3D gi|22995612|gb|ZP_00040040.1| (NZ_AAAL01000169) hypothetical protein [Xylella fastidiosa Dixon]%2C len: 322aa%3Bmb|CAC20148.1| (AJ006342) Pilx10 protein [Escherichia coli]%2C len: 404aa%3Bref|NP_699267.1| (NC_004311) type IV secretion system protein VirB10 [Brucella suis1330]%2C len: 391aa%3B match to COG2948%2C Type IV secretory pathway%2C VirB10 components%2C [Cell motility protein secretion]. Contains Bacterial conjugation TrbI-like protein (Interpro|IPR005498%2C Biological Process: conjugation (sensu Bacteria) (GO:0009291)) gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY15 YP_pCRY16 pCRY16 virB11 virB11 12494 13519 + type IV secretory pathway VirB11 component Best Blastp hit %3D gi|12053577|emb|CAC20149.1| (AJ006342) Pilx11 protein [Escherichia coli]%2C len: 345aa%3Bref|NP_699266.1| (NC_004311) type IV secretion system protein VirB11 [Brucella suis1330]%2C len: 361aa%3B match to COG0630%2C Type IV secretory pathway%2C VirB11 components%2C and related ATPases involved in archaeal flagella biosynthesis%2C [Cell motility protein secretion]. Contains Bacterial type II secretion system protein E (Interpro|IPR001482%2C Molecular Function: ATP binding (GO:0005524)%2C Cellular Component: intracellular (GO:0005622)%2C Biological Process: transport (GO:0006810)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)) gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY16 YP_pCRY17 pCRY17 YP_pCRY17 13516 13914 + hypothetical protein Best Blastp hit %3D gi|22961819|gb|ZP_00009425.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris]%2C len: 769aa gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY17 YP_pCRY18 pCRY18 YP_pCRY18 13950 14255 + hypothetical protein Best Blastp hit %3D gi|10955517|ref|NP_065369.1| (NC_002525) 43 pct identical(1 gap) to pir:A41865[KikA of plasmid pKM101] [Escherichia coli]%2C gi|9971711|dbj|BAB12662.1| (AP002527) 43 pct identical(1 gap) to pir:A41865[KikA of plasmid pKM101] [Escherichia coli]%2C len: 130aa gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY18 YP_pCRY19 pCRY19 YP_pCRY19 14289 14594 + putative dopa decarboxylase protein remnant Best Blastp hit %3D gi|2688876|gb|AAC47885.1| (AF015059) dopa decarboxylase [Loepa sikkima]%2C len: 350aa%3Bb|AAC47888.1| (AF015062) dopa decarboxylase [Rothschildia orizaba]%2C len: 350aa gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY19 YP_pCRY20 pCRY20 YP_pCRY20 14615 14908 + hypothetical protein Best Blastp hit %3D gi|16803498|ref|NP_464983.1| (NC_003210) similar to glycyl-tRNA synthetase beta chain [Listeria monocytogenes EGD-e]%2C gi|16410887|emb|CAC99536.1| (AL591979) similar to glycyl-tRNA synthetase beta chain [Listeria monocytogenes]%2C len: 688aa gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY20 YP_pCRY21 pCRY21 YP_pCRY21 15027 15371 + hypothetical protein Best Blastp hit %3D gi|13537129|dbj|BAB40765.1| (AB045141) MTSase [Arthrobacter ramosus]%2C len: 757aa gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY21 YP_pCRY22 pCRY22 YP_pCRY22 15359 17110 + putative mobilization mobB protein Best Blastp hit %3D gi|6523633|emb|CAB62409.1| (AJ224861) mobB [Enterobacter cloacae]%2C len: 653aa%3B match to COG0433%2C Predicted ATPase%2C [General function only]. Contains TRAG protein (Interpro|IPR003688%2C Biological Process: conjugation (sensu Bacteria) (GO:0009291)%2C Cellular Component: membrane (GO:0016020)) gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY22 YP_pCRY23 pCRY23 YP_pCRY23 17107 17874 + putative mobilization protein mobC Best Blastp hit %3D gi|6523634|emb|CAB62410.1| (AJ224861) mobC [Enterobacter cloacae]%2C len: 243aa gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY23 YP_pCRY24 pCRY24 YP_pCRY24 17911 18384 + micrococcal nuclease-like protein Best Blastp hit %3D gi|266681|sp|P29769|NUC_SHIFL Micrococcal nuclease precursor%2C gi|67306|pir||NCEBPX micrococcal nuclease (EC 3.1.31.1) precursor - Shigella flexneri plasmid pSa%2C gi|976155|gb|AAA75246.1| (U30471) nuclease [Plasmid pSa]%2C len: 174aa%3B match to COG1525%2C Micrococcal nuclease (thermonuclease) homologs%2C [DNA replication%2C biogenesis%2C and repair]. Contains Thermonuclease (Interpro|IPR002071%2C Molecular Function: nucleic acid binding (GO:0003676)%2C Molecular Function: nuclease (GO:0004518)). Contains Staphylococcus nuclease (SNase-like) (Interpro|IPR006021%2C Molecular Function: nucleic acid binding (GO:0003676)%2C Molecular Function: nuclease (GO:0004518)) gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY24 YP_pCRY25 pCRY25 YP_pCRY25 18445 18786 + putative membrane prtotein Best Blastp hit %3D gi|15643092|ref|NP_228135.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]%2C gi|7449070|pir||F72389 conserved hypothetical protein - Thermotoga maritima (strain MSB8)%2C gi|4980825|gb|AAD35411.1|AE001714_2 (AE001714) conserved hypothetical protein [Thermotoga maritima]%2C len: 427aa gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY25 YP_pCRY26 pCRY26 YP_pCRY26 18824 19057 - hypothetical protein Best Blastp hit %3D gi|7488598|pir||T14463 galactonolactone dehydrogenase (EC 1.3.2.3) - broccoli%2C gi|2760543|emb|CAB09796.1| (Z97060) L-galactono-1%2C4-lactone dehydrogenase [Brassica oleracea]%2C len: 600aa gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY26 YP_pCRY27 pCRY27 parA parA 19098 19745 - ATPases involved in chromosome partitioning Best Blastp hit %3D gi|14579389|gb|AAK69266.1|AF336309_61 (AF336309) unknown [Yersinia enterocolitica]%2C gi|23630613|gb|AAN37569.1| (AY150843) Orf79 [Yersinia enterocolitica]%2C len: 209aa%3Bref|NP_702921.1| (NC_004319) putative partitioning protein parA [Corynebacterium efficiens]%2C len: 195aa%3B match to COG1192%2C ATPases involved in chromosome partitioning%2C [Cell division and chromosome partitioning] gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY27 YP_pCRY28 pCRY28 mpr mpr 19866 20726 - zinc metalloproteinase Mpr protein Best Blastp hit %3D gi|17530620|ref|NP_511218.1| (NC_003292) Mpr protein [IncN plasmid R46]%2C gi|4335691|gb|AAD17385.1| (U72482) Mpr protein [Plasmid pKM101]%2C gi|17342657|gb|AAL13414.1| (AY046276) Mpr protein [IncN plasmid R46]%2C len: 263aa%3Bontains zinc binding region%3B Contains Neutral zinc metallopeptidases%2C zinc-binding region (Interpro|IPR006025%2C Biological Process: proteolysis and peptidolysis (GO:0006508)%2C Molecular Function: metallopeptidase (GO:0008237)%2C Molecular Function: zinc binding (GO:0008270)) gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY28 YP_pCRY29 pCRY29 hipB2 hipB2 21026 21307 - predicted transcriptional regulator Best Blastp hit %3D gi|9630515|ref|NP_046944.1| (NC_001901) gp48 [Bacteriophage N15]%2C gi|7521555|pir||T13135 protein gp48 - phage N15%2C gi|3192734|gb|AAC19087.1| (AF064539) gp48 [Bacteriophage N15]%2C len: 95aa%3Bref|NP_406944.1| (NC_003143) putative transcriptional regulatory protein [Yersinia pestis]%2C len: 103aa%3B match to COG1396%2C Predicted transcriptional regulators%2C [Transcription 3 recombination]. Contains Helix-turn-helix motif (Interpro|IPR001387%2C Molecular Function: DNA binding (GO:0003677)) gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY29 YP_pCRY30 pCRY30 YP_pCRY30 21241 21600 + putative membrane protein Best Blastp hit %3D gi|22962776|gb|ZP_00010382.1| (NZ_AAAF01000001) hypothetical protein [Rhodopseudomonas palustris]%2C len: 292aa gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pCRY30 YP_pMT001 pMT001 YP_pMT001 87 1109 + putative transposase Best Blastp hit %3D gi|16120587|ref|NP_403900.1| (NC_003143) transposase for insertion sequence IS100 [Yersinia pestis]%2C gi|22123964|ref|NP_66 7387.1| (NC_004088) putative transposase [Yersinia pestis KIM]%2C . . Contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT001 YP_pMT002 pMT002 YP_pMT002 1106 1888 + putative transposase Best Blastp hit %3D gi|16082783|ref|NP_395337.1| (NC_003134) putative transposase [Yersinia pestis]%2C gi|16120383|ref|NP_403696.1| (NC_003143) insertion sequence IS100%2C ATP-binding protein [Yersinia pestis]%2C . . Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: DNA replication origin binding (GO:0003688)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: DNA replication initiation (GO:0006270)%2C Biological Process: regulation of DNA replication (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611). Contains AAA ATPase (Interpro|IPR003593%2C Molecular Function: nucleotide binding (GO:0000166)) gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT002 YP_pMT003 pMT003 YP_pMT003 2018 2626 - phage lambda-related tail assembly protein G Best Blastp hit %3D gi|3883053|gb|AAC82713.1| (AF074611) lambda tail fiber assembly protein G [Yersinia pestis]%2C gi|5834688|emb|CAB55185.1| (AL117211) hypothetical protein YPMT01.03c [Yersinia pestis]%2C . . Contains Protein of unknown function DUF144 (Interpro|IPR003458) gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT003 YP_pMT004 pMT004 YP_pMT004 2719 2931 - hypothetical protein Best Blastp hit %3D gi|7467407|pir||T14969 hypothetical protein Y1052 Yersinia pestis plasmid pMT01%2C gi|6523499| emb|CAB62364.1| (AL117211) hypothetical protein YPMT01.3Ac [Yersinia pestis] gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT004 YP_pMT005 pMT005 YP_pMT005 2928 5864 - phage lambda-related protein Best blastp hit %3D pir||T14968 phage lambda-related protein Yersinia pestis plasmid pMT01 gb|AAC82711.1| (AF074611) lambda hypothetical [Yersinia pestis]%2C . . Contains Antifreeze protein%2C type I (Interpro|IPR000104). Contains Phage tail fiber repeat (Interpro|IPR005003%2C Molecular Function: structural molecule (GO:0005198)). Contains Phage tail fiber repeat 2 (Interpro|IPR005068) gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT005 YP_pMT006 pMT006 YP_pMT006 5897 6529 - hypothetical protein Best Blastp hit %3D pir||T14967 hypothetical protein Y1050 Yersinia pestis plasmid pMT01 gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT006 YP_pMT007 pMT007 YP_pMT007 6532 11169 - phage lambda-related host specificity protein J Best Blastp hit %3D gi|7467447|pir||T14966 phage lambda-related host specificity protein J Yersinia pestis plasmid pMT01%2C gi|3883049|gb|AAC82709.1| (AF074611) lambda host specificity protein J [Yersinia pestis]%2C gi|5834691|emb|CAB55188.1| (AL117211) putative phage tail protein [Yersinia pestis]%3B contains Fibronectin%2C type III (Interpro|IPR003961) gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT007 YP_pMT008 pMT008 YP_pMT008 11185 11772 - putative phage tail protein Best Blastp hit %3D gi|7467406|pir||T14965 hypothetical protein Y1048 Yersinia pestis plasmid pMT01%2C gi|5834692|emb|CAB55189.1| (AL117211) putative phage tail protein [Yersinia pestis] gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT008 YP_pMT009 pMT009 YP_pMT009 11760 12557 - putative phage tail protein Best Blastp hit %3D gi|5834693|emb|CAB55190.1| (AL117211) putative phage tail protein [Yersinia pestis]%2C . similar to ORF Y1047 (EMBL:AF074611) from Y. pestis KIM5 pMT01 (252 aa)%2C TR:O68726 (EMBL:AF053947) from Y. pestis KIM5 pMT01 which have a different putative start codon. . Contains Mov34 family (Interpro|IPR000555). Contains Mov34 family (Interpro|IPR000555) gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT009 YP_pMT010 pMT010 YP_pMT010 12550 13281 - putative phage tail protein Best Blastp hit %3D gi|7444594|pir||T14963 phage lambda-related tail protein L Yersinia pestis plasmid pMT01%2C gi|5834694|emb|CAB55191.1| (AL117211) putative phage tail protein [Yersinia pestis]%3B contains Phage minor tail protein L (Interpro|IPR006487) gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT010 YP_pMT011 pMT011 YP_pMT011 13338 13673 - putative phage tail protein Best Blastp hit %3D gi|18466721|ref|NP_569528.1| (NC_003385) putative phage protein [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|7467442|pir||T14962 lambda phage-related tail protein M Yersinia pestis plasmid pMT01%2C gi|3883045|gb| AAC82705.1| (AF074611) lambda minor tail fiber protein M [Yersinia pestis]%2C gi|5834695|emb|CAB55192.1| (AL117211) putative phage tail protein [Yersinia pestis] gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT011 YP_pMT012 pMT012 YP_pMT012 13715 17956 - putative membrane protein similar to: gi|7467405|pir||T14961 hypothetical protein Y1044 Yersinia pestis plasmid pMT01%2C gi|2996290|gb|AAC13170.1| (AF053947) protein HI1514 homolog [Yersinia pestis]%2C gi|3883044|gb|AAC82704.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834696|emb|CAB55193.1| (AL117211) putative membrane protein [Yersinia pestis] (1525 aa) except for with 112 aa deletion gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT012 YP_pMT013 pMT013 YP_pMT013 17964 18233 - hypothetical protein Best blastp hit %3D gi|18466723|ref|NP_569530.1| (NC_003385) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|7467404|pir||T14959 hypothetical protein Y1043 Yersinia pestis plasmid pMT01%2C gi|5834697|emb|CAB55194.1| (AL117211) hypothetical protein YPMT01.12c [Yersinia pestis]%2C gi|16506039|emb|CAD09925.1| (AL513384) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT013 YP_pMT014 pMT014 YP_pMT014 18314 18631 - hypothetical protein Best Blastp hit %3D gi|18466724|ref|NP_569531.1|(NC_003385) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|7467403|pir||T14958 hypothetical protein Y1042 Yersinia pestis plasmid pMT01%2C gi|5834698|emb|CAB 55195.1| (AL117211) hypothetical protein YPMT01.13c [Yersinia pestis]%2C gi|16506040|emb|CAD09926.1| (AL513384) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT014 YP_pMT015 pMT015 YP_pMT015 18691 19437 - hypothetical protein Best Blastp hit %3D gi|7467402|pir||T14957 hypothetical protein Y1041 Yersinia pestis plasmid pMT01%2C gi|3883041|gb|AAC82701.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834699|emb |CAB55196.1| (AL117211) hypothetical protein YPMT01.14c [Yersinia pestis]%3B contains Bacterial Ig-like%2C group 2 (Interpro|IPR003343) gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT015 YP_pMT016 pMT016 YP_pMT016 19512 19895 - hypothetical protein Best Blastp hit %3D gi|7467401|pir||T14956 hypothetical protein Y1040 Yersinia pestis plasmid pMT01%2C gi|5834700|emb|CAB55197.1| (AL117211) hypothetical protein YPMT01.15c [Yersinia pestis] gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT016 YP_pMT017 pMT017 YP_pMT017 19897 20370 - hypothetical protein Best Blastp hit %3D gi|7467400|pir||T14955 hypothetical protein Y1039 Yersinia pestis plasmid pMT01%2C gi|5834701|emb|CAB55198.1| (AL117211) hypothetical protein YPMT01.16c [Yersinia pestis] gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT017 YP_pMT018 pMT018 YP_pMT018 20361 20819 - hypothetical protein Best Blastp hit %3D gi|18466728|ref|NP_569535.1| (NC_003385) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|7467399|pir||T14954 hypothetical protein Y1038 Yersinia pestis plasmid pMT01%2C gi|5834702|emb|CAB55199.1| (AL117211) hypothetical protein YPMT01.17c [Yersinia pestis] gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT018 YP_pMT019 pMT019 YP_pMT019 20803 21636 - hypothetical protein Best Blastp hit %3D gi|7467397|pir||T14953 hypothetical protein Y1037 Yersinia pestis plasmid pMT01%2C gi|5834703|emb|CAB55200.1| (AL117211) hypothetical protein YPMT01.18c [Yersinia pestis] gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT019 YP_pMT020 pMT020 YP_pMT020 21636 22070 - hypothetical protein Best Blastp hit %3D gi|7467396|pir||T14952 hypothetical protein Y1036 Yersinia pestis plasmid pMT01%2C gi|5834704|emb|CAB55201.1| (AL117211) hypothetical protein YPMT01.19c [Yersinia pestis] gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT020 YP_pMT021 pMT021 YP_pMT021 22114 22776 - hypothetical protein Best Blastp hit %3D gi|7467395|pir||T14951 hypothetical protein Y1035 Yersinia pestis plasmid pMT01%2C gi|5834705|emb|CAB55202.1| (AL117211) hypothetical protein YPMT01.20c [Yersinia pestis]%3B contains Bacterial Ig-like%2C group 2 (Interpro|IPR003343) gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT021 YP_pMT022 pMT022 YP_pMT022 22851 23726 - hypothetical protein Best Blastp hit %3D gi|7467394|pir||T14950 hypothetical protein Y1034 Yersinia pestis plasmid pMT01%2C gi|5834706|emb |CAB55203.1| (AL117211) hypothetical protein YPMT01.21c [Yersinia pestis] gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT022 YP_pMT023 pMT023 YP_pMT023 23753 24649 - hypothetical protein Best Blastp hit %3D gi|18466733|ref| NP_569540.1|(NC_003385) hypothetical protein [Salmonellae nterica subsp. enterica serovar Typhi] gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT023 YP_pMT024 pMT024 YP_pMT024 24672 26261 - hypothetical protein Best Blastp hit %3D gi|7467391|pir||T14947 hypothetical protein Y1031 Yersinia pestis plasmid pMT01%2C gi|5834708|emb|CAB55205.1| (AL117211) hypothetical protein YPMT01.23c [Yersinia pestis] gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT024 YP_pMT025 pMT025 YP_pMT025 26280 27536 - hypothetical protein Best Blastp hit %3D gi|7467390|pir||T14946 hypothetical protein Y1030 Yersinia pestis plasmid pMT01%2C gi|5834709|emb|CAB55206.1| (AL117211) hypothetical protein YPMT01.24c [Yersinia pestis]%3B contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)) gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT025 YP_pMT026 pMT026 YP_pMT026 27539 28180 - hypothetical protein Best Blastp hit %3D gi|7467389|pir||T14945 hypothetical protein Y1029 Yersinia pestis plasmid pMT01%2C gi|3883030|gb|AAC82690.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834710|emb |CAB55207.1| (AL117211) hypothetical protein YPMT01.25c [Yersinia pestis] gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT026 YP_pMT027 pMT027 YP_pMT027 28376 28642 - hypothetical protein Best Blastp hit %3D gi|18466737|ref|NP_569544.1| (NC_003385) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|2996306|gb|AAC13186.1| (AF053947) RGD cell attachment site containing protein [Yersinia pestis]%2C gi|6523500|emb|CAB62365.1| (AL117211) hypothetical protein YPMT01.25Ac [Yersinia pestis]%2C gi|16506053 |emb|CAD09939.1| (AL513384) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT027 YP_pMT028 pMT028 YP_pMT028 28652 29551 - hypothetical protein Best Blastp hit %3D gi|3883028|gb|AAC82688.1|(AF074611) unknown [Yersinia pestis]%2C gi|5834711|emb|CAB55208.1| (AL117211) hypothetical protein YPMT01.26c [Yersinia pestis] gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT028 YP_pMT029 pMT029 YP_pMT029 29548 29802 - hypothetical protein Best Blastp hit %3D gi|3883027|gb|AAC82687.1| (AF074611) unknown [Yersinia pestis]%2C gi|6523501|emb|CAB62366.1| (AL117211) hypothetical protein YPMT01.26Ac [Yersinia pestis] gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT029 YP_pMT030 pMT030 YP_pMT030 29795 30493 - putative ABC transporter ATP-binding protein Best Blastp hit %3D gi|3883026|gb|AAC82686.1| (AF074611) putative ABC transporter [Yersinia pestis]%2C gi|5834712|emb|CAB55209.1| (AL117211) putative ABC transporter ATP-binding protein [Yersinia pestis]%3B contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains Sigma-54 factor interaction domain (Interpro|IPR002078%2C Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)). Contains ABC transporter (Interpro|IPR003439%2C Molecular Function: ATP-binding cassette (ABC) transporter (GO:0004009)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: transport (GO:0006810)%2C Cellular Component: membrane (GO:0016020)). Contains AAA ATPase (Interpro|IPR003593%2C Molecular Function: nucleotide binding (GO:0000166)) gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT030 YP_pMT031 pMT031 YP_pMT031 30430 31131 - hypothetical protein similar to pir||T14940 hypothetical protein Y1024 Yersinia pestis plasmid pMT01%2C gb|AAC82685.1| (AF074611) unknown [Yersinia pestis] (233 aa) and emb|CAB55210.1| (AL117211) hypothetical protein YPMT01.28c [Yersinia pestis] (222 aa) which has a different putative start codon . Contains ParB-like nuclease (Interpro|IPR003115%2C Molecular Function: DNA binding (GO:0003677)%2C Cellular Component: extrachromosomal circular DNA (GO:0005727)) gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT031 YP_pMT032 pMT032 YP_pMT032 31098 31796 - hypothetical protein Best Blastp hit %3D gi|3883024|gb|AAC82684.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834714|emb|CAB55211.1| (AL117211) hypothetical protein YPMT01.29c [Yersinia pestis]%3B contains ParB-like nuclease (Interpro|IPR003115%2C Molecular Function: DNA binding (GO:0003677)%2C Cellular Component: extrachromosomal circular DNA (GO:0005727)) gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT032 YP_pMT033 pMT033 YP_pMT033 31861 33420 + hypothetical protein similar to gi|3883023|gb|AAC82683.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834715|emb|CAB55212.1| (AL117211) hypothetical protein YPMT01.30 [Yersinia pestis]%3B contains DEAD/DEAH box helicase (Interpro|IPR001410%2C Molecular Function: ATP binding (GO:0005524)%2C Molecular Function: ATP dependent helicase (GO:0008026)). Contains Helicase%2C C-terminal (Interpro|IPR001650%2C Molecular Function: nucleic acid binding (GO:0003676)%2C Molecular Function: helicase (GO:0004386)%2C Molecular Function: ATP binding (GO:0005524)) gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT033 YP_pMT034 pMT034 YP_pMT034 33423 33701 + hypothetical protein Best Blastp hit %3D gi|2996313|gb|AAC13193.1| (AF053947) unknown [Yersinia pestis]%2C gi|3883022|gb|AAC82682.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834716|emb| CAB55213.1| (AL117211) hypothetical protein YPMT01.31 [Yersinia pestis] gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT034 YP_pMT035 pMT035 YP_pMT035 33761 34183 + putative lipoprotein Best Blastp hit %3D gi|7467381|pir||T14936 hypothetical protein Y1020 Ye rsinia pestis plasmid pMT01%2C gi|5834717|emb|CAB55214.1| (AL117211) putative lipoprotein [Yersinia pestis] gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT035 YP_pMT036 pMT036 YP_pMT036 34152 34715 + putative transcriptional regulator Best blastp hit %3D pir||T14935 hypothetical protein Y1019 Yersinia pestis plasmid pMT01 gb|AAC82680.1| (AF074611) unknown [Yersinia pestis]. similar to emb|CAB55215.1| (AL117211) putative transcriptional regulator [Yersinia pestis] (175 aa) which has a different putative start codon . Contains Flagellin phase1 repressor (Interpro|IPR003223%2C Molecular Function: transcription factor (GO:0003700)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)) gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT036 YP_pMT037 pMT037 YP_pMT037 35039 35689 + hypothetical protein Best Blastp hit %3D gi|16082818|ref| NP_395372.1|(NC_003134) hypothetical protein YPMT01.34 [Yersinia pestis]%2C gi|7467379|pir||T14934 hypothetical protein Y1018 Yersinia pestis plasmid pMT01%2C gi|2996315|gb|AAC13195. 1| (AF053947) unknown [Yersinia pestis] gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT037 YP_pMT038 pMT038 YP_pMT038 35774 36001 + hypothetical protein Best Blastp hit %3D gi|7467378|pir||T14933 hypothetical protein Y1017 Yersinia pestis plasmid pMT01%2C gi|6523502|emb|CAB62367.1| (AL117211) hypothetical protein YPMT01.34A [Yersinia pestis] gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT038 YP_pMT039 pMT039 YP_pMT039 36302 36660 + Similar to hypothetical protein Y1016 from Yersinia pestis plasmid pMT01 gb|AAC82677.1| (AF074611). But this CDS has been disrupted by a C deletion at position 36532 and lead to frameshift gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT039 YP_pMT040 pMT040 YP_pMT040 36639 37121 - hypothetical protein Best Blastp hit %3D gi|7467376|pir||T14931 hypothetical protein Y1015 Yersinia pestis plasmid pMT01%2C gi|5834720|emb |CAB55217.1| (AL117211) hypothetical protein YPMT01.35c [Yersinia pestis] gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT040 YP_pMT041 pMT041 YP_pMT041 37134 37367 - hypothetical protein Best Blastp hit %3D gi|7467375|pir||T14930 hypothetical protein Y1013 Yersinia pestis plasmid pMT01 gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT041 YP_pMT042 pMT042 YP_pMT042 37327 37677 - ABC-type transport protein uup homolog Best Blastp hit %3D pir||T14929 ABC-type transport protein uup homolog Yersinia pestis plasmid pMT01%2C gb|AAC82674.1| (AF074611) unknown [Yersinia pestis]. similar to emb|CAB55218.1| (AL117211) hypothetical protein [Yersinia pestis] (95 aa) which has a different putative start codon gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT042 YP_pMT043 pMT043 tnp tnp 37808 38266 - putative transposase Best Blastp hit %3D gi|22124058|ref| NP_667481.1| (NC_004088) putative transposase [Yersinia pestis KIM]%3B contains Transposase IS200-like (Interpro|IPR002686) gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT043 YP_pMT044 pMT044 YP_pMT044 38505 38816 - hypothetical protein Best Blastp hit %3D gi|18466785|ref| NP_569592.1| (NC_003385) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT044 YP_pMT045 pMT045 YP_pMT045 38813 39301 - hypothetical protein Best Blastp hit %3D gi|18466785|ref| NP_569592.1|(NC_003385) hypothetical protein [Salmonellae nterica subsp. enterica serovar Typhi]%2C gi|16506101|emb|CAD09987.1| (AL513384) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT045 YP_pMT046 pMT046 YP_pMT046 39458 40600 - putative ribonucleoside-diphosphate reductase beta subunit Best Blastp hit %3D gi|18466786|ref| NP_569593.1| (NC_003385) putative ribonucleoside-diphosphate reductase beta subunit [Salmonella enterica subsp. enterica serovarTyphi] gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT046 YP_pMT047 pMT047 YP_pMT047 40708 43023 - putative ribonucleoside-diphosphate reductase alpha subunit Best Blastp hit %3D gi|18466787|ref| NP_569594.1| (NC_003385) putative ribonucleoside-diphosphate reductase alpha subunit [Salmonella enterica subsp. enterica serovar Typhi]%3B contains Ribonucleotide reductase large subunit (Interpro|IPR000788%2C Molecular Function: ribonucleoside-diphosphate reductase (GO:0004748)%2C Cellular Component: ribonucleoside-diphosphate reductase complex (GO:0005971)%2C Biological Process: DNA replication (GO:0006260)). Contains Ribonucleotide reductase large subunit (Interpro|IPR000788%2C Molecular Function: ribonucleoside-diphosphate reductase (GO:0004748)%2C Cellular Component: ribonucleoside-diphosphate reductase complex (GO:0005971)%2C Biological Process: DNA replication (GO:0006260)) gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT047 YP_pMT048 pMT048 YP_pMT048 43101 43670 - hypothetical protein Best Blastp hit %3D gi|7467374|pir||T14927 hypothetical protein Y1010 Yersinia pestis plasmid pMT01%2C gi|5834723|emb|CAB55220.1| (AL117211) hypothetical protein YPMT01.38c [Yersinia pestis] gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT048 YP_pMT049 pMT049 YP_pMT049 43683 44429 - hypothetical protein Best Blastp hit %3D gi|5834724|emb|CAB55221.1| (AL117211) hypothetical protein YPMT01.39c [Yersinia pestis] gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT049 YP_pMT050 pMT050 YP_pMT050 44419 46347 - putative exonuclease subunit 2 Best Blastp hit %3D pir||T14925 probable exonuclease Yersinia pestis plasmid pMT01 gb|AAC82670.1| (AF074611) putative exonuclease [Yersinia pestis]%3B similar to emb|CAB55222.1| (AL117211) putative exonuclease subunit 2 [Yersinia pestis] (638 aa) which has a different putative start codon . Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains ABC transporter (Interpro|IPR003439%2C Molecular Function: ATP-binding cassette (ABC) transporter (GO:0004009)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: transport (GO:0006810)%2C Cellular Component: membrane (GO:0016020)) gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT050 YP_pMT051 pMT051 YP_pMT051 46344 46568 - hypothetical protein similar to YPMT01.40Ac hypothetical protein (EMBL:AL117211) from Yersinia pestis CO92 pMT01 (74 aa)%3B similar to part of ORF Y1007 (EMBL:AF074611) from Y. pestis KIM5 pMT01 (88 aa)%2C which has a different putative start codon gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT051 YP_pMT052 pMT052 YP_pMT052 46565 47650 - putative exonuclease subunit 1 Best Blastp hit %3D gi|7467372|pir||T14923 hypothetical protein Y1006 Yersinia pestis plasmid pMT01%2C gi|5834726|emb|CAB55223.1| (AL117211) putative exonuclease subunit 1 [Yersinia pestis]%3B contains Metallo-phosphoesterase (Interpro|IPR004843%2C Molecular Function: hydrolase (GO:0016787)) gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT052 YP_pMT053 pMT053 YP_pMT053 47897 48169 + hypothetical protein Best Blastp hit %3D pir||T14922 hypothetical protein Y1005 Yersinia pestis plasmid pMT01 gb|AAC82667.1| (AF074611) unknown [Yersinia pestis] gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT053 YP_pMT054 pMT054 YP_pMT054 48066 49088 + putative periplasmic protein Best Blastp hit %3D gi|3883006|gb|AAC82666.1|(AF074611) hypothetical lipoprotein [Yersinia pestis]%2C gi|5834727|emb|CAB55224.1| (AL117211) putative periplasmic protein [ Yersinia pestis]%3B contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C Molecular Function: transporter (GO:0005215)%2C Biological Process: transport (GO:0006810)%2C Cellular Component: periplasmic space (sensu Gram-negative Bacteria) (GO:0030288)). Contains Bacterial extracellular solute-binding protein%2C family 3 (Interpro|IPR001638%2C Molecular Function: transporter (GO:0005215)%2C Biological Process: transport (GO:0006810)%2C Cellular Component: periplasmic space (sensu Gram-negative Bacteria) (GO:0030288)) gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT054 YP_pMT055 pMT055 YP_pMT055 49226 49372 - hypothetical protein Best Blastp hit %3D gi|16082829|ref| NP_395383.1|(NC_003134) hypothetical protein YPMT01.42Ac [Yersinia pestis] gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT055 YP_pMT056 pMT056 YP_pMT056 49448 50112 - similar to hypothetical protein YPMT01.43c (EMBL:AL117211) from Yersinia pestis CO92 and to ORF Y1002 (EMBL:AF074611) from Y. pestis KIM5 pMT01 (214 aa). This CDS has been disrupted by a 20 bps fragment insertion gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT056 YP_pMT057 pMT057 repA repA 50857 51921 + putative replication protein A Best Blastp hit %3D gi|2996323|gb|AAC13203.1| (AF053947) RepA homolog [Yersinia pestis]%2C gi|3883004|gb|AAC82664.1| (AF074611) replication protein A [Yersinia pestis]%2C gi|5834729|emb|CAB55226.1| (AL117211) putative replication protein A [Yersinia pestis]%3B contains Initiator RepB protein (Interpro|IPR000525%2C Molecular Function: DNA-directed DNA polymerase (GO:0003887)%2C Cellular Component: extrachromosomal circular DNA (GO:0005727)%2C Biological Process: DNA replication initiation (GO:0006270)). Contains RepA protein (Interpro|IPR002584%2C Molecular Function: DNA binding (GO:0003677)%2C Cellular Component: extrachromosomal circular DNA (GO:0005727)%2C Biological Process: DNA replication (GO:0006260)) gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT057 YP_pMT058 pMT058 YP_pMT058 52490 52705 - hypothetical protein Best Blastp hit %3D gi|16082832|ref| NP_395386.1|(NC_003134) hypothetical protein YPMT01.45c [Yersinia pestis]%2C gi|3883117|gb|AAC82777.1|(AF074611) hypothetical regulator [Yersinia pestis] gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT058 YP_pMT059 pMT059 YP_pMT059 52702 53037 - hypothetical protein Best Blastp hit %3D gi|7467439|pir||T15033 hypothetical protein Y1118 Yersinia pestis plasmid pMT01%2C gi|5834731|emb|CAB55228.1| (AL117211) hypothetical protein YPMT01.46c [Yersinia pestis] gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT059 YP_pMT060 pMT060 YP_pMT060 53034 53213 - hypothetical protein Best Blastp hit %3D gi|6523505|emb|CAB62370.1| (AL117211) hypothetical protein YPMT01.46Ac [Yersinia pestis] gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT060 YP_pMT061 pMT061 YP_pMT061 53254 53529 - hypothetical protein Best Blastp hit %3D gi|7467438|pir||T15032 hypothetical protein Y1117 Yersinia pestis plasmid pMT01%2C gi|6523506|emb|CAB62371.1| (AL117211) hypothetical protein YPMT01.46Bc[Yersinia pestis] gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT061 YP_pMT062 pMT062 YP_pMT062 53597 54007 - hypothetical protein Best Blastp hit %3D gi|7467437|pir||T15031 hypothetical protein Y1116 Yersinia pestis plasmid pMT01%2C gi|5834732|emb|CAB55229.1| (AL117211) hypothetical protein YPMT01.47c [Yersinia pestis] gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT062 YP_pMT063 pMT063 YP_pMT063 53991 54362 - hypothetical protein Best Blastp hit %3D gi|7467436|pir||T15030 hypothetical protein Y1115- Yersinia pestis plasmid pMT01%2C gi|5834733|emb|CAB55230.1| (AL117211) hypothetical protein YPMT01.48c [Yersinia pestis] gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT063 YP_pMT064 pMT064 YP_pMT064 54516 55346 - putative lipoprotein Best Blastp hit %3D gi|7467462|pir||T15029 probable serine proteinase Yersinia pestis plasmid pMT01%2C gi|5834734| emb|CAB55231.1| (AL117211) putative lipoprotein [Yersinia pestis]%3B contains Band 7 protein (Interpro|IPR001107) gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT064 YP_pMT065 pMT065 YP_pMT065 55350 55550 - hypothetical protein Best Blastp hit %3D gi|6523507|emb|CAB62372.1| (AL117211) hypothetical protein YPMT01.49Ac [Yersinia pestis] gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT065 YP_pMT066 pMT066 YP_pMT066 55641 56717 - putative recombinase Best Blastp hit %3D gi|16082840|ref| NP_395394.1| (NC_003134) putative recombinase [Yersinia pestis]%3B contains RecA bacterial DNA recombination protein (Interpro|IPR001553%2C Molecular Function: damaged DNA binding (GO:0003684)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: DNA repair (GO:0006281)%2C Biological Process: DNA recombination (GO:0006310)%2C Molecular Function: DNA dependent adenosinetriphosphatase (GO:0008094)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)) gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT066 YP_pMT067 pMT067 YP_pMT067 56720 56986 - hypothetical protein Best Blastp hit %3D gi|16082841|ref| NP_395395.1|(NC_003134) hypothetical protein YPMT01.50Ac [Yersinia pestis]%2C gi|18466674|ref|NP_569481.1| (NC_003385) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]%2C gi|7467435|pir||T15027 hypothetical protein Y1112 Yersinia pestis plasmidpMT01%2C gi|6523508|emb|CAB623 73.1| (AL117211) hypothetical protein YPMT01.50Ac [Yersinia pestis] gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT067 YP_pMT068 pMT068 YP_pMT068 56986 57930 - hypothetical protein Best Blastp hit %3D pir||T15026 hypothetical protein Y1111 Yersinia pestis plasmid pMT01%3B contains 5'3'-Exonuclease N- and I-domain (Interpro|IPR000513%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: nuclease (GO:0004518)). Contains 5'-3' exonuclease (Interpro|IPR002421%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: 5'-3' exonuclease (GO:0008409)). Contains Helix-hairpin-helix DNA-binding%2C class 2 (Interpro|IPR003584%2C Molecular Function: DNA binding (GO:0003677)%2C Cellular Component: intracellular (GO:0005622)) gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT068 YP_pMT069 pMT069 YP_pMT069 57991 59019 - hypothetical protein Best Blastp hit %3D gi|7467444|pir||T14695 P2 protein homolog Yersinia pestis plasmid pMT01%2C gi|2996330|gb|AAC13210.1| (AF053947) P2 protein homolog [Yersinia pestis]%2C gi|5834737|emb| CAB55234.1| (AL117211) hypothetical protein YPMT01.52c [Yers inia pestis]%3B contains Antifreeze protein%2C type I (Interpro|IPR000104) gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT069 YP_pMT070 pMT070 YP_pMT070 59139 59612 - hypothetical protein Best Blastp hit %3D gi|5834738|emb|CAB55235.1| (AL117211) hypothetical protein YPMT01.53c [Yersinia pestis] gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT070 YP_pMT071 pMT071 YP_pMT071 60115 60678 + hypothetical protein Best Blastp hit %3D gi|7452165|pir||T15023 hypothetical protein Y1108- Yersinia pestis plasmid pMT01%2C gi|3883106|gb|AAC82766.1| (AF074611)unknown [Yersinia pestis]%2C gi|5834739|emb| CAB55236.1| (AL117211) hypothetical protein YPMT01.54 [Yersinia pestis] gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT071 YP_pMT072 pMT072 YP_pMT072 60708 61151 - hypothetical protein Best Blastp hit %3D gi|7452164|pir||T15022 hypothetical protein Y1107 Yersinia pestis plasmid pMT01%2C gi|3883105|gb|AAC82765.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834740|emb |CAB55237.1| (AL117211) hypothetical protein YPMT01.55c [Yersinia pestis] gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT072 YP_pMT073 pMT073 YP_pMT073 61148 66631 - probable DNA polymerase III%2C similar to DNA polymerase III%2C alpha subunit%2C gb|AAC82764.1| (AF074611) Y1106 from Yersinia pestis KIM plasmid pMT01 (1174 aa). This CDS has been disrupted by IS100 element. Contains Uracil-DNA glycosylase superfamily (Interpro|IPR005122). Contains PHP domain C-terminal region (Interpro|IPR004013). Contains DNA polymerase III alpha subunit (Interpro|IPR004805%2C Molecular Function: alpha DNA polymerase (GO:0003889)%2C Cellular Component: cytoplasm (GO:0005737)%2C Biological Process: DNA replication (GO:0006260)%2C Molecular Function: 3'-5' exonuclease (GO:0008408)) gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT073 YP_pMT074 pMT074 YP_pMT074 62062 63084 + putative transposase Best Blastp hit %3D gi|16082680|ref|NP_395227.1| (NC_003132) putative transposase [Yersinia pestis]%2C gi|16082692|ref|NP_395138.1| (NC_003131) putative transposase [Yersinia pestis]%2C gi|16082782|ref|NP_395336.1|(NC_003134) putative transposase [Yersinia pestis]%2C gi|22123964|ref|NP_667387.1|(NC_004088) putative transposase [Yersinia pestisKIM]%2C gi|7467467|pir||T14972 probable transposasea Yersinia pestis plasmid pMT01%2C gi|1655837|gb|AAC44981.1| (U59875) ORFA%3B putative transposase [Yersinia pestis]%2C gi|2996223|gb|AAC62546.1| (AF053946) transposase [Yersinia pestis]%2C gi|299 6288| gb|AAC13168.1| (AF053947) putative transposase [Yersinia pestis]%3B contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT074 YP_pMT075 pMT075 YP_pMT075 63081 63863 + putative transposase ATP-binding protein Best Blastp hit %3D gi|10955428|ref|NP_053140.1| (NC_002142) orf78 [Escherichia coli]%2C gi|160826 81|ref|NP_395228.1| (NC_003132) putative ATP-binding protein [Yersinia pestis]%2C gi|16082783|ref|NP_395337.1| (NC_003134) putative transposase [Yersinia pestis]%2C gi|16120383|ref|NP_403696.1| (NC_003143) insertion sequence IS100%2C ATP-binding protein [Yersinia pestis]%2C gi|22123963|ref|NP_667386.1| (NC_004088) putative transposase [Yersinia pestis KIM]%2C gi|7443 684|pir||T14971 probable transposase Yersinia pestis plasmid pMT01 and pCD1 insertion sequence%2C gi|3822050|gb|AAC69770.1| (AF074612) putative transposase [Yersinia pestis]%3B contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: DNA replica gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT075 YP_pMT076 pMT076 YP_pMT076 66812 68047 - putative porphyrin biosynthetic protein Best Blastp hit %3D gi|7467459|pir||T15020 probable porphyrin biosynthetic enzyme Yersinia pestis plasmid pMT01%2C gi|2996336|gb|AAC13216.1| (AF053947) CobS homolog [Yersinia pestis]%2C gi|3883103|gb|AAC82763.1| (AF074611) putative porphyrin biosynthetic enzyme [Yersinia pestis]%2C gi|5834771|emb|CAB55270.1| (AL117211) putative porphyrin biosynthetic protein [Yersinia pestis]%3B contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)) gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT076 YP_pMT077 pMT077 YP_pMT077 68144 70510 - putative porphyrin biosynthetic protein Best Blastp hit %3D gi|3883102|gb|AAC82762.1| (AF074611) putative porphyrin biosynthetic enzyme [Yersinia pestis]%2C gi|5834770|emb|CAB55269.1 | (AL117211) putative porphyrin biosynthetic protein [Yersinia pestis] gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT077 YP_pMT078 pMT078 YP_pMT078 70620 70832 - hypothetical protein Best Blastp hit %3D gi|6523512|emb|CAB62377.1| (AL117211) hypothetical protein YPMT01.86A [Yersinia pestis] gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT078 YP_pMT079 pMT079 YP_pMT079 70671 70940 + hypothetical protein Best Blastp hit %3D gi|7467432|pir||T15018 hypothetical protein Y1103 Yersinia pestis plasmid pMT01 gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT079 YP_pMT080 pMT080 YP_pMT080 71095 71481 + hypothetical protein Best Blastp hit %3D gi|7467431|pir||T15017 hypothetical protein Y1102 Yersinia pestis plasmid pMT01%2C gi|5834769| emb|CAB55268.1| (AL117211) hypothetical protein YPMT01.86c [Yersinia pestis] gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT080 YP_pMT081 pMT081 YP_pMT081 71476 72654 - putative integrase Best Blastp hit %3D gi|7467430|pir||T15016 hypothetical protein Y1101-Yersinia pestis plasmid pMT01%2C gi|5834768|emb|CAB55267.1| (AL117211) putative integrase [Yersinia pestis]%3B contains Phage integrase (Interpro|IPR002104%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)%2C Biological Process: DNA integration (GO:0015074)) gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT081 YP_pMT082 pMT082 caf1 caf1 73340 73852 - F1 capsule antigen Best Blastp hit %3D gi|115437|sp|P26948|CAF1_YERPE F1 capsule antigen precursor%2C gi|96993|pir||S13008 capsular antigen F1 precursor Yersinia pestis plasmid pMT01%2C gi|48621|emb|CAA43966.1| (X61996) F1 capsule antigen [Yersinia pestis]%2C gi|2996338| gb|AAC13218.1| (AF053947) F1 capsule antigen [Yersinia pestis]%2C gi|3883098|gb|AAC82758.1| (AF074611) F1 capsule antigen [Yersinia pestis]%2C gi|5834767|emb|CAB55266.1| (AL117211) putative F1 capsule antigen [Yersinia pestis] gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT082 YP_pMT083 pMT083 caf1A caf1A 73933 76434 - putative F1 capsule anchoring protein Best Blastp hit %3D gi|17380417|sp|P26949|CAFA_YERPE F1 capsule anchoring protein precursor%2C gi|7442946|pir||T14703 F1 capsule anchoring protein Yersinia pestis plasmid pMT01%2C gi|2996339|gb|AAC13219.1| (AF053947) F1 capsule anchoring protein [Yersinia pestis]%2C gi|5834766|emb|CAB55265.1| (AL117211) putative F1 capsule anchoring protein [Yersinia pestis] . Contains Fimbrial biogenesis outer membrane usher protein (Interpro|IPR000015%2C Molecular Function: transporter (GO:0005215)%2C Biological Process: transport (GO:0006810)%2C Cellular Component: membrane (GO:0016020)) gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT083 YP_pMT084 pMT084 caf1M caf1M 76459 77268 - putative F1 chaperone protein Best Blastp hit %3D pir||T15013 F1 capsule protein Yersinia pestis plasmid pMT01 gb|AAC82756.1| (AF074611) F1 capsule [Yersinia pestis]. Indentical to putative F1 chaperone protein from Yersinia pestis plasmid pMT01 ref|NP_395428.1| (NC_003134) putative F1 chaperone protein [Yersinia pestis] and gb|AAC13220.1| (AF053947) Caf1M [Yersinia pestis] (258 aa) (100 indentity in 258 aa overlap) which has a different putative start codon . Contains Bacterial pili assembly chaperone (Interpro|IPR001829%2C Molecular Function: chaperone (GO:0003754)%2C Biological Process: cell wall organization and biogenesis (GO:0007047)%2C Cellular Component: periplasmic space (sensu Gram-negative Bacteria) (GO:0030288)) gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT084 YP_pMT085 pMT085 caf1R caf1R 77545 78468 + putative F1 operon positive regulatory protein Best Blastp hit %3D gi|3883095|gb|AAC82755.1| (AF074611) F1 capsule positive regulator [Yersinia pestis]%2C gi|5834764|emb|CAB55263.1| (AL117211) putative F1 operon positive regulatory protein [Yersinia pestis]%3B contains Helix-turn-helix%2C AraC type (Interpro|IPR000005%2C Molecular Function: transcription factor (GO:0003700)%2C Cellular Component: intracellular (GO:0005622)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)) gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT085 YP_pMT086 pMT086 YP_pMT086 78983 79288 - putative C-type natriuretic protein Best Blastp hit %3D gb|AAC82754.1| (AF074611) putative C-type natriuretic protein [Yersinia pestis] gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT086 YP_pMT087 pMT087 YP_pMT087 79285 79437 - hypothetical protein Best Blastp hit %3D gi|18466697|ref| NP_569504.1|(NC_003385) hypothetical protein [Salmonellae nterica subsp. enterica serovar Typhi] gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT087 YP_pMT088 pMT088 YP_pMT088 79434 79649 - hypothetical protein Best Blastp hit %3D gi|18466698|ref| NP_569505.1| (NC_003385) hypothetical protein [Salmonellae nterica subsp. enterica serovar Typhi] gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT088 YP_pMT089 pMT089 YP_pMT089 79633 79809 - hypothetical protein Best Blastp hit %3D gi|18466699|ref| NP_569506.1| (NC_003385) hypothetical protein [Salmonellae nterica subsp. enterica serovar Typhi] gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT089 YP_pMT090 pMT090 YP_pMT090 79809 81131 - putative DNA ligase Best Blastp hit %3D gi|18466700|ref| NP_569507.1| (NC_003385) putative DNA ligase [Salmonella enterica subsp. enterica serovar Typhi]%3B contains ATP-dependent DNA ligase (Interpro|IPR000977%2C Molecular Function: DNA ligase (ATP) (GO:0003910)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: DNA replication (GO:0006260)%2C Biological Process: DNA repair (GO:0006281)%2C Biological Process: DNA recombination (GO:0006310)) gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT090 YP_pMT091 pMT091 YP_pMT091 81134 81388 + hypothetical protein Best Blastp hit %3D gi|7467329|pir||T14974 heavy-metal transporting CPx-type ATPase homolog Yersinia pestis plasmid pMT01 gi|3883057|gb|AAC82717.1| unknown [Yersinia pestis] gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT091 YP_pMT092 pMT092 YP_pMT092 81166 81642 - hypothetical protein Best Blastp hit %3D gi|AAC82718|pir||T14975 hypothetical protein Y1058 Yersinia pestis plasmid pMT01 gb|AAC82718.1| (AF074611) unknown [Yersinia pestis] gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT092 YP_pMT093 pMT093 YP_pMT093 81334 81675 + hypothetical protein Best Blastp hit %3D gi|7467409|pir||T14976 hypothetical protein Y1059 Yersinia pestis plasmid pMT01 gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT093 YP_pMT094 pMT094 YP_pMT094 81724 81915 - similar to the C-terminus of hypothetical protein Y1060 Yersinia pestis plasmid pMT01 gb|AAC82720.1| (AF074611) unknown [Yersinia pestis] (264 aa). This CDS has been disrputed by IS100 element and the C-terminal residues locates in 106035 to 106640 (pMT127). The rearrangement has been confirmed. gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT094 YP_pMT095 pMT095 YP_pMT095 81982 82764 - ATP-binding protein Best Blastp hit %3D gi|10955428|ref| NP_053140.1| (NC_002142) orf78 [Escherichia coli]%2C gi|16082681| ref|NP_395228.1| (NC_003132) putative ATP-binding protein [Yersinia pestis]%2C gi|16120383|ref|NP_403696.1|(NC_003143) insertion sequence IS100%2C ATP-binding protein [Yersinia pestis]%2C gi|221 23963|ref|NP_667386.1| (NC_004088) putative transposase [Yersinia pestis KIM]%3B contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: DNA replication origin binding (GO:0003688)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: DNA replication initiation (GO:0006270)%2C Biological Process: regulation of DNA replication (GO:0006275)). Contains IstB-like ATP-binding protein (Interpro|IPR002611 gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT095 YP_pMT096 pMT096 YP_pMT096 82761 83783 - transposase Best Blastp hit %3D gi|16120384|ref|NP_403697.1| (NC_003143) transposa se for insertion sequence IS100 [Yersinia pestis]%2C gi|22123964|ref|NP_667387.1| (NC_004088) putative transposase [Yersinia pestis KIM]%2C gi|5834686|emb|CAB55183.1| (AL117211) putative transposase [Yersinia pestis]%2C gi|8571120|gb|AAF76753.1|AF218073_1 (AF218073) putative transposase [Escherichia coli]%3B contains Integrase%2C catalytic domain (Interpro|IPR001584%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA recombination (GO:0006310)). Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT096 YP_pMT097 pMT097 YP_pMT097 83907 85916 - putative DNA-binding protein Best Blastp hit %3D gi|7467428|pir||T14725 hypothetical protein Y1092 Yersinia pestis plasmid pMT01%2C gi|2996364|gb|AAC13244.1| (AF053947) unknown [Yersinia pestis]%2C gi|5834743|emb|CAB55241.1| (AL117211) putative DNA-binding protein [Yersinia pestis]%3B contains ParB-like nuclease (Interpro|IPR003115%2C Molecular Function: DNA binding (GO:0003677)%2C Cellular Component: extrachromosomal circular DNA (GO:0005727)) gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT097 YP_pMT098 pMT098 YP_pMT098 85989 86219 - hypothetical protein Best Blastp hit %3D gi|7467427|pir||T14724 hypothetical protein Y1091-Yersinia pestis plasmid pMT01%2C gi|5834744|emb |CAB55242.1| (AL117211) hypothetical protein YPMT01.60c [Yersinia pestis] gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT098 YP_pMT099 pMT099 YP_pMT099 86645 86878 + hypothetical protein contains Pollen allergen Poa pIX/Phl pVI%2C C-terminal (Interpro|IPR001778) gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT099 YP_pMT100 pMT100 YP_pMT100 87008 87514 - putative antirestriction protein Best Blastp hit %3D gi|7467320|pir||T14723 antirestriction protein homolog Yersinia pestis plasmid pMT01%2C gi|2996361|gb|AAC13241.1| (AF053947) antirestriction protein homolog [Yersinia pestis]%2C gi|5834745|emb|CAB55243.1| (AL117211) putative antirestriction protein [Yersinia pestis] gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT100 YP_pMT101 pMT101 YP_pMT101 87722 88072 + hypothetical protein Best Blastp hit %3D gi|7467426|pir||T15004 hypothetical protein Y1089 Yersinia pestis plasmid pMT01 gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT101 YP_pMT102 pMT102 YP_pMT102 87913 88692 - hypothetical protein Best Blastp hit %3D gi|7467425|pir||T14722 hypothetical protein Y1088 Yersinia pestis plasmid pMT01%2C gi|3883086|gb|AAC82746.1| (AF074611) unknown [Yersinia pestis]%2C gi|5834746|emb |CAB55244.1| (AL117211) hypothetical protein YPMT01.62c [Yersinia pestis] gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT102 YP_pMT103 pMT103 YP_pMT103 88746 89237 - hypothetical protein Best Blastp hit %3D gi:5834747 emb|CAB55245.1| (AL117211) hypothetical protein YPMT01.63c [Yersinia pestis] gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT103 YP_pMT104 pMT104 YP_pMT104 89176 89397 - hypothetical protein Best Blastp hit %3D gi|7467423|pir||T15001 hypothetical protein Y1086-Yersinia pestis plasmid pMT01%2C gi|6523509|emb|CAB62374.1| (AL117211) hypothetical protein YPMT01.63Ac [Yersinia pestis] gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT104 YP_pMT105 pMT105 YP_pMT105 89397 90074 - putative DNA methylase Best Blastp hit %3D gi|16082855|ref| NP_395409.1| (NC_003134) putative DNA methylase [Yersinia pestis]%2C gi|7467455|pir||T15000 probable hemagglutinin-associ ated protein Yersinia pestis plasmid pMT01%2C gi|3883083|gb|AAC82743.1| (AF074611) unknown [Yersinia pestis]%3B contains Site-specific DNA-methyltransferase (cytosine-N4-specific) (Interpro|IPR001091%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA methylation (GO:0006306)%2C Molecular Function: N-methyltransferase (GO:0008170)). Contains N-6 Adenine-specific DNA methylase (Interpro|IPR002052%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA methylation (GO:0006306)%2C Molecular Function: N-methyltransferase (GO:0008170)). Contains N6 adenine-specific DNA methyltransferase%2C D21 class (Interpro|IPR002295%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: DNA methylation (GO:0006306)%2C Molecular Function: N-methyltransferase (GO:0008170)). Contains DNA methylase N-4/N- gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT105 YP_pMT106 pMT106 YP_pMT106 89694 90221 + hypothetical protein Best Blastp hit %3D gi|7452163|pir||T14999 hypothetical protein Y1084 Yersinia pestis plasmid pMT01 gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT106 YP_pMT107 pMT107 YP_pMT107 90322 90762 - hypothetical protein contains ProfileScan match to entry: PS50324 (SER_RICH) from aa 26-74%2C score%3D 9.520 gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT107 YP_pMT108 pMT108 YP_pMT108 90467 90775 + hypothetical protein Best Blastp hit %3D gi|7467422|pir||T14998 hypothetical protein Y1083 Yersinia pestis plasmid pMT01%2C gi|5834749|emb|CAB5 5247.1| (AL117211) hypothetical protein YPMT01.65 [Yersinia pestis] gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT108 YP_pMT109 pMT109 YP_pMT109 90937 92334 - putative DNA-binding protein Best Blastp hit %3D gi|7467421|pir||T14997 hypothetical protein Y1080 Yersinia pestis plasmid pMT01%2C gi|5834750|emb|CAB55248.1| (AL117211) putative DNA-binding protein [Yersinia pestis]%3B contains Uridine kinase (Interpro|IPR000764%2C Molecular Function: uridine kinase (GO:0004849)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: uridine kinase reaction (GO:0006224)). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains AAA ATPase (Interpro|IPR003593%2C Molecular Function: nucleotide binding (GO:0000166)) gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT109 YP_pMT110 pMT110 YP_pMT110 92430 92576 + hypothetical protein Best Blastp hit %3D gi|3883079|pir||T14996 hypothetical protein Y1079 Yersinia pestis plasmid pMT01 gb|AAC82739.1| (AF074611) unknown [Yersinia pestis] gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT110 YP_pMT111 pMT111 YP_pMT111 92573 92806 + hypothetical protein Best Blastp hit %3D gi|7467419|pir||T14995 hypothetical protein Y1078 Yersinia pestis plasmid pMT01 gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT111 YP_pMT112 pMT112 parB parB 92713 93684 - putative partitioning protein B Best Blastp hit %3D gi|7444201|pir||T14719 partitioning protein B Yersinia pestis plasmid pMT01%2C gi|2996357|gb|AAC13237.1| (AF053947) ParB homolog [Yersinia pestis]%2C gi|5834751|emb|CAB55249.1| (AL117211) putative partitioning protein B [Yersinia pestis] . Contains ParB-like nuclease (Interpro|IPR003115%2C Molecular Function: DNA binding (GO:0003677)%2C Cellular Component: extrachromosomal circular DNA (GO:0005727)). Contains ParB-like partition protein (Interpro|IPR004437%2C Molecular Function: DNA binding (GO:0003677)%2C Biological Process: plasmid partitioning (sensu Bacteria) (GO:0030542)) gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT112 YP_pMT113 pMT113 parA parA 93681 94955 - putative partitioning protein A Best Blastp hit %3D gi3883076 pir||T14993 partitioning protein A Yersinia pestis plasmid pMT01 gb|AAC82736.1| (AF074611) partitioning protein [Yersinia pestis]. similar to putative partitioning protein A from Yersinia pestis plasmid pMT01 emb|CAB55250.1| (AL117211) putative partitioning protein A [Yersinia pestis] (401 aa) (100 indentity in 401 aa overlap) which has a different putative start codons . Contains ATPase%2C ParA type (Interpro|IPR000707) gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT113 YP_pMT114 pMT114 YP_pMT114 95170 95415 + hypothetical protein Best Blastp hit %3D gi|3883075| pir||T14992 hypothetical protein Y1075 Yersinia pestis plasmid pMT01 gb|AAC82735.1| (AF074611) unknown [Yersinia pestis]. similar to emb|CAB62375.1| (AL117211) hypothetical protein [Yersinia pestis] (75 aa) which has a different putative start codon gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT114 YP_pMT115 pMT115 YP_pMT115 95415 95741 + hypothetical protein Best Blastp hit %3D gi|7467417|pir||T14991 hypothetical protein Y1074 Yersinia pestis plasmid pMT01%2C gi|5834753|emb|CAB55251.1| (AL117211) hypothetical protein YPMT01.69 [Yersinia pestis] gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT115 YP_pMT116 pMT116 YP_pMT116 95941 96561 + putative resolvase Best Blastp hit %3D gi|7467461|pir||T14990 probable resolvase Yersinia pestis plasmid pMT01%2C gi|5834754|emb|CAB55252.1| (AL117211) putative resolvase [Yersinia pestis]%3B contains Bacterial regulatory protein LacI%2C HTH motif (Interpro|IPR000843%2C Molecular Function: transcription factor (GO:0003700)%2C Cellular Component: intracellular (GO:0005622)%2C Biological Process: regulation of transcription%2C DNA-dependent (GO:0006355)). Contains Site-specific recombinase (Interpro|IPR006118%2C Molecular Function: recombinase (GO:0000150)%2C Biological Process: DNA recombination (GO:0006310)). Contains Resolvase%2C N-terminal (Interpro|IPR006119%2C Molecular Function: recombinase (GO:0000150)%2C Biological Process: DNA recombination (GO:0006310)) gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT116 YP_pMT117 pMT117 YP_pMT117 96582 97568 + hypothetical protein Best Blastp hit %3D gi|7467466|pir||T14989 probable transposase Yersinia pestis plasmid pMT01%2C gi|5834755|emb|CAB55253.1| (AL117211) hypothetical protein YPMT01.71 [Yersinia pestis]%3B contains Putative transposase%2C YhgA-like (Interpro|IPR006842) gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT117 YP_pMT118 pMT118 YP_pMT118 97591 97881 - hypothetical protein Best Blastp hit %3D gi|3883071| pir||T14988 hypothetical protein Y1071 Yersinia pestis plasmid pMT01 gb|AAC82731.1| (AF074611) unknown [Yersinia pestis]. similar to hypothetical protein%2C YPMT01.72c from Yersinia pestis plasmid pMT01 emb|CAB55254.1| (AL117211) [Yersinia pestis] (91 aa) which has a different putative start codons gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT118 YP_pMT119 pMT119 ymt ymt 98488 100251 + murine toxin Best Blastp hit %3D gi|3883069|pir||T14986 toxin protein Yersinia pestis plasmid pMT01 gb|AAC82729.1| (AF074611) murine toxin [Yersinia pestis]. similar to murine toxin from emb|CAB55256.1| (AL117211) murine toxin [Yersinia pestis] and gb|AAC13233.1| (AF053947) murine toxin [Yersinia pestis] (532 aa) which has a different putative start codon . Contains Phospholipase D/Transphosphatidylase (Interpro|IPR001736%2C Molecular Function: enzyme (GO:0003824)%2C Biological Process: metabolism (GO:0008152)) gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT119 YP_pMT120 pMT120 YP_pMT120 100496 100966 - hypothetical protein Best Blastp hit %3D gi|7467415|pir||T14985 hypothetical protein Y1068 Yersinia pestis plasmid pMT01%2C gi|5834759| emb|CAB55257.1| (AL117211) hypothetical protein YPMT01.75c [Yersinia pestis] gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT120 YP_pMT121 pMT121 YP_pMT121 101037 101345 + conserved hypothetical protein similar to YPMT01.76 (EMBL:AL117211) from Yersinia pestis CO92 pMT01 (102 aa) and ORFY1067 (EMBL:AF074611) from Y. pestis KIM5 pMT01 (102 aa). gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT121 YP_pMT122 pMT122 YP_pMT122 101236 101631 + hypothetical protein Best Blastp hit %3D gi|3883066|pir||T14983 hypothetical protein Y1066 Yersinia pestis plasmid pMT01 gb|AAC82726.1| (AF074611) unknown [Yersinia pestis]. similar to YPMT01.76A from Yersinia pestis plasmid pMT01 emb|CAB62376.1| (AL117211) hypothetical protein YPMT01.76A [Yersinia pestis] (123 aa) which has a different putative start codon gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT122 YP_pMT123 pMT123 YP_pMT123 101558 101758 - probable transposase Best Blastp hit %3D gi|3883065|pir||T14982 probable transposase Yersinia pestis plasmid pMT01 gb|AAC82725.1| (AF074611) transposase%2C incomplete [Yersinia pestis] gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT123 YP_pMT124 pMT124 YP_pMT124 101805 102128 + hypothetical protein Best Blastp hit %3D gi|3883064|pir||T14981 hypothetical protein Y1064 Yersinia pestis plasmid pMT01 gb|AAC82724.1| (AF074611) unknown [Yersinia pestis] gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT124 YP_pMT125 pMT125 YP_pMT125 102327 103391 - probable transposase Best Blastp hit %3D gi|3883063|pir||T14980 probable transposase Yersinia pestis plasmid pMT01 gb|AAC82723.1| (AF074611) transposase [Yersinia pestis]. similar to YPMT01.79c from Yersinia pestis plasmid pMT01 emb|CAB55261.1| (AL117211) probable transposase YPMT01.79c [Yersinia pestis] (340 aa) which has a different putative start codon%3B contains Transposase%2C IS111A/IS1328/IS1533 (Interpro|IPR002525). Contains Transposase IS116/IS110/IS902 (Interpro|IPR003346%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: transposase (GO:0004803)%2C Biological Process: DNA transposition (GO:0006313)) gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT125 YP_pMT126 pMT126 YP_pMT126 103818 105026 - transposase Best Blastp hit %3D gi|16120364|ref|NP_403677.1| (NC_003143) transposase for the IS285 insertion element [Yersinia pestis]%2C gi|22124269|ref|NP_667692.1| (NC _004088) putative transposase [Yersinia pestis KIM]%2C gi|2996347|gb|AAC13227.1| (AF053947) transposase [Yersinia pestis]%2C gi|3883062|gb|AAC82722.1| (AF074611) transposase [Yersinia pestis]%2C gi|5834763|emb|CAB55262.1| (AL117211) putative transposase [Yersinia pestis]%3B contains Transposase%2C mutator family (Interpro|IPR001207) gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT126 YP_pMT127 pMT127 YP_pMT127 105060 105782 - hypothetical protein%3B Best Blastp hit %3D gi|3883061|pir||T14978 hypothetical protein Y1061 Yersinia pestis plasmid pMT01 gb|AAC82721.1| (AF074611) unknown [Yersinia pestis] . The stop codon of this CDS locates in the IS285 element%2C so it might be a pseudogene. . Contains Transposase%2C mutator family (Interpro|IPR001207) gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT127 YP_pMT128 pMT128 YP_pMT128 106035 106640 + hypothetical protein%3B similar to the N-terminus of hypothetical protein Y1060 Yersinia pestis plasmid pMT01 gb|AAC82720.1| (AF074611) unknown [Yersinia pestis] (264 aa). This CDS has been disrputed by IS100 element and the C-terminal residues locates in 81724 to 81915. The rearrangement has been confirmed. gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pMT128 YP_pPCP01 pPCP01 YP_pPCP01 87 1109 + putative transposase similar to corresponding CDS from previously sequenced pPCP plasmid of Yersinia pestis KIM (AF053945) and CO92 (AL109969)%2C also many transposase entries for insertion sequence IS100 of Yersinia pestis. Contains IS21-like element transposase%2C HTH domain (Interpro|IPR007101) gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP01 YP_pPCP02 pPCP02 YP_pPCP02 1106 1888 + putative ATP-binding protein similar to corresponding CDS form previously sequenced pPCP plasmid of Yersinia pestis KIM (AF053945) and CO92 (AL109969)%2C also many ATP-binding protein entries for insertion sequence IS100 of Yersinia pestis. Contains Chaperonin clpA/B (Interpro|IPR001270). Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687%2C Molecular Function: ATP binding (GO:0005524)). Contains Bacterial chromosomal replication initiator protein%2C DnaA (Interpro|IPR001957%2C Molecular Function: DNA binding (GO:0003677)%2C Molecular Function: DNA replication origin binding (GO:0003688)%2C Molecular Function: ATP binding (GO:0005524)%2C Biological Process: DNA replication initiation (GO:0006270)%2C Biological Process: regulation of DNA replication (GO:0006275)). Contains AAA ATPase (Interpro|IPR003593%2C Molecular Function: nucleotide binding (GO:0000166)) gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP02 YP_pPCP03 pPCP03 rop rop 2925 3119 + putative replication regulatory protein Best Blastp hit %3Dgi|16082682|ref|NP_395229.1| (NC_003132) putative replication regulatory protein [Yersinia pestis]%2C gi|5763813|emb|CAB531 66.1| (AL109969) putative replication regulatory protein [Yersinia pestis]%3B similar to gb|AAK91579.1| (AY048853)%2C RNAI modulator protein Rom [Salmonella choleraesuis]%2C Contains Regulatory protein Rop (Interpro|IPR000769) gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP03 YP_pPCP04 pPCP04 YP_pPCP04 3486 3857 + conserved hypothetical protein Best Blastp hit %3D gi|321919|pir||JQ1541 hypothetical 16.9K protein - Salmonella typhi murium plasmid NTP16. gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP04 YP_pPCP05 pPCP05 pim pim 4343 4780 + pesticin immunity protein similar to many previously sequenced pesticin immunity protein entries of Yersinia pestis plasmid pPCP%2C e.g. gi| 16082683|%2Cref|NP_395230.1| (NC_003132)%2C gi|1200166|emb|CAA90861.1| (Z54145)%2C gi|1488655| emb|CAA63439.1| (X92856)%2C gi|2996219|gb|AAC62543.1| (AF053945)%2C and gi|5763814|emb|CAB531 67.1| (AL109969) gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP05 YP_pPCP06 pPCP06 pst pst 4815 5888 - pesticin Best Blastp hit %3D|16082684|ref|NP_395231.1| (NC_003132) pesticin [Yersinia pestis]%2C gi|984824|gb|AAA75369.1| (U31974) pesticin [Yersinia pestis]%2C gi|1488654|emb|CAA63438.1| (X92856) pesticin [Yersinia pestis]%2C gi|2996220|gb|AAC62544.1| (AF053945) pesticin [Yersinia pestis]%2C gi|5763815|emb|CAB53168.1| (AL1099 69) pesticin [Yersinia pestis] gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP06 YP_pPCP07 pPCP07 YP_pPCP07 6005 6421 + conserved hypothetical proteins Best Blastp hit %3D gi|16082685|ref|NP_395232.1| (NC_003132) hypothetical protein [Yersinia pestis]%2C gi|5763816|emb|CAB53169.1| (AL109969) hypothetical protein [Yersinia pestis] gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP07 YP_pPCP08 pPCP08 pla pla 6664 7602 + plasminogen activator similar to many previosly sequenced coagulase/fibrinolysin precursor (plasminogen activator) of Yersinia pestis plasmid pPCP from difference strains%2C e.g. gi|16082686|ref|NP_395233.1|%2C gi|116897|sp|P17811|%2C gi|96995|pir||A30916%2C gi|48630|emb|CAA33235.1| (X15136)%2C gi|2996221|gb|AAC62545.1| (AF053945)%2Cand gi|5763817|emb|CAB53170.1| (AL109969)%3B The 279th aa is T (Thr) in reference entries%2C and in this sequence it is I(Ile). Contains Omptin serine protease (Interpro|IPR000036%2C Biological Process: proteolysis and peptidolysis (GO:0006508)%2C Molecular Function: serine-type peptidase (GO:0008236)%2C Cellular Component: external outer membrane (sensu Gram-negative Bacteria) (GO:0009279)) gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP08 YP_pPCP09 pPCP09 YP_pPCP09 7789 8088 - putative transcriptional regulator Best Blastp hit %3D gi|16082687|ref|NP_395234.1| (NC_003132) putative transcriptional regulator [Yersinia pestis]%2C gi|5763818|emb|CAB53171.1| (AL109969) putative transcriptional regulator [Yersinia pestis]. gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP09 YP_pPCP10 pPCP10 YP_pPCP10 8088 8360 - conserved hypothetical protein Best Blastp hit %3D gi|16082688|ref|NP_395235.1| (NC_003132) hypothetical protein [ Yersinia pestis]%2C gi|5763819|emb|CAB53172.1| (AL109969) hypothetical protein [Yersinia pestis] gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=YP_pPCP10 YP_r1 16S_rRNA_1 YP_r1 12057 13545 + 16S ribosomal RNA rRNA gene11 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r1 YP_r10 5S_rRNA_4 YP_r10 3080482 3080597 - 5S ribosomal RNA rRNA gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r10 YP_r11 23S_rRNA_4 YP_r11 3080707 3083613 - 23S ribosomal RNA rRNA gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r11 YP_r12 16S_rRNA_4 YP_r12 3084105 3085593 - 16S ribosomal RNA rRNA gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r12 YP_r13 5S_rRNA_5 YP_r13 3435678 3435793 - 5S ribosomal RNA rRNA gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r13 YP_r14 5S_rRNA_6 YP_r14 3435925 3436040 - 5S ribosomal RNA rRNA gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r14 YP_r15 23S_rRNA_5 YP_r15 3436150 3439056 - 23S ribosomal RNA rRNA gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r15 YP_r16 16S_rRNA_5 YP_r16 3439608 3441096 - 16S ribosomal RNA rRNA gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r16 YP_r17 5S_rRNA_7 YP_r17 3501174 3501289 - 5S ribosomal RNA rRNA gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r17 YP_r18 23S_rRNA_6 YP_r18 3501399 3504305 - 23S ribosomal RNA rRNA gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r18 YP_r19 16S_rRNA_6 YP_r19 3504797 3506285 - 16S ribosomal RNA rRNA gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r19 YP_r2 23S_rRNA_1 YP_r2 14037 16943 + 23S ribosomal RNA rRNA gene13 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r2 YP_r20 5S_rRNA_8 YP_r20 3665547 3665662 - 5S ribosomal RNA rRNA gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r20 YP_r21 23S_rRNA_7 YP_r21 3665772 3668678 - 23S ribosomal RNA rRNA gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r21 YP_r22 16S_rRNA_7 YP_r22 3669230 3670718 - 16S ribosomal RNA rRNA gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r22 YP_r3 5S_rRNA_1 YP_r3 17053 17168 + 5S ribosomal RNA rRNA gene14 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r3 YP_r4 16S_rRNA_2 YP_r4 245028 246516 + 16S ribosomal RNA rRNA gene246 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r4 YP_r5 23S_rRNA_2 YP_r5 247068 249974 + 23S ribosomal RNA rRNA gene249 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r5 YP_r6 5S_rRNA_2 YP_r6 250084 250199 + 5S ribosomal RNA rRNA gene250 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r6 YP_r7 16S_rRNA_3 YP_r7 704161 705649 + 16S ribosomal RNA rRNA gene658 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r7 YP_r8 23S_rRNA_3 YP_r8 706201 709107 + 23S ribosomal RNA rRNA gene661 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r8 YP_r9 5S_rRNA_3 YP_r9 709217 709332 + 5S ribosomal RNA rRNA gene662 http://www.ncbi.nlm.nih.gov/gene/?term=YP_r9 YP_s1 YP_s1 spf spf 25663 25780 + RNA feature: spf Spot 42 RNA ncRNA gene22 http://www.ncbi.nlm.nih.gov/gene/?term=YP_s1 YP_s2 YP_s2 ffs ffs 856952 857071 - Bacterial small signal recognition particle RNA. similar to Escherichia coli 4.5S RNA%2C ffs gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=YP_s2 YP_s3 YP_s3 micF micF 980775 980916 - similar to regulatory antisense RNA affecting ompF expression gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=YP_s3 YP_s4 YP_s4 ssrA ssrA 1136978 1137341 - similar to Escherichia coli small stable RNA molecule%2C tmRNA [10Sa RNA] (D12501) tmRNA gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=YP_s4 YP_s5 YPs5 csrB csrB 3125721 3126042 - similar to Escherichia coli regulatory RNA csrB ncRNA gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=YP_s5 YP_s6 YP_s6 ssrS ssrS 4106951 4107132 + similar to Escherichia coli 6S RNA%2C ssrS ncRNA gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=YP_s6 YP_s7 YP_s7 rnpB rnpB 4327256 4327632 + similar to RNA component of Escherichia coli RNase P%2C involved in tRNA and 4.5S RNA-processing gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=YP_s7 YP_t1 tRNA-Glu_1 YP_t1 13709 13784 + tRNA-Glu Cove score 56.95 tRNA gene12 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t1 YP_t11 tRNA-Met_1 YP_t11 624619 624695 + tRNA-Met Cove score 86.07 tRNA gene586 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t11 YP_t12 tRNA-Leu_2 YP_t12 690159 690243 + tRNA-Leu Cove score 74.86 tRNA gene646 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t12 YP_t13 tRNA-Ile_2 YP_t13 705779 705855 + tRNA-Ile Cove score 94.77 tRNA gene659 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t13 YP_t14 tRNA-Ala_2 YP_t14 705907 705982 + tRNA-Ala Cove score 93.97 tRNA gene660 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t14 YP_t15 tRNA-Arg_3 YP_t15 927238 927314 + tRNA-Arg Cove score 94.70 tRNA gene852 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t15 YP_t16 tRNA-Pro_1 YP_t16 946731 946807 + tRNA-Pro Cove score 79.79 tRNA gene879 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t16 YP_t17 tRNA-Thr_1 YP_t17 978845 978920 - tRNA-Thr Cove score 93.97 tRNA gene914 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t17 YP_t18 tRNA-Ser_2 YP_t18 978926 979013 - tRNA-Ser Cove score 68.39 tRNA gene915 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t18 YP_t19 tRNA-Lys_1 YP_t19 1109581 1109650 - tRNA-Lys Cove score 42.24 tRNA gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t19 YP_t2 tRNA-Ile_1 YP_t2 246646 246722 + tRNA-Ile Cove score 94.77 tRNA gene247 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t2 YP_t20 tRNA-Lys_2 YP_t20 1109679 1109754 - tRNA-Lys Cove score 95.27 tRNA gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t20 YP_t21 tRNA-Lys_3 YP_t21 1109782 1109857 - tRNA-Lys Cove score 95.27 tRNA gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t21 YP_t22 tRNA-Met_2 YP_t22 1172313 1172389 + tRNA-Met Cove score 94.35 tRNA gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t22 YP_t23 tRNA-Leu_3 YP_t23 1172397 1172481 + tRNA-Leu Cove score 76.99 tRNA gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t23 YP_t24 tRNA-Gln_1 YP_t24 1172511 1172585 + tRNA-Gln Cove score 75.01 tRNA gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t24 YP_t25 tRNA-Gln_2 YP_t25 1172669 1172743 + tRNA-Gln Cove score 75.01 tRNA gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t25 YP_t26 tRNA-Met_3 YP_t26 1172776 1172852 + tRNA-Met Cove score 94.35 tRNA gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t26 YP_t27 tRNA-Gln_3 YP_t27 1172858 1172932 + tRNA-Gln Cove score 74.52 tRNA gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t27 YP_t28 tRNA-Ser_3 YP_t28 1466614 1466701 + tRNA-Ser Cove score 74.25 tRNA gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t28 YP_t29 tRNA-Asn_1 YP_t29 1623043 1623118 - tRNA-Asn Cove score 87.13 tRNA gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t29 YP_t3 tRNA-Ala_1 YP_t3 246774 246849 + tRNA-Ala Cove score 93.97 tRNA gene248 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t3 YP_t30 tRNA-Asn_2 YP_t30 1633790 1633865 - tRNA-Asn Cove score 87.13 tRNA gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t30 YP_t31 tRNA-Leu_4 YP_t31 1673973 1674058 - tRNA-Leu Cove score 73.10 tRNA gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t31 YP_t32 tRNA-Cys_1 YP_t32 1674069 1674142 - tRNA-Cys Cove score 58.23 tRNA gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t32 YP_t33 tRNA-Gly_2 YP_t33 1674195 1674270 - tRNA-Gly Cove score 93.74 tRNA gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t33 YP_t34 tRNA-Lys_4 YP_t34 1680719 1680794 - tRNA-Lys Cove score 96.54 tRNA gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t34 YP_t35 tRNA-Asn_3 YP_t35 1828031 1828106 - tRNA-Asn Cove score 87.13 tRNA gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t35 YP_t36 tRNA-Ser_4 YP_t36 2081356 2081445 - tRNA-Ser Cove score 59.10 tRNA gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t36 YP_t37 tRNA-Ser_5 YP_t37 2089764 2089853 - tRNA-Ser Cove score 62.70 tRNA gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t37 YP_t38 tRNA-Tyr_1 YP_t38 2189908 2189992 - tRNA-Tyr Cove score 66.93 tRNA gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t38 YP_t39 tRNA-Val_1 YP_t39 2425287 2425363 + tRNA-Val Cove score 96.37 tRNA gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t39 YP_t4 tRNA-Ser_1 YP_t4 407609 407701 + tRNA-Ser Cove score 73.90 tRNA gene384 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t4 YP_t40 tRNA-Val_2 YP_t40 2425423 2425499 + tRNA-Val Cove score 83.12 tRNA gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t40 YP_t41 tRNA-Arg_4 YP_t41 2701189 2701263 - tRNA-Arg Cove score 71.72 tRNA gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t41 YP_t42 tRNA-Lys_5 YP_t42 2892010 2892085 - tRNA-Lys Cove score 95.27 tRNA gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t42 YP_t43 tRNA-Val_3 YP_t43 2892285 2892360 - tRNA-Val Cove score 90.85 tRNA gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t43 YP_t44 tRNA-Val_4 YP_t44 2892405 2892480 - tRNA-Val Cove score 90.85 tRNA gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t44 YP_t45 tRNA-Val_5 YP_t45 2892517 2892592 - tRNA-Val Cove score 90.85 tRNA gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t45 YP_t46 tRNA-Ala_3 YP_t46 2894514 2894589 + tRNA-Ala Cove score 86.95 tRNA gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t46 YP_t47 tRNA-Asp_1 YP_t47 3072909 3072985 - tRNA-Asp Cove score 94.51 tRNA gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t47 YP_t48 tRNA-Asp_2 YP_t48 3080280 3080356 - tRNA-Asp Cove score 90.47 tRNA gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t48 YP_t49 tRNA-Glu_2 YP_t49 3083866 3083941 - tRNA-Glu Cove score 56.95 tRNA gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t49 YP_t5 tRNA-Arg_1 YP_t5 407710 407786 + tRNA-Arg Cove score 85.08 tRNA gene385 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t5 YP_t50 tRNA-Met_4 YP_t50 3137997 3138073 + tRNA-Met Cove score 86.07 tRNA gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t50 YP_t51 tRNA-Met_5 YP_t51 3138197 3138273 + tRNA-Met Cove score 86.07 tRNA gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t51 YP_t52 tRNA-Met_6 YP_t52 3291134 3291210 - tRNA-Met Cove score 93.29 tRNA gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t52 YP_t53 tRNA-Thr_2 YP_t53 3435834 3435909 - tRNA-Thr Cove score 88.70 tRNA gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t53 YP_t54 tRNA-Ala_4 YP_t54 3439275 3439350 - tRNA-Ala Cove score 93.97 tRNA gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t54 YP_t55 tRNA-Ile_3 YP_t55 3439402 3439478 - tRNA-Ile Cove score 94.77 tRNA gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t55 YP_t6 tRNA-Arg_2 YP_t6 407866 407942 + tRNA-Arg Cove score 80.38 tRNA gene386 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t6 YP_t60 tRNA-Glu_3 YP_t60 3504558 3504633 - tRNA-Glu Cove score 56.95 tRNA gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t60 YP_t61 tRNA-Asp_3 YP_t61 3506403 3506479 + tRNA-Asp Cove score 90.47 tRNA gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t61 YP_t62 tRNA-Trp_1 YP_t62 3506488 3506563 + tRNA-Trp Cove score 82.06 tRNA gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t62 YP_t63 tRNA-Arg_5 YP_t63 3563835 3563911 + tRNA-Arg Cove score 91.00 tRNA gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t63 YP_t64 tRNA-His_1 YP_t64 3563995 3564070 + tRNA-His Cove score 84.86 tRNA gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t64 YP_t65 tRNA-Leu_5 YP_t65 3564087 3564173 + tRNA-Leu Cove score 67.09 tRNA gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t65 YP_t66 tRNA-Pro_2 YP_t66 3564249 3564325 + tRNA-Pro Cove score 92.73 tRNA gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t66 YP_t67 tRNA-Ala_5 YP_t67 3668897 3668972 - tRNA-Ala Cove score 93.97 tRNA gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t67 YP_t68 tRNA-Ile_4 YP_t68 3669024 3669100 - tRNA-Ile Cove score 94.77 tRNA gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t68 YP_t69 tRNA-Pro_3 YP_t69 3776472 3776548 - tRNA-Pro Cove score 92.73 tRNA gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t69 YP_t7 tRNA-Phe_1 YP_t7 529782 529857 - tRNA-Phe Cove score 84.11 tRNA gene496 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t7 YP_t70 tRNA-SeC(p) YP_t70 3806782 3806872 - tRNA-Sec Cove score 71.03 tRNA gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t70 YP_t71 tRNA-Phe_2 YP_t71 3955266 3955341 - tRNA-Phe Cove score 84.11 tRNA gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t71 YP_t72 tRNA-Gly_4 YP_t72 4076418 4076491 - tRNA-Gly Cove score 78.87 tRNA gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t72 YP_t73 tRNA-Leu_6 YP_t73 4277617 4277703 + tRNA-Leu Cove score 64.60 tRNA gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t73 YP_t8 tRNA-Gly_1 YP_t8 559750 559825 + tRNA-Gly Cove score 93.74 tRNA gene522 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t8 YP_t9 tRNA-Leu_1 YP_t9 624472 624558 + tRNA-Leu Cove score 68.10 tRNA gene585 http://www.ncbi.nlm.nih.gov/gene/?term=YP_t9